Modified sequence	Experiment	N duplicates	Sequence	Length	Missed cleavages	Proteins	Leading proteins	Gene names	Protein names	Phospho (STY)	All Phospho (STY) Probabilities	Max Score	Min PEP	Intensity	Reporter intensity corrected 1	Reporter intensity corrected 2	Reporter intensity corrected 3	Reporter intensity corrected 4	Reporter intensity corrected 5	Reporter intensity corrected 6	Reporter intensity corrected 7	Reporter intensity corrected 8	Reporter intensity corrected 9	Reporter intensity corrected 10	Phosphoproteome	Fullproteome	TMT Channel Normal 1	TMT Channel Normal 2	TMT Channel Normal 3	TMT Channel Normal 4	TMT Channel Normal 5	TMT Channel Normal 6	TMT Channel Normal 7	TMT Channel Normal 8	TMT Channel Normal 9	TMT Channel Normal 10	TMT Channel Ratio 1	TMT Channel Ratio 2	TMT Channel Ratio 3	TMT Channel Ratio 4	TMT Channel Ratio 5	TMT Channel Ratio 6	TMT Channel Ratio 7	TMT Channel Ratio 8	TMT Channel Ratio 9	TMT Channel Ratio 10	Curve signal	Log EC50	Curve slope	Curve top	Curve bottom	R2	Curve RMSE	Log EC50 error	Curve slope error	Curve top error	Curve bottom error	EC50	pEC50	Curve effect size	Regulation
(ac)AAAAAAAAAAGAAGGRGS(ph)GPGR	ddPTM_K562_Methotrexat_30min_R1	1	AAAAAAAAAAGAAGGRGSGPGR	22	1	Q86U42-2;Q86U42	Q86U42-2	PABPN1	Polyadenylate-binding protein 2	1	AAAAAAAAAAGAAGGRGS(1)GPGR	125.51	2.5138e-22	11818000.0	113.95	0.0	221.53	186.7	56.762	0.0	120.02	115.78	168.07	146.14	True	False	108.94089443987747	0.0	175.03388038657238	170.33230087044987	64.2271979203122	0.0	146.9375401878311	111.70795177527128	160.25646238438824	119.67262987444637	0.910324228306606	0.0	1.4626057818751692	1.4233187743024676	0.5366907870888746	0.0	1.2278291230165954	0.9334461179007165	1.339123762488717	1.0	6.902949423430125														
(ac)AAAAAAAGDS(ph)DSWDADAFSVEDPVR	ddPTM_K562_Methotrexat_30min_R1	5	AAAAAAAGDSDSWDADAFSVEDPVR	25	0	O75822-2;O75822-3;O75822	O75822-2	EIF3J	Eukaryotic translation initiation factor 3 subunit J	1	AAAAAAAGDS(0.994)DS(0.006)WDADAFSVEDPVR;AAAAAAAGDS(0.999)DS(0.001)WDADAFSVEDPVR;AAAAAAAGDS(0.957)DS(0.043)WDADAFSVEDPVR;AAAAAAAGDS(0.5)DS(0.5)WDADAFSVEDPVR;AAAAAAAGDS(0.992)DS(0.008)WDADAFSVEDPVR	205.24	0.0	0.0	402.471	291.81	250.255	298.92	341.008	311.46000000000004	230.91	326.33	176.56	182.29	True	False	384.77885674516824	340.0266425780892	197.7298954369236	272.71414770324003	385.8565291640506	371.6452369760974	282.6974454655234	314.8527889343954	168.3517641374879	149.2755145737843	2.577642139394393	2.2778460590066825	1.3245969776187851	1.826918155210526	2.5848614909535508	2.48965972776734	1.8937964894824793	2.109205852234856	1.1277922211031772	1.0	7.221833731670694	-9.782600522427249	4.701042731062469	1.0127478436081416	2.1256318659560987	0.5756907818897206	0.36852412171929155	0.1493849194512112	7.788248722287241	0.35892759491556153	0.10174418115752386	1.6496791200177625e-10	9.782600522427249	1.112884022347957	
(ac)AAAAAAAGDS(ph)DSWDADAFSVEDPVRK	ddPTM_K562_Methotrexat_30min_R1	8	AAAAAAAGDSDSWDADAFSVEDPVRK	26	1	O75822-2;O75822-3;O75822	O75822-2	EIF3J	Eukaryotic translation initiation factor 3 subunit J	1	AAAAAAAGDS(0.989)DS(0.011)WDADAFSVEDPVRK;AAAAAAAGDS(0.996)DS(0.004)WDADAFSVEDPVRK;AAAAAAAGDS(0.987)DS(0.013)WDADAFSVEDPVRK;AAAAAAAGDS(0.944)DS(0.056)WDADAFSVEDPVRK;AAAAAAAGDS(0.878)DS(0.122)WDADAFSVEDPVRK;AAAAAAAGDS(0.997)DS(0.003)WDADAFSVEDPVRK;AAAAAAAGDS(0.883)DS(0.116)WDADAFSVEDPVRK;AAAAAAAGDS(0.5)DS(0.5)WDADAFSVEDPVRK	137.23	4.3467e-28	364882100.0	17228.95	14369.3	19988.22	18176.85	13728.650000000001	14054.04	13798.57	17716.440000000002	16758.77	19393.019999999997	True	False	16471.58598736224	16743.582588661568	15792.965777188161	16583.31378188022	15534.208109803989	16769.784326306923	16893.25057415099	17093.342763426208	15979.658440611729	15880.756155794015	1.0372041372446024	1.0543315711420174	0.9944719018575306	1.0442395575622436	0.9781781142793009	1.0559814760576467	1.063756058491432	1.0763557223432203	1.0062278070293038	1.0	13.954991987007796														
(ac)AAAAAAAGDSDS(ph)WDADAFSVEDPVR	ddPTM_K562_Methotrexat_30min_R1	1	AAAAAAAGDSDSWDADAFSVEDPVR	25	0	O75822-2;O75822-3;O75822	O75822-2	EIF3J	Eukaryotic translation initiation factor 3 subunit J	1	AAAAAAAGDS(0.457)DS(0.543)WDADAFSVEDPVR	67.992	6.2296e-05	1301100.0	0.0	173.63	172.53	117.36	0.0	0.0	0.0	76.89399999999999	0.0	0.0	True	False	0.0	202.31940629462187	136.3183107619525	107.07123101315477	0.0	0.0	0.0	74.18959443606589	0.0	0.0											0.0														
(ac)AAAPQAPGRGS(ph)LRK	ddPTM_K562_Methotrexat_30min_R1	2	AAAPQAPGRGSLRK	14	2	Q5VUC9;Q5VUC3;P78345	Q5VUC9	RPP38	Ribonuclease P protein subunit p38	1	AAAPQAPGRGS(1)LRK;AAAPQAPGRGS(1)LRK	67.952	0.0083715	16308100.0	2855.5	2141.14	7468.799999999999	2797.3	2753.9	2427.6000000000004	2034.01	2936.8999999999996	2490.8	2816.3	True	False	2729.9756390791576	2494.926991842808	5901.200947191041	2552.0650520884287	3116.0861201639814	2896.699342718724	2490.188519558827	2833.6075623492334	2375.0032516632023	2306.240779495028	1.1837340070263218	1.0818154869280798	2.5587965487641586	1.1065908966570377	1.3511538551695699	1.2560264168743829	1.0797608565850074	1.2286694379628813	1.0298158252943694	1.0	11.171327427855331														
(ac)AAGGDHGS(ph)PDSYRSPLASR	ddPTM_K562_Methotrexat_30min_R1	1	AAGGDHGSPDSYRSPLASR	19	1	B4DEP1;A0A1W2PRX2;A0A096LP72;A0A096LNY4;A0A096LNY5;A0A1B0GTG9;A0A1B0GWF8;A0A1B0GWJ0;A0A1B0GTJ7;A0A0A6YY92;P30566-2;P30566	B4DEP1	ADSL	Adenylosuccinate lyase	1	AAGGDHGS(0.985)PDS(0.005)Y(0.004)RS(0.006)PLASR	51.463	0.010846	25187000.0	0.0	0.0	0.0	0.0	0.0	62.896	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	75.04976184694223	0.0	0.0	0.0	0.0											0.0														
(ac)AALGHLAGEAAAAPGPGT(ph)PCASR	ddPTM_K562_Methotrexat_30min_R1	3	AALGHLAGEAAAAPGPGTPCASR	23	0	A0A3B3IRR6;A0A3B3IT54;A0A3B3ITA3;Q9H7E9;Q9H7E9-2	A0A3B3IRR6	C8orf33	UPF0488 protein C8orf33	1	AALGHLAGEAAAAPGPGT(0.996)PCAS(0.004)R;AALGHLAGEAAAAPGPGT(0.997)PCAS(0.003)R;AALGHLAGEAAAAPGPGT(0.995)PCAS(0.005)R	81.329	7.3326e-22	97611000.0	0.0	0.0	0.0	66.803	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	60.946484708348486	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)AALHTT(ph)PDSPAAQLER	ddPTM_K562_Methotrexat_30min_R1	2	AALHTTPDSPAAQLER	16	0	A6NFI3	A6NFI3	ZNF316	Zinc finger protein 316	1	AALHT(0.096)T(0.569)PDS(0.335)PAAQLER;AALHT(0.178)T(0.52)PDS(0.302)PAAQLER	153.41	5.202199999999999e-110	140605800.0	75.419	140.44	192.72	0.0	146.67	137.68	68.377	0.0	0.0	0.0	True	False	72.10367106416074	163.6453229281616	152.2707056746275	0.0	165.9596758213627	164.28471144567231	83.71228283138919	0.0	0.0	0.0											0.0														
(ac)AALHTTPDS(ph)PAAQLER	ddPTM_K562_Methotrexat_30min_R1	2	AALHTTPDSPAAQLER	16	0	A6NFI3	A6NFI3	ZNF316	Zinc finger protein 316	1	AALHT(0.063)T(0.208)PDS(0.73)PAAQLER;AALHT(0.323)T(0.021)PDS(0.656)PAAQLER	151.73	1.2434999999999996e-130	322870000.0	0.0	0.0	130.52	0.0	0.0	0.0	0.0	0.0	0.0	70.663	True	False	0.0	0.0	103.12563566133448	0.0	0.0	0.0	0.0	0.0	0.0	57.865245961530086	0.0	0.0	1.7821687948910536	0.0	0.0	0.0	0.0	0.0	0.0	1.0	5.854625216281532	-12.78145787739458	7.6715648552144815	1.016643708252174	0.20966691704600646	0.16978893162395392	0.5314549731308209	0.14799725734898808	0.004216034826674602	0.5033884203399428	0.12991375203702477	1.654025202357089e-13	12.78145787739458	-0.8069767912061675	
(ac)AALSGVRWLT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	AALSGVRWLTR	11	1	A0A087X2E5;A0A087WZN1;O43837-2;O43837	A0A087X2E5	IDH3B	Isocitrate dehydrogenase [NAD] subunit, mitochondrial;Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	1	AALS(0.006)GVRWLT(0.994)R	50.467	0.03075	0.0	178.51	143.55	104.1	122.44	154.07	0.0	153.35	126.89	0.0	185.95	True	False	170.66291414183874	167.26919756720017	82.25083261067209	111.7058753003636	174.33290552803814	0.0	187.74264112484505	122.42720677806331	0.0	152.27265310765918	1.1207719223305144	1.0984848175524873	0.5401549847070666	0.7335911801667091	1.1448733700382958	0.0	1.232937348192837	0.8039999584922536	0.0	1.0	7.250513058924381	-6.74703008530476	24.051698834484302	0.6886454736802649	1.1096289921559632	0.15550211381629242	0.39842552344802273	276.99987946602874	462349.63248546474	0.09768618730721683	0.2555701679490951	1.790481815947809e-07	6.74703008530476	0.42098351847569837	
(ac)AAPEEHDS(ph)PTEASQPIVEEEETKTFK	ddPTM_K562_Methotrexat_30min_R1	1	AAPEEHDSPTEASQPIVEEEETKTFK	26	1	F5H1N9;Q9H0S4-2;Q9H0S4	F5H1N9	DDX47	Probable ATP-dependent RNA helicase DDX47	1	AAPEEHDS(0.453)PT(0.453)EAS(0.093)QPIVEEEETKTFK	53.266000000000005	0.00042394	10141000.0	852.96	565.0	1123.3	1062.1	552.4	624.37	642.17	513.47	736.08	1374.6	True	False	815.4648997054658	658.3566466420624	887.5346808027662	968.9873420166306	625.050282428041	745.0206659306682	786.1929693586032	495.4109690624335	701.8598014630833	1125.6466198536614	0.7244412991809805	0.584869740671945	0.7884665268378359	0.8608273013271277	0.5552810903561368	0.6618601724469478	0.6984367522560602	0.4401123410532152	0.623516998215948	1.0	10.136538270338225	-12.142298999067487	4.905549881394783	1.0000211524395473	0.6589203115283886	0.44723267138199596	0.11347543517019584	2.7586529933160887e-05	4.823279011139559e-06	0.1154603751490628	0.028001519419733785	7.206111886033715e-13	12.142298999067487	-0.34110084091115866	
(ac)AARDS(ph)DS(ph)EEDLVSYGTGLEPLEEGERPK	ddPTM_K562_Methotrexat_30min_R1	1	AARDSDSEEDLVSYGTGLEPLEEGERPK	28	2	K7EQ19;Q9BRR8	K7EQ19	GPATCH1	G patch domain-containing protein 1	2	AARDS(0.968)DS(0.973)EEDLVS(0.042)Y(0.016)GT(0.002)GLEPLEEGERPK	60.472	0.00037599	6627700.0	549.61	408.6	637.62	715.62	317.92	352.68	439.62	541.41	688.32	704.32	True	False	525.4498024844326	476.11420498751625	503.7922755928602	652.8827056717264	359.7320524792233	420.8304185986326	538.2159758154835	522.3683034258909	656.3201534385798	576.7608229996586	0.9110358774918795	0.8254967848046747	0.8734856035690872	1.131981715186839	0.6237109701874398	0.7296445975819715	0.9331701363076148	0.9056931098563886	1.1379416341511261	1.0	9.171829361316588	-9.623265577800927	4.7208129433001575	1.0667922100039775	0.8602876932305944	0.28622190532295355	0.12889929399877878	0.28057983418408444	10.337614273021849	0.09823012022997436	0.03430184211804479	2.3808630894567167e-10	9.623265577800927	-0.2065045167733831	
(ac)AASAAAAS(ph)AAAASAASGSPGPGEGSAGGEKR	ddPTM_K562_Methotrexat_30min_R1	1	AASAAAASAAAASAASGSPGPGEGSAGGEKR	31	1	Q13263;Q13263-2	Q13263	TRIM28	Transcription intermediary factor 1-beta	1	AASAAAAS(0.449)AAAAS(0.372)AAS(0.016)GS(0.162)PGPGEGSAGGEKR	101.04	2.051e-35	121770000.0	1066.4	1006.4	1244.0	1058.6	932.71	752.86	851.74	990.93	938.61	1119.5	True	False	1019.5223328713062	1172.6904941249056	982.901400265861	965.7941815825292	1055.377713474762	898.3395399403603	1042.7643766004278	956.0784302355288	894.9742259690048	916.7477018232024	1.1121078687666284	1.279185638308873	1.0721612918266323	1.0535005210940638	1.151219371890277	0.9799201439542935	1.1374605843315526	1.0429024565145966	0.9762492168664343	1.0	9.840380934052353	-6.624714833962145	0.2789260667754835	0.9922228877205611	1.310207173834604	0.38421981531894556	0.06948072350232545	7.235824446454587	0.5501643032793776	0.08859814352903413	0.7791498591439591	2.3729313061727923e-07	6.624714833962145	0.31798428611404284	
(ac)AASAAAASAAAAS(ph)AASGSPGPGEGSAGGEKR	ddPTM_K562_Methotrexat_30min_R1	2	AASAAAASAAAASAASGSPGPGEGSAGGEKR	31	1	Q13263;Q13263-2	Q13263	TRIM28	Transcription intermediary factor 1-beta	1	AASAAAAS(0.055)AAAAS(0.573)AAS(0.371)GS(0.001)PGPGEGSAGGEKR;AASAAAAS(0.065)AAAAS(0.897)AAS(0.004)GS(0.034)PGPGEGSAGGEKR	136.26	1.8979e-50	486144000.0	2199.97	2112.2	3338.2	2709.0	2367.8	2302.8999999999996	2242.2	2418.87	2560.6	2863.8999999999996	True	False	2103.261952969699	2461.2051487386984	2637.5574392021663	2471.5061759938326	2679.2072026305486	2747.902832570006	2745.070426671848	2333.796971071433	2441.558264898342	2345.219958241596	0.8968292912476692	1.0494559966921253	1.1246524787294407	1.0538483468505546	1.1424119060624789	1.1717036702307166	1.1704959345178236	0.9951292469902363	1.0410785804197993	1.0	11.195507524154367	-6.293257841231746	2.9688157463542377	1.093957417311118	0.8711977675265669	0.4553496790769247	0.06191793243112147	0.32019490672273304	4.291070941598536	0.01673643641513629	0.16318269382761585	5.090285703649633e-07	6.293257841231746	-0.2227596497845511	
(ac)AASAAAASAAAASAAS(ph)GSPGPGEGSAGGEKR	ddPTM_K562_Methotrexat_30min_R1	1	AASAAAASAAAASAASGSPGPGEGSAGGEKR	31	1	Q13263;Q13263-2	Q13263	TRIM28	Transcription intermediary factor 1-beta	1	AASAAAAS(0.007)AAAAS(0.002)AAS(0.983)GS(0.008)PGPGEGSAGGEKR	92.266	8.072199999999999e-25	10546000.0	700.02	602.85	1164.1	817.63	662.98	656.85	615.41	666.45	894.81	903.93	True	False	669.2479589802806	702.4607158020666	919.7713183677558	745.9496473524694	750.1734906664421	783.776966248474	753.4313581652491	643.010575752544	853.2104784088439	740.2195177392113	0.9041209302671551	0.9489897239504463	1.2425656123968931	1.0077411220265566	1.0134473256766214	1.0588439611026421	1.0178485437217186	0.8686755217106891	1.1526452058637027	1.0	9.53180936617797	-10.866493584109678	12.740312403662783	0.9999978640761078	1.0236101661980963	0.004633527671955795	0.10491515016459252	0.0	0.0	0.10077482829900992	0.024441485969429515	1.359898253094446e-11	10.866493584109678	0.023612302121988504	
(ac)AASAAAASAAAASAASGS(ph)PGPGEGSAGGEKR	ddPTM_K562_Methotrexat_30min_R1	3	AASAAAASAAAASAASGSPGPGEGSAGGEKR	31	1	Q13263;Q13263-2	Q13263	TRIM28	Transcription intermediary factor 1-beta	1	AASAAAAS(0.018)AAAAS(0.006)AAS(0.017)GS(0.958)PGPGEGSAGGEKR;AASAAAAS(0.097)AAAAS(0.212)AAS(0.212)GS(0.478)PGPGEGS(0.001)AGGEKR;AAS(0.001)AAAAS(0.03)AAAAS(0.076)AAS(0.255)GS(0.636)PGPGEGS(0.002)AGGEKR	82.198	4.3215e-24	723392000.0	3550.93	3137.3399999999997	5296.9	4751.5	3158.3900000000003	3346.8	3042.7200000000003	3714.66	3290.1400000000003	4297.200000000001	True	False	3394.8353689635273	3655.732109338068	4185.15307642141	4334.943372179661	3573.773645036026	3993.521733486172	3725.1274144335734	3584.01330231067	3137.18210953395	3518.935439280631	0.9647336325265254	1.0388744472349292	1.1893236317165776	1.2318905666157505	1.015583748750618	1.134866439693068	1.058594986668779	1.0184936223335042	0.8915145400267072	1.0	11.780923330354074	-9.356517926007893	2.314622421159803	0.9479865143544478	1.0991499895648624	0.3447210228134704	0.07963035075502115	0.36517732355489374	3.671263262755616	0.061294280798753965	0.023711484497040112	4.4002978472197333e-10	9.356517926007893	0.15116347521041462	
(ac)ACS(ph)PDAVVS(ph)PSSAFLR	ddPTM_K562_Methotrexat_30min_R1	1	ACSPDAVVSPSSAFLR	16	0	Q93100-4;Q93100-2;I3L3F2;H3BV13;H3BQ89	Q93100-4	PHKB	Phosphorylase b kinase regulatory subunit beta	2	ACS(1)PDAVVS(0.74)PS(0.182)S(0.078)AFLR	71.263	0.0054663	4598600.0	74.569	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	189.31	True	False	71.29103604639951	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	155.0241245485935	0.45987059274798736	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	7.276348932102532	-12.81195481615868	2.5838808490655727	1.3134130402160522	0.04057681200776817	0.8107102256612049	0.13746967007590882	19940931.707821768	13542367.628016923	39021365.49057526	0.034926649018546	1.5418608592530127e-13	12.81195481615868	-1.2728362282082841	
(ac)ACS(ph)PDAVVSPSSAFLR	ddPTM_K562_Methotrexat_30min_R1	2	ACSPDAVVSPSSAFLR	16	0	Q93100-4;Q93100-2;I3L3F2;H3BV13;H3BQ89	Q93100-4	PHKB	Phosphorylase b kinase regulatory subunit beta	1	ACS(0.999)PDAVVSPSSAFLR;ACS(1)PDAVVSPSSAFLR	142.19	9.7741e-07	25898000.0	56.425	0.0	114.23	0.0	295.40999999999997	131.27	0.0	55.118	0.0	112.29	True	False	53.94462456138731	0.0	90.25468404531287	0.0	334.26159292553854	156.63606966497247	0.0	53.179468698820195	0.0	91.95319288765285	0.5866530880259494	0.0	0.9815285495913645	0.0	3.635127638622998	1.7034326350836808	0.0	0.5783319429026694	0.0	1.0	6.522827765046149														
(ac)ADAWEEIRR	ddPTM_K562_Methotrexat_30min_R1	1	ADAWEEIRR	9	1	O94874-3;O94874	O94874-3	UFL1	E3 UFM1-protein ligase 1	0		86.794	0.0026284000000000004	3684100.0	442.34	172.24	396.8	286.54	377.46	247.16	252.3	278.3	272.51	347.18	False	True	422.8952632429608	200.69973242058205	313.51710259284044	261.41948308205	427.10260609212247	294.9201719996541	308.8846974620047	268.51203125805836	259.8410695803513	284.302337757016	1.4874842978055134	0.705937678894901	1.1027594956352182	0.9195122528520212	1.5022831309152063	1.0373469818307044	1.0864655559955276	0.9444594560018951	0.9139603691983322	1.0	8.15128215181017	-9.186772738889504	2.9526102496358533	0.9439079977739251	1.1111964851664384	0.10376860316554182	0.22478157350966577	0.6928182976113472	11.727611178765216	0.12559919557908536	0.062335233074670815	6.504699844660646e-10	9.186772738889504	0.16728848739251334	
(ac)ADEAALALQPGGS(ph)PSAAGADR	ddPTM_K562_Methotrexat_30min_R1	2	ADEAALALQPGGSPSAAGADR	21	0	Q96EB6;Q96EB6-2	Q96EB6	SIRT1	NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment	1	ADEAALALQPGGS(0.938)PS(0.062)AAGADR;ADEAALALQPGGS(0.729)PS(0.271)AAGADR	108.37	3.1793000000000003e-17	29618000.0	0.0	0.0	323.0	250.37699999999998	335.33000000000004	143.66	188.73	312.12	158.09	329.64	True	False	0.0	0.0	255.20671405616784	228.42683714537023	379.43177264046903	171.4202618120663	231.05750674595384	301.14256268869997	150.74043040606847	269.93900172309077	0.0	0.0	0.9454236417380115	0.8462164996064384	1.4056204187555614	0.6350333250024865	0.855961922030732	1.1155948594550205	0.558424049299483	1.0	8.076489627222042	-6.760734705559362	24.999999999999996	0.9266161780879736	1.6959267854219715e-05	0.7292672160046823	0.2242630338871697	8.378448050000097	297188.8807600366	0.056315406907075066	0.13214341862242807	1.734863438061202e-07	6.760734705559362	-0.9265992188201194	
(ac)ADEAALALQPGGSPS(ph)AAGADREAASSPAGEPLR	ddPTM_K562_Methotrexat_30min_R1	2	ADEAALALQPGGSPSAAGADREAASSPAGEPLR	33	1	Q96EB6;Q96EB6-2	Q96EB6	SIRT1	NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment	1	ADEAALALQPGGS(0.129)PS(0.867)AAGADREAAS(0.003)S(0.001)PAGEPLR;ADEAALALQPGGS(0.202)PS(0.779)AAGADREAAS(0.012)S(0.007)PAGEPLR	65.899	5.0923e-10	175634000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	73.329	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	60.04840752746189	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	5.908054081322898														
(ac)ADEELEALRR	ddPTM_K562_Methotrexat_30min_R1	1	ADEELEALRR	10	1	O14737;Q3HM38;X6R2P6;K7ESJ4;O14737-2	O14737	PDCD5	Programmed cell death protein 5	0		85.161	2.5721e-05	35283000.0	330.16	276.17	373.25	297.12	259.28	281.66	455.61	283.58	304.94	251.62	False	True	315.64656172242144	321.80239841263443	294.9099257630486	271.07195090855964	293.37986464146	336.08680872885003	557.7921403514224	273.60633066532574	290.76340595879896	206.04917975234852	1.531899142242636	1.5617747122284604	1.4312598871662687	1.3155691822426194	1.4238341787823405	1.6310999594018978	2.707082556804329	1.3278690601640564	1.411135954572927	1.0	7.6868449102746	-8.347003960113357	5.784162730605878	1.7078470530565375	1.450743147432975	0.014490991292188005	0.4211171054038092	0.6840133858580179	36.52046501897027	0.15247187993736427	0.13418415950865498	4.497757535952877e-09	8.347003960113357	-0.25710390562356245	
(ac)ADFDTYDDR	ddPTM_K562_Methotrexat_30min_R1	1	ADFDTYDDR	9	0	Q15056-2;Q15056	Q15056-2	EIF4H	Eukaryotic translation initiation factor 4H	0		151.04	1.2112000000000001e-09	10765000.0	131.91	0.0	141.09	221.22	119.01	0.0	0.0	0.0	0.0	0.0	False	True	126.11139434457424	0.0	111.4771371089311	201.82598606620746	134.6619009988435	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)ADFDTYDDRAYSSFGGGR	ddPTM_K562_Methotrexat_30min_R1	2	ADFDTYDDRAYSSFGGGR	18	1	Q15056-2;Q15056	Q15056-2	EIF4H	Eukaryotic translation initiation factor 4H	0	;	55.776	0.0011353	32433200.0	232.89	302.71	412.0	416.06	279.09000000000003	252.04	389.33000000000004	339.93	275.07	416.5	False	True	222.65243445461223	352.7276823097676	325.5268303131307	379.58466577482244	315.7952268697357	300.7431629341024	476.64716315054403	327.97446922584203	262.28205573911856	341.0678140324822	0.6528098674048661	1.0341863635252753	0.9544343292449418	1.112930186190691	0.9259015769798213	0.8817694035047838	1.39751434623834	0.9616107288112703	0.7690026585567515	1.0	8.413914806565304	-6.259053379191669	23.792557087693368	1.0108190509963904	0.6528096124807387	0.30812169948229406	0.1576590243770107	138.6525747038145	1382426.4658627233	0.03946800163145093	0.25528787201654135	5.507400007196033e-07	6.259053379191669	-0.3580094385156517	
(ac)ADGDS(ph)GS(ph)ERGGGGGPCGFQPASR	ddPTM_K562_Methotrexat_30min_R1	2	ADGDSGSERGGGGGPCGFQPASR	23	1	Q96QR8	Q96QR8	PURB	Transcriptional activator protein Pur-beta	2	ADGDS(1)GS(1)ERGGGGGPCGFQPASR;ADGDS(1)GS(1)ERGGGGGPCGFQPASR	123.72	8.6292e-06	72267000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)ADGDS(ph)GSERGGGGGPCGFQPASR	ddPTM_K562_Methotrexat_30min_R1	1	ADGDSGSERGGGGGPCGFQPASR	23	1	Q96QR8	Q96QR8	PURB	Transcriptional activator protein Pur-beta	1	ADGDS(0.5)GS(0.5)ERGGGGGPCGFQPASR	79.885	9.625e-10	60076000.0	0.0	0.0	62.888999999999996	118.1	0.0	50.586999999999996	0.0	0.0	0.0	114.35	True	False	0.0	0.0	49.68945832903513	107.74635636207887	0.0	60.362221803473446	0.0	0.0	0.0	93.64010692584469	0.0	0.0	0.5306429046304392	1.1506432435772973	0.0	0.6446193173537851	0.0	0.0	0.0	1.0	6.549054676724065	-12.379576893904606	3.085871841051694	1.008813502732872	0.273635936074215	0.25737128036985246	0.3771051367063698	111432036.87206258	142259474.02487254	8798505.09268813	0.10261969223205564	4.172757112741886e-13	12.379576893904606	-0.735177566658657	
(ac)ADGDSGS(ph)ERGGGGGPCGFQPASR	ddPTM_K562_Methotrexat_30min_R1	1	ADGDSGSERGGGGGPCGFQPASR	23	1	Q96QR8	Q96QR8	PURB	Transcriptional activator protein Pur-beta	1	ADGDS(0.252)GS(0.748)ERGGGGGPCGFQPASR	77.24	1.7580999999999998e-07	53274000.0	68.72800000000001	150.98	50.50899999999999	0.0	0.0	129.05	0.0	63.272	0.0	0.0	True	False	65.70679941258359	175.92687877879402	39.90785114632503	0.0	0.0	153.98708608413722	0.0	61.046687897089015	0.0	0.0											0.0														
(ac)ADHS(ph)FS(ph)DGVPSDSVEAAK	ddPTM_K562_Methotrexat_30min_R1	2	ADHSFSDGVPSDSVEAAK	18	0	E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;E9PKI2;E9PP22;C9J1B1	E9PNJ7	NAP1L4	Nucleosome assembly protein 1-like 4	2	ADHS(0.998)FS(0.996)DGVPS(0.001)DS(0.005)VEAAK;ADHS(0.998)FS(0.988)DGVPS(0.008)DS(0.006)VEAAK	73.46600000000001	1.6907e-11	18405900.0	3657.0	3121.19	4204.0	4279.9	3216.27	2758.22	2903.55	3342.1	3725.0	4264.0	True	False	3496.2426587681616	3636.9135963411322	3321.637851059224	3904.6878119734265	3639.265879552563	3291.206978527615	3554.7449992699308	3224.556448679687	3551.825563050192	3491.7482809952076	1.0012871425461611	1.0415738202367069	0.951282161185027	1.1182615405657261	1.0422474894196299	0.9425670792023888	1.0180415978487338	0.9234790681304879	1.017205502006537	1.0	11.769733843958932	-8.243935175257537	24.768014909807658	0.9778375239384749	1.0319485573612768	0.21763158095789348	0.04790831103401057	1095.9576950203061	1550753.530236092	0.01548143721286397	0.015447876004101486	5.702493839095007e-09	8.243935175257537	0.05411103342280188	
(ac)ADHS(ph)FSDGVPS(ph)DSVEAAK	ddPTM_K562_Methotrexat_30min_R1	1	ADHSFSDGVPSDSVEAAK	18	0	E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;E9PKI2;E9PP22;C9J1B1	E9PNJ7	NAP1L4	Nucleosome assembly protein 1-like 4	2	ADHS(0.776)FS(0.388)DGVPS(0.726)DS(0.11)VEAAK	71.637	1.1818e-11	7989200.0	1039.0	693.48	907.39	952.07	743.41	652.56	650.71	889.8	932.78	1106.0	True	False	993.3268040634724	808.0657828554648	716.9412392180375	868.6035012840349	841.181445437781	778.6579844638862	796.6482817499053	858.5052296565592	889.4152613964994	905.6926826408771	1.0967592242956696	0.8922074764910924	0.7915943818023725	0.9590488229973381	0.9287713830093116	0.8597375239837701	0.8796011020283248	0.9478990457925246	0.982027655123684	1.0	9.822877791434463	-9.62511617880157	2.9157697177882906	0.9938481222943008	0.9098825322870085	0.13672842930448048	0.07462015471431813	0.5174125767167227	8.274585958912722	0.06389697609198564	0.02004984478756976	2.3707394205859923e-10	9.62511617880157	-0.0839655900072922	
(ac)ADHS(ph)FSDGVPSDSVEAAK	ddPTM_K562_Methotrexat_30min_R1	2	ADHSFSDGVPSDSVEAAK	18	0	E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;E9PKI2;E9PP22;C9J1B1	E9PNJ7	NAP1L4	Nucleosome assembly protein 1-like 4	1	ADHS(0.995)FS(0.005)DGVPSDSVEAAK;ADHS(0.999)FS(0.001)DGVPSDSVEAAK	119.01	5.656299999999998e-226	310880000.0	5293.8	4017.3999999999996	4727.0	5405.7	3662.7	3820.7	3706.1	4503.3	5017.3	6651.8	True	False	5061.090890617145	4681.207065875788	3734.8672982771086	4931.790673890684	4144.409249545956	4558.996201485181	4537.287266206642	4344.916386505261	4784.046818118589	5447.094562740133	0.9291358599200065	0.8593952265666067	0.6856622838576723	0.9053983948848084	0.7608476779336711	0.8369592539608494	0.8329738384281294	0.7976576019490971	0.8782749708152667	1.0	12.411271197555893	-10.082641877042365	4.138172237215911	0.9999504040502162	0.8238277336880271	0.39240772572551397	0.06561329497781851	0.3745597664792193	15.235537218278377	0.06117257252832406	0.01604470562811672	8.267193884824418e-11	10.082641877042365	-0.1761226703621891	
(ac)ADHSFSDGVPS(ph)DSVEAAK	ddPTM_K562_Methotrexat_30min_R1	1	ADHSFSDGVPSDSVEAAK	18	0	E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;E9PKT8;C9JZI7;E9PNW0;E9PJJ2;E9PKI2;E9PP22;C9J1B1	E9PNJ7	NAP1L4	Nucleosome assembly protein 1-like 4	1	ADHS(0.124)FS(0.124)DGVPS(0.494)DS(0.258)VEAAK	62.203	9.1487e-07	12273000.0	1937.1	1396.4	2404.2	2304.2	1338.0	1259.6	1509.2	1983.7	1959.8	2278.0	True	False	1851.947403418048	1627.1313652583651	1899.5912753369619	2102.194363501288	1513.9704523691507	1502.9998731621795	1847.6765176760111	1913.9321466281372	1868.6893257626227	1865.4321257286765	0.9927712608115608	0.8722543923289484	1.0183116550514761	1.1269208536226571	0.8115923551910325	0.8057113697315985	0.9904817721278765	1.0259993490143822	1.0017460833814438	1.0	10.865294152907866	-8.982730183739971	24.989495138586413	1.009971809720037	0.9378315922387885	0.11579267366460777	0.09130531493677778	572.9550711513589	829066.8301639582	0.04156366178542364	0.0280162995366773	1.0405664428612718e-09	8.982730183739971	-0.07214021748124844	
(ac)ADLEEQLS(ph)DEEKVR	ddPTM_K562_Methotrexat_30min_R1	1	ADLEEQLSDEEKVR	14	1	C9JUG7;F8W9N7;P47755-2;P47755	C9JUG7	CAPZA2	F-actin-capping protein subunit alpha-2	1	ADLEEQLS(1)DEEKVR	88.09200000000001	0.00048495	14811000.0	1045.4	791.31	1417.7	1461.1	1042.9	856.98	783.27	1125.7	1268.2	1541.6	True	False	999.4454677266158	922.0605275297887	1120.1441440168094	1333.0076315040944	1180.0596298772698	1022.5792563532261	958.9382361516618	1086.1084929471663	1209.241658808122	1262.401301590574	0.7917018672805196	0.7304020729129717	0.8873122537227058	1.055930178323295	0.9347737747025792	0.8100270928624821	0.7596144228807741	0.8603512144503607	0.9578900602245317	1.0	10.301954882608113	-15.240727896490588	0.017788998674771034	2.0316381638124343	1.0547144693189394e-06	0.19504684076893908	0.0916755329849017	8036.026006798938	12.225571526796951	883.2915547021182	548.9754349977076	5.744762826973093e-16	15.240727896490588	-2.031637109097965	
(ac)ADPAAGPPPS(ph)EGEESTVR	ddPTM_K562_Methotrexat_30min_R1	1	ADPAAGPPPSEGEESTVR	18	0	P05771-2;P05771	P05771-2	PRKCB	Protein kinase C beta type	1	ADPAAGPPPS(0.983)EGEES(0.011)T(0.006)VR	75.91	0.0023159	4826700.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	142.44	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	116.64273572817949	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	6.865952651788094														
(ac)AEAPAS(ph)PAPLSPLEVELDPEFEPQSRPR	ddPTM_K562_Methotrexat_30min_R1	1	AEAPASPAPLSPLEVELDPEFEPQSRPR	28	1	O43524	O43524	FOXO3	Forkhead box protein O3	1	AEAPAS(0.848)PAPLS(0.152)PLEVELDPEFEPQSRPR	79.17699999999999	3.7921e-05	10102000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)AEPPS(ph)PVHCVAAAAPTATVSEKEPFGK	ddPTM_K562_Methotrexat_30min_R1	4	AEPPSPVHCVAAAAPTATVSEKEPFGK	27	1	Q6PCB5	Q6PCB5	RSBN1L	Round spermatid basic protein 1-like protein	1	AEPPS(1)PVHCVAAAAPTATVSEKEPFGK;AEPPS(1)PVHCVAAAAPTATVSEKEPFGK;AEPPS(1)PVHCVAAAAPTATVSEKEPFGK;AEPPS(1)PVHCVAAAAPTATVSEKEPFGK	95.209	4.0068e-12	73609000.0	10427.100000000002	7156.4	14132.300000000001	11464.900000000001	7600.700000000001	7142.1	6141.0	9181.4	8846.900000000001	13224.099999999999	True	False	9968.737169057014	8338.873461998686	11166.12335930644	10459.790017405576	8600.325274530795	8522.209744451888	7518.275573183396	8858.484957932944	8435.609549999666	10829.087345851007	0.9205519219379441	0.7700439746839417	1.031123214975689	0.9658976498525592	0.7941874508774622	0.7869739593260403	0.6942667773442518	0.8180269190761428	0.7789769609007389	1.0	13.402624040122937	-7.775158096897421	24.519261963391223	0.7958281550676447	0.9188583846353944	0.23329153828084193	0.09477519841022287	243.05631316969482	434408.9602030862	0.029022784372739877	0.03308916774959792	1.678192991701366e-08	7.775158096897421	0.12303022956774967	
(ac)AES(ph)SESFTMASS(ph)PAQR	ddPTM_K562_Methotrexat_30min_R1	1	AESSESFTMASSPAQR	16	0	P49736;F8WDM3	P49736	MCM2	DNA replication licensing factor MCM2	2	AES(0.515)S(0.29)ES(0.134)FT(0.062)MAS(0.107)S(0.893)PAQR	60.949	0.0057616	0.0	649.25	735.34	584.72	636.44	781.06	756.49	411.24	686.98	619.83	590.25	True	False	620.7097473899997	856.8424363571226	461.9952626715868	580.6442933368459	883.783080364311	902.67098606578	503.4710383839664	662.8185240160295	591.0142385893694	483.35000536055844	1.2841827671585042	1.7727163067226093	0.9558192977094477	1.2012915835259173	1.8284536475903141	1.867530725260727	1.0416282875768224	1.371301368915048	1.2227459026270167	1.0	8.916924447428398	-9.845671659046468	1.0568285403428634	1.0158344446094763	1.44730407636251	0.17044787191876065	0.3008806129307727	0.9465845707460583	2.3097531790041783	0.29947952217643936	0.10033641151691415	1.4266858074979258e-10	9.845671659046468	0.43146963175303377	
(ac)AES(ph)SESFTMASSPAQR	ddPTM_K562_Methotrexat_30min_R1	2	AESSESFTMASSPAQR	16	0	P49736;F8WDM3	P49736	MCM2	DNA replication licensing factor MCM2	1	AES(0.775)S(0.203)ES(0.022)FTMASSPAQR;AES(0.498)S(0.498)ES(0.003)FTMASSPAQR	112.94	1.9952999999999996e-11	20540500.0	525.1600000000001	309.59000000000003	447.93	417.51	328.07	445.04999999999995	455.46000000000004	388.76	483.28	487.39	True	False	502.07459520882924	360.74448536976297	353.9156143256325	380.9075465260927	371.21695538770354	531.0496138066272	557.6084990330742	375.08709044873416	460.8124182848046	399.1189480943371	1.2579573022179773	0.903852064884918	0.8867422005782091	0.9543709922688514	0.9300910346655891	1.3305547540206148	1.3970985384068408	0.9397877305491327	1.1545741450889109	1.0	8.640674961915893	-8.239764935003612	24.927728663002444	1.1751832494267809	0.9746669911617644	0.23341638036101076	0.15978408775557043	1105.6558672049966	1271613.7186217622	0.05421541219726688	0.05416988885929119	5.757514826268691e-09	8.239764935003612	-0.2005162582650165	
(ac)AESSESFTMAS(ph)SPAQR	ddPTM_K562_Methotrexat_30min_R1	1	AESSESFTMASSPAQR	16	0	P49736;F8WDM3	P49736	MCM2	DNA replication licensing factor MCM2	1	AES(0.002)SESFT(0.001)MAS(0.965)S(0.032)PAQR	87.363	0.00087379	169730000.0	0.0	0.0	0.0	52.425	52.823	56.104	61.275	0.0	0.0	0.0	True	False	0.0	0.0	0.0	47.828981645063394	59.77015037779943	66.94530397260313	75.01747854532042	0.0	0.0	0.0											0.0														
(ac)AESSESFTMASS(ph)PAQR	ddPTM_K562_Methotrexat_30min_R1	1	AESSESFTMASSPAQR	16	0	P49736;F8WDM3	P49736	MCM2	DNA replication licensing factor MCM2	1	AESSESFTMAS(0.067)S(0.933)PAQR	174.18	1.539e-65	127060000.0	0.0	68.469	59.852	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	79.78233847599184	47.28988312597451	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)AETLSGLGDSGAAGAAALS(ph)SASSETGTRR	ddPTM_K562_Methotrexat_30min_R1	1	AETLSGLGDSGAAGAAALSSASSETGTRR	29	1	Q15424-2;Q15424;Q15424-4;Q15424-3;K7ES42	Q15424-2	SAFB	Scaffold attachment factor B1	1	AETLSGLGDSGAAGAAALS(0.29)S(0.037)AS(0.103)S(0.251)ET(0.137)GT(0.183)RR	73.175	3.545e-22	59318000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)AETLSGLGDSGAAGAAALSSASS(ph)ETGTRR	ddPTM_K562_Methotrexat_30min_R1	2	AETLSGLGDSGAAGAAALSSASSETGTRR	29	1	Q15424-2;Q15424;Q15424-4;Q15424-3;K7ES42	Q15424-2	SAFB	Scaffold attachment factor B1	1	AETLSGLGDSGAAGAAALS(0.067)S(0.011)AS(0.027)S(0.373)ET(0.223)GT(0.298)RR;AETLSGLGDSGAAGAAALS(0.063)S(0.011)AS(0.023)S(0.301)ET(0.301)GT(0.301)RR	64.405	2.9191999999999998e-15	88662000.0	0.0	0.0	228.11	0.0	0.0	160.17	186.44	0.0	0.0	247.93599999999998	True	False	0.0	0.0	180.2328283075928	0.0	0.0	191.1205856497191	228.2539159525016	0.0	0.0	203.03238785103835	0.0	0.0	0.8877048150555505	0.0	0.0	0.9413305319047975	1.1242241613193649	0.0	0.0	1.0	7.665566075140922	-8.245768482182193	24.759176084638753	0.5825555443928769	0.19726774389019125	0.1969069992740622	0.4367479758123817	1510.8561470884817	2387073.337986127	0.1540955981578562	0.1535757247980888	5.678472381228673e-09	8.245768482182193	-0.3852878005026857	
(ac)AEVQVLVLDGR	ddPTM_K562_Methotrexat_30min_R1	1	AEVQVLVLDGR	11	0	M0QZU1;A0A096LPE0;P40429	M0QZU1	RPL13A	60S ribosomal protein L13a	0		95.573	4.0004e-12	0.0	64.60300000000001	0.0	119.98	161.68	0.0	97.85700000000001	142.45	63.345	0.0	63.775	False	True	61.763129473448046	0.0	94.79783762371218	147.50576542439384	0.0	116.766480301708	174.39803865819485	61.11712044571219	0.0	52.22472950761476	1.1826414431585044	0.0	1.815190591076014	2.8244428801280126	0.0	2.2358465309941447	3.3393765808354505	1.1702716514175693	0.0	1.0	5.7066612099148655														
(ac)AGLS(ph)DLELRR	ddPTM_K562_Methotrexat_30min_R1	1	AGLSDLELRR	10	1	Q8NC56;D6RBV0	Q8NC56	LEMD2	LEM domain-containing protein 2	1	AGLS(1)DLELRR	68.893	0.0066798000000000005	17565000.0	368.77	511.65	730.36	764.21	438.43	519.95	467.64	472.34	446.42	410.96	True	False	352.55931235273005	596.1914659370109	577.067416959947	697.2128958125684	496.09122976996053	620.422978763635	572.5201740829644	455.72753447513946	425.6660316394277	336.5311617161796	1.047627537832791	1.7715787830662204	1.7147518049060446	2.0717632573965825	1.474131629416087	1.8435825544348292	1.7012397044105263	1.3541911903524897	1.2648636443314625	1.0	8.39459628977199	-9.673163298897816	1.554435774727368	1.0330956696294777	1.6839735497134811	0.4195341430269144	0.25625243271528986	0.35293856472383545	1.6036709648024534	0.23493594182497674	0.07295845651850646	2.122446251759537e-10	9.673163298897816	0.6508778800840034	
(ac)AHS(ph)PVAVQVPGMQNNIADPEELFTK	ddPTM_K562_Methotrexat_30min_R1	1	AHSPVAVQVPGMQNNIADPEELFTK	25	0	Q8NBY1;B4E0Y9;Q9P289-3;Q9P289	Q8NBY1	STK26	Serine/threonine-protein kinase 26	1	AHS(1)PVAVQVPGMQNNIADPEELFTK	46.132	7.3201e-05	10722000.0	1454.7	1115.6	1789.3	1386.1	1342.4	932.58	905.27	1659.2	1403.3	1863.7	True	False	1390.7531298085983	1299.9339380422748	1413.7503822312726	1264.5827650590813	1518.9491294920383	1112.78788640329	1108.2998417416923	1600.8449955564881	1338.0608892961975	1526.16587037776	0.911272592843631	0.8517645187023559	0.9263412383093969	0.8286011301943668	0.9952713259903162	0.7291395437429421	0.7261988118417059	1.0489325089940869	0.8767466992070775	1.0	10.57569605375907	-9.278160746809684	24.995928616823576	0.9721296910677996	0.855264809154564	0.29054119900782194	0.0876656903191209	1190.469470925098	1779562.4790320834	0.0483474436041466	0.02332444206880386	5.270347522534248e-10	9.278160746809684	-0.11686488191323552	
(ac)AHS(ph)PVQSGLPGMQNLK	ddPTM_K562_Methotrexat_30min_R1	3	AHSPVQSGLPGMQNLK	16	0	B4DR80;Q9Y6E0-2	B4DR80	STK24		1	AHS(0.999)PVQS(0.001)GLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(1)PVQSGLPGMQNLK	188.12	7.499299999999997e-150	89142000.0	6547.549999999999	5633.13	7605.35	6641.5599999999995	6158.08	5630.25	4877.88	6943.64	6874.0199999999995	7570.030000000001	True	False	6259.727541815003	6563.908985661596	6009.090968257207	6059.304746487122	6967.975458389697	6718.216128827688	5971.868759635211	6699.428245507386	6554.448310582095	6199.024211909505	1.0097924008409058	1.0588616468138772	0.969360783704087	0.9774610550554143	1.1240439172673162	1.0837538133696458	0.9633562566447338	1.0807230326083435	1.0573354912842174	1.0	12.597825423479119	-7.707530975838149	24.999891469359522	1.0527750268163953	1.0053321825783292	0.1940229357879958	0.04751615665106685	168.64513810670584	78207.79653877464	0.014439762385033757	0.018641634421736743	1.9609613058971735e-08	7.707530975838149	-0.047442844238066106	
(ac)AKS(ph)PENSTLEEILGQYQR	ddPTM_K562_Methotrexat_30min_R1	1	AKSPENSTLEEILGQYQR	18	1	Q86SQ7-2;Q86SQ7-3;Q86SQ7-4;Q86SQ7	Q86SQ7-2	SDCCAG8	Serologically defined colon cancer antigen 8	1	AKS(1)PENSTLEEILGQYQR	98.0	8.992200000000001e-15	10790000.0	353.96	370.23	638.05	473.9	252.33	439.83	308.94	531.63	503.63	554.34	True	False	338.40034221973707	431.40421466600174	504.1320244691578	432.35392277721587	285.51581782235263	524.8209226841226	378.2276592703596	512.9322715692475	480.2163512265688	453.94365433557306	0.7454677226737444	0.9503474947731965	1.110560792411658	0.9524396225122751	0.6289675273471013	1.1561367091964112	0.8332039795202397	1.129947002607658	1.0578765594365462	1.0	8.826369424173153	-9.267929423898936	24.954415034756472	1.0704338362211394	0.9203778340113941	0.17390295992708227	0.15015031772706636	959.6916613209131	3690014.0478688944	0.07928541209029151	0.03948603339254585	5.395983041501394e-10	9.267929423898936	-0.15005600220974535	
(ac)ALSVPGYS(ph)PGFR	ddPTM_K562_Methotrexat_30min_R1	1	ALSVPGYSPGFR	12	0	F8WC22;F8WD19;C9J4K5;C9JSP0;F8W8A5;Q9NYP3-2;Q9NYP3-3;Q9NYP3	F8WC22	DONSON	Protein downstream neighbor of Son	1	ALS(0.01)VPGYS(0.99)PGFR	66.98899999999999	0.004823600000000001	0.0	289.0	211.27	413.39	128.88	153.59	61.983000000000004	162.87	233.0	224.41	341.37	True	False	276.29590603882906	246.17877652401512	326.6250883086047	117.58129049910865	173.78977711463222	73.96033751842756	199.39774346269013	224.80525793434273	213.977228081636	279.54458505706697	0.9883786730564832	0.880642264895811	1.1684185842552686	0.420617306806731	0.6216889412440392	0.26457438802947697	0.7132949594497942	0.8041839118022994	0.7654493755904953	1.0	8.12693458916158	-7.257399682197257	24.99117123210622	0.6322153687740377	0.9992960813993834	0.38958339037667244	0.20297999221673863	355.7395583726468	2200738.1583843743	0.056668391092267324	0.09376237252199376	5.528410941142887e-08	7.257399682197257	0.3670807126253457	
(ac)AMS(ph)SGGS(ph)GGGVPEQEDSVLFR	ddPTM_K562_Methotrexat_30min_R1	1	AMSSGGSGGGVPEQEDSVLFR	21	0	B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637	B4DP61	SMN2;SMN1	Survival motor neuron protein	2	AMS(0.549)S(0.549)GGS(0.9)GGGVPEQEDS(0.001)VLFR	57.413999999999994	0.006106100000000001	4724600.0	340.59	241.94	294.91	529.22	264.73	273.31	343.49	485.21	355.09	533.97	True	False	325.6180714109511	281.9164727231515	233.01242118360523	482.82410426705667	299.5466351686737	326.12328940453716	420.526376263274	468.14488928035416	338.5819434049646	437.2628587249085	0.7446735182596527	0.6447299767129576	0.5328886653284184	1.1041964681725043	0.6850493454719074	0.7458289285203351	0.9617244361653782	1.0706257802126162	0.7743212958729107	1.0	8.772357000327334	-7.776175568362422	0.4611878228278052	0.9754012663843439	0.6152572056221467	0.2887332224463188	0.15557372585587406	1.9194840394976813	0.767812770805374	0.1406140662421695	0.3242113389818883	1.6742658986338252e-08	7.776175568362422	-0.3601440607621972	
(ac)AMS(ph)SGGSGGGVPEQEDSVLFRR	ddPTM_K562_Methotrexat_30min_R1	1	AMSSGGSGGGVPEQEDSVLFRR	22	1	B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637	B4DP61	SMN2;SMN1	Survival motor neuron protein	1	AMS(0.351)S(0.351)GGS(0.297)GGGVPEQEDSVLFRR	43.761	0.013297999999999999	25591000.0	0.0	0.0	0.0	0.0	0.0	52.918	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	63.1436545633504	0.0	0.0	0.0	0.0											0.0														
(ac)AQES(ph)PKNSAAEIPVTSNGEVDDSREHSFNR	ddPTM_K562_Methotrexat_30min_R1	1	AQESPKNSAAEIPVTSNGEVDDSREHSFNR	30	2	P53367-3;P53367-2;P53367	P53367-3	ARFIP1	Arfaptin-1	1	AQES(0.898)PKNS(0.092)AAEIPVT(0.006)S(0.003)NGEVDDSREHSFNR	40.28	0.0085601	0.0	0.0	196.88	156.47	129.09	0.0	122.7	171.35	0.0	163.54	248.5	True	False	0.0	229.41107361219343	123.6290852890669	117.77288012515471	0.0	146.4100384542707	209.77959932665286	0.0	155.93706109563186	203.49424198576656	0.0	1.1273590415803492	0.6075311226629899	0.5787528874325218	0.0	0.7194800060461238	1.0308871508085518	0.0	0.76629716680897	1.0	7.668844162762041	-9.999952148364702	24.99997892611329	1.0000001787861723	0.5319480642413238	0.14219780828669437	0.38670820945296575	2.561183115237375	1336799.8063778603	0.3626749121202714	0.0936422597381307	1.0001101885324224e-10	9.999952148364702	-0.4680521145448485	
(ac)AQS(ph)SPQLDIQVLHDLR	ddPTM_K562_Methotrexat_30min_R1	1	AQSSPQLDIQVLHDLR	16	0	F6SS63;Q8N5C8-2;Q8N5C8;A0A0A0MQY2	F6SS63	TAB3	TGF-beta-activated kinase 1 and MAP3K7-binding protein 3	1	AQS(0.5)S(0.5)PQLDIQVLHDLR	106.49	0.00067735	4581100.0	0.0	0.0	51.532	0.0	137.98	67.38	0.0	0.0	0.0	0.0	True	False	0.0	0.0	40.716137426447204	0.0	156.1267885036588	80.40023138589044	0.0	0.0	0.0	0.0											0.0														
(ac)AQSS(ph)PQLDIQVLHDLR	ddPTM_K562_Methotrexat_30min_R1	2	AQSSPQLDIQVLHDLR	16	0	F6SS63;Q8N5C8-2;Q8N5C8;A0A0A0MQY2	F6SS63	TAB3	TGF-beta-activated kinase 1 and MAP3K7-binding protein 3	1	AQS(0.07)S(0.93)PQLDIQVLHDLR;AQS(0.295)S(0.705)PQLDIQVLHDLR	163.23	8.284199999999999e-22	12162600.0	0.0	0.0	160.03	0.0	51.556999999999995	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	126.44188993934539	0.0	58.33764918744118	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)AS(ph)EAPSPPRS(ph)PPPPTSPEPELAQLRR	ddPTM_K562_Methotrexat_30min_R1	1	ASEAPSPPRSPPPPTSPEPELAQLRR	26	2	Q8N302-2;Q8N302-3;Q8N302	Q8N302-2	AGGF1	Angiogenic factor with G patch and FHA domains 1	2	AS(0.54)EAPS(0.476)PPRS(0.979)PPPPT(0.004)S(0.001)PEPELAQLRR	64.295	0.00037383	5609000.0	204.25	193.9	265.3	208.7	209.9	190.25	303.94	256.27	217.26	193.35	True	False	195.27141456204447	225.9386792635326	209.61715553901362	190.40359502765338	237.50552911232043	227.01311993418912	372.10628199207946	247.25683884478113	207.15963002101614	158.3324414001931	1.2333000921048536	1.4269891707945146	1.3239052823621653	1.2025557955390762	1.5000433708466192	1.4337751500995441	2.350158177953957	1.5616309371484218	1.308383981128731	1.0	7.3068130753952	-8.53828530921212	24.9709452730767	1.6432915616922368	1.3473823213703555	0.06294081023926656	0.33113430615743267	470.07594630111413	761891.7253688787	0.1254246118063035	0.09718474272420127	2.895440806569012e-09	8.53828530921212	-0.29590924032188126	
(ac)AS(ph)EDNRVPSPPPTGDDGGGGGR	ddPTM_K562_Methotrexat_30min_R1	1	ASEDNRVPSPPPTGDDGGGGGR	22	1	E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494C0R9	E9PEM5	LRBA	Lipopolysaccharide-responsive and beige-like anchor protein	1	AS(0.833)EDNRVPS(0.156)PPPT(0.011)GDDGGGGGR	63.727	7.829899999999999e-05	16645000.0	57.516999999999996	0.0	0.0	65.98899999999999	0.0	0.0	0.0	0.0	0.0	158.76	True	False	54.98862154891121	0.0	0.0	60.203846824531965	0.0	0.0	0.0	0.0	0.0	130.0070255841461	0.42296653816851015	0.0	0.0	0.4630814877428717	0.0	0.0	0.0	0.0	0.0	1.0	7.0224457784248635	-12.086109809829978	4.106089897541002	1.0001379567186208	0.09180075220717052	0.7046032149765116	0.17507478690018222	586695322.7576104	1157371505.9535377	1281690.68063021	0.04528072015985073	8.201441475523418e-13	12.086109809829978	-0.9083372045114503	
(ac)AS(ph)GVAVSDGVIK	ddPTM_K562_Methotrexat_30min_R1	4	ASGVAVSDGVIK	12	0	E9PP50;P23528;E9PS23	E9PP50	CFL1	Cofilin-1	1	AS(1)GVAVSDGVIK;AS(0.999)GVAVS(0.001)DGVIK;AS(1)GVAVSDGVIK;AS(0.999)GVAVS(0.001)DGVIK	105.4	2.5649e-06	446563000.0	25220.899999999998	17499.3	17230.5	21938.3	16023.1	16251.7	15814.1	19427.5	22485.3	27216.1	True	False	24112.219434652972	20390.7618877583	13614.053518714558	20015.003300408094	18130.418501760934	19392.11101831518	19360.814483289283	18744.22381338817	21439.963310832904	22287.000560598895	1.0818961200764214	0.9149172780031716	0.6108517600516775	0.8980572888660731	0.8134974669410487	0.8701086072837643	0.868704356633669	0.8410384233814762	0.9619941118831636	1.0	14.443914847761107	-9.867453597910131	4.079308696998567	0.9979862278521741	0.8557336016655827	0.16003605477334837	0.1090838529442854	0.37832466632268985	10.592402786538246	0.10600897007483945	0.028111915693793538	1.3568954997296889e-10	9.867453597910131	-0.1422526261865914	
(ac)AS(ph)GVQVADEVCR	ddPTM_K562_Methotrexat_30min_R1	2	ASGVQVADEVCR	12	0	F6RFD5;P60981	F6RFD5	DSTN	Destrin	1	AS(1)GVQVADEVCR;AS(1)GVQVADEVCR	114.5	2.8611e-08	65281000.0	493.64	429.86	514.07	235.445	327.09000000000003	61.573	113.277	280.71000000000004	409.29999999999995	528.0799999999999	True	False	471.94017666784623	500.8870586293047	406.17373218221155	214.8039024019447	370.108068210333	73.4711108210661	138.6822507903429	270.8372701920575	390.2717323373004	432.4395948001756	1.0913435826474756	1.1582821384816941	0.93926119871123	0.49672579704733705	0.8558607321361377	0.169899129738608	0.32069739324963076	0.6263008139141553	0.9024884331362849	1.0	8.756354814157731	-7.084577969830161	3.370772942617892	0.5870328180528624	1.118972603083515	0.406431921981085	0.24556000630104582	0.22781885535840396	4.9279416941364405	0.07021681933713445	0.13820774206430966	8.230420611304282e-08	7.084577969830161	0.5319397850306525	
(ac)AS(ph)PGIEVELLGK	ddPTM_K562_Methotrexat_30min_R1	2	ASPGIEVELLGK	12	0	Q8TCY9	Q8TCY9	URGCP	Up-regulator of cell proliferation	1	AS(1)PGIEVELLGK;AS(1)PGIEVELLGK	75.294	1.1339e-06	2336100.0	4029.1000000000004	3238.5	4842.700000000001	4096.9	3751.7	3244.1	2585.6	3452.7	3889.4	4936.6	True	False	3851.9855883081204	3773.607079912068	3826.2834494111594	3737.7311378475943	4245.114309531644	3870.9764119763618	3165.4866181441107	3331.26658399101	3708.582642933535	4042.5339033679475	0.9528641392713921	0.9334756788973795	0.9465062114193714	0.9246010614118997	1.0501122343080218	0.9575618917509495	0.7830451627151118	0.8240540867735554	0.9173906098459216	1.0	11.981044157808322	-8.639508894539299	11.690110647876443	0.8665141492256611	0.9617272761917735	0.2674826334621331	0.0628303089068562	0.46019204020500076	44.86131970123612	0.02376586092164258	0.018402122368631466	2.2934596589183383e-09	8.639508894539299	0.0952131269661124	
(ac)ASAVS(ph)PANLPAVLLQPR	ddPTM_K562_Methotrexat_30min_R1	1	ASAVSPANLPAVLLQPR	17	0	P51610-2;P51610;A6NEM2;P51610-4;P51610-3	P51610-2	HCFC1	Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6	1	AS(0.442)AVS(0.558)PANLPAVLLQPR	61.657	0.030864999999999997	68218000.0	1589.7	2035.5	2526.0	2068.2	1535.9	1792.0	1342.2	1315.9	1271.1	1410.6	True	False	1519.818691453033	2371.8317774157854	1995.8271198324476	1886.8841170876515	1737.8977711463226	2138.278638223741	1643.2225165814612	1269.6190511407792	1212.0068384411013	1155.1266710065283	1.315716041885456	2.0533088162089372	1.7277993573582442	1.6334867546980807	1.504508392687351	1.8511204804582477	1.4225474641232436	1.0991167315308261	1.0492414978047473	1.0	10.17383535068657	-9.119250803287239	2.6423964038581986	1.04040092835744	1.68991074321552	0.695687492302437	0.18635834911078916	0.15778764434370895	2.1210054931721936	0.10321094698664997	0.052551343805856764	7.59887318385211e-10	9.119250803287239	0.64950981485808	
(ac)ASEDNRVPS(ph)PPPTGDDGGGGGREETPTEGGALSLKPGLPIR	ddPTM_K562_Methotrexat_30min_R1	1	ASEDNRVPSPPPTGDDGGGGGREETPTEGGALSLKPGLPIR	41	3	E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494C0R9	E9PEM5	LRBA	Lipopolysaccharide-responsive and beige-like anchor protein	1	AS(0.467)EDNRVPS(0.509)PPPT(0.02)GDDGGGGGREET(0.003)PT(0.001)EGGALSLKPGLPIR	45.276	7.2734e-07	217110000.0	858.57	684.51	1061.8	1001.6	675.19	647.52	786.9	722.81	811.8	762.67	True	False	820.8282908226907	797.613642819395	838.9426903555387	913.7912830843206	763.9893196824569	772.6440757938824	963.382356055693	697.3883626073916	774.0595951903749	624.5430725765978	1.3142861187080406	1.2771155070678826	1.3432903624956078	1.4631357278760748	1.2232772297522467	1.2371349707015133	1.5425394954445482	1.116637736017574	1.2394014587287565	1.0	9.286657262728527	-9.981480636305303	1.2257586857889213	1.0086348105596639	1.3325888490059743	0.4538422918974636	0.10943036501257286	0.4261275085342929	1.443452750864044	0.10149067301513154	0.0317606994124886	1.0435646606442379e-10	9.981480636305303	0.32395403844631043	
(ac)ASLEVSRS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	ASLEVSRSPR	10	1	Q5QPJ9;Q5QPK2;O60762	Q5QPJ9	DPM1	Dolichol-phosphate mannosyltransferase subunit 1	1	ASLEVS(0.02)RS(0.98)PR;ASLEVS(0.011)RS(0.989)PR	103.46	4.0299e-05	769670000.0	173.51	321.54999999999995	552.6999999999999	283.3	346.8	518.36	288.63	339.69	420.11	155.87	True	False	165.88270815500778	374.68067208452266	436.69582309239604	258.46352885162537	392.41027868581574	618.5257337665504	353.3626247659866	327.7429101618751	400.5791777967832	127.64043258881864	1.2996094167855334	2.935438751539807	3.421296952973903	2.024934604258517	3.0743414976501033	4.84584485669264	2.7684223376483708	2.5677044766658486	3.138340803710768	1.0	6.995941592980346	-7.819840567184993	23.828309390654763	3.068299289470479	2.5286113616150034	0.03057943678506725	1.0251598116559522	162.84678411418744	66441.13070599995	0.3173080828231901	0.3597938786133783	1.5141169903109394e-08	7.819840567184993	-0.5396879278554754	
(ac)ATALS(ph)EEELDNEDYYSLLNVR	ddPTM_K562_Methotrexat_30min_R1	1	ATALSEEELDNEDYYSLLNVR	21	0	B1AK20;Q9NVH1-3;Q9NVH1-2;Q9NVH1	B1AK20	DNAJC11	DnaJ homolog subfamily C member 11	1	AT(0.41)ALS(0.59)EEELDNEDYYSLLNVR	192.63	2.6864000000000003e-51	2332900.0	0.0	0.0	0.0	0.0	0.0	0.0	62.419	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	76.41804966659086	0.0	0.0	0.0											0.0														
(ac)ATDELATKLS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	ATDELATKLSR	11	1	Q96C19	Q96C19	EFHD2	EF-hand domain-containing protein D2	1	ATDELATKLS(1)R	87.719	3.0588e-08	10696000.0	1976.6	1481.4	2155.9	2111.0	1460.0	1595.0	1622.2	2287.2	2218.5	2666.3	True	False	1889.711030714014	1726.1761705054018	1703.4060521166946	1925.9319075389385	1652.0155907765022	1903.2111763207956	1986.0196441651365	2206.7578796026987	2115.362419228686	2183.4072330247454	0.865487208309801	0.7905882807368342	0.7801595718618696	0.8820763613899374	0.7566227526359849	0.8716702718274937	0.909596530654448	1.010694590649315	0.9688354912602379	1.0	11.092365520933336	-8.877636093339135	1.8659578130584136	0.9934516541485456	0.8155945151730523	0.7969237976170768	0.03865794099668951	0.14333899863575575	1.0086259015500505	0.020765473032312704	0.011813314835673093	1.3254517005227483e-09	8.877636093339135	-0.17785713897549338	
(ac)ATSAT(ph)SPHAPGFPAEGR	ddPTM_K562_Methotrexat_30min_R1	3	ATSATSPHAPGFPAEGR	17	0	Q5VVL2;Q9NUP7-2;Q9NUP7	Q5VVL2	TRMT13	tRNA:m(4)X modification enzyme TRM13 homolog	1	AT(0.186)S(0.268)AT(0.53)S(0.016)PHAPGFPAEGR;ATS(0.001)AT(0.971)S(0.028)PHAPGFPAEGR;AT(0.01)S(0.004)AT(0.975)S(0.012)PHAPGFPAEGR	143.97	4.2023e-09	107774000.0	0.0	0.0	137.0	144.62	120.76	54.368	251.01999999999998	62.00899999999999	189.01500000000001	0.0	True	False	0.0	0.0	108.24557221577399	131.94138913703517	136.64205667271952	64.8738465418239	307.31762487876495	59.8281083229642	180.22773390602217	0.0											0.0														
(ac)ATTATMATSGS(ph)AR	ddPTM_K562_Methotrexat_30min_R1	2	ATTATMATSGSAR	13	0	I3L3H2;P38919	I3L3H2	EIF4A3	Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed	1	ATTATMAT(0.001)S(0.013)GS(0.986)AR;ATTATMATS(0.004)GS(0.996)AR	149.35	1.0436000000000002e-08	208068000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)ATVVVEATEPEPSGSIANPAAS(ph)TSPSLSHR	ddPTM_K562_Methotrexat_30min_R1	1	ATVVVEATEPEPSGSIANPAASTSPSLSHR	30	0	P46821;D6RCL2;D6RGJ3;D6RA32	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	ATVVVEATEPEPSGSIANPAAS(0.281)T(0.234)S(0.234)PS(0.234)LS(0.016)HR	67.684	8.883200000000002e-09	18284000.0	274.38	0.0	331.68	279.59	143.97	285.66	133.06	286.81	238.5	231.93	True	False	262.31858373333546	0.0	262.06490067538624	255.07877879147873	162.90457849595415	340.85975211774206	162.90209212958516	276.7227297345443	227.4121870570393	189.92522955234952	1.3811676539847593	0.0	1.3798319543594533	1.3430484164357468	0.8577300597709816	1.7947049632170649	0.8577169684803992	1.457008794391219	1.1973774500262333	1.0	7.569287754726963	-6.848728369382136	23.47429288267273	1.2490225385993536	0.6891964343717041	0.21901452260487486	0.41130839543131126	15.829902727077652	4251.431633188083	0.09813997476435622	0.2042949920869602	1.4166795688547071e-07	6.848728369382136	-0.5598261042276496	
(ac)ATVVVEATEPEPSGSIANPAAST(ph)SPSLSHR	ddPTM_K562_Methotrexat_30min_R1	1	ATVVVEATEPEPSGSIANPAASTSPSLSHR	30	0	P46821;D6RCL2;D6RGJ3;D6RA32	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	ATVVVEATEPEPSGSIANPAAS(0.077)T(0.657)S(0.186)PS(0.077)LS(0.003)HR	98.445	7.259399999999999e-23	13554000.0	299.53	157.89	193.24	264.54	226.46	186.43	308.88	157.12	197.44	484.5	True	False	286.36301984709496	183.9786388288765	152.68156478084796	241.34818892484634	256.24345937482656	222.45495899779695	378.1542027430204	151.5940005435362	188.2610574949343	396.75235509900955	0.7217676622880614	0.4637115229800328	0.38482837674081677	0.6083094046527283	0.6458523965431308	0.5606897001084803	0.9531240278300352	0.38208721030957943	0.4745052047591595	1.0	8.632094976614836	-7.504794327593491	22.387254603668787	0.6454018055987601	0.5139809740522285	0.09126214063460769	0.1971121846787375	516.0644014011759	638849.9739744718	0.05547817313499292	0.0802419908523247	3.1275601608258175e-08	7.504794327593491	-0.1314208315465316	
(ac)ATVVVEATEPEPSGSIANPAASTS(ph)PSLSHR	ddPTM_K562_Methotrexat_30min_R1	1	ATVVVEATEPEPSGSIANPAASTSPSLSHR	30	0	P46821;D6RCL2;D6RGJ3;D6RA32	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	ATVVVEATEPEPSGSIANPAAS(0.184)T(0.286)S(0.356)PS(0.147)LS(0.026)HR	58.556999999999995	1.866e-05	34810000.0	803.67	703.27	838.7	880.67	487.34	686.62	613.23	835.48	752.05	1134.6	True	False	768.3416290872865	819.4734139539174	662.6683315136474	803.4630284283826	551.433752060973	819.299597420304	750.7624376719191	806.0956948454276	717.087359648832	929.1129455012108	0.8269625698442981	0.8819954752776066	0.7132268845486491	0.8647635708002688	0.5935056170845855	0.8818083973400372	0.8080421667862131	0.8675970975849212	0.7717978348283573	1.0	9.859710174983311	-12.274895706643125	6.59744914476587	1.0000032705929687	0.8011775897560909	0.3251177395170646	0.08598006638326643	3.9781907308313005e-06	4.372038040480882e-07	0.08006933873579367	0.019419347695284406	5.310119484286311e-13	12.274895706643125	-0.1988256808368778	
(ac)DKTFER	ddPTM_K562_Methotrexat_30min_R1	1	DKTFER	6	1	D6RJC7;D6RH20;G5EA06	D6RJC7	MRPS27		0		51.688	0.031707	0.0	173.89	142.63	147.38	126.49	222.69	198.21	139.71	160.94	0.0	214.35	False	True	166.2460038100069	166.1971832045263	116.44695206686696	115.40081808839423	251.97763829453373	236.51127727808472	171.04352390969748	155.2796489783396	0.0	175.5291379060325	0.9471134296745921	0.9468352957643879	0.6634052525752476	0.6574453647130241	1.4355316803836127	1.347418896369777	0.9744451887028789	0.8846374501164972	0.0	1.0	7.455566728129366	-9.545798835220365	24.789000145080436	0.480772274357087	0.9937966410013523	0.2671191669787566	0.3237233038974083	280.6031085551399	303476.91616502975	0.22289147219757627	0.08425642397542722	2.845778964244769e-10	9.545798835220365	0.5130243666442653	
(ac)DSLGAVSTR	ddPTM_K562_Methotrexat_30min_R1	2	DSLGAVSTR	9	0	F8WE70;A0A0A0MQW3;Q9UIV8-2;Q9UIV8	F8WE70	SERPINB13	Serpin B13	0	;	78.77	0.011229000000000001	0.0	230.779	0.0	199.59	132.7	0.0	231.65	172.4	138.47	196.08	139.85	False	True	220.63423148697223	0.0	157.69878655873242	121.06639703004126	0.0	276.413084009224	211.06508855509153	133.59993161445684	186.9642835980891	114.52180982579259	1.92656954882738	0.0	1.3770196855832042	1.0571470815402246	0.0	2.413628324855291	1.8430121640249828	1.1665894192353872	1.6325648702416946	1.0	6.8394785647885845	-8.26524535493354	24.99960563009893	1.636061574222923	0.8620208863509867	0.2450531055329943	0.6476999205816018	472.70045434261846	3104928.386172596	0.21689196771288952	0.1985334386190532	5.429435085629975e-09	8.26524535493354	-0.7740406878719363	
(ac)GLRT(ph)T(ph)K	ddPTM_K562_Methotrexat_30min_R1	3	GLRTTK	6	1	Q8WWZ3	Q8WWZ3	EDARADD	Ectodysplasin-A receptor-associated adapter protein	2	GLRT(1)T(1)K;GLRT(1)T(1)K;GLRT(1)T(1)K	48.242	0.017079	13622200.0	1574.45	1349.68	1141.2199999999998	1712.55	1408.95	1486.48	1592.6200000000001	1409.2199999999998	1331.24	1637.94	True	False	1505.2390631931992	1572.6916793625833	901.693517694055	1562.4134004054035	1594.2516209757223	1773.7212221801492	1949.8055761868316	1359.6569338464992	1269.35094296777	1341.293194036888	1.1222297033081063	1.1725189439225108	0.6722568351966578	1.1648559817880015	1.1885929400547435	1.3223963485878751	1.4536758889519932	1.0136910705960878	0.9463635159046818	1.0	10.389408915900672	-7.478264104458055	24.99949785405442	1.178062679954141	0.9925539981947387	0.13206120457793924	0.1900284254159135	860.443111653206	482143.000381517	0.05628638598236827	0.08348125772963656	3.3245731687097327e-08	7.478264104458055	-0.18550868175940227	
(ac)GRRHCAAGEMS(ph)EKLR	ddPTM_K562_Methotrexat_30min_R1	1	GRRHCAAGEMSEKLR	15	3	C9JW57	C9JW57	C3orf62		1	GRRHCAAGEMS(1)EKLR	53.001000000000005	0.0092084	35501000.0	0.0	61.159	247.18	0.0	103.45	57.391000000000005	0.0	0.0	163.81	0.0	True	False	0.0	71.26448522474674	195.30029591456218	0.0	117.05548826426654	68.48099850797922	0.0	0.0	156.19450885456442	0.0											0.0														
(ac)GTRDDEYDYLFK	ddPTM_K562_Methotrexat_30min_R1	2	GTRDDEYDYLFK	12	1	H3BMH2;H3BSC1;P62491-2;Q15907-2;P62491;Q15907;B4DQU5	H3BMH2	RAB11A;RAB11B	Ras-related protein Rab-11A;Ras-related protein Rab-11B	0	;	75.294	0.0015876	14266000.0	1789.92	1179.94	1692.28	1838.81	1308.69	1192.28	1185.82	1613.49	1388.95	1752.17	False	True	1711.2372599896928	1374.9050294492658	1337.0935543745252	1677.6043822367005	1480.805673625549	1422.6712359271214	1451.770320825979	1556.742642165163	1324.378017664045	1434.8350341255561	1.1926369368535714	0.9582321289549401	0.9318796395220456	1.1691966967192835	1.0320389720118655	0.9915225110140639	1.0118029503724406	1.0849628041832016	0.9230176195629152	1.0	10.486669161542242	-8.002006568605564	24.999565615759334	1.0085691541951138	1.0529489647178651	0.09770073869048701	0.08377640237962233	265.95098511776075	3313500.7450172296	0.026376311709703677	0.029431317414622925	9.953903621841473e-09	8.002006568605564	0.044379810522751306	
(ac)LEELECGAPGARGAAT(ph)AR	ddPTM_K562_Methotrexat_30min_R1	1	LEELECGAPGARGAATAR	18	1	K7EJF1	K7EJF1	CHAF1A		1	LEELECGAPGARGAAT(1)AR	58.688	0.030898000000000002	0.0	2040.4	2090.4	2648.5	1967.4	2027.8	1836.8	1824.2	2727.4	2333.5	2450.7	True	False	1950.7064591059764	2435.803069275342	2092.616043893997	1794.9210965855543	2294.4912431346515	2191.7356041793355	2233.3232862076457	2631.4757960949632	2225.016094329565	2006.8544822314602	0.9720218762134404	1.2137417490115803	1.0427343200126682	0.8943952401520149	1.1433271637031512	1.0921248269791353	1.1128476458962637	1.3112439488731513	1.1087082367105794	1.0	10.9707202947985	-8.403700432042628	1.7626889236222578	1.1568689831750656	1.049402046451481	0.10553440256958102	0.10803544062427477	0.7020784168197354	4.33436868665497	0.048441375239511274	0.039854754850780424	3.947294849768113e-09	8.403700432042628	-0.10746693672358454	
(ac)LGLS(ph)KVPLT(ph)QAT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LGLSKVPLTQATR	13	1	Q15436-2	Q15436-2			3	LGLS(1)KVPLT(1)QAT(1)R	53.168	0.030851	75504000.0	0.0	0.0	0.0	0.0	0.0	128.85	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	153.74843891469257	0.0	0.0	0.0	0.0											0.0														
(ac)LLAALRRGGREPPTGGS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LLAALRRGGREPPTGGSR	18	3	Q5TCH6	Q5TCH6	SPO11		1	LLAALRRGGREPPT(0.074)GGS(0.926)R	60.968	0.029135	7487200.0	2759.5	1964.1	3133.4	2087.4	2194.8	1665.5	1394.0	2457.1	2374.7	2715.9	True	False	2638.1956841320043	2288.6341410082737	2475.7421604445717	1904.4008828975752	2483.4546702988127	1987.3343035500225	1706.639985184441	2370.6824003024635	2264.300715322228	2224.0241923909193	1.1862261629878375	1.0290509198768634	1.1131813084205011	0.8562860464437054	1.1166491258483096	0.8935758479378566	0.7673657467501428	1.0659427214925574	1.0181097503656242	1.0	11.118956766092472	-6.073476690737639	0.7886365499125289	0.9564507043593657	1.3579238969965228	0.28974771132739074	0.10407406228607334	4.4197396925176875	1.73579891012657	0.04027660580798005	1.6678784910683966	8.443515583582594e-07	6.073476690737639	0.4014731926371571	
(ac)MALWCKRGVT(ph)SSRR	ddPTM_K562_Methotrexat_30min_R1	1	MALWCKRGVTSSRR	14	3	K7ERG7	K7ERG7	HEXIM2		1	MALWCKRGVT(0.333)S(0.333)S(0.333)RR	44.511	0.031344	4321300.0	172.67	0.0	144.7	0.0	0.0	64.413	94.04899999999999	127.11	58.53	148.84	True	False	165.07963354922018	0.0	114.32944744250001	0.0	0.0	76.85990062717958	115.1418823289896	122.63946925336614	55.808953075255786	121.8836337109115	1.3544036104204333	0.0	0.9380213237953767	0.0	0.0	0.6306006662837029	0.9446869839972751	1.0062012882242037	0.457887177926002	1.0	6.929360606550803	-8.523664490047809	13.409830695627939	0.843473909838792	0.42229537694085745	0.15226250403694552	0.43355520294704886	0.19682225648517093	2512.9457958387443	0.15830622482578524	0.12606412931128602	2.99457717452155e-09	8.523664490047809	-0.42117853289793455	
(ac)MAPVSGSRS(ph)PDREASGSGGR	ddPTM_K562_Methotrexat_30min_R1	1	MAPVSGSRSPDREASGSGGR	20	2	Q8N5F7	Q8N5F7	NKAP	NF-kappa-B-activating protein	1	MAPVS(0.013)GS(0.059)RS(0.925)PDREAS(0.002)GS(0.001)GGR	59.225	0.0012752	1701800.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)MAS(ph)S(ph)VDEEALHQLYLWVDNIPLSRPK	ddPTM_K562_Methotrexat_30min_R1	1	MASSVDEEALHQLYLWVDNIPLSRPK	26	1	Q9Y4P9-2;Q9Y4P9	Q9Y4P9-2	SPEF1	Sperm flagellar protein 1	2	MAS(0.994)S(0.994)VDEEALHQLY(0.01)LWVDNIPLS(0.002)RPK	42.746	0.027821	0.0	245.15	244.14	423.54	306.06	172.93	156.73	293.03	319.12	282.15	306.0	True	False	234.3734995343217	284.47998532954534	334.6447420165615	279.22819498880517	195.67332610478127	187.01585433527174	358.74943677087276	307.89636872106195	269.0329080844595	250.58043479937447	0.9353224234045697	1.1352841077050262	1.3354783356669189	1.1143256065157974	0.7808803040087539	0.7463306322578804	1.431673773964448	1.228732678062344	1.0736389227668908	1.0	7.9691299638924065	-11.181413399084546	13.973416052731851	0.9999982743324449	1.09169722915409	0.01483297898237268	0.209013942628083	0.0	0.0	0.21831755728692773	0.05294978521299046	6.585467350065106e-12	11.181413399084546	0.09169895482164514	
(ac)MASADKNGGSVS(ph)S(ph)VSSSRLQSRK	ddPTM_K562_Methotrexat_30min_R1	1	MASADKNGGSVSSVSSSRLQSRK	23	3	K7ELA9;K7EJ10;K7EQT5;K7EKA3;K7EIY3;K7EQ53;K7EKI1;K7EPV3;Q6PJF5-2;Q6PJF5	K7ELA9	RHBDF2	Inactive rhomboid protein 2	2	MAS(0.011)ADKNGGS(0.248)VS(0.711)S(0.679)VS(0.183)S(0.048)S(0.04)RLQS(0.079)RK	41.047	0.0019867	6745300.0	5119.9	3903.1	6733.8	5653.5	4139.6	3843.7	3651.2	4620.4	4844.1	6281.3	True	False	4894.835326395159	4548.020933643599	5320.467402821749	5157.866432625005	4684.029958615348	4586.440625971312	4470.0745436911275	4457.897913132347	4618.89884831448	5143.695702958532	0.9516183711217143	0.8841932330926352	1.034366671372403	1.0027549704502001	0.9106351209542207	0.8916625109322273	0.8690394614751503	0.8666721693058689	0.8979728030291138	1.0	12.328589581134691	-7.909172228073274	6.339058475695846	0.8951981621369807	0.96666292920239	0.2571861236202957	0.05043241728245339	0.27036042919385483	15.571228805751339	0.01597912114218088	0.01817332958264165	1.232615918049976e-08	7.909172228073274	0.07146476706540938	
(ac)MASYPEPEDAAGALLAPET(ph)GR	ddPTM_K562_Methotrexat_30min_R1	1	MASYPEPEDAAGALLAPETGR	21	0	P58012	P58012	FOXL2	Forkhead box protein L2	1	MASYPEPEDAAGALLAPET(1)GR	40.937	0.031698000000000004	32370000.0	2991.0	2522.4	2695.5	2477.0	2767.3	2921.0	2430.4	3210.3	2860.9	3155.9	True	False	2859.5192213222767	2939.183726530864	2129.751386186999	2259.8452557905975	3131.2484550382283	3485.4419097385894	2975.4790674263018	3097.3919293846366	2727.8973834443764	2584.3359287037442	1.1064812393629335	1.1373071487672677	0.82410005701358	0.8744394374937529	1.211625942378476	1.3486798952978314	1.151351507510383	1.1985252749004003	1.055550616754626	1.0	11.335577897718354	-7.776324080871321	24.95245718572526	1.1797878523118612	0.9848850524808553	0.31689381879452283	0.12430796238040374	269.6832198014063	452090.50752750406	0.04071596371255774	0.04635429915765294	1.6736934600467356e-08	7.776324080871321	-0.1949027998310059	
(ac)MDAGFFRGT(ph)SAEQDNR	ddPTM_K562_Methotrexat_30min_R1	1	MDAGFFRGTSAEQDNR	16	1	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2;M0R1E7	A9Z1X7	SRRM1	Serine/arginine repetitive matrix protein 1	1	MDAGFFRGT(0.5)S(0.5)AEQDNR	54.7	0.020511	9928600.0	112.28	0.0	113.69	127.79	0.0	56.148999999999994	0.0	0.0	53.797	0.0	True	False	107.34430564027593	0.0	89.82802266577625	116.58684910677445	0.0	66.99899958572814	0.0	0.0	51.295989212190946	0.0											0.0														
(ac)MDEETRHS(ph)LECIQANQIFPR	ddPTM_K562_Methotrexat_30min_R1	1	MDEETRHSLECIQANQIFPR	20	1	Q13615-3;Q13615-2;Q13615;C9JLU3	Q13615-3	MTMR3	Myotubularin-related protein 3	1	MDEET(0.153)RHS(0.847)LECIQANQIFPR	75.064	0.0011692	8329100.0	386.38	397.07	830.15	443.04	595.81	310.52	373.66	514.41	438.03	462.57	True	False	369.3951978383489	462.6790684640068	655.9128596709843	404.1993710639752	674.1694583154436	370.5235952797078	457.46276676041475	496.31790872963666	417.6660809081547	378.79409060505435	0.9751873300037696	1.2214527099009425	1.7315815529837948	1.0670688405363995	1.7797781830191202	0.9781662503970536	1.2076818992337013	1.310257791870141	1.102620371508461	1.0	8.565270013925048														
(ac)MDLAAAAEPGAGS(ph)QHLEVR	ddPTM_K562_Methotrexat_30min_R1	4	MDLAAAAEPGAGSQHLEVR	19	0	Q14566	Q14566	MCM6	DNA replication licensing factor MCM6	1	MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR	159.26	1.1263e-27	145436400.0	66.15899999999999	0.0	121.25	0.0	0.0	0.0	0.0	0.0	0.0	66.694	True	False	63.2507295765498	0.0	95.80128197928907	0.0	0.0	0.0	0.0	0.0	0.0	54.61507032192642	1.1581186145824005	0.0	1.7541180742712978	0.0	0.0	0.0	0.0	0.0	0.0	1.0	5.7712271939947035	-7.366407935000177	24.159333403207672	0.08332470292624052	0.8746138555385391	0.35671892055552346	0.5000825472858331	24.968226694830026	5733.814414236347	0.1305066443062302	0.1935725238245476	4.301224045382448e-08	7.366407935000177	0.7912891526122986	
(ac)MDLETPEEMQARS(ph)LGR	ddPTM_K562_Methotrexat_30min_R1	1	MDLETPEEMQARSLGR	16	1	H7BZS0	H7BZS0	C19orf81		1	MDLETPEEMQARS(1)LGR	46.706	0.02479	12919000.0	68.895	0.0	0.0	127.51	147.25	137.66	124.21	0.0	158.91	119.31	True	False	65.86645829254371	0.0	0.0	116.33139627204643	166.61595598756168	164.26084672872778	152.06725434702977	0.0	151.52230878504864	97.70180286246206	0.6741580642607591	0.0	0.0	1.1906780925609923	1.7053519086245754	1.6812468338988893	1.5564426642269815	0.0	1.5508650234259385	1.0	6.6103132789513985	-7.271599505358107	21.794210260806572	1.2498668071792085	0.20224743089425995	0.46306737258685526	0.5010744093562642	107.85561252944531	231358.98423371528	0.14772309371719516	0.22283431739024817	5.350575475792859e-08	7.271599505358107	-1.0476193762849486	
(ac)MDLFGDLPEPERS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	3	MDLFGDLPEPERSPR	15	1	F8SNU6;E9PC05;F8SNU7;Q9H0C8	F8SNU6	ILKAP2;ILKAP;ILKAP3	Integrin-linked kinase-associated serine/threonine phosphatase 2C	1	MDLFGDLPEPERS(1)PR;MDLFGDLPEPERS(1)PR;MDLFGDLPEPERS(1)PR	85.988	0.0042982	9952100.0	322.636	349.78	350.647	312.09	142.39	327.91999999999996	205.93	409.49	283.11	365.231	True	False	308.45330775343825	407.57519975656754	277.0509865747776	284.72955425098405	161.1167808018262	391.28589902138907	252.11504458323677	395.08800459885873	269.9482778939973	299.08412673924965	1.0313262395979874	1.3627443361843927	0.9263312954629611	0.9520049002775051	0.5387005407421456	1.3082803935045462	0.8429569543924278	1.3209928888780784	0.9025830987324384	1.0	8.224407534259912	-6.781667151559685	24.9943858893704	0.9763744697378133	1.1970354046034684	0.13673185934641274	0.22412110682207098	409.2650254760496	505707.0412588455	0.057364405697374714	0.1196444106807938	1.6532283666328388e-07	6.781667151559685	0.22066093486565508	
(ac)MDLFGDLPEPERS(ph)PRPAAGK	ddPTM_K562_Methotrexat_30min_R1	1	MDLFGDLPEPERSPRPAAGK	20	2	F8SNU6;E9PC05;F8SNU7;Q9H0C8	F8SNU6	ILKAP2;ILKAP;ILKAP3	Integrin-linked kinase-associated serine/threonine phosphatase 2C	1	MDLFGDLPEPERS(1)PRPAAGK	40.798	0.031036	5434700.0	1909.7	1515.4	2532.8	1734.1	1439.4	1406.4	1429.9	1665.5	1616.3	1883.5	True	False	1825.7518746102146	1765.7940926042147	2001.1998927599448	1582.0741453639373	1628.7063297011634	1678.1668955345249	1750.5914740424912	1606.923420985613	1541.158565787391	1542.3798985118358	1.183723851932841	1.1448503019962462	1.2974753461782023	1.0257357132898324	1.0559696293193523	1.088037322811133	1.1349937040359177	1.0418467088011532	0.9992081505175066	1.0	10.590942439147147	-7.201891229214767	0.29676502705927904	0.9955776360933106	1.290940583309619	0.48737654884679527	0.06415922443436321	4.269539727738207	0.4769662870234961	0.08496348439518259	0.44126506866257037	6.282156782341915e-08	7.201891229214767	0.2953629472163084	
(ac)MDNYADLS(ph)DTELTTLLR	ddPTM_K562_Methotrexat_30min_R1	1	MDNYADLSDTELTTLLR	17	0	P50402;Q5HY57;F8WEQ1	P50402	EMD	Emerin	1	MDNYADLS(0.993)DT(0.006)ELTTLLR	178.12	3.285e-08	6811700.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)MDNYADLS(ph)DTELTTLLRR	ddPTM_K562_Methotrexat_30min_R1	2	MDNYADLSDTELTTLLRR	18	1	P50402;Q5HY57;F8WEQ1	P50402	EMD	Emerin	1	MDNYADLS(0.829)DT(0.17)ELT(0.001)TLLRR;MDNYADLS(0.968)DT(0.031)ELTTLLRR	89.23200000000001	0.0011581	119597000.0	244.113	0.0	0.0	0.0	0.0	0.0	145.94	129.44	120.8	0.0	True	False	233.38208481265295	0.0	0.0	0.0	0.0	0.0	178.67075999843422	124.8875218327096	115.18403436683585	0.0											0.0														
(ac)MDTQAGS(ph)VDEENGR	ddPTM_K562_Methotrexat_30min_R1	1	MDTQAGSVDEENGR	14	0	Q9UBL3-2;Q9UBL3-3	Q9UBL3-2			1	MDTQAGS(1)VDEENGR	157.23	4.1023e-13	9904600.0	100.15	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	95.74752591622403	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)MDVAES(ph)PERDPHS(ph)PEDEEQPQGLSDDDILR	ddPTM_K562_Methotrexat_30min_R1	1	MDVAESPERDPHSPEDEEQPQGLSDDDILR	30	1	E7ERS3;Q86VM9;H3BPD0	E7ERS3	ZC3H18	Zinc finger CCCH domain-containing protein 18	2	MDVAES(0.979)PERDPHS(0.979)PEDEEQPQGLS(0.041)DDDILR	52.122	0.00030474	15094000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	86.58	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	83.53493232598885	0.0	0.0											0.0														
(ac)MDVAES(ph)PERDPHSPEDEEQPQGLSDDDILR	ddPTM_K562_Methotrexat_30min_R1	2	MDVAESPERDPHSPEDEEQPQGLSDDDILR	30	1	E7ERS3;Q86VM9;H3BPD0	E7ERS3	ZC3H18	Zinc finger CCCH domain-containing protein 18	1	MDVAES(0.5)PERDPHS(0.5)PEDEEQPQGLSDDDILR;MDVAES(0.944)PERDPHS(0.056)PEDEEQPQGLSDDDILR	76.237	2.2373e-05	116298000.0	115.91	137.77	317.98	192.8	44.342	105.93	0.0	135.97	148.77	61.458	True	False	110.81473518671518	160.53415081040177	251.240343453809	175.8975233413109	50.173750223432634	126.39947329633979	0.0	131.1878580314703	141.85371517180604	50.327360659803794	2.2018785355303234	3.189798723910026	4.992122379556323	3.4950675146729746	0.9969477748414125	2.511545839861505	0.0	2.6066906015250146	2.8186201960935313	1.0	5.6532710348072825	-7.746007780812209	24.47613537858431	1.6959826159819715	3.558466920844635	0.42477040989809245	1.031498065826351	186.22898967955715	295376.9826707775	0.3113225242688804	0.40031784857439406	1.794701472704844e-08	7.746007780812209	1.8624843048626634	
(ac)MEAVNLLSSNRYT(ph)EK	ddPTM_K562_Methotrexat_30min_R1	1	MEAVNLLSSNRYTEK	15	1	E9PPZ3;E9PS94;E9PQP4	E9PPZ3	AP2A2		1	MEAVNLLSSNRY(0.392)T(0.608)EK	82.831	0.027743	7831100.0	8088.0	5709.6	11575.0	8989.8	6398.8	6367.5	5458.5	7661.4	8036.2	10209.0	True	False	7732.461204297753	6653.014353393839	9145.565681734191	8201.678191564917	7240.354357712797	7597.9292571928945	6682.707574698191	7391.944219477145	7662.598816049389	8360.051172767373	0.9249298891238876	0.7958102427728962	1.093960490520155	0.9810559794516149	0.8660657941063857	0.9088376494563731	0.7993620417620073	0.8841984416980834	0.9165731952706324	1.0	13.02929605788592	-7.768708993415675	24.99928298736854	0.8858754718756341	0.948360040221697	0.08267057613032858	0.08274222885337792	394.0141704095916	1354961.8128561503	0.026125464063856508	0.030228882040191647	1.703299451571996e-08	7.768708993415675	0.06248456834606286	
(ac)MEDLDQS(ph)PLVSSSDSPPRPQPAFK	ddPTM_K562_Methotrexat_30min_R1	1	MEDLDQSPLVSSSDSPPRPQPAFK	24	1	Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4	Q9NQC3-5	RTN4	Reticulon-4	1	MEDLDQS(0.722)PLVS(0.045)S(0.229)S(0.003)DSPPRPQPAFK	95.429	7.0076e-10	96041000.0	4453.3	3364.5	5442.2	5315.4	3935.7	3423.8	3471.6	5305.3	5093.0	5814.7	True	False	4257.538264230858	3920.426438278262	4299.956592063396	4849.407134690889	4453.313534670604	4085.400893722346	4250.194671855311	5118.709591927332	4856.227541641514	4761.601484404978	0.894139981721484	0.8233419892694294	0.9030483979279778	1.0184403609948225	0.9352554070843461	0.8579888315103019	0.8925977290992101	1.0749974790397605	1.019872737680054	1.0	12.21723116597356	-9.253913630937037	24.722086861385815	1.035576333004434	0.9043274216353708	0.5695801919979577	0.05098384352027243	375.3380400659619	1232991.0491092089	0.027060229878645613	0.015205526447009057	5.572965686604244e-10	9.253913630937037	-0.13124891136906325	
(ac)MEDLDQSPLVS(ph)SSDSPPRPQPAFK	ddPTM_K562_Methotrexat_30min_R1	2	MEDLDQSPLVSSSDSPPRPQPAFK	24	1	Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4	Q9NQC3-5	RTN4	Reticulon-4	1	MEDLDQS(0.001)PLVS(0.472)S(0.472)S(0.055)DSPPRPQPAFK;MEDLDQS(0.057)PLVS(0.463)S(0.463)S(0.017)DSPPRPQPAFK	102.47	8.994400000000001e-17	542660000.0	7626.900000000001	5675.7	7866.0	7667.6	5565.8	6255.799999999999	5382.4	7343.7	7234.299999999999	8273.4	True	False	7291.630608192206	6613.512954595317	6215.03409525021	6995.39341271699	6297.800256947846	7464.6448130580775	6589.540212522767	7085.417908551214	6897.978972019873	6775.0070891148525	1.0762543141700018	0.9761632523191006	0.9173472460620256	1.0325293126196464	0.9295636409098793	1.1017914394586006	0.9726248439075337	1.0458170471784578	1.0181508124327419	1.0	12.726006740711695	-8.24399920672949	24.977444183896115	1.027099655889282	0.9845340691847612	0.13156024820872525	0.05294640734261106	1707.5868584512734	2445568.7578277276	0.016857882954287803	0.016819277502993592	5.701653137282801e-09	8.24399920672949	-0.04256558670452082	
(ac)MEDLDQSPLVSS(ph)SDSPPRPQPAFK	ddPTM_K562_Methotrexat_30min_R1	3	MEDLDQSPLVSSSDSPPRPQPAFK	24	1	Q9NQC3-5;Q9NQC3;Q9NQC3-2;Q9NQC3-4	Q9NQC3-5	RTN4	Reticulon-4	1	MEDLDQS(0.001)PLVS(0.246)S(0.631)S(0.107)DS(0.015)PPRPQPAFK;MEDLDQS(0.105)PLVS(0.155)S(0.666)S(0.01)DS(0.065)PPRPQPAFK;MEDLDQSPLVS(0.052)S(0.947)S(0.001)DSPPRPQPAFK	129.89	9.2097e-17	616366000.0	11074.4	8707.0	13955.9	12690.7	9604.3	8499.9	9268.1	12051.4	11698.4	13206.4	True	False	10587.58263611215	10145.683756305205	11026.74730865782	11578.12603458285	10867.433793489563	10142.385377811377	11346.70735056523	11627.545431201448	11154.543937392318	10814.592987367521	0.9790088862779635	0.9381475352938695	1.0196174115418042	1.0706021066264082	1.0048860651698834	0.9378425419855054	1.049203364733122	1.0751718020995829	1.031434465487688	1.0	13.400691749319428	-6.808907827198641	8.221314120797132	1.0252868819072245	0.9586948762257737	0.3142848711841698	0.03836196269569231	0.27980951047089775	43.352737778153376	0.01083103859844963	0.02288996068785043	1.5527165168956928e-07	6.808907827198641	-0.06659200568145085	
(ac)MEEAS(ph)EGGGNDRVR	ddPTM_K562_Methotrexat_30min_R1	1	MEEASEGGGNDRVR	14	1	B8ZZT4;Q9BV40	B8ZZT4	VAMP8	Vesicle-associated membrane protein 8	1	MEEAS(1)EGGGNDRVR	102.33	4.702e-08	8250100.0	0.0	0.0	133.05	0.0	0.0	0.0	71.331	0.0	0.0	0.0	True	False	0.0	0.0	105.12462323583019	0.0	0.0	0.0	87.328792527397	0.0	0.0	0.0											0.0														
(ac)MEEGGRDKAPVQPQQS(ph)PAAAPGGTDEKPSGK	ddPTM_K562_Methotrexat_30min_R1	4	MEEGGRDKAPVQPQQSPAAAPGGTDEKPSGK	31	3	Q13200;F8WBS8;C9JPC0	Q13200	PSMD2	26S proteasome non-ATPase regulatory subunit 2	1	MEEGGRDKAPVQPQQS(0.998)PAAAPGGT(0.002)DEKPS(0.001)GK;MEEGGRDKAPVQPQQS(0.998)PAAAPGGT(0.002)DEKPSGK;MEEGGRDKAPVQPQQS(0.998)PAAAPGGT(0.002)DEKPSGK;MEEGGRDKAPVQPQQS(0.998)PAAAPGGT(0.002)DEKPSGK	43.835	2.3678e-07	143938000.0	10373.1	6777.009999999999	18716.4	12796.400000000001	6868.299999999999	5743.620000000001	5368.24	7719.39	8083.9	15612.2	True	False	9917.11094439923	7896.795713026062	14788.083414739518	11674.559479692689	7771.601837075517	6853.493276827372	6572.204472070682	7447.894678308096	7708.081253460794	12784.67929468887	0.7757027545086006	0.6176764806534194	1.1567035100272651	0.9131679575679807	0.6078839881657467	0.5360708015315263	0.5140687787765601	0.582564060203072	0.6029154956325699	1.0	13.642128350393767	-7.767407713167114	24.810596317753927	0.6081606040330901	0.8688665886290451	0.2621218609675954	0.18023867208774985	157.0966714629169	653055.9802745507	0.05540186428614594	0.0644684000706796	1.708410715838709e-08	7.767407713167114	0.26070598459595495	
(ac)MEEIDRFQDPAAASIS(ph)DGDCDAR	ddPTM_K562_Methotrexat_30min_R1	2	MEEIDRFQDPAAASISDGDCDAR	23	1	Q8IW50-3;A0A0A0MRW1;Q8IW50-2;A0A0A0MRW0;Q8IW50-4	Q8IW50-3	FAM219A		1	MEEIDRFQDPAAAS(0.196)IS(0.804)DGDCDAR;MEEIDRFQDPAAAS(0.165)IS(0.835)DGDCDAR	57.045	0.0018863	325250000.0	0.0	0.0	64.681	288.78999999999996	0.0	48.037	57.818999999999996	65.146	209.502	63.428000000000004	True	False	0.0	0.0	51.10534201816408	263.4722290754001	0.0	57.3194703930546	70.7863825705733	62.8547782548957	199.76229774768908	51.9405745701135	0.0	0.0	0.9839194587494993	5.072570553098992	0.0	1.103558650774651	1.3628340301669215	1.2101286667526048	3.8459778198647787	1.0	5.69879006818109	-7.001225582945424	23.726690746310354	1.9045466812041867	0.12298794115292955	0.2357648995552991	1.4035147219433808	36.67567258848554	710153.5187673643	0.3694598066848884	0.7515529128405771	9.971819691041132e-08	7.001225582945424	-1.7815587400512571	
(ac)MEEQPQMQDADEPADS(ph)GGEGR	ddPTM_K562_Methotrexat_30min_R1	2	MEEQPQMQDADEPADSGGEGR	21	0	D6RBJ6;B3KVZ3;Q9H3R5	D6RBJ6	CENPH	Centromere protein H	1	MEEQPQMQDADEPADS(1)GGEGR;MEEQPQMQDADEPADS(1)GGEGR	145.9	1.2546e-18	17229500.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)MEQALT(ph)GEAQSR	ddPTM_K562_Methotrexat_30min_R1	1	MEQALTGEAQSR	12	0	Q75WM6	Q75WM6	H1FNT	Testis-specific H1 histone	1	MEQALT(0.89)GEAQS(0.11)R	52.495	0.0047477	0.0	251.38	285.14	278.62	209.33	269.09	272.1	256.26	253.25	307.3	227.64	True	False	240.32963619391302	332.25453844870395	220.1414695675837	190.97836390579158	304.4800515904444	324.6794740293975	313.73282826640235	244.34305395653354	293.0136900739127	186.41219012329944	1.2892377694556925	1.782364866959287	1.1809392369778744	1.02449503854588	1.6333698530608478	1.7417287668507264	1.6830059668248556	1.310767572629862	1.5718590607197058	1.0	7.542352395557662	-12.179168586785305	4.419757240753385	0.9998907864991271	1.4708816381814704	0.24965759473587656	0.24370764472329243	208901515.09549868	49.451527250186544	235825.65745567795	0.0619897093223702	6.619594907985472e-13	12.179168586785305	0.47099085168234334	
(ac)MES(ph)RDPAQPMSPGEATQSGAR	ddPTM_K562_Methotrexat_30min_R1	3	MESRDPAQPMSPGEATQSGAR	21	1	Q9BQG0-2;Q9BQG0	Q9BQG0-2	MYBBP1A	Myb-binding protein 1A	1	MES(0.686)RDPAQPMS(0.313)PGEAT(0.001)QSGAR;MES(0.751)RDPAQPMS(0.248)PGEAT(0.001)QSGAR;MES(0.924)RDPAQPMS(0.076)PGEAT(0.001)QSGAR	77.192	0.00069771	42359000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)MET(ph)MASPGKDNYR	ddPTM_K562_Methotrexat_30min_R1	4	METMASPGKDNYR	13	1	S4R3E5;O60684	S4R3E5	KPNA6	Importin subunit alpha-7	1	MET(0.995)MAS(0.005)PGKDNYR;MET(0.816)MAS(0.184)PGKDNYR;MET(0.669)MAS(0.331)PGKDNYR;MET(0.98)MAS(0.02)PGKDNYR	106.54	0.00038579	403369000.0	11894.400000000001	10410.099999999999	14367.5	14070.5	10118.8	10101.3	9519.0	12023.2	12332.2	14829.899999999998	True	False	11371.536417952417	12130.19208355492	11351.958093504618	12836.961110860546	11449.599561609095	12053.233263554399	11653.878062389304	11600.337241185367	11758.878713730897	12144.061405330856	0.9363866039874168	0.9988579338235356	0.9347744312723476	1.0570566701207167	0.9428146959618539	0.9925207771317274	0.9596359630785153	0.955227156220833	0.9682822180534367	1.0	13.567963370288847	-8.135857370891566	0.001392042996311909	1.9482721570636976	6.198088405752129e-06	0.021840647657568546	0.035727609620592585	1248434.925140038	625.5433054641743	435938.83789931197	439548.9504018088	7.313792404407665e-09	8.135857370891566	-1.9482659589752918	
(ac)METMAS(ph)PGKDNYR	ddPTM_K562_Methotrexat_30min_R1	2	METMASPGKDNYR	13	1	S4R3E5;O60684	S4R3E5	KPNA6	Importin subunit alpha-7	1	MET(0.371)MAS(0.629)PGKDNYR;MET(0.011)MAS(0.989)PGKDNYR	88.101	0.00039284	57876100.0	5849.7	4760.9	7786.1	6707.6	5245.3	4354.299999999999	4556.9	6284.1	6176.200000000001	6893.3	True	False	5592.554192233005	5547.557803536631	6151.904013352105	6119.555122220831	5935.14888924657	5195.706849563416	5578.90082387875	6063.084641138212	5889.06981006996	5644.856572557283	0.990734506775859	0.9827632876460185	1.0898246809776984	1.084093996643124	1.0514259862864463	0.9204320398187922	0.9883157795365113	1.0740901142845973	1.0432629659183779	1.0	12.4627212093824														
(ac)MEVAEPS(ph)S(ph)PTEEEEEEEEHSAEPRPR	ddPTM_K562_Methotrexat_30min_R1	1	MEVAEPSSPTEEEEEEEEHSAEPRPR	26	1	M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8;M0R3H9	M0QXG9	BABAM1	BRISC and BRCA1-A complex member 1	2	MEVAEPS(0.884)S(0.558)PT(0.558)EEEEEEEEHSAEPRPR	67.785	1.7086e-05	32814000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)MEVAEPS(ph)SPT(ph)EEEEEEEEHSAEPRPR	ddPTM_K562_Methotrexat_30min_R1	1	MEVAEPSSPTEEEEEEEEHSAEPRPR	26	1	M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8;M0R3H9	M0QXG9	BABAM1	BRISC and BRCA1-A complex member 1	2	MEVAEPS(0.813)S(0.375)PT(0.813)EEEEEEEEHSAEPRPR	52.522	0.00016307	14985000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	62.019	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	59.13575022679461	0.0											0.0														
(ac)MEVAEPS(ph)SPTEEEEEEEEHSAEPRPR	ddPTM_K562_Methotrexat_30min_R1	6	MEVAEPSSPTEEEEEEEEHSAEPRPR	26	1	M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8;M0R3H9	M0QXG9	BABAM1	BRISC and BRCA1-A complex member 1	1	MEVAEPS(0.46)S(0.46)PT(0.079)EEEEEEEEHSAEPRPR;MEVAEPS(0.459)S(0.459)PT(0.081)EEEEEEEEHSAEPRPR;MEVAEPS(0.333)S(0.333)PT(0.333)EEEEEEEEHSAEPRPR;MEVAEPS(0.454)S(0.454)PT(0.091)EEEEEEEEHSAEPRPR;MEVAEPS(0.333)S(0.333)PT(0.333)EEEEEEEEHSAEPRPR;MEVAEPS(0.381)S(0.381)PT(0.238)EEEEEEEEHSAEPRPR	140.84	6.6585e-26	862943000.0	236.25	61.841	440.44	390.44000000000005	280.31	70.831	263.2	225.29500000000002	150.7	210.09	True	False	225.86473287776255	72.05917413272886	347.9976629687263	356.2107313972066	317.1756782538091	84.51808829465728	322.229299928655	217.3712471515784	143.69398989306424	172.0406651862765	1.312856658820798	0.41884966007720914	2.0227639935705484	2.070503104667263	1.8436087648835124	0.49126808596761457	1.87298334134992	1.2634875999591162	0.8352327034860044	1.0	7.426605804285986	-9.613473201640597	5.038502746099522	0.9301694657162237	1.430337787789857	0.11884918431833247	0.5534435237486676	0.4932592619461762	20.621389699606787	0.41872539531766445	0.14867180510975198	2.4351560578452453e-10	9.613473201640597	0.5001683220736334	
(ac)MEVKPPPGRPQPDS(ph)GR	ddPTM_K562_Methotrexat_30min_R1	1	MEVKPPPGRPQPDSGR	16	2	P51991	P51991	HNRNPA3	Heterogeneous nuclear ribonucleoprotein A3	1	MEVKPPPGRPQPDS(1)GR	65.51100000000001	0.0034728000000000003	16986000.0	4965.1	4328.5	5999.9	4760.5	3934.7	3916.2	4352.2	5294.0	5329.4	6018.2	True	False	4746.840149042872	5043.711053079942	4740.602983484836	4343.154356153062	4452.1820171426725	4672.950224894988	5328.291638105973	5107.807019332238	5081.637357240188	4928.245662449659	0.9631906512313316	1.023429309035883	0.9619250557263105	0.8812779746848559	0.9034009913640645	0.9481975016992614	1.0811741140877837	1.0364351473488287	1.0311250098507232	1.0	12.266858457733106	-8.74377393101645	24.289611328805996	1.0402198151415027	0.9461044048825562	0.5504269569824694	0.03992960364981347	142.27261241947	195621.6575746441	0.01715347612249108	0.013253771547905599	1.8039565335722042e-09	8.74377393101645	-0.09411541025894654	
(ac)MFPAAPS(ph)PRT(ph)PGTGSR	ddPTM_K562_Methotrexat_30min_R1	2	MFPAAPSPRTPGTGSR	16	1	Q8WUM0	Q8WUM0	NUP133	Nuclear pore complex protein Nup133	2	MFPAAPS(0.52)PRT(0.558)PGT(0.355)GS(0.566)R;MFPAAPS(0.927)PRT(0.913)PGT(0.085)GS(0.075)R	86.411	0.00012213	23337000.0	380.38	540.9	790.6700000000001	526.21	734.78	512.3299999999999	399.54	418.81	434.37	554.51	True	False	363.65895065415174	630.2745312720203	624.7191721448617	480.07798629373013	831.4164491717522	611.3305216077953	489.14701555279174	404.0802149162322	414.17623350929205	454.0828656882394	0.8008647278574695	1.3880165469726162	1.3757823061612204	1.0572475258807459	1.8309795678187504	1.3462972681896297	1.0772197158582646	0.8898821018136861	0.9121159700257306	1.0	8.826811789071693	-8.93057078865703	3.6694568683239663	0.9320532453542405	1.3193876630668142	0.30736906776902084	0.24817888901583032	0.2794393740820162	7.530021064214641	0.11527547004448803	0.07303545980888497	1.1733544137640158e-09	8.93057078865703	0.3873344177125737	
(ac)MHGHGGY(ph)DSDFS(ph)DDER	ddPTM_K562_Methotrexat_30min_R1	3	MHGHGGYDSDFSDDER	16	0	Q70Z53-2;Q70Z53-4;Q70Z53-5;Q70Z53-3;Q70Z53	Q70Z53-2	FRA10AC1	Protein FRA10AC1	2	MHGHGGY(0.511)DS(0.497)DFS(0.993)DDER;MHGHGGY(0.575)DS(0.517)DFS(0.907)DDER;MHGHGGY(0.611)DS(0.498)DFS(0.89)DDER	65.298	0.00047877	34123000.0	751.724	854.04	648.0699999999999	873.3900000000001	837.25	806.622	860.63	626.93	462.555	658.34	True	False	718.6791130489028	995.1555938021014	512.0489634005593	796.8212547254539	947.3630502586489	962.4902855587674	1053.6481854012095	604.8805165526933	441.05091901118976	539.1082465549682	1.3330887027631941	1.8459290878249142	0.9498073284403934	1.4780357373817483	1.757277979538483	1.7853377159583674	1.954427876283243	1.122001973477545	0.8181119873969868	1.0	9.07443116792649	-9.465467139395594	6.351223501695296	0.9259252418890767	1.5810462555104892	0.5095538909062532	0.27760355173683265	0.1817913377904512	15.83426541956485	0.16566952410391836	0.07654670276844279	3.423992940622096e-10	9.465467139395594	0.6551210136214125	
(ac)MHGHGGYDS(ph)DFS(ph)DDER	ddPTM_K562_Methotrexat_30min_R1	1	MHGHGGYDSDFSDDER	16	0	Q70Z53-2;Q70Z53-4;Q70Z53-5;Q70Z53-3;Q70Z53	Q70Z53-2	FRA10AC1	Protein FRA10AC1	2	MHGHGGY(0.103)DS(0.903)DFS(0.994)DDER	61.692	0.00054098	6731500.0	391.51	507.81	502.76	614.65	595.96	668.95	522.88	391.88	539.24	450.12	True	False	374.2996891808375	591.7169712058513	397.2375466219163	560.7645888056886	674.3391859446332	798.2151199998732	640.1491502534003	378.0973582803014	514.1708500991105	368.59890624802097	1.01546608749018	1.605313963703679	1.0776959450732204	1.5213408919568638	1.8294660524328503	2.1655384931141772	1.7367093048905033	1.0257690727543538	1.3949331953609698	1.0	8.525907979807656	-7.429909481945749	7.45772957327658	1.5785950609561097	1.2720875266754599	0.10641035671802912	0.36350463611022266	0.6345266187428569	44.80333155535033	0.10930831938949455	0.1622585466578062	3.716126745919023e-08	7.429909481945749	-0.3065075342806498	
(ac)MHPAGLAAAAAGT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	MHPAGLAAAAAGTPR	15	0	Q5BJH7-4;Q5BJH7-5;Q5BJH7-3;Q5BJH7	Q5BJH7-4	YIF1B	Protein YIF1B	1	MHPAGLAAAAAGT(1)PR;MHPAGLAAAAAGT(1)PR	90.259	0.0026249000000000003	29076000.0	1911.9	1354.0900000000001	1932.7800000000002	1969.2600000000002	1405.1	1448.48	1266.16	1266.31	1774.6799999999998	1986.96	True	False	1827.8551652444198	1577.8303569054	1527.1158910014879	1796.6180332733911	1589.8952784931948	1728.3782599856734	1550.12861093338	1221.7731595486594	1692.175514156757	1627.1022899639393	1.1233806113596765	0.9697179867778127	0.9385494080002387	1.1041825977106878	0.977132961031252	1.0622431488459023	0.9526927842795518	0.7508889681273431	1.0399933210064254	1.0	10.668089235478869	-8.982619073564702	11.164438773932071	0.9076505980883923	1.0221342098412698	0.1935557648512526	0.08998219438375815	0.6095111852015961	384.7455766997564	0.036121601995224205	0.02413539037520563	1.0408326960967012e-09	8.982619073564702	0.11448361175287747	
(ac)MHRAPS(ph)PTAEQPPGGGDSAR	ddPTM_K562_Methotrexat_30min_R1	1	MHRAPSPTAEQPPGGGDSAR	20	1	Q15742-2;Q15742-3;Q15742	Q15742-2	NAB2	NGFI-A-binding protein 2	1	MHRAPS(0.781)PT(0.219)AEQPPGGGDSAR	49.768	0.0026291	6394300.0	0.0	205.58	259.92	225.25	220.93	165.67	187.71	377.25	169.35	152.28	True	False	0.0	239.54860073747824	205.36634401696344	205.5026822231861	249.98616744537864	197.683382809446	229.80874578118474	363.9819036726643	161.4769554637719	124.70061637662994	0.0	1.9209897087755845	1.6468751316890125	1.6479684559257657	2.004690712116066	1.5852638788278972	1.842883800085635	2.9188460670742757	1.2949170593998298	1.0	6.962324785987293	-6.259495486498405	24.867951888068628	1.8198072907457548	7.626635578679531e-07	0.5444101507889506	0.48113169714728254	116.02296974035414	1484145.2572951743	0.11453668185735376	0.7244486819012184	5.501796383447533e-07	6.259495486498405	-1.819806528082197	
(ac)MHRAPS(ph)PTAEQPPGGGDSARR	ddPTM_K562_Methotrexat_30min_R1	1	MHRAPSPTAEQPPGGGDSARR	21	2	Q15742-2;Q15742-3;Q15742	Q15742-2	NAB2	NGFI-A-binding protein 2	1	MHRAPS(0.809)PT(0.191)AEQPPGGGDSARR	48.376000000000005	0.0046176	4241300.0	0.0	0.0	120.67	244.95	185.6	205.93	0.0	117.41	0.0	187.14	True	False	0.0	0.0	95.34301605312008	223.47561380940923	210.00965318364297	245.72305801864687	0.0	113.28062375137847	0.0	153.24713257632337	0.0	0.0	0.6221520393253384	1.4582694635288473	1.3703985820357816	1.6034431045309556	0.0	0.7392022405049573	0.0	1.0	7.2597162695203385	-6.857197984258305	4.023586744882117	0.8937121264333753	4.288807774300909e-08	0.3084387944831387	0.5189319029988604	0.27291616303651056	8.117205711093213	0.14936545510471186	0.3471241499370258	1.3893191301309107e-07	6.857197984258305	-0.8937120835452975	
(ac)MHRDS(ph)CPLDCK	ddPTM_K562_Methotrexat_30min_R1	1	MHRDSCPLDCK	11	1	A0A087X2D0;P84103-2;P84103	A0A087X2D0	SRSF3	Serine/arginine-rich splicing factor 3	1	MHRDS(1)CPLDCK	51.643	0.027775	11866000.0	3924.0	2799.6	4882.0	4247.2	3923.0	3330.1	3358.3	4211.6	4039.1	4900.3	True	False	3751.505658464934	3262.186314936492	3857.3349164774345	3874.8545702033985	4438.943262065905	3973.594694837544	4111.484262729492	4063.4756408423955	3851.3231226083344	4012.808185122141	0.9348828763791875	0.8129434960363545	0.9612557437404713	0.9656216772508045	1.106193731991402	0.9902279180873921	1.024590280186629	1.0126264335056205	0.9597575924230499	1.0	11.970396480653681	-7.078370591118023	2.5343904996836146	1.0140017317005614	0.8752064553676435	0.5414998199145005	0.048019555549332724	0.19466620519742323	2.4441145134148616	0.01320008698753049	0.028682923294897515	8.348902876186157e-08	7.078370591118023	-0.13879527633291788	
(ac)MIDLWLYS(ph)YQR	ddPTM_K562_Methotrexat_30min_R1	1	MIDLWLYSYQR	11	0	Q8IYH5-3	Q8IYH5-3	ZZZ3	ZZ-type zinc finger-containing protein 3	1	MIDLWLY(0.292)S(0.415)Y(0.292)QR	61.961999999999996	0.0065755	6453700.0	0.0	0.0	150.41	143.72	53.739	161.71	0.0	0.0	114.02	66.76	True	False	0.0	0.0	118.84099647426696	131.120290739695	60.80662043338251	192.95816885444273	0.0	0.0	108.71923508697536	54.66911708237336	0.0	0.0	2.1738232262870065	2.3984343947265128	1.1122663704585056	3.5295643894102158	0.0	0.0	1.9886773536722995	1.0	5.7726541707876295	-6.745272938268934	24.52316272501888	1.5231628776156236	6.350075507162519e-06	0.2614761792717325	1.0253973198141642	273.7964920527526	415318.2643766194	0.2718386146533673	0.7140665284293138	1.7977407454291327e-07	6.745272938268934	-1.5231565275401164	
(ac)MKIDAFHYVQLGT(ph)AYR	ddPTM_K562_Methotrexat_30min_R1	1	MKIDAFHYVQLGTAYR	16	1	C9J036;Q9H857-4	C9J036	NT5DC2		1	MKIDAFHY(0.01)VQLGT(0.826)AY(0.164)R	49.988	0.025056000000000002	21386000.0	99.45200000000001	0.0	114.94	0.0	58.085	0.0	0.0	0.0	177.82	0.0	True	False	95.0802091604624	0.0	90.815664748037	0.0	65.72419560976242	0.0	0.0	0.0	169.55318701250613	0.0											0.0														
(ac)MMWAS(ph)T(ph)TNYASTPSSTS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	MMWASTTNYASTPSSTSR	18	0	H3BVB0	H3BVB0	NDRG4		3	MMWAS(0.882)T(0.953)T(0.086)NY(0.044)AS(0.027)T(0.026)PS(0.032)S(0.048)T(0.045)S(0.858)R	44.831	0.032996	0.0	362.67	328.46	442.17	399.13	298.61	338.94	421.48	446.54	366.08	428.36	True	False	346.72746104879667	382.73243213460523	349.3645596105752	364.138892589302	337.8824490149121	404.4353580577873	516.0076190498842	430.8349350987184	349.0610207037353	350.7798531067325	0.9884474777498045	1.0910901203272654	0.9959652942333417	1.038083827689228	0.9632321982645449	1.152960623239468	1.4710298053887305	1.2282202962426905	0.995099968291297	1.0	8.454422079354172	-8.423991926282804	5.833006841206078	1.208195143507846	1.0212571259078342	0.24355643647207537	0.1299442723415328	0.2913688425628403	14.109766588439792	0.04714117720441977	0.0412250454042347	3.76710802131167e-09	8.423991926282804	-0.18693801760001172	
(ac)MNLEQERPFVCS(ph)APGCS(ph)QR	ddPTM_K562_Methotrexat_30min_R1	1	MNLEQERPFVCSAPGCSQR	19	1	H9KVC5;Q02930-2;Q02930	H9KVC5	CREB5	Cyclic AMP-responsive element-binding protein 5	2	MNLEQERPFVCS(1)APGCS(1)QR	43.208	0.01265	0.0	373.1	512.13	513.34	412.85	413.3	411.8	494.47	548.72	440.72	637.71	True	False	356.698970737326	596.7507777784065	405.5969492061712	376.6560814909761	467.656194293102	491.37452188646046	605.3674845582144	529.4212065825434	420.2310233952969	522.2145394637557	0.6830506310751286	1.1427310667971624	0.7766864354689642	0.7212669372969802	0.8955250360767859	0.9409437783770559	1.159231386356737	1.0138002038897422	0.8047095429913111	1.0	9.028498815407572	-8.287555501384807	3.3024888592426525	0.9996727222193164	0.8474004985879441	0.20060196285411813	0.141978197379613	0.43266133755109665	9.804243599515626	0.05269342222364601	0.04812593712520275	5.1575624893380754e-09	8.287555501384807	-0.15227222363137227	
(ac)MNLLPNIES(ph)PVTR	ddPTM_K562_Methotrexat_30min_R1	2	MNLLPNIESPVTR	13	0	E9PM69;P17980	E9PM69	PSMC3	26S protease regulatory subunit 6A	1	MNLLPNIES(0.953)PVT(0.047)R;MNLLPNIES(0.737)PVT(0.263)R	163.99	0.00040225	26699100.0	116.84800000000001	244.36	244.38	321.12	344.65999999999997	224.992	203.99	411.84000000000003	264.62	316.28	True	False	111.71150182984469	284.7363365901848	193.08797765029823	292.96790817096326	389.9888311760473	268.468519738413	249.7399501992642	397.355353766866	252.31787395821272	258.9986271841378	0.4313208260768974	1.0993739221163845	0.7455173787968394	1.1311562202322976	1.505756364101423	1.0365634855181782	0.9642520229333454	1.5341986870237814	0.9742054492776314	1.0	8.01680064073719	-6.07151568082468	0.934233611900074	1.1744456739541174	1.415602797627014e-12	0.4265336602657811	0.23240280758281767	2.8040983749686306	1.5375485244798386	0.07790611926438144	3.6242694714274633	8.481727574065586e-07	6.07151568082468	-1.1744456739527018	
(ac)MNNTAAS(ph)PMSTATSSSGR	ddPTM_K562_Methotrexat_30min_R1	4	MNNTAASPMSTATSSSGR	18	0	O75486	O75486	SUPT3H	Transcription initiation protein SPT3 homolog	1	MNNTAAS(0.997)PMS(0.002)TATSSSGR;MNNTAAS(0.986)PMS(0.01)T(0.004)ATSSSGR;MNNT(0.008)AAS(0.974)PMS(0.013)T(0.004)AT(0.001)SSSGR;MNNT(0.001)AAS(0.859)PMS(0.107)T(0.026)AT(0.005)S(0.001)S(0.001)SGR	134.33	8.1996e-15	15692700.0	153.67	71.602	233.24	182.31	177.21	157.81	144.66	239.96	0.0	279.77	True	False	146.91485079926258	83.43301347409731	184.28611141319072	166.32716535453517	200.51622112431784	188.30454905027267	177.1036874151946	231.52047078937727	0.0	229.10094197327143	0.6412668997947757	0.36417577664884154	0.8043882745566837	0.7259994826819179	0.8752308890450198	0.8219283056122992	0.773037796744881	1.0105609727976943	0.0	1.0	7.839839580226014	-6.774688442606408	24.89275067994837	0.7585784062634668	0.5027213157504542	0.1152192740540412	0.27506374809842116	386.6173078846766	726391.513148739	0.06825537575311404	0.14344064929749956	1.6800088030862952e-07	6.774688442606408	-0.25585709051301264	
(ac)MNT(ph)GRDSQSPDSAK	ddPTM_K562_Methotrexat_30min_R1	1	MNTGRDSQSPDSAK	14	1	C9J348;H7BXR3;O94875-5;O94875-2;O94875-4	C9J348	SORBS2		1	MNT(0.889)GRDS(0.074)QS(0.036)PDS(0.001)AK	55.898999999999994	0.030204	0.0	885.41	736.05	859.46	772.38	672.58	741.47	665.39	895.95	977.0	1081.3	True	False	846.488436559999	857.6697517891863	679.0710912158329	704.666644597312	761.036058934562	884.7485836404896	814.6206454389346	864.4389306707056	931.5794832483323	885.4660919887701	0.95598063462687	0.9686082386992902	0.7669080695011472	0.7958143750198499	0.8594751011021367	0.999189682863328	0.9199907854283662	0.9762530022230019	1.052078099519306	1.0	9.79029325129027	-8.258487495659654	24.60662732991182	0.9836736583677631	0.8650938805471104	0.4559758116562378	0.06537915467434757	224.15800489113767	1868564.0347159992	0.024346049061046628	0.023347924479707148	5.514580799038752e-09	8.258487495659654	-0.11857977782065265	
(ac)MNTAPSRPS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	4	MNTAPSRPSPTR	12	1	Q9HCD5	Q9HCD5	NCOA5	Nuclear receptor coactivator 5	1	MNTAPS(0.086)RPS(0.543)PT(0.371)R;MNTAPS(0.008)RPS(0.855)PT(0.137)R;MNTAPS(0.019)RPS(0.859)PT(0.122)R;MNTAPS(0.025)RPS(0.822)PT(0.152)R	95.18299999999999	2.2158000000000002e-08	182764100.0	135.94	190.39	109.24	288.397	108.86	62.324	177.933	172.5	0.0	319.43600000000004	True	False	129.96424036996	221.84871142333148	86.31201685292812	263.11368277522854	123.17699809036309	74.36723094233061	217.83900465123608	166.4330772260693	0.0	261.5830450018728	0.49683740155647144	0.8481005006335298	0.3299602879548641	1.0058514410723554	0.4708906041271949	0.2842968317835668	0.8327718818690121	0.6362533061914534	0.0	1.0	8.031125222642682														
(ac)MQLGRS(ph)GRRSQK	ddPTM_K562_Methotrexat_30min_R1	1	MQLGRSGRRSQK	12	3	P0C7T7	P0C7T7	FRMD6-AS1	Putative uncharacterized protein FRMD6-AS1	1	MQLGRS(0.978)GRRS(0.022)QK	40.766999999999996	0.02765	9279600.0	3994.6	4806.6	4907.1	5213.0	4662.3	5107.1	4947.0	3941.5	4488.2	3861.2	True	False	3819.0021669989856	5600.808951769445	3877.1667694892317	4755.984383704635	5275.474170463899	6093.974795352946	6056.490679130154	3802.875210936534	4279.544561632719	3161.899264207008	1.2078190504771746	1.771343260416649	1.226214513972383	1.5041543029352067	1.6684510573068392	1.9273146568384718	1.91545971995066	1.2027186488783603	1.353472771911983	1.0	11.626575689883976	-9.2980342618276	23.831171775584163	1.2085713612524838	1.6061441328465527	0.3748164756047889	0.24656511919754875	412.07704265226414	268348.021325405	0.14078081679251903	0.067633290177832	5.034608888022144e-10	9.2980342618276	0.3975727715940689	
(ac)MRGTS(ph)CVGGGAES(ph)PGGAGLSEGPR	ddPTM_K562_Methotrexat_30min_R1	1	MRGTSCVGGGAESPGGAGLSEGPR	24	1	C9JVW0	C9JVW0	INAFM1	Putative transmembrane protein INAFM1	2	MRGT(0.472)S(0.671)CVGGGAES(0.857)PGGAGLSEGPR	47.472	0.019431	63821000.0	331.63	239.36	234.53	183.2	188.8	225.99	197.09	275.07	324.17	212.32	True	False	317.05194228255	278.9101715756533	185.30535804208384	167.13914043634938	213.6305092730162	269.65936911394164	241.2924495552378	265.3956321888398	309.0994074561026	173.86679057713465	1.823533644522485	1.6041601196515844	1.0657892598522116	0.9613057207851283	1.2287022068095326	1.5509538550681958	1.3878006763355437	1.5264308457519902	1.7777944047283316	1.0	7.441838586795224	-8.264428707165342	24.605530899169267	1.4776981765674555	1.3156515547208787	0.02774844093852824	0.2950948789704995	720.5759859408829	5931124.707585314	0.10830680404651553	0.09966775274234432	5.439654205681588e-09	8.264428707165342	-0.1620466218465768	
(ac)MS(ph)DPDTPPQMT(ph)FGDK	ddPTM_K562_Methotrexat_30min_R1	2	MSDPDTPPQMTFGDK	15	0	A0A5F9ZHX5	A0A5F9ZHX5			2	MS(1)DPDT(0.001)PPQMT(0.999)FGDK;MS(1)DPDT(0.004)PPQMT(0.996)FGDK	58.817	0.01188	16685600.0	6436.6	5149.8	7103.799999999999	6644.4	5908.8	5201.7	5541.4	6494.6	6122.200000000001	6936.9	True	False	6153.654770967228	6000.71691836689	5612.809459170913	6061.895768096503	6685.910769027536	6206.854906500246	6784.200009972067	6266.181236825679	5837.580258283462	5680.560190064642	1.0832830856594098	1.0563600626681513	0.9880732306978764	1.0671299247385533	1.1769808866247493	1.0926483830513933	1.1942836239703443	1.103092129502526	1.0276416520492908	1.0	12.471817493190862	-7.5316306011622105	24.89585981153207	1.1099125046301104	1.0412260221596488	0.1408518879268218	0.05969382541287829	279.88297881820677	796161.3105370878	0.017389476093954047	0.022487293714306803	2.9401493982137466e-08	7.5316306011622105	-0.06868648247046161	
(ac)MS(ph)GEKEEASLR	ddPTM_K562_Methotrexat_30min_R1	1	MSGEKEEASLR	11	1	A0A1W2PR48	A0A1W2PR48			1	MS(0.998)GEKEEAS(0.002)LR	43.442	0.031191000000000003	0.0	1992.7	1914.0	2288.0	1859.6	1496.1	1763.4	1879.4	2019.3	2231.0	2095.0	True	False	1905.1032939916088	2230.255967562668	1807.7800673700065	1696.571755215258	1692.863373534743	2104.152092993162	2300.903291359856	1948.280074449864	2127.2812969570427	1715.5751990349333	1.1104749561915392	1.3000047848775498	1.0537457456758184	0.988922989892623	0.986761393197473	1.226499482026096	1.3411847482140036	1.1356424804612673	1.2399813765981855	1.0	10.744476649786469	-8.295643702056628	24.721821448158714	1.206671989410248	1.0923556956554854	0.1497392104509062	0.11581904114343615	1003.8733321423523	725564.931972048	0.04253459311282882	0.03751446012945966	5.062398140326375e-09	8.295643702056628	-0.1143162937547626	
(ac)MS(ph)PTPPLFSLPEAR	ddPTM_K562_Methotrexat_30min_R1	6	MSPTPPLFSLPEAR	14	0	J3KRD7;J3QQZ3;J3KT14;A0A087WWS1;Q96FV9-2;Q96FV9	J3KRD7	THOC1	THO complex subunit 1	1	MS(0.922)PT(0.078)PPLFSLPEAR;MS(0.997)PT(0.003)PPLFSLPEAR;MS(0.989)PT(0.011)PPLFSLPEAR;MS(0.952)PT(0.048)PPLFSLPEAR;MS(0.871)PT(0.129)PPLFSLPEAR;MS(0.875)PT(0.125)PPLFSLPEAR	124.6	0.00023012	88786800.0	1170.906	865.9739999999999	956.492	1259.1	1051.53	887.5360000000001	889.5699999999999	1110.75	1182.8700000000001	1135.278	True	False	1119.4343742432573	1009.0614844587853	755.7374004365704	1148.716657878861	1189.8246261432976	1059.0397709009749	1089.0787170878937	1071.6842929209063	1127.8786318832704	929.6681531312562	1.2041225360606804	1.0853996461641942	0.8129109272928604	1.2356201016565083	1.279837996101939	1.139158921744255	1.1714703934083572	1.152760035192471	1.2132056240545757	1.0	9.860572025062313														
(ac)MSGNKRGSRAS(ph)CPHR	ddPTM_K562_Methotrexat_30min_R1	1	MSGNKRGSRASCPHR	15	3	A7E2Y1	A7E2Y1	MYH7B	Myosin-7B	1	MSGNKRGSRAS(1)CPHR	58.32	0.0297	0.0	68.178	0.0	54.169	0.0	0.0	0.0	0.0	0.0	0.0	114.91	True	False	65.18097675403219	0.0	42.7996671631844	0.0	0.0	0.0	0.0	0.0	0.0	94.09868549933375	0.6926874313721809	0.0	0.45483809828020855	0.0	0.0	0.0	0.0	0.0	0.0	1.0	6.556102664421001	-12.298841441092641	4.579991911805075	1.0005433737190184	0.11462984374059662	0.5578383100967037	0.23278149381215163	519529512.04080635	348791174.4542348	2675557.276349071	0.055368084401868016	5.025260259630743e-13	12.298841441092641	-0.8859135299784218	
(ac)MTS(ph)ALENY(ph)INRILK	ddPTM_K562_Methotrexat_30min_R1	1	MTSALENYINRILK	14	1	C9JNV3	C9JNV3	LSM8		2	MT(0.029)S(0.987)ALENY(0.984)INRILK	51.927	0.019691999999999998	12669000.0	1013.2	1308.0	1955.2	1383.1	1145.1	1166.9	1009.3	880.03	686.28	610.62	True	False	968.6609411714252	1524.124767801448	1544.8302393889146	1261.8457704012808	1295.7007212316248	1392.3869101245998	1235.6612173935837	849.0788460942473	654.3749925933122	500.03080097122285	1.9372025469030505	3.048061769077226	3.089470161414758	2.5235360860778275	2.59124181693398	2.7846022833396074	2.4711702059023697	1.6980530888198473	1.3086693686114987	1.0	8.965873154741706	-9.446030033088736	1.585656902757267	1.0537118708772264	2.700795116991011	0.8033581168110941	0.3046056986541117	0.1660871077396293	0.7380264546469946	0.2647352631053249	0.09038460682766247	3.5807167425009517e-10	9.446030033088736	1.6470832461137845	
(ac)MVDY(ph)SVWDHIEVSDDEDETHPNIDTASLFR	ddPTM_K562_Methotrexat_30min_R1	1	MVDYSVWDHIEVSDDEDETHPNIDTASLFR	30	0	K7EJ06;K7EQA9;K7EKQ2;Q16543	K7EJ06	CDC37	Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed	1	MVDY(0.81)S(0.136)VWDHIEVS(0.051)DDEDET(0.003)HPNIDTASLFR	52.097	4.7257e-05	68809000.0	68.07600000000001	146.73	0.0	50.965	0.0	0.0	0.0	0.0	0.0	150.91	True	False	65.08346055190081	170.97463851644224	0.0	46.496977578267156	0.0	0.0	0.0	0.0	0.0	123.57873665220137	0.5266558172954218	1.3835279688740578	0.0	0.37625386727433324	0.0	0.0	0.0	0.0	0.0	1.0	6.949286719704549	-3.0333079919374653	13.973881955435353	0.2949748554623818	1.9882929336338573	0.0	0.47585204350889054	0.0	0.0	0.11318655424459328	0.0	0.0009261727694003783	3.0333079919374653	1.6933180781714756	
(ac)MVDYS(ph)VWDHIEVSDDEDETHPNIDTASLFR	ddPTM_K562_Methotrexat_30min_R1	2	MVDYSVWDHIEVSDDEDETHPNIDTASLFR	30	0	K7EJ06;K7EQA9;K7EKQ2;Q16543	K7EJ06	CDC37	Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed	1	MVDY(0.311)S(0.344)VWDHIEVS(0.344)DDEDETHPNIDTASLFR;MVDY(0.395)S(0.47)VWDHIEVS(0.125)DDEDET(0.01)HPNIDTASLFR	56.46	1.499e-05	50003000.0	0.0	0.0	59.512	62.489	0.0	0.0	0.0	0.0	0.0	121.17	True	False	0.0	0.0	47.02124447959959	57.0106863904314	0.0	0.0	0.0	0.0	0.0	99.22493883869353	0.0	0.0	0.47388534606244864	0.5745600557447725	0.0	0.0	0.0	0.0	0.0	1.0	6.632630862849274	-12.312175482863143	4.363412774990803	1.0008734087016717	0.12334651785504686	0.6185519383977175	0.2080797133655785	906053635.6097596	1322919654.9346385	9678140.732502751	0.057770653266768966	4.873315370755055e-13	12.312175482863143	-0.8775268908466249	
(ac)MVDYSVWDHIEVS(ph)DDEDETHPNIDTASLFR	ddPTM_K562_Methotrexat_30min_R1	1	MVDYSVWDHIEVSDDEDETHPNIDTASLFR	30	0	K7EJ06;K7EQA9;K7EKQ2;Q16543	K7EJ06	CDC37	Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed	1	MVDY(0.301)S(0.332)VWDHIEVS(0.367)DDEDET(0.001)HPNIDTASLFR	56.021	1.6828e-05	13792000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	126.29	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	121.84830911814656	0.0	0.0											0.0														
(ac)PEGAQGLSLS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	PEGAQGLSLSK	11	0	E7ESZ3;Q9H7P9-2;Q9H7P9-3;Q9H7P9;M0R391;C9J7S4;C9JVL3	E7ESZ3	PLEKHG2	Pleckstrin homology domain-containing family G member 2	1	PEGAQGLS(0.02)LS(0.98)K	62.54600000000001	0.0032328	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)PNFTDVTEFT(ph)LLGLTCR	ddPTM_K562_Methotrexat_30min_R1	2	PNFTDVTEFTLLGLTCR	17	0	Q8NGP3	Q8NGP3	OR5M9	Olfactory receptor 5M9	1	PNFT(0.001)DVT(0.007)EFT(0.822)LLGLT(0.17)CR;PNFT(0.001)DVT(0.029)EFT(0.923)LLGLT(0.046)CR	66.12	0.027351999999999998	25872000.0	2702.87	3074.3999999999996	4204.299999999999	3561.8999999999996	2937.3	3832.3999999999996	2928.8	2208.61	2413.26	2369.68	True	False	2584.0550711251553	3582.3923441351467	3321.874885158969	3249.633757206511	3323.6064347861775	4572.957060897694	3585.657954525247	2130.931934447934	2301.0680693386603	1940.507989331313	1.3316384603062648	1.8461105874496384	1.711858391422375	1.6746304447457154	1.712750709123064	2.3565772911213347	1.847793451116294	1.0981309771274068	1.1858070577341937	1.0	10.9222186575664	-9.26355093766417	24.73288757835211	1.1064766953695122	1.7979232982943683	0.6305740712951144	0.2412235096570299	110.57872602887025	1295193.4649316943	0.13015236388290471	0.06738361039994	5.450659620761969e-10	9.26355093766417	0.691446602924856	
(ac)RAEEDEDK	ddPTM_K562_Methotrexat_30min_R1	1	RAEEDEDK	8	1	H0YEF4	H0YEF4	ZDHHC5	Palmitoyltransferase	0		57.559	0.033776	0.0	1299.9	928.03	1473.1	1237.3	873.1	864.72	889.65	974.06	895.08	1213.0	False	True	1242.757952456311	1081.3711836871391	1163.9164411026034	1128.8278300321776	987.9279536349072	1031.814901810733	1089.1766591243459	939.8017576975365	853.4679261677762	993.3139457896771	1.251123028850992	1.088649956311101	1.1717508306775042	1.1364260361156695	0.9945777544173227	1.0387601082057174	1.0965079708595642	0.9461276182429929	0.8592126686485567	1.0	9.956105956320265	-7.788520970289168	0.4740586437476374	0.9365428816574731	1.2264318782666395	0.6459153092854278	0.06480205136200386	0.9433204625594221	0.4054530820205044	0.05840962976754999	0.1301867612462144	1.62734273607679e-08	7.788520970289168	0.28988899660916634	
(ac)S(ph)AADEVDGLGVARPHYGSVLDNER	ddPTM_K562_Methotrexat_30min_R1	2	SAADEVDGLGVARPHYGSVLDNER	24	1	H0YLE8;A0A0J9YXZ5;P46940	H0YLE8	IQGAP1	Ras GTPase-activating-like protein IQGAP1	1	S(1)AADEVDGLGVARPHYGSVLDNER;S(1)AADEVDGLGVARPHYGSVLDNER	71.946	0.00011048	32096000.0	150.8	255.63899999999998	186.18	207.3	155.49	231.06	155.67	131.85	60.32	213.726	True	False	144.17101256282157	297.8789996299652	147.1033623002395	189.12633085401316	175.9396604176975	275.70907485936266	190.58296018196694	127.21276076670858	57.515736365956414	175.01815035271608	0.8237489213105731	1.7019891881478937	0.8405034678047986	1.0806098137414017	1.005265225710158	1.5753170417109483	1.088932546698059	0.7268546748456389	0.32862726665802544	1.0	7.4513607350667295	-9.266557035033436	3.9927264593408474	0.6307997702568496	1.1791131875880152	0.33367838565761354	0.3072870360196093	0.2261066481396668	8.549631550249723	0.16467724928811522	0.08050504571041356	5.413061545502325e-10	9.266557035033436	0.5483134173311656	
(ac)S(ph)ASSLLEQRPK	ddPTM_K562_Methotrexat_30min_R1	1	SASSLLEQRPK	11	1	S4R3J8;S4R3V3;Q9Y5A9	S4R3J8	YTHDF2	YTH domain-containing family protein 2	1	S(0.826)AS(0.138)S(0.036)LLEQRPK	81.95	0.0013499	63362000.0	1208.6	1002.9	1402.2	1378.5	842.62	1044.5	996.95	1228.9	1307.7	1450.1	True	False	1155.4713911367787	1168.612178614734	1107.8973821967763	1257.6490452593212	953.4392993836273	1246.3348424244964	1220.5414155162323	1185.678890452849	1246.905312429729	1187.472838243702	0.9730507965518992	0.9841169759664875	0.9329875568652	1.0590971050078175	0.8029146172250851	1.0495691373184186	1.0278478599320549	0.9984892725685361	1.050049544100671	1.0	10.213678798881022														
(ac)S(ph)DAAVDTSSEITTK	ddPTM_K562_Methotrexat_30min_R1	4	SDAAVDTSSEITTK	14	0	B8ZZQ6;P06454-2;P06454	B8ZZQ6	PTMA	Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1	1	S(1)DAAVDTSSEITTK;S(1)DAAVDTSSEITTK;S(1)DAAVDTSSEITTK;S(0.998)DAAVDTS(0.001)S(0.001)EITTK	131.32	2.3528e-18	208866000.0	11233.7	9495.400000000001	13170.4	12346.900000000001	8884.6	8421.8	8926.0	10160.2	10536.3	12407.4	True	False	10739.879998852577	11064.353455796541	10406.113024165179	11264.466446798913	10053.080628638978	10049.193658143246	10927.882717185308	9802.860007143814	10046.469712742484	10160.29962983581	1.0570436296302546	1.0889790516911497	1.0241935182312474	1.1086746313780655	0.9894472599132822	0.9890646953593474	1.0755472884968356	0.9648199722730252	0.9887965984035487	1.0	13.310655327732778	-7.777164988960449	24.9946452744545	1.0026229602626788	1.0678460810455714	0.495135023681174	0.03382058030742626	212.0354201999239	337012.7170013031	0.010387309043974885	0.011816610135339823	1.6704558856880014e-08	7.777164988960449	0.06522312078289261	
(ac)S(ph)DDDSRASTSSSSSSSSNQQTEKETNTPK	ddPTM_K562_Methotrexat_30min_R1	1	SDDDSRASTSSSSSSSSNQQTEKETNTPK	29	2	C9J2P0;P51965-3;P51965	C9J2P0	UBE2E1	Ubiquitin-conjugating enzyme E2 E1	1	S(0.463)DDDS(0.375)RAS(0.097)T(0.026)S(0.01)S(0.01)S(0.01)S(0.003)S(0.003)S(0.001)SSNQQTEKETNTPK	84.646	9.9259e-09	35569000.0	2338.5	1692.7	3857.2	2823.9	1298.9	1827.8	1530.0	2164.0	1670.0	3179.5	True	False	2235.702340040838	1972.3899040195035	3047.626431756815	2576.3330713875916	1469.728117027123	2180.996481554328	1873.141447153656	2087.8908934331243	1592.36206450841	2603.6617400150717	0.8586761888769376	0.7575446048564227	1.170515503192505	0.9895037561110677	0.5644850459793657	0.837665065332835	0.7194258064962052	0.801905586023259	0.61158561422775	1.0	11.346326314693455	-7.730597505056477	24.99997177746351	0.7482097524417535	0.9469129743316975	0.2751290305083527	0.14932901928790174	261.947355350286	212329.66279799747	0.043532196802133154	0.056193665909092826	1.8595270270793994e-08	7.730597505056477	0.19870322188994405	
(ac)S(ph)DEFSLADALPEHSPAK	ddPTM_K562_Methotrexat_30min_R1	1	SDEFSLADALPEHSPAK	17	0	Q8NDC0	Q8NDC0	MAPK1IP1L	MAPK-interacting and spindle-stabilizing protein-like	1	S(0.769)DEFS(0.23)LADALPEHSPAK	43.03	0.0077028999999999995	0.0	848.16	752.36	849.47	703.28	813.88	618.1	566.8	769.11	742.11	925.17	True	False	810.8759019581088	876.6747020665882	671.1778556944057	641.6245343126403	920.9194856309452	737.5390771685795	693.9193282658115	742.059965364302	707.6094680792431	757.6127479194031	1.070303930583243	1.157154106070891	0.8859115128904977	0.8469030333434914	1.2155543688514006	0.9735040483334646	0.9159287910235012	0.979471329385873	0.9339988932637662	1.0	9.565316796195296	-8.504177109841642	24.924569694879047	0.9540786315457105	1.0303253893574038	0.11159409705265921	0.10540629857547282	1872.272813584099	2495274.705863537	0.039460823656495066	0.034187232839007986	3.132008198068658e-09	8.504177109841642	0.07624675781169332	
(ac)S(ph)DFDEFER	ddPTM_K562_Methotrexat_30min_R1	1	SDFDEFER	8	0	P26368-2;P26368	P26368-2	U2AF2	Splicing factor U2AF 65 kDa subunit	1	S(1)DFDEFER	140.98	1.1845999999999998e-11	1165500000.0	184.98	61.573	140.18	108.08	108.72	95.891	0.0	107.1	176.75	0.0	True	False	176.84850068879794	71.74689168794997	110.75813367304526	98.60479420502531	123.01858563645295	114.4205786260674	0.0	103.3332322951421	168.5329310789589	0.0											0.0														
(ac)S(ph)DNDDIEVES(ph)DEEQPR	ddPTM_K562_Methotrexat_30min_R1	2	SDNDDIEVESDEEQPR	16	0	P61244-5;G3V5L1;P61244-6;P61244-3;P61244-4;P61244	P61244-5	MAX	Protein max	2	S(1)DNDDIEVES(1)DEEQPR;S(1)DNDDIEVES(1)DEEQPR	235.26	0.0	38740000.0	611.37	519.63	842.113	718.17	417.14	342.74	475.555	571.01	531.05	540.12	True	False	584.4949068337685	605.4900253002033	665.3649894550522	655.2091511308573	472.0012216003494	408.9696542772349	582.2103143144817	550.9272546484507	506.3616014114917	442.29903413019036	1.3214926141161838	1.3689607676646607	1.5043329017517197	1.4813714265041715	1.0671540862135733	0.9246451443908309	1.3163273473102557	1.245599045297227	1.144839943879336	1.0	8.788878281531739	-7.761184806235802	24.999999784015362	1.129113393685257	1.4215547986053074	0.6194807980796828	0.11592699365557756	5.136376236406706	504369.83520338294	0.03792113824181896	0.0459319368867099	1.7330663654805636e-08	7.761184806235802	0.29244140492005033	
(ac)S(ph)DNDDIEVESDADKR	ddPTM_K562_Methotrexat_30min_R1	3	SDNDDIEVESDADKR	15	1	A0A494C130;Q6V3B1;G3V563;G3V2R5;P61244-2	A0A494C130	MAX	Protein max	1	S(1)DNDDIEVESDADKR;S(1)DNDDIEVESDADKR;S(1)DNDDIEVESDADKR	110.93	9.3135e-05	131324300.0	2850.4500000000003	2215.1099999999997	3603.5200000000004	3066.06	2050.31	2520.06	2098.48	2430.75	2500.95	2940.48	True	False	2725.1476310324592	2581.1192770677876	2847.1903970144954	2797.2632801652453	2319.961702688335	3007.02592915297	2569.117558184969	2345.2591447377854	2384.6813803786263	2407.930578166224	1.1317384544814468	1.0719242907050321	1.1824221274613291	1.1616876771819227	0.9634670217341222	1.2488009232570945	1.0669400444847947	0.9739729068617224	0.9903447391721303	1.0	11.233578083745144	-9.051607356020153	5.375045976148531	0.9906764836117026	1.1237134744073987	0.4363042154774375	0.07035960847371354	0.20230526105855243	13.125966802637636	0.03264704026223504	0.018991270200282254	8.879584490804116e-10	9.051607356020153	0.1330369907956961	
(ac)S(ph)DNGELEDKPPAPPVR	ddPTM_K562_Methotrexat_30min_R1	3	SDNGELEDKPPAPPVR	16	1	Q13177	Q13177	PAK2	Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34	1	S(1)DNGELEDKPPAPPVR;S(1)DNGELEDKPPAPPVR;S(1)DNGELEDKPPAPPVR	108.98	8.5201e-31	87702000.0	6824.7	5815.799999999999	8654.3	7303.200000000001	5809.219999999999	6089.99	5702.18	6694.51	6477.65	7930.120000000001	True	False	6524.6943596650435	6776.762098302492	6837.880698007106	6662.9397949494905	6573.234253596349	7266.794377230026	6981.039017732433	6459.060288815612	6176.5054653669995	6493.89842356607	1.0047422879278827	1.0435583768464751	1.0529700731370757	1.0260308000460827	1.0122169804415746	1.1190187932196707	1.0750151237966015	0.9946352510498113	0.9511244344310552	1.0	12.664869103076725	-9.429145964336477	5.200390557115234	0.9746067642974066	1.047996776753433	0.4649815787161031	0.03267977405369389	0.1984224724211974	8.387690475330482	0.019982252557844662	0.009119438541922766	3.7226656818070803e-10	9.429145964336477	0.0733900124560265	
(ac)S(ph)DQALEALSASLGTR	ddPTM_K562_Methotrexat_30min_R1	1	SDQALEALSASLGTR	15	0	D6RAA8;D6RC54;E7EQ12	D6RAA8	CAST		1	S(1)DQALEALSASLGTR	69.815	0.002907	0.0	312.88	130.31	265.56	191.69	267.03	64.40899999999999	161.0	196.33	261.1	342.74	True	False	299.12616983193385	151.84151260872068	209.82258509212377	174.8848353179247	302.1491254829106	76.85512768379073	197.10834836061335	189.42496261909665	248.9615179899075	280.66646478149545	1.0657709679167038	0.5410034031922282	0.7475869454353049	0.6231055621628189	1.0765416014989175	0.2738308181692601	0.7022867819782681	0.6749112786473006	0.8870369254258043	1.0	8.132712884605905	-9.926394664104988	3.5703016112865815	0.9979248086405248	0.7027457883096173	0.15435285370623297	0.22169798269985364	0.3611556219067015	9.050649401665629	0.20237450977379867	0.0537300607870783	1.1846916730313445e-10	9.926394664104988	-0.2951790203309075	
(ac)S(ph)DQDHSMDEMTAVVK	ddPTM_K562_Methotrexat_30min_R1	2	SDQDHSMDEMTAVVK	15	0	H3BUU5;P08047-3;P08047	H3BUU5	SP1	Transcription factor Sp1	1	S(0.987)DQDHS(0.013)MDEMTAVVK;S(0.5)DQDHS(0.5)MDEMT(0.001)AVVK	65.842	0.005318	16043100.0	4460.200000000001	3161.7	4680.5	4300.5	3257.6000000000004	3034.6000000000004	3252.3999999999996	3774.7999999999997	3611.2	4747.6	True	False	4264.134948492684	3684.1171852888638	3698.1270128170086	3923.48184195699	3686.031498981875	3620.993501983128	3981.833491975521	3642.038144422994	3443.316100211239	3887.763634815397	1.0968092067909778	0.9476186135127006	0.9512221832880555	1.0091873402029208	0.948111008080073	0.9313821111851271	1.0241963930928613	0.9367951569401233	0.8856804126094302	1.0	11.924724794437708	-6.258340922352209	24.280719438190147	0.959483555548269	1.09680928392968	0.5249225824922217	0.03922948065473215	157.06983504016003	1230765.8109335457	0.009705495037068683	0.06601801048067316	5.516442270445624e-07	6.258340922352209	0.13732572838141088	
(ac)S(ph)DQQLDCALDLMR	ddPTM_K562_Methotrexat_30min_R1	2	SDQQLDCALDLMR	13	0	B1AK87;B1AK85;P47756-2;P47756;A0A6I8PIN8	B1AK87	CAPZB	F-actin-capping protein subunit beta	1	S(1)DQQLDCALDLMR;S(1)DQQLDCALDLMR	73.781	0.00023162	8154900.0	120.67	0.0	69.16199999999999	0.0	0.0	58.126999999999995	0.0	61.53	159.752	0.0	True	False	115.36549128617825	0.0	54.64584135465227	0.0	0.0	69.35922009153538	0.0	59.36595502446402	152.32516438883073	0.0											0.0														
(ac)S(ph)DSGEQNYGERES(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SDSGEQNYGERESR	14	1	P62995	P62995	TRA2B	Transformer-2 protein homolog beta	2	S(0.939)DS(0.061)GEQNYGERES(1)R	122.75	3.2137e-08	7347400.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)S(ph)DVEENNFEGR	ddPTM_K562_Methotrexat_30min_R1	1	SDVEENNFEGR	11	0	Q13595;F8WEH2	Q13595	TRA2A	Transformer-2 protein homolog alpha	1	S(1)DVEENNFEGR	120.31	2.1758000000000002e-07	8202000.0	314.47	323.43	443.43	409.59	347.85	160.41	424.23	198.19	278.45	509.7	True	False	300.64627533574594	376.87131012998657	350.36010282949405	373.6818806294997	393.5983720901412	191.40696225305263	519.3743765529381	191.21954536483858	265.50492027686624	417.38839090601704	0.7203033957967513	0.9029271497271862	0.8394102722142656	0.8952857548777424	0.9430026820721216	0.4585823813584493	1.244343129490358	0.4581333585962033	0.6361099782879437	1.0	8.70524666421777														
(ac)S(ph)DVEENNFEGRES(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	SDVEENNFEGRESR	14	1	Q13595	Q13595	TRA2A	Transformer-2 protein homolog alpha	2	S(1)DVEENNFEGRES(1)R;S(1)DVEENNFEGRES(1)R	107.63	2.2138e-08	50663000.0	459.13	333.26	596.48	647.36	408.03	275.48	445.78	528.66	544.87	595.31	True	False	438.9471949467393	388.3255505485554	471.2869993814958	590.6069538912398	461.693096920915	328.7126111930113	545.7575126223245	510.06672815265915	519.5391126279621	487.4935903281556	0.9004163411692502	0.7965757053075397	0.9667552737754964	1.2115173729641728	0.9470752151020632	0.674291144980468	1.119517309458261	1.0463044812739146	1.0657352690078143	1.0	8.929239439893228	-6.896997468578611	6.089441242611901	1.0056399533766178	0.850968787777006	0.1820016798545856	0.13396350410943406	0.36653295707592587	18.58642769884128	0.037297501049489604	0.07943824265944399	1.26765925478525e-07	6.896997468578611	-0.1546711655996118	
(ac)S(ph)DYENDDECWSVLEGFR	ddPTM_K562_Methotrexat_30min_R1	2	SDYENDDECWSVLEGFR	17	0	Q9H257;Q9H257-2;Q9H257-3	Q9H257	CARD9	Caspase recruitment domain-containing protein 9	1	S(0.598)DY(0.402)ENDDECWSVLEGFR;S(0.5)DY(0.5)ENDDECWSVLEGFR	265.72	0.0	5820400.0	130.16	0.0	0.0	0.0	0.0	0.0	0.0	58.99	0.0	223.62	True	False	124.43832224918341	0.0	0.0	0.0	0.0	0.0	0.0	56.915288264149694	0.0	183.1202510778959	0.6795442968033596	0.0	0.0	0.0	0.0	0.0	0.0	0.3108082690425048	0.0	1.0	7.516647535875037	-12.786990899503675	2.7614237559500525	1.233182283200406	0.0965254679956169	0.6119120114740051	0.21237896302398315	92603279.32458454	71421557.64970395	145470279.75712126	0.05142540802482027	1.6330861683129242e-13	12.786990899503675	-1.1366568152047891	
(ac)S(ph)ESGHSQPGLYGIER	ddPTM_K562_Methotrexat_30min_R1	2	SESGHSQPGLYGIER	15	0	M0QZH1;M0QX70;M0QYR7;M0R2N0;M0QZC7;Q9H0W8-2;Q9H0W8	M0QZH1	SMG9	Protein SMG9	1	S(0.876)ES(0.123)GHSQPGLYGIER;S(0.85)ES(0.149)GHSQPGLYGIER	107.09	5.2255999999999996e-06	26543000.0	399.87	474.47	668.97	593.0600000000001	127.04	347.3	293.71	435.88	355.27	339.05	True	False	382.2921935908189	552.868102888955	528.5623390159586	541.0673505850511	143.74798674811427	414.4108097405721	359.581944080719	420.549853340864	338.75357524425283	277.64475953832647	1.3769112524453995	1.991278725405355	1.9037360542834059	1.9487756638545934	0.517740680526949	1.4925936669205033	1.2951151848809945	1.5147048121497524	1.2200971335008786	1.0	8.11709635552458	-7.694348224999545	24.99999391452624	1.2211281821936308	1.8255111829723139	0.49569291061903475	0.30968521031016194	48.13239031192499	17934.71732298236	0.09006846677725636	0.11627786808957581	2.0213977362450958e-08	7.694348224999545	0.604383000778683	
(ac)S(ph)ESSSKSSQPLASKQEK	ddPTM_K562_Methotrexat_30min_R1	1	SESSSKSSQPLASKQEK	17	2	P17096;P17096-2;P17096-3;A0A669KAX1	P17096	HMGA1	High mobility group protein HMG-I/HMG-Y	1	S(0.614)ES(0.137)S(0.115)S(0.115)KS(0.009)S(0.009)QPLASKQEK	53.395	0.03358	48857000.0	2216.0	1221.2	3930.5	2843.3	1499.2	1463.2	1173.2	1373.9	1784.9	3225.7	True	False	2118.58729336348	1422.9825431491802	3105.541763460582	2594.032303508037	1696.371077871324	1745.942691656796	1436.3199645756006	1325.5791582660665	1701.9203885874613	2641.494472327918	0.8020411610009518	0.5387035854347718	1.1756760409661975	0.9820320771755947	0.6422012597953052	0.6609677627370225	0.5437527807165118	0.5018292380138313	0.6443020821798574	1.0	11.367138675527778	-7.782065260985265	22.8707107270429	0.6342851870108809	0.872124047389415	0.20650022566372805	0.19510699824343009	129.41844846029548	143502.3018135007	0.061801137477204886	0.07018983807952553	1.6517135782784467e-08	7.782065260985265	0.23783886037853408	
(ac)S(ph)ETAPAAPAAAPPAEK	ddPTM_K562_Methotrexat_30min_R1	2	SETAPAAPAAAPPAEK	16	0	P16403	P16403	HIST1H1C	Histone H1.2	1	S(0.5)ET(0.5)APAAPAAAPPAEK;S(0.5)ET(0.5)APAAPAAAPPAEK	83.617	5.184299999999999e-10	51073000.0	10282.5	8051.1	11823.8	8956.5	8631.1	8267.9	7836.599999999999	9488.2	9508.2	10334.2	True	False	9830.493611917856	9381.407429698955	9342.145961787366	8171.297550863335	9766.240935308952	9865.554661255625	9594.157035793683	9154.494628037051	9066.165857340631	8462.576239554568	1.1616431372245208	1.108575824209384	1.1039364015560225	0.9655803764189704	1.1540505702815391	1.1657862076495635	1.1337158761359267	1.0817621453439221	1.071324570757171	1.0	13.046881210682878	-10.073526691838646	1.668015097332891	1.0009305441936918	1.1097982794546264	0.28069903925213435	0.054445447159407065	0.6667361637921857	4.073823968586142	0.05519458520061486	0.015887800414194075	8.442543522479788e-11	10.073526691838646	0.10886773526093463	
(ac)S(ph)ETAPAAPAAAPPAEKAPVK	ddPTM_K562_Methotrexat_30min_R1	4	SETAPAAPAAAPPAEKAPVK	20	1	P16403	P16403	HIST1H1C	Histone H1.2	1	S(0.5)ET(0.5)APAAPAAAPPAEKAPVK;S(0.5)ET(0.5)APAAPAAAPPAEKAPVK;S(0.5)ET(0.5)APAAPAAAPPAEKAPVK;S(0.5)ET(0.5)APAAPAAAPPAEKAPVK	93.823	3.8435e-13	249706000.0	13535.9	9952.1	19025.6	15799.1	9474.6	8793.3	9525.0	11451.1	11942.5	16379.1	True	False	12940.878043429017	11596.515368223842	15032.386560207513	14414.017432685187	10720.675970117161	10492.480775386624	11661.223715123246	11048.35832245474	11387.295781671659	13412.686273275927	0.964823733275044	0.8645930525736137	1.1207588289125014	1.0746555267906592	0.7992937247386115	0.7822803397923607	0.8694174662355013	0.8237245021131981	0.8489944183932974	1.0	13.711310586592036	-7.767363181539154	24.999217014696196	0.8423276724808828	1.004274669137867	0.43555025328087305	0.08428044846335159	132.7633424548166	560277.766684894	0.026595987160060064	0.03094710641685618	1.708585901603572e-08	7.767363181539154	0.1619469966569842	
(ac)S(ph)ETAPAAPAAPAPAEKTPVK	ddPTM_K562_Methotrexat_30min_R1	7	SETAPAAPAAPAPAEKTPVK	20	1	P10412	P10412	HIST1H1E	Histone H1.4	1	S(0.334)ET(0.334)APAAPAAPAPAEKT(0.332)PVK;S(0.5)ET(0.5)APAAPAAPAPAEKTPVK;S(0.5)ET(0.5)APAAPAAPAPAEKTPVK;S(0.5)ET(0.5)APAAPAAPAPAEKTPVK;S(0.5)ET(0.5)APAAPAAPAPAEKTPVK;S(0.5)ET(0.5)APAAPAAPAPAEKTPVK;S(0.5)ET(0.5)APAAPAAPAPAEKTPVK	126.34	2.187e-14	581055000.0	19119.79	13717.099999999999	26645.579999999994	23586.5	13696.81	13102.35	13050.7	16143.8	16799.22	23689.23	True	False	18279.306924990135	15983.617624166087	21053.036891395506	21518.70816540367	15498.180591714732	15634.19370286319	15977.651689129549	15576.013403607056	16018.227928940685	19398.88089366793	0.9422866723696808	0.8239453457020485	1.08527069199479	1.1092757506659923	0.7989213747259801	0.8059327642949966	0.8236378055367555	0.8029336067881775	0.8257294849503025	1.0	14.243685806409013	-7.785500490040083	24.999942213453373	0.8301984266878135	0.9851108702281101	0.3766394389832185	0.09190388044810392	242.7999164649888	252272.18822740394	0.029531012318145394	0.03350186940435698	1.6387002122414737e-08	7.785500490040083	0.15491244354029654	
(ac)S(ph)ETAPAETATPAPVEK	ddPTM_K562_Methotrexat_30min_R1	1	SETAPAETATPAPVEK	16	0	P16401	P16401	HIST1H1B	Histone H1.5	1	S(0.938)ET(0.062)APAETATPAPVEK	126.48	0.00086471	11979000.0	3380.0	2663.9	4065.9	2748.2	2816.0	2409.4	2904.8	3632.1	3169.8	3516.9	True	False	3231.419247097726	3104.0641964421075	3212.5231538110615	2507.2695728557605	3186.3533586483754	2874.9824502992637	3556.275343589503	3504.3569843061236	3022.4366898675185	2879.9553305422232	1.122037974974192	1.0778167853935743	1.1154767297054653	0.8705932158967565	1.1063898543344646	0.9982732786893527	1.2348369802388377	1.2168094925438795	1.0494734615548602	1.0	11.491830719626552	-8.744958475825396	24.999725463872252	1.1433474786669728	1.0473654639109746	0.12334012450715415	0.09560994788252279	410.2429433210621	622293.8641152193	0.03624965260589326	0.027999924947026897	1.7990429186982082e-09	8.744958475825396	-0.09598201475599821	
(ac)S(ph)ETAPAETATPAPVEKSPAK	ddPTM_K562_Methotrexat_30min_R1	4	SETAPAETATPAPVEKSPAK	20	1	P16401	P16401	HIST1H1B	Histone H1.5	1	S(0.946)ET(0.053)APAET(0.001)ATPAPVEKS(0.001)PAK;S(0.941)ET(0.056)APAET(0.001)AT(0.001)PAPVEKSPAK;S(0.839)ET(0.122)APAET(0.029)AT(0.003)PAPVEKS(0.007)PAK;S(0.679)ET(0.309)APAET(0.012)ATPAPVEKSPAK	101.53	7.0835e-10	1764651000.0	15461.0	10286.5	24822.5	14944.899999999998	10600.6	9099.5	9535.0	12443.199999999999	12799.4	17671.7	True	False	14781.352952478685	11986.169284395706	19612.59646953322	13634.703820454133	11994.764706565333	10857.84959180633	11673.466469679806	12005.565603127101	12204.358687705953	14471.183887725836	1.0214335652949533	0.8282784171212233	1.3552862448364176	0.9421968462455108	0.8288723852606869	0.7503083145129361	0.8066697624913054	0.8296187579587029	0.8433559259831839	1.0	13.820895333145682	-7.520214173475041	15.009842651786505	0.8333605667805545	1.0617274269839942	0.3627990476990448	0.1333460364583682	0.666894268638574	3738.849925901125	0.038559851532701396	0.05157596698359827	3.01846279037045e-08	7.520214173475041	0.22836686020343977	
(ac)S(ph)ETAPAETATPAPVEKSPAKK	ddPTM_K562_Methotrexat_30min_R1	1	SETAPAETATPAPVEKSPAKK	21	2	P16401	P16401	HIST1H1B	Histone H1.5	1	S(0.491)ET(0.055)APAET(0.073)AT(0.295)PAPVEKS(0.086)PAKK	46.153999999999996	0.0028133000000000003	22509000.0	2231.8	1567.2	4316.6	2249.5	1353.7	1063.6	1270.2	1738.6	1730.0	3529.7	True	False	2133.692744281865	1826.1531621547613	3410.604649829271	2052.2898275740595	1531.7352775576373	1269.1256471064564	1555.0746837742302	1677.452452552138	1649.5726776045199	2890.437126507686	0.7381903327749798	0.6317913458166706	1.1799615423394685	0.7100274933340959	0.529932051975933	0.4390774099417456	0.5380067497448452	0.5803455945014404	0.5707000724826641	1.0	11.497071975504301	-7.521647011734025	21.389379011331556	0.5805258633594861	0.847634140788169	0.23063226559751582	0.1922076910028996	9.049886411889966	157164.05043994813	0.0549983776853863	0.07233310712819264	3.008520591123309e-08	7.521647011734025	0.2671082774286829	
(ac)S(ph)ETAPLAPTIPAPAEK	ddPTM_K562_Methotrexat_30min_R1	1	SETAPLAPTIPAPAEK	16	0	P16402	P16402	HIST1H1D	Histone H1.3	1	S(0.5)ET(0.5)APLAPT(0.001)IPAPAEK	59.306000000000004	0.0031689	7343200.0	5131.1	4032.8	6015.5	5115.7	4037.9	4043.7	3704.7	4332.0	4850.8	5886.4	True	False	4905.542987805661	4699.151654120552	4752.928756671451	4667.214523636641	4568.95462602496	4825.08779541593	4535.573280568721	4179.6411045990235	4625.287366776883	4820.31591961777	1.017680805492651	0.9748638330935733	0.9860201770858905	0.9682383066723832	0.9478537718721262	1.000989950840927	0.9409286354261137	0.8670886253717682	0.9595402965089573	1.0	12.234911987285367	-7.238576870603411	0.5883135900519653	0.9395872706380399	1.0130364241968455	0.20348483809815432	0.03605165955498093	2.1736061408482	1.1973303470885988	0.023505775056090323	0.09529823308967894	5.7732867585590873e-08	7.238576870603411	0.07344915355880555	
(ac)S(ph)FLFGSR	ddPTM_K562_Methotrexat_30min_R1	1	SFLFGSR	7	0	Q7L9L4	Q7L9L4	MOB1B	MOB kinase activator 1B	1	S(1)FLFGSR	70.268	0.0036463	4600100.0	0.0	58.611000000000004	0.0	0.0	0.0	0.0	0.0	53.99	0.0	0.0	True	False	0.0	68.29547153334148	0.0	0.0	0.0	0.0	0.0	52.0911410981767	0.0	0.0											0.0														
(ac)S(ph)GDEMIFDPTMSK	ddPTM_K562_Methotrexat_30min_R1	11	SGDEMIFDPTMSK	13	0	P20042	P20042	EIF2S2	Eukaryotic translation initiation factor 2 subunit 2	1	S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK	100.22	9.596700000000001e-05	1317200000.0	61718.700000000004	51803.299999999996	78138.0	66487.9	51768.700000000004	49941.7	49677.200000000004	58858.399999999994	58886.700000000004	68269.4	True	False	59005.61984788473	60362.914819456244	61737.90161895	60659.00903612411	58577.191448103804	59592.2267112604	60818.57666571343	56788.316710741325	56149.070170112165	55905.15011598834	1.0554594652811724	1.0797379972009595	1.1043329906253763	1.085034364638549	1.0477959781267323	1.0659523601604208	1.0878886209862781	1.015797589183119	1.004363105252696	1.0	15.770693573253855	-9.341589844542067	4.756025256926979	1.0050368272430308	1.075417460128182	0.8030318032607131	0.015581559064875664	0.10486306922076422	4.259579679753755	0.009772760602056467	0.004513262283994729	4.554179619640368e-10	9.341589844542067	0.07038063288515128	
(ac)S(ph)GDEMIFDPTMSKK	ddPTM_K562_Methotrexat_30min_R1	2	SGDEMIFDPTMSKK	14	1	P20042	P20042	EIF2S2	Eukaryotic translation initiation factor 2 subunit 2	1	S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK	112.13	9.245700000000001e-10	113065000.0	10026.6	6984.0	14778.6	10517.9	7234.200000000001	6543.6	6789.299999999999	9612.8	8530.0	12635.0	True	False	9585.84266951185	8137.987292297642	11676.77382151853	9595.812037093228	8185.62410054478	7808.058089888881	8311.973351085171	9274.712375413086	8133.442161830377	10346.679064346727	0.9264656427339457	0.7865313345167977	1.1285528186290357	0.927429175817303	0.7911354019620989	0.7546438853790687	0.8033469772660795	0.896395096217153	0.7860920505263502	1.0	13.336880165031893	-5.903126983313675	18.22166470858111	0.8716729177878152	4.117575425854203	0.01797482609946055	0.11207085436992294	1057.9253709370853	200999.08020226954	0.02815295891946273	1426.4761469025277	1.2498935205617623e-06	5.903126983313675	3.2459025080663877	
(ac)S(ph)GEDEQQEQTIAEDLVVTK	ddPTM_K562_Methotrexat_30min_R1	19	SGEDEQQEQTIAEDLVVTK	19	0	Q9UQ80;F8VR77	Q9UQ80	PA2G4	Proliferation-associated protein 2G4	1	S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(0.998)GEDEQQEQT(0.002)IAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK	190.1	5.023099999999999e-177	1079334980.0	84137.48999999999	70614.83	105012.934	90316.74	70363.40999999999	67374.71600000001	66867.147	81743.25200000002	83057.15000000001	96957.03999999998	True	False	80438.90668298582	82282.73041061837	82972.15424005335	82398.81162998494	79617.43173986263	80393.92632767367	81863.80686184051	78868.29549464388	79195.84122526032	79397.18052307294	1.0131204427291993	1.0363432286705305	1.045026456776277	1.0378052606797508	1.002774043301521	1.0125539193965594	1.0310669260862577	0.9933387429510125	0.9974641505342358	1.0	16.276800156217394	-8.65926211758176	0.681483924898042	0.9964296231055177	1.0329819816470207	0.46913847745708637	0.013151335123309793	0.6780976956643586	0.6404403252621186	0.011866593161504154	0.008549031553934399	2.1914818715440172e-09	8.65926211758176	0.03655235854150296	
(ac)S(ph)GGGDVVCTGWLR	ddPTM_K562_Methotrexat_30min_R1	2	SGGGDVVCTGWLR	13	0	Q9UQC2	Q9UQC2	GAB2	GRB2-associated-binding protein 2	1	S(1)GGGDVVCTGWLR;S(1)GGGDVVCTGWLR	89.82700000000001	0.00090502	1758400.0	0.0	191.54	301.22	189.7	0.0	277.96000000000004	59.415	115.36	294.13	132.22	True	False	0.0	223.18872937667373	237.9980384148573	173.0692955282503	0.0	331.6718360941247	72.74032619780029	111.30272341332956	280.4559604993165	108.27367676200429	0.0	2.061338785670533	2.1981154194846395	1.5984429521930144	0.0	3.0632730504125263	0.6718191195971885	1.027975836250425	2.5902506397356864	1.0	6.758538730773513	-8.24270617555671	24.950941680451002	1.6099847981755058	1.3017552173216334	0.05174470582180746	0.9757830240791028	4402.278228859843	5863443.222859501	0.3217454787083467	0.32121217105563366	5.718654046687211e-09	8.24270617555671	-0.3082295808538724	
(ac)S(ph)GHSPTRGAMQVAMNGK	ddPTM_K562_Methotrexat_30min_R1	2	SGHSPTRGAMQVAMNGK	17	1	E3W974;E7EPX3;B9ZVU2;Q9ULA0	E3W974	DNPEP	Aspartyl aminopeptidase	1	S(0.472)GHS(0.472)PT(0.056)RGAMQVAMNGK;S(0.385)GHS(0.307)PT(0.307)RGAMQVAMNGK	77.64	0.00015605	0.0	3075.0	2860.8	3716.0	4157.6	2789.8	2644.7	3307.1000000000004	3211.1000000000004	2679.0	4040.8	True	False	2939.8266819010382	3333.498574714357	2936.0623821446447	3793.1096630904285	3156.7075994166335	3155.750845150853	4048.8013593999053	3098.163792931193	2554.453874741334	3308.9719638474276	0.888441097120335	1.0074121543291685	0.8873034931159733	1.14631060780584	0.9539843896852628	0.9536952502557863	1.223582854020999	0.9362919440782681	0.7719780955083113	1.0	11.692167352743596	-9.519477888188243	24.996064169177522	0.8753710089971226	1.0103846505649008	0.16493838595981636	0.1125053485755838	231.3755096393842	1700668.3671322507	0.07074774372252889	0.027949538075190645	3.0235845103663215e-10	9.519477888188243	0.13501364156777818	
(ac)S(ph)HPSPQAKPSNPSNPR	ddPTM_K562_Methotrexat_30min_R1	1	SHPSPQAKPSNPSNPR	16	1	Q08752	Q08752	PPID	Peptidyl-prolyl cis-trans isomerase D	1	S(0.887)HPS(0.113)PQAKPSNPSNPR	69.86399999999999	0.021730000000000003	0.0	386.06	501.75	443.62	302.65	314.51	179.05	240.25	373.27	266.22	390.41	True	False	369.0892646551915	584.6556592082387	350.5102244259976	276.1171443944383	355.87357770898456	213.6488784452907	294.13217822135033	360.14188252855007	253.8434903074422	319.702965849751	1.1544755728936538	1.828746435474127	1.096362129435874	0.863667760042625	1.1131381805079419	0.6682730573907095	0.9200170459462736	1.1264890257471176	0.7939979212665158	1.0	8.320588317680711	-6.94965750523285	7.464185073227728	0.9322141414930436	1.4896965775308952	0.5568928182128585	0.1990644725144111	0.14591121582204847	17.969371422834847	0.048855834786377325	0.102269230117695	1.1229036532472458e-07	6.94965750523285	0.5574824360378516	
(ac)S(ph)LDIQSLDIQCEELSDAR	ddPTM_K562_Methotrexat_30min_R1	1	SLDIQSLDIQCEELSDAR	18	0	E9PR82;E9PMI1;E9PMA9;E9PMN0;E9PIK5;E9PMJ3;E9PLZ3;E9PIM9;P13489	E9PR82	RNH1	Ribonuclease inhibitor	1	S(0.999)LDIQS(0.001)LDIQCEELSDAR	103.83	0.0020054	3053000.0	186.78	0.0	154.81	94.728	122.72	0.0	0.0	0.0	0.0	117.97	True	False	178.5693748440572	0.0	122.31749660382465	86.42334331470799	138.85983102746056	0.0	0.0	0.0	0.0	96.60448984732749	1.8484583390095635	0.0	1.2661678230187197	0.8946100067532095	1.4374055620697639	0.0	0.0	0.0	0.0	1.0	6.5940183370534395	-8.27282299213271	24.899830299197387	0.12499995240085936	1.0278168378154395	0.4080350190923122	0.5291789290383686	679.6031917670135	1486518.620379245	0.17523959499369113	0.15588186683989383	5.335523141227489e-09	8.27282299213271	0.9028168854145802	
(ac)S(ph)LPES(ph)PHSPATLDYALEDPHQGQR	ddPTM_K562_Methotrexat_30min_R1	1	SLPESPHSPATLDYALEDPHQGQR	24	0	Q8N831	Q8N831	TSPYL6	Testis-specific Y-encoded-like protein 6	2	S(0.598)LPES(0.598)PHS(0.598)PAT(0.202)LDY(0.003)ALEDPHQGQR	70.501	1.4868e-06	11213000.0	235.63	211.19	260.42	187.23	150.06	225.54	213.39	137.2	128.2	207.5	True	False	225.27198733539552	246.0855578837827	205.76140084986758	170.81583659332796	169.79552024104242	269.12241298269134	261.24813948243036	132.37459823429967	122.2400099820228	169.9197392838896	1.3257552553033722	1.448245853724156	1.2109328893572295	1.0052736504494113	0.9992689546054467	1.5838207739541141	1.5374796394076138	0.7790419099757313	0.7193985260169982	1.0	7.408709647434042	-9.278164254836696	24.799437254811373	0.8119150755038447	1.2915335827483563	0.5404995468443239	0.19761753708832983	642.7222849146177	953014.5540256619	0.11861646091196185	0.05722709261976494	5.270304951312252e-10	9.278164254836696	0.4796185072445116	
(ac)S(ph)LSHLYR	ddPTM_K562_Methotrexat_30min_R1	1	SLSHLYR	7	0	Q9UBB9;F6UKU9;F6SQZ1;F6XM96;F6UQ07	Q9UBB9	TFIP11	Tuftelin-interacting protein 11	1	S(1)LSHLYR	102.98	4.2147e-05	0.0	51.591	1391.2	138.3	112.01	0.0	0.0	213.78	123.83	164.42	145.71	True	False	49.32312141331915	1621.0721536432525	109.27271998132518	102.19025720674394	0.0	0.0	261.72560691013604	119.47482871248786	156.77615008770817	119.32050704123161	0.4133666763272752	13.585863770115271	0.9157916161348998	0.8564349895984916	0.0	0.0	2.1934671030160464	1.0012933373741273	1.3139078434651106	1.0	6.898698203169909	-6.910480146833821	24.99999999909555	0.8865365979299258	7.062690582437187	0.3965893947498377	3.0042452099671024	16.644204896989045	4644.030734891966	0.7106477212436116	1.4793331718623846	1.2289093631710634e-07	6.910480146833821	6.176153984507262	
(ac)S(ph)NGYEDHMAEDCRGDIGR	ddPTM_K562_Methotrexat_30min_R1	1	SNGYEDHMAEDCRGDIGR	18	1	Q15717;M0QZR9	Q15717	ELAVL1	ELAV-like protein 1	1	S(0.668)NGY(0.332)EDHMAEDCRGDIGR	58.824	0.021189	15463000.0	725.96	730.59	979.63	888.01	770.18	707.35	698.73	1013.3	964.05	1136.8	True	False	694.0476676399599	851.3075795933173	774.0190504360488	810.1595420244685	871.4721696604429	844.0353765332388	855.4379891305052	977.6616646560924	919.2315259217557	930.9145041827749	0.7455546825422447	0.9144852462478901	0.831460941856889	0.8702835098005977	0.9361463010241582	0.9066733547934083	0.9189221838169462	1.0502163842794088	0.9874499986749317	1.0	9.862504865555174	-7.738459064901954	0.38275208581594977	1.0252630102297988	0.7660451413153313	0.6986781055380542	0.0455865236954439	1.195701449340351	0.3000691174305615	0.04650855339484221	0.12859482391012017	1.8261688693341345e-08	7.738459064901954	-0.2592178689144675	
(ac)S(ph)QERPTFYR	ddPTM_K562_Methotrexat_30min_R1	3	SQERPTFYR	9	1	Q16539-5;Q16539-3;Q16539-4;Q16539-2;Q16539;B5TY33	Q16539-5	MAPK14	Mitogen-activated protein kinase 14	1	S(0.997)QERPT(0.003)FYR;S(0.996)QERPT(0.004)FYR;S(0.993)QERPT(0.007)FYR	69.825	0.0053233	64393400.0	605.94	758.24	772.64	821.34	680.64	588.31	893.86	562.29	683.03	919.45	True	False	579.3036031320697	883.5262721236775	610.4734227503333	749.3343974126154	770.15609020967	701.9925812798043	1094.330858792657	542.5139419909937	651.2760843839391	752.9286953473368	0.7694003518684179	1.1734527818946974	0.8107984547842384	0.9952262439233197	1.0228805130801741	0.9323493520936469	1.4534322646420408	0.720538273203579	0.86499038807851	1.0	9.55636943350363	-6.220256609305594	22.412363301061223	0.9955071592786207	0.769397961553152	0.11115339299181848	0.19310058390303864	15308.441535697826	8330450.288216942	0.04732772848415874	13.126895413679476	6.022036600105101e-07	6.220256609305594	-0.22610919772546867	
(ac)S(ph)SENCFVAENSSLHPESGQENDATSPHFSTR	ddPTM_K562_Methotrexat_30min_R1	1	SSENCFVAENSSLHPESGQENDATSPHFSTR	31	0	B4E009;Q07108	B4E009	CD69	Early activation antigen CD69	1	S(0.499)S(0.499)ENCFVAENS(0.001)S(0.001)LHPESGQENDATSPHFSTR	61.89	8.0027e-10	7490200.0	0.0	205.81	170.42	158.13	52.103	119.39	102.63	61.18	182.65	187.19	True	False	0.0	239.81660432814678	134.65117092709642	144.2669884126633	58.955457757690496	142.46042779996236	125.64739001397362	59.02826472284588	174.15864136674304	153.28807709181345	0.0	1.5644830888217496	0.8784190752581867	0.9411494432554798	0.3846056319329945	0.9293640477637034	0.8196814285739643	0.38508060015320245	1.1361525610529315	1.0	7.260101676794527	-6.217824954383568	23.24999218661176	0.857972076843518	2.7461319219794147e-08	0.40045113246172703	0.32531767581971643	14284.187354779091	7614207.039934094	0.08007894759347758	33.90581321507394	6.055849110663643e-07	6.217824954383568	-0.8579720493821987	
(ac)S(ph)SSPVNVK	ddPTM_K562_Methotrexat_30min_R1	1	SSSPVNVK	8	0	A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1	A0A1W2PPS1	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	1	S(0.739)S(0.113)S(0.147)PVNVK	77.058	0.0012387000000000001	30779000.0	8755.3	7177.4	10764.0	9112.4	7372.3	6951.0	6253.0	8278.5	8110.7	9837.1	True	False	8370.427495300213	8363.34335505972	8504.78349876344	8313.5300399137	8341.886671151788	8294.182374047556	7655.394424216868	7987.3404627015325	7733.635327310389	8055.505866552052	1.0390939605736957	1.0382145446365902	1.0557727397452308	1.0320307846131689	1.0355509398595117	1.0296289905872371	0.9503306869905563	0.9915380356020154	0.960043410733753	1.0	12.97575947424574	-8.657705782896334	6.029925630748082	0.9750280183941302	1.039598896344796	0.8200263363081416	0.014482688773751891	0.07958583758799806	4.00381124732028	0.005288425755120534	0.0040573451617913845	2.1993493392217668e-09	8.657705782896334	0.06457087795066574	
(ac)S(ph)SSSSSPRETYEEDREYESQAKR	ddPTM_K562_Methotrexat_30min_R1	1	SSSSSSPRETYEEDREYESQAKR	23	3	B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9	B7WPG3	HNRNPLL	Heterogeneous nuclear ribonucleoprotein L-like	1	S(0.22)S(0.22)S(0.22)S(0.22)S(0.057)S(0.057)PRET(0.002)Y(0.002)EEDREYESQAKR	47.018	0.030132	9386900.0	895.57	622.6	1129.9	1099.0	820.32	746.63	1010.4	853.25	1169.5	1092.7	True	False	856.2018151252392	725.4740676094657	892.7494309971023	1002.6523763075763	928.2064585108087	890.9056806121604	1237.0079203948055	823.2407138732956	1115.1302002650211	894.8014415205116	0.9568623555973702	0.8107654211829246	0.9977067420455622	1.1205305778271843	1.0373323236197887	0.99564622861835	1.3824384528178584	0.9200261372784393	1.2462320113947412	1.0	9.805423770347906	-7.009335736760057	4.003734481534503	1.1005584615293837	0.884315855621207	0.30628719848331487	0.13037972188575808	0.2362194647784018	8.711851185425461	0.03373800431040706	0.06884125421099752	9.787330710808557e-08	7.009335736760057	-0.2162426059081768	
(ac)SAADEVDGLGVARPHYGSVLDNER	ddPTM_K562_Methotrexat_30min_R1	1	SAADEVDGLGVARPHYGSVLDNER	24	1	H0YLE8;A0A0J9YXZ5;P46940	H0YLE8	IQGAP1	Ras GTPase-activating-like protein IQGAP1	0		56.528999999999996	0.00025895	0.0	0.0	55.895	60.346000000000004	0.0	106.92	0.0	53.16	0.0	0.0	0.0	False	True	0.0	65.13069869744795	47.68019927688394	0.0	120.98185408618056	0.0	65.08248322267208	0.0	0.0	0.0											0.0														
(ac)SAQRLIS(ph)NR	ddPTM_K562_Methotrexat_30min_R1	1	SAQRLISNR	9	1	Q96G30	Q96G30	MRAP2	Melanocortin-2 receptor accessory protein 2	1	SAQRLIS(1)NR	57.347	0.01591	3271100.0	115.23	0.0	148.1	178.66	110.21	129.39	97.766	140.29	198.55	56.244	True	False	110.16462717250619	0.0	117.01583390624916	162.9971551875446	124.70454675306736	154.39278627219304	119.69251419766293	135.355921182871	189.31945383721236	46.05766658449682	2.3918846815741204	0.0	2.540637478704514	3.5389798762061044	2.7075741347922166	3.3521625762118443	2.598753325422523	2.938835838210533	4.110487305949146	1.0	5.525369416737849	-6.944791476598624	8.853484882430184	2.9776801751960886	1.203927986016434	0.33642012492963447	0.9343076278310718	0.28407761269874676	41.847149382322876	0.2239130084880581	0.4676047300603763	1.1355559138811694e-07	6.944791476598624	-1.7737521891796546	
(ac)SCINLPTVLPGS(ph)PSK	ddPTM_K562_Methotrexat_30min_R1	1	SCINLPTVLPGSPSK	15	0	K7ERV3;P04183;K7ENW5;K7ES52;K7ERJ1	K7ERV3	TK1	Thymidine kinase;Thymidine kinase, cytosolic	1	SCINLPTVLPGS(0.919)PS(0.08)K	169.92	9.6964e-19	12213000.0	5689.5	5127.7	7777.5	5813.2	5593.8	4579.2	4249.9	6435.0	5350.1	6487.9	True	False	5439.396392414946	5974.965269002663	6145.109035826146	5303.565781575254	6329.48274772986	5464.065591603882	5203.048258992363	6208.677402607281	5101.375018758349	5312.878440963601	1.0238134474291487	1.1246192314385004	1.1566440121132535	0.9982471536866825	1.1913471798880226	1.0284567306254537	0.9793275560147546	1.168608969995784	0.9601904269869026	1.0	12.375277988885598														
(ac)SCINLPTVLPGS(ph)PSKTR	ddPTM_K562_Methotrexat_30min_R1	4	SCINLPTVLPGSPSKTR	17	1	K7ERV3;P04183;K7ENW5;K7ES52;K7ERJ1	K7ERV3	TK1	Thymidine kinase;Thymidine kinase, cytosolic	1	S(0.001)CINLPT(0.068)VLPGS(0.542)PS(0.306)KT(0.083)R;SCINLPT(0.112)VLPGS(0.546)PS(0.26)KT(0.082)R;SCINLPT(0.013)VLPGS(0.427)PS(0.427)KT(0.133)R;SCINLPT(0.195)VLPGS(0.48)PS(0.246)KT(0.08)R	130.47	4.1053999999999995e-09	647027000.0	10490.3	8797.5	12778.599999999999	12058.5	8315.6	8369.599999999999	8319.599999999999	10298.0	9425.300000000001	13082.9	True	False	10029.158972730556	10251.137343068222	10096.546489901382	11001.35002702903	9409.247155247316	9986.90674691821	10185.482080875518	9935.81350303804	8987.11986024617	10713.460034106984	0.9361269786606837	0.9568465566150498	0.942416964991551	1.0268718035075064	0.8782640832459707	0.9321831336584311	0.950718259875837	0.9274140633751136	0.8388624992892213	1.0	13.38713686971096	-7.780934777711939	24.99988143643815	0.9196320956858661	0.9632893633446501	0.1812526871504243	0.04597410141249161	427.8909132873797	548701.9889063837	0.01392378098963978	0.015810807216093063	1.656018645457493e-08	7.780934777711939	0.04365726765878397	
(ac)SDAAVDTS(ph)SEITTK	ddPTM_K562_Methotrexat_30min_R1	1	SDAAVDTSSEITTK	14	0	B8ZZQ6;P06454-2;P06454	B8ZZQ6	PTMA	Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1	1	SDAAVDT(0.037)S(0.479)S(0.479)EIT(0.004)T(0.001)K	64.313	0.031705000000000004	10203000.0	1945.1	1699.2	2425.3	2498.2	1668.1	1463.8	1696.8	2082.3	2200.4	2642.8	True	False	1859.5957329969788	1979.963918538394	1916.2626736855248	2279.1866847057204	1887.4843883385502	1746.6586331651292	2077.3505931570717	2009.0643287411247	2098.1038842780254	2164.1633107444013	0.8592677473851725	0.9148865562540893	0.8854519731352405	1.0531491192879316	0.8721543235520971	0.8070826376611735	0.9598862446487604	0.9283330508223394	0.9694757663904515	1.0	11.079593655689667	-9.74587942022036	1.4290290477117775	0.9981678039502586	0.9069375089649059	0.21054662963883541	0.06151792656288514	0.6785142624066247	2.759097567491544	0.05988595327053985	0.018598705103480054	1.7952319951964772e-10	9.74587942022036	-0.09123029498535273	
(ac)SDDDS(ph)RASTSSSSSSSSNQQTEKETNTPK	ddPTM_K562_Methotrexat_30min_R1	2	SDDDSRASTSSSSSSSSNQQTEKETNTPK	29	2	C9J2P0;P51965-3;P51965	C9J2P0	UBE2E1	Ubiquitin-conjugating enzyme E2 E1	1	S(0.213)DDDS(0.472)RAS(0.107)T(0.026)S(0.013)S(0.013)S(0.036)S(0.036)S(0.036)S(0.036)S(0.007)S(0.007)NQQTEKETNTPK;S(0.118)DDDS(0.308)RAS(0.104)T(0.104)S(0.104)S(0.061)S(0.031)S(0.031)S(0.031)S(0.031)S(0.031)S(0.031)NQQT(0.015)EKETNTPK	63.138000000000005	6.6915e-05	45138000.0	4441.3	3362.0	6557.2	5117.200000000001	2922.3	2834.5	2689.6000000000004	3536.6000000000004	3567.8999999999996	5971.5	True	False	4246.065769862465	3917.5133557709996	5180.933329439955	4668.583020965538	3306.633671867244	3382.227008953791	3292.8112655323357	3412.21577343604	3402.02910776021	4890.00348498191	0.8683154895293846	0.8011269046744844	1.0594948133169113	0.9547197737800402	0.676202722967891	0.6916614720912214	0.6733760570202368	0.6977941393938828	0.6957109781636066	1.0	12.25561977801226	-7.759787440227689	24.99991699643083	0.7183533774356132	0.9222566426860295	0.38559545087070357	0.11056334833134611	40.85234894903381	618237.4095422375	0.03248468736938831	0.039753505715153806	1.7386515808872475e-08	7.759787440227689	0.20390326525041624	
(ac)SDEFSLADALPEHS(ph)PAK	ddPTM_K562_Methotrexat_30min_R1	3	SDEFSLADALPEHSPAK	17	0	Q8NDC0	Q8NDC0	MAPK1IP1L	MAPK-interacting and spindle-stabilizing protein-like	1	S(0.001)DEFSLADALPEHS(0.999)PAK;SDEFSLADALPEHS(0.999)PAK;S(0.144)DEFS(0.106)LADALPEHS(0.75)PAK	101.92	1.3281999999999996e-110	204363600.0	7940.700000000001	5948.6	8486.7	7782.700000000001	6269.9	5475.4	5804.7	9007.7	9006.3	11795.7	True	False	7591.636335925717	6931.505041088445	6705.457647617586	7100.4027744212635	7094.501748362738	6533.4435578851935	7106.551737446285	8690.894085387039	8587.59907879167	9659.384427330013	0.7859337614150791	0.7175928335015452	0.6941909909543861	0.735078185141029	0.7344672739486109	0.6763830145738519	0.7357147643217503	0.8997358114040112	0.8890420650920715	1.0	13.237715536669764	-9.333350730990071	2.5923089715998895	0.9394009042397184	0.7209043026430282	0.8668690179819187	0.03689431540430247	0.10107689217808269	1.2992633113414038	0.025189750279453086	0.010300596676696343	4.6414028972143867e-10	9.333350730990071	-0.21849660159669027	
(ac)SDQALEALSAS(ph)LGTR	ddPTM_K562_Methotrexat_30min_R1	1	SDQALEALSASLGTR	15	0	D6RAA8;D6RC54;E7EQ12	D6RAA8	CAST		1	SDQALEALS(0.33)AS(0.536)LGT(0.134)R	82.34899999999999	0.00022569	1019800.0	677.92	697.99	667.23	564.95	879.62	642.3	768.7	780.9	769.97	678.35	True	False	648.1194485184878	813.3209836985717	527.187541237452	515.4217106414602	995.3054479170046	766.4153846713783	941.1005427627551	753.4353043816669	734.1742627602039	555.4942416541039	1.1667437750363936	1.4641393604310515	0.9490423153040028	0.927861482608138	1.7917475525097577	1.3796999630260995	1.694167953857497	1.3563332396356635	1.3216595379531597	1.0	9.11762814624935	-7.746410181706855	24.99720770107048	1.4530513709749446	1.138324526354144	0.25655015359751143	0.24437519155091408	323.56080437518676	538158.0973577515	0.07164229127512665	0.09211620328528614	1.7930393401315405e-08	7.746410181706855	-0.3147268446208007	
(ac)SDQDHS(ph)MDEMTAVVK	ddPTM_K562_Methotrexat_30min_R1	1	SDQDHSMDEMTAVVK	15	0	H3BUU5;P08047-3;P08047	H3BUU5	SP1	Transcription factor Sp1	1	S(0.443)DQDHS(0.556)MDEMT(0.001)AVVK	54.023	0.0027887	44442000.0	1707.9	1341.9	2384.8	2181.7	1449.5	1452.0	1315.5	2087.9	1859.0	1927.5	True	False	1632.8227609817166	1563.6261665999723	1884.2630702202775	1990.4337483077686	1640.1346567332473	1732.5784501678977	1610.5343619154473	2014.467373567015	1772.5754957611573	1578.4110721431193	1.0344724449789362	0.9906330449626962	1.193772080971202	1.2610363570278413	1.0391048857166982	1.0976725143060828	1.0203516627190863	1.276262824760746	1.1230125833788072	1.0	10.624257266002152	-6.7498773984627745	24.99640479158834	1.1331452507065993	1.0125526933820148	0.19876825916410712	0.09062559296375512	334.87572036002723	723970.61317082	0.023294609519940813	0.06051568684824332	1.778781490021087e-07	6.7498773984627745	-0.12059255732458452	
(ac)SDY(ph)ENDDECWSVLEGFR	ddPTM_K562_Methotrexat_30min_R1	1	SDYENDDECWSVLEGFR	17	0	Q9H257;Q9H257-2;Q9H257-3	Q9H257	CARD9	Caspase recruitment domain-containing protein 9	1	S(0.015)DY(0.985)ENDDECWSVLEGFR	238.01	3.4373e-51	5844500.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)SESS(ph)SKSSQPLASK	ddPTM_K562_Methotrexat_30min_R1	1	SESSSKSSQPLASK	14	1	P17096;P17096-2;P17096-3;A0A669KAX1;A0A1W2PRV2	P17096	HMGA1	High mobility group protein HMG-I/HMG-Y	1	S(0.052)ES(0.052)S(0.295)S(0.295)KS(0.153)S(0.153)QPLASK	59.265	5.6385e-06	152080000.0	6152.8	4003.9	7924.3	5429.2	3588.4	3545.4	3778.1	4828.2	4829.8	6067.9	True	False	5882.330279154701	4665.476420336559	6261.097721966844	4953.230465376791	4060.3374972208244	4230.498372744675	4625.43509901387	4658.389469350189	4605.263652193243	4968.944510846811	1.1838188706503046	0.9389270518421358	1.2600458122040537	0.9968375486110345	0.8171428536497903	0.8513877270132185	0.9308687365932369	0.9375008030742333	0.9268092332567446	1.0	12.278723715788766	-7.5187278500487915	24.46401348006271	0.9056756919138239	1.1120154806792397	0.54253305232307	0.08877205951841764	98.25345308055276	579075.9266180228	0.024957902582842483	0.0330478273663614	3.028810833061477e-08	7.5187278500487915	0.2063397887654158	
(ac)SESSSKS(ph)SQPLASKQEK	ddPTM_K562_Methotrexat_30min_R1	2	SESSSKSSQPLASKQEK	17	2	P17096;P17096-2;P17096-3;A0A669KAX1	P17096	HMGA1	High mobility group protein HMG-I/HMG-Y	1	S(0.022)ES(0.022)S(0.02)S(0.02)KS(0.5)S(0.414)QPLAS(0.001)KQEK;S(0.011)ES(0.011)S(0.041)S(0.041)KS(0.448)S(0.448)QPLASKQEK	64.679	0.0003137	117691000.0	4465.2	2975.0	8949.400000000001	5082.799999999999	2643.9	2246.14	2113.01	2946.3	3220.7	7219.2	True	False	4268.915154479514	3466.5681836462586	7071.043240787214	4637.198815556093	2991.6191920917777	2680.174765881625	2586.906280555649	2842.676959021262	3070.9703599773848	5911.732924521718	0.7221089330291229	0.5863878202729731	1.196103296794195	0.7844060066247428	0.5060477579564898	0.4533653329913346	0.4375884894639316	0.48085341393382475	0.5194704157285384	1.0	12.529365378711187	-7.7120273243619515	5.5185081581572994	0.5279438229087797	0.8365267171675465	0.25104733441625304	0.2110495528433585	0.23395683043622836	15.703739497235759	0.062209983302968966	0.07942737196560783	1.9407637673608362e-08	7.7120273243619515	0.3085828942587667	
(ac)SESSSKSS(ph)QPLASKQEK	ddPTM_K562_Methotrexat_30min_R1	1	SESSSKSSQPLASKQEK	17	2	P17096;P17096-2;P17096-3;A0A669KAX1	P17096	HMGA1	High mobility group protein HMG-I/HMG-Y	1	S(0.022)ES(0.022)S(0.018)S(0.018)KS(0.238)S(0.681)QPLASKQEK	70.452	0.00031532	24626000.0	5049.4	3143.7	8588.7	5663.1	3046.6	2236.9	2312.5	3502.4	3454.6	7031.3	True	False	4827.434421980842	3663.1429912365516	6786.049241530064	5166.624815529968	3447.28130058883	2669.1492666532863	2831.136991204461	3379.2186068207834	3293.99640003039	5757.863435309942	0.838407245364093	0.6361983107783394	1.178570717727482	0.8973163176892631	0.5987084166408794	0.4635659210471718	0.4916992254179892	0.5868875920359307	0.5720865798639901	1.0	12.491317856207138	-7.770044003298668	7.848789163566964	0.583517731520025	0.8908677396408401	0.3235141390242494	0.1862816101688401	0.14068831548114094	56.91834959793946	0.056137165520499376	0.06675399901796561	1.698071592856786e-08	7.770044003298668	0.30735000812081514	
(ac)SET(ph)APLAPTIPAPAEK	ddPTM_K562_Methotrexat_30min_R1	1	SETAPLAPTIPAPAEK	16	0	P16402	P16402	HIST1H1D	Histone H1.3	1	S(0.262)ET(0.734)APLAPT(0.004)IPAPAEK	48.277	0.0018596	7498000.0	3851.0	3016.6	4200.9	3568.3	3280.0	2925.4	3100.8	3562.2	3411.9	3879.1	True	False	3681.7146510571993	3515.041876567163	3319.1884986952173	3255.472679143152	3711.3774916074835	3490.6921474663695	3796.233332898074	3436.915406925819	3253.2815137103244	3176.557400752464	1.1590266400302016	1.1065570153822872	1.044901155543094	1.024843019796209	1.1683646864773578	1.098891569420245	1.1950778323724989	1.081962317479823	1.0241532273081815	1.0	11.633248373699328	-9.739000575597828	3.406218335807357	1.0051248465193448	1.1106384984831297	0.393336819233732	0.04992078676469623	0.2582220101905715	5.802112101279875	0.04689261211386788	0.01369154096708691	1.8238932849973998e-10	9.739000575597828	0.10551365196378493	
(ac)SETAPAAPAAPAPAEKT(ph)PVK	ddPTM_K562_Methotrexat_30min_R1	2	SETAPAAPAAPAPAEKTPVK	20	1	P10412	P10412	HIST1H1E	Histone H1.4	1	S(0.067)ET(0.067)APAAPAAPAPAEKT(0.867)PVK;S(0.077)ET(0.077)APAAPAAPAPAEKT(0.846)PVK	69.081	6.479e-08	279957400.0	6498.5	5327.3	10591.099999999999	6127.4	4657.1	4272.3	3939.4	5566.1	5542.700000000001	7974.4	True	False	6212.833721084194	6207.545776382762	8368.172845945139	5590.220355402218	5269.590279318662	5097.861510091121	4822.910730011182	5370.337108104488	5285.02108679686	6530.15888648409	0.9514062106426406	0.9505964378953992	1.2814654270151544	0.8560619201735924	0.806962031234108	0.7806642378399872	0.7385594767063762	0.8223899604066046	0.8093250376703122	1.0	12.672902379336394	-7.495934516611042	24.391097664911047	0.8126517881390416	1.05321073269804	0.4919519704908959	0.10711888664621837	423.15691290850947	383060.1041398715	0.029532490702736523	0.04364487197675613	3.192019114891788e-08	7.495934516611042	0.2405589445589984	
(ac)SETAPAAPAAPAPAEKT(ph)PVKK	ddPTM_K562_Methotrexat_30min_R1	3	SETAPAAPAAPAPAEKTPVKK	21	2	P10412	P10412	HIST1H1E	Histone H1.4	1	SETAPAAPAAPAPAEKT(1)PVKK;S(0.131)ET(0.131)APAAPAAPAPAEKT(0.737)PVKK;S(0.001)ET(0.001)APAAPAAPAPAEKT(0.997)PVKK	72.033	6.0072e-05	151600000.0	7511.599999999999	4866.5	14423.8	8112.700000000001	4923.0	3971.6	3747.4	5772.799999999999	5445.9	10692.4	True	False	7181.39905813588	5670.606408643535	11396.441492889648	7401.472186779324	5570.460789995017	4739.055490831144	4587.849842525232	5569.767351945811	5192.721297668468	8755.902748525597	0.8201780289696745	0.6476324111295556	1.3015724157978672	0.8453122881048051	0.6361949133038309	0.5412412205730759	0.5239722247140968	0.6361157166671023	0.5930537886048206	1.0	13.096040215311712	-7.704787190096921	4.542956840033647	0.6237005352221108	0.9207400214104304	0.27143388427555193	0.19765745410163915	0.24796532480780578	10.421986020999528	0.05950883152774562	0.07602373200605526	1.973389485560968e-08	7.704787190096921	0.29703948618831966	
(ac)SETAPAET(ph)ATPAPVEKSPAK	ddPTM_K562_Methotrexat_30min_R1	1	SETAPAETATPAPVEKSPAK	20	1	P16401	P16401	HIST1H1B	Histone H1.5	1	S(0.135)ET(0.135)APAET(0.698)ATPAPVEKS(0.032)PAK	86.411	5.3288e-13	767790000.0	3915.1	2674.3	6363.3	3969.0	2442.1	2817.4	2373.9	3212.3	3378.2	4101.0	True	False	3742.9968918083737	3116.182619672334	5027.7302896396695	3621.043932270037	2763.278954955683	3361.822675966276	2906.3075041817397	3099.321588251026	3221.1482193546744	3358.269160497502	1.1145613150477425	0.9279133001985748	1.4971195128668155	1.0782470847969812	0.8228283150914336	1.0010581389694946	0.865418275094779	0.9228925497418691	0.9591691628664707	1.0	11.713502149526972	-7.534756340205278	15.56347457657756	0.927470696528976	1.176835878276314	0.4004312450304016	0.13961521353592996	2.5070642641081538	3282.8817615476037	0.04088430170513633	0.05306985207741209	2.91906428812567e-08	7.534756340205278	0.24936518174733802	
(ac)SETAPAETATPAPVEKS(ph)PAK	ddPTM_K562_Methotrexat_30min_R1	1	SETAPAETATPAPVEKSPAK	20	1	P16401	P16401	HIST1H1B	Histone H1.5	1	S(0.327)ET(0.03)APAET(0.03)AT(0.013)PAPVEKS(0.6)PAK	57.41	0.00014232	18230000.0	2319.4	1765.4	4135.3	2244.6	1537.3	1877.5	1445.3	2094.9	1788.5	2959.5	True	False	2217.441953171144	2057.1023433307914	3267.3570422181765	2047.8194029663184	1739.4818956854238	2240.3003031613134	1769.4453160595936	2021.2211795993753	1705.353025373227	2423.5058718586565	0.9149727999093	0.84881260954121	1.348194398931803	0.844982232865723	0.71775435573893	0.9244047349648724	0.730118023069841	0.8340071311852207	0.7036719180982807	1.0	11.24287986264447	-7.494654334135797	24.99441172818043	0.8082333619704354	1.0314940751084967	0.3030514042917315	0.1494673514099782	835.1718277043897	739595.160479476	0.04096908931761997	0.06061473383342598	3.201442204006574e-08	7.494654334135797	0.22326071313806128	
(ac)SETAPAETATPAPVEKS(ph)PAKK	ddPTM_K562_Methotrexat_30min_R1	2	SETAPAETATPAPVEKSPAKK	21	2	P16401	P16401	HIST1H1B	Histone H1.5	1	SETAPAETATPAPVEKS(1)PAKK;S(0.003)ETAPAET(0.003)ATPAPVEKS(0.994)PAKK	71.09100000000001	0.00081277	183120000.0	6768.9	3981.8999999999996	13730.4	8486.0	4664.4	3685.0	2890.6000000000004	5242.5	6156.5	10204.6	True	False	6471.347260852011	4639.841294272615	10848.57667701798	7742.045555364955	5277.850357272549	4397.074097017013	3538.890632119187	5058.118303522715	5870.28565877007	8356.448055404246	0.7744136286070598	0.5552408467700529	1.2982282191058478	0.9264756394145301	0.6315901591537185	0.5261893651302428	0.4234922072938072	0.6052952486495206	0.7024857475148983	1.0	13.028674133455324	-7.782315384802675	8.48907219273002	0.6106312418027717	0.8941339529859782	0.2078328387952505	0.2227445012787999	0.2810052047423634	95.15638778083348	0.07016199631310291	0.0814529103985323	1.6507625784904875e-08	7.782315384802675	0.28350271118320647	
(ac)SETAPLAPTIPAPAEKT(ph)PVKK	ddPTM_K562_Methotrexat_30min_R1	2	SETAPLAPTIPAPAEKTPVKK	21	2	P16402	P16402	HIST1H1D	Histone H1.3	1	S(0.001)ET(0.001)APLAPT(0.035)IPAPAEKT(0.964)PVKK;S(0.007)ET(0.003)APLAPT(0.017)IPAPAEKT(0.973)PVKK	80.293	4.5147e-05	21231100.0	4210.8	3057.9100000000003	7370.2	3905.0	2505.31	2329.59	2142.45	3084.3	3088.7	4709.8	True	False	4025.698273869555	3563.177651917221	5823.295739742322	3562.6547129036244	2834.80217789608	2779.7502973323935	2622.948949970163	2975.8234208021186	2945.10701116594	3856.8095811048815	1.0437897410315733	0.923866625247404	1.5098738004260224	0.9237310367505909	0.7350122214444351	0.7207382783300551	0.6800825643092165	0.7715764437480002	0.7636122419925744	1.0	11.913192203463288	-7.513444256526812	16.314641042076328	0.765640374969043	1.1491740314893284	0.5289553376500815	0.16037824287199068	3.5079273049554143	6064.98682770831	0.045717190239153764	0.06291042969639225	3.065884172946269e-08	7.513444256526812	0.38353365652028537	
(ac)SGDHLHNDS(ph)QIEADFR	ddPTM_K562_Methotrexat_30min_R1	2	SGDHLHNDSQIEADFR	16	0	P11387	P11387	TOP1	DNA topoisomerase 1	1	S(0.001)GDHLHNDS(0.999)QIEADFR;S(0.037)GDHLHNDS(0.963)QIEADFR	93.215	1.0716e-09	279200000.0	762.87	613.76	802.25	865.44	404.84999999999997	543.44	549.6800000000001	1040.29	838.3	1009.58	True	False	729.3351482347458	715.1734078637738	633.8686883949246	789.5682188822825	458.09487118210075	648.4520888149057	672.9597324649814	1003.7024110580147	799.3276159744908	826.7352789697793	0.8821870395365167	0.8650573237360498	0.7667130029636671	0.9550435779953508	0.5541010318961435	0.7843527490721844	0.8139966317919535	1.2140553773255687	0.9668483205053955	1.0	9.6912816414746	-9.187502039930768	8.547527488892005	1.0674039335340353	0.7990550257510275	0.5101804058559856	0.11541373540405474	0.2730636784331236	29.46868463887072	0.05404590775637905	0.03112023196208776	6.493785813637064e-10	9.187502039930768	-0.2683489077830078	
(ac)SIFT(ph)PTNQIR	ddPTM_K562_Methotrexat_30min_R1	2	SIFTPTNQIR	10	0	F8WE72;A0A087X020;Q9Y3A5	F8WE72	SBDS	Ribosome maturation protein SBDS	1	S(0.001)IFT(0.992)PT(0.007)NQIR;S(0.314)IFT(0.671)PT(0.015)NQIR	111.27	2.6037e-07	5246200.0	265.97	275.71000000000004	250.32	188.76	347.55	221.5	272.39	163.98	175.11	250.29	True	False	254.27827726348585	321.26639123129735	197.78125282520116	172.2117038688062	393.2589168317626	264.30174015990997	333.4803913661335	158.21273045525118	166.96917432099852	204.96005564031196	1.240623576477376	1.5674585480943342	0.9649746249693208	0.8402208095172631	1.9187100413453226	1.289528046497693	1.6270506481095233	0.7719198258459761	0.8146425107046988	1.0	7.67919896221403	-9.277503129855939	24.386900067115747	0.8449607900629914	1.343330425516125	0.3558185172087076	0.3002997725080764	701.2396380739335	1064566.778770538	0.16770646813131146	0.08099938054487263	5.278334027994121e-10	9.277503129855939	0.4983696354531335	
(ac)SKSES(ph)PKEPEQLR	ddPTM_K562_Methotrexat_30min_R1	1	SKSESPKEPEQLR	13	2	F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8W646	F8W6I7	HNRNPA1	Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed	1	S(0.169)KS(0.169)ES(0.661)PKEPEQLR	74.53699999999999	2.1626999999999998e-05	73136000.0	4890.0	3116.2	6738.6	4807.1	2748.9	2549.9	2660.1	3225.6	3657.1	5260.3	True	False	4675.041455120676	3631.0990836566275	5324.259948417626	4385.669006504231	3110.428532524335	3042.6320868341077	3256.695139590482	3112.1538197125155	3487.082219229761	4307.6086966508165	1.0852985459787794	0.8429500772620833	1.2360129072441655	1.0181214950917215	0.722077781796361	0.7063390157048774	0.7560331889297596	0.7224783026676095	0.8095169419499458	1.0	12.072671486020159	-7.723885652259346	7.0598619781235925	0.7667054624058866	1.0464703413923402	0.5266388989106049	0.11976407370901514	0.14496575480846802	20.399501470545605	0.034358833311211416	0.04384008844746814	1.888488513987246e-08	7.723885652259346	0.27976487898645364	
(ac)SLLDGLASS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	SLLDGLASSPR	11	0	E9PI10;E9PK87;F8W6N5;Q3YBR2	E9PI10	TBRG1	Transforming growth factor beta regulator 1	1	SLLDGLAS(0.071)S(0.929)PR;SLLDGLAS(0.054)S(0.946)PR	139.48	4.7060000000000004e-07	4458600.0	109.56	136.48	0.0	121.83	61.398999999999994	104.06	0.0	69.266	69.78399999999999	157.1	True	False	104.74387358343988	159.03100023665257	0.0	111.1493530532775	69.47404469731947	124.16812226203271	0.0	66.82987551965748	66.5397570716496	128.64766766987498	0.8141917803922023	1.2361747641219956	0.0	0.8639826517376109	0.5400334569266971	0.9651797386693608	0.0	0.5194798843236769	0.5172247447376849	1.0	7.007281491606589	-6.7328648093400885	24.999996405621204	0.5395130811221502	1.0251833223349014	0.23477571184713364	0.34214090514897944	287.7674281703275	251764.82699154443	0.08256530684532477	0.2183609133169347	1.8498443637112225e-07	6.7328648093400885	0.48567024121275115	
(ac)SLPES(ph)PHSPATLDYALEDPHQGQR	ddPTM_K562_Methotrexat_30min_R1	2	SLPESPHSPATLDYALEDPHQGQR	24	0	Q8N831	Q8N831	TSPYL6	Testis-specific Y-encoded-like protein 6	1	S(0.068)LPES(0.501)PHS(0.42)PAT(0.011)LDYALEDPHQGQR;S(0.085)LPES(0.481)PHS(0.212)PAT(0.212)LDY(0.011)ALEDPHQGQR	101.71	3.0713e-12	137226000.0	132.83	0.0	251.46	59.871	166.87900000000002	126.63	197.55	0.0	151.04	196.32	True	False	126.99095224615112	0.0	198.68198240422285	54.62220238572418	188.82651354328218	151.09945533385738	241.85561626483963	0.0	144.0181833672755	160.7645456203046	0.7899188950907104	0.0	1.2358569586199188	0.3397652273078386	1.1745532126794587	0.9398804615211968	1.5044089188424465	0.0	0.8958329886206325	1.0	7.328805465087935	-6.763246309018657	24.999999801848986	0.8653392987943677	0.3949595299073828	0.16042905480071523	0.4475436554795355	81.61255848022749	1129234.0805174105	0.11284206431143465	0.25599593590454595	1.724859364898953e-07	6.763246309018657	-0.47037976888698485	
(ac)SLPESPHSPAT(ph)LDY(ph)ALEDPHQGQR	ddPTM_K562_Methotrexat_30min_R1	1	SLPESPHSPATLDYALEDPHQGQR	24	0	Q8N831	Q8N831	TSPYL6	Testis-specific Y-encoded-like protein 6	2	S(0.378)LPES(0.378)PHS(0.287)PAT(0.526)LDY(0.431)ALEDPHQGQR	60.325	0.00029839	13029000.0	0.0	67.52	163.91	0.0	0.0	0.0	0.0	0.0	0.0	124.42	True	False	0.0	78.67653235623374	129.50753096268267	0.0	0.0	0.0	0.0	0.0	0.0	101.8863323455496	0.0	0.7721990824971562	1.2710981736338804	0.0	0.0	0.0	0.0	0.0	0.0	1.0	6.67081672234027	-15.663870857578472	12.192925516437793	9.491453185417743	0.2825885840145639	0.0	0.47859617042841496	0.0	0.0	0.0	0.1156645715825564	2.1683487922267508e-16	15.663870857578472	-9.20886460140318	
(ac)SLVIPEKFQHILR	ddPTM_K562_Methotrexat_30min_R1	1	SLVIPEKFQHILR	13	1	P62269;A0A0G2JQH2;Q5GGW2	P62269	RPS18	40S ribosomal protein S18	0		40.373000000000005	0.018563999999999997	4519200.0	3082.9	2337.4	3336.9	3360.5	2474.1	2213.7	2638.4	2848.1	2792.4	3889.7	False	True	2947.379407360231	2723.615620993198	2636.5302914366166	3065.890182512838	2799.4875158494133	2641.46619499771	3230.1283622027463	2747.930708681553	2662.5819334929815	3185.237638036362	0.9253248084740183	0.8550745440369261	0.8277342512698634	0.962531067039287	0.8788943978369047	0.8292838698923962	1.0140933673614565	0.8627082249271673	0.8359131204836611	1.0	11.63718529495444	-12.645887034081728	2.9300175086353435	1.0102158134724148	0.8883821375690871	0.24696717436552762	0.05869281938369999	95873787.53630158	93413050.97526251	7399235.241781375	0.014533129755181739	2.2600235567245574e-13	12.645887034081728	-0.12183367590332772	
(ac)SPGMTPGTPRS(ph)SGLFWR	ddPTM_K562_Methotrexat_30min_R1	1	SPGMTPGTPRSSGLFWR	17	1	H0Y5G8	H0Y5G8	ECE2		1	SPGMTPGT(0.103)PRS(0.449)S(0.449)GLFWR	60.598	0.022386	4216500.0	179.14	0.0	170.41	207.16	0.0	40.229	61.352	170.42	0.0	139.42	True	False	171.26522009617943	0.0	134.64326979043832	188.99860443664915	0.0	48.002684897936874	75.11174775540591	164.42623200502447	0.0	114.16968699257775	1.5000936291199038	0.0	1.1793259081037122	1.6554184338697195	0.0	0.4204503503724028	0.6578957141249672	1.4401916685268126	0.0	1.0	6.835035843709883	-7.764722833313334	24.99976122010536	0.6037076694212294	1.013131338774357	0.14669819131809547	0.5767079358364533	211.1859529060827	1607941.3519861375	0.17776865885536997	0.2099628682009356	1.7190051060115242e-08	7.764722833313334	0.4094236693531276	
(ac)SSAPT(ph)TPPSVDKVDGFSR	ddPTM_K562_Methotrexat_30min_R1	1	SSAPTTPPSVDKVDGFSR	18	1	Q16537-2;Q16537	Q16537-2	PPP2R5E	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform	1	S(0.1)S(0.1)APT(0.397)T(0.397)PPS(0.005)VDKVDGFS(0.001)R	43.593999999999994	0.027687	16539000.0	867.7	1056.6	1258.4	1039.3	830.37	915.98	834.37	804.72	1057.5	1168.3	True	False	829.5569469546436	1231.1851908708027	994.2790370535034	948.1861826173459	939.5782096664967	1092.9801713393874	1021.498711935683	776.4175414803622	1008.3370558189473	956.7095489415339	0.867093829963789	1.2868954765142022	1.0392694816870334	0.9910909571942521	0.9820934793700026	1.142436774618397	1.0677208281926625	0.811549902830342	1.0539636161618038	1.0	9.901937187732596														
(ac)SSENCFVAENS(ph)SLHPESGQENDATSPHFSTR	ddPTM_K562_Methotrexat_30min_R1	1	SSENCFVAENSSLHPESGQENDATSPHFSTR	31	0	B4E009;Q07108	B4E009	CD69	Early activation antigen CD69	1	S(0.032)S(0.032)ENCFVAENS(0.467)S(0.467)LHPES(0.001)GQENDATSPHFSTR	70.535	4.7755e-07	8859800.0	0.0	145.34	0.0	0.0	0.0	62.818999999999996	0.0	0.0	0.0	0.0	True	False	0.0	169.35496464240248	0.0	0.0	0.0	74.95788268670603	0.0	0.0	0.0	0.0											0.0														
(ac)SSEPPPPPQPPTHQASVGLLDTPRS(ph)R	ddPTM_K562_Methotrexat_30min_R1	3	SSEPPPPPQPPTHQASVGLLDTPRSR	26	1	Q9Y2V2;H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9	Q9Y2V2	CARHSP1	Calcium-regulated heat stable protein 1	1	SSEPPPPPQPPTHQAS(0.001)VGLLDT(0.003)PRS(0.995)R;SSEPPPPPQPPT(0.174)HQAS(0.149)VGLLDT(0.29)PRS(0.386)R;SSEPPPPPQPPTHQASVGLLDT(0.006)PRS(0.994)R	86.88600000000001	3.7912e-08	433900000.0	122.97	0.0	0.0	181.038	0.0	58.562	129.64	106.47	0.0	67.545	True	False	117.56438604012048	0.0	0.0	165.16667961962779	0.0	69.87827768507742	158.71507007124174	102.7253897522295	0.0	55.31194597556783	2.12547911606745	0.0	0.0	2.9860941738080333	0.0	1.263348747772204	2.8694537368355966	1.8572007898186216	0.0	1.0	5.789519194488031														
(ac)SSILPFT(ph)PPVVKR	ddPTM_K562_Methotrexat_30min_R1	1	SSILPFTPPVVKR	13	1	K7ESI8;K7EL92;K7ERC7;K7EJX0;B7Z5N5;Q15796-2;Q15796	K7ESI8	SMAD2	Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 2	1	S(0.153)S(0.153)ILPFT(0.695)PPVVKR	62.042	0.016564	104070000.0	1844.3	1455.1	2153.2	1911.1	1542.7	1273.7	1583.7	1792.8	1617.6	2075.6	True	False	1763.2267803024668	1695.5305425289655	1701.2727452190124	1743.556830174167	1745.5920903362403	1519.8244986080244	1938.8850391223812	1729.7462078312856	1542.3981290711401	1699.6887270247762	1.037382170198252	0.9975535611728805	1.000931946049327	1.0258094923216794	1.0270069234334547	0.8941781365276243	1.140729480812823	1.0176841090539699	0.907459174463688	1.0	10.73105484685114	-9.729001934032114	24.33052100164071	0.9537296108101123	1.0170012727911302	0.15399375075254962	0.059921681013488715	228.60313426626777	171470.29978311385	0.039366171980634065	0.014876005144294706	1.8663713793539298e-10	9.729001934032114	0.06327166198101786	
(ac)SVPAFIDIS(ph)EEDQAAELR	ddPTM_K562_Methotrexat_30min_R1	1	SVPAFIDISEEDQAAELR	18	0	E9PRI2;E7ESM3;Q7L2H7	E9PRI2	EIF3M	Eukaryotic translation initiation factor 3 subunit M	1	SVPAFIDIS(1)EEDQAAELR	94.387	0.0019982	2141300.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)TAAPAS(ph)PQQIRDR	ddPTM_K562_Methotrexat_30min_R1	1	TAAPASPQQIRDR	13	1	O95402;B8ZZF3;M0R2Y4;O95402-2	O95402	MED26	Mediator of RNA polymerase II transcription subunit 26	1	TAAPAS(1)PQQIRDR	69.314	0.00025965	11317000.0	576.08	525.34	899.8	638.34	662.68	680.38	458.71	662.86	597.15	876.12	True	False	550.7562129787152	612.1435057467986	710.9442764945509	582.3777232867859	749.8340354080639	811.8538057336319	561.5873942639562	639.5468380873752	569.3886268390397	717.4461782236215	0.7676620625987215	0.8532256834407431	0.9909374362475954	0.8117371601710087	1.0451432569682564	1.1315884457615502	0.7827589181036999	0.8914213462964943	0.7936325317793614	1.0	9.486726796723557	-6.496341279038143	4.026639236229944	0.9288623321520986	0.7782294539416832	0.18214044176055944	0.10894772493608078	0.3858392636700606	13.552986813229674	0.02890749130370004	0.1168346846168681	3.189030853135238e-07	6.496341279038143	-0.15063287821041538	
(ac)TECFLPPT(ph)SSPSEHR	ddPTM_K562_Methotrexat_30min_R1	1	TECFLPPTSSPSEHR	15	0	J3QLT3;E7ENF8;A0A1W2PRI7;Q15311	J3QLT3	RALBP1	RalA-binding protein 1	1	T(0.001)ECFLPPT(0.331)S(0.331)S(0.331)PS(0.004)EHR	79.804	0.0055927	17102000.0	74.528	0.0	0.0	118.36	172.95	0.0	0.0	131.43	158.68	0.0	True	False	71.25183835730749	0.0	0.0	107.98356256575492	195.6959564553398	0.0	0.0	126.80753240476685	151.3030014348469	0.0											0.0														
(ac)TECFLPPT(ph)SSPSEHRR	ddPTM_K562_Methotrexat_30min_R1	1	TECFLPPTSSPSEHRR	16	1	J3QLT3;E7ENF8;A0A1W2PRI7;Q15311	J3QLT3	RALBP1	RalA-binding protein 1	1	TECFLPPT(0.358)S(0.358)S(0.185)PS(0.099)EHRR	105.99	1.3144e-10	23434000.0	0.0	0.0	148.57	0.0	0.0	63.098	0.0	0.0	136.95	0.0	True	False	0.0	0.0	117.38718732917917	0.0	0.0	75.29079548808126	0.0	0.0	130.58322439187225	0.0											0.0														
(ac)TECFLPPTSS(ph)PSEHR	ddPTM_K562_Methotrexat_30min_R1	2	TECFLPPTSSPSEHR	15	0	J3QLT3;E7ENF8;A0A1W2PRI7;Q15311	J3QLT3	RALBP1	RalA-binding protein 1	1	TECFLPPT(0.074)S(0.074)S(0.735)PS(0.117)EHR;T(0.002)ECFLPPT(0.003)S(0.184)S(0.626)PS(0.184)EHR	108.66	2.6833000000000002e-05	65561000.0	241.68	149.73	534.41	430.18	190.87900000000002	265.01	190.58	446.65	390.52	403.63	True	False	231.05603657946108	174.47033752516109	422.2446441447578	392.4667872975371	215.98293421358085	316.219431872586	233.32241633891735	430.94106633637006	372.36481043821794	330.52869574533185	0.6990498542295608	0.5278523159138602	1.2774825592453005	1.187390965896431	0.6534468474107705	0.9567079528738679	0.7059066862947636	1.3037932012668718	1.1265733209594615	1.0	8.36863171842854	-9.264063792705722	24.980534204087952	1.1613874433860942	0.8702458536435629	0.2375196249541448	0.2328060157419235	360.4866534875544	3431251.3810786093	0.12683940586150788	0.06532036939818914	5.444226777380435e-10	9.264063792705722	-0.29114158974253135	
(ac)TECFLPPTSS(ph)PSEHRR	ddPTM_K562_Methotrexat_30min_R1	2	TECFLPPTSSPSEHRR	16	1	J3QLT3;E7ENF8;A0A1W2PRI7;Q15311	J3QLT3	RALBP1	RalA-binding protein 1	1	TECFLPPT(0.021)S(0.252)S(0.703)PS(0.024)EHRR;TECFLPPT(0.112)S(0.112)S(0.495)PS(0.28)EHRR	99.927	1.1170999999999999e-06	92531000.0	287.88	184.495	354.97	256.031	147.77	281.35	403.42999999999995	155.58	199.61	238.83	True	False	275.22513989777894	214.97966287119877	280.46664795206806	233.58515974377173	167.2043451020848	335.7169056162108	493.9094470752932	150.10816321641656	190.33017466857694	195.57557268998247	1.407257236229871	1.099215305440904	1.4340576591160037	1.1943473130667517	0.8549347078590922	1.7165584689268634	2.5254148065730893	0.7675199982891586	0.9731796872724986	1.0	7.611582379289124	-8.274349474020141	24.567491274648496	1.4525595568878	1.2053920247505323	0.03393230302122663	0.4849599677511225	2248.5878216421856	4278974.402040101	0.18083564251941958	0.16052497917049122	5.316802473515864e-09	8.274349474020141	-0.24716753213726772	
(ac)TYTLFEY(ph)AK	ddPTM_K562_Methotrexat_30min_R1	1	TYTLFEYAK	9	0	Q6NW29-2	Q6NW29-2			1	TYTLFEY(1)AK	45.081	0.033663	0.0	210.35	115.89	162.49	200.2	137.54	122.98	168.91	171.0	153.1	142.36	True	False	201.10326586597827	135.03885270681175	128.38556955723442	182.64877683055204	155.62892079137	146.74414449149316	206.79236721485222	164.98583307627737	145.98241441690865	116.57722450339531	1.725064794797213	1.1583639367128589	1.10129204142697	1.5667620979021712	1.3349856411003962	1.2587719866947016	1.773865933897143	1.4152492802869239	1.2522378624021617	1.0	6.865142148934816	-10.055565843837142	3.2371538634511854	1.0009133216901727	1.4055308593548754	0.2714850467415332	0.2108091338016542	0.39959239701805305	10.480106075238298	0.20529703309460975	0.05458208531236665	8.799016987643703e-11	10.055565843837142	0.40461753766470276	
(ac)VAGMLGLS(ph)CK	ddPTM_K562_Methotrexat_30min_R1	1	VAGMLGLSCK	10	0	H7BY72	H7BY72	MECP2		1	VAGMLGLS(1)CK	63.076	0.019658000000000002	26504000.0	274.91	234.76	315.57	263.91	291.23	215.5	192.95	154.98	278.05	239.72	True	False	262.82528556793955	273.5500997622842	249.33616951921024	240.77342004670828	329.5318496587952	257.14232507657175	236.22394916882195	149.52926555649975	265.1235161895589	196.30438506570607	1.3388660955279623	1.3934996901405072	1.2701507887139334	1.2265310322340366	1.6786779854586327	1.3099163576529496	1.2033554374740747	0.7617214740590234	1.3505735804160364	1.0	7.61694858999546	-8.907014795438487	3.4968853617978444	1.0332888732139454	1.3740728075029922	0.4149571538859155	0.17607167335073848	0.22264377901691423	5.333440510174293	0.07823130874850868	0.04989066044847387	1.2387543842292696e-09	8.907014795438487	0.34078393428904685	
(ac)VDYS(ph)VWDHIEVSDDEDETHPNIDTASLFR	ddPTM_K562_Methotrexat_30min_R1	2	VDYSVWDHIEVSDDEDETHPNIDTASLFR	29	0	K7EJ06;K7EQA9;K7EKQ2;Q16543	K7EJ06	CDC37	Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed	1	VDY(0.321)S(0.358)VWDHIEVS(0.321)DDEDET(0.001)HPNIDTASLFR;VDY(0.321)S(0.346)VWDHIEVS(0.321)DDEDET(0.011)HPNIDTASLFR	64.289	9.240200000000001e-13	296284000.0	0.0	123.67	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	144.10436546942276	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
(ac)VDYSVWDHIEVS(ph)DDEDETHPNIDTASLFR	ddPTM_K562_Methotrexat_30min_R1	2	VDYSVWDHIEVSDDEDETHPNIDTASLFR	29	0	K7EJ06;K7EQA9;K7EKQ2;Q16543	K7EJ06	CDC37	Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed	1	VDY(0.108)S(0.118)VWDHIEVS(0.773)DDEDET(0.001)HPNIDTASLFR;VDY(0.208)S(0.236)VWDHIEVS(0.554)DDEDET(0.001)HPNIDTASLFR	58.858000000000004	1.0372e-11	273690000.0	231.57	60.254	228.49	281.33	0.0	159.38	65.878	0.0	229.53	269.26	True	False	221.39046007408876	70.20994935711653	180.5330715006	256.66623569300293	0.0	190.1779293304129	80.6528184677049	0.0	218.8592003991707	220.49440481725355	1.0040638457813833	0.31842054865431507	0.8187648645788829	1.1640487472039425	0.0	0.8625068263661064	0.36578170105744956	0.0	0.9925839187645686	1.0	7.784598236737484	-6.232094962452544	22.596716873910665	0.5867944657028473	1.0040661911966384	0.07521850796810436	0.4009963494475512	7439.584512075197	5728525.210135219	0.09681390591865514	8.203996225797088	5.860100140654529e-07	6.232094962452544	0.4172717254937911	
(ac)VTSGLGSGGVRR	ddPTM_K562_Methotrexat_30min_R1	2	VTSGLGSGGVRR	12	1	Q6UX15-3;A0A0D9SFG0	Q6UX15-3	LAYN	Layilin	0	;	56.258	0.030381000000000002	5401300.0	1148.41	1127.3	1427.0800000000002	1389.25	969.39	894.35	1115.74	1063.58	1398.01	1310.34	False	True	1097.9272714673077	1313.5671641762785	1127.555410202093	1267.4566094497718	1096.8817763992013	1067.1704799639526	1365.9730968936067	1026.173288557117	1333.0168202415578	1073.0247285457926	1.0232077996517974	1.2241723133039804	1.0508195945588343	1.1811998136962614	1.0222334557804094	0.9945441624725891	1.273011758773565	0.9563370360977882	1.2422983224702726	1.0	10.067467608975809	-13.5003657809372	1.9475177127694356	5.186404329027527e-05	1.106052673578683	0.08101893987909514	0.10854775128531134	1694600.2014213228	138391.0142972392	7470138.727609506	0.025417306563802804	3.1596153792501376e-14	13.5003657809372	1.1060008095353928	
AAAAAAAAAAAATGTEAGPGT(ph)AGGSENGSEVAAQPAGLSGPAEVGPGAVGERTPR	ddPTM_K562_Methotrexat_30min_R1	1	AAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTPR	55	1	R4GMQ1;O60341;O60341-2	R4GMQ1	KDM1A	Lysine-specific histone demethylase 1A	1	AAAAAAAAAAAAT(0.013)GT(0.013)EAGPGT(0.219)AGGS(0.219)ENGS(0.219)EVAAQPAGLS(0.191)GPAEVGPGAVGERT(0.127)PR	64.083	5.6273e-11	19101000.0	1107.2	1139.6	1119.7	1071.9	1038.6	1181.0	1156.0	1300.4	1264.7	1656.1	True	False	1058.5288137238463	1327.8995301120262	884.6902716058548	977.9281912321115	1175.1941045071749	1409.2115355704457	1415.2624267383164	1254.6641949262632	1205.904373044183	1356.1642420628898	0.7805314289320119	0.9791583415384338	0.6523474400564743	0.7210986404895653	0.8665573593944362	1.0391156851524594	1.0435774538528837	0.9251565230902765	0.8892023072440376	1.0	10.405316195334528	-8.03463084978174	5.17069390762665	0.9774401919027408	0.7879097688632954	0.5213027837360884	0.08877803878413063	0.1749077615274645	12.175209260822319	0.031053551412256863	0.0322450120063391	9.233559460469856e-09	8.03463084978174	-0.18953042303944534	
AAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLS(ph)GPAEVGPGAVGERTPR	ddPTM_K562_Methotrexat_30min_R1	1	AAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTPR	55	1	R4GMQ1;O60341;O60341-2	R4GMQ1	KDM1A	Lysine-specific histone demethylase 1A	1	AAAAAAAAAAAAT(0.001)GT(0.001)EAGPGT(0.066)AGGS(0.057)ENGS(0.289)EVAAQPAGLS(0.338)GPAEVGPGAVGERT(0.248)PR	77.67699999999999	2.3469e-15	25652000.0	3215.8	3011.2	4097.0	3659.1	3095.0	3075.0	3214.3	3567.5	4015.0	4171.0	True	False	3074.4372824901952	3508.7496183514672	3237.095688817707	3338.3123841192446	3502.0467489406	3669.2002302109418	3935.1885971150305	3442.029002921752	3828.3435263480633	3415.59148218363	0.9001185588285486	1.0272743788751575	0.9477408834466913	0.9773746074530612	1.0253119458834399	1.0742503163361845	1.1521250763276922	1.0077402467115946	1.1208435043585938	1.0	11.73791971808898	-7.945822416426626	2.3716152067257474	1.0761956712901615	0.9650539230455063	0.4908913162887326	0.051700999841046744	0.24561246518598637	2.8009625952247004	0.017142580493155538	0.019379401966334062	1.1328634978852588e-08	7.945822416426626	-0.11114174824465517	
AAAAAAAATMALAAPS(ph)SPTPESPT(ph)MLTK	ddPTM_K562_Methotrexat_30min_R1	1	AAAAAAAATMALAAPSSPTPESPTMLTK	28	0	Q9NQS7;Q9NQS7-2;E9PM67	Q9NQS7	INCENP	Inner centromere protein	2	AAAAAAAATMALAAPS(0.347)S(0.347)PT(0.309)PES(0.3)PT(0.442)MLT(0.255)K	110.6	2.9635e-12	10994000.0	2526.4	1941.9	3580.7	2943.2	1728.5	1737.4	1969.6	2704.6	2424.6	3435.4	True	False	2415.3424810259435	2262.7659683437546	2829.160003160743	2685.17422561279	1955.82804702547	2073.1279609653625	2411.332937460024	2609.477685018126	2311.8808752138248	2813.215770293372	0.8585699349943795	0.8043343110179514	1.0056676181883157	0.9544857006587769	0.6952285948622808	0.7369246194539744	0.8571446822255521	0.9275782229622581	0.8217929458616442	1.0	11.458004494546872	-12.30198100526911	2.8684096115084334	1.0014657164980787	0.8519571638434881	0.1973832139207672	0.08994572648478494	21284762.321137104	26114159.211767606	268866.59450576344	0.02524160483262175	4.989063076401261e-13	12.30198100526911	-0.14950855265459062	
AAAAAATAPPS(ph)PGPAQPGPR	ddPTM_K562_Methotrexat_30min_R1	4	AAAAAATAPPSPGPAQPGPR	20	0	Q6SPF0	Q6SPF0	SAMD1	Atherin	1	AAAAAATAPPS(1)PGPAQPGPR;AAAAAAT(0.021)APPS(0.979)PGPAQPGPR;AAAAAAT(0.006)APPS(0.994)PGPAQPGPR;AAAAAATAPPS(1)PGPAQPGPR	231.38	5.406999999999999e-47	1138440000.0	21362.399999999998	18052.7	23766.100000000002	22081.5	18686.4	18909.9	19451.0	21948.9	21551.1	23483.699999999997	True	False	20423.334474615513	21035.60183156666	18777.920392973054	20145.64917874043	21143.98913389454	22563.970547403525	23813.38188796454	21176.94474624505	20549.19406492644	19230.57436829436	1.0620241540100679	1.0938623791834456	0.9764617547738146	1.0475843723084404	1.0994985760152254	1.173338357725028	1.2383084057658673	1.101212285222208	1.0685689190233496	1.0	14.231114232498458	-7.878447102898777	3.783079028310827	1.1307072744317157	1.0434777191247193	0.19519888278155295	0.06534135271619962	0.3219603411780232	8.70405190130094	0.021536949165991665	0.024896315127567147	1.3229788371208513e-08	7.878447102898777	-0.08722955530699639	
AAAAGLGHPAS(ph)PGGS(ph)EDGPPGS(ph)EEEDAAR	ddPTM_K562_Methotrexat_30min_R1	3	AAAAGLGHPASPGGSEDGPPGSEEEDAAR	29	0	Q99856	Q99856	ARID3A	AT-rich interactive domain-containing protein 3A	3	AAAAGLGHPAS(1)PGGS(1)EDGPPGS(1)EEEDAAR;AAAAGLGHPAS(1)PGGS(1)EDGPPGS(1)EEEDAAR;AAAAGLGHPAS(1)PGGS(1)EDGPPGS(1)EEEDAAR	125.97	1.1778e-14	109033000.0	5296.7	4816.700000000001	6968.8	5540.8	5528.2	4832.9	4922.1	5657.8	6108.7	6107.6	True	False	5063.863410089503	5612.577805098801	5506.1441142867625	5055.046666646968	6255.255197897709	5766.789526044372	6026.006220284317	5458.811967128432	5824.707870336838	5001.454456145951	1.0124781610011189	1.122189126045501	1.1009085782078116	1.0107153251061123	1.2506872256351445	1.1530225010762525	1.2048507635372674	1.0914449016766443	1.1646028013269714	1.0	12.288131985856301	-4.604076506863832	0.679471551705232	1.1388583839403525	4.672185418439035e-15	0.14805671204136872	0.0747884419277747	44.43992127672871	2.537152924140604	0.029801832938228943	63.57914479132454	2.4884189109233245e-05	4.604076506863832	-1.1388583839403479	
AAAAGLGHPAS(ph)PGGSEDGPPGS(ph)EEEDAAR	ddPTM_K562_Methotrexat_30min_R1	3	AAAAGLGHPASPGGSEDGPPGSEEEDAAR	29	0	Q99856	Q99856	ARID3A	AT-rich interactive domain-containing protein 3A	2	AAAAGLGHPAS(1)PGGS(0.001)EDGPPGS(0.999)EEEDAAR;AAAAGLGHPAS(1)PGGS(0.001)EDGPPGS(0.999)EEEDAAR;AAAAGLGHPAS(1)PGGSEDGPPGS(1)EEEDAAR	139.19	1.2099999999999998e-21	95098000.0	7335.299999999999	7230.3	9248.3	7140.4	6789.8	6769.9	5934.6	7820.4	7588.8	7631.0	True	False	7012.848995040217	8424.984180913465	7307.208215497392	6514.412218186181	7682.777711133077	8078.087362115466	7265.585119136005	7545.352099355078	7235.9983443960555	6248.95195409813	1.1222440253266974	1.3482235489726033	1.1693493995749553	1.042480765740879	1.2294505970868648	1.29271074917095	1.1626885872231993	1.2074588114582565	1.1579539093192435	1.0	12.6093985324509	-10.243338171555045	2.3827158191689364	1.0000043571405304	1.1990976838345389	0.34836624160715113	0.08043831709626963	1.3195437594443566	11.014580360324862	0.07886970847413563	0.021438570702674378	5.7103381730413685e-11	10.243338171555045	0.19909332669400848	
AAAAGLGHPAS(ph)PGGSEDGPPGS(ph)EEEDAAREGT(ph)PGSPGRGR	ddPTM_K562_Methotrexat_30min_R1	1	AAAAGLGHPASPGGSEDGPPGSEEEDAAREGTPGSPGRGR	40	2	Q99856	Q99856	ARID3A	AT-rich interactive domain-containing protein 3A	3	AAAAGLGHPAS(0.86)PGGS(0.488)EDGPPGS(0.815)EEEDAAREGT(0.454)PGS(0.383)PGRGR	54.867	0.00063191	9952600.0	615.28	650.48	880.81	815.13	718.85	705.85	765.15	680.51	745.34	865.85	True	False	588.2330279154696	757.9607637304939	695.9400179808457	743.6688184709681	813.3913749518413	842.2455227624038	936.754364895176	656.57607758326	710.6893060842498	709.0361747419561	0.8296234365327677	1.0690015414324145	0.9815296352603214	1.0488446781176095	1.1471789507042625	1.187873838833297	1.32116582801448	0.9260121006127957	1.0023315190411763	1.0	9.469715424841024	-5.415564997913977	0.9022171986802567	1.0991730157061	1.285532970497236e-18	0.3037525511132887	0.11061174618389477	11.395445188089646	2.3758735827523028	0.039768634148215465	17.707207369007175	3.8409177046275445e-06	5.415564997913977	-1.0991730157061	
AAAAGLGHPAS(ph)PGGSEDGPPGS(ph)EEEDAAREGTPGSPGR	ddPTM_K562_Methotrexat_30min_R1	1	AAAAGLGHPASPGGSEDGPPGSEEEDAAREGTPGSPGR	38	1	Q99856	Q99856	ARID3A	AT-rich interactive domain-containing protein 3A	2	AAAAGLGHPAS(0.608)PGGS(0.397)EDGPPGS(0.654)EEEDAAREGT(0.17)PGS(0.17)PGR	49.152	0.0028066	33638000.0	1382.5	1230.8	2080.7	1488.0	1424.6	1268.3	1345.7	1581.0	1722.5	1727.0	True	False	1321.7269553587591	1434.1687799770814	1643.9895044478903	1357.5493502690379	1611.9598702878125	1513.381025033019	1647.507480676257	1525.3953338806687	1642.421350967505	1414.2235650278428	0.9345954826687797	1.014103296990986	1.1624679047230584	0.9599255618699232	1.139819693399096	1.0701144164594825	1.164955471975763	1.0786097556298584	1.16135906060593	1.0	10.46579448872868	-6.530787544969269	5.1170910044556	1.0938960517528944	0.9501327089177725	0.3605609313137915	0.06657662189382126	0.1571563480450209	12.247013864452894	0.01600272982182782	0.05160353067932282	2.945862384832198e-07	6.530787544969269	-0.14376334283512193	
AAAAGLGHPAS(ph)PGGSEDGPPGS(ph)EEEDAAREGTPGSPGRGR	ddPTM_K562_Methotrexat_30min_R1	1	AAAAGLGHPASPGGSEDGPPGSEEEDAAREGTPGSPGRGR	40	2	Q99856	Q99856	ARID3A	AT-rich interactive domain-containing protein 3A	2	AAAAGLGHPAS(0.622)PGGS(0.235)EDGPPGS(0.624)EEEDAAREGT(0.268)PGS(0.25)PGRGR	46.43	0.0032555	19930000.0	1542.1	1216.5	1578.5	2200.5	1150.1	1501.5	1296.2	1286.9	1330.0	1959.9	True	False	1474.3111304584029	1417.5059480355205	1247.1944214788275	2007.5855814966515	1301.3583088712705	1791.6436246054386	1586.9058456212852	1241.6389975781358	1268.1685902971167	1604.9431181807001	0.9186064688259005	0.8832125774291297	0.7770957159482372	1.2508764695488839	0.8108438823342466	1.116328425792669	0.9887614256511088	0.7736342699706446	0.7901641970555706	1.0	10.648306451434694	-9.250532426390238	24.69440096127529	0.8364244232976895	0.9644435409307299	0.10433640865017457	0.14350448002644015	1170.2864627178112	2649650.6233748305	0.06691670185407728	0.038142728322257236	5.616523412860215e-10	9.250532426390238	0.1280191176330404	
AAAAGLGHPAS(ph)PGGSEDGPPGSEEEDAAR	ddPTM_K562_Methotrexat_30min_R1	2	AAAAGLGHPASPGGSEDGPPGSEEEDAAR	29	0	Q99856	Q99856	ARID3A	AT-rich interactive domain-containing protein 3A	1	AAAAGLGHPAS(0.999)PGGS(0.001)EDGPPGSEEEDAAR;AAAAGLGHPAS(0.869)PGGS(0.131)EDGPPGSEEEDAAR	167.04	4.1121999999999995e-35	59273000.0	4188.6	3874.8	5156.6	4613.2	4501.9	3840.4	3755.1000000000004	4603.4	4793.5	5361.8	True	False	4004.4741592880296	4515.044839661352	4074.300129108472	4208.767918455058	5093.978758984069	4582.502947675479	4597.276763533786	4441.49581276804	4570.651231270095	4390.72606309571	0.9120300610292797	1.0283139450694836	0.9279331187051693	0.9585585294946957	1.160167745785654	1.043677715672509	1.0470424930797086	1.0115629508520363	1.0409784544945007	1.0	12.100243812353243	-7.626337034588911	21.02774586094423	1.0514325264991171	0.9596845320579955	0.4654163973827681	0.049233158129940315	3.361249265864336	671.6198059180201	0.014326144456571415	0.018494951219672505	2.3640843358229552e-08	7.626337034588911	-0.09174799444112158	
AAAAGLGHPASPGGSEDGPPGS(ph)EEEDAAR	ddPTM_K562_Methotrexat_30min_R1	2	AAAAGLGHPASPGGSEDGPPGSEEEDAAR	29	0	Q99856	Q99856	ARID3A	AT-rich interactive domain-containing protein 3A	1	AAAAGLGHPASPGGSEDGPPGS(1)EEEDAAR;AAAAGLGHPASPGGS(0.116)EDGPPGS(0.884)EEEDAAR	150.62	8.676899999999999e-29	38500000.0	3709.8	3759.0	5090.200000000001	3675.3	3954.1	3216.1	3694.3	3585.8	3949.3	4528.9	True	False	3546.7216339890947	4380.110857924801	4021.8365816987825	3353.092155271368	4474.133457184497	3837.5658082541177	4522.840815829903	3459.685381549212	3765.69790500782	3708.6723240617257	0.9563318956431117	1.1810455265909603	1.0844410695453623	0.9041219774302067	1.206397617863538	1.034754616458331	1.2195309859234214	0.9328635908605093	1.0153762791541636	1.0	11.85668709029362	-9.306150213731666	24.997462634886617	0.9805899500368797	1.0834860261805916	0.17987763882856211	0.09885005114733784	782.2290747566142	437333.67945448216	0.051739891435793446	0.02485526094279308	4.941397444207021e-10	9.306150213731666	0.10289607614371199	
AAAAGLGHPASPGGSEDGPPGS(ph)EEEDAAREGTPGSPGR	ddPTM_K562_Methotrexat_30min_R1	1	AAAAGLGHPASPGGSEDGPPGSEEEDAAREGTPGSPGR	38	1	Q99856	Q99856	ARID3A	AT-rich interactive domain-containing protein 3A	1	AAAAGLGHPAS(0.006)PGGS(0.412)EDGPPGS(0.459)EEEDAAREGT(0.043)PGS(0.081)PGR	49.152	0.0019759	22527000.0	1122.4	1107.9	1313.8	1223.0	1165.1	1139.5	932.63	1343.0	1042.6	1524.7	True	False	1073.060639923813	1290.9616439198965	1038.0513341392991	1115.781488829996	1318.3310717902077	1359.692247910688	1141.7960182084407	1295.7659287803542	994.1297535667472	1248.5620553549222	0.8594371704006171	1.0339587354774462	0.8313974701435386	0.8936532101424616	1.0558794944440728	1.0890065432303846	0.9144888019873937	1.0378065897669888	0.7962197387811463	1.0	10.286051811757575	-7.730754301206616	24.997359495816355	0.9860753192196917	0.9086210992794442	0.14580018291882735	0.09155510744380242	414.63033618705464	337773.736583508	0.026800853447654375	0.03459580004968691	1.8588557911685066e-08	7.730754301206616	-0.07745421994024748	
AAAAGLGHPASPGGSEDGPPGS(ph)EEEDAAREGTPGSPGRGR	ddPTM_K562_Methotrexat_30min_R1	1	AAAAGLGHPASPGGSEDGPPGSEEEDAAREGTPGSPGRGR	40	2	Q99856	Q99856	ARID3A	AT-rich interactive domain-containing protein 3A	1	AAAAGLGHPAS(0.005)PGGS(0.126)EDGPPGS(0.728)EEEDAAREGT(0.107)PGS(0.034)PGRGR	47.318999999999996	0.0014994000000000001	19327000.0	1428.4	1057.5	1436.7	1825.8	1133.3	1168.2	1235.5	1095.4	1117.8	1487.4	True	False	1365.6092463178668	1232.2339005734175	1135.1563036671714	1665.7349487373726	1282.3488144020612	1393.9381167259912	1512.592325462968	1056.874161121369	1065.8337219805383	1218.0174467993124	1.1211737975563436	1.0116717981433376	0.931970479281818	1.3675788906920547	1.052816458230379	1.1444319786953465	1.2418478318498103	0.8677003469027531	0.8750562028329888	1.0	10.25031908312027	-9.276169530751286	24.74451411975083	0.9035336794620196	1.1201132057151226	0.39790505065303794	0.11821080912894301	748.6805694967479	1257666.4022161886	0.06521566204945149	0.03153897118461329	5.29456725359421e-10	9.276169530751286	0.21657952625310306	
AAAAPGASPS(ph)PGGDAAWSEAGPGPRPLAR	ddPTM_K562_Methotrexat_30min_R1	4	AAAAPGASPSPGGDAAWSEAGPGPRPLAR	29	1	F8WAX8;P52701-2;P52701;F8W7G9;P52701-3	F8WAX8	MSH6	DNA mismatch repair protein Msh6	1	AAAAPGAS(0.108)PS(0.866)PGGDAAWS(0.026)EAGPGPRPLAR;AAAAPGAS(0.064)PS(0.936)PGGDAAWSEAGPGPRPLAR;AAAAPGAS(0.164)PS(0.835)PGGDAAWSEAGPGPRPLAR;AAAAPGAS(0.135)PS(0.865)PGGDAAWSEAGPGPRPLAR	99.95700000000001	2.4847e-08	1034973000.0	5496.4	5037.2699999999995	6496.0	5815.6	4995.08	4329.74	4296.22	5751.3	5932.2	5830.5	True	False	5254.784837203533	5869.5932485498415	5132.578373092469	5305.75537730149	5652.020573408145	5166.400977155615	5259.756698098348	5549.023519132131	5656.413316812448	4774.539951299848	1.1005845360604722	1.2293526304983309	1.0749890932832484	1.1112600232525063	1.1837832819619418	1.0820730436550403	1.101625863800009	1.1622111398651995	1.1847033168656413	1.0	12.221146014260109	-13.152351493953466	2.4151606402357744	0.6817412874536671	1.1363836433289738	0.41484994379697626	0.0487151082027673	1470199.958469891	838244.6254681564	2537321.7551060836	0.012427729387533776	7.041229600786402e-14	13.152351493953466	0.45464235587530666	
AAADGGGPGGASVGTEEDGGGVGHR	ddPTM_K562_Methotrexat_30min_R1	1	AAADGGGPGGASVGTEEDGGGVGHR	25	0	A6NHR9-2;A6NHR9	A6NHR9-2	SMCHD1	Structural maintenance of chromosomes flexible hinge domain-containing protein 1	0		66.24600000000001	0.026517000000000002	11513000.0	742.06	904.89	891.06	945.85	1110.6	1130.0	1170.0	937.92	957.46	814.98	False	True	709.4399309175556	1054.4076919998865	704.0386830553839	862.9287990268613	1256.6633665180711	1348.3565073620687	1432.4022831175005	904.9328219818835	912.947893583366	667.3792246823346	1.0630236972918081	1.5799228579549707	1.054930475833285	1.2930111803189652	1.8829824484216295	2.0203753091113557	2.1463093697579647	1.355949943471228	1.3679597143856546	1.0	9.382362966324504	-7.6903542002468805	7.83569367597932	1.6916569597300462	1.2544682106449196	0.20917894801426262	0.35079707654926495	0.36199063575542223	34.64459070132469	0.10661111479819424	0.1374942555120581	2.040073430639351e-08	7.6903542002468805	-0.4371887490851265	
AAAPPQPS(ph)PPPTK	ddPTM_K562_Methotrexat_30min_R1	2	AAAPPQPSPPPTK	13	0	J3KR72;P49848-4;P49848-2;P49848;P49848-3	J3KR72	TAF6	Transcription initiation factor TFIID subunit 6	1	AAAPPQPS(0.706)PPPT(0.294)K;AAAPPQPS(0.974)PPPT(0.026)K	127.57	0.00058433	43973000.0	6827.2	4440.5	8034.5	6233.8	5021.200000000001	4852.6	4376.2	5578.700000000001	5866.9	6658.700000000001	True	False	6527.08446265846	5174.21714940545	6348.168247938953	5687.292432598878	5681.575811237652	5790.296272234669	5357.674249041714	5382.493958962741	5594.149099559509	5452.744905877763	1.1970272909012518	0.9489197163483524	1.1642151535634782	1.04301457903675	1.0419661857119378	1.0619048519935426	0.9825646241522195	0.9871164068505579	1.0259326625621747	1.0	12.412766948530509	-3.0000000000003446	0.2416487822708969	0.9899494196828957	1.8131710089204143	0.3152071579327592	0.06219720935292638	65.73517184414341	0.8806447172270657	0.08097999228255474	21.757684502256645	0.0009999999999992066	3.0000000000003446	0.8232215892375185	
AAARLS(ph)LTDPLVAER	ddPTM_K562_Methotrexat_30min_R1	2	AAARLSLTDPLVAER	15	1	P13224;P13224-2	P13224	GP1BB	Platelet glycoprotein Ib beta chain	1	AAARLS(0.983)LT(0.017)DPLVAER;AAARLS(0.993)LT(0.007)DPLVAER	100.82	0.0040435	346849000.0	11683.0	10718.5	11244.400000000001	12569.8	11228.1	9916.6	10948.5	12496.2	12067.4	13018.0	True	False	11169.429308829205	12489.54994165123	8884.354103817877	11467.825149873486	12704.791955340854	11832.842602572291	13403.979826249535	12056.701563086417	11506.389207933395	10660.314053000839	1.047757997869214	1.171593058099022	0.8334045375817952	1.0757492783850338	1.1917840217628957	1.1099900569290817	1.2573719460428434	1.130989340758915	1.0793668132783	1.0	13.37996232008865	-7.525260119011531	24.885543187022048	1.1397450720445261	1.0199178127023505	0.1941005289985589	0.09962330781230905	103.47922042957875	1081353.8726019533	0.028988937299529522	0.03766580490320462	2.9835950708431034e-08	7.525260119011531	-0.11982725934217564	
AAASPPT(ph)PIR	ddPTM_K562_Methotrexat_30min_R1	1	AAASPPTPIR	10	0	Q6PGN9-4;Q5T2Z1;Q6PGN9-2	Q6PGN9-4	PSRC1		1	AAAS(0.444)PPT(0.556)PIR	121.61	0.0086286	38948000.0	4647.3	4034.2	5729.8	4654.3	4137.6	3950.6	4219.4	4627.9	4196.8	4829.4	True	False	4443.010256519898	4700.78298032462	4527.193282349944	4246.2647452669235	4681.766923559489	4713.997538039458	5165.707857594859	4465.134133881309	4001.691684029274	3954.74886215719	1.1234620481302513	1.1886426026456942	1.1447486149298753	1.0737128685715636	1.183834191940505	1.1919840430697088	1.3062037660659769	1.1290563040824089	1.011869988084775	1.0	11.949370367015227	-9.704177841327558	4.041773377101144	1.0017122556631648	1.1726964724281523	0.5755036010728845	0.05650890572035482	0.160402191949499	5.058879766514667	0.049576999712058034	0.015646689757197595	1.9761602470771584e-10	9.704177841327558	0.17098421676498754	
AAAT(ph)PESQEPQAK	ddPTM_K562_Methotrexat_30min_R1	2	AAATPESQEPQAK	13	0	P49006	P49006	MARCKSL1	MARCKS-related protein	1	AAAT(0.987)PES(0.013)QEPQAK;AAAT(0.915)PES(0.085)QEPQAK	145.52	1.5227999999999999e-21	14722000.0	10119.1	7051.7	13179.7	11144.8	7468.2	6207.6	6884.9	8504.3	9379.0	11264.3	True	False	9674.276480268227	8216.873566594391	10413.461081257203	10167.752687418264	8450.399202080194	7407.13084522193	8429.014084645885	8205.19894871687	8942.972337140345	9224.226116701291	1.0487900402562855	0.8907927302125652	1.1289251748070979	1.1022878839677004	0.9161092860440603	0.8030083772350998	0.913790921645383	0.8895270828043362	0.9695092275489962	1.0	13.171212163376538	-7.84309637597114	7.735423300182821	0.9032624896499305	1.0377236170941622	0.3945764027850487	0.07640592742900076	0.24586404514824126	20.104790446375187	0.02436488700142471	0.02771470440034992	1.4351709136750164e-08	7.84309637597114	0.13446112744423167	
AAAYDIS(ph)EDEED	ddPTM_K562_Methotrexat_30min_R1	2	AAAYDISEDEED	12	0	P49585	P49585	PCYT1A	Choline-phosphate cytidylyltransferase A	1	AAAYDIS(1)EDEED;AAAYDIS(1)EDEED	104.52	0.0043806	34281000.0	7725.1	6774.7	8291.2	7822.4	6616.6	6735.4	5950.1	8134.0	7590.9	8772.7	True	False	7385.51385377356	7894.104024789347	6550.990425952012	7136.622337059493	7486.798875295762	8036.920725386266	7284.561388698666	7847.922609604911	7238.000715854424	7183.879020798936	1.0280676821520582	1.0988637199950264	0.9119015516527255	0.9934218430457105	1.042166614111931	1.1187438850400437	1.0140150422366847	1.0924352410283387	1.0075337703904526	1.0	12.810547339423351	-7.889491264418801	6.033498264574158	1.0534019495561093	1.0079934453985278	0.09468564319454609	0.05515955238475814	0.46024967087445445	22.767977732334355	0.01738870592493254	0.01981213443509057	1.2897595004009016e-08	7.889491264418801	-0.045408504157581575	
AADEEAFEDNSEEYIRR	ddPTM_K562_Methotrexat_30min_R1	2	AADEEAFEDNSEEYIRR	17	1	P55060-4;P55060-3;P55060	P55060-4	CSE1L	Exportin-2	0	;	165.49	3.3559e-08	146455000.0	1973.21	1848.55	2436.7	2209.8999999999996	1935.2	2184.5	1824.9699999999998	1884.99	2004.68	2673.5	False	True	1886.4700510549412	2153.9914675224513	1925.26996947574	2016.1614980910927	2189.7127200484165	2606.6237082587973	2234.2659783085005	1818.6938332774969	1911.4828643585124	2189.303243255319	0.8616759952586152	0.9838707699165685	0.8793984914638948	0.9209146810988237	1.000187035210567	1.1906179357698095	1.0205374633193003	0.8307181012408515	0.8731010061065319	1.0	11.096256082598373	-4.9909811529558405	13.139582372135134	0.9585918347718335	0.6330747656686606	0.0	0.10124297548194962	0.0	0.0	0.0252542080181985	0.0	1.020983790301147e-05	4.9909811529558405	-0.3255170691031729	
AADIS(ph)LDNLVEGK	ddPTM_K562_Methotrexat_30min_R1	1	AADISLDNLVEGK	13	0	A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	AADIS(1)LDNLVEGK	137.39	1.8973e-05	4413300.0	1035.4	799.85	1469.1	1329.7	686.1	677.52	572.7	1180.6	738.2	1208.7	True	False	989.8850557529541	932.0116173746084	1160.75598643937	1213.1272654924326	776.334175912163	808.4411512105747	701.1425534541821	1139.0776288295494	703.8812431258127	989.7927174575291	1.0000932905383082	0.9416230296871223	1.1727263354907203	1.2256376957476316	0.7843401575092662	0.8167782374548175	0.7083731180152549	1.150824418829315	0.7111400505490337	1.0	9.950982617182147	-7.772705757442655	24.999847852804002	0.8595171752538734	1.0810421873558111	0.3599738637014158	0.14568397553524698	248.2441091273958	550846.3973160189	0.04542928814891424	0.05197384013098116	1.6876960834867695e-08	7.772705757442655	0.22152501210193776	
AADPPAENSS(ph)APEAEQGGAE	ddPTM_K562_Methotrexat_30min_R1	2	AADPPAENSSAPEAEQGGAE	20	0	P67809;H0Y449	P67809	YBX1	Nuclease-sensitive element-binding protein 1	1	AADPPAENS(0.109)S(0.891)APEAEQGGAE;AADPPAENS(0.159)S(0.841)APEAEQGGAE	148.41	6.438100000000001e-13	207840000.0	16293.7	14822.2	18968.4	17740.1	15094.1	14534.6	14755.9	16972.3	16233.599999999999	17785.9	True	False	15577.4484575255	17271.31661567784	14987.192058523262	16184.852976282102	17079.23871831479	17343.20574504843	18065.286196114135	16375.374589008788	15478.90347928365	14564.701161105217	1.0695343684170333	1.185833916167164	1.0290078658494073	1.1112382463090607	1.1726460110231856	1.190769762675472	1.2403471925917142	1.1243192982729329	1.0627683539858541	1.0	13.830188480079238	-6.200994169565902	18.945503873630177	1.1318474651334633	1.0695247240158332	0.03878943114560229	0.07282593332833692	7817.227943776706	2448420.592944846	0.018394383978069317	14.295158712506806	6.295146340788991e-07	6.200994169565902	-0.06232274111763014	
AADRLPNLS(ph)SPSAEGPPGPPSGPAPR	ddPTM_K562_Methotrexat_30min_R1	1	AADRLPNLSSPSAEGPPGPPSGPAPR	26	1	O60784-4;O60784;O60784-2;O60784-3	O60784-4	TOM1	Target of Myb protein 1	1	AADRLPNLS(0.623)S(0.375)PS(0.002)AEGPPGPPSGPAPR	111.24	1.9039e-08	81914000.0	1105.2	678.49	1222.3	1029.9	904.06	640.55	980.66	1060.0	928.36	1141.6	True	False	1056.616731329114	790.5989401418992	965.7559337178143	939.6102660229047	1022.9597362995919	764.3272219387374	1200.5979683435971	1022.7191991862811	885.2007462317528	934.8451776698236	1.1302585246926296	0.8457003994100182	1.0330651072352304	1.0050971952007695	1.0942557770361516	0.817597651670926	1.2842746553351045	1.0939984754860592	0.9468955580839455	1.0	9.868583645788156	-8.753014723750745	24.999561637007435	1.089125392533981	0.9889110698742363	0.12211239405787278	0.12223972073295993	379.82747244106616	1127113.17278105	0.0458145513874334	0.0348936835807709	1.7659779482701295e-09	8.753014723750745	-0.10021432265974473	
AADRLPNLSS(ph)PSAEGPPGPPSGPAPR	ddPTM_K562_Methotrexat_30min_R1	1	AADRLPNLSSPSAEGPPGPPSGPAPR	26	1	O60784-4;O60784;O60784-2;O60784-3	O60784-4	TOM1	Target of Myb protein 1	1	AADRLPNLS(0.444)S(0.546)PS(0.01)AEGPPGPPSGPAPR	98.72200000000001	5.675500000000001e-07	99865000.0	875.46	603.34	606.76	660.98	610.42	668.3	601.29	732.3	780.26	847.87	True	False	836.9758266462057	703.0316799734901	479.4093678660074	603.0329096376537	690.7009293984881	797.439516699178	736.1445887313866	706.5445939284086	743.9858829061865	694.3125269717181	1.2054741836456868	1.0125579658483206	0.6904806542335877	0.8685323772967407	0.9947983113757402	1.1485310803439683	1.0602496140205353	1.0176175230627647	1.0715432229793138	1.0	9.439441390936661	-8.00098645576285	23.11950170267697	1.0619456056643826	0.9310940153676466	0.15580931989166125	0.12534906148129676	25.848172689282045	605875.2678320529	0.04216697329826341	0.04712147162944593	9.977311793387484e-09	8.00098645576285	-0.130851590296736	
AADS(ph)DDGAVSAPAASDGGVSK	ddPTM_K562_Methotrexat_30min_R1	3	AADSDDGAVSAPAASDGGVSK	21	0	Q96GM8	Q96GM8	TOE1	Target of EGR1 protein 1	1	AADS(1)DDGAVSAPAASDGGVSK;AADS(1)DDGAVSAPAASDGGVSK;AADS(1)DDGAVSAPAASDGGVSK	342.81	0.0	148730000.0	8988.400000000001	5907.200000000001	11401.1	8209.7	5869.5	5350.4	5190.8	7582.0	7785.6	9290.3	True	False	8593.280698406277	6883.264394768129	9008.164915250085	7489.968347381538	6641.442130179918	6384.289076982312	6354.969035219079	7315.336762481488	7423.649155351302	7607.73664515238	1.1295449749672763	0.904771644422539	1.1840794884757284	0.9845199297420627	0.8729852832657948	0.839183764470916	0.8353297875089354	0.9615654568093904	0.9758025943342324	1.0	12.89325159036257	-7.5286115543569645	7.236181520469707	0.9063219409866445	1.060787658131333	0.4102162011490227	0.08461694678951806	0.12926501012174546	41.88958995367187	0.02460134538415373	0.03309653956248575	2.960659382682098e-08	7.5286115543569645	0.15446571714468837	
AADTEEMDIEMDS(ph)GDEA	ddPTM_K562_Methotrexat_30min_R1	1	AADTEEMDIEMDSGDEA	17	0	Q9UBB5	Q9UBB5	MBD2	Methyl-CpG-binding domain protein 2	1	AADTEEMDIEMDS(1)GDEA	117.02	0.00030437	12423000.0	1331.9	996.51	1499.2	1414.2	1152.5	907.46	921.74	1359.9	1134.5	1297.9	True	False	1273.3512707720301	1161.166339726163	1184.5384077802075	1290.219281687147	1304.0739509383009	1082.813801921047	1128.463658496346	1312.071546201342	1081.7573426256222	1062.8377330918568	1.1980674294163205	1.0925151634843284	1.1145054140431356	1.2139381596227528	1.2269737047674003	1.0187950316470968	1.0617459498860466	1.23449846138267	1.0178010329749276	1.0	10.053705637379363	-8.261630565622953	24.99999918759119	1.0809228665433586	1.1643865737978978	0.3200654716011081	0.07314814144536999	27.668311971582074	3617802.3452754915	0.025709224537879917	0.02408564672302174	5.4748148222968155e-09	8.261630565622953	0.08346370725453922	
AAEAGGAEEQYGFLTT(ph)PTK	ddPTM_K562_Methotrexat_30min_R1	3	AAEAGGAEEQYGFLTTPTK	19	0	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	AAEAGGAEEQYGFLT(0.079)T(0.908)PT(0.013)K;AAEAGGAEEQYGFLT(0.024)T(0.924)PT(0.053)K;AAEAGGAEEQYGFLT(0.2)T(0.8)PTK	152.32	2.1225e-15	75492000.0	8432.099999999999	6280.3	11955.4	9601.8	7183.1	6336.4	5332.41	8644.2	8633.1	10680.3	True	False	8061.434980311457	7318.012828152474	9446.124920207767	8760.025101756213	8127.803554867603	7560.819622344263	6528.338682494527	8340.178586420803	8231.749065333865	8745.994175776996	0.9217288301698735	0.8367273841115199	1.0800515905178465	1.0016042688455107	0.9293172841777622	0.8644894417246234	0.7464375748814798	0.9535998331121528	0.9412022121090144	1.0	13.094406672347107	-8.017501378585594	7.23488987638286	0.8893276838807652	0.960572677318724	0.08766177506602535	0.08538911611568059	0.3787651167783937	99.97504944675326	0.029120737043817072	0.03054266768988455	9.60502769447732e-09	8.017501378585594	0.07124499343795876	
AAEAGGAEEQYGFLTTPT(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	AAEAGGAEEQYGFLTTPTK	19	0	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	AAEAGGAEEQYGFLT(0.274)T(0.221)PT(0.504)K	96.734	0.0021153	30797000.0	2017.8	1449.3	2977.2	1828.4	1549.6	1299.1	1697.8	1971.0	1640.9	2329.6	True	False	1929.0999280454994	1688.7721911121087	2352.3264058452723	1668.1070107741318	1753.3995612789506	1550.1326891274898	2078.574868612729	1901.678812826565	1564.6149171567956	1907.686865714455	1.0112246211450562	0.8852460125732637	1.233077843183815	0.87441342746227	0.9191233597041506	0.8125718727674648	1.0895786441525213	0.9968506084536888	0.8201633849226224	1.0	10.89760866651109														
AAEDDEDDDVDTKK	ddPTM_K562_Methotrexat_30min_R1	1	AAEDDEDDDVDTKK	14	1	B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1	B8ZZQ6	PTMA	Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1	0		122.52	0.0012177	13245000.0	2760.5	1525.1	5557.7	2200.4	1668.0	1521.9	1279.1	2237.9	2616.7	3948.7	False	True	2639.1517253293687	1777.0968527324055	4391.214720464288	2007.4943483413917	1887.3712365857566	1815.9856358887914	1565.9707353295687	2159.1917885462058	2495.0501881432065	3233.5521663146756	0.8161772532456919	0.5495803875518692	1.3580157345873336	0.6208325225905853	0.5836835589811498	0.5616070322930635	0.4842880692147074	0.6677460815506393	0.7716127836548404	1.0	11.65890416997486														
AAEEAFVNDIDESSPGTEWER	ddPTM_K562_Methotrexat_30min_R1	2	AAEEAFVNDIDESSPGTEWER	21	0	P09496-5;P09496-2	P09496-5	CLTA	Clathrin light chain A	0	;	284.74	0.0	0.0	1848.3899999999999	1656.9299999999998	2127.9	2163.9700000000003	1882.44	1356.71	1693.24	1699.78	2181.4	2150.7	False	True	1767.136988799693	1930.7095195055454	1681.2828694740547	1974.2581098801681	2130.0138552748754	1618.8750062860117	2072.992172534939	1639.9977739555243	2079.9871901309243	1761.187389290898	1.0033781751703268	1.0962544538107906	0.9546303134449452	1.120981289035381	1.20941920673897	0.9191952066712304	1.1770423664966068	0.9311886877726464	1.1810141287511624	1.0	10.782332703892468	-4.649961250055141	0.9305076524355594	1.0683191353593133	4.183477908751144e-08	0.027452760864684955	0.10344295017952257	179.6890503450077	10.131936891086415	0.03194134910509907	359.9120094480955	2.2389208974751513e-05	4.649961250055141	-1.0683190935245341	
AAESLTAIPEPAS(ph)PQLLETPIHASQIQK	ddPTM_K562_Methotrexat_30min_R1	3	AAESLTAIPEPASPQLLETPIHASQIQK	28	0	Q14676;Q14676-3;Q14676-2	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	1	AAESLTAIPEPAS(1)PQLLETPIHASQIQK;AAESLTAIPEPAS(1)PQLLETPIHASQIQK;AAESLTAIPEPAS(1)PQLLETPIHASQIQK	124.88	6.134600000000001e-15	71285000.0	6962.4	5291.800000000001	9893.7	7829.0	6112.0	5573.2	5461.5	6590.700000000001	6536.0	9121.3	True	False	6656.341232542371	6166.180004779588	7817.147575410245	7142.643725306652	6915.835130702724	6650.142023743615	6686.3804010651575	6358.901345355677	6232.14278660297	7469.344182795863	0.8911547077819654	0.8255316469392516	1.046564113810082	0.9562611590129024	0.9258958968087136	0.890324754221513	0.895176368558018	0.851333288403302	0.8343627812676595	1.0	12.866765862915795	-8.276455735820281	3.5159672363558516	0.8840587593146261	0.9319106536289866	0.0549257947294407	0.06620231957249834	0.6249924546925453	16.638195087898353	0.02470686243935881	0.022761612288517693	5.291079222204721e-09	8.276455735820281	0.047851894314360544	
AAFTTPDHAPLS(ph)PQSSVASSGSEQTEEQGSSR	ddPTM_K562_Methotrexat_30min_R1	4	AAFTTPDHAPLSPQSSVASSGSEQTEEQGSSR	32	0	M0QZ22;Q5PRF9;A0A087WZT0;M0R0X3	M0QZ22	SAMD4B	Protein Smaug homolog 2	1	AAFTTPDHAPLS(0.992)PQS(0.007)S(0.001)VASSGSEQTEEQGSSR;AAFTTPDHAPLS(0.796)PQS(0.155)S(0.042)VAS(0.006)S(0.001)GSEQTEEQGSSR;AAFTTPDHAPLS(0.912)PQS(0.08)S(0.008)VASSGSEQTEEQGSSR;AAFTTPDHAPLS(0.606)PQS(0.353)S(0.037)VAS(0.002)S(0.001)GSEQTEEQGSSR	104.65	4.3645999999999996e-14	214276000.0	6019.82	5528.34	7428.619999999999	6759.51	5554.669999999999	6157.030000000001	5684.9400000000005	6424.9	6362.07	7350.750000000001	True	False	5755.1959207289465	6441.804219287048	5869.454180098856	6166.914253116309	6285.206466861998	7346.788908427861	6959.932508876927	6198.932625332013	6066.298754339533	6019.457944776151	0.9560987008345929	1.0701635061471642	0.9750801872770833	1.024496609112142	1.0441482479857627	1.22050672599243	1.1562390787889707	1.029815754541755	1.0077815660468286	1.0	12.55541786208013	-8.008036674104348	23.732551506643848	1.094096610810317	1.011962804577831	0.20220860918017847	0.06950052852178461	308.4570924837009	910889.6529851768	0.02324005584139247	0.025177187998494176	9.816650425737783e-09	8.008036674104348	-0.0821338062324859	
AAGALGSASSGS(ph)MPNLAAR	ddPTM_K562_Methotrexat_30min_R1	2	AAGALGSASSGSMPNLAAR	19	0	Q9P2Q2	Q9P2Q2	FRMD4A	FERM domain-containing protein 4A	1	AAGALGS(0.004)AS(0.152)S(0.152)GS(0.691)MPNLAAR;AAGALGSAS(0.039)S(0.037)GS(0.924)MPNLAAR	158.14	1.1263e-14	23011200.0	4180.1	4407.3	4314.3	4400.5	3784.4	4067.7	3861.5	4891.6	4448.799999999999	5281.6	True	False	3996.347809110417	5135.531413708962	3408.787388397912	4014.7149972170055	4282.114932694926	4853.72545574928	4727.5396720155795	4719.559655414729	4241.976259032937	4325.051060249599	0.9240001455334929	1.1873920890572307	0.7881496289667366	0.9282468440928224	0.9900726888638871	1.1222354113593218	1.0930598520477937	1.0912147832868273	0.980792180240326	1.0	12.07850144953493	-8.065602299719133	6.507545589242236	1.064988004174419	0.9609971414507081	0.184537068458551	0.09982634256732321	0.4111714233088974	33.19806449749697	0.03330779285735989	0.03359176899675729	8.598005137483243e-09	8.065602299719133	-0.10399086272371094	
AAGGAPS(ph)PPPPVR	ddPTM_K562_Methotrexat_30min_R1	3	AAGGAPSPPPPVR	13	0	Q4KMP7;Q4KMP7-2	Q4KMP7	TBC1D10B	TBC1 domain family member 10B	1	AAGGAPS(1)PPPPVR;AAGGAPS(1)PPPPVR;AAGGAPS(1)PPPPVR	120.53	0.00054411	76862000.0	4232.5	3710.7000000000003	5326.5	4491.6	3834.6000000000004	4059.2999999999997	3684.8	4476.8	4458.1	4831.8	True	False	4046.444367852402	4323.830103884426	4208.540440929348	4097.828401658878	4338.91711259697	4843.7022746326065	4511.210199001169	4319.348406525603	4250.843904062837	3956.7141989007137	1.022677950552157	1.0927830231169355	1.0636452949011577	1.035664492218662	1.0965960376421533	1.2241728947666535	1.1401405237341908	1.0916503415196477	1.0743368589128426	1.0	11.950087145090281	-7.982378639450588	13.253479305665442	1.119077565090088	1.0583001704680497	0.14511268647129305	0.056054516982518676	1.8828908484046707	1410.2451777195806	0.017621863009084037	0.019898103475199828	1.0414090814357131e-08	7.982378639450588	-0.06077739462203824	
AAGISLIVPGKS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	1	AAGISLIVPGKSPTR	15	1	F2Z357;J3KPC5;P47736;P47736-3;P47736-4	F2Z357	RAP1GAP	Rap1 GTPase-activating protein 1	1	AAGISLIVPGKS(0.639)PT(0.361)R	135.79	1.7290999999999998e-05	67897000.0	4625.7	3569.2	6260.9	5061.0	3589.3	3178.4	3346.3	4350.4	4245.3	5123.6	True	False	4422.35976665679	4158.949633973187	4946.822650260872	4617.309987709413	4061.35586299596	3792.580816813806	4096.792957261619	4197.393966169809	4047.936929615301	4195.6663913009015	1.0540303623343135	0.9912488854204802	1.1790314550550023	1.100495024409645	0.9679882727131464	0.9039281160859609	0.976434390912423	1.0004117522004345	0.9647899885482087	1.0	12.034684254581597	-7.767756491860585	24.804819170583524	0.9660715688995822	1.0817641138607264	0.5463541104203007	0.05007879066656333	108.87438489895383	427506.27517705923	0.016345438582862578	0.018995094122833664	1.7070392545792306e-08	7.767756491860585	0.11569254496114412	
AAGISLIVPGKSPT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	AAGISLIVPGKSPTR	15	1	F2Z357;J3KPC5;P47736;P47736-3;P47736-4	F2Z357	RAP1GAP	Rap1 GTPase-activating protein 1	1	AAGISLIVPGKS(0.37)PT(0.629)R	94.973	0.032639	80532000.0	3603.9	3047.4	4628.7	3913.8	2447.5	2153.4	2260.4	3286.7	3312.5	4274.0	True	False	3445.4768711880142	3550.931053056677	3657.1991249281236	3570.683230566506	2769.3891496064984	2569.514073410158	2767.352239964784	3171.1048980807054	3158.5025980144333	3499.9371840932254	0.9844396313303203	1.01456993833924	1.044932789522519	1.0202135189153716	0.7912682439539269	0.734160054382769	0.790686259325468	0.9060462320561005	0.9024455102707073	1.0	11.773113313859566	-7.752023632813435	24.84538805341965	0.8402355721810699	1.0179979357153095	0.5443712959355225	0.0719020587951781	136.74370250838552	360824.46941118006	0.02227151378642077	0.028360092971303565	1.770012637690887e-08	7.752023632813435	0.17776236353423958	
AAGMT(ph)PLY(ph)AGQRLPQHGYPGPPQAQPLPR	ddPTM_K562_Methotrexat_30min_R1	1	AAGMTPLYAGQRLPQHGYPGPPQAQPLPR	29	1	E7EWM3;A0A087X127;Q8NF64-3;Q8NF64-2;Q8NF64	E7EWM3	ZMIZ2	Zinc finger MIZ domain-containing protein 2	2	AAGMT(1)PLY(0.999)AGQRLPQHGY(0.001)PGPPQAQPLPR	49.266000000000005	0.007861799999999999	33009000.0	300.52	380.16	442.15	450.14	342.28	424.19	243.37	312.98	380.04	588.42	True	False	287.30950063248764	442.9749783848611	349.34875733725886	410.6769250874363	387.29581945957625	506.15871403355425	297.95191764299676	301.97231600124724	362.3720233507638	481.85143609362086	0.5962615841963893	0.9193185807975753	0.7250134194253651	0.852289511507535	0.8037660375143657	1.0504455857535528	0.6183480951276162	0.6266917422709015	0.7520409740573173	1.0	8.912444594634609	-11.896308617972203	15.458531392090617	0.9999999999968819	0.7773058695396612	0.20125995054447332	0.13608733949245663	0.0	0.0	0.1330101556271497	0.03225970123121069	1.2696715316587692e-12	11.896308617972203	-0.22269413045722075	
AAGPAS(ph)PPEEDPER	ddPTM_K562_Methotrexat_30min_R1	1	AAGPASPPEEDPER	14	0	Q96KM6	Q96KM6	ZNF512B	Zinc finger protein 512B	1	AAGPAS(1)PPEEDPER	102.5	0.0031886999999999996	10162000.0	1091.4	977.44	1382.8	947.85	1011.8	1160.6	762.33	961.97	853.42	1147.6	True	False	1043.4233628054606	1138.9453463607392	1092.5691770800895	864.753462132062	1144.8694347586745	1384.8695242870954	933.3019081102257	928.1369698502136	813.7446904747102	939.7585195286348	1.1103100861791837	1.2119553296861973	1.1626063019126462	0.9201868822277941	1.218259170805836	1.4736440218511877	0.9931294994573205	0.9876334723900664	0.8659082876767845	1.0	9.876146279081057	-8.972969818970729	24.99969072315608	0.954138547661736	1.1779444841561693	0.4073233574478927	0.13133112453543958	231.8654652255109	214447.58655055193	0.05814835083142033	0.039202605094093214	1.0642169727618924e-09	8.972969818970729	0.22380593649443326	
AAGSPS(ph)PLPAPDPAPK	ddPTM_K562_Methotrexat_30min_R1	1	AAGSPSPLPAPDPAPK	16	0	J3KRF7;J3KRY8;Q9BZE9-3;Q9BZE9;Q9BZE9-2	J3KRF7	ASPSCR1	Tether containing UBX domain for GLUT4	1	AAGS(0.403)PS(0.597)PLPAPDPAPK	76.01	0.030400999999999997	16915000.0	2257.1	1536.8	2849.2	2453.1	1438.9	1403.1	1394.7	1827.3	1745.5	2103.7	True	False	2157.8805865752292	1790.7300788664108	2251.191856621777	2238.040531683453	1628.1405709371975	1674.2292172386888	1707.4969780034007	1763.0328232764994	1664.352085987681	1722.6995447302106	1.252615752512532	1.039490655433391	1.306781477657111	1.2991473403064893	0.9451100024480347	0.9718637369819978	0.9911751490424926	1.0234128340427495	0.9661302175872651	1.0	10.7504553883574	-7.7679372543839085	24.99988376430085	0.9839763525163102	1.2171698508418414	0.7311382988036346	0.07170531866548499	85.14531391397949	327586.9416192852	0.02287117164825767	0.02654552083729824	1.706328896680549e-08	7.7679372543839085	0.23319349832553116	
AAHSEGNTTAGLDMR	ddPTM_K562_Methotrexat_30min_R1	4	AAHSEGNTTAGLDMR	15	0	P78371-2;P78371	P78371-2	CCT2	T-complex protein 1 subunit beta	0	;;;	129.34	0.00063767	27594300.0	3927.4399999999996	3617.3399999999997	5149.33	4408.46	3571.3900000000003	3853.76	3574.1299999999997	4850.880000000001	4832.38	4720.23	False	True	3754.794440183873	4215.043950733096	4068.556002758043	4021.977156375702	4041.090384070748	4598.44457859438	4375.719634323721	4680.271800895043	4607.723708556377	3865.3506070361163	0.9713981529512492	1.090468725672758	1.0525710126662329	1.0405206578297135	1.0454654169571918	1.1896578204895072	1.1320369299381479	1.2108272383818228	1.1920584125457894	1.0	11.916383564553847	-8.249919997880959	23.4308341809434	1.157287833875087	1.0436017749499114	0.41216778368788454	0.06164709075249857	283.3227145468377	576288.2245187759	0.019266001139360594	0.019076798037360572	5.624449245761865e-09	8.249919997880959	-0.11368605892517558	
AAHTEDINACTLT(ph)TSPR	ddPTM_K562_Methotrexat_30min_R1	1	AAHTEDINACTLTTSPR	17	0	H7C155;P04049;P04049-2	H7C155	RAF1	RAF proto-oncogene serine/threonine-protein kinase	1	AAHTEDINACT(0.156)LT(0.42)T(0.212)S(0.212)PR	166.38	6.792399999999999e-08	45143000.0	1870.8	1894.7	2281.6	1526.0	1706.5	1577.0	1528.3	1901.7	1739.7	1760.8	True	False	1788.561872032669	2207.7669706065767	1802.7233399088316	1392.2179492678445	1930.9346614110273	1881.7329310707821	1871.0601788790407	1834.8161331061797	1658.821726721724	1441.9020574991457	1.2404184200518964	1.5311490535187648	1.2502397999455657	0.9655426608396176	1.3391579902174953	1.3050351938150953	1.2976333372630264	1.2724970628646646	1.1504399470785185	1.0	10.49375745620395	-15.854171244601979	0.17273477256153716	1.6627415043883934e-15	1.3270603104082586	0.2833815608478235	0.13224107469719093	180.0422073368387	1.7876533179960254	61.69598980700628	0.49086634981240895	1.3990355667058922e-16	15.854171244601979	1.327060310408257	
AAHVPENS(ph)DTEQDVLTVKPVR	ddPTM_K562_Methotrexat_30min_R1	4	AAHVPENSDTEQDVLTVKPVR	21	1	H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99	H3BSS6	ZNF106	Zinc finger protein 106	1	AAHVPENS(0.971)DT(0.029)EQDVLTVKPVR;AAHVPENS(0.991)DT(0.009)EQDVLTVKPVR;AAHVPENS(0.911)DT(0.089)EQDVLTVKPVR;AAHVPENS(0.998)DT(0.002)EQDVLTVKPVR	148.2	1.5434e-16	113963100.0	8906.5	6496.4	13362.2	9567.7	7807.25	6835.820000000001	5900.06	7986.48	8291.1	10840.600000000002	True	False	8514.980924341984	7569.819680080522	10557.656825267262	8728.91459581255	8834.040219924556	8156.745469164412	7223.298644897641	7705.590971620041	7905.648570686033	8877.262292438236	0.9591899668882322	0.8527200651183405	1.1892919773543706	0.9832890263080263	0.9951311484228086	0.9188356951120427	0.8136853916156717	0.8680143402075391	0.8905502969558716	1.0	13.115899109200143	-8.363761343693842	3.610428343782932	0.8805259420908979	0.9984358407412701	0.22984631875088235	0.08870827756268118	0.34128492472980204	8.219972909240374	0.033323994115054933	0.029126029010999255	4.327515741434924e-09	8.363761343693842	0.11790989865037227	
AAIAPFQSAGS(ph)PPELQGLPELHEECEGNHPSAR	ddPTM_K562_Methotrexat_30min_R1	1	AAIAPFQSAGSPPELQGLPELHEECEGNHPSAR	33	0	Q7Z628-2;Q7Z628	Q7Z628-2	NET1	Neuroepithelial cell-transforming gene 1 protein	1	AAIAPFQS(0.442)AGS(0.557)PPELQGLPELHEECEGNHPS(0.001)AR	40.8	0.026267000000000002	12499000.0	784.75	637.05	767.59	863.08	745.38	670.54	701.26	812.63	856.1	757.73	True	False	750.2533296331185	742.3116845014623	606.4833487379996	787.4151164181461	843.410534967801	800.1123649969574	858.5354060333152	784.0493422969311	816.3000978596705	620.497754446177	1.2091153017995275	1.1963164720297979	0.9774142523357139	1.2690055858799207	1.359248327531151	1.2894685907624188	1.383623711579098	1.2635812727424476	1.3155568928500894	1.0	9.277282179090507	-7.490069470570976	24.226790725867772	1.2908801911032066	1.132606132841367	0.22510828446557984	0.11542971517018723	545.8421005978222	403056.49297606817	0.030713076646202347	0.04550802904033645	3.235418984128775e-08	7.490069470570976	-0.1582740582618396	
AAIIVTQLT(ph)TPY(ph)IRIAPAAGDGQLTGAAT(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	AAIIVTQLTTPYIRIAPAAGDGQLTGAATPK	31	1	J3KRV2	J3KRV2	PTPRM		3	AAIIVT(0.152)QLT(0.513)T(0.513)PY(0.822)IRIAPAAGDGQLT(0.067)GAAT(0.934)PK	42.321000000000005	0.012190000000000001	12164000.0	762.07	668.69	376.09	807.6	833.22	707.82	822.22	898.57	639.51	895.24	True	False	728.5703152768532	779.1796567134172	297.153848573945	736.7989618798894	942.8030346210942	844.5961973814332	1006.6237651494624	866.966783785676	609.7793196848937	733.103360947033	0.9938166349908368	1.0628510224081666	0.40533690664039185	1.0050410366801241	1.2860438034319857	1.1520833791982241	1.3730993728484506	1.1825982937327095	0.8317780986533364	1.0	9.517872809434008	-7.519708203388128	24.900343302658587	1.1579852532902715	0.8216035592823645	0.30395176470663376	0.21349935985439078	141.5377527649504	1111593.7785435268	0.06348834887363981	0.08366390554601606	3.0219814670835935e-08	7.519708203388128	-0.33638169400790696	
AAIPPPVYEEQDRPRS(ph)PTGPSNSFLANMGGTVAHK	ddPTM_K562_Methotrexat_30min_R1	1	AAIPPPVYEEQDRPRSPTGPSNSFLANMGGTVAHK	35	2	H0Y6J6;Q5W012;Q96I25	H0Y6J6	RBM17	Splicing factor 45	1	AAIPPPVY(0.002)EEQDRPRS(0.221)PT(0.221)GPS(0.221)NS(0.221)FLANMGGT(0.112)VAHK	52.92	0.0016351	199700000.0	1701.8	1033.9	1855.3	1916.8	1146.7	1200.1	1095.5	1719.0	1704.2	2752.0	True	False	1626.9909096777835	1204.7344017048295	1465.8978841746393	1748.7571200239877	1297.5111492763117	1432.0023402524055	1341.1937616711296	1658.5417956615256	1624.9721139731926	2253.5861325747674	0.7219563903771957	0.534585469927611	0.6504734223314649	0.7759885875877296	0.5757539641024855	0.6354327085853666	0.5951375642069596	0.7359566921751548	0.7210605756242515	1.0	11.138006875901853	-10.360310538901912	1.0530769738323684	0.9996580794896699	0.6414631602146784	0.6994440436310438	0.06893799805443089	0.6686392867796586	1.2595004442686049	0.06572611877101704	0.020897387630468025	4.362038165444156e-11	10.360310538901912	-0.3581949192749915	
AAISQLRS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	AAISQLRSPR	10	1	C9JIG9;O95747	C9JIG9	OXSR1	Serine/threonine-protein kinase OSR1	1	AAISQLRS(1)PR	84.821	0.015812	10295000.0	2327.5	2396.7	2557.2	2223.6	2120.3	1888.6	1592.2	2359.6	2104.9	2547.4	True	False	2225.1858868698096	2792.7139380655426	2020.4786662056745	2028.660440361717	2399.156614468095	2253.545221065489	1949.291380495458	2276.6115305659882	2007.0436584333822	2086.0411751893034	1.0667027637495599	1.3387626146986817	0.9685708461734082	0.972492999893744	1.1501003158532463	1.0802975741171479	0.9344453041865601	1.0913550305925246	0.9621304134858448	1.0	11.026551919343902	-6.778153384857285	24.99998855111915	1.0252452998314157	1.2027327676873478	0.4030492984185978	0.08880238455382479	201.28267657883922	301069.15551831725	0.022436797054079975	0.046903488117434305	1.6666584753414818e-07	6.778153384857285	0.17748746785593217	
AAKLS(ph)EGSQPAEEEEDQETPSR	ddPTM_K562_Methotrexat_30min_R1	3	AAKLSEGSQPAEEEEDQETPSR	22	1	S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5	S4R3H4	ACIN1	Apoptotic chromatin condensation inducer in the nucleus	1	AAKLS(0.903)EGS(0.097)QPAEEEEDQETPSR;AAKLS(0.529)EGS(0.471)QPAEEEEDQETPSR;AAKLS(0.945)EGS(0.055)QPAEEEEDQETPSR	138.28	5.7807e-13	96468000.0	4010.98	3196.26	5586.2	4438.4	2924.98	2745.25	2976.76	3510.92	3836.63	5313.1	True	False	3834.6621218118426	3724.38763786931	4413.73295993983	4049.292363060553	3309.6661388420903	3275.7307095891338	3644.3742053785045	3387.438953591601	3658.2659087155066	4350.846105008354	0.8813600916377343	0.8560145654386823	1.014453936869678	0.930690781822718	0.7606948301463159	0.7528950991436743	0.837624249955287	0.7785701612594953	0.8408171239392717	1.0	12.087080272474143	-7.7459827107813055	24.990831837679988	0.8140446958416641	0.9227162231030537	0.24705455030403134	0.0763772935103352	288.1696452873971	465919.9178330859	0.022005835448506237	0.028306332639698274	1.7948050764159666e-08	7.7459827107813055	0.10867152726138962	
AAKLSEGS(ph)QPAEEEEDQETPSR	ddPTM_K562_Methotrexat_30min_R1	1	AAKLSEGSQPAEEEEDQETPSR	22	1	S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5	S4R3H4	ACIN1	Apoptotic chromatin condensation inducer in the nucleus	1	AAKLS(0.135)EGS(0.865)QPAEEEEDQETPSR	107.95	2.4771e-05	28508000.0	3410.8	2415.3	4438.5	3693.3	2117.2	1970.5	1714.5	2879.9	2776.3	4030.1	True	False	3260.8653159766022	2814.3872719196006	3506.919505691336	3369.514123218173	2395.6489101315137	2351.271236953059	2099.020268722183	2778.612284657142	2647.2304189788615	3300.2098375325477	0.9880781757849186	0.8527904013593937	1.062635310581747	1.0209999633651907	0.7259080567806129	0.7124611320809294	0.6360263050096074	0.841950185426577	0.802140030270955	1.0	11.688342043055327	-7.761741783762562	24.999999476005392	0.7672947234454693	0.9777812521210537	0.45180446208435476	0.1037724443581003	7.010625421620527	579592.0849172781	0.03138726626554772	0.037857550669297274	1.7308451530469984e-08	7.761741783762562	0.21048652867558437	
AAKPGPAEAPS(ph)PT(ph)ASPSGDASPPATAPYDPR	ddPTM_K562_Methotrexat_30min_R1	2	AAKPGPAEAPSPTASPSGDASPPATAPYDPR	31	1	Q9UPT8;M0QY97	Q9UPT8	ZC3H4	Zinc finger CCCH domain-containing protein 4	2	AAKPGPAEAPS(0.95)PT(0.43)AS(0.148)PS(0.193)GDAS(0.26)PPAT(0.017)APY(0.001)DPR;AAKPGPAEAPS(0.584)PT(0.531)AS(0.227)PS(0.303)GDAS(0.252)PPAT(0.064)APY(0.039)DPR	69.578	8.7515e-05	75943000.0	3460.9	2383.29	4420.0	3588.7000000000003	2246.32	2568.0	2315.77	2805.0	3360.6000000000004	4118.0	True	False	3308.7629799646484	2777.0881634965695	3492.302402873876	3274.0842428161964	2541.7504533377214	3064.229655668843	2835.140371944458	2706.346560110865	3204.366439513151	3372.190295764132	0.9811910627110351	0.8235265272499358	1.0356184249923912	0.97090732006697	0.7537387366692975	0.9086763755645333	0.8407415131660061	0.8025485879341848	0.9502329816731317	1.0	11.71947023583201	-6.219157743494325	21.685801482681807	0.8928188369054798	0.9811925838365275	0.07132450439832039	0.08748179694346198	12256.708785567094	6285584.140150399	0.021872886322013774	5.9106902826205046	6.037293043065e-07	6.219157743494325	0.08837374693104771	
AAKPGPAEAPSPT(ph)AS(ph)PSGDASPPATAPYDPR	ddPTM_K562_Methotrexat_30min_R1	2	AAKPGPAEAPSPTASPSGDASPPATAPYDPR	31	1	Q9UPT8;M0QY97	Q9UPT8	ZC3H4	Zinc finger CCCH domain-containing protein 4	2	AAKPGPAEAPS(0.094)PT(0.8)AS(0.477)PS(0.396)GDAS(0.215)PPAT(0.014)APY(0.004)DPR;AAKPGPAEAPS(0.032)PT(0.639)AS(0.636)PS(0.571)GDAS(0.079)PPAT(0.032)APY(0.011)DPR	72.76899999999999	5.9037e-06	83150000.0	5820.1	4323.6	8066.6	6836.7	4103.9	4460.97	4000.2	4747.4	5979.299999999999	6980.900000000001	True	False	5564.25537279097	5038.0014113657	6373.530896611408	6237.337125661514	4643.63478286828	5322.989317386701	4897.346677715066	4580.431251148062	5701.323648092895	5716.591363695931	0.9733519537757424	0.8812946546013909	1.1149180501316693	1.0910937530488285	0.8123083298131781	0.9311474231289543	0.8566900039097423	0.8012521727959735	0.9973292273958926	1.0	12.480939451155598	-7.761836398140958	24.99999930126206	0.8892635571172084	1.012727705282226	0.29189436287467785	0.08708237282306276	13.434452981342982	845983.6755776487	0.02688951520974588	0.032415798522296355	1.7304681162485135e-08	7.761836398140958	0.12346414816501772	
AAKPGPAEAPSPT(ph)ASPSGDASPPATAPYDPR	ddPTM_K562_Methotrexat_30min_R1	1	AAKPGPAEAPSPTASPSGDASPPATAPYDPR	31	1	Q9UPT8;M0QY97	Q9UPT8	ZC3H4	Zinc finger CCCH domain-containing protein 4	1	AAKPGPAEAPS(0.174)PT(0.732)AS(0.083)PS(0.01)GDASPPATAPYDPR	90.899	4.264e-06	202060000.0	2070.7	1340.7	2924.3	2335.8	1343.5	1420.9	1657.0	2096.3	2049.8	2724.7	True	False	1979.674507386171	1562.227886996483	2310.529392923999	2131.024040563454	1520.1937987727606	1695.4688153192603	2028.624430021965	2022.571940805849	1954.5052454067893	2231.2304271171765	0.8872568621000637	0.7001642985905911	1.0355404645092077	0.9550891806888845	0.6813253262850585	0.7598806446494467	0.9091953952255012	0.9064827712210248	0.8759764216428667	1.0	11.123623798196054	-10.170068789997417	0.9158142233241058	0.9973636099836111	0.8443231823638275	0.1543525193251406	0.10537294993616428	1.6187628975806208	2.862509310665313	0.1070570596075046	0.03646671814003853	6.759758958296795e-11	10.170068789997417	-0.15304042761978354	
AAKPGPAEAPSPTASPS(ph)GDASPPATAPYDPR	ddPTM_K562_Methotrexat_30min_R1	1	AAKPGPAEAPSPTASPSGDASPPATAPYDPR	31	1	Q9UPT8;M0QY97	Q9UPT8	ZC3H4	Zinc finger CCCH domain-containing protein 4	1	AAKPGPAEAPSPT(0.004)AS(0.113)PS(0.52)GDAS(0.286)PPAT(0.061)APY(0.015)DPR	91.615	4.975899999999999e-07	37234000.0	2179.5	1792.8	3171.5	2685.8	1623.0	1617.6	1671.0	2095.2	2017.5	2898.2	True	False	2083.6917896596133	2089.0297276104234	2505.845491111877	2450.3400839735095	1836.452947828948	1930.1783064680392	2045.7642864011484	2021.5106284293342	1923.706865356716	2373.3078958678034	0.877969433838549	0.8802185891041191	1.055845090927661	1.032457730511843	0.773794647979059	0.813286093148174	0.8619885729799553	0.8517692255391777	0.8105593331173365	1.0	11.21268356219635	-7.761629031960546	24.99999981384694	0.8430618776491985	0.9625382979224718	0.3238972351453261	0.07702462063501855	5.8971830957812434	777409.4306382245	0.02393504918221388	0.02889400578398648	1.731294574473222e-08	7.761629031960546	0.11947642027327332	
AAKPGPAEAPSPTASPSGDAS(ph)PPATAPYDPR	ddPTM_K562_Methotrexat_30min_R1	1	AAKPGPAEAPSPTASPSGDASPPATAPYDPR	31	1	Q9UPT8;M0QY97	Q9UPT8	ZC3H4	Zinc finger CCCH domain-containing protein 4	1	AAKPGPAEAPSPTASPS(0.005)GDAS(0.672)PPAT(0.323)APYDPR	120.99	7.7326e-21	26804000.0	3685.5	2827.2	4933.1	4324.2	2833.2	2670.3	2305.3	3352.8	3572.4	4034.2	True	False	3523.489832893096	3294.3467458167065	3897.7097248002524	3945.1040997536097	3205.815460128756	3186.297682839763	2822.32220792374	3234.880123614868	3406.319903742421	3303.5672878027367	1.0665712322259473	0.9972089135220361	1.1798487468958716	1.194195170269279	0.9704102204804803	0.9645021291390218	0.854325631066809	0.9792081836984304	1.0311035335405645	1.0	11.68980901481414	-7.854792537290598	8.264330655567608	0.9589158627800206	1.106191408888758	0.5198339867829811	0.06704661380057325	0.21850055052419995	17.102698246693105	0.02253344827709303	0.02560172342699015	1.3970355663283489e-08	7.854792537290598	0.1472755461087375	
AALAPAKES(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	AALAPAKESPR	11	1	Q13428;Q13428-3;Q13428-4;E7ETY2;Q13428-6;Q13428-7;Q13428-2;Q13428-8;A0A6I8PRA0;A0A3B3IS06;H0Y8Y7;Q13428-5;H0YAB7	Q13428	TCOF1	Treacle protein	1	AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR	146.67	3.3676e-07	783720000.0	23018.5	17639.8	31442.4	23000.3	18742.4	17936.1	16434.0	23821.7	23758.3	27971.9	True	False	22006.63430157368	20554.477124666635	24843.069925819378	20983.899409269474	21207.354115458566	21401.99747937772	20119.74283825043	22983.877308731902	22653.781818688705	22905.917856747143	0.9607401213608835	0.8973435272584867	1.0845699387026149	0.9160907473999553	0.9258460738438277	0.9343435881166215	0.8783644019016675	1.0034034633526723	0.9889925372283579	1.0	14.48343275340063														
AALGLQDS(ph)DDEDAAVDIDEQIESMFNSK	ddPTM_K562_Methotrexat_30min_R1	1	AALGLQDSDDEDAAVDIDEQIESMFNSK	28	0	A0A0C4DG89;Q7L014	A0A0C4DG89	DDX46	Probable ATP-dependent RNA helicase DDX46	1	AALGLQDS(1)DDEDAAVDIDEQIESMFNSK	76.937	0.00041937	0.0	0.0	0.0	173.39	165.11	0.0	75.431	0.0	0.0	0.0	158.88	True	False	0.0	0.0	136.99780851454784	150.63506264981248	0.0	90.0069731918834	0.0	0.0	0.0	130.10529242132233	0.0	0.0	1.0529764467298175	1.157793505909108	0.0	0.6918010137543997	0.0	0.0	0.0	1.0	7.023535838953404	-13.24140847692516	2.3242789821396497	3.3970526340204494	0.34147894060069384	0.17043084322842572	0.44665098153539357	28759131.97427422	4597041.921655274	362897576.4516079	0.11933111220727542	5.735767291796011e-14	13.24140847692516	-3.0555736934197557	
AALPSLTNPPS(ph)LSPIR	ddPTM_K562_Methotrexat_30min_R1	2	AALPSLTNPPSLSPIR	16	0	P42858	P42858	HTT	Huntingtin	1	AALPSLTNPPS(0.5)LS(0.5)PIR;AALPSLTNPPS(0.5)LS(0.5)PIR	106.76	0.0011449000000000001	20310000.0	3052.8	2454.26	3001.8999999999996	2907.9	3025.7	2495.8999999999996	2511.96	3197.1000000000004	2878.4	3339.4	True	False	2918.6025673195077	2859.784749712829	2371.842213390745	2652.9689218060057	3423.632584255112	2978.197351084062	3075.3309735896055	3084.6561808664715	2744.5838122640735	2734.6023005523903	1.0672859328502537	1.0457772046542753	0.8673444811011943	0.9701479887112306	1.251967272741465	1.0890787850512909	1.1245989857349232	1.12800906378356	1.0036500780057367	1.0	11.417115318506116														
AALSRDEILRY(ph)SR	ddPTM_K562_Methotrexat_30min_R1	2	AALSRDEILRYSR	13	2	O95396	O95396	MOCS3	Adenylyltransferase and sulfurtransferase MOCS3;Molybdopterin-synthase adenylyltransferase;Molybdopterin-synthase sulfurtransferase	1	AALSRDEILRY(0.821)S(0.179)R;AALSRDEILRY(0.844)S(0.156)R	84.352	0.021127	47009000.0	3502.6000000000004	3146.5	3533.9	4053.6	3079.3	3595.3999999999996	3449.5	3580.2	3852.3	3369.2	True	False	3348.6298978948203	3666.40564364469	2792.1826836009054	3698.2271816200105	3484.2819237521135	4290.1601651058245	4223.138184285318	3454.282336723323	3673.2074138357743	2759.005231784487	1.213709151152632	1.3288868036228074	1.012025150019364	1.3404205033812304	1.26287615681632	1.554966302956594	1.5306742211408746	1.2520028222234072	1.3313521016631034	1.0	11.429932477077223	-6.251329834267458	21.716795280621064	1.3060180383497058	1.2137088383119776	0.010172613203066283	0.17310450391481597	1162.620938169227	2497135.7634086227	0.044134224527782234	0.5123838493402799	5.606220378672423e-07	6.251329834267458	-0.09230920003772813	
AANQVEETLHTHLPQT(ph)PETNFR	ddPTM_K562_Methotrexat_30min_R1	3	AANQVEETLHTHLPQTPETNFR	22	0	Q5VZL5-2;Q5VZL5-4;Q5VZL5	Q5VZL5-2	ZMYM4	Zinc finger MYM-type protein 4	1	AANQVEETLHTHLPQT(0.96)PET(0.039)NFR;AANQVEETLHT(0.003)HLPQT(0.648)PET(0.349)NFR;AANQVEETLHT(0.002)HLPQT(0.972)PET(0.026)NFR	115.74	2.3341e-05	56278600.0	4534.37	3972.63	3867.76	4069.75	3794.1	4334.12	3846.44	4779.6900000000005	5254.29	5871.4	True	False	4335.044524101337	4629.039584335676	3055.9700320677534	3712.9613361945026	4293.090652715842	5171.627350166452	4709.102083653403	4611.585593545916	5010.019204746041	4808.032564970745	0.9016254498117597	0.9627720947775741	0.635596783252309	0.7722413036978036	0.8928996621182337	1.0756223632603286	0.979423916127751	0.9591419216134148	1.0420102478604	1.0	12.231230952167653	-8.034851653866683	4.950401146778064	1.0058411229903965	0.8163994078407285	0.535233720642049	0.08518773501072018	0.17273332397093616	10.600808420103196	0.030140255312816472	0.031357316307828974	9.228866125567605e-09	8.034851653866683	-0.189441715149668	
AAPEAS(ph)SPPAS(ph)PLQHLLPGK	ddPTM_K562_Methotrexat_30min_R1	1	AAPEASSPPASPLQHLLPGK	20	0	Q96TA1-2;Q96TA1	Q96TA1-2	FAM129B	Niban-like protein 1	2	AAPEAS(0.5)S(0.5)PPAS(1)PLQHLLPGK	100.39	0.00074537	25837000.0	6665.9	4856.0	9031.6	7110.9	4838.8	4203.1	4222.2	5818.7	5795.4	8225.9	True	False	6372.8750175232935	5658.371462113017	7135.990584116678	6487.4984373844745	5475.187014143387	5015.289589463289	5169.1358288706915	5614.0530229294445	5525.973118953314	6736.109799399265	0.9460764754891071	0.8400058239278756	1.0593637569199177	0.9630927390707078	0.8128114263564515	0.7445379809442179	0.7673770147469511	0.833426590438017	0.8203508083324484	1.0	12.717699939360603	-7.76398767949752	24.980342970217922	0.8140426344290748	0.9517847259490213	0.3422636414393214	0.0813842705441327	67.56804065464908	662353.0876589637	0.02447730209622236	0.029051446940195423	1.7219174233777083e-08	7.76398767949752	0.13774209151994654	
AAPEAS(ph)SPPASPLQHLLPGK	ddPTM_K562_Methotrexat_30min_R1	2	AAPEASSPPASPLQHLLPGK	20	0	Q96TA1-2;Q96TA1	Q96TA1-2	FAM129B	Niban-like protein 1	1	AAPEAS(0.827)S(0.173)PPASPLQHLLPGK;AAPEAS(0.851)S(0.149)PPASPLQHLLPGK	105.57	0.00015391	173690000.0	7170.2	5771.2	11107.7	8438.900000000001	6281.7	5258.7	5349.5	7040.7	7110.200000000001	9089.7	True	False	6855.006593355062	6724.792706372874	8776.345565701851	7699.0747392374915	7107.853655192296	6274.869349791959	6549.261550031688	6793.074590293248	6779.648353932751	7443.46724900613	0.9209426687905907	0.903448954822873	1.1790668611961301	1.0343398421300893	0.9549116584265691	0.8430035546444831	0.8798670472965621	0.9126223523318754	0.910818591273843	1.0	12.861759085797784	-7.983125461315384	5.212038783524934	0.9013648749317685	1.0127725362263222	0.2598764810337665	0.07897348204037816	0.2403354225500347	19.093859703151843	0.026695655028567244	0.029412972720596293	1.039619791512208e-08	7.983125461315384	0.1114076612945537	
AAPPCPPCQS(ph)PVPQRR	ddPTM_K562_Methotrexat_30min_R1	2	AAPPCPPCQSPVPQRR	16	1	A7MCY6	A7MCY6	TBKBP1	TANK-binding kinase 1-binding protein 1	1	AAPPCPPCQS(1)PVPQRR;AAPPCPPCQS(1)PVPQRR	123.63	0.00019063	25449000.0	864.1700000000001	1129.12	1400.6799999999998	1307.77	1049.42	1003.8	1070.84	965.53	1137.87	1592.77	True	False	826.1821215279414	1315.6878882415676	1106.6964094247471	1193.1198345439109	1187.4371241593678	1197.7701434425173	1311.003128934654	931.5717626323864	1084.970672061188	1304.3039187431373	0.6334276157999073	1.0087280037534505	0.8484958095435226	0.9147559992717292	0.9103991079806113	0.9183213561120948	1.0051362340442649	0.7142290606088758	0.8318388501866154	1.0	10.349064358967336	-6.245931264074221	24.622851222988103	0.8989703363724684	0.6334273752859325	0.46781818300236244	0.08686936419344839	2274.3258419940744	3610969.04465746	0.021647218968663416	0.5144897781883594	5.676344379824815e-07	6.245931264074221	-0.26554296108653586	
AAPPPPPPPPPLES(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	7	AAPPPPPPPPPLESSPR	17	0	Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5	Q5T4S7-3	UBR4	E3 ubiquitin-protein ligase UBR4	1	AAPPPPPPPPPLES(0.5)S(0.5)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR;AAPPPPPPPPPLES(0.775)S(0.225)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR	161.94	5.4697000000000005e-22	714129100.0	1716.481	1263.0780000000002	2093.82	2219.98	1486.35	1605.807	1535.859	2047.01	2090.77	1700.6000000000004	True	False	1641.0265504963158	1471.7801708448908	1654.3557957432981	2025.3578001413046	1681.8310776374353	1916.1064761217372	1880.314477048343	1975.0154980436864	1993.5705590492505	1392.6048608490737	1.1783863439165212	1.0568541100363127	1.1879577920865754	1.4543664589153023	1.2076872089991268	1.375915401410766	1.3502139263695458	1.418216720024599	1.4315407156009543	1.0	10.443570248874538	-7.050724042683803	6.522922369132676	1.3356459579022304	1.1181672165689305	0.2890814197996101	0.12977377046629013	0.2239399688470454	22.82137747490717	0.032909480602543326	0.05876115727205668	8.897663093129897e-08	7.050724042683803	-0.21747874133329992	
AAPQS(ph)PSVPK	ddPTM_K562_Methotrexat_30min_R1	2	AAPQSPSVPK	10	0	E9PF10;O75694-2;O75694	E9PF10	NUP155	Nuclear pore complex protein Nup155	1	AAPQS(0.776)PS(0.224)VPK;AAPQS(0.997)PS(0.003)VPK	160.72	2.2662e-06	144929000.0	11145.1	8392.3	13713.5	10141.3	7380.0	7123.6	6475.3	8986.6	9749.7	11575.2	True	False	10655.17474876593	9778.98493029059	10835.223756065821	9252.227974383997	8350.599356116836	8500.134881278265	7927.550858009188	8670.536184346627	9296.43857505248	9478.819114018695	1.1241036062189924	1.0316670054213783	1.1430984836540525	0.9760950033006135	0.8809746504991028	0.8967504051962543	0.8363437220027482	0.9147274655260951	0.9807591497661893	1.0	13.210491621795445	-7.464085632291073	4.204761178785825	0.9095947051666802	1.0915967539767029	0.704734471150889	0.052137191928552026	0.11735356714346958	4.1784639382399815	0.015066996261300545	0.02222899920222754	3.4349021332070825e-08	7.464085632291073	0.1820020488100227	
AAPQSPS(ph)VPK	ddPTM_K562_Methotrexat_30min_R1	1	AAPQSPSVPK	10	0	E9PF10;O75694-2;O75694	E9PF10	NUP155	Nuclear pore complex protein Nup155	1	AAPQS(0.018)PS(0.982)VPK	105.13	0.0041014	20698000.0	1460.8	1347.8	2300.7	2041.3	1220.5	1220.3	1187.5	1602.6	1384.2	1757.9	True	False	1396.5849811125322	1570.501041317119	1817.8145109257753	1862.3423983227067	1381.0171428374797	1456.1057043663116	1453.8271035914802	1546.2356496376724	1319.84884412727	1439.5272756007214	0.9701691692710239	1.090983872231071	1.2627857364961652	1.2937180350025272	0.959354620259748	1.011516578425839	1.009933697147066	1.074127372121116	0.9168626857566773	1.0	10.491379409444711	-7.785748988237943	24.99916627662437	1.000548096526762	1.1576243694712096	0.42041060433246347	0.09136937840282108	245.5825305238116	252547.23463371323	0.030418194223524323	0.03450735160548419	1.637762835444833e-08	7.785748988237943	0.1570762729444477	
AAPRPAPVAQPPAAAPPSAVGS(ph)SAAAPR	ddPTM_K562_Methotrexat_30min_R1	1	AAPRPAPVAQPPAAAPPSAVGSSAAAPR	28	1	Q9Y6H1;Q5T1J5	Q9Y6H1	CHCHD2;CHCHD2P9	Coiled-coil-helix-coiled-coil-helix domain-containing protein 2;Putative coiled-coil-helix-coiled-coil-helix domain-containing protein CHCHD2P9, mitochondrial	1	AAPRPAPVAQPPAAAPPS(0.048)AVGS(0.675)S(0.277)AAAPR	86.022	9.954e-05	5649900.0	1182.3	1166.9	1653.5	1100.5	1115.9	1276.3	1182.2	1314.1	1255.3	1435.6	True	False	1130.3275076460477	1359.7103910913672	1306.4529464144703	1004.0208736364767	1262.6604094160953	1522.9269118108045	1447.3384436765045	1267.8823581610288	1196.9413769924581	1175.598928751575	0.9614907601578004	1.1566107775679153	1.1113083845711356	0.8540505176392894	1.0740571282733093	1.2954476859111075	1.2311498490505626	1.0784990757923318	1.0181545318891603	1.0	10.19918023412847	-6.243656883189509	23.09185835411868	1.096948323952243	0.9614904330190596	0.097647739412002	0.116896978835108	3358.291562368418	4360784.5285101645	0.031610194155300024	0.849732285436605	5.706149117788986e-07	6.243656883189509	-0.1354578909331835	
AAQDRDQIYR	ddPTM_K562_Methotrexat_30min_R1	2	AAQDRDQIYR	10	1	P62995;H7C2L4;P62995-3	P62995	TRA2B	Transformer-2 protein homolog beta	0	;	99.01299999999999	0.022826	25891000.0	3532.4	3413.6	3578.1000000000004	3831.9	3982.2	3098.1000000000004	3269.8	4080.4	4193.1	4433.5	False	True	3377.119925576331	3977.639378720965	2827.1057076296443	3495.9632764085522	4505.929099719307	3696.7639782817955	4003.135884903934	3936.8900192072647	3998.1636962216844	3630.5501885066233	0.9301950806980753	1.0956023666366426	0.7786989742159536	0.9629293343680696	1.2411146701631903	1.0182379491639553	1.1026251331208201	1.0843783489539502	1.101255591749931	1.0	11.825972481390725	-7.551346724788778	24.968061667639137	1.0932782756692283	0.9375599551361666	0.3843718884831756	0.09310539905405803	207.25718868993158	181775.26484458928	0.02663197538782027	0.034382298255385545	2.8096568077801976e-08	7.551346724788778	-0.15571832053306167	
AAQPPAQPCQLCGRS(ph)PLGEAPPGTPPCR	ddPTM_K562_Methotrexat_30min_R1	1	AAQPPAQPCQLCGRSPLGEAPPGTPPCR	28	1	M0QXZ5;Q96B54	M0QXZ5	ZNF428	Zinc finger protein 428	1	AAQPPAQPCQLCGRS(0.999)PLGEAPPGT(0.001)PPCR	55.096000000000004	0.0045373	79705000.0	896.46	894.26	1603.4	1311.0	991.08	1067.7	920.09	1114.9	1103.5	1267.3	True	False	857.052691790896	1042.0212651789932	1266.8682517574605	1196.0666654588106	1121.4243915799839	1274.0179140800722	1126.4436039945147	1075.6883350686642	1052.198525859299	1037.7796896119198	0.8258522501162003	1.004087163787778	1.2207487431472175	1.1525246422061723	1.0805996713997585	1.2276381266976752	1.0854361626750961	1.03652860605792	1.0138939279615031	1.0	10.019284490940564	-6.399953129272329	3.4442807826304884	1.108728502149855	0.8242594185401586	0.5506277351749569	0.0757169211053052	0.19111804743087304	3.7080967586963838	0.0199465812533842	0.11132534358018083	3.9815013812618147e-07	6.399953129272329	-0.28446908360969636	
AAQSPFSIPNSSSGPY(ph)GSQDSVHSSPEDGGGGR	ddPTM_K562_Methotrexat_30min_R1	1	AAQSPFSIPNSSSGPYGSQDSVHSSPEDGGGGR	33	0	Q8NHG8	Q8NHG8	ZNRF2	E3 ubiquitin-protein ligase ZNRF2	1	AAQSPFSIPNS(0.028)S(0.02)S(0.067)GPY(0.655)GS(0.228)QDS(0.001)VHSSPEDGGGGR	110.29	9.3868e-15	17345000.0	1536.8	1197.9	1595.0	1478.3	1183.1	1281.0	1296.2	1798.2	1803.9	1633.1	True	False	1469.2441121123627	1395.832614181463	1260.2312969646675	1348.699734208817	1338.6983872929318	1528.5351202927527	1586.9058456212852	1734.956286770537	1720.0370827345616	1337.329764937446	1.098640104059216	1.043746015962453	0.9423489478854269	1.0085019937262092	1.0010233993076119	1.1429754727430674	1.1866226918949292	1.2973287010116685	1.2861727360229784	1.0	10.385139540354196	-8.475352432780987	2.463546707087715	1.218076597268842	1.0148039230964971	0.4747351008027042	0.08548762030980211	0.2277929080850294	2.7477680068349337	0.03478206071306445	0.028041769280209104	3.3469372280216866e-09	8.475352432780987	-0.20327267417234496	
AAS(ph)ALLLR	ddPTM_K562_Methotrexat_30min_R1	4	AASALLLR	8	0	F5H672;F5H5N2;B4DNC9;B3KQ30;Q9H1K1	F5H672	ISCU	Iron-sulfur cluster assembly enzyme ISCU, mitochondrial	1	AAS(1)ALLLR;AAS(1)ALLLR;AAS(1)ALLLR;AAS(1)ALLLR	101.46	0.014997	152637000.0	12443.1	10852.4	14655.900000000001	13115.3	10476.2	10172.5	9624.3	12130.3	12226.800000000001	12729.2	True	False	11896.116222947257	12645.574640740391	11579.82687472381	11965.502011816872	11854.003926090962	12138.191655876677	11782.79426786988	11703.670473480512	11658.378736725394	10423.818531530065	1.1412436034802191	1.213142247487323	1.1109006588801447	1.147900069022068	1.1372035967658933	1.1644669004128343	1.1303721598979464	1.1227814872332187	1.1184364637067519	1.0	13.34759625287929	-15.99999999998738	0.18899188913026202	0.37115427337633433	1.1708555255535242	0.7673491349321999	0.024609546370637947	61.23753298076315	0.597997999895284	14.422130255994714	0.06612468271795231	1.0000000000290569e-16	15.99999999998738	0.7997012521771899	
AAS(ph)LNYLNQPSAAPLQVSR	ddPTM_K562_Methotrexat_30min_R1	3	AASLNYLNQPSAAPLQVSR	19	0	Q9NSK0-3;Q9NSK0-5;Q9NSK0	Q9NSK0-3	KLC4	Kinesin light chain 4	1	AAS(1)LNYLNQPSAAPLQVSR;AAS(0.875)LNY(0.12)LNQPS(0.005)AAPLQVSR;AAS(1)LNYLNQPSAAPLQVSR	207.1	1.5657999999999998e-21	121823000.0	3540.8999999999996	3162.58	4561.9	4135.4	3328.26	3044.2200000000003	2904.52	3926.46	3896.43	4572.299999999999	True	False	3385.2462757539447	3685.142590331422	3604.419532052115	3772.8559026227026	3765.9845275053426	3632.4724308334157	3555.932546461919	3788.3641762612847	3715.2858197679625	3744.2121635071258	0.9041277918885491	0.9842237644139337	0.9626643402268984	1.007650137829996	1.00581493864328	0.9701566770807545	0.9497144903057927	1.011792070220936	0.9922743844429829	1.0	11.870446471337491	-5.22846310801398	1.3343473756040785	0.9881980972006584	1.5749136941361358e-06	0.612490152963594	0.0197520713336488	13.090235776010248	2.3249937688412086	0.0059028562717309266	32.81839331012981	5.909311612349286e-06	5.22846310801398	-0.9881965222869643	
AAS(ph)LRGGVGAPGSPSTPPTR	ddPTM_K562_Methotrexat_30min_R1	3	AASLRGGVGAPGSPSTPPTR	20	1	Q9ULR3	Q9ULR3	PPM1H	Protein phosphatase 1H	1	AAS(1)LRGGVGAPGSPSTPPTR;AAS(1)LRGGVGAPGSPSTPPTR;AAS(1)LRGGVGAPGSPSTPPTR	101.23	0.00064388	118244000.0	3425.23	2610.0099999999998	3789.7	3834.2000000000003	2866.62	3020.9700000000003	3038.1499999999996	3393.26	3411.6	3976.3	True	False	3274.6609904545962	3041.269789915485	2994.293759314736	3498.061638979536	3243.630775912149	3604.729697385479	3719.5324756012283	3273.9171224819243	3252.9954606448437	3256.1535388652082	1.0056838387282676	0.9340068745576993	0.9195800270395934	1.074292596226477	0.9961541239368512	1.10705151165622	1.1423086875987767	1.0054553888214088	0.9990301199919874	1.0	11.66895301391516	-7.2643365105824325	24.997527628074113	1.0509936263308461	0.9511819077938851	0.40419078991724255	0.051642570814488864	247.68938004178472	2137160.602743541	0.015124621310675879	0.023629117386377123	5.4408091150537725e-08	7.2643365105824325	-0.09981171853696102	
AAS(ph)NT(ph)SATPSTATRGVSRGLGLPS	ddPTM_K562_Methotrexat_30min_R1	1	AASNTSATPSTATRGVSRGLGLPS	24	2	O00322-2	O00322-2			2	AAS(0.968)NT(0.968)S(0.037)AT(0.014)PS(0.006)T(0.002)AT(0.002)RGVS(0.003)RGLGLPS(0.001)	46.353	0.029547000000000004	0.0	523.36	575.69	567.32	691.31	640.21	624.5	451.29	472.08	492.8	662.61	True	False	500.35372105356953	670.8129874431312	448.24728488651743	630.7039256280166	724.4088365554967	745.1757865908072	552.5032703829887	455.47667882250863	469.88983556272075	542.6049081778218	0.9221326853342694	1.236282564593561	0.8261025253011872	1.1623631045764944	1.335057655464654	1.3733303465559494	1.0182423012692745	0.8394260205866777	0.8659889147348608	1.0	9.083758287471499	-8.998960045526832	24.99960361347239	0.8973912815851215	1.1465493901007913	0.3086558276407535	0.16223155187903937	43.03587159583223	1034528.2644214503	0.07252829863375249	0.04845132522752877	1.002397452972585e-09	8.998960045526832	0.24915810851566977	
AAS(ph)PESASSTPESLQAR	ddPTM_K562_Methotrexat_30min_R1	4	AASPESASSTPESLQAR	17	0	Q96BT3	Q96BT3	CENPT	Centromere protein T	1	AAS(0.992)PES(0.008)ASSTPESLQAR;AAS(0.904)PES(0.085)AS(0.008)S(0.002)TPESLQAR;AAS(0.997)PES(0.003)ASSTPESLQAR;AAS(0.823)PES(0.176)ASSTPESLQAR	247.02	7.703099999999997e-66	153962000.0	5166.950000000001	5125.8	6477.800000000001	5379.0	5311.0	4380.53	4512.81	5695.8	5372.4	5944.5	True	False	4939.81706473124	5972.7513262971415	5118.198304374754	4907.431421436263	6009.489590831511	5227.005425836073	5524.922519038882	5495.475485589827	5122.638296625735	4867.893446617264	1.0147751011608432	1.226968377963912	1.0514195432793272	1.0081221939741665	1.2345154339825475	1.0737715365294938	1.1349719503162485	1.1289227148980991	1.0523316405344687	1.0	12.249081873888896	-9.979018355173928	3.880085676372106	1.0003797276670834	1.1114318994415788	0.1840317311359314	0.07380068644152565	0.2982666415942839	10.981405607407323	0.06783798703911843	0.017873251439026537	1.0494980713612923e-10	9.979018355173928	0.11105217177449545	
AAS(ph)PFR	ddPTM_K562_Methotrexat_30min_R1	1	AASPFR	6	0	C9JFK9;O95817	C9JFK9;O95817	BAG3	BAG family molecular chaperone regulator 3	1	AAS(1)PFR	79.45100000000001	0.034163	7602800.0	675.61	761.83	650.26	674.95	474.4	740.89	605.52	768.58	644.3	569.22	True	False	645.9109933525724	887.7094586041111	513.7793123286806	615.7781814274779	536.7919152495706	884.0565068491	741.3232739088115	741.5486057647087	614.3466336303997	466.128742145425	1.3856922668610254	1.9044297816056135	1.1022262003495793	1.3210474397980045	1.151595829038364	1.8965929944163107	1.59038309994952	1.5908665111523135	1.317976297283837	1.0	8.864584663973643	-10.054191623698925	4.707577174481638	1.000171925421203	1.492163574990561	0.25670325308459985	0.25727059933169455	0.38613630897218215	25.222544290006883	0.2540741963009417	0.06633609895856266	8.82690345134632e-11	10.054191623698925	0.49199164956935815	
AAS(ph)PPASASDLIEQQQK	ddPTM_K562_Methotrexat_30min_R1	2	AASPPASASDLIEQQQK	17	0	Q5VSL9-3;Q5VSL9-2;Q5VSL9	Q5VSL9-3	STRIP1	Striatin-interacting protein 1	1	AAS(1)PPASASDLIEQQQK;AAS(1)PPASASDLIEQQQK	252.47	2.0938999999999997e-79	108093000.0	4757.47	3122.41	5608.2	4415.09	3193.07	3100.68	2840.29	3635.62	4212.75	4998.889999999999	True	False	4548.337315233734	3638.3351806046794	4431.11546058762	4028.0259145694386	3613.0146729046082	3699.8425267676303	3477.2973339451332	3507.7531839109665	4016.9001720106603	4093.542580765509	1.1111005261323499	0.8887986649266261	1.0824647290609064	0.9839951179440722	0.8826131893390394	0.9038241214717607	0.849459182441157	0.8568991563427203	0.9812772415963202	1.0	11.999134186893974	-7.638050274202445	4.745845274458313	0.9019293301224135	1.0164068228199556	0.3411866074109082	0.07130065842339695	0.22826047919968315	8.483612559987872	0.020379682536139337	0.02652272327074566	2.3011754164755256e-08	7.638050274202445	0.11447749269754215	
AAS(ph)PPASASDLIEQQQKR	ddPTM_K562_Methotrexat_30min_R1	4	AASPPASASDLIEQQQKR	18	1	Q5VSL9-3;Q5VSL9-2;Q5VSL9	Q5VSL9-3	STRIP1	Striatin-interacting protein 1	1	AAS(0.989)PPAS(0.011)ASDLIEQQQKR;AAS(0.96)PPAS(0.037)AS(0.003)DLIEQQQKR;AAS(0.962)PPAS(0.029)AS(0.009)DLIEQQQKR;AAS(0.999)PPAS(0.001)ASDLIEQQQKR	104.49	0.00053044	269450000.0	7619.7	5881.47	10311.5	8721.900000000001	6086.9	5358.360000000001	5234.5	6489.01	6678.870000000001	8544.9	True	False	7284.747111571166	6853.282949603349	8147.257064985061	7957.264568623338	6887.434040751708	6393.7872343262125	6408.469872631247	6260.787840294122	6368.370791486996	6997.335808226067	1.0410743904854787	0.9794131848791123	1.1643370117248264	1.1371848924656123	0.9842937697308799	0.9137459469659406	0.9158442653413105	0.8947387994347707	0.9101136441101397	1.0	12.772590014164864	-7.972586846637327	4.588390500779414	0.9216760339019039	1.0788661177959342	0.6404847345348669	0.05413467216585007	0.13159427332269671	6.7342264715935025	0.018607766365628543	0.020624138002697787	1.0651558412674877e-08	7.972586846637327	0.15719008389403033	
AAS(ph)PQDLAGGYTSSLACHR	ddPTM_K562_Methotrexat_30min_R1	1	AASPQDLAGGYTSSLACHR	19	0	H0YJ92;P51948-2;P51948	H0YJ92	MNAT1	CDK-activating kinase assembly factor MAT1	1	AAS(1)PQDLAGGYTSSLACHR	133.17	2.1439e-07	51437000.0	2481.3	1725.1	2590.4	2210.6	1936.0	1585.7	1769.6	2658.1	2497.9	2915.6	True	False	2372.225023024731	2010.1434533136683	2046.710439910518	2016.8001301779148	2190.6179340707595	1892.1140829416229	2166.477846328828	2564.6131163745763	2381.7731742129085	2387.5565872583534	0.9935785546129284	0.8419249470530576	0.8572405993781153	0.8447130178781729	0.9175145610208385	0.7924897332441238	0.9074037691465183	1.0741580451165507	0.997577685456207	1.0	11.221319211397718	-9.125805141425298	5.169429275750017	1.025515822229858	0.8712902583121137	0.6051861239174003	0.05392491592947999	0.14260416653572075	5.377302595617518	0.025080546724945623	0.014241448310422882	7.485052633616403e-10	9.125805141425298	-0.15422556391774422	
AAS(ph)PS(ph)PQSVR	ddPTM_K562_Methotrexat_30min_R1	2	AASPSPQSVR	10	0	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2	A9Z1X7	SRRM1	Serine/arginine repetitive matrix protein 1	2	AAS(1)PS(1)PQSVR;AAS(1)PS(0.999)PQS(0.001)VR	92.781	0.022338	76248000.0	17822.8	15732.400000000001	21890.0	20608.0	16170.900000000001	16276.900000000001	15729.8	17570.7	17607.8	20580.0	True	False	17039.331052418147	18331.911694923172	17295.58814454958	18801.328635984108	18297.65679238887	19422.1805616652	19257.60806237749	16952.728521832432	16789.217221228253	16852.76257572264	1.0110704981368615	1.0877689407036049	1.026276141186778	1.1156229461790725	1.0857363420492068	1.1524627178717837	1.1426974050010748	1.005931724585843	0.9962293805416846	1.0	14.040697482981086	-9.355889232529249	7.799267706780447	0.9996719162415706	1.0896439728340845	0.47982586655816273	0.04204253320995504	0.2793550599138418	20.550841801467914	0.024653814209069747	0.011754351026623068	4.4066724202773933e-10	9.355889232529249	0.08997205659251395	
AAS(ph)PSPQSVR	ddPTM_K562_Methotrexat_30min_R1	3	AASPSPQSVR	10	0	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2	A9Z1X7	SRRM1	Serine/arginine repetitive matrix protein 1	1	AAS(0.992)PS(0.008)PQSVR;AAS(0.99)PS(0.01)PQSVR;AAS(0.95)PS(0.049)PQS(0.001)VR	112.84	0.0026469	38478000.0	5603.1	4830.3	6036.3	6427.4	5124.9	5542.8	4948.4	6381.9	5288.4	5782.799999999999	True	False	5356.794432962505	5628.424973938329	4769.3631209202695	5863.919821182265	5798.914178883902	6613.867653988036	6058.204664768073	6157.444959704641	5042.543438291177	4735.478883522299	1.1312043754649932	1.1885651086995972	1.0071553982672956	1.2382949993899286	1.2245676354005002	1.396662896545021	1.279322495946158	1.3002792560495315	1.0648434007038545	1.0	12.209294612773538	-7.319538610038591	22.35664348418754	1.2380312956370785	1.1169339797345148	0.1267553049095811	0.11617402655656038	139.196192740322	53562.01907880842	0.03205452310827075	0.04754460626637485	4.791388541813729e-08	7.319538610038591	-0.12109731590256367	
AAS(ph)SAAQGAFQGN	ddPTM_K562_Methotrexat_30min_R1	4	AASSAAQGAFQGN	13	0	O15127	O15127	SCAMP2	Secretory carrier-associated membrane protein 2	1	AAS(0.873)S(0.127)AAQGAFQGN;AAS(0.848)S(0.152)AAQGAFQGN;AAS(0.68)S(0.32)AAQGAFQGN;AAS(0.874)S(0.126)AAQGAFQGN	158.11	1.8675999999999999e-07	83963000.0	11025.3	9290.2	11467.5	12927.2	9046.8	9136.7	9290.9	11807.599999999999	12291.4	13287.6	True	False	10540.64101332146	10825.247643600154	9060.628462659768	11793.892446772794	10236.612771669084	10902.23796532302	11374.620830954185	11392.320015388605	11719.97549682555	10881.086880523424	0.9687121451248271	0.9948682298435445	0.8326951675092145	1.083889190139934	0.9407711641372963	1.0019438393454476	1.0453570452887533	1.0469836460712634	1.0770960314455067	1.0	13.409535050000313	-8.369045998734375	1.0202316683298291	1.0500074372862118	0.9553069871735786	0.2617101235251388	0.06060400971712252	0.6940302839586019	1.5088026796296206	0.03517982984617701	0.028770846765431766	4.275176027990654e-09	8.369045998734375	-0.09470045011263317	
AAS(ph)VPCSVAPEK	ddPTM_K562_Methotrexat_30min_R1	4	AASVPCSVAPEK	12	0	Q9C073;D6RFX7	Q9C073	FAM117A	Protein FAM117A	1	AAS(0.998)VPCS(0.002)VAPEK;AAS(0.995)VPCS(0.005)VAPEK;AAS(0.671)VPCS(0.329)VAPEK;AAS(0.987)VPCS(0.013)VAPEK	155.86	9.9165e-09	124671000.0	11934.0	8791.8	15747.5	13087.3	8830.4	8061.5	7534.0	9942.099999999999	10291.2	14490.599999999999	True	False	11409.395649368122	10244.49551495165	12442.314952320445	11939.956728344081	9991.75237862523	9619.270782388776	9223.691282912177	9592.430707764077	9812.764358244875	11866.21192321508	0.9615027713306517	0.8633332677051974	1.0485498685539465	1.0062146880239622	0.842033872585517	0.8106437711237582	0.7773071425487463	0.8083818804042617	0.8269500344121753	1.0	13.534571833332338	-7.8121981245712515	7.446096712019262	0.8289937313837858	0.9677776043234421	0.41376818208923827	0.07194762450442059	0.20097343675965954	24.57106758931277	0.022069465429185316	0.02522806386508422	1.5409972916341373e-08	7.8121981245712515	0.13878387293965622	
AASAPAKES(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	AASAPAKESPR	11	1	Q13428;Q13428-3;Q13428-4;E7ETY2;Q13428-6;Q13428-7;Q13428-2;Q13428-8;A0A6I8PRA0;A0A3B3IS06;H0Y8Y7;Q13428-5	Q13428	TCOF1	Treacle protein	1	AASAPAKES(1)PR;AASAPAKES(1)PR	128.35	0.0027670999999999998	109413000.0	9706.4	7715.1	13995.3	11134.099999999999	8673.0	8694.8	7831.200000000001	11295.8	10959.7	14171.8	True	False	9279.718278115193	8989.889140722442	11057.87778709067	10157.990739805446	9813.651519729185	10374.947044435152	9587.545948333145	10898.520311479611	10450.185939157373	11605.149692450255	0.7996207307995454	0.7746465473487882	0.9528423226013523	0.8753002769463404	0.8456290336447334	0.8939951072914283	0.8261458233985844	0.9391107051871685	0.9004783407452085	1.0	13.502477511379869	-15.999999999999595	0.020010145454325463	2.124822528165398	2.6538934143992872e-11	0.5036977926299517	0.04750624616785863	2871.0357467425742	4.339194819951091	310.7098907734203	169.7262739437389	1.0000000000009326e-16	15.999999999999595	-2.1248225281388593	
AASDPLLS(ph)SVSPAVSK	ddPTM_K562_Methotrexat_30min_R1	1	AASDPLLSSVSPAVSK	16	0	P19532	P19532	TFE3	Transcription factor E3	1	AASDPLLS(0.558)S(0.368)VS(0.073)PAVS(0.001)K	205.95	3.3659e-16	18394000.0	2761.5	2123.1	3660.1	3060.1	2300.6	1895.7	1954.0	3089.1	2745.0	3470.2	True	False	2640.107766526735	2473.9061884703774	2891.895028225945	2791.8257841117515	2603.169224753714	2262.017195580775	2392.234240351791	2980.4546020814505	2617.385549147055	2841.713153074474	0.9290549834948609	0.870568581418514	1.0176590220223949	0.9824446148237204	0.9160562958078026	0.7960047597110493	0.8418281900703496	1.0488231716339387	0.9210590260721012	1.0	11.47254521872107	-9.264701097999946	24.988134257849186	0.9887058187835116	0.9093685628315167	0.24093074134843062	0.06688456878167552	492.1209086688869	3770104.4407916265	0.0380578865200782	0.019457950557482517	5.436243507547593e-10	9.264701097999946	-0.07933725595199492	
AASDPLLSS(ph)VSPAVSK	ddPTM_K562_Methotrexat_30min_R1	1	AASDPLLSSVSPAVSK	16	0	P19532	P19532	TFE3	Transcription factor E3	1	AASDPLLS(0.091)S(0.665)VS(0.244)PAVSK	246.03	5.3514999999999995e-65	35808000.0	4296.5	3646.0	6370.1	4529.8	3603.3	3244.3	3199.8	4256.4	3732.6	5389.8	True	False	4107.631004483838	4248.439528596389	5033.103062567171	4132.679466968205	4077.197108386968	3871.2150591458085	3917.4366030080155	4106.699999449514	3559.0722407090366	4413.654991770159	0.9306642708011971	0.9625672003176878	1.1403480951619587	0.9363394906657023	0.923768875453437	0.8770996070975641	0.8875720033198318	0.9304533333726802	0.80637753683634	1.0	12.107758145562899	-7.508771146142315	23.657523956982867	0.9014112134235127	1.0116661300087062	0.3299591599228592	0.06812348383208083	357.90242105229163	600179.0099972356	0.01926249806165683	0.027292785412975577	3.0990519314182816e-08	7.508771146142315	0.11025491658519349	
AASGEDSTEEALAAAAAPWEGGPVPGVDRS(ph)PFAK	ddPTM_K562_Methotrexat_30min_R1	3	AASGEDSTEEALAAAAAPWEGGPVPGVDRSPFAK	34	1	A0A087WYF6;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2	A0A087WYF6	FAM21A	WASH complex subunit FAM21A	1	AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK;AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK;AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK	137.28	2.8709999999999997e-29	24996900.0	5256.8	3698.6499999999996	5921.09	5429.55	3971.55	3475.43	3472.34	4637.72	5137.22	6896.3	True	False	5025.71736631459	4309.789046199404	4678.334125482461	4953.549781420201	4493.87843804686	4147.007660514473	4251.100635692496	4474.608758915283	4898.391763493348	5647.313243486689	0.8899306890955598	0.7631574273253011	0.8284176782434023	0.8771515883474963	0.7957551218236141	0.7343328555924202	0.7527651561732457	0.7923429365417367	0.8673844627164771	1.0	12.463348941178964	-10.092930655371253	3.0679001457980366	0.9998179019324172	0.8020578392042725	0.608642218320077	0.04776258701680501	0.26744969298733573	5.637081277611601	0.04856134354742977	0.012949690540999587	8.073639332974948e-11	10.092930655371253	-0.19776006272814461	
AASIENVLQDS(ph)SPEHCGR	ddPTM_K562_Methotrexat_30min_R1	2	AASIENVLQDSSPEHCGR	18	0	K7EPJ5;O60291-4;O60291;O60291-3;O60291-2	K7EPJ5	MGRN1	E3 ubiquitin-protein ligase MGRN1	1	AASIENVLQDS(0.656)S(0.344)PEHCGR;AASIENVLQDS(0.656)S(0.344)PEHCGR	174.22	1.2041999999999999e-11	37721000.0	5385.3	4746.9	5574.1	4778.2	4835.0	4205.5	4383.5	5745.8	6083.2	6457.700000000001	True	False	5148.568660176149	5531.244541495942	4404.172584583544	4359.302624634083	5470.887247537252	5018.153355496624	5366.611459868002	5543.716957249556	5800.393359770993	5288.147953607585	0.9736052594110544	1.0459700806446832	0.8328383818344207	0.8243533771894862	1.0345563882729494	0.9489434485419852	1.0148376155411631	1.048328640931391	1.0968666933408988	1.0	12.368546826286417	-8.7369062967592	1.3468717339967917	1.055477320997729	0.933111037990343	0.31522596843349515	0.07124062259872008	0.5550628245739669	2.038621003466799	0.04670240527037536	0.027802920776328385	1.8327098046068345e-09	8.7369062967592	-0.12236628300738606	
AASLNYLNQPS(ph)AAPLQVSR	ddPTM_K562_Methotrexat_30min_R1	1	AASLNYLNQPSAAPLQVSR	19	0	Q9NSK0-3;Q9NSK0-5;Q9NSK0	Q9NSK0-3	KLC4	Kinesin light chain 4	1	AAS(0.155)LNY(0.053)LNQPS(0.792)AAPLQVSR	137.09	8.2116e-09	27277000.0	1344.1	1143.2	1376.3	1578.2	1404.9	1277.0	1197.7	1483.8	1709.6	1782.5	True	False	1285.0149733798967	1332.0943689224887	1087.433438252334	1439.8416563135731	1589.6689749876084	1523.76217690386	1466.3147132391719	1431.613912974154	1630.1210691518427	1459.671977221847	0.8803450319198631	0.9125984397246748	0.7449848015319276	0.9864145361302226	1.089059048741335	1.0439072618246696	1.0045508416418103	0.9807778290701344	1.1167721889505657	1.0	10.511428482531006	-7.460586904085895	6.882639741641333	1.0369188436200503	0.8534982561966189	0.7081202268517565	0.05543136516117381	0.13697482091100938	12.74128633078005	0.015479987758253402	0.022877084708694803	3.462685879274695e-08	7.460586904085895	-0.18342058742343137	
AASPYSQRPAS(ph)PTAIR	ddPTM_K562_Methotrexat_30min_R1	2	AASPYSQRPASPTAIR	16	1	A0A0D9SF60;Q99569-2;Q99569	A0A0D9SF60	PKP4	Plakophilin-4	1	AASPYSQRPAS(0.787)PT(0.213)AIR;AASPY(0.001)S(0.003)QRPAS(0.975)PT(0.021)AIR	174.35	7.734899999999999e-07	53799000.0	6213.799999999999	5182.6	6877.3	6795.200000000001	5803.299999999999	4837.0	5127.299999999999	6266.3	6068.6	7343.8	True	False	5940.648792194033	6038.93656086222	5433.848713865275	6199.475366228612	6566.535669831012	5771.68179301799	6277.227543784928	6045.910677227346	5786.472110584272	6013.766657123031	0.9878415859646977	1.004185380839374	0.9035682665587184	1.0308805977507653	1.091917269861685	0.9597448857084764	1.0438096290865957	1.0053450727201465	0.9622042956606007	1.0	12.554053174997938														
AASQLAVPSTPLS(ph)PHSAASGTAAGSQPSSPR	ddPTM_K562_Methotrexat_30min_R1	1	AASQLAVPSTPLSPHSAASGTAAGSQPSSPR	31	0	O95155;O95155-4	O95155	UBE4B	Ubiquitin conjugation factor E4 B	1	AASQLAVPS(0.161)T(0.161)PLS(0.677)PHS(0.002)AASGTAAGSQPSSPR	114.33	2.4492e-18	10149000.0	2026.6	1943.4	2700.6	2903.0	2542.3	2331.7	1985.2	2298.5	2395.6	2540.3	True	False	1937.5130905823223	2264.513817848114	2133.7809658826227	2648.4984971982635	2876.6570112541813	2782.268024970032	2430.4316345682596	2217.6604521977983	2284.229078884039	2080.227053989711	0.9313950065529268	1.0885897351949902	1.0257442627669897	1.2731776043959495	1.3828572250019442	1.337482857764907	1.1683492097205852	1.066066537277506	1.098067191513094	1.0	11.022525289849332	-7.246067061978939	23.06819706489368	1.2055315638745971	1.0225775923369689	0.3049176135053987	0.11863315705759454	381.44919620447456	572410.9792550562	0.035110379496048116	0.06043535006136048	5.67456974256124e-08	7.246067061978939	-0.18295397153762827	
AASSS(ph)S(ph)PGSPVASSPSR	ddPTM_K562_Methotrexat_30min_R1	1	AASSSSPGSPVASSPSR	17	0	A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538	A0A669KB10	GBF1	Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1	2	AAS(0.014)S(0.085)S(0.82)S(0.679)PGS(0.1)PVAS(0.297)S(0.005)PS(0.001)R	130.47	7.1153e-05	5026900.0	2832.5	2335.6	3255.9	3232.2	2974.0	2891.8	2938.1	2740.2	3116.5	3401.4	True	False	2707.9866915397365	2721.5182015879677	2572.5310845061217	2948.838044314239	3365.133128061178	3450.5994229996754	3597.043716262847	2643.8256128398552	2971.614595233807	2785.373499760107	0.9722167213025343	0.9770747807510775	0.9235856823968791	1.058686759448315	1.2081443039330286	1.2388282660464969	1.291404444169748	0.9491817212548183	1.06686395755892	1.0	11.443655080852976	-7.491713482105295	4.7707070561638085	1.1373748255139238	0.9620431492053647	0.3565565679275364	0.10014210139954059	0.2267945821520151	12.799734909252656	0.0314316898002968	0.04528533901437556	3.2231945340350265e-08	7.491713482105295	-0.17533167630855906	
AASSSSPGSPVAS(ph)SPSR	ddPTM_K562_Methotrexat_30min_R1	1	AASSSSPGSPVASSPSR	17	0	A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538	A0A669KB10	GBF1	Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1	1	AASSSSPGSPVAS(0.62)S(0.379)PS(0.001)R	188.0	7.6961e-09	4051500.0	3932.9	2932.0	4318.0	3647.8	3394.8	3147.5	2568.3	3371.8	3844.8	3994.0	True	False	3760.014425121493	3416.4631645212858	3411.7108089614017	3328.003037574866	3841.2757038137465	3755.7098291346115	3144.306652761264	3253.2118828455687	3666.0560871987595	3270.647897348698	1.1496237268981149	1.0445829914283316	1.0431299595798906	1.017536323696801	1.1744693480847082	1.1483075974577153	0.961371187436639	0.9946689417355921	1.1208959821601687	1.0	11.675360738643727	-8.761154559856847	24.999999211983805	1.018789780305651	1.091484925967839	0.2698965219467059	0.061773133727746045	12.110866026976087	1063213.8932954133	0.02608015422428769	0.018914363106707018	1.733187068850346e-09	8.761154559856847	0.07269514566218804	
AAT(ph)PLPSLR	ddPTM_K562_Methotrexat_30min_R1	3	AATPLPSLR	9	0	Q9Y3Q8	Q9Y3Q8	TSC22D4	TSC22 domain family protein 4	1	AAT(0.997)PLPS(0.003)LR;AAT(0.936)PLPS(0.064)LR;AAT(0.99)PLPS(0.01)LR	100.82	0.019174	80741000.0	12768.1	11327.699999999999	18050.1	13461.099999999999	11577.599999999999	10757.6	10212.400000000001	12912.0	12663.900000000001	13501.9	True	False	12206.829612091267	13199.409887021757	14261.630679211252	12280.986262706014	13100.257331352079	12836.3539500869	12502.790663341162	12457.877641408737	12075.158053130566	11056.575073913966	1.104033530319088	1.193806382065223	1.2898777952368856	1.1107405485520403	1.1848386361758463	1.1609701796691099	1.1308014081900721	1.1267392983927633	1.092124638272458	1.0	13.432616939706948	-10.013022025525904	0.5303253004727716	0.9959586957300113	1.1861536128991759	0.5540149474732505	0.04820690880120968	0.7570682148363249	0.5174095921949372	0.05544161071123345	0.02577542805395477	9.704607484520782e-11	10.013022025525904	0.1901949171691646	
AATAARPPAPPPAPQPPS(ph)PTPS(ph)PPRPTLAR	ddPTM_K562_Methotrexat_30min_R1	1	AATAARPPAPPPAPQPPSPTPSPPRPTLAR	30	2	Q96B36;Q96B36-3;H9KV91	Q96B36	AKT1S1	Proline-rich AKT1 substrate 1	2	AATAARPPAPPPAPQPPS(0.879)PT(0.483)PS(0.627)PPRPT(0.011)LAR	70.666	0.00012289	21380000.0	771.77	648.43	944.83	647.86	640.42	704.01	729.53	871.42	1010.1	903.88	True	False	737.8439148913051	755.572036074536	746.5230948659108	591.0631196675397	724.6464552363614	840.0499688035135	893.1456731647097	840.7716646744418	963.1406714730203	740.1785732237215	0.9968458174596324	1.0207969582039789	1.0085716094354864	0.7985412453825367	0.9790157151946284	1.1349287850157823	1.2066624264395631	1.135903814416843	1.3012274420187895	1.0	9.53172956271183	-8.286908912094242	3.9330258820658828	1.1711247225810897	0.9560777659948849	0.5359645995193628	0.09081591866230564	0.17116514094601273	6.002219543715451	0.03247886117116138	0.02965459426636347	5.165246925891654e-09	8.286908912094242	-0.21504695658620476	
AATAARPPAPPPAPQPPS(ph)PTPSPPRPTLAR	ddPTM_K562_Methotrexat_30min_R1	1	AATAARPPAPPPAPQPPSPTPSPPRPTLAR	30	2	Q96B36;Q96B36-3;H9KV91	Q96B36	AKT1S1	Proline-rich AKT1 substrate 1	1	AATAARPPAPPPAPQPPS(0.557)PT(0.243)PS(0.062)PPRPT(0.137)LAR	50.803000000000004	0.0047125	11202000.0	498.34	350.67	473.21	444.26	426.76	214.99	426.42	469.3	399.2	643.06	True	False	476.43357029546763	408.61225712915393	373.8896877972733	405.31241555814717	482.88642021902774	256.5337747944877	522.0555398008247	452.79445299822794	380.6412791327886	526.5956026211951	0.904742781603113	0.7759507582198476	0.7100129320035924	0.7696843907177618	0.9169966817333842	0.48715517850426204	0.9913784642375066	0.8598523245245255	0.7228341392106188	1.0	9.04055166386838	-15.89053701159487	0.3601792515868731	3.349695727008453	0.7860442410895202	0.1742787854591784	0.1336635050302974	783.4004810183593	6.780451938311564	1422.2704770844489	0.09615352493905885	1.2866575963774881e-16	15.89053701159487	-2.5636514859189328	
AATESVPCS(ph)PSPLAGEIR	ddPTM_K562_Methotrexat_30min_R1	2	AATESVPCSPSPLAGEIR	18	0	J3QKZ5;J9JIE4;J3QS16;Q8N9M1-2;Q8N9M1	J3QKZ5	C19orf47	Uncharacterized protein C19orf47	1	AAT(0.083)ES(0.007)VPCS(0.9)PS(0.011)PLAGEIR;AATES(0.004)VPCS(0.975)PS(0.021)PLAGEIR	124.04	8.053800000000001e-05	50139000.0	4282.0	4237.6	4534.6	4652.0	4029.5	4020.7000000000003	4199.5	4360.299999999999	4811.2	4615.5	True	False	4093.76840712203	4937.791373115763	3582.849428975538	4244.166382695944	4559.449878790352	4797.643370929799	5141.344776027305	4206.945777558432	4587.5283621334465	3779.588224890566	1.083125505620539	1.3064363309732587	0.9479470290918466	1.122917664613803	1.2063350840083555	1.2693561005759324	1.3602923043756088	1.1130698709064373	1.2137640634824112	1.0	11.884013350254456	-5.966121916075897	15.941915965178701	1.1773484760509239	0.756587459763892	0.04175630679295472	0.12326224115315679	5509800.368224998	73020052.79614423	0.030963239951761347	64193003.43420682	1.0811304114531595e-06	5.966121916075897	-0.4207610162870319	
AATESVPCS(ph)PSPLAGEIRR	ddPTM_K562_Methotrexat_30min_R1	2	AATESVPCSPSPLAGEIRR	19	1	J3QKZ5;J9JIE4;J3QS16;Q8N9M1-2;Q8N9M1	J3QKZ5	C19orf47	Uncharacterized protein C19orf47	1	AATES(0.005)VPCS(0.96)PS(0.035)PLAGEIRR;AAT(0.015)ES(0.074)VPCS(0.907)PS(0.003)PLAGEIRR	118.84	0.00010009	57543000.0	5311.2	4319.6	5514.8	5744.6	4617.6	4657.7	4234.6	4958.7	4875.0	5954.1	True	False	5077.726007451312	5033.340479354077	4357.318844201101	5240.97983706688	5224.8953369654655	5557.734605610895	5184.3168445208275	4784.299710382084	4648.36231405898	4875.754793591358	1.041423578996512	1.0323202647454395	0.8936706271464504	1.0749063599251483	1.0716074860518034	1.1398716385237266	1.0632849812986986	0.9812428870849943	0.9533626096555838	1.0	12.251409857920251	-9.308374541875333	7.470314725450374	0.9749690298012499	1.0447322961880088	0.2115018889414737	0.05927929209723935	0.5000473500338134	69.66276451734171	0.035829333172459094	0.01720258678778009	4.916153765589799e-10	9.308374541875333	0.0697632663867589	
AATPLPSLRVEAEAGGSGART(ph)PPLSR	ddPTM_K562_Methotrexat_30min_R1	1	AATPLPSLRVEAEAGGSGARTPPLSR	26	2	Q9Y3Q8	Q9Y3Q8	TSC22D4	TSC22 domain family protein 4	1	AATPLPS(0.116)LRVEAEAGGS(0.058)GART(0.683)PPLS(0.143)R	55.88399999999999	0.0069175	25678000.0	930.77	927.91	880.74	1127.2	903.04	1035.0	923.96	1002.6	840.1	1172.9	True	False	889.8544652725295	1081.2313557267898	695.8847100242396	1028.3801260909004	1021.8055884211045	1234.9991018758778	1131.1815500079022	967.3379897209104	801.0439343673737	960.4764443666226	0.9264719301464347	1.125723969669863	0.7245203295778215	1.070697914688638	1.063852835136342	1.2858192505598476	1.1777296118426408	1.0071438975880482	0.8340068505226225	1.0	9.90760642208075	-6.216717931684995	21.08472476937413	1.0374452177160294	0.9264691058699293	0.04044290778750792	0.15251068475629256	14472.902114977895	6822330.469090897	0.040176885178394024	12.283358075442063	6.071305245189152e-07	6.216717931684995	-0.11097611184610012	
AATSGVPSIYAPSTYAHLS(ph)PAK	ddPTM_K562_Methotrexat_30min_R1	1	AATSGVPSIYAPSTYAHLSPAK	22	0	S4R3V8;Q86X29-6;Q86X29-5;Q86X29-4;Q86X29;Q86X29-2;Q86X29-3	S4R3V8	LSR	Lipolysis-stimulated lipoprotein receptor	1	AATSGVPSIY(0.001)APS(0.033)T(0.033)Y(0.021)AHLS(0.913)PAK	52.465	0.028611	5664600.0	933.78	728.52	1286.7	1232.7	743.04	606.89	787.36	1264.3	1379.3	1367.5	True	False	892.7321492766016	848.8955472773011	1016.6392537958866	1124.6311048902173	840.7627839524463	724.1629033212093	963.9455227652953	1219.8338523879381	1315.1766440577537	1119.8324986540679	0.797201501429527	0.7580558237929269	0.9078493926705916	1.0042851107124655	0.7507933418283209	0.6466707335173647	0.8607943812345741	1.0893002782595276	1.1744405039490022	1.0	10.129067238879674	-9.231771376305844	4.4565297154118175	1.1022007248992316	0.8147867228300582	0.614502731717925	0.09832129836966114	0.14317509958782895	7.000723952008724	0.05558354039402065	0.02923103716229848	5.864468038269307e-10	9.231771376305844	-0.28741400206917345	
AAVGQES(ph)PGGLEAGNAK	ddPTM_K562_Methotrexat_30min_R1	4	AAVGQESPGGLEAGNAK	17	0	Q29RF7	Q29RF7	PDS5A	Sister chromatid cohesion protein PDS5 homolog A	1	AAVGQES(1)PGGLEAGNAK;AAVGQES(1)PGGLEAGNAK;AAVGQES(1)PGGLEAGNAK;AAVGQES(1)PGGLEAGNAK	239.75	1.3108999999999998e-64	324577000.0	17624.600000000002	13290.599999999999	24041.7	18495.4	12980.8	11736.400000000001	11511.0	16449.199999999997	15731.400000000001	20738.3	True	False	16849.843687100176	15486.645748426545	18995.675719269893	16873.936997961002	14688.00272654221	14004.293197348848	14092.634770056029	15870.672312504683	15000.050647669206	16982.392911764287	0.9921949029590353	0.9119236510950358	1.1185511852167156	0.99361362592617	0.8648959426894031	0.8246360374601622	0.8298379882786469	0.9345368697429278	0.8832707337302363	1.0	14.05175213636174	-7.729372854539863	6.990481800466442	0.8799860880792575	1.0064179915512796	0.4074645892759323	0.06709939686763404	0.17768175844042935	27.268867102810656	0.0201636243189906	0.025617715374946625	1.8647780368070298e-08	7.729372854539863	0.12643190347202216	
AAVPSGAS(ph)TGIYEALELR	ddPTM_K562_Methotrexat_30min_R1	2	AAVPSGASTGIYEALELR	18	0	P06733;A0A2R8Y6G6;K7EM90;K7ERS8;A0A2R8YEM5;A0A2R8Y879;A0A2R8YEG5;A0A2R8Y798;P13929-3;P09104-2;F5H1C3;P13929-2;E5RI09;E5RG95;K7EKN2;P09104;K7EPM1;E5RGZ4;F5H0C8;P13929	P06733	ENO1;ENO3;ENO2	Alpha-enolase;Enolase;Beta-enolase;Gamma-enolase	1	AAVPSGAS(0.997)T(0.002)GIYEALELR;AAVPS(0.069)GAS(0.899)T(0.033)GIYEALELR	195.17	5.746699999999998e-102	7728600.0	1395.69	1008.3399999999999	1272.88	1130.9699999999998	1298.3	1144.0	1322.6599999999999	1451.44	1367.1599999999999	1630.65	True	False	1334.3371387520187	1174.9510461505436	1005.7198829344118	1031.8196160442023	1469.049206510365	1365.0618092231919	1619.3001741779428	1400.3920325159772	1303.6010300079733	1335.3234836784322	0.9992613438328094	0.8798999347438204	0.7531657274265429	0.7727113532084645	1.1001448146958044	1.0222705029217634	1.2126650912460826	1.0487286785807883	0.9762436188248014	1.0	10.382973563478455	-7.76803646461027	24.999955030212053	1.0681911449620392	0.8462986172136034	0.577647348754419	0.08723596883787439	111.8833370773054	423986.18305465014	0.028222278628235817	0.03274326371469746	1.7059391474462193e-08	7.76803646461027	-0.2218925277484357	
AAVPSGASTGIYEALELRDNDKTR	ddPTM_K562_Methotrexat_30min_R1	1	AAVPSGASTGIYEALELRDNDKTR	24	2	P06733;A0A2R8Y6G6;K7EM90;K7ERS8;A0A2R8YEM5;A0A2R8Y879;A0A2R8YEG5;A0A2R8Y798	P06733	ENO1	Alpha-enolase;Enolase	0		90.755	0.00029321	11008000.0	1840.3	1226.8	2084.2	1899.4	1626.5	1252.8	1172.7	1676.6	1724.8	2548.5	False	True	1759.4026155130016	1429.507847965456	1646.754902278221	1732.8825510087443	1840.4132591766993	1494.8858694010614	1435.7078268477724	1617.633027694074	1644.6144244695242	2086.9419545300843	0.8430529712117295	0.684977291707827	0.7890755651845717	0.8303453516027169	0.8818708422540215	0.7163044789799456	0.6879481356591204	0.7751212362100964	0.788049912408724	1.0	11.027174759105131	-10.362463045491987	3.203219374462846	0.999997905321702	0.7741275624693728	0.5374057194765982	0.06201920394932481	5.0734560315228325	43.8681760312233	0.06300789441965046	0.016720543771686722	4.340471955396314e-11	10.362463045491987	-0.2258703428523292	
AAVQELSS(ph)SILAGEDPEER	ddPTM_K562_Methotrexat_30min_R1	2	AAVQELSSSILAGEDPEER	19	0	P49768;P49768-2;P49768-7;E7ES96	P49768	PSEN1	Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12;Presenilin	1	AAVQELS(0.019)S(0.666)S(0.315)ILAGEDPEER;AAVQELS(0.02)S(0.887)S(0.093)ILAGEDPEER	203.06	1.2779e-20	18058400.0	2357.1	1452.62	1407.7	2360.08	1622.2199999999998	1468.49	1514.23	2214.52	2775.3999999999996	2954.5	True	False	2253.4847063118477	1692.6407646817584	1112.2430073587234	2153.175450660585	1835.5703641571617	1752.2549092886063	1853.83462321796	2136.6340763981143	2646.372259782419	2419.4114203096483	0.9314185621325354	0.6996084876151927	0.4597163582936105	0.8899583727620045	0.758684673779971	0.7242484244636425	0.7662337243083266	0.8831214312961527	1.093808286415265	1.0	11.240440404773944	-9.486645805789365	2.510626777280657	1.0462290499886866	0.7379994848321978	0.4913961618867012	0.1211910209548615	0.2524556444599608	2.994514143087378	0.09735962529323255	0.03392847757202373	3.26102549527659e-10	9.486645805789365	-0.3082295651564888	
AAVVT(ph)SPPPTTAPHK	ddPTM_K562_Methotrexat_30min_R1	1	AAVVTSPPPTTAPHK	15	0	E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;P35611;P35611-3;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25	E7EV99	ADD1	Alpha-adducin	1	AAVVT(0.585)S(0.415)PPPTTAPHK	117.48	0.0020098	68496000.0	5255.9	4291.5	7121.0	4628.0	4246.5	3972.1	3704.5	4630.4	4826.3	6081.2	True	False	5024.856929236965	5000.597431972413	5626.399414222822	4222.2704254335395	4804.9891823509715	4739.652108754756	4535.328425477594	4467.546207464293	4601.926366429301	4979.835751967181	1.0090406952181101	1.0041691495541858	1.129836342895492	0.8478734311198154	0.9648890890533609	0.9517687620284374	0.9107385567256925	0.8971272206517015	0.9241120783173231	1.0	12.281882443877098	-7.264038959766229	24.999857205969114	0.9255854615378397	1.0433307693908145	0.5446666515246219	0.050032153338985204	169.516415311284	1630224.2362196383	0.01356314216022861	0.02119291913056545	5.444538086929848e-08	7.264038959766229	0.11774530785297477	
AAVVT(ph)SPPPTTAPHKER	ddPTM_K562_Methotrexat_30min_R1	2	AAVVTSPPPTTAPHKER	17	1	E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;P35611;P35611-3;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25	E7EV99	ADD1	Alpha-adducin	1	AAVVT(0.979)S(0.021)PPPTTAPHKER;AAVVT(0.581)S(0.419)PPPTTAPHKER	118.16	0.0022862	198821000.0	4663.700000000001	3774.1000000000004	6740.5	5966.5	3308.7	3340.5	3103.28	4183.1	4359.1	5591.2	True	False	4458.689332156708	4397.705876268688	5325.761164382665	5443.426208588859	3743.8520446590496	3986.004347648664	3799.2695360281036	4035.9780019963496	4156.446392454258	4578.579500164261	0.973814986066475	0.9604956900084222	1.1631907154154686	1.1888897437280646	0.8176885526449273	0.8705766379082557	0.8297921955689098	0.8814913013635681	0.9078026039091691	1.0	12.160684357669927	-7.7727193891757915	24.99998983950652	0.8751956867624423	1.0702042832276242	0.5578330296559975	0.08131943529302496	165.7639372983576	367382.7600293303	0.02669183259137624	0.0305345664553444	1.6876431105328716e-08	7.7727193891757915	0.19500859646518187	
AAVVTS(ph)PPPTTAPHK	ddPTM_K562_Methotrexat_30min_R1	2	AAVVTSPPPTTAPHK	15	0	E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;P35611;P35611-3;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25	E7EV99	ADD1	Alpha-adducin	1	AAVVT(0.176)S(0.824)PPPTTAPHK;AAVVT(0.186)S(0.814)PPPTTAPHK	107.73	0.0011201	425160000.0	12820.8	9885.5	17374.800000000003	11736.3	10519.8	9131.599999999999	8094.1	11578.1	11482.2	12639.3	True	False	12257.212983192456	11518.910850230279	13728.066920690728	10707.39680078126	11903.338090308669	10896.152462502185	9909.407965625092	11170.891660470454	10948.395028202669	10350.200292678875	1.1842488682912242	1.1129167092909382	1.3263576097557412	1.034511072056745	1.150058719030625	1.0527479811390204	0.9574121935238709	1.0792923174996032	1.0577954743491216	1.0	13.337371065965701	-7.828380782291882	1.2973991188832215	1.0304136663294834	1.1902710584805392	0.46673831828733514	0.07297793675630655	0.39809661579697786	1.4074183123811173	0.029137677419630154	0.038847286718371454	1.4846333692314306e-08	7.828380782291882	0.15985739215105577	
AAVVTS(ph)PPPTTAPHKER	ddPTM_K562_Methotrexat_30min_R1	1	AAVVTSPPPTTAPHKER	17	1	E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;P35611;P35611-3;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25	E7EV99	ADD1	Alpha-adducin	1	AAVVT(0.238)S(0.762)PPPTTAPHKER	149.24	3.1549e-10	333020000.0	4368.3	3112.3	5442.7	4944.9	3526.0	2770.3	2774.0	3328.0	3338.9	5158.5	True	False	4176.274762454732	3626.5546749452947	4300.351648896299	4511.3882944525285	3989.7308034780467	3305.621267562073	3396.140113989699	3210.9523536716442	3183.6752677767245	4224.245663112985	0.9886439131423758	0.8585094154473885	1.0180164677560983	1.06797488930318	0.9444836123801292	0.7825352811337332	0.8039636860245888	0.7601244363485689	0.7536671684550111	1.0	12.044478022447702	-8.179773280656024	4.700763478533076	0.8041332354313906	0.9795149767924446	0.4693227003551037	0.08230557218673024	0.18694372282303476	7.415534648663386	0.027494058405913614	0.027356985375693067	6.6103844684340254e-09	8.179773280656024	0.175381741361054	
AAYGDLS(ph)S(ph)EEEEENEPESLGVVYK	ddPTM_K562_Methotrexat_30min_R1	1	AAYGDLSSEEEEENEPESLGVVYK	24	0	O15541	O15541	RNF113A	RING finger protein 113A	2	AAY(0.216)GDLS(0.879)S(0.884)EEEEENEPES(0.02)LGVVY(0.001)K	52.685	0.025336	0.0	1069.2	658.94	1469.0	1136.1	713.7	875.36	618.27	1065.3	1180.1	1221.7	True	False	1022.1992482239308	767.8186349350809	1160.676975072789	1036.4998769090423	807.5640596830065	1044.5109312251861	756.9327859684253	1027.8327951822118	1125.2374085786673	1000.4382914849541	1.0217514232753695	0.7674822539983001	1.1601684831055317	1.0360457868626378	0.8072102662967211	1.0440533315401341	0.7566011741163038	1.0273825021797156	1.124744442666697	1.0	9.966416467083926	-9.50931156963302	24.592284105273233	1.066936020532499	0.9421029273272431	0.13515947312388832	0.12807699630050476	960.8585350851561	1741701.5217859815	0.0727505763185546	0.03251326136019913	3.0951979592223023e-10	9.50931156963302	-0.12483309320525582	
AAYLNMSEDPSHPS(ph)MALNT(ph)R	ddPTM_K562_Methotrexat_30min_R1	3	AAYLNMSEDPSHPSMALNTR	20	0	Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;F5GWX5;A0A2R8YFD8;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8YDJ9;A0A2R8Y425;A0A2R8YD40;A0A2R8Y4X2;A0A2R8YDW2;A0A2R8Y7I0;A0A2R8Y7M9	Q14839-2	CHD4	Chromodomain-helicase-DNA-binding protein 4	2	AAY(0.001)LNMSEDPS(0.48)HPS(0.535)MALNT(0.984)R;AAY(0.001)LNMSEDPS(0.427)HPS(0.658)MALNT(0.914)R;AAYLNMSEDPS(0.168)HPS(0.841)MALNT(0.99)R	46.92	0.025761000000000003	2940060000.0	3990.5499999999997	4111.549999999999	4222.72	4566.38	4443.5	3961.6600000000003	4833.619999999999	4451.71	4575.610000000001	4246.450000000001	True	False	3815.1302001496533	4790.913753099422	3336.4287788831625	4166.052555162317	5027.898135353006	4727.19472650975	5917.682327967872	4295.140836046749	4362.89088981157	3477.376756058185	1.0971288036313707	1.3777379010637345	0.9594671538166041	1.198044631748441	1.4458882335926206	1.359414023307704	1.7017662287119901	1.2351669483509027	1.2546500410721007	1.0	11.76378366885463	-7.637069867500796	6.191597504326819	1.3635813754200903	1.154210708785	0.1563447094973287	0.19317109408779068	0.34394261400297543	17.350513094519062	0.05656476527063771	0.07319457578100914	2.306376118617774e-08	7.637069867500796	-0.2093706666350903	
ACASPS(ph)AQVEGS(ph)PVAGSDGSQPAVK	ddPTM_K562_Methotrexat_30min_R1	1	ACASPSAQVEGSPVAGSDGSQPAVK	25	0	F8WDB4;Q9UFC0	F8WDB4	LRWD1	Leucine-rich repeat and WD repeat-containing protein 1	2	ACAS(0.43)PS(0.57)AQVEGS(0.996)PVAGS(0.003)DGS(0.001)QPAVK	63.008	0.011875	13157000.0	1194.9	995.97	1712.2	1386.7	1088.2	970.82	828.47	1175.0	1273.2	1528.5	True	False	1142.3736267328616	1160.5371139045933	1352.8326185974333	1265.130163990642	1231.3173738924586	1158.4172252011006	1014.2754867473133	1133.6745840036606	1214.0092098994646	1251.67383853217	0.9126767625602177	0.9271881205614617	1.0808188019523453	1.0107506644656343	0.983736606124497	0.9254944775066715	0.8103352930478659	0.9057268348223316	0.9699085916209014	1.0	10.289642958086725	-8.30443471059778	4.63188038367867	0.9082863508823544	0.9871815519884104	0.17129059767782684	0.06355938515903971	0.3201930223589468	16.024066105596894	0.023847732612722706	0.021396835180433244	4.9609550201203076e-09	8.30443471059778	0.07889520110605597	
ACDGNVDHAATHITNRR	ddPTM_K562_Methotrexat_30min_R1	1	ACDGNVDHAATHITNRR	17	1	H7C5E1;H7C5N1;H3BM14;H3BM74;Q9Y5A7-2;Q9Y5A7	H7C5E1	NUB1	NEDD8 ultimate buster 1	0		61.648999999999994	0.021258000000000003	1360200.0	241.06	228.25	270.78	238.52	214.46	272.28	243.85	214.44	352.56	218.9	False	True	230.46329103709402	265.9644329133642	213.94697842764432	217.60932192619018	242.6652490396772	324.89425648189757	298.5395698617118	206.898023654251	336.16956255274533	179.25508881563098	1.2856722370327358	1.4837204046514756	1.1935336388005975	1.213964542730542	1.3537425946622101	1.8124688042528079	1.6654454377513843	1.1542100423550685	1.8753697023268634	1.0	7.485870265493339	-8.020638156432014	24.194346022260074	1.5282416180673497	1.29847705881035	0.1203260028626314	0.26299833887133284	977.9935027726723	1146511.4966066568	0.08255896139140984	0.08355881405794707	9.53590341343307e-09	8.020638156432014	-0.22976455925699968	
ACPGPPPPS(ph)PEPLAR	ddPTM_K562_Methotrexat_30min_R1	4	ACPGPPPPSPEPLAR	15	0	A0A087WSV0;Q9HB09-3;Q9HB09	A0A087WSV0	BCL2L12	Bcl-2-like protein 12	1	ACPGPPPPS(1)PEPLAR;ACPGPPPPS(1)PEPLAR;ACPGPPPPS(1)PEPLAR;ACPGPPPPS(1)PEPLAR	186.08	5.8919e-06	251767000.0	6620.8	6139.3	7047.3	7298.300000000001	6297.08	5881.2	5905.4	6890.8	6770.26	7715.6	True	False	6329.757559522076	7153.714974742684	5568.168037052735	6658.4693703417515	7125.256394771852	7017.658664688322	7229.836275830843	6648.446658257383	6455.512090334551	6318.230074307369	1.001824480128	1.1322340102543518	0.8812860518795116	1.0538504125416295	1.1277298089770738	1.110700082484354	1.1442818939485055	1.0522640961260363	1.0217279229171203	1.0	12.625304757520654	-7.516428949430134	24.961556626400654	1.0844971746252805	1.0094503441912719	0.16168770405626476	0.07057524837038201	487.0174005140784	1884823.7855931371	0.020525209808218186	0.02751710915007878	3.0448860925896974e-08	7.516428949430134	-0.07504683043400862	
ACQSIYPLHDVFVR	ddPTM_K562_Methotrexat_30min_R1	1	ACQSIYPLHDVFVR	14	0	D6R9B6;H0Y9Y4;D6RAT0;P61247;D6RB09;D6RG13	D6R9B6	RPS3A	40S ribosomal protein S3a	0		109.99	0.0027453000000000004	7873700.0	4065.6	2256.2	2644.0	3792.1	2766.1	2353.4	2767.3	5851.0	6087.9	7578.2	False	True	3886.8810920119863	2628.998701157207	2089.060532397859	3459.6524806150683	3129.890634004716	2808.161242854774	3387.937468436802	5645.217013621626	5804.874857796855	6205.7145457405895	0.6263390079196958	0.4236415777392904	0.3366349703970392	0.5574946213066901	0.5043562044201624	0.4525121518491709	0.5459383352980968	0.909680419879501	0.9354079719604799	1.0	12.599381621084639	-9.251320048058096	3.0677398127950113	0.9608670312481683	0.4784960559414305	0.8894518826375956	0.0740978450171268	0.08118460683797173	1.5517592939768141	0.04524593174339911	0.02122049672857218	5.606346708309992e-10	9.251320048058096	-0.4823709753067378	
ACRPPGS(ph)PGRAPPPTPAPSGCDPR	ddPTM_K562_Methotrexat_30min_R1	1	ACRPPGSPGRAPPPTPAPSGCDPR	24	2	O95685	O95685	PPP1R3D	Protein phosphatase 1 regulatory subunit 3D	1	ACRPPGS(1)PGRAPPPTPAPSGCDPR	77.169	0.0037154	56370000.0	1032.8	935.16	1402.8	1204.0	905.84	794.28	1057.6	1108.8	1273.8	1428.7	True	False	987.3993486398025	1089.6792949978612	1108.3714503962613	1098.4471893305924	1024.9738374993062	947.7633687323406	1294.793721901768	1069.8028755261766	1214.5813160304267	1169.9485856139424	0.8439681544823225	0.9313907537449955	0.9473676570279642	0.9388850098520962	0.876084513544192	0.8100897598290545	1.1067099339432185	0.9144016144647815	1.038149309264785	1.0	10.192229415402716	-8.757660056756217	24.999833541865144	1.0076820090386314	0.897140259338564	0.5029548080558888	0.05981805360287453	92.00154521187032	608585.785019831	0.023452939867077575	0.01746393319802865	1.7471892271154935e-09	8.757660056756217	-0.11054174970006736	
ACSMPQELPQS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	ACSMPQELPQSPR	13	0	Q8N5J2;Q8N5J2-3	Q8N5J2	FAM63A	Protein FAM63A	1	ACSMPQELPQS(1)PR;ACSMPQELPQS(1)PR	81.789	0.02754	21750500.0	5035.4	4245.2	5473.6	5110.8	4403.9	3986.8	4237.5	4483.299999999999	4597.0	5261.5	True	False	4814.049845217717	4946.647143937851	4324.766161169788	4662.744099028899	4983.090041247015	4757.192675708935	5187.8672433422325	4325.61979784137	4383.286473380334	4308.591365022581	1.1173140911664263	1.1480891838792249	1.0037540798782902	1.0821968722495598	1.156547376875899	1.1041178595696328	1.204075022165636	1.0039522041837217	1.0173363176104684	1.0	12.07300056166436	-9.303112219315897	24.467448421653618	1.0079830944171055	1.1131918891675645	0.5053372169040522	0.04955944314014454	360.595419892982	211714.79781636823	0.028146162822650124	0.013521257336842856	4.976084890567763e-10	9.303112219315897	0.10520879475045897	
ADAASSLTVDVT(ph)PPTAK	ddPTM_K562_Methotrexat_30min_R1	2	ADAASSLTVDVTPPTAK	17	0	Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3	Q9H8Y8-2	GORASP2	Golgi reassembly-stacking protein 2	1	ADAASSLTVDVT(0.647)PPT(0.352)AK;ADAASSLTVDVT(0.993)PPT(0.007)AK	148.57	1.3319000000000001e-09	35021000.0	9573.0	6728.8	13268.6	10265.400000000001	7064.3	6348.700000000001	6378.1	8540.1	9035.7	12208.7	True	False	9152.182382386543	7840.6198299559455	10483.70218614759	9365.448320061685	7993.379272549624	7575.496423265109	7808.551283719427	8239.739842425246	8615.632279208763	9997.58612527818	0.9154392137964089	0.7842512914323889	1.0486233431528338	0.936770956779439	0.799530924003639	0.7577325494712178	0.781043662527304	0.8241729292625601	0.8617712487042002	1.0	13.28736408900222	-7.75930414526486	24.999630397307932	0.8217851491862181	0.9205806581986096	0.1708537443325765	0.08654026305187712	86.86490248570952	1017017.5594399116	0.02597408260160934	0.03190506816832396	1.7405874776209088e-08	7.75930414526486	0.09879550901239142	
ADADPSPT(ph)SPPTAR	ddPTM_K562_Methotrexat_30min_R1	1	ADADPSPTSPPTAR	14	0	Q9NWZ5;Q9NWZ5-3;Q9NWZ5-2	Q9NWZ5	UCKL1	Uridine-cytidine kinase-like 1	1	ADADPS(0.017)PT(0.483)S(0.483)PPT(0.017)AR	124.81	0.0020445	11343000.0	3365.9	3160.3	4475.9	3463.4	3242.3	3004.0	3024.4	3509.7	3222.2	3641.8	True	False	3217.939066214861	3682.485859084798	3536.4697567925764	3159.769099275396	3668.7192808045584	3584.480485058103	3702.698688085959	3386.2618616831046	3072.400625304789	2982.234730236478	1.079036144803965	1.2348075159036167	1.185845540908227	1.059530649026021	1.2301913204912764	1.2019444508225783	1.2415852617316785	1.1354779780914794	1.0302343387507802	1.0	11.54217810057335	-9.732278587063856	3.1632459121010292	1.003718835007911	1.1779684650625601	0.5384050999685419	0.05893332995437463	0.18451127007734638	3.5031926265057374	0.05277718408314033	0.01537093220926535	1.8523430189732862e-10	9.732278587063856	0.17424963005464922	
ADAPDAGAQS(ph)DSELPSYHQNDVSLDR	ddPTM_K562_Methotrexat_30min_R1	3	ADAPDAGAQSDSELPSYHQNDVSLDR	26	0	A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538	A0A669KB10	GBF1	Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1	1	ADAPDAGAQS(0.994)DS(0.006)ELPSYHQNDVSLDR;ADAPDAGAQS(0.989)DS(0.011)ELPSYHQNDVSLDR;ADAPDAGAQS(0.997)DS(0.003)ELPSYHQNDVSLDR	174.98	5.7325999999999995e-28	647570000.0	9392.0	8692.8	10958.599999999999	9218.3	8545.099999999999	7720.700000000001	7740.8	9961.7	9212.0	9735.900000000001	True	False	8979.138925663265	10129.137447663936	8658.539618129793	8410.145951334056	9668.930427907044	9212.616005655163	9476.871447141839	9611.341364654696	8783.736130689496	7972.634167200102	1.12624494456349	1.2704881768356835	1.0860324751575268	1.054876691311625	1.2127648434799136	1.1555297549656074	1.1886750662823913	1.2055415014771824	1.1017357558968799	1.0	12.960840755687826	-10.039548737302985	5.673583025949141	1.0000292335034153	1.162038755612901	0.41395915683746587	0.05961309532001624	0.23505552973797186	27.169355982348975	0.058640679161279095	0.015236242090528047	9.129589756561786e-11	10.039548737302985	0.16200952210948572	
ADAPDAGAQSDS(ph)ELPSYHQNDVSLDR	ddPTM_K562_Methotrexat_30min_R1	2	ADAPDAGAQSDSELPSYHQNDVSLDR	26	0	A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538	A0A669KB10	GBF1	Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1	1	ADAPDAGAQS(0.135)DS(0.865)ELPSYHQNDVSLDR;ADAPDAGAQS(0.432)DS(0.566)ELPS(0.001)Y(0.001)HQNDVSLDR	181.02	4.888299999999999e-26	348549200.0	4094.5	3555.34	4455.0	3715.4399999999996	3298.95	3083.04	3046.1299999999997	3551.61	3845.84	4204.21	True	False	3914.5106826158703	4142.799504552903	3519.956381177177	3389.7131437927387	3732.8197487617417	3678.7938464226127	3729.30219373736	3426.697863228289	3667.0477378257624	3442.786829372151	1.1370180254029107	1.203327336217448	1.0224148504190425	0.984584091839026	1.0842436473019978	1.06855115601029	1.0832219299553496	0.9953267608651809	1.0651393535435678	1.0	11.749361139479701	-6.765560593704764	24.99991160139249	1.0402275960848355	1.1701726972468112	0.659012825809483	0.03801980969198662	56.052585177170634	340032.1759009833	0.010008854907229118	0.02210460155227349	1.7156923163208805e-07	6.765560593704764	0.12994510116197566	
ADATNVNNWHWTER	ddPTM_K562_Methotrexat_30min_R1	1	ADATNVNNWHWTER	14	0	G3V3W9;O95433-2;O95433	G3V3W9	AHSA1	Activator of 90 kDa heat shock protein ATPase homolog 1	0		147.56	1.9957e-08	8503700.0	1507.3	1296.1	1399.9	1577.9	1188.3	1321.8	1317.5	1826.9	1968.8	2107.3	False	True	1441.0408967900594	1510.2584950668618	1106.0801207654167	1439.567956847793	1344.5822784381626	1577.2191428594542	1612.982912826759	1762.6468915032217	1877.2709177270387	1725.647549845497	0.8350725482263632	0.8751836348054273	0.6409652543849106	0.8342189904170654	0.779175491865965	0.9139868352611563	0.9347116756090633	1.021440845009769	1.0878646209622105	1.0	10.752922119971027	-8.73967227686091	1.2794458495018224	1.0446566337719636	0.7883268454198586	0.7283960143467674	0.0641888014004047	0.23656718975701832	0.7811058912810949	0.04099857093126215	0.024118057762501633	1.82107454206226e-09	8.73967227686091	-0.25632978835210496	
ADDADEFGYSR	ddPTM_K562_Methotrexat_30min_R1	1	ADDADEFGYSR	11	0	Q7KZF4	Q7KZF4	SND1	Staphylococcal nuclease domain-containing protein 1	0		89.679	0.010646	0.0	1899.0	1908.2	2217.9	1951.7	1590.0	1439.5	1487.0	1667.8	2181.1	2397.6	False	True	1815.5222337983969	2223.497616145811	1752.3930993968272	1780.5974912097336	1799.1128694072877	1717.6630020776104	1820.4976025604483	1609.1425286819604	2079.701137065443	1963.3714067809815	0.9246962788232774	1.1324895577405378	0.8925428440816193	0.9069081300970394	0.9163385303430686	0.8748538336380182	0.9272303733633465	0.8195813197260562	1.0592499869778529	1.0	10.939117394825967	-6.792657741145284	24.99943466639937	0.9155366574113547	1.028593178710568	0.2144971744262053	0.07808950693868778	215.53328625541255	172596.98722740423	0.01878087205259405	0.03910209931315217	1.611915453304302e-07	6.792657741145284	0.11305652129921329	
ADEGISFR	ddPTM_K562_Methotrexat_30min_R1	1	ADEGISFR	8	0	A0A0A0MSI0;Q06830	A0A0A0MSI0	PRDX1	Peroxiredoxin-1	0		139.97	2.8202e-05	37507000.0	3387.6	2754.4	3337.4	3004.6	2924.4	2364.1	2294.1	3928.0	3267.4	3732.1	False	True	3238.6851601977082	3209.5177832051268	2636.9253482695185	2741.1913829424407	3309.0098586758913	2820.9288664200603	2808.6103228203915	3789.8500135884037	3115.499287170524	3056.180525211587	1.0597165754707785	1.0501728404878583	0.8628172735597671	0.896933725062809	1.082727224841144	0.923024292298558	0.9189935933597851	1.2400609133932043	1.0194094430841354	1.0	11.577514048956994	-9.229713360580673	24.992870275004144	1.0973015162786628	0.9691858410548375	0.24718350478188988	0.09205768581384607	817.1327124832908	643715.9925221928	0.04334095799761411	0.025019950983035062	5.892324273134099e-10	9.229713360580673	-0.12811567522382528	
ADFREPNAEVPRPIPHIGPDYIPTEEERR	ddPTM_K562_Methotrexat_30min_R1	1	ADFREPNAEVPRPIPHIGPDYIPTEEERR	29	3	Q9NX40;D6RG39;Q9NX40-4;Q9NX40-2;Q9NX40-3;D6RIT9;D6RF07;D6R918;D6RA54;D6RDI5;D6RBC5;D6RC55	Q9NX40	OCIAD1	OCIA domain-containing protein 1	0		47.79600000000001	0.0059008	21409000.0	1021.4	806.23	957.76	1032.8	847.34	880.79	933.69	1041.0	1121.8	1186.2	False	True	976.5004789898275	939.4458039331503	756.7392645648155	942.2560275254459	958.7800621154533	1050.9902018756077	1143.093750191436	1004.3874399555827	1069.6477628536122	971.3676854869873	1.0052840892069277	0.9671371798436621	0.7790451297393431	0.9700302383984016	0.9870413402055647	1.0819694926836096	1.1767879117971225	1.033993054290293	1.1011770093189306	1.0	9.923873682762757	-8.014058384858478	2.2712945056613525	1.086966081320607	0.9210091942295279	0.4962562873894967	0.07072976587757429	0.25048568044376895	2.590094476712046	0.025952575318672545	0.028103525740817006	9.68147693507384e-09	8.014058384858478	-0.16595688709107914	
ADGYEPPVQES(ph)V	ddPTM_K562_Methotrexat_30min_R1	2	ADGYEPPVQESV	12	0	D6R9B6;H0Y9Y4;D6RAT0;P61247	D6R9B6	RPS3A	40S ribosomal protein S3a	1	ADGYEPPVQES(1)V;ADGYEPPVQES(1)V	182.1	0.00082956	37397000.0	2580.91	2695.0	3278.9	2972.8999999999996	2541.7	2431.04	2322.06	2668.1000000000004	2760.63	3778.7	True	False	2467.456286694375	3140.302942832492	2590.7036988197183	2712.270472725017	2875.9781007374227	2900.8040740331726	2842.8410645605336	2574.2614107065256	2632.2889138585933	3094.340813648354	0.7974093467051367	1.0148536092021314	0.8372392877322304	0.8765260958850681	0.9294315894526587	0.9374546143199418	0.9187226733466078	0.8319256234969691	0.8506784069318523	1.0	11.595416390008099	-5.931383053564651	12.739470529076941	0.9039461208781806	8.349196045650978e-05	0.2327373314504525	0.06061646641205384	566756.1120833564	3156327.13353524	0.014805258077410786	12858013.897126662	1.1711619293150456e-06	5.931383053564651	-0.9038626289177241	
ADHRS(ph)SPNVANQPPS(ph)PGGK	ddPTM_K562_Methotrexat_30min_R1	2	ADHRSSPNVANQPPSPGGK	19	1	A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6	A8MQ02	MLLT4	Afadin	2	ADHRS(0.73)S(0.27)PNVANQPPS(1)PGGK;ADHRS(0.701)S(0.299)PNVANQPPS(1)PGGK	121.84	0.00018173	23874000.0	10066.8	7365.7	13219.2	9983.5	6831.2	6964.5	6268.5	8318.2	8937.1	12319.599999999999	True	False	9624.275525645973	8582.756729506973	10444.67057105664	9108.262055383697	7729.622536789346	8310.291057985069	7674.370693779535	8025.644191199359	8521.616171687489	10088.401060635208	0.9539941431551284	0.8507549093182629	1.0353147647759158	0.9028449603301361	0.7661890611139777	0.8237470941169956	0.7607122920325616	0.7955318333363356	0.8446944288266561	1.0	13.30040991527352	-7.581878470480794	6.475733977544627	0.8183204476060094	0.9422684621591976	0.31277168082516027	0.07582663269232494	0.20997583735798017	17.512077536623273	0.021292446242069663	0.02767421735544056	2.6189157622810085e-08	7.581878470480794	0.12394801455318816	
ADLLQREEEEEEEEDQEGDRETTIR	ddPTM_K562_Methotrexat_30min_R1	2	ADLLQREEEEEEEEDQEGDRETTIR	25	2	A0A0B4J2E5;Q15269	A0A0B4J2E5	PWP2	Periodic tryptophan protein 2 homolog	0	;	97.77600000000001	5.6747e-06	23952000.0	1201.68	1108.31	1673.92	1373.1399999999999	1304.02	1381.85	1322.83	1151.22	1269.19	1391.5500000000002	False	True	1148.855586051005	1291.4393894510874	1322.5870674702815	1252.7589481373846	1475.5214867701188	1648.8729554852	1619.5083010054045	1110.7309400822924	1210.1856339242088	1139.526810604803	1.00818653441006	1.1333119830376408	1.1606458533154822	1.0993676818121407	1.2948545598387342	1.4469803958452387	1.4212112307790739	0.9747299754121387	1.0620071617989433	1.0	10.154219153163117	-9.29563868462145	24.75775330185368	1.0137763530968082	1.2241860148783794	0.3526650608288687	0.13115708522288216	749.2769810287219	542416.4668402288	0.08116743828698494	0.03899526756778048	5.062456626911631e-10	9.29563868462145	0.21040966178157117	
ADLNQGIGEPQS(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	2	ADLNQGIGEPQSPSR	15	0	Q96C19	Q96C19	EFHD2	EF-hand domain-containing protein D2	1	ADLNQGIGEPQS(0.856)PS(0.144)R;ADLNQGIGEPQS(0.989)PS(0.011)R	211.06	2.5418000000000005e-19	44255000.0	3852.6	3330.8	3958.3	3286.9	3322.0	2921.5	2806.8999999999996	3513.4	3420.0	3506.5	True	False	3683.2443169729886	3881.1580860803238	3127.5069233700624	2998.7425802414646	3758.901227780509	3486.0385276621987	3436.4187764807784	3389.8317305859223	3261.0049464783006	2871.4388713202843	1.2827173002918348	1.3516422462776552	1.0891776086920626	1.044334465968501	1.3090653836737156	1.21403891354975	1.1967584651734957	1.1805341790289554	1.1356692907688104	1.0	11.487558133872781	-15.99999999992291	0.13369420387044226	0.3207990538742368	1.2791710140791053	0.36505981013927025	0.08697043132870375	178.64505507172555	1.4888663359183327	32.37399857768623	0.6660205634803636	1.000000000177507e-16	15.99999999992291	0.9583719602048685	
ADLNQGIGEPQS(ph)PSRR	ddPTM_K562_Methotrexat_30min_R1	1	ADLNQGIGEPQSPSRR	16	1	Q96C19	Q96C19	EFHD2	EF-hand domain-containing protein D2	1	ADLNQGIGEPQS(0.955)PS(0.045)RR	90.45299999999999	0.0073884	22525000.0	3106.5	2228.3	3595.6	3351.2	2911.0	2678.6	2509.7	3070.7	3062.2	3350.0	True	False	2969.9419796180723	2596.4887003761196	2840.932696781293	3057.405499073655	3293.8475238016413	3196.2015403717137	3072.564111059822	2962.7017405106717	2919.838990381825	2743.2825378362904	1.0826234405882798	0.9464897124391891	1.0355960997812579	1.1145062372923216	1.2006956915198381	1.1651011138257215	1.1200319575843785	1.0799841794084557	1.0643595583431191	1.0	11.421687501432253	-7.195518098624717	4.246662422043227	1.116831525390465	1.0104697646249614	0.2830784744843071	0.060492405891764744	0.24494266823560468	8.782385717301796	0.01701607650794051	0.030247587352990143	6.375025134416157e-08	7.195518098624717	-0.10636176076550363	
ADPSLLGFSVNAS(ph)SER	ddPTM_K562_Methotrexat_30min_R1	2	ADPSLLGFSVNASSER	16	0	I1E4Y6;Q6Y7W6;Q6Y7W6-4;Q6Y7W6-5;Q6Y7W6-3	I1E4Y6;Q6Y7W6-3	GIGYF2	PERQ amino acid-rich with GYF domain-containing protein 2	1	ADPSLLGFS(0.009)VNAS(0.794)S(0.197)ER;ADPSLLGFSVNAS(0.946)S(0.054)ER	184.22	3.3672e-08	10808200.0	1166.83	715.46	1159.81	1224.23	874.79	982.18	1038.8600000000001	837.14	1115.6	1389.38	True	False	1115.537550322793	833.6776042593458	916.3817307414375	1116.9036566396937	989.8402182571068	1171.9723844255554	1271.8507998627747	807.6973117045314	1063.7359995003483	1137.7498186325327	0.9804770188085491	0.7327424628916638	0.8054334228265063	0.9816777276942183	0.869998133198387	1.030079166115935	1.1178650868882745	0.7099076602581286	0.9349471932053199	1.0	10.151967640989753	-7.257083332945042	24.356926947444716	0.9442197903352894	0.8288701109663228	0.15455733513271486	0.1163230516597825	485.08767672887507	2712361.3089044327	0.03249022304350775	0.05382053808115071	5.53243941920495e-08	7.257083332945042	-0.11534967936896656	
ADRDQS(ph)PFSK	ddPTM_K562_Methotrexat_30min_R1	2	ADRDQSPFSK	10	1	Q13427;E9PG73	Q13427	PPIG	Peptidyl-prolyl cis-trans isomerase G	1	ADRDQS(0.971)PFS(0.029)K;ADRDQS(0.788)PFS(0.212)K	109.16	0.0022730999999999997	219300000.0	14314.300000000001	10375.3	21357.7	14357.9	9709.0	10209.9	9678.0	13220.7	13729.6	16024.0	True	False	13685.060511458862	12089.641975053792	16875.01064023968	13099.165199077834	10985.903678663739	12182.818676562822	11848.537859838609	12755.720487435903	13091.313892739308	13121.898324265285	1.0429177374551184	0.9213333068354429	1.2860190060331487	0.9982675429556246	0.8372190827258873	0.9284341621542748	0.9029591273335846	0.9720941415807012	0.9976692067892784	1.0	13.679688827012463	-7.518690710557999	24.99902725294697	0.9342773183549808	1.079702500620635	0.3158261794600361	0.09444776754080333	207.91760648904614	1241097.1146849757	0.027691062329412375	0.036635568598478746	3.029069858461753e-08	7.518690710557999	0.14542518226565426	
ADREVQAEQPSSS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	1	ADREVQAEQPSSSSPR	16	1	A0A1W2PP04;Q9Y388	A0A1W2PP04	RBMX2	RNA-binding motif protein, X-linked 2	1	ADREVQAEQPSS(0.003)S(0.499)S(0.499)PR	106.31	0.00081801	72401000.0	2325.8	2445.6	3014.4	2632.9	2388.5	2170.2	2267.0	2452.4	2092.8	2413.3	True	False	2223.560616834288	2849.693831907662	2381.7186342133514	2402.077744840962	2702.6296154586826	2589.560435643508	2775.4324579721156	2366.147701966447	1995.5061847923334	1976.2279846448716	1.12515389626661	1.4419863771030206	1.2051841451083116	1.2154861501329342	1.3675697523048411	1.310355108704147	1.4044090456855165	1.1973050277352713	1.0097550486569626	1.0	10.948533675584466	-9.651408298254433	3.407099271107211	0.9993028070278701	1.2985035452293148	0.6127128368356147	0.09124703303613885	0.15200815332230674	3.2631552405378734	0.07270967859064957	0.02299442350286214	2.2314733357283362e-10	9.651408298254433	0.29920073820144466	
ADREVQAEQPSSSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	ADREVQAEQPSSSSPR	16	1	A0A1W2PP04;Q9Y388	A0A1W2PP04	RBMX2	RNA-binding motif protein, X-linked 2	1	ADREVQAEQPSS(0.004)S(0.252)S(0.744)PR;ADREVQAEQPS(0.004)S(0.011)S(0.056)S(0.929)PR;ADREVQAEQPS(0.001)S(0.036)S(0.168)S(0.795)PR;ADREVQAEQPS(0.001)S(0.001)S(0.206)S(0.792)PR	231.21	1.5377e-40	107619600.0	7354.799999999999	5956.2	8529.5	8187.900000000001	6903.4	6316.6	5856.11	6997.5	7557.299999999999	7894.4	True	False	7031.491798388858	6940.360811910537	6739.274512514195	7470.079519534849	7811.318102305829	7537.193552569242	7169.491738621565	6751.393958779243	7205.962772520594	6464.6476616999435	1.0876836861577477	1.0735868642971798	1.0424813331190945	1.1555277117098934	1.2083130452080608	1.16590941177253	1.109030547959713	1.0443560596160777	1.114672159971316	1.0	12.658356026612516	-10.280765803760344	0.91736964808995	1.0019530293237182	1.1188746972426968	0.31132378036878094	0.0502802863134763	1.3925409148118373	2.255750063724542	0.05538662393932401	0.018594366211237178	5.238828678107246e-11	10.280765803760344	0.11692166791897862	
ADS(ph)LLAVVK	ddPTM_K562_Methotrexat_30min_R1	1	ADSLLAVVK	9	0	Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151	Q15424-2;Q14151	SAFB;SAFB2	Scaffold attachment factor B1;Scaffold attachment factor B2	1	ADS(1)LLAVVK	95.48299999999999	0.010081999999999999	5799000.0	1944.9	1281.4	2115.6	1819.0	1252.8	1310.2	1277.6	1698.2	1663.4	1979.4	True	False	1859.404524757504	1493.129569924139	1671.5644713846102	1659.5310941796904	1417.5651589895897	1563.3776070316667	1564.1343221460857	1638.4733434510765	1586.0688970678366	1620.9114792218359	1.1471351450050582	0.9211666331346842	1.0312496967367346	1.0238258630732846	0.8745481645118164	0.9645052349078372	0.9649720803365476	1.0108345609580554	0.9785043275955289	1.0	10.662589589598479	-6.2503194753398	24.838677138304206	0.9743361031567971	1.1471352546720053	0.5651100654450498	0.04545932230536871	1174.8248701981522	2624170.246953699	0.011510987484664614	0.1719197983815725	5.619278082540269e-07	6.2503194753398	0.1727991515152082	
ADS(ph)PVNGLPK	ddPTM_K562_Methotrexat_30min_R1	3	ADSPVNGLPK	10	0	Q96S94;Q96S94-3;A0A0A0MSF3	Q96S94	CCNL2	Cyclin-L2	1	ADS(1)PVNGLPK;ADS(1)PVNGLPK;ADS(1)PVNGLPK	112.64	0.0026099	151137000.0	18345.4	12790.7	28831.4	20421.2	13555.3	12502.800000000001	11506.0	15703.3	15973.899999999998	21497.3	True	False	17538.95818216172	14904.145770273688	22780.083144393197	18630.90510195839	15338.059546337478	14918.789150660594	14086.513392777746	15151.00603828482	15231.276875599331	17603.9306569039	0.9963092063921135	0.846637382341005	1.2940339057436197	1.0583377920005457	0.8712860693030625	0.8474692068165897	0.8001913701729622	0.8606604021325719	0.8652202268034916	1.0	14.103609973530544	-7.770905612557035	8.231284633819042	0.8618622541991888	1.0520969985702486	0.36266255491959554	0.11272828126907058	0.14673388565749684	70.59462225997765	0.035403491940663126	0.04196496682550388	1.6947060795735903e-08	7.770905612557035	0.1902347443710598	
ADSGPTQPPLSLS(ph)PAPETK	ddPTM_K562_Methotrexat_30min_R1	2	ADSGPTQPPLSLSPAPETK	19	0	F1T0I1;O15027-2;O15027-4;O15027-3;O15027;O15027-5;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09	F1T0I1	SEC16A	Protein transport protein Sec16A	1	ADSGPTQPPLS(0.004)LS(0.958)PAPET(0.038)K;ADSGPTQPPLS(0.026)LS(0.972)PAPET(0.002)K	174.2	7.614500000000001e-58	0.0	3954.0	2720.2	6253.1	4198.4	2547.6	2687.8599999999997	2303.98	3862.5	3792.2	4813.200000000001	True	False	3780.1868943859176	3169.6668145057333	4940.659763667565	3830.332790436514	2882.6540541522054	3207.2509043169994	2820.7061643222723	3726.6536857141605	3615.901449717838	3941.4828391384	0.959077344406822	0.804181305327874	1.2535027971218018	0.9717999409769895	0.731362832669937	0.8137168256752065	0.7156459331277649	0.9454953472609308	0.9173962179442767	1.0	11.944522777848059	-7.582434172127044	9.839183761180156	0.8428552420396296	1.006534630274772	0.22044759348976017	0.13207725147254717	0.5559987251013686	87.70366292457571	0.039757106244764674	0.051352983571034	2.6155668707560383e-08	7.582434172127044	0.1636793882351424	
ADSGYLFSGSRPPS(ph)QVSR	ddPTM_K562_Methotrexat_30min_R1	1	ADSGYLFSGSRPPSQVSR	18	1	Q5SNT2;H0Y994	Q5SNT2	TMEM201	Transmembrane protein 201	1	ADSGYLFS(0.014)GS(0.003)RPPS(0.92)QVS(0.063)R	98.07700000000001	0.003078	5045700.0	1391.0	1385.8	1527.3	1353.9	1418.3	1070.9	1383.8	1571.9	1454.1	1431.0	True	False	1329.8533055363716	1614.779895427558	1206.740601789428	1235.205689065357	1604.831309861859	1277.8362687911858	1694.152375536751	1516.615386038598	1386.499208384238	1171.8320333264865	1.1348497632048078	1.3779960348444076	1.02978973732596	1.05408083576532	1.3695062638851192	1.0904602643126118	1.4457297013186698	1.2942259154098843	1.1831893726683462	1.0	10.194550077926422														
ADSGYLFSGSRPPSQVS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	ADSGYLFSGSRPPSQVSR	18	1	Q5SNT2;H0Y994	Q5SNT2	TMEM201	Transmembrane protein 201	1	ADSGYLFSGSRPPS(0.107)QVS(0.893)R	92.096	0.007718600000000001	12193000.0	660.24	643.38	1056.8	916.96	741.89	825.1	885.04	696.86	715.47	1023.9	True	False	631.2166401490541	749.6876094098587	834.9921220264961	836.5715404722426	839.461538795328	984.5388975437552	1083.5327492737722	672.351038815992	682.2079558645702	838.4617882061423	0.7528269612614292	0.8941225705870119	0.9958618672568617	0.9977455767686877	1.0011923627328618	1.1742203537386473	1.292286380267788	0.8018863212054802	0.8136422738168291	1.0	9.711601226132414	-6.346035102904001	1.4151326460584515	1.0224314135374697	0.6673238682884888	0.25520649939860207	0.1376665814968961	1.5807308349820914	3.2542205075140576	0.04408290815844835	0.7635321293028929	4.5078026766134224e-07	6.346035102904001	-0.3551075452489809	
ADT(ph)QTQVAPT(ph)PT(ph)MR	ddPTM_K562_Methotrexat_30min_R1	1	ADTQTQVAPTPTMR	14	0	Q702N8-2;Q702N8	Q702N8-2	XIRP1	Xin actin-binding repeat-containing protein 1	3	ADT(0.57)QT(0.43)QVAPT(1)PT(1)MR	69.26100000000001	0.021661	3924900.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
ADVVPQQADPEFPRAS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	5	ADVVPQQADPEFPRASPR	18	1	Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3	Q5T5Y3-2	CAMSAP1	Calmodulin-regulated spectrin-associated protein 1	1	ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR	121.92	8.6974e-05	476220000.0	20433.300000000003	17792.6	23209.600000000002	22772.600000000002	17043.7	17652.9	17559.7	20185.0	19790.4	22883.300000000003	True	False	19535.076598142583	20732.524727510725	18338.222137950575	20776.161514742413	19285.245290765397	21064.07308744413	21497.90971868237	19475.082109033097	18870.348623621085	18738.9126262893	1.0424872023116392	1.1063888893117808	0.9786171964014291	1.1087175616366878	1.029154982221841	1.1240819308743029	1.1472335747231355	1.0392856030349917	1.0070140674623451	1.0	14.19374961887662	-9.5161173213079	15.533137857372031	1.0100486409420606	1.0765545253349156	0.279410602813987	0.04721031264479751	3.116862508586583	7183.772727433042	0.029371692317657714	0.012278623523869478	3.0470717354844827e-10	9.5161173213079	0.06650588439285499	
ADY(ph)DTLSLR	ddPTM_K562_Methotrexat_30min_R1	1	ADYDTLSLR	9	0	Q9Y446;Q9Y446-2;E9PKC4;E9PK71;E9PJR7;E9PRW6;E9PQ15	Q9Y446	PKP3	Plakophilin-3	1	ADY(0.967)DT(0.033)LSLR	141.2	6.185e-21	0.0	1508.1	1271.8	2018.4	1482.4	1451.2	1496.1	1083.3	1551.7	1571.7	1217.0	True	False	1441.8057297479527	1481.943333096239	1594.7654230680166	1352.4402935744781	1642.058236530727	1785.2001510304349	1326.2576011121278	1497.1258314880672	1498.632010052614	996.5895070288856	1.4467398257547204	1.4870147865737922	1.6002229722671495	1.3570685663814424	1.6476776295048157	1.791309399145311	1.3307962724452878	1.5022492419686633	1.50376057492363	1.0	9.960855573913484	-11.318747586930934	0.7521735187967885	0.9713242874715244	1.530186981963037	0.595947059845694	0.12834790058726075	7.838702508716428	3.62652295786646	0.8067753675605479	0.04590696258737984	4.800123519918258e-12	11.318747586930934	0.5588626944915125	
ADYDTLS(ph)LR	ddPTM_K562_Methotrexat_30min_R1	4	ADYDTLSLR	9	0	Q9Y446;Q9Y446-2;E9PKC4;E9PK71;E9PJR7;E9PRW6;E9PQ15	Q9Y446	PKP3	Plakophilin-3	1	ADYDTLS(1)LR;ADYDT(0.035)LS(0.965)LR;ADYDTLS(1)LR;ADYDT(0.002)LS(0.998)LR	108.31	0.0052115	27248000.0	9869.800000000001	7136.52	8573.3	10030.5	7733.91	7925.63	8198.99	10294.7	11703.7	14336.3	True	False	9435.935409764837	8315.708629900902	6773.88149107661	9151.14163835591	8751.054724426234	9457.145827826584	10037.822218168858	9932.62956590849	11159.597541549148	11739.857148412659	0.8037521488104875	0.7083313301665912	0.5769986300039863	0.7794934403944798	0.745414072232511	0.8055588503566485	0.8550208142461144	0.8460605133727267	0.9505735376906211	1.0	13.519127233267389	-9.12425247647656	0.6003212362573245	0.9970798745418274	0.6990147822636378	0.7322971438569242	0.0587407808069761	0.4131905077987634	0.3051326709944803	0.05779815749692976	0.034717775375529066	7.511860661095861e-10	9.12425247647656	-0.29806509227818967	
AEAPAGPALGLPS(ph)PEAESGVDR	ddPTM_K562_Methotrexat_30min_R1	1	AEAPAGPALGLPSPEAESGVDR	22	0	Q53F19	Q53F19	C17orf85	Uncharacterized protein C17orf85	1	AEAPAGPALGLPS(0.996)PEAES(0.004)GVDR	126.61	3.2719999999999997e-07	7829600.0	1031.3	963.91	1074.3	930.8	987.3	865.07	808.32	1138.9	1110.7	1191.3	True	False	985.9652868437528	1123.1797438314172	848.8191111781467	849.1982091602287	1117.147255324412	1032.2325343572618	989.6063363158449	1098.8442414653348	1059.063799430832	975.5440260669762	1.0106825120120833	1.1513368067658127	0.8700982103291265	0.8704868119421263	1.1451530894288044	1.0581096360344002	1.014414839180106	1.1263912361756325	1.0856135357627843	1.0	9.930063172558016	-7.777015339117538	24.99978832587364	1.0743981172847632	0.9806605331448791	0.23459903109413738	0.08463318166192847	395.644341466919	635015.9338975141	0.027852325777702715	0.0316883498915192	1.6710315930618817e-08	7.777015339117538	-0.09373758413988409	
AEAPAGPALGLPS(ph)PEAESGVDRGEPEPMEVEEGELEIVPVRR	ddPTM_K562_Methotrexat_30min_R1	2	AEAPAGPALGLPSPEAESGVDRGEPEPMEVEEGELEIVPVRR	42	2	Q53F19	Q53F19	C17orf85	Uncharacterized protein C17orf85	1	AEAPAGPALGLPS(0.915)PEAES(0.085)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(0.636)PEAES(0.364)GVDRGEPEPMEVEEGELEIVPVRR	57.184	0.00024472	138046000.0	1376.26	1062.02	1398.6100000000001	1332.54	1007.53	1028.21	862.0699999999999	1159.24	1482.97	1419.4899999999998	True	False	1315.7612582871943	1237.5007537465542	1105.0608741365236	1215.7182871018172	1140.0378549144182	1226.8970304732331	1055.4111420573545	1118.4688721365126	1414.0270483856496	1162.4066058606675	1.1319285795979972	1.0646023065485641	0.950666374885504	1.0458631953503712	0.9807565176991686	1.0554800912928535	0.9079534964238339	0.9622010632917708	1.2164650830925703	1.0	10.182899091485453	-6.495964760984356	4.70063722405856	1.010668555099796	1.1209758994856738	0.17030600288175468	0.07958690798430022	0.3185545776452729	17.43175696467397	0.019712259293741072	0.07489442342958948	3.1917968296446077e-07	6.495964760984356	0.11030734438587775	
AEAPAGPALGLPSPEAES(ph)GVDRGEPEPMEVEEGELEIVPVRR	ddPTM_K562_Methotrexat_30min_R1	2	AEAPAGPALGLPSPEAESGVDRGEPEPMEVEEGELEIVPVRR	42	2	Q53F19	Q53F19	C17orf85	Uncharacterized protein C17orf85	1	AEAPAGPALGLPS(0.276)PEAES(0.724)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(0.317)PEAES(0.683)GVDRGEPEPMEVEEGELEIVPVRR	56.95399999999999	0.00025233	175766000.0	1712.65	1370.05	1813.8600000000001	1618.3	1617.65	1445.44	1355.29	1731.24	1714.55	1906.5099999999998	True	False	1637.3639566692066	1596.4274756317834	1433.155573863532	1476.4261515728385	1830.3993290545259	1724.7508230101134	1659.248282295999	1670.3513079238269	1634.8409447322715	1561.2225645403769	1.0487703635972272	1.0225495787026182	0.9179700616775625	0.945685890728525	1.1724140879256344	1.1047437195592156	1.062787792068891	1.0698995427442963	1.0471543147427977	1.0	10.608460504149878	-7.739121519161079	24.999996917518093	1.0804215099660481	0.9818176557613312	0.41627518911142714	0.053454651246257576	236.03611341172365	264401.7801325057	0.016518582802328673	0.02130987692566444	1.8233854327222475e-08	7.739121519161079	-0.09860385420471696	
AEAPPLEREDS(ph)GTFSLGK	ddPTM_K562_Methotrexat_30min_R1	2	AEAPPLEREDSGTFSLGK	18	1	G5E9Q4;O75569	G5E9Q4	PRKRA	Interferon-inducible double-stranded RNA-dependent protein kinase activator A	1	AEAPPLEREDS(0.894)GT(0.095)FS(0.011)LGK;AEAPPLEREDS(0.904)GT(0.089)FS(0.007)LGK	75.868	0.011319	71027000.0	5661.8	4603.1	7817.900000000001	5890.8	4915.2	4093.3999999999996	4160.3	5767.4	5915.9	7748.400000000001	True	False	5412.914051247899	5363.6840356780185	6177.029627924812	5374.362710057025	5561.63495327717	4884.391617022916	5093.3531781655865	5564.557273006559	5640.871100254668	6345.089676468867	0.853087084225461	0.8453283261810391	0.9735133690596501	0.8470113086010684	0.876525823410001	0.7697907935228978	0.8027235922377239	0.876986387385988	0.889013613341694	1.0	12.631424838780898	-10.212407810301487	1.94746824054117	0.9997087990222947	0.854743598472072	0.4305338901688385	0.050024432326332594	0.8407185511705701	5.509796802176623	0.05162271401420767	0.014388438374750956	6.131859421518071e-11	10.212407810301487	-0.14496520055022266	
AEASS(ph)PVPYLSPETNPASSTSAVNHNVNLTNVR	ddPTM_K562_Methotrexat_30min_R1	2	AEASSPVPYLSPETNPASSTSAVNHNVNLTNVR	33	0	G3V1L9;Q07157	G3V1L9	TJP1	Tight junction protein ZO-1	1	AEAS(0.165)S(0.596)PVPY(0.095)LS(0.11)PET(0.031)NPAS(0.001)S(0.001)TSAVNHNVNLTNVR;AEAS(0.079)S(0.28)PVPY(0.276)LS(0.276)PET(0.089)NPASSTSAVNHNVNLTNVR	96.669	6.680599999999999e-10	123557000.0	2302.5	1816.39	2453.6	2284.9	1784.3200000000002	1790.76	1967.94	2271.5	2448.68	2641.8999999999996	True	False	2201.284856935655	2116.517574148985	1938.622890427907	2084.586364536107	2018.9893554344708	2136.7990257731853	2409.3006402036353	2191.6100575015435	2334.8414012697313	2163.4263094655807	1.0174993468945224	0.9783173870487952	0.896089172044318	0.9635578320442312	0.9332369429921606	0.9876920773423649	1.1136504301821084	1.0130273667804865	1.079233154859106	1.0	11.079102265242016	-8.558149708847719	8.86640174665691	1.0525067082107247	0.9562229972914152	0.5328575560383821	0.0414862565099961	0.21677649941789076	50.09247597179555	0.01553434039683967	0.012061359951520786	2.765987996968368e-09	8.558149708847719	-0.09628371091930943	
AEAVKPQRRAK	ddPTM_K562_Methotrexat_30min_R1	1	AEAVKPQRRAK	11	3	Q9HCE0-2;Q9HCE0	Q9HCE0-2	EPG5	Ectopic P granules protein 5 homolog	0		64.836	0.031173000000000003	0.0	1028.4	914.34	1037.3	1017.9	1080.0	958.05	1094.9	1258.4	1118.6	1399.2	False	True	983.1927673713913	1065.4191438773507	819.5849055432286	928.6622873917028	1222.038930163441	1143.1796034320619	1340.4591963977373	1214.1413587320894	1066.5965301551537	1145.7913214747866	0.8580906042348887	0.9298544367625458	0.7153003257943281	0.8104986222066949	1.0665458074778515	0.9977205988614374	1.1698981928684773	1.0596531287820605	0.9308820115536408	1.0	10.162128600234045	-7.760740016815529	24.999897726904017	1.0450685747833541	0.827599022152336	0.6436361147115124	0.07606401133779364	11.926658963877609	426325.7714408597	0.023821495435442003	0.0289469113302345	1.734842221471598e-08	7.760740016815529	-0.21746955263101808	
AEDGSVIDYELIDQDAR	ddPTM_K562_Methotrexat_30min_R1	1	AEDGSVIDYELIDQDAR	17	0	P07355;H0YN42;H0YMU9;H0YMD0;P07355-2;H0YN28;H0YM50;H0YNA0;H0YNP5;H0YL33	P07355	ANXA2	Annexin A2;Annexin	0		161.87	8.672499999999999e-08	2966800.0	1272.8	1166.1	1378.3	1362.4	1051.5	934.14	962.75	1518.2	1285.4	1487.6	False	True	1216.8492360076878	1358.7782046890436	1089.0136655839508	1242.960507262459	1189.7906806174606	1114.649334324959	1178.6711949327976	1464.804045476049	1225.6420345623412	1218.1812248612725	0.9989065757816646	1.1154154874154971	0.8939668773075767	1.0203412118783954	0.9766943180009648	0.9150110932401673	0.9675663775453653	1.2024516677663144	1.0061245482599834	1.0	10.25051305892438														
AEDS(ph)DS(ph)EPEPEDNVR	ddPTM_K562_Methotrexat_30min_R1	1	AEDSDSEPEPEDNVR	15	0	Q9H0D6-2;Q9H0D6	Q9H0D6-2	XRN2	5-3 exoribonuclease 2	2	AEDS(1)DS(1)EPEPEDNVR	161.94	5.3e-06	7493800.0	3460.7	3018.0	4290.9	3263.5	2637.4	2934.0	2611.7	3166.2	3400.9	3820.2	True	False	3308.571771725177	3516.6732027712283	3390.298728617992	2977.3940219106225	2984.264328160239	3500.9539757524863	3197.4402075367334	3054.8429513807564	3242.7929013093694	3128.3247615051314	1.0576177423898032	1.1241394263296534	1.0837425737687212	0.9517534939301214	0.9539496553818215	1.1191146196944308	1.0220934369992802	0.9765108114641459	1.0365908748390829	1.0	11.611174575917385	-7.114359881981721	7.781890912087058	1.010602467954015	1.0940251383984734	0.3703664859190148	0.047717185013916516	0.29993144088634544	18.368147801758383	0.013526245787747396	0.023572807410389487	7.684933575111131e-08	7.114359881981721	0.08342267044445828	
AEEDEILNRS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	16	AEEDEILNRSPR	12	1	P27824-3;P27824;P27824-2	P27824-3	CANX	Calnexin	1	AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR	231.07	7.9158e-35	22117223000.0	70756.5	61448.69999999999	90016.0	76301.5	64824.59999999999	60874.7	59151.09999999999	75176.4	74469.5	82941.5	True	False	67646.12898144082	71602.05322568877	71122.8717414241	69612.26596072115	73350.17114099355	72637.87422895021	72417.23990505276	72532.40340161097	71007.4291993467	67919.99063043247	0.9959678785811119	1.0542117653592034	1.047156677750726	1.0249157179584538	1.0799496651892648	1.0694623711623987	1.066213926605067	1.067909502465565	1.0454569934456215	1.0	16.05154863942053	-6.261184125021111	24.42342246852426	1.0537949289637898	0.9959678733098114	0.33591361790112517	0.022637703483699072	15.627602392157442	1494108.2079384162	0.005464341740984127	0.03012816478341335	5.480445647520938e-07	6.261184125021111	-0.05782705565397839	
AEEDEILNRSPR	ddPTM_K562_Methotrexat_30min_R1	1	AEEDEILNRSPR	12	1	P27824-3;P27824;P27824-2	P27824-3	CANX	Calnexin	0		104.07	0.013881000000000001	21937000.0	1928.6	1572.8	2230.7	1801.9	1585.2	1893.5	1809.2	1629.4	1772.9	2414.4	False	True	1843.8210532404362	1832.678466971038	1762.5065543191752	1643.930224630228	1793.6815852732266	2259.3920767168834	2214.9591543728056	1572.0930784472876	1690.478265968239	1977.1287639856534	0.9325750992178754	0.926939357898258	0.8914475305928857	0.831473525940851	0.9072153609547314	1.1427642538375806	1.1202907947723721	0.7951394502390109	0.8550167782499094	1.0	10.949191116839076	-8.03052422964258	24.988936903991842	0.9836135383333867	0.8940238462037551	0.14920865723666688	0.10140343059906366	1484.6060203552813	1215382.2124724353	0.03722828400943308	0.037275383183672496	9.321284646852788e-09	8.03052422964258	-0.08958969212963164	
AEENTDQAS(ph)PQEDYAGFER	ddPTM_K562_Methotrexat_30min_R1	2	AEENTDQASPQEDYAGFER	19	0	Q9NU22	Q9NU22	MDN1	Midasin	1	AEENTDQAS(1)PQEDYAGFER;AEENT(0.001)DQAS(0.999)PQEDYAGFER	325.11	1.4692999999999992e-283	128816000.0	1752.15	1404.59	2735.3	1961.0300000000002	1746.08	1526.71	1497.03	2196.04	1751.1100000000001	2052.48	True	False	1675.1275839651723	1636.6746235521684	2161.1979100861804	1789.1095445954923	1975.7201251664621	1821.7251003139322	1832.7770853806778	2118.80402847268	1669.701278312168	1680.755983062158	0.9966512693373065	0.9737728974614874	1.2858487084774248	1.064467158008223	1.1754949231636296	1.0838724470847598	1.0904480506691718	1.2606256052781946	0.9934227782846564	1.0	10.714894569866678														
AEFT(ph)SPPSLFK	ddPTM_K562_Methotrexat_30min_R1	1	AEFTSPPSLFK	11	0	Q6UN15-5;Q6UN15;Q6UN15-3;A0A0B4J203;Q6UN15-4	Q6UN15-5	FIP1L1	Pre-mRNA 3-end-processing factor FIP1	1	AEFT(0.443)S(0.443)PPS(0.115)LFK	128.88	0.0026721	45798000.0	6295.2	4950.3	8565.1	6686.3	4740.2	4398.6	4108.7	5431.3	5697.2	7516.1	True	False	6018.470545659641	5768.252934287088	6767.402559016976	6100.122460150449	5363.619385889574	5248.5671975953965	5030.1805646537405	5240.278100509852	5432.338415519345	6154.861457501894	0.9778401329121695	0.9371864783822899	1.0995215092564727	0.9911063802606433	0.8714443733501249	0.8527514768343235	0.8172695030401816	0.8514047207549578	0.8826093735868098	1.0	12.587510667476696	-7.747667836221931	5.333344714769464	0.8668143299076527	1.0051591106889297	0.4987815714985654	0.05931892149777508	0.13298220853086248	10.988523013573849	0.01782204201094004	0.022076674668216837	1.7878544663831716e-08	7.747667836221931	0.138344780781277	
AEGEWEDQEALDYFS(ph)DKESGK	ddPTM_K562_Methotrexat_30min_R1	3	AEGEWEDQEALDYFSDKESGK	21	1	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	AEGEWEDQEALDY(0.009)FS(0.878)DKES(0.113)GK;AEGEWEDQEALDY(0.018)FS(0.978)DKES(0.004)GK;AEGEWEDQEALDY(0.135)FS(0.607)DKES(0.258)GK	91.618	0.0004744	71236000.0	3833.22	2457.08	6696.9	3976.59	2364.71	1989.2799999999997	1751.73	3217.6	2993.4599999999996	5926.5199999999995	True	False	3664.7162385680294	2863.0707067810235	5291.312208553412	3627.9685287542693	2675.710813469249	2373.6802061639096	2144.6000439362574	3104.43518424696	2854.2946979780495	4853.169798847021	0.755118075497516	0.5899382930020726	1.0902796374053265	0.7475461768545939	0.5513326185506477	0.48909894039310764	0.44189676702549224	0.639671660568004	0.588129988498682	1.0	12.244711621514481	-7.652667076312921	5.190939251238356	0.5857354104749982	0.808728054191061	0.17499796124918532	0.18345306418269353	0.30423934637331973	12.693159702267153	0.05366706990938747	0.06952245114110085	2.2250149003624793e-08	7.652667076312921	0.22299264371606276	
AEGEYSDGY(ph)RS(ph)S(ph)S(ph)LLR	ddPTM_K562_Methotrexat_30min_R1	1	AEGEYSDGYRSSSLLR	16	1	Q9NUT2	Q9NUT2	ABCB8	ATP-binding cassette sub-family B member 8, mitochondrial	4	AEGEY(0.123)S(0.135)DGY(0.941)RS(0.934)S(0.934)S(0.934)LLR	43.042	0.03295	7259000.0	261.31	325.79	523.66	390.25	272.24	397.37	345.48	314.78	363.8	415.12	True	False	249.82312528375934	379.6212600168452	413.7509222373154	356.0373884022124	308.0443318034213	474.15612861103136	422.9626844200293	303.70900898099757	346.8870174060833	339.93774540495536	0.7349084609187904	1.116737594304558	1.2171373371451562	1.0473605629703702	0.906178663497516	1.3948322450811885	1.2442357170904024	0.8934253788710641	1.0204427784059389	1.0	8.409126751963779	-6.259851954914521	23.91283420425261	1.1007569074799957	0.7349082332202391	0.3423969601594373	0.1487167794437575	90.59496364867782	1364472.8191184937	0.03866546957818931	0.23684728790640416	5.497282368044932e-07	6.259851954914521	-0.36584867425975653	
AEHS(ph)YLR	ddPTM_K562_Methotrexat_30min_R1	1	AEHSYLR	7	0	H3BTE0;P98161-2;P98161-3;P98161	H3BTE0	PKD1	Polycystin-1	1	AEHS(1)YLR	82.45200000000001	0.021906000000000002	4312200.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
AEIMRSFSSS(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	AEIMRSFSSSR	11	1	A0A0A0MQU8;P05013	A0A0A0MQU8	IFNA6	Interferon alpha-6	1	AEIMRSFSS(0.018)S(0.981)R;AEIMRSFSS(0.006)S(0.994)R	103.43	0.01087	37359000.0	1083.23	652.23	1420.94	1564.1799999999998	818.0799999999999	1095.33	814.01	1063.34	973.81	1263.95	True	False	1035.612506222979	759.99992148558	1122.7041122940286	1427.0507679461184	925.6718592482473	1306.9870205388454	996.572463658527	1025.9417294931507	928.537785652056	1035.0364070740839	1.000556597956321	0.7342736123012359	1.084700117426565	1.3787445139057564	0.8943374869923695	1.262744973612601	0.9628380768515288	0.9912131809868963	0.8971064006114665	1.0	10.015465799615152	-12.341719050957725	17.445489298947805	0.9999978120927064	1.0273057892415995	0.0009792946469737718	0.17575821008260364	0.0	0.0	0.1735034982402741	0.042080779391695196	4.552824912807372e-13	12.341719050957725	0.027307977148893103	
AEISHHISSCDDR	ddPTM_K562_Methotrexat_30min_R1	4	AEISHHISSCDDR	13	0	G3V1V4;Q8WW33	G3V1V4	GTSF1	Gametocyte-specific factor 1	0	;;;	171.32	1.1985e-08	79810000.0	10284.699999999999	8631.8	11505.8	10243.300000000001	9682.0	9341.2	8626.300000000001	10565.5	11019.3	11430.8	False	True	9832.596902552064	10058.058234486653	9090.88981606024	9345.28579274922	10955.352705409658	11146.254696080143	10560.967363125219	10193.905376417597	10507.015148166174	9360.571353283307	1.0504270018841522	1.0745132807474083	0.9711896285979944	0.9983670269733348	1.1703722232261993	1.1907664901427721	1.1282396089444755	1.0890259784026954	1.1224758352470376	1.0	13.1923808767989	-7.754647733004338	24.998894036541234	1.1255336261379512	1.0235138264373067	0.4040370100573436	0.05483562703750073	153.45866706255492	564851.410504859	0.016627023299210265	0.020980545715299743	1.759350087726504e-08	7.754647733004338	-0.10201979970064445	
AEKPPLSAS(ph)SPQQRPPEPETGESAGTSR	ddPTM_K562_Methotrexat_30min_R1	1	AEKPPLSASSPQQRPPEPETGESAGTSR	28	2	Q9Y3Q8	Q9Y3Q8	TSC22D4	TSC22 domain family protein 4	1	AEKPPLS(0.095)AS(0.523)S(0.378)PQQRPPEPET(0.003)GESAGTSR	58.191	0.010048	11579000.0	512.09	391.82	856.74	521.26	444.71	371.93	455.62	522.77	641.96	595.31	True	False	489.57913675925255	456.5615951987485	676.9219820448337	475.5619451083594	503.197159845355	443.8002086576767	557.8043831059796	504.3838827911433	612.115419719652	487.4935903281556	1.0042781002098777	0.9365489193230514	1.3885761689485285	0.9755245085135079	1.0322128738279994	0.9103713719783131	1.1442291635680673	1.0346472093132917	1.2556378829670507	1.0	8.929239439893228	-12.15784518705143	4.847185153231028	0.9999939907813604	1.0725937885713894	0.024700592524144138	0.14158601294196713	9.026904867558054e-06	1.5682770862321639e-06	0.13459134445846438	0.03264049392583164	6.952721170625683e-13	12.15784518705143	0.07259979779002901	
AEKPPLSASS(ph)PQQRPPEPETGESAGTSR	ddPTM_K562_Methotrexat_30min_R1	1	AEKPPLSASSPQQRPPEPETGESAGTSR	28	2	Q9Y3Q8	Q9Y3Q8	TSC22D4	TSC22 domain family protein 4	1	AEKPPLS(0.27)AS(0.22)S(0.492)PQQRPPEPET(0.013)GES(0.002)AGT(0.001)S(0.001)R	48.20399999999999	0.025068	0.0	283.42	179.1	344.82	295.97	178.88	43.06399999999999	182.41	232.78	322.77	207.37	True	False	270.96119615752593	208.69323082051935	272.4469942441108	270.0227696230695	202.4058553959594	51.38550852481429	223.320085866208	224.59299545903994	307.7644931505263	169.81328354361534	1.5956419339122634	1.2289570430861962	1.6043915326219735	1.59011570819615	1.191931815769718	0.3026000525548774	1.3150919716410159	1.3225879081559295	1.812369955566398	1.0	7.407805507045708	-7.833766433846275	6.696886937966386	1.1357178817751268	1.491379468041637	0.17657785344674737	0.36623239693475856	0.41389089444342897	30.694446180850846	0.12141163716516984	0.1386316743842588	1.4663362332777292e-08	7.833766433846275	0.35566158626651023	
AELAHS(ph)PLPAK	ddPTM_K562_Methotrexat_30min_R1	4	AELAHSPLPAK	11	0	Q9BRK3-4;Q9BRK3-3;Q9BRK3;Q9BRK3-2	Q9BRK3-4	MXRA8	Matrix-remodeling-associated protein 8	1	AELAHS(1)PLPAK;AELAHS(1)PLPAK;AELAHS(1)PLPAK;AELAHS(1)PLPAK	105.0	0.0027645	48600000.0	15840.1	11898.2	20398.4	17733.9	12390.599999999999	11373.8	10780.9	15148.600000000002	15629.599999999999	20061.5	True	False	15143.788170400203	13864.17531517981	16117.054600629523	16179.196520655983	14020.18108155844	13571.625879145757	13198.791259881587	14615.815151691786	14902.983307449478	16428.167950090377	0.9218184411315865	0.8439270500094649	0.9810622005809757	0.984844845134845	0.8534232864037228	0.8261192556818908	0.8034244171340467	0.8896801637343487	0.9071603938263543	1.0	14.003883981158745	-5.897859983475405	18.915062775139322	0.8933301208767204	3.358201307640423	0.004511295472813925	0.06654958990583161	1914.0384729485268	358228.9357772899	0.016997550797390234	2161.122001251771	1.265144164158413e-06	5.897859983475405	2.4648711867637028	
AELGMGDS(ph)TSQSPPIKR	ddPTM_K562_Methotrexat_30min_R1	1	AELGMGDSTSQSPPIKR	17	1	Q9NR19;Q9NR19-2	Q9NR19	ACSS2	Acetyl-coenzyme A synthetase, cytoplasmic	1	AELGMGDS(0.858)T(0.071)S(0.071)QS(0.001)PPIKR	100.04	0.0040354	20901000.0	3621.8	2559.5	4293.7	3530.7	2342.5	2398.4	1837.6	3185.8	2851.6	3379.9	True	False	3462.59000862087	2982.41387093869	3392.5110468822563	3221.169012765384	2650.579809173945	2861.8568559798123	2249.728577313435	3073.75360827137	2719.0297384144787	2767.767358099367	1.2510408428975184	1.0775522235317931	1.2257211708761182	1.163814943961681	0.9576598992026935	1.033994727774034	0.8128315303415997	1.1105534572031823	0.9823909984550304	1.0	11.434506968452647	-7.748427333641549	12.891763151012462	0.9824798648398372	1.1755883703631251	0.5815655433332835	0.08167996995814922	0.5585852964946079	549.3636689000529	0.0235379771015486	0.02968531027152823	1.7847305855260296e-08	7.748427333641549	0.19310850552328795	
AELGMGDSTS(ph)QSPPIKR	ddPTM_K562_Methotrexat_30min_R1	1	AELGMGDSTSQSPPIKR	17	1	Q9NR19;Q9NR19-2	Q9NR19	ACSS2	Acetyl-coenzyme A synthetase, cytoplasmic	1	AELGMGDS(0.005)T(0.026)S(0.658)QS(0.311)PPIKR	90.913	0.014301	15290000.0	5508.0	3921.6	7216.3	5148.3	3146.9	3634.1	3333.1	4775.0	4148.0	5893.7	True	False	5265.874915092977	4569.577744197368	5701.697246574379	4696.956532251405	3560.772508640119	4336.338392393362	4080.6325212469587	4607.060543504234	3955.1603853777733	4826.293818879329	1.0910804672716174	0.9468088590715824	1.1813821247829293	0.9732015307228113	0.7377861030157784	0.8984820558231709	0.8455002273762285	0.9545752323413247	0.8195026108659432	1.0	12.236700032403252	-7.524957761934297	24.998902827258764	0.8716856128645204	1.0632672491541695	0.5148981806952688	0.085836119864693	49.888291120729896	599868.3494219099	0.023854117967447307	0.031009558409714654	2.985672981620094e-08	7.524957761934297	0.19158163628964908	
AELGMGDSTSQS(ph)PPIKR	ddPTM_K562_Methotrexat_30min_R1	1	AELGMGDSTSQSPPIKR	17	1	Q9NR19;Q9NR19-2	Q9NR19	ACSS2	Acetyl-coenzyme A synthetase, cytoplasmic	1	AELGMGDS(0.03)T(0.127)S(0.127)QS(0.716)PPIKR	58.107	0.024203	41759000.0	5186.8	3845.7	7237.2	5342.2	3684.8	3803.6	3506.6	4445.8	4283.5	5916.3	True	False	4958.794482498961	4481.136559276776	5718.2106221897775	4873.857620300576	4169.41578691319	4538.591868497672	4293.044312803275	4289.43869409657	4084.361019953156	4844.80073988085	1.0235290879312642	0.9249372264971587	1.1802777718223365	1.00599753880083	0.8605959276285384	0.9367963951824552	0.886113700706885	0.8853694763516861	0.8430400421491027	1.0	12.242221615421675	-7.645571848648792	5.517394269734853	0.897687308856589	1.0404478380462436	0.45803741094387396	0.07074503972703275	0.1836952679562476	8.152394324343756	0.020791022159777683	0.026929908853655916	2.261664344433775e-08	7.645571848648792	0.14276052918965465	
AELPGSS(ph)SPLLAQPR	ddPTM_K562_Methotrexat_30min_R1	1	AELPGSSSPLLAQPR	15	0	Q9C0H5;Q9C0H5-2	Q9C0H5	ARHGAP39	Rho GTPase-activating protein 39	1	AELPGS(0.06)S(0.47)S(0.47)PLLAQPR	134.4	8.1702e-05	15198000.0	942.58	906.33	1121.1	1011.9	1046.3	899.26	991.97	1126.8	1019.7	1211.6	True	False	901.1453118134248	1056.0856275240715	885.7964307379877	923.1882980761019	1183.9067894722293	1073.0292679738186	1214.4445237470663	1087.1698053236803	972.2943695683979	992.1674993559554	0.908259252997487	1.0644227191574076	0.8927892027434721	0.9304762539343105	1.1932529439240223	1.081500118347308	1.2240317532426706	1.0957522858079847	0.9799699851078999	1.0	9.954439889107766	-7.745884460991534	24.999769734745012	1.1062402753613885	0.9532181181961945	0.4285556682951891	0.08243538787188102	227.06792164658424	364940.83915367577	0.024255969732168463	0.031203770544270884	1.79521115841049e-08	7.745884460991534	-0.15302215716519396	
AENGERS(ph)DLEEDNER	ddPTM_K562_Methotrexat_30min_R1	1	AENGERSDLEEDNER	15	1	Q8WU90	Q8WU90	ZC3H15	Zinc finger CCCH domain-containing protein 15	1	AENGERS(1)DLEEDNER	102.5	0.005428499999999999	4824300.0	1365.5	1082.3	1768.7	1169.4	1436.4	1245.9	1260.6	1490.3	1496.0	1890.6	True	False	1305.4742550035332	1261.1316790454948	1397.474040715617	1066.880517610627	1625.311777117375	1486.6525420552232	1543.3216393999337	1437.885304289918	1426.4512865296892	1548.1940197114302	0.8432239360069755	0.8145824509001518	0.9026478741831686	0.6891129303092672	1.0498114295909236	0.9602495056351672	0.9968528619478813	0.9287500700706279	0.9213646793413963	1.0	10.596370566051089	-7.7738970668094405	24.99999904639402	0.9728468987573972	0.818995113717719	0.6375324238499628	0.060385848453392614	149.2452362121899	299503.26477685285	0.018236596595823024	0.020819693242545442	1.6830729230045943e-08	7.7738970668094405	-0.1538517850396781	
AENGTGS(ph)SPRGPGCSLR	ddPTM_K562_Methotrexat_30min_R1	1	AENGTGSSPRGPGCSLR	17	1	M0R102;M0R050;Q9NQT4	M0R102	EXOSC5	Exosome complex component RRP46	1	AENGT(0.002)GS(0.499)S(0.499)PRGPGCSLR	82.837	0.009193600000000001	30410000.0	1466.1	1347.9	1661.0	1688.6	1274.2	1128.4	1299.0	1438.5	1488.2	1765.9	True	False	1401.651999458573	1570.6175646174097	1312.3787989080345	1540.5630597206298	1441.779634087274	1346.4473300065126	1590.3338168971222	1387.9071396504382	1419.0139068271935	1446.0783980791364	0.9692780151618501	1.0861220018940203	0.9075433259021789	1.0653385471818124	0.9970272953405759	0.9311025818482828	1.0997562919199984	0.9597730949401024	0.9812842157880974	1.0	10.497930053724279														
AENNS(ph)EVGASGYGVPGPTWDR	ddPTM_K562_Methotrexat_30min_R1	4	AENNSEVGASGYGVPGPTWDR	21	0	Q08211	Q08211	DHX9	ATP-dependent RNA helicase A	1	AENNS(1)EVGASGYGVPGPTWDR;AENNS(0.939)EVGAS(0.061)GYGVPGPTWDR;AENNS(0.998)EVGAS(0.002)GYGVPGPTWDR;AENNS(1)EVGASGYGVPGPTWDR	168.68	2.0484e-19	51982200.0	2598.19	1847.19	2089.27	2406.38	1856.75	1801.7399999999998	2024.7900000000002	2174.6600000000003	2629.2200000000003	2995.09	True	False	2483.976678584863	2152.4067506384977	1650.7607785638693	2195.4164015459746	2100.945169982378	2149.9007553756937	2478.9006998576797	2098.175975190978	2506.9881360759296	2452.650177984506	1.012772510683158	0.8775840802569175	0.6730518658475793	0.8951200710368258	0.8566020498320124	0.8765623302799749	1.0107029213170324	0.8554729875563333	1.0221547934471749	1.0	11.260125761330938	-8.623123027521205	6.269749685907167	0.9595820269616819	0.8561879455986735	0.25186846641816807	0.08892607742040681	0.33398061540470914	17.895498518818194	0.03499754826337409	0.026942253958049504	2.381644698295326e-09	8.623123027521205	-0.10339408136300843	
AEPQPLS(ph)PASSSYSVSSPR	ddPTM_K562_Methotrexat_30min_R1	1	AEPQPLSPASSSYSVSSPR	19	0	P18850	P18850	ATF6	Cyclic AMP-dependent transcription factor ATF-6 alpha;Processed cyclic AMP-dependent transcription factor ATF-6 alpha	1	AEPQPLS(0.49)PAS(0.152)S(0.152)S(0.152)YS(0.02)VS(0.014)S(0.02)PR	92.236	0.0094113	0.0	701.58	663.17	491.16	742.18	538.94	449.51	374.83	727.53	504.79	439.42	True	False	670.7393832481719	772.7475705373746	388.07222809853704	677.1142317087867	609.8200565021153	536.3714456852423	458.89516904353206	701.9423575320707	481.3224230797602	359.8367799331411	1.8640100752702309	2.1474946798961287	1.078467376710747	1.8817260198765589	1.694712965738027	1.4905965026279469	1.2752870040933457	1.9507243191273944	1.3376131899835018	1.0	8.491198845833921	-12.874321997132373	0.10025121486088893	7.343205476385108e-14	2.1759026654905487	0.33575671106515526	0.3039943253919955	97.47886508399519	1.43743532162268	31.03248591872512	6.685390220426455	1.3356048974309975e-13	12.874321997132373	2.1759026654904754	
AEQGS(ph)EEEGEGEEEEEEGGESKADDPYAHLSK	ddPTM_K562_Methotrexat_30min_R1	2	AEQGSEEEGEGEEEEEEGGESKADDPYAHLSK	32	1	Q5STZ8;Q8NE71	Q5STZ8	ABCF1	ATP-binding cassette sub-family F member 1	1	AEQGS(0.999)EEEGEGEEEEEEGGES(0.001)KADDPYAHLSK;AEQGS(0.997)EEEGEGEEEEEEGGES(0.003)KADDPYAHLSK	76.575	5.6320000000000005e-06	55032000.0	4127.2	2684.54	8414.7	3824.0299999999997	2859.9	2488.02	1978.39	3379.56	3443.6	5595.599999999999	True	False	3945.7732297697453	3128.1146056220946	6648.569463679373	3488.783227089592	3236.0269781244647	2968.7946526079427	2422.094318715242	3260.698959247158	3283.5077876294367	4582.182617527386	0.861112172761666	0.6826691266421135	1.4509612598694375	0.7613802238576408	0.7062195569740677	0.6478996802205034	0.5285896527673182	0.711603886491691	0.7165816078716798	1.0	12.161819241373443	-7.501399567689446	24.976044347896135	0.6949261366774256	0.9899365277276037	0.2576624237583025	0.21151283590645445	977.7232465945798	1136899.8019486638	0.05910422809489984	0.08669350396862402	3.1521032322216295e-08	7.501399567689446	0.295010391050178	
AEQS(ph)LHDLQER	ddPTM_K562_Methotrexat_30min_R1	4	AEQSLHDLQER	11	0	E9PNJ4;Q13586;G0XQ39;Q13586-2	E9PNJ4	STIM1	Stromal interaction molecule 1	1	AEQS(1)LHDLQER;AEQS(1)LHDLQER;AEQS(1)LHDLQER;AEQS(1)LHDLQER	108.63	0.0021330999999999998	159885000.0	11130.0	9038.8	9812.7	11194.199999999999	8024.799999999999	9005.4	9890.7	9635.0	11215.0	12541.7	True	False	10640.738526685707	10532.308066669513	7753.148368479755	10212.821866116716	9080.201858125527	10745.56609858263	12108.941249256644	9296.13158883001	10693.617097881324	10270.276598442213	1.0360712707873598	1.025513574606846	0.7549113496763803	0.9944057268784551	0.8841243729991464	1.046278159656626	1.1790277635846067	0.9051490969814815	1.0412199705997522	1.0	13.326187416300717	-8.2784110921019	23.7676150638659	1.0374501303490113	0.9366616409096872	0.19093777863087924	0.09795259364348864	745.6081582724727	1044163.6287030086	0.035029991711343154	0.030987850561145242	5.267310351816338e-09	8.2784110921019	-0.10078848943932417	
AERSWS(ph)CSREK	ddPTM_K562_Methotrexat_30min_R1	1	AERSWSCSREK	11	2	H3BNJ6;O60303	H3BNJ6	KIAA0556	Uncharacterized protein KIAA0556	1	AERS(0.138)WS(0.689)CS(0.173)REK	83.137	0.026143	0.0	1196.7	956.55	1155.9	1055.5	1026.7	932.27	974.96	1061.6	967.35	1012.8	True	False	1144.094500888121	1114.603628930027	913.292386308125	962.9659537694693	1161.729045924818	1112.417983290652	1193.6195982463582	1024.2629262793919	922.3781096420419	829.3721057673413	1.379470677796182	1.3439126071147371	1.1011853183356584	1.1610782989603032	1.4007332026798485	1.3412773055122642	1.4391846433537965	1.2349859841641722	1.1121402603583475	1.0	9.695875715740733	-9.840974821255633	2.501336787229411	1.007531109569863	1.303197042784351	0.5112518409701148	0.0998984972106157	0.23982547767166526	2.9478843727196735	0.10417730364895807	0.02897531927852846	1.4421989623186815e-10	9.840974821255633	0.295665933214488	
AES(ph)PDLR	ddPTM_K562_Methotrexat_30min_R1	2	AESPDLR	7	0	Q6UN15-5;Q6UN15;A0A0B4J203;Q6UN15-4	Q6UN15-5	FIP1L1	Pre-mRNA 3-end-processing factor FIP1	1	AES(1)PDLR;AES(1)PDLR	102.51	0.010464	21089000.0	10903.5	9291.6	14032.3	11678.3	9513.2	10024.2	9340.8	11307.9	11464.8	13211.4	True	False	10424.195195482269	10826.878969804227	11087.111992725586	10654.481570730442	10764.352546695229	11961.2347797335	11435.712176191408	10910.19474762126	10931.803950404801	10818.687438916531	0.9635360346935238	1.0007571649457427	1.0248111940865847	0.9848220156915326	0.9949776816708974	1.105608683795323	1.057033234462005	1.008458263465082	1.010455659443619	1.0	13.401237856511592	-8.10311203238022	22.94140469037968	1.0394864380464832	0.9953741179722282	0.30698564342213575	0.03172637090362128	23.979989859910958	5324.205964831596	0.010969591864782049	0.010969596702547652	7.886566462825347e-09	8.10311203238022	-0.04411232007425503	
AES(ph)PEEVACR	ddPTM_K562_Methotrexat_30min_R1	1	AESPEEVACR	10	0	Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7	Q7Z6Z7-2	HUWE1	E3 ubiquitin-protein ligase HUWE1	1	AES(1)PEEVACR	122.69	0.0032894	6473800.0	1824.1	1428.4	2235.0	1577.9	1529.7	1334.2	1354.9	1641.9	1763.6	1970.6	True	False	1743.9147481156695	1664.4188213513664	1765.9040430821526	1439.567956847793	1730.8823624731617	1592.0152673650196	1658.770814868293	1584.1534463622208	1681.6106209383406	1613.7052444955798	1.0806897691286808	1.0314267906290648	1.094316356165867	0.8920885408027416	1.0726137058656022	0.9865588977884618	1.0279267670018635	0.9816869913299462	1.0420804088444213	1.0	10.656161368148286														
AES(ph)PESSAIESTQS(ph)TPQKGR	ddPTM_K562_Methotrexat_30min_R1	1	AESPESSAIESTQSTPQKGR	20	1	Q9NTI5-2;Q9NTI5	Q9NTI5-2	PDS5B	Sister chromatid cohesion protein PDS5 homolog B	2	AES(0.991)PES(0.009)SAIES(0.009)T(0.016)QS(0.533)T(0.442)PQKGR	84.12700000000001	0.0075363	29736000.0	1911.5	1285.2	2832.4	2125.1	1550.3	1557.9	1379.8	1699.5	1871.8	2487.2	True	False	1827.4727487654745	1497.5574553351835	2237.9179470361923	1938.795782430599	1754.1916235485016	1858.9421263888207	1689.2552737141257	1639.7276217142291	1784.780426554995	2036.7439785392298	0.8972520689989488	0.7352703487108108	1.09877233988007	0.9519094215371733	0.8612725222374895	0.9127028953938874	0.8293900910047978	0.8050730180089968	0.876291004348546	1.0	10.992048927653457	-7.778959381303378	24.359897669916684	0.8700677176772986	0.9202610933600059	0.03301396563209358	0.096080226645343	606.1128045948302	842737.2734784113	0.0305915183275156	0.03476934065251461	1.6635682333129825e-08	7.778959381303378	0.05019337568270732	
AES(ph)PESSAIESTQSTPQK	ddPTM_K562_Methotrexat_30min_R1	1	AESPESSAIESTQSTPQK	18	0	Q9NTI5-2;Q9NTI5	Q9NTI5-2	PDS5B	Sister chromatid cohesion protein PDS5 homolog B	1	AES(0.994)PES(0.004)S(0.001)AIESTQSTPQK	122.19	0.00011698	40691000.0	6330.9	4917.4	9591.5	6278.6	4881.3	4175.0	3789.5	5407.7	5309.0	6987.4	True	False	6052.601216405618	5729.916768491463	7578.3752256028965	5728.164886155363	5523.276509080368	4981.759662156319	4639.391839208348	5217.508125886464	5062.185748787513	5721.914150709643	1.0577930840949374	1.0013985910258418	1.324447558281351	1.0010924203476463	0.9652847567444472	0.8706456495049776	0.8108111581214411	0.9118466283244355	0.8847014505031836	1.0	12.48228213687149	-7.709487620007247	2.5929730674855285	0.8900086677036319	1.118397080482485	0.5242333496742242	0.09265553803605045	0.2117698277271339	2.9071504653238116	0.0299155096530599	0.03902184885350587	1.952146381109068e-08	7.709487620007247	0.22838841277885313	
AES(ph)PSPAPPPGLR	ddPTM_K562_Methotrexat_30min_R1	2	AESPSPAPPPGLR	13	0	Q9BUA3	Q9BUA3	C11orf84	Uncharacterized protein C11orf84	1	AES(0.857)PS(0.143)PAPPPGLR;AES(0.925)PS(0.075)PAPPPGLR	137.95	1.7384e-05	124354000.0	3505.3	3161.6	4179.8	3427.2	2963.5	3034.8999999999996	2639.2	3495.5	3588.5	3469.1000000000004	True	False	3351.211209127711	3684.0006619885776	3302.5171003466576	3126.742697071268	3353.2521940179226	3621.3514727372963	3231.1077825672705	3372.56128373174	3421.6714182565443	2840.8123737336937	1.179666506705333	1.2968123822787625	1.162525596861627	1.1006509004189442	1.1803849578459582	1.2747591168711139	1.1373886612302415	1.1871819888263744	1.2044693447175552	1.0	11.47208783409776	-12.42883027261353	2.8937656968979764	0.9957574317391849	1.1915065295230367	0.519867842908297	0.05522165504281337	8699478.958025314	10107158.812329965	303426.5894269299	0.015412463828467015	3.7253726975107003e-13	12.42883027261353	0.19574909778385186	
AES(ph)PTPGMAQGMEPGAGQEGAMFVHAR	ddPTM_K562_Methotrexat_30min_R1	4	AESPTPGMAQGMEPGAGQEGAMFVHAR	27	0	Q86VX9;A0A0A0MSQ9;Q86VX9-5	Q86VX9	MON1A	Vacuolar fusion protein MON1 homolog A	1	AES(0.93)PT(0.07)PGMAQGMEPGAGQEGAMFVHAR;AES(0.905)PT(0.095)PGMAQGMEPGAGQEGAMFVHAR;AES(0.911)PT(0.089)PGMAQGMEPGAGQEGAMFVHAR;AES(0.922)PT(0.078)PGMAQGMEPGAGQEGAMFVHAR	117.04	8.646e-13	103779000.0	4889.8	3814.1299999999997	5491.2	4496.09	3993.7200000000003	3983.68	3634.5	4436.849999999999	4963.1	5183.799999999999	True	False	4674.850246881203	4444.350153375026	4338.672161688017	4101.924770330056	4518.964181641052	4753.469779865598	4449.62914358167	4280.803470669479	4732.366564288434	4244.963587950972	1.1012698106882315	1.04697014739773	1.0220752361699943	0.9663038764273687	1.0645472188425387	1.119790472021476	1.048213736440903	1.008442918761479	1.114819118289005	1.0	12.051536463479774	-6.2654207291916	5.531309936336963	1.0436935194202395	1.1032062020451832	0.12604197869105782	0.045732496421236606	0.321715861560164	38.9798350261057	0.011787789135466922	0.07255884669257442	5.427243045521583e-07	6.2654207291916	0.05951268262494369	
AESGDS(ph)LGSEDRDLLYSIDAYR	ddPTM_K562_Methotrexat_30min_R1	1	AESGDSLGSEDRDLLYSIDAYR	22	1	Q9NQW6-2;Q9NQW6	Q9NQW6-2	ANLN	Actin-binding protein anillin	1	AES(0.032)GDS(0.925)LGS(0.043)EDRDLLYSIDAYR	61.091	0.011575	13837000.0	511.61	494.56	739.86	461.74	403.05	418.27	407.41	500.11	468.29	603.5	True	False	489.12023698451674	576.2776339173421	584.573496785128	421.25997109759817	456.05813963182834	499.0947578179934	498.7820633888043	482.5208478349536	446.5193001129597	494.2003019654334	0.9897206356193768	1.1660811044135087	1.182867542695301	0.8524073526913041	0.9228204390367352	1.009903789684253	1.0092710615617781	0.9763669627800091	0.9035188734955311	1.0	8.948952081954777	-7.252951275647991	24.954515323354727	0.955884486130399	1.1182088967728339	0.5383537085001739	0.06757112264677859	484.6197392201164	1424749.9138168758	0.018974183370608015	0.03219564606096305	5.585328541211408e-08	7.252951275647991	0.16232441064243486	
AESPES(ph)SAIESTQSTPQK	ddPTM_K562_Methotrexat_30min_R1	1	AESPESSAIESTQSTPQK	18	0	Q9NTI5-2;Q9NTI5	Q9NTI5-2	PDS5B	Sister chromatid cohesion protein PDS5 homolog B	1	AES(0.104)PES(0.885)S(0.011)AIESTQSTPQK	252.38	2.7523999999999995e-84	38591000.0	4094.4	2886.1	6175.8	4490.2	2611.8	2483.2	2190.6	3412.3	3712.2	4405.8	True	False	3914.4150784961303	3362.9789696878865	4879.583977300561	4096.551137485238	2955.2974794452534	2963.0432558243274	2681.8978131599965	3292.287474889946	3539.620632256359	3607.866926925114	1.0849665904480237	0.9321238942019575	1.3524844668978122	1.1354496217455048	0.8191259653703393	0.8212728783624089	0.7433472097169904	0.9125301851684071	0.9810840321854888	1.0	11.816930411668421	-7.756183488449861	24.95917312582412	0.8654615445772429	1.128548776416399	0.502558331639881	0.11973851901664291	106.15871499565806	504123.23067293834	0.037155609728041813	0.04652702438397755	1.7531396477575817e-08	7.756183488449861	0.26308723183915617	
AET(ph)PPLPIPPPPPDIQPLER	ddPTM_K562_Methotrexat_30min_R1	2	AETPPLPIPPPPPDIQPLER	20	0	U3KPW8;A0A669KB72;Q8IX15;Q8IX15-3	U3KPW8	HOMEZ	Homeobox and leucine zipper protein Homez	1	AET(1)PPLPIPPPPPDIQPLER;AET(1)PPLPIPPPPPDIQPLER	108.96	0.00044754	32313000.0	3298.3	2665.32	4016.8999999999996	3569.9	3171.0	2864.8999999999996	2785.1	3693.1	3710.1	3632.8999999999996	True	False	3153.3106812729065	3105.7188273062343	3173.8075841864425	3256.932409627311	3588.04208106321	3418.501378709375	3409.729571547482	3563.211579730992	3537.6182607979927	2974.9466064792423	1.0599553868984402	1.0439578379464622	1.0668452258182024	1.0947868450929241	1.2060862111772646	1.149096716984466	1.1461481574564432	1.1977396743761877	1.189136723695574	1.0	11.538648060222544	-7.556926322687987	5.044368435079694	1.157902144533332	1.0588485864249935	0.3506661985613906	0.05512578809001158	0.17886979950784926	11.345482061848006	0.01544027235587693	0.020610440410179384	2.7737906335494868e-08	7.556926322687987	-0.09905355810833849	
AET(ph)PTESVSEPEVATK	ddPTM_K562_Methotrexat_30min_R1	3	AETPTESVSEPEVATK	16	0	P18858-3;P18858;M0R0Q7;P18858-2;B4E135	P18858-3	LIG1	DNA ligase 1;DNA ligase	1	AET(0.656)PT(0.024)ES(0.318)VS(0.002)EPEVATK;AET(0.981)PT(0.015)ES(0.004)VSEPEVATK;AET(0.663)PT(0.018)ES(0.159)VS(0.159)EPEVATK	188.0	4.0487000000000004e-08	29850800.0	10435.4	7792.4	14980.1	10066.0	7931.9	7440.700000000001	5768.099999999999	9008.599999999999	10360.599999999999	12222.7	True	False	9976.672310995145	9079.961651847092	11835.981725178954	9183.529408473216	8975.083879780917	8878.509968432698	7061.743255769276	8691.762431876916	9878.937967392712	10009.050589615414	0.9967650999132863	0.907175118214282	1.1825279150311236	0.9175225288601606	0.8966968244813093	0.8870481659513567	0.7055357741018887	0.8683902987656781	0.9870005030889047	1.0	13.289017513102618	-7.50513631895044	23.654844165335593	0.8776912510233711	1.0222191827979237	0.2783716504115453	0.09831716994112796	461.67925599799474	615527.138292196	0.028327437600217022	0.04097492189863817	3.1250982886097743e-08	7.50513631895044	0.1445279317745526	
AETASQSQRS(ph)PISDNSGCDAPGNSNPSLSVPSSAESEKQTR	ddPTM_K562_Methotrexat_30min_R1	2	AETASQSQRSPISDNSGCDAPGNSNPSLSVPSSAESEKQTR	41	2	A0A0A0MTP7;F8VXG7;Q99590-2;Q99590	A0A0A0MTP7	SCAF11	Protein SCAF11	1	AET(0.019)AS(0.101)QS(0.101)QRS(0.612)PIS(0.124)DNS(0.04)GCDAPGNS(0.003)NPS(0.001)LSVPSSAESEKQTR;AET(0.102)AS(0.251)QS(0.072)QRS(0.521)PIS(0.036)DNS(0.015)GCDAPGNS(0.002)NPS(0.001)LSVPSSAESEKQTR	53.114	0.00047352	85867000.0	1084.7	799.38	1619.8600000000001	1504.0	741.84	803.4100000000001	1015.24	861.17	782.72	1563.04	True	False	1037.0178867831069	931.4639578632421	1279.8735226966699	1372.146655110641	839.4049629189324	958.6576120174872	1242.9334136001803	830.8821629841972	746.3315180431268	1279.9583098327266	0.8101966125120366	0.7277299195666552	0.9999337578924209	1.07202449061795	0.6558064871883454	0.7489756538576408	0.9710733576647625	0.6491478328640112	0.5830904899868671	1.0	10.321881104905257	-7.781400440251845	24.9999821355095	0.7596739490808221	0.896951409936601	0.15467976923232363	0.15302461690955246	480.6214008794117	601945.1756205871	0.0493753214569143	0.05605852510001492	1.654243968121092e-08	7.781400440251845	0.13727746085577897	
AFAAVPTSHPPEDAPAQPPTPGPAAS(ph)PEQLSFR	ddPTM_K562_Methotrexat_30min_R1	4	AFAAVPTSHPPEDAPAQPPTPGPAASPEQLSFR	33	0	A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160-2;Q14160;Q14160-3;H0YCG0	A0A0G2JMS7	SCRIB	Protein scribble homolog	1	AFAAVPTSHPPEDAPAQPPT(0.01)PGPAAS(0.947)PEQLS(0.043)FR;AFAAVPTSHPPEDAPAQPPT(0.338)PGPAAS(0.626)PEQLS(0.037)FR;AFAAVPTSHPPEDAPAQPPT(0.018)PGPAAS(0.91)PEQLS(0.072)FR;AFAAVPTSHPPEDAPAQPPTPGPAAS(0.97)PEQLS(0.03)FR	162.51	2.9193999999999996e-46	594572000.0	5364.4	4322.52	5652.5	5288.48	4805.1	4592.099999999999	4516.96	5476.0	5803.9	6230.8	True	False	5128.587399151192	5036.742959722565	4466.1174959829395	4824.847169294896	5437.054873452175	5479.45833403306	5530.0032621798555	5283.405976173655	5534.077955808592	5102.341742313537	1.0051438453484995	0.9871433969138201	0.8753074022748393	0.9456142714398394	1.065599904522834	1.0739104926257896	1.083816714258815	1.035486496790005	1.0846153071078486	1.0	12.316943815007738	-7.76147355676619	24.99999999902921	1.0611750336161576	0.9501483804462055	0.6222133660672348	0.03957399892254329	0.5908042848194435	432040.00106095936	0.012318414736947775	0.014891961987121527	1.7319144799953106e-08	7.76147355676619	-0.11102665316995208	
AFAAVPTSHPPEDAPAQPPTPGPAAS(ph)PEQLSFRER	ddPTM_K562_Methotrexat_30min_R1	1	AFAAVPTSHPPEDAPAQPPTPGPAASPEQLSFRER	35	1	A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160-2;Q14160;Q14160-3;H0YCG0	A0A0G2JMS7	SCRIB	Protein scribble homolog	1	AFAAVPTSHPPEDAPAQPPT(0.004)PGPAAS(0.949)PEQLS(0.047)FRER	72.578	4.9602e-08	25128000.0	1365.3	1018.2	1171.6	2316.2	1295.4	1320.0	1500.2	1396.0	1506.8	2138.9	True	False	1305.2830467640604	1186.4402435592	925.6971708613202	2113.1423421324907	1465.7678056793707	1575.0713183344528	1836.6580385751076	1346.9018887396683	1436.7491968869886	1751.5244836352358	0.7452268346571925	0.6773757687342055	0.5285094096658379	1.20645892299874	0.8368525929122121	0.8992573800997861	1.048605403884038	0.7689883306365289	0.8202849633623501	1.0	10.774395439614658	-7.239736872712904	24.998910074462653	0.9289602987681331	0.653071181989428	0.5111021693854446	0.1295120163293552	696.0173140500156	801735.0142428847	0.03506395396112029	0.06066579925608951	5.757886864785432e-08	7.239736872712904	-0.2758891167787051	
AFACHS(ph)YLANHTRIHS(ph)GEKT(ph)Y(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	AFACHSYLANHTRIHSGEKTYK	22	2	Q8N4W9-2;Q8N4W9	Q8N4W9-2	ZNF808	Zinc finger protein 808	4	AFACHS(0.515)Y(0.472)LANHT(0.074)RIHS(0.956)GEKT(0.987)Y(0.996)K	42.711000000000006	0.031322	0.0	601.86	524.48	544.73	605.89	457.34	707.97	444.31	506.07	855.37	653.0	True	False	575.4029550468156	611.1414053642994	430.398617175902	552.7725644049111	517.4882262230997	844.7751827585165	543.9578277025103	488.2712312567931	815.6040354003336	534.7353723006264	1.0760517909470293	1.142885690794956	0.8048815161117364	1.033731062201257	0.967746390138129	1.579800451808501	1.0172467651844417	0.9131081588189545	1.5252479593622317	1.0	9.062681302746187														
AFEQLMT(ph)DLTLS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	AFEQLMTDLTLSR	13	0	Q6UUV7;Q6UUV7-3;H0YK33	Q6UUV7	CRTC3	CREB-regulated transcription coactivator 3	2	AFEQLMT(0.956)DLT(0.045)LS(1)R	60.937	0.034007	0.0	203.02	167.56	194.24	241.51	157.05	0.0	115.99	122.47	207.1	161.31	True	False	194.09548388928408	195.24644196698054	153.4716784466565	220.33719326846463	177.70482776126696	0.0	142.00371010153756	118.16266068334322	197.4719662034081	132.09519587414087	1.4693606577048914	1.4780737533635184	1.1618263437292826	1.6680182183037144	1.3452785060448567	0.0	1.0750104056534913	0.8945265564080586	1.4949216350877563	1.0	7.0454341884216545	-8.028563970459873	24.999228338764297	0.8726772709120504	1.4365648057793239	0.34731374378319224	0.3658184384753154	800.8070732561106	700865.5048350103	0.12043100679338407	0.120669655957569	9.36345288484046e-09	8.028563970459873	0.5638875348672735	
AFFSEVER	ddPTM_K562_Methotrexat_30min_R1	1	AFFSEVER	8	0	Q9UQ80;F8VR77;Q9UQ80-2	Q9UQ80	PA2G4	Proliferation-associated protein 2G4	0		143.89	8.737e-07	55270000.0	2620.0	2066.6	2960.8	2510.4	2125.7	2331.4	2437.7	2411.1	2737.0	3001.2	False	True	2504.827937099419	2408.0705238061714	2339.368541726013	2290.317129647441	2405.2668091189125	2781.910054215864	2984.4162782525905	2326.3002463755106	2609.7574674009084	2457.6535977773938	1.0191948691893309	0.9798250355477015	0.9518707371297757	0.9319121017374925	0.9786842260008254	1.1319374124700547	1.2143356089530195	0.9465533501056967	1.0618898732356226	1.0	11.263065869214518	-8.166071231208084	7.136816139817942	1.0763564121242724	0.968536678701188	0.32860737764579373	0.07026773002574135	0.31894545791004225	20.74291677522951	0.024349903922165305	0.02436706793264307	6.822267889118078e-09	8.166071231208084	-0.10781973342308437	
AFFSEVERR	ddPTM_K562_Methotrexat_30min_R1	2	AFFSEVERR	9	1	Q9UQ80;F8VR77;Q9UQ80-2	Q9UQ80	PA2G4	Proliferation-associated protein 2G4	0	;	125.31	0.003493	68056000.0	3607.8	3525.3	4169.0	4449.8	3518.3	3396.2	2960.3999999999996	3598.5	3497.3	3506.6	False	True	3449.2054318577425	4107.795905145601	3293.983872755926	4059.6929427601954	3981.018118512992	4052.467584338992	3624.345058923974	3471.9387153507837	3334.7112863504535	2871.5207603512654	1.2011772575294948	1.430529760350089	1.1471217336255586	1.4137780227169885	1.386379709832223	1.4112618095239766	1.2621691993202298	1.2090940672586574	1.161304954641013	1.0	11.487599276735168	-9.824204452550601	1.1370078034681206	1.0075307833322507	1.3317713585192492	0.5648072644258354	0.09037204735844961	0.32707673591289205	0.9085476006388329	0.0836411803736049	0.02737802513350667	1.498978995936183e-10	9.824204452550601	0.32424057518699856	
AFGPGLQGGSAGS(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	3	AFGPGLQGGSAGSPAR	16	0	A0A087WWY3;Q60FE5;P21333-2;P21333	A0A087WWY3	FLNA	Filamin-A	1	AFGPGLQGGSAGS(1)PAR;AFGPGLQGGS(0.013)AGS(0.987)PAR;AFGPGLQGGSAGS(1)PAR	226.67	9.550999999999999e-40	265711000.0	2624.28	2055.52	2825.5	2367.52	2240.98	1930.63	1777.51	2554.85	2437.58	2143.0600000000004	True	False	2508.9197934241483	2395.1597421339684	2232.4661627421137	2159.9631974119325	2535.7081497385793	2303.6969237242765	2176.1618651830668	2464.9944773972334	2324.257437846951	1754.9310673240122	1.4296400811057768	1.3648169929467384	1.2721104573903668	1.2307966037124918	1.4449047013596532	1.3126993798320774	1.2400269763879466	1.4046104278933038	1.3244152326684089	1.0	10.777198648079146	-10.073384111093592	20.74215066653875	0.9999999992699679	1.3341624082877732	0.6653431517797201	0.07151191775272245	4121.394798994248	1164918.5395588377	0.07000641133567839	0.018075577668082026	8.445315700839332e-11	10.073384111093592	0.33416240901780536	
AFGS(ph)GYRR	ddPTM_K562_Methotrexat_30min_R1	1	AFGSGYRR	8	1	E7EX17;P23588-2;P23588;F8VX11;F8VP89	E7EX17	EIF4B	Eukaryotic translation initiation factor 4B	1	AFGS(1)GYRR	74.165	0.032833	0.0	1031.0	1012.9	1735.7	1557.6	1194.8	1265.9	861.22	1036.7	1339.6	1257.0	True	False	985.6784744845435	1180.2645086437972	1371.4002897439345	1421.0476263300086	1351.9371423697019	1510.5172589996848	1054.3705079200458	1000.2386733928461	1277.3222883924936	1029.3451194209604	0.9575782270566544	1.1466168988178949	1.3323036791736003	1.3805356430206746	1.3133953975807549	1.4674546277048452	1.024311951382412	0.9717233360522586	1.2409077036388227	1.0	10.007511055620263	-8.796357004181315	24.99984012599168	1.0568791633708554	1.271204932587824	0.3230837344347429	0.14672359536154161	233.59036514696075	167240.667338841	0.06518103320458007	0.04394711914961966	1.5982436802124296e-09	8.796357004181315	0.21432576921696866	
AFGSGIDIKPGT(ph)PPIAGR	ddPTM_K562_Methotrexat_30min_R1	1	AFGSGIDIKPGTPPIAGR	18	1	E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;H7C5N8;Q9Y520-3;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424	E7EPN9	PRRC2C	Protein PRRC2C	1	AFGSGIDIKPGT(1)PPIAGR	122.08	0.0020447	10531000.0	592.55	412.51	838.74	643.67	551.89	474.53	451.16	589.94	627.9	765.75	True	False	566.5022114993366	480.67026602888035	662.6999360602796	587.2404504621453	624.4732084887974	566.2262065827636	552.3441145737537	569.1914758188252	598.7090660507964	627.0652547307878	0.9034182762088258	0.766539466829879	1.0568277082180075	0.9364901755149229	0.9958663851609777	0.9029781227886023	0.8808399291886879	0.907706927667665	0.954779524991916	1.0	9.292471772798713	-15.640711084111658	0.009654383970954136	2.0180428339987584	5.438395646471119e-14	0.09965991046217038	0.07166685118254501	37499.01844924102	29.019966775241535	3479.4255756775788	2639.8989857950573	2.2871198116625833e-16	15.640711084111658	-2.018042833998704	
AFHITNDEPIPFWT(ph)FLS(ph)R	ddPTM_K562_Methotrexat_30min_R1	4	AFHITNDEPIPFWTFLSR	18	0	Q15738	Q15738	NSDHL	Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating	2	AFHITNDEPIPFWT(1)FLS(1)R;AFHITNDEPIPFWT(1)FLS(1)R;AFHITNDEPIPFWT(1)FLS(1)R;AFHITNDEPIPFWT(1)FLS(1)R	84.15899999999999	0.0044658	138378000.0	10527.7	9670.3	8417.1	13621.400000000001	8827.6	9879.0	10872.5	8915.3	10723.2	10746.800000000001	True	False	10064.914913512046	11268.152708004842	6650.465736477313	12427.23301058782	9988.58412954702	11787.976934716711	13310.934891619685	8601.743845759851	10224.68077253687	8800.450381378816	1.1436817977871627	1.280406367820393	0.7556960664819233	1.4121132978470106	1.1350082889714619	1.3394742795958838	1.5125288269092185	0.9774208674547594	1.1618360799092322	1.0	13.103361643225085	-5.979149360784667	14.970535349512259	1.1846995032239878	1.0598313843399263	4.983407647396465e-05	0.21363950626286357	7527437.786286564	137646784.81672275	0.05259259077221246	21229034.930204116	1.049181536368185e-06	5.979149360784667	-0.12486811888406146	
AFKPEETSSNSDPPS(ph)PPVLNNSHPVPR	ddPTM_K562_Methotrexat_30min_R1	3	AFKPEETSSNSDPPSPPVLNNSHPVPR	27	1	O60293-2;O60293	O60293-2	ZFC3H1	Zinc finger C3H1 domain-containing protein	1	AFKPEETSSNS(0.001)DPPS(0.999)PPVLNNSHPVPR;AFKPEETSSNSDPPS(1)PPVLNNSHPVPR;AFKPEETSSNSDPPS(0.999)PPVLNNSHPVPR	166.43	9.2309e-35	71321000.0	6906.700000000001	4931.740000000001	10086.5	7670.5	5494.66	4763.98	4153.33	6585.38	6566.9	8869.1	True	False	6603.089737849072	5746.6262097531435	7969.4814901781365	6998.039174219524	6217.304100010968	5684.551711453762	5084.819978239664	6353.768452771081	6261.606252347467	7262.820046663831	0.9091633408819202	0.7912389640430166	1.0972984927306453	0.9635429666791849	0.8560454561815669	0.7826920775856143	0.7001164761854964	0.8748349004860279	0.8621453116167637	1.0	12.82631411902245	-7.883900830587373	4.947630290755237	0.8264900633275356	0.9403231351265168	0.1653153643988472	0.10005427365246927	0.34189285994413227	13.392538454375188	0.03226970509918647	0.03693394137288776	1.3064691810997958e-08	7.883900830587373	0.11383307179898117	
AFLAELEQNS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	AFLAELEQNSPK	12	0	Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;H3BQK9;H3BPE1;A0A590UJG2;H0Y390;Q9UPN3-5	Q9UPN3	MACF1	Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5	1	AFLAELEQNS(1)PK	138.77	5.0743e-06	4833600.0	2452.0	1875.3	3343.0	2249.1	2255.3	1620.9	1616.3	2276.8	2580.1	2913.1	True	False	2344.2130159419003	2185.1614503501946	2641.349984798047	2051.9248949530192	2551.911480738524	1934.1159847638735	1978.7964189767674	2196.723653497476	2460.1517141545787	2385.5093614838506	0.9826886675823971	0.9160146196160663	1.1072477968206575	0.8601621641411908	1.0697553830395228	0.8107769418103652	0.8295068763619955	0.9208614683997949	1.0312899013837022	1.0	11.220081632581381	-8.2566365193518	24.999577813708516	0.907979620672544	0.9828350211170632	0.11969447500537056	0.09054985561436367	854.3749263568114	4447151.974121993	0.030047293150469036	0.029128172536785103	5.538134267491093e-09	8.2566365193518	0.07485540044451922	
AFLASLS(ph)PAMVVPEDQLTR	ddPTM_K562_Methotrexat_30min_R1	1	AFLASLSPAMVVPEDQLTR	19	0	Q9H211;H3BSY1	Q9H211	CDT1	DNA replication factor Cdt1	1	AFLAS(0.007)LS(0.992)PAMVVPEDQLTR	91.09299999999999	0.0020510000000000003	6426300.0	1467.0	900.89	1122.7	1442.1	1134.0	1173.9	1072.5	1314.9	1354.6	1321.8	True	False	1402.5124365362014	1049.7467599882616	887.0606126032807	1315.6733320046912	1283.1408766716115	1400.7395610551625	1313.0354261910431	1268.654221707585	1291.6249416665219	1082.409211496122	1.2957321700890074	0.9698243038206282	0.8195242641894857	1.215504559672167	1.185448962410469	1.2940942724600797	1.213067490783958	1.1720652487371503	1.1932870932253234	1.0	10.080030306734432														
AFLS(ph)PPTLLEGPLR	ddPTM_K562_Methotrexat_30min_R1	2	AFLSPPTLLEGPLR	14	0	G3V599;Q96PC5-6;Q96PC5-11;Q96PC5-13;Q96PC5-10;Q96PC5-9;Q96PC5-14;Q96PC5-7;Q96PC5-12;Q96PC5	G3V599	MIA2	Melanoma inhibitory activity protein 2	1	AFLS(0.998)PPT(0.002)LLEGPLR;AFLS(0.975)PPT(0.025)LLEGPLR	171.36	2.7851999999999996e-52	0.0	4222.1	3440.1	3070.5	3897.9	3046.3	2776.8	3241.1000000000004	3781.3999999999996	4198.6	4906.6	True	False	4036.5015393997974	4008.5180532979803	2426.0440108652124	3556.1771588801644	3446.941845330451	3313.377300569021	3967.9991793266095	3648.4060186820766	4003.4080024221603	4017.9671940738913	1.0046128662656186	0.9976482782662219	0.6037988598919847	0.8850687392682494	0.857882028109725	0.8246402074800233	0.987563856962053	0.9080228489827191	0.9963764782168445	1.0	11.972250069455013	-8.764884284255539	24.95986111206963	0.9653260470475037	0.8575159443016667	0.20387572391114595	0.10650429143073185	159.93023032277452	1158744.3047501575	0.04514400745216957	0.03182934858254564	1.7183661768412746e-09	8.764884284255539	-0.10781010274583702	
AFLSPPTLLEGPLRLS(ph)PLLPGGGGR	ddPTM_K562_Methotrexat_30min_R1	2	AFLSPPTLLEGPLRLSPLLPGGGGR	25	1	G3V599;Q96PC5-6;Q96PC5-11;Q96PC5-13;Q96PC5-10;Q96PC5-9;Q96PC5-14;Q96PC5-7;Q96PC5-12;Q96PC5	G3V599	MIA2	Melanoma inhibitory activity protein 2	1	AFLS(0.001)PPT(0.034)LLEGPLRLS(0.965)PLLPGGGGR;AFLS(0.009)PPT(0.087)LLEGPLRLS(0.904)PLLPGGGGR	54.167	0.011945	34931000.0	1821.67	1226.2	1530.0	1569.2	1114.21	987.13	1352.51	2887.7	3042.9	3464.9	True	False	1741.5915680060696	1428.8087081637116	1208.873908687112	1431.6306723401708	1260.7481447938958	1177.8789018693085	1655.8447965292748	2786.1379542360573	2901.4362431692457	2837.373034432527	0.6138042290778262	0.503567451591529	0.4260539217145573	0.5045620209140023	0.444336408887471	0.41513008250072536	0.5835837503334992	0.9819427760908721	1.0225783525674237	1.0	11.470340121402993	-9.215706015181736	3.3317955322857196	1.0140422679741279	0.4825736572645559	0.949867844876189	0.05333514868646385	0.05033213585123054	1.1318981988204684	0.030982971672467143	0.015483519884930505	6.085468024645548e-10	9.215706015181736	-0.531468610709572	
AFNQS(ph)SHLTQHKTIHTGGKT(ph)Y(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	AFNQSSHLTQHKTIHTGGKTYK	22	2	A0A0A0MS76	A0A0A0MS76	ZNF99		3	AFNQS(0.317)S(0.317)HLT(0.317)QHKT(0.048)IHT(0.213)GGKT(0.897)Y(0.89)K	45.369	0.030522000000000004	0.0	540.51	572.14	487.65	434.87	523.55	706.67	477.39	662.35	749.27	574.81	True	False	516.7498275883997	666.6764102828132	385.29892913154885	396.7456222792317	592.4060017472863	843.2239761571273	584.4568597756102	639.0547750764459	714.4366012420454	470.70633897721734	1.0978178639175091	1.4163319145678237	0.818554791441204	0.8428729112535589	1.2585468957875225	1.79140136074934	1.2416592074063793	1.3576506670061583	1.5177968556667873	1.0	8.878683471630055	-7.994614918251732	24.414517870223246	1.409710132810779	1.0539398436350287	0.29776327741374964	0.24277423546590324	133.41096487536888	604840.6422972421	0.07583328492341028	0.08569407229002106	1.0124768028372904e-08	7.994614918251732	-0.3557702891757504	
AFNS(ph)PSHLIR	ddPTM_K562_Methotrexat_30min_R1	2	AFNSPSHLIR	10	0	A2RRD8	A2RRD8	ZNF320	Zinc finger protein 320	1	AFNS(0.854)PS(0.146)HLIR;AFNS(0.68)PS(0.32)HLIR	110.08	0.0029844000000000003	40821000.0	3516.3	3668.5	4384.700000000001	3590.3	3177.5	3597.3999999999996	2862.3	3413.9	3655.2	3723.2	True	False	3361.727662298738	4274.657271161779	3464.4113904708333	3275.543973300354	3595.396944994749	4292.5466368002735	3504.2436367241203	3293.831201983061	3485.2705498150535	3048.8924014543495	1.102606199121741	1.402036119452011	1.1362852256833589	1.0743389867539732	1.1792469105435508	1.407903615999269	1.149349722887093	1.0803369775895908	1.1431267788107404	1.0	11.57406952171774	-9.694267454169472	1.1893480250128479	1.0208814537225428	1.2128202842387312	0.23884818457156776	0.11151571679352815	0.6675385246942037	1.8633250627313243	0.10735992814778952	0.03545177427233646	2.0217737142126365e-10	9.694267454169472	0.19193883051618843	
AFNWS(ph)S(ph)NLMEHKK	ddPTM_K562_Methotrexat_30min_R1	1	AFNWSSNLMEHKK	13	1	A0A075B7G2;O43345-2;O43345	A0A075B7G2	ZNF208	Zinc finger protein 208	2	AFNWS(1)S(1)NLMEHKK	52.343999999999994	0.033953	5663700.0	1070.5	1084.2	1441.8	1277.9	1181.5	1195.3	1076.3	1301.0	1142.2	1304.0	True	False	1023.4421017805075	1263.3456217510166	1139.1858833627948	1165.8684910677441	1336.8879592482456	1426.2748081857364	1317.6876729225357	1255.2430925861806	1089.0993713062905	1067.8329639816482	0.9584290205505367	1.1830929221742292	1.0668203003539913	1.0918079235169413	1.2519635601652221	1.3356722037008106	1.2339829517991745	1.1755050976378674	1.019915481205362	1.0	10.060470275430832	-6.2579896130904435	24.114765376785517	1.163501045057669	0.9584288966235323	0.23365662011902122	0.10237218460008174	303.3204212912716	2120125.8972584303	0.026830692233522472	0.188541197934729	5.520906433329461e-07	6.2579896130904435	-0.2050721484341368	
AFQLEEGEET(ph)EPDCK	ddPTM_K562_Methotrexat_30min_R1	1	AFQLEEGEETEPDCK	15	0	P38432	P38432	COIL	Coilin	1	AFQLEEGEET(1)EPDCK	123.4	0.0013491	13372000.0	1530.8	1223.3	1431.1	1353.6	1087.1	1047.2	1139.7	1122.7	1287.7	1568.9	True	False	1463.5078649281647	1425.429532455284	1130.731667138644	1234.9319895995773	1230.0727046117374	1249.5565792119996	1395.3067368111238	1083.2140046475818	1227.8351080643579	1284.7570070481659	1.1391320357852677	1.1094934875897855	0.8801132517164413	0.9612183337586415	0.9574360737972778	0.9726014898980453	1.086047189590314	0.8431275320586532	0.9556944241817441	1.0	10.32727980526678	-6.6687915016235815	6.869583112938	0.9569972490042369	1.1299666079725819	0.5426761959470878	0.06155677316577755	0.1560066877124596	9.670439143511208	0.01570811510051068	0.042144970436157246	2.1439196182856424e-07	6.6687915016235815	0.17296935896834498	
AFTGREFDELNPS(ph)AQR	ddPTM_K562_Methotrexat_30min_R1	2	AFTGREFDELNPSAQR	16	1	H7C5W9;P16615-5;P16615-2;P16615-3;P16615-4;P16615	H7C5W9	ATP2A2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	AFTGREFDELNPS(1)AQR;AFTGREFDELNPS(1)AQR	154.46	4.557799999999999e-30	21176000.0	1993.08	1600.65	2071.27	2165.7	1254.98	1582.4299999999998	1698.85	1638.81	1924.19	2404.77	True	False	1905.4665896466079	1865.1302061019774	1636.538732579315	1975.8364434661676	1420.0318672004769	1888.2122017212037	2079.8603578411667	1581.1721234136496	1834.7348268900803	1969.2428503022622	0.9676138163224179	0.9471306222163993	0.8310497267150773	1.0033482884870666	0.7211055086387714	0.9588518762078425	1.0561726084326906	0.8029340429855835	0.9316955634031953	1.0	10.94342532242387														
AFVDFLSDEIKEER	ddPTM_K562_Methotrexat_30min_R1	1	AFVDFLSDEIKEER	14	1	Q07021	Q07021	C1QBP	Complement component 1 Q subcomponent-binding protein, mitochondrial	0		102.9	0.009084899999999998	3010100.0	895.8	863.73	1221.1	1088.5	802.68	687.78	824.55	839.24	1017.1	1275.4	False	True	856.4217046006343	1006.4467016002627	964.807797318844	993.0728950052745	908.2464893181393	820.6837510030833	1009.4763269611407	809.7234535142401	969.8152430009003	1044.4127011213152	0.8200031497904537	0.9636484701112012	0.9237802223996273	0.9508433724897059	0.8696241326278554	0.7857849201967486	0.966549263406443	0.7752906993996672	0.9285747310040134	1.0	10.028476192172048														
AFVEDS(ph)EDEDGAGEGGSSLLQKR	ddPTM_K562_Methotrexat_30min_R1	2	AFVEDSEDEDGAGEGGSSLLQKR	23	1	H0YFD2;F8WFC1;A0A494C108;Q8N9T8	H0YFD2	KRI1	Protein KRI1 homolog	1	AFVEDS(1)EDEDGAGEGGSSLLQKR;AFVEDS(1)EDEDGAGEGGSSLLQKR	118.08	1.0039e-06	235570000.0	3146.3999999999996	2472.0	3821.9	4159.0	2058.04	2152.0699999999997	2062.1499999999996	2583.0	2675.4	3718.5	True	False	3008.088023392982	2880.455983184387	3019.7354193537726	3794.386927264064	2328.708333179228	2567.9270697333536	2524.639630880985	2492.154425941662	2551.0212379555674	3045.0436169982836	0.9878636898995452	0.9459490061504793	0.9916887240947113	1.2460862320929451	0.7647536870013053	0.8433137231264826	0.8290980190850934	0.8184297958918421	0.8377618053531498	1.0	11.572247178007634	-7.793145506316035	24.999868684199946	0.8385456082158538	1.0323147380391042	0.5011956476083634	0.09424112034368134	162.2213561041498	127908.50860648829	0.029023236700889004	0.0329121925673452	1.6101060937679057e-08	7.793145506316035	0.19376912982325045	
AFVHWYVGEGMEEGEFSEAR	ddPTM_K562_Methotrexat_30min_R1	3	AFVHWYVGEGMEEGEFSEAR	20	0	P68363;Q71U36;Q9BQE3;Q71U36-2;F5H5D3;P68366;P0DPH8;P0DPH7;P68363-2;P68366-2;Q9NY65-2;Q9NY65;C9J2C0	P68363	TUBA1B;TUBA1A;TUBA1C;TUBA4A;TUBA8	Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-8 chain	0	;;	114.58	0.00017015	22971300.0	9801.3	5270.0199999999995	5028.96	7197.200000000001	6030.360000000001	5385.2	6198.1	12743.099999999999	12194.0	15058.0	False	True	9370.446587745244	6140.801229976284	3973.4500208046616	6566.232650373873	6823.458039722594	6425.813684465674	7588.18170170135	12294.917950142166	11627.10360156619	12330.850284996672	0.7599189326908427	0.498003064512752	0.3222364986167484	0.532504450107809	0.5533647625277639	0.5211168358993183	0.6153818695645122	0.9970859807698561	0.9429279678882525	1.0	13.589984665069025	-9.181403462818881	3.4042167003904784	0.9832581480240133	0.5233655760103288	0.799000776480665	0.10089501809342445	0.10964091403262674	2.4413438499307962	0.056849919751520914	0.029510958537805634	6.585618021336313e-10	9.181403462818881	-0.4598925720136845	
AFWMAIGGDRDEIEGLS(ph)S(ph)DEEH	ddPTM_K562_Methotrexat_30min_R1	1	AFWMAIGGDRDEIEGLSSDEEH	22	1	Q6PD74-2;Q6PD74	Q6PD74-2	AAGAB	Alpha- and gamma-adaptin-binding protein p34	2	AFWMAIGGDRDEIEGLS(1)S(1)DEEH	68.82	0.006853100000000001	37121000.0	2120.9	1659.7	2227.5	2029.8	1829.3	1730.1	1893.9	2450.1	2442.2	2417.4	True	False	2027.6677754939542	1933.9372149235942	1759.9781905885884	1851.850585467804	2069.885013840723	2064.4173392806338	2318.6552854668666	2363.9285942700994	2328.6626550553506	1979.5854349150582	1.0242890959545574	0.9769405153289468	0.8890640229751474	0.935473939545966	1.0456153987259151	1.042853368624232	1.1712832619251705	1.1941533578577441	1.1763385474470673	1.0	10.950982617182147	-8.324692238601376	1.647748316414741	1.1496067044610911	0.9566828620151475	0.582840930191694	0.06421325310771872	0.2426290067471264	1.3073774432024494	0.028398996730211568	0.02464407314664827	4.73486674922851e-09	8.324692238601376	-0.19292384244594363	
AFWMAIGGDRDEIEGLS(ph)SDEEH	ddPTM_K562_Methotrexat_30min_R1	1	AFWMAIGGDRDEIEGLSSDEEH	22	1	Q6PD74-2;Q6PD74	Q6PD74-2	AAGAB	Alpha- and gamma-adaptin-binding protein p34	1	AFWMAIGGDRDEIEGLS(0.538)S(0.462)DEEH	68.42	0.007432899999999999	10946000.0	994.27	1207.4	1412.7	1105.6	1167.5	1290.3	1240.2	1558.0	1342.5	1831.9	True	False	950.5630813052827	1406.9023277090735	1116.1935756877667	1008.6737645547375	1321.0467138572378	1539.6322136719277	1518.3464201045515	1503.2042569171933	1280.087468025472	1500.1251585260607	0.633655849248774	0.9378566313036288	0.7440669662419876	0.6723930725525623	0.8806243308093203	1.0263358393273563	1.012146494227451	1.0020525609970825	0.8533204451308679	1.0	10.550867157418033	-7.988049049604504	5.281800511551831	0.9790192216360561	0.7608130760705378	0.6095167392152555	0.0871164898368047	0.12524879770077627	10.711675097983536	0.027842926312543866	0.030528834048404133	1.027900199608991e-08	7.988049049604504	-0.21820614556551832	
AGAAAGDSDEES(ph)RADDKGVMDYYLK	ddPTM_K562_Methotrexat_30min_R1	1	AGAAAGDSDEESRADDKGVMDYYLK	25	2	O95365	O95365	ZBTB7A	Zinc finger and BTB domain-containing protein 7A	1	AGAAAGDS(0.333)DEES(0.518)RADDKGVMDY(0.119)Y(0.031)LK	44.258	0.031754000000000004	0.0	1139.3	683.92	2411.7	1539.4	1050.2	721.01	665.67	1246.7	1072.0	1873.1	True	False	1089.2177361593017	796.9261553476806	1905.5171278305277	1404.443192072687	1188.3197078311532	860.3349782063059	814.9634425665187	1202.8528543637126	1022.1629539838408	1533.8634392898962	0.7101138916666246	0.5195548279816999	1.2422990724080945	0.91562466129506	0.774723275483564	0.5608941162354055	0.5313142106991003	0.7841981388646793	0.6663976256302532	1.0	10.582954329283126														
AGADGPPAPPGAPQAPS(ph)PPQGSPQDQHHFLR	ddPTM_K562_Methotrexat_30min_R1	1	AGADGPPAPPGAPQAPSPPQGSPQDQHHFLR	31	0	Q96RY5	Q96RY5	CRAMP1L	Protein cramped-like	1	AGADGPPAPPGAPQAPS(1)PPQGSPQDQHHFLR	114.2	2.5035e-18	20751000.0	918.83	804.29	974.4	904.59	897.65	752.61	797.59	1068.1	978.24	1141.0	True	False	878.4393333759771	937.1852519075119	769.8867559638705	825.2859991665784	1015.7067089455669	898.0412309785552	976.4698606766566	1030.5343175951562	932.7618359189853	934.3538434839419	0.9401570288409417	1.00303033849897	0.8239777267819438	0.8832692292347403	1.0870685833091702	0.9611361233662964	1.0450750189410856	1.1029379552318044	0.9982961406151866	1.0	9.867825197488436	-7.754814211876806	24.999996199631408	1.0346345305479787	0.9127364890062891	0.50980674849529	0.05753004441271866	134.66945771751944	508170.5840829632	0.01769683499534176	0.0223174465798205	1.758675802189041e-08	7.754814211876806	-0.1218980415416896	
AGAGMIT(ph)QHSSNASPINR	ddPTM_K562_Methotrexat_30min_R1	1	AGAGMITQHSSNASPINR	18	0	H0YKH2;H7C3F4;Q9NWH9-3;Q9NWH9	H0YKH2	SLTM	SAFB-like transcription modulator	1	AGAGMIT(0.988)QHS(0.01)S(0.002)NASPINR	95.236	0.010397	41270000.0	1642.8	1425.0	2346.2	1775.8	1387.1	1679.1	1411.3	1760.4	1692.1	1647.2	True	False	1570.5844790331778	1660.4570291414855	1853.7646827200654	1620.118371107365	1569.5279629904696	2003.5623110722577	1727.8199505672906	1698.4857341957813	1613.4346403321424	1348.8761183056533	1.1643652502395967	1.2309929774924138	1.3743031384146762	1.2010875936794134	1.163581993698562	1.4853567973232167	1.2809330131351389	1.259185859357699	1.1961325569013748	1.0	10.397542140944648	-12.174342338520397	5.551969392061762	0.9999930532862609	1.2665664386419961	0.4023434262033043	0.09555210606103316	8.336463560160479e-06	1.2396070727844256e-06	0.0938716782277044	0.022766633312063293	6.693567718451551e-13	12.174342338520397	0.26657338535573527	
AGAGMITQHS(ph)SNASPINR	ddPTM_K562_Methotrexat_30min_R1	3	AGAGMITQHSSNASPINR	18	0	H0YKH2;H7C3F4;Q9NWH9-3;Q9NWH9	H0YKH2	SLTM	SAFB-like transcription modulator	1	AGAGMIT(0.001)QHS(0.835)S(0.132)NAS(0.032)PINR;AGAGMITQHS(0.347)S(0.347)NAS(0.306)PINR;AGAGMITQHS(0.442)S(0.181)NAS(0.377)PINR	152.13	7.521699999999999e-15	508630000.0	8156.1	6363.200000000001	8474.5	8493.3	7098.0	6870.1	7121.8	7741.0	8111.499999999999	9207.6	True	False	7797.5676098383865	7414.610644093403	6695.81826089472	7748.705575698942	8031.511413240834	8197.649594007218	8719.044940090787	7468.744642359433	7734.398135485007	7540.014416531767	1.0341581831384732	0.9833682317419166	0.8880378592133571	1.0276778196484098	1.0651851534436647	1.087219352795077	1.1563697969826094	0.990547793381393	1.0257802847865976	1.0	12.880351566596213	-7.50921672701451	20.297785642040477	1.0591958974761868	0.9679813127972521	0.3219010806608936	0.055321210086794026	61.138433551850426	90833.0195196214	0.016536252612843753	0.023316579795586354	3.095873972268173e-08	7.50921672701451	-0.09121458467893473	
AGAGMITQHSS(ph)NASPINR	ddPTM_K562_Methotrexat_30min_R1	1	AGAGMITQHSSNASPINR	18	0	H0YKH2;H7C3F4;Q9NWH9-3;Q9NWH9	H0YKH2	SLTM	SAFB-like transcription modulator	1	AGAGMITQHS(0.108)S(0.784)NAS(0.108)PINR	168.62	6.445300000000001e-11	56791000.0	2450.9	1596.8	2342.8	2357.2	2128.0	1711.6	1884.3	2327.5	2428.3	2406.7	True	False	2343.1613706247963	1860.644059040789	1851.0782962563158	2150.547935789098	2407.8692994331477	2042.3424761070075	2306.902241092571	2245.6405057604416	2315.4088630214187	1970.8233086001799	1.1889251362107534	0.9440948109967057	0.9392411223160763	1.091192663697778	1.221758078933717	1.0362889799378443	1.1705271756355968	1.1394428389196678	1.1748434539603594	1.0	10.94458272404053	-7.511746038523654	24.58084359643123	1.1312632419672546	1.015942635526983	0.19697641258637666	0.08883436237896274	581.5849735683283	1284131.8165044466	0.024709892221379905	0.034293215495995046	3.0778961434884613e-08	7.511746038523654	-0.11532060644027164	
AGAGMITQHSSNAS(ph)PINR	ddPTM_K562_Methotrexat_30min_R1	4	AGAGMITQHSSNASPINR	18	0	H0YKH2;H7C3F4;Q9NWH9-3;Q9NWH9	H0YKH2	SLTM	SAFB-like transcription modulator	1	AGAGMITQHS(0.056)S(0.376)NAS(0.568)PINR;AGAGMITQHS(0.033)S(0.033)NAS(0.934)PINR;AGAGMITQHSS(0.002)NAS(0.997)PINR;AGAGMITQHSSNAS(1)PINR	226.08	1.0137e-44	371582000.0	9144.0	7843.699999999999	10315.699999999999	9950.6	8365.8	7997.4	7616.799999999999	9567.0	9764.1	11088.599999999999	True	False	8742.040708716446	9139.738104896182	8150.575542381464	9078.246347303158	9466.049335149359	9542.78436458178	9325.061290640499	9230.523187372783	9310.169122195537	9080.3470892691	0.9627430122189431	1.00654061073252	0.8976061666203912	0.9997686495961785	1.042476597214667	1.0509272686128017	1.0269498730572308	1.016538585653973	1.0253098290921097	1.0	13.148531729138286	-7.515372026718505	20.985629210597757	1.0283304054582567	0.9587153763974744	0.5690503594543302	0.0277510936997698	29.654856091566554	82902.7365799729	0.007944649083564742	0.01076729231191168	3.052305317523958e-08	7.515372026718505	-0.06961502906078232	
AGAPGALS(ph)PSYDGGLHGLQSK	ddPTM_K562_Methotrexat_30min_R1	4	AGAPGALSPSYDGGLHGLQSK	21	0	K7ENH8;A0A0A0MRB7;P15923-2;X6REB3;P15923;P15923-3	K7ENH8	TCF3	Transcription factor E2-alpha	1	AGAPGALS(0.976)PS(0.024)YDGGLHGLQSK;AGAPGALS(0.958)PS(0.042)YDGGLHGLQSK;AGAPGALS(0.749)PS(0.251)YDGGLHGLQSK;AGAPGALS(0.996)PS(0.004)YDGGLHGLQSK	229.96	5.7253e-52	347787000.0	17594.6	13778.4	23901.9	19649.4	13645.6	11732.6	12409.300000000001	16414.1	16791.199999999997	21925.1	True	False	16821.162451179178	16055.046407244246	18885.21782878984	17926.767609661587	15440.235579109489	13999.758901129399	15192.401411871808	15836.806799399548	16010.580776990175	17954.251931437135	0.9368901870941242	0.8942197351666065	1.0518521128537035	0.9984692026222811	0.8599765469523288	0.7797461545371552	0.8461728993158749	0.8820644190510645	0.8917431279303999	1.0	14.132037923541223	-7.769207063133484	24.949261052421942	0.8643546280740807	0.9707403991710402	0.32819797345551927	0.0642814293196927	182.99415906507554	587763.3867691237	0.020262896331830153	0.023403803479530746	1.7013471458729532e-08	7.769207063133484	0.10638577109695946	
AGAPVGGS(ph)PGLAK	ddPTM_K562_Methotrexat_30min_R1	2	AGAPVGGSPGLAK	13	0	A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2	A0A0A0MS59	SRCAP	Helicase SRCAP	1	AGAPVGGS(1)PGLAK;AGAPVGGS(1)PGLAK	152.16	6.5872e-09	23817800.0	5257.299999999999	3943.6000000000004	6404.1	5157.6	3878.7	3247.8	3609.5	4257.2	4487.4	5749.299999999999	True	False	5026.195386913272	4595.212870261308	5059.966927204659	4705.441215690584	4388.8170355786415	3875.3913846110877	4419.022257190273	4107.471862996069	4278.781753458107	4708.046058143934	1.0675756619285843	0.9760339668539462	1.0747488161149095	0.9994467253673434	0.9321950085825748	0.8231421988549734	0.9386106683358142	0.8724366355530874	0.9088232571677396	1.0	12.200912718787556	-7.747400187795821	3.1382882173566418	0.9006505720178751	1.0331505119309436	0.5753874336564433	0.049794891527488915	0.1618492201899156	3.2943686147545455	0.01484906575745277	0.01864185514766252	1.7889566307788027e-08	7.747400187795821	0.13249993991306852	
AGDLLEDS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	AGDLLEDSPK	10	0	P51858-2;P51858;P51858-3	P51858-2	HDGF	Hepatoma-derived growth factor	1	AGDLLEDS(1)PK;AGDLLEDS(1)PK	145.31	3.4805999999999995e-07	67742000.0	8280.0	5882.1	13090.1	8435.0	6282.200000000001	5132.0	5355.200000000001	7738.4	7612.5	10396.7	True	False	7916.021114192063	6854.017046395176	10342.66689680076	7695.516646182352	7108.419413956264	6123.686367948792	6556.239920128923	7466.236085833126	7258.5965365690245	8513.75688391718	0.9297917737286739	0.8050520046376568	1.21481820984793	0.9038919892955228	0.8349333332954746	0.7192695835039259	0.7700760086905837	0.8769613917373115	0.8525726815480011	1.0	13.055580178237799	-7.521666068412832	16.72804364533581	0.8302961059971735	0.9810613636164774	0.22337305670819763	0.11648960825840457	0.9351969418869546	12861.088057731466	0.034399492643853356	0.04561267107741539	3.0083885812656366e-08	7.521666068412832	0.15076525761930393	
AGDLLEDS(ph)PKRPK	ddPTM_K562_Methotrexat_30min_R1	1	AGDLLEDSPKRPK	13	2	P51858-2;P51858;P51858-3	P51858-2	HDGF	Hepatoma-derived growth factor	1	AGDLLEDS(1)PKRPK	111.64	0.031813	35197000.0	2030.0	1299.9	4358.8	2952.0	1352.4	1136.8	1197.4	1769.7	1848.4	3134.5	True	False	1940.763630653367	1514.6863804779057	3443.9474465263947	2693.2027432756727	1530.264304771331	1356.4705111231865	1465.9474306024752	1707.458647924491	1762.4682874475102	2566.811676073985	0.7560989568279598	0.5901042116165934	1.3417219029461542	1.0492404909872495	0.5961731898897685	0.5284651475475398	0.57111608314198	0.6652060468012597	0.6866371630906939	1.0	11.325761735635476	-7.768797974180527	24.996237933536822	0.6453789763602222	0.9388087794214605	0.24645381392574484	0.21885347799742777	227.19095623896746	771737.9603490942	0.07040003187846178	0.08141540081121916	1.7029505054789385e-08	7.768797974180527	0.2934298030612382	
AGDNSQSVYIPMS(ph)PGAHHFDSLGYPSTTLPVHR	ddPTM_K562_Methotrexat_30min_R1	4	AGDNSQSVYIPMSPGAHHFDSLGYPSTTLPVHR	33	0	Q9UQC2;Q9UQC2-2	Q9UQC2	GAB2	GRB2-associated-binding protein 2	1	AGDNSQSVY(0.03)IPMS(0.968)PGAHHFDS(0.001)LGYPSTTLPVHR;AGDNSQSVY(0.002)IPMS(0.972)PGAHHFDS(0.026)LGY(0.001)PSTTLPVHR;AGDNSQSVY(0.018)IPMS(0.981)PGAHHFDS(0.001)LGYPSTTLPVHR;AGDNSQSVY(0.009)IPMS(0.991)PGAHHFDSLGYPSTTLPVHR	115.47	1.7079e-17	73428800.0	4846.2	3853.78	4349.64	4695.120000000001	3671.5200000000004	3528.49	3753.16	4612.700000000001	4390.0	6338.4	True	False	4633.166850676034	4490.55164194026	3436.710005347585	4283.5061192440635	4154.389234142292	4210.320754568128	4594.901669149814	4450.468726496754	4185.90985819875	5190.4543396482195	0.8926322336148409	0.8651557933259085	0.6621212287902539	0.8252661210260017	0.8003902861466754	0.811166129023973	0.8852600116430714	0.8574333642627483	0.8064630924934498	1.0	12.341645113200642	-8.732076119520123	7.477531921967417	0.87543423305493	0.8053959133482016	0.20802359180791752	0.07269969076413564	0.3509619759789242	68.19972698399631	0.028541623609515173	0.021625137465163813	1.853206780296206e-09	8.732076119520123	-0.07003831970672836	
AGDPGEMPQS(ph)PTGLGQPK	ddPTM_K562_Methotrexat_30min_R1	3	AGDPGEMPQSPTGLGQPK	18	0	J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9;H0YHL2	J3KPG5	BAZ2A	Bromodomain adjacent to zinc finger domain protein 2A	1	AGDPGEMPQS(0.793)PT(0.207)GLGQPK;AGDPGEMPQS(0.5)PT(0.5)GLGQPK;AGDPGEMPQS(0.879)PT(0.121)GLGQPK	148.06	3.3836e-12	77061000.0	16454.8	11602.1	22176.5	15578.0	10631.8	9763.9	9542.2	12923.9	13310.099999999999	16834.2	True	False	15731.466694421197	13519.149823019243	17521.955709803733	14212.300926405293	12030.06805343672	11650.635488701331	11682.281252960525	12469.359111663747	12691.31635617567	13785.363253266774	1.1411717199902764	0.9806886894921361	1.271055059477775	1.030970360758346	0.8726696447832745	0.8451453381861688	0.8474409443067905	0.9045361288327917	0.9206370643274965	1.0	13.750849663348898	-7.606799696337957	4.283929821667278	0.889255141854671	1.1211425955976035	0.6427317512143786	0.07797053404672422	0.12884399394526846	4.422008073172856	0.022869816777189887	0.03017647365657531	2.4728644072322368e-08	7.606799696337957	0.23188745374293251	
AGDTS(ph)DQEGHSLEEK	ddPTM_K562_Methotrexat_30min_R1	1	AGDTSDQEGHSLEEK	15	0	A0A087WU18;Q99607	A0A087WU18	ELF4	ETS-related transcription factor Elf-4	1	AGDT(0.24)S(0.759)DQEGHSLEEK	97.384	0.008334200000000002	0.0	3915.8	2618.1	5871.3	4284.0	2727.6	2662.9	2503.1	3081.3	3613.2	4437.9	True	False	3743.6661206465315	3050.6965249089967	4638.994366061855	3908.4283713390882	3086.327209179443	3177.4677375703127	3064.4838930524925	2972.928932502535	3445.223120647774	3634.153305869754	1.0301343409481092	0.839451797474152	1.2764993591682325	1.0754715176782264	0.8492561951623003	0.8743350844440659	0.8432456297599906	0.8180527023174193	0.9480125989960779	1.0	11.827403565255825	-7.759934834789611	24.99888198378489	0.8767169906003089	1.0557587528145456	0.3497635108514988	0.1105276886741794	44.344819295899256	736803.6663586104	0.03393965828735602	0.04148594576558458	1.7380616026201434e-08	7.759934834789611	0.17904176221423662	
AGDVY(ph)YREAT(ph)DPAMLR	ddPTM_K562_Methotrexat_30min_R1	1	AGDVYYREATDPAMLR	16	1	Q8TER0-5;Q8TER0-3;Q8TER0-4;Q8TER0	Q8TER0-5	SNED1	Sushi, nidogen and EGF-like domain-containing protein 1	2	AGDVY(0.5)Y(0.5)REAT(1)DPAMLR	59.63399999999999	0.031113	15435000.0	307.77	271.1	263.4	235.56	354.65	427.13	340.66	339.53	368.83	436.12	True	False	294.2407993133924	315.89466708789956	208.11593957397727	214.90882053049378	401.2926912800593	509.6668274243899	417.0616767237672	327.58853745256386	351.6831738039739	357.1344419107949	0.8238936511950531	0.8845259096203434	0.5827383616670623	0.6017588765190386	1.123646011661609	1.4271007430632932	1.1678002112939332	0.917269518167584	0.9847360896427272	1.0	8.480323463373368	-7.772179782409095	24.98826346604429	1.118691490976635	0.7247153376573215	0.5892897052665806	0.15517944001126713	160.46610644059055	373333.8586628827	0.0536674955026818	0.06145847316870675	1.689741294276914e-08	7.772179782409095	-0.39397615331931346	
AGELTEDEVER	ddPTM_K562_Methotrexat_30min_R1	1	AGELTEDEVER	11	0	P62269	P62269	RPS18	40S ribosomal protein S18	0		192.12	7.4938999999999995e-06	29731000.0	1685.8	1352.3	1933.1	1780.1	1459.3	1250.1	1458.2	1525.4	1764.4	1985.6	False	True	1611.6942505199254	1575.7445898301964	1527.3687273745454	1624.041396783544	1651.2235285069519	1491.6641326135596	1785.2384694375558	1471.7508173950505	1682.3734291129574	1625.988599142609	0.9912088260457539	0.9690994086066124	0.9393477470751848	0.9988024501770235	1.0155197455736462	0.9173890477461654	1.0979403363460973	0.9051421505483563	1.0346772603449252	1.0	10.66710142644275	-7.303637281536107	24.461370474944818	0.9935168486722964	0.9668066804034389	0.05844265018137651	0.05302149142466016	1199.8453882766255	695525.8592640442	0.014001286338801062	0.02076743020589429	4.9700724370017424e-08	7.303637281536107	-0.026710168268857526	
AGEPNS(ph)PDAEEANS(ph)PDVTAGCDPAGVHPPR	ddPTM_K562_Methotrexat_30min_R1	5	AGEPNSPDAEEANSPDVTAGCDPAGVHPPR	30	0	Q08J23-3;Q08J23-2;Q08J23	Q08J23-3	NSUN2	tRNA (cytosine(34)-C(5))-methyltransferase	2	AGEPNS(1)PDAEEANS(1)PDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANS(0.975)PDVT(0.025)AGCDPAGVHPPR;AGEPNS(0.979)PDAEEANS(0.985)PDVT(0.036)AGCDPAGVHPPR;AGEPNS(0.998)PDAEEANS(0.998)PDVT(0.004)AGCDPAGVHPPR;AGEPNS(0.992)PDAEEANS(0.984)PDVT(0.024)AGCDPAGVHPPR	119.46	1.2815999999999998e-13	565791000.0	4859.96	4324.3	5911.59	5458.53	4789.77	4214.740000000001	4251.45	4928.91	5075.97	6379.859999999999	True	False	4646.3219775517955	5038.817074467739	4670.828045657283	4979.989149814554	5419.708709749021	5029.1788547249635	5204.94588594863	4755.557441567216	4839.989262624402	5224.405531892606	0.8893494100310793	0.9644766363767258	0.894040100283949	0.9532164223113996	1.0373828518219306	0.962631791124201	0.9962752420681773	0.9102580977944216	0.9264191366995693	1.0	12.351051171619728	-7.512535363208278	24.944690901421154	0.970848440728507	0.9212776266831496	0.28962359333274135	0.03906824521195115	710.3898154291375	1713217.9366116468	0.011682703957239407	0.016113966584396077	3.072307186950732e-08	7.512535363208278	-0.04957081404535735	
AGEPNS(ph)PDAEEANSPDVTAGCDPAGVHPPR	ddPTM_K562_Methotrexat_30min_R1	4	AGEPNSPDAEEANSPDVTAGCDPAGVHPPR	30	0	Q08J23-3;Q08J23-2;Q08J23	Q08J23-3	NSUN2	tRNA (cytosine(34)-C(5))-methyltransferase	1	AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR;AGEPNS(0.966)PDAEEANS(0.033)PDVTAGCDPAGVHPPR	151.24	1.3785999999999998e-29	907211000.0	3434.7999999999997	3239.74	4493.66	4348.82	3122.1800000000003	2866.6699999999996	2953.3800000000006	3659.83	3585.0299999999997	4109.09	True	False	3283.8103047133905	3775.0519688356735	3550.5021754973345	3967.565702578626	3532.801395349713	3420.6134061589587	3615.750645225271	3531.1117044886096	3418.3627377991525	3364.8939831037987	0.9759030510923805	1.121893286323851	1.0551601902840129	1.1791057080850194	1.04989976299076	1.0165590426726503	1.074551133967698	1.0493976102128157	1.0158901751329574	1.0	11.716345335572017	-7.98178337992314	24.94417908473773	1.0366444959824523	1.087640347909321	0.17598889038344334	0.05182267990175773	409.27843895101256	560426.0000804458	0.015610140575872778	0.01769705784258095	1.0428374525806284e-08	7.98178337992314	0.05099585192686873	
AGEPNSPDAEEANS(ph)PDVTAGCDPAGVHPPR	ddPTM_K562_Methotrexat_30min_R1	5	AGEPNSPDAEEANSPDVTAGCDPAGVHPPR	30	0	Q08J23-3;Q08J23-2;Q08J23	Q08J23-3	NSUN2	tRNA (cytosine(34)-C(5))-methyltransferase	1	AGEPNSPDAEEANS(0.954)PDVT(0.046)AGCDPAGVHPPR;AGEPNSPDAEEANS(0.998)PDVT(0.002)AGCDPAGVHPPR;AGEPNSPDAEEANS(1)PDVTAGCDPAGVHPPR;AGEPNSPDAEEANS(1)PDVTAGCDPAGVHPPR;AGEPNSPDAEEANS(0.999)PDVT(0.001)AGCDPAGVHPPR	174.49	1.5803e-76	27149000.0	3028.4300000000003	2484.34	3486.6500000000005	3203.8799999999997	2318.95	2743.87	2373.95	2526.76	2709.7799999999997	2972.52	True	False	2895.303843339694	2894.8349584402504	2754.8498128914475	2923.0008147446006	2623.932571391212	3274.0840441199643	2906.3687179545236	2437.892418618799	2583.8029192596377	2434.167823692278	1.1894429854667703	1.1892503591018664	1.131741939104569	1.2008214003547357	1.077958777472906	1.3450527166831314	1.1939886353217772	1.001530130704329	1.0614727933345143	1.0	11.249212922747407	-9.257624444966353	24.383078955737254	1.0236260881879935	1.1895998386826365	0.5838972192716066	0.06526943528340852	166.80281612590397	1066128.6700947583	0.03217341862005445	0.017660457029076534	5.525550533011439e-10	9.257624444966353	0.16597375049464302	
AGEPNSPDAEEANSPDVT(ph)AGCDPAGVHPPR	ddPTM_K562_Methotrexat_30min_R1	1	AGEPNSPDAEEANSPDVTAGCDPAGVHPPR	30	0	Q08J23-3;Q08J23-2;Q08J23	Q08J23-3	NSUN2	tRNA (cytosine(34)-C(5))-methyltransferase	1	AGEPNSPDAEEANS(0.113)PDVT(0.886)AGCDPAGVHPPR	110.01	4.2858e-12	137320000.0	1571.1	1221.2	1945.6	1317.6	1315.1	992.88	1220.8	1606.8	1451.1	1696.7	True	False	1502.0363251820231	1422.9825431491802	1537.2451481971532	1202.0880537059716	1488.0587009795745	1184.7400079908418	1494.5954762648257	1550.2879332570894	1383.6386777294329	1389.4111886408461	1.0810596153694065	1.02416228887661	1.106400438376289	0.8651780434285128	1.0709995091051683	0.8526921459080674	1.0757042180773522	1.1157877134799934	0.9958453545224002	1.0	10.440257904877202	-12.166169712644031	14.211851820760211	1.0000006402100328	1.0198356511051063	0.00483889916385738	0.08867798637613511	0.0	0.0	0.08414682335991379	0.0204086023984186	6.820721034172876e-13	12.166169712644031	0.019835010895073557	
AGEQQLS(ph)EPEDMEMEAGDTDDPPR	ddPTM_K562_Methotrexat_30min_R1	3	AGEQQLSEPEDMEMEAGDTDDPPR	24	0	Q93009;H3BMF6	Q93009	USP7	Ubiquitin carboxyl-terminal hydrolase 7	1	AGEQQLS(0.998)EPEDMEMEAGDT(0.002)DDPPR;AGEQQLS(0.938)EPEDMEMEAGDT(0.062)DDPPR;AGEQQLS(0.995)EPEDMEMEAGDT(0.005)DDPPR	73.548	0.0021559	20328000.0	5525.700000000001	4156.14	5904.4	5228.240000000001	4440.34	4530.91	4569.49	5380.9	5324.91	5984.6	True	False	5282.796844286362	4842.871492699011	4665.147128400116	4769.888316566262	5024.322539964748	5406.444232541481	5594.314451865463	5191.650697076848	5077.356096360162	4900.730948040318	1.0779610022049513	0.9881937090701859	0.9519288403836154	0.973301404859539	1.0252190118647202	1.103191399377553	1.141526541893203	1.0593625220647669	1.0360405723539	1.0	12.258781229087202	-8.047749667015617	4.8770649517458535	1.0758497896327592	0.9941644733058534	0.326870615493954	0.04688232107054884	0.22297702917135007	11.925870078984874	0.016139110043981653	0.016633198820683183	8.958810142104443e-09	8.047749667015617	-0.08168531632690579	
AGGAS(ph)PAASSTAQPPTQHR	ddPTM_K562_Methotrexat_30min_R1	3	AGGASPAASSTAQPPTQHR	19	0	Q8IU81	Q8IU81	IRF2BP1	Interferon regulatory factor 2-binding protein 1	1	AGGAS(1)PAASSTAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR	171.59	5.0335e-12	84996700.0	5211.12	3978.64	5408.83	4864.860000000001	3894.4800000000005	3834.73	3718.62	4525.32	4987.22	4738.64	True	False	4982.045404418904	4636.042634683145	4273.590499035366	4438.365276982415	4406.672382169364	4575.737300421725	4552.615194911453	4366.161930624207	4755.36523075307	3880.4263776395696	1.283891232449935	1.1947250594413312	1.1013198249711298	1.1437828849318963	1.1356155105949737	1.1791841553260205	1.1732255045850837	1.1251758197974384	1.2254749267130067	1.0	11.921999467772892	-13.385742034723824	2.002756866565195	1.8438872946215058e-05	1.1688298214391974	0.5141298979376301	0.0504368168173268	778348.7600381675	80673.0323529809	3525449.3302245303	0.012908191387551548	4.11394011239078e-14	13.385742034723824	1.1688113825662512	
AGGGGGLGAGS(ph)PALSGGQGR	ddPTM_K562_Methotrexat_30min_R1	3	AGGGGGLGAGSPALSGGQGR	20	0	A0A3B3ITT1;Q6IQ22	A0A3B3ITT1	RAB12	Ras-related protein Rab-12	1	AGGGGGLGAGS(1)PALSGGQGR;AGGGGGLGAGS(1)PALSGGQGR;AGGGGGLGAGS(0.981)PALS(0.019)GGQGR	195.45	1.7154e-16	113342000.0	4910.200000000001	4632.299999999999	4998.700000000001	5123.2	3795.9700000000003	4640.9	4290.3	4915.7	4698.45	5510.9	True	False	4694.35348730747	5397.708839362877	3949.5411812772986	4674.057010281142	4295.206590493069	5537.688243377545	5252.50898740087	4742.812044754716	4480.0200850236715	4512.822608287167	1.040225573831984	1.1960826533377893	0.8751820144723879	1.0357280611247361	0.9517782911753551	1.2271008023245487	1.1639077010816627	1.0509635446439232	0.9927312624247056	1.0	12.139814354332746	-8.218014828024053	24.99983498807555	1.0949367030689396	1.022443502644018	0.09758373124095676	0.10046875486631007	1154.7578920930857	664802.7671543261	0.03422583697194329	0.03422564811964966	6.053202070821058e-09	8.218014828024053	-0.07249320042492169	
AGGKPSQSPS(ph)QEAAGEAVLGAK	ddPTM_K562_Methotrexat_30min_R1	2	AGGKPSQSPSQEAAGEAVLGAK	22	1	P00519-2;P00519	P00519-2	ABL1	Tyrosine-protein kinase ABL1	1	AGGKPS(0.002)QS(0.074)PS(0.925)QEAAGEAVLGAK;AGGKPS(0.01)QS(0.051)PS(0.939)QEAAGEAVLGAK	100.28	3.942e-05	27941000.0	6103.1	4134.2	9627.3	6505.1	4218.7	3791.3	3485.1000000000004	5006.299999999999	5008.1	8005.7	True	False	5834.815031645599	4817.306280615245	7606.661294838842	5934.807982819305	4773.532995074543	4523.915067576828	4266.722390506671	4830.225591402149	4775.274524110516	6555.790153180895	0.8900246797580189	0.7348170347212638	1.1602966411528686	0.9052772959701453	0.7281399928212171	0.6900640444358651	0.650832667125021	0.7367877065220741	0.7284056402863253	1.0	12.67855396005575	-7.736102563747707	6.060338172420016	0.7336820281750444	0.9277581483473782	0.27063014794344264	0.13142817863137923	0.20526577637945956	23.4048363988599	0.039041462401643856	0.04908839415853495	1.8361046744372282e-08	7.736102563747707	0.1940761201723339	
AGGLDWPEATEVS(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	2	AGGLDWPEATEVSPSR	16	0	Q9Y446;Q9Y446-2;E9PKC4;E9PK71;E9PJR7;E9PRW6	Q9Y446	PKP3	Plakophilin-3	1	AGGLDWPEATEVS(0.975)PS(0.025)R;AGGLDWPEATEVS(0.978)PS(0.022)R	284.53	3.010699999999999e-149	546680000.0	7891.0	7063.6	9833.9	8388.4	7522.1	6674.2	6746.299999999999	8829.1	8175.3	10013.7	True	False	7544.121088416612	8230.739839328982	7769.898778194894	7653.001995831183	8511.387996835563	7963.894691536217	8259.329506491966	8518.575548618479	7795.232087410534	8200.121895263068	0.9200010908099543	1.0037338401132307	0.9475345461246497	0.9332790528701851	1.037958716412777	0.9711922326589667	1.0072203330615244	1.0388352340883336	0.9506239281532601	1.0	13.001429640293352	-7.750087327050105	24.99937224602155	1.0017369598894506	0.9546367132854471	0.3626343146055069	0.03222367942324907	254.0272339361702	559413.809604071	0.009197358729566216	0.011763233831547145	1.7779218731837042e-08	7.750087327050105	-0.04710024660400347	
AGGPATPLS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	1	AGGPATPLSPTR	12	0	Q03252	Q03252	LMNB2	Lamin-B2	1	AGGPATPLS(0.851)PT(0.149)R	126.34	0.00048204	26975000.0	1277.2	1094.7	1491.9	1487.2	1068.6	1193.3	1347.5	1125.5	1448.7	1645.8	True	False	1221.0558172760996	1275.5805682815324	1178.7705780198044	1356.8194850269588	1209.139630345048	1423.8883364912892	1649.7111764964375	1085.9155270605272	1381.3502532055877	1347.72967187193	0.9060094488979481	0.9464661904414511	0.8746342850658992	1.0067445373836754	0.8971677745030373	1.0565088579771185	1.22406682209873	0.8057368994126576	1.0249460867675046	1.0	10.396315433881826	-8.260693197264407	24.9930745534048	1.0227237332544186	0.9289395392902862	0.18695386732806196	0.10006506212853365	127.87872415587269	4283293.865093446	0.03469643497222224	0.03274931989340674	5.486644262168329e-09	8.260693197264407	-0.0937841939641324	
AGGPATPLSPT(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	AGGPATPLSPTR	12	0	Q03252	Q03252	LMNB2	Lamin-B2	1	AGGPATPLS(0.228)PT(0.772)R;AGGPATPLS(0.212)PT(0.788)R	141.73	5.3082e-06	44526000.0	3086.8999999999996	2962.6	4018.2	3449.8999999999996	2984.5	3088.3	2489.7	3383.0	3335.6000000000004	3424.8999999999996	True	False	2951.203572149694	3452.119294410222	3174.8347319519944	3147.452623315292	3377.0140621044325	3685.0702669790057	3048.0786019467023	3264.0179724973473	3180.5286840564354	2804.6174220404496	1.0522660056795192	1.230869945854752	1.132002784765631	1.1222395605834248	1.2040908095220866	1.3139297495691937	1.0868072693241444	1.16380150349443	1.134032991117376	1.0	11.453588270837121	-10.475898986977244	1.1157431986504727	0.9999268603582145	1.16925185152926	0.3226263932432456	0.07059079843358766	2.158419901737442	3.8573615507506704	0.06790759684194707	0.02102338799327148	3.3427277985198165e-11	10.475898986977244	0.1693249911710455	
AGGPTT(ph)PLS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	1	AGGPTTPLSPTR	12	0	P20700;E9PBF6;A0A0D9SFY5;A0A0D9SFE5	P20700	LMNB1	Lamin-B1	2	AGGPT(0.001)T(0.992)PLS(0.951)PT(0.056)R	129.76	0.0027754000000000003	53268000.0	6370.6	5579.9	7116.4	6770.9	5147.9	4558.3	5218.5	6072.3	5534.2	6565.7	True	False	6090.55605194106	6501.883632916892	5622.764891360101	6177.305709500423	5824.939082026272	5439.126962396918	6388.881465340752	5858.733767187595	5276.916249941577	5376.588107066186	1.1327920105943285	1.2092954683234494	1.0457868037111446	1.148926714579808	1.083389496467256	1.0116316991529517	1.188278019092472	1.0896750226203396	0.9814618759816071	1.0	12.392475237649059	-3.0000000000546403	0.07140500002102745	0.8820206763421959	1.5982119996407043	0.3416724278024632	0.06136826689487342	291.1006387415326	1.5356791057614536	2.63583948596514	20.89128352283836	0.0009999999998741862	3.0000000000546403	0.7161913232985083	
AGGPTT(ph)PLSPTR	ddPTM_K562_Methotrexat_30min_R1	2	AGGPTTPLSPTR	12	0	P20700;E9PBF6;A0A0D9SFY5;A0A0D9SFE5	P20700	LMNB1	Lamin-B1	1	AGGPT(0.024)T(0.976)PLSPTR;AGGPT(0.296)T(0.704)PLSPTR	137.01	1.6348e-05	35109000.0	5632.9	5295.299999999999	6263.3	5692.5	4836.9	4505.4	4578.2	5168.4	4975.4	5328.299999999999	True	False	5385.284460644017	6170.258320289761	4948.718923058811	5193.447363176409	5473.037130840318	5376.004786078822	5604.977891084224	4986.624442522993	4744.0947399731385	4363.293237717344	1.234224739720067	1.4141287289500926	1.1341706031308894	1.1902586143610556	1.2543363080734717	1.232097980398695	1.2845751100644494	1.1428579677885105	1.0872738735421346	1.0	12.091201718813021	-9.716065762197605	1.6669816400740458	1.0072957202590942	1.2488315230311893	0.5942260841419247	0.06934011822356713	0.25223418472028214	1.3414774227405144	0.06600725061082863	0.020000529354984385	1.9228005505299309e-10	9.716065762197605	0.24153580277209508	
AGGPTTPLS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	2	AGGPTTPLSPTR	12	0	P20700;E9PBF6;A0A0D9SFY5;A0A0D9SFE5	P20700	LMNB1	Lamin-B1	1	AGGPTT(0.001)PLS(0.791)PT(0.207)R;AGGPTT(0.002)PLS(0.989)PT(0.009)R	101.56	0.0066451999999999995	129274000.0	2757.2	2197.12	3213.0	2464.5299999999997	2650.3999999999996	2200.2	2127.12	2407.55	2678.4	3023.3999999999996	True	False	2635.9967893780604	2560.1567353455025	2538.6352082429353	2248.4684813296717	2998.9740560233176	2625.357511060198	2604.180807234955	2322.875101887669	2553.881768610373	2475.8329626549953	1.0646908855076036	1.0340587486968755	1.0253661077040483	0.9081664697276242	1.2112990259275507	1.0603936334399788	1.051840268110141	0.938219636350871	1.03152426158495	1.0	11.2736982680033	-9.221014862826761	23.19038315653068	0.9886539457819679	1.0502588558207622	0.13059613308781748	0.07199304937866859	450.18532517354373	258258.46124566242	0.034509476745349175	0.019923488946701852	6.011531639125916e-10	9.221014862826761	0.061604910038794314	
AGGPTTPLSPT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	AGGPTTPLSPTR	12	0	P20700;E9PBF6;A0A0D9SFY5;A0A0D9SFE5	P20700	LMNB1	Lamin-B1	1	AGGPT(0.001)T(0.002)PLS(0.197)PT(0.8)R	99.844	0.019351	85676000.0	1565.9	1427.3	2086.9	1590.1	1760.1	1752.2	1380.6	1613.3	1694.6	1738.6	True	False	1497.0649109557178	1663.1370650481697	1648.8882091759046	1450.698401789515	1991.584000908029	2090.787851504265	1690.2346940786515	1556.5593245728544	1615.8184158778142	1423.7226926215437	1.0515143986355424	1.1681608178807525	1.1581526498954349	1.0189473057553786	1.3988566813112076	1.4685358759397407	1.187193758193438	1.093302321189188	1.1349249571224849	1.0	10.47545245558772	-9.785371689065295	1.5252390126224398	1.0186851378392332	1.209997326320278	0.1748134904141967	0.1331245395017138	0.7115214222132459	3.3645598756541193	0.13831699505534578	0.04198719094779552	1.6391862821666305e-10	9.785371689065295	0.1913121884810447	
AGGSAALS(ph)PSK	ddPTM_K562_Methotrexat_30min_R1	4	AGGSAALSPSK	11	0	Q92522	Q92522	H1FX	Histone H1x	1	AGGSAALS(0.979)PS(0.02)K;AGGSAALS(0.979)PS(0.021)K;AGGSAALS(0.988)PS(0.012)K;AGGSAALS(0.944)PS(0.056)K	160.22	1.8164e-07	724354000.0	25831.699999999997	19388.0	36707.2	27331.7	19129.899999999998	16856.7	16405.1	22330.6	23207.9	29056.9	True	False	24696.169398004236	22591.53746034744	29002.860353568325	24935.57229620179	21645.817157531095	20114.018705885126	20084.361277581964	21545.220140895424	22128.969794553712	23794.413842882186	1.037897783953682	0.9494471101293982	1.2188936674413682	1.0479590907704148	0.9097016341928583	0.8453252447696665	0.8440788417904214	0.905473876480484	0.9300069310668616	1.0	14.538335294800833	-7.756705869157674	4.822474178618995	0.8937167666609241	1.0684124156563817	0.5172306315678787	0.07442791108892864	0.14604491487450802	8.896995019113373	0.023284083627611897	0.028582112687375795	1.7510321934583774e-08	7.756705869157674	0.17469564899545753	
AGIKHTDVSSFQT(ph)MDQMVS(ph)NMR	ddPTM_K562_Methotrexat_30min_R1	1	AGIKHTDVSSFQTMDQMVSNMR	22	1	A0A499FJ64	A0A499FJ64			2	AGIKHT(0.007)DVS(0.07)S(0.214)FQT(0.722)MDQMVS(0.986)NMR	43.696000000000005	0.025537	5444600.0	135.02	0.0	0.0	0.0	136.84	0.0	0.0	0.0	0.0	136.0	True	False	129.08468246838314	0.0	0.0	0.0	154.8368585218196	0.0	0.0	0.0	0.0	111.36908213305534	1.1590710814529523	0.0	0.0	0.0	1.3903038038585274	0.0	0.0	0.0	0.0	1.0	6.799204962450094	-12.53056956036842	3.8656651667777475	1.011244331073716	0.26583613122048005	0.15235976592628742	0.5056657160469488	255923072.716898	209547167.01298162	23077892.31296161	0.12279035578563283	2.9473413670598544e-13	12.53056956036842	-0.745408199853236	
AGKYVDEENS(ph)DGETSNHR	ddPTM_K562_Methotrexat_30min_R1	3	AGKYVDEENSDGETSNHR	18	1	H0YFD2;F8WFC1;A0A494C108;Q8N9T8;H0YH26	H0YFD2	KRI1	Protein KRI1 homolog	1	AGKY(0.017)VDEENS(0.982)DGET(0.001)SNHR;AGKYVDEENS(0.713)DGET(0.214)S(0.073)NHR;AGKYVDEENS(0.998)DGET(0.002)S(0.001)NHR	113.36	0.000463	75637000.0	6419.5	4888.4	9425.1	9866.1	5042.7	4923.6	4964.0	5274.5	5751.5	9202.8	True	False	6137.3064664922595	5696.125011407183	7446.900311612348	9001.154331108435	5705.903438088129	5875.016017387511	6077.303361876303	5088.992845384938	5484.114020371326	7536.083743044717	0.8143893666463788	0.7558468304793337	0.9881658120486414	1.194407418762547	0.7571443779873442	0.7795847575087981	0.8064272597136719	0.6752834786478754	0.7277140498117185	1.0	12.879599281327758														
AGKYVDEENSDGET(ph)SNHR	ddPTM_K562_Methotrexat_30min_R1	1	AGKYVDEENSDGETSNHR	18	1	H0YFD2;F8WFC1;A0A494C108;Q8N9T8;H0YH26	H0YFD2	KRI1	Protein KRI1 homolog	1	AGKYVDEENS(0.214)DGET(0.393)S(0.393)NHR	96.455	0.0076925	16053000.0	2433.0	1781.9	3047.2	3413.5	1716.1	1818.8	2033.8	1725.9	1946.4	3333.2	True	False	2326.0482331919425	2076.3286878787453	2407.6343624518727	3114.243754800645	1941.7972296791484	2170.2573589293193	2489.931421713139	1665.1991187505678	1855.9122888378256	2729.5251806316182	0.8521805366359323	0.7606922634794225	0.8820707643718241	1.1409470690722854	0.7114047686600979	0.7951043552663313	0.9122214513283821	0.6100691543593809	0.6799396107451785	1.0	11.414434291072226														
AGLESGAEPGDGDS(ph)DTTK	ddPTM_K562_Methotrexat_30min_R1	2	AGLESGAEPGDGDSDTTK	18	0	O60832	O60832	DKC1	H/ACA ribonucleoprotein complex subunit 4	1	AGLESGAEPGDGDS(0.587)DT(0.327)T(0.086)K;AGLESGAEPGDGDS(1)DTTK	268.6	3.5575999999999994e-116	141413000.0	7417.1	5019.7	10117.5	7514.4	5313.6	4931.5	4398.799999999999	6446.9	7052.2	9244.2	True	False	7091.053164984773	5849.120104688783	7993.975013818203	6855.624218858639	6012.431536404127	5884.442580580573	5385.342874339539	6220.158872862297	6724.3447612731725	7569.985801870522	0.9367326902030112	0.7726725330506541	1.0560092479754604	0.9056323747878938	0.794246078363644	0.7773386548659766	0.7114072622182245	0.8216869932999497	0.8882902738881764	1.0	12.886074878982711	-7.7137217344913696	6.8975177213701455	0.8145108897492801	0.9180848702374556	0.14503173447851458	0.09640754007878785	0.33848866473046835	37.623984003143576	0.02838163031580024	0.03638077663079145	1.9332065837549674e-08	7.7137217344913696	0.10357398048817545	
AGLESGAEPGDGDS(ph)DTTKK	ddPTM_K562_Methotrexat_30min_R1	2	AGLESGAEPGDGDSDTTKK	19	1	O60832	O60832	DKC1	H/ACA ribonucleoprotein complex subunit 4	1	AGLESGAEPGDGDS(0.71)DT(0.145)T(0.145)KK;AGLESGAEPGDGDS(0.712)DT(0.177)T(0.111)KK	120.41	6.0137e-05	87736000.0	3800.3	2312.6400000000003	6819.700000000001	3940.6000000000004	2474.9	1799.6399999999999	2083.19	3485.5	2996.6	4801.700000000001	True	False	3633.2433623507345	2694.7644518412394	5388.338166714704	3595.133716176192	2800.3927298717585	2147.3949600965266	2550.3983864679903	3362.9129893997915	2857.288720063412	3932.0656005756778	0.9240037505525864	0.6853304918022501	1.3703581562641833	0.9143117336724604	0.7121937969350676	0.5461238896375826	0.648615421394444	0.8552535310976096	0.7266635428577508	1.0	11.941071675729118	-7.672259799093496	4.928217100034422	0.7261364252262305	0.9885221052859061	0.24639057703837253	0.1932888819087752	0.28252421496545216	11.687098429735043	0.05881764144430169	0.07598054404186995	2.1268663536521136e-08	7.672259799093496	0.26238568005967566	
AGLESGAEPGDGDSDT(ph)TK	ddPTM_K562_Methotrexat_30min_R1	1	AGLESGAEPGDGDSDTTK	18	0	O60832	O60832	DKC1	H/ACA ribonucleoprotein complex subunit 4	1	AGLESGAEPGDGDS(0.138)DT(0.815)T(0.047)K	182.91	1.8191999999999996e-84	0.0	1589.9	1225.2	2083.7	1627.1	1028.7	1117.3	752.07	1631.6	1520.6	1872.0	True	False	1520.0098996925067	1427.643475160806	1646.3598454453154	1484.4546692357198	1163.9920809806765	1333.2024121023355	920.7408419351956	1574.2157032003156	1449.9076378990944	1532.9626599491153	0.9915505050481539	0.9312969666255242	1.0739725685816537	0.9683567043211571	0.7593088281871874	0.8696900759126054	0.6006283557916267	1.026910664120527	0.9458205837493929	1.0	10.58210684078316	-7.594722316488637	8.4861169574112	0.8555010182626798	0.9969554381549871	0.20506847067778278	0.11963095751144935	0.4125073854523251	43.72310810817113	0.0359297948568125	0.046427600893974706	2.5425978973788266e-08	7.594722316488637	0.14145441989230734	
AGLESGAEPGDGDSDT(ph)TKK	ddPTM_K562_Methotrexat_30min_R1	2	AGLESGAEPGDGDSDTTKK	19	1	O60832	O60832	DKC1	H/ACA ribonucleoprotein complex subunit 4	1	AGLESGAEPGDGDS(0.169)DT(0.416)T(0.416)KK;AGLESGAEPGDGDS(0.217)DT(0.391)T(0.391)KK	88.071	0.0032296	80754000.0	4316.3	2704.8999999999996	7057.8	4363.8	2786.5	2421.7	2193.3	3228.8	3385.3	5491.1	True	False	4126.560620191691	3151.8387495612637	5576.464230543721	3981.2324292365793	3152.973591574469	2889.65925122011	2685.2033568902675	3115.241273898737	3227.918141904383	4496.608580153091	0.9177050985503387	0.7009368712839926	1.2401489102602445	0.8853855874422218	0.7011892486019149	0.6426308182514141	0.5971619074744655	0.6927979650371694	0.7178561541139269	1.0	12.134621590717215	-7.6985246006070485	4.632019089299842	0.698835440171186	0.9468622433963966	0.29297487866952066	0.15902555086642275	0.23714087686578067	10.038020860273319	0.047396572443664214	0.06072962714151472	2.0020522121473568e-08	7.6985246006070485	0.24802680322521053	
AGLESGAEPGDGDSDT(ph)TKKK	ddPTM_K562_Methotrexat_30min_R1	2	AGLESGAEPGDGDSDTTKKK	20	2	O60832	O60832	DKC1	H/ACA ribonucleoprotein complex subunit 4	1	AGLESGAEPGDGDS(0.136)DT(0.432)T(0.432)KKK;AGLESGAEPGDGDS(0.08)DT(0.512)T(0.409)KKK	98.76	0.00026266	19097300.0	6799.5	3614.8	14585.0	6987.5	4494.5	3147.8	2712.49	4437.2	4983.0	9731.9	True	False	6500.602121491419	4212.084258905714	11523.80781581799	6374.916723793615	5085.60552927739	3756.067799888779	3320.8349307123	4281.141160971097	4751.341417631979	7969.358605960894	0.8156995365510494	0.5285349131804877	1.4460144643508013	0.799928455851557	0.6381448973162628	0.47131368854192707	0.41670040148882154	0.5372002155567329	0.5962012318128195	1.0	12.96024790182198	-7.725093915583434	3.7321269946353595	0.5660848963911675	0.9203903411073266	0.22792192602975891	0.25868622925766915	0.3003071544970776	8.775045656087364	0.08009539773812244	0.10124608599215729	1.8832417970088905e-08	7.725093915583434	0.3543054447161591	
AGLGS(ph)PERPPK	ddPTM_K562_Methotrexat_30min_R1	1	AGLGSPERPPK	11	1	Q9H6F5;H0YG79	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	1	AGLGS(1)PERPPK	107.85	0.007381100000000001	12895000.0	2197.2	2003.0	3131.5	2086.7	1574.6	1545.8	1275.1	2054.8	2040.3	2490.3	True	False	2100.613718852995	2333.9617048213295	2474.2409444795367	1903.7622508107547	1781.6874994771774	1844.5039726374216	1561.0736335069444	1982.5315193282743	1945.4468983332388	2039.2825384996172	1.0300748813347373	1.1445013924056446	1.213289918276815	0.9335451144555132	0.8736834969361514	0.9044867191352984	0.7655013976903315	0.9721710856147001	0.9539859541800337	1.0	10.99384595636466	-7.358654269827057	5.856206839789167	0.9031465882125362	1.1298905729777062	0.6404001274446649	0.07351624689790208	0.13674979244841834	6.72440611728934	0.021174654947580238	0.03168386897102359	4.3787054342815487e-08	7.358654269827057	0.22674398476517	
AGLGSPERPPKT(ph)SPGSPR	ddPTM_K562_Methotrexat_30min_R1	3	AGLGSPERPPKTSPGSPR	18	2	Q9H6F5;H0YG79	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	1	AGLGSPERPPKT(0.476)S(0.476)PGS(0.047)PR;AGLGS(0.004)PERPPKT(0.761)S(0.231)PGS(0.004)PR;AGLGSPERPPKT(0.394)S(0.394)PGS(0.212)PR	89.23200000000001	0.0037848	135872000.0	8047.9	5260.4	10413.6	11065.2	5429.6	5017.8	5394.0	6195.799999999999	6535.8	9629.8	True	False	7694.123952283372	6129.591688488331	8227.927670264122	10095.131095831293	6143.6875696439	5987.41883419592	6603.741807808377	5977.890202187132	6231.95208455932	7885.749905330123	0.9756997171673899	0.7772997827822599	1.0433919118716553	1.2801738854294389	0.7790872958691308	0.7592706979140834	0.837427243710175	0.7580623623565041	0.7902802091589323	1.0	12.945032241105606														
AGLGSPERPPKTS(ph)PGSPR	ddPTM_K562_Methotrexat_30min_R1	1	AGLGSPERPPKTSPGSPR	18	2	Q9H6F5;H0YG79	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	1	AGLGSPERPPKT(0.448)S(0.535)PGS(0.017)PR	114.3	0.0018864	76920000.0	1898.5	1789.3	3083.2	3144.6	1653.4	1636.8	1531.6	1814.0	1959.6	2982.3	True	False	1815.0442131997133	2084.951412100251	2436.07845442098	2868.9178003064617	1870.8510806779925	1953.0884347347203	1875.1002878827037	1750.2005918150123	1868.498623718968	2442.1765709221386	0.7432076102975523	0.8537267275940645	0.9975029993433866	1.1747380735960424	0.766058893101075	0.7997326884506373	0.7677988193845815	0.7166560406212382	0.7650956306625462	1.0	11.25395179652903														
AGLQFPVGR	ddPTM_K562_Methotrexat_30min_R1	2	AGLQFPVGR	9	0	P16104;P20671;Q7L7L0;A0A0U1RR32;A0A3B3IS11;A0A494C189;A0A0U1RRH7;Q71UI9-2;Q71UI9;Q9BTM1-2;Q96QV6;C9J0D1;Q93077;Q6FI13;P0C0S8;P04908;Q16777;Q9BTM1;P0C0S5;Q96KK5;Q99878;Q8IUE6;Q71UI9-5	P16104;Q71UI9-5	H2AFX;HIST1H2AD;HIST3H2A;H2AFV;H2AFJ;HIST1H2AA;HIST1H2AC;HIST2H2AA3;HIST1H2AG;HIST1H2AB;HIST2H2AC;H2AFZ;HIST1H2AH;HIST1H2AJ;HIST2H2AB	Histone H2AX;Histone H2A type 1-D;Histone H2A type 3;Histone H2A.V;Histone H2A.J;Histone H2A type 1-A;Histone H2A;Histone H2A type 1-C;Histone H2A type 2-A;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 2-C;Histone H2A.Z;Histone H2A type 1-H;Histone H2A type 1-J;Histone H2A type 2-B	0	;	125.81	0.023724000000000002	139684000.0	6311.7	4973.8	5888.1	6627.2	5195.5	4843.8	5175.200000000001	6657.4	5987.9	6680.1	False	True	6034.245225416189	5795.635909855384	4652.26827564744	6046.203665391778	5878.799316355695	5779.795796779106	6335.870338110847	6423.255468549761	5709.523835969998	5470.2691585075245	1.1030984126314063	1.059479111890105	0.8504642350938243	1.1052844915297344	1.0746819116227238	1.0565834384566246	1.158237401948881	1.1742119596729759	1.0437372770022435	1.0	12.417396105630667														
AGLS(ph)PANCQSDRVNLEK	ddPTM_K562_Methotrexat_30min_R1	1	AGLSPANCQSDRVNLEK	17	1	Q14692	Q14692	BMS1	Ribosome biogenesis protein BMS1 homolog	1	AGLS(1)PANCQSDRVNLEK	113.11	0.0019623	23753000.0	1388.0	1027.5	1924.5	1563.2	1147.4	952.47	950.21	1174.2	1357.5	1806.9	True	False	1326.9851819442727	1197.2769104862286	1520.5737498485928	1426.1566830245702	1298.3032115458632	1136.521347404558	1163.3187807188722	1132.9027204571046	1294.3901212995	1479.6529007810134	0.8968219379314181	0.8091606550794874	1.027655708339422	0.9638454277160502	0.8774376820810966	0.7680999691242869	0.7862105904059197	0.765654377360473	0.8747930819560958	1.0	10.531043070616542	-8.01129934942263	7.8586464569930445	0.8210821488465794	0.9233028849733588	0.17631875719790635	0.08261777867806362	0.2169483983975732	92.41266499461246	0.026525576087097272	0.02813516977023105	9.743178308369713e-09	8.01129934942263	0.1022207361267794	
AGMSS(ph)NQSIS(ph)SPVLDAVPR	ddPTM_K562_Methotrexat_30min_R1	1	AGMSSNQSISSPVLDAVPR	19	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	AGMS(0.377)S(0.453)NQS(0.17)IS(0.561)S(0.438)PVLDAVPR	90.654	0.005545399999999999	27875000.0	1757.9	1306.3	1744.9	1349.2	1324.6	1247.1	1327.1	1533.9	1553.8	1798.5	True	False	1680.6248208500278	1522.1438716965072	1378.6693354693725	1230.917730768136	1498.808117494901	1488.0844250718908	1624.7359572010553	1479.9518675772026	1481.5641771456073	1472.7742221786766	1.1411286234789455	1.0335215328828868	0.9361036571036023	0.835781691607311	1.017676772803446	1.0103954853789916	1.1031806048299662	1.0048735544732093	1.0059682976756124	1.0	10.524320565335135	-7.97748063119153	24.959928371028937	1.0282989924102692	0.9789181729651107	0.04870998728823639	0.077065509613564	681.6095297804961	755475.7526057779	0.025934977351108487	0.029406034858755252	1.0532206579643981e-08	7.97748063119153	-0.049380819445158486	
AGMSSNQS(ph)IS(ph)SPVLDAVPR	ddPTM_K562_Methotrexat_30min_R1	1	AGMSSNQSISSPVLDAVPR	19	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	AGMS(0.109)S(0.235)NQS(0.625)IS(0.683)S(0.347)PVLDAVPR	72.793	0.03154	9587500.0	1135.6	1108.9	1344.3	1260.8	981.13	1067.1	912.87	1225.4	1048.4	1302.0	True	False	1085.6803837290465	1292.126876922802	1062.1498009464597	1150.2676215182819	1110.165792177089	1273.301972571738	1117.6043352046772	1182.3019874366678	999.6601128327044	1066.1951833620442	1.0182754533795204	1.2119046278640324	0.9962057768795877	1.0788527649235211	1.0412406747856353	1.194248475740269	1.0482173926921372	1.1088982635510534	0.9375957877435405	1.0	10.05825585436539	-9.758212541904587	24.992030905491735	0.9687978699581897	1.0888066736907565	0.3268403376254113	0.06795629574420485	83.99099516120296	650557.6941670785	0.04751792812916807	0.016263631216873367	1.744967963889732e-10	9.758212541904587	0.12000880373256673	
AGMSSNQS(ph)ISSPVLDAVPR	ddPTM_K562_Methotrexat_30min_R1	2	AGMSSNQSISSPVLDAVPR	19	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	AGMS(0.076)S(0.076)NQS(0.598)IS(0.072)S(0.179)PVLDAVPR;AGMS(0.001)S(0.001)NQS(0.656)IS(0.332)S(0.01)PVLDAVPR	114.06	0.00029018	924756000.0	6050.8	6195.900000000001	9706.9	6883.8	6703.9	6502.4	6417.5	7262.7	6999.1	8019.4	True	False	5784.814077023345	7219.667162707176	7669.5543426372005	6280.307941788981	7585.580355483968	7758.896772983292	7856.787736672278	7007.266724462455	6673.713368683115	6567.008950425174	0.8808902379596747	1.0993843951194473	1.167891562282802	0.9563422235601445	1.1551043119855726	1.1814962993892297	1.1964027757512952	1.0670408366062571	1.0162485568488577	1.0	12.681020706207144	-6.2617590093685065	8.376168995386097	1.1014662156023198	0.8794764352980999	0.3903338584182765	0.0790639606847768	0.08931719123596939	93.83994143290961	0.020002596323710098	0.11345909099142162	5.473195870700477e-07	6.2617590093685065	-0.2219897803042199	
AGMSSNQSIS(ph)SPVLDAVPR	ddPTM_K562_Methotrexat_30min_R1	2	AGMSSNQSISSPVLDAVPR	19	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	AGMS(0.001)S(0.002)NQS(0.006)IS(0.677)S(0.314)PVLDAVPR;AGMSSNQS(0.127)IS(0.436)S(0.436)PVLDAVPR	287.31	4.3485999999999995e-177	346606000.0	3794.2	3528.8	5774.6	4193.5	4073.1000000000004	3534.4	3586.9	4549.3	3757.5	4209.4	True	False	3627.4115110468015	4111.874220655774	4562.590374578164	3825.8623658287715	4608.784043008064	4217.372778425217	4391.353631892447	4389.298540432216	3582.814645143922	3447.036870080024	1.0523274475339714	1.192872132104672	1.323626797897361	1.1098988812788513	1.3370277768166343	1.2234777106771444	1.2739502933690698	1.2733541026296935	1.039389707792927	1.0	11.751141014756051	-11.479960521297658	6.9391825859178695	0.9999993781687331	1.2121171248625697	0.26248892421901127	0.10095835274405957	0.0	0.0	0.09452650561807721	0.022926045122580802	3.311612236867752e-12	11.479960521297658	0.21211774669383665	
AGMSSNQSISS(ph)PVLDAVPR	ddPTM_K562_Methotrexat_30min_R1	4	AGMSSNQSISSPVLDAVPR	19	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	AGMS(0.128)S(0.106)NQS(0.233)IS(0.138)S(0.394)PVLDAVPR;AGMSSNQS(0.334)IS(0.159)S(0.507)PVLDAVPR;AGMSSNQS(0.027)IS(0.086)S(0.886)PVLDAVPR;AGMSSNQSIS(0.018)S(0.982)PVLDAVPR	297.63	4.1692999999999986e-201	1354093000.0	10811.400000000001	10070.1	16589.7	11136.1	11627.699999999999	10792.8	10153.8	12471.699999999999	10448.2	12617.8	True	False	10336.143801204833	11734.012862566784	13107.748681664429	10159.815402910639	13156.946359501322	12878.355851909153	12431.048121639733	12033.06324197315	9962.46546251303	10332.594151018126	1.000343539108846	1.1356308678213756	1.2685825543987763	0.9832782798218721	1.2733439605972425	1.246381660179712	1.2030907185505622	1.164573297479943	0.9641785322160723	1.0	13.334914889217682	-12.6624003556015	8.297661958791524	0.999767938692925	1.146855634393313	0.11470848868654504	0.11221351694063042	0.00047913156501861	1.9493979958962533e-05	0.10806368648178026	0.026168456174264252	2.1757031694534074e-13	12.6624003556015	0.14708769570038793	
AGMSSNQSISS(ph)PVLDAVPRT(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	2	AGMSSNQSISSPVLDAVPRTPSR	23	1	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	AGMSS(0.001)NQS(0.003)IS(0.483)S(0.519)PVLDAVPRT(0.824)PS(0.169)R;AGMS(0.004)S(0.005)NQS(0.012)IS(0.471)S(0.521)PVLDAVPRT(0.789)PS(0.198)R	72.145	0.0040418	221709000.0	2301.63	2049.41	2602.09	2115.1800000000003	2011.77	2039.87	1725.24	2423.66	2475.94	2519.1499999999996	True	False	2200.4531010939468	2388.04016848621	2055.946868663822	1929.745453428806	2276.3530171619495	2434.046007674924	2112.168987115929	2338.4185040564334	2360.834089819731	2062.9075239374	1.0666755904278338	1.157608928551601	0.9966258035356367	0.9354493262720608	1.1034682799630076	1.1799103834907465	1.023879627470894	1.1335546925502384	1.1444207083571487	1.0	11.01046343417188	-7.933790372474506	24.999999999871587	1.104789268313545	1.0413893388515976	0.12933366051574902	0.07276118048834385	115.88455280249913	43755.11701899644	0.023333780935779466	0.02645802829810487	1.1646880714673992e-08	7.933790372474506	-0.06339992946194739	
AGMSSNQSISSPVLDAVPRT(ph)PS(ph)RER	ddPTM_K562_Methotrexat_30min_R1	2	AGMSSNQSISSPVLDAVPRTPSRER	25	2	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	AGMSSNQSIS(0.002)S(0.007)PVLDAVPRT(0.995)PS(0.996)RER;AGMSSNQS(0.001)IS(0.004)S(0.022)PVLDAVPRT(0.994)PS(0.978)RER	93.40700000000001	0.00019422	148997000.0	3703.1000000000004	3948.5	4884.3	4481.9	3517.3999999999996	3505.8	3707.2	4784.0	4723.200000000001	5297.3	True	False	3540.3161579667403	4600.922511975547	3859.152177908795	4088.9787855986597	3979.9997527378537	4183.24623319464	4538.633969207863	4615.744008402986	4503.619462925821	4337.907638113489	0.8161345176787551	1.0606317367274423	0.8896344735424334	0.9426154558184447	0.9174929677545449	0.9643465426603435	1.0462726152421418	1.0640484753175439	1.038200865172039	1.0	12.082783620416812	-8.649127175429433	3.567704478182038	1.042900979497296	0.9323145170518328	0.4424977758854718	0.058766090408452855	0.2168772985898865	5.328644447631132	0.022645694644145557	0.0168662546598567	2.243224938992624e-09	8.649127175429433	-0.11058646244546333	
AGMSSNQSISSPVLDAVPRT(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	2	AGMSSNQSISSPVLDAVPRTPSR	23	1	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	AGMSSNQSISSPVLDAVPRT(0.5)PS(0.5)R;AGMSSNQSISSPVLDAVPRT(0.889)PS(0.111)R	145.52	4.1725e-17	101437000.0	1670.17	1563.1599999999999	1460.3200000000002	1760.78	1519.6399999999999	1102.12	1482.1	2190.9	1985.62	2188.6000000000004	True	False	1596.751326605092	1821.44562082302	1153.8187884535703	1606.4151511873094	1719.4992961421938	1315.08909194149	1814.4986528277327	2113.8448051860596	1893.3089595983167	1792.2233320323903	0.8909332325198377	1.0163050487449528	0.6437918577620201	0.8963253197723001	0.9594224477550312	0.7337752323814312	1.0124288755743862	1.1794539036543783	1.0564023611116002	1.0	10.807534709970449	-8.961950719345722	7.733956251955114	1.0901001986209524	0.8612694265881853	0.47124019682278495	0.10797849151743055	0.18051514095707863	30.849561986230974	0.045160602692982034	0.030186686885118087	1.0915641923758277e-09	8.961950719345722	-0.22883077203276714	
AGMSSNQSISSPVLDAVPRT(ph)PSRER	ddPTM_K562_Methotrexat_30min_R1	1	AGMSSNQSISSPVLDAVPRTPSRER	25	2	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	AGMSSNQS(0.002)IS(0.001)S(0.001)PVLDAVPRT(0.925)PS(0.072)RER	51.431000000000004	0.021011000000000002	121790000.0	2365.1	2228.9	2007.0	2907.3	2174.4	2563.0	2517.8	3002.4	2885.7	3529.6	True	False	2261.133035890779	2597.1878401778636	1585.7581272777988	2652.4215228744465	2460.3717127290597	3058.2634764327295	3082.480742250634	2896.803890223479	2751.544436857435	2890.355237476708	0.7823028140529734	0.8985704616866469	0.5486377960455034	0.9176801136700488	0.8512350595620815	1.058092595947689	1.0664712428018543	1.0022310934874568	0.9519744843749879	1.0	11.497031101903776	-7.887593217414707	1.8622462999443838	1.016639159529614	0.7653506208438565	0.5611443159030955	0.09719542107207754	0.2502681931548449	1.7794514571022235	0.03476270573513054	0.04152625927024613	1.295408619834846e-08	7.887593217414707	-0.2512885386857575	
AGMT(ph)SLPGGPQS(ph)RGRREAR	ddPTM_K562_Methotrexat_30min_R1	1	AGMTSLPGGPQSRGRREAR	19	3	Q08AM2;A2A2L3;Q9BZ11-2;Q9BZ11	Q08AM2	ADAM33	Disintegrin and metalloproteinase domain-containing protein 33	2	AGMT(0.76)S(0.24)LPGGPQS(1)RGRREAR	63.43600000000001	0.028360000000000003	25986000.0	2078.7	1537.8	2627.2	1680.5	1621.2	1233.1	1673.7	1631.3	1694.4	2297.6	True	False	1987.3228369651008	1791.8953118693155	2075.7866228122725	1533.1731741445694	1834.4162162786745	1471.3791232107685	2049.0698301314205	1573.9262543703578	1615.6277138341618	1881.482375800795	1.0562537616751568	0.95238485085817	1.1032718932213106	0.8148751186106761	0.9749845334043652	0.7820318394343297	1.0890720298452423	0.8365352100098544	0.8586993610006682	1.0	10.877654060135445	-7.256590982854536	24.968953065332872	0.9063007457171652	1.0288116328260086	0.2792370021640973	0.09485533690815352	535.9657623841514	2760183.594216302	0.02456301221949682	0.04090681437178995	5.538714980504989e-08	7.256590982854536	0.12251088710884339	
AGNWPGS(ph)PQVSGPSPAAR	ddPTM_K562_Methotrexat_30min_R1	1	AGNWPGSPQVSGPSPAAR	18	0	H7C3E5;O60244	H7C3E5	MED14	Mediator of RNA polymerase II transcription subunit 14	1	AGNWPGS(0.998)PQVS(0.002)GPSPAAR	66.708	0.034232	12480000.0	823.75	591.78	1094.3	925.48	863.34	792.34	656.79	799.86	699.33	973.89	True	False	787.5389363304001	689.5615864598935	864.621384494318	844.3446053003963	976.8843425623188	945.4484911887273	804.091876520294	771.728470435036	666.8183009417158	797.5090838129502	0.9874983900686347	0.864644178299573	1.0841523965601734	1.0587272577053568	1.22491939263157	1.1855018461588773	1.0082541915082284	0.967673580274904	0.8361262767736864	1.0	9.639357141376069	-9.240473575109498	2.9784774960034515	0.919132897354071	1.0666181670045856	0.25288917868207983	0.10126062278413694	0.4032075931143363	7.17831106516836	0.06737431358563906	0.03172162418338985	5.748127925871715e-10	9.240473575109498	0.14748526965051456	
AGNWPGSPQVS(ph)GPSPAAR	ddPTM_K562_Methotrexat_30min_R1	1	AGNWPGSPQVSGPSPAAR	18	0	H7C3E5;O60244	H7C3E5	MED14	Mediator of RNA polymerase II transcription subunit 14	1	AGNWPGS(0.205)PQVS(0.729)GPS(0.066)PAAR	69.805	0.027346	11127000.0	1977.7	1463.5	2390.4	2397.1	1835.5	1689.5	1813.6	1485.6	1636.2	2003.7	True	False	1890.7626760311155	1705.318499753379	1888.6877067488035	2186.9499647378443	2076.9004225138833	2015.9719638833772	2220.3459663776907	1433.3506059539038	1560.1334191309327	1640.8105137500233	1.1523345689136486	1.0393147078610099	1.1510699687267754	1.3328473619660295	1.2657771297230351	1.2286439823425641	1.3532007186516355	0.8735625435980562	0.9508309497391594	1.0	10.680192925916248	-9.271322704433691	24.982021748722254	0.9341475404148235	1.2148930190324987	0.6585288364899013	0.0910607864693087	465.0966759838626	1175615.0004956608	0.05412743312759289	0.02649616873621951	5.353986793176194e-10	9.271322704433691	0.2807454786176752	
AGPCSLS(ph)QGNLSPNWPR	ddPTM_K562_Methotrexat_30min_R1	1	AGPCSLSQGNLSPNWPR	17	0	O43182-4;O43182	O43182-4	ARHGAP6	Rho GTPase-activating protein 6	1	AGPCSLS(0.94)QGNLS(0.059)PNWPR	117.13	0.0005159	21558000.0	1806.0	1582.2	1990.2	2397.5	1514.6	1385.4	1619.1	2037.4	2174.5	2358.7	True	False	1726.6104024433403	1843.6316571983575	1572.4842176922148	2187.314897358883	1713.7964478014324	1653.1089427428403	1982.2243902526018	1965.7434871906878	2073.4079696248727	1931.5165737296895	0.8939143603149712	0.9544995276112855	0.8141189359073445	1.132433926329328	0.8872802186171007	0.8558606046805728	1.026252850849215	1.0177202276835282	1.0734611329900194	1.0	10.915518341592556	-8.851543566845338	9.542725491510854	1.0314968360786116	0.9274639309289278	0.289171662168182	0.0814946346380543	0.4377238019525813	42.45336028409623	0.033976460555956774	0.022901389725724468	1.407526023380387e-09	8.851543566845338	-0.10403290514968389	
AGPDLPSLPSHALEDEGWAAAAPS(ph)PGSAR	ddPTM_K562_Methotrexat_30min_R1	4	AGPDLPSLPSHALEDEGWAAAAPSPGSAR	29	0	Q9H3Q1-2;Q9H3Q1	Q9H3Q1-2	CDC42EP4	Cdc42 effector protein 4	1	AGPDLPSLPSHALEDEGWAAAAPS(0.748)PGS(0.252)AR;AGPDLPSLPS(0.005)HALEDEGWAAAAPS(0.599)PGS(0.396)AR;AGPDLPSLPSHALEDEGWAAAAPS(0.956)PGS(0.044)AR;AGPDLPSLPS(0.001)HALEDEGWAAAAPS(0.683)PGS(0.316)AR	238.8	5.402399999999999e-83	247292000.0	5389.199999999999	4951.530000000001	5917.870000000001	5978.9	4381.89	4272.700000000001	4632.62	5469.530000000001	5863.23	6365.8	True	False	5152.297220845876	5769.686170880661	4675.789959478558	5454.739119841096	4958.185340457296	5098.338804430014	5671.602961381022	5277.163529740887	5590.64971705847	5212.89193413679	0.9883759889795322	1.1068110069763168	0.8969666009876394	1.046394053197336	0.9511390995827977	0.978025032716174	1.0879954990511789	1.0123293550712633	1.072466068296548	1.0	12.347868237114536	-8.740524336280606	24.98300187867701	1.044225202880588	0.9956566384724863	0.1473907762276756	0.057185314264415685	461.8203073653543	551644.4568637013	0.021010573516879582	0.016257261149206698	1.8175052068713806e-09	8.740524336280606	-0.048568564408101755	
AGPEEPGDS(ph)PPLR	ddPTM_K562_Methotrexat_30min_R1	2	AGPEEPGDSPPLR	13	0	A0A0A0MTG6;Q12770-4;Q12770-2;Q12770	A0A0A0MTG6	SCAP	Sterol regulatory element-binding protein cleavage-activating protein	1	AGPEEPGDS(1)PPLR;AGPEEPGDS(1)PPLR	145.61	1.667e-08	48669000.0	4118.1	3864.0	5560.799999999999	4901.2	3718.5	3789.5	3760.8	4336.9	4052.8999999999996	5037.5	True	False	3937.0732548737133	4502.460323229966	4393.664072828293	4471.519405603905	4207.5479276044025	4521.767243051821	4604.255133631024	4184.368768821677	3864.4815636204353	4125.159935626961	0.954404996730227	1.091463214394295	1.0650893883852588	1.0839626766917834	1.019972072177347	1.0961434983404061	1.1161397874216599	1.0143531000297368	0.9368076932593145	1.0	12.010234339502448	-9.517792023506127	7.96906069232272	0.9703878456607551	1.0632173079854321	0.40043623248034976	0.04564330864677897	0.10876470280632264	63.18624017665216	0.027496844677371634	0.011497694771386778	3.035344412785036e-10	9.517792023506127	0.09282946232467704	
AGPVAGGLLS(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	1	AGPVAGGLLSPAR	13	0	B8ZZ38;A0A0C4DG06;P42704	B8ZZ38	LRPPRC	Leucine-rich PPR motif-containing protein, mitochondrial	1	AGPVAGGLLS(1)PAR	135.94	2.8538e-05	19171000.0	1094.3	941.34	1178.5	1166.6	1026.6	1102.5	804.05	1150.7	1052.4	1399.2	True	False	1046.1958822778233	1096.880434955822	931.1489551553993	1064.3259892633464	1161.6158941720262	1315.542521563435	984.3786801201936	1110.2292287770317	1003.474153705778	1145.7913214747866	0.9130771569566694	0.9573125702715135	0.8126688845547252	0.9289003759370568	1.0138110425525577	1.1481519338706074	0.8591256205826089	0.9689628538537177	0.8757913722144208	1.0	10.162128600234045	-7.53672094085756	12.411067971871065	0.9780372000471931	0.8956745258745351	0.17689352652998058	0.08146761880574724	1.231146490875235	1095.6243224888847	0.024890830042267408	0.03240770106902325	2.9058892554080472e-08	7.53672094085756	-0.08236267417265797	
AGQS(ph)VIGLQMGT(ph)NK	ddPTM_K562_Methotrexat_30min_R1	1	AGQSVIGLQMGTNK	14	0	E9PDU6;Q15417-3;Q15417-2;Q15417	E9PDU6	CNN3	Calponin;Calponin-3	2	AGQS(1)VIGLQMGT(1)NK	84.169	0.018029	4798900.0	546.14	592.51	712.91	617.09	540.96	393.57	470.3	667.47	484.0	610.84	True	False	522.1323395295715	690.4122065520149	563.2799334915876	562.9906777940332	612.1057219085319	469.62183239158395	575.7767467950094	643.9947017744024	461.49894564195813	500.21095683937915	1.0438242753191658	1.3802420700946592	1.126084756421	1.125506489004824	1.2236951500946087	0.9388475521586435	1.1510678423221643	1.2874462123811357	0.9226086300827439	1.0	8.966392849062318	-9.418296076892139	0.20138001415137483	0.9518926314610718	1.2459449366671629	0.1490408926596618	0.13030475409960857	5.489303835105182	1.154388483829703	0.6434858156551447	0.6535225079968182	3.816839720363955e-10	9.418296076892139	0.29405230520609105	
AGQTQPNPGILPIQPALT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	AGQTQPNPGILPIQPALTPR	20	0	E9PG46;Q2M2I8-2;Q2M2I8	E9PG46	AAK1	AP2-associated protein kinase 1	1	AGQTQPNPGILPIQPALT(1)PR	105.95	0.00097618	0.0	434.89	334.61	386.58	296.69	192.97	338.87	223.77	488.32	444.1	453.94	True	False	415.7727563225825	389.8986151024788	305.44214092827673	270.6796483409414	218.34893736448063	404.3518315484816	273.9561187121397	471.145508817589	423.4538879330448	371.7270672314642	1.1184893244905738	1.0488841127614192	0.8216838854462172	0.7281677128246263	0.5873904716992824	1.0877653719434501	0.7369818957562075	1.2674501007595975	1.1391526882527814	1.0	8.538099931347732	-9.263875201849068	24.99995719963307	1.1524760489495411	0.8716146100683518	0.32121981513790276	0.17254498023604936	258.20621859636464	2650049.067128955	0.0933034119324882	0.048100585787988044	5.446591427160902e-10	9.263875201849068	-0.2808614388811893	
AGS(ph)FS(ph)FTKLPNGLVIASLENY(ph)SPVSR	ddPTM_K562_Methotrexat_30min_R1	1	AGSFSFTKLPNGLVIASLENYSPVSR	26	1	H3BP04	H3BP04	UQCRC2		3	AGS(0.837)FS(0.608)FT(0.555)KLPNGLVIAS(0.182)LENY(0.536)S(0.11)PVS(0.173)R	53.06399999999999	0.011878	14241000.0	907.01	966.11	1015.2	1024.7	910.58	887.55	827.13	965.84	694.17	863.18	True	False	867.1389264231085	1125.743256437811	802.12339352886	934.8661419493844	1030.3372305816906	1059.056476202836	1012.6349576367332	931.8708597566764	661.8981882154502	706.8497376147845	1.2267655772911634	1.5926203215927526	1.1347862931032129	1.3225811543822954	1.4576467610478179	1.498276677270262	1.432602862743926	1.3183436452862103	0.936405791772633	1.0	9.465259748744003	-9.70653084315824	4.763735357128263	0.964738721620763	1.3835076258834746	0.6249492417662872	0.12587195197821643	0.1202291509032389	5.453005221910287	0.0970429959902171	0.032172317281497095	1.9654823890369173e-10	9.70653084315824	0.4187689042627116	
AGS(ph)PDVLR	ddPTM_K562_Methotrexat_30min_R1	1	AGSPDVLR	8	0	Q8NDX6	Q8NDX6	ZNF740	Zinc finger protein 740	1	AGS(1)PDVLR	134.05	0.00011515	13878000.0	3844.9	3764.4	4837.1	4153.3	4145.5	4355.4	4199.1	4345.8	3926.4	4346.8	True	False	3675.8827997532667	4386.4031161404955	3821.8588128826304	3789.1866374142446	4690.705912030129	5197.01940899536	5140.855065845042	4192.955750777112	3743.862521009469	3559.552398646802	1.0326811879916948	1.2322906435674408	1.0736908422349807	1.0645121108077353	1.317779705620669	1.4600204820614684	1.444241997336347	1.177944663034348	1.0517790164945273	1.0	11.79748012336741	-6.258772430610348	23.41449412985176	1.2189052587736493	1.0326810469838317	0.08879519517463652	0.15534524748660464	262.27343161791094	2302292.5836383505	0.04205972021503149	0.27778470749740763	5.510963941048262e-07	6.258772430610348	-0.18622421178981763	
AGSNEDPILAPS(ph)GTPPPTIPPDETFGGR	ddPTM_K562_Methotrexat_30min_R1	1	AGSNEDPILAPSGTPPPTIPPDETFGGR	28	0	E7EV54;C9JFV4;Q8IZL8	E7EV54	PELP1	Proline-, glutamic acid- and leucine-rich protein 1	1	AGSNEDPILAPS(0.499)GT(0.499)PPPT(0.002)IPPDETFGGR	79.993	0.00026712	12575000.0	2493.5	2118.6	2960.6	2317.7	2394.0	1907.2	2142.4	2751.4	2557.3	2902.0	True	False	2383.8887256325957	2468.6626399572974	2339.210518992852	2114.510839461392	2708.8529618622943	2275.739407823838	2622.887736197378	2654.6317024916334	2438.4116811780555	2376.4196790450487	1.0031429829728342	1.0388159388367446	0.9843423447548839	0.8897884738570658	1.1398882889872517	0.9576336317574728	1.1037140280084583	1.1170719237430244	1.0260863022973779	1.0	11.2145739252665	-7.768105007278092	24.99983597779095	1.0605800883136531	0.9836733930638517	0.272156490983414	0.062477209595106456	219.94802027305457	824926.548451051	0.019151132824269997	0.022211340866830822	1.705669928290926e-08	7.768105007278092	-0.07690669524980143	
AGSNEDPILAPSGT(ph)PPPTIPPDETFGGR	ddPTM_K562_Methotrexat_30min_R1	3	AGSNEDPILAPSGTPPPTIPPDETFGGR	28	0	E7EV54;C9JFV4;Q8IZL8	E7EV54	PELP1	Proline-, glutamic acid- and leucine-rich protein 1	1	AGSNEDPILAPS(0.218)GT(0.782)PPPTIPPDETFGGR;AGSNEDPILAPS(0.056)GT(0.944)PPPTIPPDETFGGR;AGSNEDPILAPS(0.037)GT(0.963)PPPTIPPDETFGGR	156.69	5.8342e-35	75925000.0	9146.900000000001	8954.3	10978.4	9240.800000000001	8802.2	8632.1	7824.9	9867.699999999999	9814.1	11864.6	True	False	8744.813228188816	10433.845877923934	8674.183868712798	8430.673411267564	9959.843584337621	10300.13115681426	9579.833012962505	9520.647397934401	9357.844633108965	9715.805969675357	0.9000605050659543	1.073904307114582	0.8927909733671469	0.8677276427278493	1.0251175883322439	1.0601417102155681	0.9860049740456688	0.9799132905339939	0.9631568047279198	1.0	13.24611796346025	-7.801444991600687	24.999817298525443	1.0034531724462132	0.9407243574874017	0.2512938536876418	0.05761408910939445	252.9457547018146	158066.26697024607	0.01872195963574761	0.021228997830429443	1.579628673237168e-08	7.801444991600687	-0.06272881495881155	
AGSNEDPILAPSGT(ph)PPPTIPPDETFGGRVPR	ddPTM_K562_Methotrexat_30min_R1	3	AGSNEDPILAPSGTPPPTIPPDETFGGRVPR	31	1	E7EV54;C9JFV4;Q8IZL8	E7EV54	PELP1	Proline-, glutamic acid- and leucine-rich protein 1	1	AGSNEDPILAPS(0.034)GT(0.76)PPPT(0.205)IPPDET(0.001)FGGRVPR;AGSNEDPILAPS(0.347)GT(0.652)PPPT(0.001)IPPDETFGGRVPR;AGSNEDPILAPS(0.251)GT(0.748)PPPT(0.001)IPPDETFGGRVPR	137.85	1.0119999999999999e-27	211971000.0	3614.37	2664.1	4253.66	4196.7	2679.2799999999997	3033.89	3160.08	2983.7200000000003	3383.23	3981.2000000000003	True	False	3455.486622524439	3104.297243042688	3360.8748957032794	3828.781826797091	3031.6522822299103	3620.1463045315986	3868.8083819093595	2878.780876411406	3225.9443757525655	3260.1661013832336	1.0599112177316163	0.9521899027554415	1.0308906942739258	1.174413115077972	0.9299073077729479	1.1104177492660976	1.186690573915203	0.8830166276466674	0.989503072982647	1.0	11.670729754497966	-9.282964405094644	24.922231116741724	0.9521949009190508	1.0588877250677653	0.251240337243972	0.08342850861971336	1171.25816553139	1356104.7487663464	0.04589408488867283	0.022083591828376662	5.212374301297663e-10	9.282964405094644	0.1066928241487145	
AGSRLS(ph)AEER	ddPTM_K562_Methotrexat_30min_R1	1	AGSRLSAEER	10	1	B1AJQ6;Q86Y82	B1AJQ6	STX12	Syntaxin-12	1	AGS(0.06)RLS(0.94)AEER	91.20200000000001	0.032313999999999996	16730000.0	3668.8	3864.3	4589.3	4852.2	3319.9	3779.5	3370.6	4251.8	3888.6	4652.6	True	False	3507.523944897082	4502.809893130837	3626.06864649527	4426.815159526499	3756.5250409718556	4509.834884579595	4126.542850834059	4102.261784056818	3707.8198347589196	3809.9690553842142	0.9206174364960472	1.1818494658814895	0.9517317841127718	1.1619031795732209	0.985972585699395	1.1836933106336749	1.0830909098861226	1.0767178747185724	0.9731889631804389	1.0	11.895563564841305	-9.757570454212425	24.88357923778816	0.9865944605047208	1.072832370386204	0.1185129548247249	0.08829926288546223	163.99243895311156	1054799.0736429358	0.05903989706415705	0.02040272860761783	1.7475497399855365e-10	9.757570454212425	0.08623790988148317	
AGSS(ph)TPGDAPPAVAEVQGR	ddPTM_K562_Methotrexat_30min_R1	1	AGSSTPGDAPPAVAEVQGR	19	0	Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7	Q7Z6Z7-2	HUWE1	E3 ubiquitin-protein ligase HUWE1	1	AGS(0.001)S(0.499)T(0.499)PGDAPPAVAEVQGR	192.24	1.0171e-15	41366000.0	1664.5	1390.8	1905.4	1836.7	1235.1	1346.3	1370.7	1524.7	1649.8	2045.5	True	False	1591.3305730160246	1620.6060604420904	1505.482578831648	1675.679362660714	1397.5372987452452	1606.4534211164184	1678.1143670676572	1471.0754367918123	1573.1011580993845	1675.0401286997414	0.9500253431249454	0.9675028273502285	0.8987740371332397	1.000381623072797	0.8343306376964775	0.9590536928589504	1.001835322220192	0.8782329519076908	0.9391423710669621	1.0	10.709979943087802														
AGSSPCLGSSSAASS(ph)PPPPASR	ddPTM_K562_Methotrexat_30min_R1	2	AGSSPCLGSSSAASSPPPPASR	22	0	A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2	A0A0A0MS59	SRCAP	Helicase SRCAP	1	AGSSPCLGSS(0.001)S(0.001)AAS(0.192)S(0.807)PPPPASR;AGSSPCLGSSSAAS(0.076)S(0.923)PPPPASR	194.77	4.0985e-22	44487000.0	2709.8999999999996	2589.4	3160.9	2684.6	2393.89	2581.4	2411.04	2791.8999999999996	2676.9	2697.0	True	False	2590.7760407426404	3017.254337725588	2497.470286254308	2449.2452861103898	2708.728494934221	3080.219016021635	2951.777094604804	2693.707294536015	2552.451503282971	2208.5471655356646	1.1730680155586668	1.3661715650948203	1.130820443967547	1.1089848223894943	1.2264752762376445	1.3946811116775737	1.3365243634671824	1.2196738818039592	1.1557151882984102	1.0	11.108881927435359	-10.06796242107773	2.235478675048939	1.0010600341108273	1.2483947814045289	0.4063116583296583	0.09108338786163754	0.4075959300242778	4.582647173858181	0.09469148790548804	0.026051312686935245	8.5514070386801e-11	10.06796242107773	0.24733474729370153	
AGSST(ph)PGDAPPAVAEVQGR	ddPTM_K562_Methotrexat_30min_R1	3	AGSSTPGDAPPAVAEVQGR	19	0	Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7	Q7Z6Z7-2	HUWE1	E3 ubiquitin-protein ligase HUWE1	1	AGS(0.009)S(0.038)T(0.953)PGDAPPAVAEVQGR;AGSS(0.003)T(0.997)PGDAPPAVAEVQGR;AGS(0.003)S(0.043)T(0.954)PGDAPPAVAEVQGR	220.97	4.552899999999999e-35	122646000.0	5381.7	4241.7	6031.9	6079.099999999999	4934.7	4603.5	4848.0	4985.2	5396.2	6095.2	True	False	5145.126911865628	4942.568828427675	4765.88662079071	5546.154741411631	5583.699545071785	5493.0612226914045	5935.287409020211	4809.867690361744	5145.331839820525	4991.300216304404	1.0308189627742166	0.9902367347655137	0.9548387021927943	1.1111643261398623	1.118686374911345	1.100527114107055	1.189126510489634	0.9636502478151888	1.0308600198026492	1.0	12.285199966210898	-15.274625918060774	17.671199591127152	1.002477480634507	1.0527184512056855	0.0	0.07335849157849564	0.0	0.0	0.0	0.01799898683151839	5.313419214621816e-16	15.274625918060774	0.0502409705711786	
AGT(ph)DSPVSCASVTEER	ddPTM_K562_Methotrexat_30min_R1	1	AGTDSPVSCASVTEER	16	0	E9PEI0;Q69YH5	E9PEI0	CDCA2	Cell division cycle-associated protein 2	1	AGT(0.508)DS(0.491)PVSCASVTEER	127.32	0.00035438	18945000.0	1510.0	1372.3	1793.7	1639.1	1071.0	1163.5	1147.1	1460.1	1291.5	1768.3	True	False	1443.622208022949	1599.0492498883227	1417.2268823608308	1495.402647866922	1211.8552724120789	1388.3299082440424	1404.366375182979	1408.747455407441	1231.4584468937783	1448.0437348226594	0.9969465516176196	1.104282426997384	0.978718286111985	1.032705443838036	0.8368913474567767	0.9587624150137081	0.9698369886286414	0.9728625051369523	0.8504290424933842	1.0	10.499889461018924	-7.688404227232959	24.999961411735654	0.9333891612703856	1.0300694377548327	0.4014145150625382	0.05780157810124012	42.94277958677033	14698.157554596959	0.016624039635830437	0.021461537795998777	2.0492539117398957e-08	7.688404227232959	0.0966802764844471	
AGTDS(ph)PVSCASVTEER	ddPTM_K562_Methotrexat_30min_R1	1	AGTDSPVSCASVTEER	16	0	E9PEI0;Q69YH5	E9PEI0	CDCA2	Cell division cycle-associated protein 2	1	AGT(0.027)DS(0.956)PVS(0.016)CAS(0.001)VTEER	124.16	0.00026209	21995000.0	1782.1	1385.2	2487.2	1952.6	1684.9	1355.5	1445.4	1533.9	1788.2	2104.1	True	False	1703.7610178262887	1614.0807556258146	1965.1707095990737	1781.4185896070721	1906.4938828077593	1617.4311909108717	1769.5677436051587	1479.9518675772026	1705.0669723077465	1723.0271008541304	0.9888184677894555	0.9367703820942169	1.140533836423646	1.0338888974665554	1.106479336200041	0.9387148873683338	1.0270109754675114	0.8589254729908591	0.9895764097166663	1.0	10.75072967801855	-8.28368436134818	24.939687367031684	0.9580387251879854	1.0405925545537753	0.2510844457795923	0.06748574936055711	1122.909818879611	1258931.7599498488	0.02403174649756028	0.0212075216154702	5.203740591166102e-09	8.28368436134818	0.08255382936578992	
AGTEDEEEEEEGRRET(ph)PEDR	ddPTM_K562_Methotrexat_30min_R1	2	AGTEDEEEEEEGRRETPEDR	20	2	F8WBH7;O95456-2;O95456	F8WBH7	PSMG1	Proteasome assembly chaperone 1	1	AGT(0.093)EDEEEEEEGRRET(0.907)PEDR;AGT(0.002)EDEEEEEEGRRET(0.998)PEDR	106.38	0.00017179	19007000.0	2268.13	1872.7	2480.02	2207.86	1808.1399999999999	1700.5800000000002	1715.1599999999999	1750.25	1919.72	2013.01	True	False	2168.425720982178	2182.1318445426386	1959.4976934785689	2014.3003417237885	2045.9421029497437	2029.1930170706087	2099.8282905229166	1688.6927154488567	1830.4726362144206	1648.4343825342773	1.3154455791248871	1.323760210089687	1.1887022706151442	1.2219475419015675	1.2411425802732554	1.2309819781549078	1.2738318933233321	1.0244221628359187	1.1104309978054938	1.0	10.68688074499371	-9.260424314270088	24.998793110983726	1.0505699252375484	1.2536142631807636	0.8110998862468732	0.04675554038000778	40.37209356230658	994307.7853595397	0.02444390433722003	0.013082143522156708	5.490042237922751e-10	9.260424314270088	0.2030443379432152	
AGTFIAPPVYSNITPY(ph)QSHLRSPVR	ddPTM_K562_Methotrexat_30min_R1	2	AGTFIAPPVYSNITPYQSHLRSPVR	25	1	A0A0A0MSU2;A0A1C7CYX1;Q6PJG2	A0A0A0MSU2	ELMSAN1	ELM2 and SANT domain-containing protein 1	1	AGTFIAPPVY(0.006)S(0.006)NIT(0.001)PY(0.581)QS(0.328)HLRS(0.079)PVR;AGTFIAPPVY(0.001)S(0.001)NIT(0.049)PY(0.794)QS(0.121)HLRS(0.034)PVR	92.03399999999999	0.00019314	69503000.0	5235.9	3333.5	4108.5	4533.9	4042.5	3435.5	4166.7	8204.5	8102.599999999999	9627.0	True	False	5005.73610528964	3884.304215188168	3246.1819959745067	4136.420026333864	4574.15960665343	4099.3617531348555	5101.188541081787	7915.943084645129	7725.911894542417	7883.457012462681	0.634967134009388	0.49271584903014093	0.41177138288985804	0.5246962112934392	0.5802225596489334	0.5199954470043178	0.6470750754418394	1.004120790172521	0.9800157319725082	1.0	12.94461269620272	-9.15596854574772	2.8726047756340876	1.0028272569244634	0.5238868042971093	0.9331854035025815	0.05587538745289436	0.06662191743423106	1.052954182466994	0.03358276622170996	0.016985117606536565	6.982829761531396e-10	9.15596854574772	-0.4789404526273541	
AGTLSITEFADMLSGNAGGFRS(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	AGTLSITEFADMLSGNAGGFRSR	23	1	Q15149-4;H0YDN1;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149	Q15149-4	PLEC	Plectin	1	AGTLSITEFADMLS(0.006)GNAGGFRS(0.994)R;AGTLSITEFADMLS(0.102)GNAGGFRS(0.898)R	70.50399999999999	0.0034219000000000003	22417000.0	2964.3	2421.96	2819.7	3479.6	3036.8999999999996	2768.3	2823.6	3601.1	3619.7	4384.8	True	False	2833.9929213525998	2822.1477237189556	2227.8835034804238	3174.548870427517	3436.305580567916	3303.2347958676255	3456.8641765902344	3474.4472718770876	3451.420937066521	3590.6702304192745	0.7892657190693005	0.7859668370017426	0.620464526262073	0.8841103935230589	0.9570095163449934	0.9199493642951205	0.9627350758375224	0.9676319597501395	0.9612191361453727	1.0	11.810037445661038	-7.4725180177120984	5.368403919626307	0.9553132717474225	0.7374141636098136	0.8240804681162222	0.0473162183340238	0.08316996510218473	5.459893823065684	0.013668151322232407	0.02002536305581462	3.368852389874381e-08	7.4725180177120984	-0.21789910813760893	
AGVLAHLEEER	ddPTM_K562_Methotrexat_30min_R1	1	AGVLAHLEEER	11	0	P35579;P35579-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4	P35579;P35580	MYH9;MYH10	Myosin-9;Myosin-10	0		152.69	1.189e-32	0.0	2709.5	2314.4	2700.9	2422.4	2449.2	2626.5	2103.3	2943.8	3266.7	2678.5	False	True	2590.3936242636955	2696.8152619263524	2134.0179999823663	2210.0319530186275	2771.3127294039796	3134.033952731393	2575.0185658812306	2840.2648854382774	3114.8318300177357	2193.39769480433	1.1809958724766423	1.2295149522197941	0.9729279852155307	1.0075837857647523	1.2634793662675041	1.428848931570969	1.173986173132613	1.2949155970056099	1.4200944212698305	1.0	11.098951701919395	-7.852613807514674	7.466948003424736	1.2835561352911937	1.0987252264428164	0.2612425353848483	0.13433408134074304	0.29359887511821764	20.696132276206793	0.04149294599652355	0.04720196439018269	1.4040616989088892e-08	7.852613807514674	-0.18483090884837727	
AGVLT(ph)PPDLGPHPPPPAPR	ddPTM_K562_Methotrexat_30min_R1	1	AGVLTPPDLGPHPPPPAPR	19	0	I3L2J0	I3L2J0	CIC		1	AGVLT(1)PPDLGPHPPPPAPR	136.46	1.9441e-08	11466000.0	1619.6	1772.6	2263.6	1797.7	1747.9	1554.1	1522.3	1599.4	1738.6	1872.3	True	False	1548.4043232542829	2065.492020951718	1788.5012939242783	1640.0984321093072	1977.779487067294	1854.4078301693723	1863.714526145104	1543.1481954514497	1657.7728654816278	1533.2083270420565	1.0099112403345365	1.3471698428201015	1.1665089879695254	1.06971662179364	1.2899613524033795	1.209495016079772	1.2155650952800894	1.0064830514119172	1.0812443659759452	1.0	10.582338023387756	-9.260686753673134	24.999971103221554	1.0328977884562456	1.1926090859012481	0.37256598560870147	0.09351913117399589	70.24914431382578	2333568.0948981987	0.04529807581192773	0.02416807664486934	5.486725667658912e-10	9.260686753673134	0.15971129744500256	
AGVVNGTGAPGQS(ph)PGAGR	ddPTM_K562_Methotrexat_30min_R1	4	AGVVNGTGAPGQSPGAGR	18	0	H0Y4T7;E7ESY4;Q13330-3;Q13330;Q13330-2	H0Y4T7	MTA1	Metastasis-associated protein MTA1	1	AGVVNGTGAPGQS(1)PGAGR;AGVVNGTGAPGQS(1)PGAGR;AGVVNGTGAPGQS(1)PGAGR;AGVVNGT(0.007)GAPGQS(0.993)PGAGR	164.58	3.3825e-12	55613500.0	7824.6	6362.13	8452.2	7354.92	7105.240000000001	6756.18	6935.0999999999985	7617.5999999999985	8567.699999999999	9609.4	True	False	7480.6399529115015	7413.36384478029	6678.198726147188	6710.125582849972	8039.7036001430415	8061.716166291562	8490.472712519811	7349.684690303213	8169.389497059103	7869.044543010161	0.9506414548836596	0.9420919915068166	0.8486670382466235	0.8527243105785158	1.0216873924400989	1.0244847544359812	1.0789712354674172	0.9339996298320258	1.0381679062060627	1.0	12.941972759436513	-7.773704344203077	24.999777524256896	1.0164694431153452	0.8980809598473851	0.6157821418782764	0.0455410018821303	156.65424654023298	319308.5089771	0.014769446504879914	0.01686737254437312	1.6838199695248526e-08	7.773704344203077	-0.11838848326796003	
AGY(ph)KAAIVHNVDS(ph)DDLISMGSNDIEVLK	ddPTM_K562_Methotrexat_30min_R1	1	AGYKAAIVHNVDSDDLISMGSNDIEVLK	28	1	C9J8T4;C9JYN7;O43567	C9J8T4	RNF13	E3 ubiquitin-protein ligase RNF13	2	AGY(0.977)KAAIVHNVDS(0.712)DDLIS(0.24)MGS(0.071)NDIEVLK	40.681999999999995	0.03336	0.0	581.51	643.69	1086.0	932.99	626.44	732.81	654.67	606.96	595.4	638.01	True	False	555.9475166804136	750.0488316407598	858.0634410681066	851.1962152604236	708.8278401959124	874.4151612035384	801.4964125543029	585.6128727717969	567.7199839570702	522.4602065566959	1.064095427179838	1.4356094918386222	1.6423517624877562	1.6292077455434957	1.3567116333461702	1.6736493042530876	1.5340812611100303	1.120875552669001	1.0866281811176808	1.0	9.029177347562346	-9.314612450656474	5.004732921137345	1.067090170003212	1.4903858616713928	0.5486415776059061	0.1693433861153271	0.16985510851876476	9.427215230266054	0.09906703192694706	0.04669349678777531	4.846046190585323e-10	9.314612450656474	0.4232956916681807	
AGYST(ph)DESSSSSLHATR	ddPTM_K562_Methotrexat_30min_R1	2	AGYSTDESSSSSLHATR	17	0	P51116	P51116	FXR2	Fragile X mental retardation syndrome-related protein 2	1	AGYS(0.314)T(0.686)DESSSSSLHATR;AGY(0.009)S(0.289)T(0.701)DESSSSSLHATR	167.9	8.4549e-08	15341200.0	5147.799999999999	4124.1	5487.1	4648.0	4006.3	4051.8999999999996	3910.7999999999997	4913.1	5303.299999999999	5248.299999999999	True	False	4921.508875801676	4805.537427285893	4335.432695658202	4240.517056485545	4533.198672142397	4834.872329363157	4787.896451979418	4740.303488228411	5056.75074054338	4297.782012933196	1.1451276172201188	1.1181435942597187	1.0087604914841435	0.9866756954458544	1.0547763145037996	1.1249691852247765	1.11403892462934	1.1029650815149645	1.176595445121749	1.0	12.06937659459491	-8.254011055941522	23.566154163665654	1.110794369487026	1.0585572687619673	0.09808076341835925	0.05965220523012284	542.8891274053453	1722301.8843317793	0.02073076438040714	0.02029297762872817	5.571715646977217e-09	8.254011055941522	-0.052237100725058605	
AHEVGAQGGPPVAQVEQDLPIS(ph)RENLTDLVVDTDTLGESTQPQR	ddPTM_K562_Methotrexat_30min_R1	1	AHEVGAQGGPPVAQVEQDLPISRENLTDLVVDTDTLGESTQPQR	44	1	Q14676;Q14676-3;Q14676-2;Q14676-4	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	1	AHEVGAQGGPPVAQVEQDLPIS(0.813)RENLT(0.171)DLVVDT(0.015)DT(0.001)LGESTQPQR	88.149	3.5628e-15	12539000.0	584.28	556.63	703.72	704.17	455.76	408.61	581.51	491.22	563.87	618.61	True	False	558.595750797118	648.6036464077371	556.0187889028069	642.4365093944548	515.7004285289717	487.56809953381844	711.9284202185111	473.94351417385343	537.6558067750635	506.57373454653936	1.102693868044987	1.2803736202160898	1.0976068259846288	1.26819940629084	1.0180165163726898	0.9624819967625565	1.4053796548606994	0.9355864346147063	1.0613574492888924	1.0	8.984628466150445	-9.14402002262092	0.32491462263988663	0.9818440908690697	1.2008562803148657	0.1314762175868841	0.13713188503536822	3.0113645168680594	0.9909632948668909	0.20842794654771607	0.23091856728747603	7.177611989980502e-10	9.14402002262092	0.21901218944579603	
AHGLSLIPSTGLCS(ph)PDLVNR	ddPTM_K562_Methotrexat_30min_R1	2	AHGLSLIPSTGLCSPDLVNR	20	0	O75030-11;O75030-10;O75030-9;O75030-12;O75030-4;O75030-3;O75030-8;O75030-7;O75030-6;O75030-2;O75030-5;O75030	O75030-11	MITF	Microphthalmia-associated transcription factor	1	AHGLSLIPST(0.002)GLCS(0.998)PDLVNR;AHGLSLIPST(0.001)GLCS(0.999)PDLVNR	162.11	1.9678e-13	62264000.0	3689.8999999999996	2818.2	2999.8999999999996	3435.0	3026.7	2764.3	2642.4	3311.1000000000004	3406.4	4258.2	True	False	3527.696414161506	3283.8596487905493	2370.261986059128	3133.858883181552	3424.7641017830397	3298.461852478731	3235.0254640253734	3194.646736250656	3248.037207509846	3486.998717198356	1.0116712681201812	0.9417438648870454	0.6797427181055934	0.8987267095123751	0.9821523836219478	0.9459314786123277	0.9277392182766755	0.9161594240038632	0.9314707205053104	1.0	11.767770118036266	-7.530199730691286	24.354218835871663	0.9445940608159046	0.8683072540224497	0.1385873322363116	0.08200599448106723	256.2232294064999	852353.8180986792	0.025331325051301295	0.03277947222112251	2.9498522867054554e-08	7.530199730691286	-0.0762868067934549	
AHLDHIPDYTPPLLTTIS(ph)PEQESDER	ddPTM_K562_Methotrexat_30min_R1	3	AHLDHIPDYTPPLLTTISPEQESDER	26	0	F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8;K7EM61	F5H0Q6	CLASRP	CLK4-associating serine/arginine rich protein	1	AHLDHIPDYTPPLLT(0.002)T(0.002)IS(0.914)PEQES(0.083)DER;AHLDHIPDYTPPLLT(0.001)T(0.002)IS(0.971)PEQES(0.027)DER;AHLDHIPDYTPPLLT(0.003)T(0.005)IS(0.852)PEQES(0.14)DER	138.78	3.3432e-17	115717000.0	3425.42	3461.3	4016.19	3977.8	3087.05	3451.0	3217.86	3943.4800000000005	3717.71	4462.0	True	False	3274.842638282096	4033.2209929595933	3173.246603483717	3629.072449932916	3493.0511845935634	4117.856908766815	3939.5470177371617	3804.7855732142593	3544.8744735590185	3653.888562335979	0.8962623195570163	1.1038160918572466	0.8684574116992279	0.9932083006967246	0.9559818601474835	1.1269793368121261	1.0781793014559147	1.0412976499704223	0.9701649114588031	1.0	11.835216919443896	-8.219395957283403	24.92923241582948	1.0480838399960481	0.9677032993419113	0.23973214286191125	0.0705888516336273	698.3277760485952	414066.86595568474	0.02266216907387568	0.022661903990167622	6.033982450457853e-09	8.219395957283403	-0.0803805406541368	
AHQGTGAGIS(ph)PVILNSGEGKEVDILR	ddPTM_K562_Methotrexat_30min_R1	1	AHQGTGAGISPVILNSGEGKEVDILR	26	1	F5GZK9;Q8IZD4-2;Q8IZD4	F5GZK9	DCP1B	mRNA-decapping enzyme 1B	1	AHQGTGAGIS(1)PVILNSGEGKEVDILR	89.20100000000001	6.913399999999999e-05	8104200.0	2170.4	1312.7	1941.7	2000.3	1339.1	1235.8	1502.9	1691.1	1637.6	2722.6	True	False	2074.9918147635817	1529.601362915107	1534.1637049004992	1824.9368046661011	1515.2151216498726	1474.6008599982697	1839.963582305378	1631.6230544753948	1561.4683334365102	2229.510757466592	0.9306937891259196	0.6860704115432048	0.6881167537598157	0.8185368913580794	0.6796177666223157	0.6614010966575772	0.8252768353520485	0.7318300882878085	0.7003636686690927	1.0	11.122511445384218	-12.574949117860223	3.6394521543271154	1.00729875334272	0.7428403455132019	0.46345614462192475	0.08160091584631107	132625633.27607512	57939.54286536357	8111623.126360021	0.019058419393008477	2.6610368098236007e-13	12.574949117860223	-0.2644584078295181	
AHQITDES(ph)LESTRR	ddPTM_K562_Methotrexat_30min_R1	1	AHQITDESLESTRR	14	1	H3BM38;O00161;H3BNG6;H3BU94;H3BNE1;H3BR18;H3BPJ0;O00161-2	H3BM38	SNAP23	Synaptosomal-associated protein;Synaptosomal-associated protein 23	1	AHQITDES(0.879)LES(0.091)T(0.029)RR	112.57	0.0011324999999999998	42852000.0	1419.8	1414.4	1478.6	1613.1	1364.4	1254.9	1311.2	1301.7	1469.0	1797.1	True	False	1357.3872920205179	1648.1055593106794	1168.2620662645502	1471.6820274993186	1543.8425151064787	1497.3916646802304	1605.269977456126	1255.9184731894168	1400.7065106364396	1471.6277757449545	0.9223713457931936	1.1199201227881077	0.7938570374381272	1.0000368651334652	1.0490713348522986	1.0175070689476717	1.0908125029398281	0.8534212889218245	0.9518076063272088	1.0	10.523197096006337	-9.2707787740156	24.98115359468267	0.9269608493474892	0.9985046652425792	0.08975648993095453	0.09231466003176485	1599.3528469484029	4277946.260327082	0.04880488355532819	0.023957702945652	5.360696573848711e-10	9.2707787740156	0.07154381589508996	
AHQITDESLES(ph)TRR	ddPTM_K562_Methotrexat_30min_R1	1	AHQITDESLESTRR	14	1	H3BM38;O00161;H3BNG6;H3BU94;H3BNE1;H3BR18;H3BPJ0;O00161-2	H3BM38	SNAP23	Synaptosomal-associated protein;Synaptosomal-associated protein 23	1	AHQITDES(0.254)LES(0.373)T(0.373)RR	73.279	0.030719999999999997	29615000.0	1430.3	1093.9	1306.7	1261.4	990.0	1034.2	1243.8	1362.4	1582.1	1417.3	True	False	1367.4257245928634	1274.6483818792076	1032.4415271120583	1150.8150204498415	1120.2023526498203	1234.0445131980998	1522.753811744913	1314.4836197843297	1508.5485163226072	1160.6132360822016	1.1781924262804238	1.0982542179011727	0.8895655288209505	0.9915577254095126	0.9651814384188885	1.0632693776298596	1.312025198751966	1.1325767955408963	1.2997857248422442	1.0	10.180671571812008	-8.581668385020379	8.19563789150593	1.1966446602898222	1.0187853126088064	0.32942866965375817	0.10898565751312422	0.2863530302872778	35.53846295359092	0.04132696051948286	0.031979135517026705	2.6201829421415435e-09	8.581668385020379	-0.17785934768101574	
AHS(ph)GAAPWQPLAAPSGASAQAAEQLQR	ddPTM_K562_Methotrexat_30min_R1	1	AHSGAAPWQPLAAPSGASAQAAEQLQR	27	0	H7C3C1;H7C2I6;H7C224;D3YTB5;P51617-4;P51617-2;P51617-3;P51617	H7C3C1	IRAK1	Interleukin-1 receptor-associated kinase 1	1	AHS(1)GAAPWQPLAAPSGASAQAAEQLQR	64.14399999999999	0.00078518	5114400.0	661.14	633.43	570.47	648.12	636.86	453.98	495.6	881.45	754.75	668.72	True	False	632.0770772266832	738.0935410309406	450.7361429338145	591.3003258712156	720.6182528369336	541.7052099223293	606.7509158231053	850.4489038893842	719.6618372381567	547.6083279707116	1.1542503007012146	1.3478493721344884	0.8230995036253754	1.0797869493008165	1.315937351623833	0.9892201821139982	1.108001622385036	1.5530240510419517	1.3141908193855067	1.0	9.09700057689407	-9.13670080160403	18.73934798959197	1.3264506733409807	1.1157410737118179	0.14004488885000987	0.188812101975123	4.276876267374904	623.8938902786139	0.0873047927088615	0.050405390590943504	7.299602283955744e-10	9.13670080160403	-0.2107095996291628	
AHS(ph)PAEGASVESSSPGPK	ddPTM_K562_Methotrexat_30min_R1	2	AHSPAEGASVESSSPGPK	18	0	C9J4C4;Q8NFG4-3;Q8NFG4-2;Q8NFG4	C9J4C4	FLCN	Folliculin	1	AHS(1)PAEGASVESSSPGPK;AHS(1)PAEGASVESSSPGPK	272.24	1.4817999999999998e-134	21281700.0	8241.6	5986.299999999999	11848.2	7950.0	5957.9	5731.1	5513.9	7240.4	7719.799999999999	10062.3	True	False	7879.309132213195	6975.434325298018	9361.424735233093	7253.035843171273	6741.468279648855	6838.553964020135	6750.532434941529	6985.751028102215	7360.908182989234	8239.919964319435	0.9562361244201691	0.8465415144204188	1.136106269935874	0.8802313462483161	0.8181473010467107	0.8299296587384943	0.8192473305775707	0.847793553620905	0.8933227767822376	1.0	13.008414609007447	-7.499860811158772	24.991867473811777	0.8554850325682885	0.9732942452429967	0.2622157308321209	0.08282558394684454	938.4547022764456	1018933.6872915699	0.022573142844501178	0.0332158212354688	3.163291314088455e-08	7.499860811158772	0.11780921267470823	
AHSEPLALCGETAPRDS(ph)PPASEAPASEPGYVNYTK	ddPTM_K562_Methotrexat_30min_R1	1	AHSEPLALCGETAPRDSPPASEAPASEPGYVNYTK	35	1	K7ELE9;Q66K64	K7ELE9	DCAF15	DDB1- and CUL4-associated factor 15	1	AHS(0.003)EPLALCGET(0.129)APRDS(0.3)PPAS(0.3)EAPAS(0.256)EPGY(0.009)VNY(0.001)T(0.001)K	43.831	0.016478	34731000.0	2384.5	1633.2	3134.8	2337.8	1759.2	1748.5	1693.7	2402.5	2346.7	2934.9	True	False	2279.6802351196816	1903.058540346578	2476.8483195767053	2132.848703668655	1990.565635132892	2086.3728788695375	2073.5553392445404	2318.0027132500377	2237.6024292107077	2403.36117023753	0.9485383484390634	0.791832107430817	1.0305768230964272	0.8874441053975506	0.8282424047552368	0.8681062608094546	0.8627730883409446	0.9644837163699969	0.9310304489065037	1.0	11.23083775350317	-9.271915472292427	23.523931923463802	0.9608178330163932	0.8868746585365479	0.2348457342556971	0.06347675514250331	515.5738995113845	1157701.454371931	0.033784748972395834	0.016542282563338114	5.346684129811081e-10	9.271915472292427	-0.07394317447984533	
AHSEPLALCGETAPRDSPPASEAPAS(ph)EPGYVNYTK	ddPTM_K562_Methotrexat_30min_R1	1	AHSEPLALCGETAPRDSPPASEAPASEPGYVNYTK	35	1	K7ELE9;Q66K64	K7ELE9	DCAF15	DDB1- and CUL4-associated factor 15	1	AHS(0.008)EPLALCGET(0.1)APRDS(0.1)PPAS(0.1)EAPAS(0.505)EPGY(0.135)VNY(0.033)T(0.017)K	42.733000000000004	0.019518999999999998	28170000.0	1922.9	1446.9	2561.8	2190.0	1724.9	1535.9	1519.3	1775.6	2032.2	2778.2	True	False	1838.3716184154484	1685.9756319051337	2024.1131890683937	1998.0061001943502	1951.7545839249235	1832.690937749914	1860.0416997781367	1713.1511415803384	1937.7234655652637	2275.041058691575	0.8080608529644452	0.7410748150957656	0.8897040259275605	0.8782285895725532	0.8578986196615808	0.80556389553863	0.8175859915459665	0.7530198784920429	0.8517312064159801	1.0	11.151676867176144	-10.02830384577219	23.780412296536156	1.0000000018769897	0.8202567806879768	0.5851498432139344	0.04556632295070791	1307.296889206427	1098367.1952061008	0.04703115683724785	0.012143392498373897	9.3690628912683e-11	10.02830384577219	-0.17974322118901287	
AHSLMELSPSAPPGGS(ph)PHLDSSR	ddPTM_K562_Methotrexat_30min_R1	5	AHSLMELSPSAPPGGSPHLDSSR	23	0	E9PNJ4;Q13586;G0XQ39;H0YDB2	E9PNJ4	STIM1	Stromal interaction molecule 1	1	AHSLMELSPS(0.005)APPGGS(0.959)PHLDS(0.021)S(0.014)R;AHSLMELSPSAPPGGS(0.556)PHLDS(0.262)S(0.182)R;AHSLMELSPS(0.006)APPGGS(0.966)PHLDS(0.017)S(0.011)R;AHSLMELSPS(0.005)APPGGS(0.779)PHLDS(0.128)S(0.088)R;AHS(0.004)LMELSPS(0.007)APPGGS(0.767)PHLDS(0.135)S(0.086)R	135.63	8.546799999999999e-10	160343000.0	5358.71	4076.1699999999996	7602.200000000001	5908.650000000001	5193.549999999999	4430.839999999999	4405.41	6170.39	5397.68	8026.389999999999	True	False	5123.147524738179	4749.6878094565955	6006.602110209906	5390.647828270936	5876.592857176232	5287.037121309868	5393.435335101424	5953.3738862896535	5146.743034943565	6572.732993690692	0.7794546849318235	0.7226351373189697	0.9138667455342813	0.8201531742496668	0.894086655097248	0.8043894566210142	0.8205772758879296	0.9057684059286184	0.783044593456639	1.0	12.682277663823283	-15.999999999999998	0.17583964468143867	1.659921264883071	0.7938085315578097	0.44447751475872166	0.0581346846560453	127.69801076095204	1.2190966018922746	29.58021686337958	0.19301489550135897	1.000000000000004e-16	15.999999999999998	-0.8661127333252613	
AHT(ph)PTPGIYMGR	ddPTM_K562_Methotrexat_30min_R1	1	AHTPTPGIYMGR	12	0	Q13595;Q13595-4;Q13595-3;Q13595-2	Q13595	TRA2A	Transformer-2 protein homolog alpha	1	AHT(1)PTPGIYMGR	96.37100000000001	0.023525	19739000.0	1508.6	1328.4	2037.5	1530.1	1374.6	1252.2	1103.1	1561.6	1251.9	1533.0	True	False	1442.2837503466355	1547.8955210607364	1609.8565940849605	1395.9585086335048	1555.3839938913568	1494.169927892728	1350.4982551341154	1506.6776428766932	1193.699442250346	1255.3588449262784	1.1489015719894293	1.2330303222196497	1.282387582316752	1.1119995802598446	1.2389955271974027	1.190233321676619	1.0757866251489423	1.2001967795631963	0.9508830459711675	1.0	10.293884102858533	-9.519149337167955	0.9428956040848013	0.9803857830453558	1.2049249049665158	0.5689368781671351	0.06731608869264537	0.3845461285626968	0.647052401028464	0.059790138034317354	0.02251892204108407	3.02587276793003e-10	9.519149337167955	0.22453912192116	
AHT(ph)PTPGIYMGRPTHSGGGGGGGGGGGGGGGGR	ddPTM_K562_Methotrexat_30min_R1	3	AHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR	33	1	Q13595;Q13595-4;Q13595-3	Q13595	TRA2A	Transformer-2 protein homolog alpha	1	AHT(0.339)PT(0.339)PGIY(0.305)MGRPT(0.016)HSGGGGGGGGGGGGGGGGR;AHT(0.502)PT(0.446)PGIY(0.035)MGRPT(0.015)HS(0.002)GGGGGGGGGGGGGGGGR;AHT(0.714)PT(0.279)PGIY(0.006)MGRPT(0.001)HSGGGGGGGGGGGGGGGGR	65.558	3.736e-05	145684000.0	4949.58	4636.07	6599.879999999999	5960.3	4818.41	3977.91	4496.42	4886.04	4967.4	6762.64	True	False	4732.002389659751	5402.101767783834	5214.65538069666	5437.769752962733	5452.1153717489115	4746.584809027123	5504.8566443206755	4714.195203766163	4736.466658226987	5537.8603646785705	0.8544820703391656	0.9754853701692031	0.9416372095541868	0.9819261221618673	0.98451658451402	0.8571152929932399	0.9940403480433709	0.8512665349661241	0.8552882063327182	1.0	12.435112961746219	-8.247455364736364	24.911702430508537	0.9074023732406269	0.9507328177579512	0.07859419620895403	0.06045689488284779	1792.3286957389134	3192928.3042227705	0.019540603607132542	0.019456815955687993	5.656458892023806e-09	8.247455364736364	0.04333044451732426	
AHTPT(ph)PGIYMGRPTHSGGGGGGGGGGGGGGGGR	ddPTM_K562_Methotrexat_30min_R1	5	AHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR	33	1	Q13595;Q13595-4;Q13595-3	Q13595	TRA2A	Transformer-2 protein homolog alpha	1	AHT(0.199)PT(0.751)PGIY(0.048)MGRPT(0.001)HSGGGGGGGGGGGGGGGGR;AHT(0.076)PT(0.871)PGIY(0.053)MGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.072)PT(0.836)PGIY(0.091)MGRPT(0.001)HSGGGGGGGGGGGGGGGGR;AHT(0.091)PT(0.884)PGIY(0.022)MGRPT(0.002)HSGGGGGGGGGGGGGGGGR;AHT(0.08)PT(0.904)PGIY(0.008)MGRPT(0.006)HS(0.003)GGGGGGGGGGGGGGGGR	90.454	6.890000000000001e-07	429066000.0	6476.58	5560.679999999999	8775.7	8037.1	6251.02	5476.26	5203.88	6950.080000000001	6780.699999999999	7296.3	True	False	6191.877298037925	6479.487854601037	6933.800497036265	7332.499921402747	7073.1386974354355	6534.469740713807	6370.982558179063	6705.641747057158	6465.46673701327	5974.86936740744	1.0363201130077002	1.084456823432201	1.1604940745415686	1.2272234705918594	1.1838147853104521	1.0936590139290667	1.0662965441441108	1.1223076748147898	1.0821101415676149	1.0	12.544691455487072	-8.458130324487215	7.557660437281955	1.0781243546899832	1.1415333621512247	0.2523041539484311	0.056595861764729166	0.49788582796504016	52.042422210412504	0.02198658255414583	0.019272328880069578	3.482328005346512e-09	8.458130324487215	0.06340900746124145	
AIEALHGHELRPGR	ddPTM_K562_Methotrexat_30min_R1	1	AIEALHGHELRPGR	14	1	Q96PK6;A0A0A6YYI9;F8WDX3;A0A0A0MSL8;B8ZZ74;Q96PK6-3;Q96PK6-4;Q96PK6-2;Q96PK6-5	Q96PK6	RBM14;RBM14-RBM4	RNA-binding protein 14	0		102.97	0.0092679	9148000.0	2904.3	2151.7	2190.2	2434.3	2265.0	1953.2	2001.1	3219.8	2792.3	2904.9	False	True	2776.6304495106297	2507.2318523534987	1730.5069508539293	2220.888698494571	2562.887200759438	2330.6282567960993	2449.8976143131895	3106.557808999987	2662.4865824711565	2378.7944609434758	1.1672426916654937	1.0539926393468573	0.7274722466637898	0.9336194172966603	1.0773890904987846	0.9797518428186214	1.029890414887511	1.3059378857675104	1.119258778421387	1.0	11.216014906156959	-9.02396233952442	19.114123004254022	1.1611427065933955	0.9841880194893973	0.21459631228695453	0.12815415256423973	54.070936708329945	43128.51018832771	0.06181056514432337	0.036186730858223055	9.463192192508007e-10	9.02396233952442	-0.1769546871039982	
AIKVEQATKPS(ph)FESGR	ddPTM_K562_Methotrexat_30min_R1	1	AIKVEQATKPSFESGR	16	2	P38159;P38159-2;H0Y6E7;H3BT71	P38159	RBMX	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed	1	AIKVEQAT(0.005)KPS(0.942)FES(0.053)GR	102.39	0.0054382	30885000.0	1368.0	1165.7	1840.2	2501.8	1646.3	1359.5	1288.3	2022.8	2306.1	2920.7	True	False	1307.8643579969487	1358.3121114878795	1453.96716782093	2282.471078295081	1862.8173062296949	1622.2041342997638	1577.2340695216046	1951.6569774660456	2198.8899143490084	2391.732927838344	0.5468270904222574	0.5679196434007899	0.6079136808703095	0.9543168686304728	0.778856737952475	0.6782547145704588	0.65945242094698	0.8160012160011358	0.9193710086754429	1.0	11.223840585069848	-5.568824955480495	0.12006236495973008	1.1029843424272077	2.98396166766429e-14	0.5660694709785121	0.10331933168712981	43.58387859169254	0.6940928534204058	1.0752168173583123	7.882414813552784	2.698826988703106e-06	5.568824955480495	-1.102984342427178	
AILGSYDSELTPAEYS(ph)PQLTR	ddPTM_K562_Methotrexat_30min_R1	1	AILGSYDSELTPAEYSPQLTR	21	0	C9J9H5;C9JX80;Q9Y6D9-3;Q9Y6D9	C9J9H5	MAD1L1	Mitotic spindle assembly checkpoint protein MAD1	1	AILGSYDSELTPAEY(0.389)S(0.4)PQLT(0.211)R	109.84	3.5002e-05	4508800.0	983.95	815.92	1128.5	1073.1	1090.5	981.26	714.37	1500.7	1225.2	1357.5	True	False	940.6967361484634	950.7369117313121	891.6432718649705	979.0229890952319	1233.9198642066956	1170.87460744611	874.5856572569654	1447.9195303951421	1168.240719422577	1111.6435955560487	0.8462215227155814	0.8552533523622287	0.8020945520933505	0.8806986276977744	1.1099959277770892	1.05328237586835	0.7867500525827201	1.3025033708496174	1.050913012131571	1.0	10.118478603891479	-7.6540136944696515	5.27245920194558	1.0521283828294512	0.837767306681023	0.41811619949473044	0.11885218929808208	0.2117170312827478	9.021648650615981	0.035955046000723176	0.04655775047672016	2.2181264752213942e-08	7.6540136944696515	-0.21436107614842825	
AILVDLEPGTMDSVR	ddPTM_K562_Methotrexat_30min_R1	1	AILVDLEPGTMDSVR	15	0	Q5JP53;P07437;Q13509;A0A0B4J269;G3V5W4;G3V2R8;G3V2N6;G3V3R4;Q9BVA1;Q13885	Q5JP53;Q9BVA1	TUBB;TUBB3;TUBB2B;TUBB2A	Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-2A chain	0		109.39	0.0032568000000000007	13455000.0	1201.7	1092.1	1404.1	1381.7	1044.5	1263.2	1295.6	1835.9	1715.8	1699.2	False	True	1148.874706874952	1272.5509624739761	1109.3985981618125	1260.5685062276405	1181.8700579219565	1507.2955222121814	1586.1712803478924	1771.3303564019736	1636.032832505106	1391.4584144153503	0.8256622655573039	0.9145447318371095	0.797291954016426	0.9059332950006229	0.8493750482787826	1.0832487026538284	1.1399343767052892	1.2730027272473208	1.1757683992248655	1.0	10.442382077116546	-8.39328116227691	2.5657726503350142	1.1693929685187623	0.8579719834332589	0.7871230814931949	0.07179496804443943	0.1196546789203999	1.5370422446931755	0.027395306004790308	0.023313187003619878	4.0431405400385405e-09	8.39328116227691	-0.3114209850855034	
AIPELDAYEAEGLALDDEDVEELT(ph)ASQREAAER	ddPTM_K562_Methotrexat_30min_R1	2	AIPELDAYEAEGLALDDEDVEELTASQREAAER	33	1	P49736;F8WDM3;C9JZ21;H7C4N9	P49736	MCM2	DNA replication licensing factor MCM2	1	AIPELDAYEAEGLALDDEDVEELT(0.5)AS(0.5)QREAAER;AIPELDAY(0.006)EAEGLALDDEDVEELT(0.724)AS(0.27)QREAAER	51.306000000000004	0.0038610999999999997	24443000.0	1775.6799999999998	1525.9099999999999	1960.98	1948.56	1651.21	1522.0500000000002	1333.4299999999998	1593.6799999999998	1730.9099999999999	2029.98	True	False	1697.623233339197	1778.0406914647604	1549.397096377289	1777.732770134569	1868.3730572918273	1816.164621265874	1632.4856208353588	1537.6293710935774	1650.4403719031443	1662.3309510916151	1.021230599252457	1.0696069217126476	0.9320629537456636	1.0694216870396187	1.1239477049169475	1.0925409408236306	0.9820460960336101	0.9249839029248965	0.992847044578781	1.0	10.69899191945803	-8.893373962321437	6.631275001607057	0.9662684015236106	1.0507329525733238	0.34635179765019186	0.051326641490613924	0.2516946406336988	13.901596700346774	0.023217358896275426	0.015589824406735045	1.2782801285870347e-09	8.893373962321437	0.08446455104971318	
AIPELDAYEAEGLALDDEDVEELTAS(ph)QR	ddPTM_K562_Methotrexat_30min_R1	1	AIPELDAYEAEGLALDDEDVEELTASQR	28	0	P49736;F8WDM3;C9JZ21;C9J013;H7C4N9	P49736	MCM2	DNA replication licensing factor MCM2	1	AIPELDAYEAEGLALDDEDVEELT(0.142)AS(0.858)QR	230.56	1.7435999999999997e-70	261200000.0	709.72	697.4	741.3	693.89	815.42	830.48	711.24	1188.4	969.15	1166.5	True	False	678.5215585947332	812.6334962268575	585.7112604638928	633.0577410337248	922.662022623956	990.9585064018158	870.7536750807618	1146.6032984084673	924.0944280349248	955.2355463838899	0.710318581802492	0.8507153018992412	0.6131589875200344	0.6627242290450859	0.9659000087640758	1.037397017053184	0.9115591210744407	1.200335668777207	0.9673995398654793	1.0	9.899712713183954	-7.849655462557791	4.799268397905049	1.025635984616525	0.7128465609303082	0.7366178140661817	0.08954501078097049	0.10893189159082456	4.356991187810655	0.02838379903471778	0.03274146091251153	1.4136585931025061e-08	7.849655462557791	-0.31278942368621687	
AIPGDQHPES(ph)PVHTEPMGIQGR	ddPTM_K562_Methotrexat_30min_R1	5	AIPGDQHPESPVHTEPMGIQGR	22	0	Q14676;Q14676-3	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	1	AIPGDQHPES(1)PVHTEPMGIQGR;AIPGDQHPES(1)PVHTEPMGIQGR;AIPGDQHPES(1)PVHTEPMGIQGR;AIPGDQHPES(1)PVHTEPMGIQGR;AIPGDQHPES(0.992)PVHT(0.008)EPMGIQGR	161.56	7.249299999999999e-19	816410000.0	7859.900000000001	6948.099999999999	9081.1	8334.5	7249.4	6998.900000000001	7207.400000000001	7854.0	8015.2	8748.8	True	False	7514.388207178526	8096.155427493301	7175.101210574199	7603.827325146033	8202.823166969303	8351.338371129543	8823.842919094943	7577.770368310423	7642.57510146575	7164.307542394666	1.0488645500925615	1.1300681021277272	1.001506589173575	1.0613485364985404	1.144956873840108	1.1656867494465646	1.231639326882606	1.0577114848112115	1.0667569833149881	1.0	12.806611553918453	-6.2370841509796335	21.961404680198946	1.1013085415843733	1.0488642336342824	0.03286136410451235	0.06984133727170411	4856.518631146797	4378816.331488523	0.01835229964543338	0.8613948594008587	5.793164344230281e-07	6.2370841509796335	-0.05244430795009092	
AIPTESITDS(ph)PISAQDLLSR	ddPTM_K562_Methotrexat_30min_R1	2	AIPTESITDSPISAQDLLSR	20	0	Q9UDV7-2;Q9UDV7	Q9UDV7-2	ZNF282	Zinc finger protein 282	1	AIPT(0.001)ES(0.261)IT(0.03)DS(0.684)PIS(0.024)AQDLLSR;AIPTESIT(0.03)DS(0.964)PIS(0.006)AQDLLSR	140.96	1.0657e-09	19338500.0	1696.8	1536.13	1927.6100000000001	1677.9	1680.79	1500.51	1640.51	1795.56	1697.48	2428.3	True	False	1622.2107036909517	1789.9493727544636	1523.0310033492563	1530.8011121078086	1901.8433457679698	1790.4623211166881	2008.4361277581972	1732.4091370669032	1618.564525306427	1988.5113392918993	0.8157915278816636	0.90014541903083	0.7659151714425734	0.769822671794731	0.9564156402775196	0.9004033749962242	1.0100199521484212	0.87120908130391	0.8139579057581795	1.0	10.957473073656379	-7.765199240682801	24.999192599264532	0.9218825179350131	0.8157917802256878	0.4216572422228071	0.06438660370531167	105.30744360648063	700185.5767842367	0.020332206920691147	0.0239424059166296	1.7171204454422748e-08	7.765199240682801	-0.10609073770932531	
AIPTVNHSGTFS(ph)PQAPVPTTVPVVDVR	ddPTM_K562_Methotrexat_30min_R1	2	AIPTVNHSGTFSPQAPVPTTVPVVDVR	27	0	Q16513-4;Q16513-3;Q16513-2;Q16513;Q16513-5;B1AL79	Q16513-4	PKN2	Serine/threonine-protein kinase N2	1	AIPT(0.001)VNHS(0.074)GT(0.007)FS(0.919)PQAPVPTTVPVVDVR;AIPTVNHS(0.05)GT(0.155)FS(0.796)PQAPVPTTVPVVDVR	126.8	3.5186e-15	31985000.0	1911.3600000000001	1791.31	1891.06	2254.41	1923.99	1819.0900000000001	1989.96	2122.66	2363.33	2880.3199999999997	True	False	1827.3389029978434	2087.2935304360935	1494.152348863953	2056.7693754973275	2177.0284085603307	2170.6033973250137	2436.2591857371817	2048.004844664858	2253.4593041405133	2358.666137128544	0.7747340220106175	0.8849465795855189	0.6334734387983134	0.8720053012679667	0.9229913357770336	0.920267333793803	1.032897003686626	0.8682894168133998	0.9553956232584446	1.0	11.203755508073552	-7.534455078578433	4.512713644774793	0.943994546064556	0.772338843217705	0.5753096654634859	0.07096791605653115	0.14552778199513716	7.480651679233013	0.020576219519897524	0.02833217171307615	2.9210898886698732e-08	7.534455078578433	-0.17165570284685105	
AIPVSPS(ph)AVEEDEDEDGHTVVATAR	ddPTM_K562_Methotrexat_30min_R1	2	AIPVSPSAVEEDEDEDGHTVVATAR	25	0	G3V1L9;Q07157;A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8	G3V1L9	TJP1	Tight junction protein ZO-1	1	AIPVS(0.198)PS(0.802)AVEEDEDEDGHTVVATAR;AIPVS(0.135)PS(0.865)AVEEDEDEDGHTVVATAR	181.43	1.0964999999999999e-25	225576000.0	1936.27	1875.13	2193.11	2361.7	1935.26	1998.52	1983.54	1792.3200000000002	1965.85	1973.08	True	False	1851.1538892242336	2184.963360739702	1732.8061816214315	2154.653427775798	2189.780611100092	2384.7057053922513	2428.3993373118706	1729.2830897033525	1874.458062583148	1615.7360924638883	1.1457031243272835	1.3523021308559	1.0724561948597802	1.3335429206697345	1.3552835895129534	1.4759252556868592	1.5029678105467865	1.0702757076289067	1.160126379132081	1.0	10.657975858255515	-9.293614153698709	24.431976285436086	1.0864006588147301	1.3193866732884032	0.42828195506471944	0.1284834649497556	560.2748509985561	425442.09760804643	0.07473892852169066	0.035909174278197294	5.086111143514631e-10	9.293614153698709	0.23298601447367306	
AIQEGANSIVSSLHQAAAAACLS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	AIQEGANSIVSSLHQAAAAACLSR	24	0	P25054-2;P25054-3;P25054	P25054-2	APC	Adenomatous polyposis coli protein	1	AIQEGANSIVSS(0.001)LHQAAAAACLS(0.999)R	84.285	0.00043466	9174400.0	856.53	764.53	779.14	633.96	769.12	709.87	602.21	954.0	893.7	915.99	True	False	818.8779667800635	890.8555877119576	615.6091615780889	578.3817110863978	870.2727610808377	847.0423308682407	737.2709221505902	920.4472792676521	852.152082066566	750.0953348754216	1.091698519783576	1.187656483505412	0.8207078926578465	0.7710776006658638	1.1602162026849234	1.1292462324258028	0.982902956292934	1.227107057558921	1.1360583681114271	1.0	9.550930159264865														
AIS(ph)APTSPTR	ddPTM_K562_Methotrexat_30min_R1	1	AISAPTSPTR	10	0	B0QY95;Q9NQG6;Q9NQG6-2	B0QY95	MIEF1	Mitochondrial dynamics protein MID51	1	AIS(0.938)APT(0.06)S(0.002)PTR	80.737	0.029094	9370100.0	1850.4	1729.8	1387.1	1859.1	1842.1	1507.5	1725.8	1922.3	1682.9	1853.8	True	False	1769.0586316063989	2015.620048427327	1095.9666658430663	1696.1155894389574	2084.368438198216	1798.8030396887789	2112.8545813710953	1854.6916194299872	1604.6623463240724	1518.0588563107208	1.1653425848755778	1.327761463297813	0.7219526840392416	1.117292377952302	1.37304850173186	1.184936296910345	1.3918133493887603	1.2217521156836908	1.0570488355265886	1.0	10.568012010897373	-5.836671293166987	16.335710020173995	1.1673737588026003	0.22249773000973438	0.0	0.19046221051002762	34503.197129970795	2960774.9145262344	0.047438357516165174	173807.7712713941	1.4565610988265386e-06	5.836671293166987	-0.9448760287928659	
AIS(ph)ETEENSDELSGER	ddPTM_K562_Methotrexat_30min_R1	1	AISETEENSDELSGER	16	0	A7UKX8;F5GWH7;J3KN53;E7EPE2;Q00987-8;Q00987-9;Q00987;Q00987-11	A7UKX8	mdm2;MDM2	E3 ubiquitin-protein ligase Mdm2	1	AIS(0.991)ET(0.009)EENSDELSGER	254.89	8.312199999999999e-80	15155000.0	1719.5	1660.0	2258.2	1917.6	1867.0	1610.0	1482.7	1622.2	1845.2	2126.2	True	False	1643.9128388711654	1934.286784824467	1784.2346801289118	1749.4869852660677	2112.5432246436512	1921.1097140291429	1815.2332181011268	1565.146306528287	1759.4170547490514	1741.1245767007517	0.9441672703203166	1.1109410611443653	1.02475991896562	1.0048028777935936	1.213321121827307	1.103372923303078	1.0425636639629792	0.8989283865569658	1.0105061282191319	1.0	10.765803715542294	-9.054639096940676	7.897422512061626	0.9664851926200075	1.0710247909301112	0.26103177841851155	0.07289367504935422	0.41243349938686946	54.26370153686263	0.03471678698404749	0.020129280794633764	8.817813377364697e-10	9.054639096940676	0.10453959831010362	
AISAPTS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	1	AISAPTSPTR	10	0	B0QY95;Q9NQG6;Q9NQG6-2	B0QY95	MIEF1	Mitochondrial dynamics protein MID51	1	AIS(0.008)APT(0.053)S(0.884)PT(0.055)R	84.31	0.023083000000000003	79858000.0	3513.3	2922.6	3724.9	3238.4	3127.9	2939.6	2794.9	4023.2	3519.9	3746.0	True	False	3358.8595387066403	3405.509974293967	2943.094393770339	2954.49449994036	3539.273675609469	3507.636096496938	3421.7274710129072	3881.701775628533	3356.260617283321	3067.563100517832	1.0949602106439587	1.1101678637740449	0.9594242391537173	0.9631405787354839	1.1537737153677485	1.1434601283034138	1.115454632517678	1.265402421542125	1.0941129839241952	1.0	11.5828773054428	-7.78164543946788	24.998280668725283	1.1420464708373088	1.0323336206829783	0.2675067674146734	0.07656493350497862	291.2356505211848	360305.38489469106	0.02398889018033576	0.027233015386119674	1.6533110200969044e-08	7.78164543946788	-0.10971285015433052	
AISET(ph)EENSDELSGER	ddPTM_K562_Methotrexat_30min_R1	1	AISETEENSDELSGER	16	0	A7UKX8;F5GWH7;J3KN53;E7EPE2;Q00987-8;Q00987-9;Q00987;Q00987-11	A7UKX8	mdm2;MDM2	E3 ubiquitin-protein ligase Mdm2	1	AIS(0.349)ET(0.651)EENSDELSGER	281.49	1.5280999999999997e-148	15305000.0	1164.8	1248.2	1293.3	1069.7	756.76	947.25	1208.8	1050.9	1321.3	1284.9	True	False	1113.5967866921396	1454.4438342276496	1021.8540039902229	975.9210618163916	856.2872044356345	1130.2926562820537	1479.904170796953	1013.9392513442099	1259.8730513981798	1052.1921590644329	1.0583587580450184	1.3822986815648606	0.9711667162572419	0.9275121976618239	0.8138125693666173	1.0742264581091963	1.4064961024921765	0.9636445611282297	1.1973792434629131	1.0	10.039182488924592	-6.780703260155369	24.99988597513657	1.0445859061719434	1.2203288885209682	0.14664480897804555	0.16987182428871878	422.2426560830867	547969.5306727422	0.046711658811930505	0.09746669608165279	1.6569016859220012e-07	6.780703260155369	0.17574298234902486	
AIST(ph)PETPLTK	ddPTM_K562_Methotrexat_30min_R1	2	AISTPETPLTK	11	0	E9PIQ6;A0A3B3ITS5;Q14181	E9PIQ6	POLA2	DNA polymerase alpha subunit B	1	AIS(0.115)T(0.885)PETPLTK;AIS(0.03)T(0.932)PET(0.038)PLTK	190.26	0.00010077	23926900.0	6706.6	5463.5	10392.6	7438.599999999999	5807.2	4944.9	5089.700000000001	6856.700000000001	6100.8	7498.1	True	False	6411.785894256095	6366.2505113785965	8211.335283282144	6786.469487171553	6570.948588189936	5900.431940933356	6231.194786652261	6615.545974585445	5817.175139612517	6140.121431925461	1.0442441514133773	1.036828111945373	1.3373245748182503	1.1052663310346624	1.0701659016097624	0.9609633956511276	1.014832500584315	1.0774291759423553	0.9474039241905233	1.0	12.584051472424369	-7.9038690418491555	2.9935824574710774	1.0064706661581497	1.139692056515567	0.3469069606661884	0.08409079526449897	0.3127422107323517	5.644935698092416	0.02897491311872609	0.03334755253558514	1.2477597098358614e-08	7.9038690418491555	0.1332213903574173	
AIST(ph)PETPLTKR	ddPTM_K562_Methotrexat_30min_R1	1	AISTPETPLTKR	12	1	E9PIQ6;A0A3B3ITS5;Q14181	E9PIQ6	POLA2	DNA polymerase alpha subunit B	1	AIS(0.067)T(0.933)PETPLTKR	89.74700000000001	0.017206	20066000.0	1719.8	1737.9	2804.9	2034.7	1486.0	1294.5	1454.2	1391.7	1527.9	1910.3	True	False	1644.1996512303745	2025.0584357508694	2216.1898212264578	1856.3210100755455	1681.4350465026585	1544.6438042302645	1780.3413676149323	1342.7531221769314	1456.868262492455	1564.3261588145278	1.051059359945995	1.2945244342685494	1.4167057226134496	1.1866585491879111	1.074862193557434	0.9874179981755347	1.138088344034408	0.8583587985222287	0.9313072304540977	1.0	10.611325627644138	-7.838753827200474	2.230360394493297	0.9839920043686764	1.262371427167324	0.5604130741076201	0.10675956987140708	0.23019748196971618	2.3455036819193094	0.03810085707400165	0.0463485687003642	1.4495932992162252e-08	7.838753827200474	0.2783794227986477	
AIT(ph)PPLPESTVPFSNGVLK	ddPTM_K562_Methotrexat_30min_R1	1	AITPPLPESTVPFSNGVLK	19	0	Q92667-2;Q92667;I3NI36	Q92667-2	AKAP1	A-kinase anchor protein 1, mitochondrial	1	AIT(0.999)PPLPESTVPFSNGVLK	120.39	0.00021465	4874300.0	1723.1	1189.6	1933.7	1778.6	1303.5	1117.1	1307.1	1606.5	1729.3	2081.3	True	False	1647.354587181683	1386.1611802573402	1527.8427955740303	1622.6728994546454	1474.9330976555966	1332.963764932891	1600.2504480879368	1549.9984844271326	1648.9052204517325	1704.356401790649	0.9665552260377711	0.8133047634878461	0.8964338644011499	0.9520736964110414	0.8653900651917561	0.7820921513437205	0.9389177324687868	0.9094333103091916	0.9674650317969541	1.0	10.735011336969743	-9.726710875714643	1.4730218904898684	0.9988960654302099	0.8821336180227827	0.33345217402123006	0.05481907566490924	0.44600217547802345	1.8940403058893256	0.05154578142296384	0.015963493022559328	1.8762431698832822e-10	9.726710875714643	-0.11676244740742725	
AIT(ph)PPQQPYK	ddPTM_K562_Methotrexat_30min_R1	2	AITPPQQPYK	10	0	Q9NYV4-2;J3QSD7;Q9NYV4-3;Q9NYV4	Q9NYV4-2	CDK12	Cyclin-dependent kinase 12	1	AIT(1)PPQQPYK;AIT(1)PPQQPYK	107.03	0.008853399999999999	133858000.0	6843.0	5008.4	9004.3	7262.4	5021.5	5010.7	4574.5	6714.8	6328.7	8674.9	True	False	6542.189913576847	5835.95297175594	7114.420481040104	6625.716667603399	5681.915266496036	5978.9468596806355	5600.448071898294	6478.636678015133	6034.48011835591	7103.791548500304	0.9209433960598101	0.8215264949585943	1.001496233731977	0.9327014485668809	0.7998426231546105	0.8416557297409527	0.7883744946148675	0.9119970136768514	0.849473140808849	1.0	12.794373532966501	-5.884017332974172	18.330877124797148	0.8782275840726324	6.634441164958091	0.019876541213113108	0.07329977488321643	1123.7274394143265	176435.930924547	0.017805814901976632	1782.3550771951598	1.3061187590456284e-06	5.884017332974172	5.7562135808854595	
AITSLLGGGS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	AITSLLGGGSPK	12	0	A0A590UJS4;Q6KC79-2;Q6KC79	A0A590UJS4;Q6KC79	NIPBL	Nipped-B-like protein	1	AIT(0.123)S(0.238)LLGGGS(0.639)PK;AITSLLGGGS(1)PK	173.59	0.00028313	221109000.0	13940.6	10772.3	19861.1	15647.9	10546.8	9225.0	9510.3	12777.3	13055.9	17395.1	True	False	13327.787916003119	12552.239477207595	15692.526527990578	14276.072901932044	11933.889063562747	11007.600690632826	11643.226865925095	12327.91511675742	12448.93405869182	14244.678828034637	0.9356327423664333	0.8811879599913345	1.1016413018106428	1.0022039158816007	0.8377787388281387	0.7727517639056214	0.8173737720930793	0.8654400190824326	0.8739357488489912	1.0	13.798135473417235	-7.7641278145092	24.995921076471525	0.8478702692222232	0.9817733699567708	0.36244804036198575	0.07605152499011676	71.20872560311825	662069.6295097105	0.02371708513650696	0.028119811212688035	1.7213618971118743e-08	7.7641278145092	0.1339031007345476	
AKADS(ph)PVNGLPK	ddPTM_K562_Methotrexat_30min_R1	1	AKADSPVNGLPK	12	1	Q96S94;Q96S94-3;A0A0A0MSF3	Q96S94	CCNL2	Cyclin-L2	1	AKADS(1)PVNGLPK	116.96	0.0031355	9707100.0	3468.7	2253.0	5499.4	3468.6	2598.2	1883.6	1764.9	2261.0	2605.4	3755.2	True	False	3316.220101304107	2625.2699555479066	4345.151093747647	3164.513223348917	2939.9088410654163	2247.579041829376	2160.7237516872447	2181.4793484530014	2484.2755226767713	3075.09689136801	1.078411581310802	0.8537194268308111	1.4130127430926678	1.0290775657287108	0.9560377916279402	0.7308969834864298	0.7026522506502256	0.7094018255413516	0.8078690234607855	1.0	11.586416152835563	-7.9905224145779625	2.580962652526347	0.7674234084806524	1.1003187700115111	0.4693600657812239	0.15130268384010678	0.23859153317388307	3.2097268125849094	0.052374673724330766	0.05740052526404558	1.0220628090716332e-08	7.9905224145779625	0.33289536153085875	
AKPAMPQDSVPS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	AKPAMPQDSVPSPR	14	1	P53396	P53396	ACLY	ATP-citrate synthase	1	AKPAMPQDSVPS(1)PR	87.66799999999999	0.019844	48370000.0	7419.8	4955.3	8293.7	7124.7	5395.8	4620.1	5392.0	7226.0	7517.2	10355.0	True	False	7093.634476217663	5774.0790993016135	6552.965710116537	6500.088612810364	6105.442277199901	5512.868937755309	6601.2932568970655	6971.857484264207	7167.72701276803	8479.60915799844	0.8365520561200102	0.6809369384501855	0.7727910081722827	0.7665552140076076	0.7200145859837074	0.6501324335869022	0.778490274008721	0.8221908998822148	0.84528978626415	1.0	13.049782054307629	-9.999135683909522	1.0977013696988045	0.9967945680657934	0.7382466326168498	0.7065105846904871	0.050710807683635784	0.2842404055320655	0.7710977331325721	0.0482173092922974	0.015616240144292276	1.0019921430310672e-10	9.999135683909522	-0.2585479354489436	
AKPPADPAAAAS(ph)PCR	ddPTM_K562_Methotrexat_30min_R1	2	AKPPADPAAAASPCR	15	1	Q9GZT9-2;Q9GZT9	Q9GZT9-2	EGLN1	Egl nine homolog 1	1	AKPPADPAAAAS(1)PCR;AKPPADPAAAAS(1)PCR	105.52	0.0011779000000000002	93786000.0	10673.8	7755.299999999999	13577.6	11149.9	9111.8	8754.8	7559.2	10306.2	9523.0	12566.7	True	False	10204.592532447245	9036.731507439272	10727.847308882432	10172.405578336524	10310.16141098448	10446.541195268539	9254.543024394707	9943.725104390234	9080.277808571009	10290.748856187258	0.9916277887115852	0.8781412930902482	1.0424748926247842	0.9885000324558907	1.001886408372074	1.015139067259193	0.8993070527448022	0.9662780856236349	0.8823728900070805	1.0	13.32906035029421	-11.345075333685548	6.251774612645445	0.9999999957233329	0.9643796876770473	0.03934311478807406	0.054595427565394185	26652900.06901972	0.48642164860720033	0.05268210252219568	0.013424642894754417	4.517775712366697e-12	11.345075333685548	-0.035620308046285576	
AKS(ph)LDGVTNDR	ddPTM_K562_Methotrexat_30min_R1	1	AKSLDGVTNDR	11	1	E9PRL8;E9PQ71;E9PIP9;E9PJ54;E9PM00;Q9UBM7	E9PRL8	DHCR7	7-dehydrocholesterol reductase	1	AKS(1)LDGVTNDR	139.78	0.00012205	17036000.0	2301.9	2005.3	3829.6	3338.6	1859.4	1715.1	1770.5	2123.7	2444.7	2780.3	True	False	2200.7112322172343	2336.6417407280137	3025.819294580496	3045.9101215108944	2103.9436914313906	2046.5188015722867	2167.5796942389193	2049.0082672753806	2331.046430601022	2276.760728342161	0.966597501802351	1.0263009685824365	1.3290018827686678	1.3378261859465552	0.9240952135376085	0.8988730243350926	0.9520454509144917	0.8999664487218119	1.0238433936351272	1.0	11.152766966926082	-7.790310699455521	24.9998750420905	0.9423676697003684	1.1667487965573227	0.4610091394120511	0.113779041129307	199.93267887190262	173121.91677918163	0.03864987935555426	0.04383213984076928	1.6206502499932816e-08	7.790310699455521	0.22438112685695422	
AKS(ph)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK	ddPTM_K562_Methotrexat_30min_R1	9	AKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFK	32	1	A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;Q5RI18;A0A1W2PRI6	A0A1W2PPS1	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	1	AKS(0.698)PQPPVEEEDEHFDDT(0.301)VVCLDT(0.001)YNCDLHFK;AKS(0.841)PQPPVEEEDEHFDDT(0.159)VVCLDTYNCDLHFK;AKS(0.992)PQPPVEEEDEHFDDT(0.008)VVCLDTYNCDLHFK;AKS(0.925)PQPPVEEEDEHFDDT(0.07)VVCLDT(0.004)Y(0.001)NCDLHFK;AKS(0.743)PQPPVEEEDEHFDDT(0.087)VVCLDT(0.009)Y(0.161)NCDLHFK;AKS(0.839)PQPPVEEEDEHFDDT(0.16)VVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(0.979)PQPPVEEEDEHFDDT(0.021)VVCLDTYNCDLHFK;AKS(0.969)PQPPVEEEDEHFDDT(0.031)VVCLDTYNCDLHFK	81.441	4.9017e-06	783128800.0	14193.019999999999	8896.67	21179.9	15170.81	9342.470000000001	8483.869999999999	7842.449999999999	13553.719999999998	13236.529999999999	20494.7	True	False	13569.111835042297	10366.69349996644	16734.528430458915	13840.808641502039	10571.16855915188	10123.257807180385	9601.319047209268	13077.027985278368	12621.166609417653	16782.911232296545	0.8085076329862422	0.6176933999398793	0.9971171389058816	0.8246965291020065	0.6298769273598391	0.6031884258375557	0.572089008534632	0.7791871031357966	0.7520248683154475	1.0	14.03470537280631	-10.413877539357536	1.884901011440283	0.9998527756344495	0.7250512231394136	0.30023339336494015	0.12346944329478052	3.455609633307868	14.066644258471998	0.12759512587093955	0.03558254966475616	3.8558706865658376e-11	10.413877539357536	-0.2748015524950359	
AKS(ph)PTPESSTIASYVTLR	ddPTM_K562_Methotrexat_30min_R1	1	AKSPTPESSTIASYVTLR	18	1	B4DJX4;Q9HAU0-5;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;H0YGJ6;A0JP02	B4DJX4	PLEKHA5	Pleckstrin homology domain-containing family A member 5	1	AKS(0.754)PT(0.246)PESSTIASYVTLR	77.543	0.0093598	24139000.0	726.34	504.98	946.15	486.14	572.68	391.0	335.59	612.99	564.08	691.17	True	False	694.4109632949595	588.4193618076258	747.5660449047784	443.52086098104184	647.9974578944438	466.55521626422063	410.8546001635913	591.4307942539604	537.8560439209006	565.9924154257635	1.226890934170194	1.039624111155256	1.3208057644066264	0.7836162621497439	1.1448871755763592	0.8243135482889077	0.7259012470238299	1.0449447344785725	0.9502884301308215	1.0	9.144638910144685	-7.261554510069836	24.9999999012293	0.9234125380879095	1.1801586527140595	0.45940910306411065	0.13434987041110213	9.719460718659398	2110714.870699242	0.036817556631948835	0.05879274511059894	5.475773679820982e-08	7.261554510069836	0.25674611462615005	
AKSPQPPVEEEDEHFDDT(ph)VVCLDTYNCDLHFK	ddPTM_K562_Methotrexat_30min_R1	2	AKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFK	32	1	A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;Q5RI18;A0A1W2PRI6	A0A1W2PPS1	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	1	AKS(0.008)PQPPVEEEDEHFDDT(0.991)VVCLDT(0.001)YNCDLHFK;AKS(0.098)PQPPVEEEDEHFDDT(0.897)VVCLDT(0.003)Y(0.001)NCDLHFK	60.82899999999999	0.00070234	625076000.0	6725.0	4692.9	10044.0	7211.0	4831.8	4612.9	3427.5	5811.9	6362.299999999999	10102.099999999999	True	False	6429.377052287633	5468.321959339001	7935.9016593812685	6578.822825799753	5467.266391447882	5504.277639655301	4196.204124260884	5607.492182783723	6066.518061689729	8272.51179864955	0.7771976890183704	0.6610231683479352	0.9593098024564641	0.7952630332753006	0.6608955689057329	0.6653695725830031	0.5072466774778001	0.6778463807932098	0.7333344707565193	1.0	13.014109728841612	-5.974378143987175	15.680045763155277	0.7260296633419759	0.9061958233615752	0.0	0.140236070087574	17146672.8164991	284084920.39165705	0.035749465734412116	77705982.60754591	1.0607715319687455e-06	5.974378143987175	0.1801661600195993	
AKTQT(ph)PPVS(ph)PAPQPTEER	ddPTM_K562_Methotrexat_30min_R1	2	AKTQTPPVSPAPQPTEER	18	1	Q14247-3;Q14247;H0YEV2;H0YCD9;Q14247-2	Q14247-3	CTTN	Src substrate cortactin	2	AKT(0.02)QT(0.981)PPVS(0.999)PAPQPT(0.001)EER;AKT(0.347)QT(0.657)PPVS(0.996)PAPQPTEER	101.92	0.0016726	36924000.0	3888.6	2946.5	5127.799999999999	3606.0	3047.2	2773.5	2346.3	3455.4	3491.7	4440.8	True	False	3717.6618000781677	3433.359043063429	4051.544855533184	3289.8675786761787	3447.9602111055874	3309.4396222731843	2872.5175016056355	3333.8716234606372	3329.3716291281526	3636.5280877681766	1.0223107619003116	0.9441310393316837	1.114124449955703	0.9046726710958112	0.9481461789620556	0.9100547396855845	0.7899065900982956	0.9167732361739335	0.9155357936947675	1.0	11.828346004073975	-7.307076050715191	23.129209536864064	0.9050060870756923	1.018582966966333	0.4090932910671645	0.06252432266525772	171.78822603954947	87063.75018490838	0.01752817453401741	0.02599872983988384	4.930874502517679e-08	7.307076050715191	0.1135768798906408	
AKTQT(ph)PPVSPAPQPTEER	ddPTM_K562_Methotrexat_30min_R1	2	AKTQTPPVSPAPQPTEER	18	1	Q14247-3;Q14247;H0YEV2;H0YCD9;Q14247-2	Q14247-3	CTTN	Src substrate cortactin	1	AKT(0.069)QT(0.927)PPVS(0.004)PAPQPTEER;AKT(0.015)QT(0.982)PPVS(0.003)PAPQPTEER	110.33	0.0039586	85769000.0	6065.700000000001	4732.8	7627.8	5346.8	4959.7	3965.9	3984.6000000000004	6225.5	5581.1	6682.2	True	False	5799.059090864107	5514.814756154966	6026.829020054603	4878.054345442533	5611.987483270011	4732.254046501972	4878.247980606835	6006.545636353007	5321.635879178376	5471.988828158105	1.0597717343688537	1.0078263917090773	1.1013964409140176	0.8914591200078359	1.0255846017797938	0.8648142741356563	0.8914945066232662	1.0976896746287466	0.9725231622904577	1.0	12.4178495694222	-7.252803726734247	24.982915454655675	0.9629282940307884	1.051481006674433	0.27417647829060043	0.06917790390521975	923.2207935191765	2670869.5995135275	0.019313548160701945	0.032800596734497645	5.5872264450586856e-08	7.252803726734247	0.0885527126436445	
AKTQTPPVSPAPQPTEERLPS(ph)SPVYEDAASFK	ddPTM_K562_Methotrexat_30min_R1	2	AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK	32	2	Q14247-3;Q14247;H0YEV2;H0YCD9;Q14247-2	Q14247-3	CTTN	Src substrate cortactin	1	AKTQTPPVSPAPQPT(0.024)EERLPS(0.473)S(0.473)PVY(0.027)EDAAS(0.003)FK;AKTQTPPVSPAPQPT(0.066)EERLPS(0.438)S(0.438)PVY(0.056)EDAAS(0.002)FK	75.301	3.0688e-06	33209000.0	4311.700000000001	2312.6000000000004	5595.700000000001	4860.0	2504.4	2611.5	2026.5	2970.5	2938.4	5556.700000000001	True	False	4122.1628306838065	2694.7178425211214	4421.239039765012	4433.93134563678	2833.7724969456654	3116.1354150230463	2480.9942108868518	2866.0258313045706	2801.7944253601863	4550.327784476094	0.9059045910378114	0.5922030170473488	0.9716308910422935	0.9744202078724059	0.6227622780524446	0.6848155918907775	0.5452341739755575	0.6298504123334387	0.6157346367263459	1.0	12.151754758765778	-7.7790359800504145	24.99956813722235	0.6577545385557528	0.8497364493391553	0.23431760355899534	0.15302827914549652	325.0275904787003	461765.9460079784	0.04643337396394354	0.052765010857791485	1.663274847118238e-08	7.7790359800504145	0.19198191078340243	
ALAAGADS(ph)PKTEEARPSPAPGPGTPTGTPTR	ddPTM_K562_Methotrexat_30min_R1	2	ALAAGADSPKTEEARPSPAPGPGTPTGTPTR	31	2	Q4KMP7	Q4KMP7	TBC1D10B	TBC1 domain family member 10B	1	ALAAGADS(0.946)PKT(0.042)EEARPS(0.012)PAPGPGTPTGTPTR;ALAAGADS(0.754)PKT(0.237)EEARPS(0.008)PAPGPGT(0.001)PTGTPTR	63.803000000000004	0.00014738	29860200.0	1196.29	1021.79	2152.8	1554.2	1220.9	1126.7600000000002	962.3399999999999	1401.8	1323.93	1739.4699999999998	True	False	1143.7025239972004	1190.6234300396334	1700.9566997526886	1417.9456990511696	1381.4697498486523	1344.4904232170675	1178.1692419959797	1352.4978994521964	1262.380783272226	1424.4351271910716	0.8029165401533838	0.8358565492466439	1.1941271787553474	0.9954442094160519	0.9698369012935357	0.9438762057689128	0.8271133023230631	0.949497715715048	0.8862325557511276	1.0	10.476174203402888	-8.530951947090003	24.67573191566565	0.9077870018810921	0.9666842706692569	0.03234227629991859	0.1066390981166217	555.4203860924122	1697617.968987659	0.04297896299802147	0.0333531688885297	2.9447474400465574e-09	8.530951947090003	0.058897268788164814	
ALAAGADSPKT(ph)EEARPSPAPGPGTPTGTPTR	ddPTM_K562_Methotrexat_30min_R1	1	ALAAGADSPKTEEARPSPAPGPGTPTGTPTR	31	2	Q4KMP7	Q4KMP7	TBC1D10B	TBC1 domain family member 10B	1	ALAAGADS(0.107)PKT(0.429)EEARPS(0.308)PAPGPGT(0.147)PT(0.007)GT(0.002)PTR	73.934	5.7644e-06	28852000.0	710.3	614.02	709.39	625.93	526.75	481.03	379.75	681.27	578.15	853.74	True	False	679.0760624892058	715.4763684445297	560.4987333879412	571.0556887190185	596.026857836659	573.9822395897135	464.91860428536006	657.3093479524877	551.271932691938	699.1194130902551	0.9713305763997406	1.0233965114514179	0.8017210263271317	0.8168213870572296	0.8525394184122205	0.8210074399916761	0.665005999805272	0.9401961033338238	0.7885232799575682	1.0	9.44939508594687	-6.761614772235172	24.999999995293148	0.8268933588928765	0.9973635862238276	0.35980895193814255	0.08559562266670935	4.192890178274186	598056.5063694917	0.021011479666943868	0.04871626814835474	1.7313514211325972e-07	6.761614772235172	0.17047022733095107	
ALAEEAS(ph)EEELPSDVDLNDPYFAEEVK	ddPTM_K562_Methotrexat_30min_R1	1	ALAEEASEEELPSDVDLNDPYFAEEVK	27	0	Q9H501	Q9H501	ESF1	ESF1 homolog	1	ALAEEAS(1)EEELPSDVDLNDPYFAEEVK	90.363	3.4262e-05	4321800.0	1118.5	963.55	2270.8	1499.1	1158.1	918.13	965.1	1213.2	1159.5	1516.9	True	False	1069.332079254084	1122.7602599503703	1794.1901123181	1367.6762305029	1310.4104490947036	1095.5456284109173	1181.5482422535893	1170.5310683516946	1105.595098082336	1242.1747109384687	0.8608548136084647	0.9038666220326766	1.4443943323903135	1.1010337100403649	1.0549324805563642	0.8819577622726094	0.9511932837216789	0.9423240209642917	0.8900479846728275	1.0	10.278652386463671	-8.124911228971964	4.760342390057166	0.9311944803893418	1.089902518270528	0.17901164237807488	0.14914735214284322	0.4137261470312193	14.271605647087748	0.05336439107053589	0.05367048823233042	7.5004750550948e-09	8.124911228971964	0.15870803788118615	
ALAMPGRPES(ph)PPVFR	ddPTM_K562_Methotrexat_30min_R1	1	ALAMPGRPESPPVFR	15	1	Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ERU2	Q63ZY3-3	KANK2	KN motif and ankyrin repeat domain-containing protein 2	1	ALAMPGRPES(1)PPVFR	79.88600000000001	0.01787	0.0	1760.2	1628.5	1866.9	1808.3	1561.1	1298.9	1431.1	1536.8	1621.2	2130.5	True	False	1682.8237156039704	1897.5819452329197	1475.0632026980177	1649.7691465668688	1766.4120128501354	1549.8940419580463	1752.0606045892787	1482.7498729334684	1545.8307658569054	1744.6458050329013	0.9645646759642625	1.0876602802464734	0.8454800386661866	0.9456183838620222	1.0124760038710685	0.8883717471402842	1.0042500314591003	0.8498859015715835	0.8860427494208507	1.0	10.768718457377975	-6.75368642137016	24.999542877164316	0.9284634494904073	1.0261124528330958	0.2630308485605334	0.06500562945602895	225.08413365666814	725770.9010813902	0.016145466749788694	0.04105656186251381	1.763248725609644e-07	6.75368642137016	0.09764900334268856	
ALAPS(ph)PPAEFIYYCVDEDELKR	ddPTM_K562_Methotrexat_30min_R1	1	ALAPSPPAEFIYYCVDEDELKR	22	1	K7EPZ6;A0A0A0MS90;Q9UIS9-4;Q9UIS9-11;Q9UIS9-7;K7EN65	K7EPZ6	MBD1	Methyl-CpG-binding domain protein 1	1	ALAPS(0.998)PPAEFIY(0.001)YCVDEDELKR	62.648	0.009235	3933700.0	898.25	577.6	973.68	709.76	479.9	435.77	481.75	811.62	791.57	863.27	True	False	858.7640055341813	673.0385824786821	769.317874124488	647.53644277349	543.0152616531807	519.9763851443975	589.7947007622703	783.0748645694049	754.7700834748034	706.9234377426669	1.21479068267473	0.9520671497719961	1.0882619433033054	0.9159923242058429	0.7681387158234924	0.7355483739579708	0.8343119909075166	1.1077223115842687	1.06768292459636	1.0	9.465410164399016	-5.353645983040458	0.9490784132887117	0.9164534232985986	2.3922815163152538	0.3083502945134793	0.12353894739099776	13.322981987045964	2.6446131909011354	0.04547503290336864	30.387090314562887	4.429492972063035e-06	5.353645983040458	1.4758280930166552	
ALAPS(ph)PPAEFIYYCVDEDELQPYTNRR	ddPTM_K562_Methotrexat_30min_R1	2	ALAPSPPAEFIYYCVDEDELQPYTNRR	27	1	Q9UIS9-6;Q9UIS9-5;Q9UIS9;Q9UIS9-9;Q9UIS9-12	Q9UIS9-6	MBD1	Methyl-CpG-binding domain protein 1	1	ALAPS(0.972)PPAEFIY(0.021)Y(0.006)CVDEDELQPYTNRR;ALAPS(0.89)PPAEFIY(0.055)Y(0.055)CVDEDELQPYTNRR	80.83	0.00034441	21678000.0	1233.45	967.73	1213.63	1450.09	1290.3000000000002	906.57	1178.61	1918.28	2047.7800000000002	2201.7	True	False	1179.229014891328	1127.6309339025186	958.9056482352545	1322.962861109966	1459.9970662869327	1081.7518220170193	1442.9432947906987	1850.8130051085463	1952.5791547658869	1802.9507950907948	0.6540550180860278	0.6254363330230164	0.5318534764488484	0.7337764650661711	0.8097819808850684	0.5999896530523693	0.8003231695061503	1.0265465980258996	1.082990817099674	1.0	10.81614430891589	-9.127387419168459	2.7243528466988884	1.0483880571306134	0.6621689704769796	0.839323240071415	0.07366594954621475	0.11346548644971546	1.6163092546435167	0.044709327846826484	0.022807102764664754	7.457831740655963e-10	9.127387419168459	-0.3862190866536338	
ALAS(ph)PEQLAQLPSSGVPR	ddPTM_K562_Methotrexat_30min_R1	3	ALASPEQLAQLPSSGVPR	18	0	Q9Y3Q8;H7BZ77;Q9Y3Q8-2	Q9Y3Q8	TSC22D4	TSC22 domain family protein 4	1	ALAS(1)PEQLAQLPSSGVPR;ALAS(1)PEQLAQLPSSGVPR;ALAS(1)PEQLAQLPSSGVPR	173.34	8.4403e-12	34526300.0	4618.87	4460.2	5480.799999999999	5251.700000000001	4397.57	4270.88	4045.91	4964.2	4844.6	5631.700000000001	True	False	4415.830005278781	5197.172239562703	4330.454979563609	4791.29161479026	4975.92753529522	5096.167115188066	4953.3083087931	4789.606272264656	4619.375603423616	4611.744557711233	0.9575183425749663	1.126942781527781	0.9390058198957956	1.0389325676719905	1.0789685926934183	1.1050410644854207	1.0740638920494292	1.0385671219053152	1.0016546982637238	1.0	12.171096889687924	-6.199364554232265	21.104214220096164	1.0463783776852158	0.9575128832328715	0.19869997002497286	0.05249478957635058	19247.197160217198	6541891.71814945	0.013079441540407888	21.70848904516646	6.318812167711785e-07	6.199364554232265	-0.08886549445234426	
ALASGITMS(ph)S(ph)EVVNR	ddPTM_K562_Methotrexat_30min_R1	1	ALASGITMSSEVVNR	15	0	Q9Y6X0	Q9Y6X0	SETBP1	SET-binding protein	2	ALAS(0.083)GIT(0.277)MS(0.649)S(0.991)EVVNR	152.4	3.4705000000000004e-09	31448000.0	0.0	0.0	0.0	135.14	0.0	0.0	0.0	67.217	0.0	0.0	True	False	0.0	0.0	0.0	123.2924860183856	0.0	0.0	0.0	64.85294001104171	0.0	0.0											0.0														
ALASNTSFFSGCS(ph)PIEEEAH	ddPTM_K562_Methotrexat_30min_R1	2	ALASNTSFFSGCSPIEEEAH	20	0	O95239;Q2VIQ3	O95239	KIF4A;KIF4B	Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B	1	ALASNTSFFS(0.011)GCS(0.989)PIEEEAH;ALASNTSFFS(0.428)GCS(0.572)PIEEEAH	162.31	1.7608e-44	46556000.0	1338.47	1216.44	1639.6599999999999	1536.84	1525.91	1285.44	1230.74	1443.15	1532.0300000000002	1710.0500000000002	True	False	1279.632461438726	1417.4360340553458	1295.517773279679	1402.1076232980292	1726.59391104231	1533.833087454423	1506.7647742940462	1392.3935965147925	1460.8062596939026	1400.3433742767013	0.9137990616763376	1.012206048953867	0.9251429307107149	1.0012598688676906	1.2329789555608974	1.0953264146707384	1.0759966462313668	0.9943229797005931	1.043177185344581	1.0	10.451564914421825	-7.5327998117865	24.99993195153156	1.0784223405155187	0.9576710551907417	0.4097794128124088	0.06678417638675377	211.30740629441553	532467.4225863464	0.020541199847712733	0.02654846146268947	2.9322445530719447e-08	7.5327998117865	-0.12075128532477697	
ALCTGTYNT(ph)RARTRLS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	ALCTGTYNTRARTRLSR	17	3	Q16591	Q16591	MYC		2	ALCT(0.168)GT(0.247)Y(0.023)NT(0.562)RART(0.007)RLS(0.993)R	73.498	0.016019	0.0	3822.9	2701.8	2562.6	3629.1	2464.1	2230.2	2356.6	2954.8	2932.3	3395.5	True	False	3654.8498934112113	3148.226527252255	2024.745280001039	3310.942437541239	2788.1723405701223	2661.1545864768896	2885.1275387988917	2850.878009203417	2795.9780130287486	2780.5420469322753	1.3144379159608628	1.1322348211657651	0.728183658375138	1.1907543139634034	1.002744174879954	0.9570632421879381	1.0376133466429698	1.0252957736599388	1.0055514233685132	1.0	11.441150438183774	-6.522673909197397	24.99998137594534	0.9971835670531022	1.268887238622186	0.4603662633193828	0.10772596089755203	5.094540348861592	621647.310298035	0.026277574060917273	0.07119175921609738	3.001415291269865e-07	6.522673909197397	0.2717036715690839	
ALDQASEEIWNDFREAAEAHR	ddPTM_K562_Methotrexat_30min_R1	3	ALDQASEEIWNDFREAAEAHR	21	1	F8VZX9;F8VY03;G3V1U3;F8VRR3;F8VQZ7;P50579-3;P50579-2;P50579	F8VZX9	METAP2	Methionine aminopeptidase 2	0	;;	89.669	0.002805	17922700.0	3419.4	3101.3999999999996	3440.7	3667.4	3238.3	2697.4	2818.3	3539.8	3015.36	3597.9	False	True	3269.087270273953	3613.8536352136166	2718.5440899475434	3345.8847360058285	3664.1932106928434	3218.6343742995095	3450.375516675258	3415.303227622259	2875.1765717581293	2946.285445636176	1.1095623050087993	1.2265796040116188	0.9227022093103889	1.1356281656149474	1.2436653808000784	1.0924380660627153	1.1710934260581247	1.1591895254686737	0.9758649067817349	1.0	11.524681494755578	-9.764969330403972	24.992718610534794	0.9879323706049664	1.1324894345404404	0.32404620127882555	0.08358096303552047	111.7382649921926	791068.3779547224	0.07075024786547325	0.02112286409215478	1.7180297090229767e-10	9.764969330403972	0.14455706393547396	
ALDQS(ph)DNDMSAVYR	ddPTM_K562_Methotrexat_30min_R1	2	ALDQSDNDMSAVYR	14	0	K7EMM8;Q49A26-5;Q49A26-4;Q49A26-2;Q49A26-3;Q49A26	K7EMM8	GLYR1	Putative oxidoreductase GLYR1	1	ALDQS(0.745)DNDMS(0.255)AVYR;ALDQS(0.999)DNDMS(0.001)AVYR	93.90899999999999	0.007757899999999999	36592000.0	3183.8999999999996	2991.9	3761.0	3249.5	3192.4	2651.1	2862.1000000000004	3434.8	3377.8	3664.0	True	False	3043.9395682942168	3486.2606213953777	2971.617497106028	2964.6213801742215	3612.256556160894	3163.3875545730825	3503.9987816329926	3313.9961371368286	3220.7668152673687	3000.414095114079	1.0145064887046809	1.1619264911041642	0.9904024587622943	0.9880707416359152	1.2039193396815289	1.0543169890197464	1.1678383951531752	1.1045129212442348	1.0734407695631465	1.0	11.550945909296699	-5.950847725325648	12.492521039875767	1.0858491280432911	0.7211678010580161	0.0705605025444569	0.07347647009414529	426664.2149791514	3845063.826198753	0.01807072020643379	3472530.2336561633	1.119830455636312e-06	5.950847725325648	-0.364681326985275	
ALDSNS(ph)LENDDLSAPGREPGHFNPESR	ddPTM_K562_Methotrexat_30min_R1	1	ALDSNSLENDDLSAPGREPGHFNPESR	27	1	Q32MZ4-3;Q32MZ4-2;Q32MZ4	Q32MZ4-3	LRRFIP1	Leucine-rich repeat flightless-interacting protein 1	1	ALDS(0.456)NS(0.543)LENDDLSAPGREPGHFNPESR	45.748000000000005	0.034007	18920000.0	1195.6	1012.5	961.79	1081.7	1020.6	1097.3	1064.3	991.59	960.06	1016.8	True	False	1143.042855571018	1179.7984154426345	759.9234226380245	986.8690404475936	1154.8267890044506	1309.337695157875	1302.9963674546634	956.7152176614378	915.4270201508643	832.6476670065495	1.3727809502912196	1.4169239429735343	0.9126590426536884	1.1852180454615158	1.3869333149712253	1.5724990857958845	1.5648832262258825	1.1490036609373127	1.0994170240600263	1.0	9.701562341317352	-9.501605871785634	18.848495596136928	1.074539566901673	1.3365651414594457	0.31277386792595896	0.1807975133856287	45.81536018819193	40599.24832963443	0.11421541272908367	0.05338366907516281	3.150606235586834e-10	9.501605871785634	0.26202557455777264	
ALDVSAS(ph)DDEIAR	ddPTM_K562_Methotrexat_30min_R1	2	ALDVSASDDEIAR	13	0	C9JLK2;H7C393;H7C1U0;C9JIF9;P13798	C9JLK2	APEH	Acylamino-acid-releasing enzyme	1	ALDVS(0.009)AS(0.991)DDEIAR;ALDVS(0.003)AS(0.997)DDEIAR	162.67	4.2148000000000004e-05	19647000.0	1608.67	1125.94	1461.8400000000001	1471.81	1249.3600000000001	1302.02	1385.9699999999998	1559.5500000000002	1921.15	1876.5900000000001	True	False	1537.9547929670696	1311.982447292326	1155.019761225599	1342.7787024324412	1413.6727386935138	1553.616937801381	1696.809053275523	1504.6997425386455	1831.836155826546	1536.7213664711066	1.000802635092395	0.8537542822776869	0.7516130031288373	0.8737945158633206	0.91992782135895	1.0109945574382642	1.1041748298014742	0.9791623747602372	1.1920418338642187	1.0	10.585639888434214	-8.239120198450216	2.0158279863946738	1.0677197068052537	0.8612840932500393	0.572212123161234	0.07845076775387809	0.23912523575216466	1.9094406565581943	0.03118814512884071	0.029078167862898557	5.766068554645209e-09	8.239120198450216	-0.20643561355521445	
ALEAASLSQHPPS(ph)LCISDS(ph)EEEEEER	ddPTM_K562_Methotrexat_30min_R1	1	ALEAASLSQHPPSLCISDSEEEEEER	26	0	E9PPY3;O43159	E9PPY3	RRP8	Ribosomal RNA-processing protein 8	2	ALEAASLS(0.002)QHPPS(0.538)LCIS(0.538)DS(0.923)EEEEEER	79.445	0.0017444000000000003	13714000.0	388.81	421.83	723.58	390.23	543.73	440.32	286.87	776.02	419.46	568.59	True	False	371.71837794794874	491.53023761596677	571.7104463057644	356.0191417711604	615.2400254608959	525.4056082492621	351.20789996403226	748.7269367476766	399.95939615490846	465.6128412502497	0.7983421955241219	1.0556629759096086	1.2278665785304044	0.7646248346913895	1.3213553642740432	1.1284173495697813	0.7542916965541142	1.6080461499670358	0.8589956305349085	1.0	8.862987037008432	-6.277942325701836	4.355965518638515	1.094392773545226	0.780835022870375	0.10189108747659936	0.24966318690543038	0.41527226410928814	18.72356537088331	0.05881308151888933	0.3903420401001926	5.272998821867296e-07	6.277942325701836	-0.3135577506748509	
ALEAASLSQHPPSLCIS(ph)DS(ph)EEEEEER	ddPTM_K562_Methotrexat_30min_R1	3	ALEAASLSQHPPSLCISDSEEEEEER	26	0	E9PPY3;O43159	E9PPY3	RRP8	Ribosomal RNA-processing protein 8	2	ALEAASLS(0.001)QHPPS(0.016)LCIS(0.986)DS(0.997)EEEEEER;ALEAASLS(0.081)QHPPS(0.07)LCIS(0.93)DS(0.919)EEEEEER;ALEAASLSQHPPS(0.089)LCIS(0.98)DS(0.931)EEEEEER	138.95	1.2173e-16	71610000.0	2265.98	2053.3	2734.46	2205.1800000000003	2049.4900000000002	2252.6400000000003	2094.31	2491.4700000000003	2382.88	2825.55	True	False	2166.3702324078426	2392.572924867518	2160.5342146069015	2011.8552931628215	2319.033858315434	2687.9307988885785	2564.012329534884	2403.8435879213616	2272.1004289076627	2313.8155148606947	0.9362761285392586	1.0340378951999398	0.9337538800006613	0.869496846330874	1.0022552979791275	1.1616876028469398	1.1081317041342653	1.0389089244507408	0.9819712999220928	1.0	11.17605812473157	-8.002571062373738	24.997686353479736	1.0657267883486576	0.9475148753590565	0.43910273985372594	0.060786154191057075	100.1295588669093	973548.2643260298	0.020109590735101143	0.022416276936228136	9.940973993076852e-09	8.002571062373738	-0.1182119129896011	
ALEAELDAQHLSETFDNIDNLS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	ALEAELDAQHLSETFDNIDNLSPK	24	0	P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7	P25054-2	APC	Adenomatous polyposis coli protein	1	ALEAELDAQHLSETFDNIDNLS(1)PK	152.23	2.7319000000000003e-27	8058200.0	2723.3	1775.8	3258.2	2440.7	1466.0	1755.8	1518.8	2219.7	2245.9	3412.2	True	False	2603.586992787348	2069.220766561018	2574.3483459374797	2226.7276204312097	1658.8046959440762	2095.083500554266	1859.4295620503087	2141.631892862062	2141.4885992092422	2794.217515105965	0.9317767778320624	0.7405367532679528	0.9213127940184187	0.7969056125348801	0.5936562515181175	0.7497925588211818	0.6654562688831308	0.7664513880125918	0.7664001058013662	1.0	11.44822861598578	-7.524142769422706	24.999326568994253	0.7362514460009322	0.8533028578968512	0.14372523087685474	0.10973271532479728	66.04244079281493	1306134.4672767003	0.0303023965650957	0.03944634342482099	2.9912811249565116e-08	7.524142769422706	0.11705141189591906	
ALEEALSIQTPPSSPPT(ph)AFGSPEGAGALLR	ddPTM_K562_Methotrexat_30min_R1	1	ALEEALSIQTPPSSPPTAFGSPEGAGALLR	30	0	H0YC17;E7EMV7;A0A0A0MRZ4;Q15025-7;Q15025-8;Q15025-5;Q15025-6;Q15025-4;Q15025-3;Q15025-2;Q15025	H0YC17	TNIP1	TNFAIP3-interacting protein 1	1	ALEEALSIQT(0.001)PPS(0.005)S(0.005)PPT(0.566)AFGS(0.423)PEGAGALLR	94.02799999999999	5.4186e-06	3531500.0	1286.0	1177.9	1636.6	1489.4	1198.1	1116.3	1144.1	1235.8	1445.0	1764.2	True	False	1229.4689798129214	1372.5279541233374	1293.1000254623045	1358.8266144426782	1355.671150211868	1332.0091762551126	1400.693548816011	1192.3362135418918	1377.8222653979951	1444.6862845524734	0.851028346402402	0.9500525953622597	0.8950732344377961	0.940568640383824	0.9383844539174954	0.9220058295685521	0.9695485890557268	0.8253253500715879	0.9537172742141793	1.0	10.496540528351566														
ALEEGDGSVSGSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	ALEEGDGSVSGSSPR	15	0	Q8N3X1-2;Q8N3X1	Q8N3X1-2	FNBP4	Formin-binding protein 4	1	ALEEGDGSVSGS(0.017)S(0.983)PR;ALEEGDGSVSGSS(1)PR	278.62	9.322999999999997e-126	121936000.0	3196.8	2884.7	4402.2	3467.6	3250.3999999999996	3171.0	2891.6000000000004	3304.6000000000004	3410.7	3959.3999999999996	True	False	3056.272499740239	3361.3476434838176	3478.2383796224835	3163.600891796315	3677.884572780782	3783.7508715443532	3540.1149075748435	3188.3753449348915	3252.1373014484016	3242.314292629554	0.9426206789045015	1.0367124652674329	1.0727641017187117	0.9757230811916751	1.1343393147115222	1.166990775738674	1.091848164017366	0.9833640594876083	1.0030296288182725	1.0	11.662808229447483	-3.0235352183026203	22.677994667613717	1.0467755214361183	0.005226256092057291	0.0	0.0699619084174366	0.0	0.0	0.017069556132524623	0.0	0.0009472503658843373	3.0235352183026203	-1.041549265344061	
ALEHFTDLYDIKR	ddPTM_K562_Methotrexat_30min_R1	2	ALEHFTDLYDIKR	13	1	A0A087WVQ6;Q00610-2;Q00610	A0A087WVQ6	CLTC	Clathrin heavy chain;Clathrin heavy chain 1	0	;	83.226	0.010686	16709500.0	9860.900000000001	7013.799999999999	10989.0	10611.4	7927.1	7372.4	7144.0	11267.900000000001	10208.0	14135.8	False	True	9427.426643108278	8172.711235784245	8682.55907357037	9681.115037261334	8969.652595646856	8797.011960067359	8746.223855206346	10871.601570293487	9733.432308084934	11575.669641297378	0.8144173888199931	0.7060249202886084	0.7500697015915571	0.8363330448480468	0.7748711628437208	0.7599570679421538	0.7555695805280503	0.9391769035553627	0.8408526339901689	1.0	13.498808033962368	-9.78718584140381	0.803026177549487	0.9934705970830517	0.7652308184275994	0.6586222743848436	0.050585514147549984	0.35256628698354797	0.503701668187491	0.04779059302077761	0.018400837543649375	1.6323532889091962e-10	9.78718584140381	-0.2282397786554523	
ALEIS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	ALEISPR	7	0	Q8IY92-2;Q8IY92	Q8IY92-2	SLX4	Structure-specific endonuclease subunit SLX4	1	ALEIS(1)PR;ALEIS(1)PR;ALEIS(1)PR;ALEIS(1)PR	88.819	0.021058	60599400.0	11513.2	11048.900000000001	14318.5	13581.1	11899.3	11898.0	10533.1	12478.3	12091.4	14081.5	True	False	11007.093513516424	12874.542925811485	11313.242523880004	12390.466049018029	13464.266520086874	14197.120110260093	12895.415801970048	12039.431116232228	11529.273453171849	11531.203897475136	0.9545485112726633	1.11649599124949	0.9810981250931782	1.0745162568611797	1.1676375372249728	1.2311914901937242	1.1183061124080564	1.0440740813600888	0.9998325895266054	1.0	13.493255522742693	-3.025820188844549	18.925785056188616	1.0776783799989031	0.0053601480689404735	0.0	0.0851693609743991	0.0	0.0	0.0205943437770775	0.0	0.0009422796482714239	3.025820188844549	-1.0723182319299627	
ALELPLAASSIPRPRT(ph)PS(ph)PESHR	ddPTM_K562_Methotrexat_30min_R1	2	ALELPLAASSIPRPRTPSPESHR	23	2	Q66K74-2;Q66K74	Q66K74-2	MAP1S	Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain	2	ALELPLAAS(0.177)S(0.177)IPRPRT(0.682)PS(0.891)PES(0.073)HR;ALELPLAAS(0.001)S(0.008)IPRPRT(0.986)PS(0.977)PES(0.029)HR	98.18799999999999	5.0436e-05	58897000.0	5373.4	5219.700000000001	5987.5	5794.7	4353.0	4753.4	4979.200000000001	6240.0	5961.799999999999	6344.6	True	False	5137.191769927489	6082.166705270045	4730.805574028811	5286.687647852151	4925.495799075421	5671.927276190141	6095.912348802272	6020.535663134329	5684.63721927319	5195.531459568996	0.9887711796001045	1.1706534264301425	0.9105527722896827	1.0175451133329712	0.9480254017139612	1.0916933754185496	1.1732990929301328	1.1587911092417431	1.0941396974516189	1.0	12.3430556170193	-8.461205126987586	7.240851321899873	1.1216108121904853	1.0118418237508744	0.27291661755157026	0.07728173027538626	0.3289728127048307	33.75318890643501	0.02707140249150209	0.02368372911130046	3.457760215098349e-09	8.461205126987586	-0.10976898843961092	
ALELPLAASSIPRPRT(ph)PS(ph)PESHRSPAEGSER	ddPTM_K562_Methotrexat_30min_R1	1	ALELPLAASSIPRPRTPSPESHRSPAEGSER	31	3	Q66K74-2;Q66K74	Q66K74-2	MAP1S	Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain	2	ALELPLAAS(0.332)S(0.351)IPRPRT(0.451)PS(0.651)PES(0.141)HRS(0.041)PAEGS(0.034)ER	41.047	0.018591	86023000.0	1900.7	1847.7	2269.2	2035.9	1899.5	1633.8	1646.9	1904.1	2291.6	2389.9	True	False	1817.147503833918	2153.0010194699817	1792.9259304528066	1857.415807938665	2149.3175443013474	1949.5087271930508	2016.2592479198402	1837.131723745845	2185.0640161841147	1957.0659513955068	0.9285060130641901	1.1001167425833356	0.9161295403327321	0.9490818674834207	1.0982346010203456	0.9961384928305216	1.0302459385602847	0.9387173296003942	1.116499939425154	1.0	10.934476658995747														
ALGPAATMAVELHYEEGS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	ALGPAATMAVELHYEEGSPR	20	0	O14523-2;O14523;E9PK05	O14523-2	C2CD2L	C2 domain-containing protein 2-like	1	ALGPAATMAVELHYEEGS(1)PR	94.359	0.0066467	14046000.0	885.24	1019.4	1373.2	996.94	759.66	897.26	948.61	1007.1	1202.9	1189.3	True	False	846.3259095564471	1187.8385231626878	1084.9840858883274	909.539818049204	859.5686052666287	1070.6427962793719	1161.3599399898228	971.6797221702857	1146.9774415551892	973.9062454473728	0.8690014192974802	1.2196641398649652	1.114053935848753	0.9339090105448481	0.8825989249835623	1.0993284017678335	1.192476119152867	0.9977138217487614	1.1777082721430896	1.0	9.927639085554217	-8.432525067089044	24.99998578638223	1.0995492012678008	1.0153616512837296	0.12694853864714983	0.11497228528678433	157.04605247455552	43447.150623016714	0.04170200545548891	0.036777696823527536	3.693813233833805e-09	8.432525067089044	-0.08418754998407119	
ALHSFIT(ph)PPTTPQLR	ddPTM_K562_Methotrexat_30min_R1	1	ALHSFITPPTTPQLR	15	0	A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;J3QR75	A0A2R8Y4X0	KSR1	Kinase suppressor of Ras 1	1	ALHSFIT(1)PPTTPQLR	88.637	0.030936	48562000.0	1425.6	1295.6	1459.8	1257.6	1240.5	1356.0	1115.7	1622.8	1375.0	1816.1	True	False	1362.9323309652411	1509.6758785654094	1153.40792934735	1147.3481605499617	1403.6474933960633	1618.027808834483	1365.9241258753802	1565.7252041882034	1311.0765501191984	1487.18669163119	0.9164500587820196	1.0151219662338107	0.7755636436487059	0.7714889912654588	0.9438273629630868	1.0879789457097566	0.9184617732002394	1.0528101233012448	0.8815816854043868	1.0	10.538370049862948	-7.992262719779262	24.918051674818287	0.9903097710105925	0.8713672287426809	0.3014881618305768	0.08507365573684994	231.78347216486023	746456.4860064783	0.027193013714674044	0.030778214094387742	1.017975393169086e-08	7.992262719779262	-0.11894254226791157	
ALIQTCLNSPDSPPRS(ph)DPTTDQR	ddPTM_K562_Methotrexat_30min_R1	4	ALIQTCLNSPDSPPRSDPTTDQR	23	1	P11831	P11831	SRF	Serum response factor	1	ALIQT(0.001)CLNS(0.01)PDS(0.226)PPRS(0.683)DPT(0.04)T(0.04)DQR;ALIQTCLNS(0.003)PDS(0.036)PPRS(0.951)DPT(0.005)T(0.005)DQR;ALIQTCLNSPDS(0.099)PPRS(0.778)DPT(0.061)T(0.061)DQR;ALIQTCLNS(0.001)PDS(0.146)PPRS(0.827)DPT(0.013)T(0.013)DQR	93.06200000000001	9.478600000000001e-05	311958000.0	4190.1	3848.56	5107.13	4792.030000000001	4115.08	3672.54	3972.3	4404.57	4409.89	5118.799999999999	True	False	4005.908221084079	4484.469125665089	4035.213206060922	4371.920170006544	4656.285148830528	4382.206378360612	4863.189392502261	4249.65877656596	4204.875176440113	4191.735717813849	0.9556681267046372	1.0698358454726034	0.9626592604376881	1.0429856423025323	1.1108250763621517	1.045439568085676	1.160185116593801	1.0138183947298853	1.0031346104599164	1.0	12.033332044805913	-6.253123570821258	23.962615186086783	1.0488301128504787	0.9556680420235429	0.19317403519202148	0.05463872546812353	1001.7750562770806	2886569.8760893317	0.013917895256095101	0.14913682316515758	5.583113145149035e-07	6.253123570821258	-0.09316207082693573	
ALISIHSYSQMLMY(ph)PY(ph)GR	ddPTM_K562_Methotrexat_30min_R1	1	ALISIHSYSQMLMYPYGR	18	0	Q8WXQ8-2;Q8WXQ8-3;Q8WXQ8	Q8WXQ8-2	CPA5	Carboxypeptidase A5	2	ALIS(0.014)IHS(0.014)Y(0.013)S(0.014)QMLMY(0.962)PY(0.983)GR	42.095	0.033529	0.0	302.58	57.01	131.02	184.37	244.82	224.65	197.75	239.02	259.14	222.34	True	False	289.27894549906193	66.42993349568849	103.52069249423877	168.20656835289157	277.01812118760483	268.0604330786628	242.10047135597074	230.61353112217432	247.09263796210135	182.0720714813495	1.5888155890437823	0.3648551529908486	0.568569861659661	0.9238460736144355	1.5214750891433733	1.4722765051097995	1.3296958143345463	1.2666057415939114	1.357114443482411	1.0	7.508365830236249	-7.627449435162247	5.417489170090858	1.343467484057527	0.786312694644345	0.3265857360558644	0.3231004829005646	0.21285893686258067	9.440224580857992	0.09436634259464458	0.1225203940899027	2.3580367258217777e-08	7.627449435162247	-0.557154789413182	
ALKFMNS(ph)S(ph)EREDCNNGEPPRK	ddPTM_K562_Methotrexat_30min_R1	1	ALKFMNSSEREDCNNGEPPRK	21	3	Q9Y297-2	Q9Y297-2			2	ALKFMNS(1)S(1)EREDCNNGEPPRK	47.397	0.033364	16134000.0	842.59	674.28	777.82	926.85	758.92	608.91	596.01	576.51	617.07	863.13	True	False	805.5507524887787	785.6933091996638	614.5662115392216	845.5944995274582	858.7312822959607	726.5732397325994	729.6804143255229	556.2338165310216	588.3825503869484	706.8087930992948	1.1397010908091691	1.1116065856431514	0.869494292571549	1.19635537614013	1.2149414250076023	1.027962932586958	1.032358993619672	0.7869650490509391	0.8324493924402699	1.0	9.465176177714392	-9.07815329258287	3.4512368469297146	0.8583244616676958	1.0920269742778392	0.4659215941499806	0.10452276258918579	0.21807192134095232	4.960791695054835	0.05493495528989127	0.030536707260627127	8.353081281354868e-10	9.07815329258287	0.2337025126101434	
ALLETAS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	ALLETASPR	9	0	Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2	Q96BT3	CENPT	Centromere protein T	1	ALLETAS(1)PR;ALLETAS(1)PR;ALLETAS(1)PR;ALLETAS(1)PR	153.1	4.9953999999999995e-11	157208000.0	11784.0	11287.1	15683.199999999997	13458.2	13518.400000000001	12033.9	11806.1	15183.5	13277.0	15869.0	True	False	11265.989469763188	13152.101427103753	12391.51064360896	12278.340501203482	15296.306549556908	14359.280861897703	14453.918457020109	14649.487698910278	12659.755167950985	12994.970326245997	0.8669499958002382	1.012091686007193	0.9535620576664015	0.9448532926931634	1.1770943807899963	1.1049875837650973	1.1122702164103806	1.1273198269120048	0.9742042382645556	1.0	13.665665718998145	-7.739056995080696	24.998883576475315	1.0916103152579282	0.949858842707106	0.5179483730669208	0.06492357057262625	184.9987608953126	206624.26694207374	0.01862673568085366	0.024028418136268083	1.8236563572066567e-08	7.739056995080696	-0.1417514725508222	
ALLLLLVGGVDQS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	ALLLLLVGGVDQSPR	15	0	P33993-3;P33993	P33993-3	MCM7	DNA replication licensing factor MCM7	1	ALLLLLVGGVDQS(1)PR	115.82	0.0010622	6592000.0	1109.6	807.15	959.27	1155.0	839.22	907.0	695.91	1310.8	1143.7	1675.3	True	False	1060.823312597526	940.5178182958244	757.9323362001861	1053.7429432531849	949.5921397886685	1082.2649134313247	851.9855323455556	1264.698421031487	1090.5296366336927	1371.8869360110855	0.7732585570659257	0.6855651100742202	0.5524743448639864	0.7680975126981384	0.6921795921096193	0.7888878339917215	0.6210318867987756	0.9218678214902599	0.7949121811776483	1.0	10.421945871436982	-9.845536154056276	0.6582376717913316	0.9987468198258636	0.6849127487467929	0.5465582816996566	0.08480717788476706	0.5281010362578504	0.5370407256550739	0.08134586532568272	0.0350252057971634	1.427131019714703e-10	9.845536154056276	-0.3138340710790707	
ALLS(ph)PFSTPVR	ddPTM_K562_Methotrexat_30min_R1	1	ALLSPFSTPVR	11	0	A0A2R8YCL1;Q13322-3;Q13322-2;Q13322-4;Q13322	A0A2R8YCL1	GRB10	Growth factor receptor-bound protein 10	1	ALLS(0.996)PFS(0.004)TPVR	143.0	1.2449e-05	10623000.0	1537.0	1538.0	2371.9	1907.9	1711.5	1440.6	1608.7	1666.6	1762.0	2106.4	True	False	1469.4353203518358	1792.128358469898	1874.070603931345	1740.6373692058464	1936.5922490506753	1718.9755615095557	1969.491925513781	1607.9847333621274	1680.0850045891127	1724.910548566675	0.8518907380866052	1.0389688670865154	1.0864740815044671	1.0091174702666406	1.122720393042931	0.996559249369742	1.1417936583148283	0.9322134035868075	0.9740128298161256	1.0	10.752305832358456	-6.2611184981522365	23.934858274977174	1.0373268204278883	0.8518906598158502	0.4278990089963678	0.06287454015598172	13.550569297513167	1009903.8672524705	0.015385273763978	0.08690919320652042	5.481273868184452e-07	6.2611184981522365	-0.18543616061203805	
ALLSPQY(ph)MVPDMDLWVPAR	ddPTM_K562_Methotrexat_30min_R1	1	ALLSPQYMVPDMDLWVPAR	19	0	Q5SXM2	Q5SXM2	SNAPC4	snRNA-activating protein complex subunit 4	1	ALLS(0.008)PQY(0.992)MVPDMDLWVPAR	83.226	0.0018273	7854200.0	856.72	688.72	1057.9	1162.3	951.68	790.16	893.09	1048.7	1117.1	1054.8	True	False	819.0596146075635	802.5192737616312	835.8612470588859	1060.4029635871657	1076.8426009795764	942.8472370417807	1093.3881666918026	1011.8166265911818	1065.1662648277504	863.76549877902	0.9482430309677212	0.9290939206254896	0.9676946442528923	1.2276514460071668	1.246683969783179	1.0915546388163766	1.265839129066126	1.1714019928110584	1.2331660228770671	1.0	9.754495882176952	-7.218383128543571	6.327292382440718	1.1868424654525507	0.9440888034527919	0.6501010400424552	0.07650991588449294	0.11800343932358781	12.805834702296124	0.019528029506391178	0.03373159986070097	6.048070869494136e-08	7.218383128543571	-0.24275366199975879	
ALNHS(ph)VEDIEPDLLTPR	ddPTM_K562_Methotrexat_30min_R1	1	ALNHSVEDIEPDLLTPR	17	0	I3L2K5;Q8IWR0	I3L2K5	ZC3H7A	Zinc finger CCCH domain-containing protein 7A	1	ALNHS(1)VEDIEPDLLTPR	77.668	0.014247	5149400.0	971.95	981.68	1196.4	1060.6	1125.5	795.15	765.11	1010.4	1150.2	1131.8	True	False	929.2242417800696	1143.8859342930616	945.2919897733728	967.61884468773	1273.5229776842148	948.801483919424	936.7053938769496	974.863659299828	1096.727453052438	926.8200526337654	1.002594019345473	1.2342049905399168	1.0199304461390486	1.0440201870233878	1.3740779281428104	1.0237170432633536	1.0106658689732628	1.0518370384084117	1.1833229653759032	1.0	9.85614544839516														
ALNHSVEDIEPDLLT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	ALNHSVEDIEPDLLTPR	17	0	I3L2K5;Q8IWR0	I3L2K5	ZC3H7A	Zinc finger CCCH domain-containing protein 7A	1	ALNHSVEDIEPDLLT(1)PR	111.11	0.0020062	8478800.0	960.09	1083.8	1131.4	1041.6	1080.0	797.07	1024.1	1053.4	1339.2	1275.3	True	False	917.8855931793067	1262.8795285498534	893.9346014958152	950.2845451883267	1222.038930163441	951.0924967460927	1253.7804941372933	1016.3513249271958	1276.9408843051865	1044.3308120903343	0.8789222558147695	1.2092715391802638	0.8559879600856688	0.9099459042927551	1.170164583880663	0.9107195591044416	1.2005587497966512	0.9732082144477431	1.2227360042640698	1.0	10.028363070672723	-7.750631128665817	24.99967352571772	1.0758324014728053	0.9734030469311589	0.15623274143373211	0.13113128283914746	458.7242633357377	1061032.3881763571	0.03709409297067499	0.047395595330147276	1.7756970424110828e-08	7.750631128665817	-0.10242935454164648	
ALNTLSS(ph)PGQSSFSHGTR	ddPTM_K562_Methotrexat_30min_R1	1	ALNTLSSPGQSSFSHGTR	18	0	Q8WWQ0	Q8WWQ0	PHIP	PH-interacting protein	1	ALNT(0.001)LS(0.093)S(0.395)PGQS(0.395)S(0.115)FSHGTR	252.79	2.3855999999999994e-84	9007600.0	1891.8	1553.7	2109.5	1525.8	1590.2	1721.9	1804.5	1928.3	1557.2	1943.7	True	False	1808.6387371773594	1810.4225166155256	1666.7447780231773	1392.035482957324	1799.3391729128737	2054.632805333403	2209.2050597312214	1860.480596029156	1484.8061118877213	1591.6770951619105	1.1363100861820083	1.1374307779627648	1.0471626331053225	0.8745715366443226	1.1304674662858292	1.290860320588077	1.3879731425716684	1.1688806741545161	0.9328563666593959	1.0	10.636331969501308	-7.992740658602093	24.99636801663006	1.1844385203867303	1.0485035919879846	0.10076717730103368	0.14006331401084524	345.8483158800791	1190861.324028629	0.04608655966609975	0.052151507801210056	1.0168557327366504e-08	7.992740658602093	-0.13593492839874566	
ALNTLSSPGQS(ph)SFSHGTR	ddPTM_K562_Methotrexat_30min_R1	1	ALNTLSSPGQSSFSHGTR	18	0	Q8WWQ0	Q8WWQ0	PHIP	PH-interacting protein	1	ALNTLS(0.008)S(0.074)PGQS(0.743)S(0.174)FS(0.002)HGTR	214.81	1.4968e-27	14592000.0	1974.1	1606.8	2074.7	2156.0	2069.8	1831.5	1453.9	2216.2	1788.1	2077.0	True	False	1887.320927720598	1872.2963890698509	1639.2488224530387	1966.9868274059454	2342.014979307674	2185.411454189053	1779.974084978234	2138.2549898458815	1704.9716212859191	1700.8351734584992	1.109643636945076	1.1008100128025342	0.9637905236400832	1.156482919744804	1.376979389804946	1.2849049033629816	1.0465294419792677	1.2571794276208008	1.002432009810221	1.0	10.732027622044402	-7.500082266639922	24.204312480933336	1.1830068755919996	1.0619846304384608	0.11262068049610952	0.12314863953247851	944.2465976854653	1002559.7465821446	0.03500208057679324	0.05144929592207008	3.1616786994852e-08	7.500082266639922	-0.12102224515353877	
ALNTTDSSS(ph)SPSLADGIDTSGGGSIHVISR	ddPTM_K562_Methotrexat_30min_R1	1	ALNTTDSSSSPSLADGIDTSGGGSIHVISR	30	0	P49116;P49116-2	P49116	NR2C2	Nuclear receptor subfamily 2 group C member 2	1	ALNT(0.01)T(0.023)DS(0.069)S(0.104)S(0.283)S(0.226)PS(0.283)LADGIDT(0.001)SGGGSIHVISR	53.522	0.01517	0.0	505.66	298.95	632.62	662.21	490.33	532.5	398.47	615.07	509.59	602.73	True	False	483.43179186018824	348.34640621884	499.841707263817	604.1550774473518	554.8169894694812	635.3980886462849	487.8370408152401	593.437639475005	485.89927212744925	493.569756426886	0.9794599153722671	0.7057693500927495	1.0127073240514892	1.224052060687489	1.1240903281554042	1.287352153110314	0.98838519674879	1.2023379304499844	0.9844591687404717	1.0	8.947110185579499	-6.975126945671387	6.954379572242105	1.1260282065321057	0.8444430997224032	0.46622510688061525	0.11569614448879575	0.12778297443657924	23.04076143263288	0.028468045277593206	0.058676666801350814	1.058944147160155e-07	6.975126945671387	-0.2815851068097025	
ALPAAHIPAPPHEGS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	ALPAAHIPAPPHEGSPR	17	0	P17029;E9PC66	P17029	ZKSCAN1	Zinc finger protein with KRAB and SCAN domains 1	1	ALPAAHIPAPPHEGS(1)PR	70.197	0.024621	12866000.0	2100.0	1813.6	1868.9	1633.7	1883.2	1690.7	1528.6	1799.4	1872.1	1889.7	True	False	2007.6865144690012	2113.2665740708744	1476.6434300296346	1490.4760574828813	2130.8738085961013	2017.4038469000445	1871.4274615157358	1736.1140820903715	1785.0664796204737	1547.4570184326092	1.2974101965704676	1.3656383013541555	0.954238736482193	0.9631776777829714	1.3770164749095417	1.3036897457374526	1.2093566665982558	1.1219142511944207	1.1535483430929376	1.0	10.595683622918887	-10.148778265908367	1.2046016305854856	1.0025447724558043	1.203372516811083	0.15982858134002187	0.14122473581084014	1.426254874064999	4.3044634384612825	0.1470621521130411	0.0455773518416706	7.099401436335416e-11	10.148778265908367	0.20082774435527861	
ALPHAWS(ph)DPSDPLPVS(ph)VT(ph)GNS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	ALPHAWSDPSDPLPVSVTGNSR	22	0	A0A0G2JP03;A0A0G2JN57;A0A191URG8;A0A0G2JPI1;A0A0G2JPB3;A0A0G2JNJ1;A0A0G2JNI5;A0A191URH1;A0A0G2JMQ2;A0A0G2JM09;A0A0G2JQ37;A0A0G2JLZ2;A0A0C4ZR07;A0A0C4ZQX3;A0A0C4ZNX4;A0A0C4ZN08;A0A0G2JM20;A0A0B4J1R5;Q8N743	A0A0G2JP03	KIR3DL3	Killer cell immunoglobulin-like receptor 3DL3	4	ALPHAWS(0.999)DPS(0.101)DPLPVS(0.955)VT(0.958)GNS(0.987)R	43.611999999999995	0.032938999999999996	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
ALPLS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	ALPLSPR	7	0	J3KTI7;J3QR52;J3QLN7;Q99741	J3KTI7	CDC6	Cell division control protein 6 homolog	1	ALPLS(1)PR;ALPLS(1)PR	88.819	0.021058	344940000.0	8559.3	8001.0	9143.7	8522.900000000001	7802.9	7376.0	7198.7	8563.4	8807.599999999999	8585.2	True	False	8183.043420616435	9323.029256253356	7224.562326053819	7775.71058965591	8829.118118678065	8801.307609117368	8813.191722630727	8262.220368218672	8398.13659842171	7030.337087711077	1.1639617444404295	1.326114116569157	1.027626731964566	1.1060224414057946	1.2558598554415306	1.2519040693655956	1.253594473874667	1.1752239281187395	1.1945567465181044	1.0	12.779378149366742	-10.820514530204823	1.8212457987031745	0.9999814001535352	1.196478516233776	0.34527751089251224	0.08053734214291647	26.563754084092956	56.739850778336255	0.08131026330186765	0.0225978404424356	1.5117691192053438e-11	10.820514530204823	0.1964971160802409	
ALPPVPS(ph)QDDIPLSRPK	ddPTM_K562_Methotrexat_30min_R1	2	ALPPVPSQDDIPLSRPK	17	1	F2Z329;Q96Q45-4;Q96Q45-2;Q96Q45;Q96Q45-5;Q96Q45-3	F2Z329	TMEM237	Transmembrane protein 237	1	ALPPVPS(1)QDDIPLSRPK;ALPPVPS(1)QDDIPLSRPK	92.492	0.0035538	15136100.0	3129.8	2497.7	3530.8999999999996	3621.8999999999996	2441.87	2516.3	2514.0	2342.91	3824.6	3686.7	True	False	2992.217739516703	2910.402471359079	2789.812342603477	3304.3736503625214	2763.0187059242603	3002.539362367411	3077.8284955191434	2260.5085273259715	3646.795180789738	3019.0029051465817	0.9911278105813621	0.9640277147125733	0.9240840205379078	1.0945248329272754	0.9152090252096353	0.9945466952843586	1.0194851055864438	0.7487599708739654	1.2079468935167106	1.0	11.559856429800657	-9.797102521800888	24.99994029875482	1.1039731102122232	0.9622386577047815	0.2697446387794231	0.09670589779543194	266.75183094144245	186987.0930510063	0.08711764027438916	0.02249696101626756	1.5955024602169455e-10	9.797102521800888	-0.14173445250744177	
ALPQT(ph)PRPR	ddPTM_K562_Methotrexat_30min_R1	1	ALPQTPRPR	9	1	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	ALPQT(1)PRPR	106.16	0.031831	17834000.0	700.18	654.36	840.75	802.13	675.73	650.46	585.64	861.87	713.87	878.13	True	False	669.4009255718598	762.4818677817703	664.2880645285552	731.8085082871663	764.6003391475389	776.1521891847178	716.9846778503701	831.5575435874337	680.6823395153399	719.0921477463228	0.9308972816207239	1.060339582585394	0.9237871204830608	1.0176839096083825	1.063285618600956	1.0793501105765437	0.9970692630943647	1.1563991432719494	0.9465856937092673	1.0	9.490032845805704	-7.5152486134542	15.1967989069028	1.0473587660670731	0.9789059386256694	0.18368789122267248	0.06329957937010874	3.3056046202860987	6579.504000086317	0.017044667721368978	0.023270844639697603	3.053172812982172e-08	7.5152486134542	-0.06845282744140369	
ALPQTPRPR	ddPTM_K562_Methotrexat_30min_R1	2	ALPQTPRPR	9	1	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	0	;	119.62	0.0034713	4673200.0	1546.92	1286.3	1658.91	1826.3899999999999	1319.3200000000002	1323.73	1523.74	1591.5	1698.08	1658.24	False	True	1478.9192490297085	1498.839211638381	1310.727461346494	1666.2732243534065	1492.8337049474353	1579.5220880445954	1865.4774828012494	1535.5260429292134	1619.1366314373884	1357.9166673258662	1.0891089892446284	1.1037784922325404	0.9652488204064087	1.2270806187501802	1.0993559036927207	1.1631951547918877	1.373779060002937	1.1307954897947543	1.1923681845852443	1.0	10.407179231605125	-7.2751107450629515	24.954859617659018	1.1802853687371617	1.0578187330766735	0.22942201647518368	0.09655562820572787	1031.8343586444864	1883443.2034472362	0.026838354731767388	0.04005530379385046	5.3074908599320485e-08	7.2751107450629515	-0.12246663566048821	
ALPSLNTGSS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	1	ALPSLNTGSSSPR	13	0	O14545	O14545	TRAFD1	TRAF-type zinc finger domain-containing protein 1	1	ALPSLNT(0.015)GS(0.11)S(0.438)S(0.438)PR	101.43	0.0050742	54970000.0	1940.0	1902.8	1886.3	1946.2	1486.1	1666.6	1403.7	2017.6	1987.6	1842.6	True	False	1854.719922890411	2217.2053579301173	1490.3914078147038	1775.5796676704315	1681.548198255453	1988.6468629819683	1718.5154571043045	1946.639864413434	1895.1969098304883	1508.8872848409403	1.229197131902352	1.469430738932792	0.9877420419589616	1.1767477170155918	1.1144292984301434	1.3179558758039385	1.138928980560309	1.2901161564355281	1.2560228513227023	1.0	10.559269324009424	-6.74751394102222	24.99999981628106	1.174428789215006	1.3493138529699906	0.28472793083527037	0.1181694993954505	310.13144305772295	556762.3038224651	0.029071196809812225	0.0760720540443702	1.788488117020334e-07	6.74751394102222	0.17488506375498458	
ALPSLNTGSSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	5	ALPSLNTGSSSPR	13	0	O14545	O14545	TRAFD1	TRAF-type zinc finger domain-containing protein 1	1	ALPSLNTGS(0.003)S(0.033)S(0.964)PR;ALPSLNTGS(0.002)S(0.029)S(0.969)PR;ALPSLNT(0.005)GS(0.023)S(0.231)S(0.741)PR;ALPSLNT(0.001)GS(0.031)S(0.225)S(0.744)PR;ALPSLNT(0.001)GS(0.064)S(0.215)S(0.721)PR	183.28	1.3432999999999999e-08	4024396000.0	19326.5	17657.5	22404.699999999997	19122.8	17758.5	17077.3	16608.300000000003	21442.5	20610.2	20478.800000000003	True	False	18476.9302008977	20575.101748818084	17702.25964834125	17446.333814062335	20094.05401972913	20377.246533782527	20333.134050171288	20688.355121275305	19652.03630055762	16769.890876370686	1.1017919160662093	1.2269073126652876	1.0555977840788637	1.0403367524975835	1.198222109366394	1.215109071609686	1.2124786142062096	1.2336606883009513	1.1718642921074678	1.0	14.033585680697918	-7.798537282130146	24.9779475372939	1.1877626851440715	1.111171777868237	0.12612907158476483	0.07789165218717152	285.16796416673174	192001.49876288712	0.023721886561964164	0.026898829742495727	1.5902401633552363e-08	7.798537282130146	-0.0765909072758344	
ALPTSKPEGSLHSS(ph)PVGPSSSK	ddPTM_K562_Methotrexat_30min_R1	2	ALPTSKPEGSLHSSPVGPSSSK	22	1	Q9UPT8;M0QY97	Q9UPT8	ZC3H4	Zinc finger CCCH domain-containing protein 4	1	ALPTSKPEGSLHS(0.215)S(0.782)PVGPS(0.001)SSK;ALPTSKPEGSLHS(0.204)S(0.795)PVGPS(0.001)SSK	87.881	0.00063141	89973000.0	11434.2	8047.9	17984.6	11391.0	7686.700000000001	6768.700000000001	5820.3	9463.8	10082.9	14023.599999999999	True	False	10931.566258924495	9377.67868408966	14209.878234100805	10392.368715668423	8697.635781932704	8076.655479098798	7125.650434554518	9130.952789867093	9614.14817977954	11483.790148537606	0.9519127498438803	0.8166013626854591	1.2373857454988717	0.9049598243478727	0.757383726925757	0.7033092188755569	0.6204963990448683	0.7951166532793067	0.837192952450794	1.0	13.487311252055814	-7.620484664696479	4.473401228252916	0.7638621295837692	0.9958497156576409	0.33745321252178917	0.13411681208760867	0.22528400544074545	7.95472158981806	0.0403393112443905	0.052849524401166345	2.396157358583935e-08	7.620484664696479	0.2319875860738717	
ALQS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	ALQSPK	6	0	A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347	A0A494C1K3	GTF2I	General transcription factor II-I	1	ALQS(1)PK;ALQS(1)PK	83.206	0.029283	18585200.0	12923.3	9942.9	19205.0	15481.400000000001	10723.7	9424.6	9427.8	12017.3	11530.4	14499.2	True	False	12355.207205922494	11585.79522459711	15174.132951853579	14124.169698424123	12134.054514253408	11245.77056573855	11542.224140833478	11594.644747529519	10994.354220723211	11873.254379879378	1.0405914680696002	0.9757893542844158	1.2780095891458307	1.1895786316478811	1.0219653454756252	0.9471514890471671	0.9721196709465881	0.9765346868317758	0.9259764735904618	1.0	13.535427801825781	-7.958976844863765	5.5065066703416505	0.9652102268305226	1.1213547581830992	0.4751996178656921	0.07762110628083302	0.1823594725090803	13.59561714905336	0.026692572710215745	0.03000115684929755	1.0990644363279424e-08	7.958976844863765	0.15614453135257655	
ALQTS(ph)PQPPEGPGLPR	ddPTM_K562_Methotrexat_30min_R1	1	ALQTSPQPPEGPGLPR	16	0	A0A2R8YGT1;F8W9A8;B7WPL9;Q6PFW1-7;Q6PFW1-4;Q6PFW1-3;Q6PFW1-2;Q6PFW1;H7C398;Q6PFW1-5	A0A2R8YGT1	PPIP5K1	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1	1	ALQT(0.088)S(0.912)PQPPEGPGLPR	78.902	0.025272	13059000.0	974.3	1048.7	1467.1	934.36	932.36	862.69	946.69	1088.8	892.98	890.7	True	False	931.4709385938796	1221.9798501478429	1159.1757591077528	852.4461094874858	1054.9816823399865	1029.3926330408706	1159.0093311149633	1050.5062868622852	851.4655547094123	729.3855989405321	1.2770624206824022	1.6753550548884264	1.5892495831992184	1.1687180425905106	1.446397740608532	1.4113147209598234	1.589021407604538	1.4402618976686632	1.1673736853952248	1.0	9.510537905020204	-9.895650080246345	3.0297005412129394	1.0049128813790529	1.4572035392369893	0.530900800706757	0.14176981160723476	0.18089874029838604	3.2676408552041147	0.13791724905118427	0.037239411933614894	1.2715982447168465e-10	9.895650080246345	0.45229065785793643	
ALS(ph)GRASPVPAPSSGLHAAVR	ddPTM_K562_Methotrexat_30min_R1	1	ALSGRASPVPAPSSGLHAAVR	21	1	Q9P206;Q9P206-3;Q9P206-2	Q9P206	KIAA1522	Uncharacterized protein KIAA1522	1	ALS(0.718)GRAS(0.282)PVPAPSSGLHAAVR	82.609	0.0018637999999999999	15887000.0	390.18	346.9	608.22	396.81	503.8	347.24	317.01	537.62	412.35	536.53	True	False	373.0281543883402	404.2193287081974	480.56293381808797	362.02228338726945	570.058530570686	414.339215589739	388.10756219750334	518.7115998740833	393.17993850301934	439.3592179180013	0.8490277184942535	0.9200201389279554	1.093781384843453	0.8239778946775951	1.2974771151315128	0.9430534257439164	0.8833490828680799	1.1806093481596003	0.894894023997465	1.0	8.779257152303309	-6.560644397258915	6.004290821186902	1.0170464798432441	0.8649715110341021	0.13499366416758984	0.1369058224444976	0.29253129608629025	28.06112082433083	0.03327800490489666	0.09418851794631393	2.750145065546582e-07	6.560644397258915	-0.15207496880914206	
ALS(ph)HVIQR	ddPTM_K562_Methotrexat_30min_R1	1	ALSHVIQR	8	0	P11308-6	P11308-6			1	ALS(1)HVIQR	85.265	0.027143	11461000.0	1845.0	1452.6	2637.6	2830.4	2071.7	1749.2	1681.6	1825.7	2130.3	2387.3	True	False	1763.8960091406213	1692.6174600216987	2084.0038049366817	2582.263226479493	2344.16486261074	2087.208143962595	2058.7416062311017	1761.48909618339	2031.2628179774035	1954.9368365900232	0.9022777494015446	0.8658169554849222	1.0660210426909693	1.320893431515521	1.1991000521017565	1.0676601437432072	1.0530987844201372	0.901046552100342	1.0390426841209432	1.0	10.932906279913158	-12.424094803925222	17.632595149985466	0.9999971946145464	1.0505443867860538	0.009862177436069097	0.13201723524950146	0.0	0.0	0.1444940395439851	0.03504495219482504	3.7662157574002107e-13	12.424094803925222	0.05054719217150738	
ALS(ph)LGTIPSLTR	ddPTM_K562_Methotrexat_30min_R1	2	ALSLGTIPSLTR	12	0	Q5SNT2;H0Y994;H0Y4R5	Q5SNT2	TMEM201	Transmembrane protein 201	1	ALS(0.999)LGT(0.001)IPSLTR;ALS(0.868)LGT(0.132)IPSLTR	161.87	1.5777999999999997e-07	34865000.0	2918.8999999999996	2474.09	3102.1	2537.71	2118.58	2469.4	2104.7400000000002	2212.84	2489.8	2751.8599999999997	True	False	2790.588650992173	2882.89132016046	2451.011602704763	2315.232904348954	2397.210404320055	2946.5766011326477	2576.781522537377	2135.0131629503494	2374.0497414449333	2253.4714879313956	1.238350991320432	1.2793112030038813	1.0876603568455627	1.027407232240712	1.063785549166458	1.3075721689460988	1.1434719881469493	0.9474329603833654	1.0535077786248026	1.0	11.13793348111864	-3.0000000000000004	0.16992438824306833	0.9880457105173878	2.0282044451399797	0.3306622153849732	0.09549235101072955	81.6334218246565	0.8821276433590645	0.2768596087974743	21.59111617292887	0.000999999999999999	3.0000000000000004	1.040158734622592	
ALS(ph)PEGALRR	ddPTM_K562_Methotrexat_30min_R1	2	ALSPEGALRR	10	1	K7EPS7;I3L2Z9;I3L100;I3L2W2;Q96JN8-2;Q96JN8	K7EPS7	NEURL4	Neuralized-like protein 4	1	ALS(1)PEGALRR;ALS(1)PEGALRR	81.625	0.018699	23084000.0	4909.2	4178.200000000001	6024.700000000001	5556.7	4584.7	4008.9	4202.5	4822.299999999999	4278.9	5664.5	True	False	4693.3974461101025	4868.5765327431245	4760.1978023968895	5069.55273833331	5187.6684102965955	4783.563187932566	5145.0176023942695	4652.69697569434	4079.974872949118	4638.604159872733	1.0118124514075528	1.0495779258035893	1.0262134121242827	1.092904797134576	1.1183684210809932	1.0312505708751423	1.109173670584435	1.0030381587511863	0.8795695283171259	1.0	12.179475022215517	-9.526059820451383	7.367112042275981	0.9395787913331094	1.0625557332631594	0.569223083441424	0.04302517038670499	0.08408913999917274	31.809609965531	0.02682042967737972	0.010839204076913786	2.9781061918275067e-10	9.526059820451383	0.12297694193005004	
ALS(ph)PGLEESGLGLLAR	ddPTM_K562_Methotrexat_30min_R1	4	ALSPGLEESGLGLLAR	16	0	H9KVB4;O15417-2;O15417	H9KVB4	TNRC18	Trinucleotide repeat-containing gene 18 protein	1	ALS(1)PGLEESGLGLLAR;ALS(1)PGLEESGLGLLAR;ALS(1)PGLEESGLGLLAR;ALS(0.999)PGLEES(0.001)GLGLLAR	263.15	4.5586999999999986e-95	106325000.0	3447.6	2948.42	4309.93	4005.8500000000004	3135.08	2947.32	3113.04	3573.8	3904.32	4087.8	True	False	3296.0476320396783	3435.5962904290095	3405.33459167833	3654.663349983354	3547.397971459997	3516.8478772374983	3811.218464475301	3448.1074283508765	3722.8090153901007	3347.459808408114	0.9846414358017685	1.026329362282264	1.0172891644956712	1.091772137428987	1.059728323712709	1.0506019723982696	1.1385404702701203	1.0300668643399262	1.1121295634496309	1.0	11.708851018461592	-7.169926123069296	5.424151692031772	1.071892443426716	1.009600643164124	0.3322330959188352	0.038612008873953045	0.2455419617486021	11.350537081801987	0.009865904183369268	0.017410338767526488	6.761979922425979e-08	7.169926123069296	-0.06229180026259207	
ALS(ph)PLPTR	ddPTM_K562_Methotrexat_30min_R1	1	ALSPLPTR	8	0	Q86UU1-3;Q86UU1-2;Q86UU1	Q86UU1-3	PHLDB1	Pleckstrin homology-like domain family B member 1	1	ALS(0.994)PLPT(0.006)R	94.40899999999999	0.017907	56561000.0	4684.0	4434.5	5986.6	5049.6	4521.1	3955.6	4591.4	4671.7	4820.6	5474.9	True	False	4478.09696846324	5167.22575138801	4730.0944717295815	4606.909408009769	5115.703895520305	4719.9637172755765	5621.138327098886	4507.3936630552325	4596.491358185173	4483.342557134301	0.9988299826292073	1.1525386886097855	1.0550374885369012	1.0275613226740477	1.1410468484902483	1.0527778453521786	1.253782920993628	1.0053645479047009	1.0252375988693567	1.0	12.130359019740652														
ALS(ph)PVIPLIPR	ddPTM_K562_Methotrexat_30min_R1	2	ALSPVIPLIPR	11	0	O14686;O14686-3	O14686	KMT2D	Histone-lysine N-methyltransferase 2D	1	ALS(1)PVIPLIPR;ALS(1)PVIPLIPR	136.81	8.894899999999999e-05	786000000.0	4456.84	3697.36	5089.0	4772.73	4375.46	3764.54	3709.63	4519.22	4681.32	5114.7	True	False	4260.922650069537	4308.285895625658	4020.8884452998086	4354.3121710413625	4950.909682752708	4491.984076305138	4541.608958565107	4360.27647108172	4463.686454984731	4188.378267543663	1.0173203989448685	1.0286286530066244	0.9600108176613948	1.0396176975665128	1.182058870164142	1.0724876764627873	1.0843359096189278	1.0410417093580397	1.0657314525706694	1.0	12.032176027806035	-7.5249157358161085	24.99880539132177	1.07984130367769	1.0038447214096708	0.32693802816543527	0.046172596497353106	70.36109986528881	863490.8204611532	0.01359833602881049	0.01767503486183064	2.985961915332376e-08	7.5249157358161085	-0.07599658226801909	
ALS(ph)PVTSR	ddPTM_K562_Methotrexat_30min_R1	4	ALSPVTSR	8	0	Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR72;A0A0A0MR80;Q96L91-4	Q96L91-3	EP400	E1A-binding protein p400	1	ALS(0.945)PVT(0.049)S(0.006)R;ALS(1)PVTSR;ALS(1)PVTSR;ALS(0.993)PVT(0.007)SR	134.77	7.571100000000001e-05	184499000.0	13146.1	12406.4	16974.0	14913.2	12722.6	12876.400000000001	11996.9	13435.0	14321.999999999998	14762.499999999998	True	False	12568.213184695685	14456.346727256783	13411.389363434651	13605.782910236716	14395.844900830916	15364.582063183148	14687.510213959278	12962.483434969516	13656.17334604158	12088.868198450222	1.0396517670948646	1.1958395517216467	1.1093999159618577	1.1254802920244396	1.1908347964846242	1.2709694415522597	1.2149615640480056	1.0722660899414298	1.129648625649859	1.0	13.561391560371638	-10.102742845255925	1.3237481831033766	1.0033610930265549	1.1625769839181204	0.33657140618384496	0.0650217160193919	0.6678944693576407	2.515785183678424	0.06469667969631836	0.019590275330329966	7.893273563252593e-11	10.102742845255925	0.15921589089156551	
ALS(ph)SAGPIPIRPPIVPVK	ddPTM_K562_Methotrexat_30min_R1	1	ALSSAGPIPIRPPIVPVK	18	1	Q765P7;A0A087WXN9	Q765P7	MTSS1L	MTSS1-like protein	1	ALS(0.963)S(0.037)AGPIPIRPPIVPVK	132.87	4.0355e-07	7627900.0	3087.9	2139.6	3472.4	3057.5	2212.2	1914.6	2184.4	2651.9	2728.3	3805.1	True	False	2952.1596133470593	2493.132533018331	2743.5906931536765	2789.4537220749894	2503.143075284781	2284.5693530932904	2674.3073053349312	2558.63117388877	2601.4619285019703	3115.9595178271247	0.9474319536107808	0.8001171128041116	0.8804962572385681	0.8952150071642073	0.8033297804299834	0.7331832586472131	0.8582612482718729	0.8211374888698808	0.8348830957585954	1.0	11.605460774862236	-5.423930324511819	18.257068340423235	0.8476084933816287	0.8542928656066612	0.0	0.07404132675246583	0.0	0.0	0.016258980528514603	0.0	3.7676423983166133e-06	5.423930324511819	0.006684372225032487	
ALSAAVADSLTNS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	ALSAAVADSLTNSPR	15	0	Q14687-3;Q14687;Q14687-2;H7C3B5	Q14687-3	GSE1	Genetic suppressor element 1	1	ALSAAVADSLTNS(1)PR;ALSAAVADS(0.016)LT(0.226)NS(0.758)PR;ALSAAVADSLT(0.001)NS(0.999)PR;ALSAAVADS(0.023)LT(0.09)NS(0.887)PR	210.08	3.0897e-19	116739400.0	3305.07	2534.52	3538.8399999999997	3617.89	2914.81	2820.94	2747.3900000000003	3843.01	3517.5600000000004	3922.07	True	False	3159.7830801790774	2953.3063505260884	2796.0858451099966	3300.715200836593	3298.158605583053	3366.0467308654474	3363.5621441146955	3707.8491600611947	3354.0294033725745	3211.74511736465	0.9838212450593808	0.9195332265187284	0.8705814885473488	1.027701476991719	1.0269054626256608	1.0480429199274093	1.0472693259278982	1.1544655707622327	1.0443012383637322	1.0	11.64914169043618	-7.426705965366599	4.4955701373235195	1.05843883290876	0.924703518309323	0.6155917459057756	0.04549268566625197	0.1481884698578155	5.056113036858038	0.013592652664836998	0.020343696083633785	3.7436396177862293e-08	7.426705965366599	-0.133735314599437	
ALSAS(ph)HTDLAH	ddPTM_K562_Methotrexat_30min_R1	2	ALSASHTDLAH	11	0	Q07866-4;Q07866-6;Q07866-7;H0YG16;H0YJK1	Q07866-4	KLC1	Kinesin light chain 1	1	ALS(0.001)AS(0.952)HT(0.047)DLAH;ALSAS(0.737)HT(0.263)DLAH	117.86	0.0019003	157655000.0	12390.2	11117.2	12300.3	13969.0	10836.6	10259.4	10512.3	10980.400000000001	12177.7	12684.2	True	False	11845.541643606579	12954.128339909976	9718.635123545151	12744.359458271638	12261.802843156607	12241.883851000362	12869.950872492404	10594.213108250033	11611.561385008417	10386.968467588978	1.1404233757490325	1.2471519847519943	0.9356565540629815	1.2269565945096064	1.1804987067610513	1.17858101612606	1.2390478427513485	1.0199523702519875	1.1178970477517673	1.0	13.342487031390426	-9.27660979569058	24.930641166122427	1.0516935252367408	1.162068966653097	0.27268213166703725	0.08819371971139184	1177.050995828764	1934320.931536603	0.04729788403506515	0.022860744070606683	5.289202619002271e-10	9.27660979569058	0.11037544141635625	
ALSASHT(ph)DLAH	ddPTM_K562_Methotrexat_30min_R1	1	ALSASHTDLAH	11	0	Q07866-4;Q07866-6;Q07866-7;H0YG16;H0YJK1	Q07866-4	KLC1	Kinesin light chain 1	1	ALS(0.001)AS(0.005)HT(0.994)DLAH	182.46	0.00092983	231920000.0	7784.5	5685.7	6250.9	6777.7	5563.8	5099.0	6101.6	5636.2	6627.6	6404.9	True	False	7442.302700897109	6625.165284624381	4938.921513602786	6183.5095640581085	6295.537221891989	6084.309584990433	7470.039120230555	5437.971651371428	6319.484322596366	5244.910545250046	1.4189570320960172	1.2631607779515583	0.9416598187886401	1.1789542473051493	1.2003135549363035	1.160040678005571	1.4242452861270731	1.0368092276228094	1.2048793336083659	1.0	12.356702451740189	-15.727491743944341	0.24580967742108956	1.6996817434310798e-10	1.215690023557584	0.16649589094062933	0.1398739177598224	311.7273896913887	3.515207495774297	155.733943651299	0.21687956704306222	1.8728726864958632e-16	15.727491743944341	1.2156900233876158	
ALSGGGSVASPPPS(ph)PAMPK	ddPTM_K562_Methotrexat_30min_R1	1	ALSGGGSVASPPPSPAMPK	19	0	O75420	O75420	GIGYF1	PERQ amino acid-rich with GYF domain-containing protein 1	1	ALSGGGS(0.016)VAS(0.453)PPPS(0.531)PAMPK	143.97	1.5824999999999998e-11	7912400.0	1422.9	873.3	2178.2	1517.6	1223.9	1215.5	898.58	1371.9	1162.5	1460.1	True	False	1360.3510197323528	1017.5979814380764	1721.0255868642269	1384.5543642260025	1384.86430243244	1450.378172299641	1100.1094389433533	1323.649499399677	1108.455628737141	1195.6617413417212	1.1377390215779792	0.8510751379367303	1.4393917003089558	1.1579816568123305	1.1582408757834834	1.2130338557726934	0.9200841683776357	1.1070434501938093	0.927064562167289	1.0	10.22359358631205	-8.756543969632737	24.99983847323781	0.9974683284508769	1.158139828861279	0.2591186051647626	0.14134322868541202	188.6610454852482	963458.7384770421	0.05555647422461749	0.04163978832797684	1.7516850779403242e-09	8.756543969632737	0.16067150041040212	
ALSGRAS(ph)PVPAPSSGLHAAVR	ddPTM_K562_Methotrexat_30min_R1	2	ALSGRASPVPAPSSGLHAAVR	21	1	Q9P206;Q9P206-3;Q9P206-2	Q9P206	KIAA1522	Uncharacterized protein KIAA1522	1	ALS(0.084)GRAS(0.915)PVPAPSSGLHAAVR;ALS(0.484)GRAS(0.516)PVPAPSSGLHAAVR	83.666	0.0016855999999999998	29324000.0	1609.94	1595.77	2241.0	1666.19	1980.9499999999998	1370.73	1346.23	2358.63	1779.56	2303.39	True	False	1539.168965287726	1859.4438690477962	1770.6447250770048	1520.11770962686	2241.479646951172	1635.604172864079	1648.1563466677542	2275.675646015789	1696.8286440219065	1886.223750694548	0.8160055055615597	0.9858023833933324	0.9387246472880089	0.8059052957355245	1.1883423936984205	0.8671315755947906	0.8737862335053663	1.2064717376068648	0.8995903287704323	1.0	10.881285108538602	-3.648304735740337	0.33126602466243293	1.008350284828745	7.282246414429601e-13	0.11060415430795756	0.1264427848662362	90.7196206940176	1.930109615835071	0.1136955973770919	52.0138789246105	0.00022474770427975983	3.648304735740337	-1.0083502848280166	
ALSPLEEWLR	ddPTM_K562_Methotrexat_30min_R1	1	ALSPLEEWLR	10	0	A0A140T936;P26640;A0A140T904;A2ABF4;A0A0G2JJT9;A0A140T954	A0A140T936	VARS	Valine--tRNA ligase	0		106.68	0.0054081	0.0	1027.8	840.91	846.32	906.49	786.78	729.69	796.23	1284.7	1060.8	1287.0	False	True	982.6191426529707	979.8560844739411	668.688997647109	827.0194291165192	890.2553606240656	870.6922653602019	974.8048460569644	1239.5163728251089	1011.4836395392342	1053.911828715016	0.9323542215585823	0.9297325049180181	0.6344828660500084	0.784714059168369	0.844715218453816	0.8261528541925514	0.9249396576613975	1.1761101252050576	0.9597421833404104	1.0	10.041538459420456	-8.989155794099592	4.079543490806078	1.0528497287470833	0.8219314870173244	0.5221971152033248	0.09392681872338478	0.16686247409824856	6.425887099973156	0.045282417890176875	0.02777999091785104	1.0252840609718134e-09	8.989155794099592	-0.23091824172975883	
ALSQTVPSSGTNGVSLPADCT(ph)GAVPAASPDTAAWR	ddPTM_K562_Methotrexat_30min_R1	1	ALSQTVPSSGTNGVSLPADCTGAVPAASPDTAAWR	35	0	B7Z7F3;Q9H6Z4-3;Q9H6Z4-2;Q9H6Z4;K7EN31	B7Z7F3	RANBP3	Ran-binding protein 3	1	ALSQTVPS(0.004)S(0.012)GT(0.012)NGVS(0.131)LPADCT(0.723)GAVPAAS(0.103)PDT(0.015)AAWR	74.81	9.7172e-08	13489000.0	1215.4	1292.4	1858.7	1727.5	1348.7	1251.1	1381.6	1481.3	2020.6	1856.0	True	False	1161.9724712788686	1505.9471329561095	1468.5842706383887	1576.052757116776	1526.0776899179925	1492.8573684607827	1691.458969534308	1429.201839391168	1926.662747033347	1519.8604149922855	0.7645257813262848	0.9908456843148674	0.966262596322599	1.0369720413599797	1.004090688108183	0.9822332062437195	1.1129041541245046	0.9403507225355444	1.2676576927909042	1.0	10.569723116327328	-5.412979778028051	0.8157320697964154	1.0490816174234858	6.423674234596677e-31	0.4747996654646164	0.08753127846023481	7.465223300153267	1.3905548980735873	0.029327887671131325	9.793002916770762	3.863849678055073e-06	5.412979778028051	-1.0490816174234858	
ALSSGGS(ph)ITSPPLSPALPK	ddPTM_K562_Methotrexat_30min_R1	1	ALSSGGSITSPPLSPALPK	19	0	I1E4Y6;Q6Y7W6;Q6Y7W6-4;Q6Y7W6-5;C9JHW1;E7ESB6;C9JW88;F8WCD5;C9JPV7;C9JXQ0;C9J0V6;C9JHT0;C9JRZ2;Q6Y7W6-3	I1E4Y6;Q6Y7W6-3	GIGYF2	PERQ amino acid-rich with GYF domain-containing protein 2	1	ALS(0.002)S(0.005)GGS(0.92)IT(0.07)S(0.003)PPLSPALPK	124.51	4.1627e-05	169860000.0	6413.6	4837.0	8309.7	6838.7	4617.3	4274.8	4644.5	6332.0	6049.6	7541.0	True	False	6131.665823427803	5636.232035057798	6565.607528769474	6239.161788766712	5224.555881707084	5100.844599709179	5686.147353794219	6109.2999709882315	5768.355416437166	6175.2518262159565	0.9929418258534629	0.9127129052664956	1.0632129204668757	1.0103493694426253	0.8460474210180614	0.8260140223034196	0.9207960280509809	0.989319973163242	0.9341085317279885	1.0	12.592282255533489	-7.734537757851176	24.999637000879826	0.9142493663769177	0.9938269522761175	0.26441648128713724	0.061262292288165494	319.1905696510171	296622.0372852436	0.019421609380059428	0.025066647649949748	1.8427322736362726e-08	7.734537757851176	0.07957758589919983	
ALSSGGSIT(ph)SPPLSPALPK	ddPTM_K562_Methotrexat_30min_R1	1	ALSSGGSITSPPLSPALPK	19	0	I1E4Y6;Q6Y7W6;Q6Y7W6-4;Q6Y7W6-5;C9JHW1;E7ESB6;C9JW88;F8WCD5;C9JPV7;C9JXQ0;C9J0V6;C9JHT0;C9JRZ2;Q6Y7W6-3	I1E4Y6;Q6Y7W6-3	GIGYF2	PERQ amino acid-rich with GYF domain-containing protein 2	1	ALSS(0.001)GGS(0.173)IT(0.759)S(0.066)PPLS(0.001)PALPK	117.53	0.00049491	195740000.0	3610.8	2414.6	4726.5	3799.5	2743.8	2484.0	2370.3	3341.1	3778.7	4294.7	True	False	3452.073555449841	2813.571608817567	3734.472241444203	3466.4037341043086	3104.6577931318943	2963.9978445021075	2901.9001125413765	3223.5916192464915	3603.029061771211	3516.888213506126	0.9815704525928993	0.8000173556874602	1.0618683377829514	0.9856451282108034	0.8827854639248648	0.8427898939520685	0.825132883495423	0.9166033787672667	1.0244934848751444	1.0	11.780083763388907	-9.742470301942936	9.11190020366121	1.012337533191214	0.9095018450254818	0.21396341616142123	0.07669738693696034	0.30934965076504534	136.77917773816796	0.057577695010816235	0.020484828690103787	1.8093796355708253e-10	9.742470301942936	-0.10283568816573208	
ALSSGGSITS(ph)PPLS(ph)PALPK	ddPTM_K562_Methotrexat_30min_R1	1	ALSSGGSITSPPLSPALPK	19	0	I1E4Y6;Q6Y7W6;Q6Y7W6-4;Q6Y7W6-5;C9JHW1;E7ESB6;C9JW88;F8WCD5;C9JPV7;C9JXQ0;C9J0V6;C9JHT0;C9JRZ2;Q6Y7W6-3	I1E4Y6;Q6Y7W6-3	GIGYF2	PERQ amino acid-rich with GYF domain-containing protein 2	2	ALSS(0.001)GGS(0.013)IT(0.159)S(0.831)PPLS(0.996)PALPK	84.40299999999999	0.0086236	8337700.0	1796.9	1324.9	2932.0	1532.2	1332.0	1251.1	1288.2	2233.0	1865.4	2739.2	True	False	1717.910427547308	1543.8172055505638	2316.6132681507243	1397.874404893966	1507.1813472015754	1492.8573684607827	1577.1116419760385	2154.4641243235505	1778.6779611580753	2243.1043366093036	0.7658629157411896	0.6882502879398876	1.0327710710294187	0.6231874202548265	0.6719176288874035	0.6655318453520531	0.7030933052182559	0.9604832415331414	0.792953734754372	1.0	11.13128101271354	-9.257329374918685	24.903526254766895	0.9075388690829619	0.7359039078032117	0.33316429535706715	0.11773209615731255	417.90441102843806	2532204.941798923	0.058710095211652796	0.032302355450682184	5.529305999698811e-10	9.257329374918685	-0.1716349612797502	
ALSSLHGDDQDS(ph)EDEVLTIPEVK	ddPTM_K562_Methotrexat_30min_R1	8	ALSSLHGDDQDSEDEVLTIPEVK	23	0	P11717	P11717	IGF2R	Cation-independent mannose-6-phosphate receptor	1	ALSSLHGDDQDS(1)EDEVLTIPEVK;ALSSLHGDDQDS(1)EDEVLTIPEVK;ALSSLHGDDQDS(0.999)EDEVLT(0.001)IPEVK;ALSSLHGDDQDS(0.999)EDEVLT(0.001)IPEVK;ALSSLHGDDQDS(0.979)EDEVLT(0.021)IPEVK;ALS(0.001)S(0.003)LHGDDQDS(0.99)EDEVLT(0.007)IPEVK;ALSSLHGDDQDS(1)EDEVLTIPEVK;ALSSLHGDDQDS(0.984)EDEVLT(0.016)IPEVK	149.82	1.2182e-17	885718000.0	39071.799999999996	28308.650000000005	52154.899999999994	44847.200000000004	28417.939999999995	25977.100000000002	26102.36	34734.50000000001	34868.8	47308.899999999994	True	False	37354.250455252346	32986.17324772357	41208.299228879376	40915.5156057699	32155.3972176378	30996.80692689842	31956.478682696525	33512.86794729799	33247.75709876096	38740.79977738603	0.9642095844664763	0.8514582413700819	1.0636925274044984	1.0561350266613057	0.8300137684924023	0.8001075637316096	0.8248791678624641	0.865053590526551	0.8582103954954616	1.0	15.241566117253097	-7.777213059093809	24.996959921311795	0.8512416669113676	0.9801169290417725	0.3800661410237869	0.074631382343156	244.31778698331775	387175.0414901063	0.02366826926023029	0.026924969474644737	1.6702710005542167e-08	7.777213059093809	0.1288752621304049	
ALSYAS(ph)LDKEDLLSPINQNTLQR	ddPTM_K562_Methotrexat_30min_R1	1	ALSYASLDKEDLLSPINQNTLQR	23	1	Q6R327-3;Q6R327	Q6R327-3	RICTOR	Rapamycin-insensitive companion of mTOR	1	ALS(0.049)Y(0.13)AS(0.819)LDKEDLLS(0.001)PINQNTLQR	52.522	0.022665	8778500.0	853.19	554.47	1026.8	966.59	609.73	607.5	701.74	845.64	1086.6	1247.1	True	False	815.6847891808609	646.0867431214594	811.2887120522391	881.8505554277893	689.9201823042174	724.8907771880154	859.1230582520298	815.8983618866848	1036.0842031705618	1021.2381053539217	0.7987214586927072	0.6326504462909271	0.794416804268264	0.8635112133053182	0.6755723064848992	0.7098156378886745	0.8412563669021055	0.7989305898490009	1.0145373520032284	1.0	9.996103559657922	-9.65382134728561	1.850514584586482	1.020016190991508	0.7520842678013698	0.6552723325977369	0.06990178028811261	0.2108647258661828	1.328906949727266	0.06479021034833075	0.019750051156152054	2.2191090916116768e-10	9.65382134728561	-0.26793192319013814	
ALT(ph)IDHLAVNDVMLES(ph)LR	ddPTM_K562_Methotrexat_30min_R1	1	ALTIDHLAVNDVMLESLR	18	0	S4R407;Q5T2K3;Q9H8W5-2;Q9H8W5	S4R407	TRIM45	Tripartite motif-containing protein 45	2	ALT(1)IDHLAVNDVMLES(1)LR	80.031	0.015679	7019700.0	969.88	860.92	1334.8	1221.8	777.44	1023.1	1006.7	787.27	688.35	893.47	True	False	927.2452365015214	1003.172396862097	1054.6437211212788	1114.6866909668752	879.686986913208	1220.799595293923	1232.478101208879	759.5812678711158	656.3487587451276	731.6539250986834	1.267327632222375	1.3711023237205922	1.4414516001933992	1.523516313831747	1.2023266147237006	1.6685478658906463	1.6845096553574093	1.0381701536948162	0.8970754290105136	1.0	9.51501759975122	-9.395717542135907	5.917692379739606	0.9556404630522953	1.448302623887004	0.6869860684379674	0.14689058718182754	0.13741047926927255	5.980048997054811	0.08657232490811266	0.040502668710361955	4.020522138661143e-10	9.395717542135907	0.4926621608347087	
ALTQPS(ph)PVSTPSSVQFFLQEDDSADR	ddPTM_K562_Methotrexat_30min_R1	1	ALTQPSPVSTPSSVQFFLQEDDSADR	26	0	P04920-2;P04920-3;P04920;C9J9M9	P04920-2	SLC4A2	Anion exchange protein 2	1	ALT(0.003)QPS(0.896)PVS(0.042)T(0.042)PS(0.015)S(0.001)VQFFLQEDDSADR	90.694	4.6418e-05	4488700.0	2106.8	1562.3	1889.3	2102.8	1697.3	1527.5	2016.3	2104.2	2195.8	1871.9	True	False	2014.1875946110904	1820.44352044052	1492.7617488121302	1918.4507888076175	1920.5247001540793	1822.6677566332396	2468.5066012391603	2030.194093328086	2093.717737273992	1532.880770918134	1.3139884280788994	1.1875962925349683	0.9738276956256852	1.2515329471179566	1.2528858973185253	1.189047309623132	1.6103709095134804	1.324430530961701	1.3658712256008922	1.0	10.582029771681889	-8.61320660575855	24.999996473709032	1.3589929571017458	1.1895750517434442	0.1204403854359426	0.1622305100060353	31.412528338711613	8684.335584362478	0.06008048211689366	0.04653813953061863	2.4366513609279466e-09	8.61320660575855	-0.1694179053583016	
ALVEFESNPEETREPGS(ph)PPSVQR	ddPTM_K562_Methotrexat_30min_R1	3	ALVEFESNPEETREPGSPPSVQR	23	1	Q9H6F5;H0YG79	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	1	ALVEFES(0.007)NPEET(0.058)REPGS(0.788)PPS(0.146)VQR;ALVEFESNPEET(0.001)REPGS(0.741)PPS(0.258)VQR;ALVEFES(0.022)NPEET(0.264)REPGS(0.658)PPS(0.055)VQR	69.081	0.0030813000000000004	1523141200.0	3018.04	2667.51	3193.5299999999997	3167.74	2681.3199999999997	2307.14	2419.66	3048.67	2634.6800000000003	3382.3100000000004	True	False	2885.37057529906	3108.2706875825975	2523.2516951696407	2890.0291524336326	3033.960577986886	2752.962152562234	2962.3303490325566	2941.446548097395	2512.1943018676748	2769.7408837459875	1.0417474761742647	1.1222243589005911	0.9110064085695345	1.043429430310087	1.0953950948232927	0.9939421296474995	1.0695333871903923	1.0619934035559244	0.9070141963857684	1.0	11.435535299485178	-9.750773512560727	24.999734233229802	0.9535070872308138	1.0417782018153567	0.26965828962100835	0.05851566554310169	243.2766619396309	570225.5536107856	0.03962291917106847	0.014635589313721104	1.775114973720956e-10	9.750773512560727	0.08827111458454295	
ALVGPGS(ph)PPR	ddPTM_K562_Methotrexat_30min_R1	1	ALVGPGSPPR	10	0	Q12809-7;Q12809-4;Q12809;Q86U57;Q12809-5	Q12809-7	KCNH2	Potassium voltage-gated channel subfamily H member 2	1	ALVGPGS(1)PPR	108.43	0.0033563000000000004	13024000.0	2243.4	1892.1	2598.1	2361.4	2122.0	1951.2	2169.6	2238.6	2169.2	2153.3	True	False	2144.782822171312	2204.73736479902	2052.794315137244	2154.3797283100193	2401.0801942655753	2328.241785101654	2656.1880285912234	2159.8671691494424	2068.354365468049	1763.3165040963827	1.2163345702196628	1.2503355805252017	1.1641666770363528	1.2217771020149546	1.3616841835754363	1.3203765629669355	1.5063591944047479	1.2248891019461496	1.1729909863958223	1.0	10.784075737146459	-10.020665149194814	2.2435962622281034	1.002937437071603	1.2883802693315716	0.4828602994059884	0.09128387106644527	0.2987346493661688	3.4859257223552595	0.09570384178917087	0.02638434942157174	9.535310745575903e-11	10.020665149194814	0.28544283225996847	
ALVHERDEAAYGELR	ddPTM_K562_Methotrexat_30min_R1	2	ALVHERDEAAYGELR	15	1	H0YM70;A0A087X1Z3;Q9UL46	H0YM70	PSME2	Proteasome activator complex subunit 2	0	;	118.08	0.0027214	57459000.0	5690.3	5112.5	6566.1	6741.8	5457.5	5388.5	5478.4	6484.3	6222.700000000001	7002.2	False	True	5440.1612253728335	5957.253727358483	5187.96534106565	6150.756861319761	6175.256908673125	6429.751362761515	6707.0706562657415	6256.243493663773	5933.408035219449	5734.033727294707	0.9487494291282236	1.0389289653113167	0.9047671478404976	1.072675389410669	1.0769481315183307	1.121331277169701	1.169695013187533	1.091071973274814	1.034770340986258	1.0	12.485334675124324	-7.405766792735606	6.2075296109489075	1.0915954515170312	0.9721252866691581	0.49600172816986576	0.05330256680893638	0.19152808546294106	9.063248465530963	0.015064959100751684	0.022430185558141975	3.928558343275381e-08	7.405766792735606	-0.1194701648478731	
ALVLPS(ph)PRPYVR	ddPTM_K562_Methotrexat_30min_R1	1	ALVLPSPRPYVR	12	1	P18858-3;P18858;F5GZ28	P18858-3	LIG1	DNA ligase 1;DNA ligase	1	ALVLPS(0.947)PRPY(0.053)VR	91.62	0.011659000000000001	8152200.0	1477.1	1271.6	1807.9	1367.6	1474.3	1175.1	1268.3	1391.3	1508.3	1730.1	True	False	1412.1684526296012	1481.710286495657	1428.4464964153124	1247.704631335978	1668.1962914258893	1402.1714440718288	1552.7485604084832	1342.367190403652	1438.179462214392	1416.7621249882286	0.9967576262255984	1.0458426720773384	1.0082472358774983	0.8806733391085994	1.1774709826039074	0.9897013897682216	1.0959839573784373	0.9474894668113784	1.0151171017691776	1.0	10.46838183409067	-5.93718515147306	12.32437687169208	1.0183461929699142	0.8684323413081212	0.006884227596857584	0.07572872100576467	2196391.0014536367	14398454.051969139	0.01815896163847248	7731321.832689733	1.1556194653525067e-06	5.93718515147306	-0.14991385166179305	
ALVVPEPEPDS(ph)DSNQER	ddPTM_K562_Methotrexat_30min_R1	3	ALVVPEPEPDSDSNQER	17	0	C9J0A5;C9JXC9;Q5VTR2	C9J0A5	RNF20	E3 ubiquitin-protein ligase BRE1A	1	ALVVPEPEPDS(0.545)DS(0.455)NQER;ALVVPEPEPDS(0.846)DS(0.154)NQER;ALVVPEPEPDS(0.952)DS(0.048)NQER	186.96	9.8248e-09	66056000.0	10778.1	9388.8	11611.4	11074.5	9738.199999999999	9179.6	9333.7	11079.2	10744.2	11801.199999999999	True	False	10304.307629332538	10940.13961768672	9174.325819169628	10103.615779270476	11018.943990479265	10953.427783168892	11427.019820456257	10689.538256249658	10244.70448712051	9663.888324033922	1.0662693197422308	1.1320639530238346	0.949341042813299	1.0455021250755723	1.1402184732490486	1.133438986037112	1.1824453509088528	1.1061322210921005	1.0601017047808912	1.0	13.238388067626676	-5.9260845146185535	13.873403780719606	1.0883278996128964	0.8326641603655849	0.0006000838190738378	0.06750222414994139	1999195.7407680992	8963706.67419904	0.01780757373710412	14564122.431894913	1.1855380175287403e-06	5.9260845146185535	-0.25566373924731156	
ALYETELADARR	ddPTM_K562_Methotrexat_30min_R1	2	ALYETELADARR	12	1	P20700;E9PBF6;A0A0D9SFY5;A0A0D9SFE5	P20700	LMNB1	Lamin-B1	0	;	177.57	0.0018285999999999999	47705000.0	6073.8	6150.9	7074.3	7069.200000000001	6296.4	5980.1	5466.9	6520.2	6608.9	7371.799999999999	False	True	5806.803024562767	7167.231677576393	5589.501106029562	6449.454211641057	7124.486962852851	7135.669689978681	6692.991488525698	6290.880870315459	6301.6536815147465	6036.695585797479	0.9619174831714921	1.1872773068827132	0.9259206508905252	1.0683749279679886	1.1801964935277864	1.1820489518747237	1.1087177402604638	1.0421066924620153	1.04389124678419	1.0	12.559543336444923	-3.022004889847817	19.23228277166395	1.0776665901481108	0.005378462177314303	0.0	0.08907027667757424	0.0	0.0	0.02040664790732411	0.0	0.0009505940905808324	3.022004889847817	-1.0722881279707965	
AMDNHS(ph)DS(ph)EEELAAFCPQLDDSTVAR	ddPTM_K562_Methotrexat_30min_R1	4	AMDNHSDSEEELAAFCPQLDDSTVAR	26	0	K7EQI9;Q86VR2-2;Q86VR2	K7EQI9	FAM134C	Protein FAM134C	2	AMDNHS(1)DS(1)EEELAAFCPQLDDSTVAR;AMDNHS(1)DS(1)EEELAAFCPQLDDSTVAR;AMDNHS(1)DS(1)EEELAAFCPQLDDSTVAR;AMDNHS(1)DS(1)EEELAAFCPQLDDSTVAR	130.07	7.902199999999999e-13	285765000.0	4547.129999999999	3834.9300000000003	5282.05	5191.8	4078.8899999999994	3779.1200000000003	4025.0	4690.36	4247.54	5109.21	True	False	4347.24360977973	4468.586999835481	4173.419888484153	4736.642954789512	4615.3355294947705	4509.381454957648	4927.708709015333	4525.397380278647	4050.0727925042193	4183.8825597428495	1.0390453239793904	1.0680479043154907	0.9974992913617202	1.132116613493242	1.1031226291826028	1.0777982867747617	1.1777837065575283	1.081626292243917	0.9680178003737145	1.0	12.030626640822826	-5.962996157788867	17.399658206932724	1.073384753672913	0.8878082221929497	0.010289003421194987	0.061314695191473575	5593.618805151749	17361.271369020975	0.015007423700083674	34116.39289739072	1.0889397271602716e-06	5.962996157788867	-0.18557653147996334	
AMGDS(ph)DDEYDR	ddPTM_K562_Methotrexat_30min_R1	1	AMGDSDDEYDR	11	0	C9JUL9	C9JUL9	SRRT		1	AMGDS(1)DDEYDR	76.868	0.031529	5782700.0	2398.7	2462.6	3309.5	2480.1	2252.4	2019.9	1956.5	2320.1	2292.5	2881.7	True	False	2293.256020122283	2869.502792957068	2614.88117699346	2262.673483603657	2548.6300799075307	2410.217087805878	2395.294928990932	2238.5007679548016	2185.9221753805564	2359.7962057560694	0.9718025711408977	1.2159960194688466	1.1080961867025556	0.9588427501004076	1.0800212635696478	1.021366625612339	1.0150431309060814	0.948599189410763	0.9263182007194539	1.0	11.204446557113469	-8.269139673424228	0.6954944950494494	0.9552781316116572	1.097722347476093	0.29885387131742935	0.07002201192583435	0.855775880917724	0.9057692015368889	0.052739876844389307	0.05343322661720194	5.380966974358333e-09	8.269139673424228	0.1424442158644359	
AMLDQLMGTS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	AMLDQLMGTSR	11	0	Q9Y383;V9GZ75;F8WEU3	Q9Y383	LUC7L2;C7orf55-LUC7L2	Putative RNA-binding protein Luc7-like 2	1	AMLDQLMGT(0.058)S(0.942)R	69.26100000000001	0.032763	52051000.0	4131.3	3356.9	3822.8	4216.8	3108.0	3184.9	3014.8	4063.8	4508.3	4122.1	True	False	3949.6929986789432	3911.5706674561757	3020.446521652999	3847.1196910043554	3516.7564768036796	3800.3368498207583	3690.9456437116587	3920.8738506162335	4298.710117019917	3375.5477460343195	1.1700895071975044	1.1587958345579883	0.8948018955446556	1.1397023477223958	1.0418328346666865	1.1258430144516522	1.0934360647239776	1.16155188597838	1.2734852060884496	1.0	11.72090591019416	-9.236582171168124	4.721653947975883	1.1637307331165088	1.0853939163791635	0.054627753886802966	0.09707342259441264	0.44562807506927743	26.57567097987587	0.04923171912644972	0.02599495476082751	5.799864251670966e-10	9.236582171168124	-0.07833681673734527	
AMLDQLMGTS(ph)RDGDTTR	ddPTM_K562_Methotrexat_30min_R1	1	AMLDQLMGTSRDGDTTR	17	1	Q9Y383	Q9Y383	LUC7L2	Putative RNA-binding protein Luc7-like 2	1	AMLDQLMGT(0.177)S(0.822)RDGDTTR	88.10799999999999	0.004654999999999999	0.0	2238.7	1715.3	2098.9	2659.7	1863.0	1791.6	1730.9	1742.1	2410.8	2228.0	True	False	2140.2894285436914	1998.7241698851844	1658.369573165606	2426.5282304506454	2108.0171545319354	2137.8013438848534	2119.0983861949435	1680.8293555683204	2298.72243420172	1824.4876102385833	1.1730906894258446	1.0954988998932236	0.908950854946472	1.3299779164481884	1.1554022853881016	1.171726972486976	1.1614758983854292	0.9212610412566862	1.259927675749534	1.0	10.833275638539787	-12.293969154825179	5.406763684988568	0.9999808468476697	1.1257714873748985	0.0886598169812306	0.124881579897193	2.825074254377899e-05	3.6891690954207314e-06	0.11847747568761652	0.028730634637976173	5.081955351754354e-13	12.293969154825179	0.12579064052722877	
AMLDSGIYPPGS(ph)PGK	ddPTM_K562_Methotrexat_30min_R1	3	AMLDSGIYPPGSPGK	15	0	O95295	O95295	SNAPIN	SNARE-associated protein Snapin	1	AMLDSGIYPPGS(1)PGK;AMLDSGIYPPGS(1)PGK;AMLDS(0.016)GIY(0.003)PPGS(0.981)PGK	109.14	0.0012134000000000001	33310800.0	7771.699999999999	5100.0	8439.8	7819.3	5372.200000000001	4445.2	5039.0	6978.4	7125.4	10064.099999999999	True	False	7430.0653735708265	5942.688314822159	6668.401316691168	7133.794109246433	6078.738463540769	5304.17198807599	6169.124021050504	6732.965716605229	6794.141709250431	8241.39396687707	0.9015544461814289	0.7210780529005621	0.8091351224673997	0.8656052772040526	0.7375862005835159	0.6436013142186808	0.7485534663000928	0.8169692825832189	0.8243922977783514	1.0	13.00867266321292	-10.266444023738472	1.5301270064963952	0.9994315425213722	0.7736645070377399	0.47056119404516394	0.06992261482669423	0.8894451387095913	3.5160582296103366	0.06999944421433801	0.020300909749510883	5.4144703055025425e-11	10.266444023738472	-0.2257670354836323	
AMS(ph)EVTSLHEDDWR	ddPTM_K562_Methotrexat_30min_R1	1	AMSEVTSLHEDDWR	14	0	S4R3V8;Q86X29-6;Q86X29-5;Q86X29-4;Q86X29;Q86X29-2;Q86X29-3	S4R3V8	LSR	Lipolysis-stimulated lipoprotein receptor	1	AMS(0.998)EVT(0.002)SLHEDDWR	89.484	0.012894	0.0	424.57	625.97	525.75	707.98	587.32	547.16	567.35	514.43	536.08	732.26	True	False	405.9064111657636	729.4009028292597	415.4022597988554	645.9124926098615	664.5628745033259	652.8909261665752	694.5926797664221	496.33720531829994	511.1577578093818	599.6406182555228	0.67691613744684	1.2163967560290299	0.6927520370573721	1.0771660106831207	1.1082686100162382	1.0888037039017946	1.1583482816543254	0.8277244572961825	0.8524401820818014	1.0	9.227954301164337	-3.0256946009479266	22.117424150417914	0.9796072869238787	0.004842896228976157	0.0	0.18427601297577934	0.0	0.0	0.040706054563306907	0.0	0.0009425521731043971	3.0256946009479266	-0.9747643906949025	
AMSEVTS(ph)LHEDDWR	ddPTM_K562_Methotrexat_30min_R1	3	AMSEVTSLHEDDWR	14	0	S4R3V8;Q86X29-6;Q86X29-5;Q86X29-4;Q86X29;Q86X29-2;Q86X29-3	S4R3V8	LSR	Lipolysis-stimulated lipoprotein receptor	1	AMSEVT(0.074)S(0.926)LHEDDWR;AMSEVT(0.003)S(0.997)LHEDDWR;AMSEVT(0.04)S(0.96)LHEDDWR	107.5	0.0015457000000000001	101366000.0	7606.799999999999	6579.3	6423.1	7498.299999999999	6328.2	6391.9	6525.0	8000.3	8250.6	9533.0	True	False	7272.414180125144	7666.417496021456	5074.979086855025	6840.935680861779	7160.469220240998	7627.044211865139	7988.397348155289	7718.924914386789	7867.0314068461585	7806.481323341295	0.9315867007047982	0.9820580077606732	0.6500981526313132	0.8763148719010516	0.9172466984364994	0.9770143417957536	1.0233032037455938	0.988784139059846	1.0077563861356869	1.0	12.930456702267257	-8.102065381096136	2.2007240019444154	1.0027776607215912	0.8549134731608621	0.4019157203324071	0.08078787795174669	0.3401068376727417	3.25068623844575	0.03157230357619942	0.03230818610260037	7.905596038204255e-09	8.102065381096136	-0.14786418756072917	
AMSTTS(ph)ISSPQPGK	ddPTM_K562_Methotrexat_30min_R1	1	AMSTTSISSPQPGK	14	0	H0Y5J4;Q9UJU6-5;Q9UJU6;B4DDD6;Q9UJU6-4;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3	H0Y5J4	DBNL	Drebrin-like protein	1	AMS(0.001)T(0.004)T(0.077)S(0.391)IS(0.391)S(0.136)PQPGK	104.7	0.0019625	13833000.0	4964.5	3959.7	6409.1	4066.1	3347.5	3384.8	3144.7	4899.8	4381.0	5596.9	True	False	4746.266524324457	4613.973121608096	5063.917495533702	3709.6313260275133	3787.7549247427	4038.864695680649	3849.9790254013733	4727.471256766921	4177.328266234337	4583.247174930128	1.0355685266738457	1.006703968934086	1.1048754959655656	0.8093893225568982	0.8264347917915741	0.881223408105242	0.8400112144202798	1.0314676639361027	0.9114342095891919	1.0	12.162154377145002	-7.2554640008307665	24.98697470620612	0.8949591208470642	1.044814795123588	0.47991783535428556	0.0709299249803359	438.8228972898831	1835001.4897876692	0.02021904460711298	0.03388675797166349	5.553106455501221e-08	7.2554640008307665	0.1498556742765238	
AMSTTSIS(ph)SPQPGK	ddPTM_K562_Methotrexat_30min_R1	1	AMSTTSISSPQPGK	14	0	H0Y5J4;Q9UJU6-5;Q9UJU6;B4DDD6;Q9UJU6-4;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3	H0Y5J4	DBNL	Drebrin-like protein	1	AMSTTS(0.035)IS(0.685)S(0.28)PQPGK	83.53	0.023657	32005000.0	6562.7	5530.8	9849.1	6784.1	6012.9	5368.9	4867.7	6805.1	6360.4	8249.1	True	False	6274.211565955099	6444.670692474194	7781.908505915187	6189.348485994744	6803.701743684953	6406.3639401559385	5959.405635496632	6565.760775832606	6064.706392275023	6755.108054586669	0.928809948746113	0.9540440567931863	1.152003556868543	0.9162471474889615	1.007193621287122	0.9483732737340987	0.8822072996227261	0.9719697631445736	0.8977956152984307	1.0	12.721763131721488	-8.378125913109534	4.900726373781882	0.9332080578362435	0.9941297436327897	0.12274344801749792	0.06848915517103348	0.4600008128378123	16.658866917349222	0.024539857293261587	0.02147570091549323	4.186721637212839e-09	8.378125913109534	0.06092168579654622	
AMTLS(ph)PQEEVAAGQMASSSR	ddPTM_K562_Methotrexat_30min_R1	10	AMTLSPQEEVAAGQMASSSR	20	0	A0A494BZT8;Q9Y6A5	A0A494BZT8	TACC3	Transforming acidic coiled-coil-containing protein 3	1	AMT(0.06)LS(0.931)PQEEVAAGQMAS(0.007)S(0.001)S(0.001)R;AMT(0.002)LS(0.996)PQEEVAAGQMAS(0.002)SSR;AMT(0.036)LS(0.963)PQEEVAAGQMASSSR;AMT(0.018)LS(0.974)PQEEVAAGQMAS(0.006)S(0.001)S(0.001)R;AMT(0.201)LS(0.799)PQEEVAAGQMASSSR;AMT(0.08)LS(0.502)PQEEVAAGQMAS(0.127)S(0.146)S(0.146)R;AMT(0.013)LS(0.987)PQEEVAAGQMASSSR;AMT(0.036)LS(0.964)PQEEVAAGQMASSSR;AMT(0.006)LS(0.994)PQEEVAAGQMASSSR;AMT(0.001)LS(0.999)PQEEVAAGQMASSSR	175.52	6.5045e-14	735543200.0	18841.95	16479.269999999997	22264.4	20693.429999999997	18477.87	17584.99	17330.37	18533.17	18737.91	20734.929999999997	True	False	18013.680438713905	19202.189267803795	17591.406701028318	18879.26912052272	20908.03378379548	20983.040441059224	21217.14662843678	17881.34790639925	17866.788653995667	16979.633251420237	1.0608992651361995	1.130895407661273	1.0360298388398295	1.1118773203740187	1.231359563201794	1.2357770118093763	1.2495644820044687	1.0531056614490533	1.0522482075695732	1.0	14.051517677541025	-9.465016279872614	12.598151187433883	1.0349543913413857	1.1506583023034909	0.37170754052002686	0.06939174694204306	1.882542969112907	408.96110669272724	0.043058141494803005	0.02065424919378239	3.4275493786532344e-10	9.465016279872614	0.1157039109621052	
AMVS(ph)PFHS(ph)PPSTPSSPGVR	ddPTM_K562_Methotrexat_30min_R1	1	AMVSPFHSPPSTPSSPGVR	19	0	Q6JBY9;B7ZKW8;F6T4W9	Q6JBY9	RCSD1	CapZ-interacting protein	2	AMVS(1)PFHS(0.876)PPS(0.115)T(0.008)PS(0.001)SPGVR	94.057	0.002875	0.0	649.08	686.05	776.44	693.37	717.67	863.59	765.8	610.42	971.91	816.7	True	False	620.5472203864472	799.4081016438709	613.4758546804059	632.5833286263733	812.056184268885	1030.4665453033713	937.5501439413518	588.9511826106503	926.7261162373463	668.7877160151934	0.9278687474761419	1.1953091878046846	0.9172953389988238	0.9458656513541621	1.2142211419601445	1.5407976561578494	1.4018650783951492	0.8806250002912295	1.3856805291804928	1.0	9.385404538678692	-7.840252554996597	6.000136729141703	1.2575537679856117	1.0057334619996143	0.2653717531184272	0.1949400224915389	0.29038578731354303	17.03304409727025	0.062167842257148706	0.07116430234159762	1.4445994494256489e-08	7.840252554996597	-0.25182030598599736	
AMVS(ph)PFHSPPSTPSSPGVR	ddPTM_K562_Methotrexat_30min_R1	1	AMVSPFHSPPSTPSSPGVR	19	0	Q6JBY9;B7ZKW8;F6T4W9	Q6JBY9	RCSD1	CapZ-interacting protein	1	AMVS(0.991)PFHS(0.008)PPSTPSSPGVR	91.307	0.0019962	10765000.0	1383.9	1566.1	2173.9	1913.6	1601.4	1478.7	1668.8	1610.5	1611.5	1665.1	True	False	1323.0654130350713	1824.8714058515638	1717.6280981012494	1745.8376590556668	1812.012169225678	1764.4378472887533	2043.0708803987065	1553.8578021599096	1536.581716739701	1363.534254851106	0.9703206269501063	1.3383392455005354	1.259688263782423	1.2803768243037703	1.328908432464386	1.2940179837883317	1.4983641761327104	1.1395810531577635	1.1269109751170068	1.0	10.413135228907235	-9.504410330133034	24.192810407182982	1.0867188702677137	1.2874758195416554	0.33539440473561	0.12624023776188747	547.4053414532419	717084.1530094149	0.06971326945424251	0.03246662463570427	3.130326731226729e-10	9.504410330133034	0.2007569492739416	
AMVSPFHS(ph)PPSTPSSPGVR	ddPTM_K562_Methotrexat_30min_R1	1	AMVSPFHSPPSTPSSPGVR	19	0	Q6JBY9;B7ZKW8;F6T4W9	Q6JBY9	RCSD1	CapZ-interacting protein	1	AMVS(0.019)PFHS(0.933)PPS(0.033)T(0.012)PS(0.001)S(0.001)PGVR	82.755	0.0043631	5722800.0	1661.9	1808.6	2149.6	1871.0	1707.6	1527.4	1393.4	1674.9	1637.8	2461.4	True	False	1588.8448659028722	2107.440409056344	1698.4283360221011	1706.9723349148994	1932.1793306917511	1822.5484330485167	1705.905419911048	1615.9928176576425	1561.6590354801624	2015.6166085463415	0.7882674012339796	1.0455561837110607	0.8426346205030549	0.8468735213220754	0.9586045890370167	0.9042138397355908	0.8463441969459378	0.8017362085655234	0.7747798013067712	1.0	10.977005533842226	-8.791083567100504	5.721119940872507	0.8384261817974376	0.9024744832690962	0.03768401901676033	0.0865282664504252	0.41944188888671124	38.14111561909329	0.034614077273105504	0.02384348405645675	1.6177687160531666e-09	8.791083567100504	0.06404830147165863	
AMVSPFHSPPS(ph)TPSSPGVR	ddPTM_K562_Methotrexat_30min_R1	1	AMVSPFHSPPSTPSSPGVR	19	0	Q6JBY9;B7ZKW8;F6T4W9	Q6JBY9	RCSD1	CapZ-interacting protein	1	AMVSPFHSPPS(0.393)T(0.26)PS(0.174)S(0.174)PGVR	88.555	0.030424	36166000.0	1694.2	1431.3	2398.2	1836.7	1660.8	1468.5	1578.0	1592.6	1657.1	1990.9	True	False	1619.7249965778005	1667.7979970597946	1894.8505933421102	1675.679362660714	1879.2243103846674	1752.2668416470783	1931.9066690251418	1536.5873553057263	1580.0617826927455	1630.3287177845582	0.9934959612186879	1.0229826530481247	1.1622506385810396	1.0278168717642309	1.1526658948499242	1.0747935815227625	1.1849798436050343	0.9425015572281543	0.9691676074012117	1.0	10.670947164274727	-9.285238029840947	24.993618837511473	0.9668759174013164	1.0883640819391678	0.43560205054231105	0.061440980777454614	751.8750149969707	789623.1751934346	0.033332821258326074	0.016026344176787544	5.185157708558877e-10	9.285238029840947	0.12148816453785138	
ANEAGGQVGPEAPRPPET(ph)SPEMR	ddPTM_K562_Methotrexat_30min_R1	1	ANEAGGQVGPEAPRPPETSPEMR	23	1	Q8N3D4;E9PIH6	Q8N3D4	EHBP1L1	EH domain-binding protein 1-like protein 1	1	ANEAGGQVGPEAPRPPET(0.5)S(0.5)PEMR	64.574	0.0058795	146600000.0	686.21	610.8	677.95	785.18	392.06	758.31	631.37	861.21	859.92	695.01	True	False	656.0450300446543	711.7243181751717	535.6575597349195	716.3444884705933	443.6227619998873	904.8426753077258	772.9707944375182	830.920756161525	819.9425068934562	569.1369542154029	1.152701516191407	1.2505326053837709	0.941175152601649	1.2586504586723364	0.779465748470777	1.5898505071685567	1.3581455020841429	1.4599662699938547	1.4406769773433659	1.0	9.152632046863314	-8.27531243630601	24.999659900808624	1.3977518352754152	1.0887741315991681	0.35685621311950466	0.19466843727484978	822.7197501741416	1482560.8835091216	0.06415906204050371	0.05686632259021115	5.305026573734673e-09	8.27531243630601	-0.3089777036762471	
ANNLHSGDNFQLNDS(ph)EIER	ddPTM_K562_Methotrexat_30min_R1	1	ANNLHSGDNFQLNDSEIER	19	0	F8VQX7;Q9BZF1-3;Q9BZF1-2;Q9BZF1;F8VUA7	F8VQX7	OSBPL8	Oxysterol-binding protein;Oxysterol-binding protein-related protein 8	1	ANNLHSGDNFQLNDS(1)EIER	69.27	0.015135	15426000.0	1279.2	790.0	1238.7	1164.2	975.79	890.83	887.3	858.38	838.62	1388.2	True	False	1222.9678996708308	920.5340722959816	978.713797837075	1062.1363935371069	1104.1234885779481	1062.9702897817272	1086.2996118035542	828.1902888655844	799.6327392443362	1136.7835280669667	1.0758142332959517	0.8097707695160709	0.8609500170197928	0.9343347852191412	0.9712697812005113	0.9350683428614113	0.9555905631837774	0.7285382558928111	0.7034168946871218	1.0	10.15074183993224	-9.253599185824577	24.92965897610072	0.7869831798755117	0.9284534327401084	0.2350609496039805	0.09938853444217671	689.8025841520649	2193390.975388723	0.046240700340149064	0.026057313812825975	5.577002178998641e-10	9.253599185824577	0.1414702528645967	
ANRDQDS(ph)SDDERALEDWVSSETSALPRPR	ddPTM_K562_Methotrexat_30min_R1	1	ANRDQDSSDDERALEDWVSSETSALPRPR	29	3	Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9	Q5TAQ8	DCAF8	DDB1- and CUL4-associated factor 8	1	ANRDQDS(0.498)S(0.498)DDERALEDWVS(0.003)SETSALPRPR	79.236	0.00010979	17254000.0	328.96	456.73	571.99	481.12	515.86	375.99	370.25	404.18	490.21	573.11	True	False	314.4993122855822	532.1968694173968	451.9371157058438	438.9409565869891	583.7046319575113	448.644746197402	453.2879874566278	389.96476030859503	467.42024409740543	469.3142254505542	0.6701252492051663	1.1339883612231731	0.9629734007571836	0.9352815934049177	1.2437394826400996	0.9559581232950931	0.9658517958228502	0.8309246538057065	0.9959643640647574	1.0	8.874410380539214	-12.259943883181542	17.277833131041216	1.000002022262402	0.9739119144472435	0.002261361286113317	0.1461672492409732	0.0	0.0	0.13725343079458302	0.03328884662614528	5.496118866823383e-13	12.259943883181542	-0.026090107815158525	
ANSALT(ph)PPKPESGLTLQESNTPGLR	ddPTM_K562_Methotrexat_30min_R1	1	ANSALTPPKPESGLTLQESNTPGLR	25	1	Q9BW04-2;Q9BW04	Q9BW04-2	SARG	Specifically androgen-regulated gene protein	1	ANS(0.02)ALT(0.652)PPKPES(0.309)GLT(0.016)LQES(0.002)NT(0.002)PGLR	62.193000000000005	0.02765	16757000.0	1495.9	1356.5	2442.5	1772.6	1333.5	1299.6	921.89	1706.8	1464.8	2090.3	True	False	1430.1420271400852	1580.6385684424035	1929.8526287374316	1617.1989101390445	1508.878623493469	1550.7293070511016	1128.6472998146949	1646.770876576551	1396.7017677197116	1711.7264145788654	0.8354968498233649	0.9234177582235223	1.12743053580337	0.9447765112259032	0.8814952031132247	0.9059446029712793	0.6593619694140054	0.9620526169082368	0.8159608660729472	1.0	10.741236418719401	-7.810139247756268	3.115913991789125	0.8567790347041523	0.9690071402198809	0.1273292489009783	0.10947054427446228	0.45272554622981914	8.970049029778213	0.03553559080130201	0.042940160342278176	1.5483201017409728e-08	7.810139247756268	0.1122281055157286	
ANSWQLVET(ph)PEKR	ddPTM_K562_Methotrexat_30min_R1	1	ANSWQLVETPEKR	13	1	F8WF49;A0A0B4J2C2;Q9Y2H0-3;Q9Y2H0-1;Q9Y2H0	F8WF49	DLGAP4	Disks large-associated protein 4	1	ANSWQLVET(1)PEKR	92.096	0.013197	27811000.0	2561.5	1520.1	3527.3	2411.5	1616.0	1717.0	1542.8	2487.0	2417.3	2945.5	True	False	2448.8995270534992	1771.2706877178753	2786.9679334065686	2200.0875390952856	1828.5323251334448	2048.785949682012	1888.8121729860525	2399.530800354981	2304.920250620467	2412.0414075214317	1.015280881753163	0.7343450581712856	1.1554395064346779	0.9121267703924096	0.758084964640972	0.8493991617612012	0.7830761806560196	0.9948132701505707	0.955589005824307	1.0	11.23603895886238	-9.320567627770387	24.991070884683385	0.9814010000493424	0.8858709866873586	0.12090283646375743	0.11936578576554004	616.5398140275554	260582.27932180386	0.06585972679499882	0.03163799633677474	4.780049260496615e-10	9.320567627770387	-0.09553001336198375	
ANVLS(ph)SPCDQAGLHHR	ddPTM_K562_Methotrexat_30min_R1	1	ANVLSSPCDQAGLHHR	16	0	Q14153-2;Q14153	Q14153-2	FAM53B	Protein FAM53B	1	ANVLS(0.61)S(0.39)PCDQAGLHHR	101.39	0.0014109	52790000.0	2933.3	2519.7	3154.3	3206.7	2444.4	2735.3	2721.9	3241.6	3172.5	3704.7	True	False	2804.3556442342488	2936.037597423016	2492.255536059971	2925.573589722934	2765.881445269918	3263.858012909264	3332.355362750024	3127.591090643629	3025.0111674568416	3033.7429307230154	0.9243880276849634	0.9677937994315445	0.8215117737302828	0.9643445923170879	0.9117059383178325	1.0758518725683215	1.0984303676501166	1.0309347766319301	0.9971217853768207	1.0	11.566883126251028	-8.254940716559355	24.90659408450936	1.0460238479991382	0.917937913956922	0.6253414209444353	0.04731920772105984	322.38000105882736	1235545.445763577	0.015960627630012332	0.015601693424100291	5.559801462532071e-09	8.254940716559355	-0.12808593404221613	
ANVLSS(ph)PCDQAGLHHR	ddPTM_K562_Methotrexat_30min_R1	3	ANVLSSPCDQAGLHHR	16	0	Q14153-2;Q14153	Q14153-2	FAM53B	Protein FAM53B	1	ANVLS(0.379)S(0.621)PCDQAGLHHR;ANVLS(0.088)S(0.912)PCDQAGLHHR;ANVLS(0.251)S(0.749)PCDQAGLHHR	165.3	1.1123000000000001e-10	133367000.0	9219.8	8179.4	10446.3	10164.5	9072.599999999999	8488.2	7737.7	9994.8	9258.1	11099.3	True	False	8814.508631476801	9530.906823971829	8253.764387136061	9273.394066404322	10265.805923889657	10128.424518398866	9473.0761932293	9643.277218893427	8827.692951751675	9089.109215583976	0.9697879541774731	1.0486073605134325	0.90809387271795	1.0202753478310478	1.1294622696675427	1.1143473225113087	1.0422447314184522	1.060970551697111	0.9712385165991753	1.0	13.149923193687357	-6.2542045042097625	22.50442708213483	1.0362848137161689	0.9697878207568275	0.0839493158346385	0.06148932859862682	590.2283506057853	1835730.125749484	0.016560231671869395	0.1539986269545595	5.569234384211674e-07	6.2542045042097625	-0.06649699295934142	
ANVS(ph)SPHREFPPATAR	ddPTM_K562_Methotrexat_30min_R1	1	ANVSSPHREFPPATAR	16	1	H0Y555;Q5QPM9;Q5QPM7;Q92530	H0Y555	PSMF1	Proteasome inhibitor PI31 subunit	1	ANVS(0.5)S(0.5)PHREFPPATAR	98.882	0.001898	90733000.0	520.66	414.85	450.12	543.07	436.86	392.24	486.9	501.15	520.11	620.66	True	False	497.7724098206808	483.396911255681	355.6459632537531	495.459896270569	494.3147472511118	468.0348287147772	596.0997193588981	483.5242704454759	495.93019962363394	508.2524596816333	0.9793802279530194	0.9510960587548919	0.6997427291872388	0.9748302970947205	0.972577186465065	0.9208707597951454	1.1728417797176858	0.9513466412899467	0.9757556312354732	1.0	8.989401481766834	-7.498251077126511	24.947586691211242	0.9987565112853939	0.8763605059182142	0.2565121033036113	0.09339583266052444	1031.8904902879133	1045295.559807388	0.026799561215645862	0.03953068820205187	3.1750379665266686e-08	7.498251077126511	-0.12239600536717965	
APACS(ph)PEAAAAQLR	ddPTM_K562_Methotrexat_30min_R1	2	APACSPEAAAAQLR	14	0	A0A0C3SFZ9;M0QZI3;O14526-3;O14526-2;O14526	A0A0C3SFZ9	FCHO1	F-BAR domain only protein 1	1	APACS(1)PEAAAAQLR;APACS(1)PEAAAAQLR	84.759	0.026381	75983000.0	1365.58	1430.37	1425.33	1687.75	1345.78	1203.46	1174.59	1477.5500000000002	1524.44	1918.6	True	False	1305.5507382993223	1666.7143303670928	1126.1727112869287	1539.7875779009194	1522.7736587364395	1436.0116126990752	1438.0217074589618	1425.5837290166871	1453.5691171372457	1571.122948385883	0.8309666278126735	1.0608427125830076	0.7167947692724617	0.9800554307241476	0.9692262851235698	0.914003333841176	0.9152827338791882	0.9073661170064903	0.9251784646329505	1.0	10.617580367958798	-15.999999999998089	0.2157794661026954	1.4144217344250924	0.9043077746388827	0.0889598549337447	0.0862695505076412	407.68834506002077	4.075107371351846	73.39379529605532	0.16520597387719135	1.0000000000044011e-16	15.999999999998089	-0.5101139597862098	
APAPVVLGS(ph)PVVLGPPVGQAR	ddPTM_K562_Methotrexat_30min_R1	2	APAPVVLGSPVVLGPPVGQAR	21	0	A0A0C4DFM2;Q6ZN55;Q6ZN55-2	A0A0C4DFM2	ZNF574	Zinc finger protein 574	1	APAPVVLGS(1)PVVLGPPVGQAR;APAPVVLGS(1)PVVLGPPVGQAR	108.97	5.4813e-05	12320800.0	1268.19	1040.47	1482.4499999999998	1388.85	948.1800000000001	1104.79	930.97	1507.94	1424.64	1317.19	True	False	1212.4418860878297	1212.389982533923	1171.3040038779143	1267.0916768287325	1072.8822896318243	1318.2750316535758	1139.7637209520512	1454.9048954914717	1358.4087973540481	1078.6341271679353	1.1240529624917583	1.1240048427887013	1.085914096704221	1.1747186973914983	0.994667480481808	1.2221707050145374	1.0566731500927178	1.3488400365297861	1.2593786559680713	1.0	10.074989870125192	-9.239529475360609	24.994291137161916	1.2280820500959637	1.1133877558743348	0.13208906830256295	0.10073278608710662	1132.627740242404	1292077.0736392795	0.04421211916457435	0.02549485730609184	5.760637200614762e-10	9.239529475360609	-0.11469429422162891	
APDSGLPSGGGGRPGCAY(ph)PGSPGPGAR	ddPTM_K562_Methotrexat_30min_R1	1	APDSGLPSGGGGRPGCAYPGSPGPGAR	27	1	Q6PJ61	Q6PJ61	FBXO46	F-box only protein 46	1	APDS(0.002)GLPS(0.1)GGGGRPGCAY(0.681)PGS(0.217)PGPGAR	74.873	0.00084963	64484000.0	510.31	592.29	698.12	567.43	516.14	702.43	685.33	622.86	546.01	679.71	True	False	487.8773834279411	690.1558552913755	551.5941523742782	517.6842928919087	584.0214568653316	838.164656164901	839.0326980247149	600.9536607595916	520.6261142767884	556.6079324754343	0.8765189192654443	1.2399317634982416	0.9909922589876541	0.9300699158015622	1.0492510487013356	1.5058438934516858	1.5074034146319777	1.079671391111758	0.9353551825274535	1.0	9.120517659100772	-8.03240957497682	24.837308926451257	1.234832882352322	1.020173901264754	0.17758020619665582	0.19863300209296927	1022.5493811302379	783635.2728149014	0.06943454507710363	0.06949516398059395	9.280907089941547e-09	8.03240957497682	-0.2146589810875681	
APDSGLPSGGGGRPGCAYPGS(ph)PGPGAR	ddPTM_K562_Methotrexat_30min_R1	1	APDSGLPSGGGGRPGCAYPGSPGPGAR	27	1	Q6PJ61	Q6PJ61	FBXO46	F-box only protein 46	1	APDSGLPS(0.001)GGGGRPGCAY(0.474)PGS(0.525)PGPGAR	63.573	0.00096744	51859000.0	634.2	513.26	733.47	673.87	750.57	506.37	653.63	581.98	685.39	742.4	True	False	606.3213273696382	598.0674910716903	579.5246704606112	614.7928633506697	849.283110937753	604.2188359583461	800.2231660804207	561.5114335305959	653.5263684990532	607.9441659969137	0.9973306123850791	0.98375397696427	0.9532531157862171	1.0112653393795223	1.3969755093300202	0.9938722497115194	1.3162773998632025	0.9236233603949848	1.0749776131618818	1.0	9.247795021439964	-7.544975449580287	24.999951548162507	1.125417817972904	0.9792736116626789	0.18222998867620577	0.13692817016848904	370.15244383172785	418783.60738569987	0.03924699185378224	0.0506712218219149	2.851179438498207e-08	7.544975449580287	-0.14614420631022507	
APFLGS(ph)GGTIAPSSFSSR	ddPTM_K562_Methotrexat_30min_R1	1	APFLGSGGTIAPSSFSSR	18	0	Q96PY6-5;Q96PY6-4;Q96PY6-2;Q96PY6-6;Q96PY6;Q96PY6-3	Q96PY6-5	NEK1	Serine/threonine-protein kinase Nek1	1	APFLGS(0.891)GGT(0.034)IAPS(0.006)S(0.024)FS(0.012)S(0.034)R	97.12899999999999	0.013059000000000001	0.0	419.86	383.61	408.2	495.98	406.21	380.77	347.8	353.11	426.05	489.58	True	False	401.40345712616914	446.99503224488797	322.5243983830581	452.49820345862753	459.63373502008443	454.34841354712825	425.8030034771512	340.6909211553466	406.24302849329814	400.9123178728034	1.0012250540366823	1.1149446208502507	0.8044761510305721	1.1286712412817177	1.1464694760661145	1.1332862406369824	1.0620851106207339	0.8497891084090783	1.013296450078608	1.0	8.647142934180351	-9.214930761198644	24.629441348705903	0.948657005430145	1.0577431692933095	0.16898765750946965	0.10287296548703301	585.6753747931347	310155.10949498264	0.04977780883433809	0.02873912805612457	6.096340823767699e-10	9.214930761198644	0.1090861638631645	
APGS(ph)PLSSEGAAGEGVR	ddPTM_K562_Methotrexat_30min_R1	1	APGSPLSSEGAAGEGVR	17	0	Q6JBY9;B7ZKW8	Q6JBY9	RCSD1	CapZ-interacting protein	1	APGS(0.894)PLS(0.1)S(0.006)EGAAGEGVR	201.75	5.2957e-16	249230000.0	604.12	545.96	838.68	661.1	513.87	511.14	658.5	598.85	693.13	682.61	True	False	577.5636081528631	636.1706102667265	662.6525292403308	603.142389423966	581.4529120769323	609.9105709495999	806.1853875494652	577.788106068589	660.9065375884517	558.9827143738597	1.0332405516328294	1.1380863735282551	1.1854615754667763	1.0790000726580096	1.0401983766675906	1.091108106326305	1.4422367039605288	1.0336421703411598	1.1823380591093253	1.0	9.126659860548576														
APGSPLS(ph)SEGAAGEGVR	ddPTM_K562_Methotrexat_30min_R1	2	APGSPLSSEGAAGEGVR	17	0	Q6JBY9;B7ZKW8	Q6JBY9	RCSD1	CapZ-interacting protein	1	APGS(0.12)PLS(0.873)S(0.007)EGAAGEGVR;APGS(0.117)PLS(0.853)S(0.03)EGAAGEGVR	173.77	4.3249999999999995e-10	367770000.0	899.27	814.74	1175.58	842.86	762.05	368.91	661.3900000000001	1086.99	947.41	957.4499999999999	True	False	859.739167555495	949.3619367878829	928.8418232512378	768.967772424571	862.2729321583794	440.19663639906264	809.723543616311	1048.759945588203	903.3651158897671	784.0465271198079	1.0965410059448177	1.210848978918841	1.1846769179162553	0.9807680358579883	1.0997726567655823	0.5614419822967948	1.0327493530145813	1.3376246298045842	1.1521830460856393	1.0	9.614795459489335	-7.255156277027585	23.908763775092748	1.0218836543433791	1.1687049867377834	0.10729971028013241	0.18554510078458983	702.504478405618	2673189.301451556	0.05561300361138302	0.09319130651694048	5.557042560273981e-08	7.255156277027585	0.1468213323944043	
APGSPLSS(ph)EGAAGEGVR	ddPTM_K562_Methotrexat_30min_R1	1	APGSPLSSEGAAGEGVR	17	0	Q6JBY9;B7ZKW8	Q6JBY9	RCSD1	CapZ-interacting protein	1	APGS(0.189)PLS(0.307)S(0.503)EGAAGEGVR	188.0	7.6961e-09	272690000.0	553.23	575.67	474.86	481.63	520.25	469.35	433.2	594.99	459.09	425.2	True	False	528.9106716188979	670.7896827830729	375.19337534585725	439.406245678815	588.6719939051202	560.0452448941481	530.3561273901721	574.063864456458	437.74700610488975	348.1921597277583	1.5190194748567527	1.9264927829148841	1.0775468799734333	1.2619647898515995	1.6906526395234929	1.6084372644462526	1.5231707911081132	1.6486984224610413	1.2571994913588862	1.0	8.443739907843497	-9.99137817102329	4.4090138297072965	1.0010357693946246	1.5272430443542855	0.37772694080464364	0.21937681278724658	0.1818206345408709	9.982217217009104	0.2189552646924863	0.05733254848161981	1.0200508661998104e-10	9.99137817102329	0.5262072749596609	
APGTPHSHTKPYVR	ddPTM_K562_Methotrexat_30min_R1	1	APGTPHSHTKPYVR	14	1	F8VUA6;F8VYV2;H0YHA7;J3QQ67;Q07020-2;Q07020	F8VUA6	RPL18	60S ribosomal protein L18	0		85.973	0.008197	4045500.0	1885.6	1340.6	2659.5	1885.8	1396.7	1414.8	1341.9	1589.7	1767.0	1834.4	False	True	1802.7112817536884	1562.1113636961925	2101.3072942178915	1720.4748418933814	1580.3905312585907	1688.1900766511997	1642.8552339447656	1533.7893499494614	1684.8525556804536	1502.1723843005648	1.2000695130559595	1.0399015319560254	1.3988456426033244	1.145324504613671	1.052070020575199	1.1238324537814264	1.0936529329885831	1.0210474949342236	1.1216106575311247	1.0	10.552834665893187	-7.525189037638021	17.822727383443734	1.0760246064690768	1.2083763382119157	0.3475049845825302	0.08875911318830526	2.344378869572463	18073.74251296595	0.025634757843920636	0.03359319282503175	2.984083438531205e-08	7.525189037638021	0.13235173174283887	
APGYPS(ph)SPVTTASGTTLR	ddPTM_K562_Methotrexat_30min_R1	2	APGYPSSPVTTASGTTLR	18	0	H0YJG4;Q9HCK8-2;Q9HCK8;H0YJA4	H0YJG4	CHD8	Chromodomain-helicase-DNA-binding protein 8	1	APGYPS(0.834)S(0.164)PVT(0.002)TASGTTLR;APGYPS(0.995)S(0.005)PVTTASGTTLR	258.12	3.790999999999999e-99	289120000.0	2797.0	2335.6000000000004	3006.1	2356.1000000000004	2652.3	2464.8	2369.3	4302.6	3632.5	4418.4	True	False	2674.0472290332364	2721.5182015879677	2375.16069078714	2149.5443710812383	3001.1239393263836	2941.0877162354236	2900.675837085724	4151.275119263106	3463.6258678603563	3618.184944828616	0.7390576407254105	0.7521777474304534	0.6564508799313589	0.5940946645509456	0.8294556483675101	0.8128627367263381	0.8016936340502964	1.1473363530508363	0.9572827040836684	1.0	11.821050438383455	-8.876547885762275	1.3249507805890754	1.0411368821400215	0.7053126943820474	0.7178350368343558	0.0834811360378881	0.2343808437593068	0.8114122591186635	0.05691918414379886	0.02970882471397516	1.3287770367078992e-09	8.876547885762275	-0.3358241877579742	
APGYPSS(ph)PVTTASGTTLR	ddPTM_K562_Methotrexat_30min_R1	1	APGYPSSPVTTASGTTLR	18	0	H0YJG4;Q9HCK8-2;Q9HCK8;H0YJA4	H0YJG4	CHD8	Chromodomain-helicase-DNA-binding protein 8	1	APGYPS(0.311)S(0.683)PVT(0.005)T(0.002)ASGTTLR	138.98	1.0383e-08	35773000.0	1405.8	1169.7	1693.5	1256.9	1498.7	1538.5	1440.3	2144.4	1921.9	2344.4	True	False	1344.0027152573919	1362.9730434995054	1338.0574930468126	1146.7095284631419	1695.8053191073595	1835.7933509526933	1763.323938781314	2068.9802365425103	1832.5512884902462	1919.8064422995212	0.7000719893655328	0.7099533648126279	0.6969752072735538	0.5973047611454136	0.8833209857740367	0.9562387699636021	0.9184904790033028	1.0777025177935702	0.9545500255198842	1.0	10.906745148311089	-7.936164234757737	4.037692951403401	0.9780690833052803	0.6808008661500276	0.8938958136093191	0.04958549575783597	0.06963679953649171	2.2954167331024644	0.01670728637930865	0.018871865638600126	1.1583392305369282e-08	7.936164234757737	-0.29726821715525276	
APLAGPSAAARS(ph)PEQLCAPAEAAPCPAEPER	ddPTM_K562_Methotrexat_30min_R1	1	APLAGPSAAARSPEQLCAPAEAAPCPAEPER	31	1	Q86UD0	Q86UD0	SAPCD2	Suppressor APC domain-containing protein 2	1	APLAGPS(0.014)AAARS(0.986)PEQLCAPAEAAPCPAEPER	57.156000000000006	0.0010847	27037000.0	753.31	920.41	678.47	794.98	1146.4	785.35	862.42	1094.4	958.05	945.55	True	False	720.195394387925	1072.4921082049932	536.0684188411403	725.285337686075	1297.1716940179329	937.1077726166382	1055.8396384668329	1055.909331688175	913.5104646121441	774.3017324331651	0.9301224112269305	1.3851087544835978	0.6923249637535995	0.9366960027416431	1.6752793383810491	1.210261753737618	1.36360231966544	1.3636923274988504	1.1797861561558562	1.0	9.596752059836765	-7.701401095032046	24.999999568087425	1.3157772728983024	0.9935839925640289	0.3114586289974277	0.22682167992249702	87.88778372958362	36595.767831638375	0.06528410203190202	0.08428139077106424	1.9888356905081373e-08	7.701401095032046	-0.3221932803342735	
APLS(ph)PSLLIR	ddPTM_K562_Methotrexat_30min_R1	2	APLSPSLLIR	10	0	O75807	O75807	PPP1R15A	Protein phosphatase 1 regulatory subunit 15A	1	APLS(0.836)PS(0.164)LLIR;APLS(0.813)PS(0.187)LLIR	113.69	0.002802	27684000.0	2931.6000000000004	2362.8	3236.2	3308.2	2076.94	2350.0	2675.4	2710.3999999999996	2874.8	3181.4	True	False	2802.730374198727	2753.2125392670177	2556.965845289694	3018.1752423118483	2350.0940144570886	2804.1042409742163	3275.4265540620186	2615.0736957306563	2741.151175478309	2605.2176316036935	1.0758142967401347	1.0568071188633186	0.9814787886706043	1.1585117518393082	0.9020720518502101	1.0763416487581863	1.2572564051187405	1.0037832018359616	1.0521774235770618	1.0	11.347188180360014	-8.505049645634585	24.91956835108858	1.09121659348838	1.0349631735403693	0.045470030100567715	0.09109840492572827	2049.662220614391	2864802.9409621707	0.03218489176632772	0.027775298231576755	3.125722035105577e-09	8.505049645634585	-0.0562534199480107	
APLSPS(ph)LNSRPSPISATPPALVPETR	ddPTM_K562_Methotrexat_30min_R1	2	APLSPSLNSRPSPISATPPALVPETR	26	1	X6RKU3;Q6P3S6	X6RKU3	FBXO42	F-box only protein 42	1	APLS(0.019)PS(0.433)LNS(0.433)RPS(0.072)PIS(0.03)AT(0.013)PPALVPETR;APLS(0.183)PS(0.772)LNS(0.043)RPS(0.001)PISAT(0.001)PPALVPETR	94.152	1.7688e-05	163831000.0	824.83	704.02	1084.55	996.6800000000001	947.67	962.58	946.52	910.9200000000001	926.5699999999999	1074.76	True	False	788.5714608235555	820.3473387060976	856.9177762526841	909.3026118455276	1072.3052156925803	1148.5849618199825	1158.8012042875023	878.8824272856286	883.4939629410516	880.1105493626656	0.8959913744865367	0.9320957910346085	0.9736478864765608	1.0331686314906707	1.2183755966441865	1.3050462383978165	1.3166541466031185	0.9986045820290118	1.0038443052191979	1.0	9.781540939661346	-7.444895205539487	2.6077604421446194	1.1563686264406767	0.929861074263044	0.3940480761675369	0.11343721396245182	0.30129657790165215	4.016890369758148	0.03817647247461881	0.0597497237315857	3.5900855229827423e-08	7.444895205539487	-0.22650755217763274	
APNRDQWS(ph)MTPPMVNAY(ph)Y(ph)S(ph)PTK	ddPTM_K562_Methotrexat_30min_R1	1	APNRDQWSMTPPMVNAYYSPTK	22	1	B4DKB2;A0A3B3ISF9;P42892-3;P42892-2;P42892-4;P42892	B4DKB2	ECE1	Endothelin-converting enzyme 1	4	APNRDQWS(0.5)MT(0.5)PPMVNAY(0.89)Y(0.889)S(0.61)PT(0.61)K	42.172	0.0306	0.0	885.56	726.39	1025.9	986.78	758.68	944.47	765.46	802.97	747.87	1008.9	True	False	846.6318427396042	846.4136009811112	810.5776097530116	900.2705294747863	858.4597180892582	1126.9754606267732	937.1338902864293	774.7290899722716	713.1016869364692	826.1784335591141	1.02475664862417	1.0244924904839572	0.9811168832634674	1.0896805010952526	1.0390730176665093	1.3640824001806102	1.1342996285310032	0.93772611157955	0.8631327785506105	1.0	9.690309590560132	-9.291183409973959	9.467748910188561	0.9249949724875669	1.0950276377240202	0.32901823470524894	0.10468666191144631	0.6014889474888178	184.2973001336972	0.06190593229652161	0.03008231852203055	5.114657891889975e-10	9.291183409973959	0.17003266523645333	
APPGQPAEPDAPRS(ph)SPGPGAR	ddPTM_K562_Methotrexat_30min_R1	4	APPGQPAEPDAPRSSPGPGAR	21	1	Q8IX07	Q8IX07	ZFPM1	Zinc finger protein ZFPM1	1	APPGQPAEPDAPRS(0.765)S(0.235)PGPGAR;APPGQPAEPDAPRS(0.5)S(0.5)PGPGAR;APPGQPAEPDAPRS(0.712)S(0.288)PGPGAR;APPGQPAEPDAPRS(0.869)S(0.131)PGPGAR	227.36	3.52e-51	76829000.0	2563.58	2015.44	2389.1099999999997	2355.63	2309.21	2348.83	2164.87	2032.9899999999998	2602.73	2425.94	True	False	2450.888092744021	2348.4572033774853	1887.6684601199102	2149.1155752515165	2612.911590669184	2802.7081550329635	2650.397205685969	1961.4885893902986	2481.729650393994	1986.578758160767	1.2337230943781585	1.18216164032266	0.9502107340901849	1.0818174544669101	1.3152821552810192	1.410821566232689	1.334151588402055	0.9873701615566968	1.2492480553308907	1.0	10.95607027504537	-4.539944669151943	17.224472800611743	1.180449295848229	53.088158530520346	0.0	0.15330672282928312	0.0	0.0	0.037303928655147985	0.0	2.88439896364309e-05	4.539944669151943	51.90770923467212	
APPQTHLPS(ph)GASSGTGSASATHGGGSPPGTR	ddPTM_K562_Methotrexat_30min_R1	3	APPQTHLPSGASSGTGSASATHGGGSPPGTR	31	0	P46379-3;P46379;P46379-2;P46379-5;A0A0G2JK23;A0A024RCR6;A0A0G2JL47;A0A0G2JJM1;X6REW1;F6S6P2;F6UR09;F6TC96;F6U341;F6X9W3;F6WML8;A0A1B0GX79;A0A0G2JJR8;F6XTU0;F6U1F2;F6VEM6;P46379-4	P46379-3;P46379-4	BAG6;BAT3	Large proline-rich protein BAG6	1	APPQTHLPS(0.57)GAS(0.143)S(0.143)GT(0.013)GS(0.032)AS(0.062)AT(0.006)HGGGS(0.022)PPGT(0.007)R;APPQT(0.012)HLPS(0.45)GAS(0.181)S(0.181)GT(0.029)GS(0.106)AS(0.012)AT(0.014)HGGGS(0.011)PPGT(0.004)R;APPQTHLPS(0.465)GAS(0.069)S(0.069)GT(0.026)GS(0.089)AS(0.019)AT(0.013)HGGGS(0.183)PPGT(0.067)R	63.893	0.00016966	1199520000.0	4191.92	3786.23	4811.82	4383.889999999999	4442.34	3837.64	3812.62	4865.04	4451.780000000001	5230.37	True	False	4007.648216063281	4411.840152593943	3801.8847394109916	3999.5611701283137	5026.5855750206065	4579.209616737142	4667.697087743118	4693.933785669075	4244.8177194833825	4283.099309678449	0.9356888379887117	1.0300578701559826	0.8876480474827972	0.9338007085407923	1.1735860440270705	1.0691345882150287	1.089794270517053	1.0959199043230847	0.9910621754418437	1.0	12.064439413191439	-7.734239438258267	24.999748059664157	1.0756670100383614	0.9485208084996105	0.5164889736339782	0.05818865422009578	172.7671259541975	158791.40948295215	0.01690650386678362	0.021820925735986065	1.843998492784787e-08	7.734239438258267	-0.1271462015387509	
APPQTHLPSGAS(ph)SGTGSASATHGGGSPPGTR	ddPTM_K562_Methotrexat_30min_R1	2	APPQTHLPSGASSGTGSASATHGGGSPPGTR	31	0	P46379-3;P46379;P46379-2;P46379-5;A0A0G2JK23;A0A024RCR6;A0A0G2JL47;A0A0G2JJM1;X6REW1;F6S6P2;F6UR09;F6TC96;F6U341;F6X9W3;F6WML8;A0A1B0GX79;A0A0G2JJR8;F6XTU0;F6U1F2;F6VEM6;P46379-4	P46379-3;P46379-4	BAG6;BAT3	Large proline-rich protein BAG6	1	APPQTHLPS(0.095)GAS(0.568)S(0.02)GT(0.005)GS(0.006)AS(0.076)AT(0.097)HGGGS(0.096)PPGT(0.036)R;APPQTHLPS(0.131)GAS(0.432)S(0.432)GT(0.004)GSASATHGGGSPPGTR	113.68	2.7268999999999997e-18	43081000.0	1407.7199999999998	1602.15	1543.1399999999999	1592.3600000000001	1399.53	985.1999999999999	1068.69	1169.58	1761.0	1790.94	True	False	1345.8383143563344	1866.8780556063382	1219.2560022558366	1452.7602710983904	1583.5927258626295	1175.575956684168	1308.3709367049935	1128.445208475745	1679.131494370843	1466.5834114365748	0.9176691239389064	1.272943660107037	0.8313581026131535	0.9905745965552385	1.0797836069285958	0.8015745626991964	0.8921217344354072	0.7694381374260804	1.1449273742473802	1.0	10.518243410883969	-8.247196582756645	24.92084152588067	0.9053590747440232	1.0206590878249688	0.09513623404245564	0.1450037679790759	1622.1827010738587	2838360.3142588534	0.04648865838856098	0.046263724779430755	5.65983039659105e-09	8.247196582756645	0.11530001308094562	
APPQTHLPSGASSGTGSAS(ph)ATHGGGSPPGTR	ddPTM_K562_Methotrexat_30min_R1	1	APPQTHLPSGASSGTGSASATHGGGSPPGTR	31	0	P46379-3;P46379;P46379-2;P46379-5;A0A0G2JK23;A0A024RCR6;A0A0G2JL47;A0A0G2JJM1;X6REW1;F6S6P2;F6UR09;F6TC96;F6U341;F6X9W3;F6WML8;A0A1B0GX79;A0A0G2JJR8;F6XTU0;F6U1F2;F6VEM6;P46379-4	P46379-3;P46379-4	BAG6;BAT3	Large proline-rich protein BAG6	1	APPQTHLPS(0.006)GAS(0.028)S(0.091)GT(0.003)GS(0.008)AS(0.717)AT(0.126)HGGGS(0.019)PPGT(0.002)R	115.61	1.9087e-18	83643000.0	541.82	537.01	787.29	448.05	624.63	589.55	512.02	660.23	790.56	583.57	True	False	518.0022415569497	625.7417748907152	622.0485879544285	408.7701521425016	706.7797934703603	703.4721937303607	626.8535188049766	637.0093366780736	753.8070381543517	477.8798180910821	1.083959233989288	1.3094124321681464	1.3016841565714927	0.8553827482720594	1.4789906723695345	1.4720692674162723	1.3117388411776383	1.3329906653573347	1.5773987718616713	1.0	8.900504030481668	-7.824275879163988	24.999999761758186	1.3818182654321078	1.1615800248680104	0.24954531313759054	0.18713283664853386	91.16388328237517	36269.2733357129	0.05612100283662332	0.06363525877283777	1.4987324853454927e-08	7.824275879163988	-0.22023824056409746	
APPQTHLPSGASSGTGSASAT(ph)HGGGSPPGTR	ddPTM_K562_Methotrexat_30min_R1	1	APPQTHLPSGASSGTGSASATHGGGSPPGTR	31	0	P46379-3;P46379;P46379-2;P46379-5;A0A0G2JK23;A0A024RCR6;A0A0G2JL47;A0A0G2JJM1;X6REW1;F6S6P2;F6UR09;F6TC96;F6U341;F6X9W3;F6WML8;A0A1B0GX79;A0A0G2JJR8;F6XTU0;F6U1F2;F6VEM6;P46379-4	P46379-3;P46379-4	BAG6;BAT3	Large proline-rich protein BAG6	1	APPQTHLPS(0.001)GASS(0.003)GTGS(0.003)AS(0.045)AT(0.859)HGGGS(0.068)PPGT(0.022)R	90.65899999999999	1.8318e-06	587810000.0	1513.4	1399.6	1868.1	1698.0	1792.5	1329.6	1235.1	1648.5	1665.6	1524.5	True	False	1446.872748093993	1630.8601108676644	1476.0113390969893	1549.138976315072	2028.2451688129324	1586.5263824677932	1512.102615280705	1590.5213206213057	1588.166619548028	1248.3982772929621	1.1589832943629215	1.3063620324789584	1.182324075532678	1.2409012448128642	1.6246779619169271	1.2708495448327846	1.2112341412065721	1.2740495958310727	1.272163418065445	1.0	10.285862556209503	-11.071490836864307	0.8327452607431598	0.9929108205348111	1.2918946837412102	0.3241859546678424	0.12244332310538829	9.135533206164684	5.935162765788596	0.34194459796144455	0.042635321144027516	8.482212787992516e-12	11.071490836864307	0.29898386320639914	
APPQTHLPSGASSGTGSASATHGGGS(ph)PPGTR	ddPTM_K562_Methotrexat_30min_R1	4	APPQTHLPSGASSGTGSASATHGGGSPPGTR	31	0	P46379-3;P46379;P46379-2;P46379-5;A0A0G2JK23;A0A024RCR6;A0A0G2JL47;A0A0G2JJM1;X6REW1;F6S6P2;F6UR09;F6TC96;F6U341;F6X9W3;F6WML8;A0A1B0GX79;A0A0G2JJR8;F6XTU0;F6U1F2;F6VEM6;P46379-4	P46379-3;P46379-4	BAG6;BAT3	Large proline-rich protein BAG6	1	APPQTHLPS(0.004)GAS(0.259)S(0.186)GT(0.013)GS(0.117)AS(0.023)AT(0.052)HGGGS(0.275)PPGT(0.071)R;APPQTHLPS(0.055)GAS(0.01)S(0.01)GT(0.003)GS(0.009)AS(0.032)AT(0.057)HGGGS(0.612)PPGT(0.211)R;APPQTHLPS(0.006)GAS(0.018)S(0.021)GT(0.011)GS(0.077)AS(0.047)AT(0.077)HGGGS(0.566)PPGT(0.178)R;APPQTHLPSGASSGTGSAS(0.001)AT(0.03)HGGGS(0.912)PPGT(0.057)R	143.93	1.2831e-30	1854480000.0	5485.110000000001	5394.86	6778.34	5723.37	5802.25	5196.18	4968.02	6339.299999999999	6262.15	6708.98	True	False	5243.991132085266	6286.268918059115	5355.659065496857	5221.6110382051775	6565.347576426682	6200.268244623574	6082.224949208044	6116.343225850553	5971.024013330143	5493.9187106546	0.9545083224321034	1.1442231400089475	0.9748340569929421	0.9504347103059018	1.195020880759341	1.128569345702025	1.107083171327693	1.113293360891718	1.0868424393958127	1.0	12.423619848770231	-7.754375395665877	24.999910670159377	1.1120686751043596	1.0136470028892477	0.3319085494325503	0.0681360612982986	197.99926904092732	700728.6091075129	0.02002277312216905	0.025282154765421415	1.7604536867824283e-08	7.754375395665877	-0.09842167221511189	
APQQQPPPQQPPPPQPPPQQPPPPPS(ph)YSPAR	ddPTM_K562_Methotrexat_30min_R1	1	APQQQPPPQQPPPPQPPPQQPPPPPSYSPAR	31	0	M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;Q9BUJ2-5	M0R3F1	HNRNPUL1	Heterogeneous nuclear ribonucleoprotein U-like protein 1	1	APQQQPPPQQPPPPQPPPQQPPPPPS(0.585)Y(0.005)S(0.409)PAR	106.89	4.2356e-14	12761000.0	410.48	468.38	423.41	309.5	365.45	398.48	277.54	485.03	483.88	465.17	True	False	392.4357906948741	545.7718339012551	334.5420272400066	282.36661552974937	413.51308058169354	475.48062040144885	339.78540996276155	467.97121998237895	461.3845244157658	380.9232054105396	1.0302228510125204	1.432760793118524	0.8782400822219645	0.7412691364534462	1.0855549746202262	1.248232225414044	0.8920050160676302	1.2285185395256335	1.2112271393876073	1.0	8.573356367702115	-9.302528895024194	24.9818995493353	1.1649046136982772	1.0504195489586208	0.05310761888024407	0.19252482524935405	1681.2763781317544	1022185.5068736019	0.10999417664561746	0.052840014358610514	4.982773028583071e-10	9.302528895024194	-0.11448506473965647	
APQTSS(ph)S(ph)PPPVR	ddPTM_K562_Methotrexat_30min_R1	1	APQTSSSPPPVR	12	0	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2;M0R088	A9Z1X7;M0R088	SRRM1	Serine/arginine repetitive matrix protein 1	2	APQT(0.145)S(0.515)S(0.747)S(0.593)PPPVR	100.04	0.014173	11556000.0	1460.8	1277.5	1523.4	1392.6	1113.3	1272.3	1066.2	1370.0	1400.4	1629.2	True	False	1396.5849811125322	1488.5851612128047	1203.6591584927753	1270.512920150983	1259.718463843479	1518.1539684219129	1305.3224908204102	1321.8163234766077	1335.2957096632188	1334.1360927292196	1.0468084843245353	1.1157671015163313	0.9022011810133028	0.9523113324607809	0.9442203615573387	1.1379303630983035	0.978402801583858	0.9907657327316515	1.0008691893880384	1.0	10.381690125315808														
APQTSS(ph)SPPPVR	ddPTM_K562_Methotrexat_30min_R1	2	APQTSSSPPPVR	12	0	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2;M0R088	A9Z1X7;M0R088	SRRM1	Serine/arginine repetitive matrix protein 1	1	APQT(0.006)S(0.05)S(0.472)S(0.472)PPPVR;APQT(0.013)S(0.147)S(0.494)S(0.346)PPPVR	159.58	4.4155000000000003e-07	217145500.0	4889.4	4236.9	5782.700000000001	5406.6	4373.5	4378.8	4565.9	4661.2	4626.5	5468.299999999999	True	False	4674.467830402254	4936.975710013728	4568.990295271214	4932.611772288023	4948.691908397967	5224.941127820378	5589.919302979654	4497.262954006689	4411.415024819252	4477.937881089607	1.0438884938852313	1.1025109863320444	1.0203335590174492	1.1015364445135583	1.1051274135124476	1.166818581804222	1.2483244411643046	1.004315618802729	0.9851443101631039	1.0	12.128618799617767	-9.483406399854411	24.996813761278744	0.9932912813584387	1.1112352604514504	0.4480630564563123	0.05916123832471867	495.40702706996495	313729.72638908424	0.03507369913184956	0.01684448030396835	3.2854404524146344e-10	9.483406399854411	0.11794397909301169	
APQTSSS(ph)PPPVR	ddPTM_K562_Methotrexat_30min_R1	5	APQTSSSPPPVR	12	0	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2;M0R088	A9Z1X7;M0R088	SRRM1	Serine/arginine repetitive matrix protein 1	1	APQT(0.003)S(0.01)S(0.034)S(0.952)PPPVR;APQT(0.009)S(0.004)S(0.032)S(0.955)PPPVR;APQT(0.01)S(0.01)S(0.079)S(0.901)PPPVR;APQT(0.023)S(0.009)S(0.077)S(0.892)PPPVR;APQT(0.004)S(0.013)S(0.041)S(0.943)PPPVR	160.46	1.8506e-07	1230815000.0	13051.300000000001	12886.5	15563.099999999999	14851.9	12577.800000000001	11244.359999999999	11752.14	12427.4	13019.1	14507.800000000001	True	False	12477.580479185366	15015.775091952099	12296.61799234534	13549.85698606231	14232.001162786775	13417.173431081192	14387.856553432917	11990.321298082621	12413.844882659532	11880.296836543681	1.0502751447088803	1.2639225516456556	1.0350429927408091	1.1405318547582985	1.1979499635909159	1.1293634844047071	1.2110687764278756	1.0092610869116085	1.0449103295529336	1.0	13.536283262763844	-9.276658296835198	24.586585737713165	1.0203142579589215	1.1481259673467008	0.44311199079297237	0.06615522212182576	610.730943211522	986646.7972309935	0.03387922658619319	0.016387519986945747	5.288611964347787e-10	9.276658296835198	0.1278117093877793	
APQTSSS(ph)PPPVRR	ddPTM_K562_Methotrexat_30min_R1	1	APQTSSSPPPVRR	13	1	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2;M0R088	A9Z1X7;M0R088	SRRM1	Serine/arginine repetitive matrix protein 1	1	APQT(0.001)S(0.054)S(0.2)S(0.744)PPPVRR	86.214	0.019837	79213000.0	2016.2	1685.7	1931.2	2277.9	1880.7	1806.4	1742.7	2276.3	1974.7	2013.0	True	False	1927.5702621297146	1964.2332729991585	1525.867511409509	2078.200043667906	2128.04501477628	2155.4612344237553	2133.544836571684	2196.241238780879	1882.8966280148236	1648.426193631179	1.1693397433121544	1.191580964066286	0.925651095150523	1.2607176782904754	1.2909555932793018	1.3075873477087083	1.294292000949025	1.3323260982300726	1.142238964225113	1.0	10.686873578121094	-7.396974011861246	20.21124911373414	1.2545959039160963	1.103099022269244	0.21255416177872377	0.1152990168446281	5.0923308699140595	799.9315663154059	0.031141551759459766	0.04619036264523848	4.008907061696841e-08	7.396974011861246	-0.15149688164685227	
APRPKRAT(ph)AS(ph)ALGT(ph)ESPR	ddPTM_K562_Methotrexat_30min_R1	1	APRPKRATASALGTESPR	18	3	H3BMV0	H3BMV0	C16orf92		3	APRPKRAT(1)AS(0.999)ALGT(0.824)ES(0.177)PR	56.768	0.026452	0.0	298.1	298.82	483.51	397.33	309.56	191.34	454.28	239.93	337.65	420.81	True	False	284.9958809348617	348.1949259284624	382.0278585551013	362.4966957946218	350.2725659457355	228.31374700766224	556.1638539954002	231.49152590638147	321.95272519836203	344.5972312677279	0.8270405420449819	1.0104402889352855	1.1086213814013277	1.0519431466731295	1.0164694726569008	0.662552470801132	1.613953344747857	0.6717741899862474	0.9342870342107517	1.0	8.428767299775295														
APS(ph)DSSLGTPSDGRPELR	ddPTM_K562_Methotrexat_30min_R1	1	APSDSSLGTPSDGRPELR	18	1	M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;Q15642;M0R2H7;Q15642-5	M0R0F9	TRIP10	Cdc42-interacting protein 4	1	APS(0.947)DS(0.026)S(0.026)LGTPSDGRPELR	139.78	6.2141999999999995e-09	197690000.0	1352.5	1275.1	1865.8	1415.2	1346.8	1367.3	1172.3	1926.2	1477.5	1504.6	True	False	1293.0457194377732	1485.7886020058297	1474.1940776656286	1291.1316132397465	1523.9278066149272	1631.5113739081028	1435.2181166655096	1858.454454219447	1408.8113474917216	1232.102360127905	1.0494629028253315	1.205897050510957	1.1964866924795046	1.0479093742712364	1.236851625263284	1.3241686946681401	1.1648529887699581	1.5083604368930192	1.1434207035732584	1.0	10.266906401339806	-7.924331375399833	8.929192153323124	1.2586758073646516	1.1361135712994628	0.10564223314148169	0.13395530938021785	0.5406322952024989	58.17666888557179	0.039415744252180376	0.04472795229905603	1.1903334131660243e-08	7.924331375399833	-0.12256223606518879	
APS(ph)LEDGSDAFMSPQDVR	ddPTM_K562_Methotrexat_30min_R1	1	APSLEDGSDAFMSPQDVR	18	0	E9PJ68;O75387;O75387-2	E9PJ68	SLC43A1	Large neutral amino acids transporter small subunit 3	1	APS(0.993)LEDGS(0.007)DAFMSPQDVR	89.374	0.0036552	9950300.0	656.22	616.62	614.11	539.73	456.9	601.48	502.79	540.57	686.44	917.64	True	False	627.373354535642	718.5059742520863	485.2167033097008	492.4127088848847	516.9903585108111	717.7074973877319	615.5534563492722	521.5578467020073	654.5275542282353	751.4465038865952	0.8348875818714597	0.9561638393895833	0.6457102412481613	0.655286445991899	0.6879935641950007	0.9551012529509951	0.8191580547191801	0.6940718254785019	0.8710234871583268	1.0	9.553526590889545	-8.243886026046614	24.91818540849588	0.8457058729562933	0.7554047594282656	0.1777553269497233	0.11547088477050176	1878.889953619933	2667214.8425862393	0.040880953855469256	0.04078883810772448	5.703139228212415e-09	8.243886026046614	-0.09030111352802772	
APS(ph)LTDLVK	ddPTM_K562_Methotrexat_30min_R1	2	APSLTDLVK	9	0	O15014	O15014	ZNF609	Zinc finger protein 609	1	APS(0.996)LT(0.004)DLVK;APS(0.996)LT(0.004)DLVK	80.737	0.030751	89055000.0	3881.3999999999996	2888.1	5676.6	4672.7	2997.0	2752.3	2586.8999999999996	3715.7	3869.6	4260.700000000001	True	False	3710.7783034571335	3365.3094356937	4485.159235328928	4263.0516458347665	3391.1580312035485	3284.143022312054	3167.0781762364622	3585.0167249211895	3689.7031406118213	3489.0459429728603	1.0635510005051252	0.9645357185598622	1.285497327532272	1.2218387821521233	0.9719442181704533	0.941272507152423	0.9077203992154762	1.027506310755701	1.057510620644906	1.0	11.768616879403522	-7.782103221244002	24.978046306751278	0.9797180197594949	1.1325929643050368	0.40140691484795055	0.08934401135817095	261.16371831707403	315687.92448841716	0.0303645928609579	0.03446722601536906	1.651569213711763e-08	7.782103221244002	0.15287494454554185	
APS(ph)PASFQR	ddPTM_K562_Methotrexat_30min_R1	4	APSPASFQR	9	0	A0A3F2YNW7;Q8NFD5;Q8NFD5-2;Q8NFD5-3;A0A1B0GV63;A0A1B0GWJ2;A0A1B0GTJ8;A0A1B0GVK1;H0Y7H8;Q8NFD5-4	A0A3F2YNW7	ARID1B	AT-rich interactive domain-containing protein 1B	1	APS(0.978)PAS(0.022)FQR;APS(0.998)PAS(0.002)FQR;APS(0.995)PAS(0.005)FQR;APS(0.994)PAS(0.006)FQR	128.51	0.0016625	95237000.0	4527.51	4194.28	5409.0599999999995	5178.21	4465.63	3996.7599999999998	4000.55	4679.7	4924.89	5492.98	True	False	4328.486081487404	4887.3134794298585	4273.772225178502	4724.244368989674	5052.938618246078	4769.077304747275	4897.775174124546	4515.112298520791	4695.932938848395	4498.14809393552	0.9622818082230646	1.0865168014408015	0.9501181677278422	1.0502643021822649	1.1233375408556547	1.0602312785515058	1.0888425796224472	1.0037713752928996	1.043970283054827	1.0	12.135115444859457	-6.242805284539921	23.766528734574358	1.0468038180167627	0.9622816618543009	0.21302578542732287	0.047741590661963	3229.639712189157	4119063.537263231	0.012089963179841566	0.3589687276881975	5.717349159459692e-07	6.242805284539921	-0.08452215616246184	
APS(ph)PPLSQVFQTR	ddPTM_K562_Methotrexat_30min_R1	1	APSPPLSQVFQTR	13	0	B1AKL4;Q9NRA8-2;Q9NRA8;Q9NRA8-3	B1AKL4	EIF4ENIF1	Eukaryotic translation initiation factor 4E transporter	1	APS(0.988)PPLS(0.012)QVFQTR	120.92	0.0012096	10008000.0	622.89	504.14	562.31	625.21	388.8	339.3	351.45	555.44	640.06	426.09	True	False	595.5085014274264	587.4405660851849	444.2888154208168	570.3988100011464	439.9340148588385	404.8649229627876	430.2716088902956	535.9048603736112	610.3037503049411	348.9209721034819	1.706714554408648	1.6835920252766106	1.2733221873778655	1.6347507189449744	1.260841422648462	1.1603341596867787	1.2331491750019743	1.5358918013522964	1.7491174194136405	1.0	8.446756503960449	-6.749035463188286	24.31690491020912	1.3702567215683157	1.6951536774996494	0.28291232542396316	0.21506251347577385	220.60422463972063	432466.0984003156	0.05575050457970275	0.14508236228066368	1.7822332296717443e-07	6.749035463188286	0.3248969559313337	
APS(ph)PPVEHPR	ddPTM_K562_Methotrexat_30min_R1	2	APSPPVEHPR	10	0	Q86WR7-2;Q86WR7	Q86WR7-2	PROSER2	Proline and serine-rich protein 2	1	APS(1)PPVEHPR;APS(1)PPVEHPR	101.89	0.0041467	29182000.0	737.76	629.97	953.4100000000001	1000.73	722.85	833.3	847.5	734.42	847.66	1098.31	True	False	705.3289537688808	734.0618348408854	753.3022701185487	912.9975546335583	817.9174450635581	994.3234314909841	1037.5734486684457	708.5900323267809	808.2524716174834	899.3954161584999	0.7842256488047089	0.8161725328512482	0.8375651649816667	1.0151236466527214	0.9094080649833077	1.1055464744727532	1.1536343526189319	0.787851505129204	0.8986619868152025	1.0	9.8128117209884	-7.1603348095291715	4.233560575286325	0.9819231103040711	0.805785693968938	0.38367123345320886	0.09847231492955578	0.26497353610311064	8.18654471490181	0.029462092539355948	0.05324010197191246	6.912978249807544e-08	7.1603348095291715	-0.17613741633513313	
APS(ph)PTAEQPPGGGDSAR	ddPTM_K562_Methotrexat_30min_R1	1	APSPTAEQPPGGGDSAR	17	0	Q15742-2;Q15742-3;Q15742	Q15742-2	NAB2	NGFI-A-binding protein 2	1	APS(0.996)PT(0.004)AEQPPGGGDSAR	146.67	8.6493e-10	22942000.0	620.54	509.44	756.97	525.71	577.07	700.32	394.56	501.4	625.2	748.94	True	False	593.2618046136159	593.6163010005884	598.0923416071128	479.6218205174301	652.9648198420524	835.6469285272602	483.0501237836248	483.76547780377473	596.1345884614714	613.2997086230181	0.9673277131430711	0.967905728071153	0.9752040204779341	0.7820349720926464	1.0646749226541954	1.362542516779368	0.7876249034394132	0.7887913054612827	0.9720118566498492	1.0	9.2604484553331														
APS(ph)PTAEQPPGGGDSARR	ddPTM_K562_Methotrexat_30min_R1	3	APSPTAEQPPGGGDSARR	18	1	Q15742-2;Q15742-3;Q15742	Q15742-2	NAB2	NGFI-A-binding protein 2	1	APS(0.564)PT(0.436)AEQPPGGGDSARR;APS(0.954)PT(0.046)AEQPPGGGDSARR;APS(0.976)PT(0.023)AEQPPGGGDSARR	98.421	0.00087131	53737800.0	2811.9900000000002	2470.4900000000002	2987.3900000000003	3223.33	2574.57	2372.0099999999998	2419.98	2789.6	2480.39	2941.4	True	False	2688.3782865817548	2878.696481350001	2360.377664099863	2940.7456634426753	2913.171081880453	2830.367361971594	2962.722117178369	2691.4881868396683	2365.077210291027	2408.6839572512436	1.1161191481715578	1.1951325007516258	0.9799449433762547	1.2208931165874553	1.2094451300306426	1.1750679674894209	1.2300169593687111	1.1174102682658114	0.9818960279828575	1.0	11.234029395043043	-9.672540003908267	4.159852194614794	0.9899376305391234	1.1607524930036486	0.4855233667717366	0.06879950603300797	0.18587900416313377	5.716806612300138	0.05522982737385012	0.01813262653530957	2.1254945517893605e-10	9.672540003908267	0.17081486246452515	
APS(ph)TPVPPSPAPAPGLTKR	ddPTM_K562_Methotrexat_30min_R1	2	APSTPVPPSPAPAPGLTKR	19	1	F8W126;Q96EZ8-3;F8W0I9;F8VVA6;F8VP44;Q96EZ8;Q96EZ8-2	F8W126	MCRS1	Microspherule protein 1	1	APS(0.541)T(0.459)PVPPSPAPAPGLTKR;APS(0.521)T(0.479)PVPPSPAPAPGLTKR	75.773	0.0078739	19074700.0	4292.8	3049.3	6124.0	4499.3	3610.0	3532.1	2951.94	4050.9	3879.3	5053.8	True	False	4104.093652053582	3553.1449957621985	4838.656089411681	4104.853354613899	4084.7782758240933	4214.628335976608	3613.987688569123	3908.4275509280224	3698.9521897290233	4138.50784767673	0.9916843952241223	0.8585570274457394	1.1691789088011513	0.9918679644206246	0.9870171632312357	1.0183932207214756	0.8732586288553102	0.9444050113671114	0.8937888547935304	1.0	12.01489497779838	-8.745432678669427	24.986613800124687	0.9232302005019883	1.002578061270998	0.18509538701718675	0.07676553616498676	397.1151839104016	619901.2190822489	0.029247068873306994	0.022580309486605825	1.7970796294538655e-09	8.745432678669427	0.07934786076900968	
APSAS(ph)PLALHASR	ddPTM_K562_Methotrexat_30min_R1	1	APSASPLALHASR	13	0	Q8N3F8;H0Y6J8	Q8N3F8	MICALL1	MICAL-like protein 1	1	APS(0.17)AS(0.83)PLALHASR	87.419	0.015639	28606000.0	1407.8	1284.4	1384.3	1652.3	1216.4	1161.4	1291.9	1823.6	1832.8	2461.3	True	False	1345.914797652123	1496.6252689328583	1093.7543475788034	1507.4454243612436	1376.3779209729719	1385.8241129648738	1581.6414611619664	1759.4629543736805	1747.5935280425228	2015.5347195153613	0.6677705844609566	0.7425450201585831	0.542662121862033	0.7479133997372723	0.6828847489682164	0.6875714417353711	0.7847254854246692	0.8729509530834311	0.8670619816773658	1.0	10.97694691986855	-9.414996342880805	0.7516689523538694	0.9910334181984246	0.6651200716913805	0.7949572841270269	0.05542433128632549	0.26911985494944823	0.29861908439841284	0.05061420431270833	0.022382392057812842	3.8459502064029067e-10	9.414996342880805	-0.32591334650704407	
APSDS(ph)S(ph)LGTPSDGRPELR	ddPTM_K562_Methotrexat_30min_R1	1	APSDSSLGTPSDGRPELR	18	1	M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;Q15642;M0R2H7;Q15642-5	M0R0F9	TRIP10	Cdc42-interacting protein 4	2	APS(0.105)DS(0.9)S(0.989)LGT(0.006)PSDGRPELR	85.054	0.016208	21363000.0	2752.4	2428.3	2228.0	2235.0	2142.2	1747.5	1952.2	3025.9	2599.1	3217.1	True	False	2631.407791630704	2829.535300957381	1760.3732474214926	2039.0610200613576	2423.936848329741	2085.1796430223158	2390.0305445316108	2919.477381903553	2478.2684083016798	2634.45201566362	0.9988444564505955	1.0740508022669828	0.6682123025793861	0.7739981627821438	0.9200914778169342	0.7915041270915151	0.9072211337770602	1.1081915193540297	0.9407149545965074	1.0	11.363287187131274	-9.058798709896717	7.756749791696953	1.0170642004837067	0.8673031941094431	0.24312517092389507	0.11461109282156126	0.45977580059049455	54.748805805682224	0.05716353286325622	0.0330973322757434	8.7337607356549e-10	9.058798709896717	-0.1497610063742636	
APSDS(ph)SLGTPSDGRPELR	ddPTM_K562_Methotrexat_30min_R1	3	APSDSSLGTPSDGRPELR	18	1	M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;Q15642;M0R2H7;Q15642-5	M0R0F9	TRIP10	Cdc42-interacting protein 4	1	APS(0.039)DS(0.687)S(0.192)LGT(0.059)PS(0.023)DGRPELR;APS(0.116)DS(0.441)S(0.441)LGT(0.001)PSDGRPELR;APS(0.155)DS(0.514)S(0.332)LGTPSDGRPELR	173.77	3.7322e-11	70739000.0	2799.0199999999995	2797.48	3064.3500000000004	2572.31	2657.81	2481.4900000000002	2564.51	3229.2	3210.09	3309.6400000000003	True	False	2675.978432251914	3259.716020970332	2421.1848118204894	2346.799576068917	3007.358600905271	2961.002822525575	3139.6666487843277	3115.6272056720163	3060.853616561558	2710.232124932685	0.9873613435669751	1.2027442192064248	0.893349610000887	0.865903534416708	1.109631375570816	1.0925273873355472	1.1584493519581127	1.1495794684927219	1.1293695430746844	1.0	11.404200704930448	-7.951504566341486	24.992680128561606	1.116664954026967	0.9949813178053639	0.27612627844924365	0.09348668717450014	158.8208281781266	81849.33244354597	0.030318768707745736	0.03437824735505231	1.1181380679828772e-08	7.951504566341486	-0.12168363622160316	
APSDS(ph)SLGTPSDGRPELRGPGR	ddPTM_K562_Methotrexat_30min_R1	1	APSDSSLGTPSDGRPELRGPGR	22	2	M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;Q15642;M0R2H7;Q15642-5	M0R0F9	TRIP10	Cdc42-interacting protein 4	1	APS(0.344)DS(0.484)S(0.17)LGT(0.001)PSDGRPELRGPGR	54.869	0.017644999999999997	18127000.0	950.46	863.6	987.03	1083.3	669.61	919.28	980.58	996.89	587.78	1033.0	True	False	908.6789164486703	1006.2952213098854	779.8658915630324	988.328770931754	757.6754518766124	1096.9178496352238	1200.5000263071438	961.8288136573688	560.4542360938636	845.9136900253399	1.0741981447557023	1.189595620895722	0.9219213505572549	1.1683565150744255	0.895688840139135	1.2967254964302148	1.4191755500152528	1.1370294924870605	0.6625430498436252	1.0	9.724366660064815	-9.739253829286557	24.555965034028542	0.831271680604803	1.139984650352777	0.354041731124354	0.16561664596589332	184.26581550881517	203955.2612517787	0.11525091387889248	0.04347848371367578	1.8228300132551024e-10	9.739253829286557	0.308712969747974	
APSGHLAPS(ph)PPAFDGELDLQR	ddPTM_K562_Methotrexat_30min_R1	1	APSGHLAPSPPAFDGELDLQR	21	0	G3V452;G3V2W3;G3V2E3;G3V4M7;G3V3F2;G3V2Q8;Q9P2Y4	G3V452	ZNF219	Zinc finger protein 219	1	APS(0.179)GHLAPS(0.821)PPAFDGELDLQR	60.38399999999999	0.016537	12570000.0	843.93	810.41	828.51	885.13	618.74	628.95	774.52	933.19	869.07	1263.2	True	False	806.8318476932496	944.3164778852986	654.617073259058	807.5320271529797	700.1151552308582	750.48568611095	948.2258259146727	900.369178762873	828.6671253906126	1034.4222393417313	0.7799830833168166	0.9128926679749532	0.6328335261581697	0.7806599630600206	0.6768175785512752	0.7255119404514465	0.916671925497357	0.8704077933744302	0.8010917533230397	1.0	10.014609482172629	-8.760251985813378	24.997948559919404	0.8862435297250875	0.7513318100265292	0.4206934721430696	0.08331378055355353	34.8317569683591	733330.8462123891	0.03339143483476276	0.024392907285146134	1.7367928165390138e-09	8.760251985813378	-0.1349117196985583	
APSLEDGS(ph)DAFMSPQDVR	ddPTM_K562_Methotrexat_30min_R1	1	APSLEDGSDAFMSPQDVR	18	0	E9PJ68;O75387;O75387-2	E9PJ68	SLC43A1	Large neutral amino acids transporter small subunit 3	1	APS(0.02)LEDGS(0.861)DAFMS(0.119)PQDVR	91.09299999999999	0.0030385	25857000.0	1492.1	963.34	1572.1	1229.7	1247.3	1102.1	1228.9	1721.0	1261.7	1561.8	True	False	1426.5090705900936	1122.5155610197608	1242.1376940176526	1121.8941102324177	1411.3418125859803	1315.0652272245459	1504.512107455638	1660.471454527915	1203.0438423893777	1278.9428858485733	1.1153813718926242	0.8776901403810353	0.9712221771291213	0.8772042306549488	1.1035221574023306	1.0282439050059735	1.1763716144817526	1.2983155642843263	0.9406548609019105	1.0	10.320736123437662	-7.782994961790531	24.22012105043141	1.1072128597213118	0.9552433208241058	0.2400556987518484	0.11171086729065412	206.85862660885775	232427.37301899114	0.03416960595043	0.038784370973408144	1.6481815118134212e-08	7.782994961790531	-0.151969538897206	
APSPAPS(ph)SVPLGSEKPSNVSQDR	ddPTM_K562_Methotrexat_30min_R1	3	APSPAPSSVPLGSEKPSNVSQDR	23	1	O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7	O75179-4	ANKRD17	Ankyrin repeat domain-containing protein 17	1	APS(0.376)PAPS(0.615)S(0.009)VPLGSEKPSNVSQDR;APS(0.292)PAPS(0.354)S(0.354)VPLGSEKPSNVSQDR;APS(0.018)PAPS(0.491)S(0.491)VPLGSEKPSNVSQDR	152.5	6.9331e-22	612036000.0	7176.700000000001	5091.4	9088.2	6426.4	5494.7	4605.45	4361.900000000001	6170.1	6343.900000000001	7304.400000000001	True	False	6861.220861137945	5932.667310997165	7180.711017601445	5863.007489629669	6217.349360712091	5495.388032593485	5340.167110025837	5953.094085754026	6048.97347367359	5981.502378916838	1.1470731643143492	0.9918356518436232	1.2004861927183192	0.9801897781224946	1.0394293886142298	0.9187303932141241	0.8927802367593245	0.9952506425036387	1.0112799578571714	1.0	12.546292177511365	-7.385435843073084	8.808634018941518	0.9726698763589623	1.1008401598450737	0.48761487766992306	0.06360443964473031	0.28054554928144554	18.81251412500454	0.017884799169824203	0.026545974226576143	4.116841595875783e-08	7.385435843073084	0.12817028348611137	
APSPT(ph)AEQPPGGGDSAR	ddPTM_K562_Methotrexat_30min_R1	2	APSPTAEQPPGGGDSAR	17	0	Q15742-2;Q15742-3;Q15742	Q15742-2	NAB2	NGFI-A-binding protein 2	1	APS(0.033)PT(0.967)AEQPPGGGDSAR;APS(0.396)PT(0.604)AEQPPGGGDSAR	161.48	1.8543e-08	18724400.0	762.37	689.24	1030.6599999999999	670.36	759.11	1045.71	543.8399999999999	1150.13	754.81	973.48	True	False	728.8571276360625	803.125194923142	814.3385508022602	611.5905796010431	858.9462706262677	1247.7786577996374	665.8099638039504	1109.67927600011	719.7190478512532	797.1733387859318	0.9143019368235362	1.007466200696419	1.0215325967153774	0.7671989890335207	1.0774899621384906	1.5652538752738046	0.8352135368926871	1.3920175475137115	0.9028388342080796	1.0	9.638749650272166	-7.991683659409968	24.881456291363573	1.1642192364952655	0.9378241368189838	0.17441850547154036	0.21395715294842776	287.3428161320024	859686.7897587209	0.06273756040224014	0.07102520561649935	1.0193336014507651e-08	7.991683659409968	-0.22639509967628169	
APTAALPQGVVMAAS(ph)PGSLHSPQQLAEEATR	ddPTM_K562_Methotrexat_30min_R1	3	APTAALPQGVVMAASPGSLHSPQQLAEEATR	31	0	E9PAR2;Q03060-22;Q03060-15;Q03060-16;Q03060-31;Q03060-20;Q03060-21;Q03060-32;Q03060-26;Q03060-29;Q03060-7;Q03060-12;G5E998;C9IYM9;C9K092;J3KR46;Q03060;Q03060-6;Q03060-2;Q03060-23;Q03060-9;Q03060-11;Q03060-24;Q03060-27;Q03060-8;E9PB41;Q03060-10;Q03060-28;Q03060-19;Q03060-14;Q03060-13;Q03060-17;Q03060-30;Q03060-1	E9PAR2	CREM	cAMP-responsive element modulator	1	APTAALPQGVVMAAS(0.997)PGS(0.003)LHSPQQLAEEATR;APTAALPQGVVMAAS(0.915)PGS(0.083)LHS(0.002)PQQLAEEATR;APTAALPQGVVMAAS(0.736)PGS(0.26)LHS(0.004)PQQLAEEATR	105.25	7.0639e-13	81711000.0	4689.799999999999	3366.2799999999997	4562.799999999999	4886.4	3493.05	3707.8399999999997	3900.7000000000003	4370.5	4743.599999999999	5231.3	True	False	4483.642007407963	3922.5005530234353	3605.1306343513406	4458.016898625424	3952.447300932784	4424.327603767588	4775.531269877298	4216.787037777017	4523.071071378496	4283.860877666565	1.0466357651302205	0.9156461110753988	0.8415610911050567	1.040653986189608	0.9226367087545795	1.0327897497403173	1.114772726344593	0.9843426661591113	1.0558398604770352	1.0	12.06469591265884	-8.318329388679459	7.055343686688285	1.0418650058580385	0.950024320265524	0.2954186153290208	0.06471434070361214	0.3234922607225602	34.410867705668814	0.022822028187169583	0.020163781295967183	4.804747962913467e-09	8.318329388679459	-0.09184068559251457	
APVAS(ph)PAALGSTATASPAAPAR	ddPTM_K562_Methotrexat_30min_R1	1	APVASPAALGSTATASPAAPAR	22	0	A0A0C4DFM2;Q6ZN55;Q6ZN55-2	A0A0C4DFM2	ZNF574	Zinc finger protein 574	1	APVAS(1)PAALGSTATASPAAPAR	137.95	8.604799999999999e-13	10728000.0	1082.5	957.75	1593.0	1293.1	1191.7	1002.8	1001.6	1265.5	1396.3	1932.8	True	False	1034.9145961489023	1116.0019085335136	1258.6510696330504	1179.7359306672668	1348.4294380331223	1196.576907595295	1226.2342963850335	1220.991647707772	1331.3863177683188	1582.7511907850694	0.6538706792162124	0.7051025549884181	0.7952298990271109	0.7453704268464958	0.8519528817187496	0.756010745442418	0.7747486171700823	0.7714362527834466	0.8411848466895989	1.0	10.628218765637472	-15.999999999997797	0.10885104292696403	1.7428778838692627	0.6315644316664122	0.7685285897697066	0.04304454431974191	87.3469166334246	0.6328062013736936	14.506039724025413	0.5957045428178003	1.0000000000050719e-16	15.999999999997797	-1.1113134522028505	
APVASPAALGSTATAS(ph)PAAPAR	ddPTM_K562_Methotrexat_30min_R1	1	APVASPAALGSTATASPAAPAR	22	0	A0A0C4DFM2;Q6ZN55;Q6ZN55-2	A0A0C4DFM2	ZNF574	Zinc finger protein 574	1	APVASPAALGS(0.015)T(0.037)AT(0.002)AS(0.946)PAAPAR	235.98	1.0954999999999999e-63	11055000.0	2423.8	1963.2	2730.2	2362.2	2305.2	2159.1	2423.2	2290.1	2625.8	2401.4	True	False	2317.2526541761727	2287.5854313056575	2157.168330390556	2155.109593552098	2608.374205382188	2576.3155177393314	2966.664284145581	2209.555884958963	2503.7271311294503	1966.4831899582286	1.1783739957753694	1.1632875597346193	1.0969675924035627	1.0959206793920655	1.3264157144600834	1.3101131659274732	1.5086141083202433	1.1236078173675603	1.2732003730897052	1.0	10.941402138439704	-7.758853811053221	24.99946677692116	1.2784094361339537	1.1331360331725753	0.17120811736753472	0.12784958472884947	103.58747348939735	1001563.2291068359	0.037859477806065606	0.046632343506814306	1.742393286031064e-08	7.758853811053221	-0.14527340296137847	
APVHFVEPLS(ph)PTGVAGHR	ddPTM_K562_Methotrexat_30min_R1	2	APVHFVEPLSPTGVAGHR	18	0	Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3	Q5T5Y3-2	CAMSAP1	Calmodulin-regulated spectrin-associated protein 1	1	APVHFVEPLS(0.789)PT(0.211)GVAGHR;APVHFVEPLS(0.835)PT(0.165)GVAGHR	120.41	0.00010923	203511000.0	4242.299999999999	3881.1	4495.4	3868.6	3633.1	3266.1	3462.5	4504.6	4077.5	4503.0	True	False	4055.813571586591	4522.385807579663	3551.876973275841	3529.445844388978	4110.916330719254	3897.227600615267	4239.0537652088415	4346.170664768413	3887.937914989844	3687.4630650378567	1.0998926633438573	1.2264219946927752	0.963230522076938	0.9571474431440152	1.1148359341402787	1.0568858675673967	1.1495854169770028	1.1786343586668018	1.0543666055540353	1.0	11.8484128835416	-8.734404968327455	24.853476375035875	1.1105328394538954	1.0689490470440155	0.009753676442064818	0.08556719582602675	761.1083153393123	699707.6691346222	0.03431468918520608	0.026572137314481686	1.843295792087291e-09	8.734404968327455	-0.04158379240987986	
APVPEPGLDLS(ph)LSPRPDS(ph)PQPR	ddPTM_K562_Methotrexat_30min_R1	1	APVPEPGLDLSLSPRPDSPQPR	22	1	Q8TAP8	Q8TAP8	PPP1R35	Protein phosphatase 1 regulatory subunit 35	2	APVPEPGLDLS(0.796)LS(0.208)PRPDS(0.997)PQPR	74.471	0.009183499999999999	58160000.0	2278.1	1920.8	2775.5	2148.5	1820.0	2001.7	1948.9	2597.4	2204.1	2664.5	True	False	2177.9574517199194	2238.17955198243	2192.9604794516854	1960.1443407614431	2059.361900830982	2388.5001953864203	2385.9904355279464	2506.0479697796654	2101.6318720856184	2181.9332304671043	0.9981778641565793	1.0257782047268627	1.0050538892898297	0.8983521188417938	0.9438244360896954	1.094671533498344	1.0935212875497378	1.1485447559929114	0.9631971513792403	1.0	11.09139123895979	-8.264126264790992	24.996416279141854	1.0713668913560246	0.9745968741929744	0.33855760069106555	0.05886229894892882	262.3602688189979	2440750.8320053215	0.020796781051039083	0.0191606591072875	5.4434436964233855e-09	8.264126264790992	-0.09677001716305023	
APVPEPGLDLSLS(ph)PRPDS(ph)PQPR	ddPTM_K562_Methotrexat_30min_R1	1	APVPEPGLDLSLSPRPDSPQPR	22	1	Q8TAP8	Q8TAP8	PPP1R35	Protein phosphatase 1 regulatory subunit 35	2	APVPEPGLDLS(0.425)LS(0.593)PRPDS(0.982)PQPR	79.408	0.0056675	65177000.0	1694.5	1503.9	1826.5	1817.3	1583.4	1730.9	1378.8	1964.8	2007.4	2018.1	True	False	1620.0118089370103	1752.393913070793	1443.1426105993514	1657.9801305402702	1791.6448537229542	2065.3719279584134	1688.0309982584706	1895.6968703407583	1914.0764121522038	1652.6025342111689	0.980279150854797	1.0603843796640777	0.8732545065884229	1.00325401675102	1.0841353662683046	1.2497693094391087	1.0214379824028363	1.1470978841537507	1.1582194584167471	1.0	10.690524069864903	-7.784410772189383	3.7659239337296295	1.1225799363952316	0.9751142788451772	0.40350482690437584	0.07850297078732657	0.21013211415846592	6.383501988303613	0.024031631047454982	0.02913616190381582	1.6428171493880528e-08	7.784410772189383	-0.14746565755005436	
APVPEPGLDLSLS(ph)PRPDSPQPR	ddPTM_K562_Methotrexat_30min_R1	1	APVPEPGLDLSLSPRPDSPQPR	22	1	Q8TAP8	Q8TAP8	PPP1R35	Protein phosphatase 1 regulatory subunit 35	1	APVPEPGLDLS(0.074)LS(0.917)PRPDS(0.009)PQPR	81.97399999999999	0.0012281	138250000.0	799.46	525.36	659.29	918.83	675.89	662.54	590.27	736.03	822.54	977.11	True	False	764.3166956463753	612.1668104068564	520.9140387309316	838.277600475605	764.7813819520073	790.5664782191724	722.6530732100574	710.1434077142243	784.3002949345787	800.1459106105125	0.955221648340614	0.7650689734073279	0.6510238093118209	1.0476559204508062	0.9558024003003128	0.9880278930826116	0.9031516172577475	0.8875173868880788	0.9801965923142149	1.0	9.644119296424421	-7.271540243297769	24.999989896230396	0.9592314456496582	0.7879012215361311	0.4927943769923281	0.08142618339435684	591.1265064973903	1463057.505678198	0.023386221295183272	0.03513990938266562	5.3513056433980794e-08	7.271540243297769	-0.17133022411352716	
APVPEPGLDLSLSPRPDS(ph)PQPR	ddPTM_K562_Methotrexat_30min_R1	1	APVPEPGLDLSLSPRPDSPQPR	22	1	Q8TAP8	Q8TAP8	PPP1R35	Protein phosphatase 1 regulatory subunit 35	1	APVPEPGLDLS(0.017)LS(0.054)PRPDS(0.929)PQPR	110.89	1.6481e-05	257170000.0	1711.0	1345.3	1927.2	2208.7	1669.8	1722.8	1561.0	1809.6	2036.4	2504.6	True	False	1635.7864886935527	1567.587958809853	1522.7070567462752	2015.0667002279743	1889.40796813603	2055.7067175959055	1911.09398627899	1745.9553423089558	1941.7282084819906	2050.992669929783	0.7975584275245385	0.7643069533074053	0.742424426508753	0.9824836186747373	0.9212163435965449	1.0022984224835303	0.9317897690704168	0.8512733214052538	0.9467260595077928	1.0	11.002106620421905	-7.258457190666142	24.998222753895202	0.9422475209543606	0.7677176288462624	0.7813377878599089	0.04353194116532974	122.61293862774914	1027799.8077130719	0.012365948385439822	0.020282629958555065	5.514965618955225e-08	7.258457190666142	-0.17452989210809822	
APVPGT(ph)PDSLSSGSSR	ddPTM_K562_Methotrexat_30min_R1	4	APVPGTPDSLSSGSSR	16	0	A0A087WYB4;Q9UJZ1-2;Q9UJZ1	A0A087WYB4	STOML2	Stomatin-like protein 2, mitochondrial	1	APVPGT(0.703)PDS(0.067)LS(0.096)S(0.038)GS(0.055)S(0.04)R;APVPGT(0.977)PDS(0.017)LS(0.005)SGSSR;APVPGT(0.898)PDS(0.071)LS(0.019)S(0.008)GS(0.003)SR;APVPGT(0.807)PDS(0.193)LSSGSSR	197.73	3.557e-11	289723000.0	4900.299999999999	4652.13	5292.36	4890.78	4761.09	5307.1900000000005	4109.150000000001	4717.38	4675.57	5576.41	True	False	4684.888679453545	5420.8154098105115	4181.565960378638	4462.012910825808	5387.256787048014	6332.729356023807	5030.731488608788	4551.467071563564	4458.2037712296915	4566.468112482286	1.0259326385412744	1.1870914843340077	0.9157111924089579	0.9771256036211107	1.1797425612854122	1.3867893523034804	1.1016679334423585	0.996714957698332	0.9762914491931614	1.0	12.156863043686062	-9.255729230188605	5.799293572279077	0.9889094452442942	1.114510980622494	0.1665473545036288	0.12259047468078728	0.32098207050326943	45.3020526211442	0.06999981624083827	0.036699062064003224	5.549716135640824e-10	9.255729230188605	0.12560153537819974	
APVPSTCSSTFPEELS(ph)PPSHQAK	ddPTM_K562_Methotrexat_30min_R1	2	APVPSTCSSTFPEELSPPSHQAK	23	0	A0A087WY61;Q14980-5;Q14980-2;Q14980;F5H0Z7;F5H763;F5H6Y5;F5H4J1;Q14980-4;Q14980-3	A0A087WY61	NUMA1	Nuclear mitotic apparatus protein 1	1	APVPSTCSSTFPEELS(0.994)PPS(0.006)HQAK;APVPSTCSSTFPEELS(0.997)PPS(0.003)HQAK	175.34	2.2932000000000002e-18	71765000.0	7276.0	4546.3	7950.700000000001	6303.2	5975.8	4918.299999999999	4819.1	7278.6	7275.2	8373.0	True	False	6956.155752036401	5297.498801112936	6281.956722744196	5750.608242349332	6761.722443398784	5868.691867397223	5899.905848351753	7022.6075124502495	6936.977539947051	6856.56856397112	1.0145243480227963	0.77261661597748	0.9161954210964491	0.8387006107642203	0.9861671155640857	0.8559225817758398	0.8604750019351813	1.0242160414396797	1.0117272911698794	1.0	12.743271030986978	-9.266344775994444	24.80303310536235	1.0134787612793699	0.8885925925105884	0.40486141617217963	0.06651248977356296	351.1086756622713	1775284.0174233567	0.03287524565165064	0.016587622731236765	5.415707796173192e-10	9.266344775994444	-0.12488616876878145	
APVQPQQS(ph)PAAAPGGTDEKPSGK	ddPTM_K562_Methotrexat_30min_R1	2	APVQPQQSPAAAPGGTDEKPSGK	23	1	Q13200;F8WBS8;C9JPC0	Q13200	PSMD2	26S proteasome non-ATPase regulatory subunit 2	1	APVQPQQS(1)PAAAPGGTDEKPSGK;APVQPQQS(1)PAAAPGGTDEKPSGK	121.48	2.5617e-07	16866600.0	8626.900000000001	6179.3	14598.300000000001	8406.9	6367.700000000001	5565.9	4368.9	8366.4	8112.0	11272.4	True	False	8247.671805558391	7200.324294858934	11534.316327573235	7669.880129554282	7205.164162594207	6641.431402058886	5348.737038215427	8072.148969879341	7734.874890594145	9230.859128210685	0.8934890773441069	0.7800275353410847	1.2495387663671402	0.8308955887013971	0.7805518492395042	0.7194813949399167	0.5794408693627447	0.8744742886618021	0.8379366192422306	1.0	13.17224921230867	-7.505417038896232	24.862377115818543	0.7800226562429844	0.9691356701968734	0.21133408386263453	0.14989127304747063	998.070681314609	1421076.866389307	0.042773827866060495	0.06186375017916542	3.123078935401708e-08	7.505417038896232	0.18911301395388902	
APVSSTESVIQSNT(ph)PT(ph)PPPSQPLNETAEEESR	ddPTM_K562_Methotrexat_30min_R1	1	APVSSTESVIQSNTPTPPPSQPLNETAEEESR	32	0	B5MBZ0;Q9HC35;Q9HC35-2	B5MBZ0	EML4	Echinoderm microtubule-associated protein-like 4	2	APVSSTES(0.002)VIQS(0.151)NT(0.922)PT(0.922)PPPS(0.003)QPLNETAEEESR	102.6	2.3648e-10	12246000.0	563.25	459.51	610.14	433.38	461.6	326.13	427.62	502.91	549.94	575.19	True	False	538.4902044165071	535.4362171654765	482.0799520564406	395.3862482658575	522.3084908920779	389.15000685485967	523.5246703476115	485.22237024789865	524.3734094345838	471.01751729494214	1.1432487851175075	1.1367649768961705	1.0234862491421342	0.8394300291347215	1.1088939831616036	0.8261900939263399	1.1114760091179166	1.0301578018468085	1.1132779359164071	1.0	8.87963690490917	-6.7869782414357305	5.002028291170905	1.0017425721707458	1.1420247611811978	0.23346183688862066	0.09698602591820163	0.2377836871288484	15.111088600127113	0.024874288584255895	0.058491312771668795	1.6331337673909532e-07	6.7869782414357305	0.14028218901045197	
AQAANGGS(ph)ERSQPPRSSGLRR	ddPTM_K562_Methotrexat_30min_R1	1	AQAANGGSERSQPPRSSGLRR	21	3	Q8TF61	Q8TF61	FBXO41	F-box only protein 41	1	AQAANGGS(0.534)ERS(0.464)QPPRS(0.001)S(0.001)GLRR	42.528999999999996	0.033846	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
AQAVASTSTVPSPSQTMPS(ph)CTSPSR	ddPTM_K562_Methotrexat_30min_R1	1	AQAVASTSTVPSPSQTMPSCTSPSR	25	0	A0A087X0D9;E9PFU9;Q8WV99;E7EV05;B4DEN4;Q8WV99-2	A0A087X0D9	ZFAND2B	AN1-type zinc finger protein 2B	1	AQAVASTSTVPS(0.001)PS(0.001)QT(0.001)MPS(0.304)CT(0.304)S(0.304)PS(0.084)R	88.531	0.0011095	13472000.0	1097.9	976.66	1454.9	1384.3	841.36	1200.3	1170.1	951.39	1168.4	1377.9	True	False	1049.6376305883416	1138.036464618472	1149.5363723848882	1262.9405682644024	952.0135872984368	1432.2409874218513	1432.524710663067	917.9290744470143	1114.081339024925	1128.348957876008	0.9302420348436962	1.0085855591701878	1.018777359930179	1.1192819025080223	0.8437226627926321	1.2693245094300316	1.269575959337647	0.8135152410429076	0.9873553134856967	1.0	10.139997595254494	-6.121123704721403	1.3290937330256871	1.0471393600759762	0.8501678569394884	0.05067548137311517	0.14362961629575902	6.5507689019789375	8.104548849267635	0.04387510213594341	1.8990208556955381	7.566173489487551e-07	6.121123704721403	-0.1969715031364878	
AQAVS(ph)EDAGGNEGR	ddPTM_K562_Methotrexat_30min_R1	1	AQAVSEDAGGNEGR	14	0	P55884-2;P55884;C9JZG1	P55884-2	EIF3B	Eukaryotic translation initiation factor 3 subunit B	1	AQAVS(1)EDAGGNEGR	99.915	0.004303100000000001	8387600.0	740.33	606.05	817.42	961.78	744.48	780.47	800.7	668.98	1038.0	756.04	True	False	707.7859796461119	706.1894614113661	645.854712705241	877.4622406597817	842.392169192665	931.2847816821893	980.2773573437457	645.4515942185265	989.7436065627123	619.1138298226117	1.1432243079578863	1.1406455927720163	1.043192191152136	1.4172874169378382	1.360641821608196	1.504222223478711	1.5833556126901809	1.042541069391813	1.5986456106888993	1.0	9.274060876472452	-7.2650620282501075	24.817878946567067	1.3754517552921257	1.1121831816885732	0.2572887158542835	0.192332493894762	350.0859578004098	2398357.76303953	0.05099043505563425	0.07913597372805788	5.4317274712843973e-08	7.2650620282501075	-0.2632685736035525	
AQAWCYSKNNIPY(ph)FET(ph)S(ph)AK	ddPTM_K562_Methotrexat_30min_R1	1	AQAWCYSKNNIPYFETSAK	19	1	C9IZZ0;C9J4V0;C9J8S3;P51149	C9IZZ0	RAB7A	Ras-related protein Rab-7a	3	AQAWCYSKNNIPY(1)FET(1)S(1)AK	57.196999999999996	0.025553	146860000.0	3082.0	2728.5	3120.8	3759.2	2629.2	2960.4	3154.1	2820.6	3020.9	3957.9	True	False	2946.518970282602	3179.3382484298563	2465.7867282553834	3429.6367725345212	2974.9858844312193	3532.455402119177	3861.487214684537	2721.397899268701	2880.4590183673376	3241.0859571648502	0.9091147255039413	0.9809484507504368	0.7607902909222247	1.0581751974065527	0.9178978662551724	1.0898987095082178	1.1914177117543605	0.8396561940150616	0.8887326829452644	1.0	11.662261567684704	-6.254130469693403	21.574544065432125	0.9700121039691649	0.9091145138363731	0.022705214261634077	0.11927846430494576	714.8457709784493	2109692.381987897	0.030832090824422686	0.28141992450923675	5.570183856832633e-07	6.254130469693403	-0.060897590132791835	
AQDTIS(ph)RGSDDSVPVISFK	ddPTM_K562_Methotrexat_30min_R1	1	AQDTISRGSDDSVPVISFK	19	1	F5H7T0;F6RJM5;Q96S38-2;Q96S38;A0A087X1U5	F5H7T0	RPS6KC1	Ribosomal protein S6 kinase delta-1	1	AQDT(0.194)IS(0.523)RGS(0.276)DDS(0.007)VPVISFK	66.31	0.018634	16599000.0	1966.6	1757.2	2949.6	2058.8	1591.6	1871.3	1457.3	2346.7	2190.3	2677.4	True	False	1880.1506187403506	2047.547432706961	2330.5192686689575	1878.3082004932094	1800.9232974519743	2232.9022409085305	1784.1366215274652	2264.165230877777	2088.4734310735143	2192.496915463548	0.8575385467955564	0.9338883983214449	1.0629521310757366	0.8566982180205662	0.8214028876164757	1.0184289086839786	0.8137464682135048	1.0326879891637506	0.9525547864371612	1.0	11.098359097663419	-9.298748160777148	24.997089885071823	0.9944660394301756	0.9148975243790616	0.19767257861778653	0.0786750743588628	1068.8621100333469	716137.7117881103	0.04282828282024061	0.02057475711091644	5.026339730420436e-10	9.298748160777148	-0.07956851505111406	
AQEEAERLEADR	ddPTM_K562_Methotrexat_30min_R1	1	AQEEAERLEADR	12	1	E7EQR4;P15311	E7EQR4	EZR	Ezrin	0		158.34	1.1136e-06	37345000.0	4626.8	3622.0	4984.8	4444.4	3952.3	3718.7	4289.5	4560.4	4458.0	4878.5	False	True	4423.4114119738915	4220.473936526639	3938.5586013225566	4054.7663523761516	4472.096725634227	4437.286145068428	5251.529567036344	4400.008147140674	4250.748553041013	3994.9563763684623	1.1072489897861932	1.0564505688953676	0.9858827557218102	1.0149713714926867	1.11943568447661	1.1107220522648251	1.3145399028887883	1.1013907869353046	1.0640287784331386	1.0	11.963964034138117	-7.8483011123526465	5.381955199533829	1.1342815608977204	1.0385099145666055	0.16436791181328336	0.0809646593913444	0.3208120212655756	15.196170366812654	0.026054763175202965	0.029907565041552963	1.4180739778703528e-08	7.8483011123526465	-0.0957716463311149	
AQEPPAGGGGSIHDLPLFTET(ph)SPTSAPWDPLPGPPPVLPHSPHSHL	ddPTM_K562_Methotrexat_30min_R1	1	AQEPPAGGGGSIHDLPLFTETSPTSAPWDPLPGPPPVLPHSPHSHL	46	0	F8VZ44;Q9NRG9-2;Q9NRG9	F8VZ44	AAAS	Aladin	1	AQEPPAGGGGSIHDLPLFT(0.062)ET(0.235)S(0.235)PT(0.235)S(0.235)APWDPLPGPPPVLPHSPHSHL	74.377	1.2308e-10	8687400.0	1005.0	834.18	765.67	1043.2	855.04	811.67	810.73	1147.2	1160.8	1445.5	True	False	960.8214033530223	972.0140663643815	604.9663304996475	951.7442756724872	967.4927470805068	968.5137401155491	992.5568401639761	1106.85232576085	1106.834661366085	1183.7059428186146	0.8117061582584738	0.8211617693240966	0.5110782235823831	0.8040377607687046	0.8173421388564919	0.818204678274526	0.8385163952125825	0.9350737254264665	0.9350588024678785	1.0	10.209095014676805	-8.974144666501505	0.6998317120939358	0.9925766021298603	0.7300053843830541	0.532430822130247	0.08489512582021781	0.5861184249569558	0.5540079843391945	0.07947479044576568	0.045243649392663884	1.0613419579477105e-09	8.974144666501505	-0.26257121774680625	
AQEPPAGGGGSIHDLPLFTETSPTSAPWDPLPGPPPVLPHS(ph)PHSHL	ddPTM_K562_Methotrexat_30min_R1	1	AQEPPAGGGGSIHDLPLFTETSPTSAPWDPLPGPPPVLPHSPHSHL	46	0	F8VZ44;Q9NRG9-2;Q9NRG9	F8VZ44	AAAS	Aladin	1	AQEPPAGGGGSIHDLPLFTETSPT(0.001)S(0.001)APWDPLPGPPPVLPHS(0.839)PHS(0.158)HL	53.123000000000005	1.1135e-05	12882000.0	818.76	750.65	382.54	607.34	555.87	495.97	706.41	783.38	945.5	1201.8	True	False	782.7682907555422	874.682153631618	302.2500817184103	554.0954451561812	628.976648249955	591.8091831472261	864.840424629943	755.8280813759895	901.5439113728748	984.1423743198967	0.7953811472618315	0.8887760312486062	0.3071202801599553	0.5630236636635989	0.6391114382048805	0.6013450884646674	0.878775721071457	0.7680068464670201	0.9160706163027453	1.0	9.942723232846257	-8.763965676442579	24.92888285481302	0.8713805846703129	0.6264683653834858	0.4042054737841493	0.15277999966443861	75.34960803680617	743514.2443940279	0.06556228195909389	0.04652784801818719	1.7220046646506875e-09	8.763965676442579	-0.24491221928682705	
AQFEGIVTDLIRR	ddPTM_K562_Methotrexat_30min_R1	2	AQFEGIVTDLIRR	13	1	P38646;H0YBG6	P38646	HSPA9	Stress-70 protein, mitochondrial	0	;	115.12	0.0018324	12531500.0	3295.9	3011.5	3304.2	4416.8	3216.6	3111.2	3516.5	3583.8	4118.7	5058.1	False	True	3151.0161823992303	3509.099188252339	2610.6935745646742	4029.586001524387	3639.6392803367808	3712.395367880417	4305.164639814264	3457.7557226828226	3927.222535982507	4142.029076008877	0.7607421687718923	0.8471932774633227	0.6302933964626468	0.9728531421626724	0.8787092542198707	0.8962745793802005	1.039385422171536	0.834797549517591	0.948139779783161	1.0	12.016121965614666	-7.2797350817616095	24.99433655058691	0.9316519219705544	0.7561879696112028	0.5802631898402608	0.07472267104325259	577.6330611910053	789121.2356867901	0.02027265569653253	0.030134416031305015	5.251276887733537e-08	7.2797350817616095	-0.17546395235935153	
AQGEPVAGHES(ph)PKIPYEK	ddPTM_K562_Methotrexat_30min_R1	4	AQGEPVAGHESPKIPYEK	18	1	H7BXG7;D6REX3;O94979-7;O94979-6;O94979-3;O94979-10;O94979-4;O94979-9;O94979-2;O94979;O94979-8;H0YAB3;D6RHZ5	H7BXG7	SEC31A	Protein transport protein Sec31A	1	AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(0.993)PKIPY(0.007)EK;AQGEPVAGHES(0.95)PKIPY(0.05)EK;AQGEPVAGHES(1)PKIPYEK	97.352	0.00098122	324996000.0	21697.4	13381.400000000001	36343.2	24223.5	14254.3	11828.0	10964.8	17209.2	18142.8	28398.6	True	False	20743.60827573319	15592.448905090441	28715.258979214013	22099.863364409975	16128.990298359926	14113.593600954478	13423.93551617673	16603.942681732584	17299.345188001902	23255.338351939616	0.8919933978945125	0.6704890150002892	1.2347813884556538	0.9503135594054573	0.6935607667481941	0.606896936409327	0.5772410322749445	0.7139841369088371	0.7438870562190314	1.0	14.505274309956556	-7.76280001491574	24.83223022411869	0.6952415650972675	0.9391430625001259	0.2745959322971593	0.1671083452862237	40.2725952258367	735000.3884933107	0.05117907288152881	0.06125656701973375	1.726632793442445e-08	7.76280001491574	0.24390149740285838	
AQGVRS(ph)PLLR	ddPTM_K562_Methotrexat_30min_R1	1	AQGVRSPLLR	10	1	A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47	A0A3B3IRT3	TBC1D4	TBC1 domain family member 4	1	AQGVRS(1)PLLR	89.35600000000001	0.011000000000000001	26837000.0	2185.4	1735.2	2421.5	2344.1	2244.1	2255.9	1956.9	2704.5	1917.5	2356.7	True	False	2089.3324327240734	2021.912306643021	1913.2602417554515	2138.5963924500347	2539.238484425718	2691.8207477505234	2395.784639173194	2609.3812020748082	1828.355843529864	1929.8787931100858	1.0826236550104895	1.047688753232331	0.9913888108341494	1.1081506258761418	1.3157502395959395	1.3948133724048721	1.241417154137582	1.352095899178038	0.9473941317233643	1.0	10.9142945259015	-7.5759735118687255	5.687067319521599	1.2364255093940397	1.0422296953385504	0.2207880089931915	0.13733099952108596	0.2413128609916406	16.859953954023187	0.040124613694774235	0.05253202721648292	2.654767474428714e-08	7.5759735118687255	-0.19419581405548936	
AQLEPVAS(ph)PAK	ddPTM_K562_Methotrexat_30min_R1	2	AQLEPVASPAK	11	0	Q15149-4;H0YDN1;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149	Q15149-4	PLEC	Plectin	1	AQLEPVAS(1)PAK;AQLEPVAS(1)PAK	117.7	0.0026276999999999997	25581000.0	4976.6	3611.5	5808.0	4266.3	4009.5	3187.3999999999996	2881.2	4858.0	5483.9	6168.1	True	False	4757.834622812588	4208.23898999612	4588.980171016172	3892.2801028580625	4536.819528231773	3803.319939438812	3527.382442836022	4687.141386459385	5228.954685962672	5050.997319888958	0.9419594431535325	0.8331501134292097	0.9085295200903128	0.7705963508497032	0.8982027193654323	0.7529839551612403	0.6983536556130203	0.9279635465263775	1.03523212443075	1.0	12.302352560922603	-9.512292741612606	7.51799217432561	1.006817009232553	0.8285118789719587	0.5317901521625839	0.07142729510090934	0.10770926818264022	41.70670688724579	0.044735598188123483	0.01908721746092004	3.074024031984713e-10	9.512292741612606	-0.17830513026059436	
AQLERS(ph)AISGFS(ph)S(ph)KS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	AQLERSAISGFSSKSR	16	2	Q96RN1-4;Q96RN1-2;Q96RN1	Q96RN1-4	SLC26A8	Testis anion transporter 1	4	AQLERS(0.988)AIS(0.028)GFS(0.988)S(0.998)KS(0.999)R	72.48899999999999	0.023454	9005300.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
AQLS(ph)PGIYDDTSAR	ddPTM_K562_Methotrexat_30min_R1	3	AQLSPGIYDDTSAR	14	0	E7EVK1;A0A088AWL3;O75376-2;O75376	E7EVK1	NCOR1	Nuclear receptor corepressor 1	1	AQLS(0.988)PGIY(0.002)DDT(0.008)S(0.002)AR;AQLS(1)PGIYDDTSAR;AQLS(1)PGIYDDTSAR	232.01	1.8625999999999998e-47	308354000.0	7489.5	5970.9	7976.400000000001	7215.599999999999	6467.2	5340.169999999999	5738.85	6378.6	6803.9	6798.5	True	False	7160.270547674088	6957.489737053257	6302.262643955478	6583.019550941713	7317.750156623152	6372.082274265224	7025.933198691339	6154.2610225751005	6487.588174077107	5567.225771188063	1.2861469683393252	1.2497229361633213	1.1320292912443815	1.1824595986407924	1.3144338773711206	1.144570480191861	1.2620169340091238	1.1054448437182318	1.1653179591983094	1.0	12.442742875566347	-10.280456399116606	0.5949816710583953	0.9954198830705688	1.2270668951249417	0.5486189105943433	0.06101877243596411	0.953458513352426	0.7038751864636282	0.06989510226928516	0.026995813535948415	5.2425623093670605e-11	10.280456399116606	0.23164701205437288	
AQLYLPS(ph)TSPPHEGLDGFAQELSR	ddPTM_K562_Methotrexat_30min_R1	2	AQLYLPSTSPPHEGLDGFAQELSR	24	0	I3L465;I3L1Z8;I3L1A6;Q8N137-4;Q8N137-5;Q8N137;Q8N137-3;Q8N137-2	I3L465	CNTROB	Centrobin	1	AQLYLPS(0.421)T(0.289)S(0.289)PPHEGLDGFAQELSR;AQLY(0.004)LPS(0.354)T(0.321)S(0.321)PPHEGLDGFAQELSR	96.46600000000001	2.9188999999999997e-06	25000800.0	3748.1	2421.16	2221.71	3396.6000000000004	2895.6	2691.1	3051.9	5346.1	4666.0	5980.5	True	False	3583.3380118482182	2821.21553731663	1755.4034324635577	3098.8253515617025	3276.422153871534	3211.116988462003	3736.3662631164952	5158.074632801676	4449.078678440858	4897.373497770127	0.7316856705905287	0.5760670568828754	0.3584377285626323	0.632752505597676	0.669016189057942	0.6556814565856759	0.7629326749976775	1.0532328471884473	0.9084621951882195	1.0	12.257792511918241	-8.927160644306015	1.4421893900136682	0.9995354064011546	0.5783042538171111	0.7439919087850746	0.09999017039214286	0.2169206093192796	0.8863172971425354	0.06957061940872898	0.03528132174967145	1.1826040329090031e-09	8.927160644306015	-0.4212311525840434	
AQLYLPSTS(ph)PPHEGLDGFAQELSR	ddPTM_K562_Methotrexat_30min_R1	1	AQLYLPSTSPPHEGLDGFAQELSR	24	0	I3L465;I3L1Z8;I3L1A6;Q8N137-4;Q8N137-5;Q8N137;Q8N137-3;Q8N137-2	I3L465	CNTROB	Centrobin	1	AQLY(0.01)LPS(0.097)T(0.247)S(0.646)PPHEGLDGFAQELSR	57.768	0.0081687	5619500.0	1277.9	1026.4	1461.8	1234.0	1044.6	1202.8	1306.3	1313.2	1525.5	1592.4	True	False	1221.7250461142548	1195.9951541830317	1154.9881566789663	1125.8171359085973	1181.9832096747498	1435.2240770399083	1599.2710277234119	1267.0140116711539	1454.5798379686094	1304.00092932851	0.9369050425012942	0.9171735443462488	0.8857264827822805	0.8633560840239065	0.9064281957861849	1.1006311765275896	1.226433963162089	0.9716358195569673	1.1154745408944144	1.0	10.348729182403742	-8.257654324066943	20.902132034224145	1.090037308332857	0.8997234673513523	0.6457227724044244	0.06688751079447994	20.82545354964977	115003.72692258883	0.022453894623265316	0.021558750635739345	5.525170392788901e-09	8.257654324066943	-0.1903138409815046	
AQQCVS(ph)PSSSLCR	ddPTM_K562_Methotrexat_30min_R1	2	AQQCVSPSSSLCR	13	0	B9EGE7;Q8TCN5-2;Q8TCN5	B9EGE7	ZNF507	Zinc finger protein 507	1	AQQCVS(0.489)PS(0.489)S(0.02)S(0.002)LCR;AQQCVS(0.774)PS(0.225)S(0.001)SLCR	188.09	7.8919e-05	29204000.0	2157.85	1978.77	2908.7	2319.3	1840.63	2108.8	1811.0300000000002	2375.9	2395.3	2711.8	True	False	2062.993497736634	2305.728109160911	2298.203619737387	2115.970569945551	2082.7051074321607	2516.2957546240104	2217.1995784566575	2292.338250327061	2283.9430258185575	2220.6667421207308	0.9289973405764075	1.0383044269663566	1.0349160349664213	0.9528537217271983	0.9378737781442986	1.1331262394738955	0.9984386834826183	1.0322747699359356	1.0284942726873993	1.0	11.11677718697325	-8.20867905370565	24.99970122842561	1.0379829307464277	0.9836061428869322	0.2705414767710749	0.048811102181916886	517.6827192777014	245296.5415156542	0.016241847324214072	0.016241832971228404	6.1847328686104335e-09	8.20867905370565	-0.05437678785949551	
AQQCVSPS(ph)SSLCR	ddPTM_K562_Methotrexat_30min_R1	1	AQQCVSPSSSLCR	13	0	B9EGE7;Q8TCN5-2;Q8TCN5	B9EGE7	ZNF507	Zinc finger protein 507	1	AQQCVS(0.011)PS(0.714)S(0.212)S(0.063)LCR	129.76	0.00042809	18647000.0	1322.8	1120.5	1708.8	1416.8	1138.4	990.05	1143.0	1108.1	1445.5	1330.0	True	False	1264.651295875997	1305.6435797565157	1350.146232133683	1292.5913437239074	1288.119553794501	1181.3631505432004	1399.3468458147888	1069.1274949229407	1378.2990205071294	1089.1241120364978	1.1611636193705142	1.1988014637883273	1.239662419748575	1.1868173052444468	1.1827114463437154	1.0846910260156022	1.2848368981549967	0.9816397260031583	1.265511437378719	1.0	10.088952651588308	-15.999999999437904	0.1683640960518486	0.32082927914327963	1.2164182518818236	0.2800060193716566	0.08437111142247837	160.29387900945713	1.5050854146856696	36.26236007233908	0.2894896292383413	1.0000000012942742e-16	15.999999999437904	0.895588972738544	
AQQELEEQTRR	ddPTM_K562_Methotrexat_30min_R1	2	AQQELEEQTRR	11	1	P26038	P26038	MSN	Moesin	0	;	120.55	0.0034251	78411000.0	5091.0	4545.8	6780.5	6581.200000000001	4868.4	4564.5	5548.4	6084.700000000001	6290.7	6248.4	False	True	4867.205735791275	5296.916184611487	5357.365711015006	6004.236413972175	5508.679932970083	5446.525024649702	6792.769938161658	5870.69765215921	5998.246730061703	5116.754211766053	0.9512291453435584	1.035210206585876	1.0470242441381419	1.1734463227030416	1.0765965502706367	1.0644492190235237	1.3275544724312887	1.1473479884297455	1.1722757204691685	1.0	12.321013218423799	-6.411481568080539	0.7206188958154199	1.1558170331514166	0.8574059758595618	0.3345934646707436	0.08382026734843485	2.658682415099188	1.2135057155023217	0.03591255277798762	0.6250917607546436	3.877202034187726e-07	6.411481568080539	-0.2984110572918548	
AQRVPS(ph)PGPPTLTSYSVLR	ddPTM_K562_Methotrexat_30min_R1	2	AQRVPSPGPPTLTSYSVLR	19	1	F8W1U0;F8W130;Q12815	F8W1U0	TROAP	Tastin	1	AQRVPS(1)PGPPTLTSYSVLR;AQRVPS(0.984)PGPPT(0.007)LT(0.007)S(0.002)YSVLR	85.63600000000001	0.0043419	24459000.0	2349.58	1766.71	2204.49	2604.1	2045.8600000000001	1908.41	1920.45	2703.9	2858.9	3248.3	True	False	2246.295276507654	2058.628798564599	1741.7976751383342	2375.8025961260773	2314.9264496890514	2277.1832231989797	2351.1597988145327	2608.8023044148918	2725.9903630078375	2660.00139332944	0.8444714661205636	0.7739201955784987	0.6548108130718612	0.8931584028805188	0.8702726455310352	0.8560834700724352	0.8838941982175657	0.9807522322947118	1.024807870343181	1.0	11.377211286083645	-8.721784514200824	0.6473190584859405	1.0239149414592648	0.771058840890866	0.6765707479746172	0.05952963143034769	0.4667634357685861	0.39605308571334696	0.05502957962886304	0.03933470292966799	1.8976472516253027e-09	8.721784514200824	-0.2528561005683988	
AQS(ph)PGAVEEILDR	ddPTM_K562_Methotrexat_30min_R1	3	AQSPGAVEEILDR	13	0	H7BXT7;E9PHY4;A0A0C4DH16;B8ZZS0;Q9NYM9	H7BXT7	BET1L	BET1-like protein	1	AQS(1)PGAVEEILDR;AQS(1)PGAVEEILDR;AQS(1)PGAVEEILDR	183.75	1.8054999999999999e-07	57909000.0	4477.2	3870.6	5107.1	4033.7	4066.3	4000.6	3404.38	4141.8	4807.5	4997.7	True	False	4280.387648847912	4510.150861049143	4035.1895026509483	3680.0717837232673	4601.089723818147	4773.659330400616	4167.898875726116	3996.1305464054126	4584.000374325854	4092.5681012968435	1.045892833766542	1.1020344071049122	0.9859798060226015	0.8992084414080085	1.1242548956876648	1.166421477235272	1.018406724717764	0.9764359315460451	1.1200791925425229	1.0	11.998790708346435	-6.734226128111026	24.99688210193873	1.0377530567804605	1.073963573740209	0.03621571489404318	0.07734734411198568	1006.4565633703058	924471.5404468756	0.020931536607302324	0.05535303357519016	1.8440550080493922e-07	6.734226128111026	0.03621051695974842	
AQS(ph)PGAVEEILDRENKR	ddPTM_K562_Methotrexat_30min_R1	1	AQSPGAVEEILDRENKR	17	2	H7BXT7;E9PHY4;A0A0C4DH16;B8ZZS0;Q9NYM9	H7BXT7	BET1L	BET1-like protein	1	AQS(1)PGAVEEILDRENKR	81.89	0.0080331	70843000.0	3241.6	2336.7	4926.2	3586.9	2384.4	2315.5	2444.7	3239.1	2860.7	3771.9	True	False	3099.103145382244	2722.799957891165	3892.2579405061774	3272.4420460215138	2697.9903935941734	2762.937604245019	2992.986206442183	3125.179017060643	2727.7066814007226	3088.772359541704	1.0033446251902074	0.8815152562085086	1.260131044776537	1.0594636525778356	0.873483079858461	0.8945099484945433	0.968988924417294	1.0117867726336236	0.8831038237487483	1.0	11.592817833885325	-7.741184088892386	24.47479962525967	0.9385451672301792	1.0539293558740126	0.24363161695803448	0.09703039950999814	290.91087710549874	351510.3906323062	0.02976257244663295	0.03837005988578097	1.814746264455753e-08	7.741184088892386	0.11538418864383337	
AQS(ph)PSYVISTGVSPSR	ddPTM_K562_Methotrexat_30min_R1	1	AQSPSYVISTGVSPSR	16	0	A0A0D9SF60;Q99569-2;Q99569	A0A0D9SF60	PKP4	Plakophilin-4	1	AQS(0.736)PS(0.23)Y(0.031)VIS(0.003)TGVSPSR	91.065	0.0084706	23157000.0	1152.3	1074.5	1300.5	1142.2	1242.5	1105.7	813.24	1308.8	983.05	1487.5	True	False	1101.6462717250615	1252.0428616228257	1027.542822384044	1042.0650993799031	1405.9105284519208	1319.3608762745482	995.6297715576727	1262.7687621650975	937.3482200688575	1218.0993358302928	0.904397727935831	1.0278659751254162	0.8435624190564395	0.8554844984539791	1.1541838067694292	1.0831307738750489	0.8173633646052535	1.0366714150651406	0.7695170603060324	1.0	10.250416074282423	-13.7831317137964	2.1172333551754954	3.283624281259393	0.9498468837158357	0.016969614605486405	0.12061536430514198	6413292.660782887	894762.0611614856	73366799.29967879	0.03175791135511109	1.6476626089610873e-14	13.7831317137964	-2.3337773975435576	
AQS(ph)PVSGPNVAHLTDGATLNDR	ddPTM_K562_Methotrexat_30min_R1	1	AQSPVSGPNVAHLTDGATLNDR	22	0	Q5THJ4-2;Q5THJ4	Q5THJ4-2	VPS13D	Vacuolar protein sorting-associated protein 13D	1	AQS(0.623)PVS(0.377)GPNVAHLTDGATLNDR	154.71	8.388e-21	78883000.0	1108.1	690.31	1032.8	971.83	801.01	855.46	609.75	782.68	994.91	1010.6	True	False	1059.3892508014758	804.3719942362513	816.029394047091	886.6311727634134	906.3568550464973	1020.7655378654476	746.5019590862364	755.1527007727532	948.6568512575222	827.5705470857775	1.280119567488269	0.9719678848755335	0.9860541761915915	1.0713662731057951	1.095201923555834	1.2334483645654024	0.9020402692132803	0.9124934465490128	1.1463153861602982	1.0	9.692738490930346														
AQS(ph)QEDGDYINANYIR	ddPTM_K562_Methotrexat_30min_R1	1	AQSQEDGDYINANYIR	16	0	H7C5I3;J3KR55;P35236;P35236-2;P35236-3	H7C5I3	PTPN7	Tyrosine-protein phosphatase non-receptor type 7	1	AQS(1)QEDGDYINANYIR	94.639	0.004968600000000001	7657000.0	549.28	705.75	665.56	584.23	665.9	569.63	483.7	848.2	577.44	738.03	True	False	525.1343088893016	822.3631918011248	525.8680514155513	533.0114629755913	753.477521847995	679.7029356536774	592.1820379007995	818.3683252356637	550.5949404369677	604.3656153430798	0.8689016971807686	1.360704796771561	0.8701157677824412	0.881935453381174	1.246724669172764	1.1246552060507793	0.9798407170544208	1.3540947804767174	0.9110295596886528	1.0	9.239277772208062	-7.761195370448893	24.999999970910704	1.1153812583596552	1.0125567190441904	0.07234912802249116	0.1808204027981282	19.632404950296372	2011231.2860251204	0.053412763938926244	0.06470278944057767	1.7330242091546753e-08	7.761195370448893	-0.10282453931546476	
AQS(ph)SPAAPASLSAPEPASQAR	ddPTM_K562_Methotrexat_30min_R1	1	AQSSPAAPASLSAPEPASQAR	21	0	J3KPH8;Q8WUI4-8;Q8WUI4-5;Q8WUI4-6;Q8WUI4-7;Q8WUI4;Q8WUI4-4;Q8WUI4-3;Q8WUI4-10;H0YI15	J3KPH8	HDAC7	Histone deacetylase;Histone deacetylase 7	1	AQS(0.5)S(0.5)PAAPASLSAPEPASQAR	281.07	2.811899999999999e-162	200710000.0	1968.2	1501.5	1861.9	1906.6	1267.2	1717.4	1478.5	1812.8	1602.6	1913.4	True	False	1881.680284656137	1749.5973538638166	1471.1126343689757	1739.4513381874651	1433.8590113917694	2049.2632440209018	1810.0912611873725	1749.0427964951787	1528.095475797111	1566.864718774912	1.2009207062415512	1.1166231091295349	0.9388893736270977	1.1101477475014523	0.9151134710039702	1.3078750318809678	1.155231360753743	1.1162691810832952	0.9752568026369797	1.0	10.61366490928581	-9.761338452771032	24.99999973377866	0.9876283517870605	1.1042363413412448	0.16379410707735387	0.10824206187274106	5.140280262556351	1275983.4212808015	0.08710146014803899	0.02806329945166897	1.7324533423907953e-10	9.761338452771032	0.11660798955418428	
AQS(ph)TDSLGTSGSLQSK	ddPTM_K562_Methotrexat_30min_R1	3	AQSTDSLGTSGSLQSK	16	0	I3L456;Q15276-2;Q15276	I3L456	RABEP1	Rab GTPase-binding effector protein 1	1	AQS(0.449)T(0.449)DS(0.1)LGT(0.001)SGSLQSK;AQS(0.701)T(0.213)DS(0.065)LGT(0.017)S(0.004)GSLQSK;AQS(0.5)T(0.5)DSLGTSGSLQSK	289.1	6.899299999999998e-171	54845000.0	4918.4	3624.29	8324.5	5630.4	4493.5	3853.92	3924.63	5072.43	4737.72	6118.8	True	False	4702.19302512587	4223.142320103292	6577.301211023438	5136.79157375994	5084.474011749464	4598.635496329934	4804.828181531145	4894.029761819306	4517.464431295076	5010.626027615729	0.9384442181895134	0.8428372616171566	1.3126705475070546	1.0251795974093572	1.014738274963393	0.9177766352916508	0.9589277178240118	0.9767301999483078	0.90157685015752	1.0	12.290775149662108	-8.099643082717753	4.687417902168437	0.9503255671976873	1.0350185912291403	0.09939168139957	0.11409569046221882	0.5754174019178714	20.650249579669985	0.039863031723153246	0.040298304042485696	7.949813077360902e-09	8.099643082717753	0.08469302403145296	
AQSLVIS(ph)PPAPSPR	ddPTM_K562_Methotrexat_30min_R1	1	AQSLVISPPAPSPR	14	0	P46013;P46013-2	P46013	MKI67	Antigen KI-67	1	AQS(0.002)LVIS(0.997)PPAPS(0.002)PR	89.13600000000001	0.017122	637780000.0	2420.1	2042.5	1847.5	2315.2	1926.8	2192.5	2162.3	2272.4	2182.0	2662.1	True	False	2313.715301745919	2379.98840843613	1459.7349975813313	2112.2300105798895	2180.2079728138124	2616.1695950365815	2647.2508177649324	2192.478403991419	2080.5592962618844	2179.96789372358	1.0613529256129945	1.0917538810036773	0.669613071726471	0.9689271189090827	1.0001101296449932	1.2000954704740767	1.2143531220742851	1.0057388506976908	0.9543990543402469	1.0	11.090091172000589	-7.985895680536115	4.3509036397817455	1.085841763316139	0.9409680924174676	0.16826820115690244	0.13141403784881603	0.35670956315934715	16.425972419228295	0.04562317421472427	0.04995848275967024	1.033009509435663e-08	7.985895680536115	-0.14487367089867143	
AQSLVISPPAPS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	6	AQSLVISPPAPSPR	14	0	P46013;P46013-2	P46013	MKI67	Antigen KI-67	1	AQSLVISPPAPS(1)PR;AQSLVIS(0.001)PPAPS(0.999)PR;AQSLVIS(0.007)PPAPS(0.993)PR;AQSLVISPPAPS(1)PR;AQSLVIS(0.001)PPAPS(0.999)PR;AQSLVISPPAPS(1)PR	216.71	1.4841000000000002e-26	1698089000.0	10148.449999999999	8671.4	11252.019999999999	10932.119999999999	9338.94	9186.19	9556.81	11017.9	10690.71	11940.92	True	False	9702.336289410923	10104.201461401743	8890.37476995134	9973.71801281126	10567.17430227829	10961.291207402095	11700.167917367658	10630.394211994835	10193.70122554532	9778.30367811944	0.9922310258293054	1.0333286625175644	0.9091939729633284	1.0199844820865085	1.08067561103917	1.1209808539624089	1.1965437260399987	1.0871409358846245	1.0424815551960611	1.0	13.255368495501465	-7.708752804768027	3.2189300663610005	1.1009752361731604	0.9815587121235528	0.4301073574683606	0.05634213718012926	0.21826142913136037	4.602366131730313	0.018013432417379363	0.02311700211658255	1.9554521590900608e-08	7.708752804768027	-0.11941652404960756	
AQSNGSGNGS(ph)DSEMDTSSLER	ddPTM_K562_Methotrexat_30min_R1	2	AQSNGSGNGSDSEMDTSSLER	21	0	Q9NRY4	Q9NRY4	ARHGAP35	Rho GTPase-activating protein 35	1	AQSNGS(0.008)GNGS(0.86)DS(0.065)EMDT(0.065)S(0.003)SLER;AQSNGSGNGS(0.938)DS(0.061)EMDTSSLER	176.88	1.7138e-17	40679700.0	5015.200000000001	4967.6	6221.3	5099.8	4338.7	3946.0	4822.4	4744.4	4943.0	5633.0	True	False	4794.737813030922	5788.411465237363	4915.534149094851	4652.708451950299	4909.315098426033	4708.508653142234	5903.945957355417	4577.53676284848	4713.201008901238	4612.809115113976	1.0394398929972741	1.254856058593775	1.0656270455651393	1.0086496830544303	1.0642788322500811	1.0207464769601449	1.27990250843266	0.992353390009154	1.021763721689312	1.0	12.171429877439303	-9.006632616667977	0.01334372375451661	3.4671776084206727e-07	2.1391231400820825	0.09117036383923172	0.09458381158654112	1781.248462947281	18.39160976808782	1453.1420206891858	1491.239878746604	9.848438638158635e-10	9.006632616667977	2.1391227933643218	
AQSNGSGNGSDSEMDT(ph)SSLER	ddPTM_K562_Methotrexat_30min_R1	1	AQSNGSGNGSDSEMDTSSLER	21	0	Q9NRY4	Q9NRY4	ARHGAP35	Rho GTPase-activating protein 35	1	AQSNGS(0.005)GNGS(0.245)DS(0.005)EMDT(0.733)S(0.011)S(0.001)LER	115.09	0.00036714	37800000.0	1835.5	1243.0	2008.9	1853.1	1316.5	1553.2	1475.0	1350.5	1576.6	1999.3	True	False	1754.8136177656431	1448.384622612537	1587.2593432428348	1690.6416001233572	1489.6428255186743	1853.3339179068728	1805.806297092576	1303.0021495293129	1503.3042101221297	1637.2073963868947	1.0718334290684797	0.8846677738012513	0.969491920660578	1.0326374067539548	0.9098681259357388	1.1320092506281987	1.1029795620748826	0.7958687166970234	0.918212447268274	1.0	10.677021374211837	-9.260504991663906	24.996328419329757	0.8927804420315605	1.0091975702942904	0.2440641164157311	0.0876559814610488	118.26823507256937	3163969.9393514236	0.044770073396147594	0.023926066328551144	5.489022466360756e-10	9.260504991663906	0.11641712826272987	
AQSPSYVISTGVS(ph)PSRGSLR	ddPTM_K562_Methotrexat_30min_R1	1	AQSPSYVISTGVSPSRGSLR	20	1	A0A0D9SF60;Q99569-2;Q99569	A0A0D9SF60	PKP4	Plakophilin-4	1	AQSPS(0.001)YVIS(0.015)T(0.039)GVS(0.445)PS(0.445)RGS(0.055)LR	58.938	0.024401	3803100.0	931.45	775.28	654.96	743.41	794.37	646.19	707.09	605.77	822.05	925.73	True	False	890.5045732867386	903.3818424932001	517.4928465579807	678.2363995184853	898.8435786610484	771.057072117076	865.6729319397896	584.4647257462951	783.8330749276274	758.071326492892	1.1746976071585902	1.1916844905248776	0.682644005217935	0.8946867871341981	1.1856978984014854	1.0171299786317742	1.1419412681715597	0.7709890947204627	1.0339832777397326	1.0	9.566189786899871														
AQSPVS(ph)GPNVAHLTDGATLNDR	ddPTM_K562_Methotrexat_30min_R1	2	AQSPVSGPNVAHLTDGATLNDR	22	0	Q5THJ4-2;Q5THJ4	Q5THJ4-2	VPS13D	Vacuolar protein sorting-associated protein 13D	1	AQS(0.03)PVS(0.97)GPNVAHLTDGATLNDR;AQS(0.162)PVS(0.838)GPNVAHLTDGATLNDR	129.2	4.6633999999999994e-09	114041000.0	1494.54	1165.85	1746.33	1599.44	1337.01	1118.95	1315.48	1406.58	1480.96	1520.18	True	False	1428.8418111116669	1358.486896438316	1379.7991980114787	1459.2195784907994	1512.8502500165016	1335.1712512502547	1610.5098764063334	1357.1097841428661	1412.110492846931	1244.860671154618	1.1477925556009452	1.0912762591963876	1.1083964896502867	1.1721950996631307	1.2152767655623027	1.0725467373082587	1.2937270119655824	1.090170021102953	1.1343522416345497	1.0	10.28176856488102	-10.356119021824377	1.562208745537098	1.0003877619062187	1.1512172538673906	0.3331193556042945	0.06319343290177507	1.7157163228875003	5.992485985853312	0.05920471132206694	0.017049451159986278	4.4043414251830016e-11	10.356119021824377	0.1508294919611719	
AQSS(ph)PAAPASLSAPEPASQAR	ddPTM_K562_Methotrexat_30min_R1	3	AQSSPAAPASLSAPEPASQAR	21	0	J3KPH8;Q8WUI4-8;Q8WUI4-5;Q8WUI4-6;Q8WUI4-7;Q8WUI4;Q8WUI4-4;Q8WUI4-3;Q8WUI4-10;H0YI15	J3KPH8	HDAC7	Histone deacetylase;Histone deacetylase 7	1	AQS(0.119)S(0.881)PAAPASLSAPEPASQAR;AQS(0.421)S(0.579)PAAPASLSAPEPASQAR;AQS(0.086)S(0.914)PAAPASLSAPEPASQAR	291.33	1.0234999999999995e-184	424558000.0	3169.34	2698.2200000000003	3160.33	3210.39	2868.53	2394.95	2531.9300000000003	2801.03	2889.06	3205.82	True	False	3030.019608460564	3144.0549931018522	2497.019921464797	2928.9400931520263	3245.7919743904936	2857.740192306892	3099.779754439055	2702.5161872610825	2754.7482311908175	2625.214932969057	1.1541986792805885	1.1976371738621794	0.9511678034837039	1.1156953498811097	1.2363909459861173	1.0885737988221995	1.1807717972003444	1.0294456858831744	1.0493419782871878	1.0	11.358219829358793	-9.282843326984679	23.07846760762391	1.0295453010795843	1.129337369590847	0.30156761380160213	0.07365183670983587	439.4492706675931	473823.21909841313	0.04134760574868158	0.01990561720734226	5.213827675533224e-10	9.282843326984679	0.09979206851126277	
AQT(ph)PPGPSLSGSK	ddPTM_K562_Methotrexat_30min_R1	3	AQTPPGPSLSGSK	13	0	Q9UQ35;Q9UQ35-2;I3L4D8	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	AQT(0.953)PPGPS(0.044)LS(0.002)GSK;AQT(0.976)PPGPS(0.022)LS(0.001)GS(0.001)K;AQT(0.99)PPGPS(0.009)LS(0.001)GSK	113.25	0.0037239000000000005	69996000.0	10599.0	8360.0	17780.0	10709.5	7949.5	7524.499999999999	7000.7	10510.9	9937.1	12338.099999999999	True	False	10133.080650884256	9741.347904296714	14048.22097807637	9770.614762571418	8994.998588272465	8978.503132429987	8570.78518241084	10141.225689365163	9475.126389955998	10103.55053136655	1.0029227467538295	0.9641509560480371	1.3904241815254508	0.9670476464920396	0.8902809522600419	0.8886483127447282	0.8482943848108416	1.0037289028130902	0.9378016530466586	1.0	13.302574745185835	-7.501694275578822	24.96431199744248	0.9229210109578992	1.1161763777681422	0.35781798900737305	0.11473953795640647	819.9845184991871	966290.8105262977	0.03270779053010908	0.047944692672796725	3.149964972094783e-08	7.501694275578822	0.1932553668102429	
AQTLPTSVVTITSES(ph)SPGKR	ddPTM_K562_Methotrexat_30min_R1	2	AQTLPTSVVTITSESSPGKR	20	1	A0A087WUZ3;Q01082	A0A087WUZ3	SPTBN1	Spectrin beta chain, non-erythrocytic 1	1	AQTLPTSVVTIT(0.003)S(0.095)ES(0.451)S(0.451)PGKR;AQTLPTSVVTIT(0.002)S(0.047)ES(0.596)S(0.355)PGKR	142.32	3.968e-10	447280000.0	4756.8	3815.9	7028.1	5411.6	3916.0	3675.7	3254.5	4577.2	4907.6	6031.4	True	False	4547.696767631497	4446.412615790169	5552.997854669209	4937.17343005103	4431.0226393704	4385.97700363784	3984.404470432397	4416.217281618342	4679.44674717453	4939.055014539044	0.9207625252694068	0.9002557377274217	1.1243037055313025	0.9996190395769078	0.89713976182222	0.8880194674339293	0.8067139278067459	0.8941421524195153	0.947437664370956	1.0	12.270019323182174	-7.766115975333231	24.137192720041803	0.8944616990033568	0.9899559008239219	0.21956470638865244	0.07257395290212058	104.88315539086048	541331.1658811509	0.023191525571928797	0.02718690453230836	1.7134996681886857e-08	7.766115975333231	0.09549420182056512	
AQTPPIS(ph)SLPTSPSDEVGRR	ddPTM_K562_Methotrexat_30min_R1	1	AQTPPISSLPTSPSDEVGRR	20	1	Q15751	Q15751	HERC1	Probable E3 ubiquitin-protein ligase HERC1	1	AQT(0.086)PPIS(0.456)S(0.456)LPT(0.001)S(0.001)PS(0.001)DEVGRR	68.243	0.010332	12683000.0	1362.3	956.01	966.8	1212.0	1099.7	1043.2	867.75	1105.8	999.84	1246.6	True	False	1302.4149231719614	1113.9744031084574	763.8818921037249	1105.7458417513947	1244.3298254636431	1244.7836358231068	1062.3650266454795	1066.908387226593	953.3576566335861	1020.8286601990201	1.2758408672793762	1.0912452270798096	0.748295891256422	1.0831845586465207	1.218940919253824	1.2193854702124298	1.040688871762634	1.045139531073304	0.9339056531266668	1.0	9.995525023723276	-9.445554644464288	2.4141653523792237	0.9705344368144192	1.0928623414164016	0.1212278537433128	0.1376773660649925	0.7943645146847159	8.644875992645003	0.11615020871652337	0.04171435815555009	3.5846384225330545e-10	9.445554644464288	0.1223279046019824	
AQVPGPLT(ph)PEMEAR	ddPTM_K562_Methotrexat_30min_R1	1	AQVPGPLTPEMEAR	14	0	B8ZZS4;Q9H8Y5	B8ZZS4	ANKZF1	Ankyrin repeat and zinc finger domain-containing protein 1	1	AQVPGPLT(1)PEMEAR	115.12	0.0035786999999999998	9089700.0	1015.2	753.55	1151.0	1115.7	1027.3	964.03	938.67	953.84	954.58	1008.9	True	False	970.5730235661574	878.0613293400464	909.4208293456633	1017.8883132359981	1162.4079564415758	1150.3151537984563	1149.1906419606023	920.2929065583418	910.2017841547531	826.1784335591141	1.1747740973883842	1.0627986566502647	1.1007559534421	1.2320441588519957	1.4069696196667958	1.3923325846730057	1.3909714842228162	1.1139154317957558	1.1017012151160528	1.0	9.690309590560132	-7.313828286378265	5.001404625823243	1.2604051398097467	1.1074364245972996	0.12941076338377644	0.13315300239646652	0.34736751559289675	19.420050958944064	0.04002027123253529	0.06147879058454369	4.854804140027215e-08	7.313828286378265	-0.15296871521244704	
AREQAEAEVASLNRR	ddPTM_K562_Methotrexat_30min_R1	2	AREQAEAEVASLNRR	15	2	A0A494C0G0;D6R904;A0A087WWU8;P06753-4;P06753-3;P06753-6;P06753-5;P06753-2	A0A494C0G0	TPM3	Tropomyosin alpha-3 chain	0	;	116.9	0.0025656	43354000.0	3389.6	3158.9	4344.9	4457.700000000001	3512.7	3690.2000000000003	3581.0	4079.1	4465.8	4871.7	False	True	3240.5972425924415	3680.8545328807295	3432.964866571652	4066.900362025735	3974.6816203565863	4403.278923422572	4384.130406704078	3935.63574094411	4258.185932743503	3989.387922261808	0.8123043699282985	0.9226614720370052	0.8605242040802368	1.0194296571991377	0.9963136445510459	1.1037479957391825	1.0989481324289136	0.986526208439709	1.0673782584495566	1.0	11.961951700469347	-7.334226458979567	1.6730138358119626	1.0504224420668828	0.8585285145142953	0.7408483246323101	0.046819018403319194	0.18952111156754622	1.0375017236540045	0.014913637860712982	0.02972822015655567	4.632053224731705e-08	7.334226458979567	-0.1918939275525875	
ARFEELNADLFR	ddPTM_K562_Methotrexat_30min_R1	2	ARFEELNADLFR	12	1	E9PKE3;P11142-2;P11142;E9PN89;E9PNE6;A8K7Q2;P54652	E9PKE3	HSPA8;HSPA2	Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2	0	;	199.4	1.5327e-07	450540000.0	7199.9	5023.200000000001	6454.6	6109.4	5852.5	4828.8	5642.3	7870.900000000001	7538.4	8655.9	False	True	6883.401016916841	5853.1984201989535	5099.867667327995	5573.798387455418	6622.206332205127	5761.897259070761	6907.729403447753	7594.075985731413	7187.94142939532	7088.232632614073	0.9711025827856201	0.825762742784071	0.7194836755022264	0.7863452959782239	0.9342535262930445	0.8128820762116872	0.9745348045807927	1.071363819351791	1.0140668064874834	1.0	12.79121023793583	-8.887907613033718	3.942765622890166	1.0311518511903834	0.8370293724154946	0.6064347359193318	0.06916771966395627	0.15687227926421052	4.510954853040711	0.032391167882178135	0.021162424400469986	1.29447118353032e-09	8.887907613033718	-0.19412247877488886	
ARFS(ph)IPSMTEHHAGRY(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	ARFSIPSMTEHHAGRYR	17	2	A0A0G2JNW3;A0A0G2JLU2;A0A0G2JPI7;A0A0G2JPG2;A0A0G2JPK5;A0A0G2JM46;A0A0G2JMM1;A0A0G2JMZ3;A6NI73-4;A6NI73-3;A6NI73-2;A6NI73;O75022;O75022-3;O75022-2	A0A0G2JNW3	LILRA5;LILRB3	Leukocyte immunoglobulin-like receptor subfamily A member 5;Leukocyte immunoglobulin-like receptor subfamily B member 3	2	ARFS(1)IPS(0.09)MT(0.09)EHHAGRY(0.821)R	54.233999999999995	0.029466000000000003	35111000.0	1257.4	1467.9	1736.9	2088.3	1291.7	1305.7	1359.6	1176.5	1288.7	1405.9	True	False	1202.1262015682482	1710.4455249661653	1372.3484261429046	1905.2219812949156	1461.5811908260325	1558.0080457191634	1664.5249095098752	1135.1218281534525	1228.7886182826264	1151.2778865504592	1.04416684764974	1.4856930242021098	1.192021876017121	1.6548758588627783	1.2695294575711222	1.3532858260548877	1.44580637651023	0.9859668472870484	1.0673258234503316	1.0	10.169020386734006	-9.267114736364377	24.90323930481217	1.0199847227040924	1.35736707260725	0.4798505240624078	0.15803919269525343	369.94591809267774	1623294.265486252	0.0787755220161829	0.03948250692836497	5.406114797997238e-10	9.267114736364377	0.33738234990315763	
ARGDSEALDEES(ph)	ddPTM_K562_Methotrexat_30min_R1	3	ARGDSEALDEES	12	1	A0A087WZ99;Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3	A0A087WZ99	HDGFRP2	Hepatoma-derived growth factor-related protein 2	1	ARGDSEALDEES(1);ARGDSEALDEES(1);ARGDS(0.001)EALDEES(0.999)	105.36	0.0094506	45519600.0	9199.3	8219.7	11231.2	10752.7	8116.8	8549.4	8087.5	9885.2	9673.400000000001	10863.599999999999	True	False	8794.909786930804	9577.865713988955	8873.92460342921	9810.02748564374	9184.301470695005	10201.450552248913	9901.327747617774	9537.531913015298	9223.685745398587	8896.096769563677	0.9886256877309311	1.076636862444867	0.9975076523211477	1.1027339000185907	1.032396758780476	1.1467333164755196	1.1129968573963027	1.0721029862946378	1.0368238997754267	1.0	13.118956766092472	-7.264408328559246	24.997123433248795	1.0781497113975858	1.0264947470422028	0.19385698059943546	0.04610429819492205	403.9593189325705	3401160.102079118	0.01260201718887746	0.019636960476612328	5.4399094591462513e-08	7.264408328559246	-0.05165496435538297	
ARGPGGS(ph)PGGLQK	ddPTM_K562_Methotrexat_30min_R1	1	ARGPGGSPGGLQK	13	1	Q96A00-2;Q96A00;K7EJB8;K7EMN0	Q96A00-2	PPP1R14A	Protein phosphatase 1 regulatory subunit 14A	1	ARGPGGS(1)PGGLQK	123.68	0.0022231	11094000.0	1819.5	1457.1	2552.2	1770.6	1672.5	1512.7	1485.9	2102.1	2155.6	2709.3	True	False	1739.5169586077834	1697.861008534777	2016.5280978766311	1615.3742470338436	1892.4630654614377	1805.0078660943373	1819.1508995592267	2028.1679515183769	2055.3866264995977	2218.619516346227	0.7840537531521122	0.7652781362578698	0.9089111868976913	0.7280988178153915	0.8529912639451014	0.8135725178632461	0.8199472176982954	0.9141576266571843	0.9264259199723203	1.0	11.115446557448651	-9.612136850738557	1.0194141206888747	0.9969797064352306	0.80530833519853	0.6577905757589977	0.0469942329395835	0.2953230324708407	0.5946320110976293	0.041926597957975924	0.014903044092136617	2.4426607234397177e-10	9.612136850738557	-0.19167137123670064	
ARGQLR	ddPTM_K562_Methotrexat_30min_R1	1	ARGQLR	6	1	P78563-6;P78563-2;P78563-3;P78563-4;P78563;P78563-5	P78563-6	ADARB1	Double-stranded RNA-specific editase 1	0		24.504	0.034075	404610.0	0.0	0.0	0.0	106.79	0.0	0.0	0.0	0.0	0.0	0.0	False	True	0.0	0.0	0.0	97.4278865021711	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
ARHDS(ph)PDLAPNVTYSLPR	ddPTM_K562_Methotrexat_30min_R1	4	ARHDSPDLAPNVTYSLPR	18	1	Q9BRD0;H7C462	Q9BRD0	BUD13	BUD13 homolog	1	ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR	87.15700000000001	0.0039111	939831000.0	2944.6200000000003	2420.5800000000004	3336.12	2887.73	2356.1	2184.84	2301.58	3142.93	3359.23	3352.6	True	False	2815.178030588434	2820.5397021749463	2635.914002777285	2634.567194390062	2665.96844755378	2607.0294084468524	2817.7679032286987	3032.3913704703186	3203.060130514122	2745.4116526417747	1.0254119916332134	1.0273649488814836	0.9601161269352356	0.9596255599246647	0.9710632811616611	0.9495950838331425	1.0263553374654395	1.1045306693997592	1.1666957585147477	1.0	11.422806770758918	-9.100690572805263	3.5332541295130615	1.101170921021151	0.9818875500730189	0.5243444514944751	0.04562481909286414	0.17996207908890127	4.135275403547255	0.02333288961209351	0.0128394221552093	7.93066174963841e-10	9.100690572805263	-0.11928337094813224	
ARPFPDGLAEDIDKGEVSAR	ddPTM_K562_Methotrexat_30min_R1	1	ARPFPDGLAEDIDKGEVSAR	20	2	P13639	P13639	EEF2	Elongation factor 2	0		84.40299999999999	0.0077215	19843000.0	1515.8	1409.7	1742.9	1883.5	1449.0	1213.5	1166.4	1842.1	1905.5	2013.4	False	True	1449.167246967672	1642.6289641970184	1377.0891081377558	1718.3764793224009	1639.5688979692827	1447.9917006051953	1427.9948914771394	1777.312298887781	1816.9137209106423	1648.753749755101	0.8789470514823244	0.9962852029546606	0.8352303115867381	1.0422274882332436	0.9944292155288912	0.8782340606171626	0.8661056217092746	1.0779731655814433	1.101992169043145	1.0	10.687160225259111	-9.276484191951834	24.767288288499845	1.0674870230715694	0.9315685823312005	0.4465776210276079	0.06739452450252387	682.5280530723878	1123594.2435495185	0.0367705948354601	0.017778749103414874	5.290732547954604e-10	9.276484191951834	-0.13591844074036885	
ARPSAWEPAAGNS(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	1	ARPSAWEPAAGNSPAR	16	1	Q8IY33-2;Q8IY33;Q8IY33-4;Q8IY33-5	Q8IY33-2	MICALL2	MICAL-like protein 2	1	ARPSAWEPAAGNS(1)PAR	91.51799999999999	0.018771	17357000.0	1248.5	1115.1	1017.0	1254.9	974.98	934.18	1303.1	1110.8	1461.3	1203.2	True	False	1193.6174349116895	1299.3513215408207	803.5455981273151	1144.8848653579407	1103.206959380325	1114.697063758848	1595.353346265313	1071.7325343925659	1393.3644819557708	985.2888207536198	1.2114391331454721	1.3187517143927232	0.8155432003305443	1.1619789459117686	1.1196787542321986	1.1313404153984488	1.6191732948366062	1.0877343899759542	1.4141685692627928	1.0	9.944402877990031	-8.572148958356188	24.999999481148915	1.3001055533463777	1.1214710392765121	0.12328359994252402	0.1980478018729404	208.71308695672948	105900.39568929301	0.07276197316040807	0.056361195311155333	2.6782495563492272e-09	8.572148958356188	-0.17863451406986552	
ARPSQFPEQSSSAQQNGS(ph)VSDISPVQAAK	ddPTM_K562_Methotrexat_30min_R1	1	ARPSQFPEQSSSAQQNGSVSDISPVQAAK	29	1	O00139-1;O00139-5;O00139;O00139-4	O00139-1	KIF2A	Kinesin-like protein KIF2A	1	ARPSQFPEQSSS(0.001)AQQNGS(0.71)VS(0.036)DIS(0.252)PVQAAK	92.38	6.931399999999999e-07	0.0	653.29	568.5	933.41	682.52	559.37	436.93	414.02	726.79	480.54	755.59	True	False	624.572153827359	662.4349621522349	737.4999968023769	622.684531280661	632.9369595977067	521.360538727176	506.87452415069055	701.228383751506	458.19980028674917	618.7453291832004	1.0094171614222132	1.0706100408494539	1.1919281843726293	1.0063664352871329	1.0229361414869031	0.8426092515565636	0.8191973340951286	1.1333069530838975	0.7405305198693204	1.0	9.273201919204366	-7.903946890585259	2.3308506240555165	0.9117528672368131	1.0835159266300511	0.3218103915807671	0.11121337621672375	0.3524371614914005	3.898076486475747	0.03735665715241426	0.043417972498001306	1.247536064786438e-08	7.903946890585259	0.171763059393238	
ARPSQFPEQSSSAQQNGSVSDIS(ph)PVQAAK	ddPTM_K562_Methotrexat_30min_R1	1	ARPSQFPEQSSSAQQNGSVSDISPVQAAK	29	1	O00139-1;O00139-5;O00139;O00139-4	O00139-1	KIF2A	Kinesin-like protein KIF2A	1	ARPSQFPEQSSSAQQNGS(0.002)VS(0.032)DIS(0.965)PVQAAK	105.08	1.2289999999999999e-11	17026000.0	2305.3	2161.0	3197.9	2870.9	1734.6	1755.7	1679.3	2265.1	2264.4	2612.3	True	False	2203.9617722882804	2518.0685192805277	2526.7044918892257	2619.2126543597988	1962.7303039458352	2094.9641769695445	2055.925772683094	2185.435149129099	2159.1285382472097	2139.187156295444	1.0302800135099028	1.1771146399556807	1.1811516745757151	1.2243962136046307	0.9175121953073104	0.9793272041692308	0.9610780275268019	1.0216194233859115	1.0093219435677145	1.0	11.062846993274196	-7.76214086287402	24.999999448049238	0.9814300466476376	1.1569352877074883	0.7104904136865642	0.053692020052442224	10.329399060029443	368132.9872826388	0.016687833433773266	0.020067126315962903	1.729255386414891e-08	7.76214086287402	0.17550524105985077	
ARQPLSEASNQQPLS(ph)GGEEK	ddPTM_K562_Methotrexat_30min_R1	2	ARQPLSEASNQQPLSGGEEK	20	1	Q9NQW6-2;Q9NQW6;C9JJT6	Q9NQW6-2	ANLN	Actin-binding protein anillin	1	ARQPLSEASNQQPLS(1)GGEEK;ARQPLSEAS(0.018)NQQPLS(0.982)GGEEK	103.71	0.00016608	36445000.0	4800.7	3794.0	7425.700000000001	5005.3	3967.5	3478.7	3153.6	4994.0	4836.6	5411.0	True	False	4589.666976195872	4420.894013026525	5867.147048194692	4566.493120229579	4489.295792058748	4150.909541734895	3860.875076956712	4818.358189373854	4611.747521677468	4431.015466337962	1.0358047745631158	0.997715771161638	1.3241089074878878	1.0305748546627358	1.013152814781067	0.93678516206251	0.8713296322902602	1.0874162426149268	1.0407879540733975	1.0	12.113421647182207	-7.5090600917083785	24.671742923216417	0.9903487988207931	1.1187739850334326	0.2587928478724906	0.09659989775045369	776.8330603040621	1386954.3141213993	0.028763952959197543	0.04072213409141594	3.096990750504587e-08	7.5090600917083785	0.12842518621263954	
ARS(ph)PDLGPQEQMNPK	ddPTM_K562_Methotrexat_30min_R1	1	ARSPDLGPQEQMNPK	15	1	H3BUW4;H3BMU4;A0A0C4DGM2;C9K0J8;Q8IWY8-4;Q8IWY8-3;Q8IWY8-2;Q8IWY8	H3BUW4	ZSCAN29	Zinc finger and SCAN domain-containing protein 29	1	ARS(1)PDLGPQEQMNPK	96.666	0.006287600000000001	6885300.0	2203.1	1599.3	3324.9	2372.2	1625.9	1704.2	1591.6	2245.5	2034.3	2617.8	True	False	2106.254361917456	1863.5571415480547	2627.048927446914	2164.2329090780995	1839.7343486599414	2033.5125308375566	1948.5568152220646	2166.524492238483	1939.725837023628	2143.6910529993547	0.9825363402858267	0.86932169583889	1.2254792610023106	1.0095824704077594	0.8582087171963838	0.9486033577424129	0.9089727796809772	1.0106514598767304	0.9048532596661502	1.0	11.065881285410049	-7.547218166220277	24.258619950794902	0.9377221128662989	1.028032950964589	0.16687916159841187	0.09153640891356894	288.60700307735704	287646.5055298857	0.02735445034977367	0.03531625035002441	2.83649376837296e-08	7.547218166220277	0.09031083809828999	
ARS(ph)PSVAAMASPQLCR	ddPTM_K562_Methotrexat_30min_R1	2	ARSPSVAAMASPQLCR	16	1	P25325-2	P25325-2			1	ARS(0.869)PS(0.131)VAAMASPQLCR;ARS(0.5)PS(0.5)VAAMAS(0.001)PQLCR	94.45	0.007313200000000001	115257000.0	6937.7	6082.8	7813.0	7272.700000000001	5808.6	6199.5	6365.0	7566.799999999999	7335.5	7910.1	True	False	6632.727014967425	7087.879310078477	6173.15807096235	6635.113682595188	6572.532712729038	7397.4656348594235	7792.513275250339	7300.671355096931	6994.4742061086445	6477.50423956383	1.0239633614526276	1.0942299762285832	0.9530149024461352	1.024331816267861	1.0146705381657315	1.1420240514358257	1.2030116827488262	1.127080907258276	1.079810054524893	1.0	12.661222339319979	-8.257899982263279	24.75372410011625	1.1241170439708856	1.0223449115822698	0.35347797057658525	0.0582765277467577	273.49845183214893	1912786.8976723596	0.019518965752270252	0.01878549443090155	5.522045969975654e-09	8.257899982263279	-0.10177213238861582	
ARS(ph)VDALDDLTPPSTAESGSR	ddPTM_K562_Methotrexat_30min_R1	2	ARSVDALDDLTPPSTAESGSR	21	1	S4R3V8;Q86X29-6;Q86X29-5;Q86X29-4;Q86X29;Q86X29-2;Q86X29-3	S4R3V8	LSR	Lipolysis-stimulated lipoprotein receptor	1	ARS(1)VDALDDLTPPSTAESGSR;ARS(1)VDALDDLTPPSTAESGSR	140.07	7.0996e-13	83413000.0	3059.7	2568.0	3540.7	3479.5	2979.1	2685.3999999999996	2697.5	3306.8	3249.5	3946.9	True	False	2925.1992515813345	2992.318351463391	2797.5554565284015	3174.4576372722586	3370.9038674536146	3204.3155441328336	3302.483041632017	3190.4979696879177	3098.4314542635198	3232.078163757032	0.9050521377803018	0.9258186837861188	0.8655593444177313	0.9821722979564967	1.0429524586544061	0.9914102882982487	1.0217831606501573	0.9871351520716997	0.9586499141660118	1.0	11.65824637294396	-7.386245834597601	5.498798249592161	1.0012213776163692	0.9021125792981853	0.768115569090297	0.025009110228950818	0.10588577917457312	4.299844774292603	0.00716749406878593	0.010720822301034895	4.109170535738726e-08	7.386245834597601	-0.09910879831818387	
ARS(ph)VDALDDLTPPSTAESGSRS(ph)PTSNGGR	ddPTM_K562_Methotrexat_30min_R1	1	ARSVDALDDLTPPSTAESGSRSPTSNGGR	29	2	S4R3V8;Q86X29-6;Q86X29-5;Q86X29-4;Q86X29;Q86X29-2;Q86X29-3	S4R3V8	LSR	Lipolysis-stimulated lipoprotein receptor	2	ARS(1)VDALDDLT(0.002)PPS(0.148)T(0.039)AES(0.033)GS(0.286)RS(0.307)PT(0.098)S(0.088)NGGR	61.11600000000001	0.0013582000000000002	22893000.0	265.43	292.88	359.07	175.73	253.53	189.66	209.08	396.35	292.09	426.62	True	False	253.762015016908	341.2734418911987	283.706113981883	160.32402373842612	286.87363885586734	226.3091107843274	255.9715122685531	382.4101458466814	278.5107996540486	349.35498396767724	0.7263729634965974	0.9768672483652723	0.8120854918392457	0.4589143739058822	0.8211522721038645	0.6477912758366883	0.7326974682354493	1.0946176908758871	0.7972143305097853	1.0	8.448549911965834	-9.237992148546605	24.67647784631847	0.9594370041623148	0.740171284440155	0.3438815869449141	0.14208296896305964	763.4163431961281	803441.182563606	0.06841971994031415	0.03946947760741913	5.781064986902547e-10	9.237992148546605	-0.2192657197221598	
ARSVDALDDLTPPS(ph)TAESGSRS(ph)PTSNGGR	ddPTM_K562_Methotrexat_30min_R1	1	ARSVDALDDLTPPSTAESGSRSPTSNGGR	29	2	S4R3V8;Q86X29-6;Q86X29-5;Q86X29-4;Q86X29;Q86X29-2;Q86X29-3	S4R3V8	LSR	Lipolysis-stimulated lipoprotein receptor	2	ARS(0.001)VDALDDLT(0.123)PPS(0.341)T(0.361)AES(0.237)GS(0.222)RS(0.68)PT(0.024)S(0.011)NGGR	64.422	0.00042717	0.0	241.69	317.61	269.41	251.48	184.88	418.33	284.27	391.22	226.67	438.05	True	False	231.06559699143472	370.08965405307174	212.86452270548676	229.4331388478883	209.19496056353412	499.16635196882663	348.0247837793266	377.460570854393	216.13216117492274	358.7149002087127	0.6441483106974167	1.0317097333780694	0.5934086445297779	0.6395974594710065	0.5831788990137217	1.3915406125544114	0.9701988503316527	1.0522578533391653	0.6025179356897904	1.0	8.486693862616175	-8.212954603841503	24.999476232006806	1.0045013529406428	0.707824701122846	0.3366202490241941	0.21380055701000863	487.73494138611386	251483.55079095726	0.07103596803900517	0.07103585267842238	6.124144031490673e-09	8.212954603841503	-0.2966766518177968	
ART(ph)DEVPAGGS(ph)RSEAEDEDDEDYVPYVPLR	ddPTM_K562_Methotrexat_30min_R1	1	ARTDEVPAGGSRSEAEDEDDEDYVPYVPLR	30	2	D6RGI7;A0A499FJW5;Q9UJV9;D6RD33	D6RGI7	DDX41	Probable ATP-dependent RNA helicase DDX41	2	ART(0.876)DEVPAGGS(0.758)RS(0.302)EAEDEDDEDY(0.063)VPY(0.001)VPLR	51.621	0.020801	11670000.0	747.73	486.62	831.48	663.98	625.78	628.59	597.16	689.93	675.29	874.88	True	False	714.8606845066217	567.0256838742666	656.9637108465096	605.7699042954545	708.0810386274794	750.0561212059501	731.088331099527	665.6647708439532	643.8959152945407	716.4307542394669	0.9978084836202881	0.7914591612921441	0.9169954066864633	0.8455386661039065	0.9883453975662293	1.0469345666242071	1.0204591675794543	0.929140418532975	0.8987552690672441	1.0	9.484683459031091	-7.772911588778273	24.994414561201005	0.982371949317734	0.8831328378516343	0.339291926641478	0.06317065126686736	242.20275055973573	527683.4536680928	0.01975617080701135	0.022592077701740192	1.686896399293394e-08	7.772911588778273	-0.09923911146609965	
ARTDEVPAGGS(ph)RS(ph)EAEDEDDEDYVPYVPLR	ddPTM_K562_Methotrexat_30min_R1	3	ARTDEVPAGGSRSEAEDEDDEDYVPYVPLR	30	2	D6RGI7;A0A499FJW5;Q9UJV9;D6RD33	D6RGI7	DDX41	Probable ATP-dependent RNA helicase DDX41	2	ART(0.428)DEVPAGGS(0.836)RS(0.595)EAEDEDDEDY(0.115)VPY(0.026)VPLR;ART(0.021)DEVPAGGS(0.843)RS(0.949)EAEDEDDEDY(0.177)VPY(0.011)VPLR;ART(0.293)DEVPAGGS(0.788)RS(0.788)EAEDEDDEDY(0.128)VPY(0.003)VPLR	71.097	5.6143999999999996e-05	58273000.0	2422.65	2219.74	2663.2	2749.53	2578.55	2150.37	2272.33	2581.0299999999997	2794.43	2947.17	True	False	2316.1532067992016	2586.5143058712415	2104.230714781383	2508.4829738207195	2917.6745216416093	2565.898568793072	2781.9578461507595	2490.25371195827	2664.5175592360674	2413.4089543388	0.9597019198239266	1.071726489296907	0.8718914840348215	1.0393940775395718	1.2089432735368975	1.0631843244718753	1.1527088441224957	1.0318407526753057	1.104047266604289	1.0	11.236856686915296	-7.521382383169328	24.999828081426624	1.0990111255289452	0.9744143033585261	0.38209589044758074	0.07126678802219698	55.20842816332506	922382.4975205616	0.019898272818554406	0.02607041744092536	3.010354330957464e-08	7.521382383169328	-0.12459682217041912	
ARTDEVPAGGS(ph)RSEAEDEDDEDYVPYVPLR	ddPTM_K562_Methotrexat_30min_R1	1	ARTDEVPAGGSRSEAEDEDDEDYVPYVPLR	30	2	D6RGI7;A0A499FJW5;Q9UJV9;D6RD33	D6RGI7	DDX41	Probable ATP-dependent RNA helicase DDX41	1	ART(0.12)DEVPAGGS(0.438)RS(0.438)EAEDEDDEDY(0.003)VPYVPLR	51.119	0.0045125	139500000.0	439.26	293.65	504.2	473.44	445.38	312.96	416.46	218.48	402.51	594.7	True	False	419.95065635507314	342.1706713034364	398.37531030068084	431.9342502630197	503.9552765890678	373.4350907469322	509.8617562624912	210.7959345643571	383.7973979552573	486.9940672391767	0.8623321814489855	0.7026177407935169	0.818029083103855	0.8869394502312992	1.0348283695652518	0.7668165094165872	1.0469568123343966	0.4328511346336982	0.7880946068420243	1.0	8.927760386688597	-12.012988348055043	4.535072719947616	1.0000038433786649	0.8149246117067215	0.10147194232617018	0.16470187340926676	133491466.95408233	18.847486256522178	8618.439066571435	0.040160406727452476	9.705360059839275e-13	12.012988348055043	-0.1850792316719434	
ARTDEVPAGGSRS(ph)EAEDEDDEDYVPYVPLR	ddPTM_K562_Methotrexat_30min_R1	1	ARTDEVPAGGSRSEAEDEDDEDYVPYVPLR	30	2	D6RGI7;A0A499FJW5;Q9UJV9;D6RD33	D6RGI7	DDX41	Probable ATP-dependent RNA helicase DDX41	1	ARTDEVPAGGS(0.158)RS(0.842)EAEDEDDEDYVPYVPLR	119.52	2.6419e-14	130310000.0	347.2	542.33	694.95	680.2	370.32	462.45	531.24	525.82	711.21	687.49	True	False	331.9375037255415	631.9408144661763	549.0894920536656	620.5679220786291	419.0235709427086	551.8119175483087	650.384093062685	507.3266125623871	678.1460023347458	562.9788990856929	0.5896091385745102	1.1224946716341966	0.975328725366822	1.102293395163591	0.7442971159722411	0.980164475870197	1.1552548312537871	0.9011467630248877	1.20456735312121	1.0	9.136937039691382	-8.529585703741818	24.31138447198579	1.0585338138102636	0.9263323771809316	0.16227642615783255	0.16650513038267079	263.6629018827085	955708.3574329284	0.06114695280067607	0.047489946966195545	2.9540258830205905e-09	8.529585703741818	-0.13220143662933193	
ARVGGS(ph)DEEASGIPSR	ddPTM_K562_Methotrexat_30min_R1	4	ARVGGSDEEASGIPSR	16	1	H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55-2;Q9NQ55;Q9NQ55-3	H7C446	PPAN;PPAN-P2RY11	Suppressor of SWI4 1 homolog	1	ARVGGS(0.99)DEEAS(0.001)GIPS(0.008)R;ARVGGS(0.978)DEEAS(0.017)GIPS(0.005)R;ARVGGS(1)DEEASGIPSR;ARVGGS(0.997)DEEAS(0.003)GIPSR	160.09	5.1346e-09	60260000.0	3341.26	3542.38	4949.33	4043.9500000000003	4827.92	4687.85	3760.4300000000003	6823.0	6963.9	6657.200000000001	True	False	3194.382211111758	4127.698084835236	3910.533269596328	3689.4231821374174	5462.876103439516	5593.710666404667	4603.802151712431	6583.031222686785	6640.149809000063	5451.516570413061	0.5859621207882928	0.757165099201465	0.7173294291757104	0.676770057374671	1.0020837381451073	1.0260834015920146	0.8444993411005262	1.2075596098184453	1.2180371687830969	1.0	12.412441917166428	-7.975565346251513	0.7307602494803541	1.1254844629122813	0.6365665699178772	0.7180770395860604	0.11102545819804518	0.39634399050397995	0.4706223671385498	0.07419922302487095	0.10135753293967195	1.0578757304265526e-08	7.975565346251513	-0.48891789299440414	
ARVS(ph)SGYVPPPVATPFSSK	ddPTM_K562_Methotrexat_30min_R1	1	ARVSSGYVPPPVATPFSSK	19	1	Q15942-2;Q15942;H7C3R3	Q15942-2	ZYX	Zyxin	1	ARVS(0.351)S(0.351)GY(0.298)VPPPVATPFSSK	78.794	0.005716399999999999	8530100.0	1533.9	1187.5	1633.8	1634.2	1237.1	1242.6	1102.4	1280.2	1177.9	1805.3	True	False	1466.4715926399995	1383.7141909512375	1290.88770719804	1490.9322232591821	1399.8003338011042	1482.7148637593878	1349.641262315157	1235.1746403757331	1123.1396860984762	1478.3426762853298	0.9919700054420676	0.9359901551568085	0.8731992439274547	1.0085159869736604	0.9468713555090076	1.0029574925652853	0.9129420965553371	0.8355130783881506	0.7597289208484589	1.0	10.529765006159211	-9.063189024559033	4.2896751310293455	0.849945679724031	0.956794529352077	0.2800250380482474	0.0667480098481681	0.2545809010830841	9.245272598350567	0.031453468395843814	0.01802619179436229	8.64591527617e-10	9.063189024559033	0.10684884962804597	
AS(ph)ASPSTSSTSSRPK	ddPTM_K562_Methotrexat_30min_R1	1	ASASPSTSSTSSRPK	15	1	F5H858;F6TH74;J3KP75;O75167-5;O75167-2;O75167;O75167-4	F5H858	PHACTR2	Phosphatase and actin regulator;Phosphatase and actin regulator 2	1	AS(0.634)AS(0.364)PS(0.001)T(0.001)SSTSSRPK	94.639	0.0047012	2864900.0	1588.5	1451.6	2145.4	1571.5	965.14	1101.6	973.01	1322.9	1297.5	1778.6	True	False	1518.6714420161945	1691.4522270187924	1695.1098586257058	1433.7290349111524	1092.0728269055026	1314.4686093009338	1191.2322611078287	1276.3728571731424	1237.1795082033898	1456.4783050136202	1.0427010390669655	1.1613301902241344	1.1638414748717139	0.9843806323622135	0.7498037033207233	0.902497898373187	0.817885345087024	0.8763418258819904	0.8494321569670208	1.0	10.508268496622758	-7.4972919121481105	4.530006095275828	0.8588753342753352	1.1224427382141307	0.7416288705190004	0.06777031090425889	0.09124436120132279	4.560753663637984	0.018787445297545377	0.026943135623415965	3.182057974339791e-08	7.4972919121481105	0.2635674039387954	
AS(ph)DLEDEESAAR	ddPTM_K562_Methotrexat_30min_R1	2	ASDLEDEESAAR	12	0	E7ERS3;Q86VM9;H3BPD0	E7ERS3	ZC3H18	Zinc finger CCCH domain-containing protein 18	1	AS(1)DLEDEESAAR;AS(1)DLEDEESAAR	158.86	3.9991e-07	28769000.0	3253.2	2754.0	4401.299999999999	3554.7	3114.7	3176.2	3022.5	3331.8	3121.7	3737.6	True	False	3110.1932232716936	3209.051690003964	3477.527277323258	3243.064970027789	3524.337644240802	3789.9556979499166	3700.372564720209	3214.6187055177825	2976.572848368802	3060.6844219154964	1.0161757288669482	1.048475193007848	1.1361926935109778	1.059588158389146	1.1514867782530593	1.2382706530645893	1.2090016658445208	1.050294072299668	0.9725187043314796	1.0	11.57963858519241	-9.510512155457857	6.477330791060763	0.9931500030772703	1.1241184944808298	0.4136152496878218	0.06569701252346476	0.16001021694128115	31.952487517689985	0.04548578781859307	0.019281717504312814	3.0866532522108536e-10	9.510512155457857	0.13096849140355948	
AS(ph)DPGLPAEEPKEK	ddPTM_K562_Methotrexat_30min_R1	1	ASDPGLPAEEPKEK	14	1	P27708;F8VPD4	P27708	CAD	CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase	1	AS(1)DPGLPAEEPKEK	79.837	0.02632	17070000.0	3433.4	2625.6	7028.3	4188.9	2871.5	2138.4	2025.3	3014.7	3065.1	5505.0	True	False	3282.471847037079	3059.4357724307947	5553.1558774023715	3821.665640686812	3249.1525814484444	2551.615535701812	2479.525080340063	2908.6712922517736	2922.6041700148035	4507.9911554593355	0.7281451391185385	0.6786694265639165	1.231847110142908	0.8477535800083904	0.7207539831824219	0.5660205283703177	0.5500288254419646	0.6452255987080344	0.6483163052517145	1.0	12.138268969651486	-7.8249514535337825	3.6872040990423502	0.6517071077012961	0.8854701664928796	0.18924570356581905	0.18108145601163006	0.32690029431649426	8.918598907685096	0.05824902494462358	0.06900408659255974	1.4964029182096007e-08	7.8249514535337825	0.23376305879158343	
AS(ph)EMAS(ph)EKEY(ph)K	ddPTM_K562_Methotrexat_30min_R1	2	ASEMASEKEYK	11	1	O76041	O76041	NEBL	Nebulette	3	AS(1)EMAS(1)EKEY(1)K;AS(1)EMAS(1)EKEY(1)K	65.495	0.028437	0.0	0.0	0.0	121.54	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	96.03041494237353	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
AS(ph)FETLPNISDLCLR	ddPTM_K562_Methotrexat_30min_R1	1	ASFETLPNISDLCLR	15	0	Q9H019-3;Q9H019;E9PRW1;E9PSD6;C9JF50;E9PLU1;E9PRK5;Q9H019-2	Q9H019-3	MTFR1L	Mitochondrial fission regulator 1-like	1	AS(1)FETLPNISDLCLR	118.52	0.00084147	4141700.0	890.21	629.01	612.64	640.23	616.49	615.86	739.77	914.94	1000.4	1068.9	True	False	851.0774343073565	732.9432111580949	484.05523622096194	584.1020299212009	697.5692407930179	734.8662288707995	905.6822538306266	882.7610416070715	953.8916223558155	875.3118521472271	0.9723133900444497	0.8373509502471744	0.5530088905268749	0.6673073470767481	0.7969379588335416	0.8395479017770633	1.0346966645189344	1.0085103262815085	1.0897734561868715	1.0	9.773653295166849	-8.622083669492527	2.2287973101934275	1.0403445981232338	0.7515541777999224	0.5914504601348118	0.10500611798656477	0.2322314025228258	2.347403204123203	0.05197619078650595	0.037527376794619906	2.3873513007518534e-09	8.622083669492527	-0.28879042032331137	
AS(ph)GQAFELILS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	ASGQAFELILSPR	13	0	A2A2D0;P16949;P16949-2	A2A2D0	STMN1	Stathmin	2	AS(1)GQAFELILS(1)PR;AS(1)GQAFELILS(1)PR	171.04	0.00057989	22866000.0	6936.2	5243.5	7346.4	7350.5	5290.8	4740.1	5174.799999999999	6741.2	5845.8	7463.200000000001	True	False	6631.292953171373	6109.899250739212	5804.491034496072	6706.093077387476	5986.632936767339	5656.0572394220735	6335.380627928586	6504.108175051467	5574.0300339540445	6111.542160113372	1.0850441311605643	0.9997311792455786	0.9497588141302122	1.0972832881943295	0.9795617505248927	0.925471360786154	1.0366255295228237	1.0642335444399214	0.9120496738667092	1.0	12.577320754070671	-6.262322303447758	7.834437450599014	0.9982957505956669	1.085805267102387	0.185609957579294	0.05573814560914011	0.1643807709636547	117.0996317082962	0.01366652644705297	0.0775233788454524	5.46610155927542e-07	6.262322303447758	0.08750951650672012	
AS(ph)GQAFELILSPR	ddPTM_K562_Methotrexat_30min_R1	3	ASGQAFELILSPR	13	0	A2A2D0;P16949;P16949-2	A2A2D0	STMN1	Stathmin	1	AS(1)GQAFELILSPR;AS(1)GQAFELILSPR;AS(1)GQAFELILSPR	139.49	1.2943e-05	16675000.0	3547.2000000000003	3159.5899999999997	3723.5199999999995	3528.15	2930.49	3018.35	3185.92	3221.04	3829.4300000000003	4264.8099999999995	True	False	3391.2693352973533	3681.6585436527344	2942.004036911525	3218.842567306254	3315.9008004209813	3601.6034194657523	3900.4436596835135	3107.75419749715	3651.4006351439753	3492.4115821461437	0.9710394252023878	1.0541880465847886	0.8423990035858304	0.9216675903154069	0.9494587686550124	1.0312654550448228	1.1168339034331765	0.889859091461203	1.0455241454960844	1.0	11.770007875854736	-8.250523417212296	21.36480536153035	1.016071292130038	0.9463618016388136	0.18852445925425787	0.07148593370767739	188.26954983242896	368480.6384516181	0.024380804638687678	0.024065887188659655	5.616639925470418e-09	8.250523417212296	-0.06970949049122455	
AS(ph)GVAVSDGVIK	ddPTM_K562_Methotrexat_30min_R1	1	ASGVAVSDGVIK	12	0	E9PP50;P23528;E9PS23	E9PP50	CFL1	Cofilin-1	1	AS(1)GVAVSDGVIK	158.86	1.7587999999999998e-40	0.0	1271.7	855.03	1675.3	1203.2	870.53	929.99	862.27	1024.4	1282.3	1840.5	True	False	1215.7975906905845	996.3091744749781	1323.6774243290963	1097.7173240885134	985.0199535881297	1109.6974055589828	1055.6559971484846	988.3712713645529	1222.6861528857087	1507.1676151903562	0.8066770931360733	0.6610473609129026	0.8782549538538984	0.7283312838100432	0.6535570056444725	0.736280022457109	0.7004237528120949	0.655780592286493	0.8112476280425404	1.0	10.557624155583817	-10.050946337080994	6.916898757360131	0.99999311032455	0.727510997511733	0.6045175337262735	0.06696481548301046	0.3418216588314115	45.318556768284104	0.06399641223739436	0.016574463322399712	8.89310997392973e-11	10.050946337080994	-0.272482112812817	
AS(ph)IDS(ph)LANVVMNNRLALDY(ph)LLAEQGGVCAVIS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	ASIDSLANVVMNNRLALDYLLAEQGGVCAVISK	33	1	B6SEH8	B6SEH8	ERVV-1	Endogenous retrovirus group V member 1 Env polyprotein	4	AS(1)IDS(1)LANVVMNNRLALDY(1)LLAEQGGVCAVIS(1)K	43.31	0.0098951	34888000.0	67.523	0.0	0.0	0.0	0.0	0.0	0.0	0.0	136.18	0.0	True	False	64.5547697697573	0.0	0.0	0.0	0.0	0.0	0.0	0.0	129.8490215238055	0.0											0.0														
AS(ph)LEDAPVDDLTR	ddPTM_K562_Methotrexat_30min_R1	1	ASLEDAPVDDLTR	13	0	Q7Z2W4-2;Q7Z2W4;C9J6P4;Q7Z2W4-3	Q7Z2W4-2	ZC3HAV1	Zinc finger CCCH-type antiviral protein 1	1	AS(1)LEDAPVDDLTR	177.36	0.00095859	6539100.0	1344.2	960.26	1556.1	1358.4	1014.0	981.47	1007.5	1407.0	1379.8	1502.8	True	False	1285.1105774996342	1118.926643370809	1229.4958753647152	1239.311181052058	1147.3587733201196	1171.1251869740267	1233.4575215734033	1357.5150125048092	1315.6533991668875	1230.628357570262	1.0442718710276928	0.9092319679517253	0.9990797528769914	1.007055601659415	0.9323357179786195	0.9516481395620383	1.0022989588901778	1.1031072087312133	1.069090754388675	1.0	10.265179426954164	-9.059719962857464	5.317145369249334	1.0637701918019289	0.9719941881705955	0.42274418261648017	0.0433423334969357	0.1827002482776946	10.658284183456495	0.01991762486586462	0.011523066637254145	8.715253765254472e-10	9.059719962857464	-0.09177600363133342	
AS(ph)LTRSPPR	ddPTM_K562_Methotrexat_30min_R1	1	ASLTRSPPR	9	1	A8MUU9	A8MUU9		Putative uncharacterized protein ENSP00000383309	1	AS(0.5)LT(0.5)RSPPR	77.66199999999999	0.026343000000000002	141800000.0	4973.9	6031.5	9618.1	6141.0	5757.2	5903.2	5096.5	3861.5	3628.7	2921.8	True	False	4755.253311579697	7028.102857029381	7599.392249113403	5602.628064517583	6514.372711793483	7043.909853327227	6239.519859750722	3725.6888562809636	3460.0025290309345	2392.633707179125	1.987455621523472	2.937391894104592	3.176161995173494	2.3416154540107135	2.7226786499943696	2.9439984198968254	2.6078040449856457	1.5571496987198632	1.4461062379290057	1.0	11.224383833529831	-9.333844400804463	2.6425641523406815	1.2534266528568156	2.7165611576176336	0.7792385840829826	0.3297220177203285	0.1338708566744562	1.7915307338792645	0.22495928546715058	0.09245617783868113	4.6361299342726384e-10	9.333844400804463	1.463134504760818	
AS(ph)PAPGSGHPEGPGAHLDMNSLDR	ddPTM_K562_Methotrexat_30min_R1	7	ASPAPGSGHPEGPGAHLDMNSLDR	24	0	O94826	O94826	TOMM70A	Mitochondrial import receptor subunit TOM70	1	AS(0.888)PAPGS(0.112)GHPEGPGAHLDMNSLDR;AS(0.99)PAPGS(0.01)GHPEGPGAHLDMNSLDR;AS(0.766)PAPGS(0.234)GHPEGPGAHLDMNSLDR;AS(0.938)PAPGS(0.062)GHPEGPGAHLDMNSLDR;AS(0.999)PAPGS(0.001)GHPEGPGAHLDMNSLDR;AS(0.969)PAPGS(0.031)GHPEGPGAHLDMNSLDR;AS(0.999)PAPGS(0.001)GHPEGPGAHLDMNSLDR	152.62	2.712e-27	2637590000.0	5580.5	4861.88	7251.54	5396.3	5361.849999999999	5558.300000000001	4629.7300000000005	6043.0599999999995	5958.89	6802.5199999999995	True	False	5335.18790190203	5665.223032170108	5729.540852157474	4923.214757296247	6067.027257126704	6632.362809619995	5668.064805314175	5830.522154560981	5681.862504538031	5570.51771023347	0.957754409810219	1.0170011706026276	1.0285472823525659	0.8837984211506809	1.0891316701105012	1.1906187458009214	1.0175113158515776	1.0466750951800876	1.0199882309143389	1.0	12.443595698991835	-7.802961691912676	24.99974196867622	1.0673290668055326	0.9790604892902319	0.3227507089670625	0.06227017524525741	182.43655091720737	109840.25472378911	0.019978001003820398	0.022653133709568462	1.5741217078890685e-08	7.802961691912676	-0.0882685775153007	
AS(ph)PGHSPHYFAASSPTSPNALPPAR	ddPTM_K562_Methotrexat_30min_R1	1	ASPGHSPHYFAASSPTSPNALPPAR	25	0	Q8TEM1	Q8TEM1	NUP210	Nuclear pore membrane glycoprotein 210	1	AS(0.935)PGHS(0.063)PHY(0.002)FAASSPTSPNALPPAR	94.96	1.5128e-05	25576000.0	1071.3	643.72	1153.0	1133.6	719.28	831.86	973.77	771.26	940.05	1107.8	True	False	1024.2069347384	750.0837886308473	911.0010566772803	1034.2190480275415	813.8779274888512	992.6051718709837	1192.1627104541274	744.1343486456701	896.3472806833114	907.1666851985203	1.1290173586062269	0.8268423001740879	1.0042267551722546	1.1400540439833475	0.8971647005651953	1.0941816846523265	1.3141605946356372	0.8202840346620831	0.988073410662296	1.0	9.825223849475714	-5.933638935451001	20.619440276717793	1.0141439236631489	3.811643012522917	0.05968651749548959	0.14127815481265613	1536.5624888183597	484915.89616026485	0.03441962623850614	3066.1530895603905	1.1650942650912972e-06	5.933638935451001	2.797499088859768	
AS(ph)PGHSPHYFAASSPTSPNALPPARK	ddPTM_K562_Methotrexat_30min_R1	1	ASPGHSPHYFAASSPTSPNALPPARK	26	1	Q8TEM1	Q8TEM1	NUP210	Nuclear pore membrane glycoprotein 210	1	AS(0.959)PGHS(0.039)PHY(0.002)FAASSPTSPNALPPARK	69.133	0.0017737000000000002	13965000.0	1023.5	909.45	1434.6	954.76	804.04	980.26	538.32	837.48	904.24	1280.1	True	False	978.5081655042965	1059.72115449314	1133.4970649689744	871.0576731605287	909.7853531561224	1169.681371598887	659.0519632887293	808.0253537118176	862.202079767116	1048.2614855773836	0.933458091294209	1.010932070932134	1.0813113717944554	0.830954571111376	0.86789924620288	1.1158297692818744	0.6287095084159491	0.7708242311952884	0.8225066852400993	1.0	10.03378292223466	-8.759415013663341	24.999999946978406	0.7864121419293487	0.9687387408966392	0.32289383392067983	0.11769548171158245	60.41751166149411	746143.0574772416	0.04619691302317422	0.03396597289667133	1.7401431903357992e-09	8.759415013663341	0.18232659896729053	
AS(ph)PGLLPVANGNSLNK	ddPTM_K562_Methotrexat_30min_R1	1	ASPGLLPVANGNSLNK	16	0	Q14814-6;Q14814-3;Q14814-5;Q14814-4;Q14814-2;Q14814	Q14814-6	MEF2D	Myocyte-specific enhancer factor 2D	1	AS(1)PGLLPVANGNSLNK	108.34	0.0011279000000000003	5523900.0	893.2	678.73	1385.2	876.48	852.4	518.5	709.39	986.23	875.03	936.86	True	False	853.9359974874818	790.8785960625968	1094.4654498780308	799.6403592229879	964.5055408067748	618.6927867851618	868.4887654877984	951.5437318995149	834.3500462914924	767.1855756409875	1.1130761899088286	1.0308830368738537	1.4265980547973667	1.0423036936726608	1.2571997850727648	0.8064447591682636	1.1320452222556083	1.2403045131609718	1.0875465764517127	1.0	9.583431785330397														
AS(ph)PIPGTPDR	ddPTM_K562_Methotrexat_30min_R1	1	ASPIPGTPDR	10	0	Q9P2F8-2;Q9P2F8	Q9P2F8-2	SIPA1L2	Signal-induced proliferation-associated 1-like protein 2	1	AS(1)PIPGTPDR	82.494	0.026137999999999998	12143000.0	1885.4	1856.5	2442.7	2333.0	1922.8	1834.7	1742.4	1641.8	1730.9	2012.7	True	False	1802.5200735142164	2163.2550698955556	1930.010651470593	2128.4695122161725	2175.681902702096	2189.2298089001665	2133.177553934987	1584.0569634189003	1650.4308368009622	1648.1805265382384	1.0936423798794332	1.3125109992891104	1.1709946940850573	1.291405569926682	1.3200507272536444	1.3282706436887244	1.2942620784480532	0.9610943327585478	1.0013653299662812	1.0	10.686658555385636	-9.262154492170914	24.999999999867196	0.9859223559751776	1.2637170781248817	0.7553044330109658	0.07070861890212532	30.517285300109613	1066818.8061787752	0.03612377071139447	0.018987891566611008	5.468214067631373e-10	9.262154492170914	0.277794722149704	
AS(ph)PPPQGPLPGPPGALHR	ddPTM_K562_Methotrexat_30min_R1	4	ASPPPQGPLPGPPGALHR	18	0	A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74	A0A087WXV6	OTUD5	OTU domain-containing protein 5	1	AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR	170.09	2.5318e-12	450956000.0	2657.1	2472.61	3720.0099999999998	3274.1299999999997	2805.34	2135.05	2187.5600000000004	2799.0199999999995	2606.23	2811.9300000000003	True	False	2540.297065521705	2881.1667753161587	2939.2307379445347	2987.092106314762	3174.2913818006537	2547.6181956136174	2678.176015774803	2700.5768801003596	2485.0669361579357	2302.662228841194	1.103200041110719	1.2512329160695421	1.2764489299082702	1.2972341617893324	1.3785310507299646	1.1063794610014064	1.1630781024807901	1.1728063483541893	1.0792147041941693	1.0	11.169087086364092	-9.56624128874985	0.7536268432104164	1.0064778676586836	1.252755171881729	0.5066677413515458	0.07747493531239422	0.5389067497913863	0.6329194358838077	0.07732064732979818	0.032602598834432804	2.714930467283338e-10	9.56624128874985	0.24627730422304528	
AS(ph)PS(ph)PQPSSQPLQIHR	ddPTM_K562_Methotrexat_30min_R1	1	ASPSPQPSSQPLQIHR	16	0	B5MBZ0;Q9HC35	B5MBZ0	EML4	Echinoderm microtubule-associated protein-like 4	2	AS(1)PS(0.992)PQPS(0.005)S(0.003)QPLQIHR	147.07	3.1295e-09	10123000.0	627.81	770.24	1334.6	885.42	704.84	706.08	820.55	883.25	955.09	1023.4	True	False	600.212224118468	897.5090681585532	1054.4856983881173	807.7966033032334	797.5388143855552	842.5199670072654	1004.579225138517	852.1855968691342	910.6880743660699	838.0523430512416	0.7161989690681754	1.0709463145116178	1.25825756246784	0.9638975536565522	0.9516575199608871	1.0053309605218188	1.1987070180854962	1.0168644046342443	1.0866720699692467	1.0	9.710896544322434														
AS(ph)QSPLRGASDVGAGEPGPER	ddPTM_K562_Methotrexat_30min_R1	1	ASQSPLRGASDVGAGEPGPER	21	1	A0A1B0GW05	A0A1B0GW05			1	AS(0.499)QS(0.499)PLRGAS(0.002)DVGAGEPGPER	92.679	0.0081154	0.0	231.16	175.9	320.45	234.92	189.54	181.06	193.67	288.14	306.57	352.98	True	False	220.99848318316873	204.96448521121917	253.19192420835603	214.32492833682957	214.46783224368377	216.04728249820903	237.10542749689438	278.00595288069326	292.31762761457674	289.0519015538668	0.7645633258080613	0.7090923260126785	0.8759393134840595	0.7414755868571536	0.7419699752562127	0.7474342197259239	0.82028668976844	0.9617855872464653	1.0112980611549491	1.0	8.175184753059492	-9.237702469088344	2.404885328400578	1.004323858778218	0.7642026727923537	0.8594936548836546	0.04141950152113507	0.10850742798088382	1.2080820792693503	0.027299764992079284	0.012057985525286887	5.784922310619504e-10	9.237702469088344	-0.2401211859858643	
AS(ph)S(ph)T(ph)S(ph)TPEPTRK	ddPTM_K562_Methotrexat_30min_R1	1	ASSTSTPEPTRK	12	1	A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7	A0A0U1RRM6	ENAH	Protein enabled homolog	4	AS(0.992)S(0.835)T(0.746)S(0.746)T(0.681)PEPTRK	49.934	0.033744	6558900.0	56.631	0.0	124.02	117.93	0.0	0.0	0.0	0.0	0.0	0.0	True	False	54.14156904804475	0.0	97.9898968335788	107.59125999813686	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
AS(ph)SDIVSLAGPSAGPGSSEGGCSR	ddPTM_K562_Methotrexat_30min_R1	1	ASSDIVSLAGPSAGPGSSEGGCSR	24	0	V9GZ26;Q9BQ89	V9GZ26	FAM110A	Protein FAM110A	1	AS(0.5)S(0.5)DIVSLAGPSAGPGSSEGGCSR	136.14	9.625200000000001e-21	0.0	0.0	0.0	152.59	0.0	0.0	0.0	77.57600000000001	0.0	72.652	132.6	True	False	0.0	0.0	120.56344426572964	0.0	0.0	0.0	94.97439274796858	0.0	69.27442437764367	108.58485507972897	0.0	0.0	1.1103154687383	0.0	0.0	0.0	0.8746559792176649	0.0	0.6379750134287012	1.0	6.76267908642498	-10.3731653928315	0.821440154388944	1.0084636481313678	0.24293137143292712	0.2566615697254673	0.3943676462546838	1.8783247710841509	2.3009269713567067	0.39715143422113464	0.1358520373892009	4.234816603632598e-11	10.3731653928315	-0.7655322766984407	
AS(ph)SLGEIDESSELR	ddPTM_K562_Methotrexat_30min_R1	1	ASSLGEIDESSELR	14	0	Q16513-4;Q16513-3;Q16513-2;Q16513;Q16513-5	Q16513-4	PKN2	Serine/threonine-protein kinase N2	1	AS(0.511)S(0.489)LGEIDESSELR	278.36	3.319099999999999e-125	30646000.0	899.67	1220.6	1300.0	1256.4	1207.8	1219.0	1031.3	1216.8	1160.8	1284.4	True	False	860.1215840344412	1422.2834033474367	1027.1477655511399	1146.2533626868405	1366.6468702327807	1454.554497764923	1262.5952774180162	1174.0044543111942	1106.834661366085	1051.7827139095314	0.8177749763896806	1.3522597248824664	0.9765779109766674	1.0898195487793831	1.2993623608367575	1.3829420074401755	1.200433569330003	1.1162043631116148	1.052341559457583	1.0	10.038620976038162	-6.241232667655777	24.348168294006303	1.1710988353281961	0.8177744966792213	0.3652113455232272	0.13632501288291257	3928.2624257310313	4733278.829920186	0.034957111639887975	1.353619436839401	5.738089691077695e-07	6.241232667655777	-0.35332433864897483	
AS(ph)SLPGSLQR	ddPTM_K562_Methotrexat_30min_R1	1	ASSLPGSLQR	10	0	E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2	E3W994	CLASP2	CLIP-associating protein 2	1	AS(0.593)S(0.406)LPGS(0.002)LQR	90.913	0.014074000000000001	81347000.0	2591.8	2392.0	3284.6	2907.8	2623.0	2047.7	2339.2	2645.8	2416.2	2794.1	True	False	2477.8675753336947	2787.237342951882	2595.207346714827	2652.877688650745	2967.97047575806	2443.3890443586797	2863.8251458704776	2552.745714346285	2303.87138938037	2288.0614146174257	1.0829550113924742	1.218165441340621	1.1342384999524837	1.1594433924293583	1.2971550749455376	1.0678861278586902	1.251638232948971	1.1156805923293434	1.0069097685324098	1.0	11.159910061155523	-9.655855136566858	3.4977630109170152	1.000296267572555	1.1741604835543757	0.4996422119958487	0.06695907165825926	0.18334044433502336	4.128537537695794	0.051637602743523935	0.016372573534801323	2.2087413587681333e-10	9.655855136566858	0.17386421598182067	
AS(ph)T(ph)LPLYAWINT(ph)CK	ddPTM_K562_Methotrexat_30min_R1	1	ASTLPLYAWINTCK	14	0	Q8NE18-3;Q8NE18-2;Q8NE18	Q8NE18-3	NSUN7	Putative methyltransferase NSUN7	3	AS(1)T(1)LPLY(0.002)AWINT(0.999)CK	54.511	0.034211	0.0	2270.6	2138.9	2551.2	2228.7	2136.9	1958.3	2338.3	2374.2	2283.5	2142.4	True	False	2170.787142739673	2492.316869916296	2015.7379842108219	2033.3133312799757	2417.9398054317185	2336.7137596169387	2862.7232979603887	2290.698040290629	2177.340583416139	1754.390599719542	1.2373454024928636	1.4206168628096385	1.1489676156114033	1.1589855369750741	1.3782220480537526	1.331923324253155	1.6317479690201404	1.3056944335296947	1.241080853809984	1.0	10.776754271636703	-7.784350588944181	24.968307983435945	1.3467685904277644	1.2476664252434908	0.024471027133178613	0.16221977399638254	648.2377155047182	706436.5730391357	0.05026357793555312	0.05703178900599148	1.643044821905942e-08	7.784350588944181	-0.09910216518427362	
AS(ph)TPQPAPAGVPALASQHPPEEEVHYHLPVAR	ddPTM_K562_Methotrexat_30min_R1	1	ASTPQPAPAGVPALASQHPPEEEVHYHLPVAR	32	0	Q96T58	Q96T58	SPEN	Msx2-interacting protein	1	AS(0.536)T(0.464)PQPAPAGVPALASQHPPEEEVHYHLPVAR	81.31	3.5962999999999998e-06	52018000.0	1248.4	912.54	1185.0	1240.4	1063.0	947.76	1270.4	1231.4	1476.6	1382.0	True	False	1193.5218307919524	1063.32172447212	936.2846939831551	1131.6560578452386	1202.803132188646	1130.901206564137	1555.3195388653617	1188.0909640358364	1407.953188295279	1131.7064081461951	1.0546214302585903	0.9395738301189851	0.8273211914712466	0.9999555093966119	1.062822586786366	0.9992885066513169	1.3743136273418042	1.0498226001759614	1.2440975664365046	1.0	10.144284021588014	-8.17345978471384	1.591445066512517	1.163563699915067	0.9460609332215334	0.3499191720890221	0.11743053529776115	0.39101937606446113	1.9766134045255723	0.048131353498213035	0.046752246433641564	6.707183917585835e-09	8.17345978471384	-0.21750276669353352	
AS(ph)VRGSSEEDEDART(ph)PDR	ddPTM_K562_Methotrexat_30min_R1	1	ASVRGSSEEDEDARTPDR	18	2	Q8NC56;H7C2Z0	Q8NC56	LEMD2	LEM domain-containing protein 2	2	AS(0.766)VRGS(0.166)S(0.068)EEDEDART(1)PDR	93.215	0.019446	5967800.0	2399.1	2157.3	2853.4	2527.9	2327.6	2367.9	1907.9	2527.1	2765.6	3249.7	True	False	2293.638436601228	2513.757157169773	2254.5103340181718	2306.282931817946	2633.7201980078	2825.4631626395067	2335.7951418460525	2438.220460626084	2637.0278596433864	2661.1478397631618	0.8618981637658126	0.9446138691014979	0.8471946955862549	0.8666496830267054	0.9896933040150814	1.0617460332045923	0.8777397132712231	0.9162288634227409	0.9909362494787505	1.0	11.377832946006235	-7.759106451654275	24.994306701969354	0.9682373588850335	0.8823484045817149	0.4274177135386945	0.052345470319856	69.36427948058929	743140.52565352	0.01665694099560496	0.020481716489656587	1.7413799844754953e-08	7.759106451654275	-0.08588895430331855	
ASAGHVAVSS(ph)PTPETGPLQR	ddPTM_K562_Methotrexat_30min_R1	3	ASAGHVAVSSPTPETGPLQR	20	0	P42695	P42695	NCAPD3	Condensin-2 complex subunit D3	1	ASAGHVAVS(0.034)S(0.863)PT(0.103)PETGPLQR;ASAGHVAVS(0.083)S(0.906)PT(0.011)PETGPLQR;ASAGHVAVS(0.184)S(0.625)PT(0.184)PET(0.006)GPLQR	192.27	2.1539e-16	102921900.0	7215.0	6407.2	8097.5	7211.799999999999	6404.299999999999	6165.9	6540.200000000001	7134.6	6542.299999999999	7700.1	True	False	6897.837238997064	7465.88089622128	6397.945408884894	6579.552691041837	7246.577704116405	7357.372910392729	8007.006335081263	6883.67207407022	6238.149900978058	6305.5372745054365	1.0939333063474885	1.1840197862928108	1.0146550770150995	1.0434563153950893	1.1492403245978395	1.1668114214692025	1.269837285310359	1.0916868419606842	0.9893129846682789	1.0	12.62240358784695	-9.668860674028542	4.5450244903434145	0.9948095874951685	1.13097158016269	0.3831082188697673	0.06830485193523667	0.23651107347038297	8.292865707973103	0.05677480946636982	0.019190721791685128	2.143578171933981e-10	9.668860674028542	0.1361619926675216	
ASAHAITGPPT(ph)ELIT(ph)SEVT(ph)AR	ddPTM_K562_Methotrexat_30min_R1	1	ASAHAITGPPTELITSEVTAR	21	0	H0YBB2;Q4G0W3;J3QT83;Q05707-3;Q05707-2;Q05707	H0YBB2	COL14A1	Collagen alpha-1(XIV) chain	3	AS(0.003)AHAIT(0.014)GPPT(0.981)ELIT(0.955)S(0.188)EVT(0.858)AR	67.952	0.0043415	12405000.0	22242.0	19939.0	22971.0	22925.0	19548.0	19232.0	19272.0	21002.0	20564.0	22417.0	True	False	21264.268311818807	23233.580844948832	18149.701017288648	20915.20084335867	22118.904635958268	22948.311813794095	23594.236581402107	20263.34775595309	19607.984128473618	18357.064074828686	1.1583697820707886	1.265647968010683	0.9887039094762231	1.1393543519869125	1.20492604622369	1.250107954096045	1.2852946683208817	1.1038446928851935	1.0681437973167072	1.0	14.164047720252174	-12.030035690362885	6.12971994725635	0.9999998142276527	1.16561938535768	0.23257654243554093	0.08852701269212873	2.3886906191772886e-07	3.769674474079549e-08	0.09015616552384294	0.021866057193279914	9.33177609018832e-13	12.030035690362885	0.16561957113002723	
ASALLFSS(ph)DEEDQWNIPASQTHLASDSR	ddPTM_K562_Methotrexat_30min_R1	4	ASALLFSSDEEDQWNIPASQTHLASDSR	28	0	A0A087WYF6;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;A0A0A0MR88;A0A096LPC5;Q9Y4E1-5;Q9Y4E1-6;Q9Y4E1	A0A087WYF6;A0A0A0MR88	FAM21A;FAM21C	WASH complex subunit FAM21A;WASH complex subunit FAM21C	1	ASALLFS(0.189)S(0.811)DEEDQWNIPASQTHLASDSR;ASALLFS(0.181)S(0.818)DEEDQWNIPASQTHLASDSR;ASALLFS(0.061)S(0.938)DEEDQWNIPASQTHLASDSR;ASALLFS(0.078)S(0.922)DEEDQWNIPASQTHLASDSR	161.26	1.4293e-35	205164000.0	6763.0	6463.5	8243.699999999999	7537.700000000001	7351.2	6809.1	6304.3	9158.4	8380.8	9545.9	True	False	6465.706617787551	7531.483514284909	6513.460026826101	6876.881544034226	8318.011651312487	8124.86220732661	7718.199755092014	8836.293880969462	7991.178437264713	7817.04500833774	0.8271292554784017	0.963469380853219	0.8332381379253642	0.8797290455279807	1.064086447300791	1.0393776930618346	0.9873551638579161	1.1303880010342247	1.0222761195235848	1.0	12.932407629088356	-7.75714068918389	24.98888972367553	1.0443785648174309	0.8791003202037214	0.7185754035514853	0.05044159605004566	56.266187723494575	327080.8693536102	0.014572582164219035	0.018154077194782525	1.7492799196659704e-08	7.75714068918389	-0.16527824461370944	
ASAMPDS(ph)PAEVK	ddPTM_K562_Methotrexat_30min_R1	2	ASAMPDSPAEVK	12	0	O75081;H3BNI7	O75081	CBFA2T3	Protein CBFA2T3	1	ASAMPDS(1)PAEVK;ASAMPDS(1)PAEVK	123.28	0.00074899	82907000.0	9754.4	6431.9	13022.5	9066.599999999999	7522.4	6376.7	5919.2	8854.6	8791.0	11013.7	True	False	9325.608255588773	7494.662151393067	10289.255212992091	8271.745254804611	8511.727452093946	7608.907026987352	7246.731277118896	8543.17869916494	8382.308328798457	9019.012205064944	1.0339944157467322	0.8309848108625659	1.1408405908591406	0.9171453665579166	0.9437538456056069	0.8436519270607375	0.8034950072524837	0.9472410619831756	0.9294042560549011	1.0	13.138753717600425	-7.494289290412444	24.961475140572716	0.9026329446794158	0.9922025201568558	0.17422370093577988	0.08775872530009057	1207.5396558704738	1054304.089423631	0.024341727641942427	0.03602418659898696	3.2041342890468094e-08	7.494289290412444	0.08956957547744004	
ASAMPDS(ph)PAEVKTQPR	ddPTM_K562_Methotrexat_30min_R1	3	ASAMPDSPAEVKTQPR	16	1	O75081;H3BNI7	O75081	CBFA2T3	Protein CBFA2T3	1	AS(0.001)AMPDS(0.984)PAEVKT(0.015)QPR;AS(0.001)AMPDS(0.998)PAEVKT(0.001)QPR;ASAMPDS(1)PAEVKTQPR	128.85	0.00015422	20827000.0	8446.0	5416.6	12212.0	9975.1	5906.6	5470.25	5876.54	7592.6	7536.1	10391.900000000001	True	False	8074.72395295485	6311.601083542295	9648.868086854245	9100.598470341854	6683.42143046609	6527.298393272003	7194.503686180612	7325.563954473356	7185.7483558933045	8509.826210430136	0.9488706059658423	0.7416838989974238	1.1338501925019377	1.0694223648407337	0.7853769589647438	0.7670307514942865	0.8454348547520996	0.8608359058490196	0.844406005270241	1.0	13.054913953834104	-7.7747798599949665	24.996883395255868	0.8391277463044113	0.9683582523205936	0.22223615140605735	0.11129622784553914	357.15836931103433	669227.1816080551	0.03590611316429662	0.04094388622680886	1.6796552046390612e-08	7.7747798599949665	0.12923050601618224	
ASAPS(ph)PNAQVACDHCLK	ddPTM_K562_Methotrexat_30min_R1	4	ASAPSPNAQVACDHCLK	17	0	A0A3B3IUA7;Q14258	A0A3B3IUA7	TRIM25	E3 ubiquitin/ISG15 ligase TRIM25	1	AS(0.001)APS(0.999)PNAQVACDHCLK;AS(0.002)APS(0.998)PNAQVACDHCLK;AS(0.007)APS(0.993)PNAQVACDHCLK;ASAPS(1)PNAQVACDHCLK	262.37	8.823599999999998e-95	251049000.0	19003.2	14096.6	24048.7	18920.4	14702.399999999998	12455.599999999999	12536.0	18722.2	17795.899999999998	22491.5	True	False	18167.842081789193	16425.823548769025	19001.20651493054	17261.67790781607	16636.023302624973	14862.468418671666	15347.517112103409	18063.729614156033	16968.572493284537	18418.07140290893	0.986413923822653	0.8918318964804725	1.0316610300429998	0.937214191985909	0.9032445872697344	0.8069503094837772	0.8332857863543432	0.9807611893231704	0.9213001797031007	1.0	14.168834381091155	-7.6305633486437685	4.126265062735615	0.8980382981447025	0.9651114324770989	0.14906135337879056	0.0637662190970646	0.39706339102744087	12.290652230642294	0.019970873456263374	0.026207988421088308	2.3411899510844564e-08	7.6305633486437685	0.06707313433239637	
ASASRPQPAPADGADPPPAEEPEARPDGEGS(ph)PGK	ddPTM_K562_Methotrexat_30min_R1	2	ASASRPQPAPADGADPPPAEEPEARPDGEGSPGK	34	2	P11274;P11274-2	P11274	BCR	Breakpoint cluster region protein	1	ASASRPQPAPADGADPPPAEEPEARPDGEGS(1)PGK;ASASRPQPAPADGADPPPAEEPEARPDGEGS(1)PGK	51.312	0.00233	76904000.0	7211.0	4943.5	10467.4	6938.3	5659.7	5069.4	4568.0	6793.3	7215.4	8968.2	True	False	6894.013074207602	5760.329349867321	8270.435785484617	6330.030011405693	6404.049752820391	6048.989803912627	5592.490281436537	6554.375788520907	6879.957628894593	7343.972076365204	0.9387308397310379	0.7843615539342186	1.1261529455022048	0.8619354683792115	0.8720144475263291	0.8236673207649899	0.7615075633844813	0.8924837567962136	0.9368169646281841	1.0	12.842344857933684	-5.9132602461833965	19.99346094625296	0.8893433451733014	3.6174266477289985	0.012922599659470513	0.10164412184448457	2330.217300885945	561749.0358772324	0.02459557426196397	13179.071948792604	1.221067729502416e-06	5.9132602461833965	2.728083302555697	
ASATCSSATAAASSGLEEWT(ph)SRSPR	ddPTM_K562_Methotrexat_30min_R1	1	ASATCSSATAAASSGLEEWTSRSPR	25	1	A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3;Q96G74-4	A0A087WXV6	OTUD5	OTU domain-containing protein 5	1	ASATCSSATAAAS(0.023)S(0.017)GLEEWT(0.469)S(0.469)RS(0.023)PR	62.707	0.025566	16890000.0	240.38	290.88	416.43	364.08	249.37	282.67	275.29	343.0	356.43	443.59	True	False	229.8131830228849	338.94297588538615	329.0270338526625	332.16167167066646	282.16652593968263	337.29197693454535	337.0307901875358	330.9364955857494	339.85964709744457	363.2515525250151	0.6326557489580419	0.9330805980851109	0.9057828702053634	0.9144122560846931	0.7767799586217912	0.9285355412522784	0.9278165168043607	0.911039452647514	0.9356041143803242	1.0	8.504825153676485	-6.258288266859291	24.91933559502243	0.9082350193506464	0.6326556428478192	0.7184994520632701	0.05283483762602871	156.35243804820428	1236389.7407340128	0.01305793668294754	0.09063055716817313	5.517111145157636e-07	6.258288266859291	-0.27557937650282727	
ASAVSELS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	6	ASAVSELSPR	10	0	Q9Y2W1;A0A3B3ITZ9	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	1	ASAVSELS(1)PR;ASAVS(0.002)ELS(0.998)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR	115.29	0.0030969	10946490000.0	17997.3	14945.2	20326.699999999997	18040.3	17193.6	15375.500000000002	15549.2	17921.1	17972.300000000003	18514.7	True	False	17206.16024135854	17414.64027503532	16060.403450791053	16458.734908372677	19454.859768201957	18346.59776897831	19036.503915086025	17290.804755223828	17136.771695787105	15161.508418888829	1.134858073878876	1.1486086868071417	1.0592879683912153	1.0855605163842215	1.2831744197671187	1.2100773394104618	1.2555811327697162	1.1404409295899762	1.1302814484103318	1.0	13.888125673968242														
ASAVSELS(ph)PRER	ddPTM_K562_Methotrexat_30min_R1	4	ASAVSELSPRER	12	1	Q9Y2W1;A0A3B3ITZ9	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	1	ASAVS(0.002)ELS(0.998)PRER;ASAVSELS(1)PRER;ASAVSELS(1)PRER;ASAVSELS(1)PRER	144.88	2.4643e-08	130445000.0	11026.6	9184.6	12273.400000000001	15242.1	9237.2	9376.5	10172.9	9428.6	9323.199999999999	11936.699999999999	True	False	10541.883866878037	10702.19903849325	9697.381065934893	13905.848757886903	10452.053708986792	11188.375921487113	12454.431782842763	9096.99079381864	8889.766466960953	9774.847961012072	1.0784703668973024	1.094871151058309	0.9920748746797737	1.4226153504741688	1.0692804379848997	1.1446086901927308	1.2741304859695486	0.9306529196262561	0.9094531702609235	1.0	13.254858547429928	-9.282823957054072	24.083712145178144	0.9400397044143067	1.1519847898101556	0.40153230447730737	0.11572005297189325	529.0519629531351	595823.4028667012	0.06308236344115963	0.03035606239441452	5.214060222196076e-10	9.282823957054072	0.2119450853958489	
ASAVTAMGQLS(ph)SQGLHAPTSPEHAEAR	ddPTM_K562_Methotrexat_30min_R1	1	ASAVTAMGQLSSQGLHAPTSPEHAEAR	27	0	Q6PJG6	Q6PJG6	BRAT1	BRCA1-associated ATM activator 1	1	ASAVTAMGQLS(0.497)S(0.497)QGLHAPT(0.003)S(0.003)PEHAEAR	115.88	2.3333000000000005e-11	21907000.0	549.64	393.16	669.29	425.64	390.22	486.9	406.64	607.04	630.52	588.7	True	False	525.4784837203529	458.1230074226433	528.8151753890176	388.3248020487323	441.5407697484978	580.9865340129124	497.83937128794946	585.6900591264526	601.2072628226597	482.08072538036527	1.0900217661798166	0.9503035141286366	1.0969432038001072	0.8055182080601566	0.9159062922503671	1.2051644121521552	1.032688811391807	1.21492112895478	1.2471091067752247	1.0	8.913130938625141	-8.260251565893627	24.99961197371948	1.1467037719311783	0.9682691019200822	0.3828409956181511	0.10658664096682231	113.7831110246672	2394775.840213309	0.0363650651663911	0.03446387638873357	5.4922264345186745e-09	8.260251565893627	-0.17843467001109614	
ASAVTAMGQLSS(ph)QGLHAPTSPEHAEAR	ddPTM_K562_Methotrexat_30min_R1	2	ASAVTAMGQLSSQGLHAPTSPEHAEAR	27	0	Q6PJG6	Q6PJG6	BRAT1	BRCA1-associated ATM activator 1	1	ASAVTAMGQLS(0.102)S(0.62)QGLHAPT(0.232)S(0.046)PEHAEAR;ASAVT(0.001)AMGQLS(0.211)S(0.788)QGLHAPTSPEHAEAR	140.2	8.4152e-21	33127000.0	2641.7799999999997	2045.5	2435.58	2096.89	2393.48	2179.24	2037.21	2559.94	2346.44	2758.89	True	False	2525.6505143780546	2383.484107444849	1924.3850421700358	1913.0589093317508	2708.264572747768	2600.347287702402	2494.106201016927	2469.9054592121965	2237.3545165539585	2259.228286809303	1.1179262091946531	1.0549992319771422	0.8517886631491479	0.8467753880833152	1.198756490683213	1.1509891686841702	1.1039637807206022	1.0932518301195813	0.9903180345328286	1.0	11.141614341850543	-7.76627302239006	24.999620917841593	1.09800212052035	0.9658040305059675	0.2750318282295523	0.09616744879677097	165.03216435137276	853546.0979259649	0.0318198095908323	0.03724379441389581	1.7128801543757446e-08	7.76627302239006	-0.13219809001438254	
ASDPQS(ph)PPQVSR	ddPTM_K562_Methotrexat_30min_R1	1	ASDPQSPPQVSR	12	0	Q7L7X3-2;Q7L7X3-3;Q7L7X3	Q7L7X3-2	TAOK1	Serine/threonine-protein kinase TAO1	1	AS(0.001)DPQS(0.997)PPQVS(0.002)R	84.734	0.026975	17134000.0	1539.8	1114.4	1484.9	1597.2	1139.3	1320.6	1231.3	1309.9	1432.1	1499.9	True	False	1472.1122357044615	1298.5356584387862	1173.2397823591448	1457.1759558129756	1289.137919569637	1575.7872598427857	1507.4503685492127	1263.8300745416118	1365.5219835823302	1228.2535756718364	1.1985409730228043	1.0572211505498825	0.955209743002295	1.1863803897464105	1.04956984868902	1.282949458527612	1.2273120130952273	1.02896510913906	1.1117590134719617	1.0	10.262392723707475	-6.237782393483	22.495705861258212	1.1071402168993358	1.1985413758999146	0.0778455204122589	0.09906058488107772	5052.431116834082	4804124.179786745	0.02553653160295849	1.1868039496721177	5.783857793589402e-07	6.237782393483	0.09140115900057877	
ASDS(ph)MDSLYSGQSSSSGITSCSDGTSNRDSFR	ddPTM_K562_Methotrexat_30min_R1	1	ASDSMDSLYSGQSSSSGITSCSDGTSNRDSFR	32	1	Q9NSI8;A0A2R8Y4K8;Q9NSI8-3;S6FRS6	Q9NSI8	SAMSN1	SAM domain-containing protein SAMSN-1	1	AS(0.082)DS(0.602)MDS(0.174)LY(0.056)S(0.026)GQS(0.026)S(0.011)S(0.011)S(0.011)GIT(0.001)S(0.001)CSDGTSNRDSFR	45.357	0.021729	18271000.0	345.41	249.9	338.72	523.88	294.8	300.16	221.9	346.3	441.85	366.19	True	False	330.22618998225596	291.191727426286	267.62730088267875	477.95225377617214	333.57136723350186	358.1616719024768	271.6667236100629	334.12043271529154	421.30848994194065	299.8694425463496	1.1012332139551506	0.9710616892258959	0.8924794024029731	1.593867816999383	1.1123886595478734	1.194392028948122	0.9059500071204236	1.1142196746627422	1.4049730654927293	1.0	8.228190705202591														
ASEDTTSGS(ph)PPKK	ddPTM_K562_Methotrexat_30min_R1	3	ASEDTTSGSPPKK	13	1	H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5	H0YER7	API5	Apoptosis inhibitor 5	1	ASEDT(0.141)T(0.108)S(0.083)GS(0.668)PPKK;ASEDT(0.047)T(0.002)S(0.022)GS(0.929)PPKK;ASEDT(0.008)TS(0.002)GS(0.99)PPKK	175.28	1.7714e-07	74341000.0	9480.0	5955.5	17750.2	10077.3	5943.7	5094.4	4546.7	7741.4	8059.7	12031.3	True	False	9063.270551031492	6939.545148808505	14024.675590835275	9193.838755017587	6725.400730752254	6078.820700093207	5566.413214231058	7469.130574132713	7685.006306178699	9852.314984319328	0.9199127885635349	0.7043568095268262	1.4234903789775866	0.9331653291282552	0.6826213678162154	0.6169941490673095	0.5649853078276941	0.7581091942371285	0.7800203625655434	1.0	13.266247037047401	-7.674539381970077	5.012011997048815	0.7077408149757634	1.0129752814793156	0.2917834076873088	0.19913705922059768	0.2483534447590908	10.628039215662808	0.060412618122856414	0.07799439296108743	2.1157318212668868e-08	7.674539381970077	0.30523446650355224	
ASEIDQVVPAAQS(ph)SPINCEKR	ddPTM_K562_Methotrexat_30min_R1	1	ASEIDQVVPAAQSSPINCEKR	21	1	C9JWX4;C9JC88;O94782	C9JWX4	USP1	Ubiquitin carboxyl-terminal hydrolase 1	1	ASEIDQVVPAAQS(0.5)S(0.5)PINCEKR	61.903999999999996	0.013316	90449000.0	2840.7	2787.3	3205.0	3019.0	2800.3	2718.2	2316.3	2657.8	2527.5	3348.2	True	False	2715.826229358139	3247.8539490007447	2532.314298916465	2754.3289572998838	3168.5885334598906	3243.4536799217494	2835.789237935955	2564.32366754462	2409.997076673654	2741.808535278645	0.9905236614496622	1.1845662843378197	0.923592682105029	1.0045664829838186	1.155656382526314	1.1829614060166762	1.0342769020695892	0.9352672276527187	0.8789808061592931	1.0	11.420912113675508	-9.18665298263932	4.02157228764037	0.929354520073994	1.0745303081082287	0.3309689262910832	0.08551140282400042	0.26437323254494116	8.171583330302878	0.04561996101230415	0.02453775819654605	6.506493756178187e-10	9.18665298263932	0.1451757880342347	
ASEPLLS(ph)PPPFGESR	ddPTM_K562_Methotrexat_30min_R1	5	ASEPLLSPPPFGESR	15	0	O14686;O14686-3	O14686	KMT2D	Histone-lysine N-methyltransferase 2D	1	ASEPLLS(1)PPPFGESR;ASEPLLS(1)PPPFGESR;AS(0.001)EPLLS(0.999)PPPFGESR;AS(0.007)EPLLS(0.993)PPPFGESR;AS(0.119)EPLLS(0.881)PPPFGESR	207.85	4.3289999999999997e-19	231105800.0	9073.23	6537.5199999999995	8825.689999999999	8018.18	6250.450000000001	6169.66	6790.37	7857.679999999999	7478.290000000001	8218.78	True	False	8674.38167317884	7617.734061160026	6973.298279190032	7315.238608427554	7072.493732444515	7361.859477178287	8313.283325822718	7581.320940624581	7130.625930175209	6730.2793003934785	1.2888590927677699	1.1318600196450486	1.0361083051608788	1.0869145665321611	1.0508469881823521	1.0938415998200675	1.2352062900772471	1.1264496764913379	1.0594844005594724	1.0	12.71645066125571	-15.999895622455671	0.015374554453703535	3.7750830164536867e-07	1.961342263467587	0.23410947798120485	0.07467634263027084	11231.63371613689	13.066597967932257	1049.5572193633866	659.3395386036883	1.000240367061148e-16	15.999895622455671	1.9613418859592853	
ASESSKPWPDATYGT(ph)GSASR	ddPTM_K562_Methotrexat_30min_R1	2	ASESSKPWPDATYGTGSASR	20	1	Q9Y2W1;A0A3B3ITZ9	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	1	ASESSKPWPDAT(0.005)YGT(0.347)GS(0.347)AS(0.301)R;ASESSKPWPDAT(0.001)YGT(0.536)GS(0.353)AS(0.11)R	86.825	0.012161	35623000.0	2267.7	1340.52	2368.3999999999996	2259.0	1536.2800000000002	1520.37	1373.06	1798.3200000000002	1919.2399999999998	2922.4	True	False	2168.0146232673105	1562.0181450559608	1871.3052061010153	2060.9569773237613	1738.3277478069347	1814.1599850425398	1681.0036571430041	1735.072066302521	1830.014951309651	2393.125041365007	0.9059345357193302	0.6527106265057534	0.7819504512951181	0.8611990354453934	0.7263840032426453	0.7580715398004305	0.7024303486391091	0.7250235722379382	0.764696754109361	1.0	11.224680064674411	-12.389000710404163	7.447366642243705	1.0000067564302606	0.7600874170044655	0.5032207905432138	0.07015536288717882	7.580222131972166e-06	6.219553828090592e-07	0.06542512971777566	0.015867478054812784	4.083187184182542e-13	12.389000710404163	-0.23991933942579513	
ASESSKPWPDATYGTGS(ph)ASR	ddPTM_K562_Methotrexat_30min_R1	2	ASESSKPWPDATYGTGSASR	20	1	Q9Y2W1;A0A3B3ITZ9	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	1	ASESSKPWPDAT(0.003)YGT(0.132)GS(0.806)AS(0.059)R;ASESSKPWPDATYGT(0.006)GS(0.92)AS(0.074)R	121.5	1.768e-05	54173000.0	4657.4	3124.3999999999996	5095.4	5402.0	2954.7	2625.6	2964.5	3968.4	4672.3	5690.9	True	False	4452.6662726133	3640.653994280462	4025.945172760985	4928.415047146064	3343.2948397721434	3132.9600404688917	3629.364588292162	3828.829122689466	4455.085792815954	4660.222864051507	0.9554620889401497	0.7812188602317934	0.8638954166369861	1.0575492183353215	0.7174109344774013	0.6722768699832431	0.778796356776994	0.8215978579532475	0.9559812744540697	1.0	12.186183234643295	-9.848091801638652	3.9321724597947694	0.9966977825513766	0.8269316814733833	0.23955449213901514	0.10566079940889435	0.32756560048428046	8.895373104348554	0.10717379870294624	0.028660571036874746	1.4187575914718474e-10	9.848091801638652	-0.1697661010779934	
ASETVSEAS(ph)PGSTASQTGVPTQVVQQVQGTQQR	ddPTM_K562_Methotrexat_30min_R1	1	ASETVSEASPGSTASQTGVPTQVVQQVQGTQQR	33	0	P22670	P22670	RFX1	MHC class II regulatory factor RFX1	1	AS(0.002)ET(0.007)VS(0.019)EAS(0.608)PGS(0.208)T(0.066)AS(0.066)QT(0.022)GVPT(0.003)QVVQQVQGTQQR	82.835	3.4196e-06	16255000.0	719.33	579.59	840.67	706.86	692.73	637.31	676.21	719.11	775.65	572.89	True	False	687.7091145014219	675.3573961544653	664.2248554352902	644.8906812709489	783.8361371223338	760.4611377937351	827.8673058691331	693.8184937045719	739.5902007999681	469.1340695823977	1.4659116851470413	1.4395829251020682	1.4158529480209223	1.3746404771774559	1.6708147797069395	1.6209889391974108	1.7646710387204747	1.478934357340916	1.5765007249597507	1.0	8.873856466206064	-12.220264260316128	5.956310140187528	0.9999878666662961	1.5349758556289703	0.6517395256861634	0.11715061963874361	2.0860955928868564e-05	2.7307077239635395e-06	0.12535856608167342	0.030403229486471728	6.021930510201746e-13	12.220264260316128	0.5349879889626742	
ASETVSEASPGS(ph)TASQTGVPTQVVQQVQGTQQR	ddPTM_K562_Methotrexat_30min_R1	1	ASETVSEASPGSTASQTGVPTQVVQQVQGTQQR	33	0	P22670	P22670	RFX1	MHC class II regulatory factor RFX1	1	AS(0.001)ET(0.002)VS(0.006)EAS(0.185)PGS(0.212)T(0.212)AS(0.212)QT(0.161)GVPT(0.01)QVVQQVQGTQQR	81.532	4.1463e-06	13986000.0	434.89	343.37	470.82	495.67	251.14	234.97	344.37	494.18	441.91	537.97	True	False	415.7727563225825	400.10605620793825	372.00131613599063	452.2153806773215	284.16931196411696	280.37462702200503	421.6037386642509	476.7994092961098	421.36570055503654	440.5384199641159	0.9437831922955762	0.9082205729991244	0.8444242301642886	1.0265061120302668	0.6450500094572091	0.6364362659784428	0.9570192281948817	1.0823106173916626	0.9564788936895876	1.0	8.78312403383447	-8.987189797904056	24.998600087986546	1.0155698784524712	0.8346215489056582	0.3292478855926455	0.11732524264966598	280.5586838444337	547498.0207148194	0.05307222618695928	0.03575734499841213	1.0299359134809125e-09	8.987189797904056	-0.18094832954681295	
ASFDHS(ph)PDSLPLR	ddPTM_K562_Methotrexat_30min_R1	2	ASFDHSPDSLPLR	13	0	H0Y6H0;Q8NB78-2;Q8NB78	H0Y6H0	KDM1B	Lysine-specific histone demethylase 1B	1	ASFDHS(0.999)PDS(0.001)LPLR;AS(0.004)FDHS(0.994)PDS(0.002)LPLR	136.3	2.2125e-05	89179000.0	5966.200000000001	5114.759999999999	7300.6	6700.1	5098.59	5004.19	5146.2	5937.3	5996.700000000001	6345.6	True	False	5703.932991726168	5959.887153945053	5768.303828602043	6112.712635576334	5769.143952724086	5971.178894315217	6300.366349896822	5728.481793706322	5717.914725890767	5196.350349878793	1.097680604206992	1.146937129457422	1.1100683056785405	1.1763472868450673	1.1102299814828025	1.1491101431323807	1.2124598854355115	1.1024048433993563	1.1003712877104483	1.0	12.34328298854124	-10.133485115227582	1.7024086404166912	1.0008776910295092	1.1417196570581483	0.6102149423921968	0.03366789883561062	0.3652573636941245	2.1692533429346836	0.031854965960557105	0.009102798323395484	7.353851992350814e-11	10.133485115227582	0.14084196602863908	
ASFRSLNLQAES(ph)VRGFNMGR	ddPTM_K562_Methotrexat_30min_R1	1	ASFRSLNLQAESVRGFNMGR	20	2	Q12923-3;Q12923;Q12923-4	Q12923-3	PTPN13	Tyrosine-protein phosphatase non-receptor type 13	1	ASFRSLNLQAES(1)VRGFNMGR	81.346	0.029536	27710000.0	0.0	0.0	59.593	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	47.0852436865301	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
ASGDPGASGMS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	ASGDPGASGMSPR	13	0	Q8NDT2	Q8NDT2	RBM15B	Putative RNA-binding protein 15B	1	ASGDPGASGMS(1)PR;ASGDPGAS(0.005)GMS(0.995)PR	144.51	1.5894e-08	10176800.0	6570.4	5979.200000000001	7721.299999999999	7183.1	5940.5	5283.0	5438.7	6756.0	6565.1	6766.3	True	False	6281.57308317482	6967.161170977386	6100.704647807707	6553.368775482213	6721.779874662882	6303.864980879478	6658.466920676199	6518.387650662747	6259.889933954587	5540.857503212442	1.1336824813727715	1.2574156918740487	1.101039801920674	1.1827354830335817	1.213129893841481	1.1377056668980685	1.2017033314456829	1.1764221777736674	1.129769161239983	1.0	12.435893549727016	-10.173834146545747	2.3917050921347656	1.000087887179031	1.1768991590178437	0.6130157166729442	0.04199729311111176	0.424306144562759	4.347617739270253	0.0377413505927869	0.01026811844757634	6.701404816376763e-11	10.173834146545747	0.17681127183881262	
ASGQAFELILS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	14	ASGQAFELILSPR	13	0	A2A2D0;P16949;P16949-2	A2A2D0	STMN1	Stathmin	1	ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR	199.15	3.9645e-21	9851669900.0	45437.030000000006	36999.93	46746.93000000001	41778.8	35139.97	33140.43	34178.02	38272.85999999999	39381.92999999999	44704.91	True	False	43439.67256596352	43113.53954122311	36935.38822759661	38116.11746977157	39761.491985903114	39544.34906838683	41843.31100891929	36926.781820536424	37551.072670135094	36608.41759956505	1.186603393818356	1.1776947043385821	1.0089315695534309	1.0411845135372482	1.0861297644937138	1.0801982620755686	1.1429969868300573	1.0086964758885169	1.0257496808761613	1.0	15.159887793984064	-6.746754164466142	24.894998518040026	1.0550309966161644	1.182149175733256	0.6122916472653506	0.04210439565087249	158.59585300382963	268853.83442120755	0.011212926542344842	0.02938131828261393	1.7916197263628708e-07	6.746754164466142	0.12711817911709167	
ASHDPLVPNSS(ph)PLPTNGISGSPESFASSLDGSGHAGPEGSR	ddPTM_K562_Methotrexat_30min_R1	1	ASHDPLVPNSSPLPTNGISGSPESFASSLDGSGHAGPEGSR	41	0	O95402;B8ZZF3	O95402	MED26	Mediator of RNA polymerase II transcription subunit 26	1	ASHDPLVPNS(0.34)S(0.407)PLPT(0.084)NGIS(0.084)GS(0.084)PES(0.001)FASSLDGSGHAGPEGSR	85.751	7.845700000000001e-14	22338000.0	921.11	922.86	1375.2	1048.2	1037.9	1146.4	1086.8	1278.4	1507.1	1485.5	True	False	880.6191073059722	1075.346929062113	1086.5643132199443	956.3059334354884	1174.402042237624	1367.925575256527	1330.542565206923	1233.4379473959825	1437.035249952469	1216.4615552106898	0.7239185681897279	0.8839958192315122	0.8932171416068736	0.7861374075811688	0.9654247084152355	1.1245119661998721	1.0937810237467591	1.0139555517497243	1.1813240161984209	1.0	10.24847501103517	-7.987956922684969	3.7365030638377785	1.082901153845918	0.8322579241511167	0.7731461287125831	0.06638192121173522	0.10620898493930175	3.259967601249779	0.02133246153383604	0.023301079274425786	1.0281182712808778e-08	7.987956922684969	-0.25064322969480124	
ASHNELPHTELSSQTPYT(ph)LNFSFEELNTLGLDEGAPR	ddPTM_K562_Methotrexat_30min_R1	2	ASHNELPHTELSSQTPYTLNFSFEELNTLGLDEGAPR	37	0	Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5;H0Y8E4;E9PH70;A0A1W2PPB7	Q9ULH0-2	KIDINS220	Kinase D-interacting substrate of 220 kDa	1	ASHNELPHTELS(0.002)S(0.008)QT(0.026)PY(0.297)T(0.333)LNFS(0.333)FEELNTLGLDEGAPR;ASHNELPHT(0.002)ELS(0.049)S(0.198)QT(0.058)PY(0.217)T(0.237)LNFS(0.237)FEELNT(0.002)LGLDEGAPR	72.214	1.7947e-06	24134700.0	1343.72	916.12	976.6	1368.54	1060.57	1133.08	1011.6099999999999	1268.53	1468.21	1848.04	True	False	1284.6516777248987	1067.4932586225243	771.6250060286486	1248.5622229954238	1200.053544595778	1352.0316737715166	1238.489293696149	1223.915080890351	1399.9532375640067	1513.3420481262617	0.8488838853816855	0.7053879590170885	0.5098814289763725	0.8250363654015469	0.7929823572150257	0.8934078554451911	0.8183802830494133	0.8087498014118728	0.9250739046716855	1.0	10.563522389443248	-7.496566161383925	24.24853231107712	0.8570154539733983	0.686063756757556	0.42105058504629067	0.09604554067264345	510.0169285976115	470009.2577473771	0.026953600066141697	0.03980731725331537	3.187379966179e-08	7.496566161383925	-0.17095169721584225	
ASLGS(ph)LEGEAEAEASSPK	ddPTM_K562_Methotrexat_30min_R1	2	ASLGSLEGEAEAEASSPK	18	0	Q09666	Q09666	AHNAK	Neuroblast differentiation-associated protein AHNAK	1	ASLGS(1)LEGEAEAEASSPK;ASLGS(1)LEGEAEAEASSPK	270.32	1.3368999999999996e-116	17194000.0	4478.3	3363.0	6454.0	4886.2	3120.8999999999996	2805.4	2717.8	3785.3	4331.9	5368.4	True	False	4281.439294165015	3918.6785887739074	5099.393599128509	4457.834432314903	3531.3530529139625	3347.503845799602	3327.335833381832	3652.168853471535	4130.510914517354	4396.130739140402	0.9739108202687773	0.8913926407794112	1.1599731449582913	1.0140359094931208	0.8032866314627546	0.7614659445852051	0.7568782711026568	0.8307689352718528	0.9395787249323286	1.0	12.102018576751048	-7.756404267947028	24.997408332060324	0.8312524261742542	1.0120931340399602	0.40388524688441585	0.09449502499506249	117.607546358636	583872.7392469902	0.028836170927905427	0.03606901681926721	1.7522486419083843e-08	7.756404267947028	0.18084070786570594	
ASLLT(ph)DEEDVDMALDQR	ddPTM_K562_Methotrexat_30min_R1	5	ASLLTDEEDVDMALDQR	17	0	P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;H7C3P6	P52948-6	NUP98	Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96	1	ASLLT(1)DEEDVDMALDQR;AS(0.077)LLT(0.923)DEEDVDMALDQR;AS(0.001)LLT(0.999)DEEDVDMALDQR;ASLLT(1)DEEDVDMALDQR;ASLLT(1)DEEDVDMALDQR	160.81	1.5142e-15	47486100.0	5494.88	4895.46	6253.29	6152.07	4043.32	4442.93	5121.73	5494.09	5841.57	5878.46	True	False	5253.331654583535	5704.3515564077	4940.809885264071	5612.727574804866	4575.087451026334	5301.4633427027975	6270.4083294969205	5300.859740620144	5569.996685730773	4813.813930557947	1.0913034301628368	1.1849962708771618	1.0263815669940954	1.1659627180800318	0.9504080375819712	1.1013020900224801	1.3025863525161527	1.1011767004475277	1.1570859958613273	1.0	12.232964662733469	-8.543269125256513	24.999303804511914	1.156258003307527	1.0843102872671362	0.06541691440940889	0.09327509034089486	534.7529899040527	655619.5269452822	0.034415430676204	0.02666083694197646	2.8624036350275155e-09	8.543269125256513	-0.07194771604039074	
ASLPAGLVGT(ph)PPESPSEPREDVLGFLPGPR	ddPTM_K562_Methotrexat_30min_R1	1	ASLPAGLVGTPPESPSEPREDVLGFLPGPR	30	1	K7EKN5;A0A590UJ23;A0A590UJ36;A6NDB9	K7EKN5	PALM3	Paralemmin-3	1	AS(0.001)LPAGLVGT(0.821)PPES(0.143)PS(0.036)EPREDVLGFLPGPR	72.082	0.00017017	28333000.0	603.64	530.78	720.14	621.89	519.96	499.99	624.17	768.67	834.0	842.34	True	False	577.1047083781276	618.4823732826085	568.9924552953829	567.3698692465136	588.3438538220206	596.6059912530625	764.1560111567957	741.6354404136962	795.2275220359356	689.7840635585134	0.8366454646703688	0.8966318677934251	0.8248848956585326	0.8225325855159953	0.8529391803962897	0.8649170411030427	1.1078191734593088	1.075170447672693	1.1528644456258559	1.0	9.430000987621488	-8.74392416901675	7.599798985282559	1.0905090799365622	0.8491418983098512	0.8881815121423176	0.04068850348538257	0.0453381089415512	12.662856330752692	0.01525156610975894	0.011392813453295415	1.8033325883905753e-09	8.74392416901675	-0.241367181626711	
ASLPQAATFGELSGPLKPGS(ph)PYRPPVPR	ddPTM_K562_Methotrexat_30min_R1	2	ASLPQAATFGELSGPLKPGSPYRPPVPR	28	2	Q14687-3;Q14687;Q14687-2;H0Y613	Q14687-3	GSE1	Genetic suppressor element 1	1	ASLPQAATFGELS(0.008)GPLKPGS(0.54)PY(0.453)RPPVPR;ASLPQAATFGELS(0.003)GPLKPGS(0.588)PY(0.409)RPPVPR	74.63	0.00011697	33241000.0	5254.7	3507.0	4782.9	4893.8	2949.1000000000004	2993.7	3396.6	4963.6	5455.0	7759.8	True	False	5023.709679800123	4086.472141192411	3779.0346521958086	4464.768152114664	3336.9583416157407	3572.190155831705	4158.374012681113	4789.0273746047405	5201.398240654716	6354.425026000609	0.790584460316149	0.6430907791769765	0.594709141540424	0.7026234685036059	0.5251393049665074	0.5621578885918486	0.6544060234665068	0.7536523532828415	0.8185474247271758	1.0	12.633545874933198	-9.88202698751012	1.3113505195742217	0.9941224980562876	0.631975246419522	0.7199072133135039	0.07118656238178911	0.22360271195185394	0.8442217195152253	0.06996872904334783	0.02172372169785314	1.3121183600882437e-10	9.88202698751012	-0.36214725163676564	
ASLS(ph)YEEGHPSHSETDLLQR	ddPTM_K562_Methotrexat_30min_R1	2	ASLSYEEGHPSHSETDLLQR	20	0	A0A3B3ISY4;A0A3B3IRW6	A0A3B3ISY4			1	AS(0.206)LS(0.784)Y(0.01)EEGHPSHSETDLLQR;AS(0.201)LS(0.794)Y(0.005)EEGHPSHSETDLLQR	117.35	5.1193e-05	48308000.0	2331.6800000000003	2094.31	2380.1400000000003	2164.31	1649.96	1882.56	1665.5300000000002	2055.05	2002.43	2296.16	True	False	2229.1821390748014	2440.3591303167054	1880.5811405376087	1974.5683026080535	1866.9586603819155	2246.338076548263	2039.0674996587113	1982.7727266865716	1909.33746636741	1880.3031737546785	1.1855439964096135	1.2978540718216631	1.0001478308321818	1.0501329414155813	0.9929029990700298	1.194668023701023	1.084435493233256	1.054496293130898	1.0154412825644252	1.0	10.876749580612383	-6.76159375523457	24.999999482611187	1.0554753634166119	1.2416990604964973	0.6072102019953897	0.06181123497540338	2.6075080264338304	422602.72040544037	0.016237683496754477	0.037655466571168715	1.731435209197735e-07	6.76159375523457	0.1862236970798854	
ASMSEFLES(ph)EDGEVEQQR	ddPTM_K562_Methotrexat_30min_R1	11	ASMSEFLESEDGEVEQQR	18	0	J3QQW9;Q15022	J3QQW9	SUZ12	Polycomb protein SUZ12	1	ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMS(0.001)EFLES(0.999)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR	289.59	5.397499999999998e-177	415465000.0	17553.690000000002	15656.19	19424.78	18609.140000000003	14742.570000000002	14484.249999999998	13990.119999999997	16692.75	16542.32	19784.34	True	False	16782.050805794934	18243.109287771673	15347.784133324978	16977.70558875375	16681.476361721878	17283.126320140753	17127.760537681883	16105.65652095922	15773.27115386752	16201.204311825673	1.0358520565996001	1.1260341476254059	0.9473236580395593	1.0479286145636277	1.0296442190748525	1.0667803446886572	1.0571905771955417	0.9941024266451162	0.9735863365635236	1.0	13.983813438963077	-9.330095587722301	5.705854474560647	0.9866240147866617	1.0441870365051737	0.2683520760146062	0.0417559059949372	0.31144753945388043	19.193355081006928	0.02320691314621706	0.01093953608107419	4.676322046422754e-10	9.330095587722301	0.05756302171851202	
ASNTST(ph)PTKGNTETSASASQTNHVK	ddPTM_K562_Methotrexat_30min_R1	2	ASNTSTPTKGNTETSASASQTNHVK	25	1	A0A2R8Y7W5;A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7Y0;A0A2R8YCQ1;A0A2R8YD28	A0A2R8Y7W5	CDK13	Cyclin-dependent kinase 13	1	AS(0.011)NT(0.061)S(0.148)T(0.47)PT(0.147)KGNT(0.147)ET(0.008)S(0.008)AS(0.001)ASQTNHVK;AS(0.009)NT(0.073)S(0.191)T(0.504)PT(0.126)KGNT(0.077)ET(0.015)S(0.004)ASASQTNHVK	78.531	0.00073136	20568900.0	2818.8999999999996	1764.81	4523.1	2963.8	1631.75	1485.9	1481.92	2627.6	2368.7	3287.8	True	False	2694.9845312555553	2056.4148558590778	3573.7631218187425	2703.9682555963536	1846.3537261983272	1773.0291453887605	1814.2782832457146	2535.1858186621434	2258.579654012615	2692.3475605666144	1.000979431752261	0.763799921666242	1.327378074867359	1.0043161942387904	0.6857783717232092	0.6585439307158472	0.6738648121878785	0.9416265031282233	0.8388885919087239	1.0	11.394648947039574	-7.692020917153289	7.652148045919877	0.7838093318507213	1.0290908264418377	0.30457480704850626	0.16510358682700343	0.2962521202975574	28.026714902201537	0.05031868755109318	0.06487875843747191	2.0322591278150213e-08	7.692020917153289	0.24528149459111637	
ASPDQNASTHT(ph)PQSSVK	ddPTM_K562_Methotrexat_30min_R1	4	ASPDQNASTHTPQSSVK	17	0	Q14677-2;Q14677;Q14677-3;H0YD52	Q14677-2	CLINT1	Clathrin interactor 1	1	ASPDQNASTHT(1)PQSSVK;ASPDQNAS(0.003)T(0.007)HT(0.802)PQS(0.163)S(0.026)VK;ASPDQNAS(0.002)T(0.003)HT(0.995)PQSSVK;ASPDQNAST(0.001)HT(0.999)PQSSVK	131.98	6.3636e-05	59338500.0	8547.4	6888.900000000001	13575.1	8839.9	8685.5	7268.4	6219.9	9764.9	10287.4	11563.8	True	False	8171.666530367778	8027.173633721246	10725.872024717908	8064.919691830152	9827.7954888283	8672.915431956162	7614.870906634656	9421.462932201997	9809.141019415458	9469.483764486953	0.8629474144106641	0.8476886209811407	1.1326775874459747	0.8516746944617737	1.0378385700058022	0.9158804901785532	0.8041484727174272	0.9949288859372624	1.035868613683283	1.0	13.209070062972952	-7.749143650486026	0.011611534881886086	1.8773435869729602	2.7072401744247147e-05	0.07047142544097129	0.09789621325261541	8615.613761123706	28.62468584490353	2210.064153674542	2417.533021826819	1.7817893120283665e-08	7.749143650486026	-1.877316514571216	
ASPEPQRENAS(ph)PAPGTTAEEAMSR	ddPTM_K562_Methotrexat_30min_R1	2	ASPEPQRENASPAPGTTAEEAMSR	24	1	P46379-3;P46379;P46379-2;P46379-5;A0A0G2JK23;A0A024RCR6;A0A0G2JL47;H0Y710	P46379-3	BAG6;BAT3	Large proline-rich protein BAG6	1	ASPEPQRENAS(0.502)PAPGT(0.231)T(0.263)AEEAMS(0.004)R;ASPEPQRENAS(0.527)PAPGT(0.232)T(0.232)AEEAMS(0.008)R	61.738	0.0076289	552188000.0	6151.8	5653.5	6546.599999999999	6603.1	5442.8	5494.7	5675.6	5971.3	6436.9	7256.299999999999	True	False	5881.374237957333	6587.644781930797	5172.558124582379	6024.216474974114	6158.6236010125685	6556.473009736606	6948.4977761210985	5761.2859944349375	6137.64992397256	5942.113755015367	0.9897781295407265	1.1086365986128384	0.8704912658759765	1.0138170899016279	1.0364365030565863	1.1033906922772552	1.1693646507955702	0.9695684451635069	1.0329068370312084	1.0	12.536760508856897	-7.808427633408388	3.5258667553986696	1.06060899328705	0.993863952545534	0.12275410573245849	0.07429058344289124	0.48972136290791174	12.497688823543307	0.024398485075991502	0.029262541330961	1.5544342849431672e-08	7.808427633408388	-0.06674504074151599	
ASPEPQRENASPAPGTT(ph)AEEAMSR	ddPTM_K562_Methotrexat_30min_R1	2	ASPEPQRENASPAPGTTAEEAMSR	24	1	P46379-3;P46379;P46379-2;P46379-5;A0A0G2JK23;A0A024RCR6;A0A0G2JL47;H0Y710	P46379-3	BAG6;BAT3	Large proline-rich protein BAG6	1	ASPEPQRENAS(0.011)PAPGT(0.168)T(0.628)AEEAMS(0.193)R;ASPEPQRENAS(0.004)PAPGT(0.4)T(0.586)AEEAMS(0.01)R	71.735	0.001296	606762000.0	5005.1	4523.4	5774.4	5589.1	4823.1	4580.6	4021.0	5135.2	5477.9	5967.2	True	False	4785.081796937525	5270.814965346382	4562.432351845003	5099.112280637556	5457.4221889548935	5465.736121789999	4922.811607192711	4954.592105340931	5223.233624653059	4886.482256649767	0.9792487817643764	1.078652226389157	0.9336844200418858	1.0435139253188592	1.1168406846311911	1.1185420993500907	1.0074346633497964	1.0139384213661018	1.0689148860706543	1.0	12.254580537735837	-6.237438939455467	22.761028536761902	1.043078690563842	0.9792485272643559	0.10995517960911738	0.053862107393003	4967.59632579935	4710815.100509175	0.014097179476107226	0.7152414469931602	5.788433663266675e-07	6.237438939455467	-0.06383016329948621	
ASPGHS(ph)PHYFAASSPTSPNALPPAR	ddPTM_K562_Methotrexat_30min_R1	2	ASPGHSPHYFAASSPTSPNALPPAR	25	0	Q8TEM1	Q8TEM1	NUP210	Nuclear pore membrane glycoprotein 210	1	AS(0.445)PGHS(0.554)PHY(0.001)FAASSPTSPNALPPAR;ASPGHS(0.941)PHY(0.059)FAASSPTSPNALPPAR	130.52	1.8414e-12	146806000.0	2143.5	1671.49	2293.3	2312.5	1891.22	1679.5	1530.92	1746.3000000000002	2120.91	2096.52	True	False	2049.27430655443	1947.6753120278613	1811.9676697987916	2109.766715387869	2139.948579170094	2004.0396054111452	1874.2677805728586	1684.881639187738	2022.3093570278625	1716.8199123058328	1.1936454673350585	1.1344668698605496	1.0554209307633013	1.228880618325469	1.2464607171849282	1.1672975080534524	1.0917090180155007	0.9813968413989334	1.1779391318404107	1.0	10.74552299887142	-8.85681735875369	4.0457716955889556	1.0561455366515913	1.170313195473101	0.37693743911845845	0.06929140922852071	0.2561637285742666	7.768483077267208	0.031164178483952802	0.020643867903816965	1.3905372945686058e-09	8.85681735875369	0.1141676588215097	
ASPGT(ph)PLSPGSLR	ddPTM_K562_Methotrexat_30min_R1	1	ASPGTPLSPGSLR	13	0	E1P5H9;Q96BD0-2;Q96BD0-3;Q96BD0-4;Q96BD0	E1P5H9	SLCO4A1	Solute carrier organic anion transporter family member 4A1	1	ASPGT(0.852)PLS(0.148)PGSLR	211.77	3.36e-17	22790000.0	1234.6	1295.1	1303.8	1606.3	1115.1	1002.8	904.79	1354.0	921.05	1291.9	True	False	1180.328462268299	1509.093262063957	1030.1501974812131	1465.4781729416381	1261.7551953937514	1196.576907595295	1107.7121895229768	1306.379052545494	878.2305865362099	1057.9243912330464	1.115702097474647	1.426466082613955	0.9737465229254602	1.3852390445725276	1.1926704836846924	1.1310608938703497	1.0470617736981194	1.2348510568159463	0.8301449459092276	1.0	10.047020807869252	-9.199804993341306	0.8191737412797763	0.9583864507029796	1.225265401984989	0.29514495435104704	0.1468951450638709	0.7827339100724067	0.9679243142845186	0.12499600210571665	0.0569471109855861	6.312407202002676e-10	9.199804993341306	0.26687895128200934	
ASPGTPLS(ph)PGSLR	ddPTM_K562_Methotrexat_30min_R1	3	ASPGTPLSPGSLR	13	0	E1P5H9;Q96BD0-2;Q96BD0-3;Q96BD0-4;Q96BD0	E1P5H9	SLCO4A1	Solute carrier organic anion transporter family member 4A1	1	ASPGT(0.014)PLS(0.986)PGSLR;AS(0.002)PGT(0.212)PLS(0.786)PGSLR;ASPGT(0.096)PLS(0.875)PGS(0.028)LR	182.72	0.00015014	114518000.0	3537.5699999999997	3083.8900000000003	4063.2000000000003	4055.5299999999997	2933.01	2622.48	2607.0299999999997	3072.7299999999996	3018.34	3484.6600000000003	True	False	3382.062658566717	3593.450405332725	3210.389846913381	3699.9879815165273	3318.752224591362	3129.2371446255574	3191.7228411588203	2964.660344260057	2878.0180322085703	2853.5543069542127	1.1852105461334697	1.2592892998655605	1.125049500228381	1.2966243440678615	1.16302402814043	1.0966103350475918	1.1185078319275295	1.0389360164041999	1.008573071553164	1.0	11.478544304353509	-8.793238408448753	0.8519130546004428	0.9996246215835644	1.216551345688757	0.7491936427254868	0.047463092516099065	0.30072309645301104	0.42491836347419776	0.03719514060721179	0.021399841516882196	1.6097617046530706e-09	8.793238408448753	0.21692672410519254	
ASPGTPLSPGS(ph)LR	ddPTM_K562_Methotrexat_30min_R1	1	ASPGTPLSPGSLR	13	0	E1P5H9;Q96BD0-2;Q96BD0-3;Q96BD0-4;Q96BD0	E1P5H9	SLCO4A1	Solute carrier organic anion transporter family member 4A1	1	ASPGTPLS(0.008)PGS(0.992)LR	116.19	0.0014344000000000002	16657000.0	853.35	583.49	871.42	749.58	616.25	453.25	655.5	610.88	669.44	738.87	True	False	815.837755772439	679.9018048657998	688.5208506589034	683.8654851980276	697.2976765863147	540.8341477538567	802.5125611824977	589.3950041499196	638.3178805176703	605.053483203313	1.3483729594500942	1.1237052983584526	1.1379503957463266	1.1302562569799004	1.1524562636919904	0.8938617209350449	1.3263497913172637	0.9741205042395702	1.054977614769271	1.0	9.24091886363608	-3.0000000000496128	0.7231688847884021	1.0746657136129345	38.94870269877131	0.34363406024713805	0.11077063549759601	385.3419200476195	1.857275689734893	0.04059632863451481	23685.578117883495	0.0009999999998857624	3.0000000000496128	37.87403698515837	
ASPPSFPSGSPVLRLS(ph)PCLHR	ddPTM_K562_Methotrexat_30min_R1	1	ASPPSFPSGSPVLRLSPCLHR	21	1	Q9C073;D6RFX7;D6RJ87;K7ENS5	Q9C073	FAM117A	Protein FAM117A	1	ASPPS(0.001)FPS(0.152)GS(0.058)PVLRLS(0.789)PCLHR	67.252	0.008101	37882000.0	529.11	580.69	674.53	672.31	496.4	682.64	819.56	580.57	714.03	970.51	True	False	505.85095793842555	676.6391524576624	532.9553709978543	613.3696261286136	561.6853008640111	814.5505187483564	1003.3671924374179	560.1510240297912	680.834901150263	794.7412345658199	0.6364976874702873	0.8513955524496238	0.6706023895803224	0.7717853301819774	0.7067524326592528	1.0249254516073507	1.2625080325492029	0.7048218963192602	0.8566749421554982	1.0	9.634341389318964	-8.257223449603163	24.946730310593317	0.9696325592550102	0.7336046281575277	0.4205564181669007	0.14215913547414066	390.28510187457016	2309419.1819645977	0.04998158943819988	0.04828903955398755	5.53065477325862e-09	8.257223449603163	-0.23602793109748255	
ASPS(ph)PQPSSQPLQIHR	ddPTM_K562_Methotrexat_30min_R1	5	ASPSPQPSSQPLQIHR	16	0	B5MBZ0;Q9HC35	B5MBZ0	EML4	Echinoderm microtubule-associated protein-like 4	1	AS(0.056)PS(0.939)PQPS(0.005)SQPLQIHR;AS(0.047)PS(0.953)PQPSSQPLQIHR;ASPS(0.738)PQPS(0.131)S(0.131)QPLQIHR;ASPS(0.851)PQPS(0.074)S(0.074)QPLQIHR;AS(0.007)PS(0.992)PQPSSQPLQIHR	265.43	3.7875e-110	813894000.0	8463.3	7804.1	10104.6	9351.6	7768.5	7707.4	7728.9	8716.099999999999	8216.9	9455.6	True	False	8091.263465669283	9093.5948779811	7983.782547529271	8531.759747295659	8790.193915717302	9196.745968887086	9462.30256921953	8409.54982266749	7834.898112490509	7743.099213362636	1.0449644570879064	1.1744128064751966	1.0310835916645982	1.101853342208504	1.1352294053713847	1.1877344866014143	1.22203039228659	1.086070266044729	1.0118555757324472	1.0	12.918695412377474	-9.66677177562331	3.773758169463123	1.0038634349147377	1.129172600159997	0.4209075645035968	0.05649236653224005	0.22874051878518553	5.918705942706223	0.04813481699926084	0.015430360501055864	2.1539133318497093e-10	9.66677177562331	0.12530916524525937	
ASPSCS(ph)SPTRDSSGVPVSK	ddPTM_K562_Methotrexat_30min_R1	1	ASPSCSSPTRDSSGVPVSK	19	1	Q8N5I9;A0A087WT30;J3KN91	Q8N5I9	C12orf45	Uncharacterized protein C12orf45	1	ASPS(0.042)CS(0.801)S(0.148)PT(0.004)RDS(0.001)S(0.003)GVPVSK	129.42	1.5853999999999999e-06	183960000.0	3968.5	3293.1	6270.4	4886.0	3122.6	2774.5	3112.5	3907.1	3526.6	5114.5	True	False	3794.0494917477276	3837.2288018707563	4954.328730086055	4457.651966004383	3533.2766327114427	3310.632858120407	3810.5573557292473	3769.685078434637	3362.64913574572	4188.214489481706	0.9058871032694517	0.9161968212247926	1.1829214436195592	1.0643323013182213	0.8436236113467742	0.7904640190789513	0.9098286072260846	0.9000697284969132	0.8028836976211908	1.0	12.032119613031035	-7.765716857724986	24.994165522769226	0.8670485523207605	1.0219379553528949	0.3677544202830749	0.09137266487867451	116.38729855884237	680074.1365311166	0.029335061465344547	0.0344394529192283	1.715075102050613e-08	7.765716857724986	0.1548894030321344	
ASPSCSS(ph)PTRDSSGVPVSK	ddPTM_K562_Methotrexat_30min_R1	2	ASPSCSSPTRDSSGVPVSK	19	1	Q8N5I9;A0A087WT30;J3KN91	Q8N5I9	C12orf45	Uncharacterized protein C12orf45	1	ASPS(0.001)CS(0.054)S(0.945)PTRDSSGVPVSK;ASPSCS(0.004)S(0.986)PT(0.008)RDS(0.002)SGVPVSK	216.35	1.2215e-34	212362000.0	11019.1	8640.1	14550.8	11432.6	7759.1	7427.9	7779.5	9664.9	9135.8	12374.0	True	False	10534.7135578978	10067.729668410777	11496.785928447336	10430.32170825659	8779.557650954766	8863.236549588248	9524.250907275724	9324.979988882527	8711.078652057438	10132.948693488435	1.0396493534668287	0.9935636676893894	1.1345943097328934	1.0293471351492434	0.8664366036508824	0.8746947031601846	0.9399288593453682	0.9202632196168999	0.8596785511857266	1.0	13.306766439813392	-7.674539207863759	5.842319544646247	0.9061861037182224	1.0541778136540745	0.6472029296054478	0.050435435581982095	0.12518312978427706	6.638621256070305	0.0147879937876987	0.019085299846522668	2.1157326694525443e-08	7.674539207863759	0.1479917099358521	
ASPT(ph)GT(ph)PSRASLT(ph)GSPSR	ddPTM_K562_Methotrexat_30min_R1	1	ASPTGTPSRASLTGSPSR	18	1	Q9UF83	Q9UF83		Uncharacterized protein DKFZp434B061	3	AS(0.109)PT(0.897)GT(0.988)PS(0.007)RAS(0.033)LT(0.966)GSPSR	120.03	1.8875e-06	0.0	696.15	695.34	817.07	859.58	615.01	593.63	624.37	554.0	578.32	601.3	True	False	665.5480795464739	810.2331162408709	645.5781729222081	784.2219559840461	695.8945948516825	708.3405959870312	764.4008662479264	534.515505989811	551.4340294290436	492.3987432838689	1.3516445535743051	1.6454816899761457	1.3110881815350834	1.5926562906192077	1.4132745144934253	1.4385507795227481	1.552402146987706	1.0855338549913027	1.1198932510498727	1.0	8.94368326950846	-9.269282902812213	24.74573527913304	1.0770351061573857	1.4737056134947677	0.766934406366171	0.10194312477739641	232.3681632625835	733098.6920455875	0.04990735407106419	0.024682663948776	5.379192635602245e-10	9.269282902812213	0.39667050733738196	
ASPVTTS(ph)PTAATTQNPVLSK	ddPTM_K562_Methotrexat_30min_R1	1	ASPVTTSPTAATTQNPVLSK	20	0	Q96JN0-3;Q96JN0-2;Q96JN0	Q96JN0-3	LCOR	Ligand-dependent corepressor	1	ASPVTT(0.048)S(0.943)PT(0.008)AATTQNPVLSK	130.95	1.7422e-11	0.0	450.7	362.8	834.6	748.81	381.96	317.19	405.55	391.23	571.86	615.5	True	False	430.88776765294216	422.7465334544078	659.4288654838323	683.1629899025256	432.1944349678034	378.48247838068585	496.5049110412841	377.47021914872494	545.274353419029	504.0269856830558	0.8548902735217727	0.838737895911472	1.308320554682556	1.355409550099198	0.8574827285925868	0.7509170920040473	0.9850760478001436	0.7489087486797527	1.081835633622027	1.0	8.977357167684213														
ASQEPS(ph)PKPGTEVIPAAPR	ddPTM_K562_Methotrexat_30min_R1	1	ASQEPSPKPGTEVIPAAPR	19	1	I3L4I0;I3L1Y9;Q96CP2	I3L4I0	FLYWCH2	FLYWCH family member 2	1	AS(0.004)QEPS(0.996)PKPGTEVIPAAPR	72.676	0.010884999999999999	21599000.0	1561.6	1610.8	2725.3	1680.3	1268.0	1458.2	1194.6	1729.6	1818.4	2129.8	True	False	1492.953933807043	1876.9573210814772	2153.2967734280946	1532.9907078340498	1434.7642254141133	1739.976512420681	1462.519459326638	1668.7689876533877	1733.8629808994551	1744.072581816038	0.8560159418666426	1.0761922070508505	1.2346371337286586	0.8789718523284182	0.8226516719391039	0.9976514340985213	0.8385657079728704	0.956823130557881	0.9941461146611501	1.0	10.768244365629641														
ASQGLLSSIENS(ph)ESDSSEAKEEGSR	ddPTM_K562_Methotrexat_30min_R1	1	ASQGLLSSIENSESDSSEAKEEGSR	25	1	Q5UIP0-2;Q5UIP0	Q5UIP0-2	RIF1	Telomere-associated protein RIF1	1	ASQGLLS(0.001)S(0.013)IENS(0.604)ES(0.251)DS(0.078)S(0.026)EAKEEGS(0.026)R	56.461000000000006	0.0068592	24721000.0	384.79	341.2	890.14	585.7	534.87	409.93	425.75	379.49	379.05	349.16	True	False	367.8750923345365	397.5775005916313	703.3117784828396	534.3525903579135	605.214780163444	489.1431708521534	521.2352752455351	366.1431216030205	361.428048234678	285.92374057042355	1.286619612630341	1.3905018862667937	2.459787973813292	1.8688640169993211	2.1166999947469503	1.7107469630758994	1.8229870461461521	1.2805621557431983	1.264071488130443	1.0	8.159486603312304	-9.411554267054813	1.719581144567829	1.0827989389437134	1.8400883411107118	0.4474461302342766	0.3200197493198461	0.3768140426391431	1.9878175837772472	0.2849907731357482	0.09959820619445042	3.876553062045049e-10	9.411554267054813	0.7572894021669985	
ASQS(ph)PLRGASDVGAGEPGPER	ddPTM_K562_Methotrexat_30min_R1	1	ASQSPLRGASDVGAGEPGPER	21	1	A0A1B0GW05	A0A1B0GW05			1	AS(0.316)QS(0.617)PLRGAS(0.067)DVGAGEPGPER	85.271	0.0039094	17267000.0	1121.2	916.0	1076.3	1251.1	1182.5	1033.6	978.77	993.1	1090.6	1315.5	True	False	1071.913390486973	1067.3534306621755	850.3993385097637	1141.4180054580602	1338.0194767761743	1233.3285716897653	1198.284087732407	958.1721101055616	1039.8982440436353	1077.2502025443707	0.9950458936607367	0.9908129310546241	0.7894167357789257	1.0595662945916657	1.2420693666298595	1.1448859037359669	1.112354478933645	0.8894610628454216	0.9653265709187027	1.0	10.073137654365645	-7.4763924407665465	24.779481764857504	1.0686649946764928	0.93046845548801	0.24698484412556065	0.1063026451285058	575.4071358852934	306719.83840863087	0.03313135369169258	0.049139743402418924	3.338931883453453e-08	7.4763924407665465	-0.13819653918848274	
ASQS(ph)PLRGASDVGAGEPGPERAPLSPGR	ddPTM_K562_Methotrexat_30min_R1	1	ASQSPLRGASDVGAGEPGPERAPLSPGR	28	2	A0A1B0GW05	A0A1B0GW05			1	AS(0.183)QS(0.465)PLRGAS(0.35)DVGAGEPGPERAPLS(0.001)PGR	45.942	0.029879000000000003	0.0	493.31	325.03	488.44	597.85	459.98	360.88	480.11	334.39	580.35	776.14	True	False	471.6246830727156	378.7356829346366	385.92311892753776	545.4374187220061	520.4754324968328	430.6149525458614	587.7868890149944	322.6293141659436	553.369655172129	635.5735250496293	0.7420458286645725	0.5958959396634129	0.6072045227141937	0.8581814648107238	0.8189067227999955	0.6775218532147582	0.9248133628113231	0.507619184012976	0.870661903560125	1.0	9.311915219943987	-15.999999999999796	0.18183280332477383	2.098664610495711	0.6755649712687928	0.3025508571652935	0.1269887303034485	174.24021424210702	1.6823450161799298	69.33828738325884	0.385120254518208	1.0000000000004703e-16	15.999999999999796	-1.4230996392269184	
ASQSPLRGAS(ph)DVGAGEPGPER	ddPTM_K562_Methotrexat_30min_R1	2	ASQSPLRGASDVGAGEPGPER	21	1	A0A1B0GW05	A0A1B0GW05			1	ASQS(0.004)PLRGAS(0.996)DVGAGEPGPER;AS(0.011)QS(0.04)PLRGAS(0.949)DVGAGEPGPER	113.86	6.112899999999999e-05	84042000.0	2463.46	1886.65	3118.17	2805.68	2377.56	2287.62	2281.91	2600.45	2721.48	3012.21	True	False	2355.1692480637175	2198.386844933182	2463.708729314308	2559.710390499218	2690.2508137031386	2729.67018882444	2793.686405015946	2508.99069955091	2594.958988813382	2466.6695800883144	0.9547972160825022	0.8912368574531466	0.998799656509365	1.0377192029130924	1.0906409335971214	1.1066217424737972	1.1325742318985113	1.017157190328297	1.0520091583245106	1.0	11.268348758672984	-7.1035420566251535	2.157658908646621	1.0712832169032644	0.922923885460331	0.6404143515628212	0.041340836869857574	0.18917714897204688	1.7159234180027134	0.012395882813079491	0.028086438869302916	7.878761306533093e-08	7.1035420566251535	-0.14835933144293345	
ASREDSGLFS(ph)PIR	ddPTM_K562_Methotrexat_30min_R1	1	ASREDSGLFSPIR	13	1	Q9UKA4	Q9UKA4	AKAP11	A-kinase anchor protein 11	1	ASREDSGLFS(1)PIR	88.95100000000001	0.013447	12237000.0	1851.7	1439.2	1477.2	1713.4	1331.0	1400.7	1625.9	1348.2	1607.2	1445.5	True	False	1770.3014851629748	1677.003337782754	1167.1559071324195	1563.188882225115	1506.0498296736464	1671.3654512053542	1990.5494633510632	1300.7830418329652	1532.4816228011466	1183.7059428186146	1.4955585007434968	1.4167398144420145	0.9860184568755425	1.32058886052636	1.2723175369783761	1.4119769030013785	1.68162496389197	1.0989072494943881	1.294647232362486	1.0	10.209095014676805	-10.126968774503219	1.4448353633418631	1.007113881590292	1.343304351426595	0.23793266548080738	0.18316508713687088	0.9082922494372999	3.9650601559386556	0.18101561387263876	0.05353571592258153	7.46502429530051e-11	10.126968774503219	0.33619046983630296	
ASRVPS(ph)S(ph)DEEVVEEPQSR	ddPTM_K562_Methotrexat_30min_R1	1	ASRVPSSDEEVVEEPQSR	18	1	Q9C0C2	Q9C0C2	TNKS1BP1	182 kDa tankyrase-1-binding protein	2	AS(0.006)RVPS(0.995)S(0.999)DEEVVEEPQSR	80.016	0.022822	50083000.0	2848.7	2582.8	3412.9	3158.7	2362.1	2202.5	2512.5	2662.4	2659.7	3705.6	True	False	2723.4745589370687	3009.563799906405	2696.5789300380657	2881.7816751981254	2672.757552721353	2628.101953508812	3075.9920823356592	2568.761882937313	2536.0511275287513	3034.4799320018374	0.8975094974974511	0.9917889942745494	0.888646156990447	0.9496789366792822	0.880795923062224	0.8660798596137234	1.013680153193973	0.8465245908687584	0.8357449000678432	1.0	11.56723356430163	-6.796373831889092	24.979026837122166	0.907150395664299	0.9446496151193877	0.04634945959148373	0.06141711954551461	487.55566166331926	348613.4779975682	0.015728140456872656	0.032743078539295034	1.5981817538981783e-07	6.796373831889092	0.03749921945508872	
ASS(ph)ADDIEAMR	ddPTM_K562_Methotrexat_30min_R1	1	ASSADDIEAMR	11	0	Q12809-7;Q12809-4;Q12809;Q86U57;Q12809-5	Q12809-7	KCNH2	Potassium voltage-gated channel subfamily H member 2	1	AS(0.11)S(0.89)ADDIEAMR	89.9	0.013965	8560300.0	1865.1	1544.3	2375.8	2498.4	1619.7	1673.0	1737.2	1712.6	1952.5	2190.8	True	False	1783.1124372076827	1799.4693263882077	1877.152047227999	2279.3691510162403	1832.7189399867812	1996.2835724041972	2126.8113215655744	1652.3668872890796	1861.7287011692622	1794.0248907139528	0.9939173343899775	1.0030347603884628	1.046335564765194	1.2705337383079112	1.0215682900906853	1.112740175867768	1.1854971090836903	0.9210389977540954	1.0377385011800844	1.0	10.80898419134093	-9.272057276756653	24.98234364591809	0.9845415694526163	1.0905805189461875	0.2388537564466925	0.08527201720040029	1124.8149143737182	2646507.1277193404	0.047512075630560056	0.02320779729355561	5.344938632358082e-10	9.272057276756653	0.10603894949357118	
ASS(ph)ASVPAVGASAEGTR	ddPTM_K562_Methotrexat_30min_R1	2	ASSASVPAVGASAEGTR	17	0	A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23	A0A2R8YFI4	PANK2	Pantothenate kinase 2, mitochondrial	1	AS(0.133)S(0.813)AS(0.054)VPAVGASAEGTR;AS(0.059)S(0.881)AS(0.059)VPAVGASAEGTR	123.42	0.0001851	20246200.0	1960.11	1424.4299999999998	2192.3	1775.6299999999999	1461.0	1198.3	1402.92	1949.8400000000001	1996.25	2414.3	True	False	1873.9459113694447	1659.7928463298283	1732.1661895521281	1619.9632747434227	1653.147108304431	1429.854515727404	1717.560522248893	1881.2630220201668	1903.4447732185095	1977.046874954674	0.9478510272612566	0.8395313572764332	0.876138149021803	0.8193853647403085	0.8361699104085892	0.7232274225972437	0.8687505309090205	0.9515520576937746	0.9627716961754628	1.0	10.949131361830851	-9.25265117321875	3.4554263619154373	0.972736845277825	0.8380343229845097	0.5506939342900338	0.05314544644651944	0.19233389575482224	4.907510662113702	0.03156127764660642	0.015249005787206582	5.589189400589356e-10	9.25265117321875	-0.13470252229331525	
ASS(ph)CETYEYPQR	ddPTM_K562_Methotrexat_30min_R1	2	ASSCETYEYPQR	12	0	Q9UQC2;Q9UQC2-2	Q9UQC2	GAB2	GRB2-associated-binding protein 2	1	AS(0.288)S(0.712)CETYEYPQR;AS(0.005)S(0.995)CETYEYPQR	155.47	2.0413000000000002e-07	68204000.0	2555.6	2132.5299999999997	3202.2	2681.9	1952.4	2018.25	1810.38	1887.29	2329.3999999999996	2394.3	True	False	2443.2588839890363	2484.894335687783	2530.1019806522017	2446.781990918371	2209.174821528797	2408.24824865796	2216.4037994104788	1820.9129409738455	2221.106702434664	1960.669068758635	1.2461352723516699	1.2673706008230408	1.2904278549434627	1.2479321624977284	1.1267453833642103	1.2282787988197839	1.1304323787867772	0.928720185363421	1.132831000307931	1.0	10.937130335668822	-8.690729613632353	0.8265249830064112	1.0083451096214935	1.2658517805321248	0.6851622522900187	0.06401548216345077	0.35309650336390286	0.4814100764708514	0.049704155642764127	0.03141191475711109	2.0383107097600103e-09	8.690729613632353	0.2575066709106313	
ASS(ph)FADMMGILK	ddPTM_K562_Methotrexat_30min_R1	1	ASSFADMMGILK	12	0	Q9H019-3;Q9H019;E9PPF9;E9PLD2	Q9H019-3	MTFR1L	Mitochondrial fission regulator 1-like	1	AS(0.03)S(0.97)FADMMGILK	77.67399999999999	0.023371	41921000.0	7396.1	4948.2	7736.3	7987.7	4407.4	4218.0	4445.7	5435.6	6810.7	8180.7	True	False	7070.976299840085	5765.805944980979	6112.55635279484	7287.430742704297	4987.050352594767	5033.0688035869125	5442.761393209804	5244.4268670725905	6494.07204356133	6699.095957396223	1.0555120190558374	0.8606841850974185	0.9124449614796447	1.0878230120974033	0.7444363216037755	0.7513056740186097	0.8124620736624399	0.7828559107714249	0.9693952862985141	1.0	12.709750701757569	-6.259496853051539	23.68616764618289	0.8704859406392494	1.0555121412782527	0.18683291406439761	0.10806813706230885	143.32073088782204	1747283.1222031177	0.02795898612824269	0.17662332035951017	5.501779071495451e-07	6.259496853051539	0.1850262006390032	
ASS(ph)FSGISILTR	ddPTM_K562_Methotrexat_30min_R1	2	ASSFSGISILTR	12	0	H0YIX9;H7C0E9;A0A0U1RRA6;B5MCU0;B5MCG9;Q9Y2K5-3;Q9Y2K5-2;Q9Y2K5	H0YIX9	R3HDM2	R3H domain-containing protein 2	1	AS(0.033)S(0.967)FSGISILTR;AS(0.151)S(0.849)FSGISILTR	182.25	5.946399999999999e-09	14165300.0	3141.6000000000004	2382.31	3145.5299999999997	3682.2	2503.0299999999997	2833.8	2578.1	2866.3999999999996	3346.3	3765.4	True	False	3003.499025645627	2775.946235153721	2485.32623921083	3359.3872429843086	2832.222317932402	3381.3917438607346	3156.3045522266925	2765.5870873090144	3190.7312433919105	3083.4495725279917	0.9740710704028747	0.9002729475085394	0.8060213668982479	1.089489924827954	0.9185239619827416	1.096626250673032	1.023627751317162	0.8969133505373414	1.0347927437567799	1.0	11.590329536991092	-7.262520493527634	24.998967916131136	1.0048172174554466	0.8941369137773041	0.35601235999841396	0.07082032998414892	109.3507903181578	2528584.0139521933	0.019446305999304116	0.03078040319802747	5.46360767551804e-08	7.262520493527634	-0.11068030367814252	
ASS(ph)FSGISVLTR	ddPTM_K562_Methotrexat_30min_R1	1	ASSFSGISVLTR	12	0	H7C1X4;H7BZ47;H7C207;Q15032-2;Q15032-4;Q15032;Q15032-3	H7C1X4	R3HDM1	R3H domain-containing protein 1	1	AS(0.013)S(0.987)FSGISVLTR	132.86	9.8025e-05	20405000.0	1729.9	1298.2	1621.3	1491.0	1136.3	1197.9	984.98	1577.2	1643.2	2408.6	True	False	1653.8556673237747	1512.7054843729663	1281.011286375433	1360.2863449268393	1285.7433669858492	1429.3772213885154	1205.8868383120302	1521.7289820345302	1566.8079906588134	1972.379200188802	0.8385079639683194	0.7669445531711984	0.6494751548043148	0.6896677600314527	0.6518743286599118	0.7246969655995618	0.6113869169765119	0.7715194836210327	0.7943746265975802	1.0	10.945721228690267	-10.150078383428747	1.577306110106564	0.9987042054161689	0.7040948256828372	0.6585485052758715	0.06301121155748976	0.37435539231888987	1.8782102817022654	0.06237870014229485	0.01807394581394389	7.078180226627538e-11	10.150078383428747	-0.2946093797333317	
ASS(ph)HS(ph)SQTQGGGSVTK	ddPTM_K562_Methotrexat_30min_R1	1	ASSHSSQTQGGGSVTK	16	0	P02545-3;P02545;P02545-5;P02545-4;P02545-6;A0A0C4DGC5;Q3BDU5;P02545-2;Q5TCI8	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	2	AS(0.013)S(0.987)HS(0.917)S(0.083)QTQGGGSVTK	140.49	3.3381e-06	10369000.0	8856.5	5987.0	11236.0	8905.9	6656.4	6143.0	5104.0	7691.8	7708.8	10317.0	True	False	8467.178864473672	6976.249988400049	8877.717149025082	8125.1335743017635	7531.833272907338	7330.047809491322	6248.70192566814	7421.275034246258	7350.4195705882785	8448.49132622597	1.0022119379101084	0.825739143123014	1.0508050261549895	0.9617259769302913	0.8915003853441709	0.8676161845295676	0.7396234054559301	0.8784142336998076	0.8700274743457407	1.0	13.044478022447702	-7.929447994237025	3.2250634165793963	0.8565873627988757	0.9568244809288762	0.20951461468607901	0.07949879606539806	0.355192130795707	7.480791584852207	0.02581827338020959	0.029262292823123898	1.1763918464621506e-08	7.929447994237025	0.10023711813000047	
ASS(ph)HSS(ph)QTQGGGSVTK	ddPTM_K562_Methotrexat_30min_R1	1	ASSHSSQTQGGGSVTK	16	0	P02545-3;P02545;P02545-5;P02545-4;P02545-6;A0A0C4DGC5;Q3BDU5;P02545-2;Q5TCI8	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	2	AS(0.015)S(0.985)HS(0.2)S(0.788)QT(0.012)QGGGSVTK	131.48	1.071e-08	0.0	2015.8	1620.6	2521.8	2161.9	1422.9	1101.0	1339.5	1841.0	1883.9	2633.4	True	False	1927.187845650767	1888.376604509959	1992.5086424360502	1972.3695835662875	1610.036290490332	1313.7526677926005	1639.91697285119	1776.2509865112656	1796.3179001960439	2156.465741832266	0.8936788599355674	0.8756812444910338	0.9239695320840536	0.9146306130930886	0.74660879570586	0.6092156449823105	0.7604651170845013	0.8236861602086262	0.8329916239104183	1.0	11.074453081893193	-7.756988792238135	24.989644077677326	0.7756134428064053	0.9016808437902163	0.22392250179972684	0.09279872907239134	147.26125390253503	826853.059888296	0.028136786467947737	0.03507447884979267	1.7498918471953163e-08	7.756988792238135	0.12606740098381097	
ASS(ph)HSSQT(ph)QGGGSVTK	ddPTM_K562_Methotrexat_30min_R1	1	ASSHSSQTQGGGSVTK	16	0	P02545-3;P02545;P02545-5;P02545-4;P02545-6;A0A0C4DGC5;Q3BDU5;P02545-2;Q5TCI8	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	2	AS(0.003)S(0.997)HS(0.017)S(0.256)QT(0.723)QGGGS(0.004)VT(0.001)K	162.26	3.7214e-07	10768000.0	6213.4	4335.7	7496.8	5921.4	3929.1	3926.3	3528.0	5033.7	5478.0	6698.8	True	False	5940.26637571509	5052.100730700871	5923.324129833686	5402.280055566584	4445.845518986271	4685.001906951942	4319.243807554313	4856.661917871679	5223.328975674888	5485.582407300819	1.0828870910423527	0.9209780029877918	1.07979858655487	0.9848143103960363	0.8104600731308399	0.8540573377799637	0.7873810813243434	0.8853502795633691	0.9521922355451456	1.0	12.421429085148153	-7.622182187589352	5.884410022305606	0.8703020286426935	1.0194859515917694	0.46068721027976245	0.07208445312947526	0.17648012368869587	8.797656406707201	0.0209478910671994	0.027158581550322	2.386809800360763e-08	7.622182187589352	0.1491839229490759	
ASS(ph)HSSQTQGGGSVTK	ddPTM_K562_Methotrexat_30min_R1	4	ASSHSSQTQGGGSVTK	16	0	P02545-3;P02545;P02545-5;P02545-4;P02545-6;A0A0C4DGC5;Q3BDU5;P02545-2;Q5TCI8	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	1	AS(0.07)S(0.921)HS(0.008)S(0.001)QTQGGGSVTK;AS(0.047)S(0.727)HS(0.224)S(0.001)QTQGGGSVTK;AS(0.074)S(0.516)HS(0.356)S(0.054)QTQGGGSVTK;AS(0.001)S(0.525)HS(0.363)S(0.111)QTQGGGSVTK	156.08	1.1342e-10	36441700.0	11117.199999999999	8920.6	16854.2	12669.6	9293.6	9077.4	7863.13	10779.699999999999	10754.3	13327.1	True	False	10628.501199359416	10394.577525725988	13316.73374627079	11558.875838822987	10515.871297561984	10831.4790795827	9626.637063632232	10400.571841007872	10254.334940325016	10913.433047760602	0.9738916391245326	0.9524571672576412	1.2202149120256285	1.059142048907775	0.9635713392423114	0.992490541901962	0.8820906328469742	0.9530064275367532	0.939606711788017	1.0	13.41381738239227	-7.800825172175717	5.000851582534529	0.9498030091038316	1.0567195739493846	0.292165822587786	0.07318717974999758	0.24983482891207173	14.47231487838681	0.024100832298061144	0.02831547822134708	1.5818847082032555e-08	7.800825172175717	0.10691656484555301	
ASS(ph)LDDLR	ddPTM_K562_Methotrexat_30min_R1	1	ASSLDDLR	8	0	Q96P11-5;Q96P11;Q96P11-2;Q96P11-4;Q96P11-3	Q96P11-5	NSUN5	Probable 28S rRNA (cytosine-C(5))-methyltransferase	1	AS(0.126)S(0.874)LDDLR	131.62	0.0002497	13762000.0	7196.2	5792.0	9126.1	8081.6	6933.8	5854.0	6004.5	7064.4	6621.3	7808.6	True	False	6879.863664486582	6749.029552833323	7210.656325535586	7373.098675493455	7845.71623515487	6985.202649643856	7351.161973486356	6815.941047859961	6313.477208221279	6394.38687311894	1.0759223364179786	1.0554615613273648	1.127654061071613	1.1530579587683185	1.2269692764660685	1.0923960010941187	1.1496273402520512	1.0659256599742462	0.9873467673284216	1.0	12.642590317339407	-9.558402851592238	3.141672088924162	0.9938416477077067	1.1266723398702974	0.5769340774723248	0.045160138586267114	0.1995615199061428	3.904698552041735	0.03881085793677495	0.013189709531500138	2.76437622017311e-10	9.558402851592238	0.1328306921625907	
ASS(ph)LEDLVLK	ddPTM_K562_Methotrexat_30min_R1	3	ASSLEDLVLK	10	0	Q15477	Q15477	SKIV2L	Helicase SKI2W	1	AS(0.001)S(0.999)LEDLVLK;AS(0.004)S(0.996)LEDLVLK;AS(0.001)S(0.999)LEDLVLK	181.68	0.00015473	30246300.0	14790.500000000002	10753.2	20014.7	14445.7	9551.0	10006.9	8883.2	13786.5	13930.599999999999	18818.0	True	False	14140.327329644644	12529.983526852078	15813.88798705877	13179.267909396134	10807.123909250948	11940.591799576534	10875.483727683237	13301.62098073742	13282.969446611287	15409.877849851737	0.9176144981435198	0.8131137474897397	1.0262176080267191	0.8552480452999136	0.7013114584392975	0.7748660901741942	0.7057475622876448	0.8631879571235795	0.8619775948930761	1.0	13.91156780557401	-7.521562267574607	24.999699977762845	0.8009833181151828	0.9137847521184238	0.17240196464842317	0.0946964952847623	72.72248955004416	1381004.360418856	0.027266515386842025	0.03569254765869977	3.009107702946164e-08	7.521562267574607	0.11280143400324105	
ASS(ph)LGEIDESSELR	ddPTM_K562_Methotrexat_30min_R1	3	ASSLGEIDESSELR	14	0	Q16513-4;Q16513-3;Q16513-2;Q16513;Q16513-5	Q16513-4	PKN2	Serine/threonine-protein kinase N2	1	AS(0.064)S(0.936)LGEIDESSELR;AS(0.002)S(0.998)LGEIDESSELR;AS(0.01)S(0.99)LGEIDESSELR	273.07	2.1768999999999993e-124	147290000.0	4427.599999999999	4042.1	5886.700000000001	5267.0	4040.75	3993.6800000000003	3719.3599999999997	4639.4	4560.0	5650.2	True	False	4232.968005458547	4709.98832104758	4651.162116515305	4805.250287545046	4572.179450979556	4765.402138337831	4553.521158748639	4476.229672363045	4348.0065953044	4626.894028442572	0.9148616716608439	1.0179589789811931	1.0052450062446971	1.0385477294284413	0.9881746637967777	1.0299354402853877	0.9841420898678698	0.9674372580929327	0.9397246983778348	1.0	12.175828341336821	-11.215434561916965	5.954118387300258	0.9999999882907772	0.9908683471086436	0.002328703692993428	0.037059889236028216	56424701.06812953	164497494.35015216	0.03629349809193221	0.00937094540695687	6.08927290037153e-12	11.215434561916965	-0.00913164118213361	
ASS(ph)LNENVDHSALLK	ddPTM_K562_Methotrexat_30min_R1	1	ASSLNENVDHSALLK	15	0	Q96SB3	Q96SB3	PPP1R9B	Neurabin-2	1	AS(0.032)S(0.968)LNENVDHSALLK	220.34	2.7210999999999997e-27	11361000.0	1331.6	1068.5	2232.1	1708.1	1160.3	1012.6	1169.5	1476.8	1501.1	1591.7	True	False	1273.0644584128202	1245.0514636053874	1763.6127134513076	1558.3535249963343	1312.8997876561484	1208.2706188980808	1431.7901453896734	1424.8601069417919	1431.3141886428577	1303.4277061116488	0.9767050772693735	0.9552132870641458	1.3530575613683022	1.1955810956674946	1.007267055549062	0.9269947333731011	1.0984806742070505	1.0931638941390904	1.0981155164429615	1.0	10.348094851481415	-7.778225870727017	24.973119237272012	1.0395352428347182	1.124995871657635	0.10946513651347434	0.11526603884426881	606.0880791954697	901668.0946671799	0.039156225006522966	0.044519534752537365	1.6663803251164545e-08	7.778225870727017	0.08546062882291672	
ASS(ph)LNFLNK	ddPTM_K562_Methotrexat_30min_R1	2	ASSLNFLNK	9	0	Q9H0B6;Q9H0B6-2;A8MZ87	Q9H0B6	KLC2	Kinesin light chain 2	1	AS(0.008)S(0.992)LNFLNK;AS(0.001)S(0.999)LNFLNK	193.3	4.5054e-09	274380000.0	10338.6	6791.0	14988.8	12213.4	8221.099999999999	7311.9	7179.700000000001	8787.7	9456.2	11760.7	True	False	9884.127523090097	7913.097322736719	11842.855714071482	11142.670184526802	9302.318748858019	8724.821191310371	8789.930488973265	8478.631610084221	9016.58332599067	9630.723266486943	1.0263120691552785	0.8216514070415428	1.2296953599821867	1.156992042674629	0.9659003266378021	0.905936236551523	0.9126968188942284	0.8803732986065774	0.9362311714808211	1.0	13.233428433072604	-7.987788890687276	24.003924105537408	0.9205899470007755	1.0548870389597034	0.2693498998639967	0.10229554521521182	201.2407182861432	395583.66668739513	0.033695143558541335	0.038175359817575416	1.0285161354006946e-08	7.987788890687276	0.13429709195892792	
ASS(ph)LNVLNVGGK	ddPTM_K562_Methotrexat_30min_R1	2	ASSLNVLNVGGK	12	0	Q07866-4;Q07866-6;Q07866-7;H0YG16;H0YJK1;Q07866-9;G3V5R9	Q07866-4	KLC1	Kinesin light chain 1	1	AS(0.043)S(0.957)LNVLNVGGK;AS(0.086)S(0.914)LNVLNVGGK	195.94	6.2422e-07	375090000.0	9043.400000000001	6597.4	12678.5	9832.1	6055.6	5849.0	6346.5	7843.5	8020.099999999999	10117.3	True	False	8645.862964261416	7687.508213374061	10017.456111953947	8970.135058320038	6852.017542127524	6979.23647040774	7769.864179320699	7567.6396592618785	7647.247301535262	8284.958931358538	1.0435613544850364	0.9278873048213759	1.2091135508273811	1.0827012098235165	0.8270430304962242	0.8423984389338801	0.9378277241558546	0.9134190913872114	0.9230277862441127	1.0	13.016278830669801	-7.748750858692019	24.996942294639297	0.9012396729241757	1.0661994080447834	0.4961767060183735	0.07811676295493622	196.22407537268907	386568.3280979337	0.02386807054881192	0.03060661885483978	1.7834015563465184e-08	7.748750858692019	0.1649597351206077	
ASS(ph)LPGSLQR	ddPTM_K562_Methotrexat_30min_R1	2	ASSLPGSLQR	10	0	E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2	E3W994	CLASP2	CLIP-associating protein 2	1	AS(0.127)S(0.873)LPGSLQR;AS(0.004)S(0.973)LPGS(0.023)LQR	172.21	9.144e-05	114369000.0	6587.8	5912.7	7910.700000000001	7181.6	5456.2	5986.4	5508.5	5599.0	6685.0	7075.1	True	False	6298.208200008996	6889.673176284108	6250.352176111848	6552.000278153309	6173.7859358868145	7143.187075816184	6743.921347480989	5402.079996456587	6374.2158091249785	5793.730830879264	1.0870729731593642	1.1891600382198844	1.0788130064308297	1.1308775760228007	1.0655976461629773	1.232916627356008	1.1640032207808872	0.9324009268198536	1.1001919134993055	1.0	12.500276945111596	-9.245886492187312	24.991876094485573	1.0122223098332679	1.1362572403117424	0.46239147100784483	0.06157250217756129	677.0727406788686	1087988.1125779855	0.028266464867777025	0.016243994055672673	5.676929590458354e-10	9.245886492187312	0.12403493047847447	
ASSAS(ph)VPAVGASAEGTRR	ddPTM_K562_Methotrexat_30min_R1	1	ASSASVPAVGASAEGTRR	18	1	A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23	A0A2R8YFI4	PANK2	Pantothenate kinase 2, mitochondrial	1	AS(0.02)S(0.155)AS(0.771)VPAVGAS(0.045)AEGT(0.008)RR	115.31	0.00041395	9816100.0	1357.4	1138.9	1750.2	1520.7	1148.9	1279.3	1170.3	1286.8	1304.7	1533.3	True	False	1297.7303213048672	1327.0838670099913	1382.8569378981583	1387.3825920390639	1300.0004878377567	1526.506619352473	1432.7695657541974	1241.5425146348164	1244.0447817749225	1255.6045120192184	1.03355022133355	1.05692823998842	1.1013475379076945	1.1049519006649033	1.0353582480737842	1.2157543276884213	1.1410994083240975	0.9888006157593461	0.9907934941825703	1.0	10.294166403033758	-9.27470322175365	24.521907606687563	0.9923477702735138	1.099281149630028	0.4756622179999891	0.05062135274924566	587.2649820204588	1085715.551466929	0.029363270637621394	0.014251176663068651	5.31247351903912e-10	9.27470322175365	0.10693337935651426	
ASSGDIS(ph)PYDNNSPVLSER	ddPTM_K562_Methotrexat_30min_R1	1	ASSGDISPYDNNSPVLSER	19	0	O43182-4;O43182;H7BYE6;B4DN07;O43182-5;O43182-2	O43182-4	ARHGAP6	Rho GTPase-activating protein 6	1	ASSGDIS(1)PYDNNSPVLSER	316.25	3.777299999999998e-254	24208000.0	696.77	473.11	904.9	775.96	564.79	555.52	738.08	629.87	537.02	675.72	True	False	666.1408250888406	551.2833860050023	714.9738561901748	707.9327915556199	639.069784599083	662.8663778493601	903.6132283105687	607.7171150862857	512.0540574145543	553.340560139325	1.2038532380874334	0.9962822639753631	1.2921045513275808	1.279379901913155	1.1549303098948185	1.1979356396401841	1.6330146268024324	1.0982695989848807	0.9253868129341988	1.0	9.112023867698218	-9.518970915499011	24.81643842496718	0.9790715207513144	1.2473006531999724	0.37024860141529503	0.15198647325647374	178.65770485417963	1134601.7843109071	0.10175290421087545	0.04038433889803573	3.027116145884287e-10	9.518970915499011	0.268229132448658	
ASSGDQGS(ph)PPCFLR	ddPTM_K562_Methotrexat_30min_R1	2	ASSGDQGSPPCFLR	14	0	A6NN50;O75147-2;O75147-1;O75147-4;O75147	A6NN50	OBSL1	Obscurin-like protein 1	1	ASS(0.002)GDQGS(0.998)PPCFLR;AS(0.012)S(0.073)GDQGS(0.915)PPCFLR	116.0	0.0014203	30485000.0	2046.0100000000002	1886.82	2236.0	2276.6000000000004	1923.0700000000002	1745.9899999999998	1745.98	1913.38	2042.3899999999999	2543.2	True	False	1956.0698502232012	2198.584934543674	1766.6941567479619	2077.0140126495257	2175.987412434635	2083.377856893009	2137.5604600662336	1846.085340885891	1947.4397346894195	2082.6018358881342	0.9392433140677738	1.055691441665362	0.8483110531757252	0.9973169027596552	1.0448408211964704	1.0003726209165391	1.0263894054211578	0.8864322066145784	0.9350994036067992	1.0	11.024171327450368	-9.25627231024292	24.938470723741993	0.933074354747545	0.9878088262425566	0.10486947884296138	0.06170436353648815	837.2618291907669	4041001.740431419	0.029942865015180915	0.016625468801542156	5.542780619296289e-10	9.25627231024292	0.05473447149501165	
ASSHS(ph)SQTQGGGSVTK	ddPTM_K562_Methotrexat_30min_R1	1	ASSHSSQTQGGGSVTK	16	0	P02545-3;P02545;P02545-5;P02545-4;P02545-6;A0A0C4DGC5;Q3BDU5;P02545-2;Q5TCI8	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	1	AS(0.001)S(0.31)HS(0.606)S(0.072)QT(0.011)QGGGSVTK	176.42	3.6095999999999997e-07	71089000.0	7282.6	5190.9	10094.0	7763.7	5443.7	5006.2	4870.0	7000.6	6342.3	7545.8	True	False	6962.465623939023	6048.607994786342	7975.407342671697	7083.068474921867	6159.6419667877	5973.577298368133	5962.2214690446435	6754.384930022148	6047.447857324363	6179.182499703009	1.1267616103382059	0.9788686440442659	1.2906897219907358	1.1462792165892983	0.9968376831536779	0.9667261484274403	0.9648883924906259	1.0930871406285192	0.9786808947000712	1.0	12.59320026815776	-7.763080671183949	24.943319582006396	1.0012681071117788	1.1355254398844663	0.4226206587986202	0.07764569745622132	44.19004029603559	671576.1700617357	0.024323077808515524	0.02905622214702221	1.7255173434639462e-08	7.763080671183949	0.13425733277268748	
ASSHSS(ph)QTQGGGSVTK	ddPTM_K562_Methotrexat_30min_R1	2	ASSHSSQTQGGGSVTK	16	0	P02545-3;P02545;P02545-5;P02545-4;P02545-6;A0A0C4DGC5;Q3BDU5;P02545-2;Q5TCI8	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	1	ASS(0.006)HS(0.011)S(0.669)QT(0.315)QGGGSVTK;ASS(0.067)HS(0.067)S(0.866)QTQGGGSVTK	327.7	0.0	69950000.0	7105.3	5677.1	9816.5	7270.900000000001	5035.0	4520.1	4804.8	6022.700000000001	5949.9	7662.5	True	False	6792.959519645993	6615.144280799385	7756.150800409825	6633.471485800507	5697.190753123077	5393.545353032997	5882.398709335869	5810.878227301143	5673.290447675799	6274.74699885689	1.0825869984691827	1.0542487660465845	1.2360898059830638	1.057169553929261	0.9079554528909245	0.8595637965985836	0.9374718551054732	0.9260737091646479	0.9041464857004335	1.0	12.615341574665262	-7.648877617762343	4.151135767593342	0.9164980155401491	1.1212553783516237	0.7340487316548281	0.055400989183850204	0.10865549688466707	3.375099655310267	0.01672995467959168	0.021824541145679416	2.2445143287477486e-08	7.648877617762343	0.2047573628114746	
ASSHSSQTQGGGS(ph)VTK	ddPTM_K562_Methotrexat_30min_R1	4	ASSHSSQTQGGGSVTK	16	0	P02545-3;P02545;P02545-5;P02545-4;P02545-6;A0A0C4DGC5;Q3BDU5;P02545-2;Q5TCI8	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	1	ASSHSSQT(0.088)QGGGS(0.911)VTK;ASSHSSQTQGGGS(0.994)VT(0.005)K;ASSHSSQT(0.007)QGGGS(0.508)VT(0.485)K;ASSHSSQT(0.011)QGGGS(0.821)VT(0.167)K	243.61	1.4304999999999999e-64	15014900.0	7815.78	5327.93	9351.0	8282.460000000001	5594.04	5196.77	5159.73	6507.82	7291.23	8959.2	True	False	7472.207669550727	6208.279873174592	7388.352888975933	7556.349591148722	6329.7543119365655	6200.972253773432	6316.930796811847	6278.936281932511	6952.262308745893	7336.60206357698	1.018483434810642	0.8462064344468109	1.0070537866099993	1.0299522211600778	0.8627637504507744	0.8452103848672053	0.8610158683912605	0.8558371065407353	0.9476133840297587	1.0	12.840896320336618	-7.779471564669631	24.999588806885953	0.8839692308608488	0.9684534326716487	0.24852604514462728	0.06595706514123886	322.4541119894483	447044.0242931508	0.02027679882437105	0.023036275337741018	1.6616074675682737e-08	7.779471564669631	0.08448420181079996	
ASSPAES(ph)SPEDSGYMR	ddPTM_K562_Methotrexat_30min_R1	1	ASSPAESSPEDSGYMR	16	0	Q9Y4H2	Q9Y4H2	IRS2	Insulin receptor substrate 2	1	ASS(0.002)PAES(0.579)S(0.417)PEDSGYMR	118.51	0.0004428999999999999	12120000.0	2421.6	2010.1	2924.7	2316.9	1966.1	1735.8	1879.0	2325.9	2084.9	2459.3	True	False	2315.149363541967	2342.234859141966	2310.845438390324	2113.7809742193112	2224.6766116614263	2071.218783609804	2300.4135811775923	2244.0967786673305	1987.9734540680136	2013.8969388957591	1.149586812923698	1.1630361087028802	1.1474497000116524	1.049597391700848	1.104662591563022	1.0284631470493595	1.142269764032182	1.1143056704271035	0.987127700366852	1.0	10.97577414002842	-3.0000000008562995	0.10121030063072538	0.9499406691010935	1.572266860067287	0.5042041660393315	0.04442529833423861	114.59663765863392	0.8222694073717915	0.566527173162405	9.909194764661628	0.0009999999980282975	3.0000000008562995	0.6223261909661936	
ASSPAESS(ph)PEDSGYMR	ddPTM_K562_Methotrexat_30min_R1	1	ASSPAESSPEDSGYMR	16	0	Q9Y4H2	Q9Y4H2	IRS2	Insulin receptor substrate 2	1	ASS(0.012)PAES(0.419)S(0.552)PEDS(0.01)GY(0.007)MR	81.703	0.016845	8902100.0	1662.8	1418.1	1944.5	1767.4	1352.0	1491.1	1603.5	1684.6	1829.2	1917.1	True	False	1589.7053029805024	1652.4169214214326	1536.3760231647632	1612.4547860655239	1529.8116977601576	1779.23397179432	1963.1256931443709	1625.351663159631	1744.160891256755	1569.8946129211788	1.0126191209882942	1.0525655084239702	0.9786491465856769	1.0271102103249792	0.9744677669245345	1.1333461221856245	1.2504824699611448	1.0353253331669574	1.1110050807877545	1.0	10.616451998862335	-8.268151582647628	24.932128052270713	1.117267805240117	1.0108088954041337	0.3476644931436793	0.06548109839207127	549.4772005682765	2040997.617185806	0.022711184959484914	0.020485694184660237	5.393223489319785e-09	8.268151582647628	-0.10645890983598338	
ASSPS(ph)PLTIGTPESQR	ddPTM_K562_Methotrexat_30min_R1	2	ASSPSPLTIGTPESQR	16	0	Q9NPI6-2;Q9NPI6	Q9NPI6-2	DCP1A	mRNA-decapping enzyme 1A	1	ASS(0.021)PS(0.979)PLTIGTPESQR;AS(0.005)S(0.052)PS(0.936)PLT(0.007)IGTPESQR	291.13	4.622499999999998e-171	122988000.0	1311.04	1408.73	1531.04	1301.62	1377.96	1409.6	1188.83	1494.9	1385.3600000000001	1731.89	True	False	1253.4082513949713	1641.4986881841996	1209.6956268995523	1187.5089954954203	1559.1858927851986	1681.985250245639	1455.4553899475031	1442.323519682615	1320.9549159804603	1418.2279386427738	0.8837847691778425	1.157429383146332	0.852962767083277	0.8373188562565277	1.0993901969505127	1.1859766716027873	1.026249272271674	1.0169899212836693	0.9314122786528923	1.0	10.469873706888288	-7.78199653274992	24.996327047185893	1.0504635428213394	0.9432056165885694	0.2091547917168205	0.10390509828104334	420.54691726985624	511358.5173423232	0.03398687394290271	0.03857947910820205	1.651974986947223e-08	7.78199653274992	-0.10725792623276997	
ASSS(ph)GPRSPLDQR	ddPTM_K562_Methotrexat_30min_R1	1	ASSSGPRSPLDQR	13	1	O14646;O14646-2	O14646;O14646-2	CHD1	Chromodomain-helicase-DNA-binding protein 1	1	AS(0.019)S(0.101)S(0.548)GPRS(0.331)PLDQR	95.428	0.021868000000000002	10736000.0	1465.4	1158.2	1814.1	1247.9	1102.1	1151.4	1077.3	1144.1	1296.3	1371.4	True	False	1400.9827706204155	1349.5728639660829	1433.3452011433253	1138.4985444897407	1247.0454675306737	1373.8917544926421	1318.9119483781908	1103.8613545179467	1236.0352959414674	1123.0261708622957	1.2475067874372827	1.2017287744326006	1.276323952488798	1.013777393643075	1.1104331313785432	1.2233835596526872	1.174426725394554	0.9829346663135787	1.1006291108891966	1.0	10.133175833178258	-3.0000000046269166	0.11495665187405119	0.9380913768037122	1.9073514788295018	0.4407766149284422	0.0763509527110357	102.26394470454522	0.816223355027525	0.6439720702662177	15.792918759771391	0.0009999999893461307	3.0000000046269166	0.9692601020257896	
ASSSGPRS(ph)PLDQR	ddPTM_K562_Methotrexat_30min_R1	2	ASSSGPRSPLDQR	13	1	O14646;O14646-2	O14646;O14646-2	CHD1	Chromodomain-helicase-DNA-binding protein 1	1	ASS(0.001)S(0.001)GPRS(0.999)PLDQR;ASSSGPRS(1)PLDQR	154.13	1.5482e-07	39999000.0	4959.4	4325.700000000001	5229.1	5043.0	3856.3	4040.1000000000004	3983.8	4466.1	4719.5	4715.9	True	False	4741.390714217886	5040.448400671809	4131.583369879591	4600.888019762608	4363.471042953033	4820.792146365924	4877.268560242306	4309.024731590423	4500.091475118227	3861.804811994675	1.2277654995641514	1.3052053757394197	1.0698581546760184	1.1913828491466885	1.1299046055875726	1.2483262052480375	1.262950562673086	1.1158059356616608	1.1652819586171337	1.0	11.915059532357278	-10.318355969387195	1.1188328390165092	1.000880923799831	1.1989873834298739	0.43337890227516773	0.06746079511144534	1.082511975236168	2.3697189929975155	0.0660542452290404	0.020687127219402555	4.8044539004778706e-11	10.318355969387195	0.1981064596300428	
ASSVSTKES(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	4	ASSVSTKESPAR	12	1	Q13428;Q13428-3;Q13428-4;E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5	Q13428	TCOF1	Treacle protein	1	ASS(0.005)VS(0.001)T(0.004)KES(0.99)PAR;ASSVS(0.01)T(0.052)KES(0.938)PAR;AS(0.009)S(0.031)VS(0.009)T(0.002)KES(0.949)PAR;ASSVS(0.001)TKES(0.999)PAR	205.26	5.7622e-11	90741000.0	13113.599999999999	10305.3	17188.9	13742.3	9538.4	7909.1	8645.7	11386.0	11988.7	15348.6	True	False	12537.141845781282	12008.075664850341	13581.18479021693	12537.533895297178	10792.866788399035	9437.42163927198	10584.718306964935	10985.547926353769	11431.347953755672	12568.819809025106	0.9974796390015013	0.9553860941047051	1.0805457470609046	0.9975108312313091	0.8587016881767341	0.7508598088497849	0.8421409860108363	0.8740317781042211	0.9095005042197625	1.0	13.617561569037184	-7.747232522541889	6.1336341910226215	0.8582811633510609	1.010198955211484	0.49880050362860173	0.06551990841201491	0.1238149171483695	16.75132724249583	0.01997925342831739	0.024790668907882837	1.7896474149973542e-08	7.747232522541889	0.1519177918604232	
ASTAPGAEAS(ph)PSPCITER	ddPTM_K562_Methotrexat_30min_R1	3	ASTAPGAEASPSPCITER	18	0	Q66PJ3	Q66PJ3	ARL6IP4	ADP-ribosylation factor-like protein 6-interacting protein 4	1	AS(0.001)T(0.022)APGAEAS(0.743)PS(0.232)PCIT(0.001)ER;ASTAPGAEAS(0.999)PS(0.001)PCITER;ASTAPGAEAS(0.907)PS(0.092)PCIT(0.001)ER	273.32	1.2549999999999996e-134	32343000.0	3725.01	2872.2400000000002	4354.16	4006.0	3435.6700000000005	3127.71	3018.96	3841.52	3748.8900000000003	4437.04	True	False	3561.263020601033	3346.828840267607	3440.2813191170403	3654.8001997162405	3887.520825180212	3732.095691718069	3696.03862960719	3706.411564205735	3574.604922164627	3633.4490602033247	0.9801329154733623	0.9211162134966938	0.9468362600147544	1.0058762732486803	1.069925781472954	1.0271495842876146	1.0172259383210847	1.0200807835182166	0.9838048815151396	1.0	11.82712396500184	-7.318733136380888	4.319395354311312	1.0220467595741585	0.9461292624699171	0.6156683945943849	0.02478978275608903	0.13362957774540865	5.1856418823867525	0.007205975355975809	0.011239261500174175	4.800283240066819e-08	7.318733136380888	-0.07591749710424134	
ASTDVAGQAVTINLVPT(ph)EEQAK	ddPTM_K562_Methotrexat_30min_R1	1	ASTDVAGQAVTINLVPTEEQAK	22	0	H3BUZ5;H0YN99;Q9H792	H3BUZ5	PEAK1	Pseudopodium-enriched atypical kinase 1	1	ASTDVAGQAVTINLVPT(1)EEQAK	45.878	0.029844	187950000.0	1330.4	1188.4	1028.1	1289.7	1210.6	1236.3	1244.9	1201.6	1121.9	1398.2	True	False	1271.9172089759809	1384.7629006538527	812.3158598177905	1176.634003388426	1369.8151193109813	1475.197477921881	1524.1005147461346	1159.3390469266358	1069.7431138754393	1144.9724311649861	1.1108714710989425	1.2094290333653577	0.7094632479415034	1.0276526939528359	1.1963738881618506	1.2884130986637798	1.3311242028730712	1.0125475647889897	0.9342959574904328	1.0	10.161097145953399	-4.838482155354665	1.7629810358372742	1.0859607117839678	6.234694890447821	0.002441092016204016	0.17583150269937428	2072.215624450986	70.51125050391538	0.052085184135209454	41995.845663941305	1.4505003724210789e-05	4.838482155354665	5.148734178663854	
ASTPQPAPAGVPALAS(ph)QHPPEEEVHYHLPVAR	ddPTM_K562_Methotrexat_30min_R1	1	ASTPQPAPAGVPALASQHPPEEEVHYHLPVAR	32	0	Q96T58	Q96T58	SPEN	Msx2-interacting protein	1	AS(0.078)T(0.245)PQPAPAGVPALAS(0.676)QHPPEEEVHYHLPVAR	58.711999999999996	0.00090951	11523000.0	261.44	300.57	450.85	455.73	238.23	233.56	302.61	0.0	242.45	390.72	True	False	249.9474106394168	350.23408368354836	356.2227462297934	415.7768584664708	269.56142067855217	278.6921644774204	370.4779956360572	0.0	231.1785524191998	319.9568218457896	0.7811910657116247	1.0946292117264234	1.113346307713617	1.2994780235280117	0.8424931186760987	0.871030543651738	1.1578999738115208	0.0	0.7225304685974832	1.0	8.321733416412433	-9.225925185420728	24.99939288158542	0.5209483984733261	1.0269685753309628	0.35161734559872937	0.2763532653312776	536.9380117573177	377965.99269066995	0.12438427877931162	0.07181005437457905	5.943945443227973e-10	9.225925185420728	0.5060201768576367	
ASTVS(ph)PGGYMVPK	ddPTM_K562_Methotrexat_30min_R1	1	ASTVSPGGYMVPK	13	0	Q5TGY3	Q5TGY3	AHDC1	AT-hook DNA-binding motif-containing protein 1	1	AST(0.001)VS(0.999)PGGYMVPK	135.1	6.725600000000001e-05	6489900.0	1808.8	1824.2	2746.2	2058.3	1412.3	1305.7	1357.2	1902.2	1840.2	2312.9	True	False	1729.2873177959657	2125.6180439016825	2169.8101490434947	1877.852034716909	1598.0422046942847	1558.0080457191634	1661.5866484163007	1835.2985478227754	1754.6495036577098	1894.011397540762	0.9130289923499517	1.1222836603104107	1.14561620477091	0.9914681807908682	0.8437342070745868	0.8225969747289406	0.8772843978519622	0.9690007938736689	0.9264197173976865	1.0	10.88722929716113	-7.539727496473694	5.977213384711621	0.9001550239394476	1.0673098797856702	0.45171488368090573	0.07624273678294442	0.1369777005485306	17.39454229260828	0.02313892796275464	0.030980226339355384	2.8858416927630716e-08	7.539727496473694	0.16715485584622258	
ASVALTPT(ph)APSR	ddPTM_K562_Methotrexat_30min_R1	1	ASVALTPTAPSR	12	0	E7EUL7;E9PHV5;P28290-2;P28290-3;P28290;H7BZ26	E7EUL7	SSFA2	Sperm-specific antigen 2	1	ASVALT(0.058)PT(0.941)APSR	140.45	8.285599999999999e-06	13064000.0	1240.8	1177.5	1586.1	1446.7	1213.6	1050.4	1133.0	1429.1	1395.2	1521.5	True	False	1186.2559176919697	1372.061860922175	1253.1992853389713	1319.8700571466525	1373.2096718947696	1253.3749339231128	1387.104091258229	1378.8377429784082	1330.3374565282224	1245.9416063635565	0.9520959181660308	1.1012248518826793	1.0058250554747885	1.0593354057730409	1.102146091663687	1.0059660320528596	1.1132978336815267	1.1066632143401378	1.0677366015659324	1.0	10.28302073971435	-6.2495250541318965	24.252058977448918	1.0649943398213801	0.9520958136253418	0.3771385484233042	0.04244005217167199	1271.1173513033789	2587338.16395144	0.010260185647718497	0.16151763032083577	5.629566398995027e-07	6.2495250541318965	-0.11289852619603835	
ASVPAALAS(ph)PSAR	ddPTM_K562_Methotrexat_30min_R1	1	ASVPAALASPSAR	13	0	I3L0A5;F5H0I3;P35711-3;P35711-2;P35711-5;P35711	I3L0A5	SOX5	Transcription factor SOX-5	1	ASVPAALAS(0.859)PS(0.141)AR	95.195	0.0096936	11486000.0	1582.1	1613.8	1554.4	1472.4	1787.3	1502.9	1232.9	1632.4	1399.4	1344.4	True	False	1512.5527783530506	1880.4530200901952	1228.1526821328412	1343.3169780484766	2022.3612776677003	1793.314154791552	1509.4092092782619	1574.987566746873	1334.3421994449504	1100.916132497645	1.3739037277267676	1.7080801748485754	1.1155733355878208	1.2201810277781082	1.8369803275382797	1.6289289454983875	1.3710483157821203	1.4306153940842918	1.2120289275966303	1.0	10.104488853620396	-9.954090704050751	1.7290996943741916	0.9997033539887468	1.4721517711324175	0.3468161900978487	0.20577213026370011	0.42726003388590594	2.8815772718293498	0.20653242126138835	0.059623104534969246	1.1114995621363083e-10	9.954090704050751	0.4724484171436707	
ASVPAAPNPAATSAT(ph)SVHVRSPARPSESR	ddPTM_K562_Methotrexat_30min_R1	1	ASVPAAPNPAATSATSVHVRSPARPSESR	29	2	Q8IY33-2;Q8IY33;Q8IY33-4;Q8IY33-5	Q8IY33-2	MICALL2	MICAL-like protein 2	1	ASVPAAPNPAAT(0.088)S(0.186)AT(0.227)S(0.227)VHVRS(0.145)PARPS(0.104)ES(0.023)R	50.055	0.0040384999999999996	18616000.0	2195.7	1978.7	2384.9	2457.4	2160.5	1905.1	2158.7	2140.4	1970.4	2536.0	True	False	2099.1796570569445	2305.6465428507067	1884.3420815868578	2241.9635573596324	2444.643619090844	2273.2336125446714	2642.8434261245716	2065.1209188097305	1878.7965340762703	2076.7058256575624	1.010821865630519	1.1102422472959805	0.9073707302719224	1.0795768614217391	1.1771737666873345	1.0946343889726804	1.2726132866159554	0.99442149836308	0.9047003725149051	1.0	11.020081151339163	-9.508413432974908	24.790325844241114	0.9514203863399342	1.0926190094656505	0.29000165958654156	0.09251087552745596	754.9067719250302	1293754.9075240737	0.05562300008090413	0.025100563979344195	3.1016055635729144e-10	9.508413432974908	0.1411986231257163	
ASVRGS(ph)SEEDEDART(ph)PDR	ddPTM_K562_Methotrexat_30min_R1	1	ASVRGSSEEDEDARTPDR	18	2	Q8NC56;H7C2Z0	Q8NC56	LEMD2	LEM domain-containing protein 2	2	AS(0.004)VRGS(0.841)S(0.156)EEDEDART(0.999)PDR	106.75	0.005337	6558800.0	1288.1	1352.9	1681.6	1605.1	1264.2	1346.6	1185.2	1391.7	1431.0	1671.9	True	False	1231.4766663273908	1576.4437296319416	1328.6551404236902	1464.383375078517	1430.4644588079823	1606.8113918705853	1451.0112700434722	1342.7531221769314	1364.4731223422348	1369.10270895776	0.8994771964660431	1.1514429993583328	0.9704568778737859	1.069593512230569	1.044818952916202	1.1736237035815837	1.0598264546186356	0.9807541197541801	0.9966185249760776	1.0	10.419014965111655	-12.93612362135261	7.480331039029661	0.9854120605909532	1.0438339307545224	0.01718237886930918	0.0785982185706923	0.023302643182405196	0.00019898677931791715	0.09274155372371715	0.017909344839812512	1.158447558646439e-13	12.93612362135261	0.058421870163569145	
ASVS(ph)PMDEPVPDSESPIEK	ddPTM_K562_Methotrexat_30min_R1	3	ASVSPMDEPVPDSESPIEK	19	0	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	AS(0.032)VS(0.968)PMDEPVPDSESPIEK;AS(0.003)VS(0.997)PMDEPVPDSESPIEK;AS(0.024)VS(0.976)PMDEPVPDSESPIEK	197.75	8.1253e-25	35041000.0	8040.1	6596.299999999999	11639.900000000001	8139.6	6179.9	5906.799999999999	5816.5	8540.6	8568.9	9778.2	True	False	7686.66683094391	7686.2264570708585	9196.844058645169	7426.0139055442605	6992.665170849112	7048.205502377231	7120.99818782303	8240.222257141837	8170.533709321023	8007.273227304717	0.9599606024098762	0.959905605676213	1.1485612889146868	0.9274085815158188	0.8732891925061578	0.8802254278451402	0.8893162485751706	1.0290921794753758	1.020389023501732	1.0	12.967095319906738														
ASVSPMDEPVPDSES(ph)PIEK	ddPTM_K562_Methotrexat_30min_R1	1	ASVSPMDEPVPDSESPIEK	19	0	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	AS(0.001)VS(0.002)PMDEPVPDS(0.033)ES(0.964)PIEK	84.829	0.0063321	0.0	866.36	677.39	1149.9	976.06	658.7	852.49	782.19	719.82	825.27	1088.4	True	False	828.2758517501729	789.317183838702	908.5517043132742	890.4903352309121	745.3305956469055	1017.2216273991947	957.6160186595533	694.5035226021404	786.9033778304521	891.2802131883641	0.9293102657212522	0.8855993571483977	1.019378295253661	0.9991137714651755	0.8362472145327281	1.1413039494731991	1.0744275531865417	0.779220173774197	0.8828911112202006	1.0	9.799735267562072	-12.474560645430866	5.610462895348763	1.0000537866586623	0.9522872173576657	0.01965076430431667	0.10514182799534406	7.387243655796414e-05	6.918411916154868e-06	0.10631406801012633	0.025755925761941197	3.353044788396338e-13	12.474560645430866	-0.04776656930099654	
ASYHFSPEELDENTS(ph)PLLGDAR	ddPTM_K562_Methotrexat_30min_R1	2	ASYHFSPEELDENTSPLLGDAR	22	0	E5RJU4;E5RFM9;H0YAY0;R4GMT7;E7EVI4;E7ET87;O75410-3;O75410-7;O75410-9;O75410;O75410-2	E5RJU4	TACC1	Transforming acidic coiled-coil-containing protein 1	1	ASYHFSPEELDENT(0.222)S(0.778)PLLGDAR;ASYHFSPEELDENT(0.33)S(0.67)PLLGDAR	210.31	1.4963999999999999e-33	130668000.0	5897.6	4534.4	5505.0	5244.200000000001	4175.3	3980.6000000000004	4073.9	5184.3	4769.9	5465.700000000001	True	False	5638.348565586846	5283.632528378351	4349.575730276174	4784.44912814576	4724.425134362417	4749.794613456152	4987.575778796914	5001.965230510789	4548.148390118957	4475.808766284125	1.2597384875019753	1.1804866571108872	0.9717965975314107	1.0689574505923032	1.0555466913490803	1.0612148242873864	1.114340678799301	1.1175556176997896	1.0161623580479486	1.0	12.12793268160478	-6.571682131330787	5.806959794508781	1.0586270339196473	1.2419698479034553	0.7074693740408291	0.044613475318695896	0.08895498161523828	6.742828792797548	0.011576026096573083	0.032590742822792625	2.6811299785853375e-07	6.571682131330787	0.18334281398380803	
AT(ph)ISDEEIER	ddPTM_K562_Methotrexat_30min_R1	1	ATISDEEIER	10	0	C9J0A7;Q9UQN3-2;Q9UQN3	C9J0A7	CHMP2B	Charged multivesicular body protein 2b	1	AT(0.51)IS(0.49)DEEIER	171.67	0.00042873	163030000.0	1505.9	1046.0	1705.2	1688.8	1175.6	1311.2	1205.8	1362.4	1386.0	1394.9	True	False	1439.7024391137475	1218.833721039996	1347.301822936773	1540.7455260311497	1330.2120058334635	1564.5708428788898	1476.2313444299853	1314.4836197843297	1321.565162520153	1142.2700931426386	1.2603870553529126	1.0670276043792004	1.1794949644790635	1.3488451945653384	1.1645336893779255	1.3697030608359955	1.2923662742220143	1.1507642786723877	1.15696381307177	1.0	10.157688105210006	-12.477484534616957	8.585142317198331	0.999992752386565	1.2218527315118162	0.34711729069880726	0.09097168364238557	1.3123399107461907e-05	7.987751941896876e-07	0.09159845365677834	0.022215163021772743	3.330546222927258e-13	12.477484534616957	0.22185997912525113	
AT(ph)IT(ph)LYGKSDEGES(ph)MPT(ph)FGK	ddPTM_K562_Methotrexat_30min_R1	1	ATITLYGKSDEGESMPTFGK	20	1	F5H6B2;Q9UHN6-2;Q9UHN6	F5H6B2	TMEM2	Transmembrane protein 2	4	AT(0.907)IT(0.583)LY(0.509)GKS(0.015)DEGES(0.993)MPT(0.993)FGK	49.343	0.027423000000000003	0.0	0.0	0.0	75.293	161.18	0.0	0.0	0.0	0.0	80.34	149.03	True	False	0.0	0.0	59.490028239724616	147.0495996480938	0.0	0.0	0.0	0.0	76.60501093569196	122.03922286977381	0.0	0.0	0.4874664623455159	1.2049372012554371	0.0	0.0	0.0	0.0	0.627708118212421	1.0	6.931201087934928	-9.991484951910875	5.022624388331985	0.9989081391339558	0.22757899529269804	0.32611119057301285	0.3653914099569744	0.19240289539544161	15.605096226887143	0.3842528033696459	0.10016311325002247	1.0198000950017452e-10	9.991484951910875	-0.7713291438412577	
AT(ph)SAMGT(ph)ISIMGDTS(ph)VSTLTPALSNTRK	ddPTM_K562_Methotrexat_30min_R1	1	ATSAMGTISIMGDTSVSTLTPALSNTRK	28	1	Q8WXI7	Q8WXI7	MUC16	Mucin-16	3	AT(0.88)S(0.186)AMGT(0.459)IS(0.46)IMGDT(0.065)S(0.426)VS(0.426)T(0.058)LT(0.013)PALS(0.013)NT(0.013)RK	47.806999999999995	0.0070932	22863000.0	0.0	0.0	61.67100000000001	0.0	0.0	0.0	0.0	144.12	0.0	0.0	True	False	0.0	0.0	48.72709988408031	0.0	0.0	0.0	0.0	139.05121791200636	0.0	0.0											0.0														
AT(ph)SEDT(ph)LS(ph)LRR	ddPTM_K562_Methotrexat_30min_R1	1	ATSEDTLSLRR	11	1	Q6ZS81-5;Q6ZS81-4;Q6ZS81	Q6ZS81-5	WDFY4	WD repeat- and FYVE domain-containing protein 4	3	AT(0.972)S(0.062)EDT(0.966)LS(1)LRR	58.273999999999994	0.033691000000000006	0.0	1287.0	1094.6	1515.2	999.74	1124.1	935.21	864.88	1239.8	1460.1	1185.2	True	False	1230.4250210102873	1275.464044981242	1197.1802264331448	912.0943463964838	1271.9388531451143	1115.9260966814875	1058.8513560877477	1196.1955312746697	1392.2202696938486	970.5487951771856	1.2677621435670918	1.3141678721556604	1.2335085390679248	0.9397717568955096	1.3105357087305498	1.1497887609842032	1.0909820931717724	1.2324939634346663	1.4344670526737213	1.0	9.922656937273675	-7.0029974915147255	24.730759977511543	1.1704307324532268	1.2866833653073455	0.1231936358756619	0.13538767041676836	237.87997740678006	1962706.5413485826	0.03543667949254406	0.07163042820374659	9.931217846765893e-08	7.0029974915147255	0.11625263285411869	
AT(ph)SNVFAMFDQSQIQEFK	ddPTM_K562_Methotrexat_30min_R1	2	ATSNVFAMFDQSQIQEFK	18	0	J3QRS3;P19105;O14950;J3KTJ1;P24844-2;P24844	J3QRS3	MYL12A;MYL12B;MYL9	Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9	1	AT(0.5)S(0.5)NVFAMFDQSQIQEFK;AT(0.5)S(0.5)NVFAMFDQSQIQEFK	107.88	0.004150899999999999	8639500.0	3930.7999999999997	2136.8	2677.1	3060.6000000000004	2218.1099999999997	2176.5	1969.48	3603.1000000000004	4512.200000000001	5839.8	True	False	3758.006738607025	2489.869880610193	2115.213294736121	2792.2819498880503	2509.8303438748394	2597.0778214810116	2411.1860244053455	3476.376930743481	4302.428806871164	4782.155631181006	0.7858394892261052	0.5206584796980545	0.4423137718363519	0.5838960847868653	0.5248324265128547	0.5430768092421188	0.5042048419929563	0.7269476777536308	0.8996839790863584	1.0	12.223445366756685	-9.662460563356559	2.069713875414393	0.989063800616288	0.5508438146457053	0.7666287802901912	0.0866467663239777	0.1451364351041576	1.144769568771814	0.07861489029747351	0.02366507259600884	2.175401565059859e-10	9.662460563356559	-0.43821998597058265	
AT(ph)SPLVSLYPALECR	ddPTM_K562_Methotrexat_30min_R1	1	ATSPLVSLYPALECR	15	0	A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3;Q96G74-4	A0A087WXV6	OTUD5	OTU domain-containing protein 5	1	AT(0.611)S(0.389)PLVSLYPALECR	146.84	1.8261e-08	81955000.0	1530.8	1334.2	2213.9	1847.0	1615.4	1334.3	1620.8	2194.7	1810.2	2188.0	True	False	1463.5078649281647	1554.6538724775921	1749.2326447335915	1685.0763776524966	1827.8534146166862	1592.1345909497413	1984.305658527218	2117.5111570321988	1726.044197109655	1791.7319978465093	0.8168118148736314	0.8676821502022275	0.9762802957339614	0.9404734523231139	1.0201600556409058	0.8886008581994043	1.107479054296158	1.1818235983825955	0.9633383782754313	1.0	10.807139143992313	-6.122678610504732	0.4299714285425439	1.0607364054298805	0.6087042366051116	0.47605574317410315	0.07533163269652152	5.127899197794545	0.6787951526555875	0.05846239941969935	1.2226860195250893	7.539132732704908e-07	6.122678610504732	-0.4520321688247688	
AT(ph)T(ph)AVPMGPSLPT(ph)TSPRGAPSCR	ddPTM_K562_Methotrexat_30min_R1	1	ATTAVPMGPSLPTTSPRGAPSCR	23	1	Q9ULR0-1	Q9ULR0-1			3	AT(0.945)T(0.982)AVPMGPS(0.073)LPT(0.639)T(0.155)S(0.155)PRGAPS(0.052)CR	41.711000000000006	0.031581	0.0	59.268	113.8	0.0	0.0	113.74	0.0	0.0	64.46600000000001	0.0	0.0	True	False	56.66264968549941	132.6035157307376	0.0	0.0	128.6988036266571	0.0	0.0	62.198694240323384	0.0	0.0											0.0														
AT(ph)TRSPSWTAPPVIALQNGLSEDEALQR	ddPTM_K562_Methotrexat_30min_R1	1	ATTRSPSWTAPPVIALQNGLSEDEALQR	28	1	A0A087X0D9;E9PFU9;Q8WV99	A0A087X0D9	ZFAND2B	AN1-type zinc finger protein 2B	1	AT(0.22)T(0.22)RS(0.146)PS(0.207)WT(0.207)APPVIALQNGLSEDEALQR	94.20299999999999	6.1307e-05	7592900.0	612.18	569.87	575.18	558.23	541.17	477.37	551.63	582.42	415.04	551.23	True	False	585.269300203635	664.0313313662164	454.4575782997728	509.29084260798743	612.3433405893971	569.6149963888768	675.34706960351	561.9359584812014	395.7448809901616	451.39690547208926	1.2965735766210815	1.471058669912115	1.0067804470756896	1.1282550598687653	1.3565519239636425	1.2618938886901545	1.4961269371069448	1.2448821683735423	0.8767115507277914	1.0	8.818252718017868	-9.713623522932703	6.523094104813303	0.9388139485483844	1.2850352618325889	0.49311101496579846	0.13986249478648377	0.15315305993941952	15.110979534759949	0.10475111979697284	0.037436700948143296	1.933643809437598e-10	9.713623522932703	0.34622131328420447	
ATAGDTHLGGEDFDNR	ddPTM_K562_Methotrexat_30min_R1	4	ATAGDTHLGGEDFDNR	16	0	A0A0G2JIW1;P0DMV8-2;P0DMV9;P0DMV8;V9GZ37;Q53FA3;P34931;P17066;P48741	A0A0G2JIW1;P17066	HSPA1A;HSPA1B;HSPA1L;HSPA6;HSPA7	Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7	0	;;;	168.45	3.2915e-09	888530000.0	34576.3	29653.4	37874.2	32683.7	30890.4	28245.100000000002	28801.8	39308.5	38486.299999999996	40373.9	False	True	33056.367252492615	34553.12032838183	29924.923001566905	29818.370765717857	34953.02904474141	33703.06582840034	35261.3368187125	37925.99777473012	36697.08031334731	33061.795478910026	0.9998358157402288	1.045107194811096	0.9051209278895903	0.9018981072803158	1.0572029902924598	1.0193961138589516	1.0665281878355806	1.147124565540397	1.109954247244564	1.0	15.01287745439692	-8.388004989664623	1.4920356002375956	1.0935372617061858	0.9701454114702638	0.4089147991982721	0.057590668206656564	0.3851133844241677	1.719947947391978	0.02869462706635712	0.02350782122879807	4.09255957709171e-09	8.388004989664623	-0.12339185023592203	
ATAPQTQHVS(ph)PMR	ddPTM_K562_Methotrexat_30min_R1	9	ATAPQTQHVSPMR	13	0	E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;P29692-2;E9PQZ1;P29692-4;E9PPR1;E9PL12;E9PK06;P29692-3;E9PL71	E9PQ49;P29692-3	EEF1D	Elongation factor 1-delta	1	ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.017)QHVS(0.983)PMR;ATAPQTQHVS(1)PMR	142.95	4.3027e-09	3540015700.0	19691.07	17945.53	22585.87	20477.080000000005	18424.33	18471.010000000002	16523.510000000002	20964.190000000002	20854.46	21008.300000000003	True	False	18825.474140221482	20910.723810645184	17845.404541175787	18681.886189117693	20847.452335350154	22040.271266415803	20229.327734286217	20226.867555083998	19884.940706471876	17203.49329541078	1.0942820633553179	1.2154928915642587	1.0373128430803205	1.085935621813582	1.2118150643806418	1.281150920220098	1.1758848849426768	1.1757418803121653	1.155866449041277	1.0	14.070413924026285	-7.758887649587388	24.99858043196372	1.1817077653499417	1.1108482820161905	0.09963655188040921	0.07861514969791343	128.47388986850424	1258609.831540798	0.023306626168154328	0.028716600172606643	1.7422575308228136e-08	7.758887649587388	-0.07085948333375125	
ATAPQTQHVS(ph)PMRQVEPPAK	ddPTM_K562_Methotrexat_30min_R1	3	ATAPQTQHVSPMRQVEPPAK	20	1	E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;P29692-2;E9PQZ1;P29692-4;E9PPR1;E9PL12;E9PK06;P29692-3;E9PL71	E9PQ49;P29692-3	EEF1D	Elongation factor 1-delta	1	ATAPQT(0.002)QHVS(0.998)PMRQVEPPAK;ATAPQT(0.047)QHVS(0.953)PMRQVEPPAK;ATAPQT(0.005)QHVS(0.995)PMRQVEPPAK	75.10600000000001	0.005628	313302000.0	8812.92	5948.6900000000005	12168.599999999999	9090.189999999999	6101.5199999999995	6329.25	5423.38	7463.849999999999	7165.98	9802.289999999999	True	False	8425.514589092449	6931.609912058709	9614.577153758157	8293.267156130452	6903.976827010029	7552.287986036615	6639.71102069555	7201.342164949543	6832.835153907768	8027.000294867846	1.0496467272437249	0.8635367705779845	1.1977795939418796	1.0331714029502213	0.8600942535686918	0.9408605591886244	0.8271721411223475	0.8971398904213076	0.8512314566970203	1.0	12.970645235263348	-7.753621309052524	24.619985353643436	0.889733372916003	1.0352657510016148	0.37718498839596715	0.08787215382381516	152.59019792628564	480520.59488093306	0.02570847584220089	0.032560605185504916	1.7635131034057905e-08	7.753621309052524	0.1455323780856118	
ATASSCNS(ph)PFPQRPR	ddPTM_K562_Methotrexat_30min_R1	1	ATASSCNSPFPQRPR	15	1	A0A0A0MTQ1;Q96GE4-2;Q96GE4	A0A0A0MTQ1	CEP95	Centrosomal protein of 95 kDa	1	ATAS(0.001)S(0.003)CNS(0.996)PFPQRPR	89.46600000000001	0.030869999999999998	8737600.0	1042.1	1217.4	1552.3	1228.9	1126.4	1038.1	1059.2	1347.0	1407.6	1415.2	True	False	996.2905317753077	1418.5546577381372	1226.4934434346424	1121.1642449903366	1274.5413434593506	1238.6981330022693	1296.7525626308181	1299.6252465131313	1342.160983234752	1158.8935664316173	0.8596911404409766	1.2240594812395498	1.0583313938062267	0.967443669950249	1.0997915428798417	1.0688627229300967	1.118957426456069	1.1214362424280644	1.1581399898244658	1.0	10.178532359002851	-7.927416926684971	24.999967423393542	1.1006287955255043	1.0423873374581816	0.0998187389306543	0.09352277802889696	115.91931513115104	39923.54784382066	0.02822850362248847	0.03200810918528108	1.1819063699651016e-08	7.927416926684971	-0.05824145806732273	
ATDDDMQSLASLMSVKPSDVGNLDDFAES(ph)DEDEAHGPGAPEAR	ddPTM_K562_Methotrexat_30min_R1	2	ATDDDMQSLASLMSVKPSDVGNLDDFAESDEDEAHGPGAPEAR	43	1	Q8N3D4;E9PIH6;A0A0U1RQH4	Q8N3D4	EHBP1L1	EH domain-binding protein 1-like protein 1	1	AT(0.001)DDDMQS(0.011)LAS(0.273)LMS(0.151)VKPS(0.151)DVGNLDDFAES(0.413)DEDEAHGPGAPEAR;ATDDDMQS(0.004)LAS(0.01)LMS(0.011)VKPS(0.073)DVGNLDDFAES(0.901)DEDEAHGPGAPEAR	52.25899999999999	0.00018511	135086000.0	1394.6	1012.5799999999999	1921.6100000000001	1643.6399999999999	964.73	881.5799999999999	854.6600000000001	1561.0900000000001	1298.04	1613.01	True	False	1333.2950538468906	1179.8916340828664	1518.2903213544053	1499.544633115727	1091.6089047190517	1051.9328581949135	1046.3392609309437	1506.1855798657648	1237.694403721254	1320.878258613526	1.0094004085178887	0.8932629683233277	1.1494551533826403	1.1352633169159285	0.8264265821627428	0.796388956616703	0.7921542005159847	1.1402909920303697	0.9370238291456271	1.0	10.367281788500275	-5.884580850999308	17.140734084727693	0.9633364224048317	5.392473616599691	0.010580453030776149	0.133558201565149	1039.0544141042385	155473.15430805957	0.034820409390093364	1355.5233681821396	1.3044251060310484e-06	5.884580850999308	4.429137194194859	
ATDIPASAS(ph)PPPVAGVPFFK	ddPTM_K562_Methotrexat_30min_R1	2	ATDIPASASPPPVAGVPFFK	20	0	Q8N1G0;F8WCX2;Q8N1G0-2	Q8N1G0	ZNF687	Zinc finger protein 687	1	ATDIPAS(0.002)AS(0.998)PPPVAGVPFFK;ATDIPAS(0.235)AS(0.765)PPPVAGVPFFK	198.85	3.4671999999999995e-17	20049800.0	10576.3	8515.8	14005.0	9953.7	7933.1	7688.6	7418.5	10447.2	11226.0	12158.9	True	False	10111.378515704047	9922.891206149521	11065.54188964902	9081.074575116218	8976.441700814437	9174.313134959297	9082.287467783919	10079.766054470672	10704.105710282274	9956.805387850052	1.0155243696981981	0.9965938691799766	1.111354642238154	0.9120470091940877	0.9015383299314136	0.9214113139295056	0.9121688246379429	1.0123494094572407	1.0750542260617173	1.0	13.281467216674772	-7.275271320510768	24.983581471448957	0.9562989688531914	1.0367012581047308	0.2688893218890487	0.05908131851344837	1067.6708271131797	1928450.6233433897	0.01796547348940132	0.026790786735568846	5.305528838259748e-08	7.275271320510768	0.08040228925153936	
ATDPPESTRQDAPPWGSGVELTHLGS(ph)PSAQR	ddPTM_K562_Methotrexat_30min_R1	3	ATDPPESTRQDAPPWGSGVELTHLGSPSAQR	31	1	Q8NDX1-2;Q8NDX1	Q8NDX1-2	PSD4	PH and SEC7 domain-containing protein 4	1	ATDPPES(0.001)T(0.001)RQDAPPWGS(0.009)GVELT(0.009)HLGS(0.754)PS(0.227)AQR;ATDPPES(0.001)T(0.001)RQDAPPWGS(0.015)GVELT(0.058)HLGS(0.671)PS(0.254)AQR;ATDPPESTRQDAPPWGSGVELT(0.149)HLGS(0.626)PS(0.225)AQR	91.98299999999999	5.4491e-07	154910000.0	2713.8	2410.65	3008.2299999999996	2652.76	2492.96	2395.88	2305.94	2924.8199999999997	2511.79	3181.5699999999997	True	False	2594.5046014123686	2808.968938456087	2376.843632895312	2420.1966494756007	2820.827936426157	2858.8499016448086	2823.105744215358	2821.9524227962415	2395.017431144657	2605.35684295636	0.9958346429306485	1.0781513273508758	0.912291012772842	0.9289309662200999	1.0827031022841758	1.0972968671734056	1.0835773809056854	1.0831347077946165	0.9192665632808188	1.0	11.347265269567416	-7.7727714381360755	24.93061466207849	1.0530972417157485	0.9811475785045841	0.18777899706812318	0.06518022838744084	342.4667799062601	753426.9757059071	0.020979585759228356	0.024001001727078853	1.6874408634185e-08	7.7727714381360755	-0.07194966321116436	
ATDS(ph)FSGRFEDVYQLQEDVLGEGAHAR	ddPTM_K562_Methotrexat_30min_R1	1	ATDSFSGRFEDVYQLQEDVLGEGAHAR	27	1	Q9HBH9;Q9HBH9-2	Q9HBH9	MKNK2	MAP kinase-interacting serine/threonine-protein kinase 2	1	AT(0.024)DS(0.488)FS(0.488)GRFEDVYQLQEDVLGEGAHAR	114.19	3.0147e-12	6618300.0	1298.5	1085.7	1085.3	1454.7	780.9	961.26	1182.7	1086.3	1085.6	1317.9	True	False	1241.4194947799995	1265.0934712553753	857.5103615020406	1327.168709567453	883.6020375598434	1147.0098905016484	1447.9505814043328	1048.0942132792982	1035.1306929522923	1079.2155392878951	1.1502980170199664	1.1722342990818397	0.7945682120810237	1.2297531505552324	0.8187447320698102	1.0628181755597093	1.34166950779799	0.9711630115804931	0.9591510270833465	1.0	10.075767311126311	-3.863256232391861	0.008881091512406228	0.12979697876844062	2.062681390419656	0.019883374257609998	0.16513883321724693	100479.48922962842	79.83154277627017	7748.191406845293	9727.870002146297	0.00013700731887444947	3.863256232391861	1.9328844116512156	
ATDSFS(ph)GRFEDVYQLQEDVLGEGAHAR	ddPTM_K562_Methotrexat_30min_R1	1	ATDSFSGRFEDVYQLQEDVLGEGAHAR	27	1	Q9HBH9;Q9HBH9-2	Q9HBH9	MKNK2	MAP kinase-interacting serine/threonine-protein kinase 2	1	AT(0.008)DS(0.052)FS(0.897)GRFEDVY(0.043)QLQEDVLGEGAHAR	105.71	3.3297e-11	4334600.0	4270.6	3620.9	4145.5	4389.4	3142.2	3217.1	3126.0	3600.0	3882.2	4738.8	True	False	4082.869537472055	4219.19218022344	3275.4162016094238	4004.588116983144	3555.454376258855	3838.7590441013376	3827.0850743806027	3473.385959500576	3701.7173693620034	3880.557400089137	1.052134813771411	1.0872644687916546	0.844058176161545	1.0319620879441593	0.9162225963149484	0.989228775230373	0.9862204523228271	0.8950739807175103	0.9539138293063193	1.0	11.922048179493897	-6.7255845144820565	24.999904081302358	0.9524551952556592	1.069699869323109	0.44104535519709065	0.05296109389676683	149.63126370488635	104328.89871174148	0.012554314813153057	0.033213174049555115	1.881115602140423e-07	6.7255845144820565	0.11724467406744976	
ATEPPS(ph)PDAGELSLASR	ddPTM_K562_Methotrexat_30min_R1	2	ATEPPSPDAGELSLASR	17	0	Q8IYB8	Q8IYB8	SUPV3L1	ATP-dependent RNA helicase SUPV3L1, mitochondrial	1	AT(0.005)EPPS(0.995)PDAGELSLASR;ATEPPS(1)PDAGELSLASR	234.82	1.6826e-51	114760000.0	4820.5	4358.2	5861.799999999999	5176.200000000001	4336.2	4354.9	4029.2	4251.1	4468.6	5608.4	True	False	4608.596591903724	5078.3184732662585	4631.488286236669	4722.410582568948	4906.486304606212	5196.42279107175	4932.8506659290915	4101.586403453584	4260.855761354658	4592.66441349285	1.0034690491132048	1.1057456012563422	1.0084534529955549	1.028250740179255	1.0683311173773944	1.1314614618488366	1.0740716546666906	0.893073395783824	0.9277524717104592	1.0	12.165115654182705	-9.253937101254044	24.88570497552132	0.932809698757918	1.0615996810443695	0.5936624732912271	0.045238618842263593	342.9583730090383	1137627.1239241639	0.02210514976014333	0.01243715689253023	5.572664518289897e-10	9.253937101254044	0.12878998228645155	
ATGDGSS(ph)PELPSLER	ddPTM_K562_Methotrexat_30min_R1	1	ATGDGSSPELPSLER	15	0	H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99	H3BSS6	ZNF106	Zinc finger protein 106	1	ATGDGS(0.118)S(0.882)PELPSLER	157.2	1.9334e-08	19844000.0	1363.3	1149.6	2009.1	1555.7	1244.8	1322.7	1264.2	1254.1	1453.7	1835.0	True	False	1303.3709643693287	1339.551860141089	1587.4173659759972	1419.3141963800697	1408.5130187661573	1578.293055121954	1547.7290310402943	1209.9925921693532	1386.1178042969307	1502.6637184864453	0.8673736833695208	0.891451522826644	1.056402271810302	0.9445321524164241	0.9373441319158746	1.050330180801654	1.0299902845855897	0.8052317875806009	0.9224404550694115	1.0	10.55330646893033														
ATGEPGTFVCTSHLPAAASAS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	ATGEPGTFVCTSHLPAAASASPK	23	0	Q8IY33-2;Q8IY33;Q8IY33-4	Q8IY33-2	MICALL2	MICAL-like protein 2	1	ATGEPGTFVCTSHLPAAAS(0.345)AS(0.655)PK	90.744	0.00015606	13324000.0	2356.9	1708.2	3007.4	2451.0	1906.8	1687.0	1767.0	2310.8	2198.8	2961.3	True	False	2253.293498072375	1990.4510155645503	2376.187838552693	2236.124635422992	2157.577622255228	2012.9888742653204	2163.2947301441222	2229.5278542260926	2096.5782679287977	2424.9798744163013	0.9292009067146375	0.8208113545864609	0.9798794058547176	0.9221209045956444	0.8897301148837626	0.8301053940704773	0.8920877047133567	0.9194005598758817	0.8645755332024969	1.0	11.243757058683386	-12.464762186631859	4.536355294955587	1.0003954134584756	0.8940550315903258	0.3307762216327299	0.045140838774349136	0.00018055056158332636	2.1302886100034067e-05	0.043714374166009436	0.010563048098793843	3.4295553262067476e-13	12.464762186631859	-0.10634038186814976	
ATIS(ph)DEEIER	ddPTM_K562_Methotrexat_30min_R1	1	ATISDEEIER	10	0	C9J0A7;Q9UQN3-2;Q9UQN3	C9J0A7	CHMP2B	Charged multivesicular body protein 2b	1	AT(0.019)IS(0.981)DEEIER	160.22	8.9339e-07	148520000.0	1526.2	1388.2	1653.6	1742.7	1535.2	1377.8	1264.1	1491.7	1368.9	1446.2	True	False	1459.1100754202798	1617.5764546345335	1306.531957781051	1589.9201967163	1737.105708876771	1644.040350303946	1547.6066034947296	1439.2360654963913	1305.2601377877606	1184.279166035476	1.232065983483299	1.3658742811879185	1.103229707362692	1.3425214614209238	1.4668042457353627	1.3882202756361735	1.306792053663781	1.21528445891218	1.102155788281984	1.0	10.209793487235057	-9.746839617317468	1.7267794737800326	1.0057302643055799	1.318781383553171	0.5758323174849971	0.09180411448612306	0.26376713092992565	1.5291689372316133	0.0921691888920754	0.02753833721108413	1.7912672375346533e-10	9.746839617317468	0.3130511192475911	
ATLLNVPDLSDSIHS(ph)ANASERDDIS(ph)EIQSLASDHSGR	ddPTM_K562_Methotrexat_30min_R1	1	ATLLNVPDLSDSIHSANASERDDISEIQSLASDHSGR	37	1	G3V1L9;Q07157;A0A087X0K9;G5E9E7;Q07157-2;H0YKB1	G3V1L9	TJP1	Tight junction protein ZO-1	2	AT(0.001)LLNVPDLS(0.194)DS(0.195)IHS(0.529)ANAS(0.381)ERDDIS(0.438)EIQS(0.144)LAS(0.115)DHS(0.004)GR	44.81399999999999	0.013824000000000001	17794000.0	352.19	315.03	527.01	459.14	193.32	232.92	216.06	378.44	476.64	490.05	True	False	336.70814930039893	367.0833529055734	416.3978030177743	418.8879090608374	218.74496849925578	277.9284935351974	264.5169549490319	365.130050698166	454.4811104355021	401.2971963184102	0.8390493439511525	0.9147418827574122	1.037629484675947	1.0438346265655685	0.5450946842043024	0.6925752187779413	0.6591547545703517	0.9098744124004611	1.1325299917492895	1.0	8.648527266471612	-12.305838551263424	11.295156039472722	1.00000000206877	0.856657595969079	0.04921962627567411	0.17703371299080367	1.0054021863363936e-08	6.153734815661335e-10	0.18658249922803646	0.04525290205963188	4.944944808754121e-13	12.305838551263424	-0.14334240609969107	
ATLLNVPDLSDSIHSANASERDDIS(ph)EIQSLASDHSGR	ddPTM_K562_Methotrexat_30min_R1	1	ATLLNVPDLSDSIHSANASERDDISEIQSLASDHSGR	37	1	G3V1L9;Q07157;A0A087X0K9;G5E9E7;Q07157-2;H0YKB1	G3V1L9	TJP1	Tight junction protein ZO-1	1	ATLLNVPDLS(0.001)DS(0.004)IHS(0.035)ANAS(0.094)ERDDIS(0.359)EIQS(0.359)LAS(0.109)DHS(0.04)GR	50.166000000000004	0.0022828	18519000.0	1069.8	1090.3	1509.7	1350.9	1218.0	1105.7	967.73	1361.5	1506.1	1573.2	True	False	1022.7728729423509	1270.4535430687445	1192.8346012711972	1232.4686944075559	1378.1883490176576	1319.3608762745482	1184.7680867019646	1313.615273294454	1436.0817397342	1288.2782353803134	0.7939068167525298	0.9861639420568905	0.925913803798028	0.9566789693095437	1.069790912528148	1.0241272731624305	0.9196523345379723	1.0196673647185082	1.1147294895580173	1.0	10.331228497255303	-5.112650586113714	0.6960425660564185	1.01725155409283	1.2402107795110005e-15	0.5624850562022606	0.05608821509815711	10.419493240640783	1.1364015929140612	0.0232804115267167	12.031342160833898	7.715239530370056e-06	5.112650586113714	-1.0172515540928286	
ATLTAS(ph)PLGAS	ddPTM_K562_Methotrexat_30min_R1	2	ATLTASPLGAS	11	0	Q13111;Q13111-3	Q13111	CHAF1A	Chromatin assembly factor 1 subunit A	1	ATLT(0.009)AS(0.719)PLGAS(0.272);AT(0.001)LT(0.003)AS(0.971)PLGAS(0.025)	80.706	0.03057	13582800.0	6382.799999999999	5248.9	7280.3	6681.2	5578.9	5781.1	5235.4	6560.299999999999	6474.1	7423.9	True	False	6102.219754548922	6116.19150895491	5752.264521186126	6095.469569232191	6312.6231365637195	6898.21575638129	6409.5717205413375	6329.570530586559	6173.120504092151	6079.359770938163	1.0037602616841397	1.0060584896114912	0.9461957735556816	1.0026499169157648	1.0383697254998219	1.134694444200785	1.0543168955358957	1.0411574193790119	1.015422797249507	1.0	12.569703683342988	-7.754968298295262	3.7495657883893863	1.0550090601307178	0.9861625951180119	0.3686021542711644	0.0368982708436683	0.22614537382892658	6.88213790945124	0.011963732744165173	0.014817116642556579	1.7580519398106967e-08	7.754968298295262	-0.06884646501270597	
ATMAQNENVVVQPVVAENIPVIPLSDS(ph)PPPSR	ddPTM_K562_Methotrexat_30min_R1	1	ATMAQNENVVVQPVVAENIPVIPLSDSPPPSR	32	0	A0A087WYW3;P30414	A0A087WYW3	NKTR	NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase	1	ATMAQNENVVVQPVVAENIPVIPLS(0.02)DS(0.746)PPPS(0.234)R	92.611	3.6222000000000002e-06	101460000.0	1835.8	1427.0	1961.6	1636.7	1612.8	1454.6	1595.0	1936.5	1847.4	2008.9	True	False	1755.1004301248543	1662.7874951472972	1549.8869668500906	1493.2130521406814	1824.9114690440706	1735.680863370678	1952.7193517712928	1868.3921973813513	1761.5147772292435	1645.0687433609917	1.0668857682743762	1.0107708275765455	0.9421411555626314	0.9076903674492907	1.1093223164131412	1.0550810538315618	1.1870138312771958	1.1357532655833542	1.0707849044838966	1.0	10.683932156545895	-7.782877514098753	24.98427819671899	1.1025857538432027	0.9810983102261174	0.43866764945271686	0.06100142364054663	210.15040416898816	244910.55884471262	0.019498415680325214	0.02212930645699134	1.6486272952603676e-08	7.782877514098753	-0.1214874436170853	
ATMAQNENVVVQPVVAENIPVIPLSDSPPPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	ATMAQNENVVVQPVVAENIPVIPLSDSPPPSR	32	0	A0A087WYW3;P30414	A0A087WYW3	NKTR	NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase	1	ATMAQNENVVVQPVVAENIPVIPLS(0.044)DS(0.174)PPPS(0.782)R	94.428	1.8068e-06	49018000.0	865.15	976.27	927.36	939.18	758.4	586.01	726.7	1085.1	1119.3	1122.5	True	False	827.1190419013603	1137.5820237473383	732.719809124235	856.8435475710186	858.1428931814379	699.2481388311913	889.6809736252031	1046.9364179594656	1067.263987307942	919.2043727526079	0.8998206127158719	1.2375724675251343	0.7971239376615076	0.9321578236243084	0.9335713782688848	0.7607101962942739	0.9678815723656804	1.1389593533202602	1.1610736621192972	1.0	9.844241850828265	-9.180128600382549	5.139398766032551	1.1119975374878093	0.9307781464350712	0.27242388696275754	0.12572939409248107	0.2862144665883766	13.083827619561916	0.06246540244180038	0.0350605085808825	6.60497836837653e-10	9.180128600382549	-0.1812193910527381	
ATNES(ph)EDEIPQLVPIGK	ddPTM_K562_Methotrexat_30min_R1	8	ATNESEDEIPQLVPIGK	17	0	O76021;O76021-2;J3QSV6	O76021	RSL1D1	Ribosomal L1 domain-containing protein 1	1	AT(0.005)NES(0.995)EDEIPQLVPIGK;AT(0.021)NES(0.979)EDEIPQLVPIGK;AT(0.013)NES(0.987)EDEIPQLVPIGK;AT(0.021)NES(0.979)EDEIPQLVPIGK;AT(0.02)NES(0.98)EDEIPQLVPIGK;AT(0.199)NES(0.801)EDEIPQLVPIGK;AT(0.003)NES(0.997)EDEIPQLVPIGK;AT(0.285)NES(0.715)EDEIPQLVPIGK	193.41	1.2873e-11	3970681000.0	52583.200000000004	38102.85	72159.0	55945.50000000001	36810.17	35394.93	34495.39	45558.17	49892.200000000004	61457.5	True	False	50271.705489345884	44398.698324788515	57013.81201108055	51040.84487599225	41651.35256105031	42234.49928595125	42231.85931028086	43955.863338483425	47572.7225118961	50326.95121464889	0.9989022636188037	0.8822052052273969	1.1328683863227003	1.0141851164060889	0.8276152549635605	0.8392024207033202	0.8391499642042342	0.8734060434340197	0.9452732852620902	1.0	15.619043582177971	-7.74998468555995	24.97462665259122	0.8762849676973535	1.0071112152610575	0.3718498377625816	0.07531916467752962	221.32379144714204	482549.16081746353	0.022492381253673924	0.028779725780609597	1.778342118258162e-08	7.74998468555995	0.13082624756370398	
ATNES(ph)EDEIPQLVPIGKK	ddPTM_K562_Methotrexat_30min_R1	4	ATNESEDEIPQLVPIGKK	18	1	O76021;O76021-2;J3QSV6	O76021	RSL1D1	Ribosomal L1 domain-containing protein 1	1	AT(0.019)NES(0.981)EDEIPQLVPIGKK;AT(0.203)NES(0.797)EDEIPQLVPIGKK;AT(0.052)NES(0.948)EDEIPQLVPIGKK;AT(0.079)NES(0.921)EDEIPQLVPIGKK	138.66	7.4902e-09	576544000.0	18690.7	11995.199999999999	30359.8	21083.2	11260.600000000002	9649.900000000001	10478.3	14631.400000000001	14524.399999999998	23929.7	True	False	17869.079207612256	13977.202916461709	23987.692871215	19234.868589779693	12741.566274998557	11514.606602117909	12828.3255070001	14116.805368843532	13849.163814219122	19595.799446466004	0.9118831439579184	0.7132754626646488	1.2241242280901712	0.9815812129700376	0.6502192630521348	0.5876058608159773	0.6546467033430279	0.7203995635600068	0.7067414550783608	1.0	14.258256811072117	-7.758320285944142	24.992224335544755	0.6960745196880523	0.9592851728537292	0.35334474933379756	0.15558445073518018	84.62285432860709	678048.1307454683	0.0468565165153461	0.05793274285682057	1.744535108798513e-08	7.758320285944142	0.2632106531656768	
ATPELGSSENSAS(ph)SPPR	ddPTM_K562_Methotrexat_30min_R1	1	ATPELGSSENSASSPPR	17	0	Q9BX63	Q9BX63	BRIP1	Fanconi anemia group J protein	1	ATPELGSS(0.001)ENS(0.023)AS(0.669)S(0.306)PPR	138.28	1.3902e-06	14466000.0	930.47	707.44	1007.4	1119.0	949.78	719.96	862.97	1105.7	949.86	902.18	True	False	889.5676529133196	824.3324355760367	795.960506935553	1020.8990073595786	1074.6927176765107	859.0820805667212	1056.5129899674441	1066.8119042832736	905.7012159245259	738.7864596970578	1.2040930653738433	1.115792560564872	1.0773891379410765	1.3818593911130994	1.454673002693082	1.1628286757163782	1.4300654486827917	1.4440057614492878	1.2259309899858102	1.0	9.529013614964976	-7.260736966833082	24.999465804061902	1.3245692809124188	1.1307616800882412	0.2186278925240388	0.139745701439438	79.2419347112489	2820237.5397119476	0.036984914065536674	0.05947111888282266	5.486091328705441e-08	7.260736966833082	-0.19380760082417758	
ATPELGSSENSASS(ph)PPR	ddPTM_K562_Methotrexat_30min_R1	1	ATPELGSSENSASSPPR	17	0	Q9BX63	Q9BX63	BRIP1	Fanconi anemia group J protein	1	ATPELGS(0.001)SENS(0.005)AS(0.085)S(0.908)PPR	156.06	7.1934e-11	13108000.0	1659.4	1566.7	2068.4	1679.4	1785.7	1511.1	1500.5	1809.0	1762.0	2127.4	True	False	1586.4547629094577	1825.570545653309	1634.271106358446	1532.169609436708	2020.5508496230152	1803.0986887387812	1837.0253212118039	1745.3764446490384	1680.0850045891127	1742.1072450725146	0.9106527553895926	1.0479093929589394	0.9381001720651361	0.8794921287253655	1.1598314944949961	1.0350101544200443	1.0544846342885958	1.001876577682442	0.9643981501949266	1.0	10.766617724426531	-6.246349383048151	23.36556344155568	1.0097532256174198	0.9106525755576834	0.1459176033461267	0.07136845044587026	2255.2436705622076	3491907.4083290566	0.018447318952024297	0.37206997310471573	5.670882083483255e-07	6.246349383048151	-0.09910065005973634	
ATPGAPALTSMT(ph)PTAVER	ddPTM_K562_Methotrexat_30min_R1	6	ATPGAPALTSMTPTAVER	18	0	P54198-2;P54198	P54198-2	HIRA	Protein HIRA	1	ATPGAPALT(0.004)S(0.004)MT(0.93)PT(0.063)AVER;ATPGAPALT(0.057)S(0.057)MT(0.874)PT(0.011)AVER;ATPGAPALT(0.061)S(0.042)MT(0.889)PT(0.008)AVER;ATPGAPALT(0.008)S(0.008)MT(0.975)PT(0.009)AVER;ATPGAPALT(0.086)S(0.276)MT(0.607)PT(0.032)AVER;ATPGAPALT(0.006)S(0.024)MT(0.921)PT(0.049)AVER	140.75	1.6205000000000002e-08	200335000.0	10972.4	9825.54	8918.0	12172.4	9378.199999999999	9564.4	9734.8	11443.699999999999	12076.399999999998	12642.5	True	False	10490.066433980797	11449.04347937602	7046.2336716808195	11105.264590870185	10611.597680424788	11412.584937180334	11918.076705719865	11041.218584649096	11514.970799897808	10352.820741670243	1.0132568404046773	1.1058863825675513	0.6806100334877464	1.0726800809146966	1.024995790539767	1.1023647778662415	1.1511912553213102	1.0664937469851132	1.1122544364696567	1.0	13.337736279214402	-7.475257887233547	24.99995855961986	1.0813470185968679	0.938203010316891	0.2670070044454995	0.10788585754395282	538.8476491965877	282883.51459406916	0.030279087921307436	0.04490985056714145	3.34766593278839e-08	7.475257887233547	-0.14314400827997686	
ATQAS(ph)QEY	ddPTM_K562_Methotrexat_30min_R1	1	ATQASQEY	8	0	P16104	P16104	H2AFX	Histone H2AX	1	ATQAS(0.961)QEY(0.039)	83.869	0.017317	11427000.0	3192.0	2553.0	4082.6	3276.2	3075.8	3133.6	2648.7	3154.3	2964.8	3418.9	True	False	3051.68350199288	2974.8398564197987	3225.7180520300653	2988.980632628646	3480.32161240436	3739.1238508582105	3242.738399396005	3043.3614811257403	2826.9670951224753	2799.704080181639	1.0900021625838732	1.0625551026902806	1.1521639286323389	1.0676059137059684	1.2431033826184104	1.3355425229853664	1.1582432666189575	1.087029698127344	1.0097378201981502	1.0	11.451058631612398	-9.55758989498634	2.6921050116160443	1.0030451441742574	1.1604622579374082	0.3834609624005667	0.07800645763818005	0.33894750952357505	4.682943061987965	0.07249995189253466	0.02389482142051917	2.769555707123419e-10	9.55758989498634	0.15741711376315082	
ATS(ph)DEEDSVLSIAR	ddPTM_K562_Methotrexat_30min_R1	1	ATSDEEDSVLSIAR	14	0	A6QL64	A6QL64	ANKRD36	Ankyrin repeat domain-containing protein 36A	1	AT(0.323)S(0.677)DEEDSVLSIAR	150.9	3.2999e-09	3349500.0	656.66	567.27	678.01	668.08	641.47	665.48	460.88	688.76	662.88	730.59	True	False	627.794012662483	661.0017255586595	535.7049665548682	609.5104636611152	725.8345486406872	794.0745916100091	564.2440720027295	664.5359204071156	632.062853485829	598.2730714381535	1.0493435901324557	1.104849536299062	0.8954188181445615	1.0187830486770009	1.2132161437517088	1.3272778427101521	0.9431212918314648	1.1107568636002232	1.0564788616784142	1.0	9.22466031782368	-6.195279621386807	18.7300934108495	1.0786962609712794	1.0493372466814255	0.002793913003598658	0.11993655800182032	35276.88883668284	9977921.348208398	0.03153109430205647	38.79685738971142	6.378526712110802e-07	6.195279621386807	-0.02935901428985388	
ATS(ph)LPSLDTPGELR	ddPTM_K562_Methotrexat_30min_R1	2	ATSLPSLDTPGELR	14	0	D6RAM3;Q7L591	D6RAM3	DOK3	Docking protein 3	1	AT(0.007)S(0.944)LPS(0.048)LDTPGELR;AT(0.012)S(0.831)LPS(0.156)LDT(0.001)PGELR	175.88	0.00018117	130038000.0	2785.8	2594.5	3354.5	3234.4	2561.5	2596.3	2589.3	2762.0	2987.9	3283.3999999999996	True	False	2663.3395676227346	3023.19702604041	2650.4362919548475	2950.845173729958	2898.3821477904203	3097.9982301452587	3170.0164373300395	2664.8588944834955	2848.9931811644765	2688.7444432034863	0.9905513982018748	1.1243898741222287	0.985752401517566	1.0974807149072872	1.077968624023324	1.1522099982303151	1.1789950678812542	0.9911164674722553	1.0595998397564563	1.0	11.392716922712633	-3.187942952688704	24.293903374182115	1.0717251753506043	0.07045933614068667	0.0	0.06872432159629316	0.0	0.0	0.01567203520453359	0.0	0.0006487196413562463	3.187942952688704	-1.0012658392099176	
ATS(ph)PEAGGGGGALK	ddPTM_K562_Methotrexat_30min_R1	2	ATSPEAGGGGGALK	14	0	Q13233	Q13233	MAP3K1	Mitogen-activated protein kinase kinase kinase 1	1	AT(0.008)S(0.992)PEAGGGGGALK;AT(0.033)S(0.967)PEAGGGGGALK	180.61	6.3262e-14	41134000.0	7740.5	5812.1	10297.599999999999	8499.8	5842.7	5093.1	4665.1	6550.7	6787.8	9328.5	True	False	7400.236888213004	6772.450736191741	8136.274485030327	7754.635730790838	6611.117460431416	6077.269493491819	5711.367428180729	6320.308168027893	6472.236659562984	7639.018254986815	0.9687418777121088	0.8865603550260701	1.0650942586397014	1.015135122334411	0.8654407202281029	0.7955563516980113	0.7476572561470579	0.8273717848366108	0.8472602687312409	1.0	12.899171523751482	-7.88188795094903	4.802009660957252	0.8272425416397715	0.9821438219852415	0.4419969976799849	0.07423138442145044	0.18284876552954257	6.900059607598618	0.023359270632781346	0.02676580732803777	1.3125384935173522e-08	7.88188795094903	0.15490128034547002	
ATS(ph)PLVSLYPALECR	ddPTM_K562_Methotrexat_30min_R1	2	ATSPLVSLYPALECR	15	0	A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3;Q96G74-4	A0A087WXV6	OTUD5	OTU domain-containing protein 5	1	AT(0.06)S(0.94)PLVSLYPALECR;AT(0.068)S(0.929)PLVS(0.002)LY(0.001)PALECR	125.36	0.00046896	194243000.0	5347.9	4674.4	5145.9	4970.9	4552.5	4030.8999999999996	4164.0	5804.5	5542.4	6387.9	True	False	5112.81271939465	5446.765148785235	4065.8459128843197	4535.108914820136	5151.233545897281	4809.81437657147	5097.882997351515	5600.3524449780825	5284.735033731382	5230.989409983411	0.9774083483397579	1.0412495078636583	0.7772613542525244	0.8669696226424818	0.9847531971802668	0.9194846327526256	0.9745542569102011	1.0706105491801872	1.0102744661737217	1.0	12.352868133978344	-8.995246331842953	3.9523974901810157	1.0302685526941529	0.9264414787318197	0.2901975952140674	0.06933604321115215	0.2899990002835045	10.290375304555297	0.034812890129916806	0.021129326771315102	1.0110058490534104e-09	8.995246331842953	-0.10382707396233315	
ATS(ph)PSSSVSGDFDDGHHSVSTPGPSR	ddPTM_K562_Methotrexat_30min_R1	1	ATSPSSSVSGDFDDGHHSVSTPGPSR	26	0	C9JCJ2;C9J053;C9JQF1;C9JPI5;E7EVG2;Q86U86-6;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;Q86U86-8;Q86U86;C9J409	C9JCJ2	PBRM1	Protein polybromo-1	1	AT(0.212)S(0.719)PS(0.013)S(0.013)S(0.041)VS(0.002)GDFDDGHHSVSTPGPSR	117.66	4.2117e-09	83915000.0	610.39	556.58	519.25	512.91	706.02	369.89	519.96	557.89	565.27	540.13	True	False	583.5579864603493	648.5453847575916	410.2665209710995	467.9439766441483	798.8740050685107	441.36600752934146	636.5742659228852	538.268692484938	538.99072108064	442.30722303328804	1.3193498909160495	1.4662780777350817	0.9275600750029417	1.0579614174849927	1.8061518407724204	0.9978720322551102	1.4392129107848113	1.2169565959008268	1.2185890101100059	1.0	8.788904991923609	-10.263461850065136	1.564124243853837	1.0006002523891016	1.2811032873557362	0.10659326554181947	0.2438244909378556	2.3394122627932408	9.63678232249321	0.23025984997773835	0.06649142216053494	5.451777838945687e-11	10.263461850065136	0.28050303496663465	
ATS(ph)SSSGSLSATGR	ddPTM_K562_Methotrexat_30min_R1	1	ATSSSSGSLSATGR	14	0	Q03252	Q03252	LMNB2	Lamin-B2	1	AT(0.001)S(0.436)S(0.436)S(0.123)S(0.004)GS(0.001)LSATGR	97.631	0.0052856000000000005	4622500.0	2143.5	1897.6	2363.9	2849.4	2068.1	2246.9	2071.8	2246.6	2407.0	2741.0	True	False	2049.27430655443	2211.1461463150063	1867.749694604878	2599.5975259788956	2340.091399510194	2681.0816251255155	2536.4538890280674	2167.5858046149983	2295.099095372299	2244.5783391669456	0.9129885425674201	0.9851053570870921	0.8321160647474108	1.158167429764876	1.0425527853836	1.1944700607422658	1.1300358043949799	0.9656984417926253	1.0225079050812296	1.0	11.13222873402553	-7.262594739182265	24.99810159094064	1.07804393206372	0.9175735256740467	0.49136190869888197	0.07590703053920655	91.60481022649992	1982038.571428637	0.021819184488170097	0.03454710612025276	5.4626737137176386e-08	7.262594739182265	-0.16047040638967336	
ATSEVPGSQAS(ph)PNPVPGDGLHR	ddPTM_K562_Methotrexat_30min_R1	3	ATSEVPGSQASPNPVPGDGLHR	22	0	Q96GM8;Q96GM8-2	Q96GM8	TOE1	Target of EGR1 protein 1	1	ATSEVPGSQAS(1)PNPVPGDGLHR;ATSEVPGSQAS(1)PNPVPGDGLHR;AT(0.002)S(0.003)EVPGS(0.032)QAS(0.964)PNPVPGDGLHR	153.83	6.192800000000001e-21	92643000.0	7450.9	6621.400000000001	8955.9	7880.1	7439.6	6964.599999999999	6641.099999999999	7813.7	8083.4	9281.9	True	False	7123.367357455755	7715.473805443816	7076.178979614965	7189.263867644519	8418.037800781418	8310.410381569793	8130.535728556952	7538.88774215268	7707.604498351662	7600.85796655005	0.9371793801179233	1.015079329122866	0.9309710838902531	0.9458489948480975	1.1075115253866896	1.093351621375159	1.0696865754284468	0.9918469435068924	1.014044010856588	1.0	12.891946560353222	-7.742465533584421	24.999845975501927	1.0492103643576087	0.959520456294256	0.5213520665037965	0.04159752986706164	212.85308929245238	280453.0853189998	0.013198971659806378	0.017012398220732756	1.8093995018562954e-08	7.742465533584421	-0.08968990806335275	
ATSILSYLS(ph)DSDLR	ddPTM_K562_Methotrexat_30min_R1	1	ATSILSYLSDSDLR	14	0	A0A499FJE4;Q96MK2;Q96MK2-2	A0A499FJE4	FAM65C	Protein FAM65C	1	ATSILSYLS(1)DSDLR	207.52	3.5493e-14	7284300.0	1499.0	1354.8	1336.9	1471.8	974.89	1117.2	1393.1	1140.9	1248.1	1343.1	True	False	1433.1057548519202	1578.6576723374635	1056.3029598194767	1342.7695791169153	1103.1051228028111	1333.0830885176133	1705.5381372743507	1100.7739003317236	1190.076103420925	1099.851575094902	1.3029992294444483	1.4353370109973675	0.9604050071286503	1.2208643507202803	1.0029581697945273	1.212057261819702	1.550698454132037	1.000838590640507	1.0820333673825377	1.0	10.103093129937093	-15.999946507997095	0.035870247690466116	1.109446797674457e-06	1.8145992215743192	0.1370035690656799	0.17965578769368012	2439.2967143749493	6.543917827661847	281.1539436823852	95.44271782401658	1.0001231774742065e-16	15.999946507997095	1.8145981121275214	
ATSLGRPEEEEDELAHR	ddPTM_K562_Methotrexat_30min_R1	1	ATSLGRPEEEEDELAHR	17	1	D6RER6;P36551-2;P36551	D6RER6	CPOX	Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial	0		95.195	0.009659200000000001	11512000.0	3688.3	3416.1	4487.6	4185.1	3577.2	3554.9	3612.8	4260.9	4085.8	4683.1	False	True	3526.166748245724	3980.552461228228	3545.7140866825357	3818.198780786928	4047.664500908019	4241.834113293293	4423.062366193941	4111.041731898891	3895.8520498014714	3834.945209833174	0.9194829535515366	1.0379685349928085	0.9245801159273355	0.9956332025283422	1.0554686649836382	1.1061003172657633	1.15335738170464	1.0719949065654912	1.0158820626203802	1.0	11.904990250638892	-7.7476551026030815	3.040180575016835	1.0791345374338281	0.9674712242624196	0.47251329933958286	0.05086761387548579	0.21401522297863812	4.0750817022223185	0.016268167423468646	0.020459974275887475	1.7879068874753906e-08	7.7476551026030815	-0.11166331317140854	
ATSLPS(ph)LDTPGELR	ddPTM_K562_Methotrexat_30min_R1	1	ATSLPSLDTPGELR	14	0	D6RAM3;Q7L591	D6RAM3	DOK3	Docking protein 3	1	AT(0.312)S(0.205)LPS(0.48)LDT(0.003)PGELR	150.49	4.625399999999999e-09	61159000.0	2033.6	2104.9	2407.0	2540.7	2033.8	1784.4	1641.8	2144.4	2003.4	2347.6	True	False	1944.2053789638865	2452.698947817481	1901.803593601226	2317.9607756912264	2301.280348302226	2129.210045784845	2010.0154430959926	2068.9802365425103	1910.2623712791292	1922.426891290887	1.011328642858494	1.275834706083685	0.9892722590476184	1.2057471658309686	1.197070410702039	1.1075635986110794	1.04556144746097	1.076233507716496	0.9936723107303241	1.0	10.908713019089706	-8.72033448015366	2.8778557754257403	1.0317199426801726	1.1403602426622508	0.26853821770438246	0.08361518415792954	0.3599370164228958	6.086347084278126	0.0350717953084694	0.024515077585841104	1.9039937561343856e-09	8.72033448015366	0.10864029998207814	
ATSPSKS(ph)VAHGQAPEMPLVK	ddPTM_K562_Methotrexat_30min_R1	1	ATSPSKSVAHGQAPEMPLVK	20	1	H3BMC9;Q1ED39	H3BMC9	KNOP1	Lysine-rich nucleolar protein 1	1	AT(0.059)S(0.153)PS(0.153)KS(0.634)VAHGQAPEMPLVK	47.68	0.032617	9366800.0	1946.1	1484.0	2961.9	2682.6	1521.0	1443.0	1440.7	2009.5	1406.6	2580.8	True	False	1860.551774194345	1729.2057763129565	2340.237666758403	2447.4206230051896	1721.0381599801792	1721.8393275428898	1763.8136489635767	1938.8247460045575	1341.2074730164838	2113.3921115366866	0.8803627892987181	0.8182134147626864	1.107337182713705	1.1580532593289679	0.8143487195704447	0.814727810397148	0.8345889242867832	0.917399443019025	0.6346231093108733	1.0	11.045344749468036	-7.847169994837507	24.99999690269743	0.8306871203922261	0.9870044465790248	0.2657485441741043	0.12600203704353652	33.74079294162364	9833.745260709198	0.04032439739724537	0.045723582953018045	1.421772157356748e-08	7.847169994837507	0.1563173261867986	
ATSSS(ph)SGSLSATGR	ddPTM_K562_Methotrexat_30min_R1	1	ATSSSSGSLSATGR	14	0	Q03252	Q03252	LMNB2	Lamin-B2	1	AT(0.027)S(0.019)S(0.191)S(0.608)S(0.13)GS(0.025)LSATGR	94.781	0.0081756	45100000.0	970.44	795.33	903.37	901.59	808.35	809.57	685.66	673.88	797.54	991.0	True	False	927.780619572046	926.7447642014715	713.764982281487	822.5490045087786	914.6621937014974	966.0079448363804	839.4367089250821	650.1792584411802	760.4625394778665	811.5202970136605	1.1432623718546728	1.14198593382301	0.8795405178503773	1.0135901807209295	1.1270971250717845	1.1903681872052048	1.0344001401001948	0.8011866873001151	0.9370838194390416	1.0	9.664483368386243	-9.06837544985529	7.42932137310019	0.9036684957471748	1.0780376205200972	0.39513152740449664	0.09372618568657207	0.30236353158386264	29.001894135025104	0.04704273763669496	0.027171641979402455	8.543278226641327e-10	9.06837544985529	0.17436912477292243	
ATSSSSGS(ph)LSATGR	ddPTM_K562_Methotrexat_30min_R1	2	ATSSSSGSLSATGR	14	0	Q03252	Q03252	LMNB2	Lamin-B2	1	ATS(0.002)S(0.044)S(0.027)S(0.103)GS(0.654)LS(0.17)ATGR;ATSSS(0.021)S(0.073)GS(0.778)LS(0.128)ATGR	190.57	3.1834e-06	32974000.0	2490.0	2437.7	2248.1	2685.0	2137.3999999999996	2139.56	2229.1	2681.2	2651.4	3270.6000000000004	True	False	2380.5425814418154	2840.4884911847	1776.254532104246	2449.6102187314286	2418.505564195682	2552.99968928459	2729.032418202753	2586.900676281372	2528.1369927171227	2678.2626472380225	0.8888383609041357	1.0605712976335513	0.6632114792535456	0.9146265849832191	0.9030128418098886	0.9532297707685202	1.0189562330703776	0.9658875984209883	0.9439466272377289	1.0	11.387081731988822	-8.24010573658728	2.3725995096741257	0.9799241406508986	0.8811047496372972	0.20140664692097	0.09187740843263245	0.5329943903791045	5.907709180946033	0.03554383780443627	0.033301738840098016	5.752998534737917e-09	8.24010573658728	-0.09881939101360138	
ATSSSSGSLS(ph)ATGR	ddPTM_K562_Methotrexat_30min_R1	1	ATSSSSGSLSATGR	14	0	Q03252	Q03252	LMNB2	Lamin-B2	1	ATSSS(0.001)S(0.003)GS(0.024)LS(0.969)AT(0.003)GR	113.25	0.0038538000000000005	0.0	956.25	674.41	1211.7	1274.9	810.42	717.16	960.87	768.64	1051.1	954.62	True	False	914.2143949814201	785.8447894900412	957.3807288602435	1163.131496409944	917.0044349843103	855.7410201944972	1176.3695570761647	741.6064955307007	1002.2345904220296	781.7290675430687	1.169477294550074	1.0052648956241426	1.2246963412390923	1.4878959280171096	1.173046357181529	1.0946772426974527	1.5048302614273117	0.9486745809024717	1.2820740996263547	1.0	9.61052487321685	-12.501434297278411	5.919594509554045	0.9997660383212154	1.2091469591436974	0.1182546885176825	0.1720708462772752	0.0005253711057380454	4.424808532555435e-05	0.16474536878611165	0.039912381031011884	3.1518511754324673e-13	12.501434297278411	0.20938092082248205	
ATSTS(ph)PNSQSSK	ddPTM_K562_Methotrexat_30min_R1	3	ATSTSPNSQSSK	12	0	E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424	E7EPN9	PRRC2C	Protein PRRC2C	1	ATST(0.07)S(0.924)PNS(0.006)QSSK;ATST(0.025)S(0.926)PNS(0.04)QS(0.004)S(0.004)K;ATS(0.008)T(0.08)S(0.899)PNS(0.013)QSSK	195.71	8.7398e-31	10989900.0	7287.2	5914.799999999999	10646.400000000001	9270.4	5899.1	6232.200000000001	5863.1	7525.3	7115.0	9089.099999999999	True	False	6966.863413446905	6892.120165590214	8411.866131664354	8457.678425224529	6674.9350490066245	7436.484447063622	7178.0494240566	7260.630933619355	6784.225202980435	7442.975914820242	0.9360319707033694	0.9259898519712821	1.1301751111292575	1.1363302154967128	0.8968099756598277	0.9991278397470433	0.9644058379611135	0.9755010652610326	0.9114936391869654	1.0	12.861663852116259	-7.784806238679077	24.998657271404507	0.9590525188634115	1.0315534363104473	0.20684005744489986	0.07119718560186519	424.6649097201885	454318.48465580936	0.023924697690860267	0.027144245636968222	1.641321888797055e-08	7.784806238679077	0.0725009174470358	
ATSVALPGWS(ph)PSETR	ddPTM_K562_Methotrexat_30min_R1	1	ATSVALPGWSPSETR	15	0	Q16513-4;Q16513-3;Q16513-2;Q16513;Q16513-5;B1AL79	Q16513-4	PKN2	Serine/threonine-protein kinase N2	1	ATS(0.002)VALPGWS(0.96)PS(0.019)ET(0.019)R	100.4	0.0030824999999999997	12276000.0	1374.2	1225.4	1685.2	1737.4	1348.9	1555.9	1441.5	1614.9	1626.3	1829.7	True	False	1313.7918134206195	1427.8765217613864	1331.499549620601	1585.0848394875186	1526.3039934235787	1856.5556546943753	1764.7930693280996	1558.1030516659669	1550.6936679700755	1498.3235998444952	0.8768411667259146	0.9529827347774404	0.8886595323992706	1.0579055416680536	1.0186744663048672	1.23908857531648	1.1778450726607124	1.0398975573952622	1.0349524416027456	1.0	10.549133527599437	-7.441487783822386	1.9418013075830756	1.1017503707168572	0.9065133953578282	0.5360048765430349	0.07363426640857355	0.2670496562081229	1.9926757211595645	0.02470749968475491	0.04182603796308093	3.618363686079558e-08	7.441487783822386	-0.19523697535902906	
ATSVALPGWSPS(ph)ETR	ddPTM_K562_Methotrexat_30min_R1	1	ATSVALPGWSPSETR	15	0	Q16513-4;Q16513-3;Q16513-2;Q16513;Q16513-5;B1AL79	Q16513-4	PKN2	Serine/threonine-protein kinase N2	1	ATSVALPGWS(0.066)PS(0.929)ET(0.005)R	183.76	8.4886e-06	28640000.0	2881.3	2397.1	3003.5	2733.6	2740.3	2708.3	2635.1	2899.1	2709.8	2948.3	True	False	2754.6415019712053	2793.1800312667056	2373.10639525604	2493.9495321877976	3100.697481784145	3231.640645034241	3226.0882531990833	2797.1370097744757	2583.821989464005	2414.334300388875	1.140952809032087	1.1569151922402834	0.9829236965542864	1.0329760596062025	1.2842867208922635	1.3385224426102562	1.3362226816226153	1.158554144438052	1.0702005886458354	1.0	11.237409737110163	-7.756482443379393	24.9947068599507	1.2198329523316318	1.0772244310767072	0.19763240050170572	0.112925648011372	181.04647335013692	912897.4289829781	0.03549784211418934	0.044374771199903955	1.7519332557526648e-08	7.756482443379393	-0.14260852125492463	
ATVPVAAATAAEGEGS(ph)PPAVAAVAGPPAAAEVGGGVGGSSR	ddPTM_K562_Methotrexat_30min_R1	2	ATVPVAAATAAEGEGSPPAVAAVAGPPAAAEVGGGVGGSSR	41	0	O75179-4;O75179-6;O75179-2;O75179;H0YLQ3;A0A1W2PQ15;O75179-5;O75179-3	O75179-4	ANKRD17	Ankyrin repeat domain-containing protein 17	1	ATVPVAAATAAEGEGS(1)PPAVAAVAGPPAAAEVGGGVGGSSR;ATVPVAAAT(0.001)AAEGEGS(0.999)PPAVAAVAGPPAAAEVGGGVGGSSR	128.7	3.9746e-42	66907000.0	2884.7799999999997	2315.16	2778.92	3057.94	2254.44	2433.06	2468.2799999999997	2626.08	2776.58	2902.79	True	False	2757.9685253380385	2697.7008390085607	2195.6626681887496	2789.8551479581324	2550.938375664507	2903.2144104445615	3021.854621686551	2533.7192779236852	2647.497401839974	2377.066602389792	1.160240324173208	1.1348865178183976	0.9236858008022715	1.173654598130882	1.0731455202390678	1.2213433176528605	1.2712536614028902	1.0659016770402654	1.1137666059412485	1.0	11.21496661099306	-6.5252646482198315	24.99647651319517	1.113070840202434	1.1539019472070173	0.027783139061532514	0.0963983684063444	327.6416524946846	3432646.445769234	0.02540957302733204	0.06820776389529255	2.983563955427964e-07	6.5252646482198315	0.040831107004583256	
ATVT(ph)PS(ph)PVKGK	ddPTM_K562_Methotrexat_30min_R1	2	ATVTPSPVKGK	11	1	Q9H1E3;Q9H1E3-2	Q9H1E3	NUCKS1	Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1	2	AT(0.17)VT(0.841)PS(0.989)PVKGK;AT(0.02)VT(0.98)PS(1)PVKGK	120.03	0.0081777	24763500.0	12605.5	7822.2	19953.0	13247.099999999999	7457.0	7054.8	5775.7	10945.2	10520.0	16166.2	True	False	12051.377313399518	9114.685595333698	15765.137973878382	12085.747310449586	8437.726205767378	8418.040254989315	7071.047749232263	10560.251112201584	10030.927496184702	13238.34452631912	0.9103386975191803	0.6885064501239422	1.190869292042955	0.9129349433701428	0.6373701930020295	0.6358831527804273	0.5341338363852316	0.7977017890119701	0.7577176644891088	1.0	13.69243510192144	-7.741631435929092	16.36033584926734	0.7028087727512734	0.9276762433370551	0.2559978015346146	0.16264853057047296	5.937052876835261	4901.091813985827	0.048079205587475395	0.06167248040731277	1.8128779390891258e-08	7.741631435929092	0.22486747058578171	
ATVTPS(ph)PVK	ddPTM_K562_Methotrexat_30min_R1	2	ATVTPSPVK	9	0	Q9H1E3;Q9H1E3-2	Q9H1E3	NUCKS1	Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1	1	AT(0.294)VT(0.294)PS(0.413)PVK;ATVT(0.211)PS(0.789)PVK	85.963	0.019906	151519000.0	22343.8	15165.900000000001	29086.0	20113.1	18247.9	14725.2	13841.2	21687.2	23258.1	25882.0	True	False	21361.59330571069	17671.80719877675	22981.246083708043	18349.81575060227	20647.818697897645	17570.63649752916	16945.441436825608	20924.44888357801	22176.836007510803	21194.518998292206	1.0078829015856385	0.8337913778652252	1.0843013745940546	0.8657811839032934	0.9742055811486634	0.8290179408622085	0.7995199814721449	0.9872575492401617	1.0463476906127358	1.0	14.371403604887833	-9.508513465671632	23.89693766299379	1.0210501611864222	0.912763424200873	0.22585663788193133	0.08462416595842229	531.9011330358611	884841.6780332773	0.04841065380032878	0.021797659851216466	3.100891241258315e-10	9.508513465671632	-0.10828673698554925	
ATVTPS(ph)PVKGK	ddPTM_K562_Methotrexat_30min_R1	1	ATVTPSPVKGK	11	1	Q9H1E3;Q9H1E3-2	Q9H1E3	NUCKS1	Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1	1	ATVT(0.031)PS(0.969)PVKGK	92.65	0.010152	730460000.0	7397.7	4999.6	12272.0	8185.1	5110.6	4112.3	3763.0	6129.4	5675.3	8521.8	True	False	7072.505965755873	5825.698921330366	9696.274906802764	7467.524991187572	5782.733478234515	4906.943774535431	4606.9485396334685	5913.825527823009	5411.456541739263	6978.419442069643	1.0134824976439545	0.8348163892542685	1.3894657647473059	1.0700882991024212	0.8286594874726368	0.7031597649395722	0.660170770455602	0.8474448371749206	0.7754559018215658	1.0	12.768684598847813	-7.795433308686355	4.617566702598858	0.7789474624355921	1.0837976219535297	0.43396345019830096	0.1530359483366193	0.18314730916112337	8.939259195016579	0.048734953068906246	0.05781273922939683	1.6016465821933364e-08	7.795433308686355	0.3048501595179376	
AVAEEDNGS(ph)IGEETDSSPGR	ddPTM_K562_Methotrexat_30min_R1	2	AVAEEDNGSIGEETDSSPGR	20	0	E9PNJ4;Q13586;G0XQ39	E9PNJ4	STIM1	Stromal interaction molecule 1	1	AVAEEDNGS(0.959)IGEET(0.033)DS(0.008)SPGR;AVAEEDNGS(1)IGEETDSSPGR	241.38	3.0757999999999985e-248	9935100.0	1677.3899999999999	1369.29	2156.7	1770.8200000000002	1338.1399999999999	1581.1799999999998	1592.38	1969.06	1769.37	2051.33	True	False	1603.6539440500746	1595.5418985495749	1704.0381430493417	1615.5749599754151	1514.1288648230602	1886.720656912173	1949.5117500774759	1899.8070437261672	1687.1123748977504	1679.8142592058864	0.9546614664458106	0.9498323340247449	1.0144205728167273	0.9617580938616156	0.9013668365565892	1.1231721879799372	1.160551971382292	1.1309625652447313	1.0043445968218618	1.0	10.714086004489406	-8.269643874051923	24.996666747829547	1.0967880361157554	0.9595627165964338	0.5665286678214951	0.055102856703583274	438.06344942605614	1334645.930253288	0.019476936101320327	0.017463771350801946	5.374723485783002e-09	8.269643874051923	-0.1372253195193216	
AVALDS(ph)DNIS(ph)LK	ddPTM_K562_Methotrexat_30min_R1	2	AVALDSDNISLK	12	0	A0A0A0MRJ3;Q8NEY1-5;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1;H0Y6F6;Q8NEY1-6	A0A0A0MRJ3	NAV1	Neuron navigator 1	2	AVALDS(1)DNIS(1)LK;AVALDS(1)DNIS(1)LK	126.83	0.00074153	17150100.0	326.04	314.82	263.23	322.54	254.85999999999999	361.7	233.51	152.27	321.26	231.375	True	False	311.70767198927297	366.838653974963	207.98162025078966	294.26341897565555	288.3785571680131	431.59340594058466	285.88056165022863	146.91457779254242	306.32469272094096	189.47074543040938	1.6451493410298528	1.9361229256877495	1.0976977990894068	1.5530810221239955	1.5220215475107821	2.277889417493765	1.508837477790098	0.7753945204511934	1.6167387320141768	1.0	7.565831301070329	-9.014563370850082	24.885901374415624	1.1460630920394819	1.666313995308716	0.33073088580549137	0.34416578399373426	776.6180447171297	1327081.5828872481	0.15646091214154578	0.0946784823787926	9.670226115341722e-10	9.014563370850082	0.5202509032692342	
AVCSTY(ph)LQSR	ddPTM_K562_Methotrexat_30min_R1	2	AVCSTYLQSR	10	0	H7BXX9;Q5SQL3;J3KP92;Q9H2X6-2;Q86Z02-2;Q9H2X6-3;Q9H2X6;Q86Z02	H7BXX9	HIPK2;HIPK1	Homeodomain-interacting protein kinase 2;Homeodomain-interacting protein kinase 1	1	AVCST(0.015)Y(0.985)LQSR;AVCS(0.001)T(0.488)Y(0.511)LQSR	167.12	1.5852e-05	150762000.0	986.44	1137.92	1151.51	965.56	1158.08	1176.13	796.38	1075.11	1114.24	930.14	True	False	943.0772787299057	1325.9419386671436	909.8237873152259	880.9108539286103	1310.3878187441453	1403.4004769944697	974.9884873753123	1037.297771921851	1062.4392256035035	761.6826327591185	1.2381499041322543	1.740806317014283	1.194491968419289	1.156532676526442	1.72038558106202	1.8425002968897861	1.2800455799333572	1.361850365636334	1.394858146830688	1.0	9.573046190748544	-10.486995432329238	0.9959564452121753	1.00027073338891	1.4608422104915253	0.2454208813460954	0.23271201686737328	2.6574603867107336	3.952849841978273	0.23817312197388932	0.07568206715999191	3.2584012799143915e-11	10.486995432329238	0.46057147710261526	
AVDGY(ph)VKPQIK	ddPTM_K562_Methotrexat_30min_R1	1	AVDGYVKPQIK	11	1	K7EK35;P42229-2;P42229;K7EM17;P51692	K7EK35;P51692	STAT5A;STAT5B	Signal transducer and activator of transcription;Signal transducer and activator of transcription 5A;Signal transducer and activator of transcription 5B	1	AVDGY(1)VKPQIK	84.17	0.022363	59177000.0	1967.7	1154.1	3027.7	1918.6	1216.8	875.74	847.04	1507.4	1654.5	2088.1	True	False	1881.2022640574537	1344.7954086541679	2392.227145968605	1750.3993168186678	1376.8305279841422	1044.964360847131	1037.0102819588446	1454.3838875975462	1577.5826561252468	1709.9248558972997	1.1001666287085314	0.7864646238787337	1.399024721886542	1.0236703155590592	0.8051994350720383	0.6111171243830922	0.606465411846805	0.8505542700204473	0.922603499612499	1.0	10.739717210705209	-7.739283978687503	4.39712803115414	0.7705328645177993	1.0850327089729734	0.3624593105009015	0.17991583303732794	0.21393491900387182	9.58988632413806	0.05638876374449246	0.07042235185258516	1.8227034739421454e-08	7.739283978687503	0.3144998444551741	
AVEHINK	ddPTM_K562_Methotrexat_30min_R1	2	AVEHINK	7	0	P06733;K7EM90;K7ERS8;A0A2R8YEM5;A0A2R8Y879;A0A2R8Y6I8	P06733	ENO1	Alpha-enolase;Enolase	0	;	115.46	0.012165	7697300.0	17419.8	12324.9	20494.4	19361.7	13385.8	12412.599999999999	11856.5	16993.6	16204.0	21633.2	False	True	16654.046449879566	14361.38023751993	16192.90551254715	17664.289821978524	15146.267325353494	14811.15927724107	14515.621939985173	16395.925455935838	15450.679576822902	17715.21785000599	0.9400983149565918	0.8106804194629238	0.9140675350228151	0.9971251819504185	0.8549862301212612	0.8360698356998225	0.8193871541907267	0.9255277352364196	0.872169888490402	1.0	14.112701586422036	-12.121026596249934	3.277259440067008	1.0001487361111365	0.8843582634954016	0.27271768048604594	0.05603000320092621	19488883.76843406	29760464.738223244	31552.531526098403	0.014337058122982062	7.56786547896301e-13	12.121026596249934	-0.11579047261573494	
AVFGESGGGGGSGEDEQFLGFGS(ph)DEEVRVR	ddPTM_K562_Methotrexat_30min_R1	2	AVFGESGGGGGSGEDEQFLGFGSDEEVRVR	30	1	Q03164-2;Q03164;Q03164-3;H7C5W4	Q03164-2	KMT2A	Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180	1	AVFGESGGGGGS(0.001)GEDEQFLGFGS(0.999)DEEVRVR;AVFGESGGGGGS(0.005)GEDEQFLGFGS(0.995)DEEVRVR	70.112	6.3309e-05	25117100.0	944.4	914.45	1614.74	1071.11	989.2	1020.8900000000001	1015.03	1032.39	1391.75	1609.79	True	False	902.8853067926302	1065.5473195076715	1275.8281407277289	977.2074493055572	1119.297138627477	1218.1625440715602	1242.6763157544938	996.0802585357778	1327.047846275197	1318.2414318159651	0.6849164993614605	0.8083096872777009	0.9678258549120178	0.7412962646450802	0.8490835681636638	0.9240815185071678	0.9426773319077254	0.7556129207406348	1.0066804260939517	1.0	10.364398904314186	-3.0000000000000004	0.13532025909930526	1.0119918609209244	0.14232159830950517	0.37929795615049455	0.08683065395980763	97.5112708810053	0.8874000150921663	0.4179773280894465	16.297247579912742	0.000999999999999999	3.0000000000000004	-0.8696702626114192	
AVFPSIVGRPR	ddPTM_K562_Methotrexat_30min_R1	2	AVFPSIVGRPR	11	1	P60709;P63261;A0A2R8Y793;A5A3E0;I3L3I0;P68133;P62736;Q6S8J3;P68032;I3L1U9;P63267;J3KT65;I3L3R2;E7EVS6;B8ZZJ2;F6QUT6;C9JFL5;K7EM38;G5E9R0;A6NL76;F8WB63;A0A2R8YGF8;C9JUM1;C9JZR7;P0CG38;F6UVQ4;C9JTX5;I3L4N8;P63267-2;F8WCH0	P60709	ACTB;ACTG1;POTEF;ACTA1;ACTA2;POTEE;ACTC1;ACTG2;POTEI	Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member F;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;POTE ankyrin domain family member E;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member I	0	;	219.72	3.3705999999999995e-24	141391000.0	7479.0	6451.1	8070.799999999999	7536.3	6501.799999999999	6430.8	6534.700000000001	7673.0	7720.700000000001	7921.4	False	True	7150.232115101743	7517.03462504887	6376.849374007803	6875.60427986059	7356.900663089497	7673.461086322116	8000.272820075155	7403.136240902194	7361.766342185678	6486.757700064596	1.1022813623870273	1.1588277183490319	0.983056508175772	1.059944674639554	1.1341414313989617	1.1829424561743231	1.2333238252440795	1.1412691182882433	1.1348915255632823	1.0	12.663281835480236	-7.879045233853773	4.9530272395929655	1.1536770367654756	1.0756451657210804	0.14245696518693773	0.0691615224835385	0.33746998343651036	13.2231446646061	0.021835063789201435	0.02500988020553597	1.3211580220741001e-08	7.879045233853773	-0.07803187104439524	
AVFVDLEPTVIDEVR	ddPTM_K562_Methotrexat_30min_R1	3	AVFVDLEPTVIDEVR	15	0	P68363;Q71U36;Q9BQE3;Q71U36-2;F5H5D3;F8VVB9;F8VQQ4;F8VRZ4;P68363-2;F8VS66;A0A1W2PQM2;F8VWV9;F8VX09;F8VRK0	P68363	TUBA1B;TUBA1A;TUBA1C	Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain	0	;;	273.44	7.185899999999998e-124	64371000.0	6147.4	4963.299999999999	6274.4	6508.299999999999	5383.6	5349.5	6059.699999999999	7253.4	6930.9	7941.799999999999	False	True	5877.167656688924	5783.400963324867	4957.48918474929	5937.727443787621	6091.637763359165	6383.215164719817	7418.74197863856	6998.293810733744	6608.683971797203	6503.463062384549	0.903698168239309	0.8892802046921037	0.7622845147569094	0.9130100973634967	0.9366759993752644	0.9815101744238028	1.1407371591833746	1.0760872697519037	1.016179212275571	1.0	12.666992435492629	-8.160189863303874	1.6572443467958744	1.0624819164567745	0.8595751915268369	0.7094680312821418	0.05426034880293249	0.19856339257833713	1.0859599114033003	0.023028684321334095	0.022601396677482715	6.915285848393722e-09	8.160189863303874	-0.20290672492993755	
AVGAQASVGSRSEGEGEAASADDGS(ph)LNTSGAGPK	ddPTM_K562_Methotrexat_30min_R1	1	AVGAQASVGSRSEGEGEAASADDGSLNTSGAGPK	34	1	M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8;M0R2I2	M0QXG9	BABAM1	BRISC and BRCA1-A complex member 1	1	AVGAQAS(0.001)VGS(0.005)RS(0.055)EGEGEAAS(0.143)ADDGS(0.666)LNT(0.093)S(0.036)GAGPK	67.033	3.9063e-05	12800000.0	1634.6	1173.0	1663.9	1638.7	941.28	1168.4	1146.1	1259.6	1306.5	1731.3	True	False	1562.7449412147764	1366.818312409097	1314.6701285388795	1495.0377152458823	1065.074818689114	1394.1767638954345	1403.142099727323	1215.299154051924	1245.7611001678063	1417.744793359991	1.1022752109786569	0.9640792326027869	0.9272967424716622	1.054518219532805	0.7512457980289491	0.983376394979592	0.9897000548328164	0.8572058664886506	0.8786920650333752	1.0	10.46938214270477	-3.000003540143298	0.8666175835222274	0.9210019166395855	72.2564120725526	0.2830573570050048	0.08174612667400982	967.3707859381769	2.4725383667506318	0.027399883533064055	136209.04040397488	0.000999991848552038	3.000003540143298	71.33541015591302	
AVIVSS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	AVIVSSPK	8	0	Q14966-3;Q14966;Q14966-5	Q14966-3	ZNF638	Zinc finger protein 638	1	AVIVS(0.042)S(0.958)PK	120.31	0.0055562	35786000.0	11288.0	8666.7	16831.0	12915.0	9117.2	8096.6	8176.4	10692.0	10599.0	12793.0	True	False	10791.793035869567	10098.724866288077	13298.403109224033	11782.762001831074	10316.27160563529	9661.15336062631	10010.165835625585	10315.956299716712	10106.254803427919	10476.063733295427	1.030138161680964	0.9639808542011752	1.2694083816002895	1.1247317982977374	0.9847469305525243	0.9222121596989585	0.9555273899118132	0.9847168328052592	0.9646996296240384	1.0	13.354809121310272	-7.83144182386019	5.660410924679308	0.9633057791758475	1.0996551978963867	0.4126671048353341	0.07512022231391338	0.21168646649125744	12.24095978813861	0.02501954260151456	0.02875992843038542	1.4742060057684985e-08	7.83144182386019	0.13634941872053918	
AVKLT(ph)S(ph)S(ph)RT(ph)QLPYEYYSLPFCQPSK	ddPTM_K562_Methotrexat_30min_R1	1	AVKLTSSRTQLPYEYYSLPFCQPSK	25	2	F8WCN2;F2Z2L1;A0A0C4DFM1;Q92544	F8WCN2	TM9SF4	Transmembrane 9 superfamily member 4	4	AVKLT(0.948)S(0.948)S(0.948)RT(0.91)QLPY(0.112)EY(0.042)Y(0.042)S(0.043)LPFCQPS(0.005)K	44.5	0.027545999999999998	16765000.0	1171.1	822.04	1497.5	1564.1	729.31	692.99	771.87	1123.3	985.04	1532.7	True	False	1119.6198462355455	957.8681377090993	1183.1952145483324	1426.9777814219105	825.2270482939801	826.9005097671152	944.9814959571846	1083.7929023074992	939.2457054032119	1255.1131778333386	0.8920469213527892	0.7631727198997593	0.9427000173728111	1.1369315585429964	0.6574921392495798	0.6588254544459224	0.7529054053822267	0.863502129886339	0.7483354664673361	1.0	10.293601747433248	-7.790274220899133	24.999908974000803	0.7659207849437651	0.9221737391030636	0.2543138359034204	0.12678778654631837	301.1623770979908	261107.0866929438	0.040523271984785406	0.04595652862918437	1.6207863821959953e-08	7.790274220899133	0.1562529541592984	
AVPALGKSPPHHS(ph)GFQQYQQADASK	ddPTM_K562_Methotrexat_30min_R1	1	AVPALGKSPPHHSGFQQYQQADASK	25	1	B1ALB4;E9PD50;Q92540-2;Q92540;Q92540-5;Q92540-4	B1ALB4	SMG7	Protein SMG7	1	AVPALGKS(0.124)PPHHS(0.87)GFQQY(0.006)QQADASK	48.255	0.030470999999999998	13709000.0	3290.3	2076.6	4034.1	3354.4	2024.0	1857.3	1645.3	2547.7	3099.9	4152.2	True	False	3145.6623516939776	2419.7228538352347	3187.39753923835	3060.3249600419776	2290.1914765285214	2216.1969390474083	2014.3004071907903	2458.095946949893	2955.7863256105497	3400.196344359355	0.9251413839416573	0.7116420961540516	0.9374157302786291	0.9000436004581924	0.6735468321786064	0.6517849896297595	0.592407085706197	0.722927648289391	0.8692987187383915	1.0	11.731402341864717	-6.2463157816878665	22.99767537379833	0.7704789418738961	0.9251417217578201	0.08750886982502859	0.12962127083270863	2201.3838835840866	3347359.259597824	0.03382076978612535	0.6871082143667996	5.671320856554405e-07	6.2463157816878665	0.15466277988392396	
AVPIAVADEGES(ph)ESEDDDLKPR	ddPTM_K562_Methotrexat_30min_R1	4	AVPIAVADEGESESEDDDLKPR	22	1	Q9Y2K6	Q9Y2K6	USP20	Ubiquitin carboxyl-terminal hydrolase 20	1	AVPIAVADEGES(0.999)ES(0.001)EDDDLKPR;AVPIAVADEGES(0.998)ES(0.002)EDDDLKPR;AVPIAVADEGES(0.993)ES(0.007)EDDDLKPR;AVPIAVADEGES(0.941)ES(0.059)EDDDLKPR	140.2	3.8418000000000004e-13	136207000.0	5718.74	4389.389999999999	7190.22	5889.5	4115.87	4030.0400000000004	3829.1600000000003	4914.83	5378.799999999999	6922.8099999999995	True	False	5467.351037025933	5114.662090626906	5681.091082170094	5373.176679038641	4657.179047677594	4808.788193742859	4687.9466037796665	4741.972643147838	5128.740762022653	5669.022025599539	0.9644257884935139	0.9022124217423542	1.0021289486116043	0.9478136889881619	0.821513662611862	0.8482571018471737	0.8269409754646143	0.8364710212333919	0.9046958609197241	1.0	12.468884159069294	-7.706592155330263	9.081069889717492	0.861317621580509	0.9541767607587506	0.3347525069947449	0.05459738334059061	0.321509990387647	49.66523434541548	0.015368228248627413	0.01980740421258742	1.965204928711455e-08	7.706592155330263	0.09285913917824162	
AVPMAPAPAS(ph)PGSSNDSSAR	ddPTM_K562_Methotrexat_30min_R1	9	AVPMAPAPASPGSSNDSSAR	20	0	Q66K74-2;Q66K74	Q66K74-2	MAP1S	Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain	1	AVPMAPAPAS(0.419)PGS(0.419)S(0.134)NDS(0.022)S(0.007)AR;AVPMAPAPAS(0.958)PGS(0.028)S(0.013)NDSSAR;AVPMAPAPAS(0.84)PGS(0.12)S(0.038)NDS(0.002)S(0.001)AR;AVPMAPAPAS(0.733)PGS(0.184)S(0.063)NDS(0.012)S(0.007)AR;AVPMAPAPAS(0.488)PGS(0.488)S(0.022)NDS(0.001)SAR;AVPMAPAPAS(0.753)PGS(0.183)S(0.061)NDS(0.002)S(0.001)AR;AVPMAPAPAS(0.984)PGS(0.012)S(0.001)NDS(0.002)S(0.002)AR;AVPMAPAPAS(0.951)PGS(0.038)S(0.011)NDSSAR;AVPMAPAPAS(0.848)PGS(0.06)S(0.06)NDS(0.016)S(0.016)AR	241.11	1.9500999999999994e-70	687282000.0	12915.279999999999	12369.06	14542.51	13387.69	11567.730000000001	11288.5	10875.729999999998	12765.730000000001	13227.800000000001	13374.670000000002	True	False	12347.539755519612	14412.836926928274	11490.235886157774	12214.012003429632	13089.089253351418	13469.842861377627	13314.889301341447	12316.752040215357	12612.842465212185	10952.387659797876	1.1273833742064132	1.3159538700252926	1.049107851462758	1.115191717351524	1.1950900260220496	1.2298544645950023	1.2157065395169888	1.1245723236610363	1.1516066502566575	1.0	13.41895779635743	-10.417848029941384	1.2383488629519765	1.0003206159791915	1.1763896759511514	0.3528582205531374	0.06978795081505061	1.8273504335587791	4.114101938967915	0.06782819676391826	0.020530236991253645	3.8207794569050355e-11	10.417848029941384	0.17606905997195987	
AVPPGNDPVS(ph)PAMVR	ddPTM_K562_Methotrexat_30min_R1	4	AVPPGNDPVSPAMVR	15	0	A0A0A0MR08;E7ESU0;O94966-2;O94966-4;O94966-3;O94966;O94966-7;O94966-6;O94966-5;H0YB23	A0A0A0MR08	USP19	Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 19	1	AVPPGNDPVS(1)PAMVR;AVPPGNDPVS(1)PAMVR;AVPPGNDPVS(1)PAMVR;AVPPGNDPVS(1)PAMVR	86.777	0.014218999999999999	64403100.0	3429.93	3025.3	4917.62	3772.12	3537.81	3384.9100000000003	3287.56	3672.0600000000004	3738.83	4104.700000000001	True	False	3279.154384082219	3525.1794036924443	3885.478765253536	3441.4240961941164	4003.09402548289	4038.9959516238437	4024.879016996384	3542.9115684565795	3565.0126093688486	3361.299054643769	0.9755616298264018	1.0487550635586167	1.1559455740439375	1.023837522412548	1.190936587434092	1.2016175549877983	1.1974177101070054	1.0540304539585388	1.060605602599876	1.0	11.714803189538928	-6.491113834800226	3.2479474257067564	1.118589642681678	0.9792556628389468	0.2546333083361224	0.0711719245187262	0.3423074603527967	6.8502920415256705	0.019023983711476098	0.08906910535227829	3.227647998085865e-07	6.491113834800226	-0.1393339798427311	
AVPPVS(ph)PELR	ddPTM_K562_Methotrexat_30min_R1	4	AVPPVSPELR	10	0	Q96JM3	Q96JM3	CHAMP1	Chromosome alignment-maintaining phosphoprotein 1	1	AVPPVS(1)PELR;AVPPVS(1)PELR;AVPPVS(1)PELR;AVPPVS(1)PELR	142.19	3.5286e-05	616570000.0	13903.5	13794.400000000001	15175.9	13873.5	14168.999999999998	12648.1	12534.2	14068.3	14977.5	14281.3	True	False	13292.318787580829	16073.690135290739	11990.685980944267	12657.23179499833	16032.471853227584	15092.166319262105	15345.313416283232	13573.509915011658	14281.199294116588	11694.818181373561	1.1365990117530533	1.3744283909339818	1.0252990508259407	1.0822940210526413	1.370903899879576	1.2905002955325573	1.3121463863990503	1.1606430903415246	1.2211561627236223	1.0	13.513581811922155	-10.716790755750289	1.3956228409971356	0.9999300553081975	1.2239843484457595	0.2529526633013597	0.11293316620234632	9.245311741807388	16.43972169289031	0.11366364459012582	0.03287203040997883	1.919593383160842e-11	10.716790755750289	0.2240542931375621	
AVPQGPPGLPPRPPLSSSS(ph)PQPSQPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	AVPQGPPGLPPRPPLSSSSPQPSQPSR	27	1	Q13470-2;Q13470	Q13470-2	TNK1	Non-receptor tyrosine-protein kinase TNK1	2	AVPQGPPGLPPRPPLS(0.002)S(0.035)S(0.376)S(0.414)PQPS(0.222)QPS(0.952)R	54.425	0.023994	8437400.0	2121.8	1834.1	2223.3	2095.6	2233.0	2002.8	1863.0	2200.1	2450.2	2611.9	True	False	2028.5282125715853	2137.1538506304546	1756.659713192192	1911.8820016288948	2526.6786398657046	2389.8127548183656	2280.8251738870986	2122.7212359714476	2336.290736801499	2138.859600171525	0.9484157877445103	0.9992024957875059	0.8213066968263448	0.8938791501207336	1.1813204754828595	1.1173303542816535	1.0663744238771862	0.9924546874424187	1.0923067304717622	1.0	11.0626260683412	-7.741371293170179	24.980781459019436	1.0762759840514455	0.9149229126494172	0.584021189700332	0.06584114195054708	181.6350128530679	226098.56019302813	0.020548864963610025	0.02649490597234849	1.813964179792211e-08	7.741371293170179	-0.16135307140202837	
AVPVES(ph)PVQKV	ddPTM_K562_Methotrexat_30min_R1	2	AVPVESPVQKV	11	1	Q8TB61-5;Q8TB61-4;Q8TB61-3;Q8TB61-2;Q8TB61	Q8TB61-5	SLC35B2	Adenosine 3-phospho 5-phosphosulfate transporter 1	1	AVPVES(1)PVQKV;AVPVES(1)PVQKV	182.71	0.00028852	103738600.0	6881.3	5015.3	8367.1	7029.5	4957.1	4622.8	4741.9	5960.1	5773.1	7242.6	True	False	6578.806291435969	5843.993079475993	6610.960053186884	6413.234649002828	5609.045537697397	5516.090674542809	5805.3917831751105	5750.479904783158	5504.7098410859235	5930.894957771077	1.1092434343009148	0.9853475944332449	1.11466483562059	1.0813266285554013	0.9457334142038765	0.9300604232275667	0.9788390832261287	0.9695804673202775	0.9281415166311897	1.0	12.534034105068685	-7.761708169360348	24.99999684539723	0.956777224337691	1.0694114355328284	0.6742324968234985	0.03875277939812264	4.2557130126835965	395847.02226943464	0.011480743282258054	0.013849660861887766	1.730979125683645e-08	7.761708169360348	0.11263421119513739	
AVQQHQHGYDS(ph)DEEVDSELGTWEHQLR	ddPTM_K562_Methotrexat_30min_R1	4	AVQQHQHGYDSDEEVDSELGTWEHQLR	27	0	Q8IWZ8	Q8IWZ8	SUGP1	SURP and G-patch domain-containing protein 1	1	AVQQHQHGY(0.027)DS(0.973)DEEVDSELGTWEHQLR;AVQQHQHGY(0.016)DS(0.984)DEEVDSELGTWEHQLR;AVQQHQHGY(0.04)DS(0.934)DEEVDS(0.025)ELGTWEHQLR;AVQQHQHGY(0.008)DS(0.992)DEEVDSELGTWEHQLR	160.25	6.014e-36	455819000.0	2663.46	2138.66	2972.7	3168.4799999999996	2524.05	2698.3	2419.36	3413.33	3310.27	3814.9	True	False	2546.377487536956	2492.0372139956	2348.7708943491357	2890.7042777825554	2856.0068163694746	3219.708286562012	2961.963066395859	3293.2812492061403	3156.3762702276968	3123.984642863183	0.8151056354755826	0.7977110962080809	0.7518509733122275	0.925326020531643	0.9142192241226569	1.0306415218517517	0.9481362442554043	1.0541925219542034	1.0103686896920294	1.0	11.60917164604224	-7.658412617547517	1.3757019351940074	1.008895775806636	0.7864025030618712	0.8482000178027405	0.03889805392749533	0.14612609783702163	0.573968903062638	0.014063433656281977	0.02183679126204433	2.1957727063129352e-08	7.658412617547517	-0.22249327274476471	
AVQQHQHGYDS(ph)DEEVDSELGTWEHQLRR	ddPTM_K562_Methotrexat_30min_R1	1	AVQQHQHGYDSDEEVDSELGTWEHQLRR	28	1	Q8IWZ8	Q8IWZ8	SUGP1	SURP and G-patch domain-containing protein 1	1	AVQQHQHGY(0.065)DS(0.923)DEEVDS(0.01)ELGT(0.001)WEHQLRR	53.266000000000005	0.0038913000000000003	39091000.0	708.13	582.71	559.52	628.09	522.72	864.96	489.23	663.49	698.58	875.64	True	False	677.0014530909211	678.9929231235332	442.08439829321054	573.0263248726349	591.4668421991047	1032.1012784140669	598.9522811705773	640.1546806302882	666.1031682780147	717.053110874916	0.94414408475946	0.9469213825668457	0.616529503308059	0.7991406998757091	0.8248577870018908	1.4393651777826377	0.8352969565110213	0.8927576924520978	0.92894537123654	1.0	9.485936170568195	-8.061059450750284	24.99999699950165	1.0156318012891037	0.8192237351721398	0.23133287826899007	0.1755926057851638	378.8620930939593	155118.86885202606	0.05979790492792865	0.05979799266486536	8.68841485077019e-09	8.061059450750284	-0.19640806611696393	
AVS(ph)FHLVHR	ddPTM_K562_Methotrexat_30min_R1	2	AVSFHLVHR	9	0	Q96GA3	Q96GA3	LTV1	Protein LTV1 homolog	1	AVS(1)FHLVHR;AVS(1)FHLVHR	106.16	0.0043371	9491300.0	8243.8	7826.0	10926.7	7641.9	9826.7	9456.9	8685.400000000001	11961.0	9439.1	12251.2	True	False	7881.412422847405	9119.113480744747	8633.334992190497	6971.94649181516	11119.083291700998	11284.312083603856	10633.32204255448	11540.324850440657	9000.27830125828	10032.388963444768	0.7855967757595003	0.9089672972182655	0.8605462790216734	0.6949437982537352	1.1083186001076952	1.1247881361778085	1.0598993002862374	1.1503067606818662	0.8971221444914854	1.0	13.292377568283946	-7.774403043902202	24.998832291430052	1.067814987283584	0.8228339946954755	0.6633081087258347	0.08489564477426648	134.82564483202094	259993.70246930397	0.025890161572967075	0.02953797098743506	1.681113191775837e-08	7.774403043902202	-0.24498099258810857	
AVS(ph)PAVPFSR	ddPTM_K562_Methotrexat_30min_R1	4	AVSPAVPFSR	10	0	I3L2J0	I3L2J0	CIC		1	AVS(1)PAVPFSR;AVS(0.991)PAVPFS(0.009)R;AVS(0.996)PAVPFS(0.004)R;AVS(0.983)PAVPFS(0.017)R	106.62	0.0037659	247386000.0	10799.2	9427.199999999999	12083.3	12533.3	9669.0	9427.0	9755.7	11248.8	10930.0	12040.5	True	False	10324.480098596965	10984.884564998321	9547.180458064691	11434.525048203584	10940.642977546575	11248.634331771877	11943.664062743084	10853.17332811946	10421.866685674799	9859.848775169507	1.0471235750184689	1.1141027429002808	0.9682887309699697	1.1597059254092876	1.1096156976665688	1.1408526224154483	1.2113435342762398	1.100744400406169	1.0570006623144816	1.0	13.267349804187576	-7.286138741503909	24.979216804427665	1.1208476975646091	1.0502647556763374	0.182704503824618	0.06333703294235955	1166.147901756273	1179358.1655669736	0.017538147776530885	0.026028729251010737	5.1744150155014684e-08	7.286138741503909	-0.07058294188827174	
AVSPPHLDGPPS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	AVSPPHLDGPPSPR	14	0	P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2;P29590-12;P29590-13;P29590-11;P29590-4;H3BT57;H3BRN3;H3BUJ5	P29590-2;P29590-4	PML	Protein PML	1	AVSPPHLDGPPS(1)PR;AVSPPHLDGPPS(1)PR;AVSPPHLDGPPS(1)PR;AVSPPHLDGPPS(1)PR	165.16	5.5229e-09	425862000.0	14127.6	11745.699999999999	15993.7	15150.5	13372.800000000001	12922.6	13145.2	14003.8	14503.3	14768.8	True	False	13506.567619910602	13686.4772822366	12636.840936842513	13822.279187668728	15131.55759749043	15419.70955932484	16093.345719689036	13511.278416570602	13829.044748613656	12094.027207401965	1.1167965300792537	1.1316724402488527	1.0448827938065433	1.1429012809900918	1.2511595466090395	1.2749855192890125	1.3306854237800416	1.1171860443890211	1.1434606943954781	1.0	13.562007109222888	-7.543038179652484	7.746509120286319	1.2033625008746978	1.0998883916904507	0.14887079198885977	0.08962252683321979	0.2695404632648705	75.6464209539971	0.026724315324136824	0.03512258202336075	2.863926185650708e-08	7.543038179652484	-0.10347410918424704	
AVSPPHLDGPPS(ph)PRS(ph)PVIGSEVFLPNSNHVASGAGEAEER	ddPTM_K562_Methotrexat_30min_R1	2	AVSPPHLDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEER	40	1	P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2;P29590-12;P29590-13;P29590-11	P29590-2	PML	Protein PML	2	AVS(0.002)PPHLDGPPS(0.982)PRS(0.982)PVIGS(0.031)EVFLPNS(0.004)NHVASGAGEAEER;AVSPPHLDGPPS(0.989)PRS(0.99)PVIGS(0.021)EVFLPNSNHVASGAGEAEER	123.86	7.7481e-37	95907000.0	1154.17	1068.6499999999999	1638.13	1446.4	1061.2	1324.6399999999999	1307.54	1469.04	1368.87	1295.92	True	False	1103.434068764137	1245.2262485558233	1294.308899370992	1319.5963576808722	1200.7664006383736	1580.607932665568	1600.7891292884246	1417.3730305402016	1305.2315324812123	1061.2163302784495	1.0397824056049063	1.1733952946512725	1.219646609689263	1.2434753593874937	1.131500115837181	1.4894304653706532	1.5084475084061306	1.3356117787673896	1.22993917002647	1.0	10.05150306608621	-6.569223811982371	0.7676596987670484	1.320032408493599	0.9724938870154578	0.18778634320001142	0.14469188623190202	2.7400974049711695	1.6640063617517515	0.0614761043922322	0.7595180959547095	2.696349521030718e-07	6.569223811982371	-0.34753852147814124	
AVSPPHLDGPPS(ph)PRSPVIGS(ph)EVFLPNSNHVASGAGEAEER	ddPTM_K562_Methotrexat_30min_R1	1	AVSPPHLDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEER	40	1	P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2;P29590-12;P29590-13;P29590-11	P29590-2	PML	Protein PML	2	AVS(0.001)PPHLDGPPS(0.694)PRS(0.599)PVIGS(0.702)EVFLPNS(0.004)NHVASGAGEAEER	89.5	7.4792e-15	47460000.0	1137.3	1065.8	1021.8	1014.7	1087.1	893.08	1054.7	914.3	989.88	1184.1	True	False	1087.3056537645691	1241.90533449754	807.3381437231958	925.7428264233827	1230.0727046117374	1065.6550704379788	1291.2433230803654	882.1435507698271	943.860694859631	969.6480158364028	1.1213405648302974	1.2807795346503055	0.8326094938964	0.9547204875419167	1.2685765190275735	1.0990122735606918	1.3316619041050268	0.9097564645753483	0.9734054826539009	1.0	9.921317330926652														
AVSPPHLDGPPS(ph)PRSPVIGS(ph)EVFLPNSNHVASGAGEAGR	ddPTM_K562_Methotrexat_30min_R1	1	AVSPPHLDGPPSPRSPVIGSEVFLPNSNHVASGAGEAGR	39	1	P29590-4;H3BT57;H3BRN3;H3BUJ5	P29590-4	PML	Protein PML	2	AVSPPHLDGPPS(0.638)PRS(0.638)PVIGS(0.724)EVFLPNSNHVASGAGEAGR	80.538	1.1025999999999999e-09	13325000.0	1102.8	849.51	676.13	968.01	707.82	881.69	674.07	864.41	897.04	925.79	True	False	1054.322232455435	989.8770882989354	534.2195528631482	883.146066232481	800.9107366187833	1052.0641141381084	825.247356394029	834.0082103477478	855.336806195583	758.1204599114799	1.3907054197937625	1.3056989497612503	0.7046631519818435	1.164915225128734	1.056442582636933	1.3877268452310998	1.0885438397090443	1.1000998580688994	1.1282333763890957	1.0	9.566283290294361	-10.409379974014342	1.0703341272997784	1.0005524994380806	1.1464746358114222	0.05512428618752607	0.18754326141677818	5.421906322534864	9.880604794108764	0.18620577920280007	0.05865750436395581	3.89600966862965e-11	10.409379974014342	0.14592213637334162	
AVSPPHLDGPPSPRS(ph)PVIGSEVFLPNSNHVASGAGEAEER	ddPTM_K562_Methotrexat_30min_R1	1	AVSPPHLDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEER	40	1	P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2;P29590-12;P29590-13;P29590-11	P29590-2	PML	Protein PML	1	AVS(0.003)PPHLDGPPS(0.158)PRS(0.418)PVIGS(0.418)EVFLPNS(0.004)NHVASGAGEAEER	47.701	0.0018359000000000001	11658000.0	332.87	126.45	441.9	257.97	245.45	186.3	293.95	289.64	359.07	318.49	True	False	318.2374333672838	147.34371321750234	349.1512289208068	235.35417062426328	277.73097723020044	222.299838337658	359.8757701900765	279.4531970304851	342.3769140736733	260.8083747688	1.2201963746347995	0.5649500839385193	1.3387270605490353	0.9024026580162496	1.064885195793279	0.8523493102348465	1.3798474474184246	1.0714885872749036	1.312752761015369	1.0	8.026846386197354	-8.753240277655873	24.99990531153949	1.1969795929332199	0.9864316995345053	0.1643540517593668	0.22113158904331717	308.2566748254872	939909.2747987341	0.07952823826246927	0.06052526899057559	1.7650610132845103e-09	8.753240277655873	-0.2105478933987146	
AVSTVVVTT(ph)APSPK	ddPTM_K562_Methotrexat_30min_R1	1	AVSTVVVTTAPSPK	14	0	Q6P4R8-3;Q6P4R8;Q6P4R8-2	Q6P4R8-3	NFRKB	Nuclear factor related to kappa-B-binding protein	1	AVSTVVVT(0.01)T(0.917)APS(0.073)PK	208.15	2.5874e-18	12861000.0	2817.8	2320.2	3635.7	3224.0	2099.3	2140.8	1867.8	2277.2	2658.3	3471.2	True	False	2693.932885938453	2703.5736133432088	2872.6162547802146	2941.3569255829166	2375.394746381584	2554.4793017351494	2286.701696074246	2197.1095852707517	2534.716213223176	2842.532043384279	0.9477229613676031	0.9511145598641596	1.010583596222232	1.0347664971547614	0.8356615546023791	0.8986633264805072	0.8044594260234726	0.7729410088390433	0.8917106912206971	1.0	11.472960897129136	-7.7697662576811295	24.99976281002643	0.8543185727187217	0.9853043600062724	0.4528941343306154	0.06301658254030588	151.47514505516475	454772.32029883564	0.019271708389528158	0.02221078641463446	1.6991579128702182e-08	7.7697662576811295	0.13098578728755073	
AVT(ph)PSSEAKDSR	ddPTM_K562_Methotrexat_30min_R1	1	AVTPSSEAKDSR	12	1	H0YH87;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHH4;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A2R8Y5A6;A0A5F9ZHX3;A0A5F9ZHW5;Q99700-2;Q99700-5;Q99700-4;Q99700;F8W0B5	H0YH87	ATXN2	Ataxin-2	1	AVT(0.991)PS(0.008)SEAKDSR	172.33	0.025837	19643000.0	2474.0	1827.9	3806.1	3203.7	1741.9	1559.2	1845.0	2141.8	2125.4	3055.8	True	False	2365.2459222839575	2129.9294060124357	3007.251623433997	2922.8365950651337	1970.9903818997202	1860.4933329902105	2258.788215685289	2066.4716800162037	2026.5906179078877	2502.365008692579	0.9452042024515589	0.8511665558835754	1.2017637766623055	1.1680296778894939	0.7876510321447916	0.7434939853008375	0.9026613654837857	0.8258074552824256	0.8098701072257756	1.0	11.289076528931083	-7.776183866099817	24.999730195331697	0.83402070627886	1.039387371154528	0.4136950898226901	0.1142231003335501	240.69872290236938	408110.33648034075	0.03749945612897026	0.04269424268798508	1.6742339100025668e-08	7.776183866099817	0.20536666487566801	
AVTEQGAELSNEER	ddPTM_K562_Methotrexat_30min_R1	2	AVTEQGAELSNEER	14	0	E9PG15;P27348	E9PG15	YWHAQ	14-3-3 protein theta	0	;	267.37	3.5169e-105	25859000.0	1413.13	1553.2	1692.58	1489.63	1253.12	1323.1999999999998	1328.81	1460.1	1397.9	1677.66	False	True	1351.0104972340848	1809.8399001140738	1337.3305884742683	1359.0364506997767	1417.9272445985273	1578.889673045566	1626.829468230228	1408.747455407441	1332.9119341175474	1373.8195171422183	0.9833973679777238	1.3173782127355806	0.9734397945198411	0.9892394406557908	1.0321059112248316	1.1492700848579653	1.1841653491823396	1.0254239642321277	0.9702234663911562	1.0	10.423976770021369	-9.511162157599388	22.342654751238452	0.9893489128410812	1.0913575529945843	0.1525006039179052	0.1015039805346112	262.94182638369057	501432.17924861243	0.061352925144252626	0.026781385104592208	3.082036959273115e-10	9.511162157599388	0.10200864015350308	
AVTEQGHELSNEER	ddPTM_K562_Methotrexat_30min_R1	2	AVTEQGHELSNEER	14	0	Q4VY20;A0A0J9YWZ2;Q4VY19;A0A0J9YWE8;P31946-2;P31946	Q4VY20	YWHAB	14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed	0	;	240.73	2.7318999999999996e-60	85607000.0	6665.7	6058.0	7528.599999999999	6677.9	5972.9	5592.2	6017.200000000001	7241.5	7061.7	7756.0	False	True	6372.683809283818	7058.981531606399	5948.449744406399	6092.458875108606	6758.441042567785	6672.813504840851	7366.71027177319	6986.812340478729	6733.403108346724	6351.313242823364	1.0033647476739715	1.1114207820851318	0.936570047324909	0.9592439613953462	1.064101357338099	1.0506194939102973	1.159871980821788	1.1000579050912729	1.0601591908500343	1.0	12.632839209306548	-7.930354634119391	6.511545491313809	1.0827821353009717	1.0057489139149287	0.25727685023117497	0.05725223985111909	0.2879333989182743	21.167522974939807	0.01849273213219232	0.020992916191002527	1.1739385542917946e-08	7.930354634119391	-0.07703322138604296	
AVTETS(ph)FNSVNVNGQR	ddPTM_K562_Methotrexat_30min_R1	2	AVTETSFNSVNVNGQR	16	0	Q8IZT6-2;Q8IZT6	Q8IZT6-2	ASPM	Abnormal spindle-like microcephaly-associated protein	1	AVTET(0.01)S(0.808)FNS(0.182)VNVNGQR;AVTET(0.035)S(0.666)FNS(0.299)VNVNGQR	96.70700000000001	0.0032813000000000004	20138400.0	2801.3	2921.3	2837.8	2964.0	2574.3	2533.91	2242.49	3150.8	3166.7	3361.2	True	False	2678.158206181911	3403.9951713901914	2242.1845608315575	2704.150721906875	2912.86557214791	3023.5522456370086	2745.4254665539866	3039.98457810956	3019.4808081908864	2752.4541093060707	0.9730073962457849	1.2367127792907626	0.8146128770142661	0.9824507928267063	1.0582794322708184	1.098493244779033	0.9974464087418132	1.104463310698386	1.0970140421168135	1.0	11.426502795108055	-7.825401810573878	7.846227600016106	1.0636453101303822	1.0052084976383828	0.06984961115413502	0.10194256287562967	0.7567938426298472	80.75633066105325	0.03188446485280665	0.036308290775648094	1.4948519745123266e-08	7.825401810573878	-0.05843681249199939	
AVTGQTT(ph)QVSPPVIAGR	ddPTM_K562_Methotrexat_30min_R1	1	AVTGQTTQVSPPVIAGR	17	0	Q6MZP7-3;Q6MZP7	Q6MZP7-3	LIN54	Protein lin-54 homolog	1	AVT(0.002)GQT(0.07)T(0.81)QVS(0.118)PPVIAGR	107.73	0.0022924	25486000.0	1385.4	1185.6	1439.9	1588.9	1048.1	1217.7	1019.1	1276.4	1360.2	1323.8	True	False	1324.49947483112	1381.5002482457164	1137.6846673977593	1449.6036039263947	1185.9435210225008	1453.003291163532	1247.6591168590128	1231.5082885295933	1296.964598888826	1084.0469921157257	1.2218100178905578	1.2743914777619127	1.0494791053082941	1.3372147282076907	1.0939964131148083	1.3403508350940738	1.150927151620952	1.1360285093601603	1.1964099419320842	1.0	10.082211581780879	-11.061381987853572	0.5097724745601802	0.9786746112212293	1.2130140210677565	0.31032659267925766	0.09133877099638361	5.4860321928573885	1.6908555131057417	0.3235830683953296	0.04236743692611274	8.681964628793736e-12	11.061381987853572	0.23433940984652712	
AVTGQTTQVS(ph)PPVIAGR	ddPTM_K562_Methotrexat_30min_R1	2	AVTGQTTQVSPPVIAGR	17	0	Q6MZP7-3;Q6MZP7	Q6MZP7-3	LIN54	Protein lin-54 homolog	1	AVTGQT(0.001)T(0.008)QVS(0.991)PPVIAGR;AVTGQT(0.004)T(0.015)QVS(0.981)PPVIAGR	160.45	2.735e-09	29911300.0	1808.01	1785.96	1997.31	2064.49	1541.83	1922.46	1655.75	1709.6599999999999	1938.53	2228.5	True	False	1728.5320452500468	2081.0595338705443	1578.1019258561134	1883.4993670275044	1744.607670086942	2293.948186852462	2027.094085702394	1649.5302887554876	1848.4081634200518	1824.8970553934842	0.9471942760504597	1.140370919948592	0.8647621635379554	1.0321126671013146	0.9560033345063237	1.2570288170900914	1.1107991432784203	0.9039032003916605	1.0128835256526283	1.0	10.83359936681241	-5.970567739031489	16.96059019952137	1.030758010566609	0.6834394969511938	0.04984726084704516	0.10960039413918327	22407358.898905534	341104494.9876206	0.027961792043637735	224710106.41688037	1.0701194581352087e-06	5.970567739031489	-0.3473185136154152	
AVTPS(ph)SEAK	ddPTM_K562_Methotrexat_30min_R1	2	AVTPSSEAK	9	0	H0YH87;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHH4;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A2R8Y5A6;A0A5F9ZHX3;A0A5F9ZHW5;Q99700-2;Q99700-5;Q99700-4;Q99700;F8W0B5	H0YH87	ATXN2	Ataxin-2	1	AVT(0.038)PS(0.481)S(0.481)EAK;AVT(0.048)PS(0.476)S(0.476)EAK	82.029	0.030729000000000003	0.0	7216.7	5407.9	9671.099999999999	7450.8	6487.1	5685.4	5228.799999999999	7123.3	6704.599999999999	8209.5	True	False	6899.462509032589	6301.4635564170085	7641.268273401259	6797.599932113272	7340.267355428939	6784.023085802041	6401.491502534009	6872.769501475127	6392.904609403039	6722.679998318513	1.026296433975482	0.9373439696658387	1.136640190416992	1.0111443551996373	1.091866243412582	1.0091247965839325	0.9522231467413531	1.0223258437400196	0.9509458446634441	1.0	12.7148207631284	-8.52014087410045	24.670751525279407	0.9828684408474803	1.039799657830393	0.22208653259211764	0.05234330206097711	152.20225983370963	1371508.001103344	0.019381010045252296	0.015292163112484627	3.0189722836203576e-09	8.52014087410045	0.0569312169829127	
AVTSGLPGDTALLLPPS(ph)PRPSPR	ddPTM_K562_Methotrexat_30min_R1	2	AVTSGLPGDTALLLPPSPRPSPR	23	1	H7BYY2;Q6W2J9-4;Q6W2J9-2;Q6W2J9;Q6W2J9-3	H7BYY2	BCOR	BCL-6 corepressor	1	AVTSGLPGDTALLLPPS(0.98)PRPS(0.02)PR;AVTSGLPGDTALLLPPS(0.725)PRPS(0.275)PR	101.05	1.0785e-05	53956000.0	3805.1	2951.8	4298.0	3768.8	3215.3999999999996	2926.1000000000004	3544.0	4280.5	4428.1	5175.2	True	False	3637.832360098093	3439.5347779788335	3395.908535645233	3438.395155439483	3638.2814593032626	3491.5274125594256	4338.832214844805	4129.952388789504	4222.238597514782	4237.921131286677	0.8584002031660294	0.8116089637879964	0.8013147084250243	0.8113400530404751	0.8585061747476745	0.823877392805411	1.0238114585977418	0.9745231826755603	0.9962994748401243	1.0	12.049141023726499	-8.756324589943636	24.99843576230606	0.9965354723627694	0.8262687216909268	0.941349297372502	0.020924789232111933	27.944884874399612	136580.9403088885	0.008397531864093335	0.006301443554311004	1.7525701483680696e-09	8.756324589943636	-0.1702667506718426	
AVTTVTQSTPVPGPSVPPPEELQVS(ph)PGPR	ddPTM_K562_Methotrexat_30min_R1	4	AVTTVTQSTPVPGPSVPPPEELQVSPGPR	29	0	P51610-2;P51610;H7C1C4	P51610-2	HCFC1	Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6	1	AVTTVTQSTPVPGPSVPPPEELQVS(1)PGPR;AVTTVTQSTPVPGPSVPPPEELQVS(1)PGPR;AVTTVTQSTPVPGPSVPPPEELQVS(1)PGPR;AVTTVTQSTPVPGPSVPPPEELQVS(1)PGPR	181.42	1.7504e-35	400218000.0	6498.9	5747.9400000000005	7314.700000000001	6697.9	5791.5	6084.35	5843.780000000001	6733.200000000001	6609.9	7120.700000000001	True	False	6213.216137563138	6697.689386725267	5779.444431289946	6110.705506160613	6553.183763001444	7260.064527051684	7154.396422253328	6496.389539585912	6302.607191733011	5831.072229006228	1.0655357871672322	1.148620549306201	0.9911460884570314	1.0479557217218767	1.1238385507219628	1.2450650998519694	1.226943543361429	1.1140986227661722	1.0808659101118947	1.0	12.509545478077191	-5.18747437931738	10.608986471842965	1.111945632787176	1.107392682117857	0.0	0.08171617010864604	0.0	0.0	0.020125749860603996	0.0	6.4941994219755794e-06	5.18747437931738	-0.004552950669318934	
AVVIVDDR	ddPTM_K562_Methotrexat_30min_R1	2	AVVIVDDR	8	0	P23246-2;P23246;C9IZL7;H7C367;Q15233-2;Q15233	P23246-2;Q15233-2	SFPQ;NONO	Splicing factor, proline- and glutamine-rich;Non-POU domain-containing octamer-binding protein	0	;	125.25	0.020816	49947000.0	12189.9	11035.7	13488.8	12592.8	12092.7	11437.6	11396.9	12875.6	12565.0	12021.2	False	True	11654.046591774128	12859.161850173121	10657.685215358628	11488.80877558329	13683.102009988355	13647.754326198585	13952.944940565672	12422.757850040452	11980.855892543816	9844.044192190331	1.1838677645331726	1.3062885130457664	1.082653125817313	1.167082202322681	1.3899878690958845	1.3863971005967128	1.417399665031481	1.2619567331784143	1.2170664473498303	1.0	13.265035419064288	-6.23577439779825	21.508303378054602	1.2622491062450183	1.1838670933461555	0.010153056136888994	0.13033368465335393	5067.029932490411	4245924.584111147	0.03348613039732534	1.7074572996710626	5.810661845790605e-07	6.23577439779825	-0.07838201289886282	
AWALLQLDGT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	AWALLQLDGTPR	12	0	A0A499FJE4;Q96MK2	A0A499FJE4	FAM65C	Protein FAM65C	1	AWALLQLDGT(1)PR	122.66	0.0024359000000000004	5303900.0	1138.3	1232.3	896.34	1218.8	930.0	797.31	1105.4	1164.8	1557.9	1622.8	True	False	1088.2616949619344	1435.9166294814406	708.2104832108528	1111.9496963090753	1052.3113009740741	951.3788733494258	1353.314088682125	1123.8333237850757	1485.4735690405091	1328.8951947464866	0.8189221386789213	1.0805341423146395	0.5329317812349815	0.8367474731678912	0.7918692949859177	0.7159171596906259	1.0183753346630897	0.8456899597710332	1.1178259767309138	1.0	10.376011613518665	-8.770540771189864	24.999145062701274	0.9826136806963542	0.798765845441626	0.3240401678314351	0.14051091211790875	263.23273146624035	723024.2156057198	0.057744832050223634	0.039549424496901894	1.6961303635359138e-09	8.770540771189864	-0.18384783525472825	
AY(ph)GT(ph)GFVGCLRDVVVGR	ddPTM_K562_Methotrexat_30min_R1	1	AYGTGFVGCLRDVVVGR	17	1	A0A087X208;A0A494C0G5;A0A494C1I6;O00468-2;O00468-6;O00468-3;O00468-5;O00468-4;O00468-7;O00468	A0A087X208	AGRN	Agrin;Agrin N-terminal 110 kDa subunit;Agrin C-terminal 110 kDa subunit;Agrin C-terminal 90 kDa fragment;Agrin C-terminal 22 kDa fragment	2	AY(1)GT(1)GFVGCLRDVVVGR	84.046	0.010076	174230000.0	2526.7	2516.0	2460.9	2576.1	2435.0	2102.3	2304.3	2529.3	2382.3	2286.8	True	False	2415.6292933851555	2931.726235312263	1944.3907201883083	2350.257312653274	2755.245180507387	2508.539721617062	2821.0979324680848	2440.343085379112	2271.547392981067	1872.6383604549333	1.2899603812443048	1.5655592116568828	1.0383161860018417	1.2550513555016085	1.4713172808432888	1.3395751014134114	1.5064830412759116	1.30315769286402	1.2130197911940797	1.0	10.870856601246146	-10.049817488687964	2.200130784786431	1.0018120418936716	1.3506551868400511	0.36933415505067624	0.14032270472641883	0.39005277838393404	4.3115328539208635	0.13616353866841163	0.03756985473205713	8.916255631154244e-11	10.049817488687964	0.3488431449463796	
AY(ph)S(ph)QS(ph)S(ph)QLISHHRIHT(ph)SEK	ddPTM_K562_Methotrexat_30min_R1	1	AYSQSSQLISHHRIHTSEK	19	1	B4DRR6;Q969W8;Q969W8-2	B4DRR6	ZNF566	Zinc finger protein 566	5	AY(0.997)S(0.997)QS(0.99)S(0.997)QLIS(0.019)HHRIHT(0.5)S(0.5)EK	42.382	0.03366	5327900.0	888.04	807.8	1205.6	863.45	647.12	777.1	785.73	848.34	893.37	987.58	True	False	849.0028249090725	941.2752197477134	952.5610354988115	787.7526790926081	732.2276226734863	927.2635768770482	961.9499537725762	818.5034013563107	851.8374236945372	808.7196921541381	1.049810995262938	1.1639078767087954	1.177863040482583	0.9740738190686548	0.9054158440523384	1.1465821666925804	1.1894726480695528	1.012097775406102	1.0533160401047599	1.0	9.659495930977872	-9.041032814308458	0.010144964283385245	2.541509923036259e-07	2.1250344082701424	0.06510561859145592	0.08953334481202435	4036.73457463248	32.789971111916444	3400.5046492736674	3462.515821268431	9.098445242413256e-10	9.041032814308458	2.12503415411915	
AYDPDYERAYS(ph)PEYR	ddPTM_K562_Methotrexat_30min_R1	1	AYDPDYERAYSPEYR	15	1	Q9UDY2-7;A0A3B3ITE1;A0A1B0GTW1;A0A2R8YDH4;Q9UDY2-3;Q9UDY2;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3IRI3;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3ISZ5;A0A3B3IT83	Q9UDY2-7	TJP2	Tight junction protein ZO-2	1	AYDPDYERAYS(1)PEYR	125.39	0.0010933	19165000.0	1099.5	979.94	1199.0	1549.7	806.19	895.53	875.19	921.18	852.27	1306.1	True	False	1051.1672965041275	1141.8584288680047	947.3462853044746	1413.8402070644681	912.2181158411706	1068.5784982636753	1071.473636035561	888.7815772702053	812.6481537237021	1069.5526336322328	0.9828102549140868	1.067603774664384	0.8857406877558314	1.321898672964812	0.852896890864782	0.9990892123137043	1.0017960802890125	0.8309844221989118	0.7598019285539269	1.0	10.062791765212523	-9.225863422522364	5.659903401441828	0.8461759264248988	1.0186034069154706	0.2171298195031076	0.13141613901000854	0.2563515734993066	23.822667023104064	0.06252127999329804	0.03445772101793722	5.944790817551971e-10	9.225863422522364	0.17242748049057177	
AYILVT(ph)PLK	ddPTM_K562_Methotrexat_30min_R1	2	AYILVTPLK	9	0	Q6P0N0	Q6P0N0	MIS18BP1	Mis18-binding protein 1	1	AYILVT(1)PLK;AY(0.078)ILVT(0.922)PLK	125.75	0.006374100000000001	20859000.0	10164.1	7221.700000000001	10444.1	8958.9	6218.7	6690.9	6222.0	7908.700000000001	8059.3	9804.8	True	False	9717.298334149707	8414.963177088466	8252.026137071285	8173.4871465895785	7036.568050932762	7983.821730184834	7617.441885091531	7630.546538306168	7684.624902091393	8029.055709545453	1.2102666472468442	1.0480638672221718	1.0277704422029044	1.0179885957040273	0.8763879969804221	0.9943662142850943	0.9487344664996445	0.9503666202283898	0.9571019532166679	1.0	12.97101460823735	-4.9906071246834065	0.7237605409629456	0.9554647521651611	2.563310365354113	0.8030927550641854	0.03706354387194266	6.152897507204673	0.5919800047939433	0.01403952697635035	12.239260451230109	1.0218634728867056e-05	4.9906071246834065	1.607845613188952	
AYLQSITPQGYS(ph)DSEERESMPR	ddPTM_K562_Methotrexat_30min_R1	4	AYLQSITPQGYSDSEERESMPR	22	1	A0A1B0GWI0;A0A1B0GVV8;A0JP08;A0A1B0GV02;O60315-2;O60315	A0A1B0GWI0	ZEB2	Zinc finger E-box-binding homeobox 2	1	AYLQSIT(0.002)PQGY(0.057)S(0.723)DS(0.147)EERES(0.07)MPR;AYLQS(0.002)IT(0.131)PQGY(0.055)S(0.773)DS(0.037)EERES(0.001)MPR;AYLQSITPQGY(0.047)S(0.947)DS(0.006)EERESMPR;AYLQSIT(0.064)PQGY(0.059)S(0.871)DS(0.005)EERESMPR	98.26700000000001	4.1499e-05	90494000.0	5056.06	4361.54	5260.86	6010.62	4566.3	4860.6	4548.99	5754.79	5365.339999999999	6470.1	True	False	4833.801656355304	5082.2103514959645	4156.677379905671	5483.678276689576	5166.8484877826995	5799.842159012453	5569.216805024513	5552.390773853975	5115.906514484759	5298.302193449128	0.9123303050422196	0.9592148892110492	0.7845300679612097	1.0349878275100368	0.9751894661975001	1.0946605058094712	1.0511323442272407	1.0479566040455381	0.9655746931177529	1.0	12.371314416130504	-7.295409602209876	24.808692616149127	1.0282268245797808	0.8927440533770186	0.5775010537401444	0.05424052196384471	387.40705773463213	282925.0666001943	0.01511794137449156	0.022424842925184235	5.065127684777225e-08	7.295409602209876	-0.1354827712027622	
AYNLNRT(ph)PSTVTLNNNSAPANR	ddPTM_K562_Methotrexat_30min_R1	1	AYNLNRTPSTVTLNNNSAPANR	22	1	Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5	Q9ULH0-2	KIDINS220	Kinase D-interacting substrate of 220 kDa	1	AY(0.015)NLNRT(0.983)PS(0.001)TVTLNNNSAPANR	81.315	0.009689399999999999	9598100.0	740.98	438.35	471.31	531.33	499.44	637.09	477.25	622.82	615.02	632.01	True	False	708.4074064244005	510.77988682397904	372.38847183223675	484.7491238430434	565.1251141489151	760.1986259073458	584.2854612118182	600.9150675822636	586.4278544394978	517.5468646978846	1.3687792444418145	0.9869248983319495	0.7195260897766556	0.9366284618997995	1.0919303210904467	1.4688498332438125	1.1289517936755193	1.1610833889082581	1.1330913090968526	1.0	9.015545696649442	-7.999559768826714	21.33389262194682	1.1959301676533662	0.9856612571632613	0.16097913206158898	0.18507728884992133	3.8764124176340378	187677.63910525193	0.059845325910526666	0.06696738162046566	1.0010141836738872e-08	7.999559768826714	-0.210268910490105	
AYNLNRTPS(ph)TVTLNNNSAPANR	ddPTM_K562_Methotrexat_30min_R1	1	AYNLNRTPSTVTLNNNSAPANR	22	1	Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5	Q9ULH0-2	KIDINS220	Kinase D-interacting substrate of 220 kDa	1	AY(0.001)NLNRT(0.099)PS(0.793)T(0.086)VT(0.018)LNNNS(0.002)APANR	53.777	0.024621	21236000.0	413.03	250.76	339.54	456.78	299.27	203.66	376.27	261.47	288.02	575.54	True	False	394.87369574815807	292.193827808785	268.27519408864185	416.7348065967012	338.6292505833452	243.01441264545045	460.6581256996769	252.27395189739332	274.6300130656957	471.3041289033726	0.8378320314463351	0.6199687418157352	0.569218849647812	0.8842163287776771	0.7184941311065226	0.5156212257484245	0.9774116063263295	0.535267858748411	0.5827023279102245	1.0	8.880514510046572	-12.377760818428822	2.9842438490725263	1.0042718089618603	0.6924234709194886	0.2703842495272716	0.15107971017395258	36253228.78974771	44553520.845338255	1338091.7941354774	0.03797804487530121	4.1902427330123543e-13	12.377760818428822	-0.31184833804237166	
AYRSPLNLALGLTFDR	ddPTM_K562_Methotrexat_30min_R1	1	AYRSPLNLALGLTFDR	16	1	M0R2J8	M0R2J8	DCDC1		0		54.276	0.029585000000000004	13430000.0	5430.1	4436.4	7078.4	6562.2	4484.3	4025.7	3880.6	5043.0	5443.6	6249.8	False	True	5191.399305818153	5169.439694093531	5592.740572059376	5986.90211447277	5074.064050492513	4803.60955016591	4750.92333321861	4865.63483160039	5190.528224166454	5117.900658199775	1.0143610930588542	1.0100703470691996	1.092780213132669	1.169796468182848	0.991434650526671	0.9385898380949784	0.9282953403182608	0.9507091201164268	1.0141908901358445	1.0	12.321336428656583	-7.983248927430581	24.996086982250986	0.9613546850906451	1.0703191577635485	0.5187606615367952	0.04813633763528332	201.99890279863322	301422.97358467185	0.01604800020833726	0.018192517031905525	1.0393242787241922e-08	7.983248927430581	0.10896447267290332	
AYS(ph)GSDLPSSSSGGANGTAGGGGGAR	ddPTM_K562_Methotrexat_30min_R1	2	AYSGSDLPSSSSGGANGTAGGGGGAR	26	0	Q8NHG8	Q8NHG8	ZNRF2	E3 ubiquitin-protein ligase ZNRF2	1	AYS(0.5)GS(0.5)DLPSSSSGGANGTAGGGGGAR;AY(0.001)S(0.771)GS(0.228)DLPSSSSGGANGTAGGGGGAR	318.56	2.3795999999999986e-272	37733000.0	3913.0	3716.8999999999996	5395.6	4549.6	3390.35	3284.8999999999996	3503.2	4223.7	4728.9	4491.9	True	False	3740.9892052939053	4331.054548502447	4263.137295236719	4150.743631709692	3836.240450814464	3919.660434543061	4288.881776254039	4075.150076984051	4509.054471169951	3678.3733825990516	1.0170226935066093	1.177437442591058	1.1589735058990904	1.128418243603338	1.0429176301030831	1.0655961281922721	1.165972382396813	1.107867432996877	1.225828376341708	1.0	11.844852216256196	-8.768325095233514	24.952449406434926	1.1339059874462527	1.103583806966233	0.023576937874964843	0.0705990131735871	641.6050901240634	2325025.851460947	0.028696433973040888	0.019843394602835258	1.7048057628028957e-09	8.768325095233514	-0.030322180480019778	
AYS(ph)PEYR	ddPTM_K562_Methotrexat_30min_R1	2	AYSPEYR	7	0	Q9UDY2-7;A0A3B3ITE1;A0A1B0GTW1;A0A2R8YDH4;Q9UDY2-3;Q9UDY2;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3IRI3;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3ISZ5;A0A3B3IT83	Q9UDY2-7	TJP2	Tight junction protein ZO-2	1	AYS(1)PEYR;AYS(1)PEYR	97.635	0.009164499999999999	109838000.0	13020.900000000001	12091.9	13900.4	11587.6	11718.0	10431.5	11220.8	13287.9	13692.0	13267.4	True	False	12448.516826785431	14089.88094784276	10982.896000205435	10571.73309890961	13259.122392273333	12447.23974030745	13737.350032824668	12820.557025346588	13055.461908532427	10864.54529626543	1.14579271265632	1.296867983300323	1.0108932956430938	0.9730488309109013	1.2204028821004604	1.1456751664136422	1.2644201536484672	1.1800362256995252	1.201657460346739	1.0	13.407340175555051														
AYSGS(ph)DLPSSSSGGANGTAGGGGGAR	ddPTM_K562_Methotrexat_30min_R1	2	AYSGSDLPSSSSGGANGTAGGGGGAR	26	0	Q8NHG8	Q8NHG8	ZNRF2	E3 ubiquitin-protein ligase ZNRF2	1	AYS(0.03)GS(0.97)DLPSSSSGGANGTAGGGGGAR;AYS(0.062)GS(0.933)DLPS(0.004)SSSGGANGTAGGGGGAR	330.05	0.0	43389000.0	2847.3999999999996	2371.93	3702.7	3451.8999999999996	2607.3999999999996	2727.3999999999996	2269.9700000000003	2571.94	2968.6	3271.2	True	False	2722.2317053804904	2763.851116583552	2925.5538703893912	3149.2772864204926	2950.3188023223634	3254.431449716201	2779.0685560754146	2481.4834124105314	2830.5904339518925	2678.7539814239017	1.0162305774468614	1.0317674320784087	1.0921323461120167	1.1756500627752617	1.1013772906290225	1.2149049417320121	1.0374482223254373	0.9263573398746717	1.0566817459090743	1.0	11.387346373838758	-8.993065199745496	24.979487240170883	0.9912922685296593	1.1062278517908686	0.3946481008600359	0.06250150499942676	171.17107037948062	616564.1639609577	0.02750942968903129	0.018500462663202724	1.0160961369772415e-09	8.993065199745496	0.11493558326120923	
AYT(ph)PPPPLGPHPNLGK	ddPTM_K562_Methotrexat_30min_R1	2	AYTPPPPLGPHPNLGK	16	0	J3QS41;P42694	J3QS41	HELZ	Probable helicase with zinc finger domain	1	AY(0.039)T(0.961)PPPPLGPHPNLGK;AY(0.112)T(0.888)PPPPLGPHPNLGK	91.51799999999999	0.017417	17935300.0	4980.2	3726.0	8502.6	6380.3	3867.5	3466.7	3511.2	5107.1	5474.9	6996.0	True	False	4761.276371123103	4341.658168828896	6718.020454903943	5820.949005054805	4376.144039265835	4136.590711568217	4298.675979899287	4927.480398268167	5220.373093998259	5728.956607373938	0.8310896202276519	0.7578444848474848	1.1726429287764104	1.0160574436124128	0.7638640574852931	0.7220495798910168	0.7503418640606062	0.8601008413863419	0.9112258045869882	1.0	12.484056695121408	-7.765417322530505	24.99598230948685	0.8177619351771284	0.9473850614454199	0.14135057248904426	0.12855247548559454	187.01972232302472	1175165.1090820772	0.041908262782154024	0.04928522723456056	1.7162584064119086e-08	7.765417322530505	0.12962312626829153	
AYYEFREEAYHSR	ddPTM_K562_Methotrexat_30min_R1	2	AYYEFREEAYHSR	13	1	H3BQZ7;Q1KMD3	H3BQZ7	HNRNPUL2-BSCL2;HNRNPUL2	Heterogeneous nuclear ribonucleoprotein U-like protein 2	0	;	153.54	3.8273999999999996e-08	54549000.0	5519.200000000001	4805.799999999999	5951.6	6442.200000000001	4611.2	5245.4	5567.700000000001	5719.3	5075.1	6378.9	False	True	5276.58257650348	5599.876765367125	4702.44049342628	5877.422328160751	5217.653624786717	6258.999313023892	6816.398454455823	5518.148977269897	4839.159708734509	5223.619397195194	1.0101391727231743	1.072030012059064	0.9002264782061343	1.125162819350241	0.9988579236052917	1.1982112089530568	1.3049186658039953	1.0563841960294522	0.9263997509720713	1.0	12.350834067882081	-8.233054327698929	24.542137080250793	1.1136902983202779	1.0231482456126881	0.09526851920981949	0.1112046410090941	1279.1383138582337	1105963.0823099837	0.03843563639323668	0.038429270074746176	5.8471693490152435e-09	8.233054327698929	-0.09054205270758975	
CAAPRPPSS(ph)SPEQR	ddPTM_K562_Methotrexat_30min_R1	1	CAAPRPPSSSPEQR	14	1	H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-2;Q5H9R7;Q5H9R7-5	H0YEN2	PPP6R3	Serine/threonine-protein phosphatase 6 regulatory subunit 3	1	CAAPRPPS(0.059)S(0.776)S(0.165)PEQR	74.726	0.03095	10316000.0	813.29	602.97	677.69	946.47	548.3	661.04	683.43	676.81	713.61	815.98	True	False	777.5387454059496	702.6005437624154	535.4521301818094	863.4944445894735	620.4110605635317	788.7766244483379	836.7065746589692	653.0062086804403	680.4344268585902	668.1981149921359	1.1636350476910589	1.051485372374456	0.8013373850779438	1.2922730926884403	0.9284837036255833	1.180453231984381	1.2521833807759493	0.9772643682003288	1.0183124010557831	1.0	9.384132102565337	-6.257975866491088	22.066506195776384	1.0605429325876312	1.1636352467172246	0.04839633262290666	0.14209039025430106	246.27258653487382	1568616.44277495	0.034760194490227436	0.23903898692752998	5.521081187771701e-07	6.257975866491088	0.10309231412959341	
CAKRRGS(ph)T(ph)CVLAGMATDFGNMPEQK	ddPTM_K562_Methotrexat_30min_R1	1	CAKRRGSTCVLAGMATDFGNMPEQK	25	3	H0YB94;P49675	H0YB94	STAR	Steroidogenic acute regulatory protein, mitochondrial	2	CAKRRGS(0.996)T(0.989)CVLAGMAT(0.016)DFGNMPEQK	44.863	0.031306	0.0	278.69	255.88	399.28	529.95	281.87	458.93	367.89	266.9	324.6	373.54	True	False	266.43912129398365	298.1598207836654	315.4765844840456	483.490106300455	318.9408455973786	547.6117273660834	450.3986973812797	257.51297571963977	309.5094168499577	305.8882863233932	0.8710340774942169	0.9747343527513929	1.031345751339152	1.5806100721009515	1.042671000680902	1.790234382454037	1.47242871832335	0.8418530137744151	1.0118380817065227	1.0	8.256861051209196	-7.019951089249503	21.46204511454156	1.2683865959201044	0.9429225304819643	0.18609805569746307	0.28077547481170617	196.78713254111574	211694.80757410981	0.07977145454897162	0.14132476001096125	9.551001444555874e-08	7.019951089249503	-0.3254640654381401	
CAPSAGS(ph)PAAAVGR	ddPTM_K562_Methotrexat_30min_R1	3	CAPSAGSPAAAVGR	14	0	Q7L2J0	Q7L2J0	MEPCE	7SK snRNA methylphosphate capping enzyme	1	CAPS(0.001)AGS(0.999)PAAAVGR;CAPS(0.001)AGS(0.999)PAAAVGR;CAPS(0.029)AGS(0.971)PAAAVGR	198.81	5.398e-09	335690000.0	7070.6	6155.9	9170.2	7728.4	6131.84	6342.9	6183.700000000001	6719.3	6870.599999999999	8392.5	True	False	6759.784890097393	7173.0578425909225	7245.500338197743	7050.863171115074	6938.284438456844	7568.575655351214	7570.5521351399075	6482.978410464508	6551.187305635611	6872.536925012259	0.9835938262471154	1.0437277996259187	1.0542686663243819	1.0259476592193786	1.0095667021017087	1.1012782816496418	1.1015658726528272	0.9433166356473149	0.9532414852211106	1.0	12.746627037784668	-9.27809811057913	24.959481459031846	0.9612092866553222	1.045947521766113	0.494811729613279	0.037052611434211326	708.2975727343218	1061223.6491863024	0.021173802252912682	0.010212547742432201	5.271107694543936e-10	9.27809811057913	0.0847382351107907	
CAPSAGS(ph)PAAAVGRES(ph)PGAAATSSSGPQAQQHR	ddPTM_K562_Methotrexat_30min_R1	1	CAPSAGSPAAAVGRESPGAAATSSSGPQAQQHR	33	1	Q7L2J0	Q7L2J0	MEPCE	7SK snRNA methylphosphate capping enzyme	2	CAPS(0.072)AGS(0.586)PAAAVGRES(0.706)PGAAAT(0.215)S(0.213)S(0.148)S(0.06)GPQAQQHR	56.57	0.004404399999999999	202720000.0	2629.5	2591.1	3123.4	2665.2	2459.5	2544.7	2058.9	2402.4	2704.9	2956.1	True	False	2513.9103284744	3019.235233830527	2467.841023786487	2431.5460539899454	2782.9673599416496	3036.427260428547	2520.660735650104	2317.906230306717	2579.14978939449	2420.7216448053314	1.0384962409325516	1.2472459360660306	1.0194650132873682	1.004471562935723	1.1496436882421686	1.2543479614620165	1.041284833825993	0.9575269570050536	1.0654466592345024	1.0	11.2412214801713	-8.98587911487772	24.989504788521018	1.0067732287298756	1.1190612666094544	0.2695664375740753	0.08433484711589949	315.67919696023597	558651.1655996166	0.03644415144399455	0.024559591518800127	1.0330489131346197e-09	8.98587911487772	0.11228803787957875	
CAPSAGSPAAAVGRES(ph)PGAAATSSSGPQAQQHR	ddPTM_K562_Methotrexat_30min_R1	4	CAPSAGSPAAAVGRESPGAAATSSSGPQAQQHR	33	1	Q7L2J0	Q7L2J0	MEPCE	7SK snRNA methylphosphate capping enzyme	1	CAPSAGSPAAAVGRES(1)PGAAATSSSGPQAQQHR;CAPSAGS(0.001)PAAAVGRES(0.856)PGAAAT(0.073)S(0.041)S(0.012)S(0.016)GPQAQQHR;CAPSAGS(0.001)PAAAVGRES(0.998)PGAAAT(0.001)SSSGPQAQQHR;CAPS(0.001)AGS(0.011)PAAAVGRES(0.985)PGAAAT(0.002)S(0.001)SSGPQAQQHR	139.15	5.7998e-29	931619000.0	3420.38	3008.48	3952.79	3817.56	3321.12	3144.6099999999997	2848.24	2897.19	3821.29	3830.59	True	False	3270.0241906473716	3505.5801845835636	3123.153397071454	3482.880441944268	3757.9054923559283	3752.261377536138	3487.0303238176007	2795.2941855570743	3643.639061967268	3136.8330318239737	1.0424603915707784	1.1175539625534914	0.9956390299981746	1.1103174464848957	1.1979934711956344	1.1961941676424872	1.1116403992309396	0.8911198515184263	1.161566148086818	1.0	11.615093023735108	-9.074724490506153	24.999997241261934	1.016081536102619	1.1129108502461722	0.20454710074471627	0.08364161992921192	212.23475485295967	71004.10410391606	0.03977525666710827	0.022964261757687694	8.419290786484099e-10	9.074724490506153	0.09682931414355322	
CAPSAGSPAAAVGRESPGAAAT(ph)S(ph)SSGPQAQQHR	ddPTM_K562_Methotrexat_30min_R1	1	CAPSAGSPAAAVGRESPGAAATSSSGPQAQQHR	33	1	Q7L2J0	Q7L2J0	MEPCE	7SK snRNA methylphosphate capping enzyme	2	CAPS(0.007)AGS(0.252)PAAAVGRES(0.233)PGAAAT(0.454)S(0.454)S(0.454)S(0.148)GPQAQQHR	61.911	0.0010632	21930000.0	1776.4	1304.4	2037.0	1837.1	1435.0	1293.2	1196.4	1680.5	1737.1	1495.8	True	False	1698.3115830013026	1519.9299289909848	1609.4615372520566	1676.0442952817546	1623.7276525782736	1543.092597628875	1464.7231551468194	1621.395862483533	1656.3426001542255	1224.8961254016492	1.3864943710589486	1.2408643455318242	1.3139575706669058	1.3683154518365153	1.325604366693417	1.2597742499372244	1.195793769587221	1.3237007031529875	1.3522310715213528	1.0	10.25844369452505	-12.441659247657391	3.130975442711317	0.9945763655491826	1.3037711227049478	0.7270429248858837	0.05646876324569653	19521211.592196222	22893239.55093926	922911.43046585	0.01496933371498454	3.6169354016267664e-13	12.441659247657391	0.30919475715576517	
CCS(ph)PPNELGFR	ddPTM_K562_Methotrexat_30min_R1	2	CCSPPNELGFR	11	0	Q9BYW2;H7BZ93;C9JG86;H7BXT4;H7C3H4;Q9BYW2-3;Q9BYW2-2	Q9BYW2	SETD2	Histone-lysine N-methyltransferase SETD2	1	CCS(1)PPNELGFR;CCS(1)PPNELGFR	105.36	0.0037573	30163000.0	3932.9	3408.4	4321.2	3293.5	2980.0	3044.7	2709.5	3231.7	3403.8	3749.2	True	False	3760.014425121493	3971.580167105853	3414.23917269199	3004.763968488626	3371.9222332287513	3633.045184040079	3317.174347099889	3118.0392792550033	3245.55808094235	3070.1835495091977	1.2246871773261152	1.2935969798094817	1.1120635354970205	0.9786919641885808	1.0982803401991357	1.1833315909144457	1.0804482186839206	1.0155872536524586	1.0571218393314588	1.0	11.584109193694307	-6.869561651034823	4.881816665620421	1.0660517700797454	1.2578709565231552	0.6551944468655021	0.056928071786599775	0.12622529083287481	4.826495749295341	0.01589236654258965	0.03502126738634387	1.3503251264772442e-07	6.869561651034823	0.19181918644340978	
CDAKMEVNS(ph)ES(ph)T(ph)ALQRLLAQPNK	ddPTM_K562_Methotrexat_30min_R1	1	CDAKMEVNSESTALQRLLAQPNK	23	2	F8VRB8;H0YHC1;A0A3B3IS46;A0A3B3IRX3;Q71F56	F8VRB8	MED13L	Mediator of RNA polymerase II transcription subunit 13-like	3	CDAKMEVNS(1)ES(1)T(1)ALQRLLAQPNK	41.912	0.031296	16201000.0	118.1	64.439	118.63	132.27	110.46	159.29	116.68	129.05	0.0	64.444	True	False	112.90846540894711	75.08644947427942	93.73118417487062	120.67409446242317	124.98742613504959	190.07053810416278	142.84846016594017	124.5112383537637	0.0	52.772567124872204	2.139529523772822	1.422831095114387	1.7761346336076616	2.2866822865918217	2.3684166403976556	3.6016920998823414	2.706869647404633	2.359393244204722	0.0	1.0	5.7217162601170966	-7.2398794215058375	9.970900498276805	2.208571546939438	1.7433790249966965	0.0	0.9403545971252929	1.8633970172664562	836.6058069154385	0.26390431072134035	0.4485981610606401	5.755997259531912e-08	7.2398794215058375	-0.4651925219427413	
CDQYWPT(ph)ENS(ph)EEY(ph)GNIIVT(ph)LK	ddPTM_K562_Methotrexat_30min_R1	1	CDQYWPTENSEEYGNIIVTLK	21	0	P23470-2;P23470	P23470-2	PTPRG	Receptor-type tyrosine-protein phosphatase gamma	4	CDQY(0.035)WPT(0.971)ENS(0.995)EEY(1)GNIIVT(1)LK	45.257	0.031201999999999997	5547200.0	1051.3	835.79	1049.4	953.12	698.66	976.49	965.93	1113.5	1237.9	1611.5	True	False	1005.086110791076	973.8900914990609	829.1452808995134	869.5614494142644	790.5460360629523	1165.1828724548554	1182.5643908817842	1074.3375738621914	1180.3502991945868	1319.6417342457255	0.7616355899546919	0.7379958258562597	0.6283108963459937	0.6589375183039995	0.5990611054104081	0.882953942890299	0.8961253347733116	0.8141130626459432	0.8944475372092152	1.0	10.3659305942593	-8.276006929322332	24.264375769173068	0.8858224054664026	0.6768370622541902	0.7604267028652498	0.061662789550391034	289.1334835316722	481592.1687232092	0.02224645918063284	0.019712775965619118	5.2965499299116656e-09	8.276006929322332	-0.2089853432122124	
CETSAS(ph)ELER	ddPTM_K562_Methotrexat_30min_R1	2	CETSASELER	10	0	H3BTQ3;P41440-3;P41440-2;P41440	H3BTQ3	SLC19A1	Folate transporter 1	1	CET(0.008)S(0.031)AS(0.961)ELER;CETS(0.003)AS(0.996)ELER	102.05	0.0056648	40135000.0	2652.1	2290.4	2597.1	2460.3	1817.94	1907.31	1811.63	1974.74	2268.6	2721.3	True	False	2535.5168595348755	2668.849669856603	2052.004201471436	2244.6093188621753	2057.0309747234473	2275.8706637670343	2217.934143730051	1905.2872749067135	2163.133281163937	2228.4462000638496	1.137795859492694	1.1976280467440206	0.9208228591799262	1.0072530890796747	0.9230785893168564	1.0212814039225295	0.9952827865741172	0.8549846412500886	0.9706912740823445	1.0	11.121822415979267	-6.759876342697565	24.999999528607905	0.9600737211236211	1.1677120127125453	0.7335697306611797	0.04966060065762641	18.824291011942066	301057.9828947566	0.012734629578645034	0.03023823846152624	1.7382957057688523e-07	6.759876342697565	0.20763829158892422	
CGGVEQAS(ph)SSPRSDPLGSTQDHALSQESSEPGCR	ddPTM_K562_Methotrexat_30min_R1	2	CGGVEQASSSPRSDPLGSTQDHALSQESSEPGCR	34	1	Q5VZL5-2;Q5VZL5-4;Q5VZL5;H7C1I7;Q5VZL5-3	Q5VZL5-2	ZMYM4	Zinc finger MYM-type protein 4	1	CGGVEQAS(0.238)S(0.238)S(0.238)PRS(0.238)DPLGS(0.023)T(0.023)QDHALSQESSEPGCR;CGGVEQAS(0.222)S(0.189)S(0.189)PRS(0.189)DPLGS(0.05)T(0.161)QDHALSQESSEPGCR	52.068999999999996	0.0031159000000000004	85711000.0	1576.65	1481.63	2004.46	1893.6200000000001	1332.13	1423.44	1238.67	1473.63	1325.77	2004.8600000000001	True	False	1507.3423538274053	1726.4441740960685	1583.7512385666462	1727.6092746347151	1507.3284444802077	1698.4996343712075	1516.4732786573977	1421.8015976385655	1264.1352420738408	1641.7604265093917	0.9181256470118617	1.051581062753916	0.964666472034485	1.0522907281349507	0.9181171747969313	1.0345599802173642	0.9236873140386435	0.8660225783743071	0.769987643545268	1.0	10.681027902214042	-9.013543731764647	3.7298769332355373	0.86579635983893	0.9910668196154336	0.3399997479068756	0.06933048784092337	0.22279609098772887	6.737004662185427	0.03131117667353883	0.01851310533416061	9.692956600841067e-10	9.013543731764647	0.12527045977650364	
CGGVEQASSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	CGGVEQASSSPR	12	0	Q5VZL5-2;Q5VZL5-4;Q5VZL5;H7C1I7;Q5VZL5-3	Q5VZL5-2	ZMYM4	Zinc finger MYM-type protein 4	1	CGGVEQAS(0.016)S(0.113)S(0.871)PR	89.189	0.019254	1650300.0	1034.1	744.74	1050.4	1104.5	890.72	967.26	780.89	841.87	1076.5	1210.4	True	False	988.6422021963782	867.7956265844417	829.9353945653214	1007.6701998468772	1007.8652924770178	1154.169305584987	956.024460567201	812.2609549235411	1026.4537499660491	991.1848309841922	0.997434758171905	0.8755134254049955	0.8373164808638577	1.0166319826003751	1.0168288102999545	1.164433987996931	0.9645269284618905	0.8194848524033711	1.0355825854869438	1.0	9.95301029852913	-7.279741816338032	24.432384632041448	1.0007392569640208	0.9006307375546992	0.21147180047675818	0.08757688722279343	998.0390074401186	1332304.6350748888	0.026652838672030287	0.039619606246367026	5.25119545715408e-08	7.279741816338032	-0.10010851940932153	
CGLGQENSDNEHLVENEVSLLLEES(ph)DLRRSPR	ddPTM_K562_Methotrexat_30min_R1	1	CGLGQENSDNEHLVENEVSLLLEESDLRRSPR	32	2	P46100-4;P46100;A0A096LNW1;A0A096LNL9;P46100-6;P46100-2;P46100-5;P46100-3	P46100-4	ATRX	Transcriptional regulator ATRX	1	CGLGQENSDNEHLVENEVS(0.207)LLLEES(0.396)DLRRS(0.396)PR	67.388	4.4603999999999995e-05	11087000.0	697.8	377.99	705.28	725.1	367.08	384.84	585.44	623.64	557.65	782.12	True	False	667.1255475221282	440.4464227685543	557.2513662214678	661.531608790376	415.3574541522181	459.20488344532635	716.739822759239	601.7062277174829	531.7249732174338	640.4704891022444	1.0416179338055787	0.6876919862239611	0.8700656403428894	1.0328838253229329	0.648519270160956	0.7169805498595253	1.1190832910410944	0.9394753356409943	0.8302099507547325	1.0	9.32298828695102	-8.751057705964255	24.99999731365036	0.9671484452757988	0.8287472189972689	0.1901658634736415	0.14044388498125085	371.0818655965308	893599.6999963182	0.05476872397616243	0.041956808213091244	1.7739537548621298e-09	8.751057705964255	-0.1384012262785299	
CGSGPVHISGQHLVAVEEDAES(ph)EDEEEEDVK	ddPTM_K562_Methotrexat_30min_R1	13	CGSGPVHISGQHLVAVEEDAESEDEEEEDVK	31	0	P06748;P06748-3;P06748-2;E5RI98	P06748	NPM1	Nucleophosmin	1	CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK	130.45	4.1316e-24	942266600.0	29484.84	22719.89	42985.5	29625.499999999996	23952.56	22040.66	17818.73	28805.28	29539.399999999998	36517.850000000006	True	False	28188.721737750555	26473.965650400954	33963.43098161428	27028.27841155605	27102.741478773707	26299.70560845564	21815.033789960937	27792.18197541188	28166.119741520775	29904.1134997985	0.9426369297969825	0.8852951166928704	1.1357444514060961	0.9038314548845654	0.9063215158996882	0.8794678233358382	0.7294994312440638	0.9293765546870049	0.9418811141721545	1.0	14.868056329443583	-7.4955621831668875	24.69534359607936	0.8867334274674195	0.9846583808765734	0.17150864793888343	0.08792831922077897	1023.4642752936746	925255.5992227809	0.025130837961112255	0.03715587549438557	3.194756900270377e-08	7.4955621831668875	0.09792495340915397	
CGSGPVHISGQHLVAVEEDAES(ph)EDEEEEDVKLLSISGK	ddPTM_K562_Methotrexat_30min_R1	2	CGSGPVHISGQHLVAVEEDAESEDEEEEDVKLLSISGK	38	1	P06748;P06748-3;P06748-2;E5RI98	P06748	NPM1	Nucleophosmin	1	CGSGPVHISGQHLVAVEEDAES(0.999)EDEEEEDVKLLSISGK;CGSGPVHISGQHLVAVEEDAES(0.747)EDEEEEDVKLLS(0.228)IS(0.024)GK	70.788	5.708200000000001e-06	42916000.0	4119.9	2369.2	7251.5	4268.7	2613.3500000000004	2323.76	1658.4699999999998	3393.5	3895.1	5537.2	True	False	3938.7941290289696	2760.670030485619	5729.509247610839	3894.4696985843025	2957.0513316135425	2772.7937323430824	2030.42411494178	3274.148681545891	3714.017651177667	4534.359423434959	0.8686550317718693	0.6088335248012388	1.2635763318626616	0.8588797964397108	0.6521431266190755	0.6115072656156092	0.4477863189335909	0.722075242783818	0.8190832054429752	1.0	12.146683037861486	-5.930308102618388	18.850214860996328	0.7642679224323435	3.020188516922368	0.013377366727541085	0.21882483814440304	979.9477489128805	296474.03542199667	0.05598583804990166	10846.635831906326	1.1740643400241501e-06	5.930308102618388	2.2559205944900245	
CGSGPVHISGQHLVAVEEDAES(ph)EDEEEEDVKLLSISGKR	ddPTM_K562_Methotrexat_30min_R1	1	CGSGPVHISGQHLVAVEEDAESEDEEEEDVKLLSISGKR	39	2	P06748;P06748-3;P06748-2;E5RI98	P06748	NPM1	Nucleophosmin	1	CGSGPVHIS(0.001)GQHLVAVEEDAES(0.95)EDEEEEDVKLLS(0.024)IS(0.024)GKR	41.011	0.004653	25493000.0	2464.0	1313.8	3357.9	2582.3	1095.1	1249.9	915.6	1574.6	1816.4	2988.1	True	False	2355.6855103102953	1530.8831192183047	2653.1226784185965	2355.913768279392	1239.12484483517	1491.4254854441156	1120.9466071986192	1519.220425508223	1731.9559604629183	2446.9261347189904	0.9627121460210432	0.625635198993906	1.084267579954262	0.962805429576218	0.5064005926674503	0.6095098108122474	0.4581039825002118	0.6208689359079052	0.7078088446923304	1.0	11.256754836147625	-7.7549708789445795	24.99823485113154	0.6198279555827149	0.9011545943401227	0.333590786219764	0.17562202054821557	164.41836344566786	635409.3508894618	0.051008970210196014	0.06425948992646886	1.7580414932076477e-08	7.7549708789445795	0.2813266387574078	
CHT(ph)FISS(ph)YQVHKK	ddPTM_K562_Methotrexat_30min_R1	1	CHTFISSYQVHKK	13	1	P61244-5	P61244-5	MAX	Protein max	2	CHT(1)FIS(0.002)S(0.606)Y(0.392)QVHKK	82.645	0.022147	0.0	1316.7	1262.9	1373.2	1171.1	1378.3	1148.2	1352.7	1269.8	1362.5	1262.5	True	False	1258.8194445720642	1471.5727593703732	1084.9840858883274	1068.4314812500468	1559.5706087446933	1370.0733997815298	1656.077408865849	1225.140414270509	1299.1576723908422	1033.8490161248703	1.217604722680339	1.4233923294585151	1.0494608680435025	1.0334502084789907	1.508509061207372	1.3252161373784677	1.6018561540767813	1.185028369870339	1.2566222457321827	1.0	10.013809793726274	-10.278975435094395	1.8044823045793095	1.0009709452389433	1.2991441435190514	0.20249572658071557	0.174141836151451	1.9318660258559235	9.705898293727909	0.17482664256690053	0.049197923613222845	5.260470202339637e-11	10.278975435094395	0.29817319828010813	
CIACQAAKLS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	CIACQAAKLSPR	12	1	P49790-2;P49790;P49790-3	P49790-2	NUP153	Nuclear pore complex protein Nup153	1	CIACQAAKLS(1)PR	91.712	0.011581999999999999	69596000.0	4203.3	3583.5	5580.1	5464.9	3806.4	3230.3	3030.7	4524.6	5177.6	6703.8	True	False	4018.5279648893106	4175.612465914748	4408.913266578399	4985.8007018046155	4307.0083183093675	3854.5097572846835	3710.411623456589	4365.467253432305	4936.894506107031	5489.676858849824	0.7320153932942525	0.7606299192607862	0.8031280128029498	0.9082138766996972	0.7845649988243124	0.7021378227519689	0.6758888945303021	0.7952138833809138	0.8993051199631793	1.0	12.422505514428902	-9.92262630444368	2.622012088018408	0.9973020817731756	0.7695781337702381	0.6143828643158289	0.05976334920804845	0.18800581132429164	2.7547210612272273	0.06459342214231518	0.017628326724732652	1.19501593255648e-10	9.92262630444368	-0.2277239480029375	
CLS(ph)PDDSTVK	ddPTM_K562_Methotrexat_30min_R1	2	CLSPDDSTVK	10	0	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	CLS(0.996)PDDS(0.003)T(0.001)VK;CLS(0.997)PDDS(0.001)T(0.001)VK	123.67	0.0030258000000000004	179817000.0	6187.5	4820.5	8744.0	6756.400000000001	4778.1	4275.0	4106.1	5457.6	5255.0	7527.599999999999	True	False	5915.504908703309	5617.005690509847	6908.753893830136	6164.07690198772	5406.50390019809	5101.083246878625	5026.997448469034	5265.65311460287	5010.696197001013	6164.278696064614	0.959642676843906	0.9112186465702539	1.1207724754951147	0.9999672639595248	0.8770699974434477	0.8275231374816404	0.8155045701743431	0.8542204812972777	0.8128600999497202	1.0	12.589716374344285	-7.8096469432823215	4.491199028584826	0.8506844821655664	1.0011647838085018	0.4582625560644127	0.07053136478884543	0.17263363573316737	7.375412029984284	0.021997647231873144	0.025901819901566512	1.5500762306773653e-08	7.8096469432823215	0.15048030164293547	
CLSPGGHPT(ph)YRPAYLLENEEEERNSRT	ddPTM_K562_Methotrexat_30min_R1	1	CLSPGGHPTYRPAYLLENEEEERNSRT	27	3	Q5T190;Q8NFF5-2;Q8NFF5	Q5T190	FLAD1	FAD synthase;Molybdenum cofactor biosynthesis protein-like region;FAD synthase region	1	CLS(0.021)PGGHPT(0.777)Y(0.188)RPAY(0.014)LLENEEEERNSRT	48.077	0.015444999999999999	19649000.0	531.0	328.69	700.98	845.94	275.47	456.95	447.92	571.98	388.04	720.97	True	False	507.6578758014471	383.00043572527346	553.8538774584913	771.7777536065797	311.6991334186323	545.249120388582	548.3774620974284	551.8631391986498	370.0001050969122	590.3953466578595	0.8598609028259168	0.6487185881348526	0.938106779793872	1.307221945388796	0.5279498478148835	0.9235322118901452	0.928830935409149	0.9347349065717832	0.6266988843855696	1.0	9.205537540271804														
CLVAGLLS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	CLVAGLLSPR	10	0	Q8WYP5;Q8WYP5-3;Q8WYP5-2	Q8WYP5	AHCTF1	Protein ELYS	1	CLVAGLLS(1)PR	110.38	0.0029156	22707000.0	2619.2	1988.4	3013.1	2908.6	2343.0	2006.7	1945.5	2958.2	2822.4	3164.8	True	False	2504.063104141527	2316.9493029788987	2380.6914864478	2653.6075538928258	2651.145567937908	2394.4663746225347	2381.827898978716	2854.1584292762795	2691.1872400410375	2591.624052460982	0.9662138695478197	0.8940144311358529	0.9186098902682731	1.023916856834611	1.0229668787879957	0.9239250470564092	0.9190483846285322	1.1013011036712663	1.0384172957051818	1.0	11.339640737071504	-8.031654623026256	0.44137755566227005	1.0344197461393094	0.9171655703973077	0.23745636526674008	0.055576691252632184	2.1198578607069765	0.8232072849602873	0.057852694714124	0.1071386837811302	9.297054503038724e-09	8.031654623026256	-0.1172541757420017	
CMTISIRINS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	CMTISIRINSR	11	1	Q99445	Q99445	GML	Glycosyl-phosphatidylinositol-anchored molecule-like protein	1	CMTISIRINS(1)R	74.69800000000001	0.029876999999999997	0.0	702.68	514.85	630.34	622.62	621.19	399.28	391.06	635.36	720.34	779.33	True	False	671.7910285652753	599.9202115463111	498.0402481057735	568.0358712799118	702.8873731742844	476.4352090792274	478.7651596888289	613.0140286745237	686.8515506275374	638.1857851378973	1.0526574615260613	0.9400400722129562	0.7804000961854054	0.8900791658297001	1.1013836245544182	0.7465462568651239	0.7501971539296801	0.9605573219435866	1.0762564234788223	1.0	9.317832664359587	-9.523391781599125	19.64018312077476	1.031555797036658	0.8911826933430447	0.20402147102049972	0.11345047939172653	2.0400939292778393	77586.1839330103	0.07749518715291531	0.030297856084955322	2.9964581630757683e-10	9.523391781599125	-0.14037310369361333	
CPAPTPSLLNIPLS(ph)SPGRRPR	ddPTM_K562_Methotrexat_30min_R1	1	CPAPTPSLLNIPLSSPGRRPR	21	2	Q12809-7;Q12809-4;Q12809;Q12809-2	Q12809-7	KCNH2	Potassium voltage-gated channel subfamily H member 2	1	CPAPTPSLLNIPLS(0.5)S(0.5)PGRRPR	68.08800000000001	0.034225	56062000.0	482.29	482.11	664.58	601.34	406.97	561.56	530.86	479.61	658.82	823.43	True	False	461.08910907774	561.7704830311592	525.0937400230591	548.6214558405801	460.4936883413106	670.073522366587	649.9188683895354	462.74184445446417	628.1916019996589	674.2988478001597	0.6838052750379189	0.8331179637394986	0.7787255483768525	0.8136176676415939	0.6829222530093748	0.9937337495869117	0.9638439551095752	0.6862563178983895	0.9316219418868628	1.0	9.397244322255464	-8.258439507661965	24.99973210759246	0.8985292594227973	0.7667792967522645	0.39736599868902434	0.09509743080535236	341.0826199491384	2842451.690488247	0.03252161071399205	0.031189415905678284	5.515190174296209e-09	8.258439507661965	-0.13174996267053274	
CPAPTPSLLNIPLSS(ph)PGR	ddPTM_K562_Methotrexat_30min_R1	1	CPAPTPSLLNIPLSSPGR	18	0	Q12809-7;Q12809-4;Q12809;Q12809-2	Q12809-7	KCNH2	Potassium voltage-gated channel subfamily H member 2	1	CPAPTPS(0.001)LLNIPLS(0.094)S(0.906)PGR	116.04	0.00045487	18930000.0	1394.3	981.2	1392.6	1355.1	1342.9	1071.5	1008.3	1654.3	1275.7	1582.5	True	False	1333.0082414876802	1143.3266224516667	1100.312291005014	1236.300486928477	1519.5148882560031	1278.55221029952	1234.4369419379275	1596.1173313338334	1216.392985445136	1295.8939152614712	1.0286399417337495	0.8822686864927357	0.849075898919554	0.9540136521738587	1.1725611721461107	0.9866179594195779	0.9525756139451094	1.231672834123761	0.9386516682576641	1.0	10.339731905515459	-7.5384937349791485	24.749152065576773	1.051985438112425	0.913775968267705	0.26555070532552616	0.09741707123469746	253.43940441814505	401689.16219051153	0.027962694465787922	0.03611194639081864	2.8940515656098203e-08	7.5384937349791485	-0.13820946984471993	
CPFPAGAALACCS(ph)EDEEDDEEHEGGGSR	ddPTM_K562_Methotrexat_30min_R1	1	CPFPAGAALACCSEDEEDDEEHEGGGSR	28	0	Q147X3	Q147X3	NAA30	N-alpha-acetyltransferase 30	1	CPFPAGAALACCS(1)EDEEDDEEHEGGGSR	92.88600000000001	1.3745999999999998e-05	11489000.0	591.74	792.38	896.86	800.18	1015.9	897.67	540.65	892.26	962.53	666.31	True	False	565.7278181294702	923.3073268428984	708.6213423170739	730.0294617595958	1149.5086566231848	1071.1320229767332	661.9045251004075	860.8787100622176	917.7821903899871	545.6348023240894	1.0368250260426868	1.6921708859298235	1.2987099417023178	1.337945194569869	2.1067363220361703	1.9630932968614336	1.2130907381293792	1.5777562325485308	1.6820448154713825	1.0	9.091791856752447	-6.252630297332464	23.971091811443614	1.5659991888243647	1.0368245337820736	0.17580349340427415	0.3237215095129709	1130.923499257295	3077325.6176987826	0.0814238768122882	0.9171077384636172	5.589458071022807e-07	6.252630297332464	-0.5291746550422911	
CPFTGNVS(ph)IR	ddPTM_K562_Methotrexat_30min_R1	1	CPFTGNVSIR	10	0	P62280;M0QZC5	P62280	RPS11	40S ribosomal protein S11	1	CPFTGNVS(1)IR	84.352	0.023014	17408000.0	1029.7	1046.2	1571.3	777.6	744.81	934.29	700.31	1157.3	909.61	1039.0	True	False	984.4356209279664	1219.066767640577	1241.5056030850046	709.4290153018845	842.7655699768815	1114.8283197020426	857.3723443504421	1116.5971030361152	867.3224296392185	850.8270318841509	1.1570337848198595	1.4328021113068794	1.4591750809041628	0.8338110905231333	0.990525145998926	1.3102878469120365	1.0076928825965914	1.3123667457572643	1.0193874866887325	1.0	9.732722060103967	-7.239924124795491	24.976173290888006	1.0851285699849456	1.3579835129205573	0.3987261053951544	0.15755241611515472	856.4822297708301	994254.0935800049	0.04309113281387198	0.07454500423351912	5.7554048072191476e-08	7.239924124795491	0.27285494293561174	
CQTAEADS(ph)ES(ph)DHEVPEPESEMK	ddPTM_K562_Methotrexat_30min_R1	3	CQTAEADSESDHEVPEPESEMK	22	0	Q9BPX3	Q9BPX3	NCAPG	Condensin complex subunit 3	2	CQT(0.019)AEADS(0.966)ES(0.977)DHEVPEPES(0.038)EMK;CQT(0.02)AEADS(0.974)ES(0.945)DHEVPEPES(0.061)EMK;CQT(0.014)AEADS(0.979)ES(0.982)DHEVPEPES(0.025)EMK	63.931999999999995	0.0084491	28020000.0	6563.200000000001	4524.6	8589.2	6571.0	4265.76	4524.74	4027.6	4811.1900000000005	5477.5	7490.9	True	False	6274.689586553788	5272.213244949869	6786.444298362967	5994.930632135655	4826.782209938883	5399.081967364112	4930.891825200041	4641.977720691551	5222.852220565757	6134.225421694882	1.0228984354507298	0.859474975651149	1.1063245694169284	0.9772921958383558	0.7868609120343097	0.8801570852400056	0.8038328372741215	0.7567341272256304	0.8514281529488831	1.0	12.582665468675842	-7.714012944460514	8.109134605102438	0.8339703645250838	0.9909856183911895	0.411425852285624	0.08418596429966171	0.23201153146047349	34.94562675256615	0.024002953108624908	0.030852844749797433	1.931910734164864e-08	7.714012944460514	0.1570152538661057	
CQVFEETQIGGER	ddPTM_K562_Methotrexat_30min_R1	2	CQVFEETQIGGER	13	0	Q99832-2;Q99832-4;Q99832-3;Q99832	Q99832-2	CCT7	T-complex protein 1 subunit eta	0	;	158.01	1.6643e-06	24452000.0	564.49	626.63	836.3299999999999	463.98	574.1700000000001	580.3299999999999	457.97	610.5600000000001	701.13	648.87	False	True	539.675695501241	730.1699566111781	660.795762125681	423.30359377542214	649.6834190110578	692.4705592189646	560.6814304267713	589.0862587312978	668.5346193345995	531.3533553211446	1.0156625343507362	1.3741702189306226	1.2436089007592748	0.7966517752006699	1.2226956177182615	1.303220450730837	1.0551950501712766	1.1086525620512173	1.258173327861163	1.0	9.053527776653812	-12.592798081291402	2.5472668046472347	0.9859077044994011	1.1540672323127708	0.07695114983200535	0.15905896156605595	34046921.773944564	30740535.280978844	3230317.6761601223	0.04247612736319168	2.5538884188074213e-13	12.592798081291402	0.16815952781336962	
CRLFPDER	ddPTM_K562_Methotrexat_30min_R1	1	CRLFPDER	8	1	F8VWT9;J3KPF0;Q9Y4D8-2;Q9Y4D8-4;Q9Y4D8;Q9Y4D8-3;Q9Y4D8-5	F8VWT9	HECTD4	Probable E3 ubiquitin-protein ligase HECTD4	0		76.47800000000001	0.018379	0.0	0.0	0.0	157.7	0.0	0.0	0.0	0.0	0.0	0.0	149.51	False	True	0.0	0.0	124.60092509801142	0.0	0.0	0.0	0.0	0.0	0.0	122.43229021847874	0.0	0.0	1.0177129323944099	0.0	0.0	0.0	0.0	0.0	0.0	1.0	6.935840293511062	-12.662002710358031	4.669292655998977	1.0232491552087197	0.11973093682285449	0.4344574493241061	0.30348898534058544	0.07384231855642823	0.005345237599737411	0.29541391713838694	0.07418764480838502	2.17769618167909e-13	12.662002710358031	-0.9035182183858652	
CRNS(ph)IASCADEQPHIGNYR	ddPTM_K562_Methotrexat_30min_R1	1	CRNSIASCADEQPHIGNYR	19	1	J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;H0YKJ3;H0YNV4;P27448-6;P27448-7	J3KNR0;P27448-6	MARK3	MAP/microtubule affinity-regulating kinase 3	1	CRNS(0.959)IAS(0.041)CADEQPHIGNYR	65.064	0.020178	9042900.0	696.97	613.39	819.94	871.62	494.71	853.24	527.39	586.71	819.76	673.66	True	False	666.3320333283144	714.7422716526988	647.8457991430786	795.2064278773519	559.7730362418106	1018.1165542846129	645.6706325584094	566.0750767496065	781.6495365277922	551.6536461011326	1.207881137082448	1.2956359061599818	1.1743705560940159	1.4414958253200227	1.0147182751316204	1.8455720568154559	1.17042756287709	1.0261421831440776	1.416920819887947	1.0	9.107618949746216	-11.80239378285211	8.30638084025979	1.000000000402276	1.286701625035238	0.1240322348123889	0.22968478951208202	2.7091923747277815e-10	4.037611110791673e-18	0.21458029246474353	0.05204336535341567	1.5761814686471407e-12	11.80239378285211	0.2867016246329621	
CRS(ph)PGMLEPLGSSR	ddPTM_K562_Methotrexat_30min_R1	1	CRSPGMLEPLGSSR	14	1	Q9UQ35	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	CRS(1)PGMLEPLGSSR	117.02	0.0019087	819790000.0	5199.9	4876.0	5924.4	5193.1	4596.2	4397.2	4468.1	4966.9	5561.9	6058.3	True	False	4971.318622184457	5681.676122171148	4680.94940171629	4737.8289858078915	5200.680861867778	5246.896667409285	5470.1851634165005	4792.211311734279	5303.328482987616	4961.083163872715	1.0020631499157842	1.1452491188911906	0.943533750009192	0.9549989043339183	1.0482954407496827	1.0576111091259068	1.10261912222136	0.965960689115598	1.0689860072508315	1.0	12.276439426351681	-6.758389280739356	24.999601096091517	1.0198393022887298	1.0736560888304723	0.12400591235312075	0.05922736201833038	172.72833848521304	1415670.4209470486	0.015442370783101768	0.03743847971915255	1.744257982822445e-07	6.758389280739356	0.05381678654174249	
CRSPGMLEPLGSS(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	CRSPGMLEPLGSSR	14	1	Q9UQ35	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	CRSPGMLEPLGS(0.001)S(0.999)R;CRSPGMLEPLGSS(1)R	98.25299999999999	0.011736	864940000.0	1946.79	1683.14	2704.7799999999997	2528.9900000000002	2113.91	1914.8500000000001	2101.82	2334.26	2147.16	2362.85	True	False	1861.2114426205271	1961.2502765117201	2137.0836410057013	2307.2773732102783	2391.9262174646265	2284.8676620550964	2573.2066382068597	2252.1627527288365	2047.3390002574101	1934.9149685153657	0.9619086486516819	1.0136105763947658	1.1044845255631346	1.1924438079987676	1.236191903202816	1.1808620529760254	1.329880992228432	1.163959548288001	1.0581028280681015	1.0	10.918054451963721	-6.838523827840466	2.0530053300751803	1.1830081637700836	0.9680178344812052	0.3944611906842015	0.08631906755915884	0.3120038486960324	2.54368371152582	0.024437744848219273	0.0813446950871601	1.4503611971408116e-07	6.838523827840466	-0.2149903292888784	
CS(ph)GT(ph)RTASFPS(ph)Y(ph)CRR	ddPTM_K562_Methotrexat_30min_R1	1	CSGTRTASFPSYCRR	15	2	H3BUU8	H3BUU8	VAC14		4	CS(0.5)GT(0.5)RT(0.536)AS(0.464)FPS(1)Y(1)CRR	45.33	0.031687	15337000.0	648.42	540.38	674.16	589.49	602.75	396.07	500.45	686.23	566.32	783.51	True	False	619.9162331961854	629.668610110509	532.6630289415053	537.8103269422681	682.022189959272	472.60492200964114	612.6886517830372	662.0949019411333	539.9919068098219	641.6087466328688	0.9661904337331362	0.9813903152271208	0.8301991388628892	0.838221626130676	1.0629876751813172	0.7365936397997199	0.9549256536766326	1.0319293579081876	0.8416217977757829	1.0	9.32554999902057	-13.019234155027409	0.42642967198903176	1.0868805136262016	0.9144061766686085	0.05955437536864605	0.09738041434643832	174.45574313265908	11.477966134339585	14.9169463419994	0.05629605094895931	9.56678127845107e-14	13.019234155027409	-0.17247433695759318	
CS(ph)GTRT(ph)ASFPS(ph)Y(ph)CRR	ddPTM_K562_Methotrexat_30min_R1	1	CSGTRTASFPSYCRR	15	2	H3BUU8	H3BUU8	VAC14		4	CS(0.5)GT(0.5)RT(0.555)AS(0.445)FPS(1)Y(1)CRR	41.283	0.03335	11635000.0	922.7	889.82	1048.0	758.38	811.61	860.15	854.65	789.94	625.67	855.88	True	False	882.1392128097846	1036.8476306460884	828.0391217673807	691.8940028609095	918.3509408425464	1026.3618139889234	1046.3270181763864	762.1573624577456	596.5827382640574	700.8718383532314	1.2586312711357601	1.479368372229459	1.1814415652838066	0.9871904747757932	1.3102979611797556	1.4644072679542428	1.4928935090826827	1.0874418413621965	0.8512008981068326	1.0	9.45300684645504	-9.498459109330545	5.925945752630867	0.9360582663309555	1.305463032868425	0.5277068093609643	0.1486776063270727	0.14406320795077618	17.543575516331913	0.09895264946424434	0.04288190750333223	3.173517449912375e-10	9.498459109330545	0.36940476653746945	
CS(ph)MLSELSIITFDGNNAALYSMASYILVR	ddPTM_K562_Methotrexat_30min_R1	1	CSMLSELSIITFDGNNAALYSMASYILVR	29	0	A0A2R8YF04;A0A0A0MSS2;Q3ZCN5	A0A2R8YF04	OTOGL	Otogelin-like protein	1	CS(0.508)MLS(0.471)ELS(0.008)IIT(0.008)FDGNNAALY(0.002)S(0.002)MAS(0.002)YILVR	40.756	0.017388	7107500.0	527.72	519.54	513.01	560.72	428.73	546.35	445.26	617.24	669.68	643.13	True	False	504.52206067408633	605.3851543299418	405.33621169645403	511.56254817396206	485.11550974904776	651.9244051303243	545.1208893853832	595.5313193450372	638.5467229700549	526.6529249428818	0.9579782752157018	1.149495475403652	0.7696457999173076	0.9713466382617046	0.9211294322568531	1.2378634471668963	1.035066670225945	1.1307851739542236	1.2124621220689291	1.0	9.040708699225462	-8.244325470304144	24.9395211121609	1.12589900949468	0.955515257023242	0.37816946460912115	0.10852144249806824	866.7447847056837	1263079.1966460221	0.035252196070434956	0.03516473815624377	5.697371380932043e-09	8.244325470304144	-0.1703837524714379	
CS(ph)MRY(ph)LALMVS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	CSMRYLALMVSR	12	1	Q6ZN54-4;Q6ZN54-6;Q6ZN54-3;Q6ZN54-5;Q6ZN54	Q6ZN54-4	DEF8	Differentially expressed in FDCP 8 homolog	3	CS(1)MRY(1)LALMVS(1)R	51.643	0.030476999999999997	21581000.0	2453.5	2554.3	2420.6	2633.4	2933.8	2413.7	2635.9	3003.8	2779.9	2887.3	True	False	2345.647077737949	2976.3546593235747	1912.5491394562234	2402.533910617263	3319.646123438428	2880.113364442324	3227.0676735636084	2898.154651429954	2650.6630557646254	2364.381991490961	0.9920761899640431	1.2588298633786787	0.808900231155197	1.0161361062906098	1.404022757483906	1.2181252330661454	1.3648673036663779	1.225755678168738	1.1210807159350498	1.0	11.207247422000465	-7.7293475306410615	24.710366698316818	1.240515165142561	1.0211109971471282	0.3089447030565563	0.1474587878230999	198.6938378545647	152991.1076122192	0.04271050315147865	0.055133945033408835	1.864886775989992e-08	7.7293475306410615	-0.21940416799543283	
CS(ph)PTRETLTYAQAQR	ddPTM_K562_Methotrexat_30min_R1	1	CSPTRETLTYAQAQR	15	1	A8WI62;A8WI61;F6XDC4;E9PSF3;E9PI60;Q9ULD4-3;Q9ULD4-2;Q9ULD4	A8WI62	BRPF3	Bromodomain and PHD finger-containing protein 3	1	CS(0.866)PT(0.134)RETLTYAQAQR	101.2	0.026273	0.0	1727.1	1302.4	1815.6	1620.6	1485.4	1371.3	1514.3	1486.7	1419.4	1998.9	True	False	1651.1787519711474	1517.5994629851714	1434.530371642038	1478.5245141438197	1680.756135985901	1636.2843172969951	1853.9203224998569	1434.4119183304176	1353.4124038103214	1636.879840262974	1.0087354681488876	0.9271294237097821	0.8763809879970008	0.9032578187940089	1.0268048360323614	0.9996361840671926	1.1325940224189053	0.876308622690332	0.826824529522514	1.0	10.676732705301687	-6.240155207157842	21.639022193144875	0.9538059972062276	1.0087358186806188	0.037745166494848825	0.08539309617450336	3516.595745654306	3574862.2797843846	0.02278373010646727	0.7556452417754532	5.7523432468566e-07	6.240155207157842	0.05492982147439118	
CS(ph)TPLLHQQYTSR	ddPTM_K562_Methotrexat_30min_R1	1	CSTPLLHQQYTSR	13	0	H0YJG4;Q9HCK8-2;Q9HCK8;A0A2R8Y840	H0YJG4	CHD8	Chromodomain-helicase-DNA-binding protein 8	1	CS(0.5)T(0.5)PLLHQQYTSR	76.24	0.032385000000000004	0.0	2250.6	1922.9	2389.3	2285.9	1689.1	1993.8	1950.7	2096.3	2157.7	2128.4	True	False	2151.66631879235	2240.6265412885346	1887.8185817164162	2085.4986960887063	1911.2462564250613	2379.073632193356	2388.1941313481266	2022.571940805849	2057.3889979579594	1742.9261353823165	1.2345137726220252	1.2855545027426225	1.0831317193498375	1.196550246021324	1.096573295692662	1.3649882137268534	1.370221079864792	1.160446159906938	1.1804223691365237	1.0	10.76729571449535	-10.224537340006721	1.8068534304246613	1.0008482224376398	1.2262627010560676	0.3474693960127707	0.09243711782888107	1.032750224187284	5.814846706538585	0.09445613820368334	0.026617627497056286	5.962970488786893e-11	10.224537340006721	0.22541447861842778	
CSATPSAQVKPIVSAS(ph)PPSR	ddPTM_K562_Methotrexat_30min_R1	1	CSATPSAQVKPIVSASPPSR	20	1	H0Y3K4;Q96EV2	H0Y3K4	RBM33	RNA-binding protein 33	1	CSATPSAQVKPIVS(0.166)AS(0.729)PPS(0.105)R	100.14	0.00020889	77402000.0	3224.1	2528.8	4596.1	3880.8	2552.8	2522.5	1945.7	2624.5	2729.1	4154.5	True	False	3082.372424428338	2946.6412177494653	3631.4414194227656	3540.576289330703	2888.537945297436	3009.937424620194	2382.0727540698485	2532.1948474192372	2602.2247366765873	3402.0797920719024	0.9060259055685289	0.8661293672818091	1.0674180622939415	1.0407093618384695	0.8490506166342108	0.8847345178776982	0.7001813301442708	0.7443078946355647	0.7648923293159462	1.0	11.732201262899267	-8.179832950420256	2.0699496391673913	0.7875983050063747	0.9657357186497634	0.32540874525949315	0.09757824704865765	0.3411494137072776	2.874216292638483	0.03804111402720359	0.03695744043576759	6.609476298969758e-09	8.179832950420256	0.17813741364338864	
CSDVSELS(ph)SSPPGPYHQEPYVCKPEER	ddPTM_K562_Methotrexat_30min_R1	1	CSDVSELSSSPPGPYHQEPYVCKPEER	27	1	Q9Y478;F5H610;F5H2X8	Q9Y478	PRKAB1	5-AMP-activated protein kinase subunit beta-1	1	CSDVS(0.016)ELS(0.37)S(0.305)S(0.305)PPGPY(0.004)HQEPYVCKPEER	110.26	1.0612e-11	64304000.0	2457.4	1437.1	2881.9	2262.9	1438.6	1248.0	1168.0	1903.3	1748.9	2829.1	True	False	2349.375638407677	1674.5563484766524	2277.0285734937156	2064.515070378902	1627.8011156788202	1489.158337334392	1429.9537322061892	1836.3598601992908	1667.5940207297938	2316.7225754604933	1.0140945071684697	0.7228126346305414	0.9828663119239093	0.8911360782887608	0.7026310068029027	0.6427866474424082	0.617231319516951	0.7926541915940362	0.7198073858275099	1.0	11.177869578338079	-7.756070798555446	24.428188746773152	0.7239001830280288	0.8956005943355991	0.27053277261558206	0.12284817144955609	119.57347107250737	544080.1066474249	0.035102185656943195	0.043955516954654245	1.7535946080751553e-08	7.756070798555446	0.1717004113075703	
CSDVSELSS(ph)SPPGPYHQEPYVCKPEER	ddPTM_K562_Methotrexat_30min_R1	2	CSDVSELSSSPPGPYHQEPYVCKPEER	27	1	Q9Y478;F5H610;F5H2X8	Q9Y478	PRKAB1	5-AMP-activated protein kinase subunit beta-1	1	CS(0.001)DVS(0.007)ELS(0.079)S(0.314)S(0.314)PPGPY(0.26)HQEPY(0.024)VCKPEER;CSDVS(0.006)ELS(0.021)S(0.486)S(0.486)PPGPYHQEPYVCKPEER	111.6	6.5161e-12	192789000.0	2404.3999999999996	1887.63	2513.2	2357.3	1617.55	1485.62	1586.46	1679.07	1970.0	2967.0	True	False	2298.705454947269	2199.5287732760303	1985.713664910096	2150.639168944358	1830.2861773017344	1772.695039351538	1942.2640393799932	1620.0161563940642	1878.4151299889622	2429.6475491821698	0.9461065477258311	0.9052871779762466	0.8172846574304558	0.8851650806999858	0.7533134498943342	0.729609955134536	0.7994015593059034	0.666770024705587	0.7731224763942594	1.0	11.246531332680021	-6.873465727944803	0.9090619702921288	0.7711322158341901	0.9657560668926574	0.23842703412791755	0.08637817773397354	1.2037582527134831	1.419126687223133	0.03156798611165752	0.19448545681238236	1.3382408173558546e-07	6.873465727944803	0.19462385105846725	
CSGPGLS(ph)PGMVR	ddPTM_K562_Methotrexat_30min_R1	4	CSGPGLSPGMVR	12	0	A0A087WWY3;Q60FE5;P21333-2;P21333	A0A087WWY3	FLNA	Filamin-A	1	CSGPGLS(1)PGMVR;CS(0.489)GPGLS(0.511)PGMVR;CSGPGLS(1)PGMVR;CSGPGLS(1)PGMVR	153.49	8.9582e-08	399224000.0	9049.4	8025.900000000001	11590.2	10383.3	7964.3	8042.6	7744.800000000001	9016.1	9190.0	10734.8	True	False	8651.599211445604	9352.043558025722	9157.575409454477	9473.012210113246	9011.745047685823	9596.718624876265	9481.768548964468	8698.998652625874	8762.758905887593	8790.623697661196	0.9841849121294339	1.0638657596632073	1.041743535432066	1.0776268596997962	1.0251542276896073	1.0916994009685042	1.078622959538941	0.989576957427981	0.9968301689695787	1.0	13.101749813352873	-9.273851246916427	24.76358490688248	0.994902664322849	1.0534147210887193	0.43677381611699595	0.029295604694911295	638.9787249435302	1274852.4920042476	0.015700034437706904	0.007625645709988051	5.322905464124356e-10	9.273851246916427	0.058512056765870235	
CSLHSASPAS(ph)VR	ddPTM_K562_Methotrexat_30min_R1	1	CSLHSASPASVR	12	0	Q9P206;Q9P206-3;Q9P206-2	Q9P206	KIAA1522	Uncharacterized protein KIAA1522	1	CSLHS(0.005)AS(0.139)PAS(0.856)VR	92.792	0.015006	8505600.0	2988.0	2401.5	4097.5	3290.0	2150.3	2100.2	2213.3	2520.2	2894.5	3419.3	True	False	2856.6510977301796	2798.307056479492	3237.4907456506153	3001.570808054525	2433.102140305968	2506.033926337891	2709.688866003388	2431.56313753704	2759.9353267781985	2800.0316363055604	1.0202210077523712	0.9993840855925672	1.156233630960774	1.0719774623742755	0.8689552320616887	0.8950020042075031	0.9677350894429988	0.868405594425823	0.9856800512510401	1.0	11.45122741229065	-7.749079417694278	24.985964126809524	0.9244238311711976	1.0642190601514208	0.5528243517875631	0.05752102996709091	163.278040133575	330069.0578335179	0.017087933845699326	0.02189862549457989	1.7820528607737788e-08	7.749079417694278	0.13979522898022312	
CSRIMHMQR	ddPTM_K562_Methotrexat_30min_R1	1	CSRIMHMQR	9	1	A0A2R8YFJ4;H0Y4W2;F2Z2U4;Q9Y4A5-2;Q9Y4A5	A0A2R8YFJ4	TRRAP	Transformation/transcription domain-associated protein	0		72.23	0.033341	0.0	0.0	174.44	91.18299999999999	142.74	192.8	142.33	0.0	56.998999999999995	60.451	113.87	False	True	0.0	203.26324502697597	72.04493438942279	130.22620581814687	218.15657938473265	169.83325813525957	0.0	54.99431286265925	57.640646204549604	93.2470395771398	0.0	2.1798359063058923	0.7726243612251379	1.3965720135320283	2.3395550183044667	1.8213260056879643	0.0	0.5897700678975927	0.6181498787086495	1.0	6.542986018054952	-8.755474948542227	24.99975447372416	0.5177941365542409	1.4644694401021234	0.28169564576109785	0.6744396070821392	176.2802450198612	738877.4225870101	0.2590651321574369	0.19529741615349513	1.7560021829505333e-09	8.755474948542227	0.9466753035478825	
CSS(ph)KSTS(ph)LFET(ph)AWEAKAMAVIACLS(ph)DTDK	ddPTM_K562_Methotrexat_30min_R1	1	CSSKSTSLFETAWEAKAMAVIACLSDTDK	29	2	E7ES84	E7ES84	KNTC1		4	CS(0.418)S(0.458)KS(0.278)T(0.363)S(0.713)LFET(0.767)AWEAKAMAVIACLS(0.502)DT(0.502)DK	41.69	0.018652000000000002	7356000.0	0.0	65.96300000000001	130.3	0.0	122.34	173.4	123.46	0.0	141.07	0.0	True	False	0.0	76.86226457070865	102.95181065485664	0.0	138.42985436684745	206.90709590848033	151.14904775528777	0.0	134.5116864911385	0.0											0.0														
CST(ph)PLLHQQYTSR	ddPTM_K562_Methotrexat_30min_R1	1	CSTPLLHQQYTSR	13	0	H0YJG4;Q9HCK8-2;Q9HCK8;A0A2R8Y840	H0YJG4	CHD8	Chromodomain-helicase-DNA-binding protein 8	1	CS(0.009)T(0.991)PLLHQQYTSR	125.33	0.0017250999999999998	10671000.0	1730.4	1630.9	2325.7	1682.6	1356.5	1411.4	1560.4	1598.5	1823.5	2153.1	True	False	1654.333687922457	1900.3785044398942	1837.567352570989	1535.0890704050303	1534.9035266358396	1684.1330747706404	1910.3594210055965	1542.2798489615755	1738.7258830126261	1763.1527260344221	0.9382815586505009	1.0778297741195184	1.0422054342983298	0.8706500847817427	0.8705448506937077	0.9551827529759671	1.083490609064969	0.8747284487546233	0.9861459290161804	1.0	10.78394173240543	-7.228337659801369	24.87750176793124	0.9460905941950597	1.0252780250620708	0.17008493355427956	0.07111939663747137	1023.6084305569127	769288.9548397051	0.019758922261084586	0.0342208840134366	5.9110187941964523e-08	7.228337659801369	0.07918743086701108	
CT(ph)FEGCRKS(ph)Y(ph)S(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	CTFEGCRKSYSR	12	2	P08151-3;P08151-2;P08151	P08151-3	GLI1	Zinc finger protein GLI1	4	CT(1)FEGCRKS(1)Y(1)S(1)R	53.3	0.028377	243430000.0	1999.4	2126.0	2648.0	2549.9	2487.9	2050.0	2305.7	2779.0	2771.9	2944.5	True	False	1911.5087700139616	2477.285364178807	2092.220987061092	2326.3542259751493	2815.102457734837	2446.133486807295	2822.811918106003	2681.260994847807	2643.03497401848	2411.2225172116287	0.7927550262861915	1.0273980715158444	0.8677013308089729	0.9648027958304644	1.1675000700434155	1.0144785349947867	1.1706973943534427	1.1119923506472786	1.0961389731358857	1.0	11.235549079387082	-7.6001035538650825	5.346448897355317	1.0983093008084799	0.9099617086699459	0.5883168390731843	0.07512079817292841	0.1366167444435063	6.840085363084858	0.020937181856446017	0.02731362210374478	2.5112875647250563e-08	7.6001035538650825	-0.18834759213853403	
CT(ph)PLFSRRRR	ddPTM_K562_Methotrexat_30min_R1	1	CTPLFSRRRR	10	3	F5H6W4;Q9H992-2;Q9H992	F5H6W4	MARCH7	E3 ubiquitin-protein ligase MARCH7	1	CT(1)PLFSRRRR	62.633	0.028158999999999997	0.0	1687.5	1428.7	2266.7	2256.4	1841.1	2136.0	1671.9	1802.6	1576.0	1619.9	True	False	1613.3195205554468	1664.7683912522384	1790.9506462882844	2058.584915287003	2083.236920670286	2548.751769668479	2046.86613431124	1739.2015362765926	1502.7321039911685	1326.5204128480611	1.2162040666163767	1.2549888981187658	1.3501116371387636	1.5518682527223135	1.5704522150530213	1.9213814917452097	1.5430340268315847	1.3111004696433568	1.1328375269889575	1.0	10.373431160973572	-9.688716029841654	2.3063142336472175	1.0232243591524268	1.4928257670129532	0.44433995114645586	0.18840284268672877	0.3140147973897791	3.0909940581605384	0.1969140895343228	0.058266618743109545	2.0477831737389189e-10	9.688716029841654	0.4696014078605264	
CTLPEHES(ph)PSQDISDACEAESTER	ddPTM_K562_Methotrexat_30min_R1	1	CTLPEHESPSQDISDACEAESTER	24	0	Q32MZ4-3;Q32MZ4-2;Q32MZ4	Q32MZ4-3	LRRFIP1	Leucine-rich repeat flightless-interacting protein 1	1	CTLPEHES(0.988)PS(0.012)QDISDACEAESTER	99.95700000000001	1.7298e-06	20348000.0	1624.0	1433.5	1951.6	1689.0	1728.3	1140.2	1033.9	1940.7	1769.8	1698.7	True	False	1552.6109045226945	1670.3615096661897	1541.9858301920042	1540.9279923416705	1955.6017435198837	1360.527513003745	1265.7783936027217	1872.4444810007685	1687.5223842916062	1391.0489692604503	1.1161439595819105	1.200792744596357	1.1085057853943123	1.1077453248543099	1.4058468010364704	0.9780586759120838	0.9099452438943767	1.3460665457350875	1.2131293876654647	1.0	10.44195749279938														
CTSNIRCQ	ddPTM_K562_Methotrexat_30min_R1	1	CTSNIRCQ	8	1	C9J075	C9J075	KLKB1		0		18.782	0.034232	17474000.0	76.874	0.0	67.47800000000001	0.0	67.803	171.36	0.0	191.51	146.73	131.5	False	True	73.49471100632854	0.0	53.315289941430656	0.0	76.7202829461775	204.47289478014534	0.0	184.77448475109867	139.90855432653825	107.68407573894689	0.682503058154096	0.0	0.49510839532746	0.0	0.7124570872685637	1.89882202523462	0.0	1.7158942349009727	1.2992501757243249	1.0	6.750661110492057	-8.002009582881318	20.664780715208316	1.1705039463972697	0.296273471865249	0.40269746741622414	0.5106749484203255	8.403982282606252	86436.30997166927	0.15321327431364423	0.17010451727604892	9.953834535754802e-09	8.002009582881318	-0.8742304745320207	
CVDMQRSRHEERS(ph)	ddPTM_K562_Methotrexat_30min_R1	1	CVDMQRSRHEERS	13	3	F5H235	F5H235	DDX11		1	CVDMQRSRHEERS(1)	94.54700000000001	0.0039777	52370000.0	371.76	461.9	371.9	501.14	384.17	443.94	464.14	467.8	372.47	311.34	True	False	355.4178755328551	538.2211240424222	293.84327231420684	457.2058342700442	434.695088704527	529.7251220162098	568.235209988168	451.3472088484357	355.15395099847143	254.9533090537165	1.394050843474134	2.1110576130197374	1.1525375897447032	1.793292410939898	1.7049988106368936	2.0777338563768204	2.2287814662897576	1.7703132017531125	1.3930156557553974	1.0	7.994089252684935														
CVGAELEYDS(ph)EHSDWHGFD	ddPTM_K562_Methotrexat_30min_R1	2	CVGAELEYDSEHSDWHGFD	19	0	H7BYU9;Q9GZN8;Q9GZN8-2	H7BYU9	C20orf27	UPF0687 protein C20orf27	1	CVGAELEYDS(0.874)EHS(0.126)DWHGFD;CVGAELEYDS(0.999)EHS(0.001)DWHGFD	97.77600000000001	0.00059309	12073700.0	2471.2	2030.7399999999998	2229.3	2866.9	2079.45	2015.21	2333.8999999999996	2331.8999999999996	2842.6	2669.8	True	False	2362.569006931331	2366.2852683219517	1761.4003951870452	2615.5633281493983	2352.934123452189	2404.6208116824023	2857.3364859554995	2249.8857552664977	2710.448146450063	2186.273349109052	1.0806375185857353	1.0823373341152687	0.8056633887545898	1.1963569556456837	1.0762305291838525	1.0998719865758464	1.3069438398999458	1.0290962729721647	1.2397572094791451	1.0	11.094258076682753	-7.332960244894883	24.999948185995233	1.1398714154571994	0.9988128195259182	0.2549116991043978	0.11381777469979254	201.78017785157385	70530.84371008209	0.030889556407982643	0.04581662291675009	4.645577986708098e-08	7.332960244894883	-0.14105859593128123	
CVWS(ph)PLASPSTSILK	ddPTM_K562_Methotrexat_30min_R1	2	CVWSPLASPSTSILK	15	0	Q5UIP0-2;Q5UIP0;H7C2B5	Q5UIP0-2	RIF1	Telomere-associated protein RIF1	1	CVWS(0.999)PLAS(0.001)PSTSILK;CVWS(0.995)PLAS(0.005)PSTSILK	106.6	0.0016075	14591200.0	5203.9	3455.0	6376.2	4760.2	4021.0	3511.5	3351.9	4822.6	5523.4	6479.7	True	False	4975.142786973921	4025.880025041284	5037.9227559286	4342.88065668728	4549.831979802956	4190.047677523809	4103.64889981329	4652.986424524302	5266.618339584278	5306.163540423228	0.9376158026552448	0.7587176675523599	0.9494473205638828	0.8184596316345132	0.8574616943374599	0.7896567163079946	0.7733739958354122	0.8769021891385526	0.992547308325933	1.0	12.373453425988519	-9.704248613021694	3.772827694594939	1.001031611814364	0.8387666613453689	0.5099125081582061	0.060036098900121515	0.1696901307518529	4.624922680198901	0.04831524154188952	0.014949332432516753	1.9758382424934456e-10	9.704248613021694	-0.16226495046899514	
CVWS(ph)PLASPSTSILKR	ddPTM_K562_Methotrexat_30min_R1	2	CVWSPLASPSTSILKR	16	1	Q5UIP0-2;Q5UIP0;H7C2B5	Q5UIP0-2	RIF1	Telomere-associated protein RIF1	1	CVWS(1)PLASPSTSILKR;CVWS(1)PLASPSTSILKR	110.34	0.00074948	16914000.0	2363.3900000000003	1411.5900000000001	2538.8999999999996	2410.38	1437.01	1318.9	1525.33	2411.9	2245.25	3409.6000000000004	True	False	2259.498205443281	1644.8312545725116	2006.0195861213774	2199.065727756374	1626.0020028094118	1573.7587589025065	1867.4240807757424	2327.0721099220673	2140.868817567369	2792.088400300483	0.8092502390684031	0.5891042899628449	0.7184656423863552	0.787606054134859	0.5823605021368314	0.5636493309929369	0.6688269900676395	0.833452160637761	0.7667625485414323	1.0	11.447128904095097	-10.023580546964833	1.0819349021227145	0.99270817506259	0.6722099943285278	0.5502737298010765	0.08684719760478783	0.4232646717435307	1.1111290069943773	0.08486446230356795	0.02755339362165135	9.471515035847489e-11	10.023580546964833	-0.3204981807340622	
DAEPRPPHGELQYLGQIQHILR	ddPTM_K562_Methotrexat_30min_R1	1	DAEPRPPHGELQYLGQIQHILR	22	1	P04818-3;P04818-2;P04818	P04818-3	TYMS	Thymidylate synthase	0		83.792	0.00049365	3633000.0	1481.7	1129.8	1728.1	1939.2	1085.3	995.01	1406.7	1865.8	1650.2	2176.1	False	True	1416.566242137486	1316.4802466835433	1365.395425883788	1769.1933468022298	1228.0359730614648	1187.2816003454266	1722.1882834712717	1800.1787564544923	1573.4825621866928	1781.987203159866	0.7949362597136466	0.738770875766743	0.7662206683990959	0.9928204555369703	0.6891384915020038	0.6662683089082277	0.966442565029335	1.010208576841836	0.8829931883890931	1.0	10.799271261250267	-8.785573008555621	24.8015941270097	0.9657619474518714	0.7787007248331815	0.524862927663571	0.08861282638870835	186.00052948348073	191146.48777785606	0.03861774418003549	0.026051299915931907	1.6384266048375622e-09	8.785573008555621	-0.18706122261868985	
DAGLLVEQPPLAGVAAS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	DAGLLVEQPPLAGVAASPR	19	0	Q13469-3;Q13469-4;Q13469-2;Q13469	Q13469-3	NFATC2	Nuclear factor of activated T-cells, cytoplasmic 2	1	DAGLLVEQPPLAGVAAS(1)PR;DAGLLVEQPPLAGVAAS(1)PR;DAGLLVEQPPLAGVAAS(1)PR;DAGLLVEQPPLAGVAAS(1)PR	250.42	2.593599999999999e-84	180505200.0	9224.6	7108.79	7396.110000000001	10114.900000000001	6770.73	6893.84	6859.37	7546.91	8776.1	9522.3	True	False	8819.097629224161	8283.39671873032	5843.767584823418	9228.142421395358	7661.199671875467	8225.977013020294	8397.758332262983	7281.480897670687	8368.10102654626	7797.719197026421	1.1309842540351072	1.0622845616047711	0.7494201108257242	1.1834412330357336	0.9824923773604192	1.0549209076619719	1.0769505954337752	0.9337962439641843	1.073147264617755	1.0	12.928836487570038	-6.524145843419432	24.99695336839129	1.0068604237791312	1.1138094197936992	0.11497874424411558	0.10739967452350645	74.06051711452997	1461085.7959151827	0.026401567861490213	0.07104770281694252	2.9912599523277443e-07	6.524145843419432	0.10694899601456798	
DAGTIAGLNVLR	ddPTM_K562_Methotrexat_30min_R1	2	DAGTIAGLNVLR	12	0	E9PKE3;P11142-2;P11142;E9PN89;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PI65	E9PKE3	HSPA8	Heat shock cognate 71 kDa protein	0	;	114.89	0.01192	19814700.0	1962.17	1486.75	1997.7199999999998	2296.0	1812.1399999999999	1320.07	1335.35	2096.48	1992.0300000000002	2112.3	False	True	1875.915356236018	1732.410167070949	1578.4258724590948	2094.7132447699673	2050.4681730614584	1575.154844843758	1634.8362297102174	2022.7456101038251	1899.420960097418	1729.7420013945055	1.0845058712360969	1.0015425223381824	0.9125209835840139	1.210997503142795	1.1854185025329707	0.9106299341600537	0.9451329900021068	1.1693915095274916	1.0980949520599712	1.0	10.756341154277875	-7.2328529398587	24.990616105315084	1.0737320996443616	0.9997251013746941	0.10090915263945355	0.10219199851704457	1953.1641697206767	1707477.8691580633	0.02982537225205995	0.05165068626179672	5.8498813840975864e-08	7.2328529398587	-0.0740069982696675	
DALDLSDINSEPPRGS(ph)FPSFEPR	ddPTM_K562_Methotrexat_30min_R1	2	DALDLSDINSEPPRGSFPSFEPR	23	1	Q99640-4;Q99640-3;Q99640	Q99640-4	PKMYT1	Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase	1	DALDLSDINS(0.011)EPPRGS(0.922)FPS(0.067)FEPR;DALDLSDINS(0.004)EPPRGS(0.967)FPS(0.03)FEPR	71.89399999999999	0.0018024	57666000.0	2685.3	1786.35	2600.2	2854.0	1946.38	1660.24	2123.64	2701.6000000000004	2399.4	3395.7	True	False	2567.2574272874317	2081.513974741679	2054.453553835443	2603.794251120856	2202.3630860106646	1981.0578829936296	2599.920328649274	2606.583196718544	2287.852417713459	2780.7058249942365	0.9232394898488597	0.748555980295396	0.7388244867073277	0.9363788962200822	0.7920158494346411	0.7124298676929394	0.9349857526387793	0.9373818594147573	0.8227596019504152	1.0	11.441235412564815	-10.049976319608648	0.5101096673222384	0.9993651912590751	0.8087366860494948	0.2719234856077716	0.08344968965146192	1.4374769306984005	0.9058042003335696	0.10138842760776219	0.04712659133136733	8.912995359108052e-11	10.049976319608648	-0.1906285052095803	
DALGDSLQVPVSPSSTT(ph)SS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	DALGDSLQVPVSPSSTTSSR	20	0	C9JVY5;Q9Y2D5;Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4	C9JVY5	AKAP2	A-kinase anchor protein 2	2	DALGDSLQVPVSPS(0.003)S(0.263)T(0.315)T(0.379)S(0.076)S(0.964)R	73.461	0.01223	53114000.0	3531.9	3313.9	3336.1	3487.8	3656.6	3441.7	3732.3	3755.2	3980.8	3951.4	True	False	3376.6419049776505	3861.465648331204	2635.8982005039684	3182.0299891588397	4137.506992625588	4106.759815387639	4569.36328314483	3623.127487532377	3795.733476883277	3235.7631701511377	1.0435380240822547	1.1933709129122825	0.8146140684272791	0.9833939697787623	1.2786804148068511	1.269178119483886	1.4121439187193054	1.119713432971408	1.1730566414432562	1.0	11.659890303507868	-7.757303585909273	24.999032983239033	1.2279676614148054	1.0080525303170453	0.34457914674608703	0.13361252640165694	114.67248217287177	693138.6350290028	0.04077493946339191	0.05073592864884181	1.748623916541723e-08	7.757303585909273	-0.21991513109776006	
DAPTS(ph)PASVASSSSTPSSK	ddPTM_K562_Methotrexat_30min_R1	2	DAPTSPASVASSSSTPSSK	19	0	H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726;A0A0D9SES8	H0YKH0	TLE3	Transducin-like enhancer protein 3	1	DAPT(0.004)S(0.994)PAS(0.002)VASSSSTPSSK;DAPT(0.095)S(0.843)PAS(0.062)VASSSSTPSSK	226.08	5.8167e-45	164041000.0	5624.6	4357.0	8698.8	6016.7	3483.3	3900.4	3714.7999999999997	5123.700000000001	4797.5	5722.2	True	False	5377.34931870588	5076.920193662772	6873.0407561355805	5489.225252529381	3941.4150050354724	4654.097098508864	4547.938462670848	4943.496566859197	4574.465272143169	4685.8541307483065	1.147570788305172	1.083456729979773	1.4667637029149245	1.1714460372356448	0.8411305377971825	0.9932227868488149	0.9705676565618072	1.0549830252760655	0.9762286969467936	1.0	12.194096328892682	-7.598195992921166	7.170523481982494	0.977441012933689	1.2341227786969622	0.5709248034429779	0.10480397935300724	0.16524110227368147	13.104709743183742	0.031693957484945	0.04101731734179404	2.5223422068185357e-08	7.598195992921166	0.2566817657632732	
DAPVHGS(ph)PTGPGAWTASK	ddPTM_K562_Methotrexat_30min_R1	1	DAPVHGSPTGPGAWTASK	18	0	Q9BRP1	Q9BRP1	PDCD2L	Programmed cell death protein 2-like	1	DAPVHGS(0.972)PT(0.028)GPGAWTASK	81.373	0.0058492	12200000.0	2574.4	1632.2	2516.2	2189.3	1668.4	1265.6	1413.1	2252.6	2492.3	3191.0	True	False	2461.2324584995226	1901.8933073436724	1988.0840059075235	1997.367468107531	1887.823843596929	1510.159288245518	1730.023646387471	2173.3747812141655	2376.4335169906044	2613.078978577791	0.9418898084125596	0.7278361361962383	0.7608204812047316	0.7643731722164132	0.7224518887769732	0.5779233236446016	0.6620632826525065	0.8317294651373525	0.9094380753405377	1.0	11.351535014479067	-9.734652411944573	2.252551270159198	0.9863627006949964	0.7326822838888124	0.49693607944251006	0.08814850446793504	0.2541736611832094	2.418934976533867	0.08622721599549235	0.025030400086134063	1.8422458550405004e-10	9.734652411944573	-0.25368041680618403	
DAS(ph)VPLIDVTNLPTPR	ddPTM_K562_Methotrexat_30min_R1	2	DASVPLIDVTNLPTPR	16	0	Q96A65-2;Q96A65	Q96A65-2	EXOC4	Exocyst complex component 4	1	DAS(1)VPLIDVTNLPTPR;DAS(1)VPLIDVTNLPTPR	150.91	3.6956e-10	13143800.0	2431.16	1795.73	2339.43	2261.19	1697.39	1561.98	1884.94	1947.33	2540.82	1936.47	True	False	2324.2891173887892	2092.44386030894	1848.4156132025414	2062.954983423955	1920.6265367315953	1863.8105286454902	2307.68577738419	1878.8413001428491	2422.6978327809925	1585.7565182220428	1.4657288749440502	1.3195240481527375	1.1656364592938853	1.3009279543980368	1.2111736667398412	1.1753447059673465	1.4552585790229493	1.1848233184306343	1.5277867723963903	1.0	10.630955557015616	-6.33538994053089	3.5820416074887467	1.2630076204711689	1.4751993121702207	0.16597643973314946	0.14289726856712542	0.43073196205040293	9.297175707357733	0.033671812897941605	0.21170575928538934	4.61966049095674e-07	6.33538994053089	0.21219169169905183	
DASVPLIDVTNLPT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	DASVPLIDVTNLPTPR	16	0	Q96A65-2;Q96A65	Q96A65-2	EXOC4	Exocyst complex component 4	1	DASVPLIDVTNLPT(1)PR;DASVPLIDVTNLPT(1)PR;DASVPLIDVTNLPT(1)PR;DASVPLIDVTNLPT(1)PR	203.06	2.1671e-15	43575100.0	6490.78	5728.429999999999	6179.9	6746.0	6043.3	5150.32	5648.719999999999	6810.699999999999	7426.0	8496.300000000001	True	False	6205.453083040521	6674.955690838567	4882.823443330376	6154.588653840678	6838.099876533997	6145.546448669919	6915.589251873066	6571.163820658491	7080.766880861941	6957.537739169694	0.8919036181586094	0.95938476240808	0.7018033715923598	0.8845929241880276	0.9828333144406415	0.8832932970052885	0.993970785517919	0.9444668598294499	1.017711602338639	1.0	12.76436111372602	-8.246767963302979	1.0054799517820967	0.9870922735576187	0.8595330230346704	0.3556983453846754	0.0709627790209391	0.6443666224174366	1.3780387577472415	0.04153291910641094	0.038302950872861063	5.6654190259985184e-09	8.246767963302979	-0.12755925052294836	
DAVTYTEHAK	ddPTM_K562_Methotrexat_30min_R1	3	DAVTYTEHAK	10	0	P62805	P62805	HIST1H4A	Histone H4	0	;;	130.94	0.0017745	103751000.0	15321.8	10350.4	22009.0	16160.099999999999	11726.2	11106.800000000001	9790.900000000001	13726.0	13402.2	16435.5	False	True	14648.272017805297	12060.627673281424	17389.611670780814	14743.369123173845	13268.400836002349	13253.031907937195	11986.758558782176	13243.248800029145	12779.134647278202	13458.871686748767	1.0883729601365901	0.8961098637381307	1.2920556845714002	1.0954387162847952	0.9858479332309892	0.9847060152141701	0.8906213565126716	0.9839791260561672	0.9494952433390226	1.0	13.716269847435024	-7.833548627246694	4.18749601865705	0.9593961279095965	1.0933986063436272	0.3125619877541469	0.09286013523232912	0.2775967091322703	9.41681839188971	0.029962949979933057	0.03503784044843687	1.4670718120667439e-08	7.833548627246694	0.13400247843403068	
DCLIEDS(ph)DDEAGQS	ddPTM_K562_Methotrexat_30min_R1	1	DCLIEDSDDEAGQS	14	0	H3BSW6;Q2VPK5-3;Q2VPK5;H3BPG4	H3BSW6	CTU2	Cytoplasmic tRNA 2-thiolation protein 2	1	DCLIEDS(0.979)DDEAGQS(0.021)	87.21600000000001	0.020858	25838000.0	4361.9	3543.1	4355.8	4005.0	3314.1	3392.7	3142.2	3398.0	3877.0	4577.6	True	False	4170.15609879159	4128.5370525973285	3441.5771055289665	3653.887868163641	3749.9622393098693	4048.2912588737104	3846.9183367622336	3278.490413995264	3696.7591162270087	3748.552282149075	1.1124711048183131	1.101368406213186	0.9181083379623781	0.9747464069165491	1.000376133785704	1.079961263486178	1.0262410784775728	0.8746017574858739	0.9861831549826023	1.0	11.872117808635576	-6.70464338767716	10.321967798029538	0.9834821557567985	1.1075131090481884	0.4695165889697851	0.05288341501815594	0.42874362316234105	74.76731068739541	0.014533686391685794	0.03846111131476265	1.9740430171670604e-07	6.70464338767716	0.12403095329138991	
DDEAAAVALSSLIHALDDLDMVAIVR	ddPTM_K562_Methotrexat_30min_R1	1	DDEAAAVALSSLIHALDDLDMVAIVR	26	0	P13010	P13010	XRCC5	X-ray repair cross-complementing protein 5	0		133.51	6.423e-13	6012100.0	792.2	586.06	772.83	653.89	694.51	665.52	693.1	1152.9	785.67	1274.8	False	True	757.3758365534964	682.8964536832692	610.6235443468365	596.5644789297188	785.8502383220466	794.1223210438981	848.5453183151626	1112.3518535300595	749.1443731870191	1043.921366935434	0.7255104268790579	0.6541646481362863	0.584932508987148	0.5714649568683615	0.7527868125058226	0.7607108602203887	0.8128440945759899	1.0655513803645116	0.7176252895237016	1.0	10.027797330090246	-8.54029833428248	1.292298179069261	0.92056756349221	0.6375958906484607	0.5891792008121941	0.09804260046186802	0.30315515440543866	1.0320630471541739	0.05323379086344237	0.037634574388505974	2.882051026631653e-09	8.54029833428248	-0.28297167284374936	
DDLQRLQEVLQS(ph)ESDQLK	ddPTM_K562_Methotrexat_30min_R1	1	DDLQRLQEVLQSESDQLK	18	1	A0A087X0P0;Q02224-3;Q02224	A0A087X0P0	CENPE	Kinesin-like protein;Centromere-associated protein E	1	DDLQRLQEVLQS(0.538)ES(0.462)DQLK	83.723	0.005024100000000001	30610000.0	205.59	117.0	209.16	0.0	0.0	0.0	105.27	0.0	103.42	144.94	True	False	196.55250976651516	136.33226134003777	165.26017434052034	0.0	0.0	0.0	128.8794772169054	0.0	98.61202677332912	118.68996150268414	1.6560162904937008	1.1486418869295416	1.392368589965235	0.0	0.0	0.0	1.085849852718933	0.0	0.8308371283033825	1.0	6.891054110409772	-7.248606318660397	24.560252110014996	0.36816295695492085	1.3739723756754587	0.5271612890371274	0.4244051076911844	467.52148912214716	894753.0848652028	0.11335327956798862	0.19465071001792528	5.641488164292792e-08	7.248606318660397	1.005809418720538	
DDPRAS(ph)S(ph)PNRTIQQENPR	ddPTM_K562_Methotrexat_30min_R1	1	DDPRASSPNRTIQQENPR	18	2	Q9H2D6-4;Q9H2D6-3;Q9H2D6-2;Q9H2D6	Q9H2D6-4	TRIOBP	TRIO and F-actin-binding protein	2	DDPRAS(1)S(1)PNRTIQQENPR	61.495	0.033779	0.0	0.0	0.0	104.61	0.0	0.0	117.8	109.65	0.0	119.92	186.9	True	False	0.0	0.0	82.65379058023444	0.0	0.0	140.56318280287766	134.24180371267863	0.0	114.34494537475955	153.05059890197094	0.0	0.0	0.5400422551314176	0.0	0.0	0.9184098841253703	0.877107340159189	0.0	0.747105507558305	1.0	7.257864880057551	-8.252005747219156	24.931247928206655	0.6565609739516942	0.12000937495097305	0.49411523406270785	0.301407245863305	652.7112323812511	1724989.6544168945	0.10285569461262917	0.10155042056814104	5.597501940136477e-09	8.252005747219156	-0.5365515990007211	
DDQMLKR	ddPTM_K562_Methotrexat_30min_R1	1	DDQMLKR	7	1	P52292;J3QLL0;J3KS65	P52292	KPNA2	Importin subunit alpha-1	0		52.636	0.030354000000000003	0.0	3410.4	2991.0	4590.5	4053.0	2687.8	2732.5	2380.4	3156.0	3444.0	4218.6	False	True	3260.4828994976583	3485.2119116927593	3627.016782894239	3697.679782688451	3041.2928115678637	3260.5169525370393	2914.265294643504	3045.0016911621706	3283.889191716742	3454.5706609302024	0.9438171105811792	1.0088697710280172	1.0499182500199902	1.0703731796566545	0.8803678112489218	0.9438269679680221	0.8435969562303839	0.8814414264556545	0.9505925667858531	1.0	11.75429070617705	-7.768548990097717	24.999265435227716	0.9084171185206358	1.0198373569039163	0.4790354050234785	0.05147258372616228	132.55766063355964	466106.6676715694	0.015934361989117834	0.0184437581876426	1.7039270989053874e-08	7.768548990097717	0.11142023838328052	
DEALQNIS(ph)ADDLPDSASQAAHPQDSAFSYR	ddPTM_K562_Methotrexat_30min_R1	3	DEALQNISADDLPDSASQAAHPQDSAFSYR	30	0	Q14C86-4;Q14C86-2;Q14C86-6;F8W9S7;Q14C86-3;Q14C86-5;Q14C86	Q14C86-4	GAPVD1	GTPase-activating protein and VPS9 domain-containing protein 1	1	DEALQNIS(0.999)ADDLPDS(0.001)ASQAAHPQDSAFSYR;DEALQNIS(1)ADDLPDSASQAAHPQDSAFSYR;DEALQNIS(0.98)ADDLPDS(0.019)AS(0.001)QAAHPQDSAFSYR	126.98	3.6196e-16	82903000.0	1045.47	979.69	1164.5	1252.05	1183.1299999999999	990.71	941.75	1261.49	1299.84	1204.31	True	False	999.512390610432	1141.567120617279	920.0873638340793	1142.28472043303	1338.7323328187688	1182.1506862023678	1152.9614103640222	1217.1226816806616	1239.4107221141373	986.1977889974987	1.0135009444976226	1.1575437841710414	0.93296433443577	1.1582714270675851	1.3574683980782725	1.1986953321037774	1.169097541311712	1.2341567738839745	1.2567567438718734	1.0	9.945733208172548	-7.51149971695056	24.7119002994791	1.2166460840232551	1.0467338737035212	0.36036341975312003	0.09878856435157378	470.3245816363536	1021407.4671251796	0.02694775386955969	0.03744547224062431	3.079642348644538e-08	7.51149971695056	-0.16991221031973391	
DEDMLYS(ph)PELAQR	ddPTM_K562_Methotrexat_30min_R1	1	DEDMLYSPELAQR	13	0	Q9Y2W2	Q9Y2W2	WBP11	WW domain-binding protein 11	1	DEDMLY(0.001)S(0.999)PELAQR	101.32	0.0041723	15853000.0	2925.6	2255.0	3372.8	2867.9	2603.0	2424.7	2099.2	2651.4	2663.8	3377.2	True	False	2796.994127014527	2627.6004215537196	2664.8953720391432	2616.475659701998	2945.340125199477	2893.238958761777	2569.999036513042	2558.148759172173	2539.9605194236537	2765.5563542629	1.0113676124166364	0.9501163906869835	0.9636019052482531	0.9460937780815404	1.065008174814248	1.0461688673608345	0.9292882542608756	0.9250033018596696	0.9184265999528424	1.0	11.433354025084126	-8.797293956337267	24.999948272851746	0.9369297556258293	0.9941768791322502	0.27612570429770567	0.04210078921084714	247.10002555083204	172290.6639268452	0.01892518964108686	0.012759862603029984	1.594799326791279e-09	8.797293956337267	0.057247123506420916	
DEILPT(ph)TPISEQK	ddPTM_K562_Methotrexat_30min_R1	1	DEILPTTPISEQK	13	0	E9PPU1;H0YEU2;E9PL09;P23396;P23396-2;E9PSF4	E9PPU1	RPS3	40S ribosomal protein S3	1	DEILPT(0.984)T(0.016)PISEQK	201.3	6.6258e-11	23414000.0	5014.0	3071.2	6832.7	4465.8	3684.9	3202.9	2514.2	5147.4	4461.0	6169.6	True	False	4793.590563594081	3578.6635985258463	5398.60964437021	4074.2902476017935	4169.528938665984	3821.815095070769	3078.0733506102733	4966.363024425903	4253.609083695817	5052.2256553536645	0.948807692014802	0.7083340774246026	1.0685606725917902	0.8064347330338288	0.8252855717653234	0.756461677641205	0.6092509639486408	0.9830049889325952	0.8419277708208497	1.0	12.302703362542355	-10.073426240462313	1.5023279426484786	0.9937668017334423	0.8266709979568996	0.12541589895452443	0.1278321095082206	1.020025388207313	5.049871412318099	0.12117335290165306	0.03564764236767193	8.444496490425061e-11	10.073426240462313	-0.16709580377654276	
DEILPTT(ph)PISEQK	ddPTM_K562_Methotrexat_30min_R1	3	DEILPTTPISEQK	13	0	E9PPU1;H0YEU2;E9PL09;P23396;P23396-2;E9PSF4	E9PPU1	RPS3	40S ribosomal protein S3	1	DEILPT(0.052)T(0.915)PIS(0.033)EQK;DEILPT(0.235)T(0.762)PIS(0.003)EQK;DEILPT(0.307)T(0.678)PIS(0.015)EQK	129.76	0.0010316	550091000.0	24233.5	16741.5	36959.6	21323.2	18912.0	15042.3	13733.3	23869.3	23246.3	30289.7	True	False	23168.2243563736	19507.748318155915	29202.28504281839	19453.82816240374	21399.25948819534	17949.011584683576	16813.34211516032	23029.803189751958	22165.58458693522	24803.94181680592	0.9340541325038895	0.7864777486672877	1.1773243647520721	0.7843038943601615	0.8627362395156186	0.7236354494478864	0.6778496030727034	0.9284735208557902	0.8936315344812218	1.0	14.598281789986629	-5.899394183973466	16.10169839140193	0.8640630507774331	3.8518546882694022	0.01702886518915614	0.13726348057751397	27602559.143480543	34156273.95895989	0.03486037768569587	2962921291.7524858	1.2606827663438912e-06	5.899394183973466	2.987791637491969	
DERSDS(ph)RAQAVSEDAGGNEGR	ddPTM_K562_Methotrexat_30min_R1	1	DERSDSRAQAVSEDAGGNEGR	21	2	P55884-2;P55884;C9JZG1	P55884-2	EIF3B	Eukaryotic translation initiation factor 3 subunit B	1	DERS(0.262)DS(0.738)RAQAVSEDAGGNEGR	87.35600000000001	0.00073182	10785000.0	842.74	506.41	775.1	1280.6	778.19	528.99	695.47	597.46	910.78	1130.3	True	False	805.6941586683839	590.0856450017822	612.4171023682222	1168.3317862597655	880.535625059155	631.2098308225317	851.4468511450668	576.4469931564486	868.438036594592	925.5917171690618	0.8704638813456687	0.6375226074910969	0.6616492898632569	1.2622539339841203	0.9513218503643144	0.6819527650410462	0.9198946310250395	0.6227875449442456	0.9382517372246206	1.0	9.854232144050956														
DETEFYLGKR	ddPTM_K562_Methotrexat_30min_R1	1	DETEFYLGKR	10	1	F8WBS5;F8WB72;C9K025;P18077	F8WBS5	RPL35A	60S ribosomal protein L35a	0		114.86	0.0037498000000000006	26841000.0	2686.7	1812.4	3902.0	2692.5	1675.6	1772.0	1914.7	2603.6	2442.8	3496.8	False	True	2568.5958849637445	2111.868294467387	3083.023523985039	2456.45270537593	1895.970769798018	2114.4139212792797	2344.120214944512	2512.0299122654715	2329.234761186312	2863.4956353152065	0.8970140737375351	0.7375140609337502	1.0766643000821852	0.8578510388075131	0.6621175693146514	0.7384030536671414	0.8186218920799847	0.8772599061387965	0.813423541653108	1.0	11.483561689098062	-7.527005950221513	24.999465687141857	0.8038059726561407	0.9004672334128558	0.09609450299680855	0.1123226594684745	245.26070744104462	1485591.8693491707	0.03318115070365563	0.04301767386299513	2.9716253175434907e-08	7.527005950221513	0.0966612607567151	
DFGEEHPFYDR	ddPTM_K562_Methotrexat_30min_R1	1	DFGEEHPFYDR	11	0	Q68CQ4	Q68CQ4	DIEXF	Digestive organ expansion factor homolog	0		112.94	0.0031491999999999996	9707700.0	6614.0	5758.8	7691.4	7046.1	5861.8	5660.1	5237.0	6358.8	5953.2	6718.1	False	True	6323.25647937999	6710.343817136833	6077.080249200028	6428.379352775989	6632.729445214868	6753.834218867299	6411.530561270387	6135.157399797846	5676.437031396087	5501.386990279995	1.1493931422297863	1.2197549143503006	1.1046451122120993	1.1685015731730617	1.2056467681575138	1.2276602665473566	1.1654389288734748	1.1152019319196438	1.0318192560213224	1.0	12.425579676342016	-9.652823128309414	1.9299944701547438	1.0010383686260629	1.1792015790020056	0.7852182729239364	0.033757196239553845	0.15370781893958607	1.0522334637206645	0.032265039139811755	0.009801733594764753	2.224215544953523e-10	9.652823128309414	0.17816321037594274	
DFPTIS(ph)RS(ph)PS(ph)GPPAMDLEGPR	ddPTM_K562_Methotrexat_30min_R1	1	DFPTISRSPSGPPAMDLEGPR	21	1	O96018	O96018	APBA3	Amyloid beta A4 precursor protein-binding family A member 3	3	DFPT(0.395)IS(0.607)RS(0.998)PS(0.999)GPPAMDLEGPR	72.935	0.0026923000000000003	8099900.0	204.3	0.0	208.04	161.06	186.61	172.05	175.96	165.33	197.5	236.26	True	False	195.31921662191286	0.0	164.3752470348148	146.94011986178182	211.15248588685148	205.29622751472917	215.42350917722683	159.5152501900639	188.31826810803048	193.47102459379158	1.0095528104634879	0.0	0.8496117048014514	0.7594941938737068	1.09139074613464	1.0611213123296659	1.1134665236281573	0.8244916804724602	0.9733667793584091	1.0	7.595973705472572	-7.230178626120868	2.137931756555478	0.999308699517434	0.5131844871502139	0.3237191154044755	0.2552565473713897	0.3227638299342065	2.875384701639813	0.07231645570685487	0.1441580163741608	5.886015126751053e-08	7.230178626120868	-0.48612421236722003	
DFQDYMEPEEGCQGS(ph)PQR	ddPTM_K562_Methotrexat_30min_R1	1	DFQDYMEPEEGCQGSPQR	18	0	O43237;O43237-2;H3BUM4;B4E2E0	O43237	DYNC1LI2	Cytoplasmic dynein 1 light intermediate chain 2	1	DFQDYMEPEEGCQGS(1)PQR	77.795	0.015368999999999999	0.0	1211.7	801.74	1291.6	1013.3	884.32	844.51	736.9	1397.8	1417.2	1182.5	True	False	1158.4351188486132	934.2139077501015	1020.5108107583484	924.4655622497421	1000.6235802982713	1007.6996053383547	902.1685832728945	1348.6385817194184	1351.3146813301305	968.3377913407205	1.1963130316794637	0.9647603512991345	1.0538789458432591	0.9546932594355997	1.033341452999422	1.0406488462493397	0.9316672253633612	1.392735669081085	1.395499270413846	1.0	9.919366589426513	-9.260579594395557	24.998454594437497	1.2955881073748867	1.0220473900730318	0.42725838385228987	0.12435213631280448	60.787627216148074	1767480.0487502476	0.05877043294757804	0.03136358855444199	5.488079647794739e-10	9.260579594395557	-0.2735407173018549	
DFQDYMEPEEGCQGS(ph)PQRR	ddPTM_K562_Methotrexat_30min_R1	2	DFQDYMEPEEGCQGSPQRR	19	1	O43237;O43237-2;H3BUM4;B4E2E0	O43237	DYNC1LI2	Cytoplasmic dynein 1 light intermediate chain 2	1	DFQDYMEPEEGCQGS(1)PQRR;DFQDY(0.014)MEPEEGCQGS(0.986)PQRR	65.265	0.010054	64561000.0	4316.2	3504.5	5465.200000000001	4190.3	3597.0	3138.3999999999996	3094.7	4700.299999999999	4872.9	5186.6	True	False	4126.465016071952	4083.5590586851463	4318.129206376994	3822.9429048604534	4070.068547961012	3744.8513829248823	3788.7652526185725	4534.987784844599	4646.359942600615	4247.25648081842	0.9715601199758033	0.9614580793807559	1.0166867072611818	0.9000970207769973	0.9582817911615112	0.8817106760181511	0.8920500256411408	1.067745215134909	1.09396735600608	1.0	12.05231551659492	-9.274189929097982	24.801386049431557	1.060642232404484	0.9409141362263674	0.5767280883146912	0.044499028510325556	512.3761111205329	996628.4296366837	0.02514874496000217	0.01220817352899923	5.318756043509658e-10	9.274189929097982	-0.11972809617811653	
DFQEYVEPGEDFPAS(ph)PQR	ddPTM_K562_Methotrexat_30min_R1	4	DFQEYVEPGEDFPASPQR	18	0	Q9Y6G9;E9PHI6;C9JGM7	Q9Y6G9	DYNC1LI1	Cytoplasmic dynein 1 light intermediate chain 1	1	DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR	123.55	3.9908e-06	36029000.0	8045.71	6992.16	11184.779999999999	8540.17	8031.55	7901.75	7130.34	8751.88	8487.91	8546.81	True	False	7692.030222061135	8147.4955936013475	8837.247527062367	7791.466555569315	9087.83960143905	9428.651355794898	8729.500252482088	8444.071419787188	8093.308916743453	6998.899888717783	1.0990341831379353	1.1641108921610808	1.2626623708831723	1.1132416064600592	1.2984668656410752	1.347161911973319	1.247267483644684	1.206485526875305	1.1563687215743514	1.0	12.772912456745456	-10.159136623194957	2.051472796313247	1.0003331842594683	1.2221788109076706	0.4428910778804718	0.07364839444883603	0.5988266646587691	4.834288297208163	0.07557361586450514	0.0209476909417783	6.932076979057455e-11	10.159136623194957	0.2218456266482023	
DFQEYVEPGEDFPAS(ph)PQRR	ddPTM_K562_Methotrexat_30min_R1	3	DFQEYVEPGEDFPASPQRR	19	1	Q9Y6G9;E9PHI6;C9JGM7	Q9Y6G9	DYNC1LI1	Cytoplasmic dynein 1 light intermediate chain 1	1	DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR	123.87	3.3224e-05	787460000.0	6802.1	6595.6	8582.3	7984.2	6529.6	6275.9	6231.8	7989.2	7505.2	8443.7	True	False	6503.087828604566	7685.4107939688265	6780.9925140688865	7284.237582270199	7388.356850365929	7488.628853587266	7629.439784556964	7708.215307678332	7156.284890148808	6914.464108874118	0.9405049655631901	1.1114976768923082	0.980696754990176	1.053478254796566	1.0685364381143594	1.0830382131821694	1.1034029050444034	1.114795765269141	1.0349731775980056	1.0	12.755401727299056	-7.514799010179592	4.675494560143045	1.075029402595304	1.0200606223600017	0.1820679352722836	0.05099158796455327	0.31148577696149266	18.064935543171682	0.014215530609254342	0.01996622661261926	3.056335246191411e-08	7.514799010179592	-0.05496878023530227	
DFRQPDRHPPEDFR	ddPTM_K562_Methotrexat_30min_R1	1	DFRQPDRHPPEDFR	14	2	Q8IXT5;B9ZVT1	Q8IXT5	RBM12B	RNA-binding protein 12B	0		54.199	0.031488999999999996	11844000.0	1271.4	1215.7	1463.8	1421.4	1424.3	1264.3	1097.2	1268.5	1307.1	1483.0	False	True	1215.5107783313756	1416.573761633196	1156.5683840105835	1296.7880688658674	1611.620415029433	1508.6080816441274	1343.275029945745	1223.886136007355	1246.3332062987677	1214.4143294361845	1.000902862283995	1.1664666064100775	0.9523672077778783	1.067830012733732	1.3270762506381648	1.2422515488140922	1.1061093379632523	1.0077994851852314	1.0262833499975268	1.0	10.246045003654386	-9.203892619649084	4.7609320005766245	1.012338887148083	1.1297466373652894	0.20004406473147407	0.10267368033313669	0.377418720626272	18.060621920297734	0.05649126748481178	0.03098034011338349	6.253272873326005e-10	9.203892619649084	0.1174077502172064	
DFSASYFSGEQEVT(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	1	DFSASYFSGEQEVTPSR	17	0	P49454	P49454	CENPF	Centromere protein F	1	DFSASYFSGEQEVT(0.995)PS(0.005)R	159.04	1.5676999999999997e-41	0.0	378.92	343.98	491.51	408.89	435.8	404.32	286.1	461.42	307.59	387.58	True	False	362.2631305059969	400.8168483397111	388.34876788157015	373.0432485426795	493.1153386715065	482.4491177492318	350.2652078631769	445.1915970646544	293.2902080372106	317.3855062730118	1.1413978374752307	1.262870674361962	1.2235869635065078	1.1753632134095988	1.5536794495188249	1.5200729340621937	1.1035954728250328	1.402684080607339	0.9240819200638776	1.0	8.310092437338238	-9.768226010517822	24.991186223230297	0.9620407442394834	1.2996306910900033	0.4590276750336083	0.14583594259300556	158.6928044822635	584346.19256094	0.13524587700198304	0.038061585105830166	1.7051947602976338e-10	9.768226010517822	0.3375899468505199	
DFTNEAPPAPLPDAS(ph)ASPLSPHRR	ddPTM_K562_Methotrexat_30min_R1	2	DFTNEAPPAPLPDASASPLSPHRR	24	1	A0A494BZV2;Q6WCQ1;Q6WCQ1-2;A0A1W2PPU9	A0A494BZV2	MPRIP	Myosin phosphatase Rho-interacting protein	1	DFTNEAPPAPLPDAS(0.405)AS(0.297)PLS(0.297)PHRR;DFTNEAPPAPLPDAS(0.333)AS(0.333)PLS(0.333)PHRR	55.302	0.011219	21607200.0	1205.13	1104.58	1578.79	1449.08	1050.83	1316.52	1167.66	1383.42	1274.8400000000001	1771.12	True	False	1152.1539281819175	1287.0930703502474	1247.4235544419116	1322.0414062418408	1189.0325638737481	1570.918857586116	1429.5374785512652	1334.764334470079	1215.572966657426	1450.3530054963019	0.794395518756937	0.8874343456197494	0.8600827175967763	0.9115307799079206	0.8198228702721021	1.0831286256745178	0.9856479582100678	0.92030307753479	0.838122141334457	1.0	10.502188369244665	-8.223399842131212	24.999678180985374	0.961722389786494	0.8599359140668723	0.41425170926697663	0.065644878275081	643.2848768236714	422768.7853185989	0.022463006512114858	0.022462520404474	5.978609086786716e-09	8.223399842131212	-0.10178647571962174	
DFTVSAMHGDMDQKER	ddPTM_K562_Methotrexat_30min_R1	1	DFTVSAMHGDMDQKER	16	1	P60842;P60842-2;J3KT12;J3QL52;J3KSZ0	P60842	EIF4A1	Eukaryotic initiation factor 4A-I	0		60.937	0.023043	28743000.0	1675.2	1403.1	2759.0	2178.2	1452.5	1204.8	1242.2	1878.2	1605.1	2512.3	False	True	1601.5602138278423	1634.9384263778363	2179.923603965844	1987.2405878736697	1643.5292093170337	1437.6105487343552	1520.7949710158628	1812.1426414261066	1530.4792513427828	2057.2981253152584	0.7784774574576646	0.7947017528766279	1.0596051088277711	0.9659468228840907	0.7988775127402504	0.6987857185326785	0.7392195386280331	0.8808361895281539	0.7439268196038693	1.0	11.006535156186075	-7.798365978994195	16.65205748444147	0.7951837794441252	0.9036048093616111	0.12881866744552795	0.1095859808300568	9.395880250734185	4235.619810126016	0.03503702260580884	0.03974681890663322	1.5908675414837658e-08	7.798365978994195	0.10842102991748592	
DFY(ph)NS(ph)IVNVAQKR	ddPTM_K562_Methotrexat_30min_R1	1	DFYNSIVNVAQKR	13	1	P56748	P56748	CLDN8	Claudin-8	2	DFY(1)NS(1)IVNVAQKR	58.595	0.031398	0.0	850.77	717.24	724.05	697.06	659.47	974.69	822.12	961.39	928.29	930.23	True	False	813.3711694832347	835.7517190045188	572.0817997286948	635.9498320554674	746.201864143411	1163.0350479298545	1006.5013376038968	927.5773687789605	885.1340005164737	761.756332887001	1.0677576731139433	1.0971378680070576	0.7510036674858304	0.834846793652852	0.979580781843139	1.5267809373136898	1.3212904102671914	1.2176825170110628	1.1619647416147896	1.0	9.57318577863029	-8.08408006263769	9.321752573123833	1.263508464959024	0.9321940486839808	0.48012860453234163	0.1556933805948309	0.3618419882172449	37.976623672339684	0.05318991450433458	0.05324095715092907	8.23986198301081e-09	8.08408006263769	-0.3313144162750432	
DFYLAT(ph)SPPDSFLDDHHLTRPHPER	ddPTM_K562_Methotrexat_30min_R1	2	DFYLATSPPDSFLDDHHLTRPHPER	25	1	Q13131;Q13131-2	Q13131	PRKAA1	5-AMP-activated protein kinase catalytic subunit alpha-1	1	DFY(0.005)LAT(0.458)S(0.458)PPDS(0.078)FLDDHHLTRPHPER;DFY(0.007)LAT(0.456)S(0.456)PPDS(0.082)FLDDHHLTRPHPER	66.63600000000001	0.0011848	54004000.0	5843.1	4964.5	6017.9	5963.2	4822.1	4651.6	4729.299999999999	6389.5	6700.6	8210.099999999999	True	False	5586.244320330391	5784.799242928357	4754.82502946939	5440.415514465277	5456.29067142697	5550.455866942835	5789.965912433843	6164.777663396926	6389.090568529969	6723.171332504395	0.8308942378610339	0.8604271640320532	0.7072294895239875	0.8092037589705022	0.8115650191818763	0.8255710872796216	0.8611956509930365	0.9169448997368529	0.9503090509743145	1.0	12.714926200170096	-9.376580766011957	0.9396583143684221	0.9966320436910431	0.7999040971838489	0.7800969628063921	0.03669318248393685	0.2606049699421089	0.4180517784152971	0.03473776147021236	0.013720963782852976	4.20164382182535e-10	9.376580766011957	-0.19672794650719416	
DGDSYDPYDFS(ph)DT(ph)EEEMPQVHTPK	ddPTM_K562_Methotrexat_30min_R1	2	DGDSYDPYDFSDTEEEMPQVHTPK	24	0	A0A499FHX9;Q7Z6P5;J3KQ69;P25205;P25205-2	A0A499FHX9	MCM3	DNA replication licensing factor MCM3	2	DGDS(0.023)Y(0.013)DPY(0.114)DFS(0.923)DT(0.924)EEEMPQVHT(0.003)PK;DGDS(0.014)Y(0.012)DPY(0.354)DFS(0.809)DT(0.809)EEEMPQVHT(0.001)PK	56.882	0.021081	17654200.0	5302.2	3939.6000000000004	7440.299999999999	5842.2	3851.0	3636.2	3334.8	4511.4	4537.6	6129.3	True	False	5069.1216366750195	4590.551938249679	5878.6827077154985	5330.023396600656	4357.4740000550055	4338.844187672527	4082.7137895215733	4352.731504914135	4326.647966415187	5019.224375868648	1.009941229375253	0.9145938883147097	1.1712332957217337	1.0619217228514954	0.8681568453095669	0.8644451538235185	0.8134152776971645	0.867211979173741	0.8620152522403223	1.0	12.293248725423291	-7.765856947976265	24.93253996798106	0.8685402705374727	1.0399212681390526	0.5268397495509294	0.07396912380521335	82.32741018833948	464651.4948314807	0.02298639545959788	0.026961310680946184	1.7145219599660875e-08	7.765856947976265	0.17138099760157988	
DGDSYDPYDFS(ph)DTEEEMPQVHT(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	DGDSYDPYDFSDTEEEMPQVHTPK	24	0	A0A499FHX9;Q7Z6P5;J3KQ69;P25205;P25205-2	A0A499FHX9	MCM3	DNA replication licensing factor MCM3	2	DGDSYDPYDFS(0.955)DT(0.139)EEEMPQVHT(0.905)PK	92.238	0.0001422	58104000.0	4841.2	3416.1	7537.4	4467.8	2874.2	2914.3	3062.1	3905.1	4096.2	5336.7	True	False	4628.386644689203	3980.552461228228	5955.402744665511	4076.114910706994	3252.207678773853	3477.447229562192	3748.8538727641894	3767.7554195682505	3905.768556071464	4370.171916319679	1.0590857140894765	0.9108457372954866	1.362738779777988	0.9327127144553333	0.7441830072242752	0.7957232109282119	0.8578275510775031	0.8621526776780097	0.8937333887223112	1.0	12.093474319066074	-7.511026965743853	24.962473995135028	0.8478844687802789	1.100359006696498	0.4641006694429276	0.12061525782530899	474.8859470216211	1000215.9262548503	0.03396862772233095	0.04739512117383462	3.08299651821671e-08	7.511026965743853	0.2524745379162192	
DGDSYDPYDFS(ph)DTEEEMPQVHTPK	ddPTM_K562_Methotrexat_30min_R1	2	DGDSYDPYDFSDTEEEMPQVHTPK	24	0	A0A499FHX9;Q7Z6P5;J3KQ69;P25205;P25205-2	A0A499FHX9	MCM3	DNA replication licensing factor MCM3	1	DGDSYDPYDFS(0.903)DT(0.097)EEEMPQVHTPK;DGDSYDPY(0.005)DFS(0.497)DT(0.497)EEEMPQVHTPK	104.89	3.4281e-06	103538000.0	7966.5	5750.9	12395.7	7944.0	5607.0	5236.0	4560.2	6730.4	7198.0	8577.7	True	False	7616.302198817762	6701.138476413874	9794.01196726329	7247.56185385567	6344.418779098528	6247.782896059996	5582.940932882417	6493.688017172968	6863.366551096723	7024.19541038757	1.0842953183726307	0.9540079802597817	1.3943250998939525	1.0317995770928838	0.903223559201703	0.8894659859292363	0.794815720050472	0.9244742832139788	0.9771035898214038	1.0	12.778117265309223	-7.584807338153885	4.730816403564857	0.9056878797038892	1.1381471210121146	0.4463349863642183	0.11416840078634304	0.18374933149136863	8.25756754337901	0.034546877192375966	0.04562610811661938	2.6013133026095436e-08	7.584807338153885	0.23245924130822537	
DGDSYDPYDFSDT(ph)EEEMPQVHT(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	DGDSYDPYDFSDTEEEMPQVHTPK	24	0	A0A499FHX9;Q7Z6P5;J3KQ69;P25205;P25205-2	A0A499FHX9	MCM3	DNA replication licensing factor MCM3	2	DGDSY(0.001)DPY(0.033)DFS(0.449)DT(0.888)EEEMPQVHT(0.627)PK	65.766	0.0031425999999999997	63505000.0	4012.9	2745.9	6517.8	3758.1	2967.7	2749.0	2410.1	3625.3	3272.4	5370.3	True	False	3836.4977209107883	3199.6133026804246	5149.802851007092	3428.633207826661	3358.0045676352224	3280.2053440162217	2950.6262756764845	3497.7961441604007	3120.2668382618654	4397.686630729025	0.8723899729696735	0.7275673715182407	1.1710254239177986	0.7796447304519014	0.7635843227598395	0.7458933797364381	0.670949643173494	0.7953718483985193	0.7095245978780904	1.0	12.102529089309606	-7.485078702306006	24.98296429630022	0.7641551116173251	0.9159321621779563	0.19356072391147194	0.13078709946010075	823.430620193157	544225.149874453	0.03544982948326072	0.052565292050577285	3.2728137997977826e-08	7.485078702306006	0.15177705056063118	
DGDSYDPYDFSDT(ph)EEEMPQVHTPK	ddPTM_K562_Methotrexat_30min_R1	4	DGDSYDPYDFSDTEEEMPQVHTPK	24	0	A0A499FHX9;Q7Z6P5;J3KQ69;P25205;P25205-2	A0A499FHX9	MCM3	DNA replication licensing factor MCM3	1	DGDSYDPYDFS(0.263)DT(0.737)EEEMPQVHTPK;DGDSYDPY(0.002)DFS(0.069)DT(0.928)EEEMPQVHTPK;DGDSYDPY(0.002)DFS(0.33)DT(0.668)EEEMPQVHTPK;DGDSYDPYDFS(0.393)DT(0.607)EEEMPQVHTPK	119.27	2.1120999999999998e-08	311066000.0	16206.999999999998	11007.400000000001	25544.7	15645.000000000002	11292.900000000001	9352.2	9902.699999999999	13435.599999999999	14597.199999999999	19260.4	True	False	15494.55968571386	12826.185756190864	20183.216558980173	14273.4271404295	12778.114291150667	11159.380290399602	12123.632554724509	12963.06233262943	13918.579358109078	15772.154922908081	0.9823996632957852	0.8132170790157293	1.279673998742258	0.9049763466181928	0.8101692098263151	0.7075368169375061	0.7686731847349332	0.8218954477679764	0.8824779762905576	1.0	13.945092166133273	-7.5177825823607565	22.331644702045935	0.8175229914633753	1.018644923308072	0.3097053553717757	0.12795466530431057	62.41746461577008	273518.3711867769	0.03717262158868799	0.049599602369719144	3.035410398977668e-08	7.5177825823607565	0.20112193184469684	
DGEQS(ph)PNVSLMQR	ddPTM_K562_Methotrexat_30min_R1	1	DGEQSPNVSLMQR	13	0	Q58WW2;Q58WW2-2;Q58WW2-4;Q58WW2-3;F2Z305	Q58WW2	DCAF6	DDB1- and CUL4-associated factor 6	1	DGEQS(0.675)PNVS(0.325)LMQR	98.59200000000001	0.0054923	9860400.0	2662.4	2411.7	3166.1	2450.9	2018.3	2235.3	1851.1	2764.4	2690.7	2666.6	True	False	2545.3640838677456	2810.1924331091377	2501.578877316511	2236.0334022677316	2283.7418266193245	2667.2400892977294	2266.2562959647903	2667.1744851231656	2565.6099442950745	2183.652900117686	1.165644999592456	1.2869226757410415	1.1455936413619998	1.0239875587128442	1.0458355476258356	1.2214579016445246	1.0378280796561818	1.221427858328318	1.1749165557203727	1.0	11.092527837313813	-6.954147692132535	8.079733848703563	1.1105020297861625	1.2246393017836608	0.26261481648684915	0.08080183679610528	0.341634367078308	52.567690293344064	0.021109597900659985	0.04407323069554673	1.1113537208353235e-07	6.954147692132535	0.11413727199749824	
DGEQSPNVS(ph)LMQR	ddPTM_K562_Methotrexat_30min_R1	1	DGEQSPNVSLMQR	13	0	Q58WW2;Q58WW2-2;Q58WW2-4;Q58WW2-3;F2Z305	Q58WW2	DCAF6	DDB1- and CUL4-associated factor 6	1	DGEQS(0.009)PNVS(0.991)LMQR	90.697	0.013253000000000001	16072000.0	1629.9	1437.9	2386.1	1760.3	1419.3	1275.9	1443.9	1875.0	1747.4	2023.4	True	False	1558.251547587155	1675.4885348789762	1885.290217985828	1605.9772320420625	1605.9628273897886	1522.4496174719145	1767.731330421674	1809.0551872398821	1666.1637554023919	1656.9426528531192	0.9404378268034648	1.0111928327718056	1.1378125940203863	0.9692412886328332	0.9692325951199654	0.9188306033708417	1.0668633144169388	1.0918031376190587	1.00556513077468	1.0	10.694307956095244														
DGGS(ph)GNSTIIVSR	ddPTM_K562_Methotrexat_30min_R1	1	DGGSGNSTIIVSR	13	0	Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7	Q7Z6Z7-2	HUWE1	E3 ubiquitin-protein ligase HUWE1	1	DGGS(0.964)GNS(0.033)T(0.002)IIVSR	113.67	0.0015293	32619000.0	1188.9	862.76	1305.1	970.09	838.39	1031.2	836.6	1269.8	939.7	1028.4	True	False	1136.637379548664	1005.3164255874445	1031.1773452467637	885.0437158618898	948.652980240488	1230.4648056564295	1024.228846201796	1225.140414270509	896.0135521069176	842.1467946002514	1.3496903233933235	1.1937543811048361	1.2244627087089264	1.050937581828594	1.1264698581329788	1.46110489708686	1.2162117730175235	1.454782494128065	1.06396361994376	1.0	9.71792792114605	-9.981156374645632	24.698234336941855	0.9999999040241491	1.2507478465476296	0.3507237530939181	0.12496835763124074	188.84036752060948	247511.46377261856	0.12369901676125193	0.031938948795489745	1.0443441187801535e-10	9.981156374645632	0.25074794252348054	
DGIDDES(ph)YEAIFK	ddPTM_K562_Methotrexat_30min_R1	1	DGIDDESYEAIFK	13	0	Q13547	Q13547	HDAC1	Histone deacetylase 1	1	DGIDDES(1)YEAIFK	110.64	0.0019366	23995000.0	0.0	0.0	0.0	0.0	0.0	64.889	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	77.42788089045777	0.0	0.0	0.0	0.0											0.0														
DGLNQTTIPVS(ph)PPSTTKPSR	ddPTM_K562_Methotrexat_30min_R1	4	DGLNQTTIPVSPPSTTKPSR	20	1	X6RLN4;Q71RC2-2;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;Q71RC2-6	X6RLN4	LARP4	La-related protein 4	1	DGLNQTT(0.003)IPVS(0.995)PPSTTKPS(0.001)R;DGLNQTTIPVS(0.991)PPS(0.002)T(0.002)T(0.002)KPS(0.002)R;DGLNQTTIPVS(0.983)PPS(0.002)T(0.006)T(0.006)KPS(0.002)R;DGLNQTTIPVS(0.994)PPS(0.001)T(0.001)T(0.001)KPS(0.003)R	112.88	0.0001048	310426000.0	7631.8	5159.61	10838.6	7719.699999999999	5563.5	5110.6	4699.0	7226.7	7713.0	8516.0	True	False	7296.315210059292	6012.1478541254	8563.72597823276	7042.925886607452	6295.197766633613	6098.151120818221	5752.87036612747	6972.532864867444	7354.424313505006	6973.6698782727935	1.0462662181345483	0.8621210867547492	1.2280085131236216	1.0099310706620102	0.9027094595124109	0.8744536560036569	0.8249415969705057	0.9998369562332035	1.0545988614142021	1.0	12.76770235565205	-7.615603741696143	6.055304594224318	0.9341452422468748	1.04152448567511	0.16748046186029952	0.1033118988697235	0.3717926167264457	19.89191086716347	0.031762946548131187	0.041178397813714296	2.4232390464078688e-08	7.615603741696143	0.10737924342823524	
DGPHGDYRGGEGPGHDFR	ddPTM_K562_Methotrexat_30min_R1	2	DGPHGDYRGGEGPGHDFR	18	1	P78332;P78332-3	P78332	RBM6	RNA-binding protein 6	0	;	59.728	0.018619	6524000.0	1581.97	1382.58	1854.23	1733.41	1344.0	1488.13	1192.46	1463.25	1756.57	1938.5700000000002	False	True	1512.428492997393	1611.0278451581992	1465.0524625522232	1581.4446365926444	1520.759557536725	1775.6900613280673	1459.899509851535	1411.786668122005	1674.9074441039131	1587.4761878726265	0.9527251523842983	1.0148359121639072	0.922881535952698	0.9962005406279102	0.9579731457734126	1.1185616986845426	0.9196355328062862	0.8893277763201837	1.0550756331963964	1.0	10.632519236297615														
DGPPLLENAHS(ph)S	ddPTM_K562_Methotrexat_30min_R1	2	DGPPLLENAHSS	12	0	G5E9C8;Q07889	G5E9C8	SOS1	Son of sevenless homolog 1	1	DGPPLLENAHS(0.61)S(0.39);DGPPLLENAHS(0.581)S(0.419)	141.59	2.3403e-06	32563400.0	6686.7	5439.6	8148.5	7123.5	5855.7	5472.799999999999	5009.8	6489.1	6602.9	8320.3	True	False	6392.760674428507	6338.401442609137	6438.241205841131	6498.993814947245	6625.827188294493	6530.341144682414	6133.375177745346	6260.874674943104	6295.932620205136	6813.41304464456	0.9382611376325274	0.9302828701382212	0.9449362843049243	0.9538529034366332	0.9724681514065096	0.9584537297082488	0.9001913046452199	0.9189043191597258	0.9240497499493047	1.0	12.734161953544245	-7.284531835332958	0.0024699315658460353	1.8781573612144693	1.0399638836056774e-08	0.09718533900771587	0.02588431031369346	313193.6519334993	176.6240095306939	66340.24092063331	67969.53603036626	5.19359601202309e-08	7.284531835332958	-1.8781573508148304	
DGPPLLENAHSS(ph)	ddPTM_K562_Methotrexat_30min_R1	1	DGPPLLENAHSS	12	0	G5E9C8;Q07889	G5E9C8	SOS1	Son of sevenless homolog 1	1	DGPPLLENAHS(0.382)S(0.618)	153.0	6.1069e-08	28174000.0	3327.9	2967.7	4574.7	4115.2	3241.6	3097.5	3223.2	3761.1	3900.0	4530.6	True	False	3181.6095007149456	3458.0619827250416	3614.5329869744623	3754.42680526018	3667.9272185350064	3696.04803677346	3946.0846486703654	3628.819981188228	3718.6898512471807	3710.0644375883894	0.8575617901620735	0.9320759897563521	0.9742507300827302	1.0119573038199376	0.9886424562801467	0.9962220600071193	1.0636162026434757	0.9781016050349326	1.0023248689622215	1.0	11.857228528915686	-6.260199853989713	1.08386910358123	1.007825782846097	0.7799001473179025	0.8236924910422432	0.02164425818080825	0.6901726340238136	0.665300970991624	0.006960865815812736	0.18162919759303503	5.492880438672672e-07	6.260199853989713	-0.22792563552819456	
DGQVINETS(ph)QHHDDLE	ddPTM_K562_Methotrexat_30min_R1	2	DGQVINETSQHHDDLE	16	0	P08670	P08670	VIM	Vimentin	1	DGQVINET(0.091)S(0.909)QHHDDLE;DGQVINET(0.172)S(0.828)QHHDDLE	152.34	1.5022e-11	112958000.0	4305.9	3034.3	3793.0	3936.5	3067.2	2780.2	2868.9	3554.9	3838.2999999999997	4286.1	True	False	4116.6177917390805	3535.666500718604	2996.901134411906	3591.393156810531	3470.590561664169	3317.4343024495784	3512.323854731453	3429.8721520634995	3659.858270780014	3509.845756841827	1.172877122510144	1.0073566605673323	0.853855508769858	1.0232338984725302	0.9888156922277461	0.9451795127984822	1.0007060418210103	0.9772144959297904	1.0427404861440888	1.0	11.777191916123872	-6.28547152403687	4.409943929125228	0.9770495295172947	1.182899151551566	0.5797606829880133	0.04907155370627641	0.12397982107616046	5.68088339485257	0.012136263104473386	0.07532226782136534	5.182370708315992e-07	6.28547152403687	0.20584962203427137	
DGQVINETSQHHDDLE	ddPTM_K562_Methotrexat_30min_R1	3	DGQVINETSQHHDDLE	16	0	P08670	P08670	VIM	Vimentin	0	;;	126.07	0.00027716	172220000.0	15922.9	13955.1	20232.6	17787.8	14505.1	13209.7	14322.8	16125.7	16810.2	19206.0	False	True	15222.948381542128	16260.943078857781	15986.053754838473	16228.371191341124	16412.77489436456	15762.28757106259	17535.052496269513	15558.549990866226	16028.697471137275	15727.607290054862	0.9679125438977708	1.0339108027665573	1.0164326626432894	1.0318398019514967	1.043564643475232	1.0022050576650434	1.1149218169605215	0.9892509206218839	1.0191440551337267	1.0	13.941011583466492	-6.258987916746682	23.85986525582023	1.0297507570925108	0.967912503151977	0.22527995385530675	0.033227378574528836	175.4874186664328	1707803.9443306192	0.007923882989341787	0.05201004665948767	5.508230215863368e-07	6.258987916746682	-0.06183825394053388	
DGQWFTDWDAVPHSR	ddPTM_K562_Methotrexat_30min_R1	4	DGQWFTDWDAVPHSR	15	0	Q08J23-3;Q08J23-2;Q08J23	Q08J23-3	NSUN2	tRNA (cytosine(34)-C(5))-methyltransferase	0	;;;	169.15	3.0163000000000002e-05	50572500.0	14100.5	12934.7	17524.1	16911.2	13367.099999999999	13652.4	12303.5	15243.3	16000.8	17570.3	False	True	13480.658903461968	15071.939322692187	13846.030890995959	15428.621352331831	15125.10794758122	16290.533080628249	15062.873068663397	14707.184499015315	15256.92630047075	14388.148410311926	0.9369279853827778	1.047524594053408	0.9623219399844782	1.072314582276216	1.051219901008327	1.132218866254736	1.0468944744737203	1.02217353335574	1.0603814935308962	1.0	13.812593325266654	-4.68517224518811	0.7107155833018083	1.0556913719901695	6.090409205682284e-12	0.3689401864332703	0.04226497274144907	25.16131611860618	1.6052032327191825	0.016595694295993724	34.75798979370747	2.0645611694536077e-05	4.68517224518811	-1.055691371984079	
DGSGGASGTLQPS(ph)SGGGSSNSRER	ddPTM_K562_Methotrexat_30min_R1	1	DGSGGASGTLQPSSGGGSSNSRER	24	1	Q9NYV4-2;J3QSD7;Q9NYV4-3;Q9NYV4	Q9NYV4-2	CDK12	Cyclin-dependent kinase 12	1	DGSGGASGTLQPS(0.357)S(0.357)GGGS(0.016)S(0.016)NS(0.253)RER	92.412	5.6078999999999996e-05	5960100.0	1336.3	1223.1	1595.3	1735.9	1296.3	1237.1	1044.7	1340.4	1590.0	1460.6	True	False	1277.557852040441	1425.1964858547021	1260.4683310644107	1583.7163421586179	1466.7861714545068	1476.1520665996607	1279.0005685238066	1293.2573722540478	1516.081247046929	1196.071186496623	1.068128608450554	1.1915649352186162	1.0538405617448334	1.3240987326159364	1.2263368501926937	1.2341674001222405	1.0693348213412694	1.0812545163320002	1.2675510154940175	1.0	10.224087541547092	-12.113095191888808	7.485215892079424	0.9999999612779464	1.168512651238355	0.23560841865879045	0.09103740239646363	5.9503792101515186e-08	6.9160833496401895e-09	0.0890799025869967	0.02160504502301767	7.707345152357358e-13	12.113095191888808	0.16851268996040858	
DGSGGASGTLQPSSGGGSSNS(ph)RER	ddPTM_K562_Methotrexat_30min_R1	1	DGSGGASGTLQPSSGGGSSNSRER	24	1	Q9NYV4-2;J3QSD7;Q9NYV4-3;Q9NYV4	Q9NYV4-2	CDK12	Cyclin-dependent kinase 12	1	DGSGGASGTLQPS(0.009)S(0.249)GGGS(0.158)S(0.158)NS(0.426)RER	108.69	1.5557e-07	4779700.0	1315.2	1183.7	1453.6	1386.1	989.03	1143.1	1033.8	1331.5	1219.7	1630.5	True	False	1257.3853827760136	1379.2863055401945	1148.509224619336	1264.5827650590813	1119.1047806477284	1363.987896960692	1265.6559660571563	1284.6703902986153	1162.9964132220994	1335.2006501319609	0.941720169662697	1.0330180002562734	0.8601772508917115	0.9471106570642396	0.8381547601382046	1.021560240272416	0.9479144321357758	0.9621553061494155	0.8710274467789975	1.0	10.38284084694822														
DGSIS(ph)PVSSECSVVER	ddPTM_K562_Methotrexat_30min_R1	2	DGSISPVSSECSVVER	16	0	H0YCZ0;H7BY22;H0YEM9;Q8NCP5-3;Q8NCP5-4;Q8NCP5-2;Q8NCP5	H0YCZ0	ZBTB44	Zinc finger and BTB domain-containing protein 44	1	DGS(0.013)IS(0.935)PVS(0.042)S(0.009)ECSVVER;DGS(0.007)IS(0.992)PVS(0.001)SECSVVER	167.92	8.585800000000001e-08	43216000.0	4177.1	3784.0	5355.3	4328.8	3659.3	3684.3999999999996	3303.5	4105.6	4184.9	4562.1	True	False	3993.479685518316	4409.241682997457	4231.29571450463	3949.300824895571	4140.562089950995	4396.358155508681	4044.393967759544	3961.203720923767	3990.344912431878	3735.859482347147	1.068958750827885	1.1802482678570236	1.1326163991174028	1.0571331292188548	1.108329183556332	1.176799656486694	1.082587283293255	1.060319249062077	1.0681196472424184	1.0	11.867224476344182	-9.784475586687314	0.919905574189852	1.0037030227753918	1.1204016080533858	0.4603774500932454	0.039384835287045596	0.49115581913613543	0.8978160386723565	0.03826732551662797	0.013737337363758909	1.6425719921776833e-10	9.784475586687314	0.11669858527799404	
DGSLASNPYS(ph)GDLTK	ddPTM_K562_Methotrexat_30min_R1	1	DGSLASNPYSGDLTK	15	0	F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5;H0Y5H6;H7C2T8	F8W726	UBAP2L	Ubiquitin-associated protein 2-like	1	DGSLAS(0.001)NPYS(0.999)GDLTK	134.85	9.4724e-14	0.0	1927.7	1477.3	2279.7	2534.5	1233.2	1334.2	1487.1	2039.7	2264.3	1964.0	True	False	1842.9606161628055	1721.3987151934857	1801.2221239437965	2312.304320065106	1395.3874154421799	1592.0152673650196	1820.6200301060126	1967.9625948870341	2159.0331872253837	1608.3005684508869	1.1459055927201114	1.0703215238253225	1.1199536699030899	1.4377314573060895	0.8676160680501501	0.9898742179134132	1.132014789909346	1.2236286136381667	1.342431402175628	1.0	10.651321335514448	-12.162197805705016	4.547321354956441	0.9999779881779439	1.1420462454974953	0.07505397091761146	0.1544201828872877	3.5598724958993804e-05	6.558809122065945e-06	0.15445030615719202	0.037453899480342806	6.883387111115916e-13	12.162197805705016	0.14206825731955142	
DGSS(ph)PPLLEK	ddPTM_K562_Methotrexat_30min_R1	2	DGSSPPLLEK	10	0	H7BYY2;Q6W2J9-4;Q6W2J9-2;Q6W2J9;Q6W2J9-3	H7BYY2	BCOR	BCL-6 corepressor	1	DGS(0.025)S(0.975)PPLLEK;DGS(0.194)S(0.806)PPLLEK	132.56	0.00088955	66984000.0	14045.5	9895.900000000001	20353.0	14490.0	9639.2	8803.3	8580.6	12373.3	12492.7	15816.0	True	False	13428.076637606842	11531.02927346051	16081.18344020182	13219.684197176319	10906.923755214295	10504.413133858845	10505.01797480174	11938.124025746802	11911.917103762999	12951.569139826492	1.0367914877831348	0.8903190917618024	1.2416397786698805	1.020701357067644	0.8421314543019466	0.8110533187486477	0.8111000189543421	0.9217511713724854	0.9197277160134574	1.0	13.660839276928963	-7.689387290220428	5.693162810335905	0.8732570222010564	1.0531099281639646	0.40875844029036146	0.09591335835562112	0.19817403554158597	11.362065621369235	0.029049302338585287	0.03739361599822529	2.0446204949526123e-08	7.689387290220428	0.17985290596290826	
DGVS(ph)LGAVSSTEEAS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	DGVSLGAVSSTEEASR	16	0	H3BS66;A0A2R8Y7R4;B2RUZ4	H3BS66	SMIM1	Small integral membrane protein 1	2	DGVS(0.582)LGAVS(0.11)S(0.142)T(0.184)EEAS(0.981)R	92.439	0.012823	10852000.0	3110.6	2341.2	2671.0	3251.1	2326.2	2401.5	2173.9	2449.1	3304.5	2876.7	True	False	2973.8617485272744	2728.043506404241	2110.39360137469	2966.081110658379	2632.1360734686973	2865.555887106202	2661.4524130505433	2362.963764836904	3150.8745162682853	2355.701754207062	1.2624101260765446	1.1580598017266877	0.8958662095512411	1.2591072300902424	1.1173469089488723	1.216434076167999	1.1297917524140904	1.0030827377094205	1.3375523920382193	1.0	11.201941181655952	-12.78222989338687	6.770784781373457	0.9951483237806417	1.144665953552309	0.11845258938509351	0.12345461691021613	0.008937027203797297	0.00028744304047455174	0.11815333095952195	0.027884456937017688	1.6510875651693531e-13	12.78222989338687	0.14951762977166727	
DGVSLGAVS(ph)STEEASR	ddPTM_K562_Methotrexat_30min_R1	1	DGVSLGAVSSTEEASR	16	0	H3BS66;A0A2R8Y7R4;B2RUZ4	H3BS66	SMIM1	Small integral membrane protein 1	1	DGVSLGAVS(0.618)S(0.191)T(0.191)EEASR	123.63	0.00028164	83947000.0	3261.0	2678.0	4333.0	3022.4	3119.8	2718.1	2450.4	3276.1	3129.3	3568.6	True	False	3117.650344611147	3120.4939817830873	3423.562513948533	2757.430884578724	3530.108383633243	3243.3343563370263	2999.964576539424	3160.877706088842	2983.8195260276443	2922.2919595589797	1.0668510839285374	1.067824168483843	1.171533358516718	0.9435850088691563	1.207993052195234	1.1098597954006268	1.0265793486945658	1.081643364123641	1.0210545583124933	1.0	11.512884606392198	-9.704082592510442	1.07694414997684	1.0004156948907066	1.091100165643893	0.1622227043926624	0.06864820450904541	0.8908840078553001	2.0842160166579413	0.0625081165254549	0.021313889455240268	1.9765937031217169e-10	9.704082592510442	0.09068447075318642	
DGWS(ph)LDRDR	ddPTM_K562_Methotrexat_30min_R1	2	DGWSLDRDR	9	1	A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37	A0A494C001	RBM15	Putative RNA-binding protein 15	1	DGWS(1)LDRDR;DGWS(1)LDRDR	144.7	1.011e-06	25197000.0	6482.700000000001	4763.5	7000.6	5602.6	5776.1	4713.5	4443.7	5827.299999999999	6044.299999999999	6079.1	True	False	6197.728270165809	5550.587409344189	5531.269728859473	5111.428756597657	6535.75839307134	5624.317165885938	5440.312842298497	5622.350556054918	5763.301812280341	4978.116082316592	1.2449947264551662	1.114997584942052	1.1111170646477708	1.026779743998864	1.3128979487416637	1.1298083598059918	1.0928457176046444	1.1294133087869918	1.1577274850526105	1.0	12.281384156891416	-15.588047606481737	0.31943376342645635	1.1811591266259102e-09	1.149784532596141	0.25413046516789184	0.0757438934851075	361.2680499191735	4.160017600200674	241.6601760181056	0.06894061833595169	2.581977144014898e-16	15.588047606481737	1.149784531414982	
DGWS(ph)LDRDRGDRDLPSSR	ddPTM_K562_Methotrexat_30min_R1	1	DGWSLDRDRGDRDLPSSR	18	3	A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37	A0A494C001	RBM15	Putative RNA-binding protein 15	1	DGWS(1)LDRDRGDRDLPSSR	58.79600000000001	0.029932	106610000.0	697.27	500.46	717.02	801.78	634.96	547.36	452.49	515.02	673.42	752.77	True	False	666.6188456875242	583.15250863449	566.5273006580608	731.4891922437567	718.4683695338689	653.1295733360193	553.9724009297759	496.9064546838851	642.1128511863785	616.4360585095596	1.081407935965489	0.9460064845078275	0.9190366021543743	1.1866424459535618	1.1655196992710104	1.0595252570318137	0.8986696889036463	0.8060956977197645	1.041653618931542	1.0	9.26780744473481	-8.756097913793177	24.84125569454692	0.9204460516608886	1.0587100441076494	0.2708175437973259	0.09750484479329377	160.5412874411225	746624.9809545442	0.04083776692264272	0.030679515585416706	1.753485125564267e-09	8.756097913793177	0.1382639924467608	
DGYDYDGYR	ddPTM_K562_Methotrexat_30min_R1	2	DGYDYDGYR	9	0	J3KTL2;Q07955;Q07955-3;Q07955-2	J3KTL2	SRSF1	Serine/arginine-rich splicing factor 1	0	;	137.13	0.0011134	183807000.0	5974.2	4817.299999999999	6706.0	5553.9	5026.9	4294.9	4188.6	5483.200000000001	6400.299999999999	6188.1	False	True	5711.581321305095	5613.276944900544	5298.502242912265	5066.99820998603	5688.025461146845	5124.8286402383665	5128.000173560657	5290.352748092656	6102.751449983932	5067.375126085002	1.127128183564693	1.1077287165904568	1.0456108164634397	0.999925619065178	1.1224796506315393	1.0113379240186136	1.011963797028481	1.0440025884130515	1.204322020402474	1.0	12.307022916859907	-6.6706444321356715	4.584182238147122	1.053915456322472	1.1220837210547026	0.14668402173856343	0.060791754910132556	0.38508417885624924	13.935315305409066	0.015537484356128265	0.043966368598858	2.1347920060030494e-07	6.6706444321356715	0.06816826473223059	
DGYGGSRDS(ph)YSSSR	ddPTM_K562_Methotrexat_30min_R1	1	DGYGGSRDSYSSSR	14	1	P38159;P38159-2;H3BUY5;Q96E39	P38159;Q96E39	RBMX;RBMXL1	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1	1	DGYGGS(0.013)RDS(0.987)YSSSR	165.24	4.6026e-05	10951000.0	3522.0	3274.5	3677.7	3787.9	2785.4	2901.1	2799.2	2813.2	3123.4	3811.3	True	False	3367.177097123724	3815.555468016699	2905.8010287441766	3455.8206880941475	3151.728922293745	3461.696516378848	3426.9918554722276	2714.2581614630603	2978.1938157398604	3121.0366377478977	1.0788649695421193	1.2225282529108525	0.9310371411855541	1.1072669401881248	1.0098340032842403	1.1091495929624096	1.0980299987587148	0.8696655875919599	0.9542322508232037	1.0	11.607809577768924	-9.250217033121606	24.925116277959656	0.9339616887201374	1.078844182471161	0.40687251876672004	0.07632480231937155	630.9653371803741	1401393.8084291008	0.035397650840862854	0.02020259237861055	5.620603725010114e-10	9.250217033121606	0.14488249375102358	
DHASQLS(ph)PVLSR	ddPTM_K562_Methotrexat_30min_R1	1	DHASQLSPVLSR	12	0	A0A0J9YYE2;Q8IXZ2	A0A0J9YYE2	ZC3H3	Zinc finger CCCH domain-containing protein 3	1	DHAS(0.018)QLS(0.981)PVLS(0.001)R	109.55	0.0023361999999999996	14063000.0	681.26	382.09	1053.9	624.42	573.46	632.51	558.79	760.91	576.89	647.18	True	False	651.3126261176913	445.22387808047	832.700792395651	569.6780680745921	648.880041566228	754.7336057270644	684.112881866007	734.1483640121066	550.0705098169196	529.9694306975791	1.2289626314113864	0.8400935078357978	1.5712241955155748	1.0749262789077212	1.2243725844944136	1.4241078107724752	1.2908534761439627	1.3852654917204834	1.0379287520279843	1.0	9.049765335388456	-5.883815071347424	20.169085621190533	1.223121326151459	2.521764300354275	0.0	0.21099824945014692	53350.39556930638	10261098.820496427	0.049011884174510245	345755.0466805865	1.306727192361088e-06	5.883815071347424	1.2986429742028158	
DHGNIKAFISIHSYSQLLMY(ph)PYGYK	ddPTM_K562_Methotrexat_30min_R1	1	DHGNIKAFISIHSYSQLLMYPYGYK	25	1	S4R433;C9JUZ4;C9JUF9;P15085	S4R433	CPA1	Carboxypeptidase A1	1	DHGNIKAFISIHSYS(0.004)QLLMY(0.354)PY(0.321)GY(0.321)K	53.342	0.014851	0.0	1015.2	669.48	1565.4	1262.7	669.28	721.7	717.63	725.57	704.89	934.89	True	False	970.5730235661574	780.1001907857129	1236.8439324567348	1152.0010514682224	757.3020510923958	861.1583109408892	878.576795242404	700.0512918430089	672.1198177552885	765.5723617306772	1.2677743765096863	1.0189764283315996	1.6155807005110348	1.5047578897231506	0.9891972189022272	1.1248555381415903	1.1476077757774137	0.9144155756360518	0.8779311419182807	1.0	9.580394937161582	-8.387466861621483	1.1031454434164314	0.9508633477259851	1.3246696603093726	0.4256633019447138	0.17805802115620284	0.5289931573750285	1.3308932207507456	0.10925582728593841	0.08765102706704471	4.0976337517920095e-09	8.387466861621483	0.3738063125833875	
DHS(ph)PTPSVFNS(ph)DEERYR	ddPTM_K562_Methotrexat_30min_R1	3	DHSPTPSVFNSDEERYR	17	1	Q6UN15-5;Q6UN15;Q6UN15-3	Q6UN15-5	FIP1L1	Pre-mRNA 3-end-processing factor FIP1	2	DHS(0.968)PT(0.032)PSVFNS(1)DEERYR;DHS(0.959)PT(0.041)PSVFNS(1)DEERYR;DHS(0.987)PT(0.013)PSVFNS(1)DEERYR	116.27	0.001468	217355000.0	8324.2	7211.299999999999	12374.599999999999	9610.8	8651.2	7874.9	7636.0	8818.5	9041.7	9778.4	True	False	7958.2781351156455	8402.844753858237	9777.34056891473	8768.236085729617	9788.984437620327	9396.612973296955	9348.567379389091	8508.348356626615	8621.35334051837	8007.437005366678	0.993860848331609	1.0493800635867072	1.2210324679871776	1.0950115598602952	1.2224865997771366	1.173485719213181	1.167485597841553	1.0625557654620599	1.076668269102865	1.0	12.96712482800203	-9.804865632720567	1.5721487123523972	1.0080533519414094	1.1343303021165358	0.24221554244011057	0.07019422591898494	0.5314423397830529	2.6997542287445286	0.06968069983343948	0.020937883096359862	1.5672358854986173e-10	9.804865632720567	0.1262769501751264	
DHS(ph)PTPSVFNSDEER	ddPTM_K562_Methotrexat_30min_R1	4	DHSPTPSVFNSDEER	15	0	Q6UN15-5;Q6UN15;Q6UN15-3	Q6UN15-5	FIP1L1	Pre-mRNA 3-end-processing factor FIP1	1	DHS(0.955)PT(0.045)PSVFNSDEER;DHS(0.916)PT(0.084)PSVFNSDEER;DHS(0.997)PT(0.003)PSVFNSDEER;DHS(0.99)PT(0.01)PSVFNSDEER	156.6	4.0517e-09	75541000.0	6898.4	6247.5	8634.3	5958.5	5528.9	5504.700000000001	4703.3099999999995	6386.0	6467.299999999999	7439.499999999999	True	False	6595.154595910928	7279.793185657143	6822.078424690933	5436.127556168054	6256.047260167263	6568.405368208837	5758.146993341344	6161.400760380742	6166.636634607924	6092.134459771071	1.082568784300726	1.1949495261026628	1.1198174416109805	0.8923190372873568	1.0269056439050348	1.0781780033882677	0.9451772660903682	1.0113697918302798	1.0122292400682917	1.0	12.572732068625209	-7.087876829322516	8.26245504585243	0.9985264801445307	1.1433620191365388	0.5863417804319349	0.0529116552273532	0.20552196480354196	17.554765331047925	0.014120129396007926	0.024591157759382434	8.168139959177245e-08	7.087876829322516	0.14483553899200807	
DHS(ph)PTPSVFNSDEERYR	ddPTM_K562_Methotrexat_30min_R1	3	DHSPTPSVFNSDEERYR	17	1	Q6UN15-5;Q6UN15;Q6UN15-3	Q6UN15-5	FIP1L1	Pre-mRNA 3-end-processing factor FIP1	1	DHS(0.57)PT(0.424)PS(0.006)VFNSDEERYR;DHS(0.879)PT(0.121)PSVFNSDEERYR;DHS(0.969)PT(0.031)PSVFNSDEERYR	92.575	0.0041796	195850000.0	2898.04	2341.85	3415.56	3543.97	2649.6000000000004	2397.66	2313.21	2466.2599999999998	2698.3399999999997	3226.0499999999997	True	False	2770.6456316151157	2728.800907856132	2698.6806323891174	3233.275652468389	2998.0688420009724	2860.973861452865	2832.0062267779786	2379.520237910526	2572.894762362646	2641.7810839363465	1.048779419484205	1.0329398315586857	1.0215383283644337	1.2238999181759205	1.1348664960284085	1.082971590208343	1.0720063990155422	0.9007257461185835	0.973924288430797	1.0	11.367295204613624	-9.152562993417511	5.58524862364112	0.9537630917782001	1.091735853664294	0.5030682750721248	0.059265136494326645	0.19626239157766134	8.456726926782176	0.031001705735620756	0.01762993026058802	7.037801388393983e-10	9.152562993417511	0.13797276188609398	
DHSPT(ph)PSVFNSDEERYR	ddPTM_K562_Methotrexat_30min_R1	1	DHSPTPSVFNSDEERYR	17	1	Q6UN15-5;Q6UN15;Q6UN15-3	Q6UN15-5	FIP1L1	Pre-mRNA 3-end-processing factor FIP1	1	DHS(0.136)PT(0.857)PS(0.006)VFNSDEERYR	75.316	0.02002	48799000.0	1220.2	1071.9	1602.9	1450.3	983.23	1156.7	1049.8	1249.5	1483.1	1473.1	True	False	1166.5614690262264	1249.0132558152686	1266.4731949245556	1323.1544507360124	1112.54197898574	1380.215904482925	1285.2443733476514	1205.5543767766585	1414.151004714024	1206.3073153691455	0.9670516411228458	1.0354022063051607	1.049876079493888	1.0968634889950164	0.9222707719759519	1.1441660735188042	1.0654369388072145	0.9993758318606759	1.1722974624267082	1.0	10.236381775548013	-8.284558223056607	24.990864708456137	1.0755400916356865	1.0220296578103183	0.1705586372660879	0.06723813272424095	1694.47467020924	1831674.9549014794	0.022955425893508147	0.020260382764387134	5.193280458824484e-09	8.284558223056607	-0.05351043382536824	
DHT(ph)VSGDEDYCPR	ddPTM_K562_Methotrexat_30min_R1	1	DHTVSGDEDYCPR	13	0	Q9UIG0-2;Q9UIG0	Q9UIG0-2	BAZ1B	Tyrosine-protein kinase BAZ1B	1	DHT(0.819)VS(0.181)GDEDYCPR	208.51	6.2029e-17	24476000.0	503.34	416.56	874.26	624.03	494.96	513.5	499.66	556.98	675.11	710.77	True	False	481.2137762822983	485.3894596906503	690.7647734697999	569.3222587690781	560.0559156237928	612.7266075490464	611.7214741730687	537.3906977007307	643.7242834552529	582.0426654978808	0.8267671853070544	0.8339413731387663	1.1867940520802165	0.9781452331884956	0.9622248484906506	1.052717685266111	1.050990778570847	0.9232840297730499	1.105974392623966	1.0	9.184981100719508	-6.670847164671643	11.741161644277788	1.0266681888077138	0.8291534809541751	0.5602355831139813	0.0715001331297752	0.3422703981479477	42.285370344258176	0.017520985118158854	0.046386216946351436	2.133795698623242e-07	6.670847164671643	-0.19751470785353875	
DHTVS(ph)GDEDYCPR	ddPTM_K562_Methotrexat_30min_R1	1	DHTVSGDEDYCPR	13	0	Q9UIG0-2;Q9UIG0	Q9UIG0-2	BAZ1B	Tyrosine-protein kinase BAZ1B	1	DHT(0.324)VS(0.676)GDEDYCPR	142.39	4.6006e-06	22494000.0	1286.9	766.38	1446.7	1116.6	1008.0	799.36	828.28	1032.3	1038.8	1190.3	True	False	1230.3294168905506	893.0112687673345	1143.057440325258	1018.7094116333387	1140.5696681525437	953.8250068362329	1014.0428744107382	995.9934238867897	990.5064147373262	974.7251357571747	1.2622321634650577	0.916167272195803	1.1726972029271836	1.0451247990460373	1.1701449222057247	0.9785579255584638	1.0403372573571945	1.021819780109696	1.0161904914536675	1.0	9.9288516381898	-8.27497309993019	24.94153778673523	1.014554587315406	1.1018382446021315	0.2510481711514695	0.0867933954956161	1231.1876481524148	2268968.867976992	0.028347581505031822	0.02513866155497485	5.309173280724609e-09	8.27497309993019	0.08728365728672549	
DIAINIS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	DIAINISR	8	0	A0A087X1N6;J3QRU7;Q6QNY1-2;Q6QNY1	A0A087X1N6	BLOC1S2	Biogenesis of lysosome-related organelles complex 1 subunit 2	1	DIAINIS(1)R	124.92	0.0014904999999999999	11107000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	65.471	64.763	73.389	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	63.16834782068393	61.75218226572341	60.097540946049996	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0510970470054777	1.027532596070092	1.0	5.9092340552494615	-9.260709930834198	24.999999998383068	1.0294861834228242	1.1326742409629431e-09	0.9993943085848875	0.011577103959118205	1.259140648567262	43155.76400512995	0.005398267977801437	0.002878380037537344	5.486432863267904e-10	9.260709930834198	-1.02948618229015	
DIDEVSSLLR	ddPTM_K562_Methotrexat_30min_R1	3	DIDEVSSLLR	10	0	H7C4C8;P50990-2;P50990;P50990-3	H7C4C8	CCT8	T-complex protein 1 subunit theta	0	;;	172.59	2.2618000000000003e-07	29115700.0	6870.2	6408.299999999999	9433.400000000001	8048.2	6935.200000000001	6688.7	6211.0	7175.5	6862.8	7696.9	False	True	6568.194234145201	7467.162652524477	7453.458255038564	7342.626801636607	7847.300359693972	7981.196611320946	7603.974855079311	6923.1335978878815	6543.749925933119	6302.91682551407	1.0420880389151406	1.1847154038742136	1.1825411093586269	1.164956956422749	1.2450267990096697	1.2662703367769723	1.2064215768005355	1.098401547972708	1.0382097855780297	1.0	12.621803909442415	-9.570869758669536	2.4120438716059875	1.0122692832727442	1.1888734382365471	0.5783195629429664	0.056987534086525085	0.22520104847975647	2.4392100066160296	0.05150661331352582	0.016498154032588544	2.686149879058353e-10	9.570869758669536	0.17660415496380288	
DIDIHEVR	ddPTM_K562_Methotrexat_30min_R1	6	DIDIHEVR	8	0	A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;A0A1X7SBS1;Q5RI18;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7	A0A1W2PPS1	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	0	;;;;;	153.08	2.5271e-12	223958000.0	65016.399999999994	52390.9	71656.9	62525.799999999996	56210.2	51050.7	51290.3	64932.9	66425.7	71217.1	False	True	62158.35690443923	61047.60573196393	56617.09593947806	57044.26019156712	63602.82654840091	60915.52526583078	62793.45540323211	62649.17310268192	63337.58370563849	58318.99308219124	1.065833849648896	1.046787718812757	0.9708174463795245	0.9781420627611387	1.0906022752958535	1.0445229254898167	1.0767239296250337	1.074249910563236	1.086054137052304	1.0	15.831678190300206	-7.769249286137796	24.999955706211203	1.0655978140831597	1.0144534552731965	0.2848960612354313	0.035913274071646635	222.5952206779204	712537.2230933324	0.011407679071380619	0.013165184369031507	1.7011817454385426e-08	7.769249286137796	-0.05114435880996315	
DIERDS(ph)RES(ph)AS(ph)S(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	DIERDSRESASSR	13	2	Q2M3C7-2;Q2M3C7	Q2M3C7-2	SPHKAP	A-kinase anchor protein SPHKAP	4	DIERDS(1)RES(1)AS(1)S(1)R	124.42	0.00056386	1241100.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
DIERDS(ph)RESASS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	DIERDSRESASSR	13	2	Q2M3C7-2;Q2M3C7	Q2M3C7-2	SPHKAP	A-kinase anchor protein SPHKAP	2	DIERDS(0.999)RES(0.135)AS(0.033)S(0.832)R	121.45	0.0054323999999999996	1565400.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
DIS(ph)LDSELHDLR	ddPTM_K562_Methotrexat_30min_R1	2	DISLDSELHDLR	12	0	H0YJ97;Q15643-2;Q15643	H0YJ97	TRIP11	Thyroid receptor-interacting protein 11	1	DIS(1)LDSELHDLR;DIS(1)LDSELHDLR	131.86	9.1082e-05	6233600.0	4030.7	3249.3	4423.4	4069.1000000000004	3117.7	3313.2	3322.6	3665.0	3683.5	4649.8	True	False	3853.515254223904	3786.191596343459	3494.988789337624	3712.368320685312	3527.7321968245897	3953.429009019475	4067.7776289625695	3536.0998726582256	3512.2548889920527	3807.6761625167705	1.0120386003826636	0.9943575647570011	0.9178797356095355	0.9749695515680454	0.9264790508058476	1.0382786876514114	1.068309765679726	0.9286766315549692	0.9224142860590717	1.0	11.894695069348426	-6.531474107633762	24.864108261320357	0.9726658051471468	1.0076183735356181	0.06585360781311234	0.048805546461506207	484.4983291086997	1401526.5897221367	0.013315392167569542	0.03535167651447103	2.941209041569473e-07	6.531474107633762	0.03495256838847127	
DIS(ph)NGALAFTPLDTADPAKSPK	ddPTM_K562_Methotrexat_30min_R1	1	DISNGALAFTPLDTADPAKSPK	22	1	P00519-2;P00519	P00519-2	ABL1	Tyrosine-protein kinase ABL1	1	DIS(0.984)NGALAFT(0.013)PLDT(0.002)ADPAKSPK	55.163000000000004	0.020730000000000002	14758000.0	1480.7	1000.5	1754.4	1601.8	1067.6	916.16	960.97	1168.9	989.55	1723.7	True	False	1415.6102009401193	1165.8156194077585	1386.1754152945546	1461.3726809549364	1208.0081128171187	1093.1949537918874	1176.4919846217308	1127.7891244611735	943.5460364876021	1411.521227005496	1.0028968561410145	0.8259285068500207	0.9820436198719363	1.0353175375585382	0.8558200115628973	0.7744799956788966	0.833492236682566	0.7989884267300376	0.6684603946688846	1.0	10.46303510942227	-7.960783516762737	7.045202569672554	0.8047915655075895	0.9530685310090438	0.35853634379620514	0.09205527670777161	0.21411979556621824	29.380508327434544	0.027974154549412312	0.03157579950579702	1.0945018078101195e-08	7.960783516762737	0.1482769655014543	
DIS(ph)SSLNSLADSNAR	ddPTM_K562_Methotrexat_30min_R1	1	DISSSLNSLADSNAR	15	0	O94776	O94776	MTA2	Metastasis-associated protein MTA2	1	DIS(0.603)S(0.358)S(0.038)LNSLADSNAR	170.26	2.931e-05	9318200.0	1365.2	1328.2	1807.5	1278.2	1227.7	1092.8	1315.5	1534.2	1657.2	2003.9	True	False	1305.1874426443235	1547.662474460154	1428.1304509489898	1166.1421905335246	1389.1640690385693	1303.968133845371	1610.5343619154473	1480.241316407161	1580.1571337145717	1640.9742918119823	0.7953734858351259	0.9431363319843407	0.8702942258601943	0.7106401339449732	0.8465483438528697	0.7946304462853679	0.9814500872753327	0.9020502781750847	0.9629383845920855	1.0	10.680336921828223	-8.763413252465847	24.9999974883973	0.9534472244018967	0.8296585379208812	0.5389050564305672	0.06088071386332665	47.75368420135904	604805.4852663301	0.025635024541720043	0.018268293256795878	1.7241964538042611e-09	8.763413252465847	-0.12378868648101549	
DISENKR	ddPTM_K562_Methotrexat_30min_R1	1	DISENKR	7	1	E9PKE3;P11142-2;P11142;E9PN89;E9PNE6;A8K7Q2	E9PKE3	HSPA8	Heat shock cognate 71 kDa protein	0		88.029	0.016606	0.0	1394.9	953.63	1963.8	1766.3	1181.2	1114.9	1135.8	1303.1	1223.0	1876.1	False	True	1333.5818662060992	1111.20114856154	1551.6252169148686	1611.4512213576631	1336.5485039898656	1330.3386460690008	1390.532062534067	1257.2692343958893	1166.1429969423862	1536.3201102193027	0.8680364575945937	0.723287510962101	1.0099621860013153	1.0489032921190076	0.8699674599710079	0.8659254261008801	0.9051056829136832	0.8183641065639763	0.7590494905231205	1.0	10.585263134386288	-9.24954495085506	23.003967786737224	0.8415301001281746	0.8996773109043681	0.02279775225321412	0.10052333578808424	813.0447384102574	1572446.823224502	0.050046561754735465	0.028525086231378043	5.62930849252125e-10	9.24954495085506	0.05814721077619345	
DISSS(ph)LNSLADSNAR	ddPTM_K562_Methotrexat_30min_R1	1	DISSSLNSLADSNAR	15	0	O94776	O94776	MTA2	Metastasis-associated protein MTA2	1	DIS(0.097)S(0.037)S(0.863)LNS(0.003)LADSNAR	210.91	2.6243000000000004e-19	11776000.0	1510.2	1577.0	2062.5	1025.8	1239.2	1566.1	1286.5	1552.8	1527.8	2102.9	True	False	1443.8134162624208	1837.5724455832442	1629.6094357301754	935.8697066572443	1402.1765206097555	1868.726660336049	1575.0303737014233	1498.1871438645824	1456.7729114706267	1722.0444324823698	0.8384298273774086	1.0670877074491847	0.946322525128491	0.5434643200861925	0.8142510693458027	1.0851791191254183	0.9146281849597678	0.8700049287955413	0.8459554724558718	1.0	10.749906652539103														
DITDPLSLNT(ph)CTDEGHVVLASPLK	ddPTM_K562_Methotrexat_30min_R1	1	DITDPLSLNTCTDEGHVVLASPLK	24	0	Q7L2J0	Q7L2J0	MEPCE	7SK snRNA methylphosphate capping enzyme	1	DITDPLS(0.054)LNT(0.428)CT(0.428)DEGHVVLAS(0.09)PLK	65.416	0.010079000000000001	13522000.0	1129.6	846.21	1614.8	1012.1	753.66	1233.7	690.57	1185.6	1338.1	1678.3	True	False	1079.9441365448488	986.0318193893447	1275.8755475476783	923.3707643866221	852.779500099054	1472.0950647191016	845.4479014123527	1143.9017759955234	1275.8920230650915	1374.3436069404906	0.7857890349189878	0.7174565475546612	0.9283526631218388	0.671863105939128	0.620499484839514	1.0711259231570345	0.6151648664444661	0.8323258974093329	0.9283646510390745	1.0	10.424527029760675	-9.798683183502751	2.780957579807968	0.9919151675042431	0.7757810918346004	0.248847154140576	0.13269227624195254	0.3557971443253753	5.20480683197079	0.12010614860503274	0.03354993818781132	1.5897060113838517e-10	9.798683183502751	-0.2161340756696427	
DITDPLSLNTCT(ph)DEGHVVLASPLK	ddPTM_K562_Methotrexat_30min_R1	1	DITDPLSLNTCTDEGHVVLASPLK	24	0	Q7L2J0	Q7L2J0	MEPCE	7SK snRNA methylphosphate capping enzyme	1	DITDPLS(0.002)LNT(0.004)CT(0.865)DEGHVVLAS(0.129)PLK	61.985	0.016048	33496000.0	3766.9	2668.3	5409.2	3865.6	2942.5	2431.7	2509.4	3666.1	3822.6	5374.4	True	False	3601.3115863587027	3109.1912216548967	4273.882841091713	3526.7088497311797	3329.4903259314096	2901.591609692338	3072.196828423125	3537.1611850347385	3644.8881603532013	4401.044080999211	0.8182857340390608	0.7064667302648302	0.9711065743566406	0.8013345889801853	0.7565228306405611	0.659296193423621	0.6980609082483026	0.8037095561723306	0.8281871513374317	1.0	12.103630106546891	-12.436210362372957	3.5223085177884537	1.0022683690344614	0.7801590642806504	0.38269103507918045	0.08280186747462413	107288085.38178687	121430082.25505361	2329900.4726519743	0.02272521953471095	3.6626012359805893e-13	12.436210362372957	-0.22210930475381097	
DITDPLSLNTCTDEGHVVLAS(ph)PLK	ddPTM_K562_Methotrexat_30min_R1	2	DITDPLSLNTCTDEGHVVLASPLK	24	0	Q7L2J0	Q7L2J0	MEPCE	7SK snRNA methylphosphate capping enzyme	1	DITDPLS(0.003)LNT(0.065)CT(0.445)DEGHVVLAS(0.486)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK	138.37	1.6072e-16	37286000.0	5633.299999999999	3906.5	7651.2	5726.2	4315.700000000001	3899.6000000000004	3691.0	5454.700000000001	5621.4	7547.9	True	False	5385.666877122962	4551.982725853481	6045.31767983453	5224.192936499039	4883.290195283669	4653.1425098310865	4518.800706826238	5262.855109246608	5360.062340974593	6180.902169353594	0.87133993219087	0.7364592742501751	0.9780639644821877	0.8452152765662349	0.7900610722324973	0.7528257821168066	0.7310907992091419	0.8514703784410493	0.867197408098623	1.0	12.593601715066791	-10.156611876830915	1.9416051774651437	0.9993348405399008	0.8162561971937903	0.3771964561767599	0.07021528198897904	0.6665481098223986	4.884891039013696	0.0701434779614507	0.019595598660628058	6.972493581801738e-11	10.156611876830915	-0.18307864334611057	
DITDPLSLNTCTDEGHVVLAS(ph)PLKTGR	ddPTM_K562_Methotrexat_30min_R1	2	DITDPLSLNTCTDEGHVVLASPLKTGR	27	1	Q7L2J0	Q7L2J0	MEPCE	7SK snRNA methylphosphate capping enzyme	1	DITDPLSLNTCT(0.001)DEGHVVLAS(0.925)PLKT(0.073)GR;DITDPLS(0.001)LNT(0.001)CT(0.001)DEGHVVLAS(0.812)PLKT(0.186)GR	73.805	0.00017658	63372000.0	2921.0	2363.29	4898.1	3503.5	2551.8	2661.2	2139.58	2984.3999999999996	3109.2	4546.6	True	False	2792.596337506645	2753.7835034384443	3870.0557464969525	3196.3535945346625	2887.4064277695047	3175.439236630034	2619.435279412431	2879.4369604259778	2964.6539706404465	3723.1666825452176	0.7500594455248993	0.739634762082667	1.0394527230382602	0.8585040281757096	0.7755243517047232	0.8528866707786641	0.7035503652556706	0.7733838438996633	0.7962721584663947	1.0	11.862314490348815														
DKAIT(ph)PPLPESTVPFSNGVLK	ddPTM_K562_Methotrexat_30min_R1	1	DKAITPPLPESTVPFSNGVLK	21	1	Q92667-2;Q92667;I3NI36	Q92667-2	AKAP1	A-kinase anchor protein 1, mitochondrial	1	DKAIT(0.997)PPLPES(0.002)T(0.001)VPFSNGVLK	92.38	0.004021800000000001	0.0	1541.6	1309.0	2054.7	1479.0	822.47	712.38	783.88	1143.0	1148.0	1944.4	True	False	1473.8331098597191	1525.2900008043541	1623.4465491368683	1349.3383662956371	930.6392211958562	850.0373528447711	959.6850441796128	1102.8000421414322	1094.6297305722476	1592.2503183787712	0.9256290250645863	0.9579461113610603	1.0195925416990095	0.8474411031486137	0.5844804742406537	0.5338591194067268	0.6027224696408061	0.6926046924985406	0.6874733940620588	1.0	10.636851445100975	-7.574002796638708	4.372331854789365	0.6577416220215871	0.9635912577645779	0.5205872169375624	0.12179041755105952	0.14645086092882822	5.937542530756688	0.0354018443544091	0.047340092996868297	2.6668414913441376e-08	7.574002796638708	0.30584963574299073	
DKAITPPLPEST(ph)VPFSNGVLK	ddPTM_K562_Methotrexat_30min_R1	1	DKAITPPLPESTVPFSNGVLK	21	1	Q92667-2;Q92667;I3NI36	Q92667-2	AKAP1	A-kinase anchor protein 1, mitochondrial	1	DKAIT(0.266)PPLPES(0.34)T(0.394)VPFSNGVLK	73.44800000000001	0.030900999999999998	7667900.0	2193.2	1341.1	4108.0	2590.4	1732.1	1270.8	1309.2	1934.9	2061.0	3160.7	True	False	2096.78955406353	1562.6939801976455	3245.786939141603	2363.3036538554543	1959.9015101260125	1516.3641146510784	1602.8214265448137	1866.8484702882392	1965.184559851395	2588.266602190794	0.810113437421299	0.603760825440057	1.254038875436658	0.9130835486016303	0.7572255147391259	0.5858608666385363	0.6192644239925411	0.7212736387774263	0.7592666683517062	1.0	11.337770513216947	-7.852350686101319	4.7716168891002395	0.7088827185019233	0.8996494249394948	0.1381135934003329	0.18232695153920397	0.3702448435818359	14.544893633467195	0.05865699945097039	0.06763584033816684	1.404912620692655e-08	7.852350686101319	0.19076670643757154	
DKDNVAPR	ddPTM_K562_Methotrexat_30min_R1	1	DKDNVAPR	8	1	E9PQE6;E9PL83;P35318	E9PQE6	ADM	ADM;Adrenomedullin;Proadrenomedullin N-20 terminal peptide	0		83.206	0.013681	0.0	1886.9	2229.8	2142.3	1898.7	2076.4	2200.3	1756.2	2224.1	2329.4	1767.4	False	True	1803.954135310265	2598.2365498804797	1692.6605062616975	1732.2439189219244	2349.482994992006	2625.476834644921	2150.072555223038	2145.8771423681196	2221.106702434664	1447.3067335438393	1.246421434724585	1.7952217658232696	1.1695243772666566	1.1968740825798516	1.623348348030635	1.8140431283811163	1.4855679901097563	1.4826692176811602	1.534648220005249	1.0	10.499154995105616	-12.334805800222458	5.908325226738832	0.9999426249274834	1.488594253049368	0.3105525943469437	0.21582752784777584	0.00016766388031816038	1.8876284475763557e-05	0.21478020403906287	0.05208576569211331	4.625878266305173e-13	12.334805800222458	0.4886516281218847	
DKPTYDEIFYTLS(ph)PVNGK	ddPTM_K562_Methotrexat_30min_R1	1	DKPTYDEIFYTLSPVNGK	18	1	A0A024R571;Q9H4M9	A0A024R571	EHD1	EH domain-containing protein 1	1	DKPTYDEIFY(0.004)T(0.002)LS(0.994)PVNGK	96.848	0.005589800000000001	0.0	4220.1	2344.1	5268.9	3730.2	1833.7	2214.3	2137.3	3097.3	3038.3	5281.4	True	False	4034.589457005061	2731.42268211267	4163.029893778772	3403.179157509117	2074.863690963612	2642.1821365060428	2616.643931373534	2988.366203433649	2897.0500961652106	4324.8872821876375	0.9328773662198806	0.6315592763220056	0.962575351021173	0.7868827406266419	0.47974977278808834	0.6109250863919765	0.6050201451839848	0.6909697313364563	0.6698556302488904	1.0	12.078446817515955	-7.542698285597594	24.909483985112875	0.6519594381825455	0.8301711484977194	0.1945092329821262	0.14968089698372125	316.0281129797521	397186.34993467905	0.04173742525185037	0.0538893915789812	2.8661684718064962e-08	7.542698285597594	0.1782117103151739	
DKS(ph)PVREPIDNLTPEER	ddPTM_K562_Methotrexat_30min_R1	2	DKSPVREPIDNLTPEER	17	2	G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23;H0Y4X3;Q14498-3	G3XAC6	RBM39	RNA-binding protein 39	1	DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER	62.438	0.031604	523975000.0	3084.3	2255.0	4930.6	3681.2999999999997	2590.4	2225.35	2282.0	3223.4	2995.8	4626.2	True	False	2948.717865036543	2627.6004215537196	3895.734440635733	3358.566144586971	2931.0830043475694	2655.36739261786	2793.7965898069533	3110.0311949594893	2856.5259118887993	3788.3503512054485	0.7783646156428654	0.6936001631205045	1.0283458707550939	0.8865510930155336	0.7737095919375309	0.7009297310036082	0.7374704900031146	0.820946033666047	0.7540289696225841	1.0	11.887354043814119														
DKSPVREPIDNLT(ph)PEERDAR	ddPTM_K562_Methotrexat_30min_R1	1	DKSPVREPIDNLTPEERDAR	20	3	G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23;H0Y4X3;Q14498-3	G3XAC6	RBM39	RNA-binding protein 39	1	DKS(0.003)PVREPIDNLT(0.997)PEERDAR	52.644	0.03286	51289000.0	2799.3	1876.8	4393.1	4760.1	1521.3	2097.7	1976.1	2214.1	2594.7	4051.8	True	False	2676.246123787178	2186.9092998545534	3471.0483452636263	4342.789423532024	1721.3776152385574	2503.0508367198354	2419.290727921789	2136.228848036172	2474.0729633412984	3317.9797572552493	0.8065890450160744	0.659108692593002	1.0461330686764048	1.3088655571318293	0.518802928641898	0.7543900264148833	0.7291457166462981	0.6438342016297702	0.7456564368517846	1.0	11.696089369208861	-7.796301085435853	24.999994301430288	0.715143049841782	0.9405252516448218	0.2395666690739079	0.19271944947897782	273.8002990563116	196345.8813676884	0.06213923705725987	0.07046216574693394	1.59844947959318e-08	7.796301085435853	0.2253822018030398	
DKT(ph)SIRWDT(ph)AMTVR	ddPTM_K562_Methotrexat_30min_R1	1	DKTSIRWDTAMTVR	14	2	A0A0A0MRA3;A0A0A0MTS7;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42;Q8WZ42-8;Q8WZ42-13;Q8WZ42-12	A0A0A0MRA3	TTN	Titin	2	DKT(0.979)S(0.021)IRWDT(0.94)AMT(0.06)VR	82.029	0.032582	44176000.0	1584.8	1329.0	1668.2	1836.9	1371.0	1586.8	1317.8	1704.1	1550.2	1430.6	True	False	1515.1340895859396	1548.5946608624795	1318.0676173018558	1675.8618289712342	1551.310530790812	1893.4266423735664	1613.350195463455	1644.1658371069245	1478.131540359842	1171.5044772025667	1.2933233453822774	1.3218853969387856	1.1251067690746406	1.430521062090195	1.324203672268657	1.6162350884862824	1.3771609301195082	1.4034652612109728	1.2617378500246703	1.0	10.194146752500009	-10.106325059575013	3.8480235677004133	1.000088062835879	1.3617429369208525	0.4682566409903184	0.11633079906262767	0.4621708856603769	14.206810035856348	0.11821097139533009	0.03109979955815141	7.828434828286496e-11	10.106325059575013	0.36165487408497343	
DKWLAPDGLIFPDR	ddPTM_K562_Methotrexat_30min_R1	1	DKWLAPDGLIFPDR	14	1	E9PNR9;E9PQ98;E9PIX6;H0YDE4;E9PKG1;Q99873-2;Q99873-3;Q99873	E9PNR9	PRMT1	Protein arginine N-methyltransferase 1	0		80.387	0.014393000000000001	0.0	2019.6	1769.3	2214.9	1840.7	1641.7	1412.8	1571.9	2119.6	2281.4	2859.2	False	True	1930.8208022007582	2061.646752042127	1750.0227583993997	1679.328688871114	1857.612325601223	1685.8036049567536	1924.4385887456401	2045.0524665992823	2175.338211957775	2341.3711737855297	0.8246538711241612	0.8805296550691089	0.7474349979161836	0.7172415495984666	0.7933865191471691	0.7200069872864907	0.8219280267443487	0.8734422331222439	0.9290872956468015	1.0	11.193137945353884	-9.649052397708267	1.3978867945301068	0.9933323307290649	0.7813733829187605	0.7094955807072292	0.047054627426194796	0.23859978181543973	0.87536919290806	0.047710038743738026	0.015246180022665978	2.2436112153511964e-10	9.649052397708267	-0.21195894781030444	
DLAGAPPGEVVGCFT(ph)PQSR	ddPTM_K562_Methotrexat_30min_R1	1	DLAGAPPGEVVGCFTPQSR	19	0	Q9Y446;Q9Y446-2	Q9Y446	PKP3	Plakophilin-3	1	DLAGAPPGEVVGCFT(0.982)PQS(0.018)R	124.99	8.720700000000001e-05	16800000.0	3156.3	3156.6	3140.1	4213.0	2898.5	2675.5	2742.8	3482.6	3616.7	4273.2	True	False	3017.5528312469078	3678.174496974042	2481.0359220054893	3843.652831104472	3279.70355470253	3192.5025092453257	3357.942719773234	3360.114984043531	3448.5604064117147	3499.2820718453827	0.8623348359155196	1.0511226078537643	0.7090128406530798	1.0984118319668588	0.9372504094741194	0.9123307134716712	0.9596090428921575	0.9602298171611926	0.985505122367309	1.0	11.772843247396612	-3.0000212665882184	0.10195632365317074	1.0324726315777744	0.6582642562091738	0.07748751848408775	0.09771032084124187	382.31813030216637	2.760420348285784	1.1238703206794727	20.031293473914648	0.0009999510330699086	3.0000212665882184	-0.3742083753686005	
DLAVPAALT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	DLAVPAALTPR	11	0	Q8TEM1	Q8TEM1	NUP210	Nuclear pore membrane glycoprotein 210	1	DLAVPAALT(1)PR;DLAVPAALT(1)PR;DLAVPAALT(1)PR;DLAVPAALT(1)PR	137.09	0.00020585	518547000.0	22752.2	22856.6	36059.299999999996	18421.3	23176.2	21683.300000000003	20100.600000000002	15434.2	14556.8	16257.699999999999	True	False	21752.040530715054	26633.264654228245	28490.94570949095	16806.333229913336	26224.27653079066	25873.29084609201	24608.671223958667	14891.370437812164	13880.057545291018	13313.272989665984	1.6338612261312002	2.0005046598910345	2.140040674566364	1.2623742668657612	1.9697843311067416	1.9434207400520782	1.8484313544130273	1.1185356485494686	1.0425728936877492	1.0	13.700577672473454	-9.285081511321515	5.055213435059201	1.0465856766966215	1.8367947437874712	0.7069651713940777	0.2287675407996828	0.10672192195276349	7.942491687227993	0.12695266228395635	0.062006354848555885	5.187026761709033e-10	9.285081511321515	0.7902090670908497	
DLDAPDDVDFF	ddPTM_K562_Methotrexat_30min_R1	1	DLDAPDDVDFF	11	0	H7C3A1;Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5	H7C3A1	SRRT	Serrate RNA effector molecule homolog	0		83.206	0.01908	0.0	996.98	1025.8	1231.1	1136.6	847.87	737.87	1024.4	1120.8	1099.1	1220.3	False	True	953.1539529501445	1195.2960143812882	972.7089339769293	1036.956042685342	959.3797664052556	880.4529345904863	1254.14777677399	1081.3808287245124	1048.0030808989177	999.2918450512307	0.9538294119685117	1.1961430690150474	0.9733982507653322	1.0376908886234135	0.960059637388586	0.881076873538729	1.2550365371086298	1.0821471565887475	1.0487457553956019	1.0	9.964762271114616	-8.752166445296384	24.999946821921625	1.1033279757274714	1.0079039542227235	0.18408444911445176	0.09794395329384499	350.62293008686356	945285.2623915581	0.03813190311364002	0.029113149216686278	1.7694306861512723e-09	8.752166445296384	-0.09542402150474794	
DLDLLASVPS(ph)PSSSGSR	ddPTM_K562_Methotrexat_30min_R1	3	DLDLLASVPSPSSSGSR	17	0	A0A087WV97;Q8WU79-3;Q8WU79-2;Q8WU79	A0A087WV97	SMAP2	Stromal membrane-associated protein 2	1	DLDLLAS(0.009)VPS(0.989)PS(0.002)SSGSR;DLDLLASVPS(0.865)PS(0.127)S(0.007)S(0.002)GSR;DLDLLASVPS(0.887)PS(0.112)S(0.001)SGSR	178.51	4.8058e-08	297575000.0	10083.2	8280.6	11151.8	8431.3	8617.7	7776.9	7220.6	10826.5	10764.699999999999	10349.0	True	False	9639.95460128278	9648.828403865948	8811.189578364003	7692.141019437728	9751.078600434706	9279.675860269092	8840.003355109598	10445.725858481383	10264.251446595006	8474.695816139627	1.137498597049817	1.138545690984005	1.0397057038417286	0.9076598365676366	1.1506110439815755	1.0949863053015332	1.0431056815365882	1.2325782641765182	1.2111645856417952	1.0	13.048945870914308	-9.246811474976816	24.867191474898405	1.1664035744653687	1.071840274067335	0.12008494382036405	0.08853672536798486	1219.3904235726507	2072947.4716169657	0.04250163379900859	0.024395867677651305	5.66485143988687e-10	9.246811474976816	-0.09456330039803373	
DLDLLASVPS(ph)PSSSGSRK	ddPTM_K562_Methotrexat_30min_R1	2	DLDLLASVPSPSSSGSRK	18	1	A0A087WV97;Q8WU79-3;Q8WU79-2;Q8WU79	A0A087WV97	SMAP2	Stromal membrane-associated protein 2	1	DLDLLASVPS(0.889)PS(0.064)S(0.008)S(0.023)GS(0.017)RK;DLDLLASVPS(0.964)PS(0.028)S(0.005)S(0.001)GS(0.001)RK	103.4	0.00057767	21501000.0	4708.299999999999	3140.1000000000004	6599.3	4570.9	3401.1	3423.0	3165.6	4784.5	4866.299999999999	5924.0	True	False	4501.328769559234	3658.94815242609	5214.197114770495	4170.17629378007	3848.4042642396994	4084.4463050445715	3875.566382424581	4616.226423119586	4640.066775160042	4851.106195266321	0.9278973884248509	0.7542502689379318	1.0748470358901803	0.8596340970332297	0.79330447723345	0.8419618414105526	0.7989036369078736	0.9515822241995178	0.9564966398154281	1.0	12.244098046488602	-9.423204171668864	6.483185474010301	0.9705967995885368	0.8646071116173004	0.24733316596670718	0.08450554807287292	0.3589894356582097	19.57178295404994	0.04767564185973437	0.022420183168011826	3.773947274078751e-10	9.423204171668864	-0.10598968797123642	
DLEAEHVEVEDTTLNR	ddPTM_K562_Methotrexat_30min_R1	2	DLEAEHVEVEDTTLNR	16	0	H3BV85;H3BTW0;A0A0B4J295;A0A087WZT3;H3BVE0;Q9H3K6-2;Q9H3K6	H3BV85	BOLA2B;BOLA2	BolA-like protein 2	0	;	139.21	3.6363e-06	16914800.0	4545.0	4287.0	5641.1	5350.4	4253.2	4179.3	4683.1	4660.4	4713.3	6064.9	False	True	4345.207242029338	4995.35388345933	4457.110200192725	4881.338739031895	4812.570349788093	4986.890576299375	5733.404386382538	4496.491090460134	4494.179711764962	4966.487839917408	0.8749054426561524	1.0058121643447742	0.897437050861046	0.9828552684250751	0.969008785465611	1.004108081412781	1.1544182873662052	0.9053663746682827	0.9049009796507828	1.0	12.278010263789085	-7.418576469465184	6.330941919850118	0.992350237636912	0.9341466325883779	0.13314913903589043	0.07226627267107452	0.5654606277702448	29.273618509628275	0.021385449250055782	0.03180603355093737	3.8143762580147005e-08	7.418576469465184	-0.05820360504853406	
DLELALS(ph)PIHNSSALPTTGR	ddPTM_K562_Methotrexat_30min_R1	4	DLELALSPIHNSSALPTTGR	20	0	A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5	A0A087WUU7	MASTL	Serine/threonine-protein kinase greatwall	1	DLELALS(0.998)PIHNS(0.001)SALPTTGR;DLELALS(1)PIHNSSALPTTGR;DLELALS(1)PIHNSSALPTTGR;DLELALS(1)PIHNSSALPTTGR	130.81	1.1974e-07	105189800.0	6713.4	5453.1	7647.799999999999	7254.799999999999	6213.25	5750.8	5573.860000000001	6506.9	6643.5599999999995	7535.4	True	False	6418.2869743981855	6354.1320881483725	6042.631293370777	6618.78294780364	7030.4012804055465	6862.060710210429	6823.93999126266	6278.048638853973	6334.702345679929	6170.6660404810655	1.0401287206749914	1.0297319683910497	0.9792510652382823	1.0726205087721195	1.139326165811666	1.112045387838792	1.1058676561810281	1.0174021082438187	1.0265832414398617	1.0	12.591210501984825	-5.080612249551585	13.703974301696249	1.0562532035629932	0.7720612826765109	0.0	0.050189848388338267	0.0	0.0	0.012679919615675446	0.0	8.305920127024867e-06	5.080612249551585	-0.2841919208864824	
DLEWVER	ddPTM_K562_Methotrexat_30min_R1	1	DLEWVER	7	0	H7C2Q8;Q99848	H7C2Q8	EBNA1BP2	Probable rRNA-processing protein EBP2	0		121.99	0.026993	15769000.0	3008.0	2627.2	4184.8	2971.4	2652.6	2703.3	2252.3	2999.0	3147.7	3227.5	False	True	2875.7719216775026	3061.3001452354442	3306.467668675702	2710.9019753961147	3001.463394584761	3225.6744657981235	2757.435608773971	2893.5234701506183	3001.3641140437826	2642.9684748855593	1.0880840800804572	1.1582809913644538	1.2510431736492325	1.0257034849851914	1.1356410124092473	1.22047406030365	1.0433100640344823	1.0948005992678018	1.1356034483815558	1.0	11.367943501394308	-12.813328965184057	0.22734744490386716	0.8613960230019119	1.15453767486664	0.25989371068637357	0.06654155513166392	39.50544455564182	1.4426978732906504	3.097299961102199	0.13568807325044835	1.5369899749571155e-13	12.813328965184057	0.2931416518647282	
DLFDLNS(ph)SEEDDTEGFSER	ddPTM_K562_Methotrexat_30min_R1	4	DLFDLNSSEEDDTEGFSER	19	0	Q9Y3T9	Q9Y3T9	NOC2L	Nucleolar complex protein 2 homolog	1	DLFDLNS(0.5)S(0.5)EEDDTEGFSER;DLFDLNS(0.5)S(0.5)EEDDTEGFSER;DLFDLNS(0.9)S(0.1)EEDDTEGFSER;DLFDLNS(0.932)S(0.068)EEDDTEGFSER	305.85	1.1247999999999996e-226	69334500.0	13520.3	11174.69	16321.6	13980.299999999997	12128.6	11807.2	10467.300000000001	13951.499999999998	13702.9	15053.499999999998	True	False	12925.963800750103	13021.117585247059	12895.919207861152	12754.66880481601	13723.723489241016	14088.774295332238	12814.858476987873	13460.817837214512	13065.855169911547	12327.165278602562	1.048575524754822	1.056294556855586	1.046138257774951	1.0346797918703585	1.1132911078155652	1.1429046319178886	1.0395624774522854	1.0919637672563487	1.0599237435869542	1.0	13.589553459202008	-7.737774664292378	24.99957371268441	1.0808684193416196	1.047106939732492	0.10689357638980945	0.037348810205345036	446.4358073429435	471615.629816966	0.01090190441377645	0.014065350017266469	1.8290489805387498e-08	7.737774664292378	-0.033761479609127676	
DLFDYS(ph)PPLHK	ddPTM_K562_Methotrexat_30min_R1	1	DLFDYSPPLHK	11	0	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	DLFDY(0.004)S(0.996)PPLHK	90.61399999999999	0.016443	10921000.0	1342.3	944.01	1671.2	1169.9	1011.3	820.68	965.88	1039.9	1240.4	1479.7	True	False	1283.294099224638	1099.9916070735817	1320.4379582992815	1067.336683386928	1144.3036759947104	979.2647950990292	1182.5031771090012	1003.3261275790685	1182.7340747402577	1211.7119914138386	1.0590751831442031	0.9077995553960803	1.0897292158993823	0.8808501450427572	0.9443693584805779	0.8081662986238277	0.9758945900413544	0.8280236018861022	0.9760851449198178	1.0	10.242831113889093	-7.282999800714708	24.832154411877504	0.9081925495974515	1.0077611571415765	0.2776721459543079	0.07446776461695861	873.0608747108425	1005542.9120870589	0.019318684346979857	0.028683079656539497	5.21194950266452e-08	7.282999800714708	0.099568607544125	
DLFSLDSEDPS(ph)PASPPLR	ddPTM_K562_Methotrexat_30min_R1	1	DLFSLDSEDPSPASPPLR	18	0	H3BTX0;Q9BTK6	H3BTX0	PAGR1	PAXIP1-associated glutamate-rich protein 1	1	DLFSLDSEDPS(0.686)PAS(0.314)PPLR	270.78	7.358299999999998e-117	159420000.0	2836.9	2479.1	3519.1	2934.9	2734.8	2489.5	2594.7	3145.0	3363.3	3841.1	True	False	2712.1932728081465	2888.729137505022	2780.4890013469353	2677.6018737262093	3094.4741353805334	2970.560641661834	3176.62752479058	3034.3885673970312	3206.940917102476	3145.439568979993	0.8622620823987599	0.9183864684584555	0.8839747006325719	0.8512647644330694	0.9837970393384519	0.9444023884474534	1.0099152932767044	0.9646946001830283	1.0195525448109075	1.0	11.61904592964389	-7.772471793082551	24.996741790092837	0.9843049161974928	0.8821446601692831	0.8046292752360913	0.026052567144200497	92.74211644455659	210130.17494875312	0.007918810465095037	0.009063404014802573	1.6886055288747077e-08	7.772471793082551	-0.10216025602820977	
DLFSLDSEDPSPAS(ph)PPLR	ddPTM_K562_Methotrexat_30min_R1	6	DLFSLDSEDPSPASPPLR	18	0	H3BTX0;Q9BTK6	H3BTX0	PAGR1	PAXIP1-associated glutamate-rich protein 1	1	DLFSLDSEDPSPAS(1)PPLR;DLFSLDSEDPSPAS(1)PPLR;DLFSLDSEDPSPAS(1)PPLR;DLFSLDSEDPS(0.001)PAS(0.999)PPLR;DLFSLDSEDPS(0.046)PAS(0.954)PPLR;DLFSLDSEDPSPAS(1)PPLR	289.5	5.484299999999998e-177	141775300.0	13410.4	10817.400000000001	14921.2	13688.0	11896.7	10929.899999999998	10900.560000000001	14048.3	13678.5	15424.7	True	False	12820.894873159566	12604.791485638663	11789.44403026282	12487.994291990992	13461.324574514267	13041.948486563437	13345.288060905388	13554.213326347764	13042.5895205858	12631.137361601024	1.0150229948520242	0.9979142119028447	0.9333636150694574	0.9886674441491555	1.0657254520433792	1.0325236843842178	1.0565389068980755	1.0730794019826682	1.0325744346851615	1.0	13.624696930952348	-7.69608641678138	6.65256502992499	1.0470966508183415	0.9804342028936538	0.529405296087224	0.027402488581924365	0.1558386362886906	12.465194863370932	0.008152158446006487	0.010494458722594609	2.0133235948615095e-08	7.69608641678138	-0.06666244792468767	
DLGSHDNLS(ph)PPFVNSR	ddPTM_K562_Methotrexat_30min_R1	2	DLGSHDNLSPPFVNSR	16	0	E9PH57;P15884-5;A0A1B0GVR6;P15884-15;H3BTP3;H3BPJ7;A0A1B0GVB8;P15884-10;P15884-4;P15884-14;P15884-13;P15884-12;P15884;P15884-3;H3BT24;G0LNT4;H3BP59;H3BTC3;A0A0D9SG61;A0A075B723;A0A0D9SGE5;A0A0D9SG55;H3BMC8;A0A0D9SEX8;H3BTZ0;H3BUQ3;A0A1B0GTP2;H3BNI2	E9PH57	TCF4	Transcription factor 4	1	DLGSHDNLS(1)PPFVNSR;DLGSHDNLS(0.997)PPFVNS(0.003)R	103.41	0.0009997	60218000.0	3749.4	3211.6000000000004	4343.8	4118.3	3501.5	3627.7	3505.1000000000004	3755.9	3917.6000000000004	4104.4	True	False	3584.5808654047964	3742.262312133889	3432.095741539264	3757.255033073241	3962.008624043785	4328.701682971133	4291.20789961979	3623.802868135615	3735.4716310887106	3361.0533875508268	1.066505185154721	1.1134194791415812	1.0211369311334282	1.1178801999962051	1.1787996699840788	1.2879003050068847	1.276744938213183	1.0781747417514995	1.1113990765290163	1.0	11.714697743506486	-7.560883057461425	4.316293728222575	1.1714388924726296	1.070911812227916	0.1656041268225793	0.08414363640127571	0.329878820703361	13.742853269619326	0.026274865511731374	0.035488085739633024	2.748634178591271e-08	7.560883057461425	-0.10052708024471357	
DLHDANTDLIGR	ddPTM_K562_Methotrexat_30min_R1	2	DLHDANTDLIGR	12	0	Q5T8R3;Q5T8R5;P53985-2;P53985	Q5T8R3	SLC16A1	Monocarboxylate transporter 1	0	;	137.95	8.4388e-06	20866000.0	4477.700000000001	4230.7	5397.8	4664.5	4488.6	3987.6000000000004	4139.4	4966.0	5138.9	5170.6	False	True	4280.865669446592	4929.751265395707	4264.875545301497	4255.570527103449	5078.929575862612	4758.147264386717	5067.765821142377	4791.342965244404	4899.993660660039	4234.154235861591	1.0110320576396046	1.1642824022900933	1.0072555952685214	1.0050579856209467	1.199514541262128	1.123753883145568	1.1968779451207587	1.1315938670026822	1.1572544096667652	1.0	12.047858107446384	-7.7583353264910695	24.999987354654426	1.1439604812123654	1.0524587248127408	0.2810885792232338	0.06771999491364401	101.00194657805756	813463.0087261068	0.019511007918872947	0.024111443725113757	1.7444746928620517e-08	7.7583353264910695	-0.09150175639962455	
DLHILPPPLIPT(ph)PPPDDPR	ddPTM_K562_Methotrexat_30min_R1	2	DLHILPPPLIPTPPPDDPR	19	0	E9PK26;E9PMW6;Q9NRS6-2;Q9NRS6	E9PK26	SNX15	Sorting nexin-15	1	DLHILPPPLIPT(1)PPPDDPR;DLHILPPPLIPT(1)PPPDDPR	92.565	0.0044726	23017400.0	4090.7	3822.1000000000004	4734.8	4097.5	3631.1000000000004	3853.3	3721.3	3958.0	4425.2	4502.3	True	False	3910.877726065877	4453.637060408191	3741.0301848704166	3738.2785367791585	4108.6532956633955	4597.895690104655	4555.896253132613	3818.794896584242	4219.4734178818035	3686.889841820995	1.0607525295993796	1.2079658605174086	1.014684556732696	1.013938223587603	1.114395458485976	1.2470933191303877	1.2357017563840222	1.0357767821720698	1.1444533465631725	1.0	11.848188596392776	-5.966205604919646	18.10377080114819	1.1168334708168632	0.8313441677239941	0.027120081613448144	0.09022931370860825	5828.618416817358	39952.81833633492	0.02272776516532851	56452.61153296913	1.0809220969551247e-06	5.966205604919646	-0.28548930309286913	
DLHQPSLS(ph)PASPHSQGFER	ddPTM_K562_Methotrexat_30min_R1	2	DLHQPSLSPASPHSQGFER	19	0	F8VQX7;Q9BZF1-3;Q9BZF1-2;Q9BZF1;F8VVD3;F8VVE7;F8VZ43	F8VQX7	OSBPL8	Oxysterol-binding protein;Oxysterol-binding protein-related protein 8	1	DLHQPSLS(1)PASPHSQGFER;DLHQPS(0.17)LS(0.83)PASPHSQGFER	178.73	5.3476e-12	117228000.0	4289.200000000001	3710.5	4861.799999999999	4174.4	4231.5	4072.8	3939.8	4633.1	4641.3	4804.6	True	False	4100.651903743064	4323.597057283848	3841.3746204281038	3808.436833174109	4788.016419432033	4859.8109585701195	4823.4004401934435	4470.15124693392	4425.526976049626	3934.440382474104	1.0422452763573054	1.0989102990461452	0.9763458705688972	0.9679742130898016	1.2169497956456956	1.2351975087023972	1.225943201904697	1.1361593549227818	1.1248173935391317	1.0	11.941942732378541	-7.763685730588637	24.998465845144462	1.1707250977048416	1.0236916481763614	0.4449460550615991	0.07289718145075666	52.16006841249274	580462.4088587571	0.022561885105885283	0.026838803050873626	1.7231150252243383e-08	7.763685730588637	-0.1470334495284802	
DLHQPSLSPAS(ph)PHSQGFER	ddPTM_K562_Methotrexat_30min_R1	1	DLHQPSLSPASPHSQGFER	19	0	F8VQX7;Q9BZF1-3;Q9BZF1-2;Q9BZF1;F8VVD3;F8VVE7;F8VZ43	F8VQX7	OSBPL8	Oxysterol-binding protein;Oxysterol-binding protein-related protein 8	1	DLHQPSLS(0.001)PAS(0.973)PHS(0.025)QGFER	132.26	2.8041e-07	13297000.0	911.28	693.71	1168.2	1022.4	1019.7	912.25	902.15	898.99	770.34	1226.5	True	False	871.2212223358621	808.3337864461333	923.0107843975713	932.7677793784035	1153.8084232293145	1088.5294016292464	1104.4801023200453	867.3720121476172	734.5270615409629	1004.3689649720023	0.8674314447381876	0.8048175666884194	0.9189957242688209	0.9287102767103175	1.1487894025692817	1.083794342111706	1.0996756578901594	0.8635989784608646	0.7313318980952767	1.0	9.972073639757356	-4.261181457702379	18.15359611908859	0.9497171618401447	0.4078349598648865	0.0	0.12918310820009374	0.0	0.0	0.032623890211178605	0.0	5.4804793070327094e-05	4.261181457702379	-0.5418822019752582	
DLIHDQDEDEEEEEGQRFYAGGSER	ddPTM_K562_Methotrexat_30min_R1	2	DLIHDQDEDEEEEEGQRFYAGGSER	25	1	F2Z2K0;Q9UNZ2-4;Q9UNZ2	F2Z2K0	NSFL1C	NSFL1 cofactor p47	0	;	90.22	0.00029566	27132000.0	1534.6	1551.8000000000002	1704.68	2340.1	1441.34	1432.42	1658.79	1579.5300000000002	1470.7	1819.53	False	True	1467.1408214781563	1808.2085739100046	1346.8909638305524	2134.9470662396343	1630.901473705345	1709.21489227927	2030.815883087589	1523.977034613874	1402.3274780074958	1489.9954853938114	0.9846612529100285	1.2135664783119047	0.9039564059313671	1.4328547214861929	1.0945680639255708	1.1471275645023302	1.3629678096312063	1.0228064779747175	0.9411622328753938	1.0	10.54109224406776	-9.503429234309586	23.922728928804034	0.974382096808718	1.1641769568776068	0.22987381359488201	0.148654434292939	586.6281140264408	721554.9751627254	0.08005402274319001	0.03747306609849432	3.1374063101189884e-10	9.503429234309586	0.1897948600688888	
DLIRAT(ph)SGAAT(ph)PVIAST(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	DLIRATSGAATPVIASTK	18	1	F5H586;H0Y6W5;B1APH0;Q6ZN30-2;Q6ZN30	F5H586	BNC2	Zinc finger protein basonuclin-2	3	DLIRAT(0.818)S(0.265)GAAT(0.476)PVIAS(0.473)T(0.968)K	65.47	0.027658	21018000.0	2162.2	2354.9	3466.5	2581.7	1822.5	2128.2	1816.8	1626.8	1317.8	1576.0	True	False	2067.152276945178	2744.0071985440572	2738.929022525407	2355.3663693478343	2062.190694650806	2539.444530060138	2224.2636478357904	1569.5845219209828	1256.5357656342403	1290.5711282477585	1.6017344815018477	2.126196021655673	2.1222611931851607	1.8250573856752674	1.597889995765437	1.9676904856131463	1.7234723442602735	1.2161937359098123	0.973627673927799	1.0	10.33379394065613	-9.304990597730981	2.1980583228558177	0.986517231973411	1.8841713385926917	0.8230737924611865	0.17075617587570313	0.13579626848281312	1.2345291536224132	0.12873250935378963	0.051646418496573344	4.954609171819362e-10	9.304990597730981	0.8976541066192807	
DLLHNEDRHDDYFQER	ddPTM_K562_Methotrexat_30min_R1	4	DLLHNEDRHDDYFQER	16	1	Q8N684-2;Q8N684;Q8N684-3	Q8N684-2	CPSF7	Cleavage and polyadenylation specificity factor subunit 7	0	;;;	103.3	0.004412	181974000.0	12222.0	11646.5	16407.1	14569.8	11646.0	11764.0	11319.3	13025.5	12671.900000000001	14633.0	False	True	11684.73551420959	13570.886168348283	12963.473926287777	13292.48825507381	13177.65313026243	14037.226506732202	13857.941165206768	12567.385782076317	12082.786134876716	11982.821903330881	0.9751238571743746	1.132528404229722	1.0818381538896362	1.10929531977596	1.0997120074528872	1.171445809674452	1.1564839465196972	1.0487834905217897	1.008342294690873	1.0	13.548680076201604	-9.506204774719343	4.60297453684815	1.0090780387886829	1.1067966264240532	0.38898977160818615	0.050478531698712546	0.19928619895540306	10.944518543842936	0.03326219879282186	0.013433032601492926	3.117419339318694e-10	9.506204774719343	0.09771858763537034	
DLLPSGSRDEPPPASQSTSQDCSQALKQS(ph)P	ddPTM_K562_Methotrexat_30min_R1	1	DLLPSGSRDEPPPASQSTSQDCSQALKQSP	30	2	Q5JRA6-4;Q5JRA6-2;Q5JRA6	Q5JRA6-4	MIA3	Melanoma inhibitory activity protein 3	1	DLLPSGSRDEPPPASQS(0.002)T(0.026)S(0.023)QDCS(0.138)QALKQS(0.811)P	76.979	0.00018457	22912000.0	236.48	269.09	351.78	368.33	201.38	263.27	234.16	335.4	391.79	513.05	True	False	226.08462235315687	313.5525487520576	277.9461853581384	336.03908076921687	227.86499977436446	314.1432014984177	286.6763406964052	323.6037918934701	373.57576841541913	420.13167344385334	0.5381280123441371	0.746319710156204	0.6615692244285964	0.7998422923334423	0.5423656776613308	0.747725585465529	0.6823487940018804	0.7702437410654227	0.889187347750262	1.0	8.714697743506486	-9.797106017224134	1.3118477745916044	1.0009534434342997	0.674604636722774	0.6614175539176139	0.07886316618285369	0.23856386429070153	0.8560602123094199	0.06988411287724136	0.021976807239635555	1.595489618851975e-10	9.797106017224134	-0.32634880671152566	
DLLSDLQDIS(ph)DSER	ddPTM_K562_Methotrexat_30min_R1	5	DLLSDLQDISDSER	14	0	P21127;P21127-9;P21127-8;P21127-2;P21127-6;A0A0D9SER5;A0A0D9SEI3;P21127-3;A0A0D9SEN2;Q5QPR4;Q9UQ88;Q9UQ88-2;Q9UQ88-4;Q9UQ88-9;Q9UQ88-3;Q5QPR3;E7ESP2;J3KS35;P21127-10;P21127-5	P21127	CDK11B;CDK11A	Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A	1	DLLSDLQDIS(0.795)DS(0.205)ER;DLLSDLQDIS(0.979)DS(0.021)ER;DLLSDLQDIS(0.995)DS(0.005)ER;DLLSDLQDIS(0.992)DS(0.008)ER;DLLSDLQDIS(0.946)DS(0.054)ER	293.42	9.679799999999997e-167	174589000.0	13364.500000000002	11293.4	15832.4	11910.0	10973.1	10699.3	9894.5	14715.8	14195.199999999999	14923.0	True	False	12777.012582200467	13159.442395022064	12509.39560254759	10865.86879146791	12416.254985718939	12766.788300193793	12113.593495988127	14198.236973005149	13535.268250365132	12220.300093173413	1.045556368074631	1.0768510015865553	1.0236569893676895	0.8891654630918495	1.0160351948030304	1.044719704332438	0.9912680870050895	1.1618566536624304	1.1076052263173386	1.0	13.576992093316335	-9.24457090037375	24.958495041504733	1.1010482103103292	1.0120071812943598	0.25277931963724354	0.060019934181593244	969.7145456789025	1434786.9989687938	0.02937133920182287	0.016898071576407228	5.694152571393086e-10	9.24457090037375	-0.08904102901596933	
DLLSDLQDISDS(ph)ER	ddPTM_K562_Methotrexat_30min_R1	1	DLLSDLQDISDSER	14	0	P21127;P21127-9;P21127-8;P21127-2;P21127-6;A0A0D9SER5;A0A0D9SEI3;P21127-3;A0A0D9SEN2;Q5QPR4;Q9UQ88;Q9UQ88-2;Q9UQ88-4;Q9UQ88-9;Q9UQ88-3;Q5QPR3;E7ESP2;J3KS35;P21127-10;P21127-5	P21127	CDK11B;CDK11A	Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A	1	DLLSDLQDIS(0.397)DS(0.603)ER	92.26899999999999	0.012156	19766000.0	2329.2	1611.5	3072.9	2396.0	2152.9	2083.0	2052.9	2313.1	2601.4	2783.1	True	False	2226.811156905333	1877.772984183511	2427.940283663154	2185.9464000299836	2436.0440858785846	2485.5102697656544	2513.3150829161677	2231.7469619224403	2480.4614818036976	2279.053621209606	0.9770771236718225	0.8239266363495583	1.0653282841035248	0.9591465420939917	1.0688840592463358	1.0905887630877555	1.102788920596887	0.9792428493797098	1.0883734628793835	1.0	11.154219153163117	-6.775745548256439	24.988948375052214	1.0451325100735929	0.9005018712577927	0.4950935883239169	0.05807913272981592	157.9191963753347	275842.2056384016	0.014770893972902219	0.030977269132473458	1.6759245072228344e-07	6.775745548256439	-0.14463063881580018	
DLPEHAVLK	ddPTM_K562_Methotrexat_30min_R1	1	DLPEHAVLK	9	0	A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;A0A1X7SBS1;Q5RI18;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7;A0A1W2PQD4	A0A1W2PPS1	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	0		90.906	0.0191	7432400.0	6230.3	4470.7	8872.2	6196.2	5462.9	4782.1	4741.4	5963.6	6071.3	7792.7	False	True	5956.42347195058	5209.407186093217	7010.046465786788	5652.988766221109	6181.367103323943	5706.173145005444	5804.779645447278	5753.85680779934	5789.046588173592	6381.366517193092	0.9334087700341922	0.8163466511534315	1.0985180755406958	0.8858586559775966	0.9686588423764256	0.8941929803955786	0.9096452350460774	0.9016653082528523	0.9071797666810654	1.0	12.639649683021496	-8.273646747773551	24.44352556313192	0.9155850291814691	0.9393942445065786	0.010700215559471649	0.0721821321705387	2868.5614499565686	5743870.554073965	0.024640229917833874	0.0218889368380009	5.325412486369002e-09	8.273646747773551	0.02380921532510949	
DLQEQDADAGS(ph)ER	ddPTM_K562_Methotrexat_30min_R1	2	DLQEQDADAGSER	13	0	A0A087WW12;A0A087WZ11;Q6P158-3;Q6P158-2;Q6P158	A0A087WW12	DHX57	Putative ATP-dependent RNA helicase DHX57	1	DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER	254.72	9.581399999999998e-74	24436000.0	3376.5	3123.2	3313.8999999999996	3214.8	2867.8	2772.4	2855.0	4101.700000000001	3759.2	4504.9	True	False	3228.073102906944	3639.2557146769714	2618.3576771230173	2932.9634752989955	3244.965966595107	3308.127062841241	3495.306425897834	3957.4408861343095	3584.435612514976	3689.018956626477	0.8750492043713818	0.9865104401645545	0.7097707298087308	0.7950524271583367	0.8796284336696805	0.8967498139034902	0.9474894184588878	1.0727624153369215	0.9716500930623734	1.0	11.849021487237986	-8.764430810455343	1.813560759537057	1.017009818230337	0.8466923827244652	0.5124444534318456	0.07022752171065581	0.30061958393438126	2.0220071280979646	0.03934263964001011	0.024487684709880806	1.7201613665978856e-09	8.764430810455343	-0.17031743550587186	
DLS(ph)LY(ph)LPAMKK	ddPTM_K562_Methotrexat_30min_R1	2	DLSLYLPAMKK	11	1	O95397	O95397	PLEKHA8P1	Putative protein PLEKHA9	2	DLS(1)LY(1)LPAMKK;DLS(1)LY(1)LPAMKK	58.592	0.028223	22883700.0	10954.0	11276.3	11889.6	12281.2	11524.1	11889.6	11203.8	10003.9	10475.7	9598.0	True	False	10472.475275949259	13139.516910672368	9394.135440997563	11204.526263793081	13039.721143607878	14187.096929143407	13716.537350078504	9652.057166735496	9988.686993515414	7859.70919347842	1.332425286757273	1.67175611555385	1.1952268474248806	1.4255649907620014	1.659058983305332	1.8050409474329057	1.745171101426981	1.2280425304722817	1.2708723373383215	1.0	12.940260218915949	-9.39760829517618	5.968577530622762	1.171943062162658	1.5477901786860846	0.4621280150258029	0.18933308005139235	0.2394639476263754	10.536009953836206	0.11492540464967317	0.053801202580871135	4.003056361276393e-10	9.39760829517618	0.3758471165234265	
DLS(ph)QSSNLR	ddPTM_K562_Methotrexat_30min_R1	1	DLSQSSNLR	9	0	Q14586	Q14586	ZNF267	Zinc finger protein 267	1	DLS(0.999)QS(0.001)SNLR	86.189	0.019437	8785100.0	435.26	408.64	552.79	528.1	297.01	382.6	426.65	413.53	495.49	579.44	True	False	416.12649156560826	476.16081430763296	436.7669333223189	481.8022929281446	336.07202097022537	456.53203514754665	522.3371231556251	398.9859155089648	472.454778049863	474.4978011116003	0.8769829714505604	1.0035047858854913	0.9204825234155147	1.0153941531434543	0.7082688690714972	0.9621373040676574	1.1008209562445856	0.8408593560903028	0.9956943466187806	1.0	8.890257591388359	-8.503674774181025	24.944793698804318	0.9797101329515391	0.9091843861372365	0.12904251403677958	0.09814429172037736	1821.8760061767723	2366513.293285603	0.035005936176946896	0.0303927444494859	3.135632995826647e-09	8.503674774181025	-0.07052574681430257	
DLSSGT(ph)MVDVPALIK	ddPTM_K562_Methotrexat_30min_R1	2	DLSSGTMVDVPALIK	15	0	P53355-4;P53355;P53355-3	P53355-4	DAPK1	Death-associated protein kinase 1	1	DLS(0.021)S(0.118)GT(0.861)MVDVPALIK;DLS(0.08)S(0.08)GT(0.84)MVDVPALIK	55.31399999999999	0.030612999999999998	2457480.0	730.93	704.09	665.61	810.1700000000001	957.8700000000001	701.83	834.24	814.1400000000001	860.72	980.56	True	False	698.7991923908696	820.428905016301	525.9075570988417	739.1436539700719	1083.846694477458	837.4487146565673	1021.3395561264475	785.5062347410553	820.7053150680701	802.9710821793295	0.8702669472159211	1.0217415336920845	0.6549520509150658	0.92051092545447	1.3497954266744063	1.0429375767601277	1.2719506079278073	0.9782497180460432	1.022085767821935	1.0	9.649204221916193	-7.541540651831631	24.8375361175519	1.1162955930374108	0.853173810436532	0.4306956339417486	0.13913590221366637	201.6585932635925	268390.1758773734	0.04041813727717731	0.05218828553123352	2.8738185792439733e-08	7.541540651831631	-0.2631217826008788	
DLTHSDS(ph)ESSLHMSDR	ddPTM_K562_Methotrexat_30min_R1	1	DLTHSDSESSLHMSDR	16	0	E9PNJ4;Q13586;H0YDB2	E9PNJ4	STIM1	Stromal interaction molecule 1	1	DLT(0.131)HS(0.131)DS(0.338)ES(0.338)S(0.062)LHMSDR	161.49	1.3780000000000002e-08	22015000.0	4033.3	3329.9	3915.6	3738.9	3197.6	2854.6	3123.7	3107.5	3231.8	3625.9	True	False	3856.000961337059	3880.1093763777044	3093.769069840033	3411.1164420167406	3618.1404473061243	3406.211049482976	3824.2692408325975	2998.207463652234	3081.5543234001666	2969.214374310627	1.298660344197047	1.3067798034214229	1.0419487042118083	1.1488279430173214	1.218551438592628	1.1471758586894918	1.287973436313601	1.009764565870505	1.0378349067893158	1.0	11.535865542887239	-3.000000003711192	0.0827928349851055	0.844550983225196	1.9940378957578335	0.4321277411011948	0.08815405444448397	194.4414671128509	1.1717822856357285	2.3582471147645916	25.50127821455137	0.0009999999914546652	3.000000003711192	1.1494869125326375	
DLVLEEKS(ph)K	ddPTM_K562_Methotrexat_30min_R1	2	DLVLEEKSK	9	1	A0A494C151;Q5CZ79-2;Q5VUR7;Q5TYW2;Q5SQ80;Q5CZ79	A0A494C151	ANKRD20A8P;ANKRD20A3;ANKRD20A1;ANKRD20A2	Ankyrin repeat domain-containing protein 20B;Ankyrin repeat domain-containing protein 20A3;Ankyrin repeat domain-containing protein 20A1;Ankyrin repeat domain-containing protein 20A2	1	DLVLEEKS(1)K;DLVLEEKS(1)K	95.35799999999999	0.0086089	38116000.0	3958.8	3934.3	3605.1000000000004	4560.5	3968.6	4257.299999999999	3877.7	4081.3	4054.4	4043.6	True	False	3784.7758921332747	4584.376203334278	2848.438776606474	4160.688045633029	4490.540461339472	5079.962972382775	4747.372934397205	3937.7583656971374	3865.911828947842	3311.2648567148735	1.143000048594172	1.3844788628241795	0.8602268014985754	1.2565252934073277	1.3561405250423142	1.5341457697294072	1.433703777808672	1.1892006638224077	1.1675030528313695	1.0	11.693166696238725	-5.999847104690576	15.251228581388908	1.2559775746321302	1.0294381510731732	0.019216996950541687	0.1923381752248303	3423501.3662141445	99532346.74513675	0.05006113742862022	13650311.829277495	1.0003521164387126e-06	5.999847104690576	-0.22653942355895706	
DLVLPTQALPAS(ph)PALK	ddPTM_K562_Methotrexat_30min_R1	2	DLVLPTQALPASPALK	16	0	J3KSZ6;U3KQ35;H3BR06;Q15554	J3KSZ6	TERF2	Telomeric repeat-binding factor 2	1	DLVLPT(0.087)QALPAS(0.913)PALK;DLVLPTQALPAS(1)PALK	196.65	2.2764e-11	134577000.0	10715.2	7941.200000000001	16198.9	11377.099999999999	7825.4	6704.5	7052.200000000001	9909.0	9782.2	11977.400000000001	True	False	10244.172638018212	9253.348322679549	12798.972261066438	10379.687307087286	8854.577263056472	8000.049737707072	8633.835368377124	9560.494853525335	9327.427657146203	9808.17679662101	1.0444522820538273	0.9434320480303124	1.3049287881388698	1.0582687814786502	0.9027750464395116	0.8156510535641189	0.8802691414934063	0.9747474022714392	0.9509848619734884	1.0	13.259769269126094	-7.700998205449305	5.115185341768319	0.9120670495860285	1.096505376040234	0.4178077955392471	0.09676039059892143	0.19750634469206935	10.279381104547172	0.0302151590891415	0.03871399943548459	1.9906815646767907e-08	7.700998205449305	0.18443832645420544	
DLVSFPLS(ph)PAVR	ddPTM_K562_Methotrexat_30min_R1	2	DLVSFPLSPAVR	12	0	J3QLB5;E9PI66;Q7KZJ0;J3QKK3;O43502-2;O43502	J3QLB5	RAD51C	DNA repair protein RAD51 homolog 3	1	DLVSFPLS(1)PAVR;DLVS(0.009)FPLS(0.991)PAVR	110.15	0.0020933	8476700.0	3068.4	2558.4	3269.5	3087.8	2690.0	2508.2	2396.3	2598.06	3131.2	3827.5	True	False	2933.5168099984185	2981.1321146354903	2583.276630361118	2817.0973681187734	3043.78215012931	2992.874152004904	2933.731274388432	2506.6847572055744	2985.6311954423545	3134.302660766686	0.9359392271583775	0.9511309012851591	0.8241950155921506	0.89879557688589	0.9711194098226514	0.9548772010654557	0.9360076520723778	0.799758360474483	0.9525663340731859	1.0	11.613928783586905														
DLYANTVLSGGTTMYPGIADR	ddPTM_K562_Methotrexat_30min_R1	1	DLYANTVLSGGTTMYPGIADR	21	0	P60709;P63261;A0A2R8Y793	P60709	ACTB;ACTG1	Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed	0		87.447	0.0027178000000000003	7404700.0	1017.5	646.98	745.75	973.47	829.45	640.32	803.48	959.85	1381.2	1367.7	False	True	972.7719183200991	753.882448220322	589.2272662767409	888.1273965096776	938.5372135408013	764.0527776938759	983.6808431104696	926.0915314518405	1316.9883134724641	1119.996276716028	0.8685492430139058	0.6731115664337756	0.5260975223992981	0.7929735258708006	0.8379824407030282	0.6821922479369094	0.8782893868136307	0.826870187611033	1.1758863318135682	1.0	10.129278220898314	-9.399117773888058	1.4743910597631527	1.0750420054373233	0.727687169622046	0.565591715244532	0.11271761594853567	0.30942530917889477	1.1832236176658126	0.09805421160068796	0.03448372434266329	3.98916707704829e-10	9.399117773888058	-0.34735483581527726	
DMGSVALDAGTAKDSLS(ph)PVLHPSDLILTR	ddPTM_K562_Methotrexat_30min_R1	2	DMGSVALDAGTAKDSLSPVLHPSDLILTR	29	1	Q9HCN4-3;Q9HCN4-2;Q9HCN4-4;Q9HCN4;Q9HCN4-5	Q9HCN4-3	GPN1	GPN-loop GTPase 1	1	DMGS(0.002)VALDAGT(0.047)AKDS(0.232)LS(0.715)PVLHPS(0.004)DLILTR;DMGSVALDAGT(0.009)AKDS(0.082)LS(0.91)PVLHPSDLILTR	68.771	0.00011183	49039000.0	3327.8999999999996	2518.1000000000004	4528.1	3955.5	2246.8	1889.7	2523.5	3008.8	3371.0	5142.0	True	False	3181.6095007149456	2934.1732246183683	3577.7136901477834	3608.727456309934	2542.293581751126	2254.8577804974366	3089.4591123478735	2902.978798595925	3214.2829457831413	4210.733973001255	0.7555949915418694	0.6968317740878316	0.8496650971274068	0.8570305033394847	0.6037649488312541	0.5355023126503187	0.7337103536241263	0.6894234632749285	0.7633545520549994	1.0	12.039856016033411	-10.164284431217604	4.172216389267683	0.9999906627817067	0.7150041687440137	0.4570390023107411	0.09268944161894968	1.3192086315586558	32.32920047160811	0.0987228576973288	0.025875587407012842	6.850394286299801e-11	10.164284431217604	-0.28498649403769294	
DMPGGFLFEGLS(ph)DDEDDFHPNTR	ddPTM_K562_Methotrexat_30min_R1	12	DMPGGFLFEGLSDDEDDFHPNTR	23	0	H3BUV9;Q96S82	H3BUV9	UBL7	Ubiquitin-like protein 7	1	DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR	152.52	7.146599999999999e-22	901729600.0	28510.100000000002	25721.2	33479.6	30494.000000000004	25419.86	25129.8	25019.660000000003	27836.9	27508.6	32915.200000000004	True	False	27256.830141029855	29971.19111435367	26452.689485804593	27820.63836498929	28763.01714750411	29985.778193546288	30630.955646857805	26857.86044889487	26229.731190261104	26953.938325190753	1.0112373862470414	1.1119410734253643	0.9814035027705876	1.0321548572732517	1.0671174208565513	1.11248225887354	1.13641855514044	0.9964354791074783	0.973131676484812	1.0	14.71820846466485	-9.489106600900246	24.01361676123751	0.9859717276144401	1.064150671774739	0.36141366972477507	0.04569859365015609	413.35628895865943	293917.8485580149	0.026303411290948545	0.012620796489462464	3.242600154809245e-10	9.489106600900246	0.07817894416029902	
DMQPLS(ph)PISVHER	ddPTM_K562_Methotrexat_30min_R1	4	DMQPLSPISVHER	13	0	P28749;P28749-2	P28749	RBL1	Retinoblastoma-like protein 1	1	DMQPLS(0.76)PIS(0.24)VHER;DMQPLS(1)PISVHER;DMQPLS(1)PISVHER;DMQPLS(0.525)PIS(0.475)VHER	150.76	3.1203999999999997e-09	235825000.0	11059.4	10374.22	12911.6	11854.1	9802.510000000002	9739.29	9776.010000000002	11079.5	11928.7	12625.7	True	False	10573.242018151648	12088.38352341065	10201.63160745393	10814.869457677562	11091.711882700394	11621.269954501173	11968.52909724746	10689.827705079622	11374.137340659563	10339.063384465573	1.0226498885806163	1.1691952233868135	0.986707521571235	1.0460202298330898	1.072796584201783	1.1240157374373112	1.1576028361747115	1.0339261215035274	1.10011293264235	1.0	13.335817877408315	-8.005354189881494	23.408441131365052	1.0908507846416655	1.0592773761072503	0.034433141101332776	0.0600012182725846	349.62085299956345	1528561.7079491178	0.01868106882013535	0.020550475635737395	9.877472065328145e-09	8.005354189881494	-0.03157340853441526	
DMRKSQERSMSYCDES(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	DMRKSQERSMSYCDESR	17	3	Q6P435	Q6P435		Putative uncharacterized SMG1-like protein	1	DMRKSQERSMS(0.001)YCDES(0.999)R	68.08800000000001	0.020593	79946000.0	1708.5	1784.1	1627.1	1847.6	1972.1	1768.2	2128.1	1959.8	2201.7	1786.1	True	False	1633.3963857001363	2078.8922004851397	1285.593945637123	1685.6237765840547	2231.4657168290014	2109.8796250598316	2605.3805971814995	1890.8727231747855	2099.343447561776	1462.6199823371342	1.1167606113859574	1.4213481461967028	0.8789664855958418	1.152468718423073	1.5256633601185465	1.4425343907092225	1.7813106812737083	1.2927983659524072	1.4353307577592476	1.0	10.514339262057451	-7.750914996055563	24.346094619181542	1.4474778001971162	1.1434960428340195	0.2559552583075356	0.22132882034153625	190.92821217580874	441671.8841362366	0.06386628186684669	0.08150836439561401	1.7745367748820005e-08	7.750914996055563	-0.30398175736309674	
DMRRLMET(ph)NLS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	DMRRLMETNLSK	12	2	E9PIW3	E9PIW3	NRIP3		2	DMRRLMET(1)NLS(1)K	57.885	0.026793	7893200.0	643.21	464.36	658.51	809.19	684.55	451.1	702.93	641.02	446.51	607.53	True	False	614.9352585579079	541.087597229572	520.2977500716013	738.2495690485235	774.5803237438736	538.2686906823272	860.5799460442605	618.474963266405	425.7518475590716	497.5004299139346	1.2360497028400337	1.087612320904281	1.045823719512384	1.4839174494306215	1.5569440289285228	1.0819461819871097	1.7298074419616825	1.2431646810303227	0.8557818686362237	1.0	8.95855396213339	-9.681804802417235	5.647317122057961	0.9307700950199143	1.3161223112281704	0.33936474349835566	0.21356463193159705	0.22736348489932676	11.749472387188886	0.1599377999806139	0.05675856023866649	2.080631635683849e-10	9.681804802417235	0.3853522162082561	
DMSPLSETEMALGKDVT(ph)PPPETEVVLIK	ddPTM_K562_Methotrexat_30min_R1	2	DMSPLSETEMALGKDVTPPPETEVVLIK	28	1	E7EVA0;P27816;P27816-6;P27816-2	E7EVA0	MAP4	Microtubule-associated protein;Microtubule-associated protein 4	1	DMS(0.031)PLS(0.029)ET(0.254)EMALGKDVT(0.683)PPPET(0.003)EVVLIK;DMS(0.03)PLS(0.18)ET(0.162)EMALGKDVT(0.619)PPPET(0.009)EVVLIK	52.79	0.0041271	11967700.0	2144.23	1371.31	3625.12	2604.23	1348.2	1409.08	1333.73	1805.83	1942.85	3166.2	True	False	2049.9722166285082	1597.8956692154466	2864.2568521959615	2375.921199227915	1525.5119311540273	1681.3647676050846	1632.8529034720543	1742.3179353458124	1852.5273275629725	2592.7704988947053	0.7906493141226378	0.6162888963356484	1.1047089796096456	0.9163638664666878	0.588371370240579	0.6484819108832997	0.629771475789368	0.6719908052365453	0.7144972254014393	1.0	11.340278795226666														
DNEESEQPPVPGT(ph)PTLR	ddPTM_K562_Methotrexat_30min_R1	2	DNEESEQPPVPGTPTLR	17	0	A0A2R8YDC1;A0A2R8Y6V8;O15439-4;O15439-3;O15439-2;O15439	A0A2R8YDC1	ABCC4	Multidrug resistance-associated protein 4	1	DNEESEQPPVPGT(1)PTLR;DNEESEQPPVPGT(0.973)PT(0.026)LR	142.26	1.0169e-06	22879300.0	1902.57	1848.74	2028.1799999999998	2256.1	1561.49	1474.2800000000002	1587.37	2019.92	2158.12	2743.3999999999996	True	False	1818.935300872994	2154.2128617930043	1602.4927347196242	2058.311215821221	1766.8533046860275	1759.163744844028	1943.3781300446396	1948.878268698444	2057.7894722496344	2246.543675910472	0.8096594428042099	0.9589009485515353	0.7133147474064447	0.9162124190561466	0.7864762762602259	0.7830534361327651	0.8650524585314522	0.8675007254905066	0.9159801762659523	1.0	11.13349139477936	-9.9630958451129	1.2657102414313481	0.9990552773329253	0.8322716688704793	0.3937964389531249	0.06565508450270861	0.4592637624083496	1.6578476047572377	0.059291267776795796	0.018414323576322642	1.0886898022031172e-10	9.9630958451129	-0.166783608462446	
DNGDGT(ph)YT(ph)VSY(ph)LPDMS(ph)GR	ddPTM_K562_Methotrexat_30min_R1	1	DNGDGTYTVSYLPDMSGR	18	0	Q14315-2;Q14315	Q14315-2	FLNC	Filamin-C	4	DNGDGT(0.543)Y(0.478)T(0.616)VS(0.391)Y(0.974)LPDMS(0.999)GR	42.788999999999994	0.032542	0.0	72.78699999999999	0.0	0.0	0.0	74.61399999999999	70.751	0.0	0.0	0.0	0.0	True	False	69.58737063269292	0.0	0.0	0.0	84.42704882890268	84.42262942687945	0.0	0.0	0.0	0.0											0.0														
DNIQGITKPAIR	ddPTM_K562_Methotrexat_30min_R1	1	DNIQGITKPAIR	12	1	P62805	P62805	HIST1H4A	Histone H4	0		157.03	8.852400000000001e-07	22568000.0	1151.6	901.3	1904.0	1659.0	1232.9	1165.9	796.32	974.34	1042.4	1704.5	False	True	1100.9770428869053	1050.2245055194526	1504.3764196995155	1513.5580457636663	1395.0479601838008	1391.1936742773769	974.9150308479728	940.0719099388313	993.9390515230936	1395.7985330573013	0.7887793380004271	0.7524184046956138	1.077789082070741	1.0843671274309403	0.9994622627437095	0.9967009144436926	0.6984640030481748	0.6735011448104443	0.7120934919927228	1.0	10.446875005339702	-8.760821231871757	24.999989591162027	0.7438064011989951	0.9551176615855577	0.2929713432387038	0.1333583179743365	19.551611869062693	790787.9267748056	0.05631091222216143	0.04095577367321682	1.7345178283668675e-09	8.760821231871757	0.21131126038656256	
DNLTLWTSDQQDDDGGEGNN	ddPTM_K562_Methotrexat_30min_R1	1	DNLTLWTSDQQDDDGGEGNN	20	0	P61981	P61981	YWHAG	14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed	0		148.52	5.6494e-12	6121200.0	2639.8	2053.1	2781.4	2607.2	2090.2	2102.0	2216.5	2850.3	3323.2	3213.0	False	True	2523.75755280727	2392.339878266936	2197.6221500799547	2378.630823939136	2365.0979368774288	2508.181750862892	2713.6065474614866	2750.0533334345814	3168.705157349907	2631.0945653934346	0.9592044261738215	0.9092565161789246	0.8352501574763196	0.9040461164813561	0.898902672669148	0.9532845317887071	1.031360325528898	1.0452126539295856	1.2043296349084596	1.0	11.361447386671168	-8.82113813438776	1.5323099578064627	1.0966468396510054	0.8971666834801084	0.6804922986498235	0.055588419500768066	0.21938285180333386	1.0403823934070153	0.032606057440844986	0.018497871686841406	1.5095999251112258e-09	8.82113813438776	-0.19948015617089698	
DNSNIVAMFEMMDSS(ph)GR	ddPTM_K562_Methotrexat_30min_R1	1	DNSNIVAMFEMMDSSGR	17	0	A0A2R8YDC4;A0A2R8Y6P2	A0A2R8YDC4			1	DNSNIVAMFEMMDS(0.04)S(0.96)GR	56.799	0.025611000000000002	54646000.0	2800.5	3664.0	5172.1	3771.9	3747.7	3873.3	3162.3	2374.5	2910.5	2402.1	True	False	2677.393373224018	4269.413722648702	4086.5468909285014	3441.2233832525462	4240.58823941993	4621.76040704912	3871.526273420919	2290.987489120587	2775.191490270494	1967.0564131750893	1.3611167200346588	2.1704582004119053	2.077493489031295	1.7494279066953429	2.1558040791392754	2.3495820333840793	1.9681826344633215	1.1646780813076072	1.4108347232355007	1.0	10.94182261789667	-9.256887630592741	20.247259577448542	1.2158168136467173	1.9999604730355223	0.6344494565934411	0.27216265647961047	17.351984688451175	77192.10258720358	0.13320956604714135	0.07306353218349103	5.534933016145487e-10	9.256887630592741	0.7841436593888049	
DPAQPMS(ph)PGEATQSGAR	ddPTM_K562_Methotrexat_30min_R1	2	DPAQPMSPGEATQSGAR	17	0	Q9BQG0-2;Q9BQG0	Q9BQG0-2	MYBBP1A	Myb-binding protein 1A	1	DPAQPMS(0.991)PGEAT(0.009)QSGAR;DPAQPMS(0.93)PGEAT(0.069)QSGAR	86.411	0.0078238	53258000.0	9473.2	7670.700000000001	11477.4	8147.700000000001	8477.8	7596.2	7516.0	10335.3	9974.9	9921.4	True	False	9056.769470889396	8938.152795393398	9068.45058795127	7433.403791120324	9592.779298277424	9064.058142675887	9201.65432471037	9971.801640896192	9511.169076206546	8124.538319668353	1.1147426616185985	1.1001428565799733	1.1161804192612201	0.9149324550694911	1.180716850710725	1.1156397798916267	1.1325756569372651	1.2273684052613645	1.1706719449130245	1.0	12.98807011826294														
DPAQPMS(ph)PGEATQSGARPADR	ddPTM_K562_Methotrexat_30min_R1	3	DPAQPMSPGEATQSGARPADR	21	1	Q9BQG0-2;Q9BQG0	Q9BQG0-2	MYBBP1A	Myb-binding protein 1A	1	DPAQPMS(0.988)PGEAT(0.006)QS(0.006)GARPADR;DPAQPMS(0.997)PGEAT(0.003)QSGARPADR;DPAQPMS(0.967)PGEAT(0.029)QS(0.004)GARPADR	73.461	0.005848699999999999	771010000.0	5546.700000000001	5075.2	7269.200000000001	5095.4	5329.200000000001	4973.6	4468.3	6202.3	6474.5	6730.8	True	False	5302.8737094310545	5913.79053635008	5743.494259495651	4648.694193118856	6030.083209839823	5934.677809748661	5470.43001850763	5984.161593502895	6173.501908179455	5511.7868972144815	0.9620970128781636	1.0729352652111352	1.04203851973999	0.8434096382550982	1.0940341711845347	1.0767248299726353	0.9924966477336502	1.0857026414658992	1.1200545346372857	1.0	12.428304394715335														
DPSSNDINGGMEPTPSTVSTPSPS(ph)ADLLGLR	ddPTM_K562_Methotrexat_30min_R1	1	DPSSNDINGGMEPTPSTVSTPSPSADLLGLR	31	0	O95782-2;O95782	O95782-2	AP2A1	AP-2 complex subunit alpha-1	1	DPSSNDINGGMEPT(0.001)PS(0.002)T(0.066)VS(0.058)T(0.05)PS(0.134)PS(0.688)ADLLGLR	55.336000000000006	0.012517	0.0	248.25	179.25	271.53	236.18	203.91	207.49	411.82	366.41	326.13	369.34	True	False	237.33722724615686	208.86801577095525	214.5395636770008	215.4744660931058	230.7277391200251	247.58450594031484	504.18111814824704	353.5231526168349	310.9682874839085	302.4489470222256	0.7847183122403665	0.6905893302898704	0.7093414137799438	0.7124325219663323	0.7628650765415624	0.8185993318142417	1.666995779327997	1.168868849098212	1.02816786285937	1.0	8.24054782771949	-8.550600061757205	24.792141135716793	1.2318976464342049	0.7336833440954224	0.6444019340221883	0.17173314188080288	118.12441639273392	105641.6464337738	0.06476834305515679	0.05017040320079413	2.8144914795879977e-09	8.550600061757205	-0.4982143023387825	
DQALILMNARGSS(ph)S(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	DQALILMNARGSSSR	15	1	P46939;P46939-2	P46939	UTRN	Utrophin	2	DQALILMNARGS(0.2)S(0.803)S(0.996)R	65.956	0.031527	0.0	509.57	329.05	610.57	569.67	195.61	212.68	449.22	496.82	375.22	514.14	True	False	487.1699129418901	383.41991960632004	482.41970093273824	519.7279155697333	221.3361436382135	253.77739998740262	549.969020189781	479.3465589997433	357.7761040987099	421.0242638815374	1.1571065012988513	0.9106836648117791	1.1458239876371483	1.2344369675472384	0.5257087598649429	0.6027619350195155	1.3062644302717061	1.13852478377497	0.84977549939824	1.0	8.717759568845153														
DQDS(ph)SDDERALEDWVSSETSALPRPR	ddPTM_K562_Methotrexat_30min_R1	2	DQDSSDDERALEDWVSSETSALPRPR	26	2	Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9	Q5TAQ8	DCAF8	DDB1- and CUL4-associated factor 8	1	DQDS(0.5)S(0.5)DDERALEDWVSSETSALPRPR;DQDS(0.5)S(0.5)DDERALEDWVSSETSALPRPR	64.592	0.001159	17528000.0	2882.33	2397.27	3900.0	2923.13	2605.8199999999997	2980.77	2075.45	2946.95	2743.6000000000004	3254.5	True	False	2755.6262244044933	2793.3781208771998	3081.443296653419	2666.8637313521062	2948.531004628238	3556.7616163271114	2540.92249444121	2843.3040981528393	2616.050634841479	2665.0785132502097	1.03397562612287	1.04814102360929	1.1562298376325992	1.0006698557258336	1.106358026590497	1.3345804255460547	0.9534137481534889	1.0668744219040938	0.981603589475892	1.0	11.37996232008865														
DQEPDVHYDFEPHVS(ph)ANAWSPVMR	ddPTM_K562_Methotrexat_30min_R1	1	DQEPDVHYDFEPHVSANAWSPVMR	24	0	K7ES92;F5H1R4;K7ES98;K7EM85;Q92619;Q92619-2	K7ES92	HMHA1	Minor histocompatibility protein HA-1;Minor histocompatibility antigen HA-1	1	DQEPDVHYDFEPHVS(0.733)ANAWS(0.267)PVMR	94.456	0.00053356	29996000.0	2321.3	2172.8	2728.7	2578.3	2240.2	2054.9	1715.7	2300.8	2353.2	3133.9	True	False	2219.2584314461383	2531.8182687148196	2155.9831598918427	2352.2644420689944	2534.825566066794	2451.980342458688	2100.489399268971	2219.8795598941456	2243.8002456294535	2566.320341888104	0.8647628260676826	0.9865558197820696	0.8401067959838692	0.916590342863579	0.9877276521924234	0.9554459365173043	0.8184829325413016	0.8650048568219377	0.8743258622104189	1.0	11.325485551273541	-11.416174415291945	9.858251316962379	0.9999999999932815	0.902850688437983	0.21593356539167352	0.05649518424703184	0.0	0.0	0.056940526881984865	0.013810106277220322	3.835531772800253e-12	11.416174415291945	-0.09714931155529849	
DQGFRGDGGSTTGLSAT(ph)PPASLPGSLTNVK	ddPTM_K562_Methotrexat_30min_R1	2	DQGFRGDGGSTTGLSATPPASLPGSLTNVK	30	1	H7C560;P15056;A0A2R8Y679;A0A2R8Y492;A0A2R8YDP5	H7C560	BRAF	Serine/threonine-protein kinase B-raf	1	DQGFRGDGGS(0.002)T(0.002)T(0.002)GLS(0.018)AT(0.972)PPAS(0.005)LPGSLTNVK;DQGFRGDGGS(0.001)T(0.001)T(0.001)GLS(0.023)AT(0.956)PPAS(0.018)LPGSLTNVK	83.165	0.00027562	21056800.0	2331.9	1675.94	3198.3	2129.3	1509.77	1396.56	1706.5	2184.5	2394.7	3024.8	True	False	2229.3924681382205	1952.8605988907943	2527.020537355548	1942.6275749515223	1708.3312181415336	1666.4254547978514	2089.226065076935	2107.669896813614	2283.3709196875975	2476.9794090887185	0.900044812628626	0.7884040504031692	1.0202024805225327	0.784272799290736	0.6896832536730813	0.6727651625537452	0.843457179099265	0.8509032772254761	0.9218368595674561	1.0	11.274366160299627	-9.86592778963825	1.7392275954180858	0.9977601141652709	0.8105712050890623	0.2937722371504937	0.09370239786145955	0.4660471551646825	3.0051470284773543	0.09666200134824256	0.028180347224676616	1.361671069377678e-10	9.86592778963825	-0.18718890907620855	
DQGSPALSANVS(ph)LRVLVGDR	ddPTM_K562_Methotrexat_30min_R1	1	DQGSPALSANVSLRVLVGDR	20	1	Q9Y5F8-2;Q9Y5G0-2;Q9Y5G0;Q9Y5F8	Q9Y5F8-2	PCDHGB7;PCDHGB5	Protocadherin gamma-B7;Protocadherin gamma-B5	1	DQGSPALSANVS(1)LRVLVGDR	56.131	0.029866000000000004	11464000.0	3690.8	4234.9	3182.9	3912.2	4294.8	3899.3	4255.6	4365.4	3933.2	3390.8	True	False	3528.5568512391383	4934.645244007912	2514.8527869020945	3569.2235000823484	4859.641478949947	4652.784539076916	5210.026629089606	4211.866407667728	3750.3463904936966	2776.693262476208	1.2707766100503413	1.7771661388364082	0.9057006119067654	1.2854223216933136	1.7501542372801384	1.6756566531686836	1.87634215831366	1.5168641292094527	1.3506520295832753	1.0	11.439152098064326	-7.740309811074293	24.726840823675047	1.578893544266479	1.3142901524204555	0.099012065919728	0.30035895944274166	419.0498881328709	490389.99131045904	0.08813396586418329	0.11365687020989002	1.818403208134931e-08	7.740309811074293	-0.26460339184602355	
DQLEMYHMNQSTAMRQMVFMQK	ddPTM_K562_Methotrexat_30min_R1	2	DQLEMYHMNQSTAMRQMVFMQK	22	1	F8W1C8;Q8WXB4	F8W1C8	ZNF606	Zinc finger protein 606	0	;	46.361999999999995	0.024863	22803700.0	296.86	191.872	254.45	65.03	226.651	119.88	268.48	119.93	160.26	282.8	False	True	283.81038985012736	223.57558673363863	201.04442226499052	59.32892086558842	256.4595792226611	143.04511336510166	328.6934743345185	115.71199392302888	152.80954757971116	231.58217961197087	1.2255277600619694	0.9654265587630804	0.8681342519612342	0.25618949163099425	1.1074236353262317	0.6176861864102924	1.4193383743311472	0.49965845436341827	0.6598502001999993	1.0	7.855380431121791	-6.437956732859617	2.3410612765455787	0.793210479785749	1.249034380091454	0.15060586239545626	0.3100338039063191	0.7636816489922562	6.491518608564908	0.08083638945524006	0.6040629407789124	3.647902878119292e-07	6.437956732859617	0.4558239003057051	
DQMS(ph)TSSVQALAERK	ddPTM_K562_Methotrexat_30min_R1	1	DQMSTSSVQALAERK	15	1	O43752-2;O43752	O43752-2	STX6	Syntaxin-6	1	DQMS(0.312)T(0.312)S(0.312)S(0.064)VQALAERK	62.475	0.024263999999999997	88745000.0	3239.5	2570.6	3955.3	3762.9	2484.3	2635.3	2427.2	3063.5	3500.8	4125.6	True	False	3097.0954588677764	2995.3479572709484	3125.1365823726333	3433.0123992791423	2811.0289946342923	3144.5344281869575	2971.561385968204	2955.754968591672	3338.0485721143937	3378.4138621186253	0.9167306272315517	0.8866136830827903	0.9250307126116395	1.016160997257535	0.8320558431735411	0.9307724146665085	0.8795729319275047	0.8748942815247919	0.9880519996508308	1.0	11.72213035651161	-9.833010345260176	7.211336444739715	0.9968923861288641	0.908602996169678	0.36463587629032423	0.0455803857009047	0.26716750320085186	21.932723529598725	0.043478164848622075	0.011311033280622726	1.4688912870000522e-10	9.833010345260176	-0.08828938995918612	
DQPAFTPSGILTPHALGS(ph)RNSPGSQVASNPR	ddPTM_K562_Methotrexat_30min_R1	2	DQPAFTPSGILTPHALGSRNSPGSQVASNPR	31	1	Q9H0D6-2;Q9H0D6	Q9H0D6-2	XRN2	5-3 exoribonuclease 2	1	DQPAFTPSGILTPHALGS(0.407)RNS(0.407)PGS(0.154)QVAS(0.031)NPR;DQPAFTPSGILT(0.004)PHALGS(0.409)RNS(0.293)PGS(0.067)QVAS(0.226)NPR	84.665	5.2292e-06	105070000.0	2699.0699999999997	2329.13	3408.3	3279.7599999999998	2341.92	2364.08	2325.31	2660.56	2433.22	2605.14	True	False	2580.422114575164	2713.979144059165	2692.9444071753483	2992.2285329559018	2649.9235290077454	2820.905001703116	2846.819959791414	2566.9865967802357	2320.1001332952987	2133.323901677263	1.2095782138597815	1.272183348213264	1.2623232717067014	1.4026133259011209	1.242157145909405	1.3223050655764286	1.3344527558863357	1.2032802870497152	1.0875517456449948	1.0	11.058887310756607	-9.755554811383803	2.0598628434967194	1.0058259035461194	1.2936414858623038	0.7878722693993253	0.051778690274475174	0.13331667749419637	1.0812637569631611	0.04860605700925524	0.014128699929706135	1.7556792996618832e-10	9.755554811383803	0.2878155823161843	
DQQNLPYGVTPAS(ph)PSGHSQGR	ddPTM_K562_Methotrexat_30min_R1	1	DQQNLPYGVTPASPSGHSQGR	21	0	Q7KZI7-10;Q7KZI7-13;Q7KZI7-7;Q7KZI7-2;Q7KZI7-15;Q7KZI7-5;Q7KZI7-4;Q7KZI7-16;Q7KZI7-9;Q7KZI7;Q7KZI7-11;E9PC69;E7ETY4;Q7KZI7-8;Q7KZI7-14;Q7KZI7-6;Q7KZI7-3;Q7KZI7-12	Q7KZI7-10	MARK2	Serine/threonine-protein kinase MARK2	1	DQQNLPYGVT(0.216)PAS(0.748)PS(0.036)GHSQGR	243.16	7.0501e-77	36077000.0	2215.7	2288.7	2544.0	2346.4	2127.3	2009.7	1747.3	2272.5	2445.9	2908.3	True	False	2118.3004810042685	2666.8687737516602	2010.0491658170001	2140.6947550210166	2407.077237163597	2398.0460821642037	2139.176503667701	2192.574886934738	2332.1906428629445	2381.578687996801	0.889452232538249	1.1197903252967145	0.8439986366806538	0.8988553541439367	1.0107065742968349	1.0069144867017825	0.8982178562686964	0.9206392793088696	0.9792624760278663	1.0	11.217702501181503	-6.770659537480766	24.998068866718086	0.9432542212481286	1.004621305375628	0.09548209569418642	0.07349123583075617	401.7227220921944	1089175.7390976367	0.018828140264236612	0.04005013948530593	1.6956665870460126e-07	6.770659537480766	0.06136708412749947	
DQQNLPYGVTPAS(ph)PSGHSQGRR	ddPTM_K562_Methotrexat_30min_R1	3	DQQNLPYGVTPASPSGHSQGRR	22	1	Q7KZI7-10;Q7KZI7-13;Q7KZI7-7;Q7KZI7-2;Q7KZI7-15;Q7KZI7-5;Q7KZI7-4;Q7KZI7-16;Q7KZI7-9;Q7KZI7;Q7KZI7-11;E9PC69;E7ETY4;Q7KZI7-8;Q7KZI7-14;Q7KZI7-6;Q7KZI7-3;Q7KZI7-12	Q7KZI7-10	MARK2	Serine/threonine-protein kinase MARK2	1	DQQNLPYGVT(0.003)PAS(0.909)PS(0.085)GHS(0.003)QGRR;DQQNLPYGVT(0.005)PAS(0.903)PS(0.085)GHS(0.007)QGRR;DQQNLPYGVT(0.006)PAS(0.921)PS(0.071)GHS(0.002)QGRR	104.55	3.2717e-05	61855000.0	4505.0	3990.7	4901.700000000001	4799.5	3928.3999999999996	3949.5	3659.2	4713.4	4297.799999999999	5563.700000000001	True	False	4306.965594134692	4650.095344698194	3872.9001556938647	4378.73528670447	4445.053456716721	4712.684978607513	4479.868747336374	4547.62705041945	4097.996216074394	4556.060016644705	0.9453267907797541	1.020639615744733	0.8500546835522261	0.9610793691715184	0.9756354043795642	1.0343772824305668	0.9832769390591914	0.9981490660363458	0.899460542903987	1.0	12.15357103634933	-7.666614611987174	4.222139029907069	0.9844870835500402	0.9412646667555618	0.12545412101803421	0.04997514111164176	0.46295586425665813	15.038016650421735	0.015219248970480943	0.019735151481594874	2.1546929367591442e-08	7.666614611987174	-0.04322241679447847	
DQQNLPYGVTPASPSGHS(ph)QGRR	ddPTM_K562_Methotrexat_30min_R1	1	DQQNLPYGVTPASPSGHSQGRR	22	1	Q7KZI7-10;Q7KZI7-13;Q7KZI7-7;Q7KZI7-2;Q7KZI7-15;Q7KZI7-5;Q7KZI7-4;Q7KZI7-16;Q7KZI7-9;Q7KZI7;Q7KZI7-11;E9PC69;E7ETY4;Q7KZI7-8;Q7KZI7-14;Q7KZI7-6;Q7KZI7-3;Q7KZI7-12	Q7KZI7-10	MARK2	Serine/threonine-protein kinase MARK2	1	DQQNLPYGVT(0.001)PAS(0.305)PS(0.245)GHS(0.449)QGRR	93.229	0.00019982	20486000.0	1466.7	1272.4	1860.2	1593.7	1122.6	1357.7	1000.5	1323.0	1553.4	1904.6	True	False	1402.2256241769921	1482.6424728979841	1469.7694411371008	1453.9827953788747	1270.2415768532207	1620.0563097747627	1224.8875933838115	1276.469340116462	1481.1827730583018	1559.6584840486553	0.8990594021179628	0.9506199517789636	0.9423662014274977	0.9322443408280887	0.8144357177193376	1.0387250326554331	0.7853562853094446	0.8184287478133843	0.9496840418636767	1.0	10.607014443679937	-7.583758948857193	24.99997768560215	0.8913217816327106	0.9334508662777783	0.02495207628611562	0.07807394483729398	217.89343938268058	89474.22159213007	0.022561144562448524	0.02912631595239557	2.607600472980486e-08	7.583758948857193	0.042129084645067705	
DQSFT(ph)TWLVAMNT(ph)T(ph)TK	ddPTM_K562_Methotrexat_30min_R1	1	DQSFTTWLVAMNTTTK	16	0	H7C3M6;H7C075;Q5VT40	H7C3M6	FAM78B	Protein FAM78B	3	DQS(0.042)FT(0.48)T(0.48)WLVAMNT(0.667)T(0.666)T(0.666)K	58.676	0.030655	0.0	0.0	0.0	0.0	158.78	0.0	0.0	0.0	0.0	0.0	74.376	True	False	0.0	0.0	0.0	144.86000392185346	0.0	0.0	0.0	0.0	0.0	60.90578568182446	0.0	0.0	0.0	2.37842763704931	0.0	0.0	0.0	0.0	0.0	1.0	5.92850737684504	-12.162641327015873	5.009977400340343	1.0000459508890496	0.2798150166303069	0.08793230669261287	0.7092634544964506	2405763548.7644124	141.9392112284224	1275265.2768508147	0.17871487544269982	6.876361070866013e-13	12.162641327015873	-0.7202309342587427	
DQT(ph)PLQLSVEDTTSPNTK	ddPTM_K562_Methotrexat_30min_R1	1	DQTPLQLSVEDTTSPNTK	18	0	A0A087WVI8;Q8IUC6	A0A087WVI8	TICAM1	TIR domain-containing adapter molecule 1	1	DQT(0.995)PLQLS(0.004)VEDTTSPNTK	76.85	0.017111	0.0	2071.0	1729.1	3504.3	2679.7	2341.6	1717.3	1350.0	1801.8	1762.6	2144.3	True	False	1979.9613197453818	2014.8043853252923	2768.7953190929716	2444.7748615026503	2649.561443398806	2049.143920436178	1652.7718651355783	1738.4296727300375	1680.6571107200732	1755.9464913081656	1.1275749742637813	1.1474178713864338	1.5768107586411941	1.392283235055365	1.5089078491366241	1.1669740112123708	0.9412427276780382	0.9900242868078069	0.957123191987472	1.0	10.778033167177417	-8.546037564902315	4.114498374646765	0.9745936636397584	1.354412201801914	0.6473736746652108	0.13142775535357049	0.14584517583926587	5.6562113518587065	0.055763488408014546	0.044032370487704024	2.8442150824877225e-09	8.546037564902315	0.3798185381621556	
DQVANSAFVER	ddPTM_K562_Methotrexat_30min_R1	1	DQVANSAFVER	11	0	P07900;P07900-2	P07900	HSP90AA1	Heat shock protein HSP 90-alpha	0		123.67	0.019205	28923000.0	1514.5	1104.7	1682.2	1473.0	1274.2	1340.8	1011.4	1636.0	1414.8	1679.2	False	True	1447.9243934110962	1287.2328983105965	1329.1292086231751	1343.864376980035	1441.779634087274	1599.8906239566934	1238.232195850462	1578.460952706373	1349.0262568062858	1375.0806082193137	1.0529741927537708	0.9361145016636682	0.9665827593513633	0.9772986172209187	1.0485055388529791	1.1634886088812653	0.900479716206553	1.1479043070430834	0.9810524915722814	1.0	10.425300477604548	-7.761281411486544	24.997653065852443	1.0468082379179837	0.9786862378744731	0.1117638675813547	0.07697008748615236	7.947284646931838	1257458.8924736457	0.02211456797833013	0.026762797662730407	1.7326809019341133e-08	7.761281411486544	-0.06812200004351066	
DRDYFDYSR	ddPTM_K562_Methotrexat_30min_R1	4	DRDYFDYSR	9	1	Q9HCG8;B7WP74	Q9HCG8	CWC22	Pre-mRNA-splicing factor CWC22 homolog	0	;;;	139.98	0.00021688	83224000.0	10611.800000000001	8480.2	12439.3	10141.099999999999	9360.2	8486.900000000001	8560.0	10041.3	10272.0	11594.6	False	True	10145.317978210549	9881.408911246053	9828.460923092533	9252.045508073486	10591.230364922065	10126.87331179747	10479.797900415226	9688.141787536984	9794.456962054115	9494.705586028853	1.0685237036879849	1.0407283113429258	1.0351517310399587	0.9744425905830685	1.1154880231891247	1.0665810772162152	1.1037517493787172	1.0203730594651368	1.0315703708039496	1.0	13.212907550317382	-5.9026304713526025	18.75947988040731	1.0467441245224403	2.5295461657437435	0.026678586635760504	0.04108268740519528	1307.6060290411992	251906.91765515853	0.010107518583277757	6.90486909922476	1.2513232922734586e-06	5.9026304713526025	1.4828020412213032	
DRDYSDHPS(ph)GGSYR	ddPTM_K562_Methotrexat_30min_R1	2	DRDYSDHPSGGSYR	14	1	P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39	P38159;Q96E39	RBMX;RBMXL1	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1	1	DRDYSDHPS(0.741)GGS(0.259)YR;DRDYSDHPS(0.936)GGS(0.064)YR	117.2	0.00094792	13152500.0	3157.2	3413.8	4395.1	3320.1000000000004	3162.8	2811.0	2713.5	3763.9	3965.3	4170.2	True	False	3018.413268324537	3977.8724253215473	3472.628572595245	3029.0319877877905	3578.763637334195	3354.185966544049	3322.0714489225097	3631.521503601171	3780.954068500115	3414.9363699357914	0.8838856544730554	1.164845254611974	1.0168940783691787	0.8869951470998398	1.0479737393764337	0.9822103849645418	0.9728062514338949	1.063422889975971	1.1071814109881075	1.0	11.737642981879263	-9.2779596521658	22.567826425372473	1.063976662888227	0.9986827012101221	0.11357230611269231	0.07932504415229025	523.7369122683192	715449.0191992609	0.042453819626339664	0.02052220204937572	5.272788456307938e-10	9.2779596521658	-0.06529396167810486	
DRDYSDHPS(ph)GGSYRDSYESYGNSR	ddPTM_K562_Methotrexat_30min_R1	2	DRDYSDHPSGGSYRDSYESYGNSR	24	2	P38159;P38159-2;H3BUY5;Q96E39	P38159;Q96E39	RBMX;RBMXL1	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1	1	DRDYSDHPS(0.411)GGS(0.119)Y(0.345)RDS(0.059)Y(0.049)ES(0.009)Y(0.008)GNSR;DRDYSDHPS(0.357)GGS(0.357)Y(0.232)RDS(0.022)Y(0.02)ES(0.01)Y(0.003)GNSR	76.807	0.0037518	28199200.0	1059.03	740.47	1028.63	1071.51	835.5699999999999	817.6800000000001	744.03	943.67	877.97	1233.98	True	False	1012.4763092467177	862.8200816620323	812.7346200606686	977.5723819265982	945.4621008117273	975.6850875573596	910.8976672717218	910.480591222752	837.1533663332025	1010.4942644893215	1.0019614606703364	0.8538594547076227	0.8042941445802311	0.9674200203606685	0.9356432134620182	0.9655523260693086	0.9014377411949653	0.9010249965969733	0.8284592953689637	1.0	9.980845417744113	-6.240165269112138	23.629731428383987	0.9046389404939771	1.0019616695148574	0.18455746624141245	0.06015079720945535	4491.272122613296	4988418.181238613	0.015273811443751712	0.6224669272891558	5.752209975201606e-07	6.240165269112138	0.09732272902088035	
DRDYSDHPSGGSYRDS(ph)YESYGNSR	ddPTM_K562_Methotrexat_30min_R1	2	DRDYSDHPSGGSYRDSYESYGNSR	24	2	P38159;P38159-2;H3BUY5;Q96E39	P38159;Q96E39	RBMX;RBMXL1	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1	1	DRDYSDHPSGGS(0.005)Y(0.004)RDS(0.554)Y(0.428)ES(0.008)Y(0.002)GNSR;DRDYSDHPS(0.006)GGS(0.083)Y(0.012)RDS(0.495)Y(0.397)ES(0.006)Y(0.001)GNSR	122.47	4.4053e-09	36229000.0	3014.23	2969.1	4088.8	3380.3999999999996	2748.7	2684.9	2781.17	2884.68	2662.05	3582.4	True	False	2881.7280583370953	3459.693308929109	3230.616756758078	3084.0455804095814	3110.202229018748	3203.718926209222	3404.9181690067535	2783.224169347811	2538.291876541683	2933.5926458342456	0.9823204535330429	1.1793366450662248	1.101249268996366	1.051286239345119	1.0602024904293685	1.092080364585915	1.1606649525256338	0.9487425506400963	0.865250286247514	1.0	11.51845283916499	-9.368597049545672	6.1047305055604655	0.9255293319689673	1.0906907112768076	0.5691839452361684	0.060370386494510646	0.15930727314305526	7.7241400595818765	0.03258951245273468	0.015328868568814215	4.279597749385826e-10	9.368597049545672	0.16516137930784036	
DRDYSDHPSGGSYRDSYESYGNSR	ddPTM_K562_Methotrexat_30min_R1	4	DRDYSDHPSGGSYRDSYESYGNSR	24	2	P38159;P38159-2;H3BUY5;Q96E39	P38159;Q96E39	RBMX;RBMXL1	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1	0	;;;	66.041	0.0015321	237372000.0	4645.7	3913.7999999999997	5122.5	6731.599999999999	3578.17	3829.31	4462.83	3815.72	4085.8599999999997	5696.4	False	True	4441.480590604112	4560.488926774698	4047.3572531043988	6141.451079483236	4048.7620729101077	4569.269962129776	5463.733231765195	3681.518964829314	3895.9092604145676	4664.726760755415	0.9521416405287692	0.9776540322023413	0.8676515175883446	1.3165725227791643	0.8679526755934668	0.9795364651518881	1.1712868753067947	0.7892249972285883	0.8351848801072448	1.0	12.187576861462981	-9.28287165857207	24.906947337382082	0.8591537050189113	1.0156828763783563	0.18352199190132457	0.1380496862964712	1273.7700839557356	1480268.4064199894	0.07355850538171277	0.03538663180410737	5.213487557934459e-10	9.28287165857207	0.156529171359445	
DREEALHQFR	ddPTM_K562_Methotrexat_30min_R1	4	DREEALHQFR	10	1	A0A2R8Y5G6;A0A2R8Y4A4;A0A2R8YFS5;A0A2R8YFR4;A0A2R8YCW1;A0A0D9SFB3;A0A2R8Y645;A0A2U3TZJ9;A0A0D9SG12;A0A2R8YF78;F6S8Q4;O00571;A0A2R8YDT5;A0A0J9YVQ7;A0A0D9SF53;O00571-2;A0A2R8YDH3;A0A2R8Y7T2;O15523-2;O15523;A0A087WVZ1	A0A2R8Y5G6	DDX3X;DDX3Y	ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y	0	;;;	128.91	0.005167000000000001	67153300.0	7190.2	5503.599999999999	8318.6	7714.0	6037.6	5310.799999999999	5464.200000000001	6408.1	7370.5	8528.4	False	True	6874.127417302387	6412.976354795146	6572.639540395167	7037.725596757635	6831.650226624801	6337.036937432283	6689.685944795429	6182.723490854344	7027.847063748043	6983.824118114333	0.9842927457855905	0.9182614347577072	0.9411232913708905	1.0077180464071962	0.978210520637994	0.9073878193747116	0.9578829351449472	0.8852919813398322	1.006303558750789	1.0	12.769801510994936														
DREEDEEDAYERR	ddPTM_K562_Methotrexat_30min_R1	2	DREEDEEDAYERR	13	2	P49756	P49756	RBM25	RNA-binding protein 25	0	;	105.03	0.0085291	10370000.0	3198.5	2687.4	4698.1	3616.7	2917.2	2454.81	2654.3	3357.2000000000003	2917.8	3571.4	False	True	3057.8977697757623	3131.4471720104066	3712.033013335241	3299.6295262889994	3300.862932474803	2929.167290121663	3249.5943419476794	3239.1253731209254	2782.152114863853	2924.5848524264275	1.0455835354678562	1.0707321996188117	1.2692512615099865	1.1282386023272364	1.1286603395132102	1.0015668677526772	1.1111301281792534	1.1075504854760956	0.9512981346927231	1.0	11.51401613197247	-8.199274336161182	9.114741703701345	1.0458782211264117	1.1332509831143769	0.2946855913955858	0.07156101815457491	0.667781341166137	94.06619619255284	0.02448600323699261	0.02447655063451637	6.320124941152291e-09	8.199274336161182	0.08737276198796518	
DRELDLR	ddPTM_K562_Methotrexat_30min_R1	1	DRELDLR	7	1	H0YKK0;P09661	H0YKK0	SNRPA1	U2 small nuclear ribonucleoprotein A	0		82.241	0.021627	0.0	2450.1	1980.0	2584.7	2328.8	1913.9	1899.7	1893.2	2232.5	2547.5	2787.8	False	True	2342.396537666904	2307.161345754485	2042.2067920154097	2124.637719695253	2165.6113967035253	2266.7901389696663	2317.798292647909	2153.9817096069532	2429.0672810390242	2282.9024056656745	1.026060742611501	1.0106263588091218	0.8945659643386814	0.93067391511015	0.948621978464319	0.9929422008334561	1.0152857550527041	0.94352772341964	1.0640258974762127	1.0	11.156653470167894	-8.37242819395938	5.044494424214641	1.001297312279651	0.9594306048055935	0.17612110025311378	0.04438350870695262	0.45634732263386707	17.389783693496817	0.016744331243880316	0.014672626148022576	4.2420111532082914e-09	8.37242819395938	-0.04186670747405741	
DRELWVQR	ddPTM_K562_Methotrexat_30min_R1	2	DRELWVQR	8	1	Q9Y3C8	Q9Y3C8	UFC1	Ubiquitin-fold modifier-conjugating enzyme 1	0	;	140.35	8.4864e-06	10441500.0	3446.8	2649.4	3778.3	3620.8	2904.7	2680.8999999999996	3341.8	4022.5	4049.8	4747.799999999999	False	True	3295.2827990817877	3087.1683178999647	2985.2864635245196	3303.370085654661	3286.7189633756893	3198.9459828203303	4091.283717711168	3881.0263950252934	3861.5256819438064	3887.9274128773545	0.8475679839513861	0.7940395974664638	0.7678349275855401	0.8496480862048611	0.8453653101880505	0.8227895336278599	1.0523045528474295	0.9982250137105945	0.9932093045651773	1.0	11.924785568919713	-8.753211481763856	24.999995189660204	1.0107868055539564	0.8199374323206563	0.9153045435906336	0.02827208010385271	49.648851874985894	150855.62025565116	0.011600296362401941	0.0088300263733834	1.7651780495203447e-09	8.753211481763856	-0.1908493732333001	
DRGGSPS(ph)MSSAQVAT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	DRGGSPSMSSAQVATR	16	1	Q8IYX3-1;Q8IYX3-3;Q8IYX3	Q8IYX3-1	CCDC116	Coiled-coil domain-containing protein 116	2	DRGGS(0.019)PS(0.854)MS(0.057)S(0.07)AQVAT(1)R	93.152	0.016444999999999998	17876000.0	634.03	737.73	1242.6	783.55	652.65	595.55	519.28	507.86	587.55	775.86	True	False	606.1588003660862	859.6273432340685	981.795241133729	714.8573880398557	738.4849146029344	710.631608813699	635.7417586130389	489.99827594221165	560.2349287436618	635.3442357628849	0.9540635867078349	1.3530103758663636	1.5452965272516332	1.125149718532499	1.1623382617396443	1.118498553717755	1.0006256810525347	0.7712327402386044	0.8817817132958858	1.0	9.31139465987204	-8.573187281323703	1.2388297154524914	0.868916720100756	1.2664033357336335	0.48818431456297295	0.15398329056423424	0.3761989619812571	1.1776340445378686	0.09297850038087864	0.06343925292812398	2.6718539734453116e-09	8.573187281323703	0.39748661563287746	
DRIHSTYMY(ph)LAGS(ph)IGLT(ph)ALS(ph)AIAISR	ddPTM_K562_Methotrexat_30min_R1	1	DRIHSTYMYLAGSIGLTALSAIAISR	26	1	Q9H3K2	Q9H3K2	GHITM	Growth hormone-inducible transmembrane protein	4	DRIHS(0.199)T(0.199)Y(0.185)MY(0.582)LAGS(0.84)IGLT(0.98)ALS(0.94)AIAIS(0.074)R	50.055	0.011493000000000001	22367000.0	177.67	179.7	148.78	228.48	181.62	204.68	179.81	211.07	110.91	140.21	True	False	169.85983953605108	209.39237062226303	117.55311119899899	208.4495131380845	205.50621342248516	244.23151320961807	220.13696968150242	203.64654846438518	105.75381830816028	114.81661033732131	1.4794012733612107	1.8237114822244471	1.0238336670420602	1.8154996261052978	1.7898648359216112	2.1271444305147744	1.9172920105789482	1.7736680073213202	0.9210672392911153	1.0	6.843187559295343	-9.761859766528875	24.99999934869186	0.960533234284355	1.7249531150000057	0.5416333549847325	0.27897494274073514	8.81731702904129	524061.79972412036	0.23537766664891172	0.07501814717350348	1.730375006241413e-10	9.761859766528875	0.7644198807156507	
DRLEQLER	ddPTM_K562_Methotrexat_30min_R1	1	DRLEQLER	8	1	P21127;P21127-9;P21127-8;P21127-2;P21127-6;A0A0D9SER5;A0A0D9SEI3;P21127-3;A0A0D9SEN2;Q5QPR4;Q9UQ88;Q9UQ88-2;Q9UQ88-4;Q9UQ88-9;Q9UQ88-3;Q5QPR3;E7ESP2;J3KS35	P21127	CDK11B;CDK11A	Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A	0		112.11	0.02998	6092900.0	1961.3	1611.2	2029.0	1801.6	1429.9	1460.7	1315.3	1829.1	1890.0	2116.9	False	True	1875.083600394309	1877.4234142826392	1603.140627925588	1643.6565251644492	1617.9569131858364	1742.9596020387394	1610.2895068243147	1764.7695162562509	1802.1343125274816	1733.5088968195946	1.0816694415785557	1.083019197494215	0.9247951544216539	0.9481673432308342	0.933342145606661	1.005451777741945	0.9289190899329411	1.0180331462353662	1.0395875762932578	1.0	10.759479525508903	-6.745557615273263	24.991198427782397	0.9724572244931068	1.0823444206673964	0.5564593646617122	0.03836540045923217	177.09254844632386	278664.62687825976	0.010173446594246321	0.026726187824976808	1.7965627250413258e-07	6.745557615273263	0.10988719617428966	
DRQS(ph)PLHGNHITISHTQATGSR	ddPTM_K562_Methotrexat_30min_R1	2	DRQSPLHGNHITISHTQATGSR	22	1	Q86VQ1;H7C2L5	Q86VQ1	GLCCI1	Glucocorticoid-induced transcript 1 protein	1	DRQS(1)PLHGNHITISHTQATGSR;DRQS(1)PLHGNHITISHTQATGSR	84.946	0.00097408	29083000.0	2771.65	2299.53	3141.3	2949.3	2183.35	2393.14	2605.6800000000003	2663.7	2675.6499999999996	3095.8	True	False	2649.811584680004	2679.488247173138	2481.984058404459	2690.739448083651	2470.4987946040255	2855.5804354234165	3190.0700692936834	2570.016161200468	2551.259615510135	2535.120621084652	1.0452408310048307	1.0569470442107476	0.9790398286226482	1.0613851765887248	0.9745093681368983	1.1264081131578092	1.2583504085611559	1.0137648440968012	1.0063661643123623	1.0	11.307838676979722	-8.270316926418094	24.892042405567704	1.092923988815155	1.024929932398192	0.11474527692969749	0.07635124965814231	1268.472014567716	3556698.081352743	0.02795817627899441	0.02501266139524882	5.366400403515851e-09	8.270316926418094	-0.06799405641696299	
DRS(ph)SPPPGYIPDELHQVAR	ddPTM_K562_Methotrexat_30min_R1	3	DRSSPPPGYIPDELHQVAR	19	1	Q9Y2U5	Q9Y2U5	MAP3K2	Mitogen-activated protein kinase kinase kinase 2	1	DRS(0.523)S(0.476)PPPGY(0.001)IPDELHQVAR;DRS(0.765)S(0.233)PPPGY(0.001)IPDELHQVAR;DRS(0.5)S(0.5)PPPGYIPDELHQVAR	142.72	1.2777e-09	162275000.0	3792.3999999999996	3488.0	4837.2	3937.4	3164.2	3239.29	3719.9	3965.8599999999997	3871.3	4315.3	True	False	3625.6906368915425	4064.332714137195	3821.9378242492135	3592.214255207871	3580.347761873294	3865.2369475512182	4554.182267494695	3826.3784559291526	3691.3241079828786	3533.757353888044	1.0260157316410954	1.150144819554569	1.0815507239182953	1.0165424208471783	1.0131843823215505	1.0938037223462618	1.28876485038904	1.0828073556661015	1.0445890134254607	1.0	11.786987265026786	-8.520440042258942	24.998889086819794	1.1224185207740112	1.0608770080827539	0.053527655382784145	0.08008462254653098	236.61788631358522	2425610.013791835	0.031030037271367387	0.024437756789718178	3.0168933500736825e-09	8.520440042258942	-0.061541512691257294	
DRS(ph)SSAPNVHINTIEPVNIDDLIR	ddPTM_K562_Methotrexat_30min_R1	5	DRSSSAPNVHINTIEPVNIDDLIR	24	1	H7C560;P15056;A0A2R8Y679;A0A2R8Y492;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0	H7C560	BRAF	Serine/threonine-protein kinase B-raf	1	DRS(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR;DRS(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR;DRS(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR;DRS(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR;DRS(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR	121.46	1.3580999999999999e-09	174325000.0	11361.02	9426.460000000001	13151.03	11991.44	10106.1	9963.859999999999	9168.689999999999	12536.470000000001	12003.810000000001	13481.6	True	False	10861.603164101238	10984.022292576177	10390.808522458467	10940.16907311166	11435.229289004386	11889.234928712058	11225.002127518463	12095.555244361161	11445.755493153712	11039.951600624992	0.9838451794921222	0.9949339172786185	0.9412005503602229	0.9909616879563418	1.0358042954062423	1.0769281749422692	1.016761896572354	1.095616691261256	1.036757760107005	1.0	13.430446226874647	-7.750676323725844	3.397769850143794	1.0499148873351793	0.9743817964715171	0.5602701027762707	0.02876289217568669	0.15777428560519807	3.817693300294799	0.008631232134056616	0.01076743660587352	1.775512263275863e-08	7.750676323725844	-0.07553309086366222	
DRSWVIGS(ph)PEILR	ddPTM_K562_Methotrexat_30min_R1	2	DRSWVIGSPEILR	13	1	Q6P0Q8-2;Q6P0Q8;A0A669KBJ4;E7ERL6	Q6P0Q8-2	MAST2	Microtubule-associated serine/threonine-protein kinase 2	1	DRS(0.015)WVIGS(0.985)PEILR;DRS(0.007)WVIGS(0.993)PEILR	82.663	0.022793	11645900.0	3131.1000000000004	2548.8	3920.3999999999996	3526.7	2517.6000000000004	2478.7	3049.3	3213.8	2925.6000000000004	3824.0	True	False	2993.460593073282	2969.945877807591	3097.5616154359163	3217.5196865549838	2848.7085283143324	2957.6736945118246	3733.1831469317926	3100.768832400821	2789.589494566347	3131.4365446823786	0.9559384488108503	0.9484292066690537	0.9891823037883406	1.0274899844350307	0.9097129983846685	0.9445101800112706	1.192163115446572	0.9902065036784361	0.8908337929770489	1.0	11.612608929180503														
DRT(ph)WAEAARLALEKHPNS(ph)PMTAK	ddPTM_K562_Methotrexat_30min_R1	1	DRTWAEAARLALEKHPNSPMTAK	23	3	K7ELG8;K7EMU6;K7EJ76;Q9C0F0-2;Q9C0F0	K7ELG8	ASXL3	Putative Polycomb group protein ASXL3	2	DRT(1)WAEAARLALEKHPNS(0.962)PMT(0.038)AK	49.089	0.017897999999999997	7825400.0	1973.1	1113.9	3035.7	2395.1	1124.4	1052.3	1029.8	1338.2	1070.4	2927.2	True	False	1886.36488652323	1297.9530419373336	2398.548055295074	2185.125301632644	1272.278308403493	1255.6420820328362	1260.7588642345315	1291.1347475010202	1020.6373376346118	2397.0557148520547	0.7869507891849964	0.541478044876167	1.0006225722805577	0.9115871976165181	0.5307670992044577	0.5238268239878329	0.5259614352820101	0.5386335993365546	0.42578790776984715	1.0	11.22704772665148	-7.772772898876089	24.970203584285642	0.5611675848242296	0.8045726044251477	0.2476178598689649	0.1828617978178482	271.75957509784297	598743.2920686294	0.055288337153828075	0.06324089438438409	1.6874351877575214e-08	7.772772898876089	0.2434050196009181	
DS(ph)GVVGARPRASPPPQGPLPGPPGALHR	ddPTM_K562_Methotrexat_30min_R1	1	DSGVVGARPRASPPPQGPLPGPPGALHR	28	2	A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74	A0A087WXV6	OTUD5	OTU domain-containing protein 5	1	DS(0.5)GVVGARPRAS(0.5)PPPQGPLPGPPGALHR	64.547	0.00041779	30636000.0	2016.9	1533.5	2390.4	2533.4	1706.1	1818.8	1573.6	1889.1	1885.5	2423.3	True	False	1928.2394909678715	1786.8848099568193	1888.6877067488035	2311.3007553572447	1930.4820543998555	2170.2573589293193	1926.519857020257	1822.6592822479276	1797.8435165452727	1984.4168877428895	0.9716907283333417	0.900458376963952	0.951759541261025	1.1647254010149846	0.9728208151844644	1.093649914155794	0.9708241594393577	0.9184860769457834	0.9059807582015548	1.0	10.954499424650573	-11.497286687726836	17.968245003704855	0.999999999705977	0.985997399984298	0.0029304647591280597	0.07974389616707223	0.0	0.0	0.0816179307331786	0.019795255844543606	3.1820962536918515e-12	11.497286687726836	-0.014002599721678943	
DS(ph)SGSVSPNTLSQEEGDQICLYHIR	ddPTM_K562_Methotrexat_30min_R1	1	DSSGSVSPNTLSQEEGDQICLYHIR	25	0	H7C4T3;H7C4L8;G5E9U9;Q9H0J9	H7C4T3	PARP12	Poly [ADP-ribose] polymerase 12	1	DS(0.528)S(0.181)GS(0.019)VS(0.216)PNT(0.044)LS(0.012)QEEGDQICLYHIR	75.939	0.00062671	27935000.0	1743.3	1033.5	1812.2	1767.3	1398.8	1339.4	1376.0	1743.0	1677.8	2028.9	True	False	1666.6666193684803	1204.2683085036667	1431.8439851782905	1612.3635529102621	1582.766718067241	1598.2200937705804	1684.6030269826335	1681.6977020581955	1599.7994442109039	1661.4465495570287	1.0031418824835763	0.7248312073745292	0.8618056268858277	0.9704576733691175	0.9526437780915883	0.9619449353918093	1.013937539809378	1.0121888678913964	0.9628955229630703	1.0	10.698224165456466	-7.263468833768919	4.400288189655254	0.9827203294518057	0.8475903175551611	0.40314252288185115	0.06571919045841151	0.17558144138866555	8.929136785804987	0.01779229549127263	0.0293988935525893	5.451690171943262e-08	7.263468833768919	-0.13513001189664453	
DS(ph)SMLISLTY(ph)DVILVILCT(ph)VY(ph)AFKTR	ddPTM_K562_Methotrexat_30min_R1	1	DSSMLISLTYDVILVILCTVYAFKTR	26	1	Q14832	Q14832	GRM3	Metabotropic glutamate receptor 3	4	DS(0.317)S(0.317)MLIS(0.317)LT(0.4)Y(0.649)DVILVILCT(0.699)VY(0.671)AFKT(0.63)R	43.768	0.01644	22132000.0	1283.4	1130.2	1137.7	1355.3	1336.5	1367.9	1664.3	1426.9	1229.7	1118.7	True	False	1226.983272699769	1316.9463398847058	898.91231759041	1236.4829532389965	1512.2731760772576	1632.2273154164372	2037.561640848254	1376.7151182253815	1172.5315154047855	916.0925895753603	1.3393660058624828	1.4375690349107122	0.9812461402041098	1.3497357879645635	1.6507863869723551	1.7817274519959052	2.2241874500837655	1.5028121981245752	1.2799268641047443	1.0	9.83934960880719	-7.68813615484832	4.51088305151347	1.6418832016810008	1.2569975897956993	0.15300144618362987	0.3222310520958839	0.32880141017964476	12.646486319901246	0.09985787248683729	0.12845912912559748	2.050519223609805e-08	7.68813615484832	-0.38488561188530146	
DSAIPVES(ph)DT(ph)DDEGAPR	ddPTM_K562_Methotrexat_30min_R1	2	DSAIPVESDTDDEGAPR	17	0	C9JA08;Q96D46	C9JA08	NMD3	60S ribosomal export protein NMD3	2	DSAIPVES(1)DT(1)DDEGAPR;DSAIPVES(1)DT(1)DDEGAPR	151.11	2.041e-09	61146000.0	10149.2	8127.200000000001	10487.4	10456.8	8211.2	7390.1	7495.5	9129.2	9509.3	11755.7	True	False	9703.05332030894	9470.08166122013	8286.238058800793	9540.068579229357	9291.116725331518	8818.13223456321	9176.556677869421	8808.120861520181	9067.21471858072	9626.628814937938	1.0079388648757717	0.9837381126116664	0.8607621856098555	0.9910082504090879	0.9651474990823583	0.916014567932633	0.9532471703520836	0.9149746012697973	0.9418888889234872	1.0	13.23281494841397	-6.537970725681847	24.999672735143147	0.9404673930084777	1.0018887387899562	0.24454033233342742	0.03809239786941455	246.69880309129218	408652.9726802894	0.009237161831428668	0.024457754895623185	2.8975388943888894e-07	6.537970725681847	0.06142134578147851	
DSAIPVES(ph)DTDDEGAPR	ddPTM_K562_Methotrexat_30min_R1	2	DSAIPVESDTDDEGAPR	17	0	C9JA08;Q96D46	C9JA08	NMD3	60S ribosomal export protein NMD3	1	DSAIPVES(0.819)DT(0.181)DDEGAPR;DSAIPVES(0.976)DT(0.024)DDEGAPR	211.45	1.6555000000000002e-22	158301000.0	14037.1	12657.6	16733.1	16205.0	10972.400000000001	10495.7	11503.1	12818.599999999999	13627.8	14661.3	True	False	13420.04589154895	14749.05325758686	13221.050981341366	14784.332809885596	12415.462923449384	12523.845481699183	14082.96299395635	12367.762572348356	12994.24655251958	12005.996499098272	1.117778594434613	1.2284738929163115	1.101203967728489	1.2314123872180036	1.0341051593994606	1.0431325282028698	1.1729940946604533	1.0301321155038863	1.0823130386132906	1.0	13.551467531942714	-7.771855242675175	24.99901022564068	1.0667144717326087	1.169020318474191	0.4582312102340276	0.057965100423451765	195.34932271605976	468854.3587913707	0.017174449737966977	0.01968224016688059	1.6910044766653803e-08	7.771855242675175	0.10230584674158227	
DSALAEAPEGLS(ph)PAPPAR	ddPTM_K562_Methotrexat_30min_R1	4	DSALAEAPEGLSPAPPAR	18	0	Q9H9J4-2;Q9H9J4;C9JPC9	Q9H9J4-2	USP42	Ubiquitin carboxyl-terminal hydrolase 42	1	DSALAEAPEGLS(1)PAPPAR;DSALAEAPEGLS(1)PAPPAR;DSALAEAPEGLS(1)PAPPAR;DSALAEAPEGLS(1)PAPPAR	302.9	3.9117999999999984e-202	201136000.0	13428.5	11296.099999999999	15887.2	13042.7	11745.900000000001	10731.0	10350.0	14135.900000000001	14732.800000000001	15589.400000000001	True	False	12838.19921883189	13162.588524129911	12552.693831433908	11899.266741098112	13290.691731302557	12804.61387655076	12671.250966039428	13638.732384695608	14047.875343706284	12766.00859562539	1.0056549094938914	1.0310653032648294	0.9832904104212666	0.9321054934253852	1.041100014287705	1.003024068222749	0.9925773487557863	1.0683630895696936	1.1004124929478867	1.0	13.6400199038534	-9.261813051394782	24.984554879544323	1.0632908475528824	0.9983476116578931	0.34557028025446446	0.0360984633834993	34.83179879218751	2328741.841912553	0.018299157931409845	0.009680437989477562	5.47251484847918e-10	9.261813051394782	-0.06494323589498929	
DSALAEAPEGLS(ph)PAPPARSEEPCEQPLLVHPSGDHAR	ddPTM_K562_Methotrexat_30min_R1	1	DSALAEAPEGLSPAPPARSEEPCEQPLLVHPSGDHAR	37	1	Q9H9J4-2;Q9H9J4;C9JPC9	Q9H9J4-2	USP42	Ubiquitin carboxyl-terminal hydrolase 42	1	DSALAEAPEGLS(0.978)PAPPARS(0.021)EEPCEQPLLVHPSGDHAR	62.958	0.00024002	17492000.0	852.09	757.78	1171.4	783.72	771.68	542.25	673.84	669.92	798.52	782.99	True	False	814.633143863758	882.99026494234	925.5391481281579	715.0124844037973	873.1694459523361	647.0321381567094	824.9657730392277	646.3585338857293	761.3969794917693	641.1829236717722	1.2705159694502044	1.3771269201709921	1.443486895795669	1.115145862446298	1.361810200671096	1.0091225362825345	1.2866309169854557	1.0080719713873831	1.1874879248679677	1.0	9.324592193149115	-8.169921230139696	0.4247316973834404	1.0324513419676067	1.3996442445854849	0.4321388395793778	0.11905247053764738	1.2659199813906616	0.4660595256578313	0.11187262582759833	0.19008860495591237	6.762056105936193e-09	8.169921230139696	0.3671929026178782	
DSALQDTDDS(ph)DDDPVLIPGAR	ddPTM_K562_Methotrexat_30min_R1	1	DSALQDTDDSDDDPVLIPGAR	21	0	Q58WW2;Q58WW2-2;Q58WW2-4;Q58WW2-3	Q58WW2	DCAF6	DDB1- and CUL4-associated factor 6	1	DSALQDT(0.015)DDS(0.985)DDDPVLIPGAR	115.63	1.9598e-05	6509500.0	289.11	222.54	330.11	164.82	329.4	234.37	192.07	344.49	194.67	303.35	True	False	276.40107057053956	259.3109524667692	260.824422220067	150.37048649955838	372.7218736998494	279.65868551367106	235.1465867678448	332.3740914412093	185.61983419033052	248.4103754783996	1.1126792511715111	1.0438813272890748	1.049973946208003	0.6053309416322418	1.5004279631317543	1.1257930952968132	0.9466053352843624	1.3380040620328708	0.7472306011085716	1.0	7.956581622345309	-5.893803062387425	15.900933520370273	1.0527772241332831	4.037502560027385	0.00544048486113502	0.2438828952443502	15464635.637808606	19860720.9143136	0.058648302801475496	1641862329.384644	1.277017761173213e-06	5.893803062387425	2.984725335894102	
DSAPSTPT(ph)SPTEFLTPGLR	ddPTM_K562_Methotrexat_30min_R1	1	DSAPSTPTSPTEFLTPGLR	19	0	Q9NZJ4-2;Q9NZJ4	Q9NZJ4-2	SACS	Sacsin	1	DSAPS(0.019)T(0.019)PT(0.573)S(0.371)PT(0.018)EFLTPGLR	198.98	2.3751000000000004e-16	22077000.0	1406.6	1311.2	1574.9	1393.5	1187.6	1435.0	1237.4	1666.8	1237.1	1610.3	True	False	1344.767548215284	1527.853513410748	1244.3500122819162	1271.3340185483235	1343.790216168612	1712.2934407651046	1514.918448828715	1608.1776992487662	1179.5874910199723	1318.659065873964	1.0197992665556932	1.1586417998029968	0.9436480167504113	0.9641112334868186	1.0190581105799261	1.2985111050142841	1.1488325436299767	1.2195553353155153	0.8945356093526573	1.0	10.364855894321922														
DSAYISSS(ph)PLGSHQVFDFR	ddPTM_K562_Methotrexat_30min_R1	1	DSAYISSSPLGSHQVFDFR	19	0	Q9HCD6;Q9HCD6-2	Q9HCD6	TANC2	Protein TANC2	1	DSAYIS(0.021)S(0.246)S(0.733)PLGSHQVFDFR	91.565	0.0017101	8293900.0	1173.4	900.01	1085.2	1071.6	822.32	949.89	713.22	1132.2	1498.7	1402.1	True	False	1121.8187409894888	1048.7213549457044	857.43135013546	977.654491766332	930.4694935666665	1133.4427989187218	873.1777404829606	1092.3798842629305	1429.0257641190142	1148.1661033732125	0.9770526561389354	0.9133881864868262	0.7467833683788443	0.8514922090924543	0.8103962404333552	0.9871766773019731	0.7604977519521262	0.9514127625381146	1.244615879114233	1.0	10.165115654182705	-9.564681232166185	6.840055836766667	1.1181997855401025	0.8628135474955047	0.5434160415479217	0.09376108481915532	0.1443330356289955	17.50402457094767	0.061404753681762056	0.022998302462740598	2.7247004773760116e-10	9.564681232166185	-0.2553862380445978	
DSAYQSITHYRPVS(ph)ASR	ddPTM_K562_Methotrexat_30min_R1	2	DSAYQSITHYRPVSASR	17	1	P50402;Q5HY57	P50402	EMD	Emerin	1	DSAYQSITHY(0.003)RPVS(0.498)AS(0.498)R;DSAYQSITHY(0.024)RPVS(0.704)AS(0.272)R	85.397	0.007519800000000001	412190000.0	2043.3799999999999	1738.21	1929.06	2401.32	1720.01	1554.8600000000001	1809.9699999999998	1833.56	2181.0	2289.8599999999997	True	False	1953.5554618741282	2025.4196579817683	1524.1766681646782	2190.800003889818	1946.2214632133516	1855.3146894132626	2215.901846473662	1769.0726555282986	2079.6057860436167	1875.144164802927	1.0418161432827444	1.0801407678404475	0.8128317261008384	1.1683368377812517	1.0379049780515914	0.9894250928745266	1.1817234578902618	0.9434328777138177	1.1090378143070285	1.0	10.872785801791068														
DSENLASPS(ph)EYPENGER	ddPTM_K562_Methotrexat_30min_R1	3	DSENLASPSEYPENGER	17	0	P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3	P52948-6	NUP98	Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96	1	DSENLAS(0.013)PS(0.987)EYPENGER;DSENLAS(0.001)PS(0.999)EYPENGER;DSENLAS(0.147)PS(0.853)EYPENGER	189.44	1.6734999999999998e-11	243880000.0	5468.59	4249.86	5696.499999999999	4292.759999999999	4090.67	3288.44	3404.23	5104.62	4776.21	5816.320000000001	True	False	5228.197331504781	4952.077129731389	4500.882497278516	3916.420395739861	4628.664805973778	3923.884489442235	4167.7152344077695	4925.087621273843	4554.165039596234	4762.928086706859	1.0976855489581019	1.0397127648331363	0.9449822494360766	0.8222715784163176	0.971810768861322	0.8238387013219114	0.8750321563828971	1.0340461857947352	0.9561691792716178	1.0	12.217633050929713	-6.6885073817748	2.9867184760556076	0.9205865649452392	1.0871460368407213	0.4247479926199492	0.06671971950139617	0.23932686308058146	4.1524455249954295	0.01833682516455167	0.06032054305475541	2.0487672264277525e-07	6.6885073817748	0.16655947189548215	
DSESS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	2	DSESSSPR	8	0	Q6UB98-2;Q6UB98	Q6UB98-2	ANKRD12	Ankyrin repeat domain-containing protein 12	1	DS(0.001)ES(0.004)S(0.79)S(0.205)PR;DS(0.002)ES(0.002)S(0.727)S(0.269)PR	90.601	0.020857	2860500.0	0.0	368.92	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	429.8777594321942	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
DSFDDRGPSLNPVLDYDHGS(ph)RSQESGYYDR	ddPTM_K562_Methotrexat_30min_R1	1	DSFDDRGPSLNPVLDYDHGSRSQESGYYDR	30	2	D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991	D6REM6	MATR3	Matrin-3	1	DSFDDRGPSLNPVLDY(0.304)DHGS(0.32)RS(0.264)QES(0.044)GY(0.034)Y(0.034)DR	47.24100000000001	0.006543300000000001	14503000.0	673.21	515.94	631.11	651.4	729.34	747.15	521.41	808.49	726.72	907.02	True	False	643.6164944788932	601.1903155194791	498.648635628446	594.2927733637442	825.2609938198183	891.5261632527173	638.3494653335861	780.054948443506	692.9349458200905	742.7498887964989	0.8665319297748604	0.8094115187194532	0.6713547092365401	0.8001250250292135	1.1110886804130187	1.200304674157926	0.8594406743943427	1.0502256011205247	0.9329317395696618	1.0	9.536732673837095	-7.710454131113009	8.164502089456716	1.0284401230209783	0.7790408723980937	0.5876668435707513	0.09791900576361391	0.18765041494489737	26.64789398119383	0.03010038857365378	0.038729076048459	1.947806760615623e-08	7.710454131113009	-0.2493992506228846	
DSFDDRGPSLNPVLDYDHGSR	ddPTM_K562_Methotrexat_30min_R1	4	DSFDDRGPSLNPVLDYDHGSR	21	1	D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991	D6REM6	MATR3	Matrin-3	0	;;;	106.57	0.00022250000000000001	207667000.0	17830.399999999998	15769.5	22861.9	20612.800000000003	16574.0	15409.9	15206.300000000001	18957.1	18903.399999999998	22876.4	False	True	17046.59696551812	18375.141839330987	18063.499616348938	18805.70782743659	18753.771507897083	18387.645082122785	18616.699861341574	18290.368048013428	18024.58506001691	18733.26228315167	0.9099641433435487	0.9808831778252114	0.9642474088773579	1.0038672145401004	1.001094802626228	0.9815506132458451	0.9937777830658502	0.9763578693105379	0.9621701115148464	1.0	14.193314537533972	-5.433892457398259	1.3325892373230581	0.9866897805148814	0.4716922311821094	0.7192196364918071	0.014043437350398286	5.680264528420882	1.6940659731073804	0.00412490820805937	6.729365001832119	3.682201432321918e-06	5.433892457398259	-0.5149975493327721	
DSFDDRGPSLNPVLDYDHGSRS(ph)QESGYYDR	ddPTM_K562_Methotrexat_30min_R1	1	DSFDDRGPSLNPVLDYDHGSRSQESGYYDR	30	2	D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991	D6REM6	MATR3	Matrin-3	1	DSFDDRGPSLNPVLDY(0.121)DHGS(0.221)RS(0.635)QES(0.019)GY(0.004)YDR	94.295	1.2789e-06	60473000.0	601.5	501.59	988.2	712.98	567.63	605.62	599.09	607.08	737.73	905.2	True	False	575.0587802157636	584.4692219277736	780.7903245520287	650.4741503728623	642.2832943784014	722.6474937952361	733.4511827289431	585.7286523037804	703.4330933232264	741.25950843266	0.7757860420997285	0.7884812474966989	1.053329253344694	0.8775255399397751	0.8664756230061227	0.9748913647303119	0.9894661375471229	0.7901802886040027	0.9489700777135193	1.0	9.533834895579286	-6.635877039865592	10.52262603118713	0.9285534512406277	0.779086916115869	0.4200986544862998	0.07250457403600054	0.300279895167749	26.111507487761738	0.01822665348884138	0.04829644608932439	2.3127194889070536e-07	6.635877039865592	-0.14946653512475871	
DSFSHS(ph)PGAVSSLK	ddPTM_K562_Methotrexat_30min_R1	5	DSFSHSPGAVSSLK	14	0	Q9H6R7;Q9H6R7-3	Q9H6R7	C2orf44	WD repeat and coiled-coil-containing protein C2orf44	1	DS(0.031)FS(0.155)HS(0.814)PGAVSSLK;DS(0.004)FS(0.309)HS(0.687)PGAVSSLK;DS(0.004)FS(0.026)HS(0.97)PGAVSSLK;DSFS(0.006)HS(0.994)PGAVSSLK;DS(0.035)FS(0.112)HS(0.852)PGAVSSLK	105.19	0.0023703	236161000.0	27223.8	19896.8	40508.9	28695.600000000002	20572.800000000003	18264.4	17457.1	25074.4	24919.1	31931.199999999997	True	False	26027.074348857725	23184.408012226188	32006.63547687275	26179.90130079316	23278.483798580037	21793.736808021033	21372.29905693206	24192.519139694785	23760.616480054774	26148.15026034571	0.995369618489932	0.8866557588735404	1.2240496998141996	1.0012142748198753	0.8902535577777527	0.8334714536604049	0.8173541472011372	0.925209580747412	0.9086920582710707	1.0	14.67442127230795	-7.716623697046084	4.7387782973671655	0.8845330207125929	1.0337435104908086	0.3325930046212884	0.09072556788536854	0.22408295813733134	11.000597076438149	0.028022872499359208	0.035588095179060794	1.92033192920016e-08	7.716623697046084	0.14921048977821572	
DSGCYISSGNS(ph)DNGKEDLESENLSDMVHK	ddPTM_K562_Methotrexat_30min_R1	1	DSGCYISSGNSDNGKEDLESENLSDMVHK	29	1	Q9NSI8;A0A2R8Y4K8;Q9NSI8-3;S6FRS6;Q9NSI8-2	Q9NSI8	SAMSN1	SAM domain-containing protein SAMSN-1	1	DS(0.001)GCY(0.001)IS(0.048)S(0.135)GNS(0.81)DNGKEDLES(0.005)ENLSDMVHK	64.273	0.00022337	49277000.0	1492.8	1047.5	3090.0	2021.7	875.91	967.92	803.34	1060.9	1288.4	2383.3	True	False	1427.1782994282494	1220.5815705443547	2441.451227348479	1844.4606998917443	991.1075178883879	1154.9568412441533	983.5094445466784	1023.5875456761563	1228.5025652171464	1951.661275350814	0.7312633177966356	0.6254064606190197	1.2509605320265549	0.9450721409432074	0.5078276289056536	0.591781399688093	0.5039344977370067	0.5244698752821054	0.6294650515091669	1.0	10.93048696933759	-7.757134462889228	24.98874551852556	0.5946310466659256	0.8953196365088876	0.2763395732743893	0.20370376700827278	131.06684608641868	760798.1178102765	0.06164117780183804	0.07679194143717907	1.7493049985254863e-08	7.757134462889228	0.300688589842962	
DSGNWDTSGSELS(ph)EGELEKR	ddPTM_K562_Methotrexat_30min_R1	1	DSGNWDTSGSELSEGELEKR	20	1	O75400-3;O75400;O75400-2	O75400-3	PRPF40A	Pre-mRNA-processing factor 40 homolog A	1	DSGNWDTSGS(0.002)ELS(0.998)EGELEKR	75.483	0.0051664	27533000.0	718.36	554.72	1312.7	696.59	469.48	614.77	571.47	793.0	847.7	1242.9	True	False	686.7817545399769	646.3780513721855	1037.182209106909	635.5210362257459	531.2248490121593	733.5656017973266	699.6366946437254	765.1097405233216	808.2906120262151	1017.7987660527534	0.6747716517710736	0.6350745087646168	1.0190444749007987	0.6244073557786238	0.5219350491771233	0.7207373660338131	0.6874017909817967	0.7517298763198396	0.7941556219024937	1.0	9.991236632012756	-10.199809937792635	1.2945369471230834	0.9992793963162533	0.699164218415289	0.3616475463220703	0.12057993229202844	0.8848921446762869	2.8895683625861475	0.11994032828964897	0.0362968340931372	6.31233533553003e-11	10.199809937792635	-0.3001151779009643	
DSGRLS(ph)PDLSVCGQPR	ddPTM_K562_Methotrexat_30min_R1	4	DSGRLSPDLSVCGQPR	16	1	Q8TF76-2;Q8TF76	Q8TF76-2	GSG2	Serine/threonine-protein kinase haspin	1	DS(0.204)GRLS(0.796)PDLSVCGQPR;DS(0.025)GRLS(0.975)PDLSVCGQPR;DS(0.006)GRLS(0.982)PDLS(0.012)VCGQPR;DS(0.113)GRLS(0.887)PDLSVCGQPR	151.49	3.7882e-10	72262000.0	4208.099999999999	3465.04	5256.24	4355.2	3925.02	3435.0	3624.34	4658.719999999999	4276.5599999999995	5184.200000000001	True	False	4023.116962636669	4037.5789643904627	4153.027054769635	3973.3863778842174	4441.22892747232	4098.765135211248	4437.190504952209	4494.870177012365	4077.7436590383736	4245.291144074895	0.947665737425733	0.9510723357632765	0.9782667227820093	0.9359514443266931	1.046154145086349	0.9654850506382462	1.0452028740467296	1.0587896152389467	0.9605333346170226	1.0	12.051647782541627	-7.7541965795231516	24.99927987879345	1.014898631038624	0.9548719798918532	0.44779933778052783	0.03226856629439871	155.1752499952197	535600.631058826	0.009386939902289525	0.011874904953342284	1.7611786841448304e-08	7.7541965795231516	-0.06002665114677086	
DSGS(ph)QEVLSELR	ddPTM_K562_Methotrexat_30min_R1	1	DSGSQEVLSELR	12	0	X6RJY0;Q9BVJ6-2;Q9BVJ6-3;Q9BVJ6	X6RJY0	UTP14A	U3 small nucleolar RNA-associated protein 14 homolog A	1	DS(0.021)GS(0.97)QEVLS(0.008)ELR	115.26	0.00017814	0.0	557.02	632.74	850.61	659.55	495.76	441.46	511.71	681.39	698.94	484.64	True	False	532.5340677569155	737.2895302589359	672.0785852734269	601.7282755174357	560.9611296461363	526.7658971150967	626.4739934137232	657.4251274844718	666.4464319565916	396.86699974238184	1.3418451725706577	1.8577748483434815	1.6934604935902786	1.5161962972684435	1.4134738590265072	1.3273109063163127	1.5785489693534258	1.656537650928966	1.6792689550635396	1.0	8.632511794220402	-7.382902236414946	4.850909629149254	1.4757098120242835	1.6525378782381177	0.11629650975320982	0.21853191546760364	0.5069163701868822	17.8977055387593	0.0615355619035586	0.09262089496235214	4.140928803519001e-08	7.382902236414946	0.17682806621383418	
DSGVVGARPRAS(ph)PPPQGPLPGPPGALHR	ddPTM_K562_Methotrexat_30min_R1	1	DSGVVGARPRASPPPQGPLPGPPGALHR	28	2	A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74	A0A087WXV6	OTUD5	OTU domain-containing protein 5	1	DS(0.189)GVVGARPRAS(0.811)PPPQGPLPGPPGALHR	83.115	0.00015291	29880000.0	1531.0	1326.1	1870.3	2232.0	1442.3	1150.3	1268.7	1473.4	1591.3	2193.9	True	False	1463.6990731676387	1545.2154851540517	1477.749589161768	2036.3240254035568	1631.9877305321575	1372.5791950606979	1553.2382705907469	1421.5796868689295	1517.3208103306772	1796.5634506743393	0.8147216134327123	0.8600951358406271	0.822542387026239	1.133455111000518	0.9083941510218254	0.7640026265398536	0.8645607646129835	0.7912771944321477	0.8445684508171151	1.0	10.81102417372145	-8.046290674118438	24.2268541299866	0.8400811695229262	0.9135581112495843	0.05983684756746055	0.10179817625740616	724.2619440328759	379050.12264073483	0.034283552816765143	0.03428512151459638	8.988957475236222e-09	8.046290674118438	0.07347694172665808	
DSIS(ph)SDSETSEPLSCR	ddPTM_K562_Methotrexat_30min_R1	1	DSISSDSETSEPLSCR	16	0	O75164	O75164	KDM4A	Lysine-specific demethylase 4A	1	DS(0.002)IS(0.57)S(0.426)DS(0.001)ETSEPLSCR	142.1	1.0011e-06	7238600.0	910.14	732.33	1356.5	839.78	929.18	988.72	578.53	800.0	926.01	851.7	True	False	870.1313353708646	853.3350850183749	1071.7891876693245	766.1577912425629	1051.383456601172	1179.7761468663946	708.2800793606561	771.8635465556837	882.9599972188216	697.4488768582592	1.2475915644032205	1.2235091536204397	1.5367279570329593	1.0985146247475674	1.507470284183771	1.6915593185565594	1.0155297439881006	1.1066955187205034	1.2659852593013257	1.0	9.44594366075794	-8.802765075050141	24.999917672558492	1.105943765498706	1.376471041260573	0.39319993437305834	0.17447175808094983	173.7453352627123	105105.38709866296	0.07477157498487404	0.05041151773219842	1.5748345167185227e-09	8.802765075050141	0.27052727576186686	
DSITPDIATKPGQPLFLDSIS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	DSITPDIATKPGQPLFLDSISPK	23	1	Q2TB10	Q2TB10	ZNF800	Zinc finger protein 800	1	DSITPDIATKPGQPLFLDS(0.105)IS(0.895)PK	106.38	7.4036e-06	7347700.0	1378.4	602.94	2039.7	1390.5	627.89	681.16	675.29	1064.8	803.41	1597.5	True	False	1317.807186449558	702.5655867723282	1611.594844149739	1268.5970238905225	710.4685406114097	812.7845296944665	826.7409724499287	1027.3503804656145	766.0596444591027	1308.1772699084997	1.007361323853098	0.537056867546299	1.2319391883811448	0.9697439735971366	0.543098062436984	0.6213106957219312	0.631979313100093	0.7853296369669169	0.5855931471066491	1.0	10.353342337034112	-7.747925622456949	24.969821121929645	0.6770276051674519	0.9290929217389176	0.25682568909251713	0.20016449894586522	314.38899210180864	580904.5785045052	0.0580452017859509	0.0745107297180344	1.7867935560256226e-08	7.747925622456949	0.2520653165714657	
DSIVAELDREMSR	ddPTM_K562_Methotrexat_30min_R1	1	DSIVAELDREMSR	13	1	M0QXB4;O14579-3;O14579	M0QXB4	COPE	Coatomer subunit epsilon	0		108.68	0.0071941999999999996	4560800.0	1850.5	1322.8	2107.5	2001.3	1293.6	1710.1	1470.8	1802.7	2130.7	2015.8	False	True	1769.154235726136	1541.3702162444604	1665.16455069156	1825.8491362186996	1463.731074129099	2040.5526223361728	1800.6643401788208	1739.2980192199132	2031.644222064712	1650.7190864986244	1.0717476099938523	0.9337568268589501	1.008751013004627	1.1060931876007731	0.8867232990162186	1.2361598281779322	1.0908363239430692	1.0536608157292078	1.2307631496368507	1.0	10.688878913091747	-8.262793885902864	24.99990086752099	1.1236723384764926	1.003878716046262	0.3156014358082342	0.0889475986224565	152.17094741081445	2808571.0244513773	0.029098787696462045	0.027076930841409948	5.460169366515939e-09	8.262793885902864	-0.1197936224302305	
DSLGDFIEHYAQLGPS(ph)SPEQLAAGAEEGGGPR	ddPTM_K562_Methotrexat_30min_R1	2	DSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPR	32	0	Q96QR8	Q96QR8	PURB	Transcriptional activator protein Pur-beta	1	DSLGDFIEHY(0.007)AQLGPS(0.566)S(0.427)PEQLAAGAEEGGGPR;DSLGDFIEHYAQLGPS(0.58)S(0.42)PEQLAAGAEEGGGPR	73.87	2.6723000000000002e-06	64123000.0	2550.0	2136.5	2926.8999999999996	2913.0	2298.7	2345.7	1909.1399999999999	2946.3	2916.3	3564.0	True	False	2437.9050532837873	2489.5203107093225	2312.583688455101	2657.621812724265	2601.019341450649	2798.973326831155	2337.3132434110635	2842.676959021262	2780.7218495364505	2918.525064133893	0.8353209239980485	0.853006315177258	0.7923809587502678	0.9106044163828163	0.8912102121084686	0.9590369331509523	0.8008542644141002	0.9740114943521515	0.9527832684081001	1.0	11.511023742721678	-8.377214795832495	0.2038583844989913	1.0295259166711264	0.7614335086101911	0.5125191689174098	0.04919576709255793	4.134167771865908	0.455693277070573	0.16157007604438997	0.3521183595475661	4.195514285388677e-09	8.377214795832495	-0.26809240806093526	
DSLGDFIEHYAQLGPS(ph)SPEQLAAGAEEGGGPRR	ddPTM_K562_Methotrexat_30min_R1	2	DSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRR	33	1	Q96QR8	Q96QR8	PURB	Transcriptional activator protein Pur-beta	1	DSLGDFIEHYAQLGPS(0.5)S(0.5)PEQLAAGAEEGGGPRR;DSLGDFIEHYAQLGPS(0.5)S(0.5)PEQLAAGAEEGGGPRR	118.9	5.2909e-19	47770000.0	3600.5	3144.78	4582.8	3661.1000000000004	3119.9	2795.09	2487.52	3727.8	4216.4	4241.2	True	False	3442.2263311169713	3664.4014428796913	3620.9329076675117	3340.1370472244466	3530.2215353860342	3335.2015842147334	3045.4096814533714	3596.6911610628476	4020.3804843073367	3473.077581931725	0.9911170280286126	1.055087701450525	1.0425718465101346	0.9617225554076633	1.016453405403782	0.9603014921307041	0.8768619789251915	1.0355919429425382	1.157584415972419	1.0	11.761998922798744	-9.523392213415192	24.999998255954203	1.0847242243236765	0.987890675660033	0.28755695979160234	0.058814807981494736	23.068731609792735	1122816.088072047	0.0397229250141515	0.015327554031898224	2.996455183719155e-10	9.523392213415192	-0.09683354866364358	
DSLGDFIEHYAQLGPSS(ph)PEQLAAGAEEGGGPR	ddPTM_K562_Methotrexat_30min_R1	2	DSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPR	32	0	Q96QR8	Q96QR8	PURB	Transcriptional activator protein Pur-beta	1	DSLGDFIEHYAQLGPS(0.348)S(0.652)PEQLAAGAEEGGGPR;DSLGDFIEHYAQLGPS(0.474)S(0.526)PEQLAAGAEEGGGPR	134.14	1.0590000000000001e-24	100357000.0	3353.6000000000004	2845.3	3878.0	3258.4	2648.7	2807.2	2385.5	4138.9	3566.6	4418.2	True	False	3206.179759487259	3315.4374631693117	3064.0607960056327	2972.7411309923627	2997.0504762258383	3349.6516703246016	2920.5090994673474	3993.3325410491493	3400.789544476464	3618.0211667666545	0.8861694312177149	0.9163676248285316	0.8468885765927998	0.8216483525023254	0.8283673140873955	0.9258242326199853	0.8072117228870006	1.1037338802022274	0.9399584435034344	1.0	11.820985132947376	-9.254175668687893	24.997954402918133	1.0163846234045943	0.8629433785332408	0.6417655083116363	0.05229864355437677	327.82223056720727	1128200.364971156	0.02431745178327057	0.013658476715076065	5.56960417272624e-10	9.254175668687893	-0.15344124487135358	
DSLGS(ph)S(ph)ASSS(ph)S(ph)MDPDK	ddPTM_K562_Methotrexat_30min_R1	1	DSLGSSASSSSMDPDK	16	0	H0Y3R3;A8MZG2	H0Y3R3	C16orf90	Uncharacterized protein C16orf90	4	DS(0.488)LGS(0.695)S(0.7)AS(0.423)S(0.423)S(0.652)S(0.619)MDPDK	42.958	0.032779	26024000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
DSLITPHVS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	DSLITPHVSR	10	0	F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;J3KQ37;J3KNE0;Q7Z3J3;A6NKT7;Q99666;O14715;H7BZ48;P49792	F8VYC4;P49792	RGPD1;RGPD2;RGPD8;RGPD3;RGPD4;RGPD5;RGPD6;RANBP2	RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;E3 SUMO-protein ligase RanBP2	1	DSLITPHVS(1)R	81.23899999999999	0.020319	11150000.0	4019.2	3298.0	4080.6	3839.5	3361.5	3634.3	3095.2	4157.5	4368.1	5034.3	True	False	3842.5207804541938	3842.9384435849975	3224.1378246984505	3502.8969962083147	3803.5961701337083	4336.577039562803	3789.377390346402	4011.278368506565	4165.0279844186725	4122.539486635595	0.9320761615287949	0.9321774736283291	0.7820756684442749	0.8496939829355109	0.9226342603786251	1.0519188606006258	0.9191852261526581	0.9730115094131385	1.0103063895253925	1.0	12.009317596857402	-8.011911169400845	6.349929809687741	0.9852534433079627	0.8729355225747806	0.542787001780024	0.050618474669256806	0.13225342288194197	23.428981990875148	0.017210397384236027	0.01827083064422312	9.72946209856781e-09	8.011911169400845	-0.11231792073318214	
DSLLDGHFVLATLSDTDSHSQDLGS(ph)PER	ddPTM_K562_Methotrexat_30min_R1	4	DSLLDGHFVLATLSDTDSHSQDLGSPER	28	0	Q99638	Q99638	RAD9A	Cell cycle checkpoint control protein RAD9A	1	DSLLDGHFVLATLSDT(0.001)DS(0.004)HS(0.175)QDLGS(0.819)PER;DSLLDGHFVLATLSDTDS(0.009)HS(0.27)QDLGS(0.72)PER;DSLLDGHFVLAT(0.003)LS(0.015)DT(0.297)DS(0.062)HS(0.167)QDLGS(0.455)PER;DSLLDGHFVLATLSDT(0.002)DS(0.004)HS(0.037)QDLGS(0.956)PER	110.44	6.6337e-12	29533200.0	7482.799999999999	6068.0	7657.700000000001	6883.400000000001	5862.6	6014.400000000001	6241.54	8941.5	9228.7	10738.300000000001	True	False	7153.865071651731	7070.63386163546	6050.453418662281	6279.94300916794	6633.634659237206	7176.597679538433	7641.364227495052	8627.022376909552	8799.659751334586	8793.489813745504	0.8135410653992229	0.8040759711329887	0.6880605478389868	0.71415821729292	0.7543802062371039	0.8161262287835219	0.8689797099156796	0.9810692409541728	1.0007016483466482	1.0	13.10222011644724	-8.980245214108033	1.4192537084922727	1.0065098715419896	0.7520842610870113	0.8925693486733585	0.036025896005932714	0.1428054608767477	0.5557258783585458	0.028048344492039926	0.01351109256058101	1.0465374785635032e-09	8.980245214108033	-0.25442561045497825	
DSLLQDGEFSMDLR	ddPTM_K562_Methotrexat_30min_R1	2	DSLLQDGEFSMDLR	14	0	K7EJ44;P07737	K7EJ44	PFN1	Profilin-1	0	;	249.98	7.0984e-74	27485000.0	1932.83	1338.23	2372.0	2075.2	1667.88	1853.96	1794.56	2277.06	2819.2	2857.6000000000004	False	True	1847.8651075052942	1559.3497614793046	1874.1496152979269	1893.2704379558531	1887.2354544824054	2212.2115313176837	2197.0357617020018	2196.974509150106	2688.136007342578	2340.0609492898466	0.7896653751972049	0.6663714301768637	0.8008977782679922	0.8090688571724665	0.8064898715801129	0.9453649196569166	0.9388797169444456	0.9388535413220053	1.1487461504617493	1.0	11.192330391433616	-8.41562571382302	0.6934361845564924	1.0507021806166055	0.7316007430974242	0.7877607273964891	0.05973425407645013	0.31287260732871414	0.32118455479585567	0.045434523336061294	0.039935285123741164	3.840380768242109e-09	8.41562571382302	-0.3191014375191813	
DSLS(ph)PVLHPSDLILTR	ddPTM_K562_Methotrexat_30min_R1	5	DSLSPVLHPSDLILTR	16	0	Q9HCN4-3;Q9HCN4-2;Q9HCN4-4;Q9HCN4;Q9HCN4-5	Q9HCN4-3	GPN1	GPN-loop GTPase 1	1	DS(0.046)LS(0.954)PVLHPSDLILTR;DS(0.082)LS(0.918)PVLHPSDLILTR;DS(0.023)LS(0.977)PVLHPSDLILTR;DS(0.031)LS(0.969)PVLHPSDLILTR;DS(0.058)LS(0.942)PVLHPSDLILTR	104.68	0.00083962	142410400.0	18848.5	15301.0	22694.300000000003	18895.8	17120.7	15353.300000000001	14846.900000000001	19715.7	18510.9	20812.699999999997	True	False	18019.942508556658	17829.23017746937	17931.07656595941	17239.234551622103	19372.372140415926	18320.10793316997	18176.695262578836	19022.287656034856	17650.332299346534	17043.318350813537	1.05730246526179	1.0461126061532682	1.0520883431778119	1.0114951910640815	1.1366549483886872	1.0749143773574754	1.0664997794699527	1.1161140843870263	1.0356159484930363	1.0	14.05691863660262	-7.722243025366487	24.99997496906052	1.0773465858882059	1.042799815535381	0.12069292719276992	0.03762378328667945	285.7320029061782	182242.63681363765	0.0105036748859857	0.01355999052321025	1.895644846929029e-08	7.722243025366487	-0.03454677035282483	
DSNAPKS(ph)PLTGYVR	ddPTM_K562_Methotrexat_30min_R1	1	DSNAPKSPLTGYVR	14	1	H0YNS8;H0YKM5;Q9NP66	H0YNS8	HMG20A	High mobility group protein 20A	1	DSNAPKS(0.98)PLT(0.019)GYVR	97.823	0.012168	23040000.0	1432.9	1158.4	1931.4	1332.7	1002.4	825.12	884.52	1132.7	1199.5	1763.7	True	False	1369.9114317060153	1349.805910566665	1526.0255341426716	1215.8642601502338	1134.2331699961412	984.5627622606996	1082.8961260368312	1092.8622989795285	1143.735506813076	1444.2768393975718	0.9485102816420047	0.9345894594070262	1.0566018179583896	0.8418498635326644	0.785329473585719	0.6816994743690376	0.749784318696492	0.7566847775772523	0.7919087778837083	1.0	10.496131589591808	-7.469188435779466	4.336581076030115	0.7762459778787668	0.9747350229891175	0.48902847076304456	0.08352198934640165	0.1634438739786344	6.377342854254668	0.023335857541772316	0.034293668852235885	3.39477944743267e-08	7.469188435779466	0.1984890451103507	
DSPLQGSGQQNS(ph)QAGQRNSTSSIEPR	ddPTM_K562_Methotrexat_30min_R1	2	DSPLQGSGQQNSQAGQRNSTSSIEPR	26	1	C9J840;A0A0D9SG62;G5E948;A0A0D9SEY1;O95819-2;O95819-3;O95819-6	C9J840	MAP4K4	Mitogen-activated protein kinase kinase kinase kinase 4	1	DSPLQGS(0.013)GQQNS(0.566)QAGQRNS(0.283)T(0.084)S(0.037)S(0.017)IEPR;DSPLQGS(0.059)GQQNS(0.719)QAGQRNS(0.202)T(0.014)S(0.004)S(0.001)IEPR	62.193000000000005	0.0023851	34308200.0	2625.6	2175.05	3270.5	2791.0	2027.56	1951.6	2067.3999999999996	2650.9	2411.13	2643.3	True	False	2510.18176780467	2534.440042971359	2584.0667440269267	2546.3173633070464	2294.2196789279474	2328.7190794405437	2531.0670770231795	2557.666344455577	2299.0370925737493	2164.5727558993035	1.1596661562719235	1.1708731139038977	1.1937999020750578	1.176360256945552	1.0598949250725371	1.0758331283131406	1.1693148544557055	1.1816033152431307	1.062120497593799	1.0	11.079866578079557	-15.999999999984816	0.12668435937705236	0.5298778134312874	1.2026781584992383	0.5085369384163576	0.04547610136818135	138.81110644799608	1.1180730348037142	16.56675738038402	0.4137298668516296	1.0000000000349632e-16	15.999999999984816	0.672800345067951	
DSPLQGSGQQNSQAGQRNS(ph)TSSIEPR	ddPTM_K562_Methotrexat_30min_R1	1	DSPLQGSGQQNSQAGQRNSTSSIEPR	26	1	C9J840;A0A0D9SG62;G5E948;A0A0D9SEY1;O95819-2;O95819-3;O95819-6	C9J840	MAP4K4	Mitogen-activated protein kinase kinase kinase kinase 4	1	DSPLQGS(0.003)GQQNS(0.046)QAGQRNS(0.897)T(0.033)S(0.015)S(0.006)IEPR	63.461999999999996	0.0018399999999999998	27263000.0	3183.2	3363.6	4578.2	3734.5	3125.0	2644.6	2687.7	3805.2	3983.8	4258.6	True	False	3043.270339456061	3919.3777285756473	3617.298384804793	3407.1021831852977	3535.992274778474	3155.6315215661302	3290.4851421665862	3671.3689591921075	3798.5940075380827	3487.3262733222787	0.8726657906192476	1.1238918934997628	1.0372698455194138	0.9769955307162718	1.0139551041806687	0.9048856557261125	0.9435552868507002	1.0527747252322612	1.0892568431571699	1.0	11.76790563325719	-9.294755535769495	21.48240928160134	1.0532620477343937	0.9875636807655888	0.1530206535692763	0.06926103344876994	239.8995083710428	154683.62630811898	0.03850717052018575	0.01850327776975893	5.072761735253246e-10	9.294755535769495	-0.06569836696880493	
DSQDASAEQS(ph)DHDDEVASLASASGGFGTK	ddPTM_K562_Methotrexat_30min_R1	3	DSQDASAEQSDHDDEVASLASASGGFGTK	29	0	Q6P2E9-2;Q6P2E9	Q6P2E9-2	EDC4	Enhancer of mRNA-decapping protein 4	1	DS(0.001)QDAS(0.104)AEQS(0.894)DHDDEVAS(0.001)LASASGGFGTK;DS(0.074)QDAS(0.386)AEQS(0.537)DHDDEVAS(0.002)LASASGGFGTK;DS(0.042)QDAS(0.337)AEQS(0.591)DHDDEVAS(0.026)LAS(0.003)AS(0.001)GGFGTK	69.85600000000001	0.00014692	341171000.0	8240.4	5777.099999999999	11193.5	7802.699999999999	5629.2	5200.4	4680.09	7522.700000000001	6664.0	8774.2	True	False	7878.161882776362	6731.667581090015	8844.137318228217	7118.649405473265	6369.538468218556	6205.3036998988555	5729.719317261014	7258.122377093049	6354.192094541343	7185.107356263639	1.0964570871593937	0.9368917188442095	1.2308984236009102	0.9907505973821755	0.8864917603027728	0.8636340965023108	0.797443800511361	1.0101619944155404	0.8843559016556735	1.0	12.810793997530094	-7.538980313540684	5.71878648153952	0.9021356122934917	1.07924100258325	0.4567516732538922	0.08829158677246196	0.14694223063874529	16.08385937484493	0.025631466771524607	0.034455647287704685	2.8908109191252947e-08	7.538980313540684	0.17710539028975825	
DSQDASAEQS(ph)DHDDEVASLASASGGFGTKVPAPR	ddPTM_K562_Methotrexat_30min_R1	1	DSQDASAEQSDHDDEVASLASASGGFGTKVPAPR	34	1	Q6P2E9-2;Q6P2E9	Q6P2E9-2	EDC4	Enhancer of mRNA-decapping protein 4	1	DS(0.003)QDAS(0.043)AEQS(0.931)DHDDEVAS(0.023)LASASGGFGTKVPAPR	82.226	1.8821000000000002e-06	58286000.0	1469.5	879.6	1263.5	1807.0	536.17	601.56	816.93	885.83	1111.5	1791.6	True	False	1404.9025395296173	1024.938949356386	998.3086167491281	1648.583115548489	606.6857529497518	717.8029562555104	1000.1473479890425	854.6748568067765	1059.8266076054472	1467.1238790410446	0.9575895802663256	0.6986042310389743	0.6804528445148422	1.1236836500991665	0.4135204679146109	0.48925858716490084	0.68170613421054	0.582551254884773	0.7223838577954175	1.0	10.518774977168091	-3.0000060515777274	0.6165359218969548	0.6672035908758759	19.0529189930095	0.09309097046086123	0.20538384560882272	419.0680145330507	3.0635957144945922	0.09085001750120356	10427.491515650056	0.0009999860658244173	3.0000060515777274	18.385715402133624	
DSQQTEFTQNAAT(ph)GLNISRDETVLQEEAR	ddPTM_K562_Methotrexat_30min_R1	1	DSQQTEFTQNAATGLNISRDETVLQEEAR	29	1	O75113	O75113	N4BP1	NEDD4-binding protein 1	1	DSQQT(0.001)EFT(0.016)QNAAT(0.789)GLNIS(0.18)RDET(0.016)VLQEEAR	54.732	0.02868	11517000.0	241.79	208.61	349.33	348.26	138.18	267.35	185.85	280.95	260.08	334.83	True	False	231.16120111117127	243.07925673628435	276.0104068769074	317.7285865085317	156.35309200924456	319.01160375508783	227.53159343366463	271.068829256024	247.98893756727375	274.1890424309626	0.843072352788769	0.8865389170228737	1.0066427324367033	1.1587938879378514	0.5702382948020701	1.163473204205128	0.8298347425424714	0.9886202119994484	0.9044451060793732	1.0	8.099027106820431	-15.999999999999996	0.2071740171742971	1.3151561524792563	0.9213717147711287	0.01761434464455469	0.16297166442960098	930.7890869156511	9.262687376460192	122.3078245446416	0.3456402608186137	1.0000000000000082e-16	15.999999999999996	-0.39378443770812765	
DSSDS(ph)ADGRATPSENLVPSSAR	ddPTM_K562_Methotrexat_30min_R1	3	DSSDSADGRATPSENLVPSSAR	22	1	Q8N684-2;Q8N684;Q8N684-3;F5H6M0;F5H047;F5H669	Q8N684-2	CPSF7	Cleavage and polyadenylation specificity factor subunit 7	1	DS(0.004)S(0.009)DS(0.944)ADGRAT(0.036)PS(0.003)ENLVPS(0.002)S(0.002)AR;DS(0.011)S(0.193)DS(0.786)ADGRAT(0.011)PSENLVPSSAR;DS(0.019)S(0.065)DS(0.431)ADGRAT(0.426)PS(0.051)ENLVPS(0.004)S(0.005)AR	99.31299999999999	4.042e-05	277656000.0	5318.2	4249.88	5043.31	4613.47	3994.7599999999998	3863.1499999999996	3973.13	5139.74	5952.6	6745.6	True	False	5084.418295832875	4952.100434391448	3984.7881519090165	4209.0142479742635	4520.140959870097	4609.649063199802	4864.20554113046	4958.972430967637	5675.86492526512	5523.906473799546	0.920438881423643	0.8964852062357985	0.7213714009839368	0.7619633438650798	0.8182870186723088	0.8344907874642411	0.8805734789685316	0.8977292527468651	1.027509236839242	1.0	12.431473177949607	-9.441632319521156	1.3917320228841692	1.0168808037770987	0.8210660434750152	0.6096304890452744	0.056985541017782526	0.3155846189169724	1.0746180022456584	0.055197057723422614	0.019075850392044298	3.617159674218051e-10	9.441632319521156	-0.19581476030208345	
DSSGSVS(ph)PNTLSQEEGDQICLYHIR	ddPTM_K562_Methotrexat_30min_R1	2	DSSGSVSPNTLSQEEGDQICLYHIR	25	0	H7C4T3;H7C4L8;G5E9U9;Q9H0J9	H7C4T3	PARP12	Poly [ADP-ribose] polymerase 12	1	DS(0.012)S(0.049)GS(0.049)VS(0.868)PNT(0.023)LSQEEGDQICLYHIR;DS(0.001)S(0.003)GS(0.022)VS(0.971)PNT(0.002)LSQEEGDQICLYHIR	199.87	1.0740999999999998e-34	50493000.0	2410.86	2174.96	3224.5	2582.58	2256.12	2002.96	1895.12	2985.2799999999997	2610.3500000000004	3370.2000000000003	True	False	2304.8814810822564	2534.3351720010983	2547.721515399732	2356.169221114122	2552.8393251114276	2390.0036725539194	2320.1489015227667	2880.2860103271887	2488.9953982572015	2759.824122094287	0.8351552052285136	0.918295898536434	0.9231463320446663	0.8537389039581798	0.9250007290950883	0.8659985444073407	0.8406872318233549	1.0436483931235043	0.9018673973935819	1.0	11.430360614612159	-9.253632719840887	24.999803811168622	0.9795684227988655	0.8835480363241249	0.5135210149917102	0.0451999952734756	468.58047711044475	1500573.1505280396	0.0206681212416416	0.01165213408417151	5.576571567812747e-10	9.253632719840887	-0.09602038647474054	
DSSGSVSPNT(ph)LSQEEGDQICLYHIR	ddPTM_K562_Methotrexat_30min_R1	1	DSSGSVSPNTLSQEEGDQICLYHIR	25	0	H7C4T3;H7C4L8;G5E9U9;Q9H0J9	H7C4T3	PARP12	Poly [ADP-ribose] polymerase 12	1	DS(0.193)S(0.193)GS(0.011)VS(0.193)PNT(0.408)LS(0.002)QEEGDQICLYHIR	128.67	7.4261e-12	19585000.0	975.49	670.15	1095.3	857.19	748.24	658.41	760.6	799.28	745.8	881.13	True	False	932.6086276187451	780.8808968976607	865.4114981601258	782.0414835733312	846.6466750976786	785.6384141701411	931.1839115719408	771.1688693637836	711.1279207846535	721.5488186757285	1.2925093957334426	1.0822287788244536	1.1993803825338265	1.0838372447322775	1.1733740714197889	1.088822258225074	1.2905348709196967	1.0687688059404266	0.9855575982922393	1.0	9.494953197905923	-9.50589378544876	9.725235303826752	1.0039483764101544	1.164996722921309	0.5030180304499687	0.07270927285321267	0.25312381436893017	142.35419897756745	0.03988432585604402	0.017741334280573506	3.1196524580973007e-10	9.50589378544876	0.16104834651115452	
DSSSLSSCTSGILEERS(ph)PAFRGPDR	ddPTM_K562_Methotrexat_30min_R1	1	DSSSLSSCTSGILEERSPAFRGPDR	25	2	Q9H3Q1-2;Q9H3Q1	Q9H3Q1-2	CDC42EP4	Cdc42 effector protein 4	1	DSSSLSSCTSGILEERS(1)PAFRGPDR	84.10700000000001	0.00030037	17135000.0	796.04	632.53	1061.5	928.82	975.02	628.97	733.29	870.2	751.0	1001.7	True	False	761.0470347513829	737.0448313283256	838.7056562557967	847.3917926860805	1103.2522200814426	750.5095508278945	897.7489488779765	839.5945727659447	716.08617391965	820.2824233285405	0.9277865928946857	0.8985256911120275	1.0224596217147972	1.0330488239008409	1.3449663051472782	0.9149404272036918	1.094438846117283	1.0235432930027188	0.8729751528917526	1.0	9.679976905096664	-6.849174203441918	4.085025416817028	1.0497368321562068	0.9124942822634395	0.1468513932921668	0.11943223187013711	0.37821626177523116	11.677659633049958	0.03213877352062294	0.0747811131315624	1.4152259931182596e-07	6.849174203441918	-0.1372425498927673	
DSSSSLTDPQVSYVKS(ph)PAAERR	ddPTM_K562_Methotrexat_30min_R1	2	DSSSSLTDPQVSYVKSPAAERR	22	2	H7C3M7;O94887-3;O94887-2;O94887	H7C3M7	FARP2	FERM, RhoGEF and pleckstrin domain-containing protein 2	1	DSSSSLTDPQVS(0.014)Y(0.358)VKS(0.628)PAAERR;DSSSSLTDPQVS(0.06)Y(0.054)VKS(0.886)PAAERR	65.085	0.005899100000000001	81463000.0	4068.8	2830.8	4806.2	4532.2	2986.55	2994.2	2539.03	3885.9	3872.7	4799.7	True	False	3889.9404238435563	3298.5415846271703	3797.444300609145	4134.869062694445	3379.3336730366887	3572.7867737553142	3108.472110174214	3749.230694450912	3692.6590222884543	3930.427819956071	0.9896989849535089	0.8392321995787311	0.9661656375746872	1.0520150100964478	0.8597877452115272	0.9090070947531728	0.7908737299261627	0.9538988797643957	0.9395056190930701	1.0	11.940470640437699	-5.880248421227115	18.529895799856963	0.9203569184982558	12.473664310438796	0.06647961696267057	0.07376422429864317	794.0201425636982	122923.24732527815	0.01807005024367591	187.40665178046274	1.317502896805673e-06	5.880248421227115	11.55330739194054	
DSSSTNLESMDT(ph)S	ddPTM_K562_Methotrexat_30min_R1	1	DSSSTNLESMDTS	13	0	Q86VP6;Q86VP6-2;A0A0C4DGH5	Q86VP6	CAND1	Cullin-associated NEDD8-dissociated protein 1	1	DSSSTNLESMDT(0.607)S(0.393)	145.31	2.9698e-07	3971200.0	1775.0	1505.7	1589.9	2059.3	1394.7	1147.0	1261.8	1656.4	1803.2	1913.4	True	False	1696.9731253249888	1754.4913324760232	1256.2017172690444	1878.7643662695093	1578.1274962027317	1368.6415167648606	1544.790769946721	1598.1434731435422	1719.3696255817733	1566.864718774912	1.083037421795932	1.1197465304138134	0.8017295317308782	1.19905971699871	1.0071880981764818	0.8734905447580461	0.985912026377459	1.0199626387612366	1.0973312532852872	1.0	10.61366490928581														
DSTAPQRVPVAS(ph)PSAHNISSSGGAPDR	ddPTM_K562_Methotrexat_30min_R1	3	DSTAPQRVPVASPSAHNISSSGGAPDR	27	1	Q7KZI7-10;Q7KZI7-13;Q7KZI7-7;Q7KZI7-2;Q7KZI7-15;Q7KZI7-5;Q7KZI7-4;Q7KZI7-16;Q7KZI7-9	Q7KZI7-10	MARK2	Serine/threonine-protein kinase MARK2	1	DS(0.001)T(0.001)APQRVPVAS(0.904)PS(0.091)AHNIS(0.001)S(0.001)S(0.001)GGAPDR;DSTAPQRVPVAS(0.772)PS(0.223)AHNIS(0.001)S(0.001)S(0.002)GGAPDR;DS(0.004)T(0.013)APQRVPVAS(0.789)PS(0.193)AHNISSSGGAPDR	93.104	1.8091e-05	56459000.0	2725.43	2551.25	4007.6	3213.77	2537.9300000000003	2524.42	2695.75	2823.83	2958.61	3980.58	True	False	2605.6233605377374	2972.8006986647133	3166.4595270944233	2932.023773799817	2871.7122796571316	3012.228437446861	3300.3405595846175	2724.5142983379205	2821.0648668713907	3259.6583893911566	0.7993547326977473	0.9119976216955596	0.9714083958613402	0.899488051675091	0.8809856545101077	0.9240932875820429	1.0124805011242481	0.8358281675175199	0.8654480101512456	1.0	11.670505063303997	-6.26673526225744	5.3556602632519725	0.9200193570875808	0.7949244632451364	0.31514042361349404	0.05442869159685616	0.1843272681833219	19.352204951892986	0.01367899100748462	0.08459708233639296	5.410840570932748e-07	6.26673526225744	-0.12509489384244432	
DSTHLICAFANT(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	DSTHLICAFANTPK	14	0	F5H8D7;P18887	F5H8D7	XRCC1	DNA repair protein XRCC1	1	DSTHLICAFANT(1)PK	82.90799999999999	0.019885	0.0	1597.5	1142.4	1882.5	1783.1	1286.2	1052.1	1347.3	1435.8	1670.5	1672.8	True	False	1527.2758127924903	1331.1621825201632	1487.3889758846312	1626.7783914413462	1455.3578444224236	1255.4034348633918	1649.4663214053066	1385.3021001808124	1592.8388196175429	1369.8397102365811	1.1149303100059196	0.9717649244452564	1.085812423723465	1.187568428104913	1.0624292999734055	0.9164600978362458	1.2041308987315253	1.0112877366809294	1.1627921191906812	1.0	10.419791372901972														
DSYS(ph)SSRSDLYSSGR	ddPTM_K562_Methotrexat_30min_R1	2	DSYSSSRSDLYSSGR	15	1	P38159;P38159-2;H3BUY5	P38159	RBMX	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed	1	DSYS(0.981)S(0.008)S(0.003)RS(0.007)DLYSSGR;DSYS(0.604)S(0.005)S(0.016)RS(0.339)DLYS(0.034)S(0.001)GR	152.94	8.1339e-09	92728000.0	5714.6	4814.6	5387.299999999999	6370.9	4525.6	3829.3999999999996	3983.6	4169.4	4689.0	6046.8	True	False	5463.393026468832	5610.1308157927	4256.579351810506	5812.373088460358	5120.795724395984	4569.377353356025	4877.023705151175	4022.759838761583	4471.009413461034	4951.665925309997	1.103344431728156	1.132978456223595	0.8596257130460643	1.173821735176223	1.034156140910374	0.9227959685244641	0.984925836822453	0.8124053398270684	0.9029303432220396	1.0	12.273698268003303	-8.229654172608157	3.8713670141957985	0.915154156770905	1.0621284207325912	0.3590431356003533	0.09118304894391245	0.25524590214802134	8.455617712276986	0.03183850768269435	0.030566685855135958	5.893127365293511e-09	8.229654172608157	0.14697426396168622	
DSYSSSRSDLY(ph)SSGR	ddPTM_K562_Methotrexat_30min_R1	1	DSYSSSRSDLYSSGR	15	1	P38159;P38159-2;H3BUY5	P38159	RBMX	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed	1	DS(0.002)Y(0.044)S(0.354)S(0.005)S(0.005)RS(0.024)DLY(0.56)S(0.004)S(0.001)GR	107.34	0.0013949000000000001	45512000.0	2616.4	2616.6	3439.9	2967.1	2762.6	2255.8	2306.2	2540.8	2894.9	3367.4	True	False	2501.3861887889034	3048.94867540464	2717.9119990148974	2706.978949719934	3125.930322656963	2691.701424165801	2823.424055833828	2451.438623860851	2760.316730865506	2757.531229226842	0.9071107381403051	1.1056805606003983	0.985632354842613	0.9816675586585898	1.1335974329231489	0.9761272676213724	1.0238955867148822	0.8889975924400271	1.0010101432793004	1.0	11.429161509189742	-9.137520642454332	21.68490748471727	0.9582678477211601	1.0201520225258633	0.11024557126420886	0.06779049328259108	10.86841983595178	1852.7324724371479	0.0302733776856172	0.01747832268625722	7.285835433802504e-10	9.137520642454332	0.06188417480470321	
DSYVGDEAQSKR	ddPTM_K562_Methotrexat_30min_R1	3	DSYVGDEAQSKR	12	1	P60709;P63261;A0A2R8Y793;I3L3I0;P68133;P62736;P68032;I3L1U9;P63267;J3KT65;I3L3R2;E7EVS6;B8ZZJ2;F6QUT6;C9JFL5;K7EM38;G5E9R0;A6NL76;F8WB63;A0A2R8YGF8;C9JUM1;C9JZR7;F6UVQ4;C9JTX5	P60709	ACTB;ACTG1;ACTA1;ACTA2;ACTC1;ACTG2	Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle	0	;;	124.6	0.00091028	192394000.0	7220.3	5362.6	10725.5	9067.7	5566.900000000001	5676.7	5155.1	6524.799999999999	7253.1	9416.6	False	True	6902.904257343104	6248.678501385351	8474.364122629811	8272.748819512468	6299.044926228567	6773.641933931204	6311.262401452163	6295.319085708155	6915.904964123318	7711.162491280366	0.8951833481850208	0.8103419566701177	1.0989736154843655	1.0728277129248842	0.8168735820768147	0.8784203343647222	0.8184579703240357	0.816390407130803	0.8968693075711592	1.0	12.912732653749519	-7.784647444899425	24.99708171968391	0.8597151712527804	0.9672354676011293	0.20772413867933737	0.09226945752139012	361.4573962683004	389318.49817148887	0.030144838657416715	0.03420229403358	1.641922125206241e-08	7.784647444899425	0.10752029634834892	
DT(ph)SPSSGSAVSSSK	ddPTM_K562_Methotrexat_30min_R1	2	DTSPSSGSAVSSSK	14	0	F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8-7;Q8NEY8-5;Q8NEY8-6;Q8NEY8-9;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8	F8WF16	PPHLN1	Periphilin-1	1	DT(0.498)S(0.498)PS(0.002)S(0.001)GSAVSSSK;DT(0.5)S(0.5)PSSGSAVSSSK	219.97	1.8809e-26	66614000.0	8394.1	5827.0	13016.2	8759.099999999999	6071.4	5707.3	5179.0	7098.8	7262.9	10907.900000000001	True	False	8025.1054148115445	6789.812707935043	10284.277496897497	7991.203302380059	6869.895519068805	6810.154950856229	6340.5225848423415	6849.131180361857	6925.249364262351	8932.373610287905	0.8984292154516007	0.7601353239540768	1.1513487842752714	0.8946337951175879	0.7691007809118473	0.762412685359757	0.7098362497443697	0.7667761649012684	0.7752977726196049	1.0	13.124827880027249	-7.680883773813341	4.994450587047609	0.7795340596735781	0.9341724177140766	0.2258136779583979	0.11542134838197939	0.2756969070174527	12.106516159166157	0.03416777284135549	0.04404682021298851	2.0850488106280607e-08	7.680883773813341	0.1546383580404984	
DTDSEEEIREAFR	ddPTM_K562_Methotrexat_30min_R1	3	DTDSEEEIREAFR	13	1	G3V361;A0A590UJI2;Q96HY3;P0DP25;P0DP24;P0DP23;E7EMB3;A0A590UJC0;G3V226	G3V361	CALM1;CALM2		0	;;	126.66	0.0020176	193896000.0	5447.9	4724.8	6615.499999999999	5624.5	5214.5	5044.9	4949.799999999999	6127.0	6471.2	6560.1	False	True	5208.41683913127	5505.49289213171	5226.996956156594	5131.4088175996	5900.298149386347	6019.755525655669	6059.91865040599	5911.509937183344	6170.355324459175	5372.002321331301	0.9695485086537544	1.0248493136852046	0.9730072035525906	0.9552134401028933	1.0983424422504946	1.1205794721555222	1.1280558510451664	1.1004295202386176	1.1486136742640172	1.0	12.391244212840032	-7.783876141742324	11.949016508590887	1.1068953558422416	0.9832694278044062	0.6665479443179985	0.040898030829443655	0.39133932034771907	206.87317635953067	0.011978426673393052	0.013723673375781625	1.6448407553359167e-08	7.783876141742324	-0.12362592803783545	
DTDSSVASEVRS(ph)GYR	ddPTM_K562_Methotrexat_30min_R1	1	DTDSSVASEVRSGYR	15	1	S4R3V8;Q86X29-6;Q86X29-5;Q86X29-4;Q86X29	S4R3V8	LSR	Lipolysis-stimulated lipoprotein receptor	1	DTDSSVASEVRS(1)GYR	144.4	2.6197e-08	6741900.0	1728.2	1349.6	1577.6	1897.6	1048.0	1144.9	1061.1	1321.6	1533.8	1815.5	True	False	1652.230397288251	1572.5984607223495	1246.4833191795985	1731.2403542140646	1185.8303692697084	1366.1357214856928	1299.0786859965644	1275.1185789099886	1462.493972780238	1486.695357445309	1.1113442905528355	1.0577812413597993	0.838425513967782	1.1644889758645471	0.7976283529312975	0.9189076394461996	0.8738028806579856	0.8576865277235497	0.9837213558622677	1.0	10.537893335999962	-5.3924861694850765	0.6551481188094863	0.9119224717485087	1.6380536667631715	0.2472911154709282	0.10161331446690894	11.606513872615409	1.6316140532693066	0.04193393301838717	8.153367775540652	4.050548442823509e-06	5.3924861694850765	0.7261311950146628	
DTEEPLPVKESDQTLAALLS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	DTEEPLPVKESDQTLAALLSPK	22	1	P18583-6;P18583-2;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;H7C1M2	P18583-6	SON	Protein SON	1	DTEEPLPVKESDQTLAALLS(1)PK;DTEEPLPVKESDQTLAALLS(1)PK	104.57	3.43e-05	13714500.0	3519.3	1828.35	5869.3	3107.6000000000004	2430.96	1696.1599999999999	1560.0900000000001	2844.7	3204.8	5017.2	True	False	3364.5957858908346	2130.4537608637424	4637.414138730235	2835.1615328602593	2750.673849694551	2023.9189146258814	1909.979895614343	2744.6502886086914	3055.8095475069163	4108.536462337981	0.8189280578944154	0.5185432283230604	1.1287265383282723	0.6900660512203165	0.669502114660379	0.4926131076549242	0.46488084336665725	0.6680360059520649	0.7437708233865823	1.0	12.004408855077687	-5.928538697853703	19.50381767018573	0.6935208980353811	3.9257905321941644	0.021401703589718934	0.20257200344397072	19497975.307693128	66969591.13653266	0.05116560796742651	2686201860.540842	1.1788574763491728e-06	5.928538697853703	3.2322696341587833	
DTGKTPVEPEVAIHR	ddPTM_K562_Methotrexat_30min_R1	1	DTGKTPVEPEVAIHR	15	1	P60866;P60866-2;E5RIP1;E5RJX2	P60866	RPS20	40S ribosomal protein S20	0		106.17	0.005044	9429400.0	4265.9	3829.0	5929.7	4889.4	3560.7	3173.3	3366.4	3839.9	3727.3	5307.8	False	True	4078.376143844435	4461.677168128245	4685.137004145073	4460.753893283222	4028.994461697189	3786.4953139929694	4121.400893920304	3704.8485405239626	3554.018636552212	4346.505986366407	0.9383114061356387	1.0264974170340713	1.07790878899991	1.026284999324785	0.9269501697075421	0.8711584260714211	0.9482101041268123	0.8523739647765083	0.8176725507108529	1.0	12.085640416275254	-7.860369663323188	3.8196479840861466	0.8924063914651584	1.022572447560846	0.4932043444105809	0.057146665174075774	0.18321315732955423	5.06923909400512	0.01835698458086648	0.021355784113103512	1.379209807297778e-08	7.860369663323188	0.13016605609568754	
DTHEDHDT(ph)STENT(ph)DESNHDPQFEPIVSLPEQEIK	ddPTM_K562_Methotrexat_30min_R1	1	DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK	34	0	C9JJ34;P43487-2;P43487	C9JJ34	RANBP1	Ran-specific GTPase-activating protein	2	DT(0.001)HEDHDT(0.378)S(0.378)T(0.378)ENT(0.643)DES(0.218)NHDPQFEPIVS(0.003)LPEQEIK	76.835	8.4678e-07	24093000.0	2391.7	1508.7	2766.8	2235.6	1483.3	1274.9	1364.8	1884.9	2311.4	2503.6	True	False	2286.5637317407177	1757.9870314847435	2186.0864905591507	2039.608418992917	1678.379949177251	1521.256381624692	1670.891141879286	1818.6069986285088	2203.943518505831	2050.1737796199805	1.1153023975189822	0.8574819602905094	1.0662932636687819	0.9948466024041036	0.8186525288058045	0.742013382839513	0.814999761722151	0.8870501694571498	1.0750032706565749	1.0	11.001530487256272	-3.0000000002149823	0.6614628972463069	0.8919397098770196	19.40222793411728	0.1890726759083471	0.11050916417536205	408.73513192803796	2.5245415661911332	0.04856504094336724	11106.066888646934	0.000999999999504985	3.0000000002149823	18.510288224240263	
DTHEDHDT(ph)STENTDESNHDPQFEPIVSLPEQEIK	ddPTM_K562_Methotrexat_30min_R1	1	DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK	34	0	C9JJ34;P43487-2;P43487	C9JJ34	RANBP1	Ran-specific GTPase-activating protein	1	DT(0.017)HEDHDT(0.295)S(0.295)T(0.295)ENT(0.084)DES(0.013)NHDPQFEPIVSLPEQEIK	77.352	4.7037e-06	226480000.0	1916.1	1541.8	3538.6	2293.9	1960.2	1315.0	1360.2	2377.1	2109.7	2804.4	True	False	1831.8705382733576	1796.5562438809409	2795.896217830205	2092.7973485095063	2218.0006582466444	1569.1051390983362	1665.25947478327	2293.496045646895	2011.6205074810728	2296.495984808386	0.7976807059064832	0.7823032375259481	1.2174618359123706	0.9113002427844977	0.9658195237087293	0.6832605628218673	0.7251305840720706	0.9986936884796072	0.8759521117337888	1.0	11.165218545816375														
DTHEDHDTS(ph)TENTDESNHDPQFEPIVSLPEQEIK	ddPTM_K562_Methotrexat_30min_R1	3	DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK	34	0	C9JJ34;P43487-2;P43487	C9JJ34	RANBP1	Ran-specific GTPase-activating protein	1	DT(0.005)HEDHDT(0.149)S(0.404)T(0.404)ENT(0.032)DES(0.007)NHDPQFEPIVS(0.001)LPEQEIK;DT(0.003)HEDHDT(0.131)S(0.396)T(0.396)ENT(0.051)DES(0.018)NHDPQFEPIVS(0.004)LPEQEIK;DT(0.011)HEDHDT(0.105)S(0.369)T(0.369)ENT(0.105)DES(0.041)NHDPQFEPIVSLPEQEIK	65.801	4.6183e-05	257387300.0	6438.9	4740.5	10327.5	6019.099999999999	5576.0	4745.2	3932.2	6079.9	6044.6	7827.0	True	False	6155.853665721163	5523.7870502773385	8159.898883638003	5491.414848255626	6309.3417357327235	5662.142742242911	4814.09594673046	5866.066470879873	5763.587865345829	6409.4544548192935	0.960433326910148	0.8618185977004613	1.273103497521937	0.8567679023175849	0.9843804617394083	0.8834047861882416	0.751092933207556	0.9152208682080821	0.8992322054823505	1.0	12.645985850738363														
DTHEDHDTSTENT(ph)DES(ph)NHDPQFEPIVSLPEQEIK	ddPTM_K562_Methotrexat_30min_R1	2	DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK	34	0	C9JJ34;P43487-2;P43487	C9JJ34	RANBP1	Ran-specific GTPase-activating protein	2	DT(0.007)HEDHDT(0.275)S(0.275)T(0.275)ENT(0.512)DES(0.489)NHDPQFEPIVS(0.166)LPEQEIK;DT(0.004)HEDHDT(0.312)S(0.312)T(0.312)ENT(0.325)DES(0.736)NHDPQFEPIVSLPEQEIK	89.954	1.1936e-07	62105000.0	3928.2	2374.22	3621.3999999999996	3836.1	2406.75	1936.52	2015.71	2396.58	3301.3999999999996	3754.2	True	False	3755.5210314938695	2766.519500160208	2861.3176293591528	3499.795068929474	2723.27981034339	2310.725082864419	2467.7842787203217	2312.290923005525	3147.918634591653	3074.2780010582087	1.2215944785088295	0.8998924297698301	0.9307283298303692	1.1384120329146539	0.8858274396154153	0.75163179194238	0.802719948511773	0.7521411278386675	1.0239537977723863	1.0	11.586031915732887	-7.926698380453265	7.490761553671481	0.8435978186879034	1.0280142861696975	0.3242556825797439	0.12290887933946296	0.2712745326548617	23.593335016551812	0.03754283302139251	0.04262133011962485	1.1838634689911302e-08	7.926698380453265	0.18441646748179408	
DTHEDHDTSTENT(ph)DESNHDPQFEPIVSLPEQEIK	ddPTM_K562_Methotrexat_30min_R1	1	DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK	34	0	C9JJ34;P43487-2;P43487	C9JJ34	RANBP1	Ran-specific GTPase-activating protein	1	DT(0.002)HEDHDT(0.152)S(0.152)T(0.152)ENT(0.27)DES(0.27)NHDPQFEPIVSLPEQEIK	60.101000000000006	0.0023968	137890000.0	3131.7	2170.3	5044.0	2972.7	2178.3	2130.8	1820.7	3212.0	2844.1	3786.6	True	False	2994.0342177917014	2528.9051862075544	3985.333330338424	2712.088006414497	2464.784631087984	2542.5469432629184	2229.0383221128486	3099.0321394210678	2711.8784117774635	3100.810047095791	0.9655651821032715	0.8155627554729188	1.2852555525195988	0.874638550966587	0.7948841088787407	0.8199621726729955	0.7188567787957727	0.9994266312196748	0.8745709574559074	1.0	11.598429435086475	-7.487830411625096	24.942774228814773	0.8559485416197032	1.0145506160359896	0.21085743181341787	0.1344539022813412	891.7289824372083	634614.8025169587	0.03768225954593683	0.05586219796854948	3.252142660536249e-08	7.487830411625096	0.15860207441628638	
DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK	ddPTM_K562_Methotrexat_30min_R1	1	DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK	34	0	C9JJ34;P43487-2;P43487	C9JJ34	RANBP1	Ran-specific GTPase-activating protein	0		64.592	2.8292e-05	11757000.0	1359.9	823.35	1952.4	1421.3	897.11	783.72	844.42	795.55	1207.8	1444.3	False	True	1300.1204242982826	959.3945929429061	1542.6179211246513	1296.6968357106082	1015.0956894804848	935.1627981856642	1033.8026802650256	767.570055577967	1151.6496416247044	1182.7232744468513	1.0992600318162649	0.8111741889848292	1.3042931972790672	1.0963653660380204	0.8582698179802335	0.7906860534413945	0.8740866968636646	0.6489853308559878	0.9737270471516849	1.0	10.207896845842576	-7.788352321395408	6.853805460505215	0.8365773854128266	1.0751334896360263	0.3537716331330192	0.14414917349266324	0.18245940128326282	29.598645667217948	0.04393068543465756	0.051141938430103	1.6279748022411714e-08	7.788352321395408	0.23855610422319973	
DTHPGS(ph)PGSPGPALRPLPAR	ddPTM_K562_Methotrexat_30min_R1	1	DTHPGSPGSPGPALRPLPAR	20	1	Q8N0Y2-2;Q8N0Y2	Q8N0Y2-2	ZNF444	Zinc finger protein 444	1	DT(0.017)HPGS(0.704)PGS(0.279)PGPALRPLPAR	59.606	0.027569999999999997	20823000.0	3243.5	2856.3	4122.1	3564.9	2942.4	3138.5	2963.1	3304.8	3651.0	3247.3	True	False	3100.9196236572407	3328.255026201281	3256.927541829504	3252.37075186431	3329.377174178618	3744.9707065096054	3627.6506026542465	3188.5683108215276	3481.265806898326	2659.1825030196383	1.1661176395888537	1.2516083504693178	1.224785263189381	1.2230716576132237	1.2520303403011788	1.4083165417405532	1.3641976805032612	1.1990784036826148	1.3091488842699477	1.0	11.376767079219833	-12.256263266141124	3.5407927568404918	0.9993770554758317	1.268180956674306	0.5600748710276301	0.070838673796202	21526701.285194412	36207188.554267965	147777.70254618837	0.018981114677507332	5.542896047873479e-13	12.256263266141124	0.2688039011984744	
DTHPGSPGS(ph)PGPALRPLPAR	ddPTM_K562_Methotrexat_30min_R1	1	DTHPGSPGSPGPALRPLPAR	20	1	Q8N0Y2-2;Q8N0Y2	Q8N0Y2-2	ZNF444	Zinc finger protein 444	1	DTHPGS(0.076)PGS(0.924)PGPALRPLPAR	102.61	0.00017926	37623000.0	1338.0	1477.5	2347.0	2055.5	1413.9	1472.8	1351.7	1582.5	1813.0	1935.4	True	False	1279.1831220759634	1721.6317617940667	1854.3967736527136	1875.2975063696301	1599.85263273897	1757.3977557901376	1654.8531334101938	1526.842578030461	1728.7140257208064	1584.8803055905532	0.8071165485265578	1.086285037249269	1.1700547777087393	1.1832423557505578	1.0094469765922405	1.108852037337483	1.0441502286152564	0.963380371782419	1.0907536800242201	1.0	10.63015817294381	-9.000398181683833	24.257778273604178	1.0169932742340357	1.070709362616901	0.028203859376584428	0.10298961842868988	34.48281500476247	2100810.444846942	0.04468408796890015	0.029736318981324963	9.990835729664835e-10	9.000398181683833	0.053716088382865346	
DTIIDVVGAPLT(ph)PNSR	ddPTM_K562_Methotrexat_30min_R1	2	DTIIDVVGAPLTPNSR	16	0	Q9NPF5	Q9NPF5	DMAP1	DNA methyltransferase 1-associated protein 1	1	DTIIDVVGAPLT(1)PNSR;DTIIDVVGAPLT(0.998)PNS(0.002)R	182.49	1.161e-09	133516000.0	5983.6	5373.3	7432.4	5926.3	5950.1	4992.700000000001	5091.2	6794.5	6677.4	6953.1	True	False	5720.568108560341	6261.146494516452	5872.440809755609	5406.750480174328	6732.642442931002	5957.46861443062	6233.031199835744	6555.533583840735	6366.969131466139	5693.826213083438	1.0046966476453838	1.0996377936736828	1.0313698715042874	0.9495812267242264	1.182446072460122	1.0463032048188223	1.0946999375417017	1.1513406518761042	1.1182232989190877	1.0	12.475182744488153	-7.761061914868499	24.999999178930285	1.1035691561417653	1.0276331762620958	0.2897948772787572	0.05883867337322652	13.543935510379606	897001.0393225378	0.017493584356734197	0.02118914641034173	1.7335568369005028e-08	7.761061914868499	-0.07593597987966949	
DTLQTVS(ph)SSPVTEISR	ddPTM_K562_Methotrexat_30min_R1	2	DTLQTVSSSPVTEISR	16	0	Q5T3J3	Q5T3J3	LRIF1	Ligand-dependent nuclear receptor-interacting factor 1	1	DTLQT(0.29)VS(0.389)S(0.16)S(0.16)PVTEISR;DTLQTVS(0.675)S(0.284)S(0.037)PVT(0.004)EISR	180.93	5.6388999999999996e-08	34250000.0	4464.7	4012.5	5292.5	4711.6	4186.3	4034.5	3975.4	4603.7	4373.1	5554.6	True	False	4268.4371338808305	4675.497424161551	4181.676576291855	4298.541343230915	4736.87182716964	4814.110025621479	4866.984646414796	4441.785261597999	4169.795535510016	4548.608114825512	0.9384051178136218	1.0278962940162866	0.9193310284661151	0.945023452167809	1.0413893014283888	1.0583699241819937	1.0699942759525893	0.9765152656525105	0.9167190116728648	1.0	12.15120942930443	-7.753845069157783	24.995137197194136	1.0146921411311816	0.9599424947502513	0.2156714466827414	0.0488920560227329	292.72179172104853	963429.0526224378	0.015665539857447196	0.01984274658045193	1.762604728429099e-08	7.753845069157783	-0.05474964638093027	
DTLQTVSSS(ph)PVTEISR	ddPTM_K562_Methotrexat_30min_R1	1	DTLQTVSSSPVTEISR	16	0	Q5T3J3	Q5T3J3	LRIF1	Ligand-dependent nuclear receptor-interacting factor 1	1	DTLQTVS(0.002)S(0.226)S(0.772)PVTEISR	319.45	5.3950999999999966e-276	45099000.0	3218.6	2670.1	3735.6	3179.4	2902.6	2582.7	2424.9	2913.4	2888.3	3267.7	True	False	3077.1141978428223	3111.2886410601254	2951.5486099944915	2900.6669383369476	3284.342776567039	3081.7702226230235	2968.745552420196	2810.934070669161	2754.0235634249325	2675.887865339594	1.149941384951237	1.1627126388068116	1.1030165532066918	1.0840016788105682	1.2273843082547207	1.15168137743766	1.1094431836527783	1.0504678118537034	1.0291999149506297	1.0	11.385801944920948	-9.299442661009065	1.8162346147878685	1.0136171854608167	1.1458104681029866	0.6925708150764576	0.03622502508478481	0.23176253836547198	1.3973598251751642	0.029845994567109957	0.011475318171265778	5.018308303366843e-10	9.299442661009065	0.1321932826421699	
DTNMIPGS(ph)PGSTELEGGFSR	ddPTM_K562_Methotrexat_30min_R1	3	DTNMIPGSPGSTELEGGFSR	20	0	Q12809-7;Q12809-4;Q12809;Q12809-2	Q12809-7	KCNH2	Potassium voltage-gated channel subfamily H member 2	1	DTNMIPGS(0.862)PGS(0.023)T(0.023)ELEGGFS(0.091)R;DT(0.003)NMIPGS(0.981)PGS(0.011)T(0.004)ELEGGFSR;DTNMIPGS(0.975)PGS(0.019)T(0.006)ELEGGFSR	112.58	0.00012350000000000002	57213200.0	5061.700000000001	3893.2	5205.599999999999	4588.2	4103.64	3641.22	3918.08	6061.6	6006.0	7179.5	True	False	4839.193728708449	4536.48512691483	4113.015698733088	4185.959629640054	4643.340588311017	4344.834231625588	4796.809177296596	5848.410092252411	5726.782370920659	5879.22297922258	0.8231009005459331	0.7716130418844392	0.6995849133922387	0.7119919833681102	0.7897881411745697	0.7390150445016992	0.8158916908320574	0.9947590205237898	0.9740713000951566	1.0	12.521409780183404	-9.157345174916015	3.0588712865594694	0.9918637780694566	0.7541280624852725	0.8997509017592712	0.034863986181156256	0.0804199087988112	1.43145565996521	0.020508544809374345	0.010545200809545182	6.96073059078601e-10	9.157345174916015	-0.23773571558418405	
DTPGCAT(ph)TPPHSQASSVR	ddPTM_K562_Methotrexat_30min_R1	1	DTPGCATTPPHSQASSVR	18	0	Q15572-5;Q15572-4;Q15572-2;Q15572-6;Q15572	Q15572-5	TAF1C	TATA box-binding protein-associated factor RNA polymerase I subunit C	1	DTPGCAT(0.493)T(0.493)PPHS(0.013)QASS(0.001)VR	115.2	0.0012447	3686900.0	1549.2	1298.7	2320.1	1671.4	1495.0	1513.9	1430.3	1585.5	1337.0	1776.3	True	False	1481.0990229597037	1513.2881008744191	1833.1427160424623	1524.8709570159074	1691.6187042540203	1806.4397491110053	1751.0811842247542	1529.7370663300442	1274.8431618249963	1454.5948573010746	1.0182209950252445	1.0403502344853925	1.26024281389511	1.0483131776261236	1.1629483603377584	1.241885147636752	1.2038274268848954	1.051658514157263	0.8764249065134203	1.0	10.506401665456172	-9.54121585299148	5.187310397750102	0.9418360868664027	1.141106467193173	0.47775322359774486	0.0839251505018098	0.15593165956493565	12.225371793686676	0.05908939322280651	0.022522170321642308	2.8759686458607553e-10	9.54121585299148	0.19927038032677025	
DTPGHGSGWAET(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	DTPGHGSGWAETPR	14	0	O75533	O75533	SF3B1	Splicing factor 3B subunit 1	1	DTPGHGSGWAET(1)PR	129.43	0.0012007	11104000.0	1787.7	1762.8	1675.5	1741.2	1610.5	1500.6	1482.5	2276.8	2226.5	1893.6	True	False	1709.1148485315405	2054.0727375232345	1323.8354470622578	1588.5516993873991	1822.308978729833	1790.569712342938	1814.988363009995	2196.723653497476	2122.990500974835	1550.6506906408356	1.102192040313874	1.3246521282458206	0.853728989418731	1.024442002944519	1.1751898668917689	1.154721513458941	1.1704688708840782	1.416646358045756	1.369096543656437	1.0	10.598658017047008	-8.88883185630409	2.3943750628556235	1.293007115124127	1.0992987083977777	0.15617363359563097	0.15321057751025413	0.4535693760549792	5.261819682997413	0.07822563703746865	0.04704926025366677	1.2917192855274697e-09	8.88883185630409	-0.19370840672634926	
DTPRPDHPPHDGHSPAS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	DTPRPDHPPHDGHSPASR	18	1	Q9C0J8	Q9C0J8	WDR33	pre-mRNA 3 end processing protein WDR33	1	DTPRPDHPPHDGHS(0.5)PAS(0.5)R	75.064	0.013615	638800.0	152.26	118.54	125.56	0.0	0.0	60.043	0.0	175.55	166.57	261.68	True	False	145.56683271097626	138.12672016451344	99.20667187892397	0.0	0.0	71.64545997481481	0.0	169.37580699731276	158.82619705698542	214.28721626895526	0.679307124547612	0.644586842694099	0.4629612237549818	0.0	0.0	0.33434313638612706	0.0	0.7904148924344909	0.7411837244534465	1.0	7.743401975507808	-9.361257149265237	7.2712203669561255	0.8332445682412676	0.300773767630345	0.5071888345036164	0.24442743807849482	0.26154479297379696	16.65591179224387	0.1505146206521852	0.07155911200566714	4.352540799212546e-10	9.361257149265237	-0.5324708006109226	
DTS(ph)PSSGSAVSSSK	ddPTM_K562_Methotrexat_30min_R1	2	DTSPSSGSAVSSSK	14	0	F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8-7;Q8NEY8-5;Q8NEY8-6;Q8NEY8-9;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8	F8WF16	PPHLN1	Periphilin-1	1	DT(0.088)S(0.912)PSSGSAVSSSK;DT(0.077)S(0.922)PS(0.001)SGSAVSSSK	212.55	4.414199999999999e-19	64753000.0	9641.8	7022.1	14072.1	10219.4	6861.4	6455.0	5970.7	8881.8	9004.8	10659.1	True	False	9217.958016765344	8182.382669708363	11118.558516624771	9323.481068642071	7763.7943661328045	7702.337393824915	7309.781463085182	8569.42205974784	8586.168813464263	8728.63370120919	1.0560596689363155	0.9374184952422561	1.27380285359947	1.0681489666991613	0.8894627305825968	0.8824218838233411	0.8374485301259174	0.981759843875761	0.9836784435432099	1.0	13.091540130182928	-7.712845890624628	6.746120890349396	0.921365405039921	1.0883743829806358	0.41139895241133495	0.09042923760544518	0.20334346788414556	21.294508108647456	0.027837114866219006	0.03567928353577761	1.9371092251145942e-08	7.712845890624628	0.1670089779407148	
DTSATSQSVNGS(ph)PQAEQPSLESTSK	ddPTM_K562_Methotrexat_30min_R1	2	DTSATSQSVNGSPQAEQPSLESTSK	25	0	C9J0I9;Q86WB0;Q86WB0-2;Q86WB0-3;F8WAU5	C9J0I9	ZC3HC1	Nuclear-interacting partner of ALK	1	DTSATSQSVNGS(1)PQAEQPSLESTSK;DT(0.002)S(0.002)AT(0.005)S(0.016)QS(0.164)VNGS(0.747)PQAEQPS(0.056)LES(0.004)T(0.002)S(0.001)K	172.98	2.6883e-25	31140000.0	6349.91	4718.83	10314.8	7434.9	5137.24	4632.71	3860.4	6103.54	6422.25	8052.4	True	False	6070.775559567552	5498.536451104362	8149.86444008223	6783.0938604269295	5812.877105178548	5527.915641788791	4726.192969014357	5888.875038680596	6123.680999274927	6594.03233064864	0.9206469206028876	0.8338655583393968	1.2359454778834162	1.0286716109806657	0.8815360334465858	0.838320979424895	0.7167379127104541	0.8930612929071461	0.9286701508593536	1.0	12.68694524524517	-7.81938537024168	5.598934204617978	0.8595695079345301	1.0090161095247958	0.21736243405187594	0.1170700202208133	0.2887664770474297	18.349567508648093	0.038344430859988246	0.04426925168481096	1.5157048132686143e-08	7.81938537024168	0.14944660159026568	
DVDDGSGSPHS(ph)PHQLSSK	ddPTM_K562_Methotrexat_30min_R1	2	DVDDGSGSPHSPHQLSSK	18	0	F5GWT4;Q9H4A3-4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7	F5GWT4	WNK1	Serine/threonine-protein kinase WNK1	1	DVDDGSGSPHS(1)PHQLSSK;DVDDGSGSPHS(1)PHQLSSK	137.72	9.3607e-09	46900000.0	5152.6	4021.7999999999997	7749.2	6066.5	3567.7	3736.1	3633.6	4300.4	4453.2	6119.2	True	False	4926.097873549034	4686.334091088577	6122.748819083769	5534.659363848874	4036.9150843926877	4458.048448810115	4448.527295671581	4149.152494510076	4246.17170399332	5010.953583739649	0.9830659556564307	0.9352180204373776	1.221872986202038	1.1045121993962645	0.8056181357361444	0.8896606951771235	0.8877606270604622	0.8280165491801633	0.8473779756755249	1.0	12.290869458865664	-7.757394249524208	24.999985355911495	0.8690369850004097	1.0636499141979694	0.5250501767529467	0.0859033168181773	83.32134016783439	514944.4295654903	0.02671826450060636	0.03323010979629756	1.748258910710218e-08	7.757394249524208	0.19461292919755968	
DVDGRTPLVLAT(ph)QMS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	DVDGRTPLVLATQMSR	16	1	H0YMI1;H0YN48;H0YNH8;Q9BZF9-2;Q9BZF9	H0YMI1	UACA	Uveal autoantigen with coiled-coil domains and ankyrin repeats	2	DVDGRT(0.345)PLVLAT(0.673)QMS(0.983)R	101.42	0.0073142	9960700.0	1693.2	1485.5	1915.6	1532.2	1562.0	1422.6	1551.8	2038.8	2104.1	1657.5	True	False	1618.7689553804355	1730.9536258173173	1513.5417382228954	1397.874404893966	1767.4303786252722	1697.4973162595388	1899.8306520869553	1967.0942483971592	2006.2808502587682	1357.3106884966116	1.1926296382248496	1.2752818057703215	1.1151033813041942	1.0298853584084595	1.3021560896885873	1.2506328364213544	1.3997021228730255	1.4492586443682676	1.4781294122725657	1.0	10.406535276199705	-8.24061499036793	1.9527365236577137	1.361657484606644	1.1641832000212107	0.19111573745477894	0.14219059837891032	0.4553515193117081	3.414280472475188	0.05615132230591334	0.05223720241181894	5.746256521328828e-09	8.24061499036793	-0.19747428458543337	
DVDVSEDS(ph)PPPLPERTPESFVLASEHNTPVR	ddPTM_K562_Methotrexat_30min_R1	2	DVDVSEDSPPPLPERTPESFVLASEHNTPVR	31	1	Q05209-2;Q05209-3;Q05209	Q05209-2	PTPN12	Tyrosine-protein phosphatase non-receptor type 12	1	DVDVS(0.056)EDS(0.944)PPPLPERTPESFVLASEHNTPVR;DVDVS(0.012)EDS(0.988)PPPLPERTPESFVLASEHNTPVR	124.17	5.0697e-21	17728900.0	721.66	601.79	815.84	754.0699999999999	712.19	481.22	480.87	612.76	827.96	943.8699999999999	True	False	689.9366904912852	701.2255688189857	644.6063331132638	687.9618538692029	805.8554682158336	574.2089544006859	588.717338361293	591.2088834843258	789.468320317594	772.925996712698	0.8926296869630839	0.9072350675243702	0.8339819541001523	0.8900746731189624	1.0426036537044772	0.7429028870070771	0.7616736154109762	0.7648971389224503	1.021402208846968	1.0	9.594186480656452	-8.284674021670257	24.99922401494719	0.8374499138915529	0.9072704164053005	0.048038899525277845	0.10217750040214821	2020.1459422981509	2173559.4841166027	0.03601475068961092	0.03178190387009822	5.191895927048247e-09	8.284674021670257	0.0698205025137476	
DVESYIHR	ddPTM_K562_Methotrexat_30min_R1	1	DVESYIHR	8	0	Q9NR30;Q9NR30-2	Q9NR30	DDX21	Nucleolar RNA helicase 2	0		126.41	0.0022058000000000004	5855100.0	4164.8	3562.1	4636.8	4216.5	3790.9	3670.4	3254.3	4379.5	4701.1	5106.9	False	True	3981.720378790714	4150.6764796525495	3663.5990456211734	3846.845991538574	4289.469796626467	4379.652853647555	3984.1596153412675	4225.47050267577	4482.546887102085	4181.990923127207	0.9521111958352281	0.9925120728260115	0.8760418453710104	0.9198599571952158	1.025700408124963	1.047265030975376	0.9526944674384886	1.0103968612911407	1.071869109593889	1.0	12.029974215271173	-7.7640621778652985	24.99954421489997	1.016706707869382	0.9350092173886579	0.5106481499189552	0.039723789803260925	61.39427118191981	585187.8420974973	0.012701993065530633	0.015067538900491707	1.7216220730084045e-08	7.7640621778652985	-0.08169749048072417	
DVLLS(ph)FVMSRNGS(ph)AVGVS(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	DVLLSFVMSRNGSAVGVSR	19	1	A2RU67	A2RU67	KIAA1467	Uncharacterized protein KIAA1467	3	DVLLS(0.996)FVMS(0.079)RNGS(0.931)AVGVS(0.994)R;DVLLS(0.854)FVMS(0.37)RNGS(0.777)AVGVS(0.999)R	58.835	0.020627	39742000.0	4861.1	4622.8	6626.8	6284.8	5174.9	5924.5	5123.7	6015.2	5883.6	6815.4	True	False	4647.411864516791	5386.6391258352705	5235.925240580229	5733.821341781486	5855.490055280359	7069.325776873076	6272.82015214456	5803.642006552181	5610.0727202045955	5581.0650174237135	0.8327105758502867	0.9651632993019328	0.9381587966157031	1.0273704613511718	1.049170729421698	1.2666625016557076	1.1239467973516224	1.0398807375355057	1.0051975210269584	1.0	12.446324738032677	-7.222148416494313	1.3791073821957458	1.0938333876180535	0.8865026314865514	0.4965939385003941	0.07711064136605107	0.40270125630025405	1.4641012523814612	0.02756614572701701	0.06999917865655936	5.995861377090392e-08	7.222148416494313	-0.2073307561315021	
DVNQQEFVR	ddPTM_K562_Methotrexat_30min_R1	1	DVNQQEFVR	9	0	M0R2L9;M0QYF7;M0R140;P39019	M0R2L9	RPS19	40S ribosomal protein S19	0		140.11	0.00063093	21260000.0	1564.2	1500.9	2050.8	1370.2	1427.0	1216.3	1332.8	1367.3	1531.5	1681.6	False	True	1495.4396409201966	1748.898214062073	1620.3651058402138	1250.0766933727398	1614.6755123548412	1451.3327609774208	1631.7143272982946	1319.2112840069817	1460.3008992782206	1377.0459449628372	1.0859765764464413	1.270036210817404	1.1766964724506292	0.9077959220935624	1.172564734140673	1.0539465050431476	1.1849381883495036	0.9580009213436838	1.0604590969676253	1.0	10.427360980274571	-5.376388999263269	0.17591403606049594	0.9813539617990323	1.4186968359556245	0.18025264469463553	0.09775910103507139	42.81917791105086	0.9967219472932441	0.27647230293467523	4.320219854000752	4.2034995062160664e-06	5.376388999263269	0.4373428741565921	
DVPDPQEGVGMET(ph)CPPQTTAR	ddPTM_K562_Methotrexat_30min_R1	1	DVPDPQEGVGMETCPPQTTAR	21	0	B1AL46	B1AL46	NUTM2E	NUT family member 2E	1	DVPDPQEGVGMET(0.954)CPPQT(0.023)T(0.023)AR	73.11	0.013045	10464000.0	899.36	917.86	965.92	1057.7	995.97	908.19	851.88	925.69	909.73	885.51	True	False	859.8252112632578	1069.5207640475812	763.1865920778139	964.973083185189	1126.9575122915571	1083.6848640895196	1042.9357751642196	893.1329580139134	867.4368508654098	725.135558232661	1.1857441019150539	1.4749252769430783	1.0524743731198245	1.3307485369178045	1.5541335678507313	1.4944583144298345	1.4382631817230398	1.231677233137904	1.1962409524911082	1.0	9.50210691029379	-9.910883557464148	1.6602245728268021	1.0089188801273188	1.3624644549952278	0.37131688879690705	0.14461276816018426	0.3950395628443848	2.4053844893057663	0.1446094944162244	0.0422828204950841	1.2277683748729718e-10	9.910883557464148	0.35354557486790905	
DVPPDILLDS(ph)PER	ddPTM_K562_Methotrexat_30min_R1	5	DVPPDILLDSPER	13	0	A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79	A0A590UJS4;Q6KC79	NIPBL	Nipped-B-like protein	1	DVPPDILLDS(1)PER;DVPPDILLDS(1)PER;DVPPDILLDS(1)PER;DVPPDILLDS(1)PER;DVPPDILLDS(1)PER	209.56	2.1966e-17	38386200.0	5919.969999999999	4746.75	7081.430000000001	6369.72	4714.57	4862.33	5559.799999999999	6204.85	6398.35	7085.450000000001	True	False	5659.735207171927	5531.069756545505	5595.134616466777	5811.296537228294	5334.61859164875	5801.906457028149	6806.7266783561345	5986.621908557544	6100.892105058309	5802.206345585712	0.9754453513149913	0.953270088498923	0.9643115537804899	1.0015666784497415	0.9194120777361356	0.9999483147375839	1.1731273024329194	1.0317836960610913	1.0514779622927122	1.0	12.502385888102111	-8.534374871689039	24.999859075297326	1.069573318592819	0.9640262898623074	0.5201974447092557	0.04578782876118346	166.2414868600479	361510.6452906941	0.016729939841156657	0.01296916997697394	2.921629414681739e-09	8.534374871689039	-0.10554702873051147	
DVPPDILLDS(ph)PERK	ddPTM_K562_Methotrexat_30min_R1	2	DVPPDILLDSPERK	14	1	A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79	A0A590UJS4;Q6KC79	NIPBL	Nipped-B-like protein	1	DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK	130.72	0.00036731	14021100.0	3057.12	2586.33	4696.200000000001	3679.96	2619.33	2689.83	2402.2200000000003	3165.7	3399.0	4551.4	True	False	2922.732665292129	3013.6770724066664	3710.531797370204	3357.343620306485	2963.8178064305584	3209.6015789360295	2940.9789850859183	3054.360536664158	3240.9812318946583	3727.0973560322645	0.7841846847820381	0.8085855518448061	0.9955553726990122	0.9007931104543493	0.7952080461846947	0.861153136700689	0.7890802692143196	0.8195011412086434	0.8695724641185364	1.0	11.863836789060352	-10.039559502041651	19.217749390874914	1.0000000021644684	0.8469259954345141	0.365846459615887	0.06113446496826105	353.33535959238	171649.6073920465	0.06317345597533931	0.01631131182629511	9.129363466719345e-11	10.039559502041651	-0.1530740067299543	
DVQEIFR	ddPTM_K562_Methotrexat_30min_R1	1	DVQEIFR	7	0	A0A140T9L4;F6UJC5;Q5STU3;A0A0G2JJZ9;A0A140T9X3;F6WLT2;A0A140T973;A0A140TA18;F6TRA5;A0A0A0MT12;F6S4E6;A0A140T996;A0A140T9X9;A0A140T9K1;Q13838;Q13838-2;K7EQN7;O00148-3;O00148-2;O00148	A0A140T9L4	DDX39B;DDX39A	Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A	0		161.9	7.131e-17	28391000.0	4377.2	4080.2	5511.4	4813.9	3728.1	3634.7	3757.6	4301.4	4212.9	4897.5	False	True	4184.783529111293	4754.383698458307	4354.632457737348	4391.872861061909	4218.410495872519	4337.054333901692	4600.337452172924	4150.11732394327	4017.0431985433984	4010.515292254696	1.043452829414004	1.1854795087404868	1.0858037285501012	1.0950894189441716	1.0518375292120992	1.0814207197458203	1.1470689218059638	1.034809001216921	1.001627697643071	1.0	11.969571898354705	-9.466206044682837	5.4204646339189	1.0054306216858027	1.0987649327532358	0.5112475733067399	0.03958577655911762	0.16370604562512903	10.334061846086353	0.023074500830781917	0.010366459191669442	3.418172338367264e-10	9.466206044682837	0.09333431106743317	
DVRRGRDLEQILTQYT(ph)T(ph)FVK	ddPTM_K562_Methotrexat_30min_R1	1	DVRRGRDLEQILTQYTTFVK	20	3	G3V170;Q9HA47-3;Q9HA47;Q9HA47-4	G3V170	UCK1	Uridine-cytidine kinase 1	2	DVRRGRDLEQILT(0.105)QY(0.602)T(0.646)T(0.646)FVK	41.86	0.032855	0.0	857.36	808.71	1077.5	973.4	490.0	852.58	667.33	881.2	889.31	1229.4	True	False	819.6714809738771	942.3355817803583	851.3474749087337	888.0635333009956	554.4435886852647	1017.329018625445	816.9957398229077	850.2076965310855	847.9661722083673	1006.7437468704283	0.8141808514052503	0.9360232777305152	0.8456446613701246	0.8821147745507604	0.5507296076174424	1.0105143655353432	0.8115230339027456	0.8445125178815841	0.8422860085740406	1.0	9.975480796044796	-11.405389349034532	8.867553028986498	1.000000142839289	0.8380484564279514	0.15948699964113877	0.11190541567148399	0.0	0.0	0.104744384391821	0.02540424473751623	3.931974122663829e-12	11.405389349034532	-0.16195168641133761	
DVS(ph)LWAAVK	ddPTM_K562_Methotrexat_30min_R1	2	DVSLWAAVK	9	0	Q96EU7	Q96EU7	C1GALT1C1	C1GALT1-specific chaperone 1	1	DVS(1)LWAAVK;DVS(1)LWAAVK	98.04799999999999	0.0089257	90920000.0	5112.200000000001	3786.3	5893.1	5403.4	3095.1	3414.2	2695.1	3490.4	4620.7	4475.5	True	False	4887.473809175439	4411.9217189041465	4656.218843976482	4929.692311319707	3502.1599006933934	4073.945829589006	3299.54478053844	3367.6406536224463	4405.884665553294	3664.9435815183056	1.3335740920602837	1.203817090432913	1.2704749037494087	1.345093642417667	0.9555835779721678	1.1115985114022573	0.9002989287959274	0.9188792620450945	1.2021698472444242	1.0	11.839575274210738	-7.762710921181298	24.999830388054104	1.0098183352035142	1.2809408187949063	0.6818116985389726	0.09143525198196556	19.867827917300172	390624.5094582251	0.02752157863905944	0.03296733219973902	1.726987041424143e-08	7.762710921181298	0.2711224835913921	
DVSGFSDPYCLLGIEQGVGVPGGS(ph)PGSR	ddPTM_K562_Methotrexat_30min_R1	3	DVSGFSDPYCLLGIEQGVGVPGGSPGSR	28	0	K7EIH3;K7EQ37;K7EN81;Q70J99-2;Q70J99;Q70J99-3	K7EIH3	UNC13D	Protein unc-13 homolog D	1	DVSGFSDPYCLLGIEQGVGVPGGS(0.5)PGS(0.5)R;DVSGFSDPYCLLGIEQGVGVPGGS(0.5)PGS(0.5)R;DVSGFSDPYCLLGIEQGVGVPGGS(0.582)PGS(0.418)R	165.85	5.929499999999999e-35	90503000.0	7291.199999999999	5647.6	7254.6	6679.3	5768.9	5629.4	5987.6	8370.8	8229.6	9491.3	True	False	6970.687578236369	6580.7699072136475	5731.958599974849	6093.7361392822495	6527.611466870254	6717.201878357552	7330.471718285764	8076.394219385396	7847.007692262516	7772.3335974225565	0.8968590309283652	0.8466916434719101	0.7374823182931401	0.7840291545518633	0.8398521994777637	0.8642451837868996	0.9431493934738826	1.0391208918340396	1.0096076801007001	1.0	12.924132109030854	-8.814641059435292	1.7565536701214268	1.020221821616995	0.8156734251137759	0.8174138537602961	0.040691884358728385	0.15505340830261535	0.9735654468088449	0.02465406828945983	0.01457918799545779	1.5323534150632888e-09	8.814641059435292	-0.204548396503219	
DVTNFTVGGFAPMS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	DVTNFTVGGFAPMSPR	16	0	O00267-2;O00267	O00267-2	SUPT5H	Transcription elongation factor SPT5	1	DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFT(0.006)VGGFAPMS(0.994)PR;DVTNFTVGGFAPMS(1)PR	145.33	1.9134e-09	810313000.0	18787.1	15018.0	18825.3	19688.3	15797.5	14634.2	14595.7	16909.9	17282.6	20926.6	True	False	17961.24157903837	17499.469237646896	14874.12679294607	17962.257307057727	17875.148147460128	17462.05203543186	17869.157268118044	16315.169232377437	16479.135698247323	17136.589957099965	1.0481222707669877	1.0211756995677301	0.8679747155170437	1.0481815432372925	1.0430983172386736	1.0189922311934092	1.0427487214697908	0.9520662671640691	0.9616344756746514	1.0	14.064792432906856	-9.276018577818483	24.704152073010636	0.9676377783275084	1.0103962705207963	0.11747451899901451	0.05173673289506647	1665.9220320756856	2822851.7746505463	0.029364687582719456	0.014213124266116622	5.296407869589354e-10	9.276018577818483	0.04275849219328787	
DVVLSTS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	DVVLSTSPK	9	0	A0A075B784;Q9P275	A0A075B784	USP36	Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36	1	DVVLS(0.024)T(0.019)S(0.958)PK;DVVLS(0.001)T(0.016)S(0.982)PK	143.5	9.1077e-06	22564000.0	9548.1	6518.6	13303.0	8936.900000000001	6421.4	5984.1	6208.799999999999	7635.9	8363.7	10764.5	True	False	9128.376956572132	7595.68785274504	10510.882096251396	8153.415852432372	7265.926653843993	7140.442633367572	7601.2814490768715	7367.341068930681	7974.87341253233	8814.944739862312	1.0355569122620178	0.8616829800868023	1.1923934189535912	0.9249537113445054	0.8242736475688316	0.8100382752347355	0.8623175383848863	0.8357784746641256	0.9046991952733325	1.0	13.105735810103575	-7.515341929160439	24.331983262727352	0.8622128424936698	1.0206608407354292	0.37498855955333565	0.08979904077188128	241.37171990518772	779249.8865451823	0.02504312624983384	0.03383417085732317	3.052516856292516e-08	7.515341929160439	0.15844799824175937	
DVYLS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	5	DVYLSPR	7	0	P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39	P38159;Q96E39	RBMX;RBMXL1	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1	1	DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR	104.01	0.011403	3987610000.0	23907.6	21418.3	29140.300000000003	23041.2	20405.199999999997	19665.9	18396.8	23107.899999999998	24442.2	23466.5	True	False	22856.65053015193	24957.310026148105	23024.149255761447	21021.2137697708	23088.841460899108	23466.056847904176	22522.75070261199	22295.182059317583	23305.88745696254	19216.489454965755	1.1894290361263418	1.2987445019360109	1.1981454422109212	1.0939154010952132	1.2015119366629525	1.2211417128449695	1.1720533428019997	1.1602109798236984	1.2128067153774562	1.0	14.230057182440591	-15.675903069134113	0.2559856511145945	2.5089774899789854e-13	1.2102150217398369	0.5877157755075679	0.04879260630255831	118.97546980730498	1.3728624095937765	62.237660638326844	0.07162472771592218	2.109098830477969e-16	15.675903069134113	1.210215021739586	
DVYLS(ph)PRDDGYSTK	ddPTM_K562_Methotrexat_30min_R1	4	DVYLSPRDDGYSTK	14	1	P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39	P38159;Q96E39	RBMX;RBMXL1	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1	1	DVY(0.001)LS(0.853)PRDDGY(0.004)S(0.114)T(0.028)K;DVYLS(0.967)PRDDGYS(0.031)T(0.001)K;DVYLS(0.978)PRDDGYS(0.021)T(0.001)K;DVYLS(0.992)PRDDGYS(0.006)T(0.002)K	139.6	3.8279000000000004e-05	327834500.0	6312.300000000001	4609.7699999999995	8642.199999999999	6892.1	4380.01	3697.3100000000004	4060.0599999999995	5539.0599999999995	5599.799999999999	8080.7	True	False	6034.818850134605	5371.456139807401	6828.320322650816	6287.880293675567	4956.05808750479	4411.762830296331	4970.631806490632	5344.2481202309045	5339.466520259995	6617.206926416029	0.9119888371698762	0.8117406935491824	1.031903701755497	0.9502317765784559	0.7489652571873039	0.6667107254398349	0.7511676545352942	0.8076289860147117	0.8069063850708269	1.0	12.692006679381741	-7.760238954518362	24.999992686482997	0.7784822107800728	0.9258028324468609	0.298525754174806	0.09481190989022821	36.30280832200032	756027.0407795947	0.028569785300194564	0.034850282274832514	1.7368449309454214e-08	7.760238954518362	0.14732062166678805	
DVYLSPRDDGY(ph)STK	ddPTM_K562_Methotrexat_30min_R1	1	DVYLSPRDDGYSTK	14	1	P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39	P38159;Q96E39	RBMX;RBMXL1	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1	1	DVYLS(0.005)PRDDGY(0.735)S(0.216)T(0.045)K	80.706	0.031443	816970000.0	1426.9	1081.4	2131.8	1446.5	1197.5	1219.0	1093.9	1389.2	1308.4	2227.2	True	False	1364.1751845218184	1260.0829693428789	1684.3643127707094	1319.6875908361324	1354.9922396951115	1454.554497764923	1339.2349209420806	1340.341048593944	1247.572769582517	1823.832497990741	0.7479717496122519	0.6908984080122887	0.9235301567585403	0.7235793814892489	0.7429367780143538	0.7975263624084777	0.7342971037183917	0.734903589046996	0.6840391159588003	1.0	10.83275752216112	-12.065398075120182	4.505438861473492	1.0000145775374927	0.7554917563142979	0.5694191937146383	0.06433292795102012	51531064.920575395	0.9694513031584758	8044.945299484061	0.015435585707711984	8.602049253044784e-13	12.065398075120182	-0.2445228212231948	
DVYLSPRDDGYS(ph)TK	ddPTM_K562_Methotrexat_30min_R1	1	DVYLSPRDDGYSTK	14	1	P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39	P38159;Q96E39	RBMX;RBMXL1	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1	1	DVYLS(0.223)PRDDGY(0.219)S(0.434)T(0.125)K	94.67299999999999	0.01952	36666000.0	3743.9	2715.6	4931.6	4314.5	2981.0	2360.3	2051.9	3266.0	2651.1	4371.0	True	False	3579.322638819281	3164.3067426923644	3896.52455430154	3936.254483693392	3373.053750756681	2816.3945702006135	2512.0908074605118	3151.1329288135785	2527.850939651644	3579.369544144007	0.9999868956462452	0.8840402488950319	1.0886063889872482	1.0997060893400246	0.9423597393778838	0.7868409605284676	0.701824937738098	0.8803597644643759	0.7062279846983975	1.0	11.805489783985424	-8.117829909305707	3.9112235340469406	0.8011191545090522	1.0143193304871652	0.48820786691992824	0.09775149801346088	0.19568803755362704	5.225502783016986	0.03273996039153765	0.03308471980201872	7.623775354266389e-09	8.117829909305707	0.21320017597811292	
DWEDDS(ph)DEDMSNFDR	ddPTM_K562_Methotrexat_30min_R1	2	DWEDDSDEDMSNFDR	15	0	B4DDC6;A0A087WYT3;Q15185-2;Q15185-4;Q15185	B4DDC6	PTGES3	Prostaglandin E synthase 3	1	DWEDDS(1)DEDMSNFDR;DWEDDS(0.995)DEDMS(0.005)NFDR	187.08	3.943399999999999e-06	385940000.0	6217.2	4731.1	7202.1	4913.1	5752.6	4810.4	4780.9	8829.7	8118.099999999999	8926.1	True	False	5943.899332265084	5512.833860050021	5690.477632519901	4482.376151079847	6509.167731165005	5739.941719481854	5853.138525945691	8519.154446278397	7740.691302925581	7309.496794322544	0.8131749010249035	0.7542015565739036	0.7785047032156615	0.6132263652624368	0.8905083228466324	0.7852718020124451	0.8007580672984165	1.1654912350321327	1.0589909977028729	1.0	12.83555637520043	-9.20964538166106	6.857459210705963	1.0837819656248702	0.7731857065683272	0.7678597842799912	0.0751236448631667	0.10289157048669774	11.397166428374634	0.03558554696318289	0.02023988594054879	6.170986812755629e-10	9.20964538166106	-0.310596259056543	
DWGEHNQRLEEHQAR	ddPTM_K562_Methotrexat_30min_R1	1	DWGEHNQRLEEHQAR	15	1	Q14151	Q14151	SAFB2	Scaffold attachment factor B2	0		50.155	0.032916	3343100.0	784.89	578.87	796.85	1086.1	679.13	685.13	755.16	792.71	729.91	921.56	False	True	750.3871754007497	674.5184283923728	629.6020745995584	990.8832992790337	768.4474987424975	817.5216760079419	924.5238530931722	764.8299399876948	695.976643416367	754.6565539010181	0.99434262052294	0.8938084813622962	0.8342895471389995	1.313025500350984	1.0182744650797642	1.083302956532952	1.2250921936794497	1.013480815920948	0.9222428929009902	1.0	9.55967640942353	-7.216277633809708	24.99994529940473	1.086100598052971	0.9061130184541588	0.3332301784537386	0.11316035425114086	506.0867040497386	280151.1635969638	0.03072124118490565	0.05321055561577552	6.077463597267543e-08	7.216277633809708	-0.17998757959881218	
DY(ph)S(ph)S(ph)GT(ph)RCQFQT(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	DYSSGTRCQFQTK	13	1	Q7Z5G4-3;Q7Z5G4	Q7Z5G4-3	GOLGA7	Golgin subfamily A member 7	5	DY(1)S(1)S(1)GT(1)RCQFQT(1)K	45.873000000000005	0.031225	10181000.0	247.59	205.72	302.89	136.87	134.06	218.39	170.8	303.95	209.26	232.31	True	False	236.70624005589528	239.71173335788515	239.31752823675774	124.87081960438395	151.69123979417665	260.5907766750464	209.10624782604197	293.25990621949995	199.53154827486807	190.2364078700742	1.2442741255793612	1.260072853780971	1.2580006683063762	0.6563981153894948	0.7973828011816605	1.3698259948906424	1.0991915278849005	1.541555107683634	1.048860996214469	1.0	7.571649568607613	-8.285933021214781	24.987208252926063	1.2386904526479623	1.0457142322684507	0.1066980642918236	0.23771172065511834	1761.2351826868264	1796718.5782868527	0.0887660550983379	0.07832337199733196	5.176866656850137e-09	8.285933021214781	-0.19297622037951156	
DYAFIHFDER	ddPTM_K562_Methotrexat_30min_R1	1	DYAFIHFDER	10	0	O60506-4;O60506-3;O60506-2;O60506;B7Z645;O60506-5	O60506-4	SYNCRIP	Heterogeneous nuclear ribonucleoprotein Q	0		75.819	0.029211	0.0	2855.0	2196.7	2795.6	2144.1	2309.7	2063.4	1929.0	2991.1	2868.0	2827.9	False	True	2729.4976184804755	2559.6673374842794	2208.841764134438	1956.1300819300038	2613.4660342578695	2462.122847160084	2361.627353960392	2885.9013176283825	2734.6673059940804	2315.7399070887286	1.1786719268969672	1.105334554044201	0.9538384502391379	0.8447106153597299	1.1285663067159526	1.0632121680087048	1.0198154580016507	1.2462113334897102	1.1809043397416825	1.0	11.177257510431048	-9.2391924808328	24.526525765527982	1.160168390089235	1.03761962767672	0.1525529458567575	0.10556741412907193	973.0590343544669	1072770.624049331	0.05187389915968797	0.029914432097028418	5.765108951176905e-10	9.2391924808328	-0.122548762412515	
DYAFVHFEDR	ddPTM_K562_Methotrexat_30min_R1	2	DYAFVHFEDR	10	0	B4DT28;O43390-4;O43390-3;O43390;O43390-2;A0A286YEZ8	B4DT28	HNRNPR	Heterogeneous nuclear ribonucleoprotein R	0	;	106.16	0.005563800000000001	30160000.0	12097.400000000001	11078.0	14694.0	12240.4	12104.7	10839.1	10323.1	13842.6	12430.9	13751.5	False	True	11565.612781017753	12908.45120619605	11609.930205391125	11167.303136447006	13696.680220323517	12933.602671635574	12638.31795628229	13355.747911939625	11852.990172273998	11260.970095240516	1.0270529699662372	1.1463001053214632	1.0309884590047973	0.9916821589968435	1.2162966515746685	1.148533613201051	1.1223116524946561	1.186021079798842	1.0525727421373492	1.0	13.459043495716045	-7.751426589925989	24.999984341137445	1.1317036849414845	1.0546685651578778	0.19541719702555027	0.06911757709880381	315.9897455207762	788961.3990048983	0.019942304932198427	0.025424026784489344	1.7724476218514635e-08	7.751426589925989	-0.07703511978360678	
DYASHLS(ph)PGSIIQPQR	ddPTM_K562_Methotrexat_30min_R1	2	DYASHLSPGSIIQPQR	16	0	C9J330;C9JQE8;Q9Y618-5;Q9Y618-4;Q9Y618;C9JE98;C9J0Q5	C9J330	NCOR2	Nuclear receptor corepressor 2	1	DYASHLS(1)PGSIIQPQR;DYASHLS(0.956)PGS(0.044)IIQPQR	107.69	0.00081624	11108300.0	2309.65	2437.1	2997.6	2584.0	2284.0	2192.36	1816.5100000000002	2070.57	2496.7	2595.1	True	False	2208.1205514968224	2839.789351382957	2368.4447246277687	2357.464731918813	2584.3860337900915	2616.00254201797	2223.908607953651	1997.746879489751	2380.6289619509857	2125.1022429668533	1.0390655596947032	1.3363071639406534	1.1145085995115158	1.1093417927165512	1.2161231500005536	1.2310007909858356	1.0464948758648216	0.9400709476927089	1.120242082389124	1.0	11.053316538558448	-8.86569947144296	5.909993362082157	1.0175930745869397	1.177574479404104	0.4140191323249295	0.08626740350322963	0.19748140300323383	9.681655673726901	0.03519715199082926	0.02361777385665066	1.3623871181197439e-09	8.86569947144296	0.15998140481716439	
DYDDMS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	DYDDMSPR	8	0	Q5T6W2;P61978-3;P61978;P61978-2	Q5T6W2	HNRNPK	Heterogeneous nuclear ribonucleoprotein K	1	DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR	106.68	0.010448	1581563300.0	30622.5	27278.5	38257.4	33946.2	25857.9	25132.7	24952.1	29887.0	30523.1	34181.6	True	False	29276.371566346188	31785.80846977967	30227.69455830475	30970.18935087555	29258.667085438163	29989.238577503238	30548.243597073666	28835.857269887143	29104.087743231492	27990.981013523873	1.0459215971102005	1.1355732210465335	1.0799083656160606	1.1064345810499556	1.0452890904860321	1.071389336551438	1.0913602342952629	1.0301838744399514	1.0397666208686942	1.0	14.772674430181043	-9.639858112311792	0.5333022206598427	0.997955512003625	1.0921228556547107	0.5113990837541644	0.026598760689643893	0.6464001801477561	0.4517831118965059	0.026993450800838346	0.01463647364976877	2.2916162209218686e-10	9.639858112311792	0.0941673436510857	
DYDDMSPR	ddPTM_K562_Methotrexat_30min_R1	2	DYDDMSPR	8	0	Q5T6W2;P61978-3;P61978;P61978-2	Q5T6W2	HNRNPK	Heterogeneous nuclear ribonucleoprotein K	0	;	101.6	0.032827999999999996	40106000.0	6476.1	5531.299999999999	8298.3	6858.1	5627.6	5170.0	4927.9	5884.8	6502.9	7234.4	False	True	6191.4183982631885	6445.253308975649	6556.600232979255	6256.861020887158	6367.728040173866	6169.029330143275	6033.107017927119	5677.828248463609	6200.581598378282	5924.180057230703	1.0451097600766388	1.0879570247209072	1.1067523555393388	1.0561564571708795	1.0748707802021977	1.0413304914008688	1.018386841663171	0.9584158809510843	1.046656505791079	1.0	12.532399774668681	-8.575439439240137	1.9046412313429113	1.000327203366178	1.0765534414516724	0.6159945502196036	0.025475664198517944	0.21362871348543377	1.5709056818402107	0.011644909667303466	0.008508743996592362	2.6580341767512934e-09	8.575439439240137	0.07622623808549434	
DYEIESQNPLAS(ph)PTNTLLGSAK	ddPTM_K562_Methotrexat_30min_R1	2	DYEIESQNPLASPTNTLLGSAK	22	0	Q7Z417	Q7Z417	NUFIP2	Nuclear fragile X mental retardation-interacting protein 2	1	DYEIESQNPLAS(0.969)PT(0.028)NT(0.003)LLGSAK;DYEIESQNPLAS(0.976)PT(0.023)NT(0.001)LLGSAK	118.42	3.768e-06	53223000.0	12834.6	8551.8	19439.7	12516.099999999999	9223.7	8830.9	7179.799999999999	11666.1	12008.6	15803.900000000001	True	False	12270.406351716108	9964.839594254137	15359.572629218857	11418.832945498869	10436.77822235974	10537.346443242202	8790.052916518829	11255.79665059158	11450.322807099217	12941.660567077897	0.948132296324524	0.7699815292330837	1.1868316704497606	0.8823313581988909	0.8064481500086402	0.8142190400239676	0.6792059543641344	0.8697335702981608	0.8847645746657525	1.0	13.65973512347833	-7.515930475725115	24.521202825823483	0.8279568825633145	0.9628317429005517	0.17326399831589478	0.12038798881015395	395.3710588120402	1395310.209476678	0.03475394366713608	0.04672519335842952	3.048382952657896e-08	7.515930475725115	0.13487486033723728	
DYEKVY(ph)QT(ph)EKT(ph)KEHK	ddPTM_K562_Methotrexat_30min_R1	1	DYEKVYQTEKTKEHK	15	3	K7ER44;A0A6I8PRZ0;A0A6I8PR89;A0A6I8PIK4;A0A6I8PS32;A0A6I8PUD4;A0A6I8PU73;Q99615-2;Q99615	K7ER44	DNAJC7	DnaJ homolog subfamily C member 7	3	DY(0.457)EKVY(0.543)QT(1)EKT(1)KEHK	53.754	0.028348	7945000.0	2078.6	1876.6	1982.4	2840.5	2096.5	1863.1	2540.2	2502.8	2553.1	2851.5	True	False	1987.2272328453637	2186.6762532539733	1566.3213310989076	2591.477775160754	2372.226497303381	2223.117706961301	3109.9045124573304	2414.7751053994552	2434.406938261328	2335.065718400054	0.8510369610526324	0.9364516964225938	0.67078254747028	1.1098093534328402	1.0159142325676338	0.9520578754779297	1.3318274033795428	1.0341358216907133	1.0425432222649995	1.0	11.189247438569463	-7.281292349985362	24.86629602422976	1.0746999742965504	0.8311265211338245	0.49884013359911594	0.11458780792121735	619.9093038683319	776448.7512120465	0.0324128857613928	0.048151793514984526	5.2324808794672857e-08	7.281292349985362	-0.24357345316272594	
DYEPPS(ph)PSPAPGAPPPPPQR	ddPTM_K562_Methotrexat_30min_R1	2	DYEPPSPSPAPGAPPPPPQR	20	0	A8MQ02;J3KN01;P55196;P55196-5;P55196-1;H0Y8L4	A8MQ02	MLLT4	Afadin	1	DYEPPS(0.786)PS(0.214)PAPGAPPPPPQR;DYEPPS(0.91)PS(0.09)PAPGAPPPPPQR	250.38	7.726499999999998e-85	10760000.0	2267.3999999999996	1560.4	1578.8600000000001	1940.0700000000002	1129.87	1060.25	1307.23	1400.9	1741.1	1932.1399999999999	True	False	2167.7278109081008	1818.2295777349987	1247.478862398518	1769.9870752529926	1278.4677092812656	1265.12830701826	1600.409603897172	1351.629552962322	1660.1566410273008	1582.2107231805994	1.3700626466179424	1.149170303990829	0.7884404043797687	1.1186797367261678	0.8080261943309662	0.7995953310663119	1.0115021851703727	0.8542664596819585	1.049263929705907	1.0	10.627726039366822	-6.5187887012690275	3.8938505952361124	0.9245970981803099	1.341596888288267	0.6167455218472779	0.11050002293949047	0.12745647686943598	4.23391018699642	0.027273664477454322	0.10452305006862589	3.0283864806203293e-07	6.5187887012690275	0.41699979010795707	
DYFEEYGKIDTIEIITDR	ddPTM_K562_Methotrexat_30min_R1	1	DYFEEYGKIDTIEIITDR	18	1	P22626;P22626-2;A0A087WUI2	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	0		132.51	1.8975e-06	8248600.0	1439.3	871.24	1820.7	1092.8	819.03	863.12	803.49	1388.3	1355.0	2154.3	False	True	1376.0300953691594	1015.1976014520898	1438.559951337662	996.995920681455	926.7468008997798	1029.905724455176	983.6930858650259	1339.4727021040696	1292.0063457538292	1764.1353944061852	0.7800025438706968	0.5754646750306879	0.8154475874692638	0.5651470538161544	0.5253263461740851	0.5838019733184063	0.5576063430188932	0.7592799885719324	0.732373688465518	1.0	10.7847455742097	-10.151912416567432	1.2634540303379074	0.9968356193786571	0.6295145845490806	0.5609145963425538	0.09628977140981215	0.48815815069465196	1.6076474091915918	0.09309862573097932	0.028450746173912217	7.048351975557072e-11	10.151912416567432	-0.36732103482957645	
DYFEQYGK	ddPTM_K562_Methotrexat_30min_R1	1	DYFEQYGK	8	0	F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;A0A2R8Y4L2;F8VZ49;F8VYN5;Q32P51	F8W6I7	HNRNPA1;HNRNPA1L2	Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2	0		109.71	0.00059091	0.0	1293.1	874.32	1482.3	954.76	731.57	842.29	875.17	1184.1	1309.8	1339.5	False	True	1236.256872314221	1018.7865191010407	1171.185486828043	871.0576731605287	827.7842779071003	1005.0506217575196	1071.4491505264475	1142.4545318457303	1248.907683888092	1096.903569979615	1.1270424366812808	0.9287840307785432	1.0677196418002435	0.7941059697496623	0.7546554688690492	0.9162616015336678	0.9767942960987532	1.041526860804147	1.1385756397085132	1.0	10.099220987042134	-9.168860916223295	2.60776568832711	1.0723056962740691	0.924339590847602	0.21708020013253804	0.10850716781789177	0.45082507939805	5.910598478202392	0.06874364672870426	0.03337705926122939	6.778585585689219e-10	9.168860916223295	-0.14796610542646715	
DYGHSSSRDDYPSR	ddPTM_K562_Methotrexat_30min_R1	3	DYGHSSSRDDYPSR	14	1	P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39	P38159;Q96E39	RBMX;RBMXL1	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1	0	;;	136.01	9.4956e-05	23012400.0	8694.3	7440.05	10323.3	9431.6	7022.1	7573.0	7850.2	8917.1	8684.9	9869.5	False	True	8312.108982260876	8669.391803273054	8156.5804062416055	8604.746271503673	7945.629232871008	9036.375071020308	9610.8071819906	8603.48053873961	8281.140894640173	8082.037912589634	1.0284669624368938	1.0726739835962018	1.009223229890552	1.0646753163703675	0.9831219945768704	1.1180812523712707	1.1891564090561313	1.0645187057756447	1.0246352447493956	1.0	12.980503403837105	-8.277089436325415	24.961148289790255	1.0901781208416335	1.0345031627389192	0.14658035751588083	0.05417062165344524	1411.6858947267845	2251571.1711563743	0.01945392967210999	0.017213180693833614	5.283364377392205e-09	8.277089436325415	-0.05567495810271428	
DYLHYIR	ddPTM_K562_Methotrexat_30min_R1	2	DYLHYIR	7	0	P62280;M0QZC5;M0R1H5	P62280	RPS11	40S ribosomal protein S11	0	;	105.2	0.016531	94359000.0	13945.3	9993.7	11582.3	13655.900000000001	10572.4	9326.5	10391.1	15284.9	15112.2	16971.5	False	True	13332.281309630742	11644.989061144744	9151.333511494591	12458.708449152522	11962.855912277739	11128.71412912596	12721.568687266892	14747.321403436214	14409.63712051735	13897.796892802562	0.9593089762691315	0.8379018020601158	0.6584736834248825	0.896452045259395	0.8607735459476389	0.8007538327811752	0.915365851536885	1.0611265596400827	1.0368288752284083	1.0	13.762568581653689	-9.05665874189687	3.4354742751457206	1.0355782738467731	0.8320636914265581	0.5853648119754569	0.07396892440026782	0.17623735774234217	4.116989042572342	0.03862624409056956	0.021782181694110097	8.776902180042216e-10	9.05665874189687	-0.20351458242021503	
DYLLCDYNRDGDSYR	ddPTM_K562_Methotrexat_30min_R1	1	DYLLCDYNRDGDSYR	15	1	B1AK87;B1AK85;P47756-2;P47756;A0A6I8PRV6;B1AK88	B1AK87	CAPZB	F-actin-capping protein subunit beta	0		126.09	0.00131	49908000.0	1671.6	1343.7	1502.5	1449.4	1531.5	1345.3	1385.3	2254.0	1767.2	2408.7	False	True	1598.1184655173238	1565.7235860052033	1187.1457828773757	1322.3333523386723	1732.919094023434	1605.2601852691964	1695.9887887202337	2174.7255424206387	1685.0432577241072	1972.4610892197818	0.8102154583690513	0.7937918748118545	0.6018601783150804	0.6703976872171044	0.8785567956166375	0.8138361735207492	0.8598338380358579	1.1025442044491047	0.854284663425546	1.0	10.945781125106977	-8.587757175158561	1.1235041481221333	0.9837425701819027	0.7268595533267267	0.5507479144901171	0.09135617775170826	0.3774366388017674	0.9714423626082417	0.058750585091260264	0.03915625597980298	2.5837044002115554e-09	8.587757175158561	-0.256883016855176	
DYSDHPSGGSYRDS(ph)YESYGNSR	ddPTM_K562_Methotrexat_30min_R1	2	DYSDHPSGGSYRDSYESYGNSR	22	1	P38159;P38159-2;H3BUY5;Q96E39	P38159;Q96E39	RBMX;RBMXL1	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1	1	DYSDHPS(0.002)GGS(0.086)Y(0.336)RDS(0.45)Y(0.114)ES(0.01)Y(0.001)GNSR;DYSDHPS(0.004)GGS(0.006)Y(0.019)RDS(0.557)Y(0.079)ES(0.324)Y(0.011)GNSR	107.18	2.6928e-05	75884000.0	3327.7	2941.7	3865.3	4139.700000000001	3174.2	2743.6	3115.8999999999996	3087.53	2988.21	4126.1	True	False	3181.4182924754714	3427.765924649479	3054.0263524498628	3776.778928298882	3591.662937152583	3273.7618704412143	3814.719892278477	2978.939819871338	2849.288769332138	3378.8233072735266	0.9415758100244233	1.0144851070698473	0.9038727612288929	1.1177793524061126	1.062992234432881	0.9689059097567639	1.1290083988904078	0.8816500742902514	0.8432784168377583	1.0	11.72230519261116	-9.297948511844123	24.982057874525236	0.8968481304886711	1.0186113315218865	0.3022879321048544	0.07701918743970776	686.2459005923982	469572.7943386841	0.041351020967924215	0.019865286994651694	5.035603052742997e-10	9.297948511844123	0.12176320103321547	
DYSDHPSGGSYRDSY(ph)ESYGNSR	ddPTM_K562_Methotrexat_30min_R1	1	DYSDHPSGGSYRDSYESYGNSR	22	1	P38159;P38159-2;H3BUY5;Q96E39	P38159;Q96E39	RBMX;RBMXL1	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1	1	DYSDHPSGGS(0.002)Y(0.002)RDS(0.329)Y(0.42)ES(0.192)Y(0.055)GNSR	79.462	0.0064313	29150000.0	1372.5	1205.5	1563.2	1615.1	1232.2	1010.9	1347.9	1363.0	1340.4	1471.6	True	False	1312.1665433850967	1404.6883850035517	1235.1056823919557	1473.5066906045183	1394.255897914251	1206.2421179578018	1650.200886678701	1315.0625174442464	1278.0850965671088	1205.0789799044426	1.0888635228615022	1.1656401019582445	1.0249167921673434	1.2227469860285514	1.1569830037403932	1.0009651965329704	1.3693715633555856	1.0912666633256893	1.0605820181748216	1.0	10.234911987285367	-9.798453756459752	2.9549966459358328	1.0114593127009812	1.1448882634870063	0.18182897533079057	0.09871162847776607	0.41327431681580645	6.809562777506835	0.08946858386780056	0.02491536094906171	1.5905460356491575e-10	9.798453756459752	0.13342895078602512	
DYTGCSTSESLS(ph)PVK	ddPTM_K562_Methotrexat_30min_R1	1	DYTGCSTSESLSPVK	15	0	O95297-4;O95297-2;O95297	O95297-4	MPZL1	Myelin protein zero-like protein 1	1	DYTGCSTSES(0.02)LS(0.98)PVK	162.41	3.6060000000000003e-06	11039000.0	942.51	619.0	1562.3	1087.2	749.95	669.01	690.86	896.14	886.4	1013.2	True	False	901.078388929609	721.2792287990027	1234.3945800927274	991.8868639868941	848.5815700704371	798.2867141507057	845.8029412944927	864.6222482630124	845.1914574732056	829.6996618912628	1.0860295963911104	0.8693256872672207	1.4877607365525265	1.195477001552505	1.022757521843668	0.9621393750252317	1.019408564499741	1.0420906358960604	1.0186715703205542	1.0	9.696445388024895	-7.7927220977489196	9.007178550097015	1.010697695896497	1.1623202324856703	0.20788208892482363	0.14227169223264158	0.482226569266018	128.386364095114	0.04622627487575455	0.05299013116300711	1.6116766068018016e-08	7.7927220977489196	0.15162253658917324	
DYTGCSTSESLS(ph)PVKQAPR	ddPTM_K562_Methotrexat_30min_R1	2	DYTGCSTSESLSPVKQAPR	19	1	O95297-4;O95297-2;O95297	O95297-4	MPZL1	Myelin protein zero-like protein 1	1	DYTGCSTSES(0.014)LS(0.985)PVKQAPR;DYTGCST(0.001)S(0.004)ES(0.186)LS(0.809)PVKQAPR	124.82	2.7089e-05	167112000.0	1998.37	1519.54	3184.1000000000004	2305.6000000000004	1699.39	1628.35	1377.0900000000001	1842.0700000000002	2042.5700000000002	2747.9	True	False	1910.5240475806738	1770.6181572362464	2515.8009233010653	2103.4716276749286	1922.8895717874523	1943.0055918256858	1685.9374872292988	1777.2833540047845	1947.6113665287085	2250.2286823045783	0.8490355058597888	0.7868614293116478	1.118020111949022	0.9347812709953781	0.8545307358797504	0.8634702806453213	0.7492294007658995	0.7898234379381275	0.8655170835943912	1.0	11.135855909243057	-7.851772366071848	4.426553216519276	0.8365688042238236	0.9263396252630303	0.0876783893373968	0.1001956919229671	0.446647805574373	15.750986799073926	0.03263411520994341	0.03778023173312771	1.406784692179075e-08	7.851772366071848	0.08977082103920664	
DYTYEELLNR	ddPTM_K562_Methotrexat_30min_R1	4	DYTYEELLNR	10	0	P20042	P20042	EIF2S2	Eukaryotic translation initiation factor 2 subunit 2	0	;;;	155.84	1.4587999999999998e-07	66764000.0	5285.77	4034.5899999999997	5883.15	4343.39	4691.62	3935.94	3944.11	5343.299999999999	5747.23	6252.1	False	True	5053.413879802293	4701.2374211957485	4648.357213001685	3962.6117422480124	5308.650264382778	4696.504700519173	4828.677067407323	5155.373110388728	5480.042531739319	5119.78410591232	0.9870365185841757	0.9182491534685545	0.9079205522814463	0.773980242188727	1.0368894770879802	0.9173247549824718	0.943140758968952	1.0069512705497305	1.0703659409018778	1.0	12.321867259751293	-9.273126465352423	2.4562099616449546	1.0368573705683835	0.9210316658351063	0.33603939981172226	0.06500685405886557	0.34943023611010005	4.060772098864928	0.04367026880016581	0.01871262341409527	5.331796124506753e-10	9.273126465352423	-0.11582570473327714	
DYTYRDYGHSSSRDDYPSR	ddPTM_K562_Methotrexat_30min_R1	2	DYTYRDYGHSSSRDDYPSR	19	2	P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39	P38159;Q96E39	RBMX;RBMXL1	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1	0	;	57.93600000000001	0.016856	47193000.0	3975.1	3265.2	4417.0	5497.0	3117.2	3217.5	3686.7	2895.3	3014.4	4612.0	False	True	3800.3593636503456	3804.7188010896703	3489.9320618764514	5015.086544643082	3527.166438060626	3839.2363384402297	4513.536322366914	2793.4706579283365	2874.261201948591	3776.7221088062583	1.0062586693336457	1.0074129606248052	0.9240637678210178	1.327893977941693	0.9339226812150838	1.0165525097777794	1.195093573827582	0.7396548057943542	0.761046515772664	1.0	11.882918918851527	-9.271211105276821	24.97535449327776	0.8127629860539011	1.0555169366597374	0.3751429247629664	0.13231466785887144	686.2184942544596	1753880.9140182927	0.06951203783382601	0.03405297602484514	5.355362765499815e-10	9.271211105276821	0.24275395060583638	
EAAFS(ph)PGQQDWSR	ddPTM_K562_Methotrexat_30min_R1	1	EAAFSPGQQDWSR	13	0	Q9C0C2;Q9C0C2-2	Q9C0C2	TNKS1BP1	182 kDa tankyrase-1-binding protein	1	EAAFS(0.995)PGQQDWS(0.005)R	99.941	0.0059623	9611000.0	2199.7	2019.1	2363.3	2334.4	1789.0	1941.0	1933.6	1624.0	2036.0	2100.2	True	False	2103.003821846409	2352.7219561681227	1867.2756264053924	2129.746776389815	2024.28485746518	2316.0707794599793	2367.25902105641	1566.8829995080378	1941.3468043946832	1719.833428645903	1.2227950607415465	1.3679940841832103	1.085730510469015	1.2383447960228646	1.1770237883205843	1.3466831966881345	1.3764466846770458	0.9110667192588008	1.1287993197824902	1.0	10.748053126738524	-9.26380178979012	24.999997437591464	1.0149497627174848	1.2561857979751072	0.5698141701705057	0.0979210700655204	159.69104907801895	1689889.0904970071	0.05077658338708095	0.02618458202589636	5.447512183246747e-10	9.26380178979012	0.24123603525762238	
EAALPPVS(ph)PLK	ddPTM_K562_Methotrexat_30min_R1	4	EAALPPVSPLK	11	0	Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6	Q04637-9	EIF4G1	Eukaryotic translation initiation factor 4 gamma 1	1	EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK	128.68	0.0011378	222614900.0	32159.5	23643.0	45868.1	31021.8	25027.7	21840.5	19215.1	29365.699999999997	29185.0	35353.0	True	False	30745.806886698007	27549.603887713787	36241.012634674065	28302.16695845166	28319.281233751404	26060.867521275453	23524.575307975305	28332.891686362775	27828.1957201664	28950.229122425786	1.0620229206711636	0.9516195457801393	1.2518385426732461	0.9776146101906974	0.9782057721890143	0.9001955532396066	0.8125868437342489	0.9786759050005307	0.9612426762664126	1.0	14.821287145811608	-7.507065268747536	23.59517203207297	0.9336362701581143	1.0814596558873482	0.386266745933184	0.08439059108366437	353.4447912742226	527372.0969968521	0.024354195669103504	0.034881803042133376	3.1112487222138845e-08	7.507065268747536	0.1478233857292338	
EAALPPVS(ph)PLKAALSEEELEK	ddPTM_K562_Methotrexat_30min_R1	1	EAALPPVSPLKAALSEEELEK	21	1	Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6	Q04637-9	EIF4G1	Eukaryotic translation initiation factor 4 gamma 1	1	EAALPPVS(1)PLKAALSEEELEK	64.26	0.010304	3733200.0	1240.1	671.55	1588.0	1267.1	785.67	539.52	706.64	926.98	1025.1	1400.7	True	False	1185.586688853813	782.5122231017294	1254.700501304008	1156.0153102996633	888.999376168065	643.7746042937907	865.1220079847443	894.3775879827344	977.4433247470478	1147.01965693949	1.0336236887319166	0.6822134375531544	1.093878813421415	1.0078426322563432	0.7750515614877238	0.5612585629190768	0.7542346835564153	0.7797404190693102	0.8521591751575465	1.0	10.163674400275738	-6.225600857127657	21.390191983071063	0.8278482963594507	1.0336267510997463	0.13067332018130495	0.1536873046894915	5060.425208852396	3019934.797860128	0.040934507375201316	5.590448478533695	5.948386000890307e-07	6.225600857127657	0.20577845474029566	
EAALPPVS(ph)PLKAALSEEELEKK	ddPTM_K562_Methotrexat_30min_R1	1	EAALPPVSPLKAALSEEELEKK	22	2	Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6	Q04637-9	EIF4G1	Eukaryotic translation initiation factor 4 gamma 1	1	EAALPPVS(1)PLKAALSEEELEKK	57.17100000000001	0.013343	5703800.0	3235.5	1732.8	6431.1	3073.3	2029.3	1544.7	1451.7	2097.7	2253.2	4466.6	True	False	3093.2712940783126	2019.1157474360461	5081.299996181491	2803.868560606072	2296.1885194265465	1843.1914132054758	1777.280678975792	2023.9227020123224	2148.4492238026037	3657.655457761069	0.8456978328876749	0.5520245880873621	1.3892232482968383	0.7665753630940355	0.6277760565321517	0.5039270195049299	0.485907078865133	0.5533388055230357	0.5873842543708905	1.0	11.836703467788599	-7.6260677994322394	4.2427990839873155	0.5917604054429096	0.9167360718378688	0.23771435507403238	0.235337560963508	0.28425802577643783	9.211573516230594	0.06999114235868617	0.09182848314468788	2.3655503732171257e-08	7.6260677994322394	0.3249756663949591	
EAARS(ph)PDKPGGS(ph)PSASR	ddPTM_K562_Methotrexat_30min_R1	2	EAARSPDKPGGSPSASR	17	2	Q9Y3T9	Q9Y3T9	NOC2L	Nucleolar complex protein 2 homolog	2	EAARS(1)PDKPGGS(0.576)PS(0.156)AS(0.268)R;EAARS(1)PDKPGGS(0.966)PS(0.033)AS(0.001)R	90.882	0.010291	63321000.0	12604.2	9159.3	18591.2	13665.099999999999	9557.8	8297.3	8088.3	11101.0	11401.400000000001	15470.4	True	False	12050.134459842948	10672.718643519725	14689.161183780272	12467.101899436453	10814.818228440858	9900.635795163984	9902.307167982288	10710.571537893306	10871.351402566572	12668.56064875897	0.951184179003271	0.8424570824914699	1.1594972460600126	0.9840977396795071	0.8536737935970881	0.7815122861754515	0.7816442169341733	0.8454450221180042	0.8581362716712055	1.0	13.628965000093094	-7.779502295035381	5.605322221783537	0.8375196187096129	0.9873221909233064	0.3184057409436013	0.09227845640337709	0.1896629152065243	18.068879454429112	0.028787039670800967	0.034225847759869255	1.6614898975764062e-08	7.779502295035381	0.14980257221369353	
EAASS(ph)PAGEPLR	ddPTM_K562_Methotrexat_30min_R1	1	EAASSPAGEPLR	12	0	Q96EB6;Q96EB6-2	Q96EB6	SIRT1	NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment	1	EAAS(0.025)S(0.975)PAGEPLR	114.24	0.00022585	0.0	2485.8	1762.4	2993.9	2251.8	2036.6	2048.8	1833.9	2460.9	2394.2	2412.3	True	False	2376.527208412877	2053.6066443220734	2365.521304064277	2054.38819014504	2304.4485973804285	2444.7016037906265	2245.198758127509	2374.348752148601	2282.8941645784635	1975.4090943350686	1.203055719054906	1.0395854965997948	1.1974842633092777	1.039981134052922	1.166567777777755	1.2375672516651666	1.136574071956094	1.2019529316522748	1.1556564010589896	1.0	10.947935741623283	-5.335764097454624	12.693670104709767	1.1432079843471412	1.1493810020889528	0.0	0.07844035132399588	0.0	0.0	0.01692007652019057	0.0	4.615682237311922e-06	5.335764097454624	0.0061730177418115595	
EAASSSSGTQPAPPAPAS(ph)PWDSKK	ddPTM_K562_Methotrexat_30min_R1	2	EAASSSSGTQPAPPAPASPWDSKK	24	1	Q9H7N4	Q9H7N4	SCAF1	Splicing factor, arginine/serine-rich 19	1	EAASSSSGTQPAPPAPAS(1)PWDSKK;EAASSSSGT(0.002)QPAPPAPAS(0.993)PWDS(0.005)KK	170.53	3.2394e-25	38483000.0	7642.9	5447.3	13504.099999999999	8439.7	4851.4	4712.700000000001	4399.2	6525.0	6394.2	9743.1	True	False	7306.927267350063	6347.373736731522	10669.773954445498	7699.804604479576	5489.444134995288	5623.362577208167	5385.8325845218005	6295.512051594789	6096.9350376524935	7978.530177430679	0.9158237300423557	0.7955567749416675	1.3373107222966572	0.9650655488225701	0.6880269940600826	0.7048118453089632	0.6750406985683918	0.7890566196519831	0.7641676978172295	1.0	12.961907279099446	-7.670390374731845	5.798891982103918	0.7522232819957126	1.0178406253722416	0.35285372412913985	0.15425745225099105	0.21873492970344374	11.182478186254434	0.046281752979056984	0.059762199102266426	2.1360412007441207e-08	7.670390374731845	0.265617343376529	
EAATQEDPEQLPELEAHGVS(ph)ES(ph)EGEERPVAEEEILLR	ddPTM_K562_Methotrexat_30min_R1	3	EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR	37	1	X6RJY0;Q9BVJ6-2;Q9BVJ6-3;Q9BVJ6	X6RJY0	UTP14A	U3 small nucleolar RNA-associated protein 14 homolog A	2	EAATQEDPEQLPELEAHGVS(1)ES(1)EGEERPVAEEEILLR;EAAT(0.006)QEDPEQLPELEAHGVS(0.997)ES(0.997)EGEERPVAEEEILLR;EAATQEDPEQLPELEAHGVS(1)ES(1)EGEERPVAEEEILLR	72.633	4.5967000000000004e-08	80111000.0	3905.7999999999997	3212.5699999999997	3640.25	3467.38	3037.54	2899.5699999999997	2885.84	3724.63	4290.66	4248.95	True	False	3734.105708672868	3743.3925881467076	2876.2112719596444	3163.4001788547416	3437.0297517857916	3459.8708655325972	3533.063080950265	3593.63265175962	4091.1881531159597	3479.4239818326896	1.0731965199325986	1.0758656052531372	0.8266343184898899	0.9091735285414998	0.9878157332166895	0.9943803582425752	1.015416085937685	1.0328240164243434	1.1758234048157132	1.0	11.76463277253576	-9.144105750691956	1.7222719471057935	1.0852071750564334	0.9717939633656819	0.21344564989949744	0.07981760486550123	0.5950221292886608	3.3186706929889125	0.05987077103990324	0.026095611369636236	7.176195296633024e-10	9.144105750691956	-0.11341321169075147	
EAATQEDPEQLPELEAHGVS(ph)ESEGEERPVAEEEILLR	ddPTM_K562_Methotrexat_30min_R1	2	EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR	37	1	X6RJY0;Q9BVJ6-2;Q9BVJ6-3;Q9BVJ6	X6RJY0	UTP14A	U3 small nucleolar RNA-associated protein 14 homolog A	1	EAATQEDPEQLPELEAHGVS(0.5)ES(0.5)EGEERPVAEEEILLR;EAATQEDPEQLPELEAHGVS(0.5)ES(0.5)EGEERPVAEEEILLR	70.833	7.4162e-06	165096000.0	2138.35	1881.26	2259.1	1795.4699999999998	1530.1100000000001	2022.05	2014.57	2420.1000000000004	2141.3599999999997	2415.56	True	False	2044.350694387994	2192.1062390475167	1784.9457824281385	1638.0639327470096	1731.3462846596117	2412.7825448774074	2466.3886047008737	2334.983711274262	2041.8086409914529	1978.0786767450236	1.033503226348925	1.1081997216888666	0.9023633910079402	0.8281085843574653	0.8752666438468383	1.2197606562584757	1.2468607208078173	1.1804301510982032	1.0322181139687014	1.0	10.94988409412237	-8.2627926919929	24.99925203753622	1.1540687401125727	0.9489442426937055	0.44339175523064267	0.10340088097473844	119.06138794776597	2199365.674456588	0.038495861307477945	0.03583742216673095	5.460184376975081e-09	8.2627926919929	-0.20512449741886718	
EAATQEDPEQLPELEAHGVS(ph)ESEGEERPVAEEEILLREFEER	ddPTM_K562_Methotrexat_30min_R1	1	EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLREFEER	42	2	X6RJY0;Q9BVJ6-2;Q9BVJ6-3;Q9BVJ6	X6RJY0	UTP14A	U3 small nucleolar RNA-associated protein 14 homolog A	1	EAATQEDPEQLPELEAHGVS(0.5)ES(0.5)EGEERPVAEEEILLREFEER	43.905	0.0024886999999999995	29262000.0	423.53	280.82	320.59	527.65	310.18	313.4	389.54	328.2	370.68	402.72	True	False	404.9121283205028	327.2207318761489	253.30254012156925	481.3917437294745	350.9741068130516	373.96011451971026	476.90426099623215	316.657019974469	353.4471677077708	329.7835055634122	1.2278119478072094	0.9922289209616928	0.7680873538196505	1.4597205002932157	1.064256097992035	1.1339563932429715	1.446113140745091	0.9601966582090954	1.0717551416161064	1.0	8.36537543258601	-5.89467462993535	12.042861133513275	1.1100334774847032	3.413874556356886	0.033007768401402626	0.20117832383581175	6152447.710017187	14200395.775410725	0.05027133164114131	365418748.0297858	1.2744575371597039e-06	5.89467462993535	2.303841078872183	
EAAVSASDILQESAIHS(ph)PGTVEK	ddPTM_K562_Methotrexat_30min_R1	2	EAAVSASDILQESAIHSPGTVEK	23	0	F5H3K2;F5H8B7;E7ENF1;G5EA44;F5H7W8;Q96C57	F5H3K2	C12orf43	Uncharacterized protein C12orf43	1	EAAVSASDILQESAIHS(0.998)PGT(0.002)VEK;EAAVSASDILQESAIHS(1)PGTVEK	237.2	1.2696999999999998e-64	121855000.0	6578.9	4162.2	8596.3	6220.2	4091.5	4393.6	3944.8999999999996	5694.6	5529.1	7768.3	True	False	6289.699433352435	4849.932804696624	6792.054105390206	5674.884723483515	4629.603965521961	5242.601018359281	4829.644245017293	5494.317690269993	5272.053347828411	6361.385593633929	0.9887310462121284	0.7624019536797343	1.0677004255467966	0.8920831224509609	0.72776660011853	0.8241287909988892	0.7592126234024383	0.8636982634362486	0.8287586517478751	1.0	12.635125322395847	-6.229112036384695	21.957463234308065	0.853495048291875	0.9887323027992132	0.12716243630161117	0.10169062636819533	5181.231954293216	3518902.954190431	0.025516517552567307	2.6710288295651856	5.900488436833762e-07	6.229112036384695	0.13523725450733826	
EADDDEEVDDNIPEMPS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	EADDDEEVDDNIPEMPSPK	19	0	P26358-3;P26358;P26358-2	P26358-3	DNMT1	DNA (cytosine-5)-methyltransferase 1	1	EADDDEEVDDNIPEMPS(1)PK	107.51	0.004333699999999999	12643000.0	2598.9	1809.0	3870.2	2746.5	1832.1	1692.2	1736.4	2286.0	2385.5	3601.9	True	False	2484.655467834993	2107.9065022575055	3057.897909412327	2505.7186092163392	2073.0532629189242	2019.1937006708795	2125.831901201051	2205.6000842828644	2274.5986256795254	2949.561006875383	0.8423814466096133	0.7146509251186894	1.0367298395538902	0.8495225572129365	0.7028345093004239	0.6845743132500629	0.7207282359123166	0.7477723224376926	0.7711651396182244	1.0	11.526284533939247	-7.67047098106835	7.156117711192043	0.7519524503844391	0.864379802830139	0.12281322842530473	0.11069379846204451	0.38586356584159925	25.854609844492316	0.0320619298931215	0.041388708725104514	2.1356447819878076e-08	7.67047098106835	0.1124273524456999	
EADIDS(ph)S(ph)DES(ph)DIEEDIDQPSAHK	ddPTM_K562_Methotrexat_30min_R1	1	EADIDSSDESDIEEDIDQPSAHK	23	0	Q9P2I0	Q9P2I0	CPSF2	Cleavage and polyadenylation specificity factor subunit 2	3	EADIDS(1)S(1)DES(0.998)DIEEDIDQPS(0.002)AHK	72.145	0.0085765	12582000.0	2347.3	1694.1	3912.1	2268.0	1830.4	1677.8	1345.5	2347.5	2441.3	3228.0	True	False	2244.115502577659	1974.0212302235714	3091.003672009705	2069.167961297162	2071.1296831214454	2002.0111044708676	1647.2626255851255	2264.937094424335	2327.804495858911	2643.3779200404624	0.8489574969829922	0.7467797984002813	1.1693385378517465	0.782774171490957	0.7835162983769428	0.7573684751214925	0.6231657657032675	0.8568343849939042	0.8806173639459315	1.0	11.368166984477536	-5.921570306364055	19.491984809008677	0.8344094066214406	1.3407912921150584	0.0	0.14343300100591516	5427.965358862437	1960655.7249219706	0.035355727393755344	293961.2636820342	1.197925179714232e-06	5.921570306364055	0.5063818854936178	
EADLPMTAASHSSAFT(ph)PVTAAASPVSLPR	ddPTM_K562_Methotrexat_30min_R1	1	EADLPMTAASHSSAFTPVTAAASPVSLPR	29	0	Q9Y4B6-3;Q9Y4B6-2;Q9Y4B6	Q9Y4B6-3	VPRBP	Protein VPRBP	1	EADLPMT(0.015)AAS(0.009)HS(0.006)S(0.006)AFT(0.699)PVT(0.109)AAAS(0.13)PVS(0.027)LPR	65.035	0.0024671	23533000.0	413.99	447.97	509.82	364.26	389.84	363.76	304.75	578.71	373.78	637.35	True	False	395.79149529762947	521.9894283119376	402.81574910252505	332.32589135013416	441.11079308788476	434.05147178586407	373.0979451111612	558.3564412840498	356.40304938440306	521.9197389522266	0.7583378549586872	1.0001335250509031	0.7717963492072416	0.6367375413263557	0.8451697841001975	0.8316441004075429	0.7148569353980927	1.069812845946335	0.6828694582425557	1.0	9.027684155346835	-9.229500974748548	24.998967300624958	0.9072560936746944	0.7985196092570324	0.16070746972528016	0.12837396747769825	1306.8717524611213	1022922.8140694192	0.05891593632217862	0.0340110715034156	5.895206539193994e-10	9.229500974748548	-0.10873648441766204	
EAEALLQSMGLTPESPIVPPPMS(ph)PSSK	ddPTM_K562_Methotrexat_30min_R1	1	EAEALLQSMGLTPESPIVPPPMSPSSK	27	0	E9PGG1;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E7ETL8	E9PGG1	DYNC1I2	Cytoplasmic dynein 1 intermediate chain 2	1	EAEALLQSMGLTPESPIVPPPMS(0.824)PS(0.074)S(0.102)K	68.153	0.00028007	16571000.0	2600.5	1939.7	4247.0	2823.2	2055.2	1823.3	1856.7	2127.6	2434.7	3265.3	True	False	2486.1851337507806	2260.20245573736	3355.6127386889953	2575.6944393007716	2325.4948233999107	2175.626920241824	2273.112238516465	2052.7711020648394	2321.511328418337	2673.9225285960697	0.9297895160246622	0.8452759687559342	1.2549401498370425	0.963264422119637	0.8696941659790348	0.8136462058921828	0.8501040004737728	0.7677002905325896	0.8682044089127876	1.0	11.384741951578258	-7.726823895436466	4.070831596554689	0.845550181164334	1.0095449404737058	0.2619578580240237	0.1122101923226551	0.269708119191334	9.640219991444297	0.03494442570599044	0.04406309794772186	1.875754964528726e-08	7.726823895436466	0.1639947593093718	
EAEEGEDDRDS(ph)ANGEDDS	ddPTM_K562_Methotrexat_30min_R1	2	EAEEGEDDRDSANGEDDS	18	1	G3V2D6;G3V4C1;P07910-4;P07910-2;P07910-3;G3V2Q1;P07910	G3V2D6;G3V2Q1	HNRNPC	Heterogeneous nuclear ribonucleoproteins C1/C2	1	EAEEGEDDRDS(0.977)ANGEDDS(0.023);EAEEGEDDRDS(0.989)ANGEDDS(0.011)	134.83	5.274199999999999e-07	47235000.0	3136.1	2456.4700000000003	3478.6000000000004	2322.88	2672.3	2604.48	2389.85	3735.4	3622.5	3829.8999999999996	True	False	2998.2407990601096	2862.359914649251	2748.4893978816885	2119.236716903861	3023.7542898849633	3107.7588993755403	2925.834697699452	3604.0238647551255	3454.0907656776717	3136.2679975102096	0.9559899860089521	0.9126643248987631	0.8763566761716897	0.6757192684382395	0.964124970278507	0.9909098654332787	0.9329032786809628	1.149144099807878	1.1013378857992278	1.0	11.614833129242482	-8.692330142654516	1.3060729569698337	1.084152649942605	0.8677566548254918	0.47392917553557257	0.08852321780978678	0.38949261589341966	1.3485511392409253	0.05624407284963636	0.034687125835096644	2.030812637700034e-09	8.692330142654516	-0.21639599511711327	
EAEFS(ph)DPENTR	ddPTM_K562_Methotrexat_30min_R1	2	EAEFSDPENTR	11	0	Q5T481	Q5T481	RBM20	RNA-binding protein 20	1	EAEFS(1)DPENTR;EAEFS(1)DPENTR	140.63	4.1711e-05	28303000.0	6083.200000000001	4717.9	7165.6	5552.4	4716.9	5205.4	5063.6	6008.6	6023.200000000001	6737.3	True	False	5815.789811818016	5497.452784411657	5661.638483717883	5065.629712657126	5337.255027488828	6211.269879134972	6199.24119725964	5797.2741322931	5743.182746674882	5517.109684228192	1.0541370653629858	0.9964371018628235	1.0261964702102726	0.9181673018280359	0.9674005653261678	1.125819538605727	1.1236392879738213	1.0507810183411463	1.0409767206718703	1.0	12.429696947264523	-8.249482271936094	24.94193250900337	1.074879376375802	0.9904342416360177	0.3758764986235348	0.04841028463080913	764.2885946657922	1594270.143128876	0.016758171674333484	0.016622410506880375	5.630120992905799e-09	8.249482271936094	-0.08444513473978432	
EAGELPTS(ph)PLHLLSPGTPR	ddPTM_K562_Methotrexat_30min_R1	2	EAGELPTSPLHLLSPGTPR	19	0	H7C228;Q969R5-2;Q969R5-3;Q969R5	H7C228	L3MBTL2	Lethal(3)malignant brain tumor-like protein 2	1	EAGELPT(0.251)S(0.749)PLHLLSPGTPR;EAGELPT(0.224)S(0.776)PLHLLSPGTPR	109.32	0.00033204	11003100.0	2674.5	2412.21	2862.3	1972.48	2376.94	2473.7	2017.57	2746.0	2599.21	2745.95	True	False	2556.932182355876	2810.786701940619	2261.542345643867	1799.555740872764	2689.549272835821	2951.707515275709	2470.061431067843	2649.4216235523822	2478.373294425691	2248.631846200466	1.13710574128724	1.2499986188001522	1.005741490971595	0.8002891820257237	1.1960825323097586	1.3126681987819555	1.0984730271616177	1.1782371703172017	1.1021694363234342	1.0	11.134831762079274														
EAGLSQS(ph)HDDLSNATATPSVR	ddPTM_K562_Methotrexat_30min_R1	2	EAGLSQSHDDLSNATATPSVR	21	0	O14523-2;O14523	O14523-2	C2CD2L	C2 domain-containing protein 2-like	1	EAGLS(0.003)QS(0.997)HDDLSNATATPSVR;EAGLS(0.001)QS(0.999)HDDLSNATATPSVR	160.83	7.3987999999999995e-19	85561000.0	4311.5	4050.2	5110.5	4789.7	4157.6	3682.1	3625.7	4348.5	4096.1	4504.1	True	False	4121.971622444333	4719.426708371116	4037.8758891146945	4369.794437488988	4704.397274118076	4393.613713060064	4438.855519571897	4195.560790246738	3905.6732050496385	3688.363844378639	1.1175610098029094	1.2795447812351535	1.0947607284646659	1.1847514567059059	1.2754699570347305	1.1912094084091736	1.203475499397129	1.1375127203464777	1.058917549851324	1.0	11.848765264341829	-9.762975187576847	1.8275784324347966	1.0019830858273784	1.1951714766860695	0.5882693859474415	0.05488334116514357	0.22263581664335033	1.450985578298448	0.050126283671123484	0.01477963873885748	1.7259364966125315e-10	9.762975187576847	0.1931883908586911	
EAICPDS(ph)PNLSDGT(ph)VLSMNHNT(ph)DT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	EAICPDSPNLSDGTVLSMNHNTDTPR	26	0	B3KTY4;Q9H156-2;Q9H156	B3KTY4	SLITRK2	SLIT and NTRK-like protein 2	4	EAICPDS(0.878)PNLS(0.197)DGT(0.509)VLS(0.509)MNHNT(0.923)DT(0.985)PR	41.482	0.031411	0.0	405.24	474.09	375.58	419.38	335.39	353.44	391.85	264.87	325.8	356.36	True	False	387.4261348206751	552.4253143478501	296.7508906043827	382.6136065294551	379.4996636921446	421.73727784252185	479.7323372987975	255.55437197025475	310.6536291118802	291.81975080099716	1.3276213613275119	1.8930360704905462	1.0168978960123514	1.311129920025097	1.3004591452445577	1.445197854788521	1.6439337501386087	0.8757267843208011	1.0645394229115306	1.0	8.188933720111951	-9.271869094199635	24.996551842572103	0.9775997995292164	1.4146749589868206	0.4528002000872323	0.22143414351063492	688.0607702350425	1649042.5165926472	0.12033890357569046	0.05877528339507741	5.347255130051126e-10	9.271869094199635	0.4370751594576042	
EALAEAALES(ph)PRPALVR	ddPTM_K562_Methotrexat_30min_R1	4	EALAEAALESPRPALVR	17	1	J3QRP6;O14745;O14745-2	J3QRP6	SLC9A3R1	Na(+)/H(+) exchange regulatory cofactor NHE-RF1	1	EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR	134.83	7.1365999999999996e-06	862550000.0	5567.5	4523.96	6185.9	5869.1	4538.18	4767.219999999999	4183.48	5386.1	5232.860000000001	5822.799999999999	True	False	5322.75936633627	5271.46749582801	4887.5641253252315	5354.565115365598	5135.0302148973315	5688.417795598764	5121.731883227696	5196.667810129457	4989.5854807685455	4768.234495914374	1.1162956374937174	1.105538643358423	1.025025956570111	1.122965978278463	1.076924849081404	1.192981972776893	1.0741359066162148	1.0898515613236268	1.0464220006469553	1.0	12.219239472176486	-9.94206924141291	1.7001328051071547	1.0003000937197335	1.1021275136711022	0.3997111545510428	0.04027359109770171	0.36890268199975773	2.3934505573222062	0.038459050352891974	0.0111525569721176	1.1426961353699282e-10	9.94206924141291	0.10182741995136868	
EALGLGPPAAQLT(ph)PPPAPVGLR	ddPTM_K562_Methotrexat_30min_R1	2	EALGLGPPAAQLTPPPAPVGLR	22	0	A0A087WZ13;E9PAU2;Q8IY67-2;Q8IY67	A0A087WZ13	RAVER1	Ribonucleoprotein PTB-binding 1	1	EALGLGPPAAQLT(1)PPPAPVGLR;EALGLGPPAAQLT(1)PPPAPVGLR	149.82	1.6571e-16	52873000.0	4195.4	3551.0	4956.9	3743.7999999999997	3814.0	3451.1	3642.9	4986.5	5253.8	4962.5	True	False	4010.9752394301195	4137.742393320288	3916.5144300465004	3415.586866624478	4315.607851521628	4117.976232351536	4459.913057409182	4811.121968624896	5009.5519847390915	4063.743162391818	0.9870149463553596	1.0182096229932298	0.9637701679309225	0.8405026425474559	1.0619784959494263	1.0133455948844459	1.0974889108848573	1.1839138883455396	1.2327432577679427	1.0	11.988593508117438	-8.680263599727708	1.6010874806259598	1.1551346565906564	0.9667294081972653	0.48138785051214017	0.07650255070394774	0.3069892553514246	1.6083673422909144	0.04102814369374211	0.026670130192743193	2.0880283947676068e-09	8.680263599727708	-0.18840524839339112	
EANANGSS(ph)PEPVKAVEAR	ddPTM_K562_Methotrexat_30min_R1	2	EANANGSSPEPVKAVEAR	18	1	Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3	Q3KQU3-4	MAP7D1	MAP7 domain-containing protein 1	1	EANANGS(0.358)S(0.642)PEPVKAVEAR;EANANGS(0.027)S(0.973)PEPVKAVEAR	124.45	5.1537e-05	116852000.0	4364.7	3497.8999999999996	6529.0	5643.5	3469.0	3008.2	3096.0	4189.2	4496.6	5845.7	True	False	4172.833014144215	4075.868520865965	5158.652124064152	5148.743117099001	3925.2343043860856	3589.4920756164406	3790.356810710925	4041.8634615388364	4287.554047466173	4786.987084008834	0.871703420317086	0.851447570118082	1.0776407024988397	1.0755707142596291	0.8199801327015324	0.7498436934595699	0.7918042694062823	0.8443439246036155	0.895668605789424	1.0	12.224902198122829	-7.790988683637562	24.99878935478909	0.8345456271716535	0.968441156122075	0.2716345396265768	0.09320277371323767	261.00748772225404	220811.50168959494	0.03060797615198622	0.03471107392131877	1.618122200321814e-08	7.790988683637562	0.13389552895042156	
EANNGSS(ph)PAGSLADAMSQK	ddPTM_K562_Methotrexat_30min_R1	1	EANNGSSPAGSLADAMSQK	19	0	P51692;C9J4I3	P51692	STAT5B	Signal transducer and activator of transcription 5B	1	EANNGS(0.245)S(0.699)PAGS(0.056)LADAMSQK	93.029	0.0015538	24800000.0	5314.1	3869.5	7160.2	6070.0	3717.0	3553.2	4105.9	5028.8	5024.3	6549.4	True	False	5080.498526923673	4508.869104745949	5657.371869922516	5537.852524282975	4205.8506513125085	4239.805612353013	5026.752593377902	4851.934253649025	4790.721389646467	5363.240195016418	0.9472815578247883	0.8406987083919233	1.0548421596294362	1.0325572457912306	0.7841995693611917	0.7905306229418343	0.9372603893535881	0.9046647319949415	0.8932513211133185	1.0	12.388889151187726	-5.946786461233111	22.035379457216823	0.9119426229931556	1.47315223051198	0.010098246652695986	0.08938704889015191	12101.23282464415	2299368.4523404445	0.022850157163158358	471038.30435472575	1.1303515619530812e-06	5.946786461233111	0.5612096075188243	
EANNGSSPAGS(ph)LADAMSQK	ddPTM_K562_Methotrexat_30min_R1	1	EANNGSSPAGSLADAMSQK	19	0	P51692;C9J4I3	P51692	STAT5B	Signal transducer and activator of transcription 5B	1	EANNGS(0.04)S(0.118)PAGS(0.841)LADAMS(0.002)QK	113.54	0.00030887	30162000.0	4634.9	3147.6	5806.3	4036.5	2639.4	2980.8	2635.5	3479.3	3884.6	4757.4	True	False	4431.155345672558	3667.687399947885	4587.636977784296	3682.626312070545	2986.527363216098	3556.797413402526	3226.577963381344	3356.9310469139878	3704.005793885848	3895.788759851451	1.137421872391644	0.9414492484155471	1.1775887401962795	0.9452838793577109	0.7666040299705512	0.9129851828871105	0.8282220013141512	0.8616819991651677	0.9507717235744282	1.0	11.927699737396274	-7.5122779536490105	24.004234136217747	0.8761623505053818	1.069475157242986	0.5277859284205353	0.08334576322306209	219.88103595569837	497894.8799138301	0.022512336059581656	0.031101417779293258	3.0741287059589985e-08	7.5122779536490105	0.1933128067376041	
EAPS(ph)PTLR	ddPTM_K562_Methotrexat_30min_R1	2	EAPSPTLR	8	0	P25054-2;P25054-3;P25054	P25054-2	APC	Adenomatous polyposis coli protein	1	EAPS(0.996)PT(0.004)LR;EAPS(0.95)PT(0.05)LR	117.31	0.0071796	16013300.0	5353.6	4575.1	5884.0	4992.3	4306.3	4180.1	4531.0	5071.9	4816.1	6576.2	True	False	5118.2621542196375	5331.057511596636	4649.02880961762	4554.63281004578	4872.653930521131	4987.845164977159	5547.192089577264	4893.518402219711	4592.200562202963	5385.18645531911	0.9504336008949471	0.989948547896794	0.8632995065613067	0.8457706799635569	0.9048254820793187	0.9262158713280048	1.0300835701051978	0.9086999016322335	0.8527468083611309	1.0	12.394780581800616	-8.525678151269371	24.999228388327403	0.945685001770598	0.9096446705029921	0.08064179557450268	0.058687373282821954	274.7336723459603	2453367.7071239986	0.023948946103785278	0.01865492154504845	2.9807245786759673e-09	8.525678151269371	-0.03604033126760586	
EAPSPLMIHSPQMSQFQS(ph)LTHQSPPQQNVQPK	ddPTM_K562_Methotrexat_30min_R1	1	EAPSPLMIHSPQMSQFQSLTHQSPPQQNVQPK	32	0	O60885	O60885	BRD4	Bromodomain-containing protein 4	1	EAPSPLMIHS(0.005)PQMS(0.115)QFQS(0.293)LT(0.293)HQS(0.293)PPQQNVQPK	63.728	8.4182e-05	39937000.0	2348.9	1459.1	2920.2	2253.1	1696.7	1545.2	1486.2	2280.1	2010.1	2697.8	True	False	2245.645168493445	1700.1914745405902	2307.2899268941837	2055.5742211634197	1919.8457896373234	1843.7880311290885	1819.518182195922	2199.9075906270173	1916.65088974153	2209.2022777835064	1.0164959501791306	0.7695952025933963	1.0443995781178936	0.9304599410542788	0.8690221845885048	0.8345944822123585	0.823608684679361	0.9957927405516644	0.8675760065142186	1.0	11.109309804665719	-12.593490255484197	2.7229195045279155	1.007512090874464	0.9035913858950414	0.09780703154470405	0.08567515240272475	46166437.97632721	43114197.447163254	2485141.063974139	0.02038601680191182	2.549821298968732e-13	12.593490255484197	-0.10392070497942252	
EAPSPLMIHSPQMSQFQSLTHQS(ph)PPQQNVQPK	ddPTM_K562_Methotrexat_30min_R1	1	EAPSPLMIHSPQMSQFQSLTHQSPPQQNVQPK	32	0	O60885	O60885	BRD4	Bromodomain-containing protein 4	1	EAPSPLMIHS(0.159)PQMS(0.061)QFQS(0.243)LT(0.243)HQS(0.293)PPQQNVQPK	50.294	0.001966	33194000.0	1830.6	1478.5	2877.7	2083.3	1591.1	1243.3	1222.8	1724.1	1782.8	2664.3	True	False	1750.1290158985496	1722.7969947969732	2273.7100960973194	1900.6603235319128	1800.357538688008	1483.5501288524429	1497.0440271761374	1663.4624257708178	1699.9180171290973	2181.7694524051435	0.8021603813222514	0.7896329251918862	1.04214040286925	0.8711554382781641	0.8251823017795606	0.6799756625142055	0.6861605040467603	0.7624373069927469	0.7791464928868347	1.0	11.091282944781621	-7.976104399557156	4.264033033892132	0.7596555213625915	0.8803182539123033	0.13487860854211642	0.10522621442900908	0.32655100866003134	13.880562677519695	0.03403880438941603	0.03756499120441367	1.0565634925857479e-08	7.976104399557156	0.12066273254971183	
EAQSSQATPVQTSQPDSS(ph)NIVKVSPR	ddPTM_K562_Methotrexat_30min_R1	1	EAQSSQATPVQTSQPDSSNIVKVSPR	26	1	H7C5E4;Q8IZH2-2;Q8IZH2	H7C5E4	XRN1	5-3 exoribonuclease 1	1	EAQSSQAT(0.001)PVQT(0.004)S(0.009)QPDS(0.357)S(0.557)NIVKVS(0.073)PR	89.39200000000001	5.654e-05	25875000.0	1833.1	1564.2	2900.4	1991.5	1783.7	1373.7	1523.1	1684.1	2118.0	2625.8	True	False	1752.5191188919648	1822.6574631460437	2291.6456763111746	1816.9082870032182	2018.2878145671564	1639.148083330331	1864.693946509629	1624.8692484430333	2019.5346422927012	2150.242175477771	0.8150333664172341	0.8476521779417986	1.0657616627773494	0.844978443695307	0.9386327910337378	0.7623085911084048	0.8672018286011459	0.7556680205484282	0.9392126455914076	1.0	11.070283440144237	-8.187456541662408	24.999999999910727	0.8497466373339913	0.905253729510492	0.025485129704996723	0.09452455704551413	391.274202753166	132216.5884487005	0.030303407652927748	0.030303403893076165	6.494466161877708e-09	8.187456541662408	0.05550709217650074	
EAQSSQATPVQTSQPDSSNIVKVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	EAQSSQATPVQTSQPDSSNIVKVSPR	26	1	H7C5E4;Q8IZH2-2;Q8IZH2	H7C5E4	XRN1	5-3 exoribonuclease 1	1	EAQSSQATPVQTSQPDS(0.111)S(0.111)NIVKVS(0.777)PR;EAQSSQATPVQTS(0.001)QPDS(0.024)S(0.034)NIVKVS(0.941)PR	120.69	1.0492000000000001e-13	21038000.0	3388.5	2584.5	4936.5	3487.3	2595.3	2595.6000000000004	2462.6000000000004	3115.5	3167.6	4377.4	True	False	3239.545597275337	3011.544696011346	3900.396111264004	3181.57382338254	2936.627440234421	3097.162965052201	3014.9007370984255	3005.926099117788	3020.3389673873257	3584.610442126741	0.903737142313663	0.8401316529738734	1.088094836031864	0.8875647367402411	0.8192319605284994	0.8640166107463162	0.8410678889027874	0.8385642310784486	0.8425849938648747	1.0	11.807600627090187	-7.512256260992776	24.86266822743265	0.8575837406029497	0.9426401731235089	0.16583095576176088	0.07472122239956705	736.6789071550488	1724251.155120537	0.020952448067308834	0.028939039529362515	3.0742822600231246e-08	7.512256260992776	0.08505643252055917	
EAQTLDSQIQET(ph)SI	ddPTM_K562_Methotrexat_30min_R1	1	EAQTLDSQIQETSI	14	0	E7EVA0;P27816;P27816-2;P27816-4	E7EVA0	MAP4	Microtubule-associated protein;Microtubule-associated protein 4	1	EAQTLDSQIQET(0.688)S(0.312)I	176.48	0.00040719	23031000.0	3365.1	2724.5	3268.9	3251.9	2566.3	2589.5	2780.7	2825.0	3385.5	3057.0	True	False	3217.1742332569684	3174.677316418231	2582.802562161633	2966.8109759004624	2903.81343192448	3089.8842263841407	3404.3427595425937	2725.6431487747586	3228.108843948035	2503.34767706434	1.2851487880539743	1.2681727534311793	1.0317394526638302	1.1851374074334025	1.159972087988099	1.2343008742627506	1.3599160798690355	1.0887992801587605	1.2895167832754328	1.0	11.289642958086725	-12.393342729803756	5.219395636266608	0.9998589179478076	1.2069455428593117	0.31233475077385175	0.09389815846515787	0.0001544483489670153	1.7951613885304245e-05	0.09109090130829986	0.022077801640441243	4.042567406990569e-13	12.393342729803756	0.2070866249115041	
EAQTLDSQIQETS(ph)I	ddPTM_K562_Methotrexat_30min_R1	1	EAQTLDSQIQETSI	14	0	E7EVA0;P27816;P27816-2;P27816-4	E7EVA0	MAP4	Microtubule-associated protein;Microtubule-associated protein 4	1	EAQTLDSQIQET(0.185)S(0.815)I	192.39	4.4001e-08	17468000.0	3597.8	3165.8	4616.6	4102.3	3116.4	3190.8	3311.6	3983.1	3646.4	4749.2	True	False	3439.645019884083	3688.894640600782	3647.6387495718436	3742.657728231637	3526.261224038281	3807.376941319374	4054.310598950355	3843.0121153574296	3476.8796598942895	3889.073859311078	0.8844380807140011	0.9485277919751938	0.9379196388463542	0.9623519284086371	0.9067097595988916	0.9789932202505981	1.0424874264713881	0.988156114895229	0.8940122470469599	1.0	11.925210918624225	-8.346899567269368	7.307704005405995	0.9842091309223499	0.9316694169151711	0.30033990875230787	0.039912289777721606	0.377950199884673	28.30017674224471	0.01442324565012076	0.012702024467023227	4.498838807202103e-09	8.346899567269368	-0.05253971400717872	
EARGS(ph)PNTASAEATLPR	ddPTM_K562_Methotrexat_30min_R1	3	EARGSPNTASAEATLPR	17	1	Q6PJG6;Q6PJG6-3	Q6PJG6	BRAT1	BRCA1-associated ATM activator 1	1	EARGS(0.995)PNT(0.003)AS(0.001)AEATLPR;EARGS(0.999)PNT(0.001)ASAEATLPR;EARGS(0.989)PNT(0.001)AS(0.011)AEATLPR	140.75	1.8469e-06	48024000.0	3591.5599999999995	3265.3999999999996	4450.38	4294.57	3000.98	3622.62	3377.21	3708.06	3566.58	3927.4100000000003	True	False	3433.6793228125157	3804.9518476902485	3516.30605604114	3918.0717158500697	3395.6614709647038	4322.640044867236	4134.635311595946	3577.6454280515845	3400.7704742720966	3216.117991618992	1.0676471857563918	1.1830883871816027	1.0933386353375154	1.2182611850872158	1.0558261481119757	1.344055179608389	1.285598141103826	1.1124111234024097	1.0574147102607234	1.0	11.651104621154351	-9.718622855434337	2.8036076785848127	1.0137768740012119	1.1789131491036686	0.3157531573662975	0.08772393704174479	0.32607990547814664	4.7824727409520005	0.08183715130107129	0.023856295369554314	1.911512509722314e-10	9.718622855434337	0.16513627510245676	
EAS(ph)PAPLAQGEPGREDLPTR	ddPTM_K562_Methotrexat_30min_R1	2	EASPAPLAQGEPGREDLPTR	20	1	A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6	A0A0J9YX88	PHRF1	PHD and RING finger domain-containing protein 1	1	EAS(1)PAPLAQGEPGREDLPTR;EAS(0.91)PAPLAQGEPGREDLPT(0.09)R	74.812	0.019019	70304000.0	3558.3999999999996	2291.83	4238.5	3140.3	2258.48	2136.66	2001.8	3183.4	3286.2	3827.8999999999996	True	False	3401.9769967078537	2670.515953050757	3348.896772529622	2864.994774630282	2555.509706477341	2549.5393053276434	2450.754607132149	3071.4380176317036	3133.425279273971	3134.630216890608	1.0852881396908245	0.8519397084418371	1.0683546513666786	0.9139817383219796	0.8152507727090933	0.8133461138700613	0.7818321261393223	0.9798406207793185	0.9996156045423972	1.0	11.61407954723528	-3.0000027874715087	0.8807374612518704	0.8984786069825965	72.6326956209156	0.19579477002141132	0.09429243073456454	1425.765352836825	3.4155228026693134	0.03364028074052767	205346.38321483147	0.0009999935816302546	3.0000027874715087	71.734217013933	
EASRPPEEPSAPS(ph)PTLPAQFK	ddPTM_K562_Methotrexat_30min_R1	1	EASRPPEEPSAPSPTLPAQFK	21	1	H0Y3X6;A0A0C4DFX9;Q9H3P2;Q9H3P2-7	H0Y3X6	NELFA	Negative elongation factor A	1	EASRPPEEPSAPS(0.742)PT(0.258)LPAQFK	128.33	9.3016e-09	151480000.0	2887.5	2868.9	5549.9	3922.5	2590.0	2268.2	2505.8	3060.5	3302.9	3873.5	True	False	2760.568957394875	3342.9369620379016	4385.051833870977	3578.620515074128	2930.630397336399	2706.497548671369	3067.7894367827657	2952.860480292088	3149.3488999190554	3171.971615017573	0.8703006497047676	1.05389876322061	1.3824372869889894	1.1282006743475546	0.9239144459746884	0.8532540253063943	0.9671553876013388	0.9309227315628829	0.992867932679028	1.0	11.631164145534807	-7.759570214441507	24.968462520052885	0.9377837714311128	1.1243463304783343	0.295011011736536	0.12299609674694006	60.14294700477569	803384.17497562	0.03934908230673102	0.048239051756187826	1.7395214386500985e-08	7.759570214441507	0.18656255904722152	
EASRPPEEPSAPSPT(ph)LPAQFK	ddPTM_K562_Methotrexat_30min_R1	1	EASRPPEEPSAPSPTLPAQFK	21	1	H0Y3X6;A0A0C4DFX9;Q9H3P2;Q9H3P2-7	H0Y3X6	NELFA	Negative elongation factor A	1	EASRPPEEPSAPS(0.02)PT(0.98)LPAQFK	107.63	0.00033938	159650000.0	2218.6	1804.1	3404.6	2811.0	1578.7	1785.0	1524.8	2143.5	2174.1	3260.7	True	False	2121.0730004766306	2102.196860543266	2690.0209866118544	2564.5639943590495	1786.3267213416889	2129.9259872931807	1866.7752147842439	2068.111890052634	2073.0265655375642	2670.1556331709808	0.7943630603875028	0.7872937571233527	1.0074397736199676	0.9604548748019851	0.6689972296559776	0.7976785925259934	0.6991259953515626	0.774528594648477	0.7763691897897773	1.0	11.382708118207992	-7.752250873558161	24.999828415550763	0.7710715936687963	0.8888134108954311	0.17823804757535255	0.10352940475650742	301.42509745105417	820104.8793928116	0.030550741740930757	0.038874132096730456	1.7690867364964057e-08	7.752250873558161	0.11774181722663479	
EASTTAAAPGEETS(ph)PVQVPAR	ddPTM_K562_Methotrexat_30min_R1	2	EASTTAAAPGEETSPVQVPAR	21	0	Q5SXM2	Q5SXM2	SNAPC4	snRNA-activating protein complex subunit 4	1	EASTTAAAPGEET(0.004)S(0.996)PVQVPAR;EASTTAAAPGEET(0.215)S(0.784)PVQVPAR	128.21	1.3276e-08	32081000.0	5157.7	4756.0	6167.5	4693.4	4326.7	4417.5	4267.3	5086.1	5457.8	5754.0	True	False	4930.973683655605	5541.848161822391	4873.026033874355	4281.936908973589	4895.736888090883	5271.119355107914	5224.350651920782	4907.218980171076	5204.068069265868	4711.894842600004	1.0464948493915696	1.1761400343061184	1.0341966866105694	0.9087505243667182	1.0390165849689115	1.118683572360739	1.1087579045032352	1.0414534161087712	1.1044533554136544	1.0	12.202091626939042	-8.18753470831152	24.97202959207115	1.0793913441207328	1.0407156581660868	0.05544443985289249	0.06827151251017434	446.8788788776848	150996.25281540415	0.024320786775326852	0.024320785949454242	6.4932973582278864e-09	8.18753470831152	-0.03867568595464599	
EATAQKPTGSVGSTVT(ph)TPPPLVR	ddPTM_K562_Methotrexat_30min_R1	4	EATAQKPTGSVGSTVTTPPPLVR	23	1	Q86YP4-2;Q86YP4;Q86YP4-3	Q86YP4-2	GATAD2A	Transcriptional repressor p66-alpha	1	EATAQKPTGSVGS(0.004)T(0.024)VT(0.486)T(0.486)PPPLVR;EATAQKPTGSVGST(0.001)VT(0.499)T(0.499)PPPLVR;EATAQKPTGS(0.001)VGS(0.023)T(0.098)VT(0.439)T(0.439)PPPLVR;EATAQKPTGSVGS(0.001)T(0.003)VT(0.498)T(0.498)PPPLVR	116.98	1.0832e-05	447870000.0	11191.2	9046.9	16328.100000000002	13242.8	8392.4	9201.6	9365.5	10179.3	10755.4	14054.7	True	False	10699.248247964515	10541.74645399305	12901.054946688912	12081.824284773393	9496.147701392274	10979.678971807798	11465.951779946117	9821.288249317837	10255.38380156512	11509.257637172444	0.9296210568271778	0.9159362650763382	1.120928504113181	1.0497483561191367	0.8250877685387583	0.9539867225098672	0.9962373023011963	0.853338117794598	0.8910551944238715	1.0	13.490507160221183	-7.739370764361933	24.998900882633393	0.9181338252331732	1.0061119449876958	0.22990483252085592	0.07533026027475126	374.9228172309727	424703.5624581937	0.02335948086100419	0.030132225899254864	1.8223392769449573e-08	7.739370764361933	0.08797811975452263	
EATDAIGHLDR	ddPTM_K562_Methotrexat_30min_R1	1	EATDAIGHLDR	11	0	Q12906;Q12906-7;Q12906-5;Q12906-4;Q12906-2;Q12906-6;Q12906-3	Q12906	ILF3	Interleukin enhancer-binding factor 3	0		90.926	0.023159	6078700.0	4115.1	2988.9	3921.7	3800.8	3068.5	3004.8	3077.5	4643.1	4462.5	4971.0	False	True	3934.205131281613	3482.7649223866565	3098.5887632014674	3467.589765122687	3472.061534450476	3585.435073735882	3767.707714781289	4479.799541265869	4255.039349023218	4070.703730025134	0.9664680586462925	0.8555682637127592	0.7611924052213781	0.8518403684223113	0.8529388933026177	0.8807899841224122	0.9255666746245926	1.1004975646405515	1.0452834770652655	1.0	11.991062509142363	-9.037535504750315	2.9347796106490476	1.0542612720063946	0.8559570102652259	0.7132796984153421	0.052670609311753484	0.14142288100962583	2.4255026551033723	0.02840253646225918	0.015841843699933925	9.172009486625659e-10	9.037535504750315	-0.19830426174116877	
EATGLS(ph)PQAAQEK	ddPTM_K562_Methotrexat_30min_R1	1	EATGLSPQAAQEK	13	0	P17029;C9JRM9	P17029	ZKSCAN1	Zinc finger protein with KRAB and SCAN domains 1	1	EAT(0.004)GLS(0.996)PQAAQEK	125.73	0.00075771	8503900.0	1039.5	883.05	1299.7	1340.1	859.25	752.68	963.58	1077.6	1045.0	1136.7	True	False	993.8048246621556	1028.9590032164128	1026.9107314513972	1222.6155136394739	972.2564358730893	898.1247574878606	1179.6873435609923	1039.7001972105054	996.4181780905914	930.832615151794	1.067651485869017	1.105417866184907	1.1032173934772744	1.3134644121167776	1.0445019008219218	0.9648617193558483	1.2673463782407504	1.1169572061470558	1.070459029766702	1.0	9.862377951542257	-11.01667971335911	20.249144602789702	1.0000000005409135	1.1199235015378028	0.1148004543421145	0.09726333676809525	0.0	0.0	0.09504322751631815	0.02305136859114063	9.62321716742129e-12	11.01667971335911	0.11992350099688931	
EATNTTSEPSAPSQDLLDLSPS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	EATNTTSEPSAPSQDLLDLSPSPR	24	0	I3NI44;J3KQU4;I3L4I4;O75674-2;O75674-3;O75674	I3NI44	TOM1L1	TOM1-like protein 1	1	EATNTTSEPSAPSQDLLDLS(0.04)PS(0.96)PR;EATNTTSEPSAPSQDLLDLS(0.083)PS(0.917)PR	211.04	2.6054e-41	61267000.0	2998.78	2698.1000000000004	3677.7	3201.77	3021.57	2489.06	2554.46	2950.63	3083.8900000000003	3607.2	True	False	2866.957221837786	3143.9151651415027	2905.8010287441766	2921.075795168614	3418.959416864765	2970.0356178890534	3127.362680454985	2846.8546704669952	2940.5206270160693	2953.901125517333	0.9705664137067824	1.0643264725358372	0.9837164161123597	0.9888874647613771	1.1574386790844204	1.005462096287632	1.0587228710667398	0.9637609891117834	0.9954702280365189	1.0	11.528405820949914	-9.264017399846496	24.929014582254837	0.9847117062841332	1.0341227834597992	0.14259053391256127	0.05192353218083671	429.60478389282156	4154135.348957775	0.0267801307586326	0.013772431905936949	5.444808379836509e-10	9.264017399846496	0.04941107717566606	
EAVIT(ph)PVASATQSVSR	ddPTM_K562_Methotrexat_30min_R1	2	EAVITPVASATQSVSR	16	0	P28749;P28749-2;H0YE05	P28749	RBL1	Retinoblastoma-like protein 1	1	EAVIT(0.969)PVAS(0.017)AT(0.013)QSVS(0.001)R;EAVIT(0.981)PVAS(0.016)AT(0.003)QSVSR	151.73	1.8537999999999998e-10	129805000.0	6018.8	5459.9	6441.5	6730.7	5542.9	5324.7	6052.5	6195.700000000001	7070.9	7006.4	True	False	5754.220758707627	6362.055672568138	5089.5171783059	6140.629981085896	6271.888505558271	6353.622915708682	7409.927195357842	5977.793719243808	6742.175402354794	5737.473066595872	1.0029190014344924	1.1088602244790737	0.8870659817015204	1.0702673302010328	1.0931447403341756	1.1073904560354442	1.2914966413522986	1.041886149156343	1.1751123402405836	1.0	12.486199760765043	-7.7394570095584285	2.4344233588770745	1.1327373445191506	1.008323601385159	0.24819109361797387	0.08952158412522428	0.3802976043774276	4.617520780412903	0.02859397618150639	0.03682573869984453	1.8219774201614866e-08	7.7394570095584285	-0.12441374313399156	
EAVREGS(ph)PANWK	ddPTM_K562_Methotrexat_30min_R1	4	EAVREGSPANWK	12	1	O96019-2;O96019	O96019-2	ACTL6A	Actin-like protein 6A	1	EAVREGS(1)PANWK;EAVREGS(1)PANWK;EAVREGS(1)PANWK;EAVREGS(1)PANWK	104.09	0.0032679000000000002	325619000.0	15015.900000000001	11436.0	21046.7	18345.1	11466.0	11684.1	10796.9	14253.6	14473.1	20401.1	True	False	14355.81901553098	13325.604621236518	16629.28529017323	16736.813565605204	12973.979975235185	13941.886962539074	13218.379667172096	13752.292808982615	13800.248740021958	16706.263099299093	0.8593076099785161	0.7976412523872912	0.9953922784126935	1.0018286834179806	0.7765937779214973	0.8345305517859349	0.7912230035289382	0.8231818646241474	0.8260524007071901	1.0	14.028101443228364	-7.778663880539317	24.999894030444114	0.8301840229461602	0.9111102551078726	0.15141787209898538	0.08012764000098174	419.11699543252047	608309.8301203789	0.025232590255938353	0.028680002416979187	1.6647005363555893e-08	7.778663880539317	0.08092623216171235	
ECPSDECGAGVFMASHFDR	ddPTM_K562_Methotrexat_30min_R1	8	ECPSDECGAGVFMASHFDR	19	0	A0A2R8Y422;P62979	A0A2R8Y422	RPS27A	Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a	0	;;;;;;;	184.32	5.6292e-15	266147000.0	17891.399999999998	14781.300000000001	20130.0	18186.7	15571.699999999999	14801.6	14629.699999999999	18157.3	18670.8	21526.7	False	True	17104.915478557457	17223.65858585898	15904.988092726511	16592.300247673327	17619.651489653737	17661.799716256985	17910.782633610346	17518.69746734439	17802.798583247673	17628.00603201209	0.9703261643713582	0.9770622130819093	0.9022567875143329	0.9412465719345714	0.9995260642444085	1.0019170451940806	1.0160413265734503	0.9937991532071638	1.0099156167134367	1.0	14.1055816749439	-7.783702710986409	7.458669143560222	1.003929705909878	0.9465267084391064	0.6624258713684402	0.019513151529725378	0.10956168627195133	25.291797593384214	0.006419115206893873	0.00748086080880291	1.645497735689005e-08	7.783702710986409	-0.0574029974707716	
ECQQPHY(ph)Y(ph)GSEVT(ph)T(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	ECQQPHYYGSEVTTK	15	0	E7ET40;P00749-2;P00749	E7ET40	PLAU	Urokinase-type plasminogen activator;Urokinase-type plasminogen activator long chain A;Urokinase-type plasminogen activator short chain A;Urokinase-type plasminogen activator chain B	4	ECQQPHY(0.749)Y(0.841)GS(0.414)EVT(0.998)T(0.998)K	43.316	0.032952999999999996	2352900.0	891.0	339.18	1320.3	853.33	624.67	597.21	580.42	971.31	547.58	974.82	True	False	851.8327068532765	395.2237299257605	1043.187072967054	778.5198837802943	706.8250541714782	712.6123803200895	710.5939599718462	937.1484767562508	522.1231253194699	798.2706518010666	1.067097612734932	0.4950999125848515	1.306808750407402	0.9752580556779704	0.885445371913313	0.892695201448639	0.8901667102111253	1.1739733568331074	0.6540677953541825	1.0	9.640734161548274	-7.5110072990968355	0.004881415723296876	1.860664463576323	0.00017868003606052752	0.0	0.22310381365354423	286291.92737145745	353.2588443545205	65872.83233508377	68772.47903861957	3.083136132187565e-08	7.5110072990968355	-1.8604857835402624	
ECS(ph)VEKGTGDSLR	ddPTM_K562_Methotrexat_30min_R1	2	ECSVEKGTGDSLR	13	1	Q5T757;Q05519-2;Q05519	Q5T757	SRSF11	Serine/arginine-rich splicing factor 11	1	ECS(0.985)VEKGT(0.014)GDS(0.001)LR;ECS(0.997)VEKGT(0.001)GDS(0.002)LR	150.9	6.430899999999999e-09	30834000.0	4013.2	2669.2	5770.9	3820.8999999999996	2342.5	2320.7	2280.19	3805.7	3221.3999999999996	4094.2	True	False	3836.7845332699962	3110.2399313575115	4559.666954014671	3485.9276293299527	2650.579809173945	2769.1424306505796	2791.5806512322165	3671.8513739087057	3071.637817130173	3352.700706390846	1.1443862334494697	0.9276819506819798	1.3599982084064743	1.039737195355718	0.7905805024950383	0.8259438205659395	0.8326364014273524	1.0951921139007432	0.9161682136658018	1.0	11.71110798500884	-7.529010600801408	22.986199169720777	0.9075295840570695	1.1353013647889265	0.40569874116929994	0.12785224660860794	59.00463340193969	221184.16084077745	0.03835145799261965	0.04969866343712104	2.957940264574946e-08	7.529010600801408	0.227771780731857	
ECWVAGWGQT(ph)NAADKNS(ph)VKT(ph)DLMK	ddPTM_K562_Methotrexat_30min_R1	1	ECWVAGWGQTNAADKNSVKTDLMK	24	2	Q6UWB4-2;Q6UWB4	Q6UWB4-2	PRSS55	Serine protease 55	3	ECWVAGWGQT(1)NAADKNS(1)VKT(1)DLMK	41.912	0.03119	0.0	261.29	340.58	359.73	382.21	250.29	269.25	382.75	172.23	220.46	168.09	True	False	249.80400445981192	396.85505612982956	284.22758900131663	348.70224271930704	283.2075220653771	321.27875186481157	468.59143065232786	166.17257327910664	210.21086271947541	137.6472721745976	1.8148126040808858	2.883130554352301	2.0648980870524656	2.533302964965397	2.0574873558420013	2.3340727846556093	3.404291441808936	1.2072347722832195	1.5271705671931886	1.0	7.104832209376377	-9.2984233539073	24.955059886655036	1.2754013728881035	2.428803129066167	0.6040937687860413	0.4437400548008352	396.1450801918295	267298.03357659135	0.23240998219436257	0.11165094070378619	5.0301003131543e-10	9.2984233539073	1.1534017561780634	
EDAEGVAAEEEQEGDS(ph)GEQETGATDARPR	ddPTM_K562_Methotrexat_30min_R1	2	EDAEGVAAEEEQEGDSGEQETGATDARPR	29	1	Q96KC8	Q96KC8	DNAJC1	DnaJ homolog subfamily C member 1	1	EDAEGVAAEEEQEGDS(0.983)GEQET(0.016)GAT(0.001)DARPR;EDAEGVAAEEEQEGDS(0.998)GEQET(0.001)GAT(0.001)DARPR	87.098	4.0062e-05	12283000.0	1601.5	1290.17	1821.79	1307.0	1085.73	1097.06	1000.84	1320.1799999999998	1420.8600000000001	1903.5	True	False	1531.0999775819546	1503.348663359628	1439.4211752333931	1192.417339248409	1228.5225255984735	1309.051318554541	1225.3038470387348	1273.748521114853	1354.8045287289924	1558.757704707874	0.9822565578714476	0.9644530762023531	0.9234412576668896	0.7649792752568171	0.7881420710146292	0.8398042329483592	0.7860771711587905	0.8171561989831932	0.8691565883761875	1.0	10.606180975762017	-7.060333513253878	4.654534353010823	0.8263622437463493	0.968302395186796	0.43353936849227126	0.06280391743985561	0.16677674809690277	7.327279851554474	0.01625770286561236	0.030236179683207763	8.702949966251591e-08	7.060333513253878	0.1419401514404467	
EDGNEEDKENQGDETQGQQPPQRR	ddPTM_K562_Methotrexat_30min_R1	1	EDGNEEDKENQGDETQGQQPPQRR	24	2	P67809;H0Y449	P67809	YBX1	Nuclease-sensitive element-binding protein 1	0		71.872	0.004014	3773000.0	1047.0	500.88	1427.8	1003.1	706.84	471.77	468.45	751.57	619.41	971.9	False	True	1000.9751336424023	583.6419064957104	1128.1242920414757	915.1597804132201	799.8018494414132	562.932875644428	573.5118372020455	725.136857106069	590.6137642976968	795.8794920964451	1.2576968543387264	0.7333294955977887	1.4174561642113137	1.1498722978808964	1.0049283307132792	0.7073091859190807	0.7206013509549597	0.9111138863447389	0.7420894371105693	1.0	9.636406191754231	-8.044016256646135	4.142840132040398	0.806008295515129	1.1272667140261687	0.41489934438097587	0.18097744869065685	0.22138314031263584	8.128559886835342	0.05943425566556594	0.061949204214907176	9.036156486671984e-09	8.044016256646135	0.32125841851103976	
EDHLVYADEES(ph)SNITDGRITPEPAVSNTEEPSTTSTASNYPDVLTRPSLHR	ddPTM_K562_Methotrexat_30min_R1	1	EDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTASNYPDVLTRPSLHR	51	2	P49790-2;P49790;P49790-3	P49790-2	NUP153	Nuclear pore complex protein Nup153	1	EDHLVY(0.001)ADEES(0.222)S(0.222)NIT(0.205)DGRIT(0.205)PEPAVS(0.066)NT(0.066)EEPS(0.008)T(0.003)T(0.001)STASNYPDVLTRPSLHR	50.873000000000005	9.6922e-07	22009000.0	619.62	547.24	534.23	650.64	430.6	284.91	655.92	842.91	807.83	798.29	True	False	592.3822467120391	637.6621085104466	422.1024236849119	593.5994013837679	487.2314475262754	339.96482523232504	803.0267568738726	813.2643775340641	770.2741596238496	653.7119454117405	0.9061823802820783	0.9754481511100659	0.6457009492446258	0.9080442931326416	0.7453304944877405	0.5200529493433047	1.2284107128684731	1.244071464874073	1.1783082212742684	1.0	9.352511249851371	-8.783977668738856	24.999912753744816	1.1830370844376519	0.7898545860877388	0.6355907433274599	0.1402892105263093	153.2401550775325	169975.27707790732	0.05971652985143481	0.040293542030845605	1.644456278372784e-09	8.783977668738856	-0.39318249834991303	
EDKSPSEESAPTT(ph)SPESVSGSVPSSGSSGR	ddPTM_K562_Methotrexat_30min_R1	2	EDKSPSEESAPTTSPESVSGSVPSSGSSGR	30	1	A0A494C0B4;P54725-2;P54725-3;P54725	A0A494C0B4	RAD23A	UV excision repair protein RAD23 homolog A	1	EDKSPSEESAPT(0.009)T(0.815)S(0.176)PESVSGSVPSSGSSGR;EDKSPSEESAPT(0.128)T(0.531)S(0.34)PESVSGSVPSSGSSGR	133.91	8.2254e-18	27080000.0	2706.1499999999996	1859.26	4310.1	2731.64	2191.58	2064.66	1749.67	3070.6	3113.7	3589.8	True	False	2587.190886252518	2166.4711129835764	3405.4689110015142	2492.1613623447015	2479.811183858883	2463.626324327585	2142.0780364976044	2962.6052575673502	2968.9447666226533	2939.6524341267796	0.8801009453422136	0.7369820621760423	1.1584597115859736	0.8477741563638271	0.8435729187132656	0.8380672135681926	0.728684116404362	1.007808005862907	1.0099645564066744	1.0	11.521429874688504	-9.336983277416786	24.73760067954445	1.0066655785056875	0.8663759665537196	0.2608955570694452	0.11087251042139629	176.95401217769395	57943.40136931754	0.061636987635811324	0.02960943059877014	4.6027429618054825e-10	9.336983277416786	-0.14028961195196787	
EDLYLKPIQR	ddPTM_K562_Methotrexat_30min_R1	1	EDLYLKPIQR	10	1	P13639	P13639	EEF2	Elongation factor 2	0		76.679	0.017766999999999998	0.0	1809.7	1524.6	2213.8	1463.0	1486.0	1181.3	1553.8	1814.9	1626.2	2190.3	False	True	1730.1477548735963	1776.5142362309534	1749.153633367011	1334.7410614540345	1681.4350465026585	1409.5695063246135	1902.279202998266	1751.0689383048864	1550.5983169482483	1793.615445559053	0.9646146609393886	0.9904655095547702	0.9752110675105257	0.7441623368926824	0.9374557130770979	0.7858816725818639	1.060583642780431	0.9762789134318002	0.8645099041645137	1.0	10.808654891610919	-12.156373488694411	10.934055913761332	0.9999996973428483	0.9225743857872059	0.06018913238944934	0.09229660662872674	1.1128163065237752e-10	0.0	0.09078360057936792	0.022018257309565806	6.976321896670356e-13	12.156373488694411	-0.07742531155564247	
EDPQARPLEGSSSEDSPPEGQAPPS(ph)HSPR	ddPTM_K562_Methotrexat_30min_R1	2	EDPQARPLEGSSSEDSPPEGQAPPSHSPR	29	1	Q12789-3;Q12789	Q12789-3	GTF3C1	General transcription factor 3C polypeptide 1	1	EDPQARPLEGSSSEDSPPEGQAPPS(0.5)HS(0.5)PR;EDPQARPLEGSSSEDS(0.001)PPEGQAPPS(0.866)HS(0.133)PR	110.44	4.7622e-12	38419000.0	2400.95	2169.63	2705.16	2234.1000000000004	2064.02	2077.43	1807.8600000000001	2235.07	2336.67	2755.2599999999998	True	False	2295.4071128163573	2528.1244800956088	2137.3838841987103	2038.239921664017	2335.474807996245	2478.8639460966224	2213.3186252622268	2156.4613212502636	2228.0387217214748	2256.2557149847225	1.0173523761387568	1.120495546362628	0.9473145574783322	0.9033727463280101	1.0351108664170448	1.098662678008289	0.9809697591291037	0.9557699098237477	0.9874938850787847	1.0	11.139714870942084	-6.765648592631179	24.999865148090496	0.9892846143824363	1.0689239605127963	0.2570479842408503	0.05462198495796449	143.00499164082152	849373.501719403	0.015366299512391992	0.033940453900415314	1.7153447093556784e-07	6.765648592631179	0.07963934613035994	
EDPQARPLEGSSSEDSPPEGQAPPSHS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	EDPQARPLEGSSSEDSPPEGQAPPSHSPR	29	1	Q12789-3;Q12789	Q12789-3	GTF3C1	General transcription factor 3C polypeptide 1	1	EDPQARPLEGSSSEDSPPEGQAPPS(0.22)HS(0.78)PR	93.17200000000001	8.764700000000001e-06	23821000.0	1114.2	837.03	1382.4	1280.2	1230.0	987.24	843.02	1518.5	1099.8	1032.0	True	False	1065.2211021054095	975.3349804226644	1092.2531316137668	1167.9668536387258	1391.7665593528063	1178.010157812504	1032.0886946271073	1465.093494306006	1048.670538051705	845.0947997155376	1.2604752774055257	1.1541131015727066	1.2924622562834651	1.3820542429463158	1.6468762555647964	1.3939384767354233	1.2212697261591392	1.7336439589962718	1.2408910082096019	1.0	9.72296937662301	-7.112656839227138	3.129638397315823	1.4105715912976506	1.2093619981123251	0.08096013703030103	0.20015512603108737	0.47971608680085714	8.889455399516526	0.053668661793489246	0.10550991893576737	7.715128444637756e-08	7.112656839227138	-0.2012095931853255	
EDQTEYLEER	ddPTM_K562_Methotrexat_30min_R1	2	EDQTEYLEER	10	0	P08238;Q58FF7;Q58FF6;P07900;P07900-2;G3V2J8	P08238;P07900	HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1	Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha	0	;	141.1	0.00051309	78631000.0	2545.5	2582.26	3416.3	2228.95	2532.8	1951.97	2121.05	2836.3	3268.1	3337.1	False	True	2433.6028678956377	3008.9345740848385	2699.265316501815	2033.541414168127	2865.907594738853	2329.1605767040164	2596.749455219123	2736.5457213698573	3116.1667443233127	2732.718852839847	0.8905427154961927	1.1010772553341694	0.987758149250053	0.7441458575421568	1.0487385454089417	0.8523235291049235	0.9502439127686244	1.001400388673732	1.1403173586938833	1.0	11.416121325028904	-9.495759790333537	3.9655316247895778	1.0720664899853798	0.9416535261054809	0.21603652090265746	0.09943694324288702	0.3304225679616075	11.440869502534644	0.06634036679628952	0.02621749417224147	3.193303593165043e-10	9.495759790333537	-0.13041296387989887	
EDQTEYLEERR	ddPTM_K562_Methotrexat_30min_R1	4	EDQTEYLEERR	11	1	P08238;Q58FF7;P07900;P07900-2;G3V2J8	P08238;P07900	HSP90AB1;HSP90AB3P;HSP90AA1	Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha	0	;;;	171.32	5.3799e-09	94238000.0	9863.8	9438.400000000001	12097.1	10857.3	9985.5	9035.6	8579.0	11505.9	10798.900000000001	12167.900000000001	False	True	9430.199162580628	10997.935174630873	9558.08402665285	9905.457366045723	11298.768275136139	10781.601821168775	10503.059134072688	11101.2309753938	10296.861496059795	9964.175400638274	0.9464103935762269	1.1037476491959766	0.9592448589414222	0.99410708541032	1.1339391189774093	1.0820365346517424	1.0540821203729407	1.1141143676257135	1.0333882215080448	1.0	13.282534702407412	-7.732506165433454	24.986543437421236	1.0751457325026137	1.0052515672471638	0.2814715769618452	0.05316157996015443	266.58529830980996	230220.29178813848	0.014970367768931308	0.019323328713940508	1.8513726111274713e-08	7.732506165433454	-0.06989416525544989	
EDS(ph)RGSLIPEGATGFPDQGNTGENTR	ddPTM_K562_Methotrexat_30min_R1	2	EDSRGSLIPEGATGFPDQGNTGENTR	26	1	A0A0J9YW64;A6NIW2;Q5JSL3	A0A0J9YW64	DOCK11	Dedicator of cytokinesis protein 11	1	EDS(0.877)RGS(0.123)LIPEGATGFPDQGNTGENTR;EDS(0.5)RGS(0.5)LIPEGATGFPDQGNTGENTR	133.72	2.9539e-13	100491000.0	1530.53	1439.75	1998.4099999999999	1768.32	1471.55	1186.9099999999999	1396.63	1722.6399999999999	1683.62	2179.8	True	False	1463.2497338048765	1677.6442159343535	1578.971050888503	1613.2941310939154	1665.0846182240844	1416.2635594275341	1709.8598296328162	1662.0537747983535	1605.3488736812258	1785.017097306134	0.8197398982974146	0.9398477014400463	0.884569146856584	0.90379757904203	0.9328115796408638	0.7934173636571292	0.9578954914287702	0.9311136444052266	0.899346497074983	1.0	10.801722177449035	-15.999999815747175	0.16472753997400733	1.3985085171807976	0.8714234158681391	0.32293801371144715	0.04843417433775809	163.5352231646547	1.5215677637432627	21.162721771018944	0.18641720644423967	1.0000004242578971e-16	15.999999815747175	-0.5270851013126585	
EDSGLFS(ph)PIR	ddPTM_K562_Methotrexat_30min_R1	1	EDSGLFSPIR	10	0	Q9UKA4	Q9UKA4	AKAP11	A-kinase anchor protein 11	1	EDSGLFS(1)PIR	84.821	0.022225	18925000.0	1576.6	1388.5	1704.0	1445.1	1363.6	1327.0	1273.7	1260.7	1721.6	1791.2	True	False	1507.294551767536	1617.9260245354055	1346.3536865378017	1318.4103266624918	1542.937301084136	1583.4239692650135	1559.3596478690265	1216.3604664284371	1641.5631917710639	1466.7963229171228	1.0276099879837928	1.103033869977067	0.917887279578266	0.8988366728657151	1.0519097143736944	1.079511820779551	1.063105779245353	0.8292633731242072	1.119148695782363	1.0	10.51845283916499	-11.082037321348347	0.0021239794587058856	4.002199035167754e-05	1.9982228805973725	0.0	0.09167549811550026	1261936.0572442922	785.187379281563	372302.14726289816	366378.14076031744	8.278710170790537e-12	11.082037321348347	1.998182858607021	
EEAS(ph)DDDMEGDEAVVR	ddPTM_K562_Methotrexat_30min_R1	3	EEASDDDMEGDEAVVR	16	0	A0A494C1A5;O75643-2;O75643	A0A494C1A5	SNRNP200	U5 small nuclear ribonucleoprotein 200 kDa helicase	1	EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR	163.9	3.4295e-08	252799000.0	16919.0	13980.2	22361.0	15565.099999999999	15874.2	13967.400000000001	14392.8	21006.699999999997	18294.8	21658.6	True	False	16175.261018238592	16290.19042723074	17667.731681145422	14200.531849376757	17961.93554185231	16666.402372503515	17620.751778165446	20267.88245428908	17444.278741178696	17736.01766387494	0.9120007278288109	0.9184807286480613	0.9961498694902292	0.8006606735795416	1.0127378018143003	0.9396924771026791	0.9935010278015076	1.1427527215182633	0.9835510469021204	1.0	14.114394491694782	-8.909306463122515	3.4853520070595914	1.0507422083192566	0.9299774477209158	0.3613952786457604	0.06666957700472297	0.2356890379321841	5.623726270193382	0.029346677138655724	0.018681755183054028	1.2322349905983869e-09	8.909306463122515	-0.12076476059834074	
EEATYGVWAERDS(ph)DDERPSFGGK	ddPTM_K562_Methotrexat_30min_R1	1	EEATYGVWAERDSDDERPSFGGK	23	2	Q9UBB9;F6UKU9;F6SQZ1;F6XM96	Q9UBB9	TFIP11	Tuftelin-interacting protein 11	1	EEAT(0.004)Y(0.003)GVWAERDS(0.992)DDERPSFGGK	69.986	0.0021855	13461000.0	860.8	633.94	1143.2	697.98	796.9	673.02	457.16	883.62	851.68	1178.9	True	False	822.9602626928171	738.6878098624237	903.2579427523569	636.7891770838596	901.7063180067083	803.0715898980708	559.6897673076896	852.5425837594157	812.0855826949237	965.3897862254337	0.8524642319974193	0.7651705253176653	0.9356406662266386	0.6596187220642081	0.934033414142778	0.8318625298885656	0.5797552193876157	0.8831071096088162	0.8411996835703925	1.0	9.914967752998233	-10.184178096138446	1.8134450565271958	0.9986833520942451	0.8006127835793392	0.22944214901762727	0.10756806698465275	1.015192367285103	6.228833568349329	0.10020198854277576	0.028260253881096344	6.543677749107457e-11	10.184178096138446	-0.1980705685149059	
EEDEPEERS(ph)GDETPGSEVPGDK	ddPTM_K562_Methotrexat_30min_R1	1	EEDEPEERSGDETPGSEVPGDK	22	1	H3BQZ7;Q1KMD3	H3BQZ7	HNRNPUL2-BSCL2;HNRNPUL2	Heterogeneous nuclear ribonucleoprotein U-like protein 2	1	EEDEPEERS(0.943)GDET(0.035)PGS(0.022)EVPGDK	64.035	0.0080266	15815000.0	1368.2	944.85	2257.6	1330.4	1029.9	947.03	1042.0	1280.4	1501.6	1689.7	True	False	1308.0555662364231	1100.9704027960233	1783.7606119294255	1213.7658975792535	1165.3499020141915	1130.0301443956635	1275.6950247935345	1235.367606262372	1431.7909437519927	1383.6789564722324	0.9453461441455934	0.7956834189362897	1.289143412628912	0.877201963578183	0.8422111910882253	0.816685213798972	0.92195882493291	0.8928137560261894	1.0347710623585868	1.0	10.434293529924467	-5.891334445228931	19.828179264298086	0.9350720980870965	2.4135878231076564	0.0	0.13671009325241	14650.356021980928	3331824.536187738	0.03322480904726162	241937.92447602542	1.2842972563540212e-06	5.891334445228931	1.4785157250205598	
EEDGADAS(ph)EEDLTR	ddPTM_K562_Methotrexat_30min_R1	1	EEDGADASEEDLTR	14	0	E5RHA3;Q86X53	E5RHA3	ERICH1	Glutamate-rich protein 1	1	EEDGADAS(1)EEDLTR	210.37	7.546600000000001e-19	27633000.0	1988.2	1324.4	2446.8	1995.2	1513.1	1197.5	1604.9	1746.4	1607.2	2188.0	True	False	1900.80110860346	1543.2345890491104	1933.2501175004081	1820.2839137478388	1712.0991715095386	1428.8999270496272	1964.8396787822883	1684.9781221310564	1532.4816228011466	1791.7319978465093	1.060873563059677	0.8613088290569856	1.0789839774162597	1.0159353719951678	0.9555553919711867	0.7974964608362346	1.0966147175715106	0.9404186140316961	0.855307392312602	1.0	10.807139143992313	-7.906992629787762	6.227342455773815	0.9370715939104395	0.9987488644702107	0.10257409200110057	0.09225878610981877	0.5589511902688995	31.003877782298115	0.02862677811106198	0.03256719090157532	1.2388176097568094e-08	7.906992629787762	0.061677270559771236	
EEDGADASEEDLT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	EEDGADASEEDLTR	14	0	E5RHA3;Q86X53	E5RHA3	ERICH1	Glutamate-rich protein 1	1	EEDGADAS(0.365)EEDLT(0.635)R	168.93	0.00011973	16642000.0	1849.0	1460.1	1913.7	2080.3	1811.0	1333.4	1539.9	1638.3	1938.9	1856.2	True	False	1767.720173930087	1701.3567075434958	1512.04052225786	1897.9233288741136	2049.1782430796206	1591.0606786872418	1885.2617741646498	1580.6800604027203	1848.7609622008115	1520.0241930542445	1.1629552884800716	1.1192958081311144	0.9947476686010223	1.2486138954542174	1.3481221236104972	1.0467337861841928	1.2402840578323422	1.0399045407472085	1.2162707479583093	1.0	10.56987857077938	-12.276552773473234	3.7492796822359877	0.9997062909713246	1.1555436950707532	0.16961524259013283	0.10442865072611243	13074282.855092926	14270130.827382969	26872.069407941482	0.025302192513708622	5.289897129005768e-13	12.276552773473234	0.1558374040994286	
EEEEGISQES(ph)S(ph)EEEQ	ddPTM_K562_Methotrexat_30min_R1	3	EEEEGISQESSEEEQ	15	0	P17096;P17096-2	P17096	HMGA1	High mobility group protein HMG-I/HMG-Y	2	EEEEGISQES(1)S(1)EEEQ;EEEEGIS(0.006)QES(0.994)S(1)EEEQ;EEEEGISQES(1)S(1)EEEQ	154.65	1.7922e-08	37563000.0	15856.3	14432.3	19633.0	15485.400000000001	13432.4	13378.2	11854.2	16608.1	16857.7	17700.1	True	False	15159.276037797532	16816.992267844664	15512.30160081965	14127.81902463452	15198.99604215499	15963.347811319683	14512.80610643717	16023.983709439302	16073.989206505028	14494.440372524208	1.0458683224868477	1.16023743143082	1.070224251653407	0.9747060708473672	1.0486086838486255	1.1013428184216032	1.0012670881690455	1.1055262085050561	1.1089761862744991	1.0	13.823212011853892	-12.225344169563925	0.005338772063481186	4.60136640650839e-06	2.0781704011953956	0.06074578813756237	0.05392402062663085	73871.97441173372	69.40367874478626	13977.568631876029	13048.247798384378	5.951902803635098e-13	12.225344169563925	2.078165799828989	
EEEEGISQES(ph)SEEEQ	ddPTM_K562_Methotrexat_30min_R1	1	EEEEGISQESSEEEQ	15	0	P17096;P17096-2	P17096	HMGA1	High mobility group protein HMG-I/HMG-Y	1	EEEEGIS(0.001)QES(0.902)S(0.097)EEEQ	130.98	0.00022287	16951000.0	1810.4	1671.7	2566.6	2091.1	1911.6	1790.6	1475.6	2447.3	1923.8	2459.2	True	False	1730.816983711753	1947.9200109584717	2027.905734664275	1907.7765096421945	2163.0089063892883	2136.60810803763	1806.5408623659691	2361.227071857154	1834.3629579049566	2013.8150498647763	0.8594716698675849	0.967278505088772	1.006997010376124	0.9473444494171885	1.07408518301347	1.0609753404023368	0.8970738710524955	1.1725143637275457	0.9108894871096184	1.0	10.975715476003163	-5.161519256076588	0.8777095940475568	1.0180970094368662	2.9561899661463342e-12	0.25270764551866387	0.07735557590981203	17.04690922017269	2.345258830722485	0.024622285000979217	26.11411613143584	6.894150246894391e-06	5.161519256076588	-1.0180970094339101	
EEEEGISQESS(ph)EEEQ	ddPTM_K562_Methotrexat_30min_R1	1	EEEEGISQESSEEEQ	15	0	P17096;P17096-2	P17096	HMGA1	High mobility group protein HMG-I/HMG-Y	1	EEEEGISQES(0.063)S(0.937)EEEQ	246.64	9.116499999999997e-62	11443000.0	8022.1	6988.4	9713.2	7802.1	7430.8	7746.7	6774.4	9590.2	8934.0	10104.0	True	False	7669.458089391318	8143.1143175104235	7674.532058731796	7118.102006541708	8408.080446535645	9243.640137682954	8293.731646795895	9252.907230222898	8518.660290010857	8274.067690238177	0.926927162856042	0.9841730358476215	0.9275404004473254	0.8602905213042567	1.0161967198377622	1.1171820782405115	1.002376576708566	1.1183020947652587	1.029561348653366	1.0	13.014381044987308	-7.95746926884892	7.48541067404949	1.0587171276446974	0.9297380987578947	0.624128565306155	0.04717067114474655	0.13684473437457043	19.852131274391503	0.01422703528813018	0.01608912318446169	1.1028862725236642e-08	7.95746926884892	-0.12897902888680268	
EEELREYQER	ddPTM_K562_Methotrexat_30min_R1	1	EEELREYQER	10	1	Q14152-2;Q14152	Q14152-2	EIF3A	Eukaryotic translation initiation factor 3 subunit A	0		112.11	0.0076045	12903000.0	1696.0	1206.6	1666.8	1579.7	1295.2	1432.6	1531.4	1587.7	1356.5	1777.7	False	True	1621.4458707330593	1405.9701413067487	1316.9614581697233	1441.2101536424727	1465.5415021737847	1709.4296747317699	1874.855432791574	1531.859691083073	1293.4366110812318	1455.7413037347974	1.113828306288443	0.9658104346559669	0.9046672336568142	0.9900180409424092	1.0067321016542186	1.1742674816920553	1.2879042642958007	1.0522884025842978	0.8885071872061592	1.0	10.507538285130746	-8.086476442735677	7.499988634575232	1.096690972336557	0.9868072542562225	0.12004994162882365	0.109810506157175	0.5320109374101541	40.768270381973394	0.0387339040141195	0.038835455741538946	8.194520711903358e-09	8.086476442735677	-0.10988371808033448	
EEEMQPAEEGPS(ph)VPK	ddPTM_K562_Methotrexat_30min_R1	1	EEEMQPAEEGPSVPK	15	0	Q6ZU67-5;Q6ZU67-4;Q6ZU67-2;Q6ZU67	Q6ZU67-5	BEND4	BEN domain-containing protein 4	1	EEEMQPAEEGPS(1)VPK	96.464	0.004503899999999999	18727000.0	1741.1	1580.0	2062.4	1944.9	1589.0	1201.7	1520.2	1625.0	1622.0	1668.5	True	False	1664.563328734276	1841.0681445919631	1629.5304243635933	1774.3936366520509	1797.9813518793585	1433.9115176079636	1861.1435476882264	1567.8478289412324	1546.5935740315208	1366.3184819044325	1.2182835486599999	1.3474663257323465	1.1926431838148635	1.2986676680087252	1.3159313700955404	1.0494709224816436	1.3621593884129313	1.14749807581897	1.1319422188272044	1.0	10.416078092382074	-10.103530499277012	0.5600395890834033	0.9915687213109105	1.2684440481105421	0.4500426040411134	0.0881348215560949	0.931964804252395	0.6790751134286978	0.0952577650424035	0.041257940943834254	7.878970977166158e-11	10.103530499277012	0.27687532679963167	
EEENADS(ph)DDEGELQDLLSQDWR	ddPTM_K562_Methotrexat_30min_R1	2	EEENADSDDEGELQDLLSQDWR	22	0	J3QQQ3;Q96NB3	J3QQQ3	ZNF830	Zinc finger protein 830	1	EEENADS(1)DDEGELQDLLSQDWR;EEENADS(1)DDEGELQDLLSQDWR	95.713	7.269600000000001e-05	4823600.0	952.62	808.76	1335.17	961.93	957.1500000000001	783.0799999999999	900.18	1117.9299999999998	1133.8700000000001	1396.38	True	False	910.743965434981	942.3938434305032	1054.9360631776283	877.5990903926717	1083.032001857349	934.3991272434413	1102.0682796724034	1078.6117682512443	1081.156631188114	1143.4820508011458	0.7964654668579153	0.8241439756489783	0.9225646020753187	0.7674795505340978	0.9471351134008232	0.8171524219280776	0.9637827536516843	0.943269522679038	0.9454950608368838	1.0	10.159218004654425	-8.713523990179732	0.3714792258809808	1.0065650137126245	0.8037268005042987	0.5231512140851666	0.05398359268253958	1.099056791627809	0.3663157830482816	0.060820306087391404	0.07957787966701595	1.9340870178035144e-09	8.713523990179732	-0.20283821320832585	
EEESEDGREDETT(ph)DT(ph)QRGPRECER	ddPTM_K562_Methotrexat_30min_R1	1	EEESEDGREDETTDTQRGPRECER	24	3	A0A1B0GVG6	A0A1B0GVG6			2	EEES(0.007)EDGREDET(0.409)T(0.792)DT(0.792)QRGPRECER	41.256	0.032657	22001000.0	0.0	0.0	124.29	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	98.20322752334711	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
EEEWDPEYT(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	EEEWDPEYTPK	11	0	Q9NYF8-2;Q9NYF8;Q9NYF8-4;H0YF14;Q9Y2W1;A0A3B3ITZ9	Q9NYF8-2;Q9Y2W1	BCLAF1;THRAP3	Bcl-2-associated transcription factor 1;Thyroid hormone receptor-associated protein 3	1	EEEWDPEY(0.001)T(0.999)PK	104.59	0.009500399999999999	5365600.0	1813.4	1172.8	2775.3	1274.9	1729.1	1334.0	1528.1	2580.0	1954.6	4627.3	True	False	1733.6851073038515	1366.5852658085148	2192.8024567185216	1163.131496409944	1956.506957542226	1591.7766201955753	1870.8153237879076	2489.2599376420776	1863.7310726276262	3789.2511305462294	0.45752710696003324	0.36064784801199445	0.5786901900066	0.3069555055439875	0.5163307709458125	0.42007683453963024	0.4937163727963908	0.6569266200319758	0.49184680783059237	1.0	11.88769704150201	-11.847784050040183	0.32104624916738916	1.2488027116186553	0.413197370957055	0.7800213572834593	0.08623758296117129	5.1822080620425846	0.4682958145064121	1.3067366505885194	0.08053319087841006	1.4197633137936033e-12	11.847784050040183	-0.8356053406616003	
EEGAQTLEEDRAQT(ph)PHEDGGPQPHR	ddPTM_K562_Methotrexat_30min_R1	2	EEGAQTLEEDRAQTPHEDGGPQPHR	25	1	Q9BRZ2	Q9BRZ2	TRIM56	E3 ubiquitin-protein ligase TRIM56	1	EEGAQT(0.013)LEEDRAQT(0.987)PHEDGGPQPHR;EEGAQTLEEDRAQT(1)PHEDGGPQPHR	75.764	0.00073048	114230000.0	2315.4	2245.3	3096.8	2473.3	2461.09	2274.1	2293.51	2508.6	2730.3999999999996	2453.7	True	False	2213.6177883816777	2616.297661425529	2446.8240002759794	2256.4696290459765	2784.7664728110562	2713.537640169984	2807.8880003015556	2420.3711161119845	2603.4642999603348	2009.3111531608668	1.1016799388683103	1.3020868655956077	1.2177427057162635	1.1230065714293689	1.3859309288311634	1.350481549809392	1.3974381199668553	1.2045775550016111	1.2956999197783778	1.0	10.9724852754944	-6.2533064955892215	23.891862336737606	1.265939690360757	1.101679784693157	0.12136363371281222	0.11758886448856054	1070.7985417671987	3145533.4074592018	0.02855055793964045	0.2967647562552789	5.580762033942688e-07	6.2533064955892215	-0.16425990566759996	
EEGS(ph)DIEDEDMEELLNDTR	ddPTM_K562_Methotrexat_30min_R1	4	EEGSDIEDEDMEELLNDTR	19	0	F5H5U2;Q8NHQ9-2;Q8NHQ9	F5H5U2	DDX55	ATP-dependent RNA helicase DDX55	1	EEGS(1)DIEDEDMEELLNDTR;EEGS(1)DIEDEDMEELLNDTR;EEGS(1)DIEDEDMEELLNDTR;EEGS(1)DIEDEDMEELLNDTR	240.18	7.563399999999999e-70	36217600.0	7421.63	5850.86	9219.5	7627.67	6188.2	6474.819999999999	5911.47	8055.84	7486.5599999999995	8791.43	True	False	7095.38403160884	6817.615167384391	7284.45294192211	6958.964013821664	7002.056766330924	7725.987328316881	7237.267627846676	7772.511541106421	7138.511459680282	7199.216836301523	0.9855772083195059	0.9469940025985975	1.0118396358324409	0.9666279224611763	0.9726136780633647	1.0731705272939074	1.0052854070672361	1.0796329264475133	0.9915677804959092	1.0	12.813624256795123	-8.234950825227308	24.408523883900195	1.0333680177084221	0.9764677069604542	0.4200204765998201	0.031126404792957373	491.93483321554913	453305.67068722774	0.00951349331833573	0.009510151010110343	5.8216913252514716e-09	8.234950825227308	-0.056900310747967975	
EELMSS(ph)DLEETAGSTSIPK	ddPTM_K562_Methotrexat_30min_R1	2	EELMSSDLEETAGSTSIPK	19	0	O00567	O00567	NOP56	Nucleolar protein 56	1	EELMS(0.041)S(0.959)DLEETAGSTSIPK;EELMS(0.173)S(0.827)DLEETAGSTSIPK	224.64	6.258399999999997e-193	6441700.0	3695.5	2470.3	4531.7	3246.3999999999996	2482.5	2107.01	1657.46	2833.2	3046.8999999999996	3790.6	True	False	3533.05024486676	2878.475087079445	3580.558099344696	2961.7931523611583	2808.99226308402	2514.1598624574817	2029.1875967315661	2733.554750126951	2905.2502840423176	3104.085608334997	1.1381935586376613	0.9273182026134366	1.153498502016275	0.954159622533683	0.9049338895620015	0.8099518440169742	0.6537150880384397	0.8806312373559843	0.9359439946634293	1.0	11.599952631174638	-7.682190986590746	2.2993317546504244	0.8392291949471518	1.0584058382417325	0.43590753965364926	0.10414927014692668	0.2714719619933925	2.9333973512232507	0.034242692908624354	0.04615383154633119	2.0787823147739133e-08	7.682190986590746	0.21917664329458075	
EELS(ph)PVLCMASR	ddPTM_K562_Methotrexat_30min_R1	1	EELSPVLCMASR	12	0	Q9UPG8	Q9UPG8	PLAGL2	Zinc finger protein PLAGL2	1	EELS(1)PVLCMASR	89.266	0.019163	70133000.0	0.0	0.0	165.29	250.51	0.0	138.16	0.0	0.0	0.0	0.0	True	False	0.0	0.0	130.59788782149843	228.54817724186614	0.0	164.8574646523393	0.0	0.0	0.0	0.0											0.0														
EEPDSENIPQELLSNLGHPES(ph)PPR	ddPTM_K562_Methotrexat_30min_R1	4	EEPDSENIPQELLSNLGHPESPPR	24	0	D6RF40;D6RAG5;D6R9R7;A0A0A0MTL5;Q13309-2;Q13309	D6RF40	SKP2	S-phase kinase-associated protein 2	1	EEPDSENIPQELLSNLGHPES(1)PPR;EEPDSENIPQELLS(0.022)NLGHPES(0.978)PPR;EEPDSENIPQELLS(0.001)NLGHPES(0.999)PPR;EEPDSENIPQELLS(0.004)NLGHPES(0.996)PPR	146.03	4.867200000000001e-22	22041900.0	5048.42	4598.85	7177.820000000001	5162.34	5001.88	4465.63	4486.34	6646.44	6546.459999999999	7555.34	True	False	4826.497501607423	5358.731795415661	5671.293672714066	4709.765667249911	5659.714892598061	5328.54979643476	5492.515947727668	6412.6809379619435	6242.116503486058	6186.994713258518	0.7801037054815005	0.8661283941187281	0.9166475705176663	0.7612364137239432	0.9147760996901267	0.8612500969195691	0.8877518411252874	1.0364775202118386	1.0089092997137068	1.0	12.595023085841861	-9.157089683791611	3.712480598851833	1.0174779415622028	0.8538533762411293	0.7035995479051467	0.04786665035073266	0.13189660349136872	3.2884815844632134	0.02435299331438317	0.013119977003745013	6.964826724103357e-10	9.157089683791611	-0.1636245653210735	
EEPLDPEEAEGPLSLVTTANHSPDFDHDRDY(ph)EDEPVNEDME	ddPTM_K562_Methotrexat_30min_R1	2	EEPLDPEEAEGPLSLVTTANHSPDFDHDRDYEDEPVNEDME	41	1	H0Y882;A0A3B3IRW5;A0A0B4J2F3;A0A3B3IT66;C9J0F0;A0A3B3IUB6;A0A3B3IRS5;A0A3B3IST0;Q9H334-6;Q9H334-3;Q9H334-7;Q9H334;Q9H334-4;Q9H334-8	H0Y882	FOXP1	Forkhead box protein P1	1	EEPLDPEEAEGPLS(0.106)LVT(0.106)T(0.106)ANHS(0.106)PDFDHDRDY(0.576)EDEPVNEDME;EEPLDPEEAEGPLS(0.072)LVT(0.21)T(0.21)ANHS(0.241)PDFDHDRDY(0.267)EDEPVNEDME	62.405	5.533899999999999e-05	33654000.0	4184.5	3804.2	4642.3	4143.5	3891.2000000000003	3196.1000000000004	3096.7	5037.5	5285.0	5208.8	True	False	4000.5543903788275	4432.77938965617	3667.9446707831225	3780.2457881987616	4402.961004677759	3813.701091309653	3791.2138035298835	4860.328269717822	5039.301503549069	4265.435845696021	0.9379004948381844	1.0392324606473697	0.8599225972380318	0.8862507666158351	1.032241760035028	0.894094115882159	0.8888221369817003	1.1394681447669806	1.1814271004999188	1.0	12.05847744948769	-9.266727950347395	24.825544236057873	1.1203357333120127	0.9356590255790697	0.5508365794790958	0.07123069841323379	290.353680166855	1362962.5967197241	0.03726224433162786	0.018741180851433125	5.410931670208073e-10	9.266727950347395	-0.1846767077329431	
EEPS(ph)QNDISPK	ddPTM_K562_Methotrexat_30min_R1	1	EEPSQNDISPK	11	0	Q9NR30;Q9NR30-2	Q9NR30	DDX21	Nucleolar RNA helicase 2	1	EEPS(0.849)QNDIS(0.151)PK	122.55	0.0023495	32645000.0	4376.8	2957.2	7003.5	4807.5	3329.6	3097.6	2885.7	3934.2	4195.0	5559.8	True	False	4184.401112632347	3445.8270361945247	5533.561058490314	4386.033939125269	3767.500760992771	3696.167360358184	3532.891682386472	3795.8319560742134	3999.975365636393	4552.866344436477	0.919069613749064	0.7568478350798206	1.2154016041459748	0.9633566213699476	0.8275008480309533	0.8118330477403176	0.7759708752934519	0.8337235642141468	0.8785620009522775	1.0	12.152559392372162	-7.756658089266157	23.408510121781934	0.8402149119817803	0.9668769589681511	0.16271946991759034	0.1184538119792278	90.06397358373576	440932.52913971775	0.03602826113212101	0.04492224306430971	1.7512248478303552e-08	7.756658089266157	0.12666204698637074	
EEPSQNDIS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	EEPSQNDISPK	11	0	Q9NR30;Q9NR30-2	Q9NR30	DDX21	Nucleolar RNA helicase 2	1	EEPSQNDIS(1)PK	168.0	0.00012502	30309000.0	3381.9	2365.7	5073.7	3844.1	2891.8	2464.8	2064.5	3271.5	3334.7	4262.5	True	False	3233.2357253727214	2756.5917149754473	4008.7997062129393	3507.0937213502752	3272.122387265405	2941.0877162354236	2527.5166782017777	3156.439490696147	3179.6705248599937	3490.5199455305024	0.9262905744208036	0.7897367034115286	1.1484821083306163	1.0047482255017608	0.9374312246676176	0.8425930125399773	0.7241089343833089	0.9042892004493099	0.9109446656884052	1.0	11.769226239998652	-8.119340220854017	4.473660414688835	0.8614386854580874	0.9678689659583516	0.1370481919996921	0.10500828337103707	0.4280707332828918	13.738387497694049	0.03679627370410613	0.03708081044263096	7.597308801078168e-09	8.119340220854017	0.10643028050026415	
EEPVS(ph)S(ph)GPEEAVGK	ddPTM_K562_Methotrexat_30min_R1	2	EEPVSSGPEEAVGK	14	0	O00567	O00567	NOP56	Nucleolar protein 56	2	EEPVS(1)S(1)GPEEAVGK;EEPVS(1)S(1)GPEEAVGK	120.29	0.0019952000000000004	31620000.0	11067.3	8071.799999999999	17228.1	11106.5	9022.9	8047.5	6951.4	10671.400000000001	11294.2	13968.599999999999	True	False	10580.79474361085	9405.527752859118	13612.157245916616	10132.810388953683	10209.569502751583	9602.565480527652	8510.428402447009	10296.080813392899	10769.135107168187	11438.751181498512	0.9249956202146127	0.8222512758273814	1.190003788869318	0.8858318734428712	0.8925423187161325	0.8394767337940894	0.7439997834914105	0.9001053218157404	0.9414607360798801	1.0	13.481641934934697	-7.4883603597005175	24.898138601369553	0.8733958429755624	0.9758199027449168	0.1327287240548094	0.10567707422413423	1093.7044888760204	788889.8593144485	0.03002286759497651	0.0445043727560524	3.2481766519575394e-08	7.4883603597005175	0.10242405976935443	
EEPVSS(ph)GPEEAVGK	ddPTM_K562_Methotrexat_30min_R1	2	EEPVSSGPEEAVGK	14	0	O00567	O00567	NOP56	Nucleolar protein 56	1	EEPVS(0.023)S(0.977)GPEEAVGK;EEPVS(0.003)S(0.997)GPEEAVGK	181.76	1.5914e-05	82195000.0	9966.7	7582.0	16110.599999999999	10420.9	7959.8	7443.9	6826.8	9357.9	10273.0	12455.0	True	False	9528.575801789611	8834.796628035607	12729.205224375532	9507.315876491008	9006.653218810141	8882.328323143805	8357.883680672268	9028.777352891782	9795.410472272382	10199.278808582381	0.934240153702986	0.8662177781238214	1.2480495399012226	0.932155699919772	0.8830676548650986	0.8708780777391435	0.8194583006829232	0.8852368409905945	0.9604022653081945	1.0	13.316179522327953	-7.509524221426872	24.83136455331688	0.8930875247028053	1.0159954431137082	0.1922590561852684	0.10247169608273897	883.4355740180594	1642658.813365991	0.029688043303053285	0.041892587385876354	3.0936827700850124e-08	7.509524221426872	0.12290791841090287	
EEQTDT(ph)SDGESVTHHIR	ddPTM_K562_Methotrexat_30min_R1	2	EEQTDTSDGESVTHHIR	17	0	A2AB27;P36915	A2AB27	GNL1	Guanine nucleotide-binding protein-like 1	1	EEQT(0.186)DT(0.747)S(0.068)DGESVTHHIR;EEQT(0.05)DT(0.915)S(0.035)DGESVTHHIR	90.45299999999999	0.01494	62628000.0	6193.1	6164.299999999999	9429.9	5556.9	6849.8	5689.700000000001	4671.8	7412.799999999999	6753.3	7513.4	True	False	5920.858739408559	7182.84579981534	7450.69285720823	5069.73520464383	7750.668762808822	6789.153999945102	5719.570073733624	7152.087622384958	6439.34055703272	6152.65045366543	0.9623265264291454	1.1674392774151785	1.2109728828767599	0.8239920734686861	1.2597284408041376	1.1034519271122376	0.9296107615419954	1.1624401022366084	1.0465961954975835	1.0	12.586992316679623	-15.999992667760887	0.2756289458669794	0.44117158807559803	1.0834435390529165	0.02779056151555781	0.12938399656439167	989.3905054128426	9.554914531689585	315.27809669271863	0.14963070759959915	1.0000168832469997e-16	15.999992667760887	0.6422719509773185	
EES(ph)DGEYDEFGR	ddPTM_K562_Methotrexat_30min_R1	3	EESDGEYDEFGR	12	0	O95218-2;O95218	O95218-2	ZRANB2	Zinc finger Ran-binding domain-containing protein 2	1	EES(1)DGEYDEFGR;EES(1)DGEYDEFGR;EES(1)DGEYDEFGR	184.96	0.00032569	45097900.0	4691.8	3523.99	6823.700000000001	4683.9	3829.58	4138.7	3514.8999999999996	5060.2	4689.7	5822.099999999999	True	False	4485.554089802695	4106.269449911793	5391.498621377937	4273.26975922389	4333.236894606766	4938.445200902122	4303.205799085218	4882.229897851337	4471.676870613823	4767.661272697512	0.9408290214511815	0.861275416822658	1.1308476657628534	0.8963031379127532	0.9088810313395123	1.0358213216997234	0.9025821158327576	1.0240303617645645	0.9379183240683072	1.0	12.21906602516881	-8.117672701826073	0.006375034073337651	1.923989382821807	8.225918237044968e-06	0.02937736542556968	0.07698359241101022	30666.924573129458	69.87924591661461	10340.520512233366	10746.009547675263	7.626535535447957e-09	8.117672701826073	-1.92398115690357	
EES(ph)EES(ph)DEDMGFGLFD	ddPTM_K562_Methotrexat_30min_R1	2	EESEESDEDMGFGLFD	16	0	F8VWS0;Q8NHW5;P05388;F8W1K8;P05388-2	F8VWS0	RPLP0;RPLP0P6	60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0	2	EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD	98.25299999999999	0.005919	66929000.0	2369.3	1934.0299999999997	2760.0	1953.91	2339.8	2434.6000000000004	1636.46	2730.7	2259.9	2780.8	True	False	2265.1484089197174	2253.5955846108805	2180.7137176316523	1782.6137439409792	2647.5247118485363	2905.0519936492865	2003.4778121627921	2634.6597332245046	2154.837742265002	2277.170173497063	0.9947207438788452	0.9896474189059051	0.9576419641412737	0.7828197315633242	1.1626380595802017	1.2757289847986995	0.8798103169804126	1.156988513150268	0.9462787486610215	1.0	11.153026393126794	-7.780482279773966	24.997558253328606	1.0788430674287446	0.937269840221383	0.23928311719893414	0.12066893105101302	355.9286204790582	467224.232242954	0.03762025359344264	0.04272350787508771	1.657744975323706e-08	7.780482279773966	-0.14157322720736154	
EES(ph)EES(ph)EAEPVQR	ddPTM_K562_Methotrexat_30min_R1	2	EESEESEAEPVQR	13	0	Q9BW71	Q9BW71	HIRIP3	HIRA-interacting protein 3	2	EES(1)EES(1)EAEPVQR;EES(1)EES(1)EAEPVQR	120.9	0.0021819	41340000.0	6501.6	4375.1	6657.700000000001	5345.9	4642.2	4526.0	4646.5	6021.299999999999	5805.0	6868.5	True	False	6215.797448796026	5098.010911015374	5260.339752853716	4877.233247045194	5252.7306681525215	5400.585444531615	5688.59590470553	5809.527466094666	5535.126817048695	5624.5480928742	1.1051194418038468	0.9063858690219218	0.935246648440627	0.8671333530287015	0.933893813586066	0.9601812190696128	1.0113871924950688	1.0328878640854398	0.9841016070359867	1.0	12.45752147159446	-8.66440566230318	3.744855858023869	1.010105407990097	0.9421896220313297	0.17129393419985484	0.05908616893341301	0.37040756578856987	9.930279206673509	0.024330156576529312	0.018074324859197872	2.165680258527793e-09	8.66440566230318	-0.06791578595876735	
EES(ph)EESEAEPVQR	ddPTM_K562_Methotrexat_30min_R1	2	EESEESEAEPVQR	13	0	Q9BW71	Q9BW71	HIRIP3	HIRA-interacting protein 3	1	EES(0.999)EES(0.001)EAEPVQR;EES(0.633)EES(0.367)EAEPVQR	225.72	1.6602999999999998e-34	37231000.0	3049.4	3134.1000000000004	5285.8	3058.1	3126.1	3471.7	2579.1000000000004	3567.9	3023.5	3850.7000000000003	True	False	2915.352027248461	3651.956754408653	4176.382814730938	2790.001121006549	3537.2369440591956	4142.556890804334	3157.5288276823476	3442.4149346950276	2882.9381449348366	3153.3009159540884	0.924539745794089	1.1581377267014452	1.324447912218139	0.8847874641112022	1.1217568631533348	1.3137207647532518	1.001340789173297	1.091686149354846	0.9142603962560774	1.0	11.622647136015324	-9.474509372200203	1.9665180544432568	0.9649423575574202	1.1173871813023906	0.1352268584223958	0.13926389095872155	0.6973980997832506	4.880295114992955	0.11735740051320319	0.039629200707633885	3.353440675507577e-10	9.474509372200203	0.15244482374497037	
EESEES(ph)DDDMGFGLFD	ddPTM_K562_Methotrexat_30min_R1	1	EESEESDDDMGFGLFD	16	0	P05387;H0YDD8;P05386-2;P05386	P05387	RPLP2;RPLP1	60S acidic ribosomal protein P2;60S acidic ribosomal protein P1	1	EES(0.013)EES(0.987)DDDMGFGLFD	73.887	0.032117	0.0	1187.4	972.27	1449.9	1188.4	936.07	1003.0	913.89	1059.1	1066.7	1506.9	True	False	1135.203317752615	1132.9210917357136	1145.585804055845	1084.2148171100298	1059.1796123686029	1196.81555476474	1118.853096169447	1021.8508526964059	1017.1093498270185	1233.9858078404493	0.9199484390661594	0.9180989639730095	0.9283622200328951	0.878628271266322	0.8583401896835686	0.9698778925660746	0.9066985123009709	0.8280896313424443	0.8242472023296784	1.0	10.269110086705378	-9.036490328682014	24.081684526089	0.8691798357620988	0.9116572491656136	0.03128468001851292	0.05341705993545106	842.1086206133327	555742.6070542696	0.024347068375775223	0.014064575406911865	9.194109489684286e-10	9.036490328682014	0.04247741340351485	
EESEES(ph)DEDMGFGLFD	ddPTM_K562_Methotrexat_30min_R1	4	EESEESDEDMGFGLFD	16	0	F8VWS0;Q8NHW5;P05388;F8W1K8;P05388-2	F8VWS0	RPLP0;RPLP0P6	60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0	1	EES(0.009)EES(0.991)DEDMGFGLFD;EES(0.001)EES(0.999)DEDMGFGLFD;EES(0.065)EES(0.935)DEDMGFGLFD;EES(0.026)EES(0.974)DEDMGFGLFD	164.68	4.0986e-08	84957900.0	11655.0	9564.199999999999	14242.100000000002	11004.8	10523.9	10031.400000000001	9640.300000000001	11999.699999999999	11781.599999999999	14027.1	True	False	11142.660155302956	11144.521486396488	11252.877839812229	10040.026270054246	11907.977312173174	11969.82607783351	11802.382675160376	11577.663749505286	11233.875987552263	11486.656264621917	0.9700525460678714	0.970214588967968	0.9796478261885742	0.8740599560706637	1.0366791725847055	1.0420635737747042	1.0274863635913676	1.007922887460615	0.9779935717369553	1.0	13.487671273921174	-7.813517292526697	24.999994467421335	1.0176955342310545	0.9522693403532309	0.5023714238990505	0.03246465904797163	86.73801341596983	41637.993530688	0.010309362483819867	0.011689731363621109	1.536323619526186e-08	7.813517292526697	-0.06542619387782367	
EFAGEDT(ph)SDLFLEER	ddPTM_K562_Methotrexat_30min_R1	2	EFAGEDTSDLFLEER	15	0	O14980	O14980	XPO1	Exportin-1	1	EFAGEDT(0.5)S(0.5)DLFLEER;EFAGEDT(0.5)S(0.5)DLFLEER	123.1	0.0013827	13929900.0	3195.4	2421.5	3437.1	3232.6	2406.8999999999996	2707.6	2568.1000000000004	3316.6000000000004	3273.6000000000004	3906.7	True	False	3054.9340420639255	2821.6117165376195	2715.6996807506334	2949.202976935279	2723.4495379725777	3230.8053799411855	3144.061797670132	3199.953298133224	3121.4110505237877	3199.158773302994	0.9549179201599417	0.8819855207200068	0.8488793064643022	0.9218682741058061	0.8513017736724373	1.0098921650598534	0.9827776676504314	1.0002483542976548	0.9756974478953618	1.0	11.643476879420342	-8.269173235301354	24.9331548238604	0.9930545618952332	0.8905328597974862	0.7370199625154394	0.030438264755334822	293.30155643702045	945571.2208449194	0.010379866287084536	0.009323292434059044	5.380551154259304e-09	8.269173235301354	-0.10252170209774703	
EFAPS(ph)DEELDSYR	ddPTM_K562_Methotrexat_30min_R1	1	EFAPSDEELDSYR	13	0	I3L0X5;I3L4C3;O75391	I3L0X5	SPAG7	Sperm-associated antigen 7	1	EFAPS(1)DEELDSYR	153.0	3.1968e-08	4784800.0	1266.7	1279.2	1458.8	1144.7	1199.8	1062.6	1221.4	1248.6	1443.0	1472.1	True	False	1211.0173847037536	1490.5660573177452	1152.6178156815408	1044.3459282614035	1357.594730009348	1267.9324112592346	1495.330041538218	1204.6860302867835	1375.9152449614576	1205.4884250593443	1.004586489201783	1.2364830937670488	0.956141752771122	0.8663259692518341	1.126178154669976	1.0517997393436742	1.2404350058065512	0.9993343820182087	1.1413757414499632	1.0	10.235402083101777														
EFAPSDEELDS(ph)YR	ddPTM_K562_Methotrexat_30min_R1	1	EFAPSDEELDSYR	13	0	I3L0X5;I3L4C3;O75391	I3L0X5	SPAG7	Sperm-associated antigen 7	1	EFAPS(0.24)DEELDS(0.76)YR	143.55	1.2796e-06	6426000.0	1407.9	1334.3	1482.0	1485.0	1324.1	1399.6	1293.5	1502.6	1506.5	1819.3	True	False	1346.0104017718606	1554.7703957778824	1170.9484527283	1354.8123556112378	1498.2423587309356	1670.052891773408	1583.6003018910144	1449.7527063182117	1436.4631438215072	1489.8071406225556	0.9034796283829022	1.0436051441720036	0.785973177869847	0.9093877446748533	1.0056619530665258	1.1209859627035563	1.0629565792182099	0.973114349359605	0.9641940252892349	1.0	10.540909866842197	-7.812645744711218	4.982449606914651	1.028406563246225	0.9109409071632927	0.3647132685189277	0.07153671514894841	0.22701986405580435	11.979815264387787	0.023486714889408296	0.027401630524865724	1.539409829437311e-08	7.812645744711218	-0.11746565608293225	
EFDELNPS(ph)AQR	ddPTM_K562_Methotrexat_30min_R1	1	EFDELNPSAQR	11	0	H7C5W9;P16615-5;P16615-2;P16615-3;P16615-4;P16615	H7C5W9	ATP2A2	Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	1	EFDELNPS(1)AQR	96.756	0.010025	23252000.0	1415.1	1243.4	1311.8	1118.3	1016.9	1002.7	1117.5	1544.1	1453.3	1541.9	True	False	1352.8938983928958	1448.8507158137002	1036.4711068076813	1020.2603752727596	1150.640174151113	1196.4575840105717	1368.1278216955616	1489.7931277957882	1385.7364002096242	1262.6469686835155	1.0714743962071007	1.1474709493219057	0.8208716549554196	0.8080329661239534	0.9112920734691303	0.9475788670035336	1.083539465605358	1.1798968078536665	1.0974852310891352	1.0	10.302235608091255	-8.795707873898388	4.727587417661924	1.108376344647065	0.9452118040889295	0.29340443360618496	0.10458508915154749	0.25629917789096124	13.259310434211457	0.04914512981579409	0.03372965676132142	1.6006343255981097e-09	8.795707873898388	-0.16316454055813545	
EFGSLPTT(ph)PSEQR	ddPTM_K562_Methotrexat_30min_R1	1	EFGSLPTTPSEQR	13	0	O15400-2;O15400	O15400-2	STX7	Syntaxin-7	1	EFGSLPT(0.014)T(0.98)PS(0.005)EQR	183.89	4.693699999999999e-82	0.0	2801.3	2548.0	2887.2	3011.9	2816.0	2145.1	2176.6	2641.6	3000.8	3247.1	True	False	2678.158206181911	2969.013691405266	2281.2161759225014	2747.851403276423	3186.3533586483754	2559.6102158782087	2664.7579567808125	2548.693430726868	2861.293462980141	2659.018724957676	1.007197949019535	1.1165824683887942	0.857916551888446	1.0334080679782203	1.1983192629450523	0.9626145885523805	1.002158402183959	0.9585090194381523	1.0760711972894004	1.0	11.376678221432117	-11.801631369499574	12.83696631860173	0.9999957438062204	1.0225835554243183	0.0062669767342909966	0.0884126017211892	0.0	0.0	0.08550639251991016	0.02073834635441844	1.5789509194969546e-12	11.801631369499574	0.022587811618097975	
EFGYDSPHDLDS(ph)D	ddPTM_K562_Methotrexat_30min_R1	2	EFGYDSPHDLDSD	13	0	Q96CW6	Q96CW6	SLC7A6OS	Probable RNA polymerase II nuclear localization protein SLC7A6OS	1	EFGYDSPHDLDS(1)D;EFGYDSPHDLDS(1)D	95.417	0.0093663	39341000.0	7549.5	5613.4	9547.4	6010.299999999999	7575.6	6761.7	6266.6	9659.2	8188.700000000001	10049.2	True	False	7217.633019516062	6540.918938514257	7543.531212940739	5483.386330592743	8571.924184579771	8068.302828168237	7672.044570413792	9319.480461113322	7808.009124335333	8229.192501261034	0.8770767020470159	0.7948433503666287	0.9166793961600456	0.6663334622142421	1.0416482763364958	0.9804489112305804	0.9322961601928907	1.1324902728530428	0.9488183832300485	1.0	13.006535156186075	-7.787514924000184	24.99445582029353	1.0076171231416544	0.8197371693419921	0.5822101931793963	0.07969704380972135	154.1468697403218	147755.0458994767	0.023604013728949703	0.026772755644815814	1.6311168569233613e-08	7.787514924000184	-0.18787995379966227	
EFHLNESGDPSSK	ddPTM_K562_Methotrexat_30min_R1	1	EFHLNESGDPSSK	13	0	Q01105-2;A0A0C4DFV9;A0A087X027;Q01105-3;Q01105-4;Q01105;P0DME0	Q01105-2	SET;SETSIP	Protein SET;Protein SETSIP	0		142.1	1.955e-15	0.0	5102.9	3453.2	6451.0	4859.3	3929.6	3585.7	2868.9	5348.8	5029.7	6577.8	False	True	4878.582626039935	4023.782605636056	5097.023258131083	4433.292713549957	4446.411277750235	4278.585777387763	3512.323854731453	5160.6796722713	4795.870344825114	5386.49667981479	0.9057060490395924	0.747012918566286	0.9462594263227764	0.823038233767628	0.8254736876405392	0.7943169803522239	0.6520608966294251	0.9580772028710774	0.8903505617662455	1.0	12.395131549122617														
EFITGDVEPTDAES(ph)EWHSENEEEEK	ddPTM_K562_Methotrexat_30min_R1	1	EFITGDVEPTDAESEWHSENEEEEK	25	0	E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PKT8;C9JZI7	E9PNJ7	NAP1L4	Nucleosome assembly protein 1-like 4	1	EFITGDVEPT(0.002)DAES(0.911)EWHS(0.087)ENEEEEK	126.9	1.2637e-10	19889000.0	1006.8	937.3	1821.0	1090.1	947.85	715.13	757.36	1011.0	1031.7	1472.7	True	False	962.5422775082806	1092.1728936240795	1438.7969854374044	994.5326254894342	1072.5088888476084	853.3187514246345	927.2172590956155	975.442556959745	983.7364921876205	1205.9797592452255	0.7981413204734856	0.9056311975813149	1.1930523496827923	0.8246677590276245	0.8893257789988522	0.7075730292179137	0.7688497688186108	0.8088382491346584	0.8157155911168043	1.0	10.235989978399598	-7.472435236156955	24.999660032903872	0.8168251674433762	0.9678188839359868	0.2128580269679743	0.11683319158161787	500.441696577362	248017.03972070635	0.03295095572862976	0.04887341886499278	3.369494593337606e-08	7.472435236156955	0.15099371649261062	
EFITGDVEPTDAES(ph)EWHSENEEEEKLAGDMK	ddPTM_K562_Methotrexat_30min_R1	1	EFITGDVEPTDAESEWHSENEEEEKLAGDMK	31	1	E9PNJ7;C9J6D1;Q99733;Q99733-2;A8MXH2;E9PKT8;C9JZI7	E9PNJ7	NAP1L4	Nucleosome assembly protein 1-like 4	1	EFIT(0.004)GDVEPT(0.186)DAES(0.621)EWHS(0.189)ENEEEEKLAGDMK	56.783	0.0013510999999999998	20099000.0	1091.0	696.52	1783.6	1010.5	674.38	485.01	497.22	922.58	683.87	1527.1	True	False	1043.040946326514	811.6080911842997	1409.2467343361645	921.9110339024619	763.0727904848345	578.7313182616609	608.7342420612684	890.1323384766786	652.0770329672847	1250.5273920984473	0.834080846942696	0.6490126456345597	1.1269219236944328	0.7372177848543159	0.6102007803318569	0.4627897972634737	0.4867820136588788	0.7118055502830627	0.5214416230204018	1.0	10.28832094394968	-7.576869574765445	4.654107705441176	0.6042978119487595	0.8603486894446822	0.24779014499409835	0.18069734321939107	0.25160593683647137	11.476254733172775	0.05229719428337823	0.06942245669382087	2.6492956429027776e-08	7.576869574765445	0.2560508774959227	
EFITGDVEPTDAESEWHS(ph)ENEEEEKLAGDMK	ddPTM_K562_Methotrexat_30min_R1	6	EFITGDVEPTDAESEWHSENEEEEKLAGDMK	31	1	E9PNJ7;C9J6D1;Q99733;Q99733-2;A8MXH2;E9PKT8;C9JZI7	E9PNJ7	NAP1L4	Nucleosome assembly protein 1-like 4	1	EFITGDVEPT(0.001)DAES(0.035)EWHS(0.965)ENEEEEKLAGDMK;EFITGDVEPT(0.008)DAES(0.122)EWHS(0.87)ENEEEEKLAGDMK;EFITGDVEPT(0.007)DAES(0.204)EWHS(0.789)ENEEEEKLAGDMK;EFITGDVEPT(0.013)DAES(0.134)EWHS(0.853)ENEEEEKLAGDMK;EFITGDVEPT(0.014)DAES(0.261)EWHS(0.724)ENEEEEKLAGDMK;EFITGDVEPT(0.008)DAES(0.092)EWHS(0.9)ENEEEEKLAGDMK	75.005	5.7834e-06	548276000.0	15543.800000000001	10149.1	27272.800000000003	17085.399999999998	10075.2	8772.890000000001	8125.929999999999	12871.4	12999.699999999999	21709.199999999997	True	False	14860.513163620599	11826.066269796378	21548.61198486396	15587.549508794778	11400.265397391388	10468.126831744805	9948.37665337863	12418.705566421024	12395.34678442513	17777.453513550918	0.8359191125035499	0.6652283613500619	1.2121315332614127	0.8768156528668811	0.6412766254009046	0.5888428746988675	0.5596063938963727	0.6985649298396325	0.6972509743859963	1.0	14.117761063307595	-7.722959595451423	6.618505998092526	0.670129543435121	0.905230080562227	0.24156848891083327	0.16945016633073604	0.2437869519789439	28.980866665065808	0.050420800153024574	0.06426325231946099	1.8925196808554168e-08	7.722959595451423	0.235100537127106	
EFKT(ph)T(ph)NR	ddPTM_K562_Methotrexat_30min_R1	1	EFKTTNR	7	1	O60264	O60264	SMARCA5	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5	2	EFKT(1)T(1)NR	79.454	0.026996	14259000.0	1512.2	1514.6	1872.7	1712.5	1364.4	1493.7	1417.0	2141.7	1540.8	1693.5	True	False	1445.7254986571547	1764.8619062018906	1479.6458619597083	1562.3677838277736	1543.8425151064787	1782.3363849970988	1734.7983206645279	2066.375197072884	1469.1685443081178	1386.79073964948	1.0424972256611484	1.2726230827355902	1.0669568375786083	1.126606732478378	1.1132483589389228	1.2852237428752917	1.2509445520980396	1.4900410984826544	1.0594017556530984	1.0	10.437534392693912	-8.255763671254742	24.42922137689292	1.249863693724435	1.129554627112195	0.0777412616347859	0.13779874781623086	649.635570386525	2796142.7292489395	0.04384174646667752	0.04268254102213278	5.5492760412586085e-09	8.255763671254742	-0.12030906661223995	
EFVSISS(ph)PAHVAT	ddPTM_K562_Methotrexat_30min_R1	1	EFVSISSPAHVAT	13	0	A0A0U1RR39;P22681	A0A0U1RR39	CBL	E3 ubiquitin-protein ligase CBL	1	EFVSIS(0.097)S(0.903)PAHVAT	122.55	0.0010567999999999999	16970000.0	2389.3	1792.2	2317.9	2440.7	1821.7	2039.5	1833.2	1963.5	2254.4	2221.5	True	False	2284.2692328670414	2088.33058780868	1831.4044659776837	2226.7276204312097	2061.285480628463	2433.6045104114523	2244.3417653085494	1894.4425920776057	2149.593436064525	1819.1648232248706	1.2556691970426686	1.1479611749014877	1.006728165912485	1.224038411474912	1.1330944037134472	1.3377592174948458	1.233720956262753	1.04138040044073	1.181637534225127	1.0	10.829060547209759	-12.339600129466554	6.3426395318265145	0.9999889320657092	1.1709015033707655	0.2359140766670803	0.09359293347650234	1.5117262739208275e-05	1.573960293650607e-06	0.09352346967405856	0.022681304822686415	4.575092409427737e-13	12.339600129466554	0.17091257130505633	
EGDPVSLSTPLETEFGSPSELS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	EGDPVSLSTPLETEFGSPSELSPR	24	0	E9PMR3;E9PMG4;Q9BUR4	E9PMR3	WRAP53	Telomerase Cajal body protein 1	1	EGDPVSLSTPLETEFGSPS(0.003)ELS(0.997)PR;EGDPVSLSTPLETEFGS(0.004)PS(0.143)ELS(0.853)PR;EGDPVSLSTPLETEFGSPS(0.009)ELS(0.991)PR;EGDPVSLSTPLETEFGSPS(0.033)ELS(0.967)PR	207.22	1.0079000000000001e-35	32763300.0	9489.2	8325.6	11967.1	9787.2	8605.6	7641.0	8234.599999999999	10202.800000000001	10477.400000000001	12257.6	True	False	9072.06613004726	9701.263888996737	9455.369250097727	8929.171371608289	9737.38723834676	9117.515108631476	10081.418667144768	9843.961740997904	9990.307960886474	10037.629861427498	0.9038056050372313	0.9664895022954229	0.9419922213343135	0.8895696987115671	0.9700882950232598	0.9083334646227762	1.0043624646775968	0.9807057917951507	0.9952855503545839	1.0	13.293131032221108	-8.768933233932225	24.999964132238173	0.9934806118080864	0.9322261843684397	0.6188856046514111	0.02495682728363135	120.0428772367219	400466.17929430265	0.009918683321433431	0.006833904587330939	1.7024202090870156e-09	8.768933233932225	-0.06125442743964671	
EGDVLTLLESER	ddPTM_K562_Methotrexat_30min_R1	2	EGDVLTLLESER	12	0	P62857	P62857	RPS28	40S ribosomal protein S28	0	;	155.53	1.8805e-06	26436000.0	2375.2	1959.77	3182.3999999999996	2457.22	2149.86	2046.02	2088.8999999999996	2437.15	2527.16	2925.6	False	True	2270.789051984176	2283.588682105689	2514.4577300691926	2241.799337680166	2432.60427259368	2441.3844081353445	2557.3889993197845	2351.4340531102293	2409.6728831994446	2395.745490356372	0.9478423568466746	0.9531850070459698	1.049551273368008	0.9357418585171556	1.0153850992877482	1.0190499858865156	1.0674710688652356	0.9815041132605654	1.0058133858121134	1.0	11.22625893765376	-7.942983909377118	24.652300228690457	1.0169403542502877	0.9758013763247235	0.25955316839208276	0.03544197381655609	108.60142113374857	46955.708403426084	0.011066215917777183	0.012547908953586621	1.1402920346307856e-08	7.942983909377118	-0.0411389779255642	
EGDVLTLLESEREAR	ddPTM_K562_Methotrexat_30min_R1	4	EGDVLTLLESEREAR	15	1	P62857	P62857	RPS28	40S ribosomal protein S28	0	;;;	194.86	1.9784999999999998e-08	50031900.0	8761.26	7206.36	11519.470000000001	11256.390000000001	7839.09	7967.2699999999995	7585.360000000001	8021.52	8487.89	11205.08	False	True	8376.125500836513	8397.088502823879	9101.69066987184	10269.559765372915	8870.06773801382	9506.832168504954	9286.570070314678	7739.3985949591815	8093.2898465390845	9175.731432554827	0.9128564368305975	0.9151410505577376	0.9919308053829587	1.1192088435519445	0.9666878115616446	1.0360843970187932	1.0120795424947382	0.8434639409235932	0.8820321198400252	1.0	13.16360744992694	-11.485204332230763	5.311354946141894	0.9999999892080836	0.9683250372831907	0.01676078233011913	0.07666399838516623	15014277.250519563	4058334.743266171	0.09997484136801277	0.020278967536792345	3.2718671981140677e-12	11.485204332230763	-0.03167495192489289	
EGEEPTVY(ph)SDEEEPKDESAR	ddPTM_K562_Methotrexat_30min_R1	1	EGEEPTVYSDEEEPKDESAR	20	1	O00264-2;O00264	O00264-2	PGRMC1	Membrane-associated progesterone receptor component 1	1	EGEEPT(0.012)VY(0.871)S(0.117)DEEEPKDESAR	113.14	0.00041046	136480000.0	4599.1	2615.7	6126.6	3710.2	3009.9	2379.6	2336.4	4235.3	4232.8	5575.6	True	False	4396.9290708068465	3047.8999657020236	4840.710384942781	3384.9325264571153	3405.7546073138305	2839.4240220520164	2860.397174594642	4086.3420984091053	4036.0180518869415	4565.804811331349	0.9630129303588737	0.6675493350346009	1.0602096640069185	0.7413660167987116	0.7459264572286309	0.6218890511931597	0.6264825792586992	0.8949883464723853	0.8839664021270488	1.0	12.156653470167894	-12.318885376045639	5.0849750103260325	1.0000710791619365	0.7933701116892992	0.15230003760372834	0.14019963721432932	0.00011495563193003885	1.5397896324857328e-05	0.13812839276092567	0.03348955949334214	4.798600820720814e-13	12.318885376045639	-0.20670096747263733	
EGEEPTVYS(ph)DEEEPKDESAR	ddPTM_K562_Methotrexat_30min_R1	1	EGEEPTVYSDEEEPKDESAR	20	1	O00264-2;O00264	O00264-2	PGRMC1	Membrane-associated progesterone receptor component 1	1	EGEEPT(0.065)VY(0.002)S(0.933)DEEEPKDESAR	136.62	1.8452000000000002e-09	112600000.0	1898.2	1034.4	2740.4	1593.8	1011.9	1007.7	1047.6	1747.4	1943.6	2228.1	True	False	1814.7574008405038	1205.317018206282	2165.2274897818047	1454.0740285341344	1144.9825865114676	1202.4237632466875	1282.5509673452082	1685.9429515642516	1853.242460226674	1824.5694992695626	0.9946222391457344	0.6606035115071317	1.1867059548285879	0.7969408833789284	0.6275357485532029	0.6590177922671944	0.7029334688860343	0.9240223253974114	1.0157149184882188	1.0	10.833340390005917	-11.929866060104864	19.710132048422047	0.9999999998396849	0.8312367715256832	0.06539040776884653	0.1770880107276934	0.0	0.0	0.17718958603039642	0.0429747869978113	1.1752599586328102e-12	11.929866060104864	-0.1687632283140017	
EGILNIS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	EGILNISR	8	0	Q8WXG9-4;Q8WXG9-3;Q8WXG9	Q8WXG9-4	GPR98	G-protein coupled receptor 98	1	EGILNIS(1)R	81.95	0.032091	119830000.0	150.68	0.0	168.68	0.0	116.55	126.08	61.702	0.0	94.12899999999999	0.0	True	False	144.0562876191376	0.0	133.27637314858953	0.0	131.87836788013794	150.44317561788463	75.54024416488551	0.0	89.75296333539643	0.0											0.0														
EGIQWEAKEDNS(ph)EGEEILEEVGGDLEEEDDHHMEFCR	ddPTM_K562_Methotrexat_30min_R1	1	EGIQWEAKEDNSEGEEILEEVGGDLEEEDDHHMEFCR	37	1	Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;F5GWX5;A0A2R8YFD8;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8YDJ9;A0A2R8Y425;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3	Q14839-2	CHD4	Chromodomain-helicase-DNA-binding protein 4	1	EGIQWEAKEDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR	52.777	0.00073841	7283800.0	1063.3	823.77	1918.5	1250.7	1030.8	1146.8	949.37	1102.4	1491.5	2025.2	True	False	1016.5586051594703	959.8839908041277	1515.8330678537407	1141.0530728370206	1166.3682677893278	1368.4028695954162	1162.2903893361213	1063.6279671537322	1422.160490547481	1658.4166554107626	0.6129693655950925	0.5787954357985993	0.9140242670068299	0.6880376346403736	0.7033023118671209	0.825126101532359	0.7008434132303387	0.6413514744220228	0.8575411287070288	1.0	10.695590795222204	-15.999999999623714	0.17932461183658582	2.128878589804569	0.6661671245831523	0.448040510681051	0.09825189536787625	133.26273673197878	1.2808856594274054	53.50792602565547	0.31790395932167764	1.0000000008664298e-16	15.999999999623714	-1.4627114652214166	
EGKDVNSSS(ph)PVMLAFK	ddPTM_K562_Methotrexat_30min_R1	1	EGKDVNSSSPVMLAFK	16	1	Q9NRI2;C4P0D4;Q5VVQ1;C4P0D6;C4P0D8;Q99598	Q9NRI2	TRAX;DISC1;TSNAX	Translin-associated protein X	1	EGKDVNS(0.005)S(0.025)S(0.97)PVMLAFK	88.264	0.011215000000000001	8796400.0	3548.6	2236.3	5001.3	3544.8	1722.1	1708.3	1773.1	2919.5	2756.2	4929.4	True	False	3392.607792973665	2605.810564399372	3951.595476808398	3234.032887657049	1948.5863348467217	2038.4047978111707	2170.762810423625	2816.8195302116465	2628.064863591663	4036.637893137374	0.8404538338059466	0.6455398362160427	0.9789323643635326	0.8011699273683127	0.48272507627188543	0.5049758863128723	0.5377650579245925	0.6978132804531411	0.6510529141243003	1.0	11.978938460233127	-7.652684706217868	8.693430146099717	0.6184403036107112	0.8179492691320573	0.21029095407363463	0.1571497617207216	0.3535789037865682	26.060468988190717	0.04527710333642191	0.05845810735083331	2.2249245791480726e-08	7.652684706217868	0.19950896552134612	
EGLISQDGSS(ph)LEALLR	ddPTM_K562_Methotrexat_30min_R1	1	EGLISQDGSSLEALLR	16	0	J3KMZ8;Q92785;Q92785-2	J3KMZ8	DPF2	Zinc finger protein ubi-d4	1	EGLISQDGS(0.386)S(0.614)LEALLR	193.42	4.6902000000000005e-11	8861000.0	1395.7	911.74	1376.9	1408.2	1089.2	1030.7	1147.3	1369.6	1685.4	1361.4	True	False	1334.3466991639934	1062.3895380697957	1087.9075064518197	1284.745292371545	1232.4488914203873	1229.868187732818	1404.6112302741099	1321.43039170333	1607.0461218697437	1114.837267764276	1.1968981821355213	0.9529548112437428	0.9758442222097025	1.1524061219697177	1.1054966738705934	1.103181803564235	1.2599248974614512	1.1853123589538421	1.4415073556812075	1.0	10.122617420705886	-8.451213124142232	1.2822501853437538	1.2405760394641963	1.0549648111811787	0.22140003402791797	0.12313661542048537	0.5772240318610774	1.9325728129116877	0.06364860102522396	0.04865399304697963	3.538236642951223e-09	8.451213124142232	-0.18561122828301757	
EGMNPSYDEYADS(ph)DEDQHDAYLER	ddPTM_K562_Methotrexat_30min_R1	10	EGMNPSYDEYADSDEDQHDAYLER	24	0	Q08945;A0A0U1RRK2	Q08945	SSRP1	FACT complex subunit SSRP1	1	EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSY(0.004)DEY(0.01)ADS(0.986)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPS(0.018)Y(0.044)DEY(0.364)ADS(0.574)DEDQHDAYLER;EGMNPSY(0.001)DEY(0.01)ADS(0.988)DEDQHDAYLER;EGMNPS(0.002)Y(0.005)DEY(0.041)ADS(0.952)DEDQHDAYLER;EGMNPS(0.004)Y(0.05)DEY(0.363)ADS(0.583)DEDQHDAYLER	121.41	1.4772e-08	4657202000.0	19917.75	17746.95	24194.399999999998	21379.3	19355.73	19346.350000000002	17426.9	20705.030000000002	20531.300000000003	23114.400000000005	True	False	19042.18955884045	20679.331840928062	19116.326076038855	19505.009962504602	21901.34776086334	23084.758332924033	21335.32593817127	19976.822359177288	19576.804344336222	18928.15817688452	1.006024430950455	1.0925168549247497	1.0099411626527999	1.0304758540281296	1.1570775960446982	1.2195987648241255	1.1271739034929682	1.0554023361646152	1.0342688475756634	1.0	14.208246414555626	-6.258818884430351	23.28107961744312	1.0868448637534736	1.006024357916903	0.09502340701352663	0.06678426715660782	235.75753016001454	2094185.4549925071	0.018248700945109043	0.11931620800746716	5.510374498523765e-07	6.258818884430351	-0.08082050583657052	
EGNTTEDDFPS(ph)SPGNGNK	ddPTM_K562_Methotrexat_30min_R1	2	EGNTTEDDFPSSPGNGNK	18	0	Q15007	Q15007	WTAP	Pre-mRNA-splicing regulator WTAP	1	EGNTTEDDFPS(0.5)S(0.5)PGNGNK;EGNTTEDDFPS(0.958)S(0.042)PGNGNK	250.38	4.5581e-84	78596000.0	10520.4	7070.4	15070.1	10901.6	7672.4	6515.1	6057.7	9355.3	9918.0	12246.599999999999	True	False	10057.935812771275	8238.66342374874	11907.091955101723	9945.8736538259	8681.455081283313	7774.050868243022	7416.293427727254	9026.268796365484	9456.914344787068	10028.622068019675	1.0029230082211473	0.8215149965637908	1.1873108662726768	0.991748775292106	0.8656677878975667	0.7751863432000028	0.7395127044798219	0.9000507482627549	0.9429923952308734	1.0	13.291835772917334	-7.764257683176185	5.661338666785819	0.8535161494480019	1.0022810910607474	0.24981025604619445	0.10850267693083662	0.21879501505419796	23.24809997546234	0.03409283285474123	0.04131709429827103	1.7208472289247596e-08	7.764257683176185	0.14876494161274545	
EGNTTEDDFPSS(ph)PGNGNK	ddPTM_K562_Methotrexat_30min_R1	1	EGNTTEDDFPSSPGNGNK	18	0	Q15007	Q15007	WTAP	Pre-mRNA-splicing regulator WTAP	1	EGNTTEDDFPS(0.099)S(0.901)PGNGNK	178.0	1.4623e-11	65027000.0	2872.1	1664.2	4132.7	2957.5	1859.6	1522.4	1711.4	2071.1	2368.2	2699.0	True	False	2745.845922955438	1939.1807634366726	3265.3027466870744	2698.2205668149736	2104.169994936976	1816.5822538124028	2095.22501480965	1998.2582390893456	2258.1028989034803	2210.1849461552674	1.2423602503184092	0.877383934231377	1.4773889182293272	1.220812118691094	0.9520334479688181	0.821914137535161	0.9479862843398711	0.9041135867681211	1.02168051720358	1.0	11.109951382666607	-7.782569312290649	7.28751611012826	0.9300435536852922	1.2008825034651527	0.44131661078368434	0.1447686422162365	0.15734207201130193	34.85743457150688	0.04490008873370908	0.052459810046658194	1.6497976768101956e-08	7.782569312290649	0.27083894977986045	
EGPGEEHFEDMAS(ph)DEDMKPK	ddPTM_K562_Methotrexat_30min_R1	3	EGPGEEHFEDMASDEDMKPK	20	1	Q99856	Q99856	ARID3A	AT-rich interactive domain-containing protein 3A	1	EGPGEEHFEDMAS(1)DEDMKPK;EGPGEEHFEDMAS(1)DEDMKPK;EGPGEEHFEDMAS(1)DEDMKPK	80.545	0.0015635999999999998	63601000.0	7846.200000000001	5055.2	14263.0	8595.5	5215.0	4519.5	4148.97	6920.200000000001	6545.6	11079.2	True	False	7501.29044277461	5890.485876291958	11269.39121542763	7841.945860374677	5900.863908150313	5392.829411524668	5079.482137253004	6676.812643593303	6241.296484698347	9072.649520356961	0.8268026254010387	0.6492575143650208	1.242127913146174	0.8643501374961233	0.6504013954148804	0.5944051293312264	0.559867558628359	0.7359275400876066	0.6879243456604708	1.0	13.147308212668706	-7.699119813988361	5.714837667224064	0.678891767074736	0.9063037942106288	0.2107899119492228	0.17733460907059836	0.28080595029495775	17.758051833463135	0.05304282588853107	0.0681101507809986	1.9993102200319194e-08	7.699119813988361	0.2274120271358928	
EGPLGWSSDGSLGSVLLDSPS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	1	EGPLGWSSDGSLGSVLLDSPSSPR	24	0	C9JRJ5;Q9UGP4	C9JRJ5	LIMD1	LIM domain-containing protein 1	1	EGPLGWSSDGSLGSVLLDS(0.117)PS(0.661)S(0.222)PR	124.16	6.842000000000001e-10	1877400.0	654.64	505.32	583.57	576.6	588.24	464.63	556.83	698.21	787.47	992.84	True	False	625.8628094438033	588.8155410286146	461.0866319559072	526.0503732292523	665.6038706290208	554.4131716952551	681.7133019729212	673.6535585508046	750.8606915799028	813.0270551836958	0.7697933364620879	0.7242262570162284	0.5671233558786417	0.647026897660123	0.8186737038887764	0.6819123277145933	0.8384878432106967	0.8285745895609821	0.9235371526600095	1.0	9.667159551582898	-9.383489717699868	0.6942926870996982	0.9986483944935697	0.6822319850488658	0.7070483965403698	0.0667546375290733	0.3840654138446901	0.37231861927331467	0.06579584398948593	0.03117460077160483	4.135331049881542e-10	9.383489717699868	-0.31641640944470384	
EGPMHQWVSY(ph)QGRVPY(ph)PRPGMCPSK	ddPTM_K562_Methotrexat_30min_R1	1	EGPMHQWVSYQGRVPYPRPGMCPSK	25	2	B4DEK9;A0A0C4DGV8;Q13214-2;Q13214	B4DEK9	SEMA3B	Semaphorin-3B	2	EGPMHQWVS(0.135)Y(0.864)QGRVPY(0.961)PRPGMCPS(0.039)K	51.044	0.008454799999999998	19647000.0	667.43	541.87	606.88	528.39	500.16	474.41	426.28	685.87	619.14	777.81	True	False	638.0905763581171	631.4048072848394	479.50418150590474	482.06686907839884	565.9398067690245	566.0830182810967	521.8841412370327	661.747563345183	590.3563165387644	636.9410718669986	1.0018047265938574	0.9913080427268862	0.7528234599480048	0.7568468895644721	0.8885277332016671	0.8887525758415874	0.8193601642099927	1.0389462896551351	0.9268617500333505	1.0	9.315016094033652	-9.260620581643591	24.99994698616561	0.9871780160206509	0.8683280564007001	0.29627396868032585	0.08271331188270992	102.20953992126063	3120844.396533285	0.04511423390129142	0.024072396702252575	5.487561725792814e-10	9.260620581643591	-0.11884995961995082	
EGS(ph)PRTYS(ph)RLS(ph)VPMPLPTVLLDR	ddPTM_K562_Methotrexat_30min_R1	1	EGSPRTYSRLSVPMPLPTVLLDR	23	2	Q8TDJ6-2;Q8TDJ6;Q8TDJ6-3	Q8TDJ6-2	DMXL2	DmX-like protein 2	3	EGS(0.679)PRT(0.327)Y(0.29)S(0.714)RLS(0.989)VPMPLPT(0.001)VLLDR	42.705	0.030050999999999998	0.0	2457.0	1820.7	3139.5	2262.4	1695.3	1949.0	1756.5	2362.7	2084.2	2814.2	True	False	2348.9932219287307	2121.5397283915095	2480.5618538060025	2064.058904602601	1918.2616650982213	2325.6166662377623	2150.439837859736	2279.602501808892	1987.3059969152257	2304.5211098444447	1.0192977672863617	0.920598956255477	1.0763892954634036	0.8956563234701397	0.8323905808038808	1.00915398704885	0.933139570157763	0.9891870775541585	0.8623509623868748	1.0	11.170251267753619	-7.289834848883776	24.895459622460738	0.9303961150716398	0.9969457536186481	0.20803750802055576	0.0652634797943286	1132.0472313486737	992508.3689257873	0.018098871137054454	0.026850740131931936	5.130564491836729e-08	7.289834848883776	0.06654963854700835	
EGSQGELT(ph)PANSQSR	ddPTM_K562_Methotrexat_30min_R1	1	EGSQGELTPANSQSR	15	0	C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0	C9JFE4	GPS1	COP9 signalosome complex subunit 1	1	EGS(0.023)QGELT(0.977)PANSQSR	202.79	1.12e-12	5582400.0	1613.6	1537.4	2019.4	1486.9	1325.1	1119.4	1354.8	1456.0	1586.7	1824.2	True	False	1542.6680760700854	1791.429218668155	1595.555536733825	1356.5457855611785	1499.373876258866	1335.7082073815052	1658.6483873227276	1404.791654731344	1512.9346633266427	1493.8197031405855	1.0327003137171118	1.1992271991739563	1.0681044930518397	0.9081054311368338	1.0037181013924261	0.8941562389178099	1.1103404137966641	0.9404024138776117	1.0127960289624445	1.0	10.544790316938132	-7.009115690627621	23.734595740131276	0.9820531782280713	1.1203893025767737	0.39766687806291656	0.06857688758620219	194.44328081036844	506282.7768017307	0.017124980017069948	0.032839927252505396	9.792290962562987e-08	7.009115690627621	0.13833612434870246	
EGSQGELTPANSQS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	EGSQGELTPANSQSR	15	0	C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0	C9JFE4	GPS1	COP9 signalosome complex subunit 1	1	EGSQGELT(0.101)PANS(0.004)QS(0.894)R	84.195	0.022358000000000003	8235900.0	1980.5	2114.7	2631.1	1907.1	1987.4	1970.6	1518.0	2164.7	1944.9	2694.5	True	False	1893.4395913837402	2464.118231245963	2078.868066108927	1739.907503963766	2248.777935006317	2351.3905605377813	1858.4501416857834	2088.566274036359	1854.4820235104214	2206.4999397611596	0.8581190315322165	1.1167542707989782	0.9421564119027133	0.7885372995532919	1.0191606600495686	1.065665363576808	0.8422615873204825	0.9465517022685411	0.8404632105773626	1.0	11.107543992589502	-8.78751053662745	24.9998102969524	0.9028651583614637	0.9653540966500709	0.07473714699595269	0.09904125817487631	639.22293050565	612948.8199121344	0.04183548151194313	0.028215667427639347	1.631133335036878e-09	8.78751053662745	0.06248893828860713	
EGSRTDDEVVQREEEAIQLDGLNASQIR	ddPTM_K562_Methotrexat_30min_R1	2	EGSRTDDEVVQREEEAIQLDGLNASQIR	28	2	P14625;Q96GW1;A0A1W2PRR1	P14625	HSP90B1	Endoplasmin	0	;	72.425	0.00034446	25457800.0	1197.34	931.8199999999999	1318.02	1472.61	977.71	1156.48	1252.35	1062.45	1321.9299999999998	1781.25	False	True	1144.706367254435	1085.7874167681528	1041.3856138090105	1343.5085676745211	1106.2960022315713	1379.9533925965354	1533.221366890771	1025.083031297608	1260.4737628356886	1458.6483643345941	0.7847719815437677	0.744379141208215	0.7139387663757258	0.9210640484195124	0.7584391339829467	0.9460493881443744	1.0511247291530714	0.7027622670150733	0.8641381937247715	1.0	10.510416420026583	-7.2602185325770465	24.992033869756472	0.8828795345463394	0.7473648768664248	0.30494706359486157	0.09913452187568517	148.01908192815276	3030077.4243460726	0.02785140172205976	0.04498824629837886	5.492644200256236e-08	7.2602185325770465	-0.13551465767991455	
EGSTQQLQTT(ph)SPK	ddPTM_K562_Methotrexat_30min_R1	1	EGSTQQLQTTSPK	13	0	A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6;Q5T8P6-5;Q5T8P6-4	A0A087X0H9	RBM26	RNA-binding protein 26	1	EGSTQQLQT(0.001)T(0.499)S(0.499)PK	125.22	0.0019414999999999999	13049000.0	1585.9	1344.9	2362.3	1816.9	1225.3	1167.8	1170.1	1538.4	1769.7	2062.5	True	False	1516.1857349030417	1567.1218656086899	1866.4855127395836	1657.6151979192307	1386.4484269715401	1393.4608223871016	1432.524710663067	1484.2936000265784	1687.4270332697793	1688.9612639663735	0.8977030836944218	0.9278613423782409	1.1051085377507772	0.9814406246514326	0.8208882326380836	0.8250401309469255	0.848169073634591	0.8788203919732585	0.9990916128573658	1.0	10.721920525220296	-6.2577349050241065	19.14696359545103	0.9255852188383865	0.8977027951800078	0.009148245910854391	0.08691683496282004	132.3353728675524	683007.7687663307	0.023977957749196605	0.16236718524673927	5.524145322852581e-07	6.2577349050241065	-0.027882423658378674	
EGT(ph)GQQERESPRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGR	ddPTM_K562_Methotrexat_30min_R1	1	EGTGQQERESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR	48	2	Q6PKG0;A0A0B4J210	Q6PKG0	LARP1	La-related protein 1	2	EGT(0.569)GQQERES(0.506)PRPLQLPGAEGPAIS(0.925)DGEEGGGEPGAGGGAAGAAGAGR	40.602	0.003911400000000001	36151000.0	190.4	234.18	231.36	135.63	281.67	212.73	270.98	459.46	266.27	299.44	True	False	182.03024397852275	272.8742646205986	182.8006977214707	123.7395284791597	318.71454209179296	253.83706177976367	331.7541629736583	443.3005313755929	253.8911658183556	245.2085143670743	0.74234879016487	1.112825406266721	0.7454908251995694	0.5046298200474518	1.2997694754378757	1.035188612577182	1.3529471594001268	1.8078512996166896	1.035409257601404	1.0	7.9378652643249925	-7.7842926608751934	24.977129448830965	1.2894744180843916	0.7981572256210382	0.4443846042979379	0.26017648690693923	216.62175478509496	236751.96999400953	0.08292536911877778	0.0940904606729021	1.6432639929193796e-08	7.7842926608751934	-0.49131719246335337	
EGT(ph)GQQERESPRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGRR	ddPTM_K562_Methotrexat_30min_R1	1	EGTGQQERESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGRR	49	3	Q6PKG0;A0A0B4J210	Q6PKG0	LARP1	La-related protein 1	2	EGT(0.799)GQQERES(0.212)PRPLQLPGAEGPAIS(0.989)DGEEGGGEPGAGGGAAGAAGAGRR	53.266999999999996	1.1149000000000001e-05	38478000.0	364.25	105.92	439.92	229.35	228.41	119.01	236.32	195.2	105.63	247.55	True	False	348.23800614063504	123.42147966783588	347.58680386250586	209.2432415888467	258.44991855428856	142.00699817801754	289.320775680622	188.33470535958676	100.71928435570256	202.71629619145477	1.717858961924515	0.608838470249431	1.7146465794453376	1.0321974380946048	1.2749340995762686	0.7005208798995591	1.4272201155815014	0.9290555761817719	0.49684848356038697	1.0	7.663318260274553	-8.653946878555056	0.6493452140428957	0.8129369893668187	1.2801428602056661	0.1816805739057481	0.37349456498152345	1.4335598227664526	1.2374080303533075	0.3087821481904113	0.23166536452908149	2.218467758743521e-09	8.653946878555056	0.46720587083884746	
EGTGQQERES(ph)PRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGRR	ddPTM_K562_Methotrexat_30min_R1	1	EGTGQQERESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGRR	49	3	Q6PKG0;A0A0B4J210	Q6PKG0	LARP1	La-related protein 1	1	EGT(0.219)GQQERES(0.781)PRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGRR	60.97	6.3808e-07	43043000.0	251.79	306.26	582.15	226.66	241.24	223.82	164.59	226.72	244.08	232.99	True	False	240.72161308483314	356.8642594700851	459.96467055045855	206.78906971235227	272.96728843761883	267.0700473254676	201.5034972464183	218.74612909388074	232.73277407497756	190.79325328073944	1.2616882879533873	1.8704238925313743	2.410801549013117	1.0838384804313603	1.430696755487291	1.3997876902517723	1.0561353390726005	1.14650872257003	1.2198165819444724	1.0	7.575866346283181	-7.290199159444105	24.999368516247664	1.210144920678205	1.8499166724904437	0.5199676479965065	0.28872288857413353	562.0679365443415	488574.6991919542	0.08279847944497284	0.12283393490600039	5.126262491325524e-08	7.290199159444105	0.6397717518122388	
EGVQGPLNVS(ph)LSEEGK	ddPTM_K562_Methotrexat_30min_R1	1	EGVQGPLNVSLSEEGK	16	0	P12270	P12270	TPR	Nucleoprotein TPR	1	EGVQGPLNVS(0.926)LS(0.074)EEGK	117.3	0.0006485	7622300.0	1114.7	756.41	1235.1	1178.9	770.2	594.21	555.14	1158.6	1140.3	1396.3	True	False	1065.6991227040937	881.3938957283581	975.8693886401641	1075.547667360329	871.4948000110014	709.0326727784202	679.6442764528624	1117.8513812992678	1087.2877018915804	1143.416539576362	0.9320305293982691	0.7708423529144647	0.8534679662773861	0.9406437900214574	0.7621848817526217	0.620100066980943	0.5943978007390657	0.977641430404211	0.9509112945789838	1.0	10.159135348851898	-9.33551348418933	24.999521434196296	0.9732082070725078	0.7833933890655655	0.40577628483928785	0.10768339996636997	163.36985385307375	55134.748723000914	0.06520610719278898	0.03132400233724557	4.618346524025106e-10	9.33551348418933	-0.18981481800694222	
EGVQGPLNVSLS(ph)EEGK	ddPTM_K562_Methotrexat_30min_R1	1	EGVQGPLNVSLSEEGK	16	0	P12270	P12270	TPR	Nucleoprotein TPR	1	EGVQGPLNVS(0.438)LS(0.562)EEGK	110.04	0.0051218	0.0	620.66	433.41	783.24	575.01	431.32	348.04	400.14	464.96	560.8	776.73	True	False	593.3765295572999	505.02363578962184	618.8486276079037	524.599766060618	488.046140146384	415.2938042675174	489.88158082618503	448.6070932581631	534.7285304049792	636.0566703324128	0.9328988394181802	0.7939915723636526	0.9729457397003386	0.8247689090131769	0.7672997751777743	0.6529195017332003	0.7701854310719917	0.7052942201261946	0.8406932201898332	1.0	9.31301149988382	-7.533723509657002	4.729307983639518	0.7681784441757545	0.8913262754116691	0.18492401059569463	0.09707933061101773	0.25939696164240045	15.428455400979402	0.027290991886319373	0.03746100609149207	2.926014610372108e-08	7.533723509657002	0.12314783123591455	
EGYAWAEDKEHCEEYGR	ddPTM_K562_Methotrexat_30min_R1	1	EGYAWAEDKEHCEEYGR	17	1	Q9Y3I0	Q9Y3I0	RTCB	tRNA-splicing ligase RtcB homolog	0		88.10799999999999	0.025055	15389000.0	1643.3	932.2	1877.2	1605.5	1269.0	1457.8	1041.4	1692.2	1496.2	1981.9	False	True	1571.0624996318625	1086.2302053092574	1483.2013734558473	1464.7483076995577	1435.895742942042	1739.4992180817908	1274.9604595201417	1632.6843668519098	1426.6419885733415	1622.9587049963422	0.9680237055910818	0.669290106991173	0.9138873151176019	0.9025172995408154	0.8847395429850313	1.0718074420049468	0.7855778804446014	1.005992550411558	0.8790377624405156	1.0	10.664410576689118	-6.9668111863938025	24.999725142477985	0.928982365592682	0.8118897227871403	0.16497927970282766	0.10089731574540733	284.6780116572111	214433.15910001486	0.02432130028138735	0.05062843158205437	1.0794159064377373e-07	6.9668111863938025	-0.11709264280554166	
EHAPLAS(ph)PVENKEVYQCR	ddPTM_K562_Methotrexat_30min_R1	1	EHAPLASPVENKEVYQCR	18	1	Q9ULJ3	Q9ULJ3	ZBTB21	Zinc finger and BTB domain-containing protein 21	1	EHAPLAS(1)PVENKEVYQCR	62.165	0.032886	18230000.0	1073.2	678.87	1460.1	1077.4	697.86	655.37	703.43	839.43	1172.6	1185.3	True	False	1026.0234130133956	791.0417286830037	1153.6449634470919	982.9460147714132	789.6408220406096	782.0109771945832	861.1920837720888	809.9067711065467	1118.0860819416532	970.6306842081658	1.0570688004268265	0.8149770469376109	1.1885519201242107	1.0126879674871334	0.813533751701651	0.8056730432260574	0.887250009487021	0.8344129072812728	1.1519170989878407	1.0	9.92277865801122	-5.949612180082434	16.80805490393659	0.939445771758229	1.8839119483324964	0.05728060120015532	0.13387565696293408	233990290.47522578	1829205136.1717644	0.0341121924666884	7312307564.520205	1.123020851220208e-06	5.949612180082434	0.9444661765742675	
EHASIDAQSGAGVPNPST(ph)SASPK	ddPTM_K562_Methotrexat_30min_R1	1	EHASIDAQSGAGVPNPSTSASPK	23	0	Q8IXJ6-5;Q8IXJ6-2;Q8IXJ6-3;Q8IXJ6	Q8IXJ6-5	SIRT2	NAD-dependent protein deacetylase sirtuin-2	1	EHASIDAQSGAGVPNPS(0.159)T(0.5)S(0.159)AS(0.181)PK	137.85	4.6747e-13	22754000.0	1576.0	1056.2	1842.2	1493.8	872.42	892.2	1011.5	1197.1	997.43	1780.1	True	False	1506.7209270491162	1230.71909766964	1455.5473951525473	1362.8408732741195	987.1585217159147	1064.6050228924225	1238.354623396028	1154.997314477261	951.0596970075583	1457.7066404783216	1.0336242459283245	0.8442844832385482	0.9985187380877502	0.9349212217534569	0.6771997151580482	0.7303287186392253	0.8495225232627623	0.7923386519651637	0.6524355934164395	1.0	10.509484695060102	-7.67209456800752	8.000002095944179	0.7741320601850837	0.9499553080617422	0.3967556801028026	0.10187367775740037	0.24280205666856636	19.04549267885852	0.028759393496806895	0.03712283041224462	2.1276756922730175e-08	7.67209456800752	0.17582324787665848	
EHASIDAQSGAGVPNPSTSAS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	EHASIDAQSGAGVPNPSTSASPK	23	0	Q8IXJ6-5;Q8IXJ6-2;Q8IXJ6-3;Q8IXJ6	Q8IXJ6-5	SIRT2	NAD-dependent protein deacetylase sirtuin-2	1	EHASIDAQSGAGVPNPS(0.027)T(0.081)S(0.239)AS(0.653)PK	151.28	3.7978e-18	20565000.0	2204.6	1980.0	3184.1	2525.6	1531.1	1537.2	1483.9	1872.9	2104.1	3006.9	True	False	2107.6884237135055	2307.161345754485	2515.8009233010653	2304.1845692469637	1732.4664870122613	1834.242144351304	1816.702348647915	1807.029045430175	2006.2808502587682	2462.321272543266	0.8559762071732135	0.9369863191619506	1.0217192010458334	0.9357773881663431	0.7035907565477201	0.7449239726775232	0.7378006959958932	0.7338721659029258	0.8147924775821533	1.0	11.265803295089675	-7.744034656132326	23.346989140961924	0.7710768828737097	0.9435775402061383	0.4007817888913304	0.08713845288781755	95.25313215836421	127772.63603050713	0.02467261302358631	0.03175393751171569	1.8028738681396787e-08	7.744034656132326	0.1725006573324286	
EHDHLPADHR	ddPTM_K562_Methotrexat_30min_R1	1	EHDHLPADHR	10	0	O76083-12	O76083-12			0		89.04700000000001	0.022622999999999997	10614000.0	3900.9	3418.8	4197.8	4015.1	3618.9	3938.4	3839.0	4411.9	4480.1	3652.6	False	True	3729.4211068057734	3983.6985903360787	3316.739146331212	3663.102416844902	4094.8487818226617	4699.440060703338	4699.99347426332	4256.730976311273	4271.821128864745	2991.078745582338	1.2468481855631275	1.331860151197887	1.1088772407713627	1.2246760210693572	1.3690207213268901	1.5711522365113781	1.5713372579056828	1.4231423972365271	1.428187450823217	1.0	11.546450177187449	-7.874580856480999	4.122481716027109	1.4389277916235361	1.227082954632963	0.18576458754549974	0.1593819444212422	0.291395191713362	8.974997317946082	0.04884666499411533	0.05635372741127905	1.3348090531086118e-08	7.874580856480999	-0.21184483699057322	
EHIYDLR	ddPTM_K562_Methotrexat_30min_R1	2	EHIYDLR	7	0	Q14677-2;Q14677;Q14677-3	Q14677-2	CLINT1	Clathrin interactor 1	0	;	116.88	0.010126999999999999	11072000.0	8336.7	6907.8	10054.6	8997.3	7913.6	6802.9	6877.1	8015.1	8910.3	9425.3	False	True	7970.228650082728	8049.19653747618	7944.276864238844	8208.520678209417	8954.377109019815	8117.4641450738245	8419.464736091764	7733.204389998069	8496.062097837888	7718.286836975634	1.0326421935888839	1.0428734649916447	1.0292798171455055	1.0635158878632551	1.1601508596600092	1.051718382139657	1.0908463126502412	1.0019327544230372	1.1007704529891533	1.0	12.914064944839877	-7.343193537435705	5.814049178470802	1.0716177975720298	1.035849079385919	0.09435626827234311	0.0442423112385236	0.4999613547465942	27.770032730671748	0.012431663151255101	0.018649636484520813	4.53739368803666e-08	7.343193537435705	-0.035768718186110826	
EHLELFWSR	ddPTM_K562_Methotrexat_30min_R1	2	EHLELFWSR	9	0	A0A087WVQ6;Q00610-2;Q00610;J3KS13	A0A087WVQ6	CLTC	Clathrin heavy chain;Clathrin heavy chain 1	0	;	116.52	1.3737e-05	6565000.0	8232.900000000001	5952.0	7263.400000000001	7801.700000000001	6565.4	5867.6	6439.9	9182.9	9313.099999999999	9729.9	False	True	7870.991573796111	6935.466833298328	5738.911600233965	7117.737073920673	7428.86517786579	7001.430657166088	7884.211506878965	8859.93220208273	8880.13601375645	7967.720825341289	0.9878598593417667	0.870445512001389	0.720270165839821	0.8933215947128509	0.9323701646571663	0.8787243944213105	0.9895190456225922	1.1119782427496414	1.1145139505281396	1.0	12.959951383504873	-8.943938361974254	2.6116549805326303	1.0845563066966566	0.8741621996339994	0.607333453498633	0.07047998215362114	0.19079844426349063	2.6239073420649666	0.03767204396749645	0.0221406931750923	1.1377887570811184e-09	8.943938361974254	-0.21039410706265715	
EHSLQVS(ph)PSLEK	ddPTM_K562_Methotrexat_30min_R1	1	EHSLQVSPSLEK	12	0	O95235-2;O95235	O95235-2	KIF20A	Kinesin-like protein KIF20A	1	EHSLQVS(0.98)PS(0.02)LEK	89.35799999999999	0.013705000000000002	10052000.0	6541.7	4031.3	8386.3	6223.2	4709.1	4600.6	4086.2	6139.4	6410.4	8503.0	True	False	6254.1347008104085	4697.40380461619	6626.130235570405	5677.621718141315	5328.429190770981	5489.60083873446	5002.6343669014805	5923.473822154953	6112.381903188444	6963.024304245366	0.8981922836313028	0.6746211989741551	0.9516167036111656	0.8153959357401153	0.765246386907228	0.788393174986829	0.7184571169529549	0.8507041715398584	0.8778343484255421	1.0	12.7654983437619	-10.038762483311201	1.8413289677742477	0.9982078906019576	0.8016194655443467	0.3801857309162334	0.07617371757766685	0.39425726952074913	3.020642284011455	0.07022375678540153	0.01990363027533894	9.146133089155428e-11	10.038762483311201	-0.19658842505761087	
EHSPYGPS(ph)PLGWPSSETR	ddPTM_K562_Methotrexat_30min_R1	2	EHSPYGPSPLGWPSSETR	18	0	G3V599;Q96PC5-6;Q96PC5-11;Q96PC5-13;Q96PC5-10;Q96PC5-9;Q96PC5-14;Q96PC5-7;Q96PC5-12;Q96PC5	G3V599	MIA2	Melanoma inhibitory activity protein 2	1	EHSPY(0.001)GPS(0.992)PLGWPS(0.002)S(0.002)ET(0.002)R;EHSPYGPS(1)PLGWPSSETR	92.289	0.0023124	23915000.0	2540.8199999999997	1954.2800000000002	2886.7	2883.86	1723.46	1917.87	2190.54	2088.11	2398.1	2575.47	True	False	2429.1285950919664	2277.1915529197336	2280.8211190895977	2631.036471281498	1950.1251986847074	2288.4712343137103	2681.824356632657	2014.6699877479841	2286.6128544297108	2109.0274261854424	1.1517766743723599	1.0797353911316585	1.0814563579264946	1.2475117386406886	0.9246561587925205	1.0850836769120753	1.2715929263581087	0.9552602127094569	1.084202521996342	1.0	11.042362140990683														
EHVIEALR	ddPTM_K562_Methotrexat_30min_R1	2	EHVIEALR	8	0	X1WI28;P27635;H7C123;H7C2C5;F8W7C6;A0A087WV22	X1WI28	RPL10	60S ribosomal protein L10	0	;	124.08	0.004413800000000001	17626400.0	11793.8	9960.4	12931.7	11183.7	10783.3	10274.9	9682.7	12603.6	12837.6	13801.6	False	True	11275.358673497381	11606.186802147962	10217.512892136678	10203.242384814408	12201.492958917985	12260.379006632325	11854.29195448019	12160.324244211508	12240.782778043802	11301.99649976159	0.997643086664841	1.02691474045252	0.90404495279681	0.9027822991300378	1.0795873949505619	1.0847976290641173	1.0488670700552996	1.0759447894421152	1.0830637558861407	1.0	13.464290027046893	-7.776133586892806	24.998708432660287	1.0663195904707665	0.9589367786402487	0.5920034134225232	0.04228356082129717	170.15740465339732	289481.23134657624	0.013863065958073344	0.015784990070535153	1.6744277508866743e-08	7.776133586892806	-0.10738281183051779	
EHVIEALRR	ddPTM_K562_Methotrexat_30min_R1	1	EHVIEALRR	9	1	X1WI28;P27635;H7C123;H7C2C5;F8W7C6;A0A087WV22	X1WI28	RPL10	60S ribosomal protein L10	0		134.77	0.0004938	11933000.0	3783.1	2325.9	3202.3	3188.0	2662.7	1864.3	2415.0	3550.8	4104.7	4483.0	False	True	3616.799453756038	2710.2154414597762	2530.1809920187834	2908.512989689311	3012.891721616845	2224.5495899779685	2956.6252254092005	3425.9163513874023	3913.8733929267487	3671.0852588418197	0.9852126002916892	0.7382600104239514	0.6892188041464945	0.7922760667800206	0.82070873030265	0.6059651119842925	0.8053817922883049	0.9332162316677535	1.0661352480169652	1.0	11.841990905250444	-9.37984510278353	2.790536490227297	1.0276051960475419	0.7661695237246782	0.5572556802112436	0.09364935436604276	0.20643286498312916	3.0350985880891788	0.06488959578109958	0.02590094947216405	4.170180922990892e-10	9.37984510278353	-0.2614356723228637	
EHYPVSSPS(ph)S(ph)PSPPAQPGGVSR	ddPTM_K562_Methotrexat_30min_R1	1	EHYPVSSPSSPSPPAQPGGVSR	22	0	O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7	O75179-4	ANKRD17	Ankyrin repeat domain-containing protein 17	2	EHY(0.001)PVS(0.007)S(0.037)PS(0.946)S(0.966)PS(0.043)PPAQPGGVSR	69.081	0.017762	48581000.0	1176.8	825.94	1276.7	883.28	769.91	928.84	809.21	1052.8	935.62	1049.8	True	False	1125.0692810605333	962.4125464204337	1008.738117137801	805.8442137806695	871.1666599279025	1108.325184334677	990.6959414713789	1015.7724272672797	892.1232304163822	859.671047230011	1.3087206841333963	1.119512573468039	1.1734001283259528	0.9373867089943536	1.0133721063829382	1.289243354078129	1.1524128265847149	1.181582688564714	1.037749536047465	1.0	9.74764090852317	-6.06798213470609	1.982617934119534	1.1046597583901216	1.4595497654993743	0.2827351544028516	0.09942434496525134	2.2381668042269007	5.967746449843803	0.027907083955979746	1.721195142702341	8.551018879398117e-07	6.06798213470609	0.35489000710925267	
EHYPVSSPSS(ph)PS(ph)PPAQPGGVSR	ddPTM_K562_Methotrexat_30min_R1	1	EHYPVSSPSSPSPPAQPGGVSR	22	0	O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7	O75179-4	ANKRD17	Ankyrin repeat domain-containing protein 17	2	EHY(0.001)PVS(0.02)S(0.046)PS(0.616)S(0.668)PS(0.649)PPAQPGGVSR	73.21300000000001	0.010338	49422000.0	1133.5	1125.3	1658.9	1335.6	1303.4	930.2	1149.2	1080.9	1351.0	1725.9	True	False	1083.6726972145777	1311.2366981704658	1310.719560209836	1218.5100216527735	1474.8199459028046	1109.9479850868995	1406.937353639856	1042.8841343400472	1288.1923048807555	1413.322785687061	0.7667552721778063	0.9277687386417054	0.9274028364105469	0.8621597514685346	1.04351246639376	0.7853464164927608	0.9954819719091269	0.7378952245739591	0.9114636217051608	1.0	10.464875281917788														
EHYPVSSPSS(ph)PSPPAQPGGVSR	ddPTM_K562_Methotrexat_30min_R1	4	EHYPVSSPSSPSPPAQPGGVSR	22	0	O75179-4;O75179-6;O75179-2;O75179;H0YM23;O75179-7	O75179-4	ANKRD17	Ankyrin repeat domain-containing protein 17	1	EHYPVSSPS(0.052)S(0.923)PS(0.025)PPAQPGGVSR;EHYPVSS(0.005)PS(0.083)S(0.883)PS(0.029)PPAQPGGVSR;EHYPVS(0.001)S(0.001)PS(0.212)S(0.757)PS(0.03)PPAQPGGVSR;EHYPVSSPS(0.293)S(0.705)PS(0.002)PPAQPGGVSR	122.12	1.3166999999999998e-06	227861000.0	6425.02	6246.12	9786.7	7080.6	6463.86	6335.6	6008.35	6633.83	6364.48	7761.12	True	False	6142.583813901721	7278.185164113135	7732.605413168732	6459.8547913406965	7313.970888079861	7559.86503366648	7355.875433990625	6400.5144388093595	6068.596713965558	6355.5059612095465	0.9664980021091345	1.1451779305274996	1.216678178002543	1.0164186503431885	1.1508085953691567	1.1894985355702075	1.1574020194280006	1.007081808730024	0.9548565843545546	1.0	12.633791267275734	-9.365930794941093	4.825831209247436	0.9793292513849248	1.124615185016958	0.4146308752550327	0.07267396953652419	0.22228022291279992	8.119847236414225	0.042358699693989074	0.01943765716469136	4.305952206046688e-10	9.365930794941093	0.14528593363203313	
EIAQDFKTDLR	ddPTM_K562_Methotrexat_30min_R1	1	EIAQDFKTDLR	11	1	K7EMV3;A0A590UJJ6;B4DEB1;K7EK07;K7ES00;Q71DI3;Q16695;P84243;P68431	K7EMV3	H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A	Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1	0		131.09	0.0023989000000000003	47729000.0	6934.3	4634.5	9104.4	7805.1	5238.6	4683.6	4341.0	7018.9	6655.8	8641.2	False	True	6629.476474896382	5400.272351969271	7193.5108589875435	7120.83900119951	5927.567721809443	5588.639414053975	5314.579753002626	6772.041308649611	6346.373310751535	7076.19494505999	0.9368702426046827	0.76316048298518	1.016578954485907	1.0063090483637236	0.8376772782309478	0.7897803067106706	0.7510505002003687	0.9570173463603185	0.8968624182947426	1.0	12.788758078648227	-10.125167332642626	1.6209526444844031	0.9976821983181934	0.8767976700506325	0.1306550005174587	0.09147671861898075	1.2289698652471903	6.714372561162283	0.09319352999086115	0.02689165921355875	7.496053325123438e-11	10.125167332642626	-0.12088452826756091	
EIEHVMYHDWR	ddPTM_K562_Methotrexat_30min_R1	3	EIEHVMYHDWR	11	0	C9JJ19;P82930	C9JJ19	MRPS34	28S ribosomal protein S34, mitochondrial	0	;;	101.39	0.0028577	26758300.0	8601.0	6203.900000000001	7813.700000000001	8288.3	7155.5	7054.900000000001	6620.5	8625.3	9213.1	10991.5	False	True	8222.910338546611	7228.989026730428	6173.71115052842	7561.677607415907	8096.573671096754	8418.159578574041	8105.315654170443	8321.943310133423	8784.784991929595	9000.832840187333	0.9135721643260146	0.8031466815441906	0.6859044335279454	0.8401086590181056	0.8995360557021789	0.9352645169665027	0.9005072972782536	0.9245748096750811	0.9759969047205146	1.0	13.13584278375083	-7.783689712137602	2.708742363802461	0.93785355892201	0.7970334829399082	0.5532142285640196	0.057940381523738003	0.21475646667067733	3.227785346615788	0.019560998972278268	0.024258461716112196	1.645546987745567e-08	7.783689712137602	-0.1408200759821019	
EIEQEAAVELSQLRDPQHDLDR	ddPTM_K562_Methotrexat_30min_R1	2	EIEQEAAVELSQLRDPQHDLDR	22	1	P47985	P47985	UQCRFS1	Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11	0	;	101.61	0.00016583	13798500.0	4321.0	3261.5	4390.799999999999	3920.2000000000003	3675.7	3627.1	3457.62	4909.6	5141.7	5622.5	False	True	4131.054013819309	3800.407438978913	3469.2310838322646	3576.522152503147	4159.118977409035	4327.985741462799	4233.07930098524	4736.926585212228	4902.663489271191	4604.21076686106	0.8972339067430818	0.8254199539109842	0.7534909367751268	0.7767937511126269	0.9033294060611678	0.9400059989897945	0.9193930328847998	1.028824879023001	1.064821689866644	1.0	12.168738161864935	-8.578570888263107	1.0087003669472623	1.033839711360642	0.8127592224808263	0.7657615287980504	0.04760996255493497	0.2679696191425571	0.5567223284339258	0.03438703747882505	0.023076708004555253	2.63893754330944e-09	8.578570888263107	-0.22108048887981557	
EIESS(ph)PQYR	ddPTM_K562_Methotrexat_30min_R1	1	EIESSPQYR	9	0	Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;Q8WWM7-7;H3BSK9	Q8WWM7-6	ATXN2L	Ataxin-2-like protein	1	EIES(0.39)S(0.61)PQYR	110.84	0.0042526000000000005	35285000.0	4043.0	3485.1	4512.8	4242.5	3633.5	3285.1	3069.6	3853.2	3877.5	4273.8	True	False	3865.274560951508	4060.953538428763	3565.6249510609146	3870.566611906181	4111.368937730424	3919.8990817125077	3758.0359386816094	3717.680771985448	3697.2358713361427	3499.773406031266	1.1044356626890082	1.16034756176797	1.0188159453169638	1.105947775143361	1.1747528941859997	1.120043679101403	1.0737940725548893	1.0622632784107267	1.056421500021854	1.0	11.77304580198324	-9.700801734396777	0.9656423248542934	1.0048272790334243	1.1128413937536368	0.4362502622934903	0.04027298736208691	0.5206448988606989	0.9971861961157246	0.03980905670591759	0.014199970770916523	1.9915823354661576e-10	9.700801734396777	0.1080141147202125	
EIFDSR	ddPTM_K562_Methotrexat_30min_R1	4	EIFDSR	6	0	P06733;A0A2R8Y6G6;K7EM90;K7ERS8;A0A2R8YEM5;A0A2R8Y879;A0A2R8YEG5;A0A2R8Y798	P06733	ENO1	Alpha-enolase;Enolase	0	;;;	138.48	8.818199999999999e-08	161212000.0	30096.6	25763.5	32789.1	33246.2	28584.399999999998	25577.4	26705.300000000003	32153.0	31432.600000000002	34825.7	False	True	28773.589500651306	30020.480470376617	25907.115999563764	30331.557264055453	32343.74962533688	30519.87055876337	32694.64332592976	31022.160765506105	29971.30528674671	28518.428262067246	1.0089472405785929	1.0526695298389663	0.9084342152902998	1.063577451931314	1.134135069721137	1.0701806662802056	1.1464391734875992	1.087793495505119	1.0509451997609545	1.0	14.799606852179584	-7.505768777859175	24.780699942916506	1.0895730345082304	0.9945695017194857	0.38666367081498487	0.05110364154149196	614.721893007062	890314.0244435697	0.013968601541005791	0.020171545084624844	3.1205505500184376e-08	7.505768777859175	-0.09500353278874474	
EIIDLVLDR	ddPTM_K562_Methotrexat_30min_R1	4	EIIDLVLDR	9	0	P68363;Q71U36;Q9BQE3;Q71U36-2;F5H5D3;F8VVB9;F8VQQ4;F8VRZ4;F8VS66;A0A1W2PQM2	P68363	TUBA1B;TUBA1A;TUBA1C	Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain	0	;;;	149.72	1.2024e-06	183238000.0	18244.699999999997	14310.399999999998	17228.6	17042.2	15169.3	13678.9	14752.9	21047.799999999996	20484.8	22090.200000000004	False	True	17442.684833586944	16674.950364790384	13612.552302749513	15548.136785722443	17164.328836415065	16322.153830579662	18061.61336974716	20307.536943993393	19532.466119186734	18089.450721585443	0.9642462395374594	0.9218052345222848	0.752513302491058	0.8595140352807646	0.9488584866722092	0.9023023463671601	0.998461127854752	1.122617665762576	1.0797711008372077	1.0	14.142860981357376	-8.878683870636733	2.4172736330625524	1.0763082990374802	0.8846223638520841	0.6219235409571593	0.06200774411951543	0.19419221360897224	2.298078513666253	0.033124529284046675	0.02012353796684585	1.3222577749158551e-09	8.878683870636733	-0.191685935185396	
EIIEFPILK	ddPTM_K562_Methotrexat_30min_R1	1	EIIEFPILK	9	0	H0Y4B0	H0Y4B0	ERI3		0		93.162	0.0069542	8866200.0	3976.5	3654.6	4620.2	5498.1	3309.4	3714.1	3740.4	4029.5	4361.8	5326.7	False	True	3801.697821326659	4258.460532421382	3650.483158768751	5016.090109350937	3744.644106928602	4431.797260171205	4579.279914335642	3887.7802010576565	4159.0208700435805	4361.983013221661	0.8715526424113265	0.9762671059271686	0.8368861473563115	1.1499563602486769	0.8584728770328001	1.0160051625001587	1.0498160814600446	0.8912873317647863	0.9534702123866875	1.0	12.090768436394857														
EIIVPQLGCHSESTVS(ph)ACES(ph)T(ph)AS(ph)KSK	ddPTM_K562_Methotrexat_30min_R1	1	EIIVPQLGCHSESTVSACESTASKSK	26	1	Q9NWW7	Q9NWW7	C2orf42	Uncharacterized protein C2orf42	4	EIIVPQLGCHS(0.044)ES(0.076)T(0.211)VS(0.827)ACES(0.889)T(0.889)AS(0.875)KS(0.187)K	43.233000000000004	0.030466000000000003	0.0	117.06	180.49	168.14	181.07	73.126	0.0	0.0	191.64	136.07	106.01	True	False	111.91418256368628	210.31290469455908	132.84971176905285	165.19587422931102	82.74335074734421	0.0	0.0	184.8999125774139	129.74413539979597	86.81056174209705	1.2891770346581657	2.4226649439197447	1.530340422905362	1.9029467257692283	0.9531484313298652	0.0	0.0	2.1299241574628627	1.494566246273685	1.0	6.439798672649135	-7.778456663150888	8.888579504822783	0.8919777941959942	1.813803230161467	0.2923356555770511	0.6508704406862688	0.26651964952327295	117.51591991039616	0.2185624434972778	0.25473224916659404	1.6654950138824058e-08	7.778456663150888	0.9218254359654728	
EIKDILIQYDR	ddPTM_K562_Methotrexat_30min_R1	1	EIKDILIQYDR	11	1	M0R210;P62249	M0R210	RPS16	40S ribosomal protein S16	0		96.604	0.030551	14236000.0	5095.1	2873.4	4992.1	5444.4	3389.0	3041.7	3102.2	5131.8	5313.6	7189.5	False	True	4871.12550470048	3348.180510550977	3944.3264310829586	4967.097904976311	3834.7129021517576	3629.4654764984116	3797.947318535993	4951.31168526807	5066.571895791548	5887.411882320603	0.8273797726515543	0.5687015920535946	0.6699593148778049	0.8436810612643025	0.6513410270592881	0.6164789467843057	0.6450962484790483	0.8409997099296616	0.8605771087642148	1.0	12.523417846539875	-9.715601857486943	1.6180840371295078	0.9822412582164017	0.6862135533732306	0.5742823525666199	0.08645054901411049	0.2588982221021533	1.3015306143737435	0.0812592120845262	0.02475624518616144	1.9248555451159022e-10	9.715601857486943	-0.2960277048431711	
EIKDSTS(ph)QHDDDNISTTSGFSSR	ddPTM_K562_Methotrexat_30min_R1	2	EIKDSTSQHDDDNISTTSGFSSR	23	1	P49790-2;P49790;P49790-3	P49790-2	NUP153	Nuclear pore complex protein Nup153	1	EIKDS(0.068)T(0.068)S(0.864)QHDDDNISTTSGFSSR;EIKDS(0.215)T(0.137)S(0.649)QHDDDNISTTSGFSSR	98.76	1.2099e-05	29949000.0	2027.5099999999998	1207.83	3553.5	2138.58	1786.1	1237.66	1475.48	1987.02	1983.13	2492.6	True	False	1938.3830880719245	1407.403377900322	2807.6689114507503	1951.0940117596508	2021.0034566341863	1476.8202786741049	1806.3939493112916	1917.1353803463417	1890.9347191548268	2041.1659862121614	0.9496450073955164	0.6895095192684809	1.375522093948374	0.955872293061448	0.9901220529275078	0.7235179738687857	0.8849814084269836	0.9392354141193651	0.9263992893904125	1.0	10.995177790770207	-8.052460218007912	24.99833674412117	0.8866810309100461	0.9951675129133923	0.07550718902401155	0.16897295438290116	913.1225655440896	435118.36154855415	0.05651931354769595	0.05651979909758408	8.862163986238424e-09	8.052460218007912	0.10848648200334621	
EILSEVER	ddPTM_K562_Methotrexat_30min_R1	1	EILSEVER	8	0	B4DUR8;P49368-2;P49368	B4DUR8	CCT3	T-complex protein 1 subunit gamma	0		136.27	5.4038e-05	11891000.0	1021.7	1183.6	1233.9	1297.5	1329.0	1019.7	878.19	1388.1	1260.6	1414.6	False	True	976.7872913490368	1379.1697822399037	974.9212522411945	1183.7501894987079	1503.7867946177885	1216.7425934133644	1075.1464624025289	1339.2797362174294	1201.9949811492822	1158.4022322457358	0.8432194484426956	1.1905793547774652	0.8416085752452013	1.0218818270091135	1.2981559882722886	1.0503627837927478	0.9281287902201265	1.1561439532286082	1.037631789451092	1.0	10.177920572277637	-6.235026282836401	23.52524735252394	1.058430027524012	0.8432188071746788	0.2130855506489967	0.12398283859606936	6370.4540859654935	5673754.206550188	0.03100126886825402	2.178005595440285	5.820679908422731e-07	6.235026282836401	-0.21521122034933315	
EIPS(ph)ATQSPISK	ddPTM_K562_Methotrexat_30min_R1	1	EIPSATQSPISK	12	0	Q9BQG0-2;Q9BQG0;I3L1L3	Q9BQG0-2	MYBBP1A	Myb-binding protein 1A	1	EIPS(0.754)AT(0.003)QS(0.242)PIS(0.001)K	177.36	0.0020846	157090000.0	5783.8	4459.9	8376.8	6478.4	4928.7	3580.4	4053.6	5006.1	5128.1	6328.5	True	False	5529.551077326575	5196.822669661833	6618.624155745225	5910.4487303648775	5576.910439904207	4272.261627397479	4962.722987047097	4830.032625515506	4889.695750302738	5182.347325581182	1.0669973913233335	1.002793202225022	1.2771479292934056	1.1404964505542943	1.0761359842431588	0.8243873594324093	0.9576206833050398	0.9320163860251945	0.9435291467567499	1.0	12.339389994140262	-8.083474298245191	5.971359052289803	0.9294679288276242	1.1227593752439928	0.587326401533492	0.07665823042451765	0.16912670610804123	9.620166280051537	0.026258464638858194	0.026444667991443026	8.25136315995059e-09	8.083474298245191	0.19329144641636864	
EIPSATQS(ph)PISK	ddPTM_K562_Methotrexat_30min_R1	3	EIPSATQSPISK	12	0	Q9BQG0-2;Q9BQG0;I3L1L3	Q9BQG0-2	MYBBP1A	Myb-binding protein 1A	1	EIPSATQS(0.981)PIS(0.019)K;EIPSAT(0.018)QS(0.592)PIS(0.39)K;EIPSAT(0.008)QS(0.801)PIS(0.191)K	216.0	1.4669999999999999e-24	1134193000.0	43467.1	33187.0	62250.3	47104.1	33463.3	31221.0	30631.4	37370.8	39125.4	52207.1	True	False	41556.33833003595	38670.587667451546	49184.81273068318	42974.55668683321	37864.31049235025	37254.01638615145	37501.271192380715	36056.447782028925	37306.468693842704	42751.888292857606	0.9720351542221495	0.9045351962596724	1.150471118228953	1.0052083873453797	0.8856757444951523	0.8714004895165143	0.8771839722140626	0.8433884261447403	0.8726273898894743	1.0	15.383700522836353	-7.758938627672795	6.560547893412306	0.8818018222254733	1.0113710285760282	0.39937469411567406	0.06926586969922306	0.13766551764700405	26.646609248581306	0.021247105806348206	0.025894261875617632	1.7420530342326334e-08	7.758938627672795	0.1295692063505549	
EIPSATQS(ph)PISKK	ddPTM_K562_Methotrexat_30min_R1	1	EIPSATQSPISKK	13	1	Q9BQG0-2;Q9BQG0;I3L1L3	Q9BQG0-2	MYBBP1A	Myb-binding protein 1A	1	EIPSAT(0.002)QS(0.835)PIS(0.162)KK	84.859	0.018484	26883000.0	3473.7	2524.1	6257.3	4199.8	2300.5	2247.4	2221.0	3134.0	3157.0	5158.2	True	False	3321.0003072909362	2941.1646226358066	4943.97824106396	3831.610054610152	2603.0560730009197	2681.6782430491266	2719.1157870119405	3023.7754436318896	3010.2317590736825	4223.999996020046	0.786221664398689	0.6962984435149249	1.170449395294104	0.9071046539347507	0.6162538057418517	0.6348670088958022	0.643730063819592	0.7158559295646221	0.7126495648461163	1.0	12.044394117999111														
EIQNGNLHES(ph)DSESVPR	ddPTM_K562_Methotrexat_30min_R1	5	EIQNGNLHESDSESVPR	17	0	Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2	Q86UP2-2	KTN1	Kinectin	1	EIQNGNLHES(0.996)DS(0.003)ESVPR;EIQNGNLHES(1)DSESVPR;EIQNGNLHES(0.935)DS(0.032)ES(0.032)VPR;EIQNGNLHES(0.926)DS(0.069)ES(0.006)VPR;EIQNGNLHES(1)DSESVPR	340.48	0.0	465613000.0	12242.32	11556.52	13449.1	11872.34	10907.68	10090.289999999999	10417.64	11618.800000000001	12388.980000000001	12387.060000000001	True	False	11704.162271340063	13466.038502746778	10626.317702826038	10831.510385196978	12342.231109041804	12040.095736876478	12754.060957860009	11210.160218401468	11813.01902392419	10143.643400934443	1.1538420475488977	1.3275346904945686	1.0475839185994187	1.067812614962309	1.2167453666504902	1.1869596811503973	1.257345162260445	1.1051413949911504	1.1645735715468823	1.0	13.308288313188863	-10.556327181198771	1.1819398714089746	1.00008926724243	1.1744111741347945	0.2885398303497918	0.08036118286497602	3.4306188604592562	6.0122170015541325	0.07999911179583553	0.024244034747350672	2.777619924503061e-11	10.556327181198771	0.1743219068923645	
EIRAQYESLAAKNLQS(ph)AEEWY(ph)KS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	EIRAQYESLAAKNLQSAEEWYKSK	24	3	Q16352	Q16352	INA	Alpha-internexin	3	EIRAQY(0.102)ES(0.415)LAAKNLQS(0.49)AEEWY(0.997)KS(0.997)K	40.012	0.034168000000000004	24671000.0	1240.2	1653.2	1025.0	1550.3	1485.5	1685.9	1525.9	1615.3	1545.1	1215.8	True	False	1185.6822929735504	1926.3632004047054	809.866507453784	1414.3876059960285	1680.8692877386954	2011.676314833375	1868.121917785465	1558.4889834392436	1473.2686382466723	995.6068386571227	1.1909141710725912	1.934863367353914	0.8134400809722584	1.4206286568940794	1.6882862014144626	2.020552929856056	1.8763650923744086	1.5653658883473902	1.4797695044299024	1.0	9.959432329759034	-6.0203242412346025	16.19493818633093	1.5561282587612266	1.019787621044864	0.06877981401812183	0.36936275087185183	1875745.9126513614	83535305.1685641	0.09414837706750794	12640356.804806877	9.542798613005925e-07	6.0203242412346025	-0.5363406377163626	
EIS(ph)PGSGPGEIR	ddPTM_K562_Methotrexat_30min_R1	1	EISPGSGPGEIR	12	0	E9PMG5;Q6R5J7;E9PMV8;H0Y5B0;E9PK52;E9PHY5;O43491-4;O43491	E9PMG5	EPB41L2	Band 4.1-like protein 2	1	EIS(0.5)PGS(0.5)GPGEIR	113.99	0.0013052	32895000.0	1649.5	1339.2	1807.5	1430.8	1251.4	1128.9	1090.5	1402.2	1598.3	1585.1	True	False	1576.9899550555324	1560.4800374921242	1428.1304509489898	1305.3639854603093	1415.9810344504897	1347.0439479301233	1335.07238439285	1352.8838312254743	1523.995381858557	1298.0230300669568	1.21491677614856	1.2021974967667783	1.1002350635298987	1.005655489327469	1.0908751244401635	1.0377658305959623	1.0285429098465086	1.04226489044319	1.1740896321230476	1.0	10.342100265124438	-6.837596148085787	3.31027891665633	1.055432000632461	1.2129903286836534	0.624763967117351	0.04719769264535953	0.14423411608154604	3.1161936774917884	0.012371974308975136	0.03140989618213827	1.4534625691442772e-07	6.837596148085787	0.15755832805119252	
EIS(ph)SS(ph)PTSK	ddPTM_K562_Methotrexat_30min_R1	1	EISSSPTSK	9	0	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	EIS(0.746)S(0.291)S(0.962)PTSK	104.43	0.012032	30966000.0	11253.0	8259.2	16534.0	11145.0	8529.5	7635.4	6950.1	10907.0	10166.0	12713.0	True	False	10758.331593961744	9623.89241760376	13063.739350478883	10167.935153728786	9651.278754471356	9110.832987887026	8508.836844354657	10523.394627853544	9693.384878917654	10410.552508511273	1.0334064003967263	0.9244362784526211	1.2548555266205579	0.9766950548893412	0.927066910865762	0.875153646306318	0.8173280752772876	1.010839205628137	0.931111472805378	1.0	13.3457590168839	-7.5139118599533115	24.140353369553846	0.9223445495280433	1.0661734498811437	0.3295139208191762	0.09164076897997797	314.21940446868547	845931.9762451822	0.02678870417841347	0.036556808105454155	3.0625849221031104e-08	7.5139118599533115	0.14382890035310036	
EISPGS(ph)GPGEIR	ddPTM_K562_Methotrexat_30min_R1	2	EISPGSGPGEIR	12	0	E9PMG5;Q6R5J7;E9PMV8;H0Y5B0;E9PK52;E9PHY5;O43491-4;O43491	E9PMG5	EPB41L2	Band 4.1-like protein 2	1	EIS(0.228)PGS(0.772)GPGEIR;EIS(0.259)PGS(0.741)GPGEIR	125.84	0.00055449	46301000.0	3630.2	3338.7	3776.2	3287.1	3161.7	3270.1000000000004	3031.1	3681.0	3666.5	3588.5	True	False	3470.620754678745	3890.3634268032824	2983.6272248263185	2998.9250465519854	3577.518968053469	3902.000544004161	3710.901333638851	3551.537143589339	3496.045215281486	2938.5878767240397	1.1810505250391965	1.323888748612238	1.0153268678670548	1.0205327090286678	1.217427934141522	1.3278488538359252	1.262817887132847	1.2085863321360393	1.1897024563985148	1.0	11.520907326571637	-4.54650479597838	18.405433442865032	1.18383267431473	1.1770480050805845	0.0	0.11714697824733514	0.0	0.0	0.027968297524484247	0.0	2.8411568094939447e-05	4.54650479597838	-0.006784669234145557	
EISS(ph)SPTSK	ddPTM_K562_Methotrexat_30min_R1	1	EISSSPTSK	9	0	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	EIS(0.001)S(0.855)S(0.144)PTSK	157.78	1.1229000000000001e-10	31286000.0	4581.5	3871.0	7432.1	5585.0	4275.2	3571.9	3685.8	5016.8	5040.0	5944.5	True	False	4380.102745733204	4510.616954250309	5872.203775655869	5095.3717212718975	4837.463735402537	4262.119122696085	4512.4344744568225	4840.356300450692	4805.691500073284	4867.893446617264	0.8997942937261642	0.9266055232545756	1.2063131290880058	1.0467303315385241	0.993748895379813	0.8755571931546413	0.9269788921925863	0.9943431082729004	0.9872219991612173	1.0	12.249081873888896	-8.00476866753713	23.380314169328813	0.9523850975360815	1.025733009964945	0.10943613821470444	0.08397984957571322	196.14900344074377	961716.2630737978	0.02849544129548309	0.03141296173173924	9.89079800263942e-09	8.00476866753713	0.07334791242886363	
EKADREVQAEQPSSS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	4	EKADREVQAEQPSSSSPR	18	2	A0A1W2PP04;Q9Y388	A0A1W2PP04	RBMX2	RNA-binding motif protein, X-linked 2	1	EKADREVQAEQPS(0.002)S(0.008)S(0.495)S(0.495)PR;EKADREVQAEQPS(0.026)S(0.135)S(0.752)S(0.088)PR;EKADREVQAEQPS(0.001)S(0.006)S(0.496)S(0.496)PR;EKADREVQAEQPS(0.005)S(0.036)S(0.794)S(0.165)PR	123.61	0.00028839999999999996	90400500.0	10585.2	7398.41	15232.7	14334.999999999998	8281.4	7507.200000000001	7807.8	9488.900000000001	9721.099999999999	14561.4	True	False	10119.887282360609	8620.871501032041	12035.564437162195	13078.272806523295	9370.54925579214	8957.860152273028	9558.897902670791	9155.170008640285	9269.168182809995	11924.189357149062	0.8486855566658126	0.7229733814872253	1.0093402642877656	1.0967850656180926	0.7858437144135165	0.7512343090142566	0.8016392239645056	0.7677813337601326	0.7773415789688657	1.0	13.541603570293987														
EKELS(ph)PPPGLPSK	ddPTM_K562_Methotrexat_30min_R1	1	EKELSPPPGLPSK	13	1	A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YI78;H0YHT2;Q7Z4S6-3;H0YIM6	A0A1B0GV47	KIF21A	Kinesin-like protein KIF21A	1	EKELS(1)PPPGLPSK	81.60600000000001	0.024421	22311000.0	5477.2	3295.4	10873.0	6798.0	3702.8	3187.5	3038.3	4596.0	4567.6	7582.8	True	False	5236.428846214099	3839.908837777439	8590.90588833658	6202.029894575885	4189.783102415912	3803.4392630235347	3719.716116919577	4434.356074962401	4355.253272963237	6209.481441165681	0.8432956754648236	0.6183944463253905	1.3835142225215902	0.9987999728060388	0.6747396126574752	0.6125212385383232	0.5990381245460796	0.7141266331138204	0.7013875980190776	1.0	12.60025707750463	-7.763373172665437	24.9572832876474	0.691556250819617	0.9667087130804217	0.2476001204140904	0.20546115864931241	67.31933340048168	868818.1299693333	0.06423946555994182	0.07657399690176869	1.7243555823253145e-08	7.763373172665437	0.2751524622608047	
EKEVDGLLTSEPMGS(ph)PVSSK	ddPTM_K562_Methotrexat_30min_R1	4	EKEVDGLLTSEPMGSPVSSK	20	1	Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6	Q8WWM7-6	ATXN2L	Ataxin-2-like protein	1	EKEVDGLLTSEPMGS(0.93)PVS(0.058)S(0.012)K;EKEVDGLLTSEPMGS(0.943)PVS(0.042)S(0.015)K;EKEVDGLLTSEPMGS(0.946)PVS(0.022)S(0.032)K;EKEVDGLLTSEPMGS(0.916)PVS(0.066)S(0.018)K	134.52	5.0186000000000004e-08	139186000.0	18040.7	11407.6	29709.5	17272.0	10921.7	9587.800000000001	8866.2	14046.099999999999	14884.7	23255.9	True	False	17247.652429324247	13292.512003953963	23473.881954339693	15757.790576509959	12358.094984783376	11440.506656005353	10854.671044937086	13552.090701594738	14192.713545861274	19044.03115572148	0.9056723488998526	0.6979883563129141	1.2326109825380815	0.8274398654181878	0.6489222204969235	0.6007397573789535	0.5699775933036094	0.7116188054293969	0.745257841147634	1.0	14.217051273783607	-7.546334507947079	6.909774841091884	0.6892737548140053	0.9384604088445971	0.28220706671445694	0.16414528465547043	0.19379008865531291	35.66036785654547	0.04767521197579559	0.06281603565916834	2.8422710531347185e-08	7.546334507947079	0.24918665403059181	
EKLQEEGGGS(ph)DEEETGSPSEDGMQSAR	ddPTM_K562_Methotrexat_30min_R1	2	EKLQEEGGGSDEEETGSPSEDGMQSAR	27	1	Q13610-2;Q13610	Q13610-2	PWP1	Periodic tryptophan protein 1 homolog	1	EKLQEEGGGS(0.749)DEEET(0.2)GS(0.038)PS(0.013)EDGMQSAR;EKLQEEGGGS(0.521)DEEET(0.377)GS(0.074)PS(0.026)EDGMQS(0.002)AR	63.423	0.0014302999999999998	217521000.0	5317.8	3789.3	7423.5	5762.8	3789.4	3474.8	3554.6800000000003	4353.1	4741.6	6524.2	True	False	5084.035879353932	4415.417417912861	5865.408798129915	5257.584271324206	4287.772520334574	4146.255921930725	4351.907476711213	4199.999005639434	4521.164050941958	5342.6041592094125	0.9516025757944712	0.8264541572487087	1.0978557690858135	0.9840864332539682	0.802562269739458	0.776073951648381	0.8145667069886756	0.7861332938918201	0.8462472450159942	1.0	12.383327414549521	-7.761287375246842	24.999999636927324	0.8226762067889983	0.9645933541637624	0.33895215288342306	0.08565446411117897	4.273794401912136	702797.4508394401	0.025662093862304117	0.031061867003732938	1.732657108809737e-08	7.761287375246842	0.14191714737476402	
EKLQEEGGGSDEEET(ph)GS(ph)PSEDGMQSAR	ddPTM_K562_Methotrexat_30min_R1	1	EKLQEEGGGSDEEETGSPSEDGMQSAR	27	1	Q13610-2;Q13610	Q13610-2	PWP1	Periodic tryptophan protein 1 homolog	2	EKLQEEGGGS(0.204)DEEET(0.818)GS(0.898)PS(0.074)EDGMQS(0.006)AR	60.51	0.0018852	13314000.0	1259.8	911.45	1604.3	1514.1	913.03	767.67	881.31	1147.6	1062.6	1542.2	True	False	1204.4207004419266	1062.0516204989517	1267.5793540566888	1381.3612037919024	1033.109448525116	916.0113628377337	1078.9662018241743	1107.2382575341278	1013.1999579321173	1262.8926357764558	0.9536999950129733	0.8409674666017651	1.0037110979567565	1.0938073155701074	0.8180501012185698	0.7253279787117839	0.8543609894128497	0.8767477346586726	0.8022851105701304	1.0	10.302516278960313	-7.805049759628834	24.99993470805154	0.834337491887232	0.9658029476743626	0.329996290008845	0.08739103446383731	158.27250637251618	90729.83538282562	0.02770824992698689	0.031418398297707664	1.5665715686663294e-08	7.805049759628834	0.13146545578713054	
EKLQEEGGGSDEEET(ph)GSPSEDGMQSAR	ddPTM_K562_Methotrexat_30min_R1	2	EKLQEEGGGSDEEETGSPSEDGMQSAR	27	1	Q13610-2;Q13610	Q13610-2	PWP1	Periodic tryptophan protein 1 homolog	1	EKLQEEGGGS(0.346)DEEET(0.374)GS(0.205)PS(0.067)EDGMQS(0.009)AR;EKLQEEGGGS(0.415)DEEET(0.474)GS(0.084)PS(0.027)EDGMQS(0.001)AR	61.976000000000006	0.0017198	73498000.0	3916.0	3321.13	6055.6	4692.9	3095.16	2959.5	2692.31	3949.1000000000004	3930.8	5139.8	True	False	3743.8573288860034	3869.8902829422195	4784.612314670372	4281.480743197291	3502.2277917450674	3531.3814898566757	3296.1290520171615	3810.207914628813	3748.0579659698546	4208.932414319692	0.8895028383322566	0.9194470003310155	1.1367757530133042	1.0172367531088822	0.8320940910882143	0.8390207164748376	0.783127103871524	0.9052670700212879	0.890500867445188	1.0	12.039238628195019	-7.75864221875719	24.999556218545028	0.863872215842296	0.9960792872049018	0.3197406937299532	0.08159338675004893	82.73374285807253	739424.1955490257	0.02551295979089282	0.03147852603800477	1.7432424030181742e-08	7.75864221875719	0.1322070713626058	
EKLQSFDS(ph)PER	ddPTM_K562_Methotrexat_30min_R1	2	EKLQSFDSPER	11	1	P78332;E9PGM9;P78332-2	P78332	RBM6	RNA-binding protein 6	1	EKLQS(0.004)FDS(0.996)PER;EKLQSFDS(1)PER	153.32	7.7259e-08	133559000.0	4754.71	3705.21	6946.099999999999	5115.599999999999	3583.44	3558.8599999999997	3412.63	5276.5199999999995	4820.8	5806.37	True	False	4545.698641529003	4317.432974698472	5488.208534072904	4667.12329048138	4054.7251702822937	4246.559327248293	4177.99914823528	5090.941800839992	4596.682060228824	4754.780128124329	0.956027096740264	0.9080194789998876	1.154250751072668	0.9815644813680315	0.8527681745573809	0.8931137114269635	0.8786945001983554	1.070699730304516	0.9667496574740941	1.0	12.215162913781835	-9.26858107516635	24.91548398654883	1.0140435112808626	0.9485781222146441	0.11871400628024298	0.0823852230236385	1397.4576393592693	4875325.066088617	0.04749796231402618	0.02362272873683276	5.387892534758545e-10	9.26858107516635	-0.06546538906621846	
EKLREVIEIEDASPTKCPIT(ph)T(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	EKLREVIEIEDASPTKCPITTK	22	3	P46100-4;P46100;P46100-2;P46100-5;P46100-3	P46100-4	ATRX	Transcriptional regulator ATRX	2	EKLREVIEIEDAS(0.008)PT(0.032)KCPIT(0.981)T(0.98)K	49.287	0.024307	0.0	0.0	0.0	110.87	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	87.59990212819612	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
EKMS(ph)T(ph)DSPPT(ph)HGQDIHVTR	ddPTM_K562_Methotrexat_30min_R1	1	EKMSTDSPPTHGQDIHVTR	19	1	Q7Z5L4	Q7Z5L4	SPATA19	Spermatogenesis-associated protein 19, mitochondrial	3	EKMS(1)T(1)DS(0.052)PPT(0.741)HGQDIHVT(0.207)R	54.728	0.02868	2434900.0	558.32	793.23	756.29	632.91	540.31	521.29	540.01	666.03	452.37	752.59	True	False	533.776921313492	924.2977748953693	597.5550643143628	577.423762956167	611.3702355153783	622.0219147989142	661.1209888087878	642.6053473906024	431.33941743812534	616.2886582537952	0.8661151136967317	1.4997806020222624	0.9696025657968255	0.9369371888041088	0.9920192872730242	1.0093028753139213	1.0727456686969081	1.0427018877994176	0.6998983538984657	1.0	9.267462430773236	-6.903079471402036	21.443622002607977	0.9721345943179737	1.1959170711772569	0.20320420312462306	0.1715018158902485	7.074634840527748	1555.6091736408432	0.04188443996056843	0.08718982815295398	1.2500302666671304e-07	6.903079471402036	0.2237824768592832	
EKMVS(ph)NTKSVDT(ph)KAS(ph)S(ph)SK	ddPTM_K562_Methotrexat_30min_R1	1	EKMVSNTKSVDTKASSSK	18	3	Q9HCM1	Q9HCM1	KIAA1551	Uncharacterized protein KIAA1551	4	EKMVS(0.576)NT(0.363)KS(0.06)VDT(0.733)KAS(0.945)S(0.945)S(0.376)K	64.04	0.015744	71164000.0	992.28	1062.8	1068.7	1145.9	1246.5	1160.1	1244.9	1379.4	1205.5	1191.7	True	False	948.6605593225241	1238.409635488822	844.3944746496181	1045.440726124523	1410.4365985636375	1384.272906363483	1524.1005147461346	1330.8857201486376	1149.4565681226875	975.8715821908979	0.9721161847880813	1.2690293047662156	0.8652721219260174	1.0712892405140415	1.4453096332584168	1.4184990439579113	1.5617838889461517	1.3637918599501677	1.1778768734530414	1.0	9.930547501573356	-7.726378518060072	9.206351213148134	1.3622317220992421	1.046967848342666	0.37959148440455615	0.174236256557953	0.30173050587136474	74.12020473274602	0.05061651983205814	0.06489279377668303	1.8776795741547465e-08	7.726378518060072	-0.31526387375657605	
EKPDS(ph)DDDLDIASLVTAK	ddPTM_K562_Methotrexat_30min_R1	1	EKPDSDDDLDIASLVTAK	18	1	Q86V48-2;Q86V48-3;Q86V48	Q86V48-2	LUZP1	Leucine zipper protein 1	1	EKPDS(0.918)DDDLDIAS(0.082)LVTAK	71.65100000000001	0.016537	5134500.0	1635.0	1246.9	2819.8	1983.2	1206.6	1039.3	1191.1	1298.3	1603.9	2277.6	True	False	1563.127357693722	1452.9290313238726	2227.962514847004	1809.335935116637	1365.2890491992662	1240.1300160189362	1458.2344952318415	1252.6380531165546	1529.3350390808605	1865.104569604756	0.8380910020637461	0.779006740427305	1.1945509925586333	0.9700989234614672	0.7320174275743647	0.6649117889844314	0.781851333698069	0.6716181352673473	0.8199728122509237	1.0	10.865040804054658	-7.760422503621328	24.998330475909043	0.7564747731331418	0.951342933931034	0.25979382630031755	0.13497808211613077	33.47383109464354	822887.7899640813	0.04122089902427782	0.05020851325730371	1.736111030368265e-08	7.760422503621328	0.19486816079789215	
EKPELSEPSHLNGPSS(ph)DPEAAFLSR	ddPTM_K562_Methotrexat_30min_R1	2	EKPELSEPSHLNGPSSDPEAAFLSR	25	1	F5GWT4;Q9H4A3-4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7	F5GWT4	WNK1	Serine/threonine-protein kinase WNK1	1	EKPELSEPSHLNGPS(0.018)S(0.982)DPEAAFLSR;EKPELSEPSHLNGPS(0.125)S(0.874)DPEAAFLS(0.001)R	124.57	4.3987e-10	103149000.0	7053.5	5238.5	11021.0	8068.2	5637.7	5243.700000000001	4676.1	7003.5	6936.5	9862.5	True	False	6743.436585622427	6104.073085724681	8707.842710876243	7360.8734326886115	6379.156367205951	6256.970812083614	5724.834458192948	6757.182935378409	6614.023629019507	8076.305680421019	0.8349654969066117	0.7558001550786367	1.078196276298237	0.9114159027602442	0.7898606887392361	0.7747317968971968	0.7088432118253493	0.8366675560286811	0.8189417155239123	1.0	12.979479800987939	-7.760572566564963	24.997043951546544	0.8053688674274835	0.8982235768354012	0.09673652263336996	0.10314634036479202	45.944254082206825	1324908.699463609	0.03157539752983902	0.03843055945288715	1.7355112508692894e-08	7.760572566564963	0.09285470940791773	
EKPYFPIPEEYTFIQNVPLEDR	ddPTM_K562_Methotrexat_30min_R1	2	EKPYFPIPEEYTFIQNVPLEDR	22	1	A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;A0A1X7SBS1;Q5RI18;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7	A0A1W2PPS1	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	0	;	101.89	0.00015978	9350500.0	3427.0	1955.34	2738.7	2976.5	2281.05	1708.26	1945.9099999999999	4245.6	4210.7	6072.8	False	True	3276.3531833739357	2278.426699902815	2163.8842965499293	2715.5548663143777	2581.0480570827	2038.3570683772814	2382.329851915535	4096.279841571011	4014.9454760632098	4972.957073364845	0.6588339965615391	0.45816335558295224	0.43513029865865765	0.5460644092141651	0.5190167578374628	0.4098883296810907	0.47905699099541643	0.8237110799750682	0.807355747663147	1.0	12.279888262492697	-9.318828609333142	3.9912371168286236	0.877340244436837	0.494720006931523	0.8250347697252864	0.07960219144008072	0.09305916372065402	3.0377998951241523	0.04667155665617211	0.021390324416506054	4.799228087720704e-10	9.318828609333142	-0.382620237505314	
EKQLS(ph)PEAQAR	ddPTM_K562_Methotrexat_30min_R1	1	EKQLSPEAQAR	11	1	A0A0U1RRH6;O94880;B4DG57;O94880-2	A0A0U1RRH6	PHF14	PHD finger protein 14	1	EKQLS(1)PEAQAR	92.906	0.032731	9530900.0	2990.2	2560.6	4092.8	3274.9	2608.6	2225.5	1807.4	2845.4	2796.4	3963.7	True	False	2858.754388364385	2983.6956272418843	3233.7772114213153	2987.7946016102646	2951.6766233558806	2655.546377994942	2212.7554585526254	2745.3256692119276	2666.3959743660585	3245.835520961704	0.8807453026816863	0.9192380846081348	0.9962849905786921	0.9205009256676738	0.9093734430761706	0.8181395393714016	0.6817213762874255	0.8457993793839926	0.8214821598772928	1.0	11.664374179463234	-8.20297189721342	3.933477534555509	0.8138981489887577	0.9309427269334315	0.2437920017994628	0.07763173531100737	0.2721452336005801	8.597042199036329	0.02635213860142595	0.025784773670456018	6.266544135768307e-09	8.20297189721342	0.11704457794467382	
EKRT(ph)PAPEPEPCEASELPAKR	ddPTM_K562_Methotrexat_30min_R1	1	EKRTPAPEPEPCEASELPAKR	21	3	H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3	H0Y5D5	CIZ1	Cip1-interacting zinc finger protein	1	EKRT(1)PAPEPEPCEASELPAKR	54.943000000000005	0.023787	0.0	952.89	651.27	1423.5	868.09	422.49	559.92	592.77	470.43	534.22	960.36	True	False	911.0020965582694	758.8812978027897	1124.7268032784993	791.9858974966733	478.0548403747704	668.1166155771416	725.7137618491972	453.8847102577377	509.38422880340283	786.4294979213314	1.1584027544315223	0.9649705406633954	1.4301686371777076	1.0070653499010762	0.607880098137661	0.8495569117677921	0.9227957035784945	0.5771460905998989	0.6477176023404425	1.0	9.619173626034465	-7.554303802287872	6.532173440139606	0.7607995100612269	1.1720803129476642	0.5675361435993622	0.16467677961461552	0.12609934969456557	16.80614921209336	0.048404944656949694	0.0635724168236377	2.790591054411457e-08	7.554303802287872	0.4112808028864373	
EKSTFREES(ph)PLR	ddPTM_K562_Methotrexat_30min_R1	1	EKSTFREESPLR	12	2	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4;E9PJA7	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	EKSTFREES(1)PLR	123.26	0.017289	79358000.0	11816.0	8903.7	16488.0	11202.0	9419.7	8788.8	8319.9	11365.0	11487.0	13553.0	True	False	11296.582788078913	10374.885087976867	13027.394121851688	10219.938052226995	10658.555657833856	10487.11121407412	10185.849363512223	10965.286508256679	10952.971877250358	11098.420368744853	1.0178550111412359	0.9348073638654387	1.1738061533999173	0.9208461846523832	0.9603669084161081	0.9449192646917314	0.9177746945139513	0.9880042514101283	0.9868946672894006	1.0	13.438066732850091														
EKT(ph)PELPEPSVK	ddPTM_K562_Methotrexat_30min_R1	1	EKTPELPEPSVK	12	1	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2;M0R088	A9Z1X7;M0R088	SRRM1	Serine/arginine repetitive matrix protein 1	1	EKT(0.927)PELPEPS(0.073)VK	122.33	0.018175999999999998	52237000.0	3058.8	1836.5	5351.2	3186.3	1780.4	1513.1	1516.9	1943.2	2206.5	3620.3	True	False	2924.3388145037047	2139.95040983743	4228.056248474817	2906.9620260498914	2014.5538067249902	1805.4851604332277	1857.1034386845622	1874.856554583755	2103.920296609465	2964.6285885757384	0.9864098409401801	0.721827488975778	1.426167265865183	0.980548469798859	0.6795299129503499	0.6090088881253809	0.626420269250911	0.6324085795463742	0.7096741577400179	1.0	11.533635658578943	-7.723796091868617	5.163557062548385	0.681013174958096	1.0403981549766133	0.3966807903196953	0.19169355989260026	0.1816595065029372	11.560481139424066	0.05757114904034672	0.07288027387931471	1.888877999041435e-08	7.723796091868617	0.35938498001851726	
EKTPELPEPS(ph)VK	ddPTM_K562_Methotrexat_30min_R1	1	EKTPELPEPSVK	12	1	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2;M0R088	A9Z1X7;M0R088	SRRM1	Serine/arginine repetitive matrix protein 1	1	EKT(0.084)PELPEPS(0.916)VK	148.62	1.163e-08	50857000.0	2544.9	1846.3	5558.2	3165.3	1869.0	1853.1	1432.9	2086.3	2349.5	4264.1	True	False	2433.029243177219	2151.3696932659113	4391.60977729719	2887.803063445286	2114.8062596995096	2211.1853484890717	1754.2643004094593	2012.9236464739029	2240.272257821862	3491.8301700261873	0.6967776566175246	0.6161152142315607	1.2576813772315434	0.8270170434502057	0.6056440768090533	0.6332453873243465	0.5023910714409983	0.576466651715426	0.641575377019284	1.0	11.76976767787366	-7.713243151593217	5.957904163234232	0.6294333956457762	0.8646751559284231	0.16662837338602754	0.20053153196876491	0.2973995175334347	24.005372241212584	0.06042182945169278	0.07722603785906466	1.935338108815027e-08	7.713243151593217	0.23524176028264698	
ELAEDGYSGVEVR	ddPTM_K562_Methotrexat_30min_R1	1	ELAEDGYSGVEVR	13	0	E9PPU1;H0YEU2;E9PL09;P23396;P23396-2;E9PQ96;E9PJH4;F2Z2S8;H0YF32;E9PK82;H0YCJ7	E9PPU1	RPS3	40S ribosomal protein S3	0		112.13	0.00099522	0.0	1004.8	687.2	1011.6	1061.6	1119.2	1053.4	1028.9	1050.0	967.69	1042.9	False	True	960.6301951135484	800.7481195972131	799.2789843319493	968.5311762403301	1266.394417258261	1256.9546414647816	1259.6570163244414	1013.0709048543346	922.7023031162531	854.0207040923781	1.1248324431835304	0.9376214367639001	0.9359011795637833	1.134083953233487	1.4828614940947347	1.471808160436376	1.4749724570941858	1.1862369378163837	1.0804214683493738	1.0	9.73812723541596	-7.53811275199853	6.852447882261258	1.311592207474285	0.9992917534058744	0.36782266783915074	0.164805805348872	0.15001400650303054	32.16326108046203	0.05081300087213731	0.06758256607161181	2.8965914738924903e-08	7.53811275199853	-0.31230045406841056	
ELAPAWEDT(ph)SPEQDNRYWR	ddPTM_K562_Methotrexat_30min_R1	1	ELAPAWEDTSPEQDNRYWR	19	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	ELAPAWEDT(0.5)S(0.5)PEQDNRYWR	80.508	0.032579000000000004	156540000.0	2126.0	1788.7	2115.5	1789.0	2197.0	1940.9	1993.2	2646.4	2469.6	2673.4	True	False	2032.543585600523	2084.2522722985086	1671.4854600180286	1632.1611476016865	2485.944008860257	2315.9514558752558	2440.2258382135055	2553.3246120062004	2354.788835035907	2189.2213542243385	0.9284321942495725	0.952051864594103	0.7635068316836565	0.7455441380800785	1.1355379866286066	1.0578882082464516	1.114654684646131	1.166316328442204	1.0756284788160357	1.0	11.096202118804733	-7.770995446454943	24.999998396253808	1.0994468474577224	0.8488688368854799	0.7289053422201064	0.07288983718261537	106.48229470934093	278571.62203999405	0.023920215679620657	0.027468278378369574	1.6943555655451687e-08	7.770995446454943	-0.2505780105722425	
ELAPAWEDTS(ph)PEQDNR	ddPTM_K562_Methotrexat_30min_R1	5	ELAPAWEDTSPEQDNR	16	0	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	ELAPAWEDT(0.136)S(0.864)PEQDNR;ELAPAWEDT(0.228)S(0.772)PEQDNR;ELAPAWEDT(0.066)S(0.934)PEQDNR;ELAPAWEDT(0.211)S(0.789)PEQDNR;ELAPAWEDT(0.032)S(0.968)PEQDNR	277.94	2.3848999999999994e-129	183321900.0	12695.800000000001	10953.55	14319.099999999999	10486.660000000002	12995.399999999998	11393.3	9939.98	14202.300000000001	13876.7	13055.599999999999	True	False	12137.707833521685	12763.437958984357	11313.716592079489	9567.31079939	14704.522882449979	13594.893978166598	12169.27354371137	13702.797059059734	13231.575245846605	10691.104328649388	1.1353090813075104	1.193837190867332	1.058236478130857	0.8948851779279795	1.3753979411692456	1.2716080173061082	1.1382616023211813	1.2817008082448313	1.237624742879874	1.0	13.384123262278436	-7.7704429415008915	24.999932691438396	1.230267454118115	1.0784912319774753	0.2685581865507467	0.11730904059015948	259.0663987331254	719340.5693438359	0.036348694278261505	0.04180883439175131	1.6965124789052066e-08	7.7704429415008915	-0.15177622214063957	
ELAQPSGGHLPQAS(ph)PISVYLFPGER	ddPTM_K562_Methotrexat_30min_R1	1	ELAQPSGGHLPQASPISVYLFPGER	25	0	H7C3T2;Q2TAZ0;Q2TAZ0-3	H7C3T2	ATG2A	Autophagy-related protein 2 homolog A	1	ELAQPS(0.001)GGHLPQAS(0.741)PIS(0.236)VY(0.022)LFPGER	54.934	0.010334000000000001	5502200.0	1145.4	850.16	987.11	1193.9	761.71	976.36	1130.3	1389.7	1211.6	1581.3	True	False	1095.0495874632354	990.634489750825	779.9291006562969	1089.232640649331	861.8882161988829	1165.027751794717	1383.7985475279577	1340.8234633105417	1155.2729804541252	1294.9112468897092	0.8456560942639674	0.7650211488472768	0.6023031327665388	0.8411639355713338	0.6655963628928864	0.8996969905026589	1.0686435466922926	1.0354558789500907	0.8921638322541519	1.0	10.338637503763081	-8.477134928613538	4.621705629465722	1.00113282415571	0.7439027812301121	0.6935127418689082	0.0802804740751483	0.11744676985796611	5.583633739916357	0.029469064047398325	0.02491295357241579	3.333228383971523e-09	8.477134928613538	-0.2572300429255979	
ELAYLSELPPTPLHVSEDS(ph)SSPER	ddPTM_K562_Methotrexat_30min_R1	2	ELAYLSELPPTPLHVSEDSSSPER	24	0	Q96EB6;B0QZ35;E9PC49	Q96EB6	SIRT1	NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment	1	ELAYLSELPPTPLHVS(0.163)EDS(0.279)S(0.279)S(0.279)PER;ELAYLSELPPTPLHVS(0.006)EDS(0.567)S(0.345)S(0.082)PER	128.33	1.1731999999999999e-14	6866600.0	2239.5	1885.1	2271.6	1840.49	1970.3600000000001	1830.0900000000001	2148.5	2369.4	2382.8999999999996	2555.7	True	False	2141.0542615015847	2196.580733778675	1794.8222032507474	1679.1370992450693	2229.496876330403	2183.728991644469	2630.3558164768797	2286.066859011295	2272.1194991120287	2092.8379647606575	1.023038714679682	1.0495703780057726	0.8576020855279199	0.8023254200843494	1.0652983718141669	1.0434295575740886	1.2568368219455988	1.0923286453630134	1.0856643167651416	1.0	11.03124490180488	-7.9589137773478855	12.42699833511706	1.1051602776289229	0.9357041451402207	0.41902441589644746	0.09105093405585284	0.9870946509357045	296.5653155279296	0.030117838809713006	0.03414244857222176	1.0992240522103597e-08	7.9589137773478855	-0.16945613248870217	
ELDDDERDVDAS(ph)PTAGLQEAATLAPTRR	ddPTM_K562_Methotrexat_30min_R1	1	ELDDDERDVDASPTAGLQEAATLAPTRR	28	2	Q92508	Q92508	PIEZO1	Piezo-type mechanosensitive ion channel component 1	1	ELDDDERDVDAS(0.756)PT(0.181)AGLQEAAT(0.056)LAPT(0.007)RR	67.31	0.0016475	14747000.0	1433.2	1477.4	1709.4	1494.2	1181.4	1423.9	1113.4	1447.7	1669.2	1971.2	True	False	1370.198244065225	1721.515238493776	1350.620300333169	1363.205805895159	1336.7748074954518	1699.0485228609302	1363.108292327373	1396.7835704358283	1591.5992563337948	1614.1965786814606	0.8488422427362948	1.066484256768762	0.8367136432889785	0.8445104046798807	0.8281363157065927	1.0525660537880586	0.8444499947093269	0.8653119383865726	0.9860008857371485	1.0	10.656600567007294														
ELDEEGS(ph)DPPLPGR	ddPTM_K562_Methotrexat_30min_R1	4	ELDEEGSDPPLPGR	14	0	C9JQV0;Q9BRJ6;H7C0T1;H7C2R9	C9JQV0	C7orf50	Uncharacterized protein C7orf50	1	ELDEEGS(1)DPPLPGR;ELDEEGS(1)DPPLPGR;ELDEEGS(1)DPPLPGR;ELDEEGS(1)DPPLPGR	190.27	2.181e-06	50987900.0	11003.6	8327.4	12582.3	11182.5	8928.7	8446.300000000001	8413.9	10352.4	10163.2	12690.4	True	False	10519.894919338616	9703.36130840197	9941.447177303158	10202.147586951289	10102.980551620658	10078.427936400216	10300.931256343885	9988.300224203818	9690.715050306506	10392.04558750975	1.0123026146057834	0.9337296710923293	0.9566400660570458	0.9817266005081136	0.9721840100243092	0.96982137458226	0.9912323006670241	0.9611486150723593	0.9325127539811625	1.0	13.343192044232522	-6.228210780100237	23.590394389000533	0.9665543498979332	1.0123028040161468	0.3014877244865013	0.02089014503826879	9469.585281807684	6722623.95244705	0.005178997653430646	0.7642414554578248	5.912745958355685e-07	6.228210780100237	0.0457484541182136	
ELDEGRYGVYEDENYEVGS(ph)DDEEIPFK	ddPTM_K562_Methotrexat_30min_R1	3	ELDEGRYGVYEDENYEVGSDDEEIPFK	27	1	O15541	O15541	RNF113A	RING finger protein 113A	1	ELDEGRYGVYEDENY(0.461)EVGS(0.539)DDEEIPFK;ELDEGRYGVYEDENY(0.067)EVGS(0.933)DDEEIPFK;ELDEGRY(0.001)GVY(0.001)EDENY(0.025)EVGS(0.972)DDEEIPFK	100.24	5.6245000000000005e-08	42918300.0	3079.05	2141.0	3792.36	3496.44	2009.57	2475.66	1927.04	3270.8	3379.27	4181.429999999999	True	False	2943.6986487503696	2494.7638592224002	2996.3954616657884	3189.9125337733044	2273.863678600505	2954.046257536266	2359.2277740673076	3155.7641100929122	3222.1684752882225	3424.1325081148657	0.8596918027483125	0.7285827441870457	0.8750816314977935	0.9315972808334717	0.6640700011496827	0.8627137678040963	0.6890001390063509	0.9216244122019385	0.9410174599411653	1.0	11.741522817330234	-9.460889985173017	8.041505338491369	0.9578898357013721	0.8034895082100628	0.4231507958510595	0.08271964616671204	0.2998597751762518	36.0180229918614	0.044703454147121256	0.02118655959093153	3.4602702177106587e-10	9.460889985173017	-0.15440032749130927	
ELDLS(ph)ELDDPDSAYLQEAR	ddPTM_K562_Methotrexat_30min_R1	1	ELDLSELDDPDSAYLQEAR	19	0	Q9UER7-2;Q9UER7;Q9UER7-3;Q9UER7-5;Q9UER7-4	Q9UER7-2	DAXX	Death domain-associated protein 6	1	ELDLS(1)ELDDPDSAYLQEAR	127.91	2.5472999999999997e-06	8185100.0	1365.4	989.6	1187.2	1112.5	1228.7	1312.2	1264.2	1279.7	1292.0	1417.7	True	False	1305.378650883797	1153.1145796760795	938.0229440479336	1014.9688522676778	1390.2955865664985	1565.7640787261123	1547.7290310402943	1234.6922256591345	1231.9352020029123	1160.9407922061225	1.1244144918047034	0.9932587324154827	0.8079851706006638	0.874264096051741	1.1975594241326775	1.348702784188252	1.3331679284859674	1.0635272995385603	1.061152481051062	1.0	10.181078681526424	-7.769976635785196	24.992958799934826	1.1878864301665863	0.9429293804730651	0.39112537914243894	0.1312573652849612	186.2719461891699	545312.9336049621	0.04378503336347868	0.05042992007745937	1.6983350171888187e-08	7.769976635785196	-0.24495704969352128	
ELDPSLVSANDS(ph)PSGMQTR	ddPTM_K562_Methotrexat_30min_R1	4	ELDPSLVSANDSPSGMQTR	19	0	Q5UIP0-2;Q5UIP0;H7C2B5	Q5UIP0-2	RIF1	Telomere-associated protein RIF1	1	ELDPSLVS(0.001)ANDS(0.659)PS(0.339)GMQT(0.001)R;ELDPS(0.002)LVS(0.122)ANDS(0.852)PS(0.023)GMQTR;ELDPSLVS(0.001)ANDS(0.496)PS(0.496)GMQT(0.008)R;ELDPSLVS(0.002)ANDS(0.9)PS(0.098)GMQTR	139.12	4.7045e-09	238416000.0	8159.0	7254.59	10426.900000000001	8874.599999999999	7594.0	6851.2699999999995	7342.0	9047.0	8653.9	9182.7	True	False	7800.340129310747	8453.287690554052	8238.436182019372	8096.577596705383	8592.744107093671	8175.180963004005	8988.63039542623	8728.811882111582	8251.582077873842	7519.624047817702	1.037331132475235	1.1241636066908574	1.095591498940732	1.0767263822258668	1.1427092700980712	1.0871794801199608	1.1953563553532776	1.1608042937525318	1.0973397107889407	1.0	12.876444819183703	-7.7543441646245626	24.96308564307015	1.1246753735399257	1.0872280659766345	0.04930455437021164	0.053251876548904994	389.7511707379012	1371249.2930411668	0.015295417323485183	0.019330042502990318	1.760580289309185e-08	7.7543441646245626	-0.03744730756329129	
ELDPSLVSANDSPS(ph)GMQTR	ddPTM_K562_Methotrexat_30min_R1	1	ELDPSLVSANDSPSGMQTR	19	0	Q5UIP0-2;Q5UIP0;H7C2B5	Q5UIP0-2	RIF1	Telomere-associated protein RIF1	1	ELDPSLVS(0.04)ANDS(0.23)PS(0.705)GMQT(0.025)R	125.59	2.9213000000000003e-05	19229000.0	2352.4	2249.0	3093.1	2537.8	2099.3	2242.3	2214.4	2585.3	2643.7	2689.0	True	False	2248.9913126842284	2620.6090235362803	2443.9005797124864	2315.3150141886877	2375.394746381584	2675.592740228289	2711.0355690046094	2494.373533638012	2520.794964036456	2201.9960430572487	1.021342122650562	1.190106145648577	1.109856935219274	1.051461932226775	1.0787461466477426	1.215076089107544	1.231171862253036	1.1327783905437117	1.1447772451655214	1.0	11.104596161072628	-8.234698244668522	24.477330351371062	1.1584600775972302	1.0947758206989182	0.11056523899964876	0.0716167634761906	1101.2390072202152	1008012.8924255336	0.023277417938080695	0.0232681185958804	5.8250781371711915e-09	8.234698244668522	-0.06368425689831203	
ELDQDMVT(ph)EDEDDPGSHKR	ddPTM_K562_Methotrexat_30min_R1	1	ELDQDMVTEDEDDPGSHKR	19	1	Q9NRL2;Q9NRL2-2;A0A087WWN7	Q9NRL2	BAZ1A	Bromodomain adjacent to zinc finger domain protein 1A	1	ELDQDMVT(1)EDEDDPGSHKR	61.806999999999995	0.016141	10685000.0	2769.9	1937.4	3049.4	2384.4	1940.6	1672.5	1907.9	2658.3	2926.8	3428.5	True	False	2648.138512584611	2257.522419830676	2409.3726125166504	2175.363354019822	2195.8229146992335	1995.6869544805838	2335.7951418460525	2564.8060822612165	2790.7337068282695	2807.5654271557382	0.9432152451269362	0.804085417919434	0.8581714923586001	0.7748219624657576	0.7821092585983853	0.710824736327643	0.831964633576635	0.9135338601385848	0.9940048697833836	1.0	11.45510392806562	-9.466939140278134	2.3445363158277663	0.997545979307593	0.8087480534069332	0.6271471927235687	0.05689658458252907	0.2094291598718201	2.1408069011037774	0.04734128805025293	0.016548075150973594	3.412407279345437e-10	9.466939140278134	-0.1887979259006598	
ELDS(ph)EFEDLASDVR	ddPTM_K562_Methotrexat_30min_R1	1	ELDSEFEDLASDVR	14	0	Q8NEN9	Q8NEN9	PDZD8	PDZ domain-containing protein 8	1	ELDS(1)EFEDLASDVR	131.96	0.00035243	2126300.0	488.92	258.4	478.2	572.57	467.26	410.17	336.51	354.76	398.45	587.33	True	False	467.4276622162781	301.0962079509893	377.83235498965814	522.3736770722736	528.7128801001564	489.4295474554864	411.9809335827951	342.282889720118	379.926146469087	480.95884565593695	0.9718662343735359	0.6260332056900856	0.7855814658619413	1.0861088880896965	1.0992892320736756	1.0176121135437213	0.8565825065987319	0.7116677296023298	0.7899348351748049	1.0	8.909769641549213	-12.30567288297278	3.954592310114086	1.0002097649284363	0.8828501110084359	0.051418326751647814	0.1510918417937127	139219067.0628144	89.8098526208123	266670.8292110957	0.04088735386476994	4.946831493618715e-13	12.30567288297278	-0.11735965392000036	
ELEEEEENS(ph)DEDELDSHTMVK	ddPTM_K562_Methotrexat_30min_R1	1	ELEEEEENSDEDELDSHTMVK	21	0	E5RFQ9;A0A087WZ06;Q13188;Q13188-2	E5RFQ9	STK3	Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit	1	ELEEEEENS(0.979)DEDELDS(0.016)HT(0.005)MVK	82.639	0.020059999999999998	12416000.0	1585.7	1045.9	2612.4	1573.1	1276.1	1132.7	977.93	1457.5	1493.9	2191.6	True	False	1515.9945266635696	1218.7171977397054	2064.0929405583083	1435.1887653953122	1443.929517390339	1351.5782441495717	1197.255696349656	1406.2388988811356	1424.4489150713252	1794.6800029617941	0.8447157845196333	0.6790721441863917	1.1501175346869064	0.7996906206269604	0.8045609885926154	0.7531026377510401	0.6671137441626377	0.7835596856043379	0.7937063502800111	1.0	10.809510914618372	-7.494569108786806	24.991408204966362	0.7824616570182212	0.8875497020900802	0.08055921613761763	0.1327951641772413	1594.98641274939	1408035.5138472149	0.03691091307845299	0.05461587576730845	3.202070512247874e-08	7.494569108786806	0.10508804507185898	
ELEELERER	ddPTM_K562_Methotrexat_30min_R1	1	ELEELERER	9	1	Q02040;X6RAJ1;Q02040-2;Q02040-3	Q02040	AKAP17A	A-kinase anchor protein 17A	0		76.221	0.015787	0.0	1535.6	1571.7	2178.8	2521.4	1574.1	1623.4	1855.2	1466.7	1670.4	2331.4	False	True	1468.0968626755232	1831.3967106678394	1721.4996550637106	2300.3527767260425	1781.1217407132128	1937.0990743819311	2271.2758253329803	1415.115329666526	1592.7434685957157	1909.1608682720964	0.7689749392382202	0.9592678862757971	0.9017048713248401	1.2049025385733985	0.9329343432045271	1.0146337621800936	1.1896723126263422	0.7412237246132585	0.8342636260071907	1.0	10.898722955806388	-12.284702107008178	4.524974344981501	1.0000240954515929	0.9584433367919166	0.007188880058604297	0.14823637123541183	249080344.8216454	2.1260982084943287	62532.89082922669	0.03663873633850271	5.191560183807539e-13	12.284702107008178	-0.041580758659676254	
ELEEWYAR	ddPTM_K562_Methotrexat_30min_R1	1	ELEEWYAR	8	0	P09496-5;P09496-2;C9J8P9;F8WF69;P09496-4;P09496-3;P09496	P09496-5	CLTA	Clathrin light chain A	0		130.27	0.0029346999999999997	19236000.0	1661.9	1646.8	1876.7	1495.5	1653.8	1481.1	1271.7	1876.9	1895.1	1746.1	False	True	1588.8448659028722	1918.9057091861036	1482.8063166229422	1364.3918369135392	1871.303687689164	1767.3016133220895	1556.9110969577137	1810.8883631629526	1806.9972146406494	1429.864369945058	1.1111857175404147	1.3420193897550137	1.0370258520952715	0.9542106689223717	1.3087281052825088	1.2359924832520985	1.0888522923454185	1.266475619105423	1.2637542781138624	1.0	10.481662591045012	-6.760564756588002	24.99999989583011	1.1542634777509702	1.226602489909179	0.05779490011161037	0.12790719728671474	79.60182972888387	2274994.285051609	0.033887904162422065	0.07959231964001394	1.7355424610856865e-07	6.760564756588002	0.07233901215820882	
ELEFYLR	ddPTM_K562_Methotrexat_30min_R1	1	ELEFYLR	7	0	Q5JR95;P62241	Q5JR95	RPS8	40S ribosomal protein S8	0		124.34	0.017247	20571000.0	3629.5	3167.9	3684.9	3750.4	3191.4	2425.2	3061.6	3875.3	3894.1	4553.9	False	True	3469.9515258405895	3691.341629906883	2911.489847137999	3421.608254871639	3611.1250386329643	2893.835576685391	3748.2417350363585	3739.003502459049	3713.064140959398	3729.1445818067687	0.9304953052153853	0.9898628355456334	0.7807393313046027	0.9175316697465968	0.9683521138468104	0.7760051972249703	1.0051210546576173	1.0026437485691433	0.9956879009395824	1.0	11.864629017255547														
ELEQHIQT(ph)SDPENFQSEER	ddPTM_K562_Methotrexat_30min_R1	1	ELEQHIQTSDPENFQSEER	19	0	Q96K76-2;Q96K76-4;Q96K76	Q96K76-2	USP47	Ubiquitin carboxyl-terminal hydrolase 47	1	ELEQHIQT(0.5)S(0.5)DPENFQSEER	137.64	1.6398e-08	18342000.0	3315.9	2828.3	3733.9	2715.1	2731.1	3055.6	2502.3	3533.3	3028.3	3233.1	True	False	3170.137006346554	3295.628502119905	2950.2054167626193	2477.071398464695	3090.2875205271944	3646.0514547748116	3063.5044726879682	3409.0318363064976	2887.514993982526	2647.554260620449	1.197383205133495	1.244782232092037	1.1143134857116184	0.9356074152316706	1.1672234886710091	1.3771394637707508	1.1571073417660729	1.2876154747844895	1.0906348689170369	1.0	11.37044453667039	-7.9974561838072455	24.999662639415142	1.2070320756144792	1.1211366188147032	0.03196562955814186	0.12243475690048401	205.24711598519286	2017046.356117566	0.03851336448119222	0.043419923647472575	1.0058745410802915e-08	7.9974561838072455	-0.08589545679977606	
ELES(ph)LLS(ph)QRIY(ph)CPDS(ph)R	ddPTM_K562_Methotrexat_30min_R1	3	ELESLLSQRIYCPDSR	16	1	A0A590UK78;A0A590UKC0;Q9Y2M0	A0A590UK78	FAN1	Fanconi-associated nuclease 1	4	ELES(1)LLS(1)QRIY(1)CPDS(1)R;ELES(1)LLS(1)QRIY(1)CPDS(1)R;ELES(1)LLS(1)QRIY(1)CPDS(1)R	69.37899999999999	0.014136000000000001	1996532000.0	0.0	0.0	0.0	52.06399999999999	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	47.49962995457473	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
ELFDDPS(ph)YVNVQNLDK	ddPTM_K562_Methotrexat_30min_R1	1	ELFDDPSYVNVQNLDK	16	0	H0Y539;X6R6D0;P29353-5;P29353-3;P29353-2;P29353-7;P29353;P29353-6;Q5T188	H0Y539	SHC1	SHC-transforming protein 1	1	ELFDDPS(0.639)Y(0.361)VNVQNLDK	215.53	8.6159e-24	52167000.0	3662.3	2498.2	3882.8	3251.2	1847.2	2113.5	1870.8	3056.4	2986.8	3525.3	True	False	3501.309677114202	2910.985087860533	3067.853341601512	2966.172343813641	2090.139177590653	2521.9039631059572	2290.3745224412132	2948.904679615989	2847.944319924381	2886.834009144561	1.2128545202194443	1.008365939516948	1.062705140608549	1.027482818346244	0.7240247173788881	0.8735881436609715	0.7933862893349752	1.0215012952857034	0.9865286022344928	1.0	11.495272440705453	-6.801106139862026	1.105976768196427	0.9013840839224733	1.189645946629814	0.42803892667802657	0.10066068607689489	0.8028653087826467	1.4562692710245837	0.03595496209345557	0.22091396942445207	1.5808616356929422e-07	6.801106139862026	0.28826186270734067	
ELFDDPSY(ph)VNVQNLDK	ddPTM_K562_Methotrexat_30min_R1	1	ELFDDPSYVNVQNLDK	16	0	H0Y539;X6R6D0;P29353-5;P29353-3;P29353-2;P29353-7;P29353;P29353-6;Q5T188	H0Y539	SHC1	SHC-transforming protein 1	1	ELFDDPS(0.184)Y(0.816)VNVQNLDK	164.48	3.8739999999999995e-08	51847000.0	3783.3	2547.3	4599.7	3699.3	2753.7	2393.3	2676.6	3337.6	4020.1	4253.6	True	False	3616.990661995509	2968.198028303231	3634.285828619675	3374.988112533774	3115.859816658395	2855.7713531589743	3276.895684608804	3220.214716230313	3833.206428461233	3483.2318217732663	1.038400786128024	0.8521390995997967	1.0433660504311508	0.9689243453269822	0.8945312790212605	0.8198625584745433	0.9407630190231153	0.9244904964697254	1.1004741069774102	1.0	11.766210777395234	-9.748280590082256	24.885597389208286	1.0502370481734895	0.9322339581513062	0.29381405196008537	0.07114223201786263	230.65561145575566	436216.2847619967	0.0487197425869814	0.018169088580027346	1.785333729200761e-10	9.748280590082256	-0.11800309002218334	
ELGDDS(ph)LPAEGYMGFSLGAR	ddPTM_K562_Methotrexat_30min_R1	1	ELGDDSLPAEGYMGFSLGAR	20	0	Q12955;A0A087X0L3;D6RBY7;D6RF31;H0Y8Z4;D6RFK6;B1AQT1;A0A087WZ26;Q12955-6;Q12955-7;Q12955-5;Q12955-4	Q12955	ANK3	Ankyrin-3	1	ELGDDS(0.843)LPAEGY(0.011)MGFS(0.146)LGAR	59.513000000000005	0.032806999999999996	15803000.0	0.0	46.103	141.38	136.92	112.73	0.0	151.77	115.82	153.9	135.67	True	False	0.0	53.7207371329894	111.70627007201557	124.91643618201388	127.55597092344871	0.0	185.80828590490867	111.74654495259904	146.74522259152343	111.09884833082076	0.0	0.48354000009995	1.0054673990803764	1.1243720169812046	1.1481304517543092	0.0	1.672459154136544	1.005829913014486	1.3208527792705638	1.0	6.795700051361988	-6.540210700495287	2.36629029505565	1.0325162725756019	2.3001247271014536e-12	0.4128742818649729	0.3985747722295619	0.3500925754106784	3.4062415749265105	0.10643327835557881	0.5786994296392843	2.882632637820406e-07	6.540210700495287	-1.0325162725733017	
ELGS(ph)PTDEDSGQDQQLLR	ddPTM_K562_Methotrexat_30min_R1	2	ELGSPTDEDSGQDQQLLR	18	0	H0Y713;Q86YN6-6;Q86YN6-5;Q86YN6-4;Q86YN6-2;Q86YN6-3;Q86YN6	H0Y713	PPARGC1B	Peroxisome proliferator-activated receptor gamma coactivator 1-beta	1	ELGS(0.91)PT(0.089)DEDS(0.001)GQDQQLLR;ELGS(0.747)PT(0.251)DEDS(0.002)GQDQQLLR	151.31	6.8562e-13	16250200.0	1324.46	1225.04	1694.4	1351.57	1374.6100000000001	1063.54	1051.58	1698.3799999999999	1507.88	1630.51	True	False	1266.2383242636258	1427.4570378803403	1338.768595346041	1233.0799565477978	1555.3953090666353	1269.0540529556235	1287.4235836587195	1638.6470127490527	1437.7789879227187	1335.2088390350598	0.9483447736750469	1.0690889665709127	1.0026660670652494	0.9235109298998729	1.164907888260163	0.9504536038517798	0.9642113997605991	1.2272589611774023	1.076819555030646	1.0	10.382849695096745	-9.233991956437416	24.99729443907928	1.1140295075717679	1.00692993484947	0.2153873064379337	0.08452963562697952	958.3945174303861	872844.347439278	0.03829483906991843	0.022103267798808047	5.834559103531808e-10	9.233991956437416	-0.10709957272229786	
ELGSLPLPLST(ph)SEQR	ddPTM_K562_Methotrexat_30min_R1	1	ELGSLPLPLSTSEQR	15	0	B1AJQ6;Q86Y82	B1AJQ6	STX12	Syntaxin-12	1	ELGSLPLPLS(0.07)T(0.465)S(0.465)EQR	121.45	0.0015669	3267400.0	1406.8	1333.2	1543.7	1644.4	1483.7	1502.9	1167.3	1481.1	1597.4	1658.3	True	False	1344.9587564547573	1553.488639474687	1219.6984659086893	1500.2380050957029	1678.8325561884217	1793.314154791552	1429.0967393872302	1429.0088735045288	1523.137222662115	1357.9658007444534	0.990421670205122	1.143982152292087	0.8981805471389895	1.1047686210309966	1.2362848572976324	1.3205885993656359	1.052380508112783	1.052315804066	1.121631503405397	1.0	10.407231431610228	-6.249511424421754	23.051353763594452	1.1079661460766554	0.9904214526954365	0.08279261195816245	0.11181302800486288	1751.1309604948096	3383955.5359113533	0.029807652100410753	0.43947936191778103	5.629743077643912e-07	6.249511424421754	-0.11754469338121898	
ELHPQLLS(ph)PTK	ddPTM_K562_Methotrexat_30min_R1	4	ELHPQLLSPTK	11	0	E9PK89;Q8TBN0	E9PK89	RAB3IL1	Guanine nucleotide exchange factor for Rab-3A	1	ELHPQLLS(0.975)PT(0.025)K;ELHPQLLS(0.994)PT(0.006)K;ELHPQLLS(0.965)PT(0.035)K;ELHPQLLS(0.976)PT(0.024)K	113.43	0.0016082000000000002	132922000.0	27640.200000000004	21658.399999999998	38230.0	28067.9	22538.2	20595.800000000003	19526.7	26777.9	26703.3	32029.7	True	False	26425.169903440998	25237.08247014591	30206.045443861607	25607.230785226042	25502.368347971907	24575.646862236914	23906.059539957692	25836.1060791418	25461.869411489475	26228.8109558612	1.0074863838818404	0.9621893463876724	1.1516360956923835	0.9763016260370637	0.9723036393410369	0.9369714434860851	0.9114427482125546	0.9850277285775455	0.9707595763428863	1.0	14.678864786200572	-7.500193432511335	24.985179012752965	0.9596164673225615	1.037838548349532	0.3267548814730421	0.04998913568632011	885.7753741079357	975577.1964006142	0.014188259871041962	0.02086414347662038	3.160869511702603e-08	7.500193432511335	0.07822208102697059	
ELHSWEPEPDVR	ddPTM_K562_Methotrexat_30min_R1	2	ELHSWEPEPDVR	12	0	Q9BTY7	Q9BTY7	HGH1	Protein HGH1 homolog	0	;	101.56	0.009553200000000001	19000200.0	4317.5	4303.0	5581.7	5032.5	4387.4	4559.7	4286.6	4712.1	3960.0	4815.1	False	True	4127.707869628528	5013.997611505833	4410.177448443695	4591.308538460308	4964.420002036185	5440.797492583035	5247.979168214941	4546.372772156295	3775.9004643432936	3943.0387307270203	1.046834218863343	1.271607497139991	1.1184717548109255	1.1644086837599386	1.2590340448217818	1.3798488587455129	1.3309479126641282	1.1530124562885111	0.9576118121586623	1.0	11.945092166133273	-9.641200803419817	4.1820837393441135	0.9800971857211696	1.2280730843725824	0.517403752053949	0.09328345066472554	0.1838854754847001	5.5632746563147455	0.07678705857300386	0.025801067735752314	2.2845422622761055e-10	9.641200803419817	0.2479758986514129	
ELHYLPFPS(ph)P	ddPTM_K562_Methotrexat_30min_R1	1	ELHYLPFPSP	10	0	Q8N565	Q8N565	MREG	Melanoregulin	1	ELHYLPFPS(1)P	108.43	0.0033563000000000004	5136500.0	3520.9	3148.7	4110.9	4268.4	3140.6	2954.4	3293.3	3964.1	4112.0	4449.5	True	False	3366.125451806622	3668.9691562510857	3248.0782687724463	3894.1959991185226	3553.6439482141686	3525.29598703584	4031.9063581118494	3824.6803561267297	3920.834017520109	3643.6524334634564	0.9238327511405822	1.006948171717785	0.8914347150518418	1.0687616533767226	0.9752971813604816	0.9675170866077604	1.1065562458928992	1.0496830929867804	1.076072454526948	1.0	11.83116963226703	-7.959312279790063	0.752662546818058	1.0573430785471705	0.9489474459136764	0.3385790340194561	0.0534555503730516	0.7893302163984283	0.9933246054387939	0.032993616883151625	0.04532338692675833	1.0982158824597044e-08	7.959312279790063	-0.10839563263349405	
ELILGSETPS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	1	ELILGSETPSSPR	13	0	R4GNJ5;A0A590TQL1;Q96AP0-2;Q96AP0	R4GNJ5	ACD	Adrenocortical dysplasia protein homolog	1	ELILGS(0.003)ET(0.031)PS(0.75)S(0.216)PR	152.0	1.7335e-09	36031000.0	1879.3	1634.9	2081.6	1951.2	1377.1	1482.2	1428.3	1752.5	1629.7	1744.8	True	False	1796.6882222102822	1905.039436451518	1644.7006067471175	1780.141325433432	1558.2127877111786	1768.614172754034	1748.6326333134423	1690.8635816735436	1553.9356027121876	1428.7998125423164	1.257480723638512	1.3333144501620635	1.1511063987477999	1.2458997473312658	1.0905746025670264	1.2378320302317742	1.223847188362963	1.1834153160091248	1.0875810516430657	1.0	10.480588080953144	-15.999999986835089	0.07263175897545016	0.2746010528149362	1.4494380693055022	0.5893875582181238	0.06041500103048391	214.04483507687692	1.1123681520989481	25.39774651604231	2.926012607416399	1.0000000303133281e-16	15.999999986835089	1.174837016490566	
ELILGSETPSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	ELILGSETPSSPR	13	0	R4GNJ5;A0A590TQL1;Q96AP0-2;Q96AP0	R4GNJ5	ACD	Adrenocortical dysplasia protein homolog	1	ELILGSETPS(0.206)S(0.794)PR	191.19	1.2522e-05	31570000.0	2820.6	2343.4	2258.0	2314.8	2636.0	2072.3	2345.6	2691.5	2546.9	2580.4	True	False	2696.6098012910784	2730.607019010635	1784.07665739575	2111.865077958851	2982.6802036211366	2472.7426462003696	2871.6605087866747	2596.8384194432774	2428.4951749080656	2113.064555412764	1.2761606333244868	1.2922496911019554	0.844307691795649	0.9994323517230742	1.4115423951344934	1.1702163286333418	1.3590027344080489	1.2289441951933235	1.149276376193668	1.0	11.04512112782287														
ELIPQES(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	ELIPQESPR	9	0	Q96DF8	Q96DF8	DGCR14	Protein DGCR14	1	ELIPQES(1)PR;ELIPQES(1)PR;ELIPQES(1)PR;ELIPQES(1)PR	112.64	0.0038236	143839000.0	9058.8	8340.400000000001	9385.699999999999	8473.900000000001	7815.9	7477.3	7779.200000000001	8915.4	9025.7	10170.0	True	False	8660.585998700852	9718.509337439755	7415.769833179488	7731.006343578499	8843.827846541139	8922.182400441066	9523.883624639027	8601.840328703178	8606.09717702608	8328.114450685092	1.0399215872913958	1.166951942722195	0.89045003849214	0.9283021252118511	1.0619243886368086	1.0713328272892677	1.1435822215262146	1.0328676892757602	1.0333788311852654	1.0	13.023774179944617	-7.943976560301041	24.99976714641313	1.0640671845958776	1.0077814949422212	0.09112165756999757	0.07671184804505346	216.71481373903202	96704.93833808758	0.025465383374707044	0.028875026966858987	1.1376886873881035e-08	7.943976560301041	-0.05628568965365632	
ELISNSSDALDKIR	ddPTM_K562_Methotrexat_30min_R1	1	ELISNSSDALDKIR	14	1	P07900;P07900-2;G3V2J8	P07900	HSP90AA1	Heat shock protein HSP 90-alpha	0		133.23	0.00075724	8577100.0	1038.9	812.62	1223.8	1048.0	1095.1	694.4	614.17	1037.8	1332.0	1579.1	False	True	993.2311999437359	946.8916428217213	966.9411042165273	956.1234671249678	1239.12484483517	828.5829723116998	751.9132566002354	1001.2999857693598	1270.0756107336526	1293.1096882081456	0.7680950881437215	0.7322593368964883	0.747764178889118	0.7393985799069083	0.958251922582235	0.6407677398657977	0.581476779160287	0.7743349190716027	0.9821870660435534	1.0	10.336628941807238	-9.745028191921424	4.577647665453412	0.9991363429404356	0.7391573330049158	0.5437691988469024	0.09148281112394246	0.14962328931955443	7.3872470723910375	0.08099120877980293	0.024844873382438487	1.798754146476133e-10	9.745028191921424	-0.2599790099355198	
ELKTDSS(ph)PNQAR	ddPTM_K562_Methotrexat_30min_R1	2	ELKTDSSPNQAR	12	1	K7ES59;A0A087WU68;A6NLN1;P26599;P26599-2;P26599-3	K7ES59	PTBP1	Polypyrimidine tract-binding protein 1	1	ELKT(0.002)DS(0.076)S(0.923)PNQAR;ELKT(0.001)DS(0.023)S(0.976)PNQAR	214.61	2.0813000000000002e-17	93531000.0	6182.5	4711.9	8586.0	6247.9	4612.2	4038.9	4181.2	5420.700000000001	4930.4	6344.0	True	False	5910.724702716478	5490.46138639422	6783.915934632374	5700.156307490537	5218.785142314649	4819.360263349261	5118.940535188797	5230.050908517993	4701.186780151052	5195.040125383115	1.1377630509216872	1.0568660210279548	1.3058447617153073	1.0972304678917513	1.0045707090529514	0.9276848969465565	0.9853514913537447	1.0067392709757552	0.904937530160916	1.0	12.342919176903735	-7.716383383272187	3.2444029109296615	0.9676299418705028	1.161110183948166	0.6538571309197933	0.0648568857706621	0.15013219724691593	3.232301656778264	0.02022324985399349	0.025827546792474808	1.9213948253104862e-08	7.716383383272187	0.19348024207766312	
ELLHSVHPES(ph)PNLK	ddPTM_K562_Methotrexat_30min_R1	1	ELLHSVHPESPNLK	14	0	Q9Y217	Q9Y217	MTMR6	Myotubularin-related protein 6	1	ELLHSVHPES(1)PNLK	94.454	0.0062529	15338000.0	4129.2	2815.9	4092.6	3559.1	2786.1	3340.4	2811.5	3779.7	3961.9	4112.0	True	False	3947.6853121644745	3281.179612883867	3233.619188688152	3247.0792288592315	3152.5209845632967	3985.8850240639426	3442.050443576798	3646.765808645644	3777.7121337580024	3367.276953905323	1.1723672766464908	0.9744311673200503	0.9603068690081591	0.9643041761365403	0.9362226593529959	1.1837116692884933	1.022205922083348	1.0830014455496966	1.1218893442598068	1.0	11.717366670393634	-8.243968825739826	24.880400208414567	1.0836020440695708	0.9956632639376158	0.21215017526178248	0.07725851032911173	1174.757426329408	1673012.6366294273	0.025275160148490884	0.025227193434491858	5.702052009318345e-09	8.243968825739826	-0.087938780131955	
ELLT(ph)TMGDRFTDEEVDELYR	ddPTM_K562_Methotrexat_30min_R1	1	ELLTTMGDRFTDEEVDELYR	20	1	J3QRS3;P19105;O14950	J3QRS3	MYL12A;MYL12B	Myosin regulatory light chain 12A;Myosin regulatory light chain 12B	1	ELLT(0.515)T(0.455)MGDRFT(0.03)DEEVDELYR	60.56399999999999	0.024529	19082000.0	820.5	747.48	1055.7	821.3	785.74	667.32	759.81	1122.3	788.04	903.56	True	False	784.4318024389601	870.9883650124057	834.1229969941064	749.2979041505114	889.0785823950198	796.2701455688989	930.2167339619733	1082.8280728743039	751.404192404315	739.9165283245842	1.0601625621408581	1.177144085407325	1.1273204004279196	1.0126789650816015	1.201593082949759	1.0761621278712585	1.2571914511334026	1.4634462556556005	1.0155256216613282	1.0	9.531218715969576	-8.762140089739978	24.99928930842402	1.222661360401112	1.1129054607056157	0.03991476628382107	0.13342793097236783	38.87673586883975	1386914.142459765	0.05143622825203228	0.03702466803638996	1.7292584648500369e-09	8.762140089739978	-0.10975589969549637	
ELLTTMGDRFTDEEVDELYR	ddPTM_K562_Methotrexat_30min_R1	1	ELLTTMGDRFTDEEVDELYR	20	1	J3QRS3;P19105;O14950	J3QRS3	MYL12A;MYL12B	Myosin regulatory light chain 12A;Myosin regulatory light chain 12B	0		107.63	0.00059266	12272000.0	1019.0	724.6	1050.4	809.91	743.09	821.72	810.11	1113.3	1198.4	1111.2	False	True	974.2059801161487	844.3278339059086	829.9353945653214	738.9064477663954	840.8193598288432	980.5057603801417	991.7977893814688	1074.1446079755524	1142.6866455729803	909.9509122518464	1.0706137737752148	0.9278828369065085	0.9120661163045473	0.812028910370375	0.9240271629027504	1.0775369826859056	1.0899464751643324	1.180442366190257	1.2557673498509774	1.0	9.829644910293785	-8.46430745825921	2.2156344317825822	1.1494729616638528	0.9211132278949262	0.5603731893896887	0.08512759098082924	0.22578544407271262	2.201356219859857	0.03696504696203675	0.02975461165769159	3.433148125352756e-09	8.46430745825921	-0.2283597337689266	
ELNFSHLPS(ph)NSVSPGDCLLTTTLGK	ddPTM_K562_Methotrexat_30min_R1	1	ELNFSHLPSNSVSPGDCLLTTTLGK	25	0	H0YNU5;A0A3B3IT82;P54132	H0YNU5	BLM	Bloom syndrome protein	1	ELNFS(0.01)HLPS(0.63)NS(0.174)VS(0.174)PGDCLLT(0.007)T(0.003)T(0.001)LGK	54.537	0.011236	6071200.0	499.84	506.08	749.72	734.17	547.91	513.12	505.88	570.77	806.14	1176.2	True	False	477.8676320915168	589.7011181108231	592.3640175300011	669.8064559724597	619.9697687276396	612.2731779271019	619.3364675072488	550.6956955844843	768.6627273549753	963.1787823889689	0.4961359623249418	0.612244713954547	0.6150094129573357	0.6954123867960849	0.6436705002885661	0.6356796776694799	0.6430129886905428	0.5717481589644196	0.7980478197915282	1.0	9.911659801474325	-15.999999999999984	0.1882611010146416	2.5936821994626422	0.5641224125293878	0.7895233362169383	0.06065085405711419	61.478784433562446	0.5997239952250103	36.55484786251986	0.170909708031145	1.0000000000000368e-16	15.999999999999984	-2.0295597869332545	
ELNMMKLFFDNLVY(ph)YIQT(ph)VR	ddPTM_K562_Methotrexat_30min_R1	1	ELNMMKLFFDNLVYYIQTVR	20	1	Q70CQ2-3;Q70CQ2-2;Q70CQ2	Q70CQ2-3	USP34	Ubiquitin carboxyl-terminal hydrolase 34	2	ELNMMKLFFDNLVY(0.501)Y(0.501)IQT(0.998)VR	51.044	0.019972999999999998	56871000.0	1227.9	1284.3	1093.2	812.68	1170.5	1085.0	1163.7	1397.0	1311.0	1231.4	True	False	1173.9229862459456	1496.508745632568	863.7522594619277	741.4336061670979	1324.4412664410243	1294.6608942370315	1424.6893477468675	1347.8667181728626	1250.0518961500152	1008.3815274900327	1.1641655010955654	1.4840699723620832	0.8565728704014418	0.7352709127988528	1.3134326942082104	1.2838998523302763	1.4128475273570993	1.3366634368321326	1.2396616380523406	1.0	9.977825879527481														
ELNSNHDGADET(ph)SEKEQQEAIEHIDEVQNEIDR	ddPTM_K562_Methotrexat_30min_R1	1	ELNSNHDGADETSEKEQQEAIEHIDEVQNEIDR	33	1	Q01105-2	Q01105-2	SET	Protein SET	1	ELNSNHDGADET(0.5)S(0.5)EKEQQEAIEHIDEVQNEIDR	84.48100000000001	2.9167e-06	25134000.0	454.3	254.13	752.43	400.17	496.6	328.15	231.49	419.1	392.18	483.11	True	False	434.3295159634607	296.1206630285795	594.5052255643421	365.08771740400624	561.9116043695967	391.56034326625036	283.4075252298036	404.3600154518585	373.94763740054344	395.6140975683849	1.0978615742791713	0.7485088748066991	1.5027402441379818	0.9228379869372527	1.4203528332871556	0.9897532612537049	0.7163736756898923	1.0221071947062295	0.9452333465844294	1.0	8.627950026715064	-8.51205043323203	24.94288341664059	0.912812618143683	1.1330548904829492	0.18515402243323476	0.21718633212688793	870.4247959232418	2005021.5303974769	0.07706368944906393	0.06385144534056475	3.0757396181761506e-09	8.51205043323203	0.2202422723392662	
ELNSNHDGADET(ph)SEKEQQEAIEHIDEVQNEIDRLNEQASEEILK	ddPTM_K562_Methotrexat_30min_R1	2	ELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILK	44	2	Q01105-2	Q01105-2	SET	Protein SET	1	ELNS(0.011)NHDGADET(0.523)S(0.463)EKEQQEAIEHIDEVQNEIDRLNEQAS(0.003)EEILK;ELNS(0.002)NHDGADET(0.498)S(0.498)EKEQQEAIEHIDEVQNEIDRLNEQAS(0.003)EEILK	51.312	9.3857e-05	76185000.0	841.81	624.8499999999999	1547.23	614.4200000000001	345.804	486.44	495.5	593.47	964.61	1224.5	True	False	804.8050403548331	728.0958418660045	1222.4875671489929	560.5547525485906	391.28328722799847	580.4376455231904	606.6284882775398	572.597323718002	919.7654916439858	1002.7311843523997	0.8026129564072603	0.7261126942374245	1.219157822381399	0.5590279441749059	0.39021753121271824	0.578856681213179	0.6049761867826245	0.5710377144476725	0.9172602847073155	1.0	9.969719179763734	-7.322355032152583	24.999884783885427	0.6253839372832796	0.8969806015612813	0.22803396866001846	0.20800714744427687	307.7248116683988	126289.90247458116	0.057838210674742534	0.08578795096721256	4.760416675623504e-08	7.322355032152583	0.2715966642780018	
ELPAS(ph)PRPEDAAVLS(ph)S(ph)AGLGADS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	ELPASPRPEDAAVLSSAGLGADSR	24	1	A0A0C4DH51	A0A0C4DH51	TTC21A		4	ELPAS(1)PRPEDAAVLS(1)S(1)AGLGADS(1)R	56.68	0.006071	11120000.0	2387.2	2275.8	2867.2	2887.1	2431.2	2584.3	2431.4	1723.3	1370.0	1632.4	True	False	2282.261546352571	2651.8372680141692	2265.413902606331	2633.992425511923	2750.9454139012546	3083.679399978579	2976.7033428819595	1662.690562224262	1306.3089990278565	1336.7565417205858	1.707312794156962	1.9837847695144977	1.6947094193310905	1.9704354108651827	2.0579255294763077	2.3068369622560203	2.22681038018377	1.2438245187744923	0.977222821252448	1.0	10.384521021570494	-9.39261562200832	4.428697007659384	1.0232212507290785	1.9925815303509595	0.8414020060356338	0.18445573060816378	0.09527758349417505	2.961583744014146	0.12234427257105172	0.05485463378521171	4.0493412536982324e-10	9.39261562200832	0.969360279621881	
ELPESGIQLGT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	3	ELPESGIQLGTPR	13	0	A0A087WW69;F8W8L6;A0A087WTA5;E7ERK9;Q9UI10-3;Q9UI10;Q9UI10-2	A0A087WW69	EIF2B4	Translation initiation factor eIF-2B subunit delta	1	ELPESGIQLGT(1)PR;ELPESGIQLGT(1)PR;ELPESGIQLGT(1)PR	167.92	0.00030741	120651000.0	1719.25	1730.3200000000002	1623.76	2115.25	1914.58	1571.13	1694.26	1689.63	1909.4900000000002	2088.17	True	False	1643.6738285718247	2016.2259695888395	1282.9549659933225	1929.8093166374883	2166.380828622518	1874.7286366475828	2074.240933499707	1630.2047552086	1820.718226681534	1709.982178218987	0.961222783201036	1.179091802985232	0.7502738814094367	1.1285552219307105	1.266902577241412	1.0963439622512239	1.213019036058089	0.9533460500193761	1.0647585979977188	1.0	10.739765573791347	-6.187707290061964	19.813884203214542	1.073916000175288	0.961203009684088	0.05370062414311749	0.1399902330489432	33132.07473130458	8897316.132784523	0.0354388738845583	115.24074516717873	6.49071753729723e-07	6.187707290061964	-0.1127129904912001	
ELPLTQPPSAHSSITSGSCPGT(ph)PEMR	ddPTM_K562_Methotrexat_30min_R1	1	ELPLTQPPSAHSSITSGSCPGTPEMR	26	0	Q9HCD6;Q9HCD6-2;J3KRP9;Q9HCD6-3;Q9HCD6-4	Q9HCD6	TANC2	Protein TANC2	1	ELPLTQPPSAHS(0.001)S(0.013)IT(0.068)S(0.068)GS(0.068)CPGT(0.783)PEMR	65.881	0.0094316	22714000.0	1283.4	1452.1	1930.1	1459.4	1414.4	1286.4	1143.2	1589.2	1653.7	1441.4	True	False	1226.983272699769	1692.034843520247	1524.9983863771192	1331.4566678646745	1600.4183915029357	1534.9785938677576	1399.591700905921	1533.306935232865	1576.8198479506316	1180.3484925484272	1.0395093317318982	1.433504472790968	1.2919899470406209	1.1280199672132403	1.3558863349311	1.3004452528707582	1.1857444727058002	1.2990290112730896	1.335893473753844	1.0	10.204997156320424	-12.383037084292166	4.607141191207998	0.999615097436164	1.2677848897578132	0.3398853983688723	0.10993952760432872	0.00041215207554631616	5.519312962457609e-05	0.10093900892683046	0.02444658113426324	4.1396432500510784e-13	12.383037084292166	0.2681697923216493	
ELPPAAAIGATSLVAAPHS(ph)SSSSPSKDSSR	ddPTM_K562_Methotrexat_30min_R1	1	ELPPAAAIGATSLVAAPHSSSSSPSKDSSR	30	1	Q14C86-4;Q14C86-2;Q14C86-6;F8W9S7;Q14C86-3;Q14C86-5;Q14C86;H0Y4E7;H0Y7I9;C9IZ08	Q14C86-4	GAPVD1	GTPase-activating protein and VPS9 domain-containing protein 1	1	ELPPAAAIGATSLVAAPHS(0.188)S(0.188)S(0.188)S(0.188)S(0.188)PS(0.053)KDS(0.005)S(0.001)R	141.15	5.8834e-23	28629000.0	1079.7	956.44	1715.9	837.62	939.78	917.17	718.44	978.74	1145.4	1621.3	True	False	1032.2376807962767	1114.4754532997076	1355.7560391609238	764.187155088946	1063.3775423972197	1094.4001219975837	879.5684583614853	944.3171594448866	1092.15060400475	1327.6668592817834	0.7774824486879769	0.839424020798859	1.0211567982455596	0.5755865259017927	0.8009370234431143	0.8243032612786705	0.6624918383797709	0.711260624488078	0.8226089220872481	1.0	10.374677472946209	-12.398579111277368	4.700009003120667	1.0003269814215645	0.7806151318372506	0.2535919325639323	0.11234482282411525	0.0003900792126432367	4.991488471202855e-05	0.11023383143586457	0.02669618049278224	3.994117976491783e-13	12.398579111277368	-0.2197118495843139	
ELPPAAAIGATSLVAAPHSSS(ph)SSPSKDSSR	ddPTM_K562_Methotrexat_30min_R1	1	ELPPAAAIGATSLVAAPHSSSSSPSKDSSR	30	1	Q14C86-4;Q14C86-2;Q14C86-6;F8W9S7;Q14C86-3;Q14C86-5;Q14C86;H0Y4E7;H0Y7I9;C9IZ08	Q14C86-4	GAPVD1	GTPase-activating protein and VPS9 domain-containing protein 1	1	ELPPAAAIGATSLVAAPHS(0.002)S(0.048)S(0.282)S(0.282)S(0.282)PS(0.086)KDS(0.016)S(0.003)R	200.95	9.0955e-45	25904000.0	2592.1	2143.7	3707.9	2533.3	2156.2	1921.2	1895.8	2460.5	2756.9	2930.3	True	False	2478.154387692904	2497.909988330247	2929.6624614515963	2311.2095222019875	2439.7780937207503	2292.4447096849626	2320.9814088326148	2373.9628203753246	2628.7323207444515	2399.5942748124435	1.0327389149511956	1.040971807004952	1.2208990879012593	0.9631667930123878	1.016746088840976	0.9553467991434278	0.9672391008742621	0.9893184215739461	1.0954903286514626	1.0	11.22857477916341														
ELPPAAAIGATSLVAAPHSSSSSPSKDSS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	ELPPAAAIGATSLVAAPHSSSSSPSKDSSR	30	1	Q14C86-4;Q14C86-2;Q14C86-6;F8W9S7;Q14C86-3;Q14C86-5;Q14C86;H0Y4E7;H0Y7I9;C9IZ08	Q14C86-4	GAPVD1	GTPase-activating protein and VPS9 domain-containing protein 1	1	ELPPAAAIGAT(0.004)S(0.004)LVAAPHS(0.111)S(0.111)S(0.111)S(0.111)S(0.111)PS(0.111)KDS(0.149)S(0.175)R	52.326	0.0054515	11710000.0	839.1	722.02	1013.2	502.48	654.55	514.82	493.27	874.01	779.84	1033.0	True	False	802.2141687099712	841.3215327584109	800.5431661972431	458.4283585505283	740.634797906	614.3016788673813	603.8983540114269	843.2705729064165	743.5854086145137	845.9136900253399	0.9483404491135974	0.9945713642880145	0.9463650673075906	0.5419327810344289	0.8755441679680274	0.7261990036465534	0.71390067465788	0.9968754293137824	0.8790322433394346	1.0	9.724366660064815	-12.103917998158442	15.279537550077649	0.9999999992219247	0.843049144360927	0.09844562354090047	0.13846913183478002	0.0	0.0	0.14100366035297765	0.03419841115091826	7.871944107350672e-13	12.103917998158442	-0.1569508548609977	
ELPPLS(ph)PSLSR	ddPTM_K562_Methotrexat_30min_R1	4	ELPPLSPSLSR	11	0	Q86UU1-3;Q86UU1-2;Q86UU1	Q86UU1-3	PHLDB1	Pleckstrin homology-like domain family B member 1	1	ELPPLS(0.716)PS(0.284)LSR;ELPPLS(0.788)PS(0.211)LSR;ELPPLS(0.909)PS(0.091)LSR;ELPPLS(0.891)PS(0.109)LSR	168.83	9.3909e-08	636909000.0	13994.9	12696.8	14524.600000000002	13880.099999999999	12396.800000000001	12268.699999999999	12252.3	14994.1	14605.099999999999	15242.100000000002	True	False	13379.700953020112	14794.73039130077	11476.084950403158	12663.253183245473	14027.196490231605	14639.452638825682	15000.190165333814	14466.749004263216	13926.112088833393	12481.607991031202	1.0719533062273903	1.1853224682213772	0.9194396233762049	1.0145530281310544	1.1238292774705794	1.1728819435240254	1.201783470215726	1.1590452940565399	1.115730609296507	1.0	13.607516186445837	-7.889064133488749	5.705086850648616	1.1446561049354111	1.0489514173393344	0.1881634692580868	0.07948266308991314	0.31671129296655487	14.713432355086871	0.025357461062847173	0.028918369890948446	1.2910286097067007e-08	7.889064133488749	-0.09570468759607675	
ELPPLS(ph)PSLSRR	ddPTM_K562_Methotrexat_30min_R1	1	ELPPLSPSLSRR	12	1	Q86UU1-3;Q86UU1-2;Q86UU1	Q86UU1-3	PHLDB1	Pleckstrin homology-like domain family B member 1	1	ELPPLS(0.999)PS(0.001)LSRR	127.3	0.00023371	25233000.0	2241.2	2236.4	3132.4	3158.6	1935.0	1839.5	2438.0	2647.2	2342.6	2911.0	True	False	2142.6795315371073	2605.927087699661	2474.952046778763	2881.690442042867	2189.486416542829	2194.9573409668383	2984.7835608892897	2554.096475552757	2233.6930373158084	2383.789691833265	0.8988542650712066	1.0931866584654792	1.0382426164765355	1.2088694115573126	0.9184897577348755	0.9207848110454726	1.2521169846127775	1.071443711793433	0.9370344393082664	1.0	11.21904124532252														
ELPPLSPS(ph)LSR	ddPTM_K562_Methotrexat_30min_R1	1	ELPPLSPSLSR	11	0	Q86UU1-3;Q86UU1-2;Q86UU1	Q86UU1-3	PHLDB1	Pleckstrin homology-like domain family B member 1	1	ELPPLS(0.407)PS(0.578)LS(0.015)R	136.27	9.552200000000001e-05	10927000.0	1123.0	1090.5	1625.0	1339.2	1253.6	1040.5	1160.6	1516.4	1323.0	1694.0	True	False	1073.6342646422327	1270.686589669326	1283.9347069389257	1221.7944152421344	1418.4703730119343	1241.5618990356045	1420.8940938343349	1463.0673524962983	1261.4940187692373	1387.2001848043806	0.773957700123601	0.9160080885142867	0.9255583447892799	0.8807628694300014	1.022541943513339	0.8950127837610449	1.0242891468722704	1.054690857543835	0.909381380270743	1.0	10.437960280531954	-4.619100096435283	0.45367193388499966	0.9914597476976339	9.316312536275683e-15	0.5447546597355271	0.05460469220156227	15.565360276525974	0.7630028974078208	0.033929306811791814	11.390569049026048	2.4038087049794764e-05	4.619100096435283	-0.9914597476976246	
ELPPLSPSLS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	ELPPLSPSLSR	11	0	Q86UU1-3;Q86UU1-2;Q86UU1	Q86UU1-3	PHLDB1	Pleckstrin homology-like domain family B member 1	1	ELPPLS(0.142)PS(0.001)LS(0.857)R	109.16	0.002839	5709500.0	937.69	742.97	915.91	1021.0	798.86	619.67	721.52	999.1	1139.9	1008.0	True	False	896.4702703583033	865.7331641692973	723.6730076507268	931.4905152047636	903.9240923614501	739.4124574487203	883.3392267649058	963.9610867047292	1086.9062978042734	825.4414322802924	1.086049518839626	1.0488123449021678	0.8767103023306827	1.1284755995728362	1.0950796228683948	0.895778220637755	1.070141614196261	1.1678128199135516	1.3167576224053608	1.0	9.689022044699671	-9.190553833657127	3.9334664287351924	1.1830176529173102	1.0223668777220012	0.2513251134198161	0.10519406526469148	0.28011071761328593	8.418777726719581	0.05348109063011092	0.028547177495604956	6.448313838232137e-10	9.190553833657127	-0.16065077519530901	
ELQEAAAVPT(ph)TPRR	ddPTM_K562_Methotrexat_30min_R1	2	ELQEAAAVPTTPRR	14	1	Q96T58	Q96T58	SPEN	Msx2-interacting protein	1	ELQEAAAVPT(0.737)T(0.263)PRR;ELQEAAAVPT(0.5)T(0.5)PRR	97.2	0.027431	16571800.0	3532.7	3306.2	4134.4	3333.96	3382.6000000000004	3184.1000000000004	3119.7	3886.1800000000003	3836.7	3776.0	True	False	3377.406737935543	3852.493354208828	3266.64593991895	3041.676903106829	3827.4711899730114	3799.382261142976	3819.3721390099704	3749.500846692208	3658.332654430787	3092.1298098118887	1.0922590401018801	1.2459028537495962	1.0564388110593836	0.9836834448072123	1.2378106435983869	1.2287266366007168	1.235191396845763	1.2125949029676444	1.1831109556986366	1.0	11.594385170561596	-7.802824406292867	24.999900161964955	1.19844084256978	1.102656022645412	0.1744185903082025	0.0897498036031995	234.63769271260256	141738.84537290977	0.027763476882958056	0.0314810994862133	1.574619385026325e-08	7.802824406292867	-0.09578481992436783	
ELQEAAAVPTT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	ELQEAAAVPTTPR	13	0	Q96T58	Q96T58	SPEN	Msx2-interacting protein	1	ELQEAAAVPT(0.011)T(0.989)PR;ELQEAAAVPT(0.012)T(0.988)PR	155.37	2.5029e-07	30619000.0	5799.299999999999	5218.4	7065.299999999999	5529.9	5750.299999999999	5736.2	5749.299999999999	6732.9	6590.9	7773.6	True	False	5544.369715885749	6080.651902366263	5582.390083037286	5045.102252723627	6506.565240850772	6844.639466840977	7038.726877202945	6496.100090755955	6284.490497585909	6365.725712275876	0.8709721352262797	0.9552173903189284	0.8769448033665699	0.7925415703969911	1.0221246618124462	1.0752331746939	1.1057226144113046	1.0204806779891036	0.9872386561467281	1.0	12.636109279828736	-7.874729517867135	7.12319620873841	1.0436450756162263	0.8804612750227547	0.721417759887601	0.04898359918414364	0.12505590927498242	7.341299679821575	0.01614988710397348	0.01837009050019413	1.3343522188323682e-08	7.874729517867135	-0.1631838005934716	
ELQMQET(ph)HTET(ph)KR	ddPTM_K562_Methotrexat_30min_R1	1	ELQMQETHTETKR	13	1	Q8N4C9-2;Q8N4C9	Q8N4C9-2	C17orf78	Uncharacterized protein C17orf78	2	ELQMQET(0.999)HT(0.031)ET(0.97)KR	107.99	0.00076188	0.0	0.0	0.0	70.367	188.48	0.0	56.16	151.3	123.95	119.56	117.18	True	False	0.0	0.0	55.59792832195163	171.95625103407815	0.0	67.01212518004759	185.23287644075035	119.59060824447117	114.00168169618287	95.95756650258404	0.0	0.0	0.5794011910509884	1.7920030415678323	0.0	0.6983516529490462	1.9303623798730056	1.2462863805664632	1.188042651051524	1.0	6.584324666032979	-6.956873324558468	4.161753956436966	1.1088670202370863	0.020484988814683247	0.43748232978949886	0.5093270056827339	0.2033063400317283	7.645118008210684	0.14362001723002585	0.31071035109237766	1.1044007056104435e-07	6.956873324558468	-1.088382031422403	
ELRSKNQNAPDSRPEENFFS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	ELRSKNQNAPDSRPEENFFSR	21	3	Q9HAU5	Q9HAU5	UPF2	Regulator of nonsense transcripts 2	1	ELRSKNQNAPDS(0.001)RPEENFFS(0.999)R	64.069	0.014135	29452000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
ELS(ph)PAALEK	ddPTM_K562_Methotrexat_30min_R1	4	ELSPAALEK	9	0	O75683	O75683	SURF6	Surfeit locus protein 6	1	ELS(1)PAALEK;ELS(1)PAALEK;ELS(1)PAALEK;ELS(1)PAALEK	128.88	0.0015883	486117000.0	22778.3	15511.3	31453.2	23322.3	16168.6	15129.800000000001	13578.5	19049.5	18113.6	24807.0	True	False	21776.993205966308	18074.278677980587	24851.6031534101	21277.670169206725	18295.054302074634	18053.41972131561	16623.824274624774	18379.51828764061	17271.50268962845	20314.211915255168	1.0720077794212952	0.889735656661508	1.22336043638235	1.047427793801247	0.9006036945167325	0.8887088407184631	0.8183346882455697	0.904761571077159	0.8502177077643971	1.0	14.310201776212615	-7.770401097355089	5.006389331000707	0.8836377687320915	1.059240666602791	0.4618765223712291	0.08675540108929082	0.1597371663239034	10.89357680151361	0.026488023807228388	0.03199883462877625	1.696675945259216e-08	7.770401097355089	0.17560289787069938	
ELS(ph)PAGSISK	ddPTM_K562_Methotrexat_30min_R1	4	ELSPAGSISK	10	0	O95453;O95453-3;O95453-2;A0A494C0W0;A0A494C0K5;A0A494C0Q6;O95453-4	O95453	PARN	Poly(A)-specific ribonuclease PARN	1	ELS(1)PAGSISK;ELS(0.998)PAGS(0.002)ISK;ELS(0.985)PAGS(0.015)ISK;ELS(1)PAGSISK	123.67	0.0030258000000000004	458764000.0	18146.8	13288.5	27769.5	20496.2	13982.5	12598.400000000001	12109.5	16957.6	17551.6	22964.199999999997	True	False	17349.088400364803	15484.198759120445	21941.061442671064	18699.32996840341	15821.443834268806	15032.862497655125	14825.363630266127	16361.191596340823	16735.629946961548	18805.16085235227	0.9225705930717772	0.8234015587898352	1.16675744573206	0.9943722425572541	0.8413352035906547	0.7994008993427312	0.7883667545662963	0.8700373118209335	0.8899487793994673	1.0	14.198841026257286	-7.762814046198815	24.98171587569485	0.8512535774972223	0.9793903366881025	0.2360892762315323	0.09675192631952134	49.681522262967	902862.7410328742	0.030344171554575094	0.036313300552723936	1.7265770099058323e-08	7.762814046198815	0.1281367591908802	
ELSDIAHR	ddPTM_K562_Methotrexat_30min_R1	4	ELSDIAHR	8	0	H3BMQ8;H3BUH7;H3BR04;H3BPS8;H3BQN4;J3KPS3;P04075;P04075-2	H3BMQ8	ALDOA	Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A	0	;;;	136.27	8.5766e-06	192110000.0	44674.2	40147.1	55625.0	50854.0	42446.600000000006	39908.3	40923.4	44670.4	45433.0	48572.0	False	True	42710.3756593767	46780.72589097971	43950.07266060168	46395.708775928564	48029.07190099583	47620.01416173248	50101.5141819921	43099.31671257624	43320.829746593154	39775.14012769678	1.0737957307568609	1.176129756948479	1.1049633645413044	1.1664499138652098	1.2075148383336947	1.197230581937612	1.2596187975992752	1.083574226871541	1.0891433595837263	1.0	15.279579392724933	-11.85490353246843	6.517126438057318	0.9999999943207445	1.1550218585709078	0.370358837127273	0.05882349028820572	4.757042655978466e-09	8.857650793769006e-10	0.0595993080405859	0.01445495488886748	1.3966785634099631e-12	11.85490353246843	0.1550218642501633	
ELSDQATAS(ph)PIVAR	ddPTM_K562_Methotrexat_30min_R1	4	ELSDQATASPIVAR	14	0	Q5JSH3-4;Q5JSH3-2;Q5JSH3	Q5JSH3-4	WDR44	WD repeat-containing protein 44	1	ELSDQAT(0.004)AS(0.996)PIVAR;ELS(0.001)DQAT(0.033)AS(0.967)PIVAR;ELSDQAT(0.068)AS(0.932)PIVAR;ELSDQAT(0.001)AS(0.999)PIVAR	196.45	7.4133000000000004e-09	93315800.0	5125.84	4414.25	4463.3099999999995	4628.01	4456.33	3969.96	4345.18	4916.58	5141.29	5259.9	True	False	4900.514211107518	5143.629783079157	3526.522225740048	4222.279548749066	5042.4155052363385	4737.098584041697	5319.697224407267	4743.661094655925	4902.272550081701	4307.281140526898	1.1377279660245379	1.1941708969686504	0.8187350931331727	0.9802656039843655	1.1706724824141648	1.099788574158923	1.2350475975098583	1.1013121595484352	1.1381361908226915	1.0	12.072561777456324	-7.765305243389221	24.990910006699597	1.133550970142748	1.0289717604316884	0.14230260895062874	0.10835410957588007	186.25806192462284	1204067.952012947	0.03468091774011099	0.04082860906861265	1.716701381396597e-08	7.765305243389221	-0.1045792097110596	
ELSESVQQQSTPVPLIS(ph)PKR	ddPTM_K562_Methotrexat_30min_R1	3	ELSESVQQQSTPVPLISPKR	20	1	Q9ULU4-9;Q9ULU4-11;Q9ULU4-23;Q9ULU4;Q9ULU4-21;A0A087WV57;H7C4X9;A0A087WYS3;A0A087WVZ6;Q9ULU4-10;Q9ULU4-13;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-19;Q9ULU4-16;Q9ULU4-22;Q9ULU4-14;Q9ULU4-6;Q9ULU4-3;Q9ULU4-4;Q9ULU4-18;Q9ULU4-8;Q9ULU4-15;Q9ULU4-17;Q9ULU4-2	Q9ULU4-9	ZMYND8	Protein kinase C-binding protein 1	1	ELSESVQQQSTPVPLIS(1)PKR;ELSESVQQQSTPVPLIS(1)PKR;ELSESVQQQSTPVPLIS(1)PKR	168.12	7.1091e-13	83909000.0	6009.29	3820.33	7706.1	6163.1	4682.88	4573.639999999999	4367.469999999999	5442.620000000001	5820.23	7190.1	True	False	5745.128806920677	4451.574597993043	6088.694920087415	5622.7905918300485	5298.760801188677	5457.431200293324	5346.986324313839	5251.1999696936155	5549.64877767292	5887.90321650648	0.9757512302196916	0.7560543090302925	1.0341024123864713	0.9549733385675906	0.8999402005002106	0.9268887411385522	0.9081308112069159	0.8918624808526243	0.9425509512647425	1.0	12.523538241686476	-10.020905354002931	17.179729534591274	1.0000000036455512	0.9174252545280264	0.11805841085883018	0.06752854659488068	49.862421061722365	40979.44455809645	0.0627477277442481	0.01620138623248884	9.530038299593788e-11	10.020905354002931	-0.08257474911752483	
ELSNS(ph)PLR	ddPTM_K562_Methotrexat_30min_R1	1	ELSNSPLR	8	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	ELS(0.015)NS(0.985)PLR	104.43	0.01408	27527000.0	2428.5	2169.6	2643.6	2310.3	2420.1	2019.6	1618.0	2644.9	2671.9	2988.0	True	False	2321.746047803796	2528.0895231055215	2088.7444869315345	2107.7595859721496	2738.3855693412424	2409.859117051711	1980.8776872513813	2551.877367856408	2547.683952191629	2446.844245688011	0.9488736571178688	1.0332041067022089	0.8536483229827385	0.861419597788695	1.119149931250019	0.9848845594886239	0.809564274776465	1.0429259534412512	1.0412121477210183	1.0	11.256706553988993														
ELSNS(ph)PLRENSFGSPLEFR	ddPTM_K562_Methotrexat_30min_R1	2	ELSNSPLRENSFGSPLEFR	19	1	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	ELS(0.18)NS(0.809)PLRENS(0.009)FGS(0.001)PLEFR;ELS(0.002)NS(0.998)PLRENS(0.001)FGSPLEFR	122.46	0.00015262	1192120000.0	2799.0	2205.74	2942.4	2719.85	2651.0	1973.1999999999998	2253.54	3235.9	2908.9	3241.1000000000004	True	False	2675.959311427969	2570.2010438305556	2324.8304502751357	2481.4049733395464	2999.652966540075	2354.492973740562	2758.953710338987	3122.0915628744183	2773.6658739212658	2654.1053830988662	1.0082340092704183	0.9683869601400883	0.8759375061289851	0.9349308392729759	1.1301936184002446	0.8871135971969265	1.0395042065427345	1.1763253948979009	1.045047378896012	1.0	11.374009939716744	-8.99322926104816	24.2176623937622	1.087994799221365	0.9687689920579295	0.2741149358016155	0.0783809365412068	132.33964284139077	473351.37479013513	0.03272103275581619	0.02199297827692828	1.0157123638010587e-09	8.99322926104816	-0.11922580716343545	
ELSS(ph)PISPK	ddPTM_K562_Methotrexat_30min_R1	1	ELSSPISPK	9	0	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	ELS(0.053)S(0.556)PIS(0.391)PK	91.584	0.012811000000000001	21917000.0	1950.5	1452.4	2747.4	2298.5	1700.1	1348.7	1062.4	1743.8	1718.7	2260.2	True	False	1864.7583554627565	1692.3844134211188	2170.758285442463	2096.9940736514686	1923.6929492322818	1609.3171871497548	1300.6702440889167	1682.469565604751	1638.798012138086	1850.8558782142038	1.0075113775265778	0.9143793600255974	1.1728402578470436	1.1329861489133075	1.03935318350576	0.8694989199820911	0.702739883422942	0.9090224611265141	0.8854271320786351	1.0	10.853976844980942	-8.25514562959508	5.1162305589165955	0.8559228391993511	1.0579784248365907	0.4700591935854813	0.09488214484608128	0.1589855117919447	13.494860760879675	0.03425523974557979	0.03236277316624019	5.557178801841304e-09	8.25514562959508	0.20205558563723958	
ELSSEPQT(ph)PPAQK	ddPTM_K562_Methotrexat_30min_R1	4	ELSSEPQTPPAQK	13	0	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	ELS(0.001)S(0.005)EPQT(0.994)PPAQK;ELSSEPQT(1)PPAQK;ELSSEPQT(1)PPAQK;ELS(0.005)S(0.041)EPQT(0.955)PPAQK	201.3	6.6258e-11	133580000.0	15322.3	12385.1	24992.6	16458.800000000003	12732.5	12304.7	11284.8	16905.1	15958.599999999999	20946.5	True	False	14648.750038403994	14431.527264294884	19746.994804087262	15015.882557935514	14407.046924357406	14682.409129325717	13815.703661986641	16310.538051098105	15216.688169259825	17152.885874265034	0.8540108146106151	0.8413468946322856	1.1512345472847951	0.8754143569779284	0.8399197097190924	0.8559731136178172	0.8054448541930042	0.9508917724200143	0.8871211690442049	1.0	14.066163701500543	-3.1424550966919034	24.356250945826154	0.9028971374931136	0.05043785026136094	0.0	0.09810778628807766	0.0	0.0	0.022831724725100914	0.0	0.0007203522272614262	3.1424550966919034	-0.8524592872317527	
ELSSPIS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	ELSSPISPK	9	0	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	ELS(0.002)S(0.018)PIS(0.98)PK;ELS(0.01)S(0.079)PIS(0.911)PK	104.07	0.006819199999999999	52966000.0	9220.2	7643.900000000001	13617.0	8940.1	6894.299999999999	6735.9	6261.2	8996.1	9483.8	10948.2	True	False	8814.891047955754	8906.924550915515	10758.977787315293	8156.335313400692	7801.021292801666	8037.517343309882	7665.433482953244	8679.702063961982	9042.900208014882	8965.37488977292	0.9832149972904282	0.9934804356118916	1.2000588842735835	0.9097595375186012	0.8701277290368005	0.896506553504921	0.855004233196923	0.9681359865791208	1.0086471920243287	1.0	13.13014819573211														
ELST(ph)SPCNPIVR	ddPTM_K562_Methotrexat_30min_R1	2	ELSTSPCNPIVR	12	0	H3BSS6;Q9H2Y7;H3BNX5	H3BSS6	ZNF106	Zinc finger protein 106	1	ELS(0.002)T(0.499)S(0.499)PCNPIVR;ELS(0.01)T(0.495)S(0.495)PCNPIVR	214.0	3.4328000000000004e-17	660270000.0	5112.6	4293.1	6542.0	5404.6	3984.3	4083.6	4833.299999999999	5011.8	4763.4	5445.5	True	False	4887.856225654389	5002.461804777057	5168.923601719662	4930.787109182827	4508.305286527957	4872.697905720127	5917.290559822068	4835.532153284717	4541.950573700212	4459.267182026125	1.0961119901843446	1.1218125312025204	1.1591419376156544	1.1057393306813388	1.0109968975843135	1.0927127052086962	1.3269647945009366	1.0843782074272643	1.0185419236612143	1.0	12.122590927605264	-9.672735642603772	4.29862294853761	1.008336566799218	1.1289997535829597	0.2823131675352677	0.07594382153399021	0.2957063513846382	9.599359099139269	0.06258031605003245	0.020748025720352597	2.1245372858037818e-10	9.672735642603772	0.12066318678374177	
ELSVQDQPSLS(ph)PTSLQNSSSHTTTAK	ddPTM_K562_Methotrexat_30min_R1	1	ELSVQDQPSLSPTSLQNSSSHTTTAK	26	0	O95628-3;O95628-2;O95628;O95628-8;O95628-4;O95628-7;O95628-9;O95628-10;O95628-6	O95628-3	CNOT4	CCR4-NOT transcription complex subunit 4	1	ELSVQDQPS(0.047)LS(0.822)PT(0.101)S(0.03)LQNSSSHTTTAK	114.34	9.477299999999999e-09	16664000.0	1691.6	1219.7	2391.1	1406.8	1315.0	1102.9	984.84	1694.5	1794.8	2230.0	True	False	1617.2392894646491	1421.2346936448203	1889.240786314871	1283.4680281979051	1487.9455492267805	1316.019815902324	1205.7154397482389	1634.9034745482568	1711.3601397483199	1826.1253908581864	0.8856123996527032	0.7782788086512021	1.0345624653009307	0.7028367463828649	0.8148101749614912	0.7206623501816933	0.6602588440992071	0.8952854402730445	0.9371536852373907	1.0	10.834570116007422	-9.50568663215616	13.421545151666772	0.9511668737270074	0.7999172005970344	0.3171996854380914	0.1004408048894212	2.3821348305455357	1865.1895372977706	0.05973130511027449	0.02695510023102296	3.121140850088903e-10	9.50568663215616	-0.15124967312997295	
ELSVQDQPSLSPT(ph)SLQNSSSHTTTAK	ddPTM_K562_Methotrexat_30min_R1	2	ELSVQDQPSLSPTSLQNSSSHTTTAK	26	0	O95628-3;O95628-2;O95628;O95628-8;O95628-4;O95628-7;O95628-9;O95628-10;O95628-6	O95628-3	CNOT4	CCR4-NOT transcription complex subunit 4	1	ELSVQDQPS(0.007)LS(0.273)PT(0.681)S(0.037)LQNSSSHTTTAK;ELSVQDQPS(0.002)LS(0.407)PT(0.585)S(0.007)LQNSSSHTTTAK	165.32	1.1632999999999998e-25	51305000.0	3545.3	2720.7	5036.8	3479.0	2800.3999999999996	2272.8	2438.6	3636.3999999999996	3937.8	4178.8	True	False	3389.4528570223556	3170.249431007187	3979.644511944601	3174.001471495958	3168.7016852126817	2711.9864335685943	2985.518126162682	3508.5057508688606	3754.7325374977318	3421.978826600088	0.9904949822234732	0.9264374771590838	1.1629658491775599	0.9275339306086507	0.9259851816093643	0.7925199339304775	0.8724537109801314	1.0252856398748504	1.0972401431332794	1.0	11.740615117881127	-9.463662246510552	8.116229617683333	1.0528664366500908	0.9436853959542653	0.19703407423078256	0.09156356510958638	0.533285629374017	68.10153059015735	0.055234647792097545	0.026165026748153866	3.4382523895228247e-10	9.463662246510552	-0.10918104069582557	
ELTPAS(ph)PTCTNSVSK	ddPTM_K562_Methotrexat_30min_R1	2	ELTPASPTCTNSVSK	15	0	A0A494C0S2;A0A090HNM7;A0A1W2PS85;R4GMW8;P28715	A0A494C0S2	ERCC5-201;BIVM-ERCC5;ERCC5	DNA repair protein complementing XP-G cells	1	ELT(0.002)PAS(0.993)PT(0.002)CT(0.003)NSVSK;ELT(0.006)PAS(0.975)PT(0.013)CT(0.003)NS(0.004)VSK	193.32	1.4918e-08	43475000.0	5156.7	3857.1	6842.6	5213.5	3879.8	3977.7	3514.2	4565.2	5281.6	5514.4	True	False	4930.017642458238	4494.420215509912	5406.431769661717	4756.4405494809325	4390.061704859368	4746.334229499206	4302.348806266255	4404.639328420007	5036.059568806956	4515.688724371472	1.0917532060725543	0.9952900852650068	1.197255191767946	1.0533145306960834	0.9721798761650494	1.0510764844979072	0.952755840553445	0.975408093265569	1.1152362078517521	1.0	12.140730326290466	-7.525346345457242	24.689074138170266	1.0093047289327175	1.0915629340812254	0.2648836023750296	0.06262371763711642	87.69402745869232	877396.9123635775	0.018110063246293155	0.023528123995324977	2.983002755555541e-08	7.525346345457242	0.0822582051485079	
ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(ph)SPQRDDLK	ddPTM_K562_Methotrexat_30min_R1	1	ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSSPQRDDLK	42	2	O00139-1;O00139-5;O00139;O00139-4;H0Y8H2;O00139-2	O00139-1	KIF2A	Kinesin-like protein KIF2A	1	ELTVDPTAAGDVRPIMHHPPNQIDDLET(0.023)QWGVGS(0.489)S(0.489)PQRDDLK	57.184	0.00013979	33746000.0	2120.6	1334.9	2173.3	1777.3	1638.1	1335.5	1264.4	2519.5	2226.0	2982.1	True	False	2027.3809631347453	1555.4695355796264	1717.1540299017634	1621.486868436265	1853.538862500678	1593.566473966411	1547.9738861314258	2430.887756933806	2122.513745865701	2442.012792860179	0.8302089854165747	0.636962074943842	0.7031715947280385	0.6639960581603331	0.7590209469499716	0.6525627050872099	0.6338926195052318	0.9954443170982151	0.8691656948200224	1.0	11.253855042787402	-9.263394199098183	24.999909854363903	0.9492287678163981	0.6944291640972542	0.7623176450557453	0.06592003386232861	79.85432446780739	1021226.7861899795	0.03223951295830888	0.016710012436855867	5.452627140019175e-10	9.263394199098183	-0.2547996037191439	
ELVGPPLAETVFT(ph)PKT(ph)SPENVQDR	ddPTM_K562_Methotrexat_30min_R1	3	ELVGPPLAETVFTPKTSPENVQDR	24	1	P49792	P49792	RANBP2	E3 SUMO-protein ligase RanBP2	2	ELVGPPLAET(0.036)VFT(0.934)PKT(0.534)S(0.496)PENVQDR;ELVGPPLAET(0.245)VFT(0.658)PKT(0.548)S(0.548)PENVQDR;ELVGPPLAET(0.062)VFT(0.816)PKT(0.561)S(0.561)PENVQDR	62.325	0.0069873999999999995	23640000.0	5588.1	4305.3	6491.27	5510.139999999999	4773.66	4172.85	3913.26	6131.83	6342.18	8054.46	True	False	5342.453815002011	5016.677647412518	5128.841135453194	5027.0745812442465	5401.479962374079	4979.194205084787	4790.908169600333	5916.170063345668	6047.333436098173	6595.719244686828	0.809988056921255	0.7605959958731864	0.7776014935118296	0.7621723112750439	0.8189372170025633	0.7549130004427903	0.7263662978771637	0.8969711784065748	0.9168573148363757	1.0	12.687314274565649	-9.582622546793182	2.082768831597796	0.9755568387766842	0.7735590988176972	0.8458664852228934	0.0327112042233947	0.11616216575211404	0.9189529385756813	0.028173551501037803	0.008858498753168655	2.614432618039035e-10	9.582622546793182	-0.20199773995898695	
ELVLERVPAELNGS(ph)MY(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	ELVLERVPAELNGSMYR	17	1	Q96ID5	Q96ID5	IGSF21	Immunoglobulin superfamily member 21	2	ELVLERVPAELNGS(1)MY(1)R	51.818999999999996	0.033378	22870000.0	5990.0	4250.8	7243.4	6212.3	4435.4	4699.8	4179.2	5702.3	5945.5	7037.8	True	False	5726.686772223481	4953.172448754123	5723.10932691779	5667.677304217974	5018.73284337678	5607.969834778983	5116.491984277485	5501.74687690559	5669.095002715419	5763.186222323654	0.9936667932126169	0.8594503557022071	0.9930460523294169	0.9834277577677905	0.8708260760231484	0.9730676085142899	0.8877887659535963	0.9546363182911944	0.9836737499052566	1.0	12.492650922065364	-9.741599974489796	3.1572964162641997	0.9966345635564722	0.9362837936311293	0.16948645457989542	0.047705645041341546	0.4122926092147584	7.813163107396626	0.04103270756284274	0.011858686164259238	1.8130092735121216e-10	9.741599974489796	-0.06035076992534283	
ELVLS(ph)SPEDLTQDFEEMKR	ddPTM_K562_Methotrexat_30min_R1	1	ELVLSSPEDLTQDFEEMKR	19	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	ELVLS(0.768)S(0.212)PEDLT(0.02)QDFEEMKR	50.132	0.026929	4979000.0	2294.8	1788.7	2707.6	1928.9	1495.8	1444.3	1508.0	1624.7	1945.4	2551.9	True	False	2193.9233397159364	2084.2522722985086	2139.3117615432834	1759.7963318104494	1692.5239182763655	1723.3905341442792	1846.2073871292225	1567.5583801112734	1854.9587786195568	2089.726181583411	1.0498616321366918	0.9973805614663092	1.023728266601082	0.8421181431899515	0.8099261679316855	0.8246968188140541	0.8834685632020597	0.7501262098001353	0.88765638051873	1.0	11.029098201919656	-7.261549288500523	24.992431305366107	0.8442581045682019	1.0210292039786224	0.5919175253962703	0.0628498049960802	5.963068462134234	1356077.3944019026	0.016233795981120763	0.025891818061799583	5.4758395160332554e-08	7.261549288500523	0.17677109941042046	
ELVLSS(ph)PEDLT(ph)QDFEEMKR	ddPTM_K562_Methotrexat_30min_R1	1	ELVLSSPEDLTQDFEEMKR	19	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	2	ELVLS(0.224)S(0.793)PEDLT(0.983)QDFEEMKR	46.543	0.033216	0.0	1076.8	762.67	1107.6	839.77	649.75	774.65	692.66	805.7	927.24	1386.1	True	False	1029.4651613239146	888.6882543265516	875.1298962495717	766.1486679270362	735.2035137719398	924.3401490513514	848.0066371146739	777.3630743248926	884.1328147872914	1135.063858416382	0.9069667346824024	0.782941195543334	0.7709961776692769	0.6749828762902832	0.6477199571816874	0.8143507893388238	0.747100377504571	0.6848628546850694	0.7789278182293775	1.0	10.148557750133369	-10.039118726598849	22.477882483976167	1.0000000015615889	0.7497389017107766	0.5149369961797012	0.07117706319337141	1638.050260797565	941233.6272264611	0.07159655716687913	0.018486151539895208	9.138633770874543e-11	10.039118726598849	-0.25026109985081224	
ELVLSSPEDLT(ph)QDFEEMKR	ddPTM_K562_Methotrexat_30min_R1	1	ELVLSSPEDLTQDFEEMKR	19	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	ELVLS(0.131)S(0.051)PEDLT(0.818)QDFEEMKR	49.924	0.033217	7331300.0	2359.2	1669.9	3224.0	2200.1	1676.7	1559.9	1566.7	2035.0	1860.0	2784.0	True	False	2255.4923928263183	1945.822591553239	2547.3264585668285	2007.2206488756112	1897.21543907874	1861.328598083268	1918.0723563762297	1963.4278965510193	1773.5290059794265	2279.790622488428	0.9893419029702	0.8535093408838318	1.117351055592281	0.8804407865686795	0.8321884564153084	0.8164471683156578	0.8413370672972691	0.8612316750421168	0.7779350386324473	1.0	11.154685617048484	-7.504287897579703	24.459296909691037	0.8463210467714419	0.9776590209280895	0.34715567161259464	0.08043426491485293	596.3698280691459	784621.9447376544	0.02148260980446812	0.03121540427874599	3.1312093303324724e-08	7.504287897579703	0.1313379741566476	
ELWDS(ph)IMTR	ddPTM_K562_Methotrexat_30min_R1	1	ELWDSIMTR	9	0	A0A499FI31;Q15020-4;Q15020	A0A499FI31	SART3	Squamous cell carcinoma antigen recognized by T-cells 3	1	ELWDS(1)IMTR	86.882	0.018000000000000002	29296000.0	5246.3	4865.7	5237.9	4980.9	4442.2	4063.6	4377.3	5139.4	4678.9	5089.2	True	False	5015.67893374225	5669.674222241209	4138.536370138707	4544.23223034614	5026.427162566697	4848.83318877567	5359.020952042936	4958.644388960349	4461.378960256522	4167.496564643718	1.2035232317392548	1.3604508448409274	0.9930509374019156	1.0903985545899615	1.2061022929712744	1.1634882269399545	1.2859089069221783	1.1898376668210324	1.0705177295420107	1.0	12.024965294629984	-9.913879430321618	3.408224764338403	1.0021304106843418	1.1859617818712975	0.3061388149088744	0.09392577347830511	0.27938021635434745	6.294064209336072	0.09406523879205071	0.025088667223260922	1.2193280641676848e-10	9.913879430321618	0.1838313711869557	
EMAS(ph)LQNTDVFICT(ph)S(ph)PIKMFK	ddPTM_K562_Methotrexat_30min_R1	1	EMASLQNTDVFICTSPIKMFK	21	1	Q2I378;Q9NPB1	Q2I378	NT5M	5(3)-deoxyribonucleotidase, mitochondrial	3	EMAS(0.66)LQNT(0.351)DVFICT(0.995)S(0.995)PIKMFK	41.257	0.033743	0.0	248.95	0.0	219.61	173.77	0.0	155.41	0.0	0.0	0.0	165.99	True	False	238.00645608431327	0.0	173.51686214821996	158.5358538953298	0.0	185.4407830169373	0.0	0.0	0.0	135.92760252401365	1.7509795778400923	0.0	1.2765388260089823	1.166325683316029	0.0	1.3642614124984394	0.0	0.0	0.0	1.0	7.086694640589011	-7.749982754415789	24.999538831069646	0.37285225863720417	0.989862287344898	0.21910100034563307	0.6003942029051604	369.92852802536436	807218.661800281	0.17520434621814937	0.2241869069306069	1.7783500258940554e-08	7.749982754415789	0.6170100287076938	
EMDES(ph)LANLSEDEYYSEEERNAK	ddPTM_K562_Methotrexat_30min_R1	1	EMDESLANLSEDEYYSEEERNAK	23	1	R4GMQ1;O60341;O60341-2	R4GMQ1	KDM1A	Lysine-specific histone demethylase 1A	1	EMDES(0.665)LANLS(0.335)EDEYYSEEERNAK	76.329	0.001811	6938500.0	1997.5	1133.5	3174.2	2840.9	1335.1	1523.2	1239.1	1715.1	1450.9	2670.0	True	False	1909.6922917389654	1320.7916087942976	2507.97879800956	2591.8427077817955	1510.6890515381554	1817.5368424901803	1516.9997171033283	1654.7789608720652	1383.4479756857795	2186.4371271710133	0.8734265751377345	0.6040839649037808	1.1470619332441463	1.1854183573690629	0.6909364247271108	0.8312778903648853	0.6938227028124716	0.7568381181914662	0.6327407994008017	1.0	11.094366147774672	-7.829935726595124	24.999999974627936	0.7549390046294184	0.9415348408120888	0.20694576448939062	0.17575089830079552	86.01792965017356	31393.610497732654	0.057004415610895955	0.06463695279476978	1.4793273049892598e-08	7.829935726595124	0.1865958361826704	
EMDRETLIDVAR	ddPTM_K562_Methotrexat_30min_R1	2	EMDRETLIDVAR	12	1	P40227;P40227-2	P40227	CCT6A	T-complex protein 1 subunit zeta	0	;	171.49	1.2239999999999999e-08	56973000.0	5807.299999999999	5348.299999999999	6215.200000000001	6102.9	4982.4	5208.5	5216.6	5906.200000000001	5697.0	7034.6	False	True	5552.018045464678	6232.015669443792	4910.714455733424	5567.86823236352	5637.672931154002	6214.968910261364	6386.555341975003	5698.475598333969	5432.147713475693	5760.565773332286	0.9637973532334185	1.0818409015124897	0.8524708594539226	0.9665488515275997	0.9786665325917814	1.078881685377619	1.1086680706851133	0.9892215144412109	0.9429885756400948	1.0	12.491994797422741	-8.055002036244172	11.521504059424984	1.0286233944884684	0.9670879036196731	0.14549174559989875	0.06704821892678946	2.160662670775402	449.77890426072287	0.02313558170741784	0.02316586663828024	8.810447421095062e-09	8.055002036244172	-0.061535490868795284	
EMEHNTVCAAGT(ph)SPVGEIGEEK	ddPTM_K562_Methotrexat_30min_R1	2	EMEHNTVCAAGTSPVGEIGEEK	22	0	P18583-6;P18583-2;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;H7C1M2	P18583-6	SON	Protein SON	1	EMEHNTVCAAGT(0.5)S(0.5)PVGEIGEEK;EMEHNTVCAAGT(0.827)S(0.173)PVGEIGEEK	97.689	0.0001284	60265000.0	5978.4	4122.6	8729.7	5985.5	4257.1	4123.4	3722.8	5155.2	5108.799999999999	6840.700000000001	True	False	5715.596694334037	4803.789577781535	6897.455268409068	5460.760508088258	4816.983268147021	4920.188692439605	4557.732666316096	4973.888694004825	4871.293003090157	5601.782942261706	1.0203174155881125	0.8575465396097651	1.231296417498147	0.9748254376103136	0.8599018058707887	0.8783254801466996	0.8136217902930603	0.887911714050925	0.8695968860805922	1.0	12.451670367647967	-7.619260289330394	4.969542116698444	0.8762275304037086	1.0309980056994306	0.3387631513810586	0.0950993089700816	0.22876720928990255	9.352224415766079	0.028038681740523656	0.03655649647044971	2.4029222049618192e-08	7.619260289330394	0.15477047529572197	
EMEHNTVCAAGTS(ph)PVGEIGEEK	ddPTM_K562_Methotrexat_30min_R1	2	EMEHNTVCAAGTSPVGEIGEEK	22	0	P18583-6;P18583-2;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;H7C1M2	P18583-6	SON	Protein SON	1	EMEHNTVCAAGT(0.477)S(0.523)PVGEIGEEK;EMEHNTVCAAGT(0.093)S(0.907)PVGEIGEEK	102.28	0.00047975	234713000.0	6726.0	4670.5	9608.8	6816.1	4352.700000000001	4179.0	3933.9	5796.3	5698.8	7437.0	True	False	6430.333093485004	5442.220740073902	7592.044192021385	6218.543095677949	4925.156343817045	4986.5326055452115	4816.177215005075	5592.440843625888	5433.864031868575	6090.087233996567	1.0558687989868338	0.8936195051023089	1.2466232256313958	1.0210926143987404	0.8087168795092864	0.8187949390460278	0.7908223691969187	0.9182858354486816	0.8922473230818811	1.0	12.572247178007634	-7.663916683112035	5.737464110270282	0.8612374058779901	1.0609624751025577	0.4565099422707768	0.09793904195261167	0.18387416036084558	8.960892799396829	0.029183084258149198	0.03771241633266998	2.168120006224895e-08	7.663916683112035	0.19972506922456756	
EMFPYEAS(ph)TPTGISASCR	ddPTM_K562_Methotrexat_30min_R1	1	EMFPYEASTPTGISASCR	18	0	G5E972;P42167;H0YJH7;P42167-2	G5E972	TMPO	Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin	1	EMFPYEAS(0.864)T(0.136)PT(0.001)GISASCR	115.66	0.00039176	23462000.0	1301.5	841.14	715.89	862.04	748.33	853.66	765.27	1135.6	1487.5	1304.8	True	False	1244.2876183720978	980.1240880646102	565.6344722156967	786.4662916034421	846.7485116751917	1018.6177133404457	936.9012779498541	1095.6603043357927	1418.3464496744061	1068.4880762294897	1.1645311221094523	0.9172999772943645	0.5293783663096394	0.7360552813829669	0.7924735245181409	0.9533262335832254	0.8768476680207956	1.0254305393862597	1.3274331096697929	1.0	10.061355093024277	-9.36384025160353	2.565801174249158	1.1670853629232247	0.8355018676139719	0.34684221731401665	0.17095850814797042	0.3308228576168359	4.1221952452016195	0.12700927622422348	0.05022617843728177	4.326729537106475e-10	9.36384025160353	-0.3315834953092528	
EMLKS(ph)VMQELEDYS(ph)EGGPLYK	ddPTM_K562_Methotrexat_30min_R1	1	EMLKSVMQELEDYSEGGPLYK	21	1	F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1	F8VYC4	RGPD1;RGPD2	RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2	2	EMLKS(0.68)VMQELEDY(0.633)S(0.68)EGGPLY(0.008)K	47.68	0.026517000000000002	20049000.0	1111.2	932.19	965.36	1475.2	1015.4	1072.6	1305.0	1415.2	1288.3	1563.2	True	False	1062.3529785133112	1086.2185529792284	762.7441284249611	1345.8715063957557	1148.9428978592198	1279.8647697314643	1597.6794696310585	1365.4266138570038	1228.40721419532	1280.0893322822951	0.8299053446677993	0.8485490235611831	0.5958522652985869	1.05138873706273	0.8975489982490114	0.9998245727503795	1.2480999796963592	1.0666650986166404	0.9596261629687749	1.0	10.322028778280778	-7.640471911115535	1.5037895935014636	1.061874644959562	0.7749295001904363	0.48646244750177925	0.11790778643395633	0.33363768427505686	1.5561829183697293	0.04308049902918935	0.06610748553617014	2.28837971243024e-08	7.640471911115535	-0.2869451447691257	
EMNIQQLTNYRK	ddPTM_K562_Methotrexat_30min_R1	1	EMNIQQLTNYRK	12	1	H3BN14;P22676	H3BN14	CALB2	Calretinin	0		48.513000000000005	0.033625999999999996	14221000.0	5457.3	5337.0	6657.5	6130.8	5043.3	4938.6	4634.4	4697.3	4409.5	4936.0	False	True	5217.403626386511	6218.848536510952	5260.181730120555	5593.322282681064	5706.582348604885	5892.914555095853	5673.782171692087	4532.093296545015	4204.503307454989	4042.0425691820674	1.2907839383399382	1.5385410791874403	1.3013672271108676	1.3837860900640906	1.4118065930611037	1.45790511956145	1.4036918400986094	1.1212383885066584	1.0401927331274488	1.0	11.980868800349173	-9.362667370246827	3.054426834298437	1.0300099647011236	1.4037690817380317	0.8454329693135872	0.06825363934228713	0.09498935782070399	1.6767116316844086	0.0433878226296781	0.01806944565408676	4.338430351568342e-10	9.362667370246827	0.3737591170369081	
EMPQDLRS(ph)PART(ph)PPSEEDSAEAER	ddPTM_K562_Methotrexat_30min_R1	2	EMPQDLRSPARTPPSEEDSAEAER	24	2	K7EMD6;O43765	K7EMD6	SGTA	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	2	EMPQDLRS(0.988)PART(0.981)PPS(0.024)EEDS(0.007)AEAER;EMPQDLRS(0.999)PART(0.971)PPS(0.026)EEDS(0.004)AEAER	58.79600000000001	0.005842	51551900.0	4515.799999999999	3875.0	4985.9	4930.8	3942.2	3595.2	3714.3	4799.0	4375.799999999999	5324.5	True	False	4317.290839066247	4515.2778862619325	3939.427726354948	4498.524419560869	4460.668398602143	4289.921517936381	4547.326324943021	4630.216449900905	4172.370013099338	4360.1814545400985	0.9901631122646992	1.035571095684639	0.9035008674359103	1.0317287173626042	1.0230465050846476	0.9838860062737622	1.0429213491122153	1.0619320544743909	0.9569257739846586	1.0	12.090172460517005														
EMPQDLRS(ph)PARTPPSEEDSAEAER	ddPTM_K562_Methotrexat_30min_R1	4	EMPQDLRSPARTPPSEEDSAEAER	24	2	K7EMD6;O43765	K7EMD6	SGTA	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	EMPQDLRS(0.993)PART(0.007)PPSEEDSAEAER;EMPQDLRS(0.99)PART(0.01)PPSEEDSAEAER;EMPQDLRS(0.988)PART(0.011)PPSEEDSAEAER;EMPQDLRS(0.845)PART(0.148)PPS(0.006)EEDSAEAER	96.46700000000001	1.2440999999999998e-05	259702000.0	6607.6	5734.950000000001	7150.4	6459.200000000001	6000.09	6045.1	5979.9	7169.8	6932.799999999999	8063.6	True	False	6317.137815716841	6682.553010017516	5649.6287559975935	5892.931964554955	6789.207004152186	7213.230020048184	7321.044797277217	6917.634070118675	6610.495641211913	6603.203902118417	0.9566776839482722	1.0120167586940094	0.8555890200793435	0.8924352559617922	1.0281686140229738	1.0923833531377185	1.1087109993572217	1.0476178189650305	1.0011042728956403	1.0	12.688950480670742	-7.884752722611586	5.354659706560932	1.0568737082220285	0.9304302632512474	0.569617516167896	0.04990098804673378	0.1584349578313877	6.813204083357752	0.016749953960419093	0.01913357773189596	1.3039089832179469e-08	7.884752722611586	-0.12644344497078108	
EMVDNDLGFQQAPLMCYS(ph)RTK	ddPTM_K562_Methotrexat_30min_R1	1	EMVDNDLGFQQAPLMCYSRTK	21	1	A0A0C4DH04;Q5FWF5	A0A0C4DH04	ESCO1	N-acetyltransferase ESCO1	1	EMVDNDLGFQQAPLMCY(0.072)S(0.827)RT(0.101)K	47.397	0.027549	6050800.0	3440.1	2375.1	5899.3	4774.8	2161.1	2362.3	2105.2	2721.5	3533.7	4848.5	True	False	3288.8773230594325	2767.5449052027648	4661.117548704495	4356.200697355246	2445.322529607601	2818.7810418950585	2577.344689246975	2625.7833024391157	3369.4190582954284	3970.3896670744057	0.8283512699857625	0.6970461685797301	1.1739697963044151	1.097172081994946	0.6158898079667442	0.7099507298416093	0.6491414962668135	0.6613414608178578	0.8486368696345605	1.0	11.95506488980571	-7.76806657151391	24.999998199548845	0.7237657420160475	0.9471881414958996	0.2630982211920726	0.16242236325711246	204.66624651840522	772068.363787381	0.05185979017724472	0.06015988546500271	1.7058208895188037e-08	7.76806657151391	0.2234223994798521	
EMVY(ph)AS(ph)RES(ph)S(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	1	EMVYASRESSPTR	13	1	A0A087WU33;A0A087WVV7;A0A590UJ70;A0A087X165;Q9C0H9-2;Q9C0H9	A0A087WU33	SRCIN1	SRC kinase signaling inhibitor 1	4	EMVY(0.854)AS(0.96)RES(0.965)S(0.872)PT(0.349)R	44.251999999999995	0.032585	49984000.0	0.0	68.41	0.0	0.0	56.723	51.946999999999996	52.519	66.804	0.0	0.0	True	False	0.0	79.71358972882034	0.0	0.0	64.18306873672296	61.98502255569682	64.2977226555966	64.45446545513235	0.0	0.0											0.0														
ENAS(ph)PAPGTTAEEAMSR	ddPTM_K562_Methotrexat_30min_R1	1	ENASPAPGTTAEEAMSR	17	0	P46379-3;P46379;P46379-2;P46379-5;A0A0G2JK23;A0A024RCR6;A0A0G2JL47;H0Y710	P46379-3	BAG6;BAT3	Large proline-rich protein BAG6	1	ENAS(0.754)PAPGT(0.005)T(0.24)AEEAMSR	138.28	1.1281e-06	42664000.0	3533.2	2986.2	4084.8	3441.2	2815.8	2892.2	2707.4	3667.9	3836.9	3936.7	True	False	3377.884758534224	3479.6187932788075	3227.456302094843	3139.515338807672	3186.1270551427924	3451.0767173385634	3314.603368643009	3538.8978780144876	3658.5233564744403	3223.72548259705	1.0478202243861605	1.0793781331764045	1.0011573006194026	0.9738780041154317	0.9883369636598313	1.070524378074016	1.0281903302674356	1.097766511794774	1.134874348397406	1.0	11.654513180588122	-8.918703688923957	1.7959635152096443	1.0840970566485189	1.021320441769677	0.18811113019141767	0.04516311150816509	0.5379780172762956	3.4741390460624895	0.027636722330739404	0.01499196390109134	1.2058583946012173e-09	8.918703688923957	-0.06277661487884179	
ENGEEGCHQNGLALPVVEEGEVLS(ph)HSLEAEHR	ddPTM_K562_Methotrexat_30min_R1	1	ENGEEGCHQNGLALPVVEEGEVLSHSLEAEHR	32	0	Q9HC44	Q9HC44	GPBP1L1	Vasculin-like protein 1	1	ENGEEGCHQNGLALPVVEEGEVLS(0.502)HS(0.498)LEAEHR	63.391999999999996	0.00021966	4295600.0	1236.2	1045.2	1250.9	1078.4	870.07	802.7	706.25	1150.5	1139.0	1321.3	True	False	1181.858128184085	1217.901534637671	988.3531845599398	983.8583463240133	984.499455525282	957.8104145659587	864.6445405570389	1110.036262890392	1086.0481386078307	1081.9997663412205	1.0922905576777853	1.1256024007805492	0.9134504602547685	0.9092962650545922	0.9098887875497094	0.8852223857725887	0.7991171231772372	1.0259117399294613	1.0037415648251937	1.0	10.079484472275615	-6.762604340105029	24.99918486109642	0.9239043175889744	1.1089465284691378	0.553056637759551	0.06380607533770949	20.97818602292452	450221.89776270103	0.01744786609095281	0.03991719764785156	1.727410916773403e-07	6.762604340105029	0.18504221088016337	
ENIPEDSS(ph)MVS(ph)KR	ddPTM_K562_Methotrexat_30min_R1	1	ENIPEDSSMVSKR	13	1	O94768	O94768	STK17B	Serine/threonine-protein kinase 17B	2	ENIPEDS(0.094)S(0.906)MVS(1)KR	63.631	0.028511	0.0	216.45	235.09	261.75	307.38	252.7	267.27	327.17	250.96	219.67	308.2	True	False	206.93511716991208	273.9346266532432	206.81225202539315	280.43247263823724	285.93447930768633	318.91614488731	400.5462008269684	242.13359455451797	209.4575896470432	252.3819934809386	0.8199282140369537	1.0853968735052897	0.8194413918876223	1.1111429495045064	1.1329432633603547	1.2636247954487945	1.587063305517555	0.9593933038364931	0.8299228750757239	1.0	7.979465172827178	-7.40791968416129	5.499365762048662	1.153655449702573	0.9270738662627485	0.18642132520975763	0.20369558374082095	0.40044087844613807	16.62747467875795	0.061780756179334324	0.09221055666491784	3.909131822672269e-08	7.40791968416129	-0.2265815834398246	
ENIPEDSSMVS(ph)KR	ddPTM_K562_Methotrexat_30min_R1	1	ENIPEDSSMVSKR	13	1	O94768	O94768	STK17B	Serine/threonine-protein kinase 17B	1	ENIPEDS(0.002)S(0.052)MVS(0.946)KR	54.812	0.031905	7775300.0	502.42	341.31	469.03	538.44	437.44	471.94	341.97	394.4	381.5	519.12	True	False	480.33421838072155	397.70567622195097	370.58701267419326	491.23580118203006	494.97102741731055	563.1357257384559	418.66547757067667	380.52872845195174	363.764148269436	425.102337624351	1.1299260810115261	0.9355527858174011	0.8717595267652206	1.1555706889951733	1.1643573408309513	1.3247062551702091	0.9848580930190923	0.8951461678110378	0.8557095929001513	1.0	8.731666382108166	-8.993168257998237	24.985423357324603	0.9132571121834289	1.0909342804279463	0.31007560488219676	0.1220997711621308	229.1963119054746	838226.4249739823	0.057193849158443034	0.038460546766126265	1.0158550455677596e-09	8.993168257998237	0.1776771682445174	
ENPPGPPIAASAPGPSQSLGLNVHNMT(ph)PATSPIGASGVAHR	ddPTM_K562_Methotrexat_30min_R1	1	ENPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGASGVAHR	41	0	O95155;O95155-4;O95155-2	O95155	UBE4B	Ubiquitin conjugation factor E4 B	1	ENPPGPPIAAS(0.011)APGPS(0.095)QS(0.048)LGLNVHNMT(0.45)PAT(0.191)S(0.191)PIGAS(0.013)GVAHR	43.351000000000006	0.0020207999999999997	18672000.0	1557.2	1226.6	1756.3	1436.3	1278.1	1231.2	1140.8	1438.5	1590.2	1541.9	True	False	1488.7473525386324	1429.2748013648738	1387.6766312595905	1310.3818089996096	1446.1925524461972	1469.1119751010438	1396.6534398123458	1387.9071396504382	1516.271949090583	1262.6469686835155	1.179068567432477	1.131967079329459	1.0990218688810822	1.037805373552565	1.1453657184589399	1.1635176035252328	1.106131384664512	1.0992044285328018	1.2008676904135023	1.0	10.302235608091255														
ENPPGPPIAASAPGPSQSLGLNVHNMTPAT(ph)SPIGASGVAHR	ddPTM_K562_Methotrexat_30min_R1	1	ENPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGASGVAHR	41	0	O95155;O95155-4;O95155-2	O95155	UBE4B	Ubiquitin conjugation factor E4 B	1	ENPPGPPIAAS(0.02)APGPS(0.202)QS(0.202)LGLNVHNMT(0.015)PAT(0.266)S(0.266)PIGAS(0.03)GVAHR	56.521	0.00021190000000000003	16304000.0	1605.8	1439.4	2025.9	1609.8	1344.2	1305.3	1260.8	1591.1	1600.2	1640.2	True	False	1535.2109547306288	1677.2363843833368	1600.6912755615815	1468.6713333757368	1520.9858610423119	1557.5307513802734	1543.566494491064	1535.140111155934	1525.8070512732668	1343.143886137039	1.142998133391342	1.2487391720980598	1.1917496644125476	1.0934579299614147	1.1324072400141407	1.1596157101677496	1.1492190154924147	1.1429453888005159	1.135996721588465	1.0	10.391398148397741	-15.99999999996714	0.1615616687550754	0.41526898786901467	1.197434506598073	0.6339186935059618	0.036718240650706384	91.29008930690141	0.8421663456032698	17.096075595001956	0.1640917682651671	1.0000000000756648e-16	15.99999999996714	0.7821655187290583	
ENPPVEDSSDEDDKRNQGNLY(ph)DK	ddPTM_K562_Methotrexat_30min_R1	1	ENPPVEDSSDEDDKRNQGNLYDK	23	2	Q8TCJ2	Q8TCJ2	STT3B	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B	1	ENPPVEDS(0.102)S(0.102)DEDDKRNQGNLY(0.796)DK	50.055	0.027710000000000002	0.0	930.63	871.06	1349.1	977.23	906.78	852.6	976.67	1159.2	1052.3	1421.5	True	False	889.7206195048983	1014.9878595115663	1065.9423465423413	891.5577631474541	1026.0374639755596	1017.3528833423899	1195.7131092755299	1118.4302789591848	1003.378802683951	1164.0525753833688	0.7643302702301723	0.8719433133656274	0.9157166687177202	0.7659085010432872	0.8814356719563502	0.8739750290121863	1.0271985428851733	0.9608073575120447	0.8619703473045438	1.0	10.184940504877282	-8.589632704569754	6.519954780151068	0.9591265829862214	0.845124235527512	0.4853090537628575	0.059670030855952794	0.19804756680592311	15.112356948823404	0.02302177801498627	0.017781390862159675	2.5725705604852617e-09	8.589632704569754	-0.11400234745870941	
ENQPENSQT(ph)PTKK	ddPTM_K562_Methotrexat_30min_R1	2	ENQPENSQTPTKK	13	1	Q12834	Q12834	CDC20	Cell division cycle protein 20 homolog	1	ENQPENS(0.001)QT(0.979)PT(0.02)KK;ENQPENS(0.002)QT(0.913)PT(0.085)KK	98.552	0.006282800000000001	17367600.0	5047.7	3711.3	9191.8	4310.1	3709.3999999999996	3312.7	2667.2	4825.5	4275.700000000001	7127.8	True	False	4825.809151945322	4324.529243686174	7262.566793379211	3932.2402248619487	4197.251118100245	3952.8323910958648	3265.3874953256386	4655.784429880565	4076.9236402506617	5836.886350205827	0.8267779878522303	0.7408965986691993	1.2442535896082867	0.6736879885837225	0.7190907731058078	0.6772159253977038	0.5594399649755886	0.7976486349980735	0.6984757618429382	1.0	12.510983262494936														
ENQPENSQTPT(ph)KK	ddPTM_K562_Methotrexat_30min_R1	2	ENQPENSQTPTKK	13	1	Q12834	Q12834	CDC20	Cell division cycle protein 20 homolog	1	ENQPENSQT(0.13)PT(0.87)KK;ENQPENS(0.003)QT(0.275)PT(0.722)KK	86.54799999999999	0.021861000000000002	15720300.0	5506.2	3816.8	9810.6	4920.3	4041.3999999999996	3438.6	3536.8999999999996	4729.1	4631.9	7678.900000000001	True	False	5264.154040937724	4447.461325492786	7751.489129781554	4488.944938258569	4572.914937372711	4103.060784261251	4330.13985910965	4562.774872520603	4416.563979997906	6288.176799937639	0.8371510866217899	0.7072735813561878	1.232708522104281	0.713870662527028	0.7272242945551503	0.6525040428732763	0.6886161119312983	0.7256117341620949	0.7023600195277121	1.0	12.618426066000248														
ENSFGS(ph)PLEFR	ddPTM_K562_Methotrexat_30min_R1	4	ENSFGSPLEFR	11	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	ENS(0.002)FGS(0.998)PLEFR;ENS(0.001)FGS(0.999)PLEFR;ENS(0.001)FGS(0.999)PLEFR;ENS(0.001)FGS(0.999)PLEFR	141.65	2.9129000000000002e-05	143626000.0	6827.0	6867.200000000001	8224.7	6680.3	6413.4	5697.2	5390.120000000001	8403.0	8124.0	8807.1	True	False	6526.893254418983	8001.888077558185	6498.44786717574	6094.648470834851	7256.8745136205625	6798.103268799274	6598.991619040434	8107.461727134265	7746.317013213361	7212.048847456117	0.904998481356819	1.1095166223646231	0.9010543334669615	0.8450647797518173	1.0062153858234413	0.9426036085705586	0.9149954137329609	1.1241551324203778	1.074079942753812	1.0	12.81619345288881	-9.257065586261186	24.981171113956567	1.074338154772361	0.9491461757832359	0.3589973762797478	0.07299821991616705	388.6959684213321	2220073.1566889957	0.036147334881792795	0.019909005265658943	5.532665497277478e-10	9.257065586261186	-0.12519197898912504	
ENSIS(ph)NMS(ph)LLRDS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	ENSISNMSLLRDSR	14	1	A0A0U1RRK8;Q5T5P2-3;Q5T5P2	A0A0U1RRK8	KIAA1217	Sickle tail protein homolog	3	ENS(0.104)IS(0.896)NMS(1)LLRDS(1)R	82.94200000000001	0.013894	12844000.0	214.29	161.1	296.79	249.75	167.07	182.71	227.96	137.9	119.59	152.02	True	False	204.8700681836011	187.71903676820585	234.49783487532534	227.85480526189	189.0426333911166	218.01612164612715	279.0858328713378	133.04997883753597	114.03028700273094	124.4877048960815	1.6457052393617533	1.507932345004737	1.8837027726639906	1.8303398351836928	1.51856469318736	1.7513064589641225	2.241874674324746	1.0687800771056226	0.9159963797060916	1.0	6.959859450450587	-9.396358080430247	6.972381103720546	0.9705358675481024	1.7538740148305998	0.7621944823273353	0.19840165557934866	0.12250102711165448	6.352516088230406	0.11302085960106874	0.05354701757828476	4.0145966657674313e-10	9.396358080430247	0.7833381472824974	
ENVEYIEREES(ph)DGEYDEFGR	ddPTM_K562_Methotrexat_30min_R1	7	ENVEYIEREESDGEYDEFGR	20	1	O95218-2;O95218	O95218-2	ZRANB2	Zinc finger Ran-binding domain-containing protein 2	1	ENVEY(0.002)IEREES(0.992)DGEY(0.006)DEFGR;ENVEY(0.001)IEREES(0.987)DGEY(0.013)DEFGR;ENVEY(0.021)IEREES(0.978)DGEY(0.001)DEFGR;ENVEY(0.002)IEREES(0.782)DGEY(0.216)DEFGR;ENVEYIEREES(0.996)DGEY(0.004)DEFGR;ENVEY(0.005)IEREES(0.991)DGEY(0.004)DEFGR;ENVEYIEREES(0.999)DGEY(0.001)DEFGR	100.39	0.00020585	1626991000.0	6404.070000000001	6154.700000000001	9187.419999999998	6987.32	6316.720000000001	6140.94	6017.15	8426.19	7226.26	8432.97	True	False	6122.554750816907	7171.659562987436	7259.106095522965	6374.752504114152	7147.479399020374	7327.58974364604	7366.649058000399	8129.836121690044	6890.312749864996	6905.677415849943	0.8865972709302046	1.0385164453999849	1.0511794366272933	0.9231176205078433	1.0350149548855911	1.0610964431711973	1.0667525594364475	1.1772684462541512	0.9977750675191283	1.0	12.753567227972521	-7.981515166440449	8.248955224304817	1.0694799709973137	0.9840097749917845	0.27095144971507457	0.0650748077145976	0.24662005599020315	86.34042321510167	0.020139573851927984	0.022528152969514784	1.0434816916041467e-08	7.981515166440449	-0.08547019600552919	
ENVEYIEREESDGEY(ph)DEFGRK	ddPTM_K562_Methotrexat_30min_R1	1	ENVEYIEREESDGEYDEFGRK	21	2	O95218-2;O95218	O95218-2	ZRANB2	Zinc finger Ran-binding domain-containing protein 2	1	ENVEY(0.001)IEREES(0.192)DGEY(0.807)DEFGRK	88.574	0.00077268	67510000.0	1685.4	1076.6	2407.6	1670.8	1060.1	856.13	1104.9	1433.7	1429.4	1751.0	True	False	1611.3118340409778	1254.489850928929	1902.2776618007124	1524.3235580843468	1199.521731357651	1021.5650058830875	1352.701950954297	1383.2759583711038	1362.9475059930064	1433.8769324630875	1.1237448609157104	0.8748936694127503	1.3266673162340472	1.063078374143234	0.8365583574157475	0.7124495713368244	0.9433877624564685	0.9647103785922113	0.950533114199529	1.0	10.485705489633313	-7.67130803844784	5.967683313677694	0.892668454045117	1.101586339774745	0.36452335764247934	0.1269950875305625	0.23426468823798952	12.506725581363687	0.03884939482989645	0.050156644038722435	2.131532513368518e-08	7.67130803844784	0.208917885729628	
ENVSDLTLGPGNS(ph)PITR	ddPTM_K562_Methotrexat_30min_R1	1	ENVSDLTLGPGNSPITR	17	0	Q6DCA0	Q6DCA0	AMMECR1L	AMMECR1-like protein	1	ENVS(0.025)DLT(0.089)LGPGNS(0.659)PIT(0.227)R	93.115	0.004561600000000001	16781000.0	2426.4	1941.7	2832.5	2473.3	2480.3	1955.7	2089.3	2276.3	2108.9	2851.3	True	False	2319.738361289327	2262.532921743173	2237.996958402774	2256.4696290459765	2806.5029245225755	2333.611346414158	2557.8787095020475	2196.241238780879	2010.857699306457	2334.9019403380944	0.9935056891311795	0.9690055426548482	0.9584971941385734	0.9664087343724761	1.2019789251261632	0.9994472599034504	1.0954972734879247	0.9406139079497543	0.8612171948494267	1.0	11.189146246520542	-9.440339229732643	7.931435658945519	0.9208557799146743	1.0247337811204702	0.2322812150058332	0.07665458075005704	0.41784865841326096	36.10617556172815	0.04372014124397452	0.020793035967567146	3.627945633007157e-10	9.440339229732643	0.10387800120579593	
ENYS(ph)DS(ph)EEEDDDDVASSR	ddPTM_K562_Methotrexat_30min_R1	2	ENYSDSEEEDDDDVASSR	18	0	Q9Y2U8	Q9Y2U8	LEMD3	Inner nuclear membrane protein Man1	2	ENY(0.191)S(0.86)DS(0.945)EEEDDDDVAS(0.002)S(0.002)R;ENY(0.001)S(0.999)DS(1)EEEDDDDVASSR	221.81	4.025199999999999e-35	30550000.0	4971.3	4538.9	5921.0	5181.1	4006.16	3513.3900000000003	3991.4	4070.2999999999997	4112.68	5287.5	True	False	4752.767604466545	5288.876076891433	4678.263015252542	4726.881007176688	4533.040259688489	4192.302893275063	4886.573053705292	3927.145241931997	3921.4824044685297	4329.88251307743	1.097666643404731	1.2214825831688456	1.0804595739313727	1.09168805225089	1.0469199212674862	0.9682255536063995	1.1285694332228424	0.9069865591204712	0.9056787089775714	1.0	12.08011216409443	-7.936002408799067	0.5740502418419031	0.9486078921093065	1.1694790365787964	0.5298286880932395	0.06531051674461283	0.7584005173500493	0.5345349898997472	0.05106083985195324	0.08404880682178549	1.158770929055106e-08	7.936002408799067	0.22087114446948986	
ENYSDS(ph)EEEDDDDVASSR	ddPTM_K562_Methotrexat_30min_R1	2	ENYSDSEEEDDDDVASSR	18	0	Q9Y2U8	Q9Y2U8	LEMD3	Inner nuclear membrane protein Man1	1	ENYSDS(1)EEEDDDDVASSR;ENYS(0.002)DS(0.949)EEEDDDDVAS(0.041)S(0.007)R	329.56	0.0	42100000.0	2322.84	2311.27	3677.6	2013.44	3092.6000000000004	2613.9	2368.19	3679.3	2612.13	4824.7	True	False	2220.7307348900836	2693.168082627257	2905.7220173775936	1836.9248412672664	3499.331106873571	3118.999181056385	2899.316891329945	3549.8969335529077	2490.6926464457197	3950.9000777011197	0.562082232204223	0.6816593762589689	0.7354582399533435	0.464938319152861	0.8857047857585152	0.7894401578668154	0.733837058470218	0.8985033444881398	0.6304114499131955	1.0	11.94796564420774	-7.778757050515117	24.999172068556806	0.8117735528976827	0.6249665278559485	0.44441651252875436	0.11526848419286158	244.62299881862117	353127.4319296733	0.03400083703574158	0.03864253240213088	1.6643434434626646e-08	7.778757050515117	-0.1868070250417342	
EPAITSQNS(ph)PEAR	ddPTM_K562_Methotrexat_30min_R1	2	EPAITSQNSPEAR	13	0	A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7	A0A1W2PRL9	TCEA1	Transcription elongation factor A protein 1	1	EPAITS(0.001)QNS(0.999)PEAR;EPAITS(0.001)QNS(0.999)PEAR	155.37	1.0385999999999999e-07	34704000.0	1420.6799999999998	1299.9299999999998	1378.25	1204.4299999999998	1386.8400000000001	1340.19	1347.63	1633.54	1478.38	1689.65	True	False	1358.2286082742	1514.7213374679934	1088.9741599006609	1098.8394918982112	1569.2337684332097	1599.1627500898853	1649.8703323056736	1576.0874723007132	1409.650436483798	1383.6380119567427	0.9816358010816654	1.0947381644465466	0.7870368915064947	0.7941668864273473	1.1341360636760747	1.155766707961678	1.1924147197809525	1.139089457416545	1.018800021611338	1.0	10.434250838429328	-7.782693665962125	24.99748361290125	1.120394654069408	0.9181791600106951	0.46795025375619315	0.09978473764970382	216.09465572862095	254150.77621084344	0.03308562988851137	0.03755115956226068	1.649325349765648e-08	7.782693665962125	-0.20221549405871297	
EPAITSQNS(ph)PEAREESTSSGNVSNR	ddPTM_K562_Methotrexat_30min_R1	1	EPAITSQNSPEAREESTSSGNVSNR	25	1	A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193	A0A1W2PRL9	TCEA1	Transcription elongation factor A protein 1	1	EPAIT(0.004)S(0.011)QNS(0.98)PEAREES(0.002)T(0.002)SSGNVSNR	87.05	0.00017030000000000002	25886000.0	411.93	361.51	461.82	343.42	330.01	442.94	400.93	364.6	424.65	473.82	True	False	393.82205043105483	421.24338288065854	364.8902931437134	313.312901793947	373.4120993918861	528.5318861689864	490.8487584361534	351.7768113427528	404.90811418772233	388.00660659032553	1.0149880021163389	1.0856603359989327	0.9404228869973357	0.8074937294167173	0.9623859311915043	1.362172388799126	1.2650525792577887	0.9066258289621709	1.043559844884915	1.0	8.599937407171547	-8.066261983672234	24.99970001005182	1.123803941510163	0.9588507324178701	0.2367014206580792	0.13718022995584964	299.7146887454517	113076.9085812433	0.049391091423445256	0.04939112547290513	8.584954867131372e-09	8.066261983672234	-0.16495320909229294	
EPAITSQNSPEAREES(ph)TSSGNVSNR	ddPTM_K562_Methotrexat_30min_R1	1	EPAITSQNSPEAREESTSSGNVSNR	25	1	A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193	A0A1W2PRL9	TCEA1	Transcription elongation factor A protein 1	1	EPAIT(0.012)S(0.041)QNS(0.02)PEAREES(0.231)T(0.231)S(0.231)S(0.231)GNVS(0.002)NR	55.153	0.0097278	31745000.0	493.27	455.07	562.62	646.14	454.32	478.33	504.36	569.17	649.05	431.14	True	False	471.58644142482086	530.2625826325722	444.53375065721747	589.4939093970676	514.0710432887537	570.7605028022112	617.4755688146521	549.1519684913729	618.8758071671756	353.0563681679814	1.3357256346115354	1.501920459285633	1.2591013524665042	1.6696877964727463	1.4560593991160153	1.6166271288743557	1.748943297691382	1.5554229239397002	1.752909345265568	1.0	8.463754729033836	-7.265825168222504	24.967500164205994	1.5740001001984347	1.3792162802579988	0.11549639090249675	0.2118238530735466	663.5335800903424	3777383.560751485	0.05503661648225384	0.08496258742141041	5.422191249381163e-08	7.265825168222504	-0.19478381994043592	
EPALPLEPDSGGNT(ph)SPGVTANGEAR	ddPTM_K562_Methotrexat_30min_R1	1	EPALPLEPDSGGNTSPGVTANGEAR	25	0	V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;Q5VY93	V9GYM8	ARHGEF2	Rho guanine nucleotide exchange factor 2	1	EPALPLEPDSGGNT(0.622)S(0.378)PGVTANGEAR	169.68	5.714600000000001e-25	24675000.0	2403.5	2336.9	3037.7	2532.2	2448.1	2484.9	2577.6	3084.0	3134.4	3405.2	True	False	2297.84501786964	2723.0330044917464	2400.1282826266925	2310.2059574941245	2770.068060123257	2965.071756764606	3155.6924144988643	2975.533971972161	2988.6824281408117	2788.4852829373535	0.8240477480480443	0.9765276586374304	0.8607283306506925	0.8284805989940833	0.9933952590939638	1.0633270237816133	1.1316869534182012	1.0670789586659655	1.071794226933331	1.0	11.44526594140742	-7.990269874079179	3.430770140410652	1.0734322547837822	0.8795142101088977	0.7684403882417632	0.05001505310956814	0.11287799088605148	2.817758269145732	0.016699498700570255	0.01821818934866389	1.0226573073268883e-08	7.990269874079179	-0.1939180446748845	
EPALPLEPDSGGNTS(ph)PGVTANGEAR	ddPTM_K562_Methotrexat_30min_R1	2	EPALPLEPDSGGNTSPGVTANGEAR	25	0	V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;Q5VY93	V9GYM8	ARHGEF2	Rho guanine nucleotide exchange factor 2	1	EPALPLEPDSGGNT(0.117)S(0.883)PGVTANGEAR;EPALPLEPDSGGNT(0.073)S(0.926)PGVTANGEAR	170.83	2.1707e-25	39916000.0	9430.6	7376.5	10320.8	8573.2	8763.6	7120.6	7268.400000000001	9775.2	9420.8	10597.4	True	False	9016.0421158816	8595.341245938358	8154.60512207708	7821.600866751694	9916.167007759565	8496.555173736593	8898.523721889951	9431.400675363899	8982.829064263964	8678.108169094416	1.0389409696448217	0.9904625614773024	0.9396754411426097	0.9013025321125837	1.1426646009177763	0.9790791965460407	1.0253990326578906	1.0868037700834619	1.0351137470554652	1.0	13.083164853536667	-7.746328396214209	24.99999915239189	1.0449231770085123	0.9672344931575372	0.3311398404974264	0.05378310978897885	293.7706179317738	486020.05672875367	0.016023960108336285	0.020607887233914098	1.793377033610637e-08	7.746328396214209	-0.07768868385097516	
EPCPVVPPREAS(ph)IR	ddPTM_K562_Methotrexat_30min_R1	1	EPCPVVPPREASIR	14	1	A0A384DVL8;Q8TD84-2;Q8TD84	A0A384DVL8	DSCAML1	Down syndrome cell adhesion molecule-like protein 1	1	EPCPVVPPREAS(1)IR	93.649	0.023316	10496000.0	0.0	0.0	66.057	0.0	143.68	54.03	0.0	135.8	0.0	0.0	True	False	0.0	0.0	52.19253842231668	0.0	162.57643841285477	64.47053282546248	0.0	131.02383702782728	0.0	0.0											0.0														
EPES(ph)PPASAPIPLFGADTIGQR	ddPTM_K562_Methotrexat_30min_R1	2	EPESPPASAPIPLFGADTIGQR	22	0	Q96AY4	Q96AY4	TTC28	Tetratricopeptide repeat protein 28	1	EPES(0.996)PPAS(0.004)APIPLFGADTIGQR;EPES(1)PPASAPIPLFGADTIGQR	163.64	2.2432e-18	11584200.0	3293.75	2835.1800000000003	3659.1	2737.87	2737.23	2810.75	2309.08	2981.18	3182.9399999999996	3256.21	True	False	3148.960693824891	3303.645305179901	2891.1049145601355	2497.8451879174004	3097.223722973403	3353.8876575822424	2826.949969146117	2876.330209651091	3034.9658141355653	2666.4788156799736	1.1809434507065006	1.2389542664854978	1.0842407213435448	0.9367579345573873	1.16154071982889	1.2577964759592413	1.0601809219418914	1.0786998166784998	1.138192359259987	1.0	11.380720150978568														
EPGFEAGPEAS(ph)DDDLWTR	ddPTM_K562_Methotrexat_30min_R1	2	EPGFEAGPEASDDDLWTR	18	0	H9KVB4;O15417-2;O15417;H7C177	H9KVB4	TNRC18	Trinucleotide repeat-containing gene 18 protein	1	EPGFEAGPEAS(1)DDDLWTR;EPGFEAGPEAS(1)DDDLWTR	169.43	1.4657e-31	6081300.0	381.85	393.89	505.04999999999995	436.36	350.27	387.8	287.45	385.92	436.33	512.12	True	False	365.0643312142799	458.97362751476476	399.046906916618	398.1049962926057	396.33664450772983	462.73686155310685	351.91797972831233	372.34697485846186	416.0451135370984	419.3701054557376	0.8705063295285616	1.0944357300241734	0.9515387523461312	0.9492927395479878	0.9450760541861303	1.103409269123372	0.8391584787520233	0.8878720014003507	0.9920714617580434	1.0	8.712080213231351	-8.783460576612407	24.99997028085395	0.9204315621029772	0.9855964446536188	0.10319160107567993	0.07887982624248621	497.06030465289916	564291.3229684969	0.03193200050537678	0.021547949181679377	1.6464154140643358e-09	8.783460576612407	0.06516488255064168	
EPGGRS(ph)PAFVQLAPLSSK	ddPTM_K562_Methotrexat_30min_R1	2	EPGGRSPAFVQLAPLSSK	18	1	P51610-2;P51610;A6NEM2;P51610-4	P51610-2	HCFC1	Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6	1	EPGGRS(1)PAFVQLAPLSSK;EPGGRS(1)PAFVQLAPLSSK	83.758	0.0050128	32581000.0	2724.6000000000004	1945.8200000000002	3256.1000000000004	2726.2	1944.25	1765.51	1499.06	2498.8	2104.84	3432.5	True	False	2604.829846343923	2267.3336817151467	2572.6891072392827	2487.198278698555	2199.952953676174	2106.6698206308033	1835.2623645556585	2410.9157876666764	2006.9864478202867	2810.840988394946	0.9267083613404042	0.8066388995593257	0.9152737980771891	0.8848591183092152	0.782667167142883	0.7494802549587692	0.6529228697506773	0.8577204465213679	0.714016358842953	1.0	11.456786126234219	-7.775118324187933	7.490401550789411	0.7762851448685133	0.8803092434429605	0.17433365653010036	0.09238491572411943	0.2190557729348304	64.27659480775351	0.02683163995977335	0.031660834523235586	1.6783466877336932e-08	7.775118324187933	0.10402409857444717	
EPGPIAPSTNSS(ph)PVLK	ddPTM_K562_Methotrexat_30min_R1	1	EPGPIAPSTNSSPVLK	16	0	Q14674-2;Q14674	Q14674-2	ESPL1	Separin	1	EPGPIAPS(0.051)T(0.252)NS(0.252)S(0.445)PVLK	116.0	0.00075903	8326200.0	1256.9	857.57	1560.3	974.01	871.49	838.0	866.71	1119.4	998.32	1499.8	True	False	1201.648180969566	999.2688663023604	1232.8143527611103	888.6200555480815	986.1062104149406	999.9316399729329	1061.0917801715973	1080.0300675180404	951.9083211018171	1228.1716866408567	0.978404073339425	0.8136231091887788	1.003780144234518	0.7235308102391818	0.8029058324182805	0.8141627517141534	0.8639604639264762	0.8793803661701444	0.7750612812980237	1.0	10.262296534419118	-3.0000089916033392	0.9924827412403262	0.8414947048587592	121.16473564030018	0.13951817104911401	0.08688659514926662	3165.0393867193093	4.4243194455078685	0.02681083063158308	865884.3217294265	0.000999979296282514	3.0000089916033392	120.32324093544142	
EPGRPTPTYHLVPNT(ph)SQSQVEEDVSSPPQR	ddPTM_K562_Methotrexat_30min_R1	2	EPGRPTPTYHLVPNTSQSQVEEDVSSPPQR	30	1	H3BSB6;H3BPV6;H3BUR2;H3BUA4;H3BNF5;E7EPZ8;Q92536	H3BSB6	SLC7A6	Y+L amino acid transporter 2	1	EPGRPTPTYHLVPNT(0.485)S(0.485)QS(0.031)QVEEDVSSPPQR;EPGRPTPTYHLVPNT(0.545)S(0.37)QS(0.085)QVEEDVSSPPQR	126.68	5.3831e-16	143010000.0	2580.7	1870.9699999999998	2662.3	2863.4	2167.8	2054.63	2183.7	2390.5	2437.3	2727.8999999999996	True	False	2467.2555180429285	2180.1159914476107	2103.5196124821546	2612.3701677152985	2452.903697044727	2451.6581687799353	2673.4503125159704	2306.424760051703	2323.990454985837	2233.8508761085413	1.1044853281974611	0.9759451782410207	0.9416562381042064	1.1694469830797987	1.0980606285222514	1.097503058508016	1.1967899653056648	1.0324882402488693	1.0403516545537375	1.0	11.125317164539034	-7.257735632085227	24.98502003663614	1.0970318111862012	1.0042205450500716	0.23368299640636891	0.06837940851098974	430.15782809969664	2901772.6022027936	0.018835684163038196	0.031152117366744964	5.524136074777613e-08	7.257735632085227	-0.09281126613612956	
EPGRPTPTYHLVPNTS(ph)QSQVEEDVSSPPQR	ddPTM_K562_Methotrexat_30min_R1	1	EPGRPTPTYHLVPNTSQSQVEEDVSSPPQR	30	1	H3BSB6;H3BPV6;H3BUR2;H3BUA4;H3BNF5;E7EPZ8;Q92536	H3BSB6	SLC7A6	Y+L amino acid transporter 2	1	EPGRPTPTYHLVPNT(0.245)S(0.657)QS(0.091)QVEEDVS(0.004)S(0.002)PPQR	51.066	0.0055534	53959000.0	777.74	997.96	1128.5	911.92	799.23	732.95	1032.9	904.24	1150.3	1142.4	True	False	743.5514808395812	1162.8559275803768	891.6432718649705	831.973389447138	904.3427538467838	874.5822142221497	1264.554118147065	872.4373666718889	1096.8228040742656	935.5002899176649	0.7948169432475778	1.243031071302738	0.9531191828315154	0.8893352555992917	0.9666942528968929	0.9348818206129292	1.3517410221843553	0.9325890927822948	1.172445178152536	1.0	9.869594290341492														
EPLIPAS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	EPLIPASPK	9	0	Q9Y613	Q9Y613	FHOD1	FH1/FH2 domain-containing protein 1	1	EPLIPAS(1)PK	84.507	0.022927	8575400.0	2617.6	2317.4	3987.8	2454.2	2317.7	2019.0	1577.0	2518.5	3061.9	3356.1	True	False	2502.53343822574	2700.310960935074	3150.815276511412	2239.0440963913143	2622.5181744813026	2409.1431755433778	1930.6823935694867	2429.92292750061	2919.5529373163477	2748.277768726081	0.9105824260936144	0.9825465939662856	1.1464690041035848	0.8147080771348619	0.9542405808918389	0.8766010491945639	0.7025062806749781	0.8841620578355736	1.0623209089486099	1.0	11.424312109528346	-7.281372095874304	24.992921201053313	0.8875469548750932	1.0101340987721985	0.18407531829133894	0.10797005030934968	1267.5542105779127	1589337.2671764095	0.03121749058700047	0.046366975166479814	5.231520170664779e-08	7.281372095874304	0.12258714389710534	
EPLIPAS(ph)PKAEPIWELPTR	ddPTM_K562_Methotrexat_30min_R1	2	EPLIPASPKAEPIWELPTR	19	1	Q9Y613	Q9Y613	FHOD1	FH1/FH2 domain-containing protein 1	1	EPLIPAS(0.998)PKAEPIWELPT(0.002)R;EPLIPAS(0.994)PKAEPIWELPT(0.006)R	61.87	0.026073000000000002	35287000.0	6136.6	4029.4	7418.599999999999	5626.8	3941.2	3652.7	3740.7999999999997	5199.9	5218.2	7327.299999999999	True	False	5866.8424117573695	4695.18986191067	5861.537241167456	5133.50718017058	4459.536881074212	4358.532579151708	4579.769624517903	5017.016569668624	4975.607020968734	6000.254967011297	0.9777655189675416	0.7824983917723958	0.9768813614410563	0.8555481739349419	0.7432245638880726	0.7263912288918409	0.7632625029597815	0.8361338971846357	0.8292325990018828	1.0	12.550808090687815	-3.0000050306206956	0.6436437986914223	0.8125652186492142	13.02064401263229	0.1485418596775998	0.08961986801338767	382.06042498294954	2.5259639461261534	0.03810010706365445	6635.657473451089	0.0009999884166348655	3.0000050306206956	12.208078793983077	
EPLPAVDLDT(ph)LD	ddPTM_K562_Methotrexat_30min_R1	1	EPLPAVDLDTLD	12	0	Q9BQK8;Q9BQK8-2	Q9BQK8	LPIN3	Phosphatidate phosphatase LPIN3	1	EPLPAVDLDT(1)LD	94.465	0.031407	13423000.0	255.8	169.54	281.64	309.35	179.79	355.98	317.44	304.5	122.74	231.81	True	False	244.55533828627165	197.55360331273496	222.52761283832552	282.2297657968597	203.43553634637485	424.7680968944684	388.63400064343523	293.790562407757	117.03384419027675	189.8269627151733	1.288306649320496	1.0407035991465299	1.1722655709990897	1.4867738584656838	1.0716893608608205	2.237659449526217	2.0473066369742368	1.5476756210263785	0.6165290879456398	1.0	7.568541114761591														
EPRSLSGTSLT(ph)DMS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	EPRSLSGTSLTDMSK	15	1	F5H423	F5H423			2	EPRS(0.001)LS(0.001)GTS(0.139)LT(0.993)DMS(0.866)K	57.425	0.032429	15374000.0	1225.2	1461.1	1450.4	1324.9	1352.3	1326.6	1148.4	1373.0	1462.1	1442.3	True	False	1171.3416750130577	1702.5219405464036	1145.9808608887486	1208.748074039952	1530.1511530185367	1582.946674926124	1405.957933275332	1324.7108117761911	1394.1272901303869	1181.0854938272485	0.9917501155800192	1.441489163523181	0.9702776529540253	1.0234213190808603	1.2955464790784605	1.3402473260395946	1.1903947179296865	1.121604505939305	1.1803779636754212	1.0	10.205897683822561	-10.728149743396695	1.1975468665351667	0.9998126846227627	1.1805696267938381	0.1094290845892344	0.14658263162611795	11.15723770958272	16.20721113972801	0.14705695063091362	0.042871195874038676	1.8700372461237492e-11	10.728149743396695	0.1807569421710754	
EPSAPSIPTPAYQS(ph)SPAGGHAPTPPTPAPR	ddPTM_K562_Methotrexat_30min_R1	1	EPSAPSIPTPAYQSSPAGGHAPTPPTPAPR	30	0	Q8WUM4;Q8WUM4-2	Q8WUM4	PDCD6IP	Programmed cell death 6-interacting protein	1	EPSAPS(0.004)IPT(0.235)PAY(0.198)QS(0.323)S(0.241)PAGGHAPTPPTPAPR	94.669	1.2755e-06	100170000.0	2716.7	2242.1	3056.2	2252.9	2500.5	2163.6	2054.7	2501.8	2756.5	2796.4	True	False	2597.2771208847294	2612.5689158162277	2414.7453854441487	2055.3917548529002	2829.359578586744	2581.6850790518333	2515.5187787363507	2413.8102759662615	2628.3509166571434	2289.9448623299722	1.1342094578827775	1.1408872583761656	1.05449935724094	0.8975725960325442	1.2355579495079756	1.1274005420484323	1.0985062654202344	1.0540910026585788	1.1477791277397178	1.0	11.161097145953399	-12.173495342274093	4.517087339129619	0.9999821760429712	1.0964713424129116	0.11195550053401426	0.0833388987270156	1.523122272663035e-05	2.7869695129425623e-06	0.08215897255245112	0.019922797435829715	6.706634794022602e-13	12.173495342274093	0.09648916636994032	
EPSAPSIPTPAYQSS(ph)PAGGHAPTPPTPAPR	ddPTM_K562_Methotrexat_30min_R1	1	EPSAPSIPTPAYQSSPAGGHAPTPPTPAPR	30	0	Q8WUM4;Q8WUM4-2	Q8WUM4	PDCD6IP	Programmed cell death 6-interacting protein	1	EPSAPSIPT(0.002)PAY(0.006)QS(0.249)S(0.742)PAGGHAPTPPTPAPR	109.02	1.8868e-12	100800000.0	2424.2	2092.2	2970.4	2569.6	2429.5	2361.9	2347.7	2653.4	2916.2	3119.9	True	False	2317.635070655119	2437.9004886805724	2346.953632917775	2344.3271575613717	2749.021834103776	2818.3037475561705	2874.231487243552	2560.078418038562	2780.626498514624	2554.855877550878	0.9071490454783843	0.9542223144961034	0.9186246682406205	0.9175966355521696	1.0759987904832535	1.1031165289283704	1.1250072900389323	1.0020441624647298	1.0883692199421333	1.0	11.319026193982651	-7.762210805423311	24.999431766173835	1.0706888132901873	0.9261160511854301	0.7571611334214379	0.039153872880311205	9.758335510041647	316240.8330401447	0.011832452340227303	0.014222564450718757	1.7289769145568244e-08	7.762210805423311	-0.14457276210475722	
EPSPS(ph)S(ph)S(ph)S(ph)LALMS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	EPSPSSSSLALMSR	14	0	O60336-4;O60336-2;O60336-3;O60336-6;O60336	O60336-4	MAPKBP1	Mitogen-activated protein kinase-binding protein 1	5	EPS(0.221)PS(0.892)S(0.892)S(0.997)S(0.997)LALMS(1)R	58.626000000000005	0.026088	174650000.0	106.3	0.0	65.125	166.43	0.0	0.0	0.0	0.0	129.66	0.0	True	False	101.62717928002607	0.0	51.45615248578309	151.83934029924464	0.0	0.0	0.0	0.0	123.63213490069482	0.0											0.0														
EPTPSIAS(ph)DISLPIATQELR	ddPTM_K562_Methotrexat_30min_R1	4	EPTPSIASDISLPIATQELR	20	0	A0A499FIX8;H7BXI1;A0A087WXU3;A0FGR8-5;A0FGR8-2;A0FGR8;A0FGR8-6	A0A499FIX8	ESYT2	Extended synaptotagmin-2	1	EPTPSIAS(0.806)DIS(0.193)LPIATQELR;EPTPSIAS(0.936)DIS(0.064)LPIATQELR;EPTPSIAS(0.973)DIS(0.027)LPIATQELR;EPTPS(0.009)IAS(0.905)DIS(0.086)LPIATQELR	227.09	1.4005999999999998e-45	144201600.0	2419.2499999999995	1755.7199999999998	2408.45	2131.63	1853.71	1730.55	1913.77	2379.98	2549.12	2588.68	True	False	2312.9026667281582	2045.822887862658	1902.9492584166492	1944.75330746908	2097.505356697473	2064.9542954118847	2342.981638770752	2296.274754414495	2430.611967592621	2119.844967177924	1.091071612565727	0.965081371297728	0.8976832211225236	0.9174035543071164	0.9894616772328445	0.9741062801214594	1.1052608445653844	1.08322768408458	1.1465989283303157	1.0	11.04974304319483	-8.752708264283488	17.604307534752262	1.0907078037499311	0.9670011789749638	0.4573526746408527	0.059022441935436876	4.333557460233661	8738.088849684584	0.023398735816057385	0.017655052571593874	1.767224548624381e-09	8.752708264283488	-0.1237066247749673	
EPVAGS(ph)PFERR	ddPTM_K562_Methotrexat_30min_R1	1	EPVAGSPFERR	11	1	Q96JB3-2;Q96JB3	Q96JB3-2	HIC2	Hypermethylated in cancer 2 protein	1	EPVAGS(1)PFERR	109.44	0.0013492	0.0	2060.8	1918.2	2668.4	2347.7	2026.3	1677.3	1955.0	2101.1	2366.0	2442.1	True	False	1970.2096995322456	2235.1499461748767	2108.3393058435863	2141.880786039395	2292.7939668427593	2001.4144865472551	2393.4585158074483	2027.203122085183	2256.0051764232917	1999.8120255671656	0.9851974457316685	1.117680020721431	1.0542687407060878	1.071041057187331	1.146504740210521	1.0008013058025467	1.196841745727897	1.013696835586459	1.12810861600028	1.0	10.965648683398562	-6.248237163933612	23.935529063393556	1.0834369870537603	0.9851973289616942	0.1714108538085536	0.0629800312675597	1942.0195536013086	3520761.723633543	0.014093438414810887	0.2439722600771989	5.646285525225421e-07	6.248237163933612	-0.09823965809206614	
EQAEEERYFR	ddPTM_K562_Methotrexat_30min_R1	1	EQAEEERYFR	10	1	A0A0B4J230;Q9UII2-3;Q9UII2-2;Q9UII2	A0A0B4J230	ATPIF1	ATPase inhibitor, mitochondrial	0		80.706	0.011398	0.0	1766.2	1596.3	1881.1	1850.3	1408.8	1390.4	1364.6	1421.1	1637.3	2299.7	False	True	1688.5599627881654	1860.0614425393355	1486.2828167524997	1688.0870717760758	1594.0818933465323	1659.0751219789577	1670.6462867881562	1371.119107512853	1561.1822803710297	1883.2020454513786	0.8966430165401822	0.9877120976116525	0.789231734503696	0.8963919064624124	0.8464741726448433	0.8809862574152522	0.8871306670590008	0.7280785993327731	0.8290041337528576	1.0	10.878972077143944	-6.755466847993599	24.999997698278037	0.850391214297025	0.9421775522130947	0.18265798101497455	0.07078496654552016	210.95820175138084	883010.6264772228	0.01750998636347915	0.04382619534236603	1.756034936564332e-07	6.755466847993599	0.09178633791606972	
EQDLPLAEAVRPKT(ph)PPVVIK	ddPTM_K562_Methotrexat_30min_R1	1	EQDLPLAEAVRPKTPPVVIK	20	2	Q96A49	Q96A49	SYAP1	Synapse-associated protein 1	1	EQDLPLAEAVRPKT(1)PPVVIK	59.585	0.027039999999999998	79405000.0	1539.8	1207.2	2707.5	1928.5	1004.1	1131.5	832.35	1320.8	1248.1	2380.9	True	False	1472.1122357044615	1406.669281108492	2139.2327501767027	1759.4313991894087	1136.1567497936203	1350.1463611329038	1019.0256755152582	1274.346715363434	1190.076103420925	1949.6959386072904	0.7550470853193769	0.7214813619160052	1.0972135233070253	0.9024132247237527	0.5827353523674063	0.692490728629892	0.5226587671117426	0.6536130532608726	0.6103906152007589	1.0	10.92903343321777	-7.7547162992794	24.955120920902445	0.6527213999857768	0.8747972161659947	0.26625112098233406	0.15292762911870245	184.73535175378046	685707.667936169	0.04486589715867121	0.05658780295296771	1.7590723440182736e-08	7.7547162992794	0.22207581618021788	
EQDNSESPNGRT(ph)SPLVSQNNEQGSTLR	ddPTM_K562_Methotrexat_30min_R1	1	EQDNSESPNGRTSPLVSQNNEQGSTLR	27	1	A0A1W2PNZ9;Q15652-3;Q15652;H7BXU7	A0A1W2PNZ9	JMJD1C	Probable JmjC domain-containing histone demethylation protein 2C	1	EQDNS(0.002)ES(0.089)PNGRT(0.684)S(0.217)PLVS(0.008)QNNEQGSTLR	61.976000000000006	0.011134999999999999	30548000.0	505.69	520.43	572.36	572.8	576.31	385.83	326.11	503.72	505.35	716.09	True	False	483.460473096109	606.4222117025284	452.2294577621929	522.583513329372	652.1048665208262	460.38618693407733	399.2484688439726	486.0038820887859	481.85638880199093	586.3991619460268	0.8244562824607303	1.034145768029499	0.7711973125292715	0.8911737042650676	1.1120494517024004	0.7851071706962162	0.680847611580864	0.8287936164095653	0.8217208005599808	1.0	9.195739231416342														
EQDNSESPNGRTS(ph)PLVSQNNEQGSTLR	ddPTM_K562_Methotrexat_30min_R1	1	EQDNSESPNGRTSPLVSQNNEQGSTLR	27	1	A0A1W2PNZ9;Q15652-3;Q15652;H7BXU7	A0A1W2PNZ9	JMJD1C	Probable JmjC domain-containing histone demethylation protein 2C	1	EQDNSESPNGRT(0.222)S(0.768)PLVS(0.01)QNNEQGSTLR	98.991	7.3961e-08	28228000.0	421.76	547.78	776.13	475.6	567.89	295.14	362.32	541.41	563.11	615.58	True	False	403.2199354011649	638.2913343320156	613.2309194440049	433.90488641663603	642.5774889356627	352.1716279494168	443.57948309327577	522.3683034258909	536.93113900918	504.09249690784003	0.7998927535612239	1.2662186766265444	1.2165047549916577	0.8607644213676207	1.274721391167901	0.6986250144758692	0.8799565274512954	1.0362548671725065	1.065144080308229	1.0	8.977544670695282	-8.24968829907056	24.994250111326053	0.9347595420789194	1.0887663059051598	0.14991731033197464	0.1755389452509897	1485.1629681216068	3158905.952423666	0.05793347752507035	0.0574834170852397	5.6274507250400544e-09	8.24968829907056	0.15400676382624034	
EQDRVHS(ph)PCPTSGSEK	ddPTM_K562_Methotrexat_30min_R1	1	EQDRVHSPCPTSGSEK	16	1	X6RLP6;Q96LT9-2;Q96LT9	X6RLP6	RNPC3	RNA-binding protein 40	1	EQDRVHS(0.989)PCPT(0.006)S(0.003)GS(0.002)EK	74.324	0.023754	8783500.0	2715.7	1706.5	3047.4	2356.3	1831.2	1727.4	1615.5	2093.5	2128.1	2960.9	True	False	2596.321079687366	1988.4701194596091	2407.7923851850355	2149.7268373917586	2072.0348971437893	2061.1956024931305	1977.8169986122414	2019.8704183929049	2029.1650954972133	2424.652318292379	1.0708013928841926	0.8201052598172254	0.9930464533079046	0.8866124108489735	0.8545699032853795	0.8500994501119973	0.8157115903550113	0.8330556934511124	0.8368890995993614	1.0	11.243562172317766	-7.478741303599922	4.771228677328611	0.8544530736400975	0.9471970178784314	0.23273395095899596	0.07553567297131891	0.29070981096378656	15.078094005594945	0.020465600828236195	0.029835536656389855	3.320922161752403e-08	7.478741303599922	0.09274394423833388	
EQFDTLT(ph)PEPPVDPNQEVPPGPPR	ddPTM_K562_Methotrexat_30min_R1	1	EQFDTLTPEPPVDPNQEVPPGPPR	24	0	Q6PKG0;A0A0B4J210;Q6PKG0-3;E5RH50;H0YC33	Q6PKG0	LARP1	La-related protein 1	1	EQFDT(0.215)LT(0.785)PEPPVDPNQEVPPGPPR	64.589	0.010947	11317000.0	481.22	489.84	726.25	359.78	375.41	509.95	327.95	280.71	464.92	425.08	True	False	460.0661449965585	570.7777341436249	573.8200497934735	328.23864599448547	424.78299515986754	608.4906202914046	401.5011356823798	270.8372701920575	443.3059706773949	348.09389289058225	1.3216725555744608	1.6397234935777507	1.6484634218326968	0.9429600826052471	1.2203115419016883	1.7480646248587703	1.153427692592657	0.7780580921515645	1.273524125908009	1.0	8.443332692794206	-8.989847004276747	24.996694250297608	1.0086232089980873	1.4131891346007697	0.3583700957134788	0.2467616137019855	233.05416052752437	573778.4676609765	0.1069380921268486	0.07201340641657365	1.0236535472452836e-09	8.989847004276747	0.40456592560268234	
EQFLDGDGWTSR	ddPTM_K562_Methotrexat_30min_R1	2	EQFLDGDGWTSR	12	0	K7EJB9;P27797	K7EJB9	CALR	Calreticulin	0	;	264.3	1.8004999999999998e-102	211708000.0	5734.5	4669.799999999999	5144.7	5585.6	4843.1	4706.7	3861.9	5292.9	5542.8	6546.2	False	True	5482.418246296424	5441.4050769718615	4064.897776485348	5095.919120203455	5480.052539513477	5616.203162124823	4728.029382197843	5106.745706955722	5285.116437818691	5360.619746025053	1.022720973701163	1.015070147627373	0.7582887742596377	0.9506212642637307	1.0222796615217828	1.047677960424126	0.8819930541993243	0.9526409163310677	0.9859151904474575	1.0	12.388184086246413	-6.5656535385733035	24.999984291739334	0.9475607872157487	1.0208128262971248	0.11233206611746616	0.07745264857229488	266.27547708680305	155625.11379289292	0.020604039939764524	0.05451324396696681	2.7186071916765473e-07	6.5656535385733035	0.07325203908137612	
EQIS(ph)DIDDAVR	ddPTM_K562_Methotrexat_30min_R1	2	EQISDIDDAVR	11	0	P53999	P53999	SUB1	Activated RNA polymerase II transcriptional coactivator p15	1	EQIS(1)DIDDAVR;EQIS(1)DIDDAVR	158.31	1.5276e-07	19025300.0	2818.54	2473.83	2434.85	2150.93	2385.5299999999997	1936.6599999999999	2427.95	3191.2999999999997	2580.8999999999996	2604.09	True	False	2694.6403564245024	2882.588359579706	1923.8082591939965	1962.3613064342628	2699.2690084007336	2310.892135883031	2972.4795925599446	3079.06017015394	2460.914522329194	2132.4640668519714	1.2636275557048133	1.3517640950616803	0.9021527204601384	0.920231828023803	1.2657981207559115	1.0836722511786387	1.3939177868295984	1.4438977978650638	1.1540239109220227	1.0	11.058305716235555	-8.74612371135484	24.99580312780412	1.2849513790527969	1.1273493712657303	0.07841653722454645	0.17863304599524404	482.8105605831442	787967.5645081747	0.07089065375901155	0.05470036977767743	1.7942224591394543e-09	8.74612371135484	-0.15760200778706657	
EQISDIDDAVR	ddPTM_K562_Methotrexat_30min_R1	2	EQISDIDDAVR	11	0	P53999	P53999	SUB1	Activated RNA polymerase II transcriptional coactivator p15	0	;	143.97	3.1826e-06	31390000.0	5324.4	4125.2	5565.299999999999	4757.9	5132.2	4068.6	4266.4	5856.700000000001	6126.4	6402.700000000001	False	True	5090.345751256549	4806.819183589092	4397.2195843244335	4340.782294116299	5807.174256837786	4854.799368011786	5223.248804010687	5650.716541390841	5841.585001200187	5243.10898656848	0.9708639977343078	0.916787958423704	0.8386664468713122	0.8279023581688435	1.1075822134756876	0.9259390526591293	0.996212136232783	1.0777415758220072	1.1141452554514606	1.0	12.35620681959659	-8.297652388794713	0.9371849955333506	1.0603972335265324	0.8963802311963549	0.3952446821723248	0.07561349879455674	0.5794855441592718	1.0822832808134872	0.04799769924984483	0.04248957507884619	5.039037742063944e-09	8.297652388794713	-0.16401700233017746	
EQMMNSSISSGSGS(ph)LR	ddPTM_K562_Methotrexat_30min_R1	3	EQMMNSSISSGSGSLR	16	0	C9JUA9;A0A0C4DFT3;A0A590UKA8;A0A590UJC5;A0A590UJR5;A0A590UJ08;A0A590UJ81;A0A590UJ18;A0A590UJ68;A0A590UJ25;A0A590UJS9;A0A590UJX2;A0A590UK48;A0A590UJR4;A0A590UJD9;A0A590UK81;A0A590UJ29;A0A590UJ64;E7EQD7;A0A590UK02;A0A590UK70;A0A590UJL2;Q12959-7;Q12959;Q12959-4;Q12959-5;Q12959-6;Q12959-3;Q12959-9;Q12959-8;Q12959-2	C9JUA9	DLG1	Disks large homolog 1	1	EQMMNSSISS(0.001)GS(0.064)GS(0.935)LR;EQMMNSSISSGS(0.009)GS(0.99)LR;EQMMNSSISSGS(0.011)GS(0.989)LR	114.06	0.00053576	84415900.0	15638.2	13251.0	15226.900000000001	14957.2	13373.5	12745.5	12838.2	15048.5	15681.6	17312.3	True	False	14950.763452651961	15440.502521511453	12030.981777900513	13645.925498551107	15132.349659759977	15208.387490781633	15717.49315480265	14519.235725429	14952.565838799444	14176.874710383043	1.0545881061996074	1.0891330308649012	0.848634274032845	0.9625482186533628	1.067396726633773	1.072760238167522	1.1086712322632908	1.0241492587075778	1.0547152418472239	1.0	13.791251905301653	-7.768819398885247	24.98067154620773	1.059432950796148	0.9858912979893988	0.1952920777358561	0.06498262790726005	272.9718660826183	923982.0268722188	0.02127649411784426	0.024604016910222116	1.7028664972464586e-08	7.768819398885247	-0.07354165280674918	
EQSEVSVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	3	EQSEVSVSPR	10	0	E9PI52;Q7L4I2	E9PI52	RSRC2	Arginine/serine-rich coiled-coil protein 2	1	EQSEVSVS(1)PR;EQSEVSVS(1)PR;EQSEVS(0.001)VS(0.999)PR	166.24	1.6269e-08	997546000.0	7609.91	5945.66	8624.3	6980.95	6425.0	6163.39	6084.999999999999	7513.1	7809.699999999999	8519.1	True	False	7275.38746824895	6928.079256059904	6814.177288032845	6368.940952124085	7270.000116944538	7354.3778884162	7449.7161476666615	7248.860014534382	7446.628751611572	6976.208438233175	1.042885620844716	0.9931009541071768	0.9767737515822612	0.9129516425024008	1.0421133745232203	1.0542084505546687	1.0678746504818324	1.0390830604783734	1.067432089729466	1.0	12.768227430899758	-7.963148235083365	24.999983064137563	1.0493930487426928	0.9813796590570261	0.44936712245903065	0.03443851585922165	150.91497293679885	102379.0489711776	0.010812434068964278	0.012260112685317572	1.0885584788985894e-08	7.963148235083365	-0.06801338968566673	
EQSSDLTPSGDVS(ph)PVKPLSR	ddPTM_K562_Methotrexat_30min_R1	2	EQSSDLTPSGDVSPVKPLSR	20	1	Q8WYQ5-3;Q8WYQ5	Q8WYQ5-3	DGCR8	Microprocessor complex subunit DGCR8	1	EQSSDLTPS(0.001)GDVS(0.999)PVKPLSR;EQSSDLTPSGDVS(0.936)PVKPLS(0.064)R	135.37	1.6582e-08	120859000.0	4356.3	3025.7	6002.5	3832.4	3151.5	3149.8999999999996	2740.6	3933.8	4096.6	4960.5	True	False	4164.80226808634	3525.645496893608	4742.657279015937	3496.4194421848533	3565.977489268594	3758.5735951679494	3355.249313770787	3795.446024300934	3906.1499601587716	4062.105381772216	1.0252816893365084	0.8679355077084285	1.1675367409958257	0.8607407030537044	0.8778643472102216	0.9252772249665661	0.8259877571927882	0.9343543969420744	0.9616072437920348	1.0	11.988011952112027														
EQSSDLTPSGDVSPVKPLS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	EQSSDLTPSGDVSPVKPLSR	20	1	Q8WYQ5-3;Q8WYQ5	Q8WYQ5-3	DGCR8	Microprocessor complex subunit DGCR8	1	EQSSDLTPSGDVS(0.014)PVKPLS(0.986)R	109.98	0.0001261	93413000.0	2873.2	2382.6	4315.9	3086.1	2368.7	2080.3	1786.8	2612.9	2783.2	3566.9	True	False	2746.897568272541	2776.284152724562	3410.0515702632065	2815.5464044793534	2680.2255684056845	2482.2885329781534	2187.5353841661104	2521.0028259941823	2653.8096394849113	2920.899846032317	0.9404285367757006	0.9504893351601228	1.1674661063423115	0.9639311694661242	0.9176026942678097	0.8498369214370828	0.7489251598741422	0.8630911564525756	0.908558930252191	1.0	11.512197175485909	-7.819258204569834	2.628775620543825	0.8599174435709002	1.0173311459088057	0.35644316065146886	0.08308450453833459	0.2777526681491493	3.918429814025979	0.028079102825204486	0.0341464419774248	1.5161486914448017e-08	7.819258204569834	0.15741370233790553	
EQSVRKS(ph)S(ph)TFPRT(ph)GY(ph)DSVK	ddPTM_K562_Methotrexat_30min_R1	1	EQSVRKSSTFPRTGYDSVK	19	3	Q9P2M4	Q9P2M4	TBC1D14	TBC1 domain family member 14	4	EQS(0.476)VRKS(0.515)S(0.525)T(0.486)FPRT(0.9)GY(0.895)DS(0.203)VK	41.208	0.033051	0.0	934.6	671.08	1030.4	782.15	803.68	475.17	687.23	858.09	904.57	922.86	True	False	893.5161030584421	781.9645635903637	814.1331212491498	713.5801238662153	909.3780068460685	566.9898775249861	841.3588213904612	827.9104883299584	862.5167381391449	755.7211113037608	1.1823357713495115	1.034726371797829	1.07729307686617	0.9442373822734098	1.2033248684520943	0.7502633829387433	1.1133191977910466	1.0955238327293217	1.141316188257784	1.0	9.561710115264638	-12.518380825874333	15.146624053056376	0.9999999972471699	1.0542855391240102	0.01844478634059299	0.1252283767204996	1.1222798191578717e-08	3.43533994608891e-10	0.11639763609298935	0.028230571950225932	3.031231979691258e-13	12.518380825874333	0.054285541876840315	
EQTLS(ph)PTITSGLHNIAR	ddPTM_K562_Methotrexat_30min_R1	3	EQTLSPTITSGLHNIAR	17	0	H7BXG7;D6REX3;O94979-7;O94979-6;O94979-3;O94979-10;O94979-4;O94979-9;O94979-2;O94979;O94979-8;H0Y8W8	H7BXG7	SEC31A	Protein transport protein Sec31A	1	EQT(0.181)LS(0.599)PT(0.219)IT(0.001)SGLHNIAR;EQT(0.365)LS(0.424)PT(0.207)IT(0.004)SGLHNIAR;EQT(0.146)LS(0.541)PT(0.311)IT(0.001)SGLHNIAR	175.93	7.7917e-11	324723000.0	9831.0	8130.299999999999	10232.2	9840.5	9110.0	7718.2	8708.3	11839.0	11204.8	12875.800000000001	True	False	9398.841011307028	9473.693883529133	8084.601051286449	8977.798643361877	10308.124679434202	9209.6329160371	10661.357950488995	11422.615659590925	10683.89129365498	10543.86785094702	0.8914035289680581	0.8985027143220724	0.7667585714819362	0.8514710891938501	0.9776416799939651	0.8734586819778777	1.0111429791422721	1.08334207342754	1.0132800832377071	1.0	13.364116573447152	-8.576241026637794	1.1796621423527203	1.0421422230205064	0.858059181420398	0.6367134366591813	0.054662096032268084	0.3029591961950474	0.8602221127623417	0.034181969726146476	0.02312327303424702	2.653132706195029e-09	8.576241026637794	-0.18408304160010835	
EQTLSPT(ph)ITSGLHNIAR	ddPTM_K562_Methotrexat_30min_R1	1	EQTLSPTITSGLHNIAR	17	0	H7BXG7;D6REX3;O94979-7;O94979-6;O94979-3;O94979-10;O94979-4;O94979-9;O94979-2;O94979;O94979-8;H0Y8W8	H7BXG7	SEC31A	Protein transport protein Sec31A	1	EQT(0.059)LS(0.136)PT(0.765)IT(0.04)SGLHNIAR	151.64	1.0965e-10	99799000.0	3547.7	2611.4	3810.8	3147.5	3162.5	2624.1	3000.2	3635.7	3760.0	4668.4	True	False	3391.747355896035	3042.889463789528	3010.965157663296	2871.5635618090027	3578.4241820758166	3131.1701866980593	3673.071222059084	3507.8303702656212	3585.198420689591	3822.907522279087	0.8872166894254326	0.7959620906486017	0.7876112984988612	0.751146488654027	0.9360478016330571	0.8190546510608142	0.96080566967765	0.9175818012396942	0.9378198137924659	1.0	11.900454585864455	-8.674497291260568	0.8049466135854223	0.9692204085021834	0.8085283812106108	0.5580448779545621	0.053510819175617584	0.48583481595661654	0.6310310197319614	0.04185694176493074	0.027097773876794986	2.1159368825161442e-09	8.674497291260568	-0.16069202729157261	
EQVANSAFVER	ddPTM_K562_Methotrexat_30min_R1	3	EQVANSAFVER	11	0	P08238;Q58FF7	P08238	HSP90AB1;HSP90AB3P	Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3	0	;;	160.72	1.6309000000000001e-06	188803000.0	4399.79	4132.7	5138.6	4735.87	4098.24	3981.5099999999998	3491.2699999999995	5150.5599999999995	4421.43	4927.38	False	True	4206.380499759792	4815.558431110888	4060.0780831239167	4320.68363001252	4637.230393660198	4750.8804580771275	4274.276170068066	4969.4118854348	4215.878684358933	4034.9837347115786	1.0424776842527879	1.1934517578557489	1.0062191944409737	1.0708057117661127	1.149256279218104	1.1774224558099047	1.059304436173543	1.2315816400162056	1.044831642836916	1.0	11.978347142576979	-7.747221215181133	24.802026297862373	1.1227748973960268	1.0813238516573525	0.024578046426804168	0.07780545527483475	674.1748789234323	1176018.2351547533	0.021839332073505562	0.028048339017656986	1.789694011150954e-08	7.747221215181133	-0.04145104573867431	
EQWIQDAEECDR	ddPTM_K562_Methotrexat_30min_R1	2	EQWIQDAEECDR	12	0	O94906-2;O94906	O94906-2	PRPF6	Pre-mRNA-processing factor 6	0	;	150.51	1.9492e-08	11768800.0	3147.5	3043.6	4586.4	3876.7000000000003	2995.1	3366.6000000000004	3375.2	3361.3999999999996	3401.3	3715.5	False	True	3009.1396687100846	3546.5031676456306	3623.7773168644235	3536.835729965039	3389.008147900482	4017.147803261189	4132.174517930078	3243.177656740344	3243.1743053966784	3042.5869460688773	0.9890069608686096	1.165620976658639	1.1910184921901619	1.162443602321619	1.113857453532821	1.32030665827035	1.3581122219922042	1.0659276839830778	1.0659265825047224	1.0	11.571082775167275	-9.492834817132904	24.846045313147663	1.0439511374579262	1.1885138040909924	0.30961424411735816	0.09753674386517391	790.534281603448	653767.7061729081	0.05677461705201389	0.02721124970149256	3.2148830792176187e-10	9.492834817132904	0.14456266663306616	
EQYVPPRS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	EQYVPPRSPK	10	1	X6RLN4;Q71RC2-2;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;Q71RC2-6	X6RLN4	LARP4	La-related protein 4	1	EQYVPPRS(1)PK	117.27	0.0080973	26546000.0	2994.7	2274.8	4620.5	3140.9	2514.5	2025.7	1811.8	2658.7	2452.1	3788.8	True	False	2863.056573752533	2650.6720350112655	3650.7201928684967	2865.542173561844	2845.2008239777497	2417.1378557197727	2218.1422705575114	2565.192014034493	2338.1024062162096	3102.6116057773543	0.9227892296996675	0.8543357570362546	1.1766603934796456	0.9235903611737721	0.9170341587969691	0.7790655624503031	0.7149274715620615	0.8267847671483806	0.7535917166887545	1.0	11.599267391941343	-8.044258313083601	2.665336467299696	0.79825179899155	0.9753730211575568	0.3185676113665509	0.10569587579884912	0.30727779695510876	4.3449620605185455	0.03672447992326727	0.038882090023688906	9.031121538011122e-09	8.044258313083601	0.1771212221660068	
ERALS(ph)PGLEESGLGLLAR	ddPTM_K562_Methotrexat_30min_R1	1	ERALSPGLEESGLGLLAR	18	1	H9KVB4;O15417-2;O15417	H9KVB4	TNRC18	Trinucleotide repeat-containing gene 18 protein	1	ERALS(0.964)PGLEES(0.036)GLGLLAR	67.685	0.022809	5304100.0	1364.0	1277.9	1417.5	1388.0	1355.1	1327.3	872.73	1520.0	1596.3	1560.5	True	False	1304.0401932074851	1489.051254413967	1119.9861212836474	1266.316195009022	1533.319402096739	1583.7819400191804	1068.4619184146466	1466.5407384557975	1522.08836142202	1277.8783284458307	1.020472891807683	1.1652527641070234	0.8764419087111264	0.990952085828961	1.1998946753886799	1.2393839888852274	0.8361217923729259	1.1476372247735198	1.1911058569036068	1.0	10.319534763118966	-7.720899498331709	24.998815924402873	1.103278944001522	1.0143609104958922	0.10516465450314727	0.1272616481327332	390.8742008111183	241029.88360558447	0.03866340421583711	0.049913654532285606	1.9015182662815762e-08	7.720899498331709	-0.08891803350562988	
ERDHS(ph)PTPSVFNS(ph)DEERYR	ddPTM_K562_Methotrexat_30min_R1	1	ERDHSPTPSVFNSDEERYR	19	2	Q6UN15-5;Q6UN15;Q6UN15-3	Q6UN15-5	FIP1L1	Pre-mRNA 3-end-processing factor FIP1	2	ERDHS(0.995)PT(0.005)PS(0.001)VFNS(0.998)DEERY(0.002)R	64.152	0.027963	92903000.0	1886.3	1661.3	2208.6	1836.7	1694.1	1532.8	1561.9	1585.5	2048.1	1692.7	True	False	1803.380510591845	1935.8015877282444	1745.0450423048073	1675.679362660714	1916.9038440647066	1828.9919066235223	1912.195834189082	1529.7370663300442	1952.884278035732	1386.1356274016387	1.3010130285535961	1.396545582885691	1.2589280643308747	1.2088855733416475	1.3829121812978808	1.3194898612136776	1.3795156811412186	1.10359840414577	1.4088695503025805	1.0	10.436852710540357	-14.41380955554152	0.3569093622880338	2.4444397866128922e-11	1.3143939415504562	0.49722141188416125	0.09178056696443261	109.01707901967396	2.597360732013072	81.4696580152121	0.06687331650336906	3.856474326106705e-15	14.41380955554152	1.3143939415260117	
ERDHS(ph)PTPSVFNSDEER	ddPTM_K562_Methotrexat_30min_R1	4	ERDHSPTPSVFNSDEER	17	1	Q6UN15-5;Q6UN15;Q6UN15-3	Q6UN15-5	FIP1L1	Pre-mRNA 3-end-processing factor FIP1	1	ERDHS(0.994)PT(0.006)PSVFNSDEER;ERDHS(0.981)PT(0.018)PSVFNSDEER;ERDHS(0.987)PT(0.013)PSVFNSDEER;ERDHS(0.986)PT(0.013)PS(0.001)VFNSDEER	104.52	0.00069494	171879000.0	4498.2	4041.1499999999996	5712.8	5077.18	4322.77	4247.9800000000005	3781.5800000000004	4681.15	4568.52	6086.4	True	False	4300.464513992598	4708.881349694815	4513.761350031194	4632.07151223048	4891.290024206123	5068.842014286659	4629.695577599556	4516.5113011989215	4356.130502364047	4984.093981578145	0.8628377654770697	0.9447818133244374	0.9056332739139026	0.9293708203238572	0.9813799744316546	1.0170036987708806	0.9288941169070063	0.9061850193621008	0.8740064931489792	1.0	12.283115557172955	-5.0009815222784635	1.0454449491266256	0.9448359434928327	5.55250915360052e-10	0.23927514349086287	0.04262677433646725	36.22437421317629	3.9075408347375697	0.01425045508890871	68.29774716091805	9.977425133974556e-06	5.0009815222784635	-0.9448359429375818	
ERDHS(ph)PTPSVFNSDEERYR	ddPTM_K562_Methotrexat_30min_R1	1	ERDHSPTPSVFNSDEERYR	19	2	Q6UN15-5;Q6UN15;Q6UN15-3	Q6UN15-5	FIP1L1	Pre-mRNA 3-end-processing factor FIP1	1	ERDHS(0.622)PT(0.282)PS(0.096)VFNSDEERYR	46.353	0.03299	32411000.0	1716.6	1486.2	1625.1	1762.8	1455.8	1373.5	1359.8	1395.5	1858.6	2181.4	True	False	1641.140319398803	1731.7692889193504	1284.013718305506	1608.2580609235615	1647.2632171591995	1638.9094361608863	1664.7697646010065	1346.41947402307	1772.194091673849	1786.3273218018157	0.9187231810032627	0.969457986665381	0.7188009177457798	0.9003154356399582	0.9221508270374847	0.917474315125946	0.9319511291591298	0.7537361476758786	0.9920881072827622	1.0	10.802780744893308	-7.497817567104911	24.989988251055244	0.908083184494113	0.8674600684175214	0.05427179994526965	0.08678440620375891	2860.420541742302	2852297.108037198	0.024357843688492965	0.035934452680116497	3.1782088517802386e-08	7.497817567104911	-0.040623116076591526	
ERDRLEQLER	ddPTM_K562_Methotrexat_30min_R1	1	ERDRLEQLER	10	2	P21127;P21127-9;P21127-8;P21127-2;P21127-6;Q5QPR4;Q9UQ88;Q9UQ88-2;Q9UQ88-4;E7ESP2;J3KS35	P21127	CDK11B;CDK11A	Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A	0		101.66	0.015565	6077600.0	890.21	873.74	1072.7	1299.4	919.75	1007.0	908.13	870.69	1147.0	1366.7	False	True	851.0774343073565	1018.1106839593549	847.5549293128529	1185.4836194486481	1040.7132463128005	1201.588498153631	1111.8012695448679	840.0673391882098	1093.6762203539786	1119.1773864062268	0.7604490982794408	0.9096955463231744	0.7573016928392589	1.0592455082168308	0.929891238827313	1.0736354332640987	0.9934093406899113	0.7506114306738604	0.9772143662282754	1.0	10.128223002126221	-7.252811357913675	24.995739151698245	0.9624820591913413	0.8192034558212841	0.38269040898110007	0.09258694864493439	775.8311442135033	2247611.392949378	0.025943868814339143	0.04405104669370577	5.587128270307019e-08	7.252811357913675	-0.14327860337005727	
ERDYPFYER	ddPTM_K562_Methotrexat_30min_R1	1	ERDYPFYER	9	1	A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37	A0A494C001	RBM15	Putative RNA-binding protein 15	0		102.06	0.022647	8499000.0	2824.5	2678.6	3037.5	3194.9	2640.1	2576.3	2347.4	2969.4	2667.3	3405.6	False	True	2700.338361960807	3121.193121584828	2399.97025989353	2914.808077402251	2987.319425485648	3074.133513200795	2873.864204606856	2864.964518928059	2543.297805187594	2788.8128390612737	0.9682752188095034	1.1191834309811322	0.8605705719216964	1.0451788074754373	1.0711796014576556	1.1023090076692135	1.0304973372018078	1.027306127826211	0.9119643202889437	1.0	11.4454354010941	-9.702923230148455	11.283302566209855	0.9560772189085888	1.0301294290717788	0.1384709243175416	0.07177119112205092	1.0019998792656262	189.5856305687884	0.04818014244588909	0.01815615486495516	1.9818773295458305e-10	9.702923230148455	0.07405221016319008	
EREES(ph)EDELEEANGNNPIDIEVDQNK	ddPTM_K562_Methotrexat_30min_R1	2	EREESEDELEEANGNNPIDIEVDQNK	26	1	Q9UKL0	Q9UKL0	RCOR1	REST corepressor 1	1	EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK	113.39	1.0858e-08	59137000.0	2844.2	1878.6599999999999	4797.6	2765.8999999999996	2122.54	2078.8999999999996	1709.0900000000001	2765.8	3128.8	3965.2999999999997	True	False	2719.17237354892	2189.076633239959	3790.649323083194	2523.417841336783	2401.6912137306563	2480.61800279204	2092.3969385070845	2668.5252463296374	2983.342770918508	3247.1457454573842	0.8374038576349472	0.6741541048172482	1.1673788675442571	0.7771187495562634	0.7396314800746218	0.763937992700918	0.6443803581758709	0.8218064280184492	0.9187585050939198	1.0	11.664956424915813	-9.904323180432964	2.979611285342142	0.9964698921004526	0.800963346549423	0.18875600993862107	0.1349821439049586	0.4062050212719898	7.2293422019946085	0.1324462867631272	0.03577194208177839	1.2464556185326988e-10	9.904323180432964	-0.19550654555102953	
ERERDHS(ph)PTPSVFNSDEER	ddPTM_K562_Methotrexat_30min_R1	1	ERERDHSPTPSVFNSDEER	19	2	Q6UN15-5;Q6UN15;Q6UN15-3	Q6UN15-5	FIP1L1	Pre-mRNA 3-end-processing factor FIP1	1	ERERDHS(0.739)PT(0.243)PS(0.018)VFNSDEER	79.565	0.0041466	24438000.0	1278.7	1148.5	1439.5	1324.3	1205.7	915.48	1395.1	1404.1	1489.7	1585.4	True	False	1222.4898790721484	1338.2701038378925	1137.3686219314366	1208.2006751083923	1364.27068342413	1092.383553415776	1707.9866881856624	1354.717007148544	1420.4441721545975	1298.2686971598969	0.9416308671282587	1.0308113464997677	0.8760656591501846	0.9306245138248052	1.0508384638777932	0.8414156143527786	1.315587976450536	1.0434796819118677	1.0941064629086203	1.0	10.342373287369231	-8.74047958752611	24.99997454130206	1.1169170096960395	0.950113634255277	0.41968884457214695	0.09667523618348219	227.73841246206572	271637.0345080465	0.03535910358898991	0.027359300596082835	1.8176924882850735e-09	8.74047958752611	-0.1668033754407625	
ERERDHS(ph)PTPSVFNSDEERYR	ddPTM_K562_Methotrexat_30min_R1	1	ERERDHSPTPSVFNSDEERYR	21	3	Q6UN15-5;Q6UN15;Q6UN15-3	Q6UN15-5	FIP1L1	Pre-mRNA 3-end-processing factor FIP1	1	ERERDHS(0.5)PT(0.5)PS(0.001)VFNSDEERYR	80.316	0.0011754	72795000.0	491.64	395.42	638.56	643.07	544.08	526.98	495.51	533.78	583.46	507.63	True	False	470.02809427311416	460.75643400921155	504.5349824387198	586.6930515305849	615.6360565956708	628.8114267696135	606.6407310320968	515.006654850616	556.3350719509443	415.6932879647271	1.130708885328448	1.1084047959136356	1.213719338382801	1.4113604152789871	1.4809862810387966	1.5126812122666993	1.4593469478476935	1.238910200768784	1.3383306588249535	1.0	8.699375643298282	-7.072928005726112	3.4864347740687807	1.3751480463413328	1.1236320857499997	0.29211387526554367	0.1414589571138695	0.26144824773362463	6.132191543525655	0.038920081300387335	0.07663035150793153	8.454189811361787e-08	7.072928005726112	-0.2515159605913331	
ERESSANNSVS(ph)PSESLR	ddPTM_K562_Methotrexat_30min_R1	1	ERESSANNSVSPSESLR	17	1	H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726	H0YKH0	TLE3	Transducin-like enhancer protein 3	1	ERESSANNS(0.015)VS(0.962)PS(0.023)ESLR	135.69	2.144e-14	0.0	739.96	734.73	837.22	881.05	628.9	544.43	710.4	690.78	777.21	685.02	True	False	707.4322444030867	856.1316442253496	661.4989632882504	803.8097144183711	711.6113733146182	649.6333923036558	869.7252836980108	666.4848758621685	741.0776767404676	560.9562400204823	1.2611184151855697	1.5262004112728822	1.179234521509373	1.4329276636427495	1.268568423962331	1.1580821211293337	1.5504333879345997	1.1881227595183415	1.321097126423638	1.0	9.131744420915675	-14.62698482289509	0.2849261556552908	1.1725504405653829e-14	1.3454299658213735	0.3463443619787979	0.13295541001041944	108.2258343032799	2.1236705385164325	63.55956298038913	0.14228614525943176	2.3605607252528214e-15	14.62698482289509	1.3454299658213618	
EREVDEDS(ph)EPEREVR	ddPTM_K562_Methotrexat_30min_R1	2	EREVDEDSEPEREVR	15	2	F8WC91;B9A018;Q53GS9-3;Q53GS9	F8WC91	USP39	U4/U6.U5 tri-snRNP-associated protein 2	1	EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR	130.64	0.00076783	442070000.0	3307.2	2687.41	3502.6	3294.2	3197.5	2353.05	2740.9	2957.4	2920.0	3312.1	True	False	3161.819447929468	3131.458824340434	2767.4521258610953	3005.402600575446	3618.0272955533324	2807.743610308246	3355.616596407484	2853.386565729722	2784.249837344044	2712.246595094797	1.165756629079281	1.1545627267092153	1.0203541709172534	1.1080860442449565	1.333959567723921	1.0352095622080082	1.2372092576229043	1.0520380303509946	1.026547454195156	1.0	11.405272637674367	-9.461446222875974	7.830584927857967	1.0215829876386282	1.1469016634501008	0.310358466537743	0.08605388673930944	0.3718537611789177	43.38405667628373	0.04755227088548732	0.02249349706854467	3.4558411936736525e-10	9.461446222875974	0.1253186758114726	
ERGDES(ph)PLGAEGAK	ddPTM_K562_Methotrexat_30min_R1	2	ERGDESPLGAEGAK	14	1	K7EKN5;A0A590UJ23;A0A590UJ36;A6NDB9	K7EKN5	PALM3	Paralemmin-3	1	ERGDES(1)PLGAEGAK;ERGDES(1)PLGAEGAK	97.713	0.0037353	34178000.0	6636.7	4622.7	9753.599999999999	6872.200000000001	4810.7	4400.1	4526.799999999999	6378.6	5765.6	8972.599999999999	True	False	6344.958614560198	5386.522602534979	7706.452650830464	6269.724895778823	5443.391371608578	5250.35705136623	5542.0501326635085	6154.2610225751005	5497.558514448916	7347.575193728324	0.8635445636508857	0.7331020725222054	1.0488429784847209	0.8533053055558353	0.7408418734189884	0.7145700333693463	0.7542692638782439	0.8375907507320508	0.7482139848179399	1.0	12.843052502889	-7.579502353009266	7.94096105864902	0.7854065741394629	0.8807324347105886	0.10780594648228481	0.10415956937586411	0.4661505095613245	57.264625898697865	0.030134456835030462	0.03900081965511689	2.633283676495215e-08	7.579502353009266	0.09532586057112569	
ERGS(ph)PLLGDHAVR	ddPTM_K562_Methotrexat_30min_R1	1	ERGSPLLGDHAVR	13	1	Q9C073;D6RFX7;D6RJ87	Q9C073	FAM117A	Protein FAM117A	1	ERGS(1)PLLGDHAVR	85.469	0.018472	56374000.0	999.12	1041.0	1683.8	1369.5	1203.1	1084.4	1206.2	1128.4	1199.1	1741.2	True	False	955.1998811125092	1213.0075560254636	1330.3933904884695	1249.438061285919	1361.328737851513	1293.944952728698	1476.7210546122471	1088.7135324167918	1143.354102725768	1425.8518074270298	0.6699152577687446	0.8507248437089359	0.9330516562511385	0.8762748378041811	0.9547477029243666	0.9074890854636852	1.0356763914175706	0.7635530752535855	0.8018744281630269	1.0	10.477608331100294	-6.289868641591551	2.8023286465952904	0.9054580091116988	0.6345807400913271	0.4576411823496599	0.07809775444355967	0.36780937930456375	4.172121849424623	0.02060624297881172	0.22130736660891373	5.130165295142407e-07	6.289868641591551	-0.2708772690203717	
ERHPGSFDVVHVK	ddPTM_K562_Methotrexat_30min_R1	1	ERHPGSFDVVHVK	13	1	C9JEH7;P62701;P22090	C9JEH7	RPS4Y1;RPS4X	40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1	0		50.088	0.03307	14248000.0	8485.6	6069.4	11077.0	9443.2	7086.8	6217.9	6772.2	8139.0	8577.9	10496.0	False	True	8112.5831843705455	7072.265187839534	8752.089076161526	8615.329317513833	8018.83841692803	7419.421174448327	8291.038240793452	7852.7467567708845	8179.115301285441	8595.072691680509	0.9438644064317242	0.8228278505061444	1.018268185751704	1.0023567719040853	0.9329576031032015	0.863217966920729	0.9646268901039845	0.9136335477850991	0.9516051340906414	1.0	13.069294125817839	-10.023976475348896	17.26641471516122	1.0000000052950986	0.9329609357404228	0.11924543608172211	0.05530068127446457	72.79282670133695	52424.322813539926	0.05477306018620341	0.01414233612418052	9.462884180658049e-11	10.023976475348896	-0.06703906955467576	
ERLDGENIY(ph)IR	ddPTM_K562_Methotrexat_30min_R1	3	ERLDGENIYIR	11	1	P11171;A0A2R8Y5Z6;A0A2R8Y420;A0A2R8Y5G2;A0A2R8YD30;A0A2R8YCW8;P11171-2;P11171-4;P11171-7;P11171-3;Q4VB86;A0A2R8Y5C8	P11171	EPB41	Protein 4.1	1	ERLDGENIY(1)IR;ERLDGENIY(1)IR;ERLDGENIY(1)IR	176.48	1.1700999999999998e-68	7197300.0	1772.3899999999999	1545.6200000000001	3692.5299999999997	2314.1000000000004	1790.43	1798.48	1724.2	2126.84	1945.36	2059.79	True	False	1694.4778577998622	1801.007433952044	2917.5184144081154	2111.2264458720297	2025.9029275301195	2146.0108065137465	2110.8957406420463	2052.037831695613	1854.9206382108255	1686.7420712268085	1.0045862296939254	1.0677432339386232	1.7296766732605022	1.2516593271053489	1.201074522352212	1.2722815438835295	1.2514632655760702	1.2165688321292158	1.099706155346974	1.0	10.720023664919813	-9.87317559331992	1.6077388793912455	0.9994144126492744	1.2650852233752077	0.17451852679047408	0.18085005762855558	0.6509106858074436	3.632294530321679	0.17880643846647673	0.052889972582570235	1.3391351407616982e-10	9.87317559331992	0.26567081072593324	
ERLELCDER	ddPTM_K562_Methotrexat_30min_R1	4	ERLELCDER	9	1	P07919	P07919	UQCRH	Cytochrome b-c1 complex subunit 6, mitochondrial	0	;;;	128.51	0.005005600000000001	45973600.0	13452.400000000001	11744.800000000001	15670.599999999999	14217.9	12124.5	12078.7	11935.300000000001	13450.400000000001	13461.8	15328.900000000001	False	True	12861.048603448951	13685.428572533983	12381.555211419767	12971.43878171382	13719.084267376507	14412.737827853294	14612.094845890857	12977.341808240702	12835.963856286999	12552.68766992201	1.0245653314760486	1.0902389139599304	0.9863668671600664	1.0333594782888764	1.092920068444732	1.148179434304593	1.1640610545025727	1.0338297382588608	1.0225669748036317	1.0	13.615708673839581	-6.239488723323819	22.534034614205627	1.0679151302248964	1.0245651546985697	0.035316383505133664	0.05699556356841742	5456.351588010429	5601028.6082927175	0.01540647744884119	0.589314391907849	5.761177775555282e-07	6.239488723323819	-0.04334997552632669	
ERLGS(ph)FGSITR	ddPTM_K562_Methotrexat_30min_R1	2	ERLGSFGSITR	11	1	Q14315-2;Q14315	Q14315-2	FLNC	Filamin-C	1	ERLGS(0.985)FGS(0.015)ITR;ERLGS(0.943)FGS(0.056)ITR	112.08	0.004986399999999999	54634000.0	3604.6	4226.0	5117.9	4729.8	4464.5	4551.1	4658.7	5619.0	5932.200000000001	6409.3	True	False	3446.1461000261706	4924.274670282048	4043.7227302416773	4315.14577748824	5051.660003439518	5430.5356642969155	5703.532065264534	5421.376585120484	5656.413316812448	5248.513662613175	0.656594670711093	0.9382227020497661	0.7704510248389739	0.8221652938100151	0.9624934463682722	1.0346806759750558	1.08669471623797	1.0329355954122148	1.0777171748841716	1.0	12.357693205502326	-7.903487388672469	2.154175521188704	1.0519005713014118	0.7995380754493392	0.7524768332266066	0.06769044193945636	0.15055937012776385	1.4245541040815208	0.022583140329761598	0.026373887661765582	1.2488567091826992e-08	7.903487388672469	-0.2523624958520726	
ERPDLEAPAPGS(ph)PFR	ddPTM_K562_Methotrexat_30min_R1	3	ERPDLEAPAPGSPFR	15	1	H0YBA8;Q9NQT8-2;Q9NQT8	H0YBA8	KIF13B	Kinesin-like protein KIF13B	1	ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR	103.73	0.0013376	38670500.0	2679.4	2362.5	3273.0699999999997	2979.1099999999997	2296.6000000000004	2448.42	2148.3999999999996	2480.02	2699.6800000000003	2998.46	True	False	2561.616784222972	2752.8629693661464	2586.0973361480537	2717.9360516666616	2598.6431546419967	2921.5425130579097	2630.2333889313163	2392.796290911283	2574.1724660551263	2455.4098383285373	1.0432542642114413	1.121141948034261	1.0532243113876578	1.106917472285129	1.0583337714452437	1.189839051490761	1.071199336206043	0.9744997570507916	1.0483677412514703	1.0	11.261748132980513	-9.073037180269042	6.5480227073907935	1.0102613608818156	1.096452949227516	0.45488445747822637	0.042957230485862016	0.21914009205188134	16.1542434636604	0.019641503778188282	0.011327199898647358	8.452064833160753e-10	9.073037180269042	0.08619158834570029	
ERPES(ph)PMVPSEQVVEEAVPLPPQALTTSQDGHRR	ddPTM_K562_Methotrexat_30min_R1	4	ERPESPMVPSEQVVEEAVPLPPQALTTSQDGHRR	34	2	Q5T1M5-2;Q5T1M5	Q5T1M5-2	FKBP15	FK506-binding protein 15	1	ERPES(0.999)PMVPS(0.001)EQVVEEAVPLPPQALTTSQDGHRR;ERPES(0.995)PMVPS(0.005)EQVVEEAVPLPPQALTTSQDGHRR;ERPES(1)PMVPSEQVVEEAVPLPPQALTTSQDGHRR;ERPES(0.998)PMVPS(0.002)EQVVEEAVPLPPQALTTSQDGHRR	107.01	6.1937e-15	141204000.0	2570.0199999999995	2346.3509999999997	2930.38	2935.4000000000005	2067.88	2642.91	2815.5899999999997	2613.84	2852.7299999999996	3188.73	True	False	2457.0449980550575	2734.045621602213	2315.333284012116	2678.058039502509	2339.8424656540496	3153.6149529843256	3447.0577301904327	2521.9097656613835	2720.10720496112	2611.22009757454	0.9409566816436923	1.047037599067869	0.8866863755233573	1.0255964412919663	0.8960724788490398	1.2077170193020477	1.320094668922114	0.9657974706934458	1.041699704857404	1.0	11.350508351005526	-8.256513015352766	24.999610307924648	1.118238671179358	0.9637982856220549	0.3216447829962673	0.10659817770022421	524.3106012885967	2660698.843052101	0.03717154092974763	0.0360452565144972	5.539709417583438e-09	8.256513015352766	-0.154440385557303	
ERPISMINEASNYNVTSDYAVHPMS(ph)PVGR	ddPTM_K562_Methotrexat_30min_R1	1	ERPISMINEASNYNVTSDYAVHPMSPVGR	29	1	B4DJX4;Q9HAU0-5;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;F5H1X3;Q9HAU0-3	B4DJX4	PLEKHA5	Pleckstrin homology domain-containing family A member 5	1	ERPISMINEASNY(0.002)NVT(0.036)S(0.029)DY(0.105)AVHPMS(0.828)PVGR	65.134	0.00017865	14968000.0	725.42	668.44	1022.6	853.98	750.9	675.33	644.01	929.84	845.91	1011.0	True	False	693.5314053933818	778.8883484626913	807.9702346558428	779.1128992894852	849.65651172197	805.8279647051555	788.4456361970099	897.1370001616708	806.5838287355144	827.8981032096984	0.8377014063743025	0.9408021898383387	0.9759295637028316	0.9410734198676423	1.0262815054508712	0.9733419627137946	0.9523462285277207	1.0836321483085158	0.9742549543336914	1.0	9.69330940310277	-4.868337936528351	0.6497011111969032	1.0017384518280241	7.102125755375919e-12	0.6203102085851675	0.0372503193324023	11.234615699899202	0.8754836048376541	0.01563502146283056	12.509905819035543	1.3541353122144352e-05	4.868337936528351	-1.001738451820922	
ERPQDRPEDLDVPPALADFIHQQR	ddPTM_K562_Methotrexat_30min_R1	1	ERPQDRPEDLDVPPALADFIHQQR	24	2	Q01780-2;Q01780	Q01780-2	EXOSC10	Exosome component 10	0		44.312	0.022553999999999998	4477500.0	1470.7	1078.0	2038.1	1726.2	1460.3	1293.7	1320.3	1710.9	1820.8	1968.8	False	True	1406.0497889664573	1256.1211771329974	1610.3306622844448	1574.866726098397	1652.3550460348806	1543.6892155524863	1616.410884102595	1650.7266772526489	1736.1514054233007	1612.2312419379361	0.8721142181045665	0.7791197344762487	0.998821149470341	0.9768243445061726	1.0248871272638997	0.9574862311295612	1.0025924582379602	1.0238771178186823	1.076862524594431	1.0	10.654842968770552	-6.772111947970188	24.994457057763306	1.0060614631605422	0.8256169849692959	0.7991297492977364	0.036502253151062175	74.14676252601728	173647.8690951316	0.00952965633380566	0.020165090596609307	1.690005243301264e-07	6.772111947970188	-0.18044447819124632	
ERPSGPES(ph)PVQGPR	ddPTM_K562_Methotrexat_30min_R1	2	ERPSGPESPVQGPR	14	1	A0A669KBI7;Q9UMN6	A0A669KBI7	KMT2B	Histone-lysine N-methyltransferase 2B	1	ERPSGPES(1)PVQGPR;ERPS(0.178)GPES(0.822)PVQGPR	130.27	0.0011378	40655000.0	3436.3999999999996	2850.4	3890.2	3718.8	3049.4	2914.3999999999996	2755.3999999999996	3002.4	3343.0	3786.9	True	False	3285.3399706291784	3321.380151484134	3073.7001827284985	3392.778577809477	3450.44954966703	3477.566553146913	3373.368590514497	2896.803890223479	3187.584659671623	3101.055714188731	1.0594262965341976	1.0710482034512694	0.991178639153412	1.0940721130181512	1.1126693189934203	1.1214137615249784	1.0878129583676333	0.9341347454575847	1.027903060589006	1.0	11.598543730593834	-9.244543289915725	24.7668258757457	0.9857641758482325	1.0770479241632163	0.5120495793773849	0.040008646675358875	585.1945702778403	857799.2642012195	0.020108937805591157	0.011569244831829292	5.694514591093596e-10	9.244543289915725	0.09128374831498376	
ERPSSAIYPS(ph)DSFRQSLLGSR	ddPTM_K562_Methotrexat_30min_R1	1	ERPSSAIYPSDSFRQSLLGSR	21	2	V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF5;V9GYG5;V9GZ14	V9GYM8	ARHGEF2	Rho guanine nucleotide exchange factor 2	1	ERPSSAIYPS(0.421)DS(0.211)FRQS(0.296)LLGS(0.072)R	72.359	0.020613	23158000.0	287.02	201.87	282.25	271.95	317.62	338.23	342.12	326.21	327.43	281.8	True	False	274.402944468044	235.22558629669592	223.00958217446876	248.10856572961342	359.39259722084415	403.58816060625924	418.84911888902525	314.73700940241173	312.20785076765753	230.7632893021691	1.1891100412801434	1.019337118169969	0.9663997373622657	1.0751647997387133	1.5574080188735893	1.7489270577946543	1.8150595796915094	1.3638954894176631	1.3529355198211022	1.0	7.850269922622029	-7.752242997637402	11.860384888982928	1.5221630112254647	1.0524062991044383	0.4416833686757996	0.22192080386576507	0.31381735319439985	393.09193512691814	0.0673640922345572	0.08393579547335564	1.769118819135889e-08	7.752242997637402	-0.46975671212102643	
ERQAQAQES(ph)EEEEESR	ddPTM_K562_Methotrexat_30min_R1	3	ERQAQAQESEEEEESR	16	1	H0YLQ7;Q9NVM6	H0YLQ7	DNAJC17	DnaJ homolog subfamily C member 17	1	ERQAQAQES(0.998)EEEEES(0.002)R;ERQAQAQES(0.835)EEEEES(0.165)R;ERQAQAQES(0.919)EEEEES(0.081)R	131.48	0.00016438	17038000.0	1487.85	1416.25	2066.55	1704.52	1840.54	1784.35	1353.67	1993.6599999999999	2410.6800000000003	2279.09	True	False	1422.4458955012865	1650.2612403660557	1632.8093960766992	1555.0873780380257	2082.6032708546477	2129.1503839924862	1657.2649560578348	1923.5418477827534	2298.6080129755283	1866.3247161663614	0.7621642060354581	0.88423050183672	0.8748795865655529	0.8332351624385858	1.1158847401070413	1.1408252623723474	0.887983179830593	1.030657650901137	1.2316227680342384	1.0	10.865984302816935	-7.7549276587059275	24.97104398634088	1.0640193502171877	0.8444741284167843	0.6046627713663573	0.09071196720483556	114.10221284416988	437554.94898610754	0.027820667132296684	0.03506185290256195	1.758216459174372e-08	7.7549276587059275	-0.21954522180040348	
ERS(ph)DSGGSSSEPFDR	ddPTM_K562_Methotrexat_30min_R1	1	ERSDSGGSSSEPFDR	15	1	P48634-2;P48634-3;P48634;P48634-4	P48634-2	PRRC2A	Protein PRRC2A	1	ERS(0.514)DS(0.432)GGS(0.018)S(0.018)S(0.018)EPFDR	123.72	0.0012743000000000001	33856000.0	971.79	657.62	1119.7	1055.0	1043.3	779.89	601.29	1156.8	1136.8	1444.5	True	False	929.0712751884905	766.2805273712443	884.6902716058548	962.5097879931689	1180.5122368884413	930.5927048908003	736.1445887313866	1116.114688319518	1083.9504161276407	1182.8870525088116	0.7854268699771483	0.6478053215190941	0.7479076465749587	0.8136954292903623	0.997992356400103	0.7867130702944845	0.622328722907298	0.9435513610131462	0.9163600310178948	1.0	10.20809660976437	-10.676774770548828	0.03756652092831788	1.8166053209958368	7.017617555444856e-08	0.3333229079457999	0.10472748008203339	231.06343121341177	3.2638174461768727	86.86862490325039	70.0881778400201	2.104869763215409e-11	10.676774770548828	-1.8166052508196613	
ERS(ph)PS(ph)PLRGNVVPSPLPTR	ddPTM_K562_Methotrexat_30min_R1	1	ERSPSPLRGNVVPSPLPTR	19	2	Q9Y2V2;H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9	Q9Y2V2	CARHSP1	Calcium-regulated heat stable protein 1	2	ERS(0.999)PS(1)PLRGNVVPS(0.002)PLPTR	117.27	0.0010152999999999998	39742000.0	2662.0	2393.6	3764.0	2576.9	2252.8	2121.4	2404.3	2921.9	2770.5	2708.2	True	False	2544.981667388799	2789.1017157565316	2973.9878381034546	2350.987177895352	2549.0826869187013	2531.3305262990198	2943.5254780336827	2819.1351208513156	2641.700059712904	2217.7187370054453	1.1475673740418735	1.2576444745750837	1.341012179984189	1.0600925801212544	1.149416580373349	1.141411886034313	1.327276281215121	1.2711869516230694	1.1911790325945277	1.0	11.114860691434147	-7.246600107003975	24.9436453102873	1.179624226261571	1.2496316329043295	0.12106757401110047	0.0990330609439316	2105.7753572757188	3539639.1070423517	0.02781319093992382	0.04789464548655923	5.667609153000145e-08	7.246600107003975	0.07000740664275851	
ERS(ph)YELVR	ddPTM_K562_Methotrexat_30min_R1	2	ERSYELVR	8	1	A0A3B3ISE6;A0A3B3ITA8;A0A3B3ITJ7;A0A3B3ITE7;A0A3B3IT25;A0A3B3IS40;Q9UGL1;Q9UGL1-2	A0A3B3ISE6	KDM5B	Lysine-specific demethylase 5B	1	ERS(1)YELVR;ERS(1)YELVR	83.883	0.020779	14876900.0	2774.8	2465.7	2693.0	2530.6	2153.0	2334.1	2298.4	2492.2	2689.1	2828.4	True	False	2652.8231144517063	2873.1150152660766	2127.776102022479	2308.7462270099663	2436.157237631376	2785.131791003367	2813.874707279712	2404.5479134075918	2564.084327945847	2316.149352243632	1.1453592627271387	1.2404705303148595	0.9186696444947827	0.9968036926347196	1.0518135349395725	1.2024836776201138	1.2148934629599502	1.0381661748532445	1.1070461952127753	1.0	11.177512570283717	-10.061424844900342	0.006394565359694944	5.295582767164579e-05	2.1612045027082765	0.043575684705571605	0.09997674557299159	22736.243835486406	90.74917819203068	15473.815557889942	15187.657982954399	8.681107917457775e-11	10.061424844900342	2.1611515468806046	
ERSDS(ph)GGSSSEPFDR	ddPTM_K562_Methotrexat_30min_R1	1	ERSDSGGSSSEPFDR	15	1	P48634-2;P48634-3;P48634;P48634-4	P48634-2	PRRC2A	Protein PRRC2A	1	ERSDS(0.773)GGS(0.076)S(0.076)S(0.076)EPFDR	108.36	0.0035774	17938000.0	2989.3	2449.8	3063.8	2873.0	2377.5	2326.7	2396.3	3322.1	2641.7	3243.9	True	False	2857.893951286755	2854.5878105198667	2420.750249304295	2621.128550620261	2690.1829226514615	2776.3018457339176	2933.731274388432	3205.259860015793	2518.8879435999197	2656.3982759663104	1.0758529611856291	1.0746083659015557	0.9112904006925338	0.9867227269099099	1.0127182158604817	1.0451376477888996	1.1044018891787744	1.2066187096322463	0.9482342939270396	1.0	11.375255752011427	-8.478037185626672	3.5020624767685375	1.0816805324604766	1.0090859060933333	0.07670306757101386	0.07715265465047405	0.47461835406807484	11.850884032085744	0.03005205349338719	0.02484438375968496	3.3263107118128403e-09	8.478037185626672	-0.07259462636714331	
ERT(ph)SSLTQFPPSQSEER	ddPTM_K562_Methotrexat_30min_R1	1	ERTSSLTQFPPSQSEER	17	1	B7Z7F3;Q9H6Z4-3;Q9H6Z4-2;Q9H6Z4	B7Z7F3	RANBP3	Ran-binding protein 3	1	ERT(0.91)S(0.044)S(0.044)LT(0.002)QFPPSQSEER	70.335	0.028983	0.0	495.29	579.8	534.32	558.8	505.57	463.6	537.54	728.82	474.59	575.84	True	False	473.51764464350066	675.6020950850756	422.1735339148348	509.81087159296925	572.0613165951207	553.1841387726156	658.0970284333175	703.1869875008917	452.5264144880514	471.549795996313	1.0041731513063852	1.4327269374756724	0.895289399972799	1.0811389930003392	1.213151445408734	1.1731192409993978	1.3956045236810222	1.4912253031838656	0.9596577462872864	1.0	8.881266318349757	-7.9163321738303996	3.706481728767455	1.242711545064513	1.1126174517307172	0.041206909580056905	0.19795282917706722	0.6359364975707928	17.150031198031847	0.06359710499850675	0.07246618533823102	1.2124611345075142e-08	7.9163321738303996	-0.13009409333379574	
ERVDDSTGTVIS(ph)DVEEDAGELSR	ddPTM_K562_Methotrexat_30min_R1	6	ERVDDSTGTVISDVEEDAGELSR	23	1	Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8;S4R403	Q9Y2D8-2	SSX2IP	Afadin- and alpha-actinin-binding protein	1	ERVDDSTGTVIS(1)DVEEDAGELSR;ERVDDSTGTVIS(1)DVEEDAGELSR;ERVDDSTGTVIS(1)DVEEDAGELSR;ERVDDSTGTVIS(1)DVEEDAGELSR;ERVDDSTGTVIS(1)DVEEDAGELSR;ERVDDSTGT(0.004)VIS(0.996)DVEEDAGELSR	215.46	1.1886999999999999e-35	366081200.0	9036.55	7797.370000000001	10648.33	9146.529999999999	8142.55	8219.63	7750.039999999999	7914.14	9082.140000000001	10139.890000000001	True	False	8639.314082059454	9085.752859871536	8413.391051039365	8344.667915803939	9213.438047039186	9807.957166910159	9488.1837523521	7635.795210422745	8659.91329374515	8303.457663456966	1.0404477787705926	1.0942131854127957	1.0132394710779595	1.0049630231184699	1.109590536914157	1.1811895194064044	1.1426786450792716	0.9195922373431776	1.042928578037668	1.0	13.01949650246765	-9.258992687592205	24.999145721083835	0.9859453075117596	1.0831600843638425	0.35948360672963076	0.05886284671424048	265.26680632957755	2710405.6439222153	0.032077961094528436	0.01737653149649269	5.508169706756724e-10	9.258992687592205	0.09721477685208291	
ERVRGFLTQT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	ERVRGFLTQTR	11	2	H0YDP2;H7C0C9;H0YCD6;J3KP97	H0YDP2	CCDC18		1	ERVRGFLT(0.235)QT(0.765)R	99.669	0.033939	2836900.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
ERY(ph)FDRVDENNPEY(ph)LRER	ddPTM_K562_Methotrexat_30min_R1	1	ERYFDRVDENNPEYLRER	18	3	E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;P35611;P35611-3;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25	E7EV99	ADD1	Alpha-adducin	2	ERY(1)FDRVDENNPEY(1)LRER	41.386	0.034033	0.0	0.0	172.43	0.0	123.45	134.53	151.3	153.88	180.07	204.64	0.0	True	False	0.0	200.92112669113422	0.0	112.62733016848976	152.22305303230334	180.53658368485054	188.39150711634272	173.73683603535235	195.12633106646751	0.0											0.0														
ES(ph)ASS(ph)SS(ph)S(ph)VKKAK	ddPTM_K562_Methotrexat_30min_R1	1	ESASSSSSVKKAK	13	2	Q9NPF5	Q9NPF5	DMAP1	DNA methyltransferase 1-associated protein 1	4	ES(0.715)AS(0.285)S(0.514)S(0.514)S(0.979)S(0.993)VKKAK	60.549	0.03119	0.0	1032.0	1060.8	1370.3	1121.2	960.29	916.88	868.41	929.51	1080.9	1049.1	True	False	986.634515681909	1236.0791694830093	1082.6927562574822	1022.9061367752992	1086.5849668950468	1094.054083601889	1063.1730484462132	896.8186064487171	1030.6491949264303	859.09782401315	1.1484542133665174	1.438810732529674	1.2602671383799358	1.190674808134122	1.2647977174697334	1.2734918574129024	1.2375459682574397	1.0439074356624023	1.1996878191495155	1.0	9.746678607731265	-9.648652660056573	0.5529092019534709	1.0031170380667256	1.2858358280496067	0.4746726372236688	0.08528246733365416	0.6691578170083835	0.49467919719341097	0.08597277144931746	0.04503012770316007	2.2456772530032987e-10	9.648652660056573	0.28271878998288114	
ES(ph)SPLY(ph)SPTFSDSTSAVKEK	ddPTM_K562_Methotrexat_30min_R1	1	ESSPLYSPTFSDSTSAVKEK	20	1	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	2	ES(0.435)S(0.455)PLY(0.715)S(0.35)PT(0.045)FS(0.001)DSTSAVKEK	81.14399999999999	0.009876399999999999	11391000.0	1382.3	937.68	2562.5	2166.0	815.79	982.18	880.71	1160.4	1198.6	1851.5	True	False	1321.5357471192863	1092.615682165184	2024.6662686344594	1976.110142931946	923.0806841092899	1171.9723844255554	1078.2316365507818	1119.5880742790193	1142.877347616634	1516.1754085981765	0.8716245756427022	0.7206393640003653	1.335377329794857	1.3033519286261313	0.6088218281832909	0.7729794176711625	0.7111523049616613	0.7384291210171827	0.7537896612327423	1.0	10.566220955371385	-7.774548679960171	24.999915731200378	0.7489038959978748	1.0534997801347266	0.3565514141263051	0.1925010687848658	267.31398862675206	509775.6532462417	0.06361277842780097	0.0725569351421794	1.6805495427718862e-08	7.774548679960171	0.3045958841368518	
ES(ph)SPLYSPTFSDSTSAVK	ddPTM_K562_Methotrexat_30min_R1	1	ESSPLYSPTFSDSTSAVK	18	0	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	ES(0.5)S(0.5)PLYSPTFSDSTSAVK	140.81	1.4585000000000001e-15	0.0	1089.5	769.49	1899.9	1121.3	827.34	973.37	810.33	1306.3	1217.6	1418.1	True	False	1041.6068845304653	896.6351434063727	1501.136953669702	1022.9973699305593	936.149711556871	1161.4599766115198	992.0671299817133	1260.356688582112	1160.9940417637365	1161.2683483300434	0.8969562341282644	0.7721170948091152	1.2926701703601973	0.8809310711014177	0.8061441723638613	1.0001650163648668	0.8542961938197582	1.0853276853662308	0.9997637870982178	1.0	10.1814856763922	-9.270738173430987	24.605614447351982	1.0319092939724501	0.933148744546461	0.09720232097179138	0.13819101600652184	1444.2160413592544	3821523.9008215377	0.074809422870679	0.036761346074962856	5.361197748967774e-10	9.270738173430987	-0.09876054942598911	
ES(ph)SPSHGLLK	ddPTM_K562_Methotrexat_30min_R1	1	ESSPSHGLLK	10	0	Q96JH7	Q96JH7	VCPIP1	Deubiquitinating protein VCIP135	1	ES(0.588)S(0.328)PS(0.084)HGLLK	146.71	3.486e-24	0.0	3644.4	2527.8	5719.2	3712.3	2630.3	2846.5	2429.1	3207.7	3942.8	5200.9	True	False	3484.196539681346	2945.4759847465584	4518.818077492371	3386.8484227175754	2976.2305537119405	3396.54583912047	2973.88750933395	3094.8833728583318	3759.5000885890754	4258.966612248588	0.8180849621269537	0.6915940538898586	1.0610127969767273	0.7952277467912424	0.698815187973637	0.7975046879569715	0.6982650441027618	0.7266747205666259	0.8827258888991827	1.0	12.056287704728268	-5.5391342615102594	18.913995244105084	0.8049669307173076	0.8141516476341677	0.0	0.12312717949465457	2833393.3706911504	0.1169334821623863	0.028459780779044073	15694546.302964017	2.8897863709862883e-06	5.5391342615102594	0.00918471691686007	
ESAAPAAAPTAEAPPPS(ph)VVTRPEPQALPSPAIR	ddPTM_K562_Methotrexat_30min_R1	2	ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR	33	1	A0A1X7SBZ2;A0A5H1ZRQ2;Q92841	A0A1X7SBZ2	DDX17	Probable ATP-dependent RNA helicase DDX17	1	ESAAPAAAPT(0.004)AEAPPPS(0.391)VVT(0.391)RPEPQALPS(0.215)PAIR;ESAAPAAAPT(0.008)AEAPPPS(0.372)VVT(0.372)RPEPQALPS(0.248)PAIR	71.528	8.2265e-06	88406000.0	2250.2	1622.1	1568.07	1405.25	1680.05	1694.69	1401.09	2083.68	2574.8	2176.5	True	False	2151.283902313404	1890.1244540143182	1238.9535359444437	1282.0539142913742	1901.0060227973024	2022.1648579304656	1715.3200981650427	2010.3957933589325	2455.0981099977553	1782.3147592837865	1.2070168252311873	1.0604885832701372	0.695137337269378	0.719319585731625	1.0665938846633416	1.1345722451084126	0.9624114311067786	1.1279689981172567	1.3774772930592367	1.0	10.799536425987656	-7.9801092776887455	24.68219802590676	1.1166020559560237	0.9117140691494322	0.23049654202179848	0.17295592053875247	330.926937574499	410641.59030696336	0.05775770906633582	0.06548303982685044	1.04686510147882e-08	7.9801092776887455	-0.20488798680659148	
ESAAPAAAPTAEAPPPSVVTRPEPQALPS(ph)PAIR	ddPTM_K562_Methotrexat_30min_R1	2	ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR	33	1	A0A1X7SBZ2;A0A5H1ZRQ2;Q92841	A0A1X7SBZ2	DDX17	Probable ATP-dependent RNA helicase DDX17	1	ESAAPAAAPT(0.021)AEAPPPS(0.136)VVT(0.351)RPEPQALPS(0.493)PAIR;ESAAPAAAPT(0.009)AEAPPPS(0.304)VVT(0.304)RPEPQALPS(0.383)PAIR	65.165	6.527800000000001e-05	238660000.0	4888.3	3483.6000000000004	3696.8	3213.0	3544.5	3240.3	3149.9	4403.5	4744.4	4726.9	True	False	4673.4161850851515	4059.205688924405	2920.8921997611183	2931.321278504316	4010.663877744737	3866.4421157569122	3856.345257770784	4248.626409072438	4523.833879553111	3870.812605402495	1.2073475679402466	1.0486701637942817	0.7545940600907488	0.7572883467448333	1.0361296933225472	0.9988709115911519	0.9962624520723325	1.0976058110234084	1.168703923625544	1.0	11.918420749925842	-8.922957557281551	1.5112986323273836	1.0990086671989896	0.9474007225132918	0.13592397821805757	0.13256363182096637	0.8029386301964381	3.6231696701947653	0.0941256372747948	0.04846181008636938	1.1941047962008206e-09	8.922957557281551	-0.15160794468569783	
ESAS(ph)PTIPNLDLLEAHTK	ddPTM_K562_Methotrexat_30min_R1	3	ESASPTIPNLDLLEAHTK	18	0	O75151	O75151	PHF2	Lysine-specific demethylase PHF2	1	ES(0.046)AS(0.947)PT(0.007)IPNLDLLEAHTK;ES(0.191)AS(0.579)PT(0.23)IPNLDLLEAHTK;ES(0.02)AS(0.979)PT(0.002)IPNLDLLEAHTK	188.26	4.8797e-13	37321600.0	9655.599999999999	6715.8	12703.800000000001	9936.599999999999	6998.5	6340.9	6526.4	8355.9	8783.1	11144.099999999999	True	False	9231.151385288997	7825.47180091817	10037.445987698902	9065.473705566752	7918.925419211884	7566.1891836567665	7990.111333793208	8062.018260830796	8374.775598074137	9125.795501463104	1.0115448438230947	0.8575111944666678	1.0998981936522285	0.9933899684814675	0.8677517941249366	0.829099137981309	0.8755523102081549	0.8834318344672794	0.9177036233971537	1.0	13.155734609678323	-7.756986794202935	24.992225692249377	0.8854349645497879	0.9888887334977224	0.3051998013729501	0.06918904234737998	130.51468305579152	732569.91793768	0.020481124669959425	0.02553493839802759	1.7498998978468813e-08	7.756986794202935	0.10345376894793457	
ESASPT(ph)IPNLDLLEAHTK	ddPTM_K562_Methotrexat_30min_R1	1	ESASPTIPNLDLLEAHTK	18	0	O75151	O75151	PHF2	Lysine-specific demethylase PHF2	1	ES(0.064)AS(0.213)PT(0.722)IPNLDLLEAHTK	83.359	0.015684	3884000.0	1554.7	1294.4	2232.9	1636.7	999.31	823.74	986.23	1504.6	1513.8	2000.4	True	False	1486.3572495452177	1508.2775989619222	1764.244804383954	1493.2130521406814	1130.7367808348404	982.9160967915313	1207.4171826316012	1451.6823651846016	1443.423768414868	1638.1081757276754	0.9073620848543489	0.9207435878231423	1.0770014035246767	0.9115472801284145	0.6902699086600602	0.6000312502896235	0.7370802493524251	0.8861944447226385	0.8811528993032921	1.0	10.677814916019965	-7.579966902244764	6.800293586697299	0.7811896355349611	0.9686481803663305	0.30933237965529126	0.1139199619282841	0.23829980117997415	22.32479339782895	0.03572703342467542	0.04638412142212238	2.630468453303937e-08	7.579966902244764	0.18745854483136937	
ESDMEHS(ph)PSATEDSLQPATDLLTR	ddPTM_K562_Methotrexat_30min_R1	2	ESDMEHSPSATEDSLQPATDLLTR	24	0	E7ET52;Q8WW38-2;Q8WW38	E7ET52	ZFPM2	Zinc finger protein ZFPM2	1	ES(0.008)DMEHS(0.992)PSATEDSLQPATDLLTR;ES(0.05)DMEHS(0.947)PS(0.003)ATEDSLQPATDLLTR	129.43	4.5944999999999996e-11	61645000.0	1499.3899999999999	1351.1399999999999	1840.95	1734.23	1503.33	1504.03	1442.38	1628.81	1716.09	2029.06	True	False	1433.478610918893	1574.3929195468252	1454.5597530702853	1582.1927484657751	1701.04424526167	1794.662511298915	1765.870431729077	1571.5238290817035	1636.3093504684043	1661.577572006597	0.8627214492235585	0.9475289905637787	0.8754088750209191	0.9522232215466455	1.0237525312811073	1.0800955318213634	1.0627673732960485	0.9458022637991313	0.984792632036025	1.0	10.69833793257426	-7.573064443344647	3.4473912919398924	1.0188097351528125	0.9010858330323883	0.634651547801655	0.04120604069956694	0.16710934164385288	4.090469003444458	0.013613597000099223	0.0186906487880147	2.6726098005996062e-08	7.573064443344647	-0.11772390212042416	
ESDQTLAALLS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	4	ESDQTLAALLSPK	13	0	P18583-6;P18583-2;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;H7C1M2	P18583-6	SON	Protein SON	1	ESDQT(0.001)LAALLS(0.999)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK	148.18	9.920100000000001e-09	90663200.0	13117.3	8727.3	18072.9	12402.5	9029.6	8612.15	7759.700000000001	12861.5	13701.8	16276.800000000001	True	False	12540.679198211528	10169.337986264194	14279.645270791692	11315.192081123483	10217.150670188703	10276.326101662165	9500.010253253742	12409.153755032406	13064.806308671443	13328.913794583199	0.9408628033372077	0.762953241575991	1.0713285036470763	0.8489207939601139	0.7665403818832484	0.7709800108271696	0.7127370166588141	0.9309951243045342	0.9801853706924649	1.0	13.70227159605898	-9.508805756775375	20.38825413645358	0.9785925352020726	0.8388364933868193	0.28363443461521487	0.0982420421486006	78.64934541506261	113954.65128445423	0.06005701778692657	0.02683739872521552	3.0988049656385485e-10	9.508805756775375	-0.13975604181525325	
ESEDSETQPFDTHLEAYGPCLS(ph)PPR	ddPTM_K562_Methotrexat_30min_R1	4	ESEDSETQPFDTHLEAYGPCLSPPR	25	0	Q14676;Q14676-3	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	1	ESEDSETQPFDTHLEAYGPCLS(1)PPR;ESEDSETQPFDTHLEAYGPCLS(1)PPR;ESEDSETQPFDTHLEAYGPCLS(1)PPR;ESEDSETQPFDTHLEAYGPCLS(1)PPR	180.11	1.3963e-25	353331500.0	6262.129999999999	5847.96	7361.700000000001	6756.110000000001	5292.57	4958.599999999999	5854.81	6993.540000000001	6561.6	7213.5599999999995	True	False	5986.854263262745	6814.235991675955	5816.579773582944	6163.81232583747	5988.63572279178	5916.779272040315	7167.900180529214	6747.573234223797	6256.552648190644	5907.114383174432	1.0134989564981915	1.153564253146228	0.9846736318752582	1.0434557257591295	1.013800535139382	1.0016361438494255	1.2134351420290674	1.1422790886601573	1.0591554932492142	1.0	12.52823783270546	-8.72386960206997	24.999855625889502	1.115574496153668	1.0376082660846724	0.19018401025491394	0.06749413594777151	242.52646851164894	161382.92155909227	0.025421753346941658	0.019691178044481988	1.8885583080086955e-09	8.72386960206997	-0.07796623006899561	
ESESALMEDRDES(ph)EVS(ph)DEGGSPISSEGQEPR	ddPTM_K562_Methotrexat_30min_R1	1	ESESALMEDRDESEVSDEGGSPISSEGQEPR	31	1	O14976-2;O14976	O14976-2	GAK	Cyclin-G-associated kinase	2	ES(0.02)ES(0.118)ALMEDRDES(0.976)EVS(0.835)DEGGS(0.028)PIS(0.011)S(0.012)EGQEPR	59.302	0.0010741	12869000.0	1931.7	1368.1	2234.6	1915.3	1755.0	1356.3	1535.9	1782.4	2020.2	2112.0	True	False	1846.7847809522705	1594.1552712761159	1765.5879976158285	1747.388622695087	1985.8132615155896	1618.3857795886502	1880.364672342026	1719.7119817260632	1926.2813429460407	1729.4963343015665	1.0678165338222987	0.921745388908207	1.0208683086505859	1.0103453751468898	1.1482032208628723	0.9357555419406038	1.0872325283657718	0.9943426578123078	1.113781685882522	1.0	10.75613624055821	-7.327497126583109	3.2485104032741905	1.0444971977052757	0.9938587453351823	0.06842382147246395	0.06752083452009892	0.598239390341919	12.446368774280892	0.018480749066390655	0.030075803624657227	4.704385182718851e-08	7.327497126583109	-0.050638452370093456	
ESHLIELNIENPDDRRR	ddPTM_K562_Methotrexat_30min_R1	2	ESHLIELNIENPDDRRR	17	2	Q9NSI8;A0A2R8Y4K8;Q9NSI8-3;S6FRS6;Q9NSI8-2	Q9NSI8	SAMSN1	SAM domain-containing protein SAMSN-1	0	;	66.797	0.014990999999999999	28538000.0	3954.2	3539.2	4592.9	3976.1000000000004	4050.7	3365.9	3596.2	4850.9	4305.799999999999	5214.0	False	True	3780.3781026253923	4123.992643885995	3628.913055692177	3627.521486293499	4583.438050382449	4016.3125381681302	4402.739393630047	4680.291097483705	4105.6242978205455	4269.69407530699	0.8853978847076026	0.965875440054679	0.8499234351892667	0.8495975173660846	1.0734816053660472	0.9406558098379351	1.031160386663883	1.0961654429883698	0.9615734114452572	1.0	12.059916988735312	-7.757730719722748	24.999662392799387	1.0188545828543314	0.8905843997280767	0.59026147537518	0.05281391406006947	69.56735851466482	468942.0274502126	0.015949141650639292	0.019787026898192474	1.7469049694619763e-08	7.757730719722748	-0.1282701831262547	
ESIESEIRR	ddPTM_K562_Methotrexat_30min_R1	3	ESIESEIRR	9	1	P55072	P55072	VCP	Transitional endoplasmic reticulum ATPase	0	;;	187.22	1.2535000000000001e-20	103475000.0	8696.1	8407.1	10621.0	10154.0	9039.599999999999	8462.8	8191.900000000001	10046.2	9310.400000000001	10416.099999999999	False	True	8313.829856416129	9796.2303787336	8391.797244552818	9263.814585102024	10228.465845467992	10098.116327879401	10029.142105188259	9692.869451759638	8877.561536167123	8529.643355927341	0.9746984146340373	1.1484923776943259	0.983839170569924	1.086072910500355	1.199166884083157	1.1838849417850643	1.175798528342794	1.136374529073828	1.0407892998243602	1.0	13.058269705057745	-6.252146185414381	24.178644938919184	1.113387277361071	0.9746982986763377	0.21901076705139466	0.07323929141417392	1259.851264886631	3277719.017301796	0.019003281180012238	0.23188351976273158	5.595692163555689e-07	6.252146185414381	-0.13868897868473318	
ESIPAKS(ph)PVPGVDPVVSHSPFDPHHR	ddPTM_K562_Methotrexat_30min_R1	1	ESIPAKSPVPGVDPVVSHSPFDPHHR	26	1	E7EVK1;A0A088AWL3;O75376-2;O75376	E7EVK1	NCOR1	Nuclear receptor corepressor 1	1	ES(0.092)IPAKS(0.907)PVPGVDPVVS(0.001)HSPFDPHHR	55.827	0.0067206	23629000.0	3564.3	2895.3	5385.3	3525.7	2478.3	2658.8	2089.9	2960.6	3423.0	4423.3	True	False	3407.617639772314	3373.6991133146244	4254.99912447889	3216.607355002385	2804.2398894667162	3172.575470596697	2558.613274775439	2856.474019915947	3263.8654771331067	3622.197507346646	0.9407597550550142	0.9313956807910088	1.1747010249575782	0.8880264945460231	0.774181938941506	0.8758703698961714	0.7063704476594623	0.7886025027962621	0.9010733043996745	1.0	11.822649498841077	-7.5105098727072335	24.076459981795313	0.8259703172217486	1.0112244028440818	0.3861279283069673	0.0973970329839978	337.4231275452253	656806.7341077722	0.027339400104763482	0.038287053297366015	3.0866694764053725e-08	7.5105098727072335	0.18525408562233314	
ESIS(ph)PQPADSACSSPAPSTGKVEAALNENTCR	ddPTM_K562_Methotrexat_30min_R1	1	ESISPQPADSACSSPAPSTGKVEAALNENTCR	32	1	H0Y4F4;F8W6D9;Q9GZR1-2;Q9GZR1	H0Y4F4	SENP6	Sentrin-specific protease 6	1	ES(0.032)IS(0.465)PQPADS(0.21)ACS(0.147)S(0.147)PAPSTGKVEAALNENTCR	108.28	2.2240999999999998e-14	13151000.0	1141.8	740.71	1967.5	1505.9	792.63	1027.9	919.84	1117.9	1058.1	1590.6	True	False	1091.6078391527171	863.0997375827292	1554.5486374783604	1373.8800850605817	896.8747381624516	1226.5271273605945	1126.1375351305999	1078.5828233682485	1008.9091619499083	1302.5269267708659	0.8380693072188191	0.6626348521811107	1.1934867568014806	1.0547805629374662	0.688565218675303	0.9416520320246393	0.8645790823859908	0.8280695018276482	0.7745783532100374	1.0	10.347097481900807	-7.745274785730953	24.997021355860788	0.8463316012363699	0.9359310700508342	0.07454469906249028	0.1510407720367051	750.1914711397878	1160095.782832191	0.046683192205998314	0.06008123097119266	1.7977330979668164e-08	7.745274785730953	0.08959946881446434	
ESLCDS(ph)PHQNLSRPLLENK	ddPTM_K562_Methotrexat_30min_R1	1	ESLCDSPHQNLSRPLLENK	19	1	O15042-2;O15042;C9J5L1;E7EW00;H0Y8D9;E7ET15;U3KPT1;C9JDJ7	O15042-2	U2SURP	U2 snRNP-associated SURP motif-containing protein	1	ESLCDS(1)PHQNLSRPLLENK	112.57	0.00030107	48925000.0	1160.3	1112.1	2240.2	1181.7	1434.2	1390.2	875.56	1662.9	1526.4	2885.6	True	False	1109.2946013039918	1295.8556225321022	1770.0126341443565	1078.102195707609	1622.8224385559322	1658.8364748095119	1071.926617954153	1604.4148644593065	1455.4379971650512	2362.9898779642995	0.4694453461898203	0.5483966032256022	0.7490563758441534	0.4562449487241931	0.6867665637036005	0.7020074399296999	0.4536314894745173	0.6789766132394522	0.6159306947259976	1.0	11.206397734099964	-15.999999999779746	0.28385741492748656	4.013660534894486	0.5739948839700496	0.5892063337724096	0.10243821374858124	164.99913715055143	1.5740694357816183	293.3425345636375	0.11277140157622119	1.0000000005071536e-16	15.999999999779746	-3.4396656509244363	
ESLLVSVQR	ddPTM_K562_Methotrexat_30min_R1	2	ESLLVSVQR	9	0	J3QRZ1;A6NIZ0;Q9GZM8-3;Q9GZM8;Q9GZM8-2	J3QRZ1	NDEL1	Nuclear distribution protein nudE-like 1	0	;	123.21	0.0052065	12639600.0	12637.6	11327.1	12487.4	13646.0	12256.4	12660.3	11892.4	14144.8	13100.1	13390.3	False	True	12082.066235834973	13198.710747220019	9866.465390417925	12449.676366781787	13868.331429310354	15106.723796598228	14559.573428843221	13647.319366651041	12491.079210339289	10965.186915340075	1.1018568428534863	1.203692271652505	0.8997991066267133	1.135382047100806	1.2647601483116389	1.3776987034725534	1.32779983973412	1.2446043530328441	1.1391578918608785	1.0	13.42064278431388	-7.625150581884919	4.686507043059076	1.2498638204343098	1.0727228187201423	0.24240395785482005	0.1207376486173885	0.2622645724562927	9.765859464581872	0.036244387857680756	0.047318801574841085	2.370551627466553e-08	7.625150581884919	-0.17714100171416747	
ESLPPAAEPS(ph)PVSK	ddPTM_K562_Methotrexat_30min_R1	2	ESLPPAAEPSPVSK	14	0	Q9NWT1	Q9NWT1	PAK1IP1	p21-activated protein kinase-interacting protein 1	1	ESLPPAAEPS(0.713)PVS(0.287)K;ESLPPAAEPS(1)PVSK	123.29	7.3646e-05	12725000.0	5468.0	4104.3	6981.9	4716.4	4214.3	3705.8	2850.6	4990.299999999999	4964.0	5781.6	True	False	5227.6332671983355	4782.465813828348	5516.494603308848	4302.920534683393	4768.554317951652	4421.893402639251	3489.919613892945	4814.788320471032	4733.224723484876	4734.496215150536	1.1041582947029813	1.0101319330500904	1.1651703481472628	0.9088444343695773	1.0071936065113176	0.9339733736588601	0.7371258641468744	1.0169589543790445	0.9997314409795934	1.0	12.20899520527202	-7.274114739139985	24.99345790316887	0.9377806132281103	1.0848513680798497	0.39219638034706805	0.08503972881866058	790.2379582881131	1558199.830857416	0.02461964795974324	0.03679336156950397	5.319676966250445e-08	7.274114739139985	0.14707075485173937	
ESNYFGLS(ph)PEER	ddPTM_K562_Methotrexat_30min_R1	2	ESNYFGLSPEER	12	0	Q01804-5;Q01804-3;Q01804	Q01804-5	OTUD4	OTU domain-containing protein 4	1	ESNYFGLS(1)PEER;ESNYFGLS(1)PEER	158.31	3.6814999999999997e-07	48205000.0	2304.87	1879.73	2393.3	2755.67	1960.33	1868.9699999999998	1825.8899999999999	2111.61	1998.5900000000001	2065.69	True	False	2203.5506745734124	2190.323432553069	1890.9790363796499	2514.084689553683	2218.147755525275	2230.122001384501	2235.392311727705	2037.3434794280586	1905.6759871292577	1691.5735240546405	1.3026632559793092	1.2948437661183907	1.117881670225626	1.4862402690765182	1.3112925474314916	1.3183713091222775	1.3214869350576914	1.2044072873312772	1.1265700012621511	1.0	10.72415016973591	-9.816006004584068	1.4947736282526847	1.0045541324933622	1.3079610575694698	0.5908939872679919	0.08373281313265317	0.26335251530250914	1.2266853905782118	0.0794787621099568	0.024102735541731517	1.5275449381552958e-10	9.816006004584068	0.30340692507610756	
ESPFSTSAS(ph)PLLSGSQHFDVPPR	ddPTM_K562_Methotrexat_30min_R1	4	ESPFSTSASPLLSGSQHFDVPPR	23	0	O14980	O14980	XPO1	Exportin-1	1	ESPFS(0.001)T(0.004)S(0.023)AS(0.955)PLLS(0.011)GS(0.006)QHFDVPPR;ES(0.001)PFS(0.012)T(0.061)S(0.21)AS(0.716)PLLSGSQHFDVPPR;ES(0.001)PFS(0.004)T(0.011)S(0.035)AS(0.925)PLLS(0.021)GS(0.003)QHFDVPPR;ES(0.003)PFS(0.133)T(0.166)S(0.133)AS(0.563)PLLSGSQHFDVPPR	141.93	5.1872000000000004e-14	18369100.0	3468.02	2552.9	4434.13	3823.8199999999997	2123.24	2512.5	2555.27	2915.73	3124.8900000000003	4076.67	True	False	3315.5699932898983	2974.7233331195057	3503.4667089717504	3488.5916374635435	2402.4832760002073	2998.0050661479636	3128.3543435740653	2813.182123248504	2979.61454596508	3338.3455592600217	0.9931775888487794	0.8910771159888203	1.0494619705421777	1.0450061491647453	0.7196628489630481	0.8980511492682327	0.9370972201773794	0.8426875149114504	0.8925422767275003	1.0	11.70491758352904	-7.707823241695089	24.999999901019464	0.8773951605803787	0.9911934097532108	0.3308968319431833	0.078520716280303	113.41847193100308	52883.77404175934	0.023022444220563598	0.029721822770127148	1.959642087584462e-08	7.707823241695089	0.1137982491728321	
ESPRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGR	ddPTM_K562_Methotrexat_30min_R1	5	ESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR	40	1	Q6PKG0;A0A0B4J210	Q6PKG0	LARP1	La-related protein 1	1	ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR	131.4	3.0941e-42	1266805000.0	5806.21	5292.3099999999995	7197.67	5422.860000000001	4914.9800000000005	5155.900000000001	4989.7699999999995	5914.4400000000005	5972.719999999999	6438.96	True	False	5550.975960559552	6166.774273611069	5686.9774289803645	4947.446283333305	5561.386019421021	6152.204704697425	6108.852940368557	5706.425792863493	5695.049550856687	5272.801949201896	1.0527563929079038	1.1695440741036152	1.0785494095489703	0.9382954890012818	1.0547306864546289	1.1667809191332585	1.1585591492381404	1.0822378401159618	1.0800803075333987	1.0	12.364354093579667														
ESPRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGRR	ddPTM_K562_Methotrexat_30min_R1	9	ESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGRR	41	2	Q6PKG0;A0A0B4J210	Q6PKG0	LARP1	La-related protein 1	1	ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGRR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGRR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGRR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGRR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGRR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGRR;ES(0.001)PRPLQLPGAEGPAIS(0.999)DGEEGGGEPGAGGGAAGAAGAGRR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGRR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGRR	89.111	4.922600000000001e-15	2287488500.0	3864.0099999999998	3121.806	4214.95	4044.5400000000004	3316.5000000000005	3059.48	3279.0099999999998	4171.5199999999995	3619.1399999999994	4123.58	True	False	3694.152747034934	3637.6313798709234	3330.2895956998304	3689.961457753452	3752.6778813768983	3650.681209862037	4014.411461850528	4024.805277159955	3450.886971344291	3376.759703692827	1.0939933756598095	1.0772550311746516	0.9862382544004606	1.0927521593313576	1.111325119543735	1.0811196324895875	1.1888353966852794	1.191913440793085	1.0219521891268717	1.0	11.72142380288062	-7.508560572575842	23.367385174195856	1.1114265213431036	1.0523921159013003	0.08026663498168651	0.06366748348858833	546.3542614413407	891655.0312035867	0.018189704133439705	0.02582990742628231	3.1005549130963825e-08	7.508560572575842	-0.05903440544180327	
ESPSSTT(ph)PPIEISSSR	ddPTM_K562_Methotrexat_30min_R1	2	ESPSSTTPPIEISSSR	16	0	Q9HC44	Q9HC44	GPBP1L1	Vasculin-like protein 1	1	ESPS(0.006)S(0.028)T(0.233)T(0.726)PPIEIS(0.005)SS(0.003)R;ESPS(0.002)S(0.056)T(0.038)T(0.898)PPIEISS(0.003)S(0.003)R	132.23	0.00014329	29904000.0	4596.5	3848.0	5226.5	4590.3	3736.2	3780.4	3627.8999999999996	4707.299999999999	4473.0	5067.700000000001	True	False	4394.443363693694	4483.8165951834635	4129.52907434849	4187.875525900514	4227.5757878487475	4510.908796842092	4441.548925574344	4541.741590876961	4265.05120631504	4149.890422982977	1.0589299754413588	1.0804662625189168	0.9950935213802945	1.0091532785316855	1.0187198593089428	1.086994676259334	1.0702810129578604	1.0944244613601912	1.0277503190672888	1.0	12.018857527553902	-8.248128950782833	24.893100757369993	1.0626910563424963	1.0317667643580832	0.08694468115429788	0.0345576419602431	1449.2825305154329	2710449.3452170156	0.011711643078152572	0.011640368317501851	5.647692585412439e-09	8.248128950782833	-0.030924291984413044	
ESQLAHIKDEPPPLS(ph)PAPLTPATPSSLDPFFSR	ddPTM_K562_Methotrexat_30min_R1	2	ESQLAHIKDEPPPLSPAPLTPATPSSLDPFFSR	33	1	Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659	Q7Z6Z7-2	HUWE1	E3 ubiquitin-protein ligase HUWE1	1	ESQLAHIKDEPPPLS(0.697)PAPLT(0.282)PAT(0.016)PS(0.002)S(0.002)LDPFFS(0.001)R;ES(0.001)QLAHIKDEPPPLS(0.906)PAPLT(0.076)PAT(0.009)PS(0.003)S(0.003)LDPFFS(0.001)R	66.429	6.419e-05	46758000.0	5088.8	3271.4	5696.1	4766.7	3654.0	3045.0	3052.4	3947.8999999999996	4511.9	6073.7	True	False	4865.102445157071	3811.943245707688	4500.566451812194	4348.810811779184	4134.565047052973	3633.4031547942473	3736.9784008443226	3809.050119308979	4302.142753805682	4973.694074643664	0.9781668056263849	0.7664209315046767	0.9048739999423131	0.8743623444694377	0.8312865618597963	0.7305240532017562	0.751348664546091	0.7658392458691531	0.8649793672953047	1.0	12.28010205667854	-7.908679563590577	4.380936603041513	0.801372717513383	0.8740527909242751	0.0654961312972201	0.08704432096971389	0.4476612135115094	15.616063814701576	0.02648771350853624	0.03022390295344003	1.2340149932883877e-08	7.908679563590577	0.07268007341089211	
ESS(ph)PLYSPTFSDSTSAVK	ddPTM_K562_Methotrexat_30min_R1	3	ESSPLYSPTFSDSTSAVK	18	0	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	ES(0.137)S(0.863)PLYSPTFSDSTSAVK;ES(0.002)S(0.998)PLYSPTFSDSTSAVK;ES(0.007)S(0.993)PLYSPTFSDSTSAVK	320.0	9.219799999999994e-283	121752000.0	6454.11	4782.63	9745.1	6013.09	4714.85	4190.97	3815.87	5706.0	6150.48	7906.6	True	False	6170.395052333105	5572.878316689783	7699.736684671088	5485.9317356244965	5334.935416556571	5000.815638636469	4671.675982974	5505.316745808413	5864.545527256092	6474.638123479524	0.9530100269166987	0.8607242922937092	1.189214985892244	0.8472954983739401	0.8239743001558723	0.7723699059722876	0.7215346856270946	0.8502894896695492	0.9057719389735462	1.0	12.660583845484283	-7.486884775635848	24.944686191237306	0.828967442869073	0.9921735991109867	0.31036552344117985	0.10392964911011313	648.8643236763166	449678.5544017001	0.028950103566034995	0.04292146265610706	3.2592316147804854e-08	7.486884775635848	0.1632061562419137	
ESSANNSVS(ph)PSESLR	ddPTM_K562_Methotrexat_30min_R1	4	ESSANNSVSPSESLR	15	0	H0YKH0;H0YLW9;H0YLI3;H0YNT2;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726	H0YKH0	TLE3	Transducin-like enhancer protein 3	1	ESSANNS(0.001)VS(0.631)PS(0.281)ES(0.087)LR;ESSANNS(0.003)VS(0.992)PS(0.004)ESLR;ESSANNS(0.011)VS(0.989)PSESLR;ESSANNS(0.001)VS(0.979)PS(0.02)ESLR	285.04	3.0761999999999997e-145	327251000.0	7106.200000000001	7111.200000000001	8713.7	7897.4	7014.7	6139.299999999999	6707.499999999999	7973.0	7775.999999999999	9084.099999999999	True	False	6793.819956723629	8286.20493026732	6884.8134497561305	7205.047203504507	7937.256003164336	7325.632836856596	8211.82761881251	7692.585070860584	7414.495457255919	7438.881463271234	0.9132851478098509	1.1139046873081209	0.9255172950058741	0.9685659381828758	1.0669958974818698	0.9847761216556828	1.1039062336666638	1.0341050746462337	0.9967218181744503	1.0	12.86086999353478	-7.749843247807763	24.991328374060494	1.034115145977363	0.9859457968179681	0.14106286536810575	0.06046081337151623	468.45864701107746	1009591.7474332666	0.01732554816401494	0.022176689172415963	1.77892136962812e-08	7.749843247807763	-0.04816934915939486	
ESSHNSS(ph)FELIGSTIPSYQPCNR	ddPTM_K562_Methotrexat_30min_R1	2	ESSHNSSFELIGSTIPSYQPCNR	23	0	E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4	E7ESG2	CLSPN	Claspin	1	ES(0.022)S(0.022)HNS(0.227)S(0.728)FELIGSTIPSYQPCNR;ES(0.034)S(0.029)HNS(0.238)S(0.699)FELIGSTIPSYQPCNR	150.22	9.883999999999999e-18	214650000.0	3741.8	3115.0	4318.700000000001	4078.3	3189.3	2953.9	3412.5	3785.3999999999996	3809.2	3963.2	True	False	3577.3149523048146	3629.700804053141	3412.2638885274714	3720.761770969234	3608.7488518243135	3524.6993691122275	4177.839992426046	3652.2653364148564	3632.1111234284003	3245.4260758068003	1.102263576105491	1.118405016558823	1.051407059912525	1.1464632637008276	1.1119491763272384	1.086051349432139	1.2873009259307966	1.125357734579401	1.1191476985115034	1.0	11.664192179558755	-7.717209133797079	1.492704906690046	1.1387116403049764	1.096275184709949	0.004472068777032545	0.06990881231297269	1.3008220338458683	6.022692415648257	0.025684206973699653	0.03673947384990489	1.9177450313011567e-08	7.717209133797079	-0.0424364555950274	
ESSIIAPAPAEDVDT(ph)PPR	ddPTM_K562_Methotrexat_30min_R1	4	ESSIIAPAPAEDVDTPPR	18	0	Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2	Q15910-5	EZH2	Histone-lysine N-methyltransferase EZH2	1	ES(0.001)S(0.004)IIAPAPAEDVDT(0.995)PPR;ESSIIAPAPAEDVDT(1)PPR;ESSIIAPAPAEDVDT(1)PPR;ESSIIAPAPAEDVDT(1)PPR	293.35	4.330299999999999e-177	279239000.0	12821.699999999999	10785.3	14247.800000000001	11848.1	12158.5	10093.2	10561.2	13679.4	12615.6	14177.9	True	False	12258.073420270093	12567.387506245375	11257.381487707336	10809.395468361963	13757.555863326104	12043.568053191886	12929.817942273981	13198.287748442262	12029.103509588202	11610.144923340034	1.0558070981204997	1.0824488056975916	0.9696159317595138	0.9310301929678488	1.184959873814245	1.0373314142686139	1.113665507850896	1.1367892335184864	1.0360855604313715	1.0	13.503098360269643	-7.755543948136533	24.99999943102603	1.0907140449376518	1.0120550821206367	0.24566712718292416	0.0638988604926687	204.19537589653595	865900.219127447	0.01911392747750251	0.024007883528676152	1.7557232159852287e-08	7.755543948136533	-0.07865896281701512	
ESSIIAPAPAEDVDT(ph)PPRKK	ddPTM_K562_Methotrexat_30min_R1	2	ESSIIAPAPAEDVDTPPRKK	20	2	Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2	Q15910-5	EZH2	Histone-lysine N-methyltransferase EZH2	1	ESSIIAPAPAEDVDT(1)PPRKK;ESSIIAPAPAEDVDT(1)PPRKK	80.361	0.004391	39417000.0	12112.1	7471.7	17807.6	13632.3	7748.7	6933.9	6681.9	10572.8	10687.5	16329.900000000001	True	False	11579.666586619041	8706.271427815043	14070.028115252688	12437.177424511168	8767.789868664306	8273.778041060044	8180.486167147714	10200.948631279909	10190.64045774468	13372.39687003369	0.865937998936302	0.6510628956372807	1.0521694990059953	0.9300634392912566	0.6556633005943845	0.6187206468274076	0.6117441956482335	0.7628362163060907	0.7620653617139472	1.0	13.706970456991996	-7.762071067898537	24.999995088628	0.7113195057765523	0.8714952847171614	0.18195315447509086	0.1395878601838914	26.019036186171398	1029764.8568474096	0.042665689246327076	0.05134545209701612	1.7295333154264076e-08	7.762071067898537	0.16017577894060908	
ESSPTS(ph)PVAETEGTIMEESSR	ddPTM_K562_Methotrexat_30min_R1	1	ESSPTSPVAETEGTIMEESSR	21	0	Q8IWV8-4;Q8IWV8	Q8IWV8-4	UBR2	E3 ubiquitin-protein ligase UBR2	1	ESS(0.004)PT(0.108)S(0.49)PVAET(0.366)EGT(0.031)IMEESSR	89.13600000000001	0.00078692	10721000.0	1837.8	1353.9	2266.4	1784.1	1681.4	1637.9	1465.9	1965.7	1835.2	2095.7	True	False	1757.0125125195864	1577.6089626348473	1790.713612188542	1627.6907229939457	1902.533571460009	1954.4009941666668	1794.6653904461073	1896.5652168306335	1749.8819525663664	1716.1484222517952	1.0238115128842833	0.9192730315043688	1.043449149834551	0.9484556824392949	1.1086066605845513	1.1388298172964872	1.0457518517490978	1.1051288992487664	1.0196565342934085	1.0	10.744958615347361	-7.762746250922244	24.99999961301505	1.0771815963428186	0.9834064471445065	0.3969658099107871	0.051376463404398734	31.953637357374387	611266.1427921108	0.014935606494031643	0.017878281840725603	1.7268465572005024e-08	7.762746250922244	-0.09377514919831209	
ESTHQSEDVFLPS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	ESTHQSEDVFLPSPR	15	0	A0A0A0MSK6;Q13017-2;Q13017	A0A0A0MSK6	ARHGAP5	Rho GTPase-activating protein 5	1	ESTHQSEDVFLPS(1)PR;ESTHQSEDVFLPS(1)PR	106.75	0.0011515	29659000.0	4279.7	3904.4	5823.4	4969.7	4127.6	3891.5	3858.7	5082.8	4530.9	5198.4	True	False	4091.569512368086	4549.535736547378	4601.1479214696255	4534.014116957015	4670.451748280198	4643.477299468578	4724.111700739742	4904.035043041534	4320.2594479527825	4256.91938647408	0.9611573865759883	1.0687389925689117	1.0808632966105245	1.065092783143457	1.0971435736180664	1.0908069610673732	1.1097489221313699	1.1520150131627103	1.0148793189929692	1.0	12.055594054641876	-6.240741610180366	2.999204003776502	1.0836928166120225	0.9376572441198396	0.39145603960720865	0.04204557236239976	0.3907534595505245	4.971172663255476	0.01024425245530961	0.1400226993429485	5.744581427819512e-07	6.240741610180366	-0.1460355724921829	
ESVFTVEGGHR	ddPTM_K562_Methotrexat_30min_R1	2	ESVFTVEGGHR	11	0	J3KPX7;Q99623-2;Q99623;F5H2D2;F5H0C5;F5H3X6;F5GWA7;F5GY37	J3KPX7	PHB2	Prohibitin-2	0	;	100.69	0.008248	5666300.0	6239.9	4470.2	6982.9	7360.900000000001	5499.2	5657.5	5380.5	7093.1	6416.200000000001	7264.5	False	True	5965.6014674452945	5208.824569591767	5517.284716974658	6715.5813255345165	6222.4411895877665	6750.731805664516	6587.214089157021	6843.631652592645	6117.9122624544025	5948.8286555557415	1.002819515044174	0.8756050764257819	0.9274573258757327	1.1288913691038467	1.0459943544980896	1.1348001760581656	1.107312795604741	1.150416670044989	1.0284230084086805	1.0	12.538389909522536	-7.253983225272339	24.79751565430897	1.0927516306120983	0.9293250659036804	0.6098435684677586	0.0546163778348757	298.05618451874545	991266.6183551489	0.014097094316321935	0.023780909340220927	5.5720727077964984e-08	7.253983225272339	-0.163426564708418	
ESVNS(ph)PVFGK	ddPTM_K562_Methotrexat_30min_R1	2	ESVNSPVFGK	10	0	E7ESJ3;Q9UPS8;Q9UPS8-2	E7ESJ3	ANKRD26	Ankyrin repeat domain-containing protein 26	1	ES(0.07)VNS(0.93)PVFGK;ESVNS(1)PVFGK	139.78	8.221799999999999e-05	37645000.0	5781.9	3757.9	8696.4	6242.9	4759.9	3721.4	3884.7	4929.0	5362.6	7252.3	True	False	5527.73459905158	4378.8291016216035	6871.1444833376445	5695.594649727541	5385.910281189776	4440.507881855932	4755.9428625867995	4755.644276216201	5113.293896486702	5938.838193776154	0.9307771012930766	0.7373208292171648	1.1569846254674085	0.9590418974028405	0.9068962826490471	0.7477064935881806	0.8008204142640192	0.8007701373645895	0.860992290014802	1.0	12.535965010971536	-8.040989073848143	7.722975730837967	0.8268195237086285	0.9446919947191543	0.15399921769979663	0.11280396852632202	0.46802475325102466	78.77473664509961	0.03721883810086639	0.03775826062366776	9.099361648771891e-09	8.040989073848143	0.11787247101052578	
ESVPEFPLS(ph)PPK	ddPTM_K562_Methotrexat_30min_R1	2	ESVPEFPLSPPK	12	0	A2A2D0;P16949;P16949-2	A2A2D0	STMN1	Stathmin	1	ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK	217.68	1.1429000000000002e-24	48157000.0	9973.5	7543.5	16196.2	10362.2	8977.3	7641.700000000001	5866.5	10105.8	10326.599999999999	11888.8	True	False	9535.07688193171	8789.935157423713	12796.83895416876	9453.762014353377	10157.972303478004	9118.350373724536	7182.211960605831	9750.373285978036	9846.518619971572	9735.623115172566	0.9794007809394026	0.9028631299135813	1.3144345054016537	0.9710484786145922	1.043381834250262	0.9365964834355557	0.7377249381616521	1.0015150720843418	1.0113906941021762	1.0	13.249057604275375	-8.27430354161386	5.566856507251862	0.924391629376133	1.0460627523002677	0.14518053704746248	0.1251944407970361	0.32544880952933725	36.82301894245411	0.04486663648609036	0.04128465240978983	5.317364825690203e-09	8.27430354161386	0.12167112292413473	
ESYDDVSSFR	ddPTM_K562_Methotrexat_30min_R1	2	ESYDDVSSFR	10	0	H7C2Q8;Q99848	H7C2Q8	EBNA1BP2	Probable rRNA-processing protein EBP2	0	;	192.91	1.0873e-07	28769000.0	3271.5	2851.2	4237.5	3793.8	2804.8999999999996	2686.1000000000004	2495.61	2788.5	3712.7	3651.2000000000003	False	True	3127.6887771834927	3322.3123378864566	3348.1066588638146	3461.2034442544873	3173.7935140883624	3205.1508092258873	3055.3140698896304	2690.426874463154	3540.097387365492	2989.9322991486156	1.0460734438950685	1.111166409631578	1.1197934681722357	1.1576193364779752	1.0614934374909095	1.0719810646343249	1.021867308085749	0.8998286935223431	1.1840058680838814	1.0	11.545897102601074	-8.39042305392107	1.9439908114182014	1.0200952574383262	1.1070806876884494	0.1883287675130617	0.0707121454037156	0.5109426580053461	3.8148405852950193	0.02936755448373262	0.02460081773580783	4.069836347042372e-09	8.39042305392107	0.08698543025012317	
ESYTEEIVS(ph)EAESHVSGISR	ddPTM_K562_Methotrexat_30min_R1	6	ESYTEEIVSEAESHVSGISR	20	0	Q5QJE6;J3KP30;E9PRB3	Q5QJE6	DNTTIP2	Deoxynucleotidyltransferase terminal-interacting protein 2	1	ESYTEEIVS(0.998)EAES(0.002)HVSGISR;ESYTEEIVS(1)EAESHVSGISR;ESYTEEIVS(0.997)EAES(0.002)HVSGISR;ESYTEEIVS(1)EAESHVSGISR;ESYTEEIVS(1)EAESHVSGISR;ESYTEEIVS(0.946)EAES(0.051)HVS(0.002)GIS(0.001)R	280.31	1.4422999999999997e-155	148312900.0	8151.5	6735.41	6771.75	7753.15	6672.139999999999	6861.67	6217.649999999999	7597.1	8501.699999999999	8971.289999999999	True	False	7793.169820330504	7848.322020105157	5350.452216439177	7073.4433770419355	7549.643358796939	8187.5906158151265	7612.116286859421	7329.905686922728	8106.457822653374	7346.502447422486	1.0608000032811167	1.0683072763228623	0.7282992491639854	0.9628314191229389	1.027651377349738	1.1144882444962276	1.0361551420336252	0.9977408623193775	1.1034445139942093	1.0	12.842841853970965	-7.787197013676523	4.398198999105064	1.050793018069663	0.9460386648062965	0.18637169477355975	0.09393775416681709	0.34422537160903116	15.28416315928725	0.030773201042303303	0.03686287222821394	1.6323112969836842e-08	7.787197013676523	-0.10475435326336646	
ET(ph)ERT(ph)MSATSGPLGLR	ddPTM_K562_Methotrexat_30min_R1	1	ETERTMSATSGPLGLR	16	1	H7C4I4;H7C4U0;H7C4J5;H7C4U5;Q8NCC5-3	H7C4I4	SLC37A3		2	ET(0.994)ERT(0.983)MS(0.024)ATSGPLGLR	79.20100000000001	0.032441000000000005	38847000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
ET(ph)IKFMY(ph)TDWADRHNPETR	ddPTM_K562_Methotrexat_30min_R1	1	ETIKFMYTDWADRHNPETR	19	2	J3KQ19;Q8N2Q7-2;Q8N2Q7	J3KQ19	NLGN1	Neuroligin-1	2	ET(0.996)IKFMY(0.543)T(0.461)DWADRHNPET(0.001)R	43.349	0.0327	0.0	725.41	613.27	869.14	772.03	849.44	721.89	756.11	795.67	908.56	795.81	True	False	693.5218449814087	714.6024436923497	686.7193915008604	704.3473285539017	961.1562489241044	861.3850257518617	925.6869147760452	767.6858351099506	866.3212439100361	651.6810974434321	1.0642043289303913	1.0965523574272142	1.0537660125403128	1.0808159563275366	1.4748874145571418	1.3217891835916455	1.4204599740694452	1.1780084432732654	1.3293637751787566	1.0	9.348022338756778	-7.678035731688805	10.84387720273501	1.3045972723096775	1.0733326419458558	0.41291887308801345	0.12376369526408403	0.38462756191799696	47.49130250394973	0.03477497143139419	0.04489004614857772	2.0987671999153848e-08	7.678035731688805	-0.23126463036382172	
ET(ph)KKT(ph)T(ph)T(ph)DLK	ddPTM_K562_Methotrexat_30min_R1	1	ETKKTTTDLK	10	2	A0A087WTW5;Q9UKL3	A0A087WTW5	CASP8AP2	CASP8-associated protein 2	4	ET(1)KKT(1)T(1)T(1)DLK	45.598	0.032273	20249000.0	2058.7	2192.4	2249.2	1809.8	2095.9	2197.5	2355.6	1913.0	2503.4	2159.0	True	False	1968.202013017776	2554.656835571785	1777.1236571366353	1651.1376438957705	2371.547586786623	2622.1357742726964	2883.903263343236	1845.7187057012773	2387.0174804133853	1767.984178862253	1.113246394707202	1.4449545794101946	1.005169434423482	0.9339097394855216	1.3413850729777343	1.4831217414853304	1.6311816009570335	1.043967886007356	1.3501350911123524	1.0	10.78788964922226	-7.8673529306594014	24.89746764352947	1.3353914643611626	1.138522831162001	0.1415181108333753	0.21474976582717317	17.757059825563104	4120.017619312858	0.06849927066022296	0.07767090475014614	1.3572100576561817e-08	7.8673529306594014	-0.1968686331991616	
ET(ph)QARLEESFETLK	ddPTM_K562_Methotrexat_30min_R1	1	ETQARLEESFETLK	14	1	Q6N039;E9PC87;O94876-2;O94876	Q6N039	DKFZp686H13261;TMCC1	Transmembrane and coiled-coil domains protein 1	1	ET(1)QARLEESFETLK	73.848	0.027525	0.0	1288.1	1137.1	1533.6	1563.3	1363.7	1241.7	1343.8	1237.3	1209.4	1403.0	True	False	1231.4766663273908	1324.9864476047599	1211.7183178840219	1426.2479161798299	1543.0504528369288	1481.640951496887	1645.1813573105114	1193.7834576916835	1153.1752579739339	1148.903104652034	1.0718716498728287	1.1532621351963843	1.0546740738863376	1.2413996536390202	1.343064046557929	1.2896134978637983	1.4319583180243771	1.0390636537214706	1.0037184626837559	1.0	10.166041414819654	-9.490603534158696	24.26519461712482	1.0083697498020898	1.2253773771893717	0.44533571406708916	0.10904345518976417	438.72846989893713	329847.2626096677	0.06622856199706383	0.03176407663461449	3.2314427478575883e-10	9.490603534158696	0.21700762738728185	
ET(ph)S(ph)LAT(ph)PAGKESQEGPK	ddPTM_K562_Methotrexat_30min_R1	1	ETSLATPAGKESQEGPK	17	1	Q9UKJ3-2;Q9UKJ3	Q9UKJ3-2	GPATCH8	G patch domain-containing protein 8	3	ET(1)S(1)LAT(1)PAGKESQEGPK	54.393	0.032128	0.0	71.46600000000001	101.12	147.09	238.2	0.0	109.77	166.86	145.29	61.56399999999999	153.85	True	False	68.32444021097223	117.82836125388565	116.21781910378252	217.31737582935813	0.0	130.98149894967636	204.28260253075743	140.18006834884403	58.701903077482456	125.98627416301885	0.5423165393601879	0.9352476056353779	0.9224641325086214	1.724928983518968	0.0	1.0396489603319325	1.6214671311449986	1.1126614330022908	0.46593887681387924	1.0	6.977122754645937	-8.502417809603203	24.982321707684203	1.0981415176303897	0.849858120469082	0.0468508806431992	0.47734108599630654	2604.410797172198	3179932.4932960467	0.17188980660183187	0.14977779053309664	3.1447215036944115e-09	8.502417809603203	-0.24828339716130765	
ET(ph)VNSPAIYK	ddPTM_K562_Methotrexat_30min_R1	2	ETVNSPAIYK	10	0	Q9Y3A2	Q9Y3A2	UTP11L	Probable U3 small nucleolar RNA-associated protein 11	1	ET(0.926)VNS(0.074)PAIYK;ET(0.947)VNS(0.053)PAIYK	155.86	3.8935e-08	62179000.0	7538.1	5418.1	10008.7	7104.3	4748.9	5152.8	4545.700000000001	7368.3	6704.6	8387.0	True	False	7206.734149866084	6313.348933046654	7908.010646978226	6481.47704913732	5373.463588382558	6148.505673571037	5565.188938775405	7109.152712607807	6392.904609403039	6868.033028308348	1.049315593003367	0.9192368334608436	1.151422920417439	0.9437166394544495	0.7823875578691102	0.8952353094733826	0.8103031706220779	1.0351075312692328	0.9308203066370028	1.0	12.745681261926142	-7.510272270050607	24.924576328695498	0.9012869012745092	1.0311918803624274	0.30162730352014944	0.08848394105875823	717.2716222003272	1418136.304567762	0.0254260874332903	0.035673234592330065	3.088358656343897e-08	7.510272270050607	0.1299049790879182	
ETAVPGPLGIEDIS(ph)PNLSPDDKSFSR	ddPTM_K562_Methotrexat_30min_R1	2	ETAVPGPLGIEDISPNLSPDDKSFSR	26	1	A6NNK5;Q12888;Q12888-3;Q12888-2	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	ETAVPGPLGIEDIS(1)PNLSPDDKSFSR;ETAVPGPLGIEDIS(1)PNLSPDDKSFSR	91.73299999999999	6.184e-05	14594000.0	5029.6	3793.5	6255.5	4868.7	3240.3	3024.24	2864.1	4327.8	4235.7	5632.5	True	False	4808.504806272993	4420.31139652507	4942.556036465504	4441.868630144398	3666.4562457486977	3608.6315786058963	3506.4473325443046	4175.588820979609	4038.783231519919	4612.399669959074	1.042516943531838	0.9583539399924317	1.0715801730402428	0.9630276966401331	0.7949129537989994	0.7823761679000197	0.7602219199220906	0.9052964009549197	0.8756360073965045	1.0	12.171301814322545	-7.606524870357644	4.855943342398848	0.8408513588964446	1.017753436331724	0.5445362049227043	0.07071689826684302	0.15024251583148943	6.26464665476519	0.021148969193413428	0.02768225004722531	2.4744297562979868e-08	7.606524870357644	0.17690207743527941	
ETAVPGPLGIEDISPNLS(ph)PDDKSFSR	ddPTM_K562_Methotrexat_30min_R1	2	ETAVPGPLGIEDISPNLSPDDKSFSR	26	1	A6NNK5;Q12888;Q12888-3;Q12888-2	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	ETAVPGPLGIEDIS(0.055)PNLS(0.942)PDDKS(0.003)FSR;ETAVPGPLGIEDIS(0.019)PNLS(0.973)PDDKS(0.007)FS(0.001)R	121.3	2.7601e-10	111681000.0	6129.6	4619.3	9331.8	7871.8	4830.5	4137.5	3663.3	5986.9	6773.700000000001	8532.1	True	False	5860.1501233758045	5382.560810325095	7373.18270659241	7181.691515757938	5465.795418661572	4937.013317885454	4484.888276704563	5776.337333592777	6458.792165485397	6986.854012260605	0.838739454566011	0.7703840384928211	1.0552936548629572	1.0278862994926516	0.7822970694779277	0.7066146378930963	0.6419038194922113	0.8267436708218606	0.9244206554411243	1.0	12.770427280665812	-7.795133831381184	24.897999903787184	0.7910599970393681	0.9216134840171657	0.14517486830401394	0.12291153713293568	303.79270114531556	224481.20860476975	0.0403765900380686	0.045785260099993126	1.6027514136826367e-08	7.795133831381184	0.13055348697779756	
ETCSTLAES(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	ETCSTLAESPR	11	0	Q6P2E9-2;Q6P2E9	Q6P2E9-2	EDC4	Enhancer of mRNA-decapping protein 4	1	ETCSTLAES(1)PR	172.13	0.00070019	30309000.0	1525.6	1450.1	2084.8	1624.2	1571.9	1385.4	1444.1	1665.5	1505.0	1809.4	True	False	1458.5364507018605	1689.7043775144325	1647.2289704777063	1481.8089077331806	1778.6324021517694	1653.1089427428403	1767.9761855128058	1606.923420985613	1435.032878494106	1481.7001265555175	0.984366826027406	1.1403821510378478	1.11171548207058	1.0000734164597231	1.2003997099511121	1.115683877672194	1.1932078251371885	1.0845132508162767	0.9685042558713293	1.0	10.533037782436244	-12.846117485579072	7.438972334452511	0.9931659933196457	1.0953681205374344	0.09904510393591648	0.07805453740348496	0.009272996783193639	0.00019182080356310372	0.07921645634038056	0.018171479620746594	1.4252219896210956e-13	12.846117485579072	0.10220212721778865	
ETCSTLAES(ph)PRNGLQEK	ddPTM_K562_Methotrexat_30min_R1	1	ETCSTLAESPRNGLQEK	17	1	Q6P2E9-2;Q6P2E9	Q6P2E9-2	EDC4	Enhancer of mRNA-decapping protein 4	1	ETCSTLAES(1)PRNGLQEK	126.16	0.00025432	14361000.0	2059.2	1641.5	2517.1	2077.8	1504.4	1267.9	1497.3	1791.1	1955.8	2799.7	True	False	1968.6800336164604	1912.7299742707014	1988.7951082067495	1895.642499992613	1702.254969016555	1512.9037306941314	1833.1076397537033	1728.105997794856	1864.87528488955	2292.647200352317	0.8586929699929096	0.8342888404185201	0.8674667030763068	0.8268356769856716	0.7424844820236471	0.6598938251213006	0.7995594086486594	0.7537601064521804	0.8134157251071903	1.0	11.16279865028205	-7.577768299330575	5.979482064903283	0.7762698400592141	0.8509822988349802	0.06750394412747385	0.08233762397531227	0.3692524053010365	27.95000926571168	0.0234168398494911	0.030561592129564902	2.6438188862848285e-08	7.577768299330575	0.07471245877576616	
ETEAAPTS(ph)PPIVPLK	ddPTM_K562_Methotrexat_30min_R1	2	ETEAAPTSPPIVPLK	15	0	A0A3B3IT55;A0A0G2JNT7;Q7Z3B3-4;Q7Z3B3-2;Q7Z3B3;A0A1W2PRB5;A0A0J9YVS1;A0A0G2JNB1	A0A3B3IT55	KANSL1	KAT8 regulatory NSL complex subunit 1	1	ETEAAPT(0.067)S(0.933)PPIVPLK;ETEAAPT(0.155)S(0.844)PPIVPLK	155.39	1.2658e-08	47281000.0	8573.7	6590.1	11426.9	8759.9	6006.6	6212.4	5121.9	7166.8	7162.2	8798.1	True	False	8196.810413858508	7679.002012452847	9028.549847827939	7991.93316762214	6796.573183258999	7412.8583772886	6270.616456324379	6914.739581819089	6829.230885282714	7204.678834667897	1.1377065656857062	1.0658354367584817	1.253150911374957	1.109269871845791	0.9433554693034822	1.0288950482593302	0.8703533634491879	0.9597568108860507	0.9478883156347538	1.0	12.814718405005332	-7.693822396806258	4.5801360204941926	0.9551378819263038	1.1487259994731351	0.7105378935075741	0.05757298453232008	0.11169097061778628	4.524608256978805	0.017253815376582483	0.022148503966586568	2.0238466544079135e-08	7.693822396806258	0.19358811754683136	
ETFGFS(ph)RPR	ddPTM_K562_Methotrexat_30min_R1	1	ETFGFSRPR	9	1	Q6AHZ1-2;Q6AHZ1	Q6AHZ1-2	ZNF518A	Zinc finger protein 518A	1	ET(0.087)FGFS(0.913)RPR	101.46	0.018084	17103000.0	0.0	132.66	68.03	0.0	100.64	49.784	59.013999999999996	0.0	186.24	0.0	True	False	0.0	154.57981016555047	53.751432684956974	0.0	113.87592401078578	59.40405341815331	72.24939174008223	0.0	177.58174305032705	0.0											0.0														
ETLVYLTHLDYVDTER	ddPTM_K562_Methotrexat_30min_R1	1	ETLVYLTHLDYVDTER	16	0	O14980	O14980	XPO1	Exportin-1	0		90.49799999999999	0.012976	10294000.0	1593.7	1300.2	2123.4	1985.5	1519.6	1306.2	1375.6	1687.7	1846.5	1931.2	False	True	1523.6428562424978	1515.035950378779	1677.727357977916	1811.4342976876185	1719.4540354410767	1558.604663642775	1684.1133168003719	1628.3426344025345	1760.656618032801	1581.4409662893856	0.963452249385886	0.9580098041431062	1.0608852266641682	1.145432764359126	1.087270452766579	0.9855598134022083	1.0649232900244714	1.029657552265891	1.1133242754953527	1.0	10.627023987067414	-6.765074738166594	12.154126621234228	1.0633683302403472	0.9606963980559777	0.432052895181003	0.04585951762566721	0.1540310453136363	485.74729069364116	0.012245313491987958	0.027829424439323496	1.7176127760422073e-07	6.765074738166594	-0.10267193218436943	
ETLWNQS(ph)VI	ddPTM_K562_Methotrexat_30min_R1	2	ETLWNQSVI	9	0	J3KRP5	J3KRP5	LRRC47		1	ETLWNQS(1)VI;ETLWNQS(1)VI	94.40700000000001	0.010835	19040100.0	171.95	354.48	528.45	338.40999999999997	357.15	250.24399999999997	435.52	267.18	302.995	539.3	True	False	164.39128388711651	413.051794870227	417.53556669653864	308.7421207154202	404.12148509988225	298.6001113524897	533.1964464472942	257.7831279609344	288.9088285842668	441.62754407615233	0.37223965328297004	0.9352944588958929	0.9454472944390004	0.6991006898387253	0.9150730984075516	0.6761356155380571	1.2073441831231253	0.5837116172185207	0.6541911446865022	1.0	8.786686344822952	-6.254091417991114	24.465867742361677	0.8398658393802826	0.372239351768775	0.3771847842191679	0.18256669860480912	707.4529895894175	2355466.81491995	0.044133458590114874	0.4377232572599907	5.570684749547025e-07	6.254091417991114	-0.4676264876115076	
ETPHS(ph)PGVEDAPIAK	ddPTM_K562_Methotrexat_30min_R1	4	ETPHSPGVEDAPIAK	15	0	Q9UHB6;F8VS07;F8VQE1;Q9UHB6-3;Q9UHB6-2;Q9UHB6-4;Q9UHB6-5	Q9UHB6	LIMA1	LIM domain and actin-binding protein 1	1	ET(0.002)PHS(0.998)PGVEDAPIAK;ETPHS(1)PGVEDAPIAK;ET(0.114)PHS(0.886)PGVEDAPIAK;ET(0.02)PHS(0.98)PGVEDAPIAK	166.9	2.6287e-09	486068000.0	26392.3	19274.0	36351.700000000004	28599.7	19537.2	18320.5	16853.6	23643.299999999996	23635.699999999997	30334.3	True	False	25232.126093247716	22458.700898016123	28721.974945373368	26092.408704898797	22106.684246656627	21860.67733905026	20633.448819443678	22811.751737849998	22536.881465928975	24840.46432462309	1.0157670872615852	0.9041175963749579	1.1562575711156386	1.0503993952735704	0.8899464984937255	0.8800430238890857	0.8306386124590589	0.9183303274745096	0.9072649034015563	1.0	14.600404520602622	-7.7649071595840296	24.99901133592232	0.8953840856420902	1.0314285905083729	0.44198056044812517	0.06961652785958124	81.59481080627565	588212.1060668165	0.021706469125568947	0.025604411657459324	1.7182756687708502e-08	7.7649071595840296	0.13604450486628272	
ETPPNGNLS(ph)PAPR	ddPTM_K562_Methotrexat_30min_R1	2	ETPPNGNLSPAPR	13	0	P48634-2;P48634-3;P48634	P48634-2	PRRC2A	Protein PRRC2A	1	ETPPNGNLS(1)PAPR;ETPPNGNLS(1)PAPR	105.19	0.0031999000000000003	56651000.0	1519.99	1431.3000000000002	2043.85	1314.6599999999999	1636.9	1512.21	1161.5	2015.0	1815.96	2100.45	True	False	1453.1730595846368	1667.7979970597946	1614.8738158628455	1199.405798941327	1852.1810414671631	1804.423180529198	1421.9959417444252	1944.1313078871272	1731.5364159668795	1720.0381512233528	0.8448493183427868	0.9696284910155027	0.9388593007162599	0.6973134858016182	1.0768255577062786	1.0490599753533534	0.8267234890883384	1.1302838291722723	1.00668488936443	1.0	10.748224849572203	-7.8033682365799235	24.99999983837288	1.0137400334121436	0.8757444924432276	0.3555227154945304	0.09980657578926987	179.7683830941007	107185.498094469	0.031180950377150848	0.03535617266589062	1.572648856227604e-08	7.8033682365799235	-0.13799554096891598	
ETPSSSPAS(ph)PQETR	ddPTM_K562_Methotrexat_30min_R1	1	ETPSSSPASPQETR	14	0	Q9BX66-4;Q9BX66-9;Q9BX66-8;Q9BX66-10;Q9BX66-6;Q9BX66-5;Q9BX66-12;Q9BX66-7;Q9BX66-3;Q9BX66-2;Q9BX66-11;Q9BX66;S4R406	Q9BX66-4	SORBS1	Sorbin and SH3 domain-containing protein 1	1	ET(0.001)PS(0.004)S(0.065)S(0.24)PAS(0.68)PQET(0.01)R	86.214	0.023111000000000003	4942700.0	531.91	630.79	1016.8	818.24	644.21	665.04	619.09	581.5	629.84	1012.6	True	False	508.52787329105064	735.0173259032687	803.3875753941537	746.5061695995549	728.9349066672128	793.5495678372307	757.9366918420629	561.0483154026623	600.5588758742372	829.2083277053813	0.6132691343058136	0.8864085192405607	0.9688609587621004	0.9002637149886289	0.8790733068062049	0.9569966211424493	0.914048576838894	0.6766071886364405	0.7242557217631037	1.0	9.695590795222204	-11.96246478330087	7.296814616470948	1.0000000041559098	0.8453414739372902	0.1478933651158083	0.11630820331183313	8.295997117898881e-09	1.2143333597540481e-09	0.11892717780907713	0.028844076544111287	1.0902728984264836e-12	11.96246478330087	-0.15465853021861964	
ETQS(ph)PEQVK	ddPTM_K562_Methotrexat_30min_R1	3	ETQSPEQVK	9	0	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	ETQS(1)PEQVK;ET(0.065)QS(0.935)PEQVK;ETQS(1)PEQVK	142.19	3.2488000000000005e-05	96210000.0	11729.8	8035.7	16262.699999999999	11279.9	9614.1	8189.299999999999	7111.700000000001	11367.4	10993.3	13416.599999999999	True	False	11214.17203686595	9363.462841454202	12849.381512945023	10291.00868017454	10878.522665263275	9771.766323663891	8706.679757988655	10967.602098896348	10482.223882491191	10986.723730487876	1.0207021048273845	0.8522525068570563	1.169537145754227	0.9366767502870083	0.9901516532244872	0.8894158589377733	0.7924728036828524	0.9982595692710042	0.9540809562183937	1.0	13.423473614566483	-8.243055361983439	21.271556075067856	0.9183387676423207	0.9925793320030897	0.1121765342416049	0.09270369014092164	257.8207833579927	298314.05849048425	0.030499462126937132	0.0303990494693777	5.714057916883982e-09	8.243055361983439	0.07424056436076898	
ETQS(ph)PEQVKSEK	ddPTM_K562_Methotrexat_30min_R1	6	ETQSPEQVKSEK	12	1	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	ET(0.001)QS(0.998)PEQVKSEK;ET(0.001)QS(0.995)PEQVKS(0.003)EK;ETQS(1)PEQVKSEK;ETQS(0.999)PEQVKS(0.001)EK;ETQS(0.997)PEQVKS(0.003)EK;ET(0.006)QS(0.994)PEQVKSEK	205.28	5.7056000000000006e-11	287862000.0	15456.1	10299.699999999999	26605.499999999996	17184.2	9590.199999999999	8548.970000000001	8709.1	13054.5	12390.1	21500.699999999997	True	False	14776.66835061158	12001.550360034078	21021.369135669895	15677.687866191669	10851.479396345767	10200.937460834612	10662.337370853522	12595.36583563896	11814.086955368648	17606.714883957222	0.8392632270132172	0.6816462036861616	1.1939404525045167	0.8904379930907366	0.6163261839511782	0.5793776708526949	0.605583576557417	0.7153728517019111	0.6709989361009836	1.0	14.103838131265752	-7.738359613089254	12.286021635564945	0.67317074130805	0.906621530963439	0.26621898066606775	0.16222335784752975	1.029669857504814	544.0343936051997	0.047762258964258474	0.061094737541069324	1.826587103063038e-08	7.738359613089254	0.233450789655389	
ETSFGS(ph)SENITMTSLSK	ddPTM_K562_Methotrexat_30min_R1	1	ETSFGSSENITMTSLSK	17	0	Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;A0A087WZS7	Q9UMZ2-6	SYNRG	Synergin gamma	1	ETS(0.001)FGS(0.945)S(0.054)ENITMTSLSK	132.4	2.1461e-05	53046000.0	1603.2	1065.0	2266.8	1529.5	1169.2	878.51	1092.3	1623.9	1482.9	2347.5	True	False	1532.7252476174774	1240.9731480952157	1791.029657654865	1395.4111097019454	1322.9702936547162	1048.269624143939	1337.2760802130304	1566.786516564718	1413.960302670372	1922.345002259909	0.7973205880399228	0.6455517332405617	0.9316900221080662	0.7258900499449891	0.6882064832792408	0.5453077480429335	0.6956483246456429	0.8150391915721703	0.7355393027828615	1.0	10.908651563740893	-10.616691403177128	1.1374149309018964	1.0000828527235834	0.7229800589566211	0.4043046725796309	0.09814742906058775	3.1774504061342332	4.908721357549761	0.10081694118459465	0.030487189432705335	2.417177799462807e-11	10.616691403177128	-0.27710279376696234	
ETSQVILRPS(ph)SSPNPTTIQNENLK	ddPTM_K562_Methotrexat_30min_R1	1	ETSQVILRPSSSPNPTTIQNENLK	24	1	Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5	Q9ULH0-2	KIDINS220	Kinase D-interacting substrate of 220 kDa	1	ETSQVILRPS(0.333)S(0.333)S(0.333)PNPTTIQNENLK	124.4	6.357100000000001e-10	31048000.0	1013.7	642.24	1236.3	766.04	469.5	765.26	628.69	877.56	787.92	910.58	True	False	969.1389617701083	748.3592437865452	976.8175250391341	698.8824625538266	531.2474793627176	913.1356644459271	769.6897362163609	846.6957173942573	751.2897711781231	745.6651382993941	1.2996972930508472	1.0036130232577258	1.3099948956537235	0.9372604761270418	0.7124477893311608	1.2245921359934777	1.0322190172008827	1.1354905491830811	1.0075431082798867	1.0	9.54238408329262	-3.0000104805730334	0.869456539551742	1.0301853331832411	103.33135448456878	0.20104146684734425	0.15443275324676906	1378.9629614221415	3.482188722013912	0.0535879523446213	279406.85640591226	0.0009999758678799515	3.0000104805730334	102.30116915138554	
ETSQVILRPSS(ph)SPNPTTIQNENLK	ddPTM_K562_Methotrexat_30min_R1	1	ETSQVILRPSSSPNPTTIQNENLK	24	1	Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5	Q9ULH0-2	KIDINS220	Kinase D-interacting substrate of 220 kDa	1	ETSQVILRPS(0.139)S(0.722)S(0.139)PNPTTIQNENLK	104.41	2.8074e-07	19895000.0	1007.1	721.49	1311.4	919.12	702.24	688.22	671.13	672.84	853.67	1047.1	True	False	962.8290898674907	840.7039592668701	1036.1550613413585	838.542176625859	794.5968688129389	821.2087747758617	821.6479865544005	649.1758358306573	813.9830680292771	857.4600433935461	1.122885080518654	0.9804584665422299	1.2084004022398478	0.9779373197463331	0.9266867592665713	0.9577224980954053	0.9582347222881509	0.7570916462316214	0.9492956252606227	1.0	9.743925634773225	-7.483758486352318	6.194607955176319	0.918746039422871	1.0928076040090626	0.4991069952966035	0.07984610891321256	0.16918073826376154	18.26545526907675	0.02268847861568643	0.032999593903145996	3.282777995256611e-08	7.483758486352318	0.1740615645861916	
ETVFTKS(ph)PYQEFTDHLVK	ddPTM_K562_Methotrexat_30min_R1	1	ETVFTKSPYQEFTDHLVK	18	1	H0YEN5;P15880;E9PQD7	H0YEN5	RPS2	40S ribosomal protein S2	1	ET(0.085)VFT(0.125)KS(0.772)PY(0.018)QEFTDHLVK	74.296	0.015657	14087000.0	2618.0	1523.5	3830.1	2352.5	1790.1	1470.2	1280.2	2124.3	2500.0	3750.0	True	False	2502.915854704688	1775.232479927756	3026.214351413403	2146.2599774918776	2025.5295267459026	1754.2953425873568	1567.3174383307912	2049.587164935298	2383.77554567127	3070.8386617570395	0.8150593796655525	0.5780936986484411	0.9854683637732685	0.6989165546925391	0.6596014150697702	0.5712756467588573	0.5103874253797561	0.6674356391496605	0.7762620600547431	1.0	11.58441700147036	-10.108653523899397	3.2876144954028867	0.9997730331356104	0.682773109890283	0.35591204098424734	0.12783852668161894	0.5240903923599456	11.959748762468053	0.12893825299985898	0.0342148355402218	7.786575090321721e-11	10.108653523899397	-0.31699992324532744	
ETVQISS(ph)PSAR	ddPTM_K562_Methotrexat_30min_R1	2	ETVQISSPSAR	11	0	A6NK88;A0A2R8YFP9	A6NK88	CDKN1C		1	ETVQIS(0.125)S(0.864)PS(0.011)AR;ETVQIS(0.268)S(0.73)PS(0.002)AR	113.07	0.00016477	8623900.0	3257.3999999999996	3381.1	4506.7	3850.9	3130.9	3021.1	3170.3	3590.6	3670.5	4191.4	True	False	3114.2085963006302	3939.7693061265077	3560.805257699482	3513.297575907955	3542.668228193254	3604.884818045619	3881.320477066165	3464.316562828547	3499.859256154562	3432.2968445035904	0.9073249597533092	1.1478521481717332	1.037440937954327	1.023599570513278	1.032156712746571	1.0502835218982902	1.1308230764718477	1.009328947866567	1.0196843148223513	1.0	11.744958615347361	-6.232484128466499	24.442480740364704	1.0511606365505566	0.9073246588114756	0.45063801796776903	0.04728971944760466	7696.3055413093	6496680.481857508	0.011630063677793762	1.1679846721733202	5.854851328095686e-07	6.232484128466499	-0.14383597773908097	
EVDEDS(ph)EPEREVR	ddPTM_K562_Methotrexat_30min_R1	1	EVDEDSEPEREVR	13	1	F8WC91;B9A018;Q53GS9-3;Q53GS9	F8WC91	USP39	U4/U6.U5 tri-snRNP-associated protein 2	1	EVDEDS(1)EPEREVR	183.81	0.00039895	37518000.0	3567.8	3384.4	4377.0	3967.0	3409.6	2928.2	3339.4	3484.8	3394.4	4135.0	True	False	3410.963783963096	3943.614575036101	3458.327515244109	3619.219269164836	3858.022163227099	3494.0332078385914	4088.345456617592	3362.237608796558	3236.595084890625	3386.111431030765	1.007339496481002	1.164644063067832	1.021327143445885	1.0688423410989494	1.1393665689414954	1.0318718916981933	1.2073865671257784	0.9929494871269079	0.9558442333675281	1.0	11.725413735258392	-9.490951342810256	24.492221492552318	0.976746978212318	1.0910258116716047	0.3952360601440317	0.06174668027014234	446.2942535537985	342364.18289136136	0.0314331058338368	0.015074203834177652	3.228855853804301e-10	9.490951342810256	0.11427883345928669	
EVDFDS(ph)DPMEECLR	ddPTM_K562_Methotrexat_30min_R1	1	EVDFDSDPMEECLR	14	0	Q8N1G1	Q8N1G1	REXO1	RNA exonuclease 1 homolog	1	EVDFDS(1)DPMEECLR	110.51	0.0015097	5723800.0	1016.6	1046.1	1346.7	1081.3	1043.6	982.17	827.02	1448.1	1202.7	1473.0	True	False	971.9114812424698	1218.9502443402862	1064.0460737444005	986.504107826553	1180.8516921468206	1171.9604520670823	1012.5002873366112	1397.1695022091067	1146.7867395115356	1206.225426338165	0.8057461400005297	1.0105492868283756	0.8821287053901775	0.817843900722075	0.9789643514078677	0.9715932250117595	0.8393955766712191	1.1582988317951528	0.9507234008430147	1.0	10.236283836235604	-9.247834545892445	24.980201372043314	1.040883349217574	0.9069131944330702	0.36304959931597414	0.08187979163949033	794.7913498874439	1459341.4250886743	0.0372342631283796	0.02134943649007768	5.651522410754049e-10	9.247834545892445	-0.1339701547845038	
EVDGLLTSEPMGS(ph)PVSSK	ddPTM_K562_Methotrexat_30min_R1	3	EVDGLLTSEPMGSPVSSK	18	0	Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6	Q8WWM7-6	ATXN2L	Ataxin-2-like protein	1	EVDGLLT(0.028)S(0.238)EPMGS(0.727)PVS(0.006)S(0.001)K;EVDGLLTSEPMGS(0.996)PVS(0.003)S(0.001)K;EVDGLLTS(0.005)EPMGS(0.994)PVS(0.001)SK	155.79	1.2222e-14	179448000.0	12417.5	8434.1	16686.7	10827.999999999998	9498.4	8466.4	7788.299999999999	11306.9	12142.2	13986.0	True	False	11871.641568294679	9827.691669812077	13184.389707247858	9878.726051554533	10747.606087281873	10102.411976929401	9535.024531285499	10909.229918188072	11577.711772259889	11452.999872889066	1.036553016681385	0.8580888657019605	1.151173478876678	0.8625448494886419	0.9384096923569375	0.8820756211517382	0.8325351119453256	0.9525216134867706	1.0108890160442623	1.0	13.483437911049778	-6.210461815215268	21.447195578488397	0.9401242376979252	1.0365559504034305	0.08756606806307077	0.08999144754362964	18085.000002816865	7607423.896243148	0.022137815997024253	13.526892314664154	6.159396824403993e-07	6.210461815215268	0.09643171270550532	
EVEDKES(ph)EGEEEDEDEDLSK	ddPTM_K562_Methotrexat_30min_R1	2	EVEDKESEGEEEDEDEDLSK	20	1	O95218-2;O95218	O95218-2	ZRANB2	Zinc finger Ran-binding domain-containing protein 2	1	EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK	76.57300000000001	0.0048406000000000005	50289000.0	3780.4	2542.0	7220.6	4326.8	2631.0	2017.13	1785.81	3874.1000000000004	3123.0	5276.299999999999	True	False	3614.218142523146	2962.022293387828	5705.0947353373585	3947.4761617903746	2977.0226159814933	2406.9118245090704	2186.3233514650133	3737.8457071392163	2977.812411652551	4320.710941607649	0.8364869095312284	0.6855404893819903	1.320406482275486	0.9136172762164919	0.6890122149374343	0.5570638390388382	0.5060100944062522	0.8650996925400521	0.6891950079272295	1.0	12.077053001574825	-7.731683059135854	5.716740771882911	0.6918465789861259	0.9508259579990094	0.22213714247146266	0.1995769542280257	0.2520771118025515	22.854001340295323	0.06140786779953195	0.07742927777340226	1.854884793556985e-08	7.731683059135854	0.2589793790128835	
EVELVS(ph)E	ddPTM_K562_Methotrexat_30min_R1	2	EVELVSE	7	0	O60832	O60832	DKC1	H/ACA ribonucleoprotein complex subunit 4	1	EVELVS(1)E;EVELVS(1)E	110.31	0.011691	109951000.0	18187.300000000003	15997.3	20616.0	19358.8	17205.0	15924.099999999999	15598.0	17790.5	18168.0	19127.6	True	False	17387.808068858136	18640.58191739303	16288.98333430946	17661.64406047598	19467.75906802036	19001.206954764886	19096.248557322026	17164.798031248618	17323.37364550227	15663.406289766395	1.1100911096342032	1.190072042603642	1.0399387612738988	1.127573640991176	1.2428815742805266	1.2130954533931246	1.2191632014166969	1.0958534633978785	1.1059774180039246	1.0	13.935110366314442	-10.015979570618375	1.5592527965234682	1.0030387621160932	1.1611846908922665	0.4008494486531059	0.05903245011799604	0.45643469450401497	2.506561041019621	0.060709449936940864	0.017793985136322223	9.638743635831343e-11	10.015979570618375	0.15814592877617328	
EVFEDAAEIR	ddPTM_K562_Methotrexat_30min_R1	3	EVFEDAAEIR	10	0	P19338;H7BY16	P19338	NCL	Nucleolin	0	;;	138.66	0.00094236	32808000.0	7144.599999999999	6756.2	9179.9	7290.200000000001	6617.6	6386.799999999999	6697.8	9422.800000000001	9017.699999999999	8461.7	False	True	6830.531938702491	7872.54721423558	7253.164440756085	6651.079484765691	7487.930392823687	7620.958709044299	8199.952146892645	9091.394783106123	8598.469095279923	6929.20413445055	0.9857599525380583	1.1361401773538358	1.0467528882133625	0.9598619633238857	1.0806335399465672	1.0998317499631005	1.1833901827374667	1.312040258405091	1.24090284085154	1.0	12.75847394334238	-8.627059971773164	2.2868689610995228	1.2131998609725285	1.0434051060755054	0.35689553865231716	0.08739622025828174	0.28864045891244117	3.0718803177755185	0.03845019681720342	0.02775882068556284	2.3601522969844083e-09	8.627059971773164	-0.16979475489702311	
EVFGDTLNESRDPDRQPEKYT(ph)SR	ddPTM_K562_Methotrexat_30min_R1	1	EVFGDTLNESRDPDRQPEKYTSR	23	3	Q6ZWB6	Q6ZWB6	KCTD8	BTB/POZ domain-containing protein KCTD8	1	EVFGDTLNESRDPDRQPEKY(0.301)T(0.349)S(0.349)R	50.87	0.0224	196990000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
EVGGGHGCT(ph)SPPFPQEAR	ddPTM_K562_Methotrexat_30min_R1	2	EVGGGHGCTSPPFPQEAR	18	0	A0A1B0GVD3;Q6ZN17-2;Q6ZN17	A0A1B0GVD3	LIN28B	Protein lin-28 homolog B	1	EVGGGHGCT(0.972)S(0.028)PPFPQEAR;EVGGGHGCT(0.5)S(0.5)PPFPQEAR	129.98	2.328e-06	196461000.0	3667.8	3393.7	4822.5	4373.9	3586.5	3921.8999999999996	3161.1	3908.2	3770.0	3930.2	True	False	3506.5679036997158	3954.451241963129	3810.323153361824	3990.446977917839	4058.187613917758	4679.75166922416	3870.057142874129	3770.746390811151	3594.733522872278	3218.4026955833383	1.089536715996364	1.2286999533619212	1.1839174627186297	1.239884301425048	1.2609322069879163	1.4540603249078345	1.2024775980286948	1.1716204426456025	1.1169309321687384	1.0	11.65212913607256	-11.778189303447373	7.7614733747700235	0.9999999999269211	1.2231109442583064	0.31986369233871537	0.09423908532108087	1.2223650548273943e-10	0.0	0.09661828916546784	0.02343337715268791	1.6665206390354502e-12	11.778189303447373	0.22311094433138523	
EVGGGHGCTS(ph)PPFPQEAR	ddPTM_K562_Methotrexat_30min_R1	2	EVGGGHGCTSPPFPQEAR	18	0	A0A1B0GVD3;Q6ZN17-2;Q6ZN17	A0A1B0GVD3	LIN28B	Protein lin-28 homolog B	1	EVGGGHGCT(0.26)S(0.74)PPFPQEAR;EVGGGHGCT(0.155)S(0.845)PPFPQEAR	91.889	0.0024397	614750000.0	3228.7	3199.9	3842.9	3594.8999999999996	3027.3	3080.5	2728.3999999999996	3894.6000000000004	3224.5	3724.1000000000004	True	False	3086.7702139362214	3728.629085999888	3036.327806335753	3279.7406984423137	3425.4430122998	3675.763027370666	3340.3131532117864	3757.6247105197067	3074.593698806805	3049.6294027331733	1.0121787949610406	1.2226499005610891	0.9956382908738028	1.0754554948555086	1.1232325505616554	1.2053146602260367	1.0953177294979164	1.2321578179801145	1.0081860097660582	1.0	11.57441821870675	-5.971980339238579	15.92846298672949	1.1128182447629085	0.7309971029850266	0.09338417151720846	0.08606870339099018	10367690.181548508	161862360.89801657	0.020350026004835424	103989387.37781325	1.0666444077441724e-06	5.971980339238579	-0.38182114177788185	
EVLFT(ph)T(ph)GLIRPVALVVDNT(ph)LGK	ddPTM_K562_Methotrexat_30min_R1	1	EVLFTTGLIRPVALVVDNTLGK	22	1	O75197	O75197	LRP5	Low-density lipoprotein receptor-related protein 5	3	EVLFT(1)T(1)GLIRPVALVVDNT(1)LGK	48.656000000000006	0.018747999999999997	11293000.0	2300.8	1714.4	3016.9	2370.7	1830.2	1534.7	1458.0	2037.5	2335.9	2923.5	True	False	2199.659586900132	1997.6754601825692	2383.6939183778745	2162.8644117491986	2070.903379615859	1831.259054733245	1784.9936143464233	1965.8399701340065	2227.3045188534084	2394.025820705791	0.9188119726510063	0.8344419023825013	0.9956842978724137	0.9034423910731076	0.8650296758308685	0.7649286983017439	0.7456033259575218	0.8211440132063615	0.9303594387285135	1.0	11.225222997178802	-7.869320426258572	3.825216878267308	0.8330157011099373	0.9135692837200053	0.09146389556662049	0.07940562811062268	0.41110118488401615	11.332377966507364	0.025494926334138683	0.0295576873373306	1.3510753601762196e-08	7.869320426258572	0.08055358261006806	
EVLT(ph)PTSTSDNETR	ddPTM_K562_Methotrexat_30min_R1	1	EVLTPTSTSDNETR	14	0	Q70CQ2-3;Q70CQ2-2;Q70CQ2;H7C150;H7C183	Q70CQ2-3	USP34	Ubiquitin carboxyl-terminal hydrolase 34	1	EVLT(0.842)PT(0.064)S(0.067)T(0.02)S(0.006)DNETR	141.65	7.5213e-15	0.0	1381.1	1610.3	2086.7	1578.6	1389.4	1129.7	1369.6	1714.0	1561.7	1689.9	True	False	1320.3884976824465	1876.3747045800244	1648.7301864427425	1440.2065889346122	1572.1304533047082	1347.9985366079018	1676.7676640664354	1653.717648495552	1489.0969078699302	1383.8427345341934	0.9541463525672187	1.3559161440491423	1.1914144181981134	1.0407299565144525	1.13606150039433	0.9740980697937783	1.2116750135128915	1.1950184852848902	1.0760593459857024	1.0	10.434464283273098	-15.953503220906162	0.29055515336624094	4.2908632941648757e-11	1.14018650490222	0.09523219703496666	0.1149467933260467	589.6243712424321	5.710662777004243	357.1883473994811	0.12313851608872375	1.1130041382755874e-16	15.953503220906162	1.1401865048593114	
EVLYDSEGLS(ph)GEER	ddPTM_K562_Methotrexat_30min_R1	1	EVLYDSEGLSGEER	14	0	Q9H7N4	Q9H7N4	SCAF1	Splicing factor, arginine/serine-rich 19	1	EVLYDSEGLS(1)GEER	88.706	0.027125	0.0	940.0	830.9	855.77	976.75	661.74	881.8	673.7	811.68	919.69	948.03	True	False	898.6787255242192	968.1921021148489	676.1555717889994	891.1198440022064	748.7704089318103	1052.1953700813028	824.7943744754365	783.1327543353963	876.9338126393651	776.3325804014739	1.1575950156046202	1.2471357335204925	0.8709612205626243	1.147858361865183	0.9644969537985767	1.3553409925642548	1.0624240116895531	1.0087593566283224	1.1295852251696896	1.0	9.600531024281999	-10.422105658652525	0.7854271319359161	1.0010891662322896	1.1090287114019834	0.05338893115382315	0.13182364574305463	4.944015672005844	5.358404138231739	0.13465731904827255	0.045829928463411676	3.7835052536199155e-11	10.422105658652525	0.10793954516969384	
EVMESAVGNSS(ph)GSGQNEESPRKR	ddPTM_K562_Methotrexat_30min_R1	1	EVMESAVGNSSGSGQNEESPRKR	23	2	Q9NVF7	Q9NVF7	FBXO28	F-box only protein 28	1	EVMESAVGNS(0.025)S(0.672)GS(0.216)GQNEES(0.087)PRKR	52.09	0.018704	27188000.0	3174.0	2336.0	4936.0	3628.5	2422.9	2371.5	2375.1	3128.8	3166.0	4067.8	True	False	3034.4747604402905	2721.98429478913	3900.001054431098	3310.39503860968	2741.5538184194425	2829.758811689509	2907.7766347285256	3018.758330579277	3018.8133510380962	3331.0820022120774	0.9109576883502662	0.8171471891059834	1.170791067839584	0.9937897164979247	0.8230220140479442	0.8495013961860879	0.8729225617374634	0.9062395727798369	0.9062560900732517	1.0	11.701775154353886	-7.742881767898413	24.99295938729796	0.8851244134868135	0.9761425408457722	0.14711990590335156	0.09332280740403158	454.8303735409848	612552.6651146398	0.02864215687141798	0.03690837749405968	1.8076661771203816e-08	7.742881767898413	0.09101812735895876	
EVMESAVGNSSGS(ph)GQNEESPR	ddPTM_K562_Methotrexat_30min_R1	1	EVMESAVGNSSGSGQNEESPR	21	0	Q9NVF7	Q9NVF7	FBXO28	F-box only protein 28	1	EVMESAVGNS(0.073)S(0.073)GS(0.677)GQNEES(0.177)PR	115.2	1.7211e-05	14769000.0	3003.2	2143.5	3541.9	2881.0	2538.7	2651.2	2361.4	3264.6	3423.1	3393.8	True	False	2871.1829239301455	2497.676941729665	2798.503592927374	2628.4272030410607	2872.5835481536346	3163.506878157801	2891.004060986041	3149.782167607104	3263.9608281549313	2779.1499334056143	1.0331155183166936	0.8987197530105805	1.0069638774393304	0.9457666070646805	1.0336194940852024	1.1383001831359238	1.0402476045771878	1.1333617268167	1.1744457500913676	1.0	11.440427953797824	-8.001720708903756	4.071792758016677	1.1015618546474004	0.9692435380814645	0.5164158467697826	0.05737490468465662	0.16124980829881622	6.230847046749857	0.018102759935324376	0.019545617697559716	9.960457600066247e-09	8.001720708903756	-0.13231831656593596	
EVMESAVGNSSGS(ph)GQNEESPRKR	ddPTM_K562_Methotrexat_30min_R1	1	EVMESAVGNSSGSGQNEESPRKR	23	2	Q9NVF7	Q9NVF7	FBXO28	F-box only protein 28	1	EVMESAVGNS(0.001)S(0.005)GS(0.565)GQNEES(0.429)PRKR	68.40100000000001	0.0026603	30242000.0	3977.0	2746.0	5013.4	3918.9	2654.0	3097.8	2611.5	3336.4	3285.5	4374.5	True	False	3802.1758419253397	3199.7298259807135	3961.155852164684	3575.336121484768	3003.04751912386	3696.406007527625	3197.1953524456003	3219.0569209104783	3132.757822121186	3582.235660228314	1.0613974630812	0.893221476606254	1.1057775724091305	0.9980739573277805	0.8383165720963374	1.031871255307652	0.8925139649360274	0.8986167372096652	0.8745258880934482	1.0	11.806644533951165	-7.5496760587465435	24.659764685002457	0.9212238499309008	1.0148552240229176	0.27563074963215106	0.07352959098173972	243.58295915041504	224151.38895706425	0.020843608268013503	0.02690971153227181	2.82048595380576e-08	7.5496760587465435	0.09363137409201683	
EVMESAVGNSSGSGQNEES(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	EVMESAVGNSSGSGQNEESPR	21	0	Q9NVF7	Q9NVF7	FBXO28	F-box only protein 28	1	EVMESAVGNS(0.011)S(0.011)GS(0.006)GQNEES(0.973)PR	141.74	4.6518e-13	13804000.0	2067.4	1982.1	2458.0	2101.8	2367.6	1876.9	1804.3	2378.9	2424.0	2235.4	True	False	1976.5195714348624	2309.6083350605873	1942.099390557464	1917.538457255017	2678.9808991249647	2239.58436165298	2208.9602046400905	2295.232738626643	2311.3087690828656	1830.5473985311182	1.0797423617770707	1.2617036504566235	1.060939144277749	1.047521882685858	1.463486223451331	1.2234506265448708	1.2067211187279943	1.253850482357573	1.2626325715125015	1.0	10.838059414622752	-6.243395408020546	22.693422386328223	1.2061527000394234	1.079741980940087	0.06782821468214362	0.12799246116594762	2894.774322885714	3640473.1140221497	0.03189099840036834	0.8385504781742164	5.709585646700352e-07	6.243395408020546	-0.12641071909933643	
EVPHS(ph)SPPYYEFLWGPR	ddPTM_K562_Methotrexat_30min_R1	2	EVPHSSPPYYEFLWGPR	17	0	Q9UBF1	Q9UBF1	MAGEC2	Melanoma-associated antigen C2	1	EVPHS(0.5)S(0.5)PPYYEFLWGPR;EVPHS(0.974)S(0.026)PPYYEFLWGPR	124.25	0.00011647	79598000.0	3558.5	2880.26	3697.5	3488.13	3000.7200000000003	2685.89	2855.29	3648.2	3258.04	4279.7	True	False	3402.0726008275888	3356.174008950915	2921.445279327185	3182.3310585711956	3395.367276407445	3204.9002296979716	3495.6614657799723	3519.890738180556	3106.5744315275315	3504.6048588590947	0.9707435610687121	0.9576469085999896	0.833601902919876	0.9080427570962126	0.9688302713569793	0.9144826189453237	0.9974481022998885	1.0043616555751844	0.8864264465292273	1.0	11.775036075459877	-8.273741797043781	1.572067580097853	0.9687550442853474	0.9181676936582845	0.14153531359882943	0.04974082106439684	0.7683977622827767	3.7795645697816656	0.02274344591412806	0.020456222050278538	5.32424709927573e-09	8.273741797043781	-0.05058735062706288	
EVPHSS(ph)PPYYEFLWGPR	ddPTM_K562_Methotrexat_30min_R1	3	EVPHSSPPYYEFLWGPR	17	0	Q9UBF1	Q9UBF1	MAGEC2	Melanoma-associated antigen C2	1	EVPHS(0.237)S(0.763)PPYYEFLWGPR;EVPHS(0.251)S(0.749)PPYYEFLWGPR;EVPHS(0.223)S(0.777)PPYYEFLWGPR	150.9	1.2287e-10	281730000.0	5496.01	4595.889999999999	5588.09	4857.61	4563.139999999999	3971.84	4316.07	6363.86	5224.889999999999	6140.91	True	False	5254.411981136559	5355.282705727061	4415.226274768209	4431.750873226064	5163.272892394447	4739.3418674344775	5284.058565893122	6140.039436729817	4981.9860043289455	5028.73169236545	1.0448781725844976	1.0649370523898454	0.8779999699469637	0.8812860069576363	1.0267544995954458	0.942452721156247	1.0507736123435072	1.2209916560176672	0.990704278753334	1.0	12.295978865237247	-8.919049207741882	5.55418271026561	1.0898718755856298	0.9718612696597324	0.21853164511500378	0.08373438381957934	0.266506406457424	13.71965890434354	0.03640073014770991	0.02422489083560821	1.2048994114938577e-09	8.919049207741882	-0.1180106059258974	
EVPIPEHIDIYHLTR	ddPTM_K562_Methotrexat_30min_R1	1	EVPIPEHIDIYHLTR	15	0	C9JHK9;C9JZV3;Q9UG63;Q9UG63-2	C9JHK9	ABCF2	ATP-binding cassette sub-family F member 2	0		132.51	9.4923e-05	7038000.0	5020.9	3631.6	4120.4	5431.3	3933.5	3986.3	4117.9	5754.5	5556.5	6845.8	False	True	4800.18724785591	4231.660173354539	3255.584348597629	4955.1463616372475	4450.824196109159	4756.596057785327	5041.443898845775	5552.110973318348	5298.17952780897	5605.959282841696	0.8562650932103568	0.7548503226390693	0.5807363529310817	0.8839069482369577	0.7939451522118456	0.8484892268739737	0.8993008412095057	0.9903944522593728	0.9450977541034314	1.0	12.452745550499548	-8.627012808664606	0.8497701146144615	0.9916548806113104	0.7483564214832146	0.5867849194696864	0.07586716900166672	0.44134156529031265	0.6452590433951507	0.05859621767832595	0.038733901250716726	2.360408616527803e-09	8.627012808664606	-0.24329845912809578	
EVQAEQPSSSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	EVQAEQPSSSSPR	13	0	A0A1W2PP04;Q9Y388	A0A1W2PP04	RBMX2	RNA-binding motif protein, X-linked 2	1	EVQAEQPSSS(0.001)S(0.999)PR;EVQAEQPSSS(0.007)S(0.993)PR;EVQAEQPS(0.001)S(0.004)S(0.034)S(0.962)PR;EVQAEQPS(0.001)S(0.036)S(0.278)S(0.685)PR	235.93	4.7198e-46	102294300.0	14961.8	13093.300000000001	17670.8	14706.7	14552.099999999999	12784.1	12624.2	15259.1	15008.699999999999	16392.6	True	False	14304.09718675347	15256.745276953136	13961.940565770074	13417.386444624783	16465.956218177227	15254.446394484445	15455.498207292267	14722.428804059778	14310.948812926561	13423.741292458266	1.0655820069170885	1.136549412310612	1.0400930904124455	0.9995265963716796	1.226629436566104	1.1363781573364131	1.1513554880542494	1.0967455706503477	1.0660924179883253	1.0	13.712499196530105	-5.953936598094215	16.50811748599989	1.100381592090858	0.8651456861667345	0.010509416602591082	0.0679798396445623	13775503.749877457	125346672.16683231	0.017238257001556366	102289520.08746897	1.1118940389352682e-06	5.953936598094215	-0.23523590592412347	
EVS(ph)PEVVR	ddPTM_K562_Methotrexat_30min_R1	4	EVSPEVVR	8	0	Q5T200-2;Q5T200;A0A087WX14	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	1	EVS(1)PEVVR;EVS(1)PEVVR;EVS(1)PEVVR;EVS(1)PEVVR	128.27	0.0004346	478964000.0	16764.899999999998	14518.9	20938.800000000003	18474.9	14731.6	14773.099999999999	14396.099999999999	17385.7	16184.3	18923.999999999996	True	False	16027.935069724452	16917.901445896365	16544.03202563247	16855.23420113271	16669.0636144405	17627.792494611134	17624.791887169096	16774.23507669144	15431.895425523013	15496.680222690737	1.0342818487185297	1.0917113344782472	1.0675855594805503	1.087667420306753	1.0756538416552677	1.1375205683601803	1.1373269393119638	1.0824405508561805	0.99581944027774	1.0	13.919671566711422	-9.741015964567563	5.661162431406843	0.9966581076709509	1.0917346690440874	0.614555732537529	0.028945171905930156	0.10762444654094817	10.435030873908962	0.02422084961616382	0.007924275644375926	1.815448926051965e-10	9.741015964567563	0.09507656137313658	
EVSPDPSTTGAAS(ph)PASSSAGGSAAR	ddPTM_K562_Methotrexat_30min_R1	1	EVSPDPSTTGAASPASSSAGGSAAR	25	0	P23769-2;P23769	P23769-2	GATA2	Endothelial transcription factor GATA-2	1	EVSPDPSTTGAAS(0.999)PASSSAGGSAAR	226.23	7.442499999999999e-60	8144500.0	2760.7	2190.7	2891.6	2173.7	2200.5	1988.0	2276.0	2729.5	2479.8	2575.8	True	False	2639.3429335688443	2552.675939466843	2284.6926760520605	1983.1350958869684	2489.9043202080084	2372.1528642794647	2786.4509370730184	2633.501937904672	2364.5146392622482	2109.297659987676	1.2512899358093752	1.2102018543375037	1.0831532786441385	0.9401874062186915	1.1804423659307317	1.1246174066742787	1.3210325834663368	1.2485207696670269	1.1209961894501241	1.0	11.042546984481373	-8.619280941429052	22.775416929990882	1.1975602038530946	1.1264918244871984	0.010983089579327032	0.11172289744412067	22.042346384111607	5182.555203148584	0.04401688630680236	0.03409533563676247	2.4028079410035895e-09	8.619280941429052	-0.07106837936589616	
EVSPGS(ph)RDILDGVR	ddPTM_K562_Methotrexat_30min_R1	2	EVSPGSRDILDGVR	14	1	Q96RL1-2;Q96RL1-3;Q96RL1;Q96RL1-4	Q96RL1-2	UIMC1	BRCA1-A complex subunit RAP80	1	EVS(0.316)PGS(0.684)RDILDGVR;EVS(0.315)PGS(0.685)RDILDGVR	156.29	9.5759e-08	64171000.0	2199.08	2254.69	3276.4	2298.8	2118.33	2090.8	1788.87	2297.27	2185.1000000000004	2485.3	True	False	2102.411076304043	2627.239199322819	2588.728414655197	2097.267773117249	2396.9275249380735	2494.817509373994	2190.069634359319	2216.4737119949687	2083.5151779385183	2035.1880869506062	1.033030357137241	1.290907320148136	1.2719848505667992	1.0305031690017696	1.1777425095532443	1.225841250433058	1.076101834715816	1.0890756123263226	1.0237457615331869	1.0	10.990946415552465	-9.325451863655442	1.1465474109784257	1.0042990839530022	1.1758869462554071	0.3458983691181172	0.08441089671620514	0.5726737609545228	1.3239867600182071	0.07537191943151329	0.02844793144904752	4.726592226119382e-10	9.325451863655442	0.17158786230240497	
EVSSRPS(ph)TPGLS(ph)VVSGISATSEDIPNKIEDLR	ddPTM_K562_Methotrexat_30min_R1	1	EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR	32	2	Q14C86-4;Q14C86-2;Q14C86-6;F8W9S7;Q14C86-3;Q14C86-5;Q14C86;H0Y4E7;H0Y7I9;C9IZ08	Q14C86-4	GAPVD1	GTPase-activating protein and VPS9 domain-containing protein 1	2	EVS(0.196)S(0.196)RPS(0.445)T(0.445)PGLS(0.665)VVS(0.029)GIS(0.015)AT(0.007)S(0.003)EDIPNKIEDLR	51.386	0.0047883000000000005	28069000.0	1313.6	957.97	1651.7	1007.3	1128.7	921.19	991.23	1234.1	1635.1	1775.9	True	False	1255.8557168602279	1116.258259794153	1305.0307418160146	918.9915729341416	1277.1438337735879	1099.19693010342	1213.538559909881	1190.6960035054615	1559.0845578908388	1454.2673011771542	0.8635659454377318	0.7675743371872555	0.8973802414175576	0.6319275501761371	0.8782043251194646	0.7558424295270044	0.834467335494365	0.8187600742598383	1.0720756470484074	1.0	10.506076752433936	-9.744818853575033	11.84027013435366	1.0360585842991334	0.8035747024470129	0.6070775816562317	0.07401839520441408	0.30480797407107824	217.77250378577187	0.048400474399016395	0.017512136768972904	1.7996213897882846e-10	9.744818853575033	-0.23248388185212054	
EVSSRPST(ph)PGLS(ph)VVSGISATSEDIPNKIEDLR	ddPTM_K562_Methotrexat_30min_R1	1	EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR	32	2	Q14C86-4;Q14C86-2;Q14C86-6;F8W9S7;Q14C86-3;Q14C86-5;Q14C86;H0Y4E7;H0Y7I9;C9IZ08	Q14C86-4	GAPVD1	GTPase-activating protein and VPS9 domain-containing protein 1	2	EVS(0.173)S(0.173)RPS(0.364)T(0.661)PGLS(0.568)VVS(0.057)GIS(0.003)AT(0.001)SEDIPNKIEDLR	65.744	0.00029257	23631000.0	887.82	708.65	1098.8	617.53	712.97	657.88	741.93	810.08	1113.0	1193.9	True	False	848.7924958456521	825.7423675095537	868.1768959904564	563.3921036771771	806.7380518876181	785.0059991711138	908.3266888148444	781.5890272422853	1061.2568729328505	977.6731408724615	0.8681761422720499	0.8445996243413959	0.8880032187605233	0.5762581379441539	0.8251613122640319	0.802932970492148	0.9290699016281316	0.799437966092437	1.0854925113170235	1.0	9.933208408674055	-9.757349421988271	24.999031819808135	1.0427463069457197	0.8155647475553205	0.49565068017007563	0.09120067372178546	80.42751262677822	491621.00616218674	0.06864621018248612	0.023817856678934508	1.7484393739378285e-10	9.757349421988271	-0.2271815593903992	
EVTIPDLEPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	EVTIPDLEPSR	11	0	A0A140T956;A0A140T8Z8;A0A140T9C0;A0A140T902;A0A140T8Y3;A0A140TA52;A0A140TA41;A0A140TA33;A0A3B3ISX9;P22105-1;P22105;P22105-4	A0A140T956	TNXB	Tenascin-X	1	EVTIPDLEPS(1)R	82.45200000000001	0.027885000000000004	72524000.0	6861.2	6610.0	7532.1	6954.0	7483.2	6738.3	6619.4	7616.5	7710.7	7932.8	True	False	6559.589863368905	7702.19014921068	5951.215142236723	6344.353616781514	8467.371964999122	8040.38110934321	8103.9689511692195	7348.6233779266995	7352.231240002987	6496.093049596334	1.0097746158018037	1.1856649974694087	0.9161222132750285	0.9766414317565465	1.3034560774226107	1.2377256680217716	1.2475142965621158	1.1312373948189276	1.1317927843505649	1.0	12.665356582399115	-7.746623729504783	24.999715329584287	1.1885828153325153	1.0261711949538372	0.35253065213346146	0.10071347668524838	262.8131226045809	443465.26597243577	0.030107749344417283	0.03870224599889252	1.7921578979398876e-08	7.746623729504783	-0.16241162037867807	
EVVKPVPITS(ph)PAVSK	ddPTM_K562_Methotrexat_30min_R1	2	EVVKPVPITSPAVSK	15	1	Q96HC4;A0A0D9SFR4	Q96HC4	PDLIM5	PDZ and LIM domain protein 5	1	EVVKPVPIT(0.066)S(0.932)PAVS(0.002)K;EVVKPVPIT(0.079)S(0.844)PAVS(0.077)K	134.52	5.4712e-05	185855000.0	12394.5	7946.0	17270.7	12825.7	7857.8	7078.4	7405.4	10635.2	11849.9	15815.9	True	False	11849.65262075525	9258.941441093499	13645.816088080059	11701.290794183868	8891.238430961374	8446.200620983776	9066.249459314824	10261.15398791125	11299.000735459997	12951.48725079551	0.9149260151591794	0.7148940706037288	1.0536099695609786	0.9034708190339413	0.6865032763256786	0.6521413685879969	0.7000160895620658	0.7922761138710912	0.872409516888957	1.0	13.660830155156063	-6.198579156841999	20.54679569240719	0.8098119553517156	0.9149340304524801	0.041546581215078926	0.13028295852830574	31337.4953135587	10239438.895452585	0.0342365563043184	53.87417003730668	6.330249726681083e-07	6.198579156841999	0.10512207510076454	
EVYELLDS(ph)PGKVLLQSK	ddPTM_K562_Methotrexat_30min_R1	2	EVYELLDSPGKVLLQSK	17	1	E9PBS1;P22234;P22234-2	E9PBS1	PAICS	Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase	1	EVYELLDS(1)PGKVLLQSK;EVYELLDS(0.999)PGKVLLQS(0.001)K	90.96799999999999	0.0043081000000000005	20969300.0	5050.4	3229.3	7961.1	4975.7	3446.3	2996.3	3026.7	4553.4	4372.5	6799.1	True	False	4828.39046317821	3762.8869362853347	6290.173904868602	4539.488106272615	3899.548856502095	3575.292569034487	3705.5145216339643	4393.254341108311	4169.2234293790525	5567.717105373949	0.8672118880677068	0.6758401810058567	1.129758173021639	0.8153230525830975	0.7003855947958021	0.6421469520395751	0.6655357036831863	0.7890584700986245	0.7488209890109048	1.0	12.442870194655761	-4.69382884939613	18.008763545619267	0.792230309448526	0.8524724078955264	0.0	0.1502337829827984	0.0	0.0	0.03510709994674727	0.0	2.0238165850518515e-05	4.69382884939613	0.06024209844700035	
EWQHEEFYR	ddPTM_K562_Methotrexat_30min_R1	2	EWQHEEFYR	9	0	I3L239;I3L0K7;Q12931-2;Q12931	I3L239	TRAP1	Heat shock protein 75 kDa, mitochondrial	0	;	131.12	0.001633	42011000.0	13923.199999999999	10941.400000000001	13705.5	13864.8	12357.400000000001	12350.1	10086.7	14295.7	14700.8	18466.6	False	True	13311.152799168949	12749.280377999059	10828.902846739345	12649.294510490705	13982.614699631204	14736.582036789638	12348.899238565213	13792.912128120099	14017.363016721685	15122.119794987357	0.880243840124934	0.8430881748619106	0.7160968828145962	0.8364762799117398	0.9246464708119907	0.9745050453623892	0.8166116527299695	0.9121017631861467	0.926944317777996	1.0	13.884372768007765	-7.683271089016833	4.783771381361114	0.9183891835149115	0.8105932574790227	0.4357858294071525	0.05943219561234264	0.21284664645080828	8.837239260279617	0.01828841091432989	0.023561805569324065	2.0736187491078658e-08	7.683271089016833	-0.10779592603588883	
EWSLES(ph)SPAQNWTPPQPR	ddPTM_K562_Methotrexat_30min_R1	1	EWSLESSPAQNWTPPQPR	18	0	F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;E5RHT6;E5RHC5;F8W1U7;Q8N6T3-3	F8VWH9	ARFGAP1	ADP-ribosylation factor GTPase-activating protein 1	1	EWS(0.022)LES(0.523)S(0.274)PAQNWT(0.181)PPQPR	95.755	0.0016838	39093000.0	658.19	884.14	767.16	773.1	649.15	717.36	758.17	975.72	901.9	938.41	True	False	629.2567556944537	1030.2291071895813	606.1435998617018	705.3235233151836	734.5246032551825	855.979667363942	928.2089222146975	941.4033745566396	859.9708658563678	768.4548556211797	0.8188597561606851	1.340650136639187	0.7887823148332197	0.9178464006776768	0.955846134463462	1.1138971419108434	1.2078899826384475	1.2250600899589048	1.119090938870067	1.0	9.58581669824706	-8.360242221030601	4.179054342996673	1.1568975203938408	0.9730243327612671	0.23213376002634034	0.1516203612604788	0.34254030942349195	10.487873891853704	0.05439345879139759	0.04767901258562626	4.362724401661608e-09	8.360242221030601	-0.18387318763257365	
EWSLESSPAQNWT(ph)PPQPR	ddPTM_K562_Methotrexat_30min_R1	1	EWSLESSPAQNWTPPQPR	18	0	F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;E5RHT6;E5RHC5;F8W1U7;Q8N6T3-3	F8VWH9	ARFGAP1	ADP-ribosylation factor GTPase-activating protein 1	1	EWSLESSPAQNWT(1)PPQPR	185.71	2.8285e-12	46354000.0	1005.5	891.28	1333.7	1208.5	1110.0	1012.1	953.86	1245.8	1131.1	1273.2	True	False	961.299423951705	1038.5488708303321	1053.774596088889	1102.552681317293	1255.984456001314	1207.6740009744694	1167.7873861320163	1201.984507873838	1078.5154078835094	1042.6111424397502	0.9220114622046215	0.9961037519703537	1.0107072073131846	1.0574917497402505	1.2046528229712392	1.158316798867568	1.1200603356293977	1.1528598333038607	1.0344368710272382	1.0	10.025985467948313	-7.196000603227136	1.875979333359363	1.1215031079823463	0.9590033974990299	0.5052314592250129	0.059814927613395685	0.2682027454000746	1.8302811957215182	0.01811949328704547	0.03964270017598784	6.367946364111336e-08	7.196000603227136	-0.16249971048331646	
EWY(ph)QETHEK	ddPTM_K562_Methotrexat_30min_R1	1	EWYQETHEK	9	0	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	EWY(1)QETHEK	76.47800000000001	0.031606	4573700.0	0.0	116.55	0.0	120.76	0.0	0.0	0.0	0.0	0.0	131.16	True	False	0.0	135.80790648872994	0.0	110.17315829199536	0.0	0.0	0.0	0.0	0.0	107.40565303361429	0.0	1.2644390928494864	0.0	1.0257668491388898	0.0	0.0	0.0	0.0	0.0	1.0	6.7469261178180915	-13.02961979461522	9.416475364586319	2.3885845795242875	0.26943599317510586	0.19397648566597792	0.4549986607642187	0.04312804618453669	0.000135660596411485	0.0014324638256446713	0.10734335758447897	9.340716809130469e-14	13.02961979461522	-2.1191485863491817	
EY(ph)LEQMETPQK	ddPTM_K562_Methotrexat_30min_R1	1	EYLEQMETPQK	11	0	A8MXQ7	A8MXQ7		Putative IQ motif and ankyrin repeat domain-containing protein LOC642574	1	EY(1)LEQMETPQK	110.54	0.00096179	29668000.0	154.96	149.98	160.25	123.37	169.11	199.52	214.31	60.873999999999995	225.88	110.48	True	False	148.148143943865	174.76164577588762	126.61571494582323	112.55434364428174	191.35092914809204	238.07441623794696	262.37447290163385	58.733026916288324	215.37888810249072	90.47100142691147	1.6375207702718864	1.9316868722523401	1.39951711541639	1.2440930449433643	2.115052626035958	2.6314997345340476	2.900094712819085	0.6491917408887841	2.3806400360947504	1.0	6.499383535683082	-7.7806084859499025	24.88994280447197	2.010511207636549	1.5692611515482129	0.07155821491814818	0.6685651019982274	607.2973953009248	788535.4973382985	0.21050650731597828	0.2390650316451913	1.6572633038627463e-08	7.7806084859499025	-0.4412500560883361	
EY(ph)MS(ph)PDIALLY(ph)LK	ddPTM_K562_Methotrexat_30min_R1	1	EYMSPDIALLYLK	13	0	Q7RTY7	Q7RTY7	OVCH1	Ovochymase-1	3	EY(1)MS(1)PDIALLY(1)LK	97.95700000000001	0.0031198	22804000.0	359.04	192.9	412.05	391.57	349.62	353.64	469.72	578.72	545.27	471.08	True	False	343.25703150235717	224.7734462606264	325.5663359964211	357.2416660516449	395.6011581145758	421.97592501196647	575.0666670307287	558.3660895783812	519.9205167152693	385.76284714146846	0.889813609698076	0.5826726133068917	0.8439546172185632	0.9260655055271195	1.0255035212592658	1.093873938713486	1.4907258988054854	1.4474335559163245	1.3477723958331373	1.0	8.59157039374806	-8.053562395880496	1.181941001092807	1.350623993937315	0.758284051693872	0.6772134042583023	0.15513222596342524	0.24700835304968274	0.7221141167052194	0.07140813051077423	0.07795855043921499	8.839701584714934e-09	8.053562395880496	-0.592339942243443	
EY(ph)T(ph)AAVEAKQPR	ddPTM_K562_Methotrexat_30min_R1	1	EYTAAVEAKQPR	12	1	U3KPZ5	U3KPZ5	PHB2		2	EY(1)T(1)AAVEAKQPR	72.321	0.033725	6231600.0	2208.4	1984.6	2099.9	2370.5	2056.0	1916.8	2129.2	2084.4	2265.9	2380.3	True	False	2111.321380263496	2312.521417567854	1659.1596868314148	2162.6819454386796	2326.400037422254	2287.1944719571816	2606.7273001827207	2011.0904705508326	2160.5588035746123	1949.2046044214105	1.0831707330643245	1.186392342970218	0.85119832113464	1.109520232269632	1.1935124881940282	1.1733988657573984	1.337328720786849	1.0317492919876372	1.1084309972764192	1.0	10.928669820250823	-5.8615289068051215	10.977591190604954	1.1159088207320733	0.0003341470052410885	0.0023299452784065755	0.1241000424691327	744683.175401943	895393.9042385258	0.03187894048717353	20074146.99603522	1.3755332512143171e-06	5.8615289068051215	-1.1155746737268322	
EYFNRY(ph)REVPPPY(ph)DMK	ddPTM_K562_Methotrexat_30min_R1	1	EYFNRYREVPPPYDMK	16	2	A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8	A0A2R8Y880	RBBP6	E3 ubiquitin-protein ligase RBBP6	2	EY(0.218)FNRY(0.782)REVPPPY(1)DMK	47.64	0.034035	0.0	304.18	447.54	606.03	564.31	513.52	551.6	359.04	368.78	463.2	478.82	True	False	290.808611414848	521.4883781206878	478.8325848899671	514.8378184477964	581.0568809421574	658.1888933282453	439.5638595987244	355.8097983735062	441.66593310197305	392.1010581393349	0.7416674996870521	1.329984623340074	1.2211968699146223	1.3130232825458135	1.4819059242009904	1.6786205486197767	1.121047368973239	0.9074441167334661	1.126408419293337	1.0	8.615081724948052	-8.99026348554147	24.98062378331012	1.0130048349052574	1.3102072941142309	0.23989719210121951	0.22824126173452156	286.7496158611309	735701.3580594631	0.09922776216072844	0.06681161381503918	1.0226723508816561e-09	8.99026348554147	0.2972024592089735	
EYGS(ph)PLK	ddPTM_K562_Methotrexat_30min_R1	1	EYGSPLK	7	0	P21127;P21127-9;P21127-8;P21127-2;P21127-6;A0A0D9SER5;A0A0D9SEI3;P21127-3;A0A0D9SEN2;Q5QPR4;Q9UQ88;Q9UQ88-2;Q9UQ88-4;Q9UQ88-3;Q5QPR3;P21127-10;P21127-5;P21127-4;P21127-12;Q9UQ88-10;Q9UQ88-5	P21127	CDK11B;CDK11A	Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A	1	EYGS(1)PLK	105.1	0.011495	33070000.0	3395.0	3247.9	5326.4	3822.3	2963.1	2196.5	1806.5	2563.3	2644.6	3282.8	True	False	3245.759865058218	3784.560270139392	4208.461429562766	3487.2048935035937	3352.7995870067507	2620.9425384254737	2211.6536106425333	2473.147286107729	2521.6531232328966	2688.253109017603	1.207386259192071	1.407813965673204	1.5655004416978835	1.2972011012675664	1.2472038349960284	0.9749612228229776	0.8227103330499863	0.9199830469131375	0.9380266741900696	1.0	11.392453264271847	-8.14320595548403	2.06111239642244	0.9089068212589808	1.3882040141764762	0.8334446588614632	0.09397170291093367	0.1259104290761908	1.054040288521715	0.0372992907107769	0.03713534683447715	7.19107874582321e-09	8.14320595548403	0.4792971929174954	
EYIPGQPPLS(ph)QSS(ph)DSSPTR	ddPTM_K562_Methotrexat_30min_R1	1	EYIPGQPPLSQSSDSSPTR	19	0	V9GYZ6;P07814	V9GYZ6	EPRS	Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase	2	EYIPGQPPLS(0.732)QS(0.273)S(0.853)DS(0.094)S(0.043)PT(0.005)R	120.79	0.00015207	40795000.0	4086.2	4281.3	5218.3	3998.3	4027.3	3747.1	4066.1	4374.6	4953.1	4372.3	True	False	3906.5755406777294	4988.712055342763	4123.050142288859	3647.775246761222	4556.960540228909	4471.1740431295675	4978.026430242798	4220.742838453116	4722.83146210575	3580.4341015467494	1.0910899153234204	1.3933260364120754	1.1515503498605657	1.0188080951372298	1.2727396765270165	1.2487798731438788	1.390341586818282	1.178835503949019	1.3190667187717502	1.0	11.805918799017958														
EYIPGQPPLS(ph)QSSDS(ph)SPTR	ddPTM_K562_Methotrexat_30min_R1	1	EYIPGQPPLSQSSDSSPTR	19	0	V9GYZ6;P07814	V9GYZ6	EPRS	Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase	2	EYIPGQPPLS(0.807)QS(0.194)S(0.353)DS(0.373)S(0.271)PT(0.003)R	154.75	1.1344e-14	44860000.0	1912.5	1626.3	2204.9	1821.8	1798.6	1769.2	1780.7	2087.2	2070.1	2120.3	True	False	1828.4287899628403	1895.0184326265248	1742.1216217413153	1662.0856225269713	2035.1474257333005	2111.072860907055	2180.067303886609	2013.7919929637783	1973.8615028376391	1736.2931238729216	1.053064580411632	1.0914161938276616	1.0033568628408738	0.9572609599579446	1.1721220327094102	1.2158504989054852	1.2555871320988812	1.1598225928994503	1.1368250416351386	1.0	10.76179481116537	-7.781027716514494	24.70958670101636	1.1725941630071628	1.0292906466020149	0.438574655826912	0.07090562962303565	179.71406006913145	226698.03989066402	0.022010986092403227	0.02499444057346205	1.6556642962098147e-08	7.781027716514494	-0.14330351640514793	
EYIPGQPPLSQS(ph)SDS(ph)SPTR	ddPTM_K562_Methotrexat_30min_R1	1	EYIPGQPPLSQSSDSSPTR	19	0	V9GYZ6;P07814	V9GYZ6	EPRS	Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase	2	EYIPGQPPLS(0.122)QS(0.872)S(0.256)DS(0.623)S(0.116)PT(0.011)R	141.3	3.293e-17	0.0	2359.4	1896.6	2840.2	1755.4	2254.7	1802.4	1598.0	2247.8	2400.0	2386.9	True	False	2255.683601065792	2209.980913312099	2244.080833629499	1601.5068074343212	2551.2325702217668	2150.6882910348627	1956.392178138262	2168.743599934831	2288.424523844421	1954.609280466103	1.1540329945266063	1.1306509875902662	1.148096888752297	0.8193488199607956	1.305239157369288	1.1003162179410106	1.000912150417977	1.1095535161982166	1.170783617326689	1.0	10.932664531340537	-12.709073941278763	2.5051369009536866	0.9811660250333835	1.1009094352918283	0.06391803203729207	0.11912903793768537	23879654.02681419	18516255.131687768	2828608.6516709365	0.02941062202434985	1.9540067459122179e-13	12.709073941278763	0.11974341025844482	
EYIPGQPPLSQSS(ph)DSSPTR	ddPTM_K562_Methotrexat_30min_R1	1	EYIPGQPPLSQSSDSSPTR	19	0	V9GYZ6;P07814	V9GYZ6	EPRS	Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase	1	EYIPGQPPLS(0.001)QS(0.023)S(0.524)DS(0.269)S(0.141)PT(0.041)R	135.79	3.3313999999999996e-08	826630000.0	7151.5	5926.6	7687.7	6899.7	6871.7	6796.6	5511.0	7216.8	7995.9	7199.8	True	False	6837.128622964315	6905.869915024514	6074.156828636539	6294.814013475324	7775.448996670476	8109.946759236319	6746.982036120128	6962.981053478818	7624.172354253171	5895.846452511556	1.159651744331263	1.1713110188076048	1.0302433887247904	1.0676692590584365	1.3188011355618383	1.375535612156518	1.144361897899495	1.180997692114705	1.2931429635528195	1.0	12.525483236997939	-7.747395655036183	24.99977137286431	1.2319706647444904	1.1062986037795333	0.20724083905232082	0.10503629475809434	348.0127777124146	619508.3084350071	0.031238744226715486	0.04012874381561575	1.7889753023324744e-08	7.747395655036183	-0.1256720609649571	
EYIPGQPPLSQSSDS(ph)SPTR	ddPTM_K562_Methotrexat_30min_R1	2	EYIPGQPPLSQSSDSSPTR	19	0	V9GYZ6;P07814	V9GYZ6	EPRS	Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase	1	EYIPGQPPLSQS(0.001)S(0.001)DS(0.497)S(0.497)PT(0.004)R;EYIPGQPPLSQS(0.001)S(0.003)DS(0.689)S(0.24)PT(0.067)R	145.99	3.6699999999999995e-12	375300000.0	12088.7	10343.7	13355.5	12566.5	11314.7	11525.7	10402.9	12611.5	12634.7	12604.4	True	False	11557.295222600671	12052.82061216195	10552.363063706345	11464.814455749913	12802.781373259519	13752.878404338939	12736.015137643624	12167.946396733758	12047.31555475713	10321.62102086679	1.11971706762298	1.1677255527785089	1.0223552136212977	1.110757160389049	1.2403847561712127	1.3324339632830267	1.2339161757533776	1.1788794000607392	1.1671922007600912	1.0	13.33338194479834	-7.739536018415445	14.532117734488864	1.2101805098388982	1.1036830031823468	0.1787255867192984	0.08628323705330747	3.0656654133055254	2030.7493135996322	0.02543704803333281	0.03261709073702441	1.8216459877670377e-08	7.739536018415445	-0.10649750665655144	
EYIPGQPPLSQSSDSS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	1	EYIPGQPPLSQSSDSSPTR	19	0	V9GYZ6;P07814	V9GYZ6	EPRS	Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase	1	EYIPGQPPLSQS(0.003)S(0.034)DS(0.457)S(0.497)PT(0.009)R	209.23	6.6777e-27	57328000.0	6492.7	6550.1	8144.4	5582.6	6628.3	5280.8	6061.0	6920.7	6724.5	6372.5	True	False	6207.288682139471	7632.392692336596	6435.0017398113105	5093.182125545654	7500.037630372527	6301.239862015587	7420.333536730915	6677.295058309901	6411.879462746589	5218.378499212467	1.1895052616586255	1.4625985243286665	1.2331420077678248	0.9760085678557607	1.4372352698265174	1.2075091645741183	1.4219615418564897	1.2795727752054793	1.228711076384022	1.0	12.34938587410932	-10.212250529873375	3.021192894396944	1.0000560849098856	1.2781973393496169	0.2670791135788102	0.13645937528024485	1.6407498861749883	21.270535725134305	0.130215975630416	0.034708761666777964	6.134080486186389e-11	10.212250529873375	0.27814125443973126	
EYIPGQPPLSQSSDSSPT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	EYIPGQPPLSQSSDSSPTR	19	0	V9GYZ6;P07814	V9GYZ6	EPRS	Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase	1	EYIPGQPPLS(0.001)QS(0.053)S(0.168)DS(0.257)S(0.125)PT(0.396)R	142.84	3.3068e-09	723630000.0	2567.1	2371.0	3488.6	2268.9	2350.4	2147.0	1746.2	2794.5	2660.4	2613.9	True	False	2454.253357758748	2762.767449890852	2756.3905345397757	2069.989059694504	2659.5187976445823	2561.8773639879314	2137.829800666479	2696.2158510623226	2536.7185846815405	2140.497380791129	1.1465808740451036	1.2907128383729818	1.2877336638090218	0.9670598423855274	1.2424770156278455	1.1968607796385435	0.9987537568844563	1.2596211867663203	1.1851070725178685	1.0	11.063730354851458	-15.999999999999998	0.19251668618223633	0.26883209746587666	1.2050091475454303	0.1917104069058272	0.10677928327593977	242.5411564746646	2.3797117739824456	68.55870977321493	0.2860906374458219	1.000000000000004e-16	15.999999999999998	0.9361770500795537	
EYS(ph)PPYAPSHQQYPPSHATPLPK	ddPTM_K562_Methotrexat_30min_R1	1	EYSPPYAPSHQQYPPSHATPLPK	23	0	Q9UPT8	Q9UPT8	ZC3H4	Zinc finger CCCH domain-containing protein 4	1	EY(0.002)S(0.991)PPY(0.006)APS(0.002)HQQYPPSHATPLPK	85.40700000000001	0.00047206	22163000.0	2815.2	1958.8	4598.6	3837.3	2343.7	1765.9	1957.2	2922.7	3141.0	4192.1	True	False	2691.4471788252995	2282.4584060928723	3633.41670358729	3500.889866792594	2651.9376302074584	2107.1351826112204	2396.1519218098906	2819.9069843978696	2994.975595581386	3432.8700677204497	0.7840224435329468	0.6648834243844561	1.058419524162186	1.0198142655359257	0.7725132550584535	0.6138115166154351	0.6980025094282181	0.8214429701006395	0.8724407089401315	1.0	11.745199537761858														
EYVSNDAAQS(ph)DDEEKLQSQPTDTDGGR	ddPTM_K562_Methotrexat_30min_R1	1	EYVSNDAAQSDDEEKLQSQPTDTDGGR	27	1	Q5JSH3-4;Q5JSH3-2;Q5JSH3;H7BY83	Q5JSH3-4	WDR44	WD repeat-containing protein 44	1	EYVS(0.002)NDAAQS(0.795)DDEEKLQS(0.195)QPT(0.008)DT(0.001)DGGR	90.762	3.1590999999999996e-05	31984000.0	1216.1	693.29	1673.1	1270.8	1095.4	806.62	1048.4	1044.5	1454.1	1601.9	True	False	1162.6417001170248	807.844388584913	1321.9391742643181	1159.390937044284	1239.464300093548	962.4878990870726	1283.5303877097335	1007.7643429717639	1386.499208384238	1311.7803872716283	0.8863081895401737	0.6158381360352156	1.0077442741874034	0.8838300589748113	0.9448718033294502	0.7337263984324014	0.9784643833403761	0.7682416605326846	1.0569598553520207	1.0	10.357310494927399	-3.000000000164221	0.04759079639913835	1.2816495300346047	0.15731795698475295	0.15241777049456495	0.1232015654779468	1033.9004170614007	3.730901120985499	21.54235587970454	87.05619635521792	0.000999999999621867	3.000000000164221	-1.1243315730498518	
EYVSNDAAQSDDEEKLQS(ph)QPTDTDGGR	ddPTM_K562_Methotrexat_30min_R1	1	EYVSNDAAQSDDEEKLQSQPTDTDGGR	27	1	Q5JSH3-4;Q5JSH3-2;Q5JSH3;H7BY83	Q5JSH3-4	WDR44	WD repeat-containing protein 44	1	EYVS(0.002)NDAAQS(0.066)DDEEKLQS(0.906)QPT(0.026)DTDGGR	78.122	0.00031452	34166000.0	1083.2	585.11	1225.4	873.37	701.64	804.86	592.43	688.07	744.13	1334.4	True	False	1035.5838249870583	681.7894823305085	968.2052860818208	796.8030080944018	793.9179582961817	960.3878039959599	725.2975081942743	663.8701880982114	709.5355587201449	1092.7272293996255	0.9477057010431017	0.6239338272050771	0.8860448060892374	0.7291874739244737	0.7265472452190856	0.8788907040631022	0.6637498258305257	0.6075351379895237	0.6493254122622929	1.0	10.093717599757056	-8.786982992485012	24.99536617760978	0.6974471774279659	0.7883019911848989	0.033989678397846834	0.13437567406853973	556.7417895018392	544786.5946989006	0.052699160709735675	0.035543865897004596	1.6331159015029582e-09	8.786982992485012	0.09085481375693294	
FADLSEAANR	ddPTM_K562_Methotrexat_30min_R1	1	FADLSEAANR	10	0	P08670;B0YJC4;B0YJC5	P08670	VIM	Vimentin	0		124.92	0.024361	11422000.0	1197.3	1152.5	1451.4	1175.3	1065.1	1014.6	848.72	944.8	1319.1	1486.0	False	True	1144.6681256065406	1342.931035849517	1146.7709745545578	1072.2632737709682	1205.1793189972961	1210.6570905925262	1039.0670647243462	911.5708484822624	1257.7753289179898	1216.8710003655895	0.9406651364545981	1.1035935899910958	0.9423932152299043	0.881164292228859	0.9903920124936985	0.9948935345067831	0.8538843183970817	0.7491105040784072	1.0336143506913316	1.0	10.24896052173835	-8.755176459821895	24.99643893832272	0.8882448328160393	0.9762203907078173	0.09670046304043878	0.09076238154910406	266.8860551724923	1065194.9614655748	0.03515468089955462	0.026545763253372164	1.7572094905023019e-09	8.755176459821895	0.08797555789177802	
FADLSEAANRNNDALR	ddPTM_K562_Methotrexat_30min_R1	2	FADLSEAANRNNDALR	16	1	P08670;B0YJC4;B0YJC5	P08670	VIM	Vimentin	0	;	109.95	0.0033434	45706000.0	3681.3	3491.7	4605.799999999999	4661.0	3582.0	3192.6000000000004	3882.4	3933.5	3604.3999999999996	4562.0	False	True	3519.4744598641605	4068.644076247949	3639.105521981107	4252.377366669348	4053.095785042078	3809.5247658443736	4753.127029038792	3795.156575470976	3436.83223072701	3735.7775933161674	0.9420995688182819	1.0891023286630679	0.974122637410744	1.1382844027646213	1.0849403327151053	1.0197407823902982	1.272326017893251	1.015894678061415	0.9199777408794322	1.0	11.867192852511893	-3.0232433930634843	22.870256064987252	1.0545526003158998	0.005258334184827795	0.0	0.09972999247652596	0.0	0.0	0.02259541988362062	0.0	0.0009478870869832856	3.0232433930634843	-1.049294266131072	
FAIVMMGR	ddPTM_K562_Methotrexat_30min_R1	3	FAIVMMGR	8	0	Q93009;A0A669KBL1;Q93009-3	Q93009	USP7	Ubiquitin carboxyl-terminal hydrolase 7	0	;;	94.15100000000001	0.009243000000000001	15452800.0	0.0	65.40899999999999	60.957	123.93	0.0	116.708	0.0	0.0	178.74699999999999	130.92	False	True	0.0	76.21672548709853	48.162958726692956	113.06524931373787	0.0	139.26016925771003	0.0	0.0	170.4370909848411	107.20911935926179	0.0	0.7109164401555563	0.4492431149004878	1.0546234311920049	0.0	1.2989582424517823	0.0	0.0	1.5897629978071175	1.0	6.7442838184697935	-9.768849077079059	24.999850564204895	1.2948816397865266	0.46849881961571826	0.3519678950133346	0.46305703009957955	204.17142065129647	688832.2960876164	0.397924997918572	0.11093021646504764	1.7027501331725656e-10	9.768849077079059	-0.8263828201708083	
FAQSAPGS(ph)PLSSQPVLITVQR	ddPTM_K562_Methotrexat_30min_R1	2	FAQSAPGSPLSSQPVLITVQR	21	0	Q01167-2;Q01167	Q01167-2	FOXK2	Forkhead box protein K2	1	FAQS(0.001)APGS(0.898)PLS(0.089)S(0.011)QPVLITVQR;FAQSAPGS(0.996)PLS(0.003)S(0.001)QPVLITVQR	243.99	5.695999999999999e-77	47581000.0	6477.2	3946.1000000000004	3944.6	5592.5	4706.9	3514.1	4691.700000000001	8508.2	8447.5	10513.2	True	False	6192.4700435802915	4598.125952768574	3116.682366148484	5102.214207916397	5325.939852209533	4193.150090726591	5743.93315530118	8208.961783506338	8054.777568823223	8609.157605009104	0.7192887304069447	0.5340970817043965	0.3620194343213198	0.5926496461102946	0.6186365840382243	0.4870569552922195	0.6671887563028421	0.9535151010280125	0.9356057744995487	1.0	13.07165636333733	-9.163181567530753	2.921571554158334	0.9672655826670595	0.5480182791391476	0.8116857548605565	0.08837967144739277	0.11579165783282996	1.8951478076081771	0.05158117279456392	0.026057423114164847	6.867812541261405e-10	9.163181567530753	-0.41924730352791195	
FAQSAPGSPLS(ph)S(ph)QPVLITVQR	ddPTM_K562_Methotrexat_30min_R1	1	FAQSAPGSPLSSQPVLITVQR	21	0	Q01167-2;Q01167	Q01167-2	FOXK2	Forkhead box protein K2	2	FAQS(0.11)APGS(0.056)PLS(0.898)S(0.935)QPVLIT(0.002)VQR	90.759	0.0013889000000000002	2632900.0	1042.0	589.38	582.65	981.96	650.65	777.3	828.55	957.82	1137.1	1358.3	True	False	996.1949276555705	686.7650272529185	460.35972738336295	895.8730913912533	736.2218795470765	927.5022240464923	1014.3734287837653	924.1329277024557	1084.236469193121	1112.2987078038907	0.8956181650363021	0.6174285939870048	0.4138813828996455	0.8054249142840905	0.6618922366642538	0.8338607404100483	0.9119613478528013	0.8308316113457084	0.9747709509919548	1.0	10.11932856049071	-8.437446824223054	1.2024682161599074	0.935297600380102	0.6528029265826242	0.47290957899602426	0.12481209056090073	0.4290878352998327	1.2698202767313498	0.07023084163021878	0.05402759811538666	3.6521884255196372e-09	8.437446824223054	-0.28249467379747784	
FAS(ph)DDEHDEHDENGATGPVK	ddPTM_K562_Methotrexat_30min_R1	3	FASDDEHDEHDENGATGPVK	20	0	P05455	P05455	SSB	Lupus La protein	1	FAS(1)DDEHDEHDENGATGPVK;FAS(0.996)DDEHDEHDENGAT(0.004)GPVK;FAS(0.999)DDEHDEHDENGAT(0.001)GPVK	60.765	0.020225	145481000.0	11679.4	8258.8	17929.7	11642.599999999999	8206.5	8333.5	7003.6	9944.7	11480.8	13692.1	True	False	11165.98756051869	9623.426324402593	14166.50099384791	10621.911334302627	9285.798592950252	9943.830932833453	8574.335581232248	9594.939264290388	10947.060113897094	11212.328010838288	0.995867009039086	0.8582897606188654	1.2634754334830376	0.9473421865677726	0.8281775723983659	0.8868658607937036	0.7647239335973716	0.855749069686111	0.9763414077179355	1.0	13.452798234944712	-7.5198133956535065	24.689485035399226	0.8735650732632915	1.0351669909181782	0.27013012331330744	0.11220708248405722	130.74274883987297	1053058.0145026816	0.03271385617198709	0.043086723078893246	3.0212495890741053e-08	7.5198133956535065	0.16160191765488674	
FAS(ph)DDEHDEHDENGATGPVKR	ddPTM_K562_Methotrexat_30min_R1	4	FASDDEHDEHDENGATGPVKR	21	1	P05455	P05455	SSB	Lupus La protein	1	FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR	123.32	1.2731e-06	1691579000.0	13694.300000000001	9085.5	20051.0	15179.4	9176.1	8175.6	7743.99	11057.7	11959.0	15134.3	True	False	13092.314969091827	10586.724447905233	15842.569113127623	13848.645569538869	10382.917988030313	9755.418992556928	9480.776885845386	10668.794423435982	11403.028700273093	12393.33161563455	1.0563999556483656	0.8542274810551967	1.2783139840413662	1.1174271776984002	0.8377826326322099	0.7871506464210303	0.7649901721249118	0.8608495886591936	0.9200938903214564	1.0	13.597276449130145	-7.76662242835712	24.944024981219343	0.8462795263654763	1.0751176735095522	0.45345259663488535	0.11475578357275114	112.18104175532598	539883.7556087346	0.03635574243911582	0.04245523682650187	1.7115026331720598e-08	7.76662242835712	0.2288381471440759	
FAS(ph)ENDLPEWK	ddPTM_K562_Methotrexat_30min_R1	2	FASENDLPEWK	11	0	C9JJ34;P43487-2;P43487;C9JIC6;C9JXG8;C9JDM3;C9JGV6;F6WQW2	C9JJ34	RANBP1	Ran-specific GTPase-activating protein	1	FAS(1)ENDLPEWK;FAS(1)ENDLPEWK	162.48	3.4588e-05	29250000.0	8822.400000000001	6802.6	14354.3	9670.5	6797.6	6607.6	6186.2	9198.3	8672.900000000001	11271.3	True	False	8434.57785964348	7926.614025570436	11341.52859311595	8822.702279419851	7691.603547850927	7884.425184111155	7573.612823779046	8874.790575353925	8269.698772020949	9229.958348869906	0.9138262103507963	0.8587919604795347	1.2287735398615942	0.9558767164426133	0.833330255362709	0.8542211011251752	0.820546803952408	0.9615201109158346	0.8959627399655028	1.0	13.17210842223905	-7.529265491763622	24.052595238171218	0.887374420532987	1.0039680921202032	0.1767032576959141	0.10318956627533593	162.79485542310482	613082.3008070813	0.03112604229190932	0.040305287059015205	2.9562047347339153e-08	7.529265491763622	0.11659367158721623	
FASAENIPDLPYDYSSSLES(ph)VADETSPEREGR	ddPTM_K562_Methotrexat_30min_R1	3	FASAENIPDLPYDYSSSLESVADETSPEREGR	32	1	P50747	P50747	HLCS	Biotin--protein ligase;Biotin--[methylmalonyl-CoA-carboxytransferase] ligase;Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase;Biotin--[methylcrotonoyl-CoA-carboxylase] ligase;Biotin--[acetyl-CoA-carboxylase] ligase	1	FASAENIPDLPY(0.021)DY(0.083)S(0.091)S(0.091)S(0.091)LES(0.499)VADET(0.063)S(0.063)PEREGR;FAS(0.016)AENIPDLPY(0.021)DY(0.055)S(0.059)S(0.161)S(0.161)LES(0.291)VADET(0.072)S(0.165)PEREGR;FASAENIPDLPY(0.06)DY(0.02)S(0.05)S(0.152)S(0.152)LES(0.476)VADET(0.067)S(0.023)PEREGR	67.752	5.0588000000000004e-05	51359200.0	3712.95	2819.9700000000003	4165.82	3889.81	3597.38	3117.46	3417.13	3933.6	3711.69	4211.73	True	False	3549.733163760798	3285.922111205693	3291.471311298653	3548.7963966196266	4070.4985246216274	3719.865024284031	4183.508387785729	3795.253058414296	3539.13434204504	3448.9448845018605	1.0292229312540884	0.952732566406403	0.9543415222693673	1.028951321479928	1.1802155908355547	1.0785516002298483	1.2129820939107188	1.1004098892587706	1.0261498691812831	1.0	11.751939358809889	-7.550996879842387	6.783288167795074	1.1093282153488182	0.9784161877144002	0.4276680351153106	0.06285395627811455	0.14709884544601448	23.191975596368113	0.01825195471086397	0.02397942582284118	2.8119210323717152e-08	7.550996879842387	-0.130912027634418	
FASAENIPDLPYDYSSSLESVADETS(ph)PEREGR	ddPTM_K562_Methotrexat_30min_R1	1	FASAENIPDLPYDYSSSLESVADETSPEREGR	32	1	P50747	P50747	HLCS	Biotin--protein ligase;Biotin--[methylmalonyl-CoA-carboxytransferase] ligase;Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase;Biotin--[methylcrotonoyl-CoA-carboxylase] ligase;Biotin--[acetyl-CoA-carboxylase] ligase	1	FASAENIPDLPY(0.007)DY(0.006)S(0.007)S(0.025)S(0.067)LES(0.118)VADET(0.22)S(0.55)PEREGR	65.73	7.224e-05	39186000.0	2941.6	3241.7	3817.0	3417.2	2805.4	2878.5	2808.1	3507.0	3667.1	4305.7	True	False	2812.290786172387	3777.335825521371	3015.863862391311	3117.619381545268	3174.3592728523295	3434.7293862316083	3437.8879070275675	3383.656822213475	3496.617321412448	3525.896006913945	0.7976102473407479	1.0713123183764857	0.8553467987931268	0.884206277051823	0.900298609666228	0.9741437012028807	0.9750395077694288	0.9596587124459848	0.9916961006665868	1.0	11.783774208973608	-8.267816961945812	20.568800516452622	0.9772695746105532	0.9076215583967671	0.25909485805338783	0.06578859267926856	72.12631591700384	232615.13503375952	0.022007505462732526	0.019979996370028917	5.397380529601962e-09	8.267816961945812	-0.06964801621378613	
FASENDLPEWKER	ddPTM_K562_Methotrexat_30min_R1	1	FASENDLPEWKER	13	1	C9JJ34;P43487-2;P43487;C9JIC6;C9JXG8;C9JDM3;C9JGV6;F6WQW2	C9JJ34	RANBP1	Ran-specific GTPase-activating protein	0		140.31	3.1902e-05	21349000.0	1770.5	1343.5	2612.8	2181.6	1042.6	1274.1	1389.7	1738.4	1444.5	2390.6	False	True	1692.6709399368413	1565.490539404621	2064.4089860246318	1990.3425151525084	1179.7201746188919	1520.3017929469145	1701.3756007251206	1677.2594866655004	1377.3455102888597	1957.6391746123697	0.8646490946279748	0.7996828831925077	1.054540087262712	1.0167054996468459	0.6026239104315467	0.7765995964235585	0.8690956039240523	0.8567766258547687	0.7035747588988591	1.0	10.934899161468644	-7.722697273709455	24.99998344309221	0.7964234011037199	0.9329253469191765	0.2290816225392478	0.11881245125299734	249.51777137733697	161010.888897004	0.03572661423483415	0.046122052472948184	1.893663142359975e-08	7.722697273709455	0.1365019458154566	
FCDS(ph)PTSDLEMR	ddPTM_K562_Methotrexat_30min_R1	1	FCDSPTSDLEMR	12	0	O15014	O15014	ZNF609	Zinc finger protein 609	1	FCDS(0.353)PT(0.353)S(0.294)DLEMR	88.021	0.021463999999999997	0.0	715.19	689.6	611.05	685.53	697.3	604.26	652.32	581.23	538.33	683.46	True	False	683.7511039443258	803.544678804188	482.7989554923263	625.4306492539874	789.0071722249697	721.0246930430123	798.6193652335115	560.7878114556996	513.3031558004865	559.6787711371917	1.221684900706589	1.4357247768599366	0.8626358196708873	1.1174814581285561	1.4097500439793593	1.2882830834873147	1.426924526029145	1.0019815658118576	0.9171388701371034	1.0	9.128455216486433	-9.410066101149846	6.939154235898632	0.9590987867274152	1.2457558131339055	0.38228617989097713	0.16279332200352237	0.28004483385103246	15.128286328448416	0.0955393729394399	0.04521628357373786	3.8898593545895626e-10	9.410066101149846	0.28665702640649027	
FDGSENRPFS(ph)PSPLNNISSTVTVK	ddPTM_K562_Methotrexat_30min_R1	1	FDGSENRPFSPSPLNNISSTVTVK	24	1	Q5UIP0-2;Q5UIP0	Q5UIP0-2	RIF1	Telomere-associated protein RIF1	1	FDGS(0.019)ENRPFS(0.683)PS(0.247)PLNNIS(0.034)S(0.014)T(0.002)VT(0.001)VK	55.718	0.010739	9699400.0	1926.1	1121.2	2401.9	1715.4	1080.2	966.55	958.17	1964.9	1933.7	2573.3	True	False	1841.4309502470198	1306.4592428585493	1897.7740139056032	1565.0135453303144	1222.2652336690267	1153.3221081334582	1173.0640133458933	1895.793353284077	1843.8027090658143	2107.250434213172	0.8738548206466942	0.6199829036202663	0.9005925366503553	0.7426803762480543	0.5800284644978181	0.5473113633805458	0.5566799248442934	0.8996526101046689	0.874980343641155	1.0	11.04114606475341	-9.36479267663943	7.096251191785895	0.9198521319187493	0.6869638180001356	0.44763485460401076	0.12028128943202764	0.27445370673943537	16.433720113317978	0.07120152357269408	0.03380922957705219	4.3172512444390903e-10	9.36479267663943	-0.23288831391861364	
FDIYDPFHPTDEAYS(ph)PPPAPEQK	ddPTM_K562_Methotrexat_30min_R1	3	FDIYDPFHPTDEAYSPPPAPEQK	23	0	Q9H7N4	Q9H7N4	SCAF1	Splicing factor, arginine/serine-rich 19	1	FDIYDPFHPTDEAY(0.295)S(0.705)PPPAPEQK;FDIYDPFHPT(0.005)DEAY(0.447)S(0.548)PPPAPEQK;FDIYDPFHPTDEAY(0.107)S(0.893)PPPAPEQK	132.81	5.4269e-10	201929000.0	17718.5	10882.8	22478.4	19072.6	11895.6	11063.5	10881.1	16587.8	16151.3	23141.9	True	False	16939.615955532852	12680.997724028748	17760.49102551135	17400.53477012181	13460.079905233542	13201.364795752443	13321.46366053832	16004.397671945466	15400.429588320154	18950.67766040407	0.8938791667026678	0.6691580085563209	0.9371955633344172	0.9182011895267913	0.7102690545656478	0.6966170303944138	0.7029544747295479	0.8445290431690143	0.8126585161911187	1.0	14.20996181843785	-10.432240209251109	1.5987799122683393	0.9997879706707871	0.7914546548719125	0.29363956782527345	0.09418621035502728	2.931002183769331	9.277275651339043	0.09456939859087807	0.027066485435975528	3.696236835441942e-11	10.432240209251109	-0.2083333157988746	
FDLSHGS(ph)PQMVRR	ddPTM_K562_Methotrexat_30min_R1	1	FDLSHGSPQMVRR	13	1	A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87	A0A2R8Y4X0	KSR1	Kinase suppressor of Ras 1	1	FDLS(0.015)HGS(0.985)PQMVRR	53.924	0.032346	23945000.0	3677.4	3455.1	5201.2	5084.5	3565.7	3449.0	3957.7	4043.5	3761.6	5193.8	True	False	3515.745899194429	4025.9965483415767	4109.539198603531	4638.749779195517	4034.6520493368325	4115.470437072369	4845.314970849687	3901.287813122383	3586.7240370388204	4253.15249104899	0.8266211725522477	0.946591159572699	0.9662336836622478	1.090661524353533	0.9486262384967376	0.9676282347584808	1.1392290732690487	0.9172696773353114	0.8433095320676351	1.0	12.054316866438894	-6.259978163568991	2.0702250599663357	0.9885577392751767	0.7807684781264541	0.2655577021103188	0.07864824084293782	0.9985467188103944	4.691021280360256	0.02167071524699101	0.39067270424070544	5.495685055996007e-07	6.259978163568991	-0.20778926114872254	
FDS(ph)PESHVGVAWR	ddPTM_K562_Methotrexat_30min_R1	1	FDSPESHVGVAWR	13	0	P0DN79;P35520;P35520-2	P0DN79	CBS	Cystathionine beta-synthase	1	FDS(1)PESHVGVAWR	86.539	0.017008000000000002	8792200.0	1043.6	977.84	1417.4	1254.3	1122.9	937.27	1018.6	1450.3	1355.1	1701.0	True	False	997.724593571357	1139.411439561902	1119.9071099170662	1144.3374664263808	1270.5810321115987	1118.384162526767	1247.0469791311857	1399.2921269621347	1292.101696775656	1392.932416972993	0.7162763831281425	0.8179947753947588	0.8039924236602641	0.8215312189468328	0.9121627270852966	0.802899084621168	0.8952673969934352	1.0045656988893705	0.9276126257320838	1.0	10.44390954686314	-7.298976722877531	0.23627473209631006	1.0267378015674054	0.6168470623515734	0.759621156919102	0.043380338862961845	3.302509147682018	0.2514653321061919	0.08116491817030669	0.39718254522056684	5.0236951457861307e-08	7.298976722877531	-0.40989073921583197	
FDSPDLLLEAGDPAT(ph)SPCR	ddPTM_K562_Methotrexat_30min_R1	1	FDSPDLLLEAGDPATSPCR	19	0	A0A096LNM2;Q969U6-2;Q969U6	A0A096LNM2	FBXW5	F-box/WD repeat-containing protein 5	1	FDSPDLLLEAGDPAT(0.5)S(0.5)PCR	97.579	0.0037961999999999996	0.0	396.96	331.33	544.4	296.88	352.8	161.44	396.44	398.45	402.33	382.83	True	False	379.5101137064832	386.0766508529462	430.1378796661852	270.85299133593554	399.1993838533904	192.63599517569244	485.3517616402581	384.4362876563899	383.62576611596893	313.49577730145296	1.2105748822943532	1.23152105644377	1.3720691339729623	0.8639765220042733	1.2733804177193944	0.6144771608532911	1.5481923419132722	1.2262885674747752	1.2237031369870095	1.0	8.292302200242926	-13.445240627418345	1.7212760607904165	9.045276716459187e-05	1.1712487399449423	0.04269583285138745	0.24662062429793874	3024180.4997433103	257840.74970753342	11721890.82149164	0.06363265851520956	3.5872312360729554e-14	13.445240627418345	1.1711582871777777	
FEEESKEPVADEEEEDS(ph)DDDVEPITEFR	ddPTM_K562_Methotrexat_30min_R1	6	FEEESKEPVADEEEEDSDDDVEPITEFR	28	1	P54105;E9PJF4	P54105	CLNS1A	Methylosome subunit pICln	1	FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR	154.02	3.4191999999999996e-35	2224660000.0	22723.300000000003	16155.7	33053.7	24140.4	16141.8	15059.5	14362.8	20903.600000000002	19825.699999999997	27196.899999999998	True	False	21724.41094011117	18825.154825053403	26116.180075536722	22024.048612388895	18264.72963232612	17969.53524125582	17584.02351449575	20168.40853972672	18904.007534325967	22271.277866650686	0.9754451931400667	0.8452660389659296	1.1726394970197667	0.9888991886436838	0.8201024540076336	0.8068479657453175	0.7895381495296373	0.9055793143296537	0.8488065950913883	1.0	14.442896718051857	-7.750842339200554	22.438352422342316	0.8507294543920768	0.9974755724658934	0.32828351979750336	0.09290366655009442	67.830781547529	143622.88734882156	0.02765425117625446	0.03522685126745413	1.774833677219534e-08	7.750842339200554	0.14674611807381654	
FEELCSDLFR	ddPTM_K562_Methotrexat_30min_R1	2	FEELCSDLFR	10	0	A0A0G2JIW1;P0DMV8-2;P0DMV9;P0DMV8;V9GZ37;P17066;P48741	A0A0G2JIW1;P17066	HSPA1A;HSPA1B;HSPA6;HSPA7	Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7	0	;	157.99	2.2618000000000003e-07	25386000.0	3432.4	3099.2	3724.5	3392.5	3094.8	2702.69	2980.2	3681.1	3531.2	3575.3	False	True	3281.5158058397124	3611.2901226072213	2942.778348304016	3095.084792196043	3501.8204454350143	3224.9465919313175	3648.585712945962	3551.633626532656	3367.035282749758	2927.778524634653	1.12082105194388	1.2334574122398352	1.0051232781247466	1.0571444411363964	1.1960673992142197	1.1014995037350876	1.2461959407948235	1.2130813846227837	1.1500307330008572	1.0	11.515590707991606	-7.772082542788078	24.994084062565253	1.1640700820565963	1.1063013684282177	0.057472751372004804	0.083806125141487	526.413348083928	1236210.4841927728	0.02602731897221575	0.029810705112894704	1.690119673938598e-08	7.772082542788078	-0.057768713628378654	
FEELNADLFR	ddPTM_K562_Methotrexat_30min_R1	3	FEELNADLFR	10	0	E9PKE3;P11142-2;P11142;E9PN89;E9PNE6;A8K7Q2;P54652	E9PKE3	HSPA8;HSPA2	Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2	0	;;	178.84	6.1072e-05	55743000.0	8586.5	7099.8	8812.7	8578.3	7401.499999999999	6318.9	7150.799999999999	8842.8	8690.9	9195.0	False	True	8209.047741184795	8272.921274034183	6963.0347026711825	7826.253757669953	8374.926982967318	7539.937995017853	8754.548928304812	8531.793711853246	8286.861955949777	7529.696398628262	1.0902229394906673	1.0987058223942894	0.9247430884384247	1.0393850353774845	1.1122529434909272	1.0013601606024192	1.1626695772089417	1.1330860183695513	1.1005572492218216	1.0	12.878375980499055	-8.75637087362207	24.999930757901645	1.1101687116141985	1.0443225887749532	0.13889820120721064	0.0643112749527259	214.22773667064735	1056662.0294848562	0.025292623063633404	0.018969265295941937	1.7523833832250793e-09	8.75637087362207	-0.06584612283924529	
FEKAHNLNVHMS(ph)MVHPLT(ph)QT(ph)QDK	ddPTM_K562_Methotrexat_30min_R1	1	FEKAHNLNVHMSMVHPLTQTQDK	23	1	Q8N554-2;Q8N554	Q8N554-2	ZNF276	Zinc finger protein 276	3	FEKAHNLNVHMS(1)MVHPLT(1)QT(1)QDK	43.696000000000005	0.028326999999999998	0.0	193.02	74.332	299.79	198.28	0.0	0.0	174.19	282.07	0.0	176.32	True	False	184.53507191562218	86.6140995720315	236.86817587275112	180.89710024955977	0.0	0.0	213.25654162071578	272.14943822120205	0.0	144.38673942426706	1.278061078541174	0.5998757220877743	1.6405119806517405	1.2528650551350868	0.0	0.0	1.4769814906206946	1.8848644917558262	0.0	1.0	7.173794439996188	-12.792040140009467	2.8687303132656883	1.020440339906636	0.9192523004329054	0.0013272716882045676	0.681234267001203	5656550431.771919	4314883089.510679	806054904.9803389	0.17598525111164137	1.614209355360812e-13	12.792040140009467	-0.10118803947373056	
FELLPTPPLS(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	1	FELLPTPPLSPSR	13	0	H0YBG3;A0A0B4J1R1;H0YBT0;A0A087WUS5;P01106;P01106-2;P04198	H0YBG3	MYC;MYCN	Myc proto-oncogene protein;N-myc proto-oncogene protein	1	FELLPT(0.01)PPLS(0.76)PS(0.23)R	98.676	0.01275	0.0	776.17	731.28	913.83	1098.5	772.3	774.44	598.73	835.41	672.45	1007.7	True	False	742.0504961597169	852.1115903653235	722.0295712258453	1002.1962105312756	873.8709868196528	924.089569523434	733.0104435649073	806.0281567851048	641.1879462746583	825.195765187352	0.8992417647601987	1.0326175027956677	0.8749797341263816	1.2144950965710997	1.058986271725776	1.119842840339382	0.8882867247852211	0.9767720470573484	0.7770131323069543	1.0	9.688592607268047	-8.78074365533133	24.975769681377418	0.9085822687717162	1.0355258381284553	0.23964002558915243	0.10713357179527605	362.42339445639794	468896.91220193746	0.04485041259037276	0.030289785742076372	1.656747579145821e-09	8.78074365533133	0.12694356935673912	
FELLPTPPLS(ph)PSRR	ddPTM_K562_Methotrexat_30min_R1	1	FELLPTPPLSPSRR	14	1	H0YBG3;A0A0B4J1R1;H0YBT0;A0A087WUS5;P01106;P01106-2	H0YBG3	MYC	Myc proto-oncogene protein	1	FELLPTPPLS(0.971)PS(0.029)RR	94.20299999999999	0.0061589	5944200.0	2279.9	2050.2	2464.7	2629.5	2140.7	2155.8	1724.0	2313.7	2429.6	2832.0	True	False	2179.6783258751775	2388.960702558507	1947.3931521183804	2398.975817562122	2422.2395720378486	2572.377839443496	2110.650885550917	2232.3258595823554	2316.6484263051684	2319.0973573589163	0.9398821998389429	1.0301252316889162	0.839720310119344	1.0344437718191246	1.0444751551079317	1.1092151139239046	0.9101174122136093	0.9625839348653392	0.9989440154179052	1.0	11.179347671282752														
FEPES(ph)PGFESR	ddPTM_K562_Methotrexat_30min_R1	4	FEPESPGFESR	11	0	H3BS42;Q9H5H4	H3BS42	ZNF768	Zinc finger protein 768	1	FEPES(0.976)PGFES(0.024)R;FEPES(1)PGFESR;FEPES(1)PGFESR;FEPES(0.999)PGFES(0.001)R	206.74	9.9487e-12	309099000.0	13715.0	11413.3	15098.9	14115.9	11487.2	11146.0	10151.9	13891.0	13163.099999999999	13869.800000000001	True	False	13112.10502187731	13299.15383207053	11929.847228677007	12878.380963348593	12997.96814682729	13299.806753148341	12428.721998273977	13402.44565650625	12551.150354090201	11357.844818890082	1.1544536160653989	1.1709223047273645	1.0503618792920628	1.1338754111105298	1.1444044494435597	1.1709797910804731	1.0942852448206406	1.1800166202496127	1.10506443381014	1.0	13.471401485159927	-10.022865662562442	23.302819620561728	0.9999999982306871	1.1358690075977975	0.5510377534475195	0.03724702222133445	599.5865469327124	611049.9828196926	0.03554346470918461	0.009177283125452781	9.487118766841835e-11	10.022865662562442	0.13586900936711044	
FES(ph)PEVAER	ddPTM_K562_Methotrexat_30min_R1	1	FESPEVAER	9	0	A0A087X0X3;P52272-2;P52272	A0A087X0X3	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	1	FES(1)PEVAER	86.344	0.019115	6991900.0	1447.6	1445.7	1654.1	1438.7	1626.2	1304.6	1072.5	1450.2	1719.6	1651.1	True	False	1383.9652373072977	1684.577352301646	1306.927014613954	1312.5714047258502	1840.0738039183207	1556.695486287217	1313.0354261910431	1399.1956440188148	1639.6561713345266	1352.0697905138807	1.0235900890746878	1.2459248510103826	0.9666120963454341	0.9707867256075455	1.3609310827209329	1.1513425543629403	0.9711299190347255	1.0348546013198203	1.2127008404731408	1.0	10.400953906570379	-12.149871955005045	3.5247153328396585	0.9999015659018028	1.1033882379993618	0.05565153517655341	0.12874067186995006	32568140.809138227	54636421.661518686	38564.446107699056	0.03226451203090662	7.081545419960688e-13	12.149871955005045	0.10348667209755902	
FESPATGILS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	3	FESPATGILSPR	12	0	P49792	P49792	RANBP2	E3 SUMO-protein ligase RanBP2	1	FESPATGILS(1)PR;FESPATGILS(1)PR;FESPATGILS(1)PR	156.0	2.3484000000000003e-07	185176000.0	3008.94	2758.38	3186.8	2504.61	2866.91	2546.4300000000003	2303.49	3460.74	4130.299999999999	4100.8	True	False	2876.670600403026	3214.155410556697	2517.934230198748	2285.034729957887	3243.958915995247	3038.491558444241	2820.106269349002	3339.023812633895	3938.2832545144206	3358.1053824355386	0.8566349988446934	0.9571335751904133	0.7498079849931815	0.6804535503589874	0.9660086705326966	0.9048231703319892	0.8397908785410597	0.9943177572980737	1.172769405961315	1.0	11.71343178960397	-9.428280729489469	3.499652689368776	1.0876743254415355	0.8509539326071833	0.5292310870155275	0.09095389733032683	0.19829765418459327	4.474973313146255	0.06233255458777577	0.025608356061945493	3.7300896553546956e-10	9.428280729489469	-0.2367203928343522	
FFDS(ph)EDEDFEILSL	ddPTM_K562_Methotrexat_30min_R1	4	FFDSEDEDFEILSL	14	0	Q9Y4P1-4;Q9Y4P1	Q9Y4P1-4	ATG4B	Cysteine protease ATG4B	1	FFDS(1)EDEDFEILSL;FFDS(1)EDEDFEILSL;FFDS(1)EDEDFEILSL;FFDS(1)EDEDFEILSL	272.1	2.5141999999999992e-124	283862900.0	13045.74	11543.14	15195.93	13535.65	11242.710000000001	11056.439999999999	11071.11	14737.06	14706.93	17544.36	True	False	12472.264890128017	13450.447685167883	12006.51195767041	12349.000579952359	12721.323426423907	13192.940550671037	13554.08823986752	14218.749246754878	14023.20803435967	14366.906395675678	0.8681246015413636	0.9362104349212129	0.8357061448722372	0.8595448623281423	0.8854601732668713	0.9182868035280027	0.9434242742715433	0.989687609507542	0.9760770793760124	1.0	13.810461821435029	-8.793846382032955	1.3373871430503201	0.9907622303300706	0.8761387681522425	0.7946853452778257	0.02475363408508739	0.20267332810221234	0.7278052159866607	0.016320393070299914	0.009205874016403815	1.6075097583070414e-09	8.793846382032955	-0.11462346217782815	
FFEHFIEGGR	ddPTM_K562_Methotrexat_30min_R1	1	FFEHFIEGGR	10	0	F5H3F0;F5GYN4;J3KR44;F5H6Q1;F5GYJ8;Q96FW1;Q96FW1-2	F5H3F0	OTUB1	Ubiquitin thioesterase OTUB1	0		90.05	0.021339	6579400.0	5096.5	4064.2	5230.9	5176.9	4328.7	3877.0	4149.2	5591.8	5214.0	5725.8	False	True	4872.4639623767935	4735.739970411805	4133.005574478047	4723.049214655766	4897.999923146744	4626.175379683845	5079.763720607804	5395.133224537585	4971.602278052003	4688.802135863593	1.0391703085759179	1.0100106238625841	0.8814629951785801	1.0073040145008945	1.044616467323934	0.9866433356825338	1.0833819754844918	1.1506421188626033	1.0603139424513854	1.0	12.19500368429422	-8.765111463378505	23.84546412482723	1.0861380617263845	0.9932280532092115	0.3214915465774244	0.054791472855747606	56.90160344039624	369491.71108960273	0.022816815239752295	0.016077875109054476	1.7174675358220744e-09	8.765111463378505	-0.09291000851717302	
FFQGS(ph)QEFLASASASAER	ddPTM_K562_Methotrexat_30min_R1	4	FFQGSQEFLASASASAER	18	0	Q7Z2W4-2;Q7Z2W4;C9J6P4;Q7Z2W4-3	Q7Z2W4-2	ZC3HAV1	Zinc finger CCCH-type antiviral protein 1	1	FFQGS(0.989)QEFLAS(0.005)AS(0.003)AS(0.003)AER;FFQGS(1)QEFLASASASAER;FFQGS(0.88)QEFLAS(0.087)AS(0.014)AS(0.019)AER;FFQGS(1)QEFLASASASAER	153.06	4.425500000000001e-15	35158600.0	3299.5800000000004	2680.4399999999996	3527.0299999999997	3120.58	2522.2999999999997	2435.09	2695.0299999999997	3526.2200000000003	2989.1099999999997	3777.7	True	False	3154.5344140055377	3123.3371503101785	2786.7546027167978	2847.0035964130075	2854.026660695596	2905.6366792144267	3299.4590812565452	3402.200843919479	2850.1469285285807	3093.5219233385537	1.0197226630937009	1.009637955608683	0.9008355756888607	0.9203114336880142	0.9225816824389942	0.9392649385457208	1.0665704536839817	1.0997823607623884	0.921327535139198	1.0	11.595034542819144	-8.749802522524138	24.982058633624042	1.030235285203147	0.9495649610034317	0.26555479327305875	0.05614934996819365	272.7788343645984	585604.2288099831	0.022400478517070204	0.01720057172025664	1.7790881930100752e-09	8.749802522524138	-0.08067032419971543	
FFTFDS(ph)PAELPSR	ddPTM_K562_Methotrexat_30min_R1	1	FFTFDSPAELPSR	13	0	Q9NXH8	Q9NXH8	TOR4A	Torsin-4A	1	FFT(0.012)FDS(0.983)PAELPS(0.005)R	89.74700000000001	0.017728	3715900.0	913.48	514.97	765.58	1068.0	782.51	720.96	704.88	676.98	930.21	1003.6	True	False	873.3245129700678	600.0600395066599	604.895220269725	974.3700981769715	885.4237807798092	860.2753164139444	862.9672831827893	653.1702296840833	886.9647401355488	821.8383149171647	1.0626476000429508	0.7301436652623595	0.736027037545328	1.1855982867812398	1.0773697997629297	1.046769541890553	1.0500450849261878	0.7947673135073023	1.0792448149913143	1.0	9.682710781721566	-7.250065233911472	24.992081019120032	1.0279306809199942	0.8316598599234583	0.3225793902716714	0.12598897184545915	890.3818623226474	1956407.1828668106	0.03499574733411883	0.05995118527675466	5.6225686413725854e-08	7.250065233911472	-0.19627082099653592	
FFTSS(ph)TSLTLK	ddPTM_K562_Methotrexat_30min_R1	2	FFTSSTSLTLK	11	0	Q99567;I3L245;J3KMX1	Q99567	NUP88	Nuclear pore complex protein Nup88	1	FFTS(0.017)S(0.702)T(0.215)S(0.066)LTLK;FFT(0.033)S(0.018)S(0.947)T(0.002)S(0.001)LTLK	190.36	2.3562e-05	17791400.0	6580.2	4656.299999999999	7591.4	6823.8	5117.9	4898.5	4584.4	6707.2	6499.4	7757.4	True	False	6290.942286909008	5425.674431432631	5998.068882619175	6225.568048632973	5790.993556188398	5845.065797622209	5612.568398909292	6471.303974322852	6197.2443126143435	6352.459689257082	0.9903159712367622	0.8541060780925886	0.9442120337674504	0.9800248019143355	0.9116143729305038	0.9201263893900896	0.8835268027597166	1.0187083886996957	0.9755660981359348	1.0	12.63309960007359	-9.271865433471044	24.97258390571924	0.9978529360288015	0.9254562697932627	0.4105825159603985	0.03942269092005624	714.314215820825	1710921.5272329005	0.020797242758806643	0.010167674083752142	5.347300202998298e-10	9.271865433471044	-0.07239666623553886	
FFTT(ph)PSK	ddPTM_K562_Methotrexat_30min_R1	1	FFTTPSK	7	0	O76021;O76021-2	O76021	RSL1D1	Ribosomal L1 domain-containing protein 1	1	FFT(0.042)T(0.956)PS(0.003)K	120.31	0.0090357	99792000.0	11492.0	8557.8	20346.0	11210.0	8719.0	7867.7	7609.6	8966.8	9111.5	10748.0	True	False	10986.82544013227	9971.830992271574	16075.652644541164	10227.236704647798	9865.701326013917	9388.021675196946	9316.24650735977	8651.43256156938	8687.908353753512	8801.433049750578	1.2482996096236423	1.1329781111672677	1.8264812734099851	1.1619967619861205	1.1209198854604137	1.0666469451202598	1.0584920040519745	0.982957265330167	0.987101566829474	1.0	13.10352272721292	-7.510141604557886	24.206964741924054	1.0472438296210276	1.3953944360765052	0.4782143866204571	0.17095264664625495	359.4637845004039	683161.8846562981	0.049784788698185097	0.0699248070208599	3.0892879857158864e-08	7.510141604557886	0.3481506064554776	
FGDFLQHS(ph)PSILQSK	ddPTM_K562_Methotrexat_30min_R1	1	FGDFLQHSPSILQSK	15	0	Q96Q89-5;Q96Q89-3;Q96Q89;Q96Q89-2	Q96Q89-5	KIF20B	Kinesin-like protein KIF20B	1	FGDFLQHS(0.976)PS(0.024)ILQSK	71.842	0.031320999999999995	12791000.0	3178.6	2634.5	5207.4	3994.7	3061.9	3238.5	3032.6	3568.8	3768.5	5082.6	True	False	3038.8725499481748	3069.806346156663	4114.437903331543	3644.4908531718575	3464.5935187661476	3864.2942912319104	3712.7377468223335	3443.283281184902	3593.303257544876	4162.091888599023	0.730131056998617	0.7375633283267017	0.9885504725645254	0.8756392099739556	0.8324163933661598	0.9284500185632969	0.8920364677657455	0.8272963147730804	0.8633406838969133	1.0	12.023093101192023	-6.734134444573955	23.737115791009362	0.8921080815499945	0.733846651705672	0.5857965380502584	0.05581452758261445	87.04509580690959	75668.95279028473	0.013909137637925005	0.03677328927617264	1.8444443460217859e-07	6.734134444573955	-0.15826142984432257	
FGEYNSNMS(ph)PEEK	ddPTM_K562_Methotrexat_30min_R1	1	FGEYNSNMSPEEK	13	0	E9PFK5;P78316-2;P78316	E9PFK5	NOP14	Nucleolar protein 14	1	FGEYNS(0.006)NMS(0.994)PEEK	95.195	0.0078684	46636000.0	3723.1	2399.7	5267.2	3956.9	2369.0	1980.1	2169.6	2750.5	3070.3	4441.2	True	False	3559.4369819140634	2796.20963707426	4161.6867005469	3610.0047204835737	2680.5650236640636	2362.726301086401	2656.1880285912234	2653.7633560017607	2927.5624231498	3636.8556438920996	0.9787127481652849	0.7688536227084903	1.144309015271537	0.9926169949985173	0.7370556563513666	0.6496618322078498	0.7303528896045534	0.729686194847632	0.8049707521568752	1.0	11.82847594733377	-7.762628491012575	24.99926351160849	0.7532441228541497	0.969045722194745	0.3772863372513854	0.12127556322130348	30.945893630421224	650595.8515264352	0.03642647442566963	0.04365052212020775	1.727314858952891e-08	7.762628491012575	0.2158015993405954	
FGMGS(ph)AQACPCQVPR	ddPTM_K562_Methotrexat_30min_R1	2	FGMGSAQACPCQVPR	15	0	Q9BXH1-2;Q96PG8-1;Q96PG8	Q9BXH1-2	BBC3	Bcl-2-binding component 3	1	FGMGS(1)AQACPCQVPR;FGMGS(1)AQACPCQVPR	98.531	0.0030497	135635000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
FGQAATMEGIGAIGGT(ph)PPAFNR	ddPTM_K562_Methotrexat_30min_R1	3	FGQAATMEGIGAIGGTPPAFNR	22	0	Q15233-2;Q15233	Q15233-2	NONO	Non-POU domain-containing octamer-binding protein	1	FGQAAT(0.002)MEGIGAIGGT(0.998)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAAT(0.116)MEGIGAIGGT(0.884)PPAFNR	123.61	1.6801e-05	304863000.0	5148.2	4131.599999999999	4969.4	5450.0	4634.9	3762.6099999999997	3837.7	5458.700000000001	5546.1	6247.599999999999	True	False	4921.891292280625	4814.27667480769	3926.3908508691065	4972.20696167087	5244.470590198636	4489.681131119995	4698.401916170969	5266.71442697939	5288.263021538978	5116.099099518207	0.962039866026858	0.9410053599745672	0.7674579351363351	0.9718746382647498	1.0250916739850715	0.8775594537531138	0.9183563149926918	1.029439485930866	1.033651404844168	1.0	12.320828494346607	-9.260701538088913	24.2288942337221	1.0236590919426316	0.9220440272320364	0.3245375818518298	0.06453174080484979	52.873596922675794	1736357.907658363	0.034037951153835164	0.018163275203547855	5.486538889663324e-10	9.260701538088913	-0.10161506471059523	
FGSTGST(ph)PPVS(ph)PTPSER	ddPTM_K562_Methotrexat_30min_R1	2	FGSTGSTPPVSPTPSER	17	0	E7ER32;A0A087X287;A0A087WU73;A0A494BZX7;W0Z7M9;B0QY83;A0A499FIJ6;Q969V6	E7ER32	MKL1;mkl1	MKL/myocardin-like protein 1	2	FGS(0.003)T(0.001)GS(0.027)T(0.969)PPVS(0.98)PT(0.016)PS(0.004)ER;FGS(0.001)T(0.004)GS(0.146)T(0.853)PPVS(0.993)PT(0.004)PSER	118.71	0.0057917	35207000.0	4322.4	3815.6	6239.4	5225.4	4305.0	4629.5	4698.9	5499.4	5018.2	5516.6	True	False	4132.392471495622	4446.063045889302	4929.835206445986	4767.297294956876	4871.182957734826	5524.085354719201	5752.747938581904	5305.982984910407	4784.904977315031	4517.490283053039	0.9147540365494361	0.9841887347424543	1.09127743449495	1.0552977419433451	1.0782940642968584	1.2228217458358048	1.2734389181007923	1.1745422020751939	1.0591954110593607	1.0	12.141305782574038	-6.617159598076711	0.8004967291558251	1.1541255258014884	0.8460143928336747	0.4460264492325442	0.07824809511654415	1.4556288123598005	1.0173617374122006	0.03302269221953064	0.3648840751732006	2.4145733442869725e-07	6.617159598076711	-0.3081111329678137	
FHALSSPQS(ph)PFPSTPTSR	ddPTM_K562_Methotrexat_30min_R1	2	FHALSSPQSPFPSTPTSR	18	0	F5GYF8;O43166-3;O43166-2;O43166	F5GYF8	SIPA1L1	Signal-induced proliferation-associated 1-like protein 1	1	FHALSSPQS(1)PFPSTPTSR;FHALSSPQS(1)PFPSTPTSR	127.1	1.0337e-09	10902000.0	3094.8999999999996	2758.8	3865.7	3517.0	2605.5	2463.2	2493.1000000000004	3060.8	3498.8999999999996	4074.4	True	False	2958.851901728624	3214.6448084179165	3054.3423979161853	3208.6700704947616	2948.168919019301	2939.178538879868	3052.2411384959323	2953.149929122045	3336.2369026996857	3336.4866782567724	0.8868166388947032	0.963481985217302	0.9154367130612971	0.961691257874648	0.8836147730581208	0.8809202080841253	0.9148069310112303	0.8851076638091026	0.9999251381524421	1.0	11.704114028209927	-9.773141642635169	24.947744344182407	0.9999626683413633	0.9131860137264949	0.6013099505462418	0.028791353215114557	169.5772535337786	361505.13424199057	0.027495774704260106	0.007339836081457766	1.6860030555569436e-10	9.773141642635169	-0.08677665461486839	
FHDFDHR	ddPTM_K562_Methotrexat_30min_R1	2	FHDFDHR	7	0	Q15424-2;Q15424;Q15424-4;Q15424-3;K7EII0;Q14151	Q15424-2;Q14151	SAFB;SAFB2	Scaffold attachment factor B1;Scaffold attachment factor B2	0	;	101.28	0.015059000000000001	17382800.0	2513.6	2047.8600000000001	2904.3	2620.3	2142.9300000000003	2163.5	2171.0	2528.2	2672.8	2510.3	False	True	2403.1051536996574	2386.2340573317056	2294.7271196078295	2390.5823672782	2424.762856125131	2581.565755467112	2657.902014229141	2439.2817730025995	2548.5421113880693	2055.6603446956533	1.1690185880661352	1.1608114460587091	1.1162968267248308	1.162926732252615	1.1795542305332178	1.2558328335361846	1.292967498783293	1.1866171273366382	1.2397680959134272	1.0	11.005386193404135	-7.924732099197141	3.4223641886938085	1.213188953570635	1.150244402310607	0.03869437989207025	0.07546103896479063	0.5011461339997436	11.793911447896393	0.023484961842790038	0.02666969927650865	1.189235598316516e-08	7.924732099197141	-0.06294455126002796	
FHDRPVTYLY(ph)NT(ph)LHY(ph)YEMHLR	ddPTM_K562_Methotrexat_30min_R1	1	FHDRPVTYLYNTLHYYEMHLR	21	1	Q5JWT2;Q9ULK4-4;Q9ULK4-5;Q9ULK4-3;Q9ULK4	Q5JWT2	MED23	Mediator of RNA polymerase II transcription subunit 23	3	FHDRPVT(0.008)Y(0.071)LY(0.912)NT(0.865)LHY(0.572)Y(0.572)EMHLR	52.611999999999995	0.014525	13172000.0	261.96	0.0	193.67	171.96	167.91	198.55	123.43	118.54	191.43	181.75	True	False	250.44455206204736	0.0	153.02131365714567	156.88453378512355	189.9931081145771	236.9169774661406	151.11231949161808	114.3708810108884	182.53046108314058	148.83331380649125	1.6827183757237851	0.0	1.0281388604711144	1.054095550066837	1.2765496061023047	1.5918276050358804	1.0153124702181255	0.7684494693143102	1.226408634027066	1.0	7.217553675119349	-6.984127629587176	24.99918927499933	1.1358579670522335	0.7595369023241232	0.06149115412623429	0.42892014539372747	507.5493936919013	799387.004351051	0.10774447299541427	0.22418607209216854	1.037223553856244e-07	6.984127629587176	-0.37632106472811033	
FHDTSS(ph)PLMVTPPSAEAHWAVR	ddPTM_K562_Methotrexat_30min_R1	1	FHDTSSPLMVTPPSAEAHWAVR	22	0	M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2	M0R165	EPS15L1	Epidermal growth factor receptor substrate 15-like 1	1	FHDT(0.045)S(0.157)S(0.797)PLMVTPPSAEAHWAVR	107.18	0.00052088	24110000.0	2995.2	2539.1	3417.8	3360.1	2816.6	2406.7	2762.7	3876.5	4042.0	4064.3	True	False	2863.5345943512134	2958.6431176794013	2700.4504870005303	3065.5252498917966	3187.0322691651345	2871.760713511764	3382.3058013407867	3740.1612977788827	3854.088302241312	3328.2158861277717	0.8603812650154753	0.8889576935231952	0.811380805631086	0.9210716356078681	0.9575797899556036	0.8628528952948805	1.0162519250744717	1.1237736450234876	1.1580042984307033	1.0	11.700533302198872	-8.947104656429973	3.2082464470108447	1.103590763113008	0.8855073903399197	0.7658524056313062	0.05274361036935661	0.1149020720289897	2.409426324576933	0.025516103127997014	0.015612679777015913	1.1295236888760356e-09	8.947104656429973	-0.2180833727730883	
FHFPPLDTHS(ph)PTNDVQPGR	ddPTM_K562_Methotrexat_30min_R1	2	FHFPPLDTHSPTNDVQPGR	19	0	P41162	P41162	ETV3	ETS translocation variant 3	1	FHFPPLDT(0.047)HS(0.879)PT(0.075)NDVQPGR;FHFPPLDT(0.026)HS(0.964)PT(0.01)NDVQPGR	110.33	0.00032695	21708000.0	2378.5	1767.17	2325.76	2027.42	2087.7	1921.47	1953.87	2194.27	2577.83	2732.31	True	False	2273.9439879354863	2059.1648057459356	1837.6147593909384	1849.679236372616	2362.2691430576047	2292.7668833637135	2392.075084542557	2117.0962803759253	2457.98724595911	2237.462182374769	1.0163049931516595	0.9203126747645879	0.8212942206873657	0.8266862568418597	1.0557805900211328	1.0247176025698213	1.0691019063409093	0.946204274223267	1.0985603534761348	1.0	11.12764758278805	-7.77209203892212	24.998044434153847	1.0311559153433962	0.8925286632688898	0.5245719909751169	0.06349856633581136	172.49836473564037	404791.6945511512	0.020275596569673978	0.023222644347250312	1.690082718766073e-08	7.77209203892212	-0.13862725207450644	
FHNWFDDR	ddPTM_K562_Methotrexat_30min_R1	1	FHNWFDDR	8	0	P46977;A0A0C4DH80;E9PN73;E9PI32	P46977	STT3A	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A	0		92.06200000000001	0.028356	7753100.0	2194.8	1634.5	1662.2	1822.0	1483.7	1548.3	1316.2	2632.0	2717.6	3128.2	False	True	2098.319219979315	1904.5733432503573	1313.326935307005	1662.2680888374923	1678.8325561884217	1847.48706225548	1611.3913547344068	2539.431068168198	2591.2593691664983	2561.6526671222337	0.8191271388624952	0.7434939824960576	0.5126873569407048	0.6489045568792462	0.6553708774556177	0.7212090405413748	0.6290436542845785	0.9913252880692061	1.0115576566738553	1.0	11.322859159486704	-9.267189149043906	24.390427724233557	1.001081158378736	0.6719682901434977	0.7945569557445732	0.07577780721428737	154.94946587118537	657286.1540791903	0.04231325595249331	0.021223833466777333	5.405188585386306e-10	9.267189149043906	-0.32911286823523833	
FIHQQPQSSS(ph)PVYGSSAK	ddPTM_K562_Methotrexat_30min_R1	1	FIHQQPQSSSPVYGSSAK	18	0	F5H836;F5GZ78;A0A1B0GU60;A0A1B0GTU4;P49023-2;P49023;P49023-3	F5H836	PXN	Paxillin	1	FIHQQPQS(0.168)S(0.168)S(0.656)PVYGS(0.006)S(0.002)AK	108.96	0.0032954	0.0	1474.3	1248.2	2242.4	1724.0	1192.9	1188.6	1152.6	1352.3	1624.6	1795.8	True	False	1409.4915372769756	1454.4438342276496	1771.7508842091356	1572.859596682677	1349.7872590666364	1418.2801280093413	1411.099890189087	1304.738842509063	1549.0727005990198	1470.563218342211	0.9584705503962744	0.989038632332493	1.2048110969390748	1.0695627206396379	0.9178709505520427	0.9644468937610113	0.9595642489819936	0.8872375061712175	1.0533873561350962	1.0	10.52215309053165	-7.750303254693906	24.857332409429343	0.9579384757516195	1.0613927944823318	0.26878558234280747	0.07347950469011845	262.07491503349064	584983.4453579856	0.022506899696004116	0.028776667502593698	1.7770381247683586e-08	7.750303254693906	0.10345431873071231	
FILPEGASQGMT(ph)PFR	ddPTM_K562_Methotrexat_30min_R1	1	FILPEGASQGMTPFR	15	0	Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;H3BQK9;H3BPE1;A0A590UJG2;H0Y390;Q9UPN3-5;H0Y6T5;H0Y4F5;H0Y314;H0Y7I1	Q9UPN3	MACF1	Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5	1	FILPEGAS(0.213)QGMT(0.787)PFR	85.287	0.011179000000000001	0.0	1460.0	1377.4	1103.0	1783.8	1161.5	1277.9	1165.2	1416.2	1873.6	1698.9	True	False	1395.8201481546384	1604.9919382031462	871.4953733868521	1627.4170235281656	1314.257608689663	1524.8360891663606	1426.525760930352	1366.3914432901988	1786.4967449478768	1391.21274732241	1.0033117873891653	1.1536639103488557	0.6264285423377344	1.169783001672724	0.9446848522766497	1.0960481005519307	1.0253828996865555	0.9821585130814943	1.2841290797444518	1.0	10.44212734152113	-8.393622809206699	0.9386167107662358	1.0901911523180283	0.970535674484869	0.08122557481813897	0.1597684626642565	1.5860636013900948	2.9366991614651288	0.09978897952580718	0.0803385187854725	4.039961168834598e-09	8.393622809206699	-0.11965547783315933	
FIQELSGSS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	FIQELSGSSPK	11	0	I3L254;Q01664	I3L254	TFAP4	Transcription factor AP-4	1	FIQELSGS(0.066)S(0.934)PK;FIQELSGS(0.012)S(0.988)PK	220.31	9.4746e-25	81345000.0	10503.5	8195.0	13536.599999999999	11532.400000000001	7517.4	7900.900000000001	7059.0	9374.7	9695.5	11999.8	True	False	10041.778716535786	9549.084458817179	10695.452648584282	10521.372397206082	8506.069864454306	9427.637105324751	8642.160441475593	9044.986487369455	9244.758321222318	9826.519939560572	1.0219059014075373	0.9717666597686871	1.0884273083826426	1.0707119572258845	0.865623833948551	0.9594075179525196	0.8794731496634054	0.9204669143299915	0.9407967803539338	1.0	13.262464861465274	-7.754173876900169	24.999990950391773	0.9228326063321305	1.037044970302089	0.5812438200655443	0.04586698913013613	117.8428240588373	405485.19615477714	0.013542316994104608	0.01711930530292874	1.761270751675999e-08	7.754173876900169	0.11421236396995849	
FIQELSGSS(ph)PKR	ddPTM_K562_Methotrexat_30min_R1	2	FIQELSGSSPKR	12	1	I3L254;Q01664	I3L254	TFAP4	Transcription factor AP-4	1	FIQELSGS(0.245)S(0.754)PKR;FIQELS(0.009)GS(0.059)S(0.932)PKR	116.9	4.6273e-05	13493000.0	4683.5	3714.8999999999996	5565.1	5337.2	3328.3999999999996	3454.7	2946.1	4287.9	4370.2	5768.6	True	False	4477.618947864556	4328.724082496632	4397.06156159127	4869.2959625375715	3766.142939959252	4122.27188140154	3606.8379199080955	4137.092126595141	4167.0303558770365	4723.850641123112	0.9478747928406107	0.9163549848111757	0.9308214623284223	1.0307895681858137	0.7972612231160294	0.8726507662023487	0.76353767168442	0.8757880891872426	0.8821257640115207	1.0	12.20574763493537	-7.769413090671659	24.999992466842613	0.8543033591835709	0.9517642091029868	0.3121637243913439	0.06499585376948024	198.61306935733433	622710.3904130996	0.019341777616336545	0.022315288147628468	1.7005402251126712e-08	7.769413090671659	0.09746084991941584	
FITHAPPGEFNEVFNDVR	ddPTM_K562_Methotrexat_30min_R1	1	FITHAPPGEFNEVFNDVR	18	0	P52907	P52907	CAPZA1	F-actin-capping protein subunit alpha-1	0		110.04	0.0010804	5378600.0	3748.0	3307.5	4778.2	4628.9	3576.7	3043.7	3650.5	4984.8	4974.6	5123.8	False	True	3583.2424077284827	3854.0081571126057	3775.321117966505	4223.091523830879	4047.09874214405	3631.851948192859	4469.2175508721675	4809.481758588463	4743.331931798522	4195.830169362861	0.8540008205986565	0.9185329247246056	0.8997792964865853	1.006497249261201	0.9645525626120859	0.8655860226927052	1.0651569225812638	1.146252723407722	1.1304871122843372	1.0	12.034740569160556	-8.883085250172678	5.444932638976303	1.103870772840114	0.9239509641387967	0.6837467041815659	0.055614405528198504	0.11858145507179281	5.169481567084316	0.023965252340423876	0.016015464384509445	1.308924961337949e-09	8.883085250172678	-0.1799198087013173	
FIVS(ph)PVPESR	ddPTM_K562_Methotrexat_30min_R1	4	FIVSPVPESR	10	0	F5GWT4;Q9H4A3-4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7;H0YH68	F5GWT4	WNK1	Serine/threonine-protein kinase WNK1	1	FIVS(0.994)PVPES(0.006)R;FIVS(1)PVPESR;FIVS(1)PVPESR;FIVS(0.996)PVPES(0.004)R	117.09	0.0026639	105969000.0	7842.3	7095.9	9093.0	8664.4	7485.4	7866.299999999999	6812.700000000001	8365.6	8181.400000000001	8256.6	True	False	7497.561882104878	8268.376865322854	7184.503563197327	7904.805504348826	8469.86130356057	9386.351145010836	8340.621396747521	8071.377106332777	7801.048499741975	6761.249731910186	1.1089017828641377	1.2229065917059205	1.0625999405538247	1.1691337870632923	1.2527064728265358	1.3882568337494328	1.2335916771988737	1.1937700020514483	1.153787954751085	1.0	12.723074219836667	-7.566250077469064	6.438003858207556	1.2234196461264708	1.1365961910350038	0.07667675153116982	0.09873520289860924	0.3866669454898933	40.36069113942668	0.029229730326506657	0.03817333718239634	2.7148755264053735e-08	7.566250077469064	-0.08682345509146705	
FKIDSNIS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	FKIDSNISPK	10	1	Q9H501	Q9H501	ESF1	ESF1 homolog	1	FKIDS(0.3)NIS(0.7)PK	103.44	0.011192	11693000.0	1857.7	1172.3	3314.6	1939.1	1273.5	1164.2	1339.5	1629.7	1581.9	2236.6	True	False	1776.037732347174	1366.0026493070618	2618.9107566890857	1769.10211364697	1440.987571817723	1389.1651733370986	1639.91697285119	1572.382527277246	1508.357814278954	1831.5300669028804	0.9697016524279374	0.7458259484743125	1.4299032290076825	0.9659148629967751	0.7867670849949161	0.7584724916289136	0.8953808635117257	0.8585076246857071	0.8235506703035397	1.0	10.838833669582778	-7.531559860811549	18.47616135444865	0.8469565412283596	1.0481602400995054	0.21615665847814125	0.16768725620669966	12.229303593798605	26024.34585245084	0.049862427892938675	0.06469634679311527	2.940628345444445e-08	7.531559860811549	0.20120369887114575	
FLEESVSMS(ph)PEER	ddPTM_K562_Methotrexat_30min_R1	1	FLEESVSMSPEER	13	0	A0A087WTB8;Q5TBK7;P15374	A0A087WTB8	UCHL3	Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L3	1	FLEESVS(0.016)MS(0.984)PEER	152.4	1.1146000000000001e-08	9814100.0	2615.4	2359.6	2914.0	2730.1	2049.6	2568.1	2219.6	2883.1	2481.3	2526.5	True	False	2500.4301475915368	2749.4837936577183	2302.3912221661712	2490.756371753696	2319.1583252435075	3064.3489792535665	2717.401801374022	2781.6997388433624	2365.9449045896517	2068.926367714443	1.2085641067805515	1.3289423135416325	1.112843481573314	1.2038883599831787	1.1209477347449042	1.4811300329836163	1.3134357238512813	1.3445136483597167	1.1435616760026732	1.0	11.014666585817707	-10.013567815050827	5.54590741906909	1.0001266786385126	1.2629492801643813	0.3863610395488041	0.10506366884894067	0.15485185799088347	20.61153988128379	0.10595340508288416	0.02754478157482826	9.692419104314932e-11	10.013567815050827	0.2628226015258688	
FLEGVR	ddPTM_K562_Methotrexat_30min_R1	1	FLEGVR	6	0	F8VWS0;Q8NHW5;P05388;F8VW21;F8VZS0;F8VU65	F8VWS0	RPLP0;RPLP0P6	60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0	0		114.6	0.03253	14853000.0	3977.8	3851.8	4303.4	4489.4	3630.3	3647.3	3647.6	4752.4	4507.9	4733.5	False	True	3802.9406748832334	4488.244480594507	3400.1751494405994	4095.821272243157	4107.748081641053	4352.089105576706	4465.667152050765	4585.255398314037	4298.328712932606	3876.2172814471883	0.9810958464803612	1.1578929029795817	0.8771889970448565	1.0566542004358381	1.0597311201572845	1.1227670663373779	1.152068325329664	1.1829201165426229	1.1088977734828689	1.0	11.920433727984834	-8.028173476977704	2.178480370554642	1.1276295098711844	1.0175405666847368	0.23830325463868518	0.07892126506732973	0.411961999033249	3.909626919684235	0.027877593957479945	0.029939652804839356	9.37187576785777e-09	8.028173476977704	-0.11008894318644757	
FLENGS(ph)QEDLLHGNPGSTYLASNSTSAPNWK	ddPTM_K562_Methotrexat_30min_R1	2	FLENGSQEDLLHGNPGSTYLASNSTSAPNWK	31	0	Q7Z2W4-2;Q7Z2W4;C9J6P4;Q7Z2W4-3	Q7Z2W4-2	ZC3HAV1	Zinc finger CCCH-type antiviral protein 1	1	FLENGS(0.668)QEDLLHGNPGS(0.193)T(0.058)Y(0.068)LAS(0.01)NS(0.001)TSAPNWK;FLENGS(0.94)QEDLLHGNPGS(0.029)T(0.012)Y(0.012)LAS(0.005)NSTSAPNWK	95.781	4.9607e-08	44580000.0	7698.4	5812.3	10521.5	9518.2	6115.9	5982.6	6123.5	8598.1	8041.8	11790.3	True	False	7359.9875538038805	6772.683782792322	8313.180934804866	8683.754183958841	6920.248049061651	7138.652779596743	7496.850752709412	8295.69994955053	7667.938473271692	9654.962419657078	0.7623010047992802	0.7014717912317748	0.8610267521994281	0.8994083877819244	0.716755565508192	0.739376547449088	0.7764764301356734	0.8592161822050026	0.7941966151686004	1.0	13.23705492839732	-10.927531100001824	0.6893517324139631	1.0077809175090222	0.7824351590853145	0.5188314825214415	0.06134849200026881	3.6325362306214886	2.018405903985947	0.1422521267020592	0.024645202213266167	1.1815956949740163e-11	10.927531100001824	-0.22534575842370774	
FLESAAADFS(ph)DEDEDDDVDGREK	ddPTM_K562_Methotrexat_30min_R1	2	FLESAAADFSDEDEDDDVDGREK	23	1	O43815-2;O43815	O43815-2	STRN	Striatin	1	FLESAAADFS(1)DEDEDDDVDGREK;FLESAAADFS(1)DEDEDDDVDGREK	145.61	3.594e-17	36275000.0	4441.6	2751.7	5955.799999999999	4556.3	3134.3	2763.3	2652.0	3823.0	4061.2	4857.6	True	False	4246.352582221674	3206.37165409728	4705.758970822675	4156.856253112108	3546.515387788213	3297.2686166315107	3246.7785083996687	3688.5429231029734	3872.3956984320653	3977.841568893603	1.0675016861978128	0.8060581595734846	1.182993060261959	1.045002969856413	0.8915677827698505	0.8289089848162589	0.8162161444008259	0.9272724564867235	0.9734916867262599	1.0	11.95777010172786	-7.767401213071724	24.778655835867557	0.8942384156608811	1.020979922551989	0.24140333365253341	0.10203008965375039	182.81935375006944	759835.4467815638	0.03186215463513818	0.0370871604283342	1.708436285852109e-08	7.767401213071724	0.12674150689110797	
FLIVAHDDGR	ddPTM_K562_Methotrexat_30min_R1	2	FLIVAHDDGR	10	0	Q16658	Q16658	FSCN1	Fascin	0	;	97.456	0.012312	76839000.0	12263.0	9755.400000000001	10651.3	11439.900000000001	10364.9	9199.3	9734.9	13603.599999999999	14127.5	15307.6	False	True	11723.933203301602	11367.314036552169	8415.737688626816	10436.981728590572	11728.066025232445	10976.934529359194	11918.19913326543	13125.153677406115	13470.715608588353	12535.245306323222	0.9352775248353244	0.9068282078866133	0.6713660150217897	0.8326108882229682	0.9356072209704898	0.8756856576091127	0.9507751018844017	1.0470599782188006	1.074627203489448	1.0	13.61370260856958	-8.87246400681561	1.2777412450351262	1.052386331298965	0.8435213113724936	0.5529103540155322	0.0730577772386336	0.3620417970859374	1.162206222613944	0.053821275162982525	0.028028636879703053	1.341331096792293e-09	8.87246400681561	-0.20886501992647133	
FLLGPPQGGS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	FLLGPPQGGSPR	12	0	Q8IY92-2;Q8IY92	Q8IY92-2	SLX4	Structure-specific endonuclease subunit SLX4	1	FLLGPPQGGS(1)PR	110.8	0.0018287	25957000.0	1912.1	1725.1	2343.3	2335.3	1984.6	1991.2	1719.2	2006.0	2270.7	2476.1	True	False	1828.046373483894	2010.1434533136683	1851.4733530892215	2130.567874787154	2245.6096859281142	2375.9712189905777	2104.7743633637665	1935.4478429883775	2165.1356526223017	2027.654296100429	0.9015572215636464	0.9913639899955148	0.913110956167411	1.0507549925471258	1.1074913954744927	1.1717831898465283	1.0380341300840357	0.9545255553230241	1.0678031540121389	1.0	10.985595986403846	-7.298432468732909	8.061049594066246	1.0603075434729525	0.9409839576506421	0.4634492484603675	0.059150478817635806	0.2810307773137889	56.43533160325434	0.01807094040407401	0.02712134015876569	5.0299947442190685e-08	7.298432468732909	-0.1193235858223104	
FLLSLPEHR	ddPTM_K562_Methotrexat_30min_R1	2	FLLSLPEHR	9	0	Q15008-4;C9J7B7;Q15008	Q15008-4	PSMD6	26S proteasome non-ATPase regulatory subunit 6	0	;	131.11	0.0016361000000000001	10406000.0	8588.0	8094.5	9478.4	8794.8	7704.599999999999	7055.2	6904.0	8937.7	9414.6	9195.1	False	True	8210.481802980847	9431.97854202509	7489.013369999946	8023.773538807892	8717.88994568263	8418.5175493282	8452.397745848913	8623.356025063415	8976.9173009107	7529.778287659243	1.0904015349877203	1.2526236738581553	0.9945861729121417	1.0656055506917477	1.1577883986266388	1.11802993763117	1.122529432201447	1.1452337234412953	1.1921887946718448	1.0	12.878391670408744	-7.776299672644929	24.99260842957008	1.1296551866152806	1.1040614590551627	0.013758415245801348	0.07593552247437492	1220.8867082207128	2053323.5793880185	0.0234915459772868	0.026754331434392653	1.6737875276404692e-08	7.776299672644929	-0.025593727560117907	
FLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAR	ddPTM_K562_Methotrexat_30min_R1	1	FLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAR	34	0	D6RFH4;H3BUX2;O43169	D6RFH4	CYB5B	Cytochrome b5 type B	0		104.83	9.3876e-15	8099400.0	1968.5	1767.4	2175.6	2050.8	1583.4	1745.8	1630.0	2273.4	2406.4	2165.9	False	True	1881.967097015346	2059.4328093366053	1718.9712913331227	1871.0095480724078	1791.6448537229542	2083.151142082037	1995.5689927192545	2193.4432334246126	2294.52698924134	1773.6345219998877	1.0610794240142025	1.161137079703693	0.9691801044754538	1.0549014043562501	1.0101544774301972	1.1745098081047438	1.1251297648791372	1.236694034885701	1.2936864730475093	1.0	10.792493040851245	-8.276506606467631	22.540341157899107	1.178242801325783	1.0530320116201966	0.3086599594236439	0.08483737638010211	259.4626316095653	388149.46909531543	0.02953852148197852	0.026190877040182026	5.290459493257859e-09	8.276506606467631	-0.12521078970558652	
FLPISS(ph)TPQPERR	ddPTM_K562_Methotrexat_30min_R1	1	FLPISSTPQPERR	13	1	Q08AE8-5;J3KNG6;Q08AE8-4;Q08AE8-3;Q08AE8-2;Q08AE8	Q08AE8-5	SPIRE1	Protein spire homolog 1	1	FLPIS(0.062)S(0.531)T(0.408)PQPERR	116.96	0.00095202	7576000.0	3888.9	4507.2	5016.6	4513.0	4024.9	4557.9	3457.6	3576.4	3194.2	3184.1	True	False	3717.9486124373793	5251.938190699301	3963.6842158952713	4117.352296884522	4554.24489816188	5438.649668058033	4233.054815476128	3450.615984877182	3045.7023391932685	2607.428635440158	1.4259061827821629	2.014221259717325	1.520150604323698	1.5790853260263726	1.7466422038404443	2.085828771739304	1.6234595102395006	1.323378879090467	1.168086557689862	1.0	11.348412051805777	-9.444784664463988	2.0772035013745143	1.0714538427115328	1.7327598373794597	0.640359032433669	0.19557159447987896	0.2178023664135038	1.7175263531572706	0.16088803740612365	0.05602293833282674	3.590999424588844e-10	9.444784664463988	0.6613059946679269	
FLPLFDR	ddPTM_K562_Methotrexat_30min_R1	1	FLPLFDR	7	0	P61604;B8ZZL8;S4R3N1	P61604	HSPE1;HSPE1-MOB4	10 kDa heat shock protein, mitochondrial	0		128.82	0.0016655	16853000.0	2349.4	1713.6	1563.6	2132.2	1555.9	1200.4	1662.2	2273.4	2205.6	3214.8	False	True	2246.12318909213	1996.7432737802446	1235.4217278582796	1945.2733364540618	1760.5281217049048	1432.3603110065742	2034.9906623913773	2193.4432334246126	2103.0621374130214	2632.568567951077	0.8532059587873463	0.7584772142646624	0.4692837796889013	0.7389259904322508	0.6687491992184349	0.5440923091022762	0.7730057583932967	0.8331951008333147	0.7988631950619355	1.0	11.362255392875928	-9.822505989626485	0.9491854532678684	0.9872817267908588	0.672657239389873	0.44512122178710634	0.10810028284467567	0.49631555679350287	0.977633773316194	0.1055452946208196	0.037104554507617134	1.5048527642949048e-10	9.822505989626485	-0.3146244874009858	
FLPLNIRNS(ph)PFTR	ddPTM_K562_Methotrexat_30min_R1	2	FLPLNIRNSPFTR	13	1	A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8	A0A2R8Y880	RBBP6	E3 ubiquitin-protein ligase RBBP6	1	FLPLNIRNS(0.986)PFT(0.014)R;FLPLNIRNS(0.999)PFT(0.001)R	103.46	0.0027488000000000005	165101000.0	5123.6	4554.7	5236.200000000001	5709.7	4812.299999999999	4618.200000000001	4677.8	6279.0	6184.0	7259.4	True	False	4898.372678825417	5307.286758337351	4137.193176906834	5209.139465881135	5445.201799653262	5510.601789645584	5726.915726467562	6058.164011028917	5896.507189772459	5944.652314975752	0.8239964962266085	0.8927833752307512	0.6959520856223043	0.8762731930946214	0.9159832251140616	0.9269847078799363	0.9633726958329139	1.0190947577820837	0.991901103268562	1.0	12.537376718160582	-8.141044640927703	1.0681095674155172	0.999692128207084	0.8122187700394087	0.7026709775750553	0.050131675501851415	0.2877153726256672	0.693363041402904	0.026482209987067233	0.026910656500477234	7.226955142485368e-09	8.141044640927703	-0.1874733581676753	
FLPLNIRNSPFT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	FLPLNIRNSPFTR	13	1	A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8	A0A2R8Y880	RBBP6	E3 ubiquitin-protein ligase RBBP6	1	FLPLNIRNS(0.004)PFT(0.996)R	85.973	0.012303	0.0	1023.4	1044.9	1078.1	1091.3	792.62	1142.7	985.22	1107.7	1191.6	1271.1	True	False	978.4125613845597	1217.5519647367987	851.821543108219	995.6274233525553	896.8634229871722	1363.510602621802	1206.1806644213882	1068.7415631496638	1136.2027760887547	1040.891472789167	0.9399755757080138	1.1697203758180987	0.8183576918213027	0.956514150975488	0.8616300992301742	1.3099450214229795	1.1587957975957985	1.0267559981886198	1.091566994053849	1.0	10.02360394039744	-8.23892013229747	24.997022804292783	1.1216714883591647	0.9546214439568221	0.3425610059072659	0.11629496647654712	981.4259311634354	1089412.5458299716	0.03907389557220006	0.039049165112780386	5.7687254175666795e-09	8.23892013229747	-0.1670500444023426	
FLPS(ph)PVVIK	ddPTM_K562_Methotrexat_30min_R1	2	FLPSPVVIK	9	0	H7C399;A0A087WTG3;Q13618-3;Q13618-2;Q13618	H7C399	CUL3	Cullin-3	1	FLPS(1)PVVIK;FLPS(1)PVVIK	87.616	0.016475999999999998	14673000.0	9458.0	7176.4	12446.7	10633.2	7762.6	7291.0	7470.099999999999	9061.0	9475.2	10969.5	True	False	9042.237644689432	8362.178122056815	9834.307764219526	9701.003865108023	8783.517962302521	8699.882562103401	9145.460081295761	8742.31949417631	9034.700020137772	8982.817253371693	1.0066148948199336	0.9309081868406127	1.0947910312355766	1.079951154685548	0.9778132755629237	0.9685026775801219	1.0181059931797032	0.973226911734722	1.0057757789458095	1.0	13.132952268608811														
FLQDYFDGNLKR	ddPTM_K562_Methotrexat_30min_R1	1	FLQDYFDGNLKR	12	1	P30101	P30101	PDIA3	Protein disulfide-isomerase A3	0		67.01899999999999	0.031077999999999998	0.0	1727.5	1632.5	2271.4	1952.8	1218.8	1543.9	1215.9	1678.2	1645.3	1944.7	False	True	1651.5611684500943	1902.242877244544	1794.664180517584	1781.6010559175927	1379.093563040001	1842.2368245276973	1488.59652653211	1619.1767547871857	1568.8103621171772	1592.4959854717108	1.0370896903459934	1.194504033039106	1.126950520999894	1.118747596333731	0.8659950013195806	1.1568235281811472	0.934756847183621	1.0167540575039955	0.9851267296303308	1.0	10.637074020253644	-7.570879651531095	24.999450635006557	0.9987018902826404	1.1263198681560562	0.3874035502105221	0.07734719956434283	112.84764346498783	58771.72299056311	0.02139475884813012	0.0276205152992378	2.6860886915293206e-08	7.570879651531095	0.12761797787341578	
FLRENPYYDSR	ddPTM_K562_Methotrexat_30min_R1	1	FLRENPYYDSR	11	1	A0A087WVQ6;Q00610-2;Q00610	A0A087WVQ6	CLTC	Clathrin heavy chain;Clathrin heavy chain 1	0		115.0	0.0071663	26977000.0	2432.1	2236.2	2716.9	2609.4	2174.0	1919.5	2241.1	2341.4	2138.0	2713.8	False	True	2325.187796114313	2605.694041099081	2146.6598186353035	2380.637953354857	2459.919105717887	2290.416208744683	2743.7237236706255	2259.0516348818464	2038.6048466580698	2222.3045227403354	1.0462957584440822	1.172518893983974	0.9659611437897115	1.071247405112275	1.1069226024363878	1.0306491236045179	1.2346299508436969	1.0165355880643208	0.917338207161751	1.0	11.11784080766496	-9.518172952696483	24.859700685082064	0.9614249841011865	1.0886835481742256	0.35093812908869193	0.07254142491592497	211.57709597940718	1117753.276599362	0.044963036181601766	0.01797391792279137	3.0326832130706695e-10	9.518172952696483	0.12725856407303915	
FLRRT(ph)FGRR	ddPTM_K562_Methotrexat_30min_R1	1	FLRRTFGRR	9	3	Q9H329-2;Q9H329	Q9H329-2	EPB41L4B	Band 4.1-like protein 4B	1	FLRRT(1)FGRR	72.848	0.019445	0.0	127.04	0.0	174.85	152.59	140.83	165.27	204.8	118.44	203.81	251.72	True	False	121.45547371340088	0.0	138.1513744666284	139.21267161125846	159.3516134582568	197.20608847055684	250.7316133183454	114.27439806756892	194.33491758530468	206.1310687833287	0.5892147866417304	0.0	0.6702113140054785	0.6753599660301067	0.7730596576188942	0.9567024012175807	1.2163698310898385	0.5543773616566583	0.9427735407978536	1.0	7.687418158997082	-7.273351672542779	1.4045826668615062	0.9084830271043319	0.3038144434669251	0.5189892163143695	0.21904425345149978	0.3440551826362604	1.3117628866234017	0.07227658838441357	0.1700225430080241	5.3290319918810786e-08	7.273351672542779	-0.6046685836374068	
FLS(ph)PEFIPR	ddPTM_K562_Methotrexat_30min_R1	1	FLSPEFIPR	9	0	A0A0A0MRF4;P49406	A0A0A0MRF4	MRPL19	39S ribosomal protein L19, mitochondrial	1	FLS(1)PEFIPR	89.679	0.014144	4794900.0	1433.1	1327.4	1804.9	1715.6	1531.7	893.99	1540.6	1688.2	1450.3	1830.7	True	False	1370.1026399454888	1546.73028805783	1426.0761554178864	1565.1960116408352	1733.1453975290192	1066.740915058952	1886.1187669836088	1628.8250491191313	1382.8758695548179	1499.1424901542966	0.913924225978328	1.0317433454231795	0.9512612475356562	1.0440608694105789	1.1560911713940136	0.7115673940701658	1.2581317515651786	1.0865044916120596	0.9224445832447107	1.0	10.549921799414966	-5.0503360421316685	0.9939387844569678	1.0266284124818181	7.112416279388356e-16	0.0442597976701381	0.13820365024191542	66.83157261988839	7.94407039000021	0.04298598803019868	126.14784673430013	8.905615855472317e-06	5.0503360421316685	-1.0266284124818175	
FLSAAKPAGASGLS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	FLSAAKPAGASGLSPR	16	1	Q13469-3;Q13469-4;Q13469-2;Q13469	Q13469-3	NFATC2	Nuclear factor of activated T-cells, cytoplasmic 2	1	FLSAAKPAGAS(0.001)GLS(0.999)PR	172.56	6.1392e-07	10227000.0	1364.9	835.48	1435.5	1275.7	1183.3	1090.0	966.41	1265.9	1514.6	1916.9	True	False	1304.9006302851135	973.5288692681596	1134.2081672682011	1163.861361652024	1338.9246907985168	1300.6270734731463	1183.1520431004992	1221.37757948105	1444.1865765894831	1569.7308348592196	0.8312894168267662	0.6201884091519868	0.7225494601244308	0.7414400837430223	0.8529645089876811	0.8285669393694444	0.753729248878907	0.77808089919479	0.9200217926017897	1.0	10.616301482947657	-10.627234339082968	0.22329518232938378	1.0939230163100304	0.6860864528412793	0.5795303669938165	0.06585655506494488	4.345586152183459	0.4864969330623172	0.5212027162126714	0.19075508832359622	2.3592048964980284e-11	10.627234339082968	-0.4078365634687511	
FMLRT(ph)T(ph)EQQGEY(ph)FCCGDPK	ddPTM_K562_Methotrexat_30min_R1	1	FMLRTTEQQGEYFCCGDPK	19	1	O76039-1	O76039-1	CDKL5	Cyclin-dependent kinase-like 5	3	FMLRT(1)T(1)EQQGEY(1)FCCGDPK	40.179	0.033398000000000004	0.0	470.04	508.63	563.8	613.51	360.84	417.23	325.59	600.44	362.43	505.38	True	False	449.3776044100043	592.6724622682342	445.46608478287146	559.7245308357244	408.2967847779405	497.8537925368813	398.61184560703146	579.3221848673684	345.5807084070557	413.85078476767274	1.0858445143755753	1.4320921551494659	1.0763929927859068	1.3524790853059325	0.986579704100718	1.2029789742125683	0.9631776965961388	1.3998334815109457	0.8350369774000973	1.0	8.692966882911016	-8.725932147720869	0.3164535882789346	0.9819587036736821	1.274273536484914	0.1473746615694027	0.179025628645279	3.4271213452647626	0.8996933534957497	0.23942109911409307	0.3611707605895486	1.8796104560188917e-09	8.725932147720869	0.29231483281123194	
FNDS(ph)EGDDTEETEDYR	ddPTM_K562_Methotrexat_30min_R1	1	FNDSEGDDTEETEDYR	16	0	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	FNDS(1)EGDDTEETEDYR	85.046	0.015892	20379000.0	284.68	57.535	240.14	356.22	321.4	141.66	162.06	230.58	379.84	260.59	True	False	272.1658080662074	67.04168082221426	189.73789570726981	324.99074566722913	363.6697334764162	169.03379011762007	198.40608034360872	222.47037070601186	362.18132130711035	213.39462583127127	1.2754107888424793	0.3141676158012684	0.8891409283066642	1.522956561821738	1.7042122408647993	0.7921183087866195	0.9297613731869995	1.0425303347700832	1.6972373127778908	1.0	7.737380033302559	-7.015764237078344	23.89802470813517	1.2287372963230243	0.7465055285336835	0.20945985504333553	0.3695682664701199	554.2283246699308	840196.4309989131	0.10130768121008855	0.18289614875972715	9.643523939317496e-08	7.015764237078344	-0.48223176778934085	
FNDS(ph)EGDDTEETEDYRQFR	ddPTM_K562_Methotrexat_30min_R1	4	FNDSEGDDTEETEDYRQFR	19	1	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	FNDS(0.972)EGDDT(0.005)EET(0.001)EDY(0.022)RQFR;FNDS(0.988)EGDDT(0.007)EET(0.005)EDYRQFR;FNDS(0.997)EGDDT(0.003)EETEDYRQFR;FNDS(0.983)EGDDT(0.013)EET(0.002)EDY(0.003)RQFR	131.56	3.2808999999999997e-07	1109018000.0	2820.34	2108.5429999999997	3573.5899999999997	2790.7799999999997	2131.29	2246.0	2260.0499999999997	2588.5099999999998	2285.7799999999997	2609.24	True	False	2696.361230579762	2456.9438916470685	2823.5422949968447	2546.1166503654745	2411.5919921000345	2680.007712863016	2766.9237435553046	2497.4706361185654	2179.514586713791	2136.681351947452	1.261938860524147	1.1498878339569525	1.321461570497333	1.1916220675791678	1.12866244182925	1.2542851606863867	1.2949632106038766	1.1688549786996907	1.020046617960745	1.0	11.061156056374163	-9.704542177236442	3.3786720026416375	1.0007020839183194	1.2255951855103047	0.6948591204820576	0.057204285166569405	0.1332634008290285	2.8772665307014886	0.049920151626753964	0.015046902620602659	1.9745031129187472e-10	9.704542177236442	0.22489310159198528	
FNDS(ph)EGDDTEETEDYRQFRK	ddPTM_K562_Methotrexat_30min_R1	2	FNDSEGDDTEETEDYRQFRK	20	2	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	FNDS(0.977)EGDDT(0.002)EETEDY(0.021)RQFRK;FNDS(0.999)EGDDT(0.001)EETEDYRQFRK	82.76100000000001	0.0019542	171050000.0	3469.0	2499.1	5655.5	4047.8	2680.0	2629.3	2305.0	3140.2	2952.8999999999996	4864.3	True	False	3316.506913663315	2912.0337975631473	4468.487836980366	3692.93565861493	3032.46697485002	3137.3750131036163	2821.9549252870424	3029.757386117695	2815.6203235250773	3983.3281339692726	0.8325969646790085	0.7310554640803315	1.121797573961763	0.9270980281845436	0.7612897739931491	0.7876265543751003	0.7084414917319516	0.7606095416243372	0.7068512130632312	1.0	11.959758613912566	-7.764115281906283	24.989562282393347	0.7715566511259566	0.9064640908156862	0.17514283847415313	0.11994122986096055	109.56597744972584	1023210.4902727042	0.036844261857340826	0.04369750458085877	1.721411571831005e-08	7.764115281906283	0.13490743968972962	
FNDSEGDDT(ph)EETEDYRQFR	ddPTM_K562_Methotrexat_30min_R1	1	FNDSEGDDTEETEDYRQFR	19	1	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	FNDS(0.07)EGDDT(0.853)EET(0.017)EDY(0.06)RQFR	81.89	0.029993000000000002	70547000.0	857.71	656.8	1225.9	913.29	946.24	1047.0	865.98	997.62	902.95	1207.6	True	False	820.0060953929558	765.3250363088611	968.6003429147256	833.2232836742002	1070.6871456276422	1249.317932042555	1060.1980590889693	962.5331391436011	860.9720515855495	988.891938116748	0.8292170901449359	0.7739218076409349	0.9794804726180033	0.8425827449468299	1.082713999738602	1.2633513166481707	1.0721070910012849	0.9733451169362907	0.8706432102431637	1.0	9.949669067826019	-7.759425647917303	24.991570213851194	1.054764298849026	0.8592148728479181	0.42925697439671584	0.10537292052420329	55.25473087809955	685735.3064982332	0.03484265882489335	0.04274519128670733	1.7401005812333855e-08	7.759425647917303	-0.19554942600110792	
FNDSEGDDTEET(ph)EDYR	ddPTM_K562_Methotrexat_30min_R1	2	FNDSEGDDTEETEDYR	16	0	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	FNDSEGDDT(0.058)EET(0.941)EDYR;FNDS(0.024)EGDDT(0.125)EET(0.851)EDYR	249.54	2.1932999999999997e-78	441560000.0	3235.2	2908.3	4265.2	3227.4	3125.6	2680.6	2696.0	3345.2	3496.1	3965.0	True	False	3092.9844817191024	3388.847142352408	3369.9928074067116	2944.458852861755	3536.6711852952317	3198.5880120661623	3300.6466284485327	3227.5474199225896	3333.5670740885325	3246.9000783644456	0.9525961400318562	1.0437177186122293	1.0379108460597504	0.906852315068766	1.0892454648856185	0.9851205564901093	1.0165531888222321	0.9940396507515549	1.0266922275500832	1.0	11.664847271791096	-7.784693014149013	24.999994812843436	1.0165332751475884	0.9932041139492793	0.10300358470312088	0.04562051132697888	763.7669524953686	821120.7967277549	0.013905639775173622	0.015776162873702544	1.641749852158805e-08	7.784693014149013	-0.02332916119830908	
FNDSEGDDTEET(ph)EDYRQFR	ddPTM_K562_Methotrexat_30min_R1	1	FNDSEGDDTEETEDYRQFR	19	1	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	FNDS(0.182)EGDDT(0.317)EET(0.497)EDY(0.004)RQFR	107.63	0.0024994	37003000.0	618.91	625.27	585.27	736.22	559.4	640.6	504.37	665.43	714.17	685.88	True	False	591.7034574619089	728.5852397272256	462.4298251877812	671.6767356552898	632.9709051235452	764.3868837310989	617.4878115692088	642.0264497306855	680.9683925808205	561.6604856869114	1.0534895591564624	1.2971986783726916	0.8233262566481403	1.195876784591368	1.1269635683012684	1.3609411792539632	1.0993969262659105	1.1430863770761555	1.2124199760073835	1.0	9.133554498817666														
FNEEHIPDSPFVVPVAS(ph)PSGDARR	ddPTM_K562_Methotrexat_30min_R1	1	FNEEHIPDSPFVVPVASPSGDARR	24	1	A0A087WWY3;Q60FE5;P21333-2;P21333;H0Y5C6	A0A087WWY3	FLNA	Filamin-A	1	FNEEHIPDSPFVVPVAS(0.701)PS(0.299)GDARR	70.145	0.0038253000000000002	7093900.0	2618.1	2165.5	3055.1	2944.2	2577.0	2583.6	2152.1	2413.6	2486.8	2705.1	True	False	2503.0114588244232	2523.312067793604	2413.8762604117596	2686.086557165392	2915.920669473318	3082.8441348855245	2634.763208117242	2328.7123199584958	2371.1892107901267	2215.1801770450584	1.1299358331037963	1.1391001481241037	1.0896974816882625	1.2125815249703524	1.3163356641097308	1.391690015481218	1.1894125974131309	1.051251877427363	1.0704272435090028	1.0	11.113208333310396	-9.239596673928139	4.7418613157533285	1.0436709203456564	1.2147348997785625	0.4529420302015764	0.08545070813334578	0.21076869082613825	12.95863042979822	0.05142905334180924	0.027050525259048858	5.759745923757619e-10	9.239596673928139	0.17106397943290608	
FNEEHIPDSPFVVPVASPS(ph)GDAR	ddPTM_K562_Methotrexat_30min_R1	2	FNEEHIPDSPFVVPVASPSGDAR	23	0	A0A087WWY3;Q60FE5;P21333-2;P21333;H0Y5C6	A0A087WWY3	FLNA	Filamin-A	1	FNEEHIPDSPFVVPVAS(0.38)PS(0.62)GDAR;FNEEHIPDSPFVVPVAS(0.437)PS(0.563)GDAR	129.54	1.0955999999999998e-09	85111000.0	4015.4	4094.3	5582.4	4412.299999999999	4403.6	4187.5	3634.0	4729.9	4483.700000000001	5316.0	True	False	3838.8878239042033	4770.813483799289	4410.730528009759	4025.480509537684	4982.750585988635	4996.675110246604	4449.017005853846	4563.54673606716	4275.25376565051	4353.22088690678	0.8818499965049923	1.0959272703456207	1.0132108254088257	0.9247131294543671	1.1446123951521268	1.1478110668069124	1.0220058024703484	1.0483149958673081	0.9820897851770463	1.0	12.08786751047593	-6.2499067367319	24.389674557898534	1.0448976251115103	0.8818498588604103	0.3381491445979119	0.06714383213283795	1523.5592226654187	3221998.912588515	0.01744235233418025	0.2631377226293264	5.624620990515001e-07	6.2499067367319	-0.16304776625109996	
FNGGHS(ph)PTHSPEK	ddPTM_K562_Methotrexat_30min_R1	1	FNGGHSPTHSPEK	13	0	Q9Y5K6	Q9Y5K6	CD2AP	CD2-associated protein	1	FNGGHS(0.535)PT(0.464)HSPEK	78.848	0.028257	32494000.0	3337.5	2257.0	4334.4	2938.7	2334.8	1894.6	1999.1	2638.0	2652.2	3174.8	True	False	3190.787496209661	2629.930887559531	3424.6686730806637	2681.0687336260908	2641.86712420889	2260.7046361488296	2447.4490634018775	2545.2200447673645	2528.8998008917383	2599.8129555590017	1.2273142532761903	1.0115846534021342	1.3172750238658244	1.0312544707854254	1.0161758439429138	0.869564339740257	0.9413942869115507	0.9790012159625157	0.9727237474851279	1.0	11.34419211645644	-7.545089671103251	3.357420791019537	0.9568554024616309	1.1698301714601003	0.5924381093619535	0.08123679083225843	0.16430986871959005	3.8784086294242317	0.023661771929319522	0.0332494560605018	2.8504296632899825e-08	7.545089671103251	0.21297476899846934	
FNPFVTSDR	ddPTM_K562_Methotrexat_30min_R1	2	FNPFVTSDR	9	0	J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;P61254;E5RHH1;J3KSS0	J3QRI7	RPL26;RPL26L1	60S ribosomal protein L26-like 1;60S ribosomal protein L26	0	;	175.91	2.1729e-05	56906000.0	4448.6	4235.2	5438.1	4684.7	4689.3	4081.4	3848.9	4395.200000000001	4731.5	4651.6	False	True	4253.044870603235	4934.994813908784	4296.717126033583	4273.99962446597	5306.0251437179795	4870.072786856238	4712.113801274316	4240.618324776926	4511.533597737449	3809.150165074416	1.1165337900298156	1.2955632096516136	1.127998881595586	1.1220349524819724	1.3929682248728885	1.2785195058754257	1.2370512048800417	1.1132715017797365	1.184393736719306	1.0	11.895253447894886	-10.195857137374173	1.034827724655602	1.0030857784971137	1.2242730641553963	0.3507038743398462	0.08759350623036842	0.912977936508584	1.9876173377122917	0.08669058873319667	0.028124166392338088	6.370050313871219e-11	10.195857137374173	0.2211872856582826	
FPDRLAEDEGDS(ph)EPEAVGQSR	ddPTM_K562_Methotrexat_30min_R1	3	FPDRLAEDEGDSEPEAVGQSR	21	1	Q9UIG0-2;Q9UIG0	Q9UIG0-2	BAZ1B	Tyrosine-protein kinase BAZ1B	1	FPDRLAEDEGDS(1)EPEAVGQSR;FPDRLAEDEGDS(1)EPEAVGQSR;FPDRLAEDEGDS(1)EPEAVGQSR	142.23	3.1808e-13	109693000.0	2522.81	2011.6599999999999	2686.59	2826.85	1981.62	2271.79	2232.48	2228.56	2151.85	2702.34	True	False	2411.9102931273987	2344.052622626499	2122.7114734246456	2579.0244494677627	2242.2377636948863	2710.7812653629	2733.1704692428707	2150.1802816401673	2051.81096318109	2212.9200397900063	1.0899220259925322	1.0592577140062127	0.9592355056923245	1.1654395111865397	1.0132484334624499	1.2249793108747562	1.235096804266924	0.9716484296668069	0.9271961599551493	1.0	11.111735607340758	-9.477594245859102	22.311466596492995	0.9588727668121307	1.102515994742388	0.3719014443194244	0.08352068214049795	135.2189323286194	66622.09532783748	0.048225660930027246	0.02316298143423239	3.3297049683664094e-10	9.477594245859102	0.1436432279302572	
FPEAEALS(ph)PEQAAHYLR	ddPTM_K562_Methotrexat_30min_R1	1	FPEAEALSPEQAAHYLR	17	0	Q2NKX8	Q2NKX8	ERCC6L	DNA excision repair protein ERCC-6-like	1	FPEAEALS(1)PEQAAHYLR	105.38	0.00069764	7727300.0	1772.8	1486.5	1601.5	1573.4	1497.7	1563.3	1144.6	1692.7	1681.5	1745.7	True	False	1694.8698346907825	1732.1188588202224	1265.3670357924238	1435.4624648610925	1694.6738015794292	1865.385599963825	1401.3056865438382	1633.166781568507	1603.3274320184978	1429.536813821138	1.185607686562763	1.2116643951199029	0.8851587616062228	1.0041451545582205	1.1854705560534553	1.3048881161567762	0.9802515563052635	1.1424447176026675	1.1215712785547785	1.0	10.481332057784872	-11.896584173250908	4.045639125239967	0.9999968036622005	1.111106753851478	0.07641068059289247	0.11808952349630139	18600142.859587546	36582778.261042245	1005.7908406870212	0.030562754728101292	1.2688661939488007e-12	11.896584173250908	0.1111099501892776	
FPKVGGKMT(ph)MS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	FPKVGGKMTMSK	12	2	K7ENM7	K7ENM7			2	FPKVGGKMT(1)MS(1)K	41.68899999999999	0.033137	14220000.0	2265.1	1995.4	3461.3	3271.5	2230.9	1910.7	2220.3	2403.9	3044.3	3178.9	True	False	2165.52891615416	2325.1059339992416	2734.8204314632003	2984.692674331423	2524.302453057054	2279.915733289121	2718.2587941929805	2319.353474456508	2902.7711574748187	2603.170405829188	0.8318813517950908	0.8931823782233824	1.0505729572444482	1.14656061994555	0.969703115633334	0.8758226999599357	1.0442108546202273	0.8909725883725712	1.1150907182160434	1.0	11.346054039584274	-6.605855592968976	4.668028117924991	1.006957669049617	0.8449948583760425	0.35520294780545847	0.08182032288994291	0.2176584297885758	8.30978386366076	0.021619646549891174	0.06307245532066315	2.4782459609161096e-07	6.605855592968976	-0.16196281067357443	
FPPFFT(ph)LQPNVDT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	FPPFFTLQPNVDTR	14	0	K7EP45;K7EKV4;Q9BRG1	K7EP45	VPS25	Vacuolar protein-sorting-associated protein 25	2	FPPFFT(1)LQPNVDT(1)R	94.339	0.0062505	0.0	1636.8	1782.0	2143.3	2045.5	1755.7	2352.7	2119.0	2162.9	2001.9	2178.2	True	False	1564.8482318489807	2076.445211179037	1693.4506199275074	1866.1741908436284	1986.6053237851409	2807.325977761718	2594.2396905350297	2086.8295810566096	1908.8321059517275	1783.7068728104507	0.877301229087809	1.1641179628956302	0.9493996159017242	1.0462336717373524	1.1137510058785605	1.5738718174799815	1.4544092025880264	1.1699397546013552	1.0701489886306972	1.0	10.800662832717903	-8.012051517975426	23.146397569169896	1.2842822943433467	1.0240411074765174	0.29934580181292614	0.173137791431341	264.93293476709016	508837.90027959464	0.05753701847644147	0.0606488096128254	9.726318389461583e-09	8.012051517975426	-0.2602411868668293	
FPY(ph)LDPPNER	ddPTM_K562_Methotrexat_30min_R1	1	FPYLDPPNER	10	0	Q8IX18-4;Q8IX18-3;Q8IX18-2;Q8IX18	Q8IX18-4	DHX40	Probable ATP-dependent RNA helicase DHX40	1	FPY(1)LDPPNER	78.149	0.027866000000000002	22756000.0	1138.8	1049.7	1460.9	1478.2	1090.3	872.69	854.34	1025.1	1318.1	1618.1	True	False	1088.739715560618	1223.1450831507495	1154.2770543797387	1348.608501053556	1233.6935607011096	1041.3249915131007	1045.9474927851327	989.0466519677886	1256.82181869972	1325.0464102904189	0.8216615713271446	0.9230960316949691	0.8711219814004465	1.017782087163251	0.9310568679860151	0.7858781273063989	0.7893666853192604	0.7464241586458945	0.9485115456629587	1.0	10.37182717620452	-8.245543987599286	23.997153058506257	0.8341457729467546	0.917008657925638	0.08184453705951733	0.08614146483758349	857.0948725691246	1293949.9634470707	0.02798825393614147	0.02788517582530749	5.6814084439202325e-09	8.245543987599286	0.08286288497888339	
FQELLAS(ph)PAYR	ddPTM_K562_Methotrexat_30min_R1	2	FQELLASPAYR	11	0	Q9NSI2-2;Q9NSI2	Q9NSI2-2	FAM207A	Protein FAM207A	1	FQELLAS(1)PAYR;FQELLAS(1)PAYR	101.45	0.0062411	23172400.0	2066.48	1925.3799999999999	2323.31	1863.85	1516.05	1458.27	1621.81	1840.02	1935.69	2381.7799999999997	True	False	1975.6400135332858	2243.5163191357433	1835.6789809097083	1700.449164313808	1715.4371482169297	1740.0600389299857	1985.5421767374319	1775.3054536667353	1845.7001944001695	1950.4165620799156	1.0129323406823783	1.1502754656386158	0.9411727815478291	0.8718389688510728	0.8795234728665322	0.8921478994591767	1.0180092885491387	0.9102186108251447	0.946310767804352	1.0	10.929566566516849	-6.841199215326774	7.459994770182588	0.9260208212075798	1.0808396445839175	0.5380009223095832	0.05513332480985179	0.1474161085248304	11.60051067633596	0.01433193823595717	0.030234718587463502	1.4414539901415918e-07	6.841199215326774	0.15481882337633768	
FQEQECPPS(ph)PEPTRK	ddPTM_K562_Methotrexat_30min_R1	2	FQEQECPPSPEPTRK	15	1	P62070-2;P62070-3;P62070;P62070-4	P62070-2	RRAS2	Ras-related protein R-Ras2	1	FQEQECPPS(0.579)PEPT(0.421)RK;FQEQECPPS(0.992)PEPT(0.008)RK	100.46	0.0020743000000000003	172898000.0	4264.0	3049.6	6400.5	4660.799999999999	3179.1	2774.0	2492.3999999999996	3693.8999999999996	4001.4	5132.3	True	False	4076.55966556944	3553.494565663069	5057.122518007747	4252.194900358826	3597.2073730394372	3310.036240196797	3051.3841456769733	3563.9834432775483	3815.3757873796108	4202.790736996178	0.9699649401252469	0.8455083272127952	1.203277258962976	1.0117550852408033	0.8559092274983067	0.787580550004388	0.726037610870405	0.8480040207342804	0.9078195956305308	1.0	12.037131909076358	-7.786893365622286	5.5890540779979965	0.835617757839944	1.0106017828313443	0.3261407412975007	0.10624457092209126	0.19548954424611573	17.32109777075265	0.03376770689022477	0.03983591572493089	1.6334529680912044e-08	7.786893365622286	0.1749840249914003	
FQPHFGQQECVS(ph)PYR	ddPTM_K562_Methotrexat_30min_R1	2	FQPHFGQQECVSPYR	15	0	P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7	P25054-2	APC	Adenomatous polyposis coli protein	1	FQPHFGQQECVS(1)PYR;FQPHFGQQECVS(1)PYR	122.29	0.00043952	29201000.0	3101.8	2280.85	3486.7	3594.8	2486.55	2606.8	2678.0	3154.2	3424.3	4129.8	True	False	2965.4485859904526	2657.7216946788467	2754.88931857474	3279.649465287054	2813.5749090721306	3110.5272065411014	3278.6096702467257	3043.2649981824216	3265.105040416855	3381.8532014197963	0.8768708779983337	0.7858773093885509	0.8146093737652955	0.9697787780706052	0.8319624600768931	0.9197700258648764	0.969471314979099	0.8998808691355302	0.9654780518107862	1.0	11.723598321648254	-7.8981868903639105	0.29545397376979854	0.9998646044377181	0.7754874715332799	0.5193884270534314	0.04889319292058918	2.5103315289324493	0.38616298343474126	0.06720867585877163	0.19572205138808282	1.2641922093451934e-08	7.8981868903639105	-0.22437713290443817	
FQPQLNPDVVAPLPTHTAHEDFTFGESRPELGS(ph)EGLGSAAHGSQPDLR	ddPTM_K562_Methotrexat_30min_R1	1	FQPQLNPDVVAPLPTHTAHEDFTFGESRPELGSEGLGSAAHGSQPDLR	48	1	Q6P2E9-2;Q6P2E9	Q6P2E9-2	EDC4	Enhancer of mRNA-decapping protein 4	1	FQPQLNPDVVAPLPT(0.025)HT(0.025)AHEDFT(0.025)FGES(0.088)RPELGS(0.298)EGLGS(0.298)AAHGS(0.241)QPDLR	42.221000000000004	0.00085277	65297000.0	1619.7	785.02	1065.5	1220.2	1256.3	851.56	1168.3	2409.6	2265.6	2782.6	True	False	1548.499927374019	914.731211941508	841.8661109190307	1113.2269604827156	1421.5254703373428	1016.111918061278	1430.321014842886	2324.853002225719	2160.2727505091325	2278.644176054703	0.6795707480994806	0.4014366181231923	0.3694592248170388	0.4885479585541005	0.6238470601402122	0.44592829751093366	0.6277070504791917	1.020279088177349	0.9480518166067852	1.0	11.153959941375781	-9.146936164684833	3.3748660634984198	0.9915307359955645	0.49727486460975756	0.8514714333103304	0.09100498113988756	0.0915951635857809	1.9302108237934688	0.049545400205332706	0.026307846048056645	7.129578174176897e-10	9.146936164684833	-0.49425587138580696	
FQSDSSSYPTVDSNS(ph)LLGQSR	ddPTM_K562_Methotrexat_30min_R1	1	FQSDSSSYPTVDSNSLLGQSR	21	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	FQSDSSSYPTVDS(0.025)NS(0.975)LLGQSR	301.16	0.0	0.0	2374.4	1397.0	1726.4	2156.2	1814.1	1448.3	1651.2	2380.6	2086.3	2556.7	True	False	2270.0242190262834	1627.8305050601093	1364.0522326519144	1967.1692937164655	2052.6859474162	1728.1634775331715	2021.523632379161	2296.8729486630746	1989.308368373589	2093.656855070461	1.0842389064515001	0.7775058750042043	0.6515166176101995	0.9395853427233477	0.9804309347278964	0.8254282325911574	0.9655467788254765	1.0970627508039155	0.9501596995495424	1.0	11.031809292329601	-8.943637836055226	5.292274993213265	1.0205429220304447	0.8700342256218372	0.23182269464600924	0.11513529108486097	0.2828618831567391	16.477036735895204	0.051786729849942065	0.034095304750203385	1.1385763640175066e-09	8.943637836055226	-0.15050869640860753	
FQSPQIQATIS(ph)PPLQPK	ddPTM_K562_Methotrexat_30min_R1	2	FQSPQIQATISPPLQPK	17	0	A0A087WYN9;Q7Z478	A0A087WYN9	DHX29	ATP-dependent RNA helicase DHX29	1	FQSPQIQAT(0.003)IS(0.997)PPLQPK;FQSPQIQAT(0.237)IS(0.763)PPLQPK	150.91	1.6990999999999999e-10	90685000.0	7655.8	5450.1	9175.2	8921.7	5786.6	5549.299999999999	5218.1	6753.4	7336.0	9282.0	True	False	7319.260198796086	6350.636389139652	7249.450906526792	8139.548412832852	6547.639327114598	6621.623686994978	6388.39175515849	6515.8790941364405	6994.950961217775	7600.939855581027	0.9629414701159468	0.8355067280892463	0.9537571727006691	1.0708607839932254	0.8614249621126738	0.8711585426022045	0.8404739251380581	0.857246500819517	0.9202744784359396	1.0	12.891962103369947														
FQSSHHPTDITSLDQYVER	ddPTM_K562_Methotrexat_30min_R1	1	FQSSHHPTDITSLDQYVER	19	0	P14625	P14625	HSP90B1	Endoplasmin	0		96.15299999999999	0.00055001	42245000.0	3142.9	2413.5	2951.2	3458.9	2890.9	2641.3	2539.7	2957.4	2981.2	3449.6	False	True	3004.7418792022017	2812.2898525143673	2331.78345053425	3155.6636072886936	3271.104021490268	3151.6938432702964	3109.292374729503	2853.386565729722	2842.604662702078	2824.844012692559	1.0636841771444114	0.9955558041004093	0.8254556499605307	1.1171107477473798	1.1579768676757296	1.1157054439498746	1.1006952457406016	1.0101041165136608	1.0062873029199904	1.0	11.4639554890649	-5.907097701687324	18.207279157139748	1.0403812111008002	2.2090730799281557	0.006510382404176562	0.08996651391484536	1913.5821750167406	396302.18018047407	0.02383946613784663	5211.635300911965	1.2385179302068591e-06	5.907097701687324	1.1686918688273555	
FRDQDLAS(ph)CDRDR	ddPTM_K562_Methotrexat_30min_R1	1	FRDQDLASCDRDR	13	2	Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2	Q9Y383	LUC7L2	Putative RNA-binding protein Luc7-like 2	1	FRDQDLAS(1)CDRDR	103.14	0.013147	84926000.0	2001.1	1555.2	1823.9	2093.6	1321.3	1595.0	1676.7	1604.4	1819.3	2034.5	True	False	1913.1340400494853	1812.1703661198865	1441.0883150682507	1910.0573385236944	1495.0741096527343	1903.2111763207956	2052.7426564983866	1547.9723426174223	1734.721140095897	1666.0323352919204	1.1483174723102045	1.0877162031806302	0.8649822002498798	1.146470748533831	0.8973860098524252	1.1423614872320693	1.2321145352432235	0.9291370340337292	1.0412289745816614	1.0	10.702200686273466	-10.413127703995553	0.00507487210284561	0.00018246854425406437	2.0723858121833887	0.019023922792968384	0.11583883619101376	69825.07708169518	161.07016092536236	33258.48865796018	32501.43549835651	3.86253382810531e-11	10.413127703995553	2.0722033436391345	
FRDQDLASCDR	ddPTM_K562_Methotrexat_30min_R1	1	FRDQDLASCDR	11	1	Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2	Q9Y383	LUC7L2	Putative RNA-binding protein Luc7-like 2	0		129.74	0.0029717	9774200.0	765.47	511.81	944.13	905.46	654.84	689.66	701.84	754.04	731.97	884.37	False	True	731.820855347898	596.3779032174759	745.9700152998445	826.0797276173411	740.9629379890994	822.9270343958623	859.2454857975962	727.5199858060594	697.9408744659997	724.2020232794869	1.010520313149513	0.8234965990799497	1.0300579000342793	1.140675807389366	1.0231439766402641	1.1363224734851025	1.1864720867618908	1.0045815427462457	0.9637378135253396	1.0	9.500248397203569	-6.947012104402531	8.092931967825944	1.0725445700063827	0.9182070582530869	0.34692518989547994	0.07959485115693112	0.2571594473321599	34.51561475654867	0.021002100522931274	0.04391337973735093	1.1297644260987475e-07	6.947012104402531	-0.1543375117532958	
FRDQDLASCDRDR	ddPTM_K562_Methotrexat_30min_R1	4	FRDQDLASCDRDR	13	2	Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2	Q9Y383	LUC7L2	Putative RNA-binding protein Luc7-like 2	0	;;;	132.5	0.00066085	253169000.0	3751.8900000000003	3303.4399999999996	3968.83	3554.76	3242.31	3023.31	2987.68	3604.84	3536.25	4021.78	False	True	3586.9614079862404	3849.277311120806	3135.8268202710233	3243.1197099209435	3668.7305959798355	3607.521869267978	3657.74329335427	3478.055733957239	3371.850509352014	3293.3966701549957	1.0891373761598626	1.1687864222379412	0.9521558240123693	0.9847340101210201	1.113965599475503	1.09538031114187	1.1106294381423927	1.0560694876130887	1.0238215578183985	1.0	11.685360571147605	-9.815963331935166	2.759751775438594	1.0022688341874704	1.0720366207674241	0.1461616682395579	0.059618222662042586	0.5541054899927716	8.029573524566125	0.06036599934729349	0.01676150016408471	1.5276950381314047e-10	9.815963331935166	0.06976778657995375	
FRDQDLASCDRDRS(ph)SR	ddPTM_K562_Methotrexat_30min_R1	1	FRDQDLASCDRDRSSR	16	3	Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2	Q9Y383	LUC7L2	Putative RNA-binding protein Luc7-like 2	1	FRDQDLASCDRDRS(0.5)S(0.5)R	67.648	0.025992	531150000.0	1370.7	1323.5	1424.9	1194.0	1298.1	1264.4	1154.4	1168.5	1512.3	1469.6	True	False	1310.4456692298384	1542.1858793464962	1125.8329624106304	1089.3238738045918	1468.8229030047798	1508.7274052288499	1413.303586009268	1127.403192687895	1441.9935030874663	1203.441199284839	1.0889154119109334	1.2814800426169228	0.9355114010386811	0.905174157617287	1.2205190447839473	1.2536777086619864	1.1743852436239863	0.936816184586226	1.1982251429852908	1.0	10.232949937423742	-12.307194026240376	3.124875625599428	0.9992635327947437	1.108578729279869	0.05829002513069792	0.13306424308875534	73784076.97575517	106282444.23503181	520116.897448286	0.03582251559539833	4.929535218855622e-13	12.307194026240376	0.10931519648512533	
FRDWLDCS(ph)SMEIK	ddPTM_K562_Methotrexat_30min_R1	1	FRDWLDCSSMEIK	13	1	O75486;A0A1B0GVT7;A0A6I8PRV1;O75486-4	O75486	SUPT3H	Transcription initiation protein SPT3 homolog	1	FRDWLDCS(0.969)S(0.031)MEIK	77.068	0.029812	39892000.0	2396.4	2114.3	1838.2	2268.4	2296.7	2205.6	2112.4	2346.3	2138.7	2431.3	True	False	2291.0571253683397	2463.6521380448025	1452.386940489312	2069.5328939182027	2598.7563063947887	2631.8009846352024	2586.1594725277	2263.7792991045008	2039.272303810859	1990.9680102213063	1.1507252319507018	1.237414225340042	0.729487833572912	1.0394606459237703	1.3052727583030947	1.3218700507109928	1.2989457687169144	1.1370244461400814	1.0242617125647255	1.0	10.959254325476481														
FRIDELEPR	ddPTM_K562_Methotrexat_30min_R1	3	FRIDELEPR	9	1	F5H6X6;Q14697;Q14697-2	F5H6X6	GANAB	Neutral alpha-glucosidase AB	0	;;	104.42	0.020138	24320200.0	7065.9	5638.6	7000.0	7240.7	6061.0	5558.099999999999	5628.8	7093.4	6315.0	8326.2	False	True	6755.291496469765	6570.282810187496	5530.795660659985	6605.919072911981	6858.127736778341	6632.124162450549	6891.201684796402	6843.921101422606	6021.417028365631	6818.244497472396	0.9907669780651063	0.9636326201888444	0.8111759064536798	0.9688592240071288	1.0058494879907476	0.9727026018074236	1.01070028910683	1.0037658672932201	0.8831330455512181	1.0	12.73518461910129	-7.499114265841289	24.871477552039995	0.9813787114874736	0.9200328568994315	0.17753072907144185	0.0554870143533779	1181.1878134571434	1236210.495173112	0.015817766258456364	0.0233005229864114	3.1687336379160196e-08	7.499114265841289	-0.06134585458804209	
FS(ph)EFMRQY(ph)LVLS(ph)MQSS(ph)QRRR	ddPTM_K562_Methotrexat_30min_R1	1	FSEFMRQYLVLSMQSSQRRR	20	3	Q13519-2;Q13519	Q13519-2	PNOC	Prepronociceptin;Neuropeptide 1;Nociceptin;Neuropeptide 2	4	FS(0.999)EFMRQY(0.999)LVLS(0.662)MQS(0.418)S(0.922)QRRR	43.115	0.02998	7263100.0	188.45	127.57	160.91	132.46	202.01	211.97	288.18	137.7	213.64	140.27	True	False	180.1659636436586	148.6487741807574	127.13718996525691	120.84743745741719	228.5778558169598	252.93020253587414	352.8117008109416	132.857012950897	203.70792303088416	114.86574375590939	1.568491682137302	1.2941088380243044	1.1068329495643578	1.052075523179643	1.989956695032503	2.2019637384088404	3.071513658246703	1.1566286745439023	1.7734436427257643	1.0	6.84380479905414	-7.769306203039303	24.92089547919807	1.9505313800770854	1.247533468952492	0.2179858714271352	0.5522417507745732	236.33365317794926	748667.1695140557	0.17402946566662178	0.20090849904572888	1.700958809957326e-08	7.769306203039303	-0.7029979111245934	
FS(ph)PVLGR	ddPTM_K562_Methotrexat_30min_R1	5	FSPVLGR	7	0	F8VZ44;Q9NRG9-2;Q9NRG9	F8VZ44	AAAS	Aladin	1	FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR	82.75	0.030022000000000004	152510700.0	27455.3	23101.4	33474.0	28122.3	24255.800000000003	22441.2	21792.9	27724.0	27257.200000000004	29755.1	True	False	26248.397886047987	26918.513693339737	26448.264849276053	25656.86162168749	27445.862853942934	26777.64429470237	26680.51257756528	26748.931205887206	25990.018721388387	24366.163057185848	1.0772478959631293	1.1047497970921267	1.0854505400461962	1.052970940130067	1.1263924808156798	1.0989684437330953	1.094982107562352	1.0977900436399917	1.066643880712423	1.0	14.57259146712329	-10.133539154482715	2.961364859499012	1.0000343494964097	1.092555485234732	0.705947727143085	0.01799236522547299	0.2961355406994164	5.040172887330214	0.017429854660009875	0.004656761774637494	7.352937009596999e-11	10.133539154482715	0.09252113573832221	
FSALSYGASALPGPDMS(ph)MK	ddPTM_K562_Methotrexat_30min_R1	1	FSALSYGASALPGPDMSMK	19	0	Q86Y26-3	Q86Y26-3			1	FS(0.009)ALS(0.001)YGASALPGPDMS(0.99)MK	42.059	0.032966	0.0	0.0	0.0	135.65	190.64	56.373999999999995	132.22	130.17	0.0	143.85	66.535	True	False	0.0	0.0	107.17891876693244	173.92688718769452	63.788169119475704	157.76964371983436	159.3639360627394	0.0	137.16244489792493	54.48486676266793	0.0	0.0	1.9671318869842507	3.1922054236694244	1.1707502084447097	2.895659897766977	2.9249210933545458	0.0	2.5174411363690115	1.0	5.767783670131187	-6.763625619247485	8.602494578696142	2.0080795254041104	6.470680793378713e-14	0.40361978306945634	0.950816674220967	0.09495881570419078	72.66576505205714	0.24365061853308292	0.5650539091517188	1.7233535406280977e-07	6.763625619247485	-2.0080795254040456	
FSDS(ph)EGEETVPEPR	ddPTM_K562_Methotrexat_30min_R1	2	FSDSEGEETVPEPR	14	0	A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286	A0A1B0GWH8	CLN3	Battenin	1	FS(0.09)DS(0.909)EGEETVPEPR;FS(0.286)DS(0.71)EGEET(0.004)VPEPR	205.26	5.9226e-13	31592000.0	1651.47	1295.7	1679.83	1474.8600000000001	1112.41	1111.98	989.71	1482.1799999999998	1430.4499999999998	1728.3200000000002	True	False	1578.8733562143443	1509.7924018656997	1327.256639235209	1345.5613136678724	1258.7114132436234	1326.8543973951096	1211.6776612172844	1430.0508892923785	1363.9486917221882	1415.304500236781	1.1155714942969504	1.0667615354950901	0.9377887507692927	0.9507221332531335	0.8893573171236582	0.9375045420777834	0.856125067796061	1.0104192342023433	0.9637139509511904	1.0	10.46689676437702	-6.6772947975991865	3.338194666070907	0.937829507714943	1.1074991226125013	0.6499945361721091	0.04386909434633067	0.13764443140550356	2.9492472976249595	0.011647225528569255	0.03664569525329887	2.1023508867680056e-07	6.6772947975991865	0.16966961489755827	
FSEQGGT(ph)PQNVATSSSLTAHLR	ddPTM_K562_Methotrexat_30min_R1	1	FSEQGGTPQNVATSSSLTAHLR	22	0	Q9H1A4	Q9H1A4	ANAPC1	Anaphase-promoting complex subunit 1	1	FS(0.001)EQGGT(0.999)PQNVATSSSLTAHLR	173.03	2.2595e-17	9266900.0	1237.3	885.92	1340.8	1442.6	1006.7	1081.0	829.62	1354.5	1005.3	1151.4	True	False	1182.9097735011876	1032.3032219347547	1059.3844031161307	1316.1294977809912	1139.0986953662366	1289.8879508481384	1015.6834035213175	1306.8614672620909	958.5638224253316	942.8703027058815	1.2545837641788404	1.094851772266255	1.1235738362698167	1.3958754390756796	1.208118117727552	1.3680438838155935	1.0772249381558359	1.386045846933152	1.0166444098137488	1.0	9.880915523228929	-9.853345046744968	9.150164664062764	1.0031512574611074	1.2329493014132473	0.4042210044779023	0.11166528826253598	0.3116176976413582	27.860323425414382	0.104188188545127	0.02693445226998	1.4016996124186504e-10	9.853345046744968	0.22979804395213987	
FSGEEGEIEDDES(ph)GTENREEKDNIQPTTE	ddPTM_K562_Methotrexat_30min_R1	1	FSGEEGEIEDDESGTENREEKDNIQPTTE	29	2	Q9Y2W1	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	1	FS(0.001)GEEGEIEDDES(0.755)GT(0.241)ENREEKDNIQPT(0.002)T(0.002)E	56.07899999999999	0.010989	11613000.0	894.38	935.4	1500.0	1118.5	1006.9	652.06	766.02	997.06	1146.5	1464.0	True	False	855.0641261003736	1089.9589509185575	1185.1704987128542	1020.4428415832786	1139.3249988718226	778.061366540275	937.8194845415961	961.9928346610122	1093.1994652448448	1198.8554135499492	0.7132337364757191	0.9091663086302154	0.988585016439495	0.8511809097659488	0.9503439580742684	0.6490035059660326	0.7822623762148302	0.8024260672206004	0.9118693154229125	1.0	10.227441959483798	-6.249080183123913	23.636188311383158	0.8611973177054382	0.7132335362342792	0.1732043616677862	0.10154848160657394	1829.4106979309195	3498497.731502261	0.02632662278944244	0.4166427367682136	5.635336018762308e-07	6.249080183123913	-0.14796378147115896	
FSKEEPVS(ph)SGPEEAVGK	ddPTM_K562_Methotrexat_30min_R1	1	FSKEEPVSSGPEEAVGK	17	1	O00567	O00567	NOP56	Nucleolar protein 56	1	FSKEEPVS(0.604)S(0.396)GPEEAVGK	103.5	0.025748000000000004	0.0	2433.6	1737.9	4193.3	2644.8	1382.2	1519.5	1334.3	1766.2	1944.6	3107.3	True	False	2326.6218579103615	2025.0584357508694	3313.183634835075	2412.934490316905	1563.9835271036186	1813.121869855456	1633.550740481778	1704.0817449083092	1854.195970444941	2544.5378596473756	0.9143593006836954	0.7958452762151096	1.3020767689792672	0.9482800506066322	0.6146434493689777	0.7125544872445797	0.6419832718496697	0.6697018629325729	0.7286965542347628	1.0	11.313187941695091	-7.660784220965573	5.991316503407333	0.70716728349595	1.0047940444341166	0.4042759404382271	0.1554106610821816	0.1943517252230044	9.838067156652711	0.0456812561419618	0.059034792565834514	2.1838146697589743e-08	7.660784220965573	0.29762676093816653	
FSLS(ph)PSLGPQASR	ddPTM_K562_Methotrexat_30min_R1	2	FSLSPSLGPQASR	13	0	Q9NYF3	Q9NYF3	FAM53C	Protein FAM53C	1	FS(0.005)LS(0.884)PS(0.108)LGPQAS(0.002)R;FSLS(0.786)PS(0.214)LGPQASR	92.15100000000001	0.014182	44155000.0	3174.7	3322.5	4650.1	3970.9	3346.7999999999997	3207.5	3196.0	3783.4	3838.2999999999997	4543.6	True	False	3035.143989278447	3871.4866521562017	3674.1075573764306	3622.777362219974	3786.9628624731504	3827.303979967998	3912.784356276524	3650.3356775484654	3659.858270780014	3720.7100116158094	0.8157432263742482	1.0405236205105148	0.9874748491299001	0.9736790426853755	1.0178065075349876	1.0286488245575198	1.0516230354048208	0.9810857782929494	0.9836451266973723	1.0	11.861362237311521	-6.255346402059279	24.972469315389986	1.0073055757593021	0.8157431414011403	0.8362418717801771	0.02541249639161781	272.9560412208139	1118697.2722492807	0.006685488575458514	0.06018649627615498	5.554610335811866e-07	6.255346402059279	-0.19156243435816178	
FSPPS(ph)PLPQAVFSTSSR	ddPTM_K562_Methotrexat_30min_R1	2	FSPPSPLPQAVFSTSSR	17	0	A0A1X7SBS4;Q99594	A0A1X7SBS4	TEAD3	Transcriptional enhancer factor TEF-5	1	FSPPS(0.872)PLPQAVFS(0.036)T(0.058)S(0.021)S(0.013)R;FSPPS(0.997)PLPQAVFS(0.001)T(0.001)SS(0.001)R	121.51	0.00023808	16116500.0	1791.89	1207.62	1764.5500000000002	1866.04	1442.39	1303.25	1316.01	1746.75	2030.92	2410.9	True	False	1713.1206611485045	1407.1586789697126	1394.1950690025121	1702.4471704140035	1632.0895671096719	1555.084617893466	1611.1587423978317	1685.315812432675	1936.5029724858784	1974.2626479013459	0.8677268259973225	0.7127515077416531	0.7061852031109187	0.8623205084813391	0.8266831005715444	0.7876786908502428	0.8160812565189864	0.8536431635497824	0.9808740364633823	1.0	10.947098217525602	-9.662670931563326	1.870459161711395	1.0065937588383638	0.7921751372056671	0.690192895596069	0.05115444040643074	0.1986884959212663	1.2828196257156794	0.04933716902114104	0.01497031035918915	2.1743480759503908e-10	9.662670931563326	-0.21441862163269665	
FSS(ph)PIVK	ddPTM_K562_Methotrexat_30min_R1	1	FSSPIVK	7	0	P49790-2;P49790;P49790-3	P49790-2	NUP153	Nuclear pore complex protein Nup153	1	FS(0.003)S(0.997)PIVK	91.069	0.017319	22383000.0	8951.2	6212.5	13538.0	9867.0	6400.1	5856.6	5858.0	8082.1	8078.1	10214.0	True	False	8557.715965864249	7239.01003055542	10696.558807716412	9001.975429505785	7241.825330499107	6988.305062846631	7171.80561923275	7797.847962022113	7702.550894194834	8364.145624316376	1.0231428708014267	0.8654811089742455	1.2788585096628649	1.0762576160002644	0.8658177004290263	0.8355073401077715	0.8574462881639416	0.9322946194710058	0.9209010985894192	1.0	13.03000246491217	-7.758660929279317	24.995156963597932	0.8930574599442486	1.0625400220335681	0.3610258441358819	0.10316972998507437	80.71033974583051	726069.740479275	0.03210872382320712	0.03960560031596906	1.7431673012742832e-08	7.758660929279317	0.16948256208931956	
FSSVSS(ph)PQPR	ddPTM_K562_Methotrexat_30min_R1	2	FSSVSSPQPR	10	0	Q9P206;Q9P206-3;Q9P206-2	Q9P206	KIAA1522	Uncharacterized protein KIAA1522	1	FSS(0.002)VS(0.045)S(0.953)PQPR;FS(0.001)S(0.001)VS(0.024)S(0.974)PQPR	139.31	9.144e-05	113228000.0	6396.2	5575.9	6949.6	7799.6	5966.1	5590.0	5300.799999999999	5820.0	6021.8	6939.9	True	False	6115.030706593634	6497.222700905268	5490.973931903236	7115.821177660207	6750.74672337787	6670.188385976961	6489.63933534124	5615.307301192598	5741.847832369301	5683.01686099405	1.0760183994111918	1.143270002505113	0.9662075735849176	1.2521203705201636	1.1878808190262973	1.1737055421669538	1.1419356116789876	0.9880856310199987	1.010352067011985	1.0	12.472441280402625	-9.259956374994044	24.813628066180694	0.9994141288483284	1.1364076675146577	0.4314729831862376	0.07097249464807916	116.85578122912162	1955274.8816658303	0.03687171997360063	0.019823519840900257	5.495960781694875e-10	9.259956374994044	0.13699353866632935	
FSTLTDDPS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	FSTLTDDPSPR	11	0	Q14C86-4;Q14C86-2;Q14C86-6;Q14C86-5;Q14C86	Q14C86-4	GAPVD1	GTPase-activating protein and VPS9 domain-containing protein 1	1	FSTLTDDPS(0.999)PR	86.463	0.021719	18961000.0	2077.7	1938.0	2517.9	2432.9	2134.3	2019.3	1861.3	2302.0	2177.8	2719.8	True	False	1986.3667957677344	2258.221559632419	1989.4271991393969	2219.611434320929	2414.997859859102	2409.501146297545	2278.743905612483	2221.0373552139786	2076.5545533451573	2227.217864599146	0.8918601216972727	1.0139203692310779	0.8932342142008874	0.9965847839139949	1.0843114624054762	1.0818434894025089	1.0231347107224333	0.9972250090647149	0.9323535817269025	1.0	11.121026972919534	-7.51079042249703	24.226517932686725	1.024532010467891	0.9417319418586719	0.35519134236210315	0.05172513180969776	456.1939438393762	914270.46668348	0.0154596337963411	0.02161456227334105	3.084676163418502e-08	7.51079042249703	-0.08280006860921907	
FSTYSQSPPDT(ph)PSLR	ddPTM_K562_Methotrexat_30min_R1	1	FSTYSQSPPDTPSLR	15	0	H3BMG9;H3BSV5;A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4	H3BMG9	FAM65A	Protein FAM65A	1	FS(0.047)T(0.035)Y(0.004)S(0.005)QS(0.117)PPDT(0.728)PS(0.063)LR	98.421	0.009149299999999999	23258000.0	1232.7	1040.9	1275.3	1313.4	1309.8	1255.5	872.05	1357.6	1305.1	1521.7	True	False	1178.5119839933036	1212.891032725174	1007.6319580056684	1198.2562611850508	1482.0616580815492	1498.1076061885638	1067.6294111048005	1309.8524385049948	1244.4261858622299	1246.1053844255168	0.9457562728826701	0.9733454713257215	0.8086249931984764	0.9616010621264384	1.1893549908419774	1.2022318697220185	0.8567729699659409	1.0511570328450726	0.9986524425748621	1.0	10.283210368400335	-7.532914863512121	24.989054127097255	1.0525284617714548	0.9105626299984324	0.28903595135870996	0.10034347362958222	272.44683993009306	678365.1255426824	0.03117713024439058	0.0402952074048867	2.931467856319611e-08	7.532914863512121	-0.14196583177302236	
FSVPSGSS(ph)PGSQSDAEPR	ddPTM_K562_Methotrexat_30min_R1	4	FSVPSGSSPGSQSDAEPR	18	0	Q8TEP8;K7ELX0	Q8TEP8	CEP192	Centrosomal protein of 192 kDa	1	FSVPSGS(0.004)S(0.893)PGS(0.099)QS(0.003)DAEPR;FSVPS(0.002)GS(0.195)S(0.654)PGS(0.147)QS(0.001)DAEPR;FSVPSGS(0.003)S(0.929)PGS(0.066)QS(0.001)DAEPR;FSVPSGS(0.042)S(0.914)PGS(0.042)QS(0.003)DAEPR	208.59	2.0240999999999994e-121	66776000.0	10770.0	9094.76	13018.7	10617.3	9888.800000000001	9316.5	8900.66	11045.3	11124.8	12826.7	True	False	10296.563695633871	10597.514505512145	10286.252781062029	9686.497793421684	11189.3505301854	11116.781770653726	10896.859577138994	10656.830538464363	10607.610476193508	10503.660336735746	0.9802833836526901	1.0089353773606093	0.9793017339952101	0.9222021164892301	1.0652810707379319	1.0583721687737402	1.037434496908479	1.0145825547302703	1.009896563305099	1.0	13.358604548338619	-7.775143155282795	24.99999573025804	1.0333544853145917	0.9757431981732186	0.5124145606154396	0.027710423129028803	206.12316244852806	376032.09445761325	0.00911855205283892	0.010395001257675788	1.678250729815346e-08	7.775143155282795	-0.05761128714137309	
FSVS(ph)PVVR	ddPTM_K562_Methotrexat_30min_R1	2	FSVSPVVR	8	0	P13639	P13639	EEF2	Elongation factor 2	1	FS(0.024)VS(0.976)PVVR;FS(0.185)VS(0.815)PVVR	86.882	0.024728999999999998	49210000.0	8584.0	7817.5	10503.599999999999	9501.2	8142.4	6937.0	7560.3	8997.2	8800.4	9106.7	True	False	8206.657638191384	9109.209000220044	8299.037900186888	8668.24454756464	9213.268319409995	8277.477072186433	9255.88972739593	8680.763376338497	8391.271324850177	7457.388384272756	1.1004734117776134	1.2215012187686096	1.1128611616486446	1.1623700015203065	1.2354550741705097	1.109969958067787	1.241170400473726	1.1640487163905495	1.1252292213379862	1.0	12.86445476437494	-10.161570473205842	2.467703016623475	1.0001651008142305	1.1707940612971284	0.5192435412382975	0.04880879176874586	0.4734184617077223	5.306605024687599	0.04394216504043474	0.011920364410869688	6.893337255297564e-11	10.161570473205842	0.17062896048289788	
FT(ph)LLLS(ph)NY(ph)Y(ph)SR	ddPTM_K562_Methotrexat_30min_R1	1	FTLLLSNYYSR	11	0	Q86U02	Q86U02	LINC00596	Putative uncharacterized protein encoded by LINC00596	4	FT(0.999)LLLS(0.998)NY(0.988)Y(0.997)S(0.018)R	51.358999999999995	0.032472	37542000.0	62.165	0.0	0.0	0.0	0.0	59.672	0.0	0.0	66.53699999999999	0.0	True	False	59.432301034269244	0.0	0.0	0.0	0.0	71.20276947549505	0.0	0.0	63.44370939293175	0.0											0.0														
FT(ph)VREFY(ph)Y(ph)DEK	ddPTM_K562_Methotrexat_30min_R1	1	FTVREFYYDEK	11	1	A0A3B3IRZ7;A0A0U1RR16;Q8NEY4-2;Q8NEY4	A0A3B3IRZ7	ATP6V1C2	V-type proton ATPase subunit C 2	3	FT(1)VREFY(1)Y(1)DEK	88.803	0.0059849	32841000.0	3529.7	4561.5	5651.1	4783.4	4389.7	4950.2	4205.5	3670.6	3861.8	3329.6	True	False	3374.5386143434425	5315.210342757114	4465.011336850806	4364.046748707603	4967.02249235042	5906.75609092364	5148.6904287612415	3541.502917484113	3682.265760909328	2726.577175516333	1.2376464692235989	1.9494076274406462	1.637588466941254	1.6005586740383322	1.82170618053744	2.166363066471821	1.8883347498815	1.2988823310359652	1.3505085401486996	1.0	11.412875276047728	-9.339430291233821	5.1246329911839155	1.2269309110618563	1.7718402571265652	0.5040536615167748	0.24603242595223895	0.19909623157691486	9.313985817454471	0.14309606456892865	0.06666475477360316	4.576881926900622e-10	9.339430291233821	0.544909346064709	
FTDEEVDELYR	ddPTM_K562_Methotrexat_30min_R1	1	FTDEEVDELYR	11	0	J3QRS3;P19105;O14950	J3QRS3	MYL12A;MYL12B	Myosin regulatory light chain 12A;Myosin regulatory light chain 12B	0		144.65	1.8044e-06	10094000.0	1387.8	1349.3	1742.4	1326.7	1211.7	1086.5	1087.9	1642.0	1478.7	1592.8	False	True	1326.793973704799	1572.2488908214787	1376.6940513048519	1210.390270834632	1371.0597885917039	1296.4507480078653	1331.8892682081455	1584.2499293055407	1409.9555597536432	1304.3284854524309	1.0172237963848314	1.2054086898793095	1.055481089817125	0.9279796342213483	1.0511614243524905	0.9939603117370905	1.0211302467615393	1.2146096224801943	1.0809819577501396	1.0	10.349091532032896	-11.36371693506538	9.275552930638998	1.000020605186302	1.0639276864529803	0.04820863660750352	0.08404598255364588	0.0	0.0	0.08572495070178594	0.02079135449966649	4.327958272649725e-12	11.36371693506538	0.06390708126667821	
FTDKDQQPS(ph)GS(ph)EGEDDDAEAALKK	ddPTM_K562_Methotrexat_30min_R1	1	FTDKDQQPSGSEGEDDDAEAALKK	24	2	H3BNW0;Q9NXG2	H3BNW0	THUMPD1	THUMP domain-containing protein 1	2	FT(0.002)DKDQQPS(0.998)GS(1)EGEDDDAEAALKK	78.354	0.0018678000000000002	11381000.0	5243.4	2961.2	12786.0	5532.6	3901.0	2817.3	2343.1	4024.7	4551.3	8884.6	True	False	5012.906414269884	3450.48796820615	10102.393331028368	5047.565547915647	4414.049876451466	3361.7033523815567	2868.599820147534	3883.1490197783232	4339.711056405462	7275.512846465759	0.6890107295604617	0.47426044610481316	1.3885472466639694	0.6937745358208821	0.6066994821671833	0.462057235458608	0.39428145900958994	0.533728563432425	0.5964818079475418	1.0	12.828833230961413	-7.518978342523291	23.821124915232165	0.5668311192190917	0.851003068629214	0.1490367125024088	0.2625035095049878	146.32828292991547	893683.8357567685	0.07693937391165585	0.10185130729055637	3.027064378537909e-08	7.518978342523291	0.28417194941012236	
FTGS(ph)FDDDPDPHRDPYGEEVDRR	ddPTM_K562_Methotrexat_30min_R1	1	FTGSFDDDPDPHRDPYGEEVDRR	23	2	F1T0I1;O15027-2;O15027-4;O15027-3;O15027;O15027-5;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5	F1T0I1	SEC16A	Protein transport protein Sec16A	1	FT(0.184)GS(0.781)FDDDPDPHRDPY(0.035)GEEVDRR	51.398	0.021049000000000002	55827000.0	814.91	581.54	1003.9	940.91	520.68	607.89	762.02	1084.2	784.87	1049.8	True	False	779.0875321456821	677.6296005101332	793.1951091052227	858.4218811570164	589.1585464421294	725.3561391684318	932.9223827189721	1046.0680714695902	748.3815650124045	859.671047230011	0.9062623833337401	0.7882429013906626	0.9226728196337614	0.9985469255047967	0.6853302182741718	0.8437601120866383	1.0852085640489906	1.2168236616089123	0.8705441080327203	1.0	9.74764090852317	-8.759421630733563	24.93623944752041	1.0612127458285239	0.8558744761789324	0.39243114935199286	0.11227404934129444	49.71247455633091	614380.8612583475	0.044358939712985324	0.03260998709659933	1.7401166770770647e-09	8.759421630733563	-0.20533826964959145	
FTGSFDDDPDPHRDPYGEEVDRR	ddPTM_K562_Methotrexat_30min_R1	1	FTGSFDDDPDPHRDPYGEEVDRR	23	2	F1T0I1;O15027-2;O15027-4;O15027-3;O15027;O15027-5;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5	F1T0I1	SEC16A	Protein transport protein Sec16A	0		42.348	0.028344	26347000.0	2596.9	2011.2	2793.3	2435.4	2523.4	2141.4	2308.9	2728.9	2904.2	3053.6	False	True	2482.7433854402598	2343.5166154451626	2207.0245027030783	2221.892263202429	2855.271329976321	2555.195243243481	2826.7295995641007	2632.923040244757	2769.1843758954037	2500.5634500110127	0.9928735803241967	0.9371954210699359	0.8826108782376061	0.8885566423809976	1.141851181566197	1.0218477932372512	1.130437061915646	1.0529319063002225	1.107424159096306	1.0	11.28803749752795	-7.754906945408631	24.999969731608594	1.0784346565667433	0.923108257346091	0.6805213413773191	0.050468096603324394	85.8819004921437	328672.9670545819	0.014543203927199558	0.018331849840727065	1.7583003177777757e-08	7.754906945408631	-0.15532639922065228	
FTNS(ph)NTPNSY(ph)NHMDPDKLNGLW	ddPTM_K562_Methotrexat_30min_R1	1	FTNSNTPNSYNHMDPDKLNGLW	22	1	H0Y4R4	H0Y4R4	TOR1AIP1		2	FT(0.21)NS(0.749)NT(0.036)PNS(0.024)Y(0.982)NHMDPDKLNGLW	45.068999999999996	0.028692000000000002	22379000.0	3307.7	2943.5	3933.6	3441.6	3358.8	3180.7	3083.2	4312.1	3864.8	3891.0	True	False	3162.297468528151	3429.8633440547083	3107.991115824589	3139.8802714287103	3800.541072808297	3795.3252592624194	3774.686084878527	4160.440998878454	3685.126291564132	3186.3021954391056	0.9924662742456396	1.0764400655293267	0.9754225824133657	0.9854307842875532	1.1927748341787596	1.1911378853817047	1.184660416165685	1.3057270603000986	1.1565526637238133	1.0	11.63766738617261	-7.765462364057425	24.98690713860127	1.1887042218226036	1.0100815416869007	0.5258401448973689	0.07543133301044447	72.09433270937392	447780.83157383715	0.022162224384805185	0.026054565987682552	1.7160804191383936e-08	7.765462364057425	-0.17862268013570293	
FTPVASKFS(ph)PGAPGGSGSQPNQK	ddPTM_K562_Methotrexat_30min_R1	2	FTPVASKFSPGAPGGSGSQPNQK	23	1	Q15942-2;Q15942;H0Y2Y8;H7C3D3	Q15942-2	ZYX	Zyxin	1	FT(0.016)PVAS(0.049)KFS(0.927)PGAPGGS(0.004)GS(0.004)QPNQK;FT(0.002)PVAS(0.017)KFS(0.972)PGAPGGS(0.006)GS(0.003)QPNQK	60.343	0.0087049	38996000.0	3961.0	2809.0	6421.4	4374.2	2490.5	2403.4	2402.6	3305.5	3222.7	4481.9	True	False	3786.8791827674804	3273.13950516381	5073.635893623147	3990.7206773836187	2818.0444033074523	2867.823035215927	2941.4442097590654	3189.243691424764	3072.8773804139223	3670.184479501037	1.0317953236188029	0.8918187964243134	1.3823926077723783	1.0873351733878398	0.7678209144654675	0.7813838926172476	0.8014431498437801	0.868960050710678	0.8372542027728485	1.0	11.84163686570668	-7.749380913624876	21.718626547262936	0.8311187260944727	1.1038746459290685	0.48505272698194035	0.12859247183360145	38.83120662833783	69937.06761485289	0.03882883800053221	0.04958261017413852	1.7808161532969245e-08	7.749380913624876	0.2727559198345958	
FTS(ph)GAFLSPSVSVQECR	ddPTM_K562_Methotrexat_30min_R1	1	FTSGAFLSPSVSVQECR	17	0	P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;H7C3P6	P52948-6	NUP98	Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96	1	FT(0.001)S(0.92)GAFLS(0.065)PS(0.006)VS(0.008)VQECR	139.0	1.2142e-06	8430100.0	1873.1	1303.6	2354.0	2285.2	1656.5	1762.7	1542.9	2079.2	2008.7	2209.8	True	False	1790.7607667866112	1518.9977425886589	1859.9275693133732	2084.8600640018867	1874.3587850145727	2103.316827900105	1888.9346005316163	2006.0733574982212	1915.315975435954	1809.5838066001902	0.9895981386742494	0.8394182889172298	1.0278206306497448	1.1521213089980509	1.0357955117514455	1.1623207613974922	1.0438503006282471	1.1085827305601235	1.0584289981210715	1.0	10.821442208933288	-6.952096151192641	6.363622581550922	1.0852232531939467	0.9166009733246261	0.5532689530287345	0.05868767625840254	0.1195973997877824	11.290528807134498	0.014013004560269791	0.02944321723239357	1.1166160057569606e-07	6.952096151192641	-0.16862227986932066	
FTS(ph)MHK	ddPTM_K562_Methotrexat_30min_R1	1	FTSMHK	6	0	H0YJ83;A0A087WWY9;Q8TB24-4;Q8TB24	H0YJ83	RIN3	Ras and Rab interactor 3	1	FTS(1)MHK	115.46	0.029195	16007000.0	4153.8	3124.5	3203.1	5357.5	3682.2	3037.1	4084.1	4938.7	4969.6	6261.1	True	False	3971.203925619682	3640.7705175807505	2530.8130829514294	4887.816293055357	4166.473841340572	3623.976591601188	5000.063388444605	4765.003121718191	4738.564380707183	5127.154118700539	0.7745435057501591	0.7100957828245452	0.4936097149334095	0.9533195569892795	0.8126289448066274	0.7068202959578039	0.9752122274241009	0.92936607938867	0.9242094680602574	1.0	12.32394254946247	-8.426719174843514	0.5524736093212459	0.990492309037496	0.6770321247740158	0.44938516338455226	0.11253223500141409	0.8677415386106968	0.5665690699757714	0.1023427074338125	0.10657035970734148	3.743525753182556e-09	8.426719174843514	-0.3134601842634802	
FTSGAFLS(ph)PSVSVQECR	ddPTM_K562_Methotrexat_30min_R1	1	FTSGAFLSPSVSVQECR	17	0	P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;H7C3P6	P52948-6	NUP98	Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96	1	FTSGAFLS(0.973)PS(0.025)VS(0.002)VQECR	99.238	0.0018620999999999998	9618500.0	740.85	752.82	1104.4	1141.8	774.57	1032.3	805.03	841.03	921.08	789.6	True	False	708.283121068743	877.2107092479251	872.601532518984	1041.7001667588631	876.4395316080514	1231.7773650883748	985.578470066737	811.4504981996577	878.2591918427573	646.5957886195628	1.095403238831602	1.3566601030927052	1.349531728905825	1.611053126378724	1.355467429627386	1.9050191584423002	1.524257484217271	1.254957907987691	1.3582816456596167	1.0	9.336720300768791	-10.15046188530214	1.3488460688155595	1.0062786016186256	1.4571749028760734	0.28733138712002104	0.20564594826335464	0.8530028966235325	3.183519265154247	0.20576134036012023	0.06179356815531878	7.071932628900274e-11	10.15046188530214	0.45089630125744784	
FVAFSGEGQS(ph)LR	ddPTM_K562_Methotrexat_30min_R1	3	FVAFSGEGQSLR	12	0	Q92890;Q92890-1	Q92890	UFD1L	Ubiquitin fusion degradation protein 1 homolog	1	FVAFSGEGQS(1)LR;FVAFSGEGQS(1)LR;FVAFSGEGQS(1)LR	131.79	0.00012851	99295000.0	4089.3	2653.46	3174.1400000000003	3506.14	3731.7	3204.0499999999997	2941.49	4948.6	4151.0	5130.7	True	False	3909.5392683895666	3091.899163891767	2507.9313911896134	3198.762149833524	4222.483958973065	3823.187316295078	3601.1940100575193	4774.55493310682	3958.0209160325776	4201.480512500496	0.9305146737578983	0.7359070581649882	0.5969161070074861	0.761341660473344	1.00499905840574	0.9099619300672948	0.8571250061360589	1.1363982098456196	0.9420538556007667	1.0	12.036682077236911	-7.73458523883002	7.946397772253549	0.9727972671661299	0.7425487892417748	0.5242393279119026	0.10184131832000799	0.1642922091442579	39.08702778193775	0.031397334084471124	0.03984829921357979	1.842530820582956e-08	7.73458523883002	-0.2302484779243551	
FVDGEWYR	ddPTM_K562_Methotrexat_30min_R1	1	FVDGEWYR	8	0	Q7KZF4	Q7KZF4	SND1	Staphylococcal nuclease domain-containing protein 1	0		126.28	3.098e-10	0.0	2638.3	2347.9	2559.1	2993.6	2698.2	2221.8	2133.5	2785.7	2905.4	2905.6	False	True	2522.3234910112214	2735.8505675237143	2021.9798821707093	2731.15573586384	3053.0605938583285	2651.131405360218	2611.9916846420406	2687.725352050208	2770.3285881573242	2379.3676841603356	1.0600814274324037	1.1498225287905344	0.8497971522565474	1.1478493862236547	1.2831394719625837	1.114216782470838	1.0977671513445795	1.129596476384309	1.164312941879328	1.0	11.216362513603308														
FVEWLQNAEEES(ph)ESEGEEN	ddPTM_K562_Methotrexat_30min_R1	1	FVEWLQNAEEESESEGEEN	19	0	B5MCH7;Q9Y6E2;E9PFD4;B5MCE7	B5MCH7	BZW2	Basic leucine zipper and W2 domain-containing protein 2	1	FVEWLQNAEEES(0.5)ES(0.5)EGEEN	94.725	0.0088867	0.0	270.35	376.91	437.3	268.34	192.01	210.41	253.37	329.62	272.78	333.72	True	False	258.46573770794976	439.18797112541586	345.51670605808755	244.81504882472694	217.26268053766864	251.06875461420623	310.1946721995564	318.02707776960534	260.09851733928383	273.2800741870828	0.9457906452813994	1.6070984041988932	1.2643318657091436	0.8958393675534895	0.795018375137495	0.9187232379127975	1.1350797277199307	1.1637404546073473	0.951765393481359	1.0	8.094236461492875	-7.18817147942374	6.115977817456102	0.9834048689799177	1.3110180086639578	0.3503272124785066	0.18065522119077143	0.243121008144054	16.05753879570008	0.04995971060676473	0.08739708259523384	6.483783734149647e-08	7.18817147942374	0.32761313968404004	
FVHGPS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	FVHGPSPR	8	0	Q5T200-2;Q5T200;Q5T9K0	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	1	FVHGPS(1)PR	74.173	0.031893	12428000.0	3175.8	3309.6	3785.6	3539.9	2988.7	3366.7	3228.0	3258.0	3008.7	3260.2	True	False	3036.1956345955477	3856.455146418707	2991.0542932849194	3229.562463049306	3381.7664357217327	4017.2671268459085	3951.9611708575176	3143.414293348021	2868.8261937044613	2669.7461880160827	1.1372600317679553	1.4445025387542478	1.12035155503213	1.2096889500380668	1.266699602719448	1.5047374708796506	1.4802759860083414	1.177420650494093	1.074568888451646	1.0	11.382486876501524	-9.626237697574208	3.230961766703113	1.030899253870303	1.3100174712590336	0.41285799010848223	0.1293587194183484	0.2622501847465585	5.148226856515649	0.11273934916504147	0.035999555888831254	2.3646251392411147e-10	9.626237697574208	0.27911821738873055	
FVINYDYPNSSEDYIHR	ddPTM_K562_Methotrexat_30min_R1	4	FVINYDYPNSSEDYIHR	17	0	J3KTA4;P17844-2;P17844	J3KTA4	DDX5	Probable ATP-dependent RNA helicase DDX5	0	;;;	131.82	4.3628e-05	69485000.0	10533.1	9404.6	11428.900000000001	11178.0	10260.599999999999	10031.6	9713.400000000001	11530.2	11470.1	13425.8	False	True	10070.07753597783	10958.550299132643	9030.130075159566	10198.042094964594	11610.048747069442	11970.06472500295	11891.877210968836	11124.676330620427	10936.857554561626	10994.257521338046	0.9159397545885628	0.9967521933940422	0.821349696205821	0.9275789724928556	1.056010260314191	1.0887560803238439	1.0816444119021824	1.0118624481034084	0.9947790956628935	1.0	13.42446255705269	-7.729184302282631	6.450727370278595	1.044164595130068	0.9135057607740635	0.5978252482171835	0.04952095666591609	0.12661186068464467	15.655834380849514	0.015396061898169574	0.019518634033367815	1.8655878201693483e-08	7.729184302282631	-0.13065883435600445	
FVINYDYPNSSEDYVHR	ddPTM_K562_Methotrexat_30min_R1	2	FVINYDYPNSSEDYVHR	17	0	A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2	A0A1X7SBZ2	DDX17	Probable ATP-dependent RNA helicase DDX17	0	;	118.31	0.00060586	14722200.0	3318.5	3320.8999999999996	3750.7999999999997	3170.2	3335.8	2988.3	3104.4	3141.9	3839.0	3700.8	False	True	3172.6227134597034	3869.6222793515494	2963.558337714782	2892.273488053029	3774.51616966593	3565.7466822567008	3800.6407245384357	3031.397596154127	3660.5257279328034	3030.5492585147877	1.0468804308478863	1.2768715995885098	0.9778947923014996	0.9543727032077595	1.2454891333842717	1.1766008000820956	1.2541095360387096	1.0002799286752906	1.2078753439324577	1.0	11.565363576948583	-4.899067056370356	14.786498777269287	1.1196307050621825	1.0549052797272003	0.0	0.12285369300390897	0.0	0.0	0.02778483914872931	0.0	1.2616327196757873e-05	4.899067056370356	-0.06472542533498227	
FVKVVLMS(ph)AT(ph)IS(ph)CK	ddPTM_K562_Methotrexat_30min_R1	1	FVKVVLMSATISCK	14	1	H0YJJ2;Q8NDG6-2;Q8NDG6	H0YJJ2	TDRD9	Putative ATP-dependent RNA helicase TDRD9	3	FVKVVLMS(1)AT(1)IS(1)CK	55.841	0.032206	7785300.0	167.33	145.42	180.14	285.72	0.0	0.0	167.0	106.47	168.63	60.34	True	False	159.97437355528479	169.4481832826349	142.3310757587557	260.67137120891766	0.0	0.0	204.45400109454923	102.7253897522295	160.7904281066186	49.41184129344529	3.2375715894745682	3.429303155822954	2.8805054018020693	5.275483859442755	0.0	0.0	4.137753132500063	2.078962998811714	3.254086953605354	1.0	5.626784912571733	-3.000000302472715	0.21081339386240827	1.693336834475068	11.808119312228374	0.11042944176412528	1.5619439059997098	131.02358820276552	1.633402967692886	2.775355099966398	445.0652957604647	0.0009999993035310782	3.000000302472715	10.114782477753305	
FWEGDFHR	ddPTM_K562_Methotrexat_30min_R1	4	FWEGDFHR	8	0	B4DKY1;P49589-2;P49589;P49589-3	B4DKY1	CARS	Cysteine--tRNA ligase, cytoplasmic	0	;;;	162.25	8.3385e-13	29468900.0	16528.4	14251.900000000001	17361.399999999998	15173.899999999998	15068.0	13548.400000000001	13446.1	17066.4	18735.899999999998	18602.8	False	True	15801.83132654736	16606.78423412038	13717.47939756889	13843.627745999573	17049.70611083584	16166.436552517036	16461.730204295916	16466.165038672396	17864.872098456934	15233.652655182364	1.0372975992183797	1.0901380391176825	0.9004721131607472	0.9087530127772792	1.1192132639991412	1.0612317950558854	1.0806160923392047	1.0809072132198538	1.172724132736442	1.0	13.894974285635906	-7.77826657297149	24.99919355955502	1.0883416389757918	0.9857565848105687	0.3625703481952892	0.06594132701844484	280.1062761870527	416136.03619725705	0.021449429439545295	0.024383312222811565	1.6662241586349725e-08	7.77826657297149	-0.10258505416522312	
FWEVISDEHGIDPTGSYHGDSDLQLER	ddPTM_K562_Methotrexat_30min_R1	2	FWEVISDEHGIDPTGSYHGDSDLQLER	27	0	Q9BVA1;Q13885	Q9BVA1	TUBB2B;TUBB2A	Tubulin beta-2B chain;Tubulin beta-2A chain	0	;	103.71	5.6265e-09	243706000.0	1677.25	952.6800000000001	1714.3	1543.14	1302.06	1179.88	1176.34	1799.5	1561.8000000000002	2289.7	False	True	1603.5200982824445	1110.0941772087792	1354.4918572956299	1407.8553120794118	1473.3037124153789	1407.8751114215568	1440.1641895063597	1736.2105650336903	1489.1922588917573	1875.0131423533596	0.8552047247358705	0.5920460780426754	0.722390593804364	0.7508509035368092	0.7857564723872875	0.7508614631119384	0.7680821840527401	0.9259724776406335	0.7942303044461052	1.0	10.872684992452776	-9.864973848832799	0.40044239149041044	1.0112777859186837	0.7066808054899835	0.5371793840636839	0.07262811571141159	0.8971442921346056	0.4035046507418111	0.1016467503962632	0.05992106334388902	1.3646653078291272e-10	9.864973848832799	-0.3045969804287002	
FWEVISDEHGIDPTGTYHGDSDLQLDR	ddPTM_K562_Methotrexat_30min_R1	4	FWEVISDEHGIDPTGTYHGDSDLQLDR	27	0	Q5JP53;P07437	Q5JP53	TUBB	Tubulin beta chain	0	;;;	139.45	6.551699999999999e-22	282024400.0	3566.23	1904.71	2603.56	3324.79	2447.5499999999997	2157.91	2571.31	5023.78	4879.84	6697.280000000001	False	True	3409.462799283233	2219.4309529656703	2057.10833575256	3033.310822769486	2769.4457254828976	2574.8955670811342	3147.9917218827873	4847.090809894388	4652.9773035154	5484.33769402992	0.6216726593978099	0.404685319684394	0.3750878320260738	0.5530860774805049	0.5049735957174246	0.46949982126083983	0.5739966970505105	0.8838060455633103	0.8484118891111477	1.0	12.421101691392433	-9.217311065974858	2.4246918081197317	0.9218945275376235	0.48212346240931997	0.8684030563459871	0.07388813120141308	0.10377298338820398	1.175881115622492	0.0473472751374666	0.02141126104878323	6.063019067244001e-10	9.217311065974858	-0.4397710651283035	
FWEVISDEHGIDPTGTYHGDSDLQLER	ddPTM_K562_Methotrexat_30min_R1	3	FWEVISDEHGIDPTGTYHGDSDLQLER	27	0	P68371;M0R0X0;M0QY85;M0QY37;M0QX14;M0R2D3;M0QZL7;M0QYM7;M0R278;P04350	P68371	TUBB4B;TUBB4A	Tubulin beta-4B chain;Tubulin beta-4A chain	0	;;	95.319	4.4424e-06	79663000.0	3476.58	2172.09	2382.73	2993.3900000000003	2642.14	2255.9100000000003	2452.5099999999998	4906.6	4301.4	5262.9	False	True	3323.753705939353	2530.990953282758	1882.6275349320526	2730.964146237792	2989.6277212426207	2691.832680108998	3002.547797750858	4734.032096912643	4101.428852860161	4309.737811456302	0.7712194688744244	0.587272605436643	0.43683110604259584	0.6336729206538375	0.6936913223109498	0.6245931418272059	0.6966892022455232	1.0984501387366228	0.951665514769273	1.0	12.073384388403966	-9.154419240105323	4.367922998656653	1.0177137081228635	0.620922040103467	0.8027049979597991	0.08713834523131032	0.09914452740300969	3.1385783175499142	0.04557854957867225	0.025284682267657316	7.007784850848629e-10	9.154419240105323	-0.3967916680193966	
FY(ph)LENLEQMVK	ddPTM_K562_Methotrexat_30min_R1	1	FYLENLEQMVK	11	0	Q8WTT2	Q8WTT2	NOC3L	Nucleolar complex protein 3 homolog	1	FY(1)LENLEQMVK	74.533	0.019088	34025000.0	716.11	484.71	674.04	501.53	418.71	377.47	347.12	425.92	225.19	537.62	True	False	684.6306618459033	564.8000888387154	532.5682153016081	457.56164357555843	473.777704119198	450.4107352512925	424.97049616730493	410.940152186246	214.72096605188537	440.2518083556855	1.5550888124752023	1.282902371141212	1.2096900119291252	1.0393180332058696	1.0761516366933954	1.0230752644345744	0.9652896094954035	0.933420702395484	0.48772307569582846	1.0	8.78218511978333	-4.830104247816994	0.32470440988463783	0.8077310842665232	3.215881605716272	0.712792953654248	0.13926379365227576	9.603285345089166	0.39277534625125604	0.13368376514882077	10.920599185989845	1.4787533863844693e-05	4.830104247816994	2.4081505214497487	
FY(ph)T(ph)HVLMS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	FYTHVLMSK	9	0	A0A140T8W2;Q9H4I0-2;Q9H4I0	A0A140T8W2	RAD21L1	Double-strand-break repair protein rad21-like protein 1	3	FY(1)T(1)HVLMS(1)K	57.174	0.030475	85434000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	57.571999999999996	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	47.14515291591371	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	5.55903754715281														
FYEEVHDLER	ddPTM_K562_Methotrexat_30min_R1	6	FYEEVHDLER	10	0	F8VRJ2;F5H4R6;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;P55209;F8VV59;B7Z9C2;H0YIV4;F8W0J6;P55209-3;P55209-2;F8W543;H0YH88;F8VVB5;E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PKT8;C9JZI7;E9PNW0;E9PJJ2	F8VRJ2;E9PNJ7	NAP1L1;NAP1L4	Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4	0	;;;;;	178.54	6.0513e-10	552103200.0	40618.99999999999	34206.0	43222.50000000001	41114.3	36536.299999999996	33708.4	35138.4	43751.700000000004	43253.5	46641.9	False	True	38833.437395817324	39857.96009741308	34150.687920410914	37509.873153068766	41341.4638556764	40222.07123253412	43019.08067102224	42212.927912300365	41242.65422587692	38194.59994074818	1.016725858002445	1.043549615894532	0.894123461782277	0.9820726807260283	1.0823902834382344	1.0530826686215116	1.126313163058609	1.1052067040310902	1.0798032782083653	1.0	15.22108105997256	-7.760985714921867	24.644557007333056	1.0812495531304682	0.9819348329903427	0.4592409804201375	0.04766611304310122	8.705994814165694	472913.28892840014	0.014704235758741585	0.01782918227391196	1.7338610280272487e-08	7.760985714921867	-0.09931472014012555	
FYEEVHDLERK	ddPTM_K562_Methotrexat_30min_R1	4	FYEEVHDLERK	11	1	F8VRJ2;F5H4R6;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;P55209;F8VV59;B7Z9C2;H0YIV4;F8W0J6;P55209-3;P55209-2;F8W543;H0YH88;F8VVB5;E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PKT8;C9JZI7;E9PNW0;E9PJJ2	F8VRJ2;E9PNJ7	NAP1L1;NAP1L4	Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4	0	;;;	94.40899999999999	0.004296100000000001	55107000.0	27345.0	20521.699999999997	36987.1	31550.0	20136.6	19159.600000000002	18821.9	24323.8	24500.8	34222.4	False	True	26142.94654197851	23912.562115742334	29224.013168628135	28784.060484535035	22784.915852897335	22861.921538455135	23043.19019881136	23468.318167138925	23361.76315575306	28024.391738163773	0.9328640131152927	0.8532767575889283	1.0428063324860932	1.0271074124808475	0.8130387294675413	0.8157865388143873	0.8222547848355622	0.8374247115301218	0.8336224876538133	1.0	14.774395439614658	-7.772337750870976	24.983357707761343	0.8420923783401327	0.9617319073307999	0.3602775183353355	0.07099359288074222	218.6529304215624	501236.8242093877	0.022130469574799267	0.02533475635689688	1.6891267865983785e-08	7.772337750870976	0.11963952899066721	
FYFHDGVR	ddPTM_K562_Methotrexat_30min_R1	2	FYFHDGVR	8	0	H0Y8C6;O00410-2;O00410;O00410-3	H0Y8C6	IPO5	Importin-5	0	;	148.04	1.4573000000000001e-08	14810000.0	6777.0	5770.9	6889.1	6340.6	6430.4	5764.3	5658.2	6565.5	6867.4	7219.799999999999	False	True	6479.091194550674	6724.443136471995	5443.172055121816	5784.729442416576	7276.110311595361	6878.16939414794	6927.19538319269	6334.5876436391745	6548.1360729371545	5912.2242587075925	1.0958804860976297	1.1373795786870156	0.9206640034171655	0.9784353889987781	1.23068916083131	1.1633810040303685	1.1716733127959813	1.071438999342679	1.1075588114393637	1.0	12.529485278569213														
FYHEELNAPIRR	ddPTM_K562_Methotrexat_30min_R1	2	FYHEELNAPIRR	12	1	Q9NZ63	Q9NZ63	C9orf78	Uncharacterized protein C9orf78	0	;	158.08	1.2307e-07	25781000.0	3481.5	3555.0	3824.2999999999997	3913.7	3248.8	2994.77	3161.6000000000004	3774.3	3267.0	3777.1	False	True	3328.4574286303928	4142.403325331917	3021.6316921517123	3570.5919974112453	3676.074144736097	3573.4669181882336	3870.66928060196	3641.5557297063965	3115.117883083217	3093.030589152673	1.0761152638785296	1.3392700802440871	0.9769162008124463	1.1543991869764854	1.1885023567591508	1.1553286704374865	1.2514164244532475	1.1773422941491147	1.0071409878738362	1.0	11.59480538598472	-9.764432746142084	23.875731609139958	1.0035702796518313	1.167456825125264	0.33627950624072867	0.09061001591430119	49.48752811802421	394661.0550954603	0.07257016876684193	0.02194398902783453	1.7201536997122378e-10	9.764432746142084	0.16388654547343262	
FYVHNDIFR	ddPTM_K562_Methotrexat_30min_R1	1	FYVHNDIFR	9	0	Q13283;E5RIZ6	Q13283	G3BP1	Ras GTPase-activating protein-binding protein 1	0		93.178	0.016812999999999998	5562000.0	4712.8	2884.5	3819.9	4307.8	3262.1	3111.4	3417.9	6438.4	6831.9	8789.6	False	True	4505.630954947383	3361.114596883239	3018.155192022153	3930.1418622909705	3691.1233278575555	3712.634015049862	4184.451079886589	6211.95782268014	6514.286460188625	7197.718267034584	0.625980454887084	0.4669694578457011	0.4193211070576697	0.5460260761095564	0.5128185337237818	0.5158070762582716	0.5813579977214859	0.8630454252607791	0.9050488249899883	1.0	12.813323918085233	-9.307392308469165	1.8451416267244205	0.9649597005141956	0.5064274034975997	0.922030972317238	0.05386826273775453	0.09271219636057096	0.577471321336086	0.04186333709265143	0.0160370925582885	4.927285095554264e-10	9.307392308469165	-0.4585322970165958	
GAAAADLLSS(ph)SPESQHGGTQSPGGGQPLLQPTKVDAAEGR	ddPTM_K562_Methotrexat_30min_R1	2	GAAAADLLSSSPESQHGGTQSPGGGQPLLQPTKVDAAEGR	40	1	Q9H3S7	Q9H3S7	PTPN23	Tyrosine-protein phosphatase non-receptor type 23	1	GAAAADLLS(0.041)S(0.416)S(0.416)PES(0.12)QHGGT(0.004)QS(0.004)PGGGQPLLQPTKVDAAEGR;GAAAADLLS(0.04)S(0.293)S(0.293)PES(0.293)QHGGT(0.04)QS(0.04)PGGGQPLLQPTKVDAAEGR	90.38600000000001	7.3206e-15	99560000.0	3710.0	3002.7	4288.9	3863.0	2901.7	2616.0	2284.2599999999998	3496.1	3428.8	3745.6	True	False	3546.9128422285694	3498.8451378267646	3388.718501286372	3524.336787694418	3283.324410791901	3121.5049763355523	2796.5634523367376	3373.140181391656	3269.39583639906	3067.235544393913	1.1563874997182326	1.1407161553737595	1.1048119559908087	1.1490271081840988	1.0704506919245051	1.0176932717282927	0.9117537312868287	1.0997330112311898	1.0659096078795258	1.0	11.582723245424406	-7.977615832079347	3.1188127218705106	1.019295689468999	1.1355751494164565	0.5823864528113585	0.047255484792292475	0.2002919431963839	4.02282357279437	0.0168335536689773	0.018538103226098026	1.0528928292411713e-08	7.977615832079347	0.11627945994745748	
GAAAADLLSSS(ph)PESQHGGTQSPGGGQPLLQPTK	ddPTM_K562_Methotrexat_30min_R1	1	GAAAADLLSSSPESQHGGTQSPGGGQPLLQPTK	33	0	Q9H3S7	Q9H3S7	PTPN23	Tyrosine-protein phosphatase non-receptor type 23	1	GAAAADLLS(0.08)S(0.353)S(0.389)PES(0.134)QHGGT(0.034)QS(0.009)PGGGQPLLQPTK	70.178	2.0548e-05	11556000.0	2456.6	1882.6	2918.4	2138.9	1871.8	1800.7	1709.6	2177.8	2457.1	2441.5	True	False	2348.610805449786	2193.6676512714107	2305.8677222957294	1951.3859578564823	2117.9745087777114	2148.6597900945835	2093.0213189894707	2101.2055396112087	2342.8699573075532	1999.320691381285	1.1747043961352615	1.0972064965505137	1.1533255931556723	0.9760244898522579	1.0593470661849906	1.074694919808049	1.0468662321217963	1.0509597328078137	1.1718329967809806	1.0	10.96529418383722	-7.222110322006111	24.99819724658617	1.0571268096226556	1.1372916210822015	0.3739561738932581	0.0516904992724018	616.6305592438744	391939.9609984282	0.013702931143183435	0.023733639306468834	5.996387331938651e-08	7.222110322006111	0.0801648114595459	
GAAAADLLSSSPES(ph)QHGGTQSPGGGQPLLQPTK	ddPTM_K562_Methotrexat_30min_R1	1	GAAAADLLSSSPESQHGGTQSPGGGQPLLQPTK	33	0	Q9H3S7	Q9H3S7	PTPN23	Tyrosine-protein phosphatase non-receptor type 23	1	GAAAADLLS(0.047)S(0.296)S(0.296)PES(0.358)QHGGT(0.002)QSPGGGQPLLQPTK	96.56299999999999	6.774600000000001e-10	12527000.0	3851.2	3073.5	4380.2	3739.2	3083.0	2832.3	2541.3	3415.4	3450.8	3797.1	True	False	3681.905859296675	3581.343634432528	3460.8558789746944	3411.3901414825195	3488.4685386054484	3379.601890089903	3111.2512154585506	3295.2784461328497	3290.373061200968	3109.4083953487107	1.1841178099359189	1.1517765372312538	1.1130271225071964	1.097118714474926	1.1219074804788476	1.086895467042981	1.0005926593986807	1.0597766607507002	1.0581990664600245	1.0	11.602424399974057	-3.0000000000000004	0.1712359449502958	0.9891377384851291	1.7992707235736036	0.8234059296154144	0.02385745630602327	24.944944034587603	0.27104236916020236	0.06493492940743907	5.188929698448154	0.000999999999999999	3.0000000000000004	0.8101329850884745	
GAAEEEQQDS(ph)GSEPRGDEDDIPLGPQSNVSLLDQHQHLK	ddPTM_K562_Methotrexat_30min_R1	1	GAAEEEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLK	39	1	D6RGI7;A0A499FJW5;Q9UJV9	D6RGI7	DDX41	Probable ATP-dependent RNA helicase DDX41	1	GAAEEEQQDS(0.499)GS(0.499)EPRGDEDDIPLGPQS(0.001)NVSLLDQHQHLK	54.856	0.00088711	29025000.0	1223.3	1142.8	1877.1	1289.8	1121.0	945.02	946.43	1246.2	1361.2	1657.5	True	False	1169.5251967380618	1331.6282757213257	1483.1223620892656	1176.7252365436868	1268.431148808533	1127.6317403427456	1158.6910194964928	1202.3704396471157	1297.9181091070934	1357.3106884966116	0.8616488521382343	0.9810784568389922	1.0926918756766042	0.8669534886276146	0.934517910717609	0.8307838064634533	0.8536667612776891	0.8858476175258656	0.9562424580511462	1.0	10.406535276199705														
GAASTLVPGVSET(ph)SASPGSPSVR	ddPTM_K562_Methotrexat_30min_R1	2	GAASTLVPGVSETSASPGSPSVR	23	0	A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2	A0A0A0MS59	SRCAP	Helicase SRCAP	1	GAASTLVPGVS(0.142)ET(0.467)S(0.2)AS(0.191)PGSPSVR;GAASTLVPGVS(0.162)ET(0.522)S(0.188)AS(0.125)PGS(0.003)PSVR	192.22	3.6893e-22	190183000.0	8233.7	7393.6	8205.5	8678.0	7282.5	7730.9	7915.2	7585.799999999999	8420.7	8815.1	True	False	7871.756406754007	8615.266730288056	6483.27768479222	7917.21321346419	8240.276397143754	9224.787011296834	9690.385086608238	7319.003114327628	8029.223494973633	7218.599969934533	1.0904824258914292	1.1934816676600228	0.8981350555225486	1.096779603585097	1.1415338751924893	1.2779191324797148	1.3424189076785926	1.013908949770215	1.1122965018722948	1.0	12.817503341679084	-5.234395854329241	12.567156420392024	1.1240315296021706	1.106463381107123	0.0	0.12531960566199796	0.0	0.0	0.030090428667658816	0.0	5.8291354319327875e-06	5.234395854329241	-0.01756814849504762	
GAASTLVPGVSETSAS(ph)PGSPSVR	ddPTM_K562_Methotrexat_30min_R1	1	GAASTLVPGVSETSASPGSPSVR	23	0	A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2	A0A0A0MS59	SRCAP	Helicase SRCAP	1	GAASTLVPGVS(0.001)ET(0.04)S(0.016)AS(0.848)PGS(0.095)PSVR	244.73	6.185099999999998e-78	10881000.0	1180.1	1317.8	1677.5	1436.6	1176.0	1580.2	1483.1	1435.6	1514.5	1323.8	True	False	1128.2242170118425	1535.5440512299292	1325.415674393876	1310.6555084653905	1330.6646128446341	1885.5512857818944	1815.7229282833885	1385.1091342941731	1444.091225567656	1084.0469921157257	1.0407521308738623	1.4164921469253102	1.2226551838007254	1.2090393848216807	1.2274971680402773	1.739363052981568	1.674948541427763	1.2777205641158293	1.3321297287576388	1.0	10.082211581780879														
GADAGSSGGTGPTEGYS(ph)PPAASTR	ddPTM_K562_Methotrexat_30min_R1	1	GADAGSSGGTGPTEGYSPPAASTR	24	0	J3KT76;J3KSI9;Q969W3;Q969W3-2	J3KT76	FAM104A	Protein FAM104A	1	GADAGSSGGTGPT(0.001)EGYS(0.988)PPAAS(0.007)T(0.005)R	161.04	2.6724e-49	0.0	356.41	278.7	429.84	312.56	411.4	211.02	168.17	371.36	360.8	359.58	True	False	340.7426431532842	324.7504379099871	339.6224581111555	285.15835008070593	465.5063109900365	251.79662848101233	205.88640337766677	358.2990583111485	344.0264867512778	294.45657759855925	1.1571914811080497	1.1028805692115606	1.1533872358394797	0.9684224153059	1.5808996857413526	0.8551231238729318	0.6992080294377304	1.2168145851359702	1.1683436979298814	1.0	8.201911090716617														
GADNDGS(ph)GS(ph)ESGYTTPK	ddPTM_K562_Methotrexat_30min_R1	3	GADNDGSGSESGYTTPK	17	0	Q7Z417	Q7Z417	NUFIP2	Nuclear fragile X mental retardation-interacting protein 2	2	GADNDGS(0.932)GS(0.365)ES(0.34)GY(0.306)T(0.049)T(0.009)PK;GADNDGS(0.918)GS(0.956)ES(0.076)GY(0.033)T(0.015)T(0.002)PK;GADNDGS(0.999)GS(0.916)ES(0.037)GY(0.005)T(0.029)T(0.014)PK	122.01	0.00040365	46354600.0	13872.7	9896.7	14922.7	13732.3	9040.099999999999	8447.5	8470.5	11290.5	11965.400000000001	15057.3	True	False	13262.872718701965	11531.96145986283	11790.629200761534	12528.410579771176	10229.031604231955	10079.859819416883	10370.225247134014	10893.406715483676	11409.131165670018	12330.277061779812	1.0756346067691311	0.935255663930576	0.956233922537635	1.0160688617943159	0.8295865172356027	0.8174885096995466	0.8410374880608826	0.8834681216734369	0.9252939823254197	1.0	13.589917597065133	-5.896122380148655	0.6598765316255065	0.8818210608537987	1.2554579892078908	0.3794189535434882	0.0644994284769924	5.158395178335954	1.2174082341517016	0.02965514947855591	1.612274228160752	1.2702161196753134e-06	5.896122380148655	0.373636928354092	
GADNDGS(ph)GSESGYTT(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	GADNDGSGSESGYTTPK	17	0	Q7Z417	Q7Z417	NUFIP2	Nuclear fragile X mental retardation-interacting protein 2	2	GADNDGS(0.619)GS(0.125)ES(0.255)GYT(0.023)T(0.977)PK	132.9	0.00034363	4788000.0	2329.9	2416.3	4350.1	2860.1	2402.8	2193.2	2139.2	2643.2	2650.0	3644.7	True	False	2227.4803857434895	2815.5525049225075	3437.0734576338573	2609.3594735917195	2718.810316108068	2617.0048601296376	2618.970054739279	2550.2371578199773	2526.8020784115474	2984.6095121349026	0.7463222162520564	0.9433570768554349	1.1515990429097391	0.8742716469214878	0.9109433931151993	0.8768332505439493	0.8774916933324117	0.8544625846199166	0.8466106095748909	1.0	11.54332647519477														
GADNDGS(ph)GSESGYTTPK	ddPTM_K562_Methotrexat_30min_R1	2	GADNDGSGSESGYTTPK	17	0	Q7Z417	Q7Z417	NUFIP2	Nuclear fragile X mental retardation-interacting protein 2	1	GADNDGS(0.974)GS(0.026)ESGYTTPK;GADNDGS(0.506)GS(0.489)ES(0.005)GYTTPK	209.19	2.5507e-22	212170000.0	9383.5	7894.0	13643.5	11296.7	8604.9	7091.5	6375.6	8055.9	8771.099999999999	11094.5	True	False	8971.012575485647	9198.349324942377	10779.915799459222	10306.335850258232	9736.59517607721	8461.8320105824	7805.490595080291	7772.56943087241	8363.333475454918	9085.178542096935	0.9874338224524383	1.012456638284108	1.1865386849041635	1.1344120319158244	1.0717010272238328	0.9313886316459048	0.8591455367566964	0.8555219245122766	0.9205469586208693	1.0	13.149299151269725	-8.299533361808777	3.6965123486835156	0.8969658167628498	1.085486727253974	0.6174703010055009	0.06483375104058862	0.15645400926122466	4.554225078441572	0.02504229252969348	0.022660170408252918	5.0172603576321695e-09	8.299533361808777	0.1885209104911243	
GADNDGSGS(ph)ESGYTTPK	ddPTM_K562_Methotrexat_30min_R1	1	GADNDGSGSESGYTTPK	17	0	Q7Z417	Q7Z417	NUFIP2	Nuclear fragile X mental retardation-interacting protein 2	1	GADNDGS(0.451)GS(0.531)ES(0.019)GYTTPK	127.01	8.523299999999999e-05	43234000.0	6920.4	5309.4	10276.0	8061.4	5823.1	5429.3	5021.4	6035.5	6276.8	8035.7	True	False	6616.187502252988	6186.6881056307375	8119.208029848861	7354.669578130927	6588.939716884008	6478.435385328212	6147.5767730309535	5823.228044046037	5984.992938027772	6580.3568624749505	1.0054450906731769	0.9401751660173413	1.233855275562537	1.1176703227254379	1.0013043144298148	0.9845112538306312	0.9342315168479748	0.8849410701801744	0.9095240673279754	1.0	12.683950110227812	-8.284881030252166	1.8733991748203163	0.9246412944533589	1.0729064700371735	0.38667468597558297	0.07757591284706115	0.3730587402265906	2.5776935169885515	0.03456035572225125	0.03111235164950102	5.189421774250383e-09	8.284881030252166	0.1482651755838147	
GADNDGSGSESGYT(ph)TPK	ddPTM_K562_Methotrexat_30min_R1	1	GADNDGSGSESGYTTPK	17	0	Q7Z417	Q7Z417	NUFIP2	Nuclear fragile X mental retardation-interacting protein 2	1	GADNDGSGSESGY(0.052)T(0.911)T(0.037)PK	118.73	0.00093385	10192000.0	2921.3	2464.5	5208.4	2915.4	2527.7	3024.3	2313.1	3812.4	2923.7	4810.8	True	False	2792.8831498658546	2871.7167356625882	4115.228016997355	2659.8114084505078	2860.1368553464154	3608.7031727567314	2831.871556477857	3678.3157311111113	2787.7778251516393	3939.517502394875	0.7089404091155912	0.7289513839999038	1.0446020393349347	0.6751617188738418	0.7260119681173411	0.91602668869042	0.7188371557573566	0.9336970146407584	0.7076444827207695	1.0	11.94380322918432	-15.999999999999746	0.3755654144314774	3.7175031731411523	0.7959006785428624	0.20681352652271556	0.11886454402263544	937.3773643403027	7.140205287282426	2071.351215151726	0.07990234667130718	1.0000000000005848e-16	15.999999999999746	-2.92160249459829	
GADNDGSGSESGYTT(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	GADNDGSGSESGYTTPK	17	0	Q7Z417	Q7Z417	NUFIP2	Nuclear fragile X mental retardation-interacting protein 2	1	GADNDGSGSESGY(0.001)T(0.066)T(0.933)PK	113.28	0.0019892	10431000.0	2345.8	2018.2	3451.2	2307.4	2531.8	2500.3	1614.1	3084.4	2190.6	3167.1	True	False	2242.6814407816114	2351.673246465507	2726.8402834385347	2105.1138244696103	2864.7760772109245	2983.447588811843	1976.1030129743237	2975.9199037454373	2088.7594841389937	2593.5075001735254	0.8647291132304645	0.9067539794306213	1.0514102169575712	0.8116860368935745	1.1045952545035052	1.1503524044608422	0.7619422781087417	1.1474498930681039	0.8053801594941368	1.0	11.340688826504369	-6.565676964943742	8.57080074393878	0.9812317210827614	0.8750297550863745	0.07368494769951106	0.13586481667829303	0.5907547326660657	108.11343590550426	0.032801388133936	0.08786047931440545	2.7184605506664654e-07	6.565676964943742	-0.10620196599638687	
GADSLEDFLYHEGYACTSIHGDR	ddPTM_K562_Methotrexat_30min_R1	2	GADSLEDFLYHEGYACTSIHGDR	23	0	A0A2R8Y5G6;A0A2R8Y4A4;A0A2R8YFS5;A0A2R8YFR4;A0A2R8YCW1;A0A0D9SFB3;A0A2R8Y645;A0A2U3TZJ9;A0A0D9SG12;A0A2R8YF78;F6S8Q4;O00571;A0A2R8YDT5;A0A0J9YVQ7;A0A0D9SF53;O00571-2;A0A2R8YDH3;A0A2R8Y7T2;O15523-2;O15523	A0A2R8Y5G6	DDX3X;DDX3Y	ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y	0	;	163.78	3.4052e-19	15879300.0	3345.5	2829.6	3561.4	3768.3	3434.0	2974.6	3038.7	3873.3999999999996	3665.7	3826.1	False	True	3198.435825788592	3297.1433050236824	2813.9108094106377	3437.9389896631815	3885.6311909085694	3549.399351149743	3720.2058271018386	3737.1703265359815	3495.282407106872	3133.1562143329625	1.020835096302253	1.0523392641389993	0.8981074089246166	1.0972765972969867	1.2401651641668323	1.1328510640205653	1.1873668507441009	1.1927813587589062	1.1155787225409715	1.0	11.613400986712291	-7.51360647826682	24.269360987519576	1.1571213966947798	0.9967973598816576	0.4851694806359341	0.07034705832329466	224.96270142123288	588821.1502378295	0.01921076929591602	0.026270932375696242	3.064739189048252e-08	7.51360647826682	-0.16032403681312213	
GAEETSWS(ph)GEER	ddPTM_K562_Methotrexat_30min_R1	2	GAEETSWSGEER	12	0	Q9H7N4	Q9H7N4	SCAF1	Splicing factor, arginine/serine-rich 19	1	GAEETSWS(1)GEER;GAEETS(0.003)WS(0.997)GEER	171.62	0.0013031	240820000.0	3536.6	3125.9	3790.0	3540.7	2798.8999999999996	3076.1	3248.6	3489.0	3230.4	3528.5	True	False	3381.135298605269	3642.40184378482	2994.5307934144785	3230.2923282913866	3167.0044089207872	3670.5127896428844	3977.1812452440286	3366.2898924159736	3080.21940909459	2889.4544581359264	1.1701639003462752	1.260584617808665	1.036365458186297	1.1179592463192325	1.0960561776647335	1.270313425189211	1.376447112376302	1.1650261117414074	1.0660210962735615	1.0	11.496581415852905	-9.861213120907413	3.2376544064328714	1.005379851317064	1.1885026967150634	0.3212779858789322	0.09198687997516916	0.30158603150456437	5.889324449542739	0.09632110604671752	0.026036152335948633	1.3765337980340713e-10	9.861213120907413	0.1831228453979994	
GAES(ph)PFEEK	ddPTM_K562_Methotrexat_30min_R1	4	GAESPFEEK	9	0	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK	170.89	7.876300000000001e-11	398510000.0	26562.4	19648.0	37948.3	29471.5	19468.8	18479.6	17659.799999999996	22674.9	23163.4	27568.600000000002	True	False	25394.748700919703	22894.498041103077	29983.470424203344	26887.779352455615	22029.288447746276	22050.521162343455	21620.459691793545	21877.41091474435	22086.53858984077	22575.659394804057	1.1248729552840648	1.0141231155521597	1.3281326538397475	1.1910074865252451	0.9757982286363014	0.9767387422321996	0.9576889566631946	0.9690707381853744	0.978334151999305	1.0	14.46248050642372	-7.7665033942309565	24.790908048491914	0.9738195105714564	1.1654760412178082	0.6174981826070978	0.0725715767937537	78.49199894909745	384257.5725974247	0.02345066663047126	0.02741226135946019	1.711971796725405e-08	7.7665033942309565	0.1916565306463518	
GAGPQLLEELDNAPGS(ph)DAAELELAPARTPPDSVKDASAAEPAAAER	ddPTM_K562_Methotrexat_30min_R1	1	GAGPQLLEELDNAPGSDAAELELAPARTPPDSVKDASAAEPAAAER	46	2	Q9UHR6	Q9UHR6	ZNHIT2	Zinc finger HIT domain-containing protein 2	1	GAGPQLLEELDNAPGS(0.532)DAAELELAPART(0.453)PPDS(0.011)VKDAS(0.005)AAEPAAAER	57.736000000000004	3.4376999999999997e-06	11104000.0	1845.6	1248.6	1998.2	1514.6	1433.2	1509.2	1577.8	1664.6	1826.2	1990.1	True	False	1764.469633859043	1454.9099274288137	1578.8051270186836	1381.8173695682028	1621.6909210280025	1800.8315406290578	1931.661813934012	1606.0550744957375	1741.3003606019495	1629.6736055367167	1.0827135126103564	0.8927615459229664	0.9687860941324627	0.8479105048235196	0.9951016666885973	1.1050258987510397	1.1853059455410635	0.9855072015888724	1.0684963876729596	1.0	10.670367332047524	-8.047719551107907	5.6110380869797325	1.073612173188826	0.9426621878139334	0.3569548570364781	0.07650049798821705	0.21394953380594645	16.1260146457718	0.025122484766111577	0.025703595183307625	8.959431407318612e-09	8.047719551107907	-0.13094998537489255	
GAGPQLLEELDNAPGSDAAELELAPART(ph)PPDSVKDASAAEPAAAER	ddPTM_K562_Methotrexat_30min_R1	1	GAGPQLLEELDNAPGSDAAELELAPARTPPDSVKDASAAEPAAAER	46	2	Q9UHR6	Q9UHR6	ZNHIT2	Zinc finger HIT domain-containing protein 2	1	GAGPQLLEELDNAPGS(0.179)DAAELELAPART(0.813)PPDS(0.007)VKDAS(0.001)AAEPAAAER	76.71600000000001	3.5308999999999997e-11	15723000.0	867.8	681.31	1236.2	1038.1	653.02	877.16	641.35	828.75	1237.1	1375.7	True	False	829.6525510743809	793.8848972100953	976.7385136725535	947.0913847542264	738.9035760882682	1046.6587557501887	785.1890634849648	799.602392760028	1179.5874910199723	1126.5473991944427	0.7364559641854735	0.7047061648518087	0.8670194564125641	0.8407026507996561	0.6559010092399432	0.929085413093688	0.6969871521131094	0.7097814023021114	1.0470819886171294	1.0	10.137692300538273	-9.766588400995719	24.999679090819072	1.0235411500244957	0.7705439771492852	0.6056231536400275	0.08259289365904858	89.32427697709595	433665.8088592967	0.07054935358523069	0.020400209793501444	1.7116367361888408e-10	9.766588400995719	-0.2529971728752105	
GAGQQQS(ph)QEMMEVDR	ddPTM_K562_Methotrexat_30min_R1	3	GAGQQQSQEMMEVDR	15	0	C9JRC4;B5MBZ8;Q15435-3;Q15435	C9JRC4	PPP1R7	Protein phosphatase 1 regulatory subunit 7	1	GAGQQQS(1)QEMMEVDR;GAGQQQS(1)QEMMEVDR;GAGQQQS(1)QEMMEVDR	142.19	1.911e-06	16533900.0	7814.8	6633.999999999999	7906.8	7841.099999999999	7655.200000000001	6593.9	7748.2	7332.9	7628.700000000001	8666.0	True	False	7471.270749177309	7730.155741280427	6247.2707328151955	7153.682937093114	8661.992979802928	7868.077853004203	9485.931085513692	7074.997750672713	7274.043402104974	7096.503424743074	1.052810137895171	1.0892907786569967	0.8803308275781428	1.0080574205249693	1.220600126761234	1.1087259995635192	1.336704926039985	0.9969695393938122	1.0250179513396527	1.0	12.792892642471624	-6.244718616226322	19.49943399533511	1.0796400344543158	1.0528097973709316	0.0007642236420741799	0.12161413842884213	1826.9289019064172	2129726.963740507	0.03210523109165905	0.5939705227931492	5.692216158177564e-07	6.244718616226322	-0.026830237083384167	
GAGQQQS(ph)QEMMEVDRR	ddPTM_K562_Methotrexat_30min_R1	2	GAGQQQSQEMMEVDRR	16	1	C9JRC4;B5MBZ8;Q15435-3;Q15435	C9JRC4	PPP1R7	Protein phosphatase 1 regulatory subunit 7	1	GAGQQQS(1)QEMMEVDRR;GAGQQQS(1)QEMMEVDRR	65.374	0.02101	26472000.0	6703.700000000001	5928.7	7657.900000000001	6733.9	6276.1	6630.5	5804.1	7290.5	6300.200000000001	7408.6	True	False	6409.013374783731	6908.316904330611	6050.611441395446	6143.549442054218	7101.5171570358925	7911.750285012564	7105.817172172896	7034.08898270526	6007.305077135259	6066.830749198194	1.056402204005899	1.13870275765376	0.9973265600322059	1.0126455963628396	1.1705480918475342	1.3040993909477694	1.171256866381515	1.1594338582191206	0.9901883414053042	1.0	12.56672734867864	-6.242850231484882	21.41126658797311	1.1139973290531031	1.056401857406812	0.013904716653960092	0.09874136676180074	2615.6982841842614	3012439.9976087552	0.026428406503652597	0.666979674580653	5.716757477798222e-07	6.242850231484882	-0.057595471646291196	
GAHAPQELPQAKGS(ph)DDELFLGGSNQDSVQGLGR	ddPTM_K562_Methotrexat_30min_R1	4	GAHAPQELPQAKGSDDELFLGGSNQDSVQGLGR	33	1	Q96JB3-2;Q96JB3	Q96JB3-2	HIC2	Hypermethylated in cancer 2 protein	1	GAHAPQELPQAKGS(1)DDELFLGGSNQDSVQGLGR;GAHAPQELPQAKGS(1)DDELFLGGSNQDSVQGLGR;GAHAPQELPQAKGS(1)DDELFLGGSNQDSVQGLGR;GAHAPQELPQAKGS(1)DDELFLGGSNQDSVQGLGR	111.68	1.9765e-15	529593000.0	7697.200000000001	6265.1	10339.8	8424.3	6118.6	6640.6	5787.0	7494.6	7770.6	9758.5	True	False	7358.840304367041	7300.301286508297	8169.617281727449	7685.754698569528	6923.303146387059	7923.801967069518	7084.882061881176	7231.010670020282	7409.346502077275	7991.141088201624	0.9208747816043278	0.9135492923891302	1.0223342563416047	0.9617843826981132	0.8663722827530658	0.9915732784105729	0.8865920378181686	0.9048783634537972	0.9271950551613549	1.0	12.964185810937645														
GAIIQT(ph)PT(ph)LGPIQPT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	GAIIQTPTLGPIQPTR	16	0	Q14118	Q14118	DAG1	Dystroglycan;Alpha-dystroglycan;Beta-dystroglycan	3	GAIIQT(1)PT(1)LGPIQPT(1)R	87.789	0.007287	0.0	749.73	742.88	997.53	891.11	780.7	815.89	822.16	888.48	725.59	802.57	True	False	716.7727669013543	865.6282931990366	788.1620850540221	812.9877698375283	883.3757340542575	973.5491953908307	1006.5503086221238	857.2316548047424	691.8574792734474	657.2167959376926	1.0906184554804164	1.3171122505534725	1.1992421525525707	1.2370161183686539	1.3441161874049334	1.481321234345216	1.531534669904495	1.3043361948497925	1.052708152849823	1.0	9.360225540279362	-9.785800216681862	4.519665572989152	1.0093097574501109	1.3220279765302756	0.4756838034315295	0.12080067110418188	0.18332265053647562	8.40641723230045	0.12049430688918118	0.033911100485707585	1.6375696598533296e-10	9.785800216681862	0.3127182190801647	
GAILSEEELAAMS(ph)PTAAAVAK	ddPTM_K562_Methotrexat_30min_R1	2	GAILSEEELAAMSPTAAAVAK	21	0	P12270;P12270-2	P12270	TPR	Nucleoprotein TPR	1	GAILSEEELAAMS(0.995)PT(0.005)AAAVAK;GAILSEEELAAMS(0.998)PT(0.002)AAAVAK	172.66	1.7895e-17	14868000.0	3423.8999999999996	2529.1	3830.2	3299.3999999999996	2954.6000000000004	2244.8	2620.3	3124.3	3067.6	4000.9	True	False	3273.3894556621003	2946.990787650336	3026.2933627799816	3010.1467246489665	3343.1816880193533	2678.5758298463484	3207.9689764553746	3014.4165981299034	2924.987945560476	3276.2982404863337	0.9991121733704555	0.8994879499165757	0.9236928816134756	0.918764564059388	1.0204143342954919	0.8175616605186531	0.9791443699518587	0.920067825596501	0.8927721870418887	1.0	11.677850975733302														
GAITAKELY(ph)T(ph)MMT(ph)DK	ddPTM_K562_Methotrexat_30min_R1	1	GAITAKELYTMMTDK	15	1	P40818;P40818-2;A0A075B720	P40818	USP8	Ubiquitin carboxyl-terminal hydrolase 8	3	GAITAKELY(1)T(1)MMT(1)DK	63.373999999999995	0.028713	7096500.0	3193.7	3098.9	3342.6	2931.8	2652.9	2604.5	2677.0	3305.0	3244.7	3893.6	True	False	3053.308772028404	3610.9405527063486	2641.033939331723	2674.7736459131506	3001.8028498431413	3107.7827640924856	3277.385394791066	3188.7612767081678	3093.8546052158304	3188.43131024459	0.9576209975789566	1.132513202057769	0.8283176528990757	0.8388995671065481	0.9414669967009163	0.9747058856519893	1.027899012364062	1.000103488653658	0.9703375435045818	1.0	11.638631085590895	-8.426906305785728	3.773971711910105	0.9998034110734827	0.9390013965217103	0.11391097180218102	0.0786107512344242	0.6161585465482755	16.02829079305269	0.03204027989651582	0.02738753811908292	3.7419130718604224e-09	8.426906305785728	-0.060802014551772365	
GAKAPR	ddPTM_K562_Methotrexat_30min_R1	1	GAKAPR	6	1	A0A1B0GVQ0;K7ES28;Q9Y2G9-3;Q9Y2G9	A0A1B0GVQ0	SBNO2	Protein strawberry notch homolog 2	0		25.081999999999997	0.034102	1974800.0	80.102	72.012	0.0	150.8	82.618	0.0	0.0	201.66	90.41	0.0	False	True	76.58081199142663	83.91075900528887	0.0	137.57959813210414	93.48371512244728	0.0	0.0	194.56750349802385	86.20685883365586	0.0											0.0														
GALHTVSHEDIR	ddPTM_K562_Methotrexat_30min_R1	1	GALHTVSHEDIR	12	0	A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72	A0A2R8Y7R9	PPFIA1	Liprin-alpha-1	0		83.137	0.017807	1728900.0	813.37	747.44	794.97	672.59	673.42	677.11	466.12	908.22	918.41	709.52	False	True	777.6152287017389	870.9417556922892	628.1166609078383	613.6250789633418	761.9865336580216	807.9519245132132	570.6592753903673	876.2773878160041	875.7133195599813	581.0190526106286	1.3383644223158715	1.4989900103602163	1.081060350922386	1.056118686996938	1.3114656571660979	1.390577332848092	0.9821696428478328	1.508173241271046	1.5072024155236141	1.0	9.182441662623445														
GALRAS(ph)PPSFPSGSPVLR	ddPTM_K562_Methotrexat_30min_R1	1	GALRASPPSFPSGSPVLR	18	1	Q9C073;D6RFX7;D6RJ87	Q9C073	FAM117A	Protein FAM117A	1	GALRAS(0.988)PPS(0.012)FPSGSPVLR	62.847	0.031392	19069000.0	862.91	803.23	1002.9	1176.5	867.48	923.81	825.7	1063.9	1021.2	1216.6	True	False	824.9775096192593	935.9501049244321	792.4049954394144	1073.358071634089	981.5688251279449	1102.3232080231442	1010.8842437351457	1026.48203397574	973.7246348958004	996.2619509049647	0.8280728867241016	0.9394618594780744	0.795378158043299	1.0773853911203706	0.9852517445199296	1.1064592068600407	1.0146771567627355	1.0303334710748762	0.9773781223013763	1.0	9.960381315184398	-7.265559430187273	24.999560146242978	1.029632371057381	0.862820055210852	0.7097426544825397	0.05061110546181887	179.8069659510441	1091030.175967673	0.013342658926812603	0.020634243823633585	5.425510019077798e-08	7.265559430187273	-0.1668123158465289	
GANDFMCDEMER	ddPTM_K562_Methotrexat_30min_R1	1	GANDFMCDEMER	12	0	F5GZ03;F5H282;E7EQR6;E7ERF2;P17987	F5GZ03	TCP1	T-complex protein 1 subunit alpha	0		84.18799999999999	0.014293	13065000.0	3189.2	2241.7	2619.7	2748.8	2797.0	2134.8	2545.3	4239.9	3636.8	4593.7	False	True	3049.006586640255	2612.1028226150656	2069.8607703187085	2507.81697178732	3164.854525617725	2547.319886651811	3116.148317281177	4090.7803138018016	3467.7259617989102	3761.7364161368855	0.810531693172546	0.6943875204572585	0.5502407774876348	0.6666647245749139	0.841328093069283	0.6771659693444925	0.8283802937158752	1.0874712795541448	0.9218418246752362	1.0	11.877183047809583	-9.028034968587372	3.8134642811259027	1.001787080328834	0.7045197640341796	0.712605874025587	0.08406576785083407	0.12711452479477753	3.975172370044957	0.042765767444185525	0.024996285076141687	9.374865192085485e-10	9.028034968587372	-0.2972673162946544	
GAPDPRVDDDS(ph)LGEFPVTNSR	ddPTM_K562_Methotrexat_30min_R1	3	GAPDPRVDDDSLGEFPVTNSR	21	1	J3KMZ8;Q92785;Q92785-2	J3KMZ8	DPF2	Zinc finger protein ubi-d4	1	GAPDPRVDDDS(0.972)LGEFPVT(0.023)NS(0.005)R;GAPDPRVDDDS(0.994)LGEFPVT(0.005)NS(0.001)R;GAPDPRVDDDS(0.998)LGEFPVT(0.001)NS(0.001)R	76.60600000000001	0.003118	219615000.0	9072.2	8569.0	8329.300000000001	12452.800000000001	8428.9	8760.4	9785.099999999999	8940.8	8659.1	11065.5	True	False	8673.39695074556	9984.881601904137	6581.093756619319	11361.08235821928	9537.448091161688	10453.223316012978	11979.657761139357	8626.346996306314	8256.540331008839	9061.430723112671	0.9571774276906	1.101910052287444	0.7262753485311272	1.2537846070202765	1.0525322526424945	1.1535952362743678	1.3220492576942917	0.9519850959411295	0.9111740279544568	1.0	13.145523142238149	-7.277383092248939	24.96884893860457	1.1006467904191093	0.945799815897963	0.2007900776745728	0.1477869021816968	1342.0130106333645	2101672.048888238	0.042443201943503324	0.06317794137165374	5.2797931442906734e-08	7.277383092248939	-0.15484697452114626	
GAPHAQTSGGCACGWRRSWRR	ddPTM_K562_Methotrexat_30min_R1	1	GAPHAQTSGGCACGWRRSWRR	21	3	K7ES49	K7ES49	FAM98C		0		54.974	0.022393	0.0	423.67	362.2	278.27	448.23	517.11	498.3	685.83	399.58	325.12	446.47	False	True	405.0459740881342	422.047393652664	219.86492978455067	408.93437182197	585.1190288674228	594.5894226712555	839.6448357525429	385.52654491590016	310.00524216345764	365.6099566172443	1.1078636310558012	1.1543651533935217	0.601364721625255	1.1184990026135473	1.6003913960143645	1.6262943935460954	2.2965589983414048	1.054474961466945	0.8479124721649771	1.0	8.514161549467012	-7.601782515297139	5.395497720340391	1.4599831745569323	0.9567823424455558	0.19185211049796813	0.41083828309954085	0.3184088973438829	15.97480427670129	0.1301723345760425	0.1696896849092969	2.5015977908002342e-08	7.601782515297139	-0.5032008321113765	
GAPHRHS(ph)MPELGLR	ddPTM_K562_Methotrexat_30min_R1	1	GAPHRHSMPELGLR	14	1	H0Y413;O43900-2;O43900	H0Y413	PRICKLE3	Prickle-like protein 3	1	GAPHRHS(1)MPELGLR	63.966	0.028049	31908000.0	1516.8	1542.9	1804.8	1792.0	1572.9	1404.5	1666.3	1647.5	1769.7	1915.3	True	False	1450.1232881650383	1797.8380001841379	1425.997144051307	1634.8981422594866	1779.7639196796983	1675.899747424801	2040.0101917595648	1589.5564911881113	1687.4270332697793	1568.4206103635365	0.9245755115580389	1.1462728736824146	0.9091930663425688	1.0423850155096734	1.1347491278294128	1.068526985906129	1.3006780058103935	1.0134759009700056	1.0758765997589503	1.0	10.615096789977796	-7.578112589013968	5.750211061027449	1.107330778406224	1.0034396202334597	0.18489519366250762	0.09824436407564481	0.3218062485704207	22.440288324091014	0.028451547999755137	0.037199456570702685	2.6417238127771695e-08	7.578112589013968	-0.1038911581727644	
GAPLIRVHS(ph)S(ph)PVSS(ph)PS(ph)VSGPRR	ddPTM_K562_Methotrexat_30min_R1	1	GAPLIRVHSSPVSSPSVSGPRR	22	2	Q8IXA5	Q8IXA5	SPACA3	Sperm acrosome membrane-associated protein 3;Sperm acrosome membrane-associated protein 3, membrane form;Sperm acrosome membrane-associated protein 3, processed form	4	GAPLIRVHS(0.999)S(0.999)PVS(0.05)S(0.88)PS(0.782)VS(0.29)GPRR	47.729	0.021488999999999998	60640000.0	2192.9	1840.1	2231.5	2064.2	1814.0	2431.9	2140.7	2337.6	2412.4	2425.0	True	False	2096.50274170432	2144.145248647892	1763.1386452518225	1883.2347908772497	2052.572795663408	2901.830256861784	2620.806467922764	2255.385283035707	2300.2480505509493	1985.8090012695532	1.0557423903124616	1.07973387535111	0.8878691979564124	0.9483463866229197	1.0336204510862688	1.4612836657536585	1.3197676444447823	1.135751364604456	1.1583430476346774	1.0	10.955511153161607	-8.027789982663261	24.2310012222909	1.2319922875872913	0.9915403094940516	0.427201591937016	0.12381414428861669	452.36030413288154	394426.7810595854	0.041908765946412393	0.042018914233471726	9.380155054190999e-09	8.027789982663261	-0.2404519780932397	
GAPPPPGT(ph)PPPSPMSSAIER	ddPTM_K562_Methotrexat_30min_R1	1	GAPPPPGTPPPSPMSSAIER	20	0	P25791-3	P25791-3			1	GAPPPPGT(0.693)PPPS(0.079)PMS(0.18)S(0.048)AIER	116.61	0.0014755	9991500.0	525.48	271.6	371.14	372.08	283.69	292.76	282.82	378.49	435.6	494.51	True	False	502.3805283919859	316.47728358935245	293.24278592819235	339.46032409146767	321.00020749820965	349.331726633026	346.2495843686254	365.17829216982585	415.3490510777624	404.9494471001266	1.240600603333504	0.7815229428158751	0.7241466509662526	0.838278275281936	0.7926920503211358	0.8626551514877147	0.8550439736321279	0.9017873583601486	1.0256812400957902	1.0	8.661598006487758	-9.638765523836254	3.431995326240729	1.0140745713081956	0.8578368013104627	0.14595182194720868	0.13246579775364992	0.4337586255674171	9.47308761140267	0.10768143199747383	0.03446782940746058	2.2973886765131604e-10	9.638765523836254	-0.15623776999773287	
GAPSPGVLGPHASEPQLAPPACTPAAPAVPGPPGPRS(ph)PQREPQR	ddPTM_K562_Methotrexat_30min_R1	2	GAPSPGVLGPHASEPQLAPPACTPAAPAVPGPPGPRSPQREPQR	44	2	O96013-3;O96013-4;O96013	O96013-3	PAK4	Serine/threonine-protein kinase PAK 4	1	GAPSPGVLGPHASEPQLAPPACT(0.156)PAAPAVPGPPGPRS(0.844)PQREPQR;GAPSPGVLGPHASEPQLAPPACT(0.035)PAAPAVPGPPGPRS(0.965)PQREPQR	81.80199999999999	4.8677999999999995e-14	32083000.0	1511.33	1359.22	1456.58	1429.35	1238.78	1353.1599999999999	1361.74	1378.2399999999998	1264.88	1402.0700000000002	True	False	1444.8937428154447	1583.808002210309	1150.8637633434464	1304.041104709039	1401.7012832480239	1614.6390190283687	1667.1448589849783	1329.7665180061308	1206.0760048834711	1148.1415366639194	1.2584630872372922	1.3794536227757055	1.002370985277161	1.1357842766477266	1.2208436316317381	1.406306598505199	1.4520377547084424	1.158190410800699	1.0504593435299694	1.0	10.165084785261614	-9.645199024183356	3.55051561580272	1.0211010640900038	1.2604393439868575	0.3635054889515372	0.1258978222462175	0.2927981767917982	6.780609179891858	0.11319992536032798	0.03633701981433368	2.2636067265439332e-10	9.645199024183356	0.23933827989685375	
GAPSS(ph)PATGVLPS(ph)PQGK	ddPTM_K562_Methotrexat_30min_R1	2	GAPSSPATGVLPSPQGK	17	0	Q5SRE5-2;Q5SRE5	Q5SRE5-2	NUP188	Nucleoporin NUP188 homolog	2	GAPS(0.036)S(0.952)PAT(0.013)GVLPS(1)PQGK;GAPS(0.051)S(0.9)PAT(0.049)GVLPS(1)PQGK	177.6	6.6317999999999985e-68	11420000.0	6722.3	4561.200000000001	8060.9	6225.3	4691.1	4797.299999999999	4397.9	5604.299999999999	5581.2	6593.5	True	False	6426.795741054743	5314.860772856242	6369.027248716297	5679.537614401777	5308.061875268256	5724.310329883236	5384.241026429449	5407.193592452523	5321.731230200197	5399.35325767868	1.1902899170219854	0.9843513693603437	1.1795907666642476	1.05189220696472	0.9830921634400205	1.0601844437095163	0.9972011034418355	1.001452087759343	0.9856238286746486	1.0	12.398570894194004	-3.000000000000517	0.2651953797557465	0.9831880968250652	2.1148852944288232	0.43229398794932794	0.056744186764322586	50.67744869387721	0.7038825627690835	0.06576327754258286	26.096886487727716	0.0009999999999988098	3.000000000000517	1.131697197603758	
GAPSS(ph)PATGVLPSPQGK	ddPTM_K562_Methotrexat_30min_R1	2	GAPSSPATGVLPSPQGK	17	0	Q5SRE5-2;Q5SRE5	Q5SRE5-2	NUP188	Nucleoporin NUP188 homolog	1	GAPS(0.001)S(0.991)PAT(0.008)GVLPSPQGK;GAPS(0.004)S(0.996)PATGVLPSPQGK	265.43	1.7348999999999998e-110	96116000.0	10685.6	8190.400000000001	13732.6	10837.2	8076.599999999999	7807.0	7082.6	9677.400000000001	9372.1	12085.599999999999	True	False	10215.873818576167	9543.7243870038	10850.314927082758	9887.119501838455	9138.814466072263	9315.592259270508	8671.053342229066	9337.040356797463	8936.39311663429	9896.780728141577	1.0322421097526437	0.9643261429311192	1.0963479160682825	0.9990238011158871	0.9234128467740998	0.9412749979174082	0.8761488791575279	0.9434421771361986	0.902959594853262	1.0	13.272743599466025	-7.671207360151919	4.195454408868602	0.9259647112286563	1.0274858098448734	0.535181071844512	0.042342837694812445	0.1595828254797278	5.179566233095773	0.012325922721341571	0.015961842324152285	2.1320267032471062e-08	7.671207360151919	0.10152109861621705	
GAPSSPAT(ph)GVLPSPQGK	ddPTM_K562_Methotrexat_30min_R1	1	GAPSSPATGVLPSPQGK	17	0	Q5SRE5-2;Q5SRE5	Q5SRE5-2	NUP188	Nucleoporin NUP188 homolog	1	GAPS(0.015)S(0.385)PAT(0.599)GVLPS(0.001)PQGK	153.41	6.193e-11	13075000.0	1501.9	1298.5	2058.2	1861.8	1024.8	997.29	1098.8	1132.3	1545.8	1660.4	True	False	1435.8782743242828	1513.0550542738383	1626.2119469671984	1698.578884630979	1159.5791626217538	1190.0021780770956	1345.233870674795	1092.47636720625	1473.9360953994603	1359.685470395038	1.056037080330871	1.112797839807938	1.196020684471038	1.2492439770923494	0.8528289724864486	0.8752040115066881	0.98937136563205	0.8034772680838062	1.0840272456329392	1.0	10.409057242916	-7.765129089671835	24.999999426121345	0.924138951086868	1.1536512404289296	0.5903029542265554	0.08929958829487933	63.5012294586724	430258.9027492226	0.02693263964308837	0.0317334677335198	1.7173978320300167e-08	7.765129089671835	0.22951228934206158	
GAPVNIS(ph)SSDLTGR	ddPTM_K562_Methotrexat_30min_R1	3	GAPVNISSSDLTGR	14	0	H7BYT1;P48730-2;P48730;J3KRM8	H7BYT1	CSNK1D	Casein kinase I isoform delta	1	GAPVNIS(0.754)S(0.226)S(0.02)DLTGR;GAPVNIS(0.571)S(0.051)S(0.126)DLT(0.251)GR;GAPVNIS(0.753)S(0.226)S(0.02)DLT(0.001)GR	172.42	2.6783e-05	328705000.0	3327.9700000000003	3102.21	3195.47	3107.87	3192.01	2844.2200000000003	3187.99	2977.85	4063.3999999999996	3745.9000000000005	True	False	3181.676423598763	3614.7974739459705	2524.784515681309	2835.4078623794603	3611.815264325004	3393.8252613888003	3902.9779098767203	2873.1173276385516	3874.493420912259	3067.4812114868523	1.0372276810316823	1.178425302300002	0.8230806781233746	0.9243440030738109	1.1774531008697866	1.1063882799607319	1.2723722301089142	0.9366373025789163	1.2630862762592883	1.0	11.582838791980501	-7.76643497710811	24.99999244435222	1.1291604738098717	0.992195638015636	0.209867063292544	0.1284356643957972	201.34338164158686	1007601.880842871	0.03914934822120499	0.045772874723275535	1.7122415155822146e-08	7.76643497710811	-0.13696483579423568	
GAPVNISSS(ph)DLTGR	ddPTM_K562_Methotrexat_30min_R1	2	GAPVNISSSDLTGR	14	0	H7BYT1;P48730-2;P48730;J3KRM8	H7BYT1	CSNK1D	Casein kinase I isoform delta	1	GAPVNIS(0.211)S(0.096)S(0.692)DLT(0.001)GR;GAPVNIS(0.176)S(0.179)S(0.645)DLTGR	123.72	0.00091114	62049000.0	2010.42	2136.06	2283.66	2385.45	2073.85	1952.33	2262.93	2764.65	2760.97	2263.86	True	False	1922.0443440089387	2489.007608188041	1804.3509740603965	2176.3213021500515	2346.597625295786	2329.590141609016	2770.4496568675936	2667.415692481462	2632.6131073328042	1853.8530167480785	1.0367835673296675	1.3426132415579062	0.9732977521731925	1.173944904201536	1.2657948629671039	1.2566207356047288	1.494427892523732	1.4388496112601676	1.420076502046954	1.0	10.856311148682316	-8.073379728985048	1.7412770070908445	1.3673982461600427	1.1346419131058512	0.23250636158679483	0.1573420175673358	0.4508831549869192	2.7389785343525577	0.05945167989892107	0.062188170027299254	8.445400916006336e-09	8.073379728985048	-0.23275633305419152	
GAQASSGS(ph)PALPR	ddPTM_K562_Methotrexat_30min_R1	2	GAQASSGSPALPR	13	0	P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5	P42684-2	ABL2	Abelson tyrosine-protein kinase 2	1	GAQAS(0.027)S(0.086)GS(0.888)PALPR;GAQAS(0.019)S(0.108)GS(0.873)PALPR	109.99	0.0020864	66109000.0	3373.7	3016.2	3752.3999999999996	3418.6	2923.7	3264.5	3230.1000000000004	3401.3	3430.3	4295.3	True	False	3225.3961875543177	3514.575783365999	2964.822519580075	3118.8966457189076	3308.217796406344	3895.318423259714	3954.532149314395	3281.6743511248083	3270.8261017264635	3517.3795476920054	0.9169883840573082	0.9992028826323716	0.8429066239170859	0.8867102919744416	0.9405347792441373	1.1074489887836245	1.1242836025214384	0.9329884098740895	0.9299042248291566	1.0	11.780285304023584	-8.021540453443953	21.718553204370586	1.021618484243055	0.9129236580847628	0.3568968660867544	0.06905889411793287	174.24147201588428	175682.08714683953	0.02471755608352485	0.025027268616713963	9.516112037827545e-09	8.021540453443953	-0.10869482615829207	
GAS(ph)PLGPGSAAGSGAAASGGLGLGLGGR	ddPTM_K562_Methotrexat_30min_R1	1	GASPLGPGSAAGSGAAASGGLGLGLGGR	28	0	B4E1M0;E9PPE2;A0A6I8PS01;Q6P1R3-3;Q6P1R3	B4E1M0	MSANTD2	Myb/SANT-like DNA-binding domain-containing protein 2	1	GAS(1)PLGPGSAAGSGAAASGGLGLGLGGR	100.39	1.0669e-08	0.0	869.5	1007.2	1382.0	1051.6	992.33	1115.9	1035.9	703.73	809.64	826.9	True	False	831.2778211099028	1173.6226805272313	1091.937086147443	959.4078607143277	1122.8387884898957	1331.531881916224	1268.2269445140337	678.9794170220391	772.0000131189155	677.1403971751726	1.227629934025123	1.73320434790663	1.612571175346617	1.416852198918704	1.6582067665347449	1.9664044376483476	1.8729157938364003	1.002715861960885	1.1400885493458504	1.0	9.403311180604097	-9.27193811870705	24.93856847533764	1.0535515853537425	1.6480997270303748	0.6468148876883718	0.20091749855745142	467.6365200457496	1110810.8239632694	0.11438234971450449	0.055870133209926426	5.346405332649707e-10	9.27193811870705	0.5945481416766323	
GASAATGIPLES(ph)DEDS(ph)NDNDNDIENENCMHTN	ddPTM_K562_Methotrexat_30min_R1	3	GASAATGIPLESDEDSNDNDNDIENENCMHTN	32	0	Q9Y4E8;Q9Y4E8-2;Q9Y4E8-3	Q9Y4E8	USP15	Ubiquitin carboxyl-terminal hydrolase 15	2	GASAATGIPLES(1)DEDS(1)NDNDNDIENENCMHTN;GASAAT(0.001)GIPLES(0.999)DEDS(1)NDNDNDIENENCMHTN;GAS(0.001)AAT(0.001)GIPLES(0.999)DEDS(1)NDNDNDIENENCMHTN	100.57	5.2451e-10	57830700.0	24006.1	21776.600000000002	25392.899999999998	25769.1	22041.6	21962.600000000002	22766.600000000002	25376.3	23821.0	26811.7	True	False	22950.820588092512	25374.813011089456	20063.277304510433	23509.96301210879	24940.456743602303	26206.561618221396	27872.58958873751	24483.80114557624	22713.566909374145	21955.841319314994	1.0453172918453466	1.1557203680811232	0.91380134392119	1.0707839736219356	1.1359371923344008	1.1936031617775884	1.2694840149084807	1.1151383720393966	1.034511343885172	1.0	14.422317197272763	-7.69380172777751	4.421353103045328	1.1414758061707717	1.042014377532569	0.14426743134198383	0.08991764318896112	0.35649693381188324	13.539446428456348	0.02797231867994061	0.03590686282651796	2.0239429760096236e-08	7.69380172777751	-0.09946142863820273	
GASDVGAGEPGPERAPLS(ph)PGR	ddPTM_K562_Methotrexat_30min_R1	2	GASDVGAGEPGPERAPLSPGR	21	1	A0A1B0GW05	A0A1B0GW05			1	GASDVGAGEPGPERAPLS(1)PGR;GASDVGAGEPGPERAPLS(1)PGR	82.709	0.0015523	43712000.0	1917.52	1574.5900000000001	2184.69	2396.93	1760.19	1795.3	1776.6100000000001	1755.4299999999998	1847.94	2223.55	True	False	1833.2281167736173	1834.7642340462405	1726.153424555324	2186.794868373903	1991.6858374855412	2142.216316519578	2175.0600172729764	1693.6905319128036	1762.0296727471075	1820.8435483599662	1.0068015554794951	1.0076451849467312	0.9479965624229881	1.2009790024758298	1.0938259024392583	1.1764966399496937	1.1945342691479743	0.9301680715173528	0.9676996545552569	1.0	10.830391252170786	-9.284629558010876	24.947072603766305	0.9617003811193503	1.0889146477706912	0.3237255969859083	0.08192129880948415	1044.7413397950372	1123883.9930154635	0.049096653528613636	0.0236083187749063	5.192427507621968e-10	9.284629558010876	0.12721426665134095	
GASGS(ph)EPQQMGSDVR	ddPTM_K562_Methotrexat_30min_R1	3	GASGSEPQQMGSDVR	15	0	H0Y7K5;A0A0A0MT54;P19544-7;H0Y3F0;J3KNN9;A0A1W2PQQ0;P19544-8	H0Y7K5;J3KNN9	WT1	Wilms tumor protein	1	GAS(0.044)GS(0.955)EPQQMGS(0.001)DVR;GAS(0.004)GS(0.963)EPQQMGS(0.033)DVR;GAS(0.021)GS(0.908)EPQQMGS(0.071)DVR	117.48	0.00075212	13363400.0	6847.099999999999	5826.7	7320.7	6694.7	5684.0	6154.000000000001	5158.5	6477.299999999999	7088.6	7226.400000000001	True	False	6546.109682486046	6789.463138034171	5784.185113284798	6107.786045192292	6431.545628749068	7343.173403810773	6315.424938001392	6249.489687631412	6759.052533218151	5917.628934752288	1.1062048253892531	1.1473282986977922	0.9774497821781595	1.0321340037600657	1.0868450353449362	1.240897914481716	1.0672221945031022	1.056080020653241	1.1421893139538473	1.0	12.530803519758226														
GASQAGMT(ph)GYGMPR	ddPTM_K562_Methotrexat_30min_R1	2	GASQAGMTGYGMPR	14	0	P37802;P37802-2;C9J5W6;Q9UI15	P37802	TAGLN2;TAGLN3	Transgelin-2;Transgelin-3	1	GASQAGMT(0.722)GY(0.278)GMPR;GASQAGMT(0.786)GY(0.214)GMPR	83.045	0.017472	16329700.0	2175.2799999999997	1832.21	2096.96	2228.0699999999997	1723.1100000000001	1349.8200000000002	1871.9699999999998	1738.62	1661.97	1846.6399999999999	True	False	2079.6572958067277	2134.951560254962	1656.836752653938	2032.7385624018384	1949.72916754993	1610.6536112986455	2291.8069247243325	1677.4717491408037	1584.7053774557123	1512.195601692539	1.37525680770335	1.4118223580768239	1.0956497630329753	1.3442299131981847	1.2893366211141453	1.0651093082772536	1.5155492597380962	1.1092954821871441	1.0479499977926243	1.0	10.562429048123343	-14.168462060419131	0.05248000482219317	3.000668151752834e-06	1.8511268450478038	0.34196910088237764	0.1400115587813463	422.5833618850709	2.3135435432603444	70.35037678850806	22.638087373348853	6.784813894419832e-15	14.168462060419131	1.851123844379652	
GASQAGMTGY(ph)GMPR	ddPTM_K562_Methotrexat_30min_R1	1	GASQAGMTGYGMPR	14	0	P37802;P37802-2;C9J5W6;Q9UI15	P37802	TAGLN2;TAGLN3	Transgelin-2;Transgelin-3	1	GASQAGMT(0.121)GY(0.879)GMPR	92.943	0.012941999999999999	4138000.0	737.7	697.5	654.68	839.63	658.85	735.72	714.54	681.27	598.16	739.8	True	False	705.271591297039	812.7500195271484	517.2716147315542	766.0209415096721	745.5003232760948	877.8874775189572	874.793784084427	657.3093479524877	570.3516721594907	605.8150511914287	1.1641698071218496	1.3415810946406006	0.8538441125129854	1.2644468637799173	1.230574119626037	1.4491014638749173	1.4439948006640149	1.085000028737793	0.94146170689851	1.0	9.242733611436387	-9.505197367388199	11.68276703617743	0.9847624494618306	1.246866374828898	0.3398093617907011	0.15897062984883611	0.9824702068722023	652.0245415422494	0.09800166583189664	0.04410170918349042	3.12465902684644e-10	9.505197367388199	0.2621039253670674	
GASS(ph)PYGAPGTPR	ddPTM_K562_Methotrexat_30min_R1	2	GASSPYGAPGTPR	13	0	Q5UIP0-2;Q5UIP0;H7BZN3	Q5UIP0-2	RIF1	Telomere-associated protein RIF1	1	GAS(0.499)S(0.501)PYGAPGTPR;GAS(0.292)S(0.708)PYGAPGTPR	128.21	0.00052823	10678400.0	3702.5	3890.2	5645.1	4358.9	4311.5	4117.8	3542.5	4480.6	4180.5	5187.700000000001	True	False	3539.7425332483235	4532.989427906112	4460.2706548559545	3976.762004628839	4878.537821666365	4913.506571695157	4336.995801661324	4323.0147583717435	3986.1494674715	4248.157260159203	0.833241877942077	1.0670484048267634	1.049930683283792	0.936114593008218	1.1483891774485622	1.1566206876981335	1.0209122534928923	1.0176211692807564	0.9383243659209818	1.0	12.052621458114045	-4.193828806543989	18.001342864666807	1.0250346243624384	0.42131575541522037	0.0	0.09371488327862884	0.0	0.0	0.02167876731750905	0.0	6.399870606667422e-05	4.193828806543989	-0.603718868947218	
GASSS(ph)PQRRQS(ph)PS(ph)PS(ph)TR	ddPTM_K562_Methotrexat_30min_R1	1	GASSSPQRRQSPSPSTR	17	2	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2	A9Z1X7	SRRM1	Serine/arginine repetitive matrix protein 1	4	GAS(0.05)S(0.05)S(0.901)PQRRQS(0.993)PS(0.669)PS(0.669)T(0.669)R	49.081	0.033462	0.0	275.38	217.11	363.13	290.43	336.9	261.24	186.59	160.31	207.16	191.03	True	False	263.2746249307015	252.98373726098794	286.9139754650657	264.9684528216644	381.2082551593178	311.72093272855477	228.43755727085	154.67180643542704	197.5291768165042	156.43261588145265	1.682990618338925	1.6172058226828054	1.8341058470983702	1.6938184618894445	2.4368847443438777	1.9926850354837913	1.4602936605238637	0.9887439749306501	1.2627109487588908	1.0	7.289397532756775	-8.983729449696357	3.692494290873837	1.1035293332165765	1.8772922731459099	0.7085404390073943	0.22855002875697672	0.13810848703896372	4.087294664398377	0.11841294756582776	0.07199209756688914	1.0381749611739371e-09	8.983729449696357	0.7737629399293333	
GATQQILDEAER	ddPTM_K562_Methotrexat_30min_R1	2	GATQQILDEAER	12	0	P78371-2;P78371;F8VQ14;F5GWF6	P78371-2	CCT2	T-complex protein 1 subunit beta	0	;	167.84	0.0022186999999999997	22366000.0	2681.5	2234.7	2508.8999999999996	2759.5	1938.3899999999999	1955.7	2290.8999999999996	2818.6	2794.3	3028.5	False	True	2563.624470737442	2603.946191594721	1982.3161761471197	2517.5789194001422	2193.32226096251	2333.611346414158	2804.692641362293	2719.4682404023124	2664.393602907695	2480.0093032349855	1.0337156668700342	1.0499743642889037	0.7993180402836947	1.0151489819478299	0.8844008198281701	0.9409687872421034	1.1309202097362228	1.0965556608416633	1.0743482290297033	1.0	11.276129817252384	-8.751315811404337	24.943034520225076	1.0835023306737814	0.9508828057265041	0.3781607198354857	0.07601044418179127	198.5046400873737	489087.9526504986	0.029316751582633933	0.022438560923400283	1.7728997900913024e-09	8.751315811404337	-0.13261952494727736	
GAVAAEGAS(ph)DTEREEPTESQGLAAR	ddPTM_K562_Methotrexat_30min_R1	2	GAVAAEGASDTEREEPTESQGLAAR	25	1	A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6	A0A0J9YX88	PHRF1	PHD and RING finger domain-containing protein 1	1	GAVAAEGAS(0.805)DT(0.141)EREEPT(0.027)ES(0.027)QGLAAR;GAVAAEGAS(0.496)DT(0.496)EREEPT(0.004)ES(0.004)QGLAAR	97.295	1.6339e-06	492020000.0	2761.8999999999996	2412.8	2914.2	3125.7	2567.7	2520.9	2961.0	2559.7	3093.6	3071.0	True	False	2640.490183005684	2811.4741894123335	2302.5492448993323	2851.6747339623194	2905.39755646358	3008.0282472646363	3625.0796241973667	2469.6739001482288	2949.7792112354564	2514.8121414015664	1.0499751212168373	1.117965888237453	0.9155949293357815	1.1339513942274078	1.1553139531306424	1.1961244332104222	1.4414912209613482	0.9820510484619416	1.1729620525815787	1.0	11.29623491817563	-7.501206671335675	19.93829834052044	1.170580225136527	1.0348430661966384	0.17122396091396486	0.12660306906256888	97.5191200271537	89715.69506534789	0.03590630753672518	0.05239574586673186	3.15350358220707e-08	7.501206671335675	-0.13573715893988858	
GAVAAEGASDT(ph)EREEPTESQGLAAR	ddPTM_K562_Methotrexat_30min_R1	2	GAVAAEGASDTEREEPTESQGLAAR	25	1	A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6	A0A0J9YX88	PHRF1	PHD and RING finger domain-containing protein 1	1	GAVAAEGAS(0.44)DT(0.56)EREEPTESQGLAAR;GAVAAEGAS(0.25)DT(0.749)EREEPT(0.001)ES(0.001)QGLAAR	106.0	1.0615000000000001e-06	448580000.0	5559.4	4243.7	5445.5	5077.9	4568.2	4384.3	4038.7999999999997	5274.4	5345.799999999999	5197.0	True	False	5315.015432637604	4944.8992944334905	4302.563967160565	4632.728390948351	5168.998371085769	5231.503924980107	4944.603710303386	5088.896362441621	5097.2749248197915	4255.77294004036	1.24889544332391	1.1619274251944924	1.0109947188864268	1.0885750852357308	1.214585092746219	1.2292723316508736	1.1618579703306477	1.195763127906293	1.197731880115637	1.0	12.055205464867658	-6.286106855422215	5.08100191540399	1.1458794984734915	1.2521210013103048	0.14911220992776109	0.07743923084301116	0.32183901356571804	24.215392940035713	0.02027319054494263	0.10997378908725595	5.174794937153276e-07	6.286106855422215	0.10624150283681333	
GCALQCAILS(ph)PAFK	ddPTM_K562_Methotrexat_30min_R1	2	GCALQCAILSPAFK	14	0	A0A087WTS8;D6RJ96;A0A087WYC1;A0A0A0MSM0;E9PDE8;Q92598-2;Q92598-3;O95757;P34932;Q92598;Q92598-4	A0A087WTS8	HSPA4;HSPA4L;HSPH1	Heat shock protein 105 kDa;Heat shock 70 kDa protein 4L;Heat shock 70 kDa protein 4	1	GCALQCAILS(1)PAFK;GCALQCAILS(1)PAFK	125.22	3.4214e-05	3975700.0	2559.1	1862.55	2878.3999999999996	2426.3999999999996	2045.99	1756.13	1704.46	2653.8	2684.3999999999996	3197.1	True	False	2446.605028179818	2170.3047295631404	2274.263175663385	2213.6812792290293	2315.0735469676815	2095.477268383851	2086.7285431473983	2560.46434981184	2559.602829919984	2618.0742094675816	0.9345056069580877	0.8289699053276642	0.8686778882886919	0.8455380184502903	0.8842658235568047	0.8003887975390861	0.7970471331948077	0.977995329755203	0.9776662634939257	1.0	11.354290275800672	-9.279182837940446	23.107210607949554	0.9833731851864733	0.8502315428752368	0.7186871627355538	0.03837398573877366	170.88300617865394	222537.19409696743	0.021044566523587577	0.0101560824071389	5.257958597750391e-10	9.279182837940446	-0.13314164231123649	
GCEIS(ph)PALFEAPRGY(ph)SMMGGQREAAT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	GCEISPALFEAPRGYSMMGGQREAATR	27	2	K7EKP0;Q86YJ7-2;Q86YJ7	K7EKP0	ANKRD13B	Ankyrin repeat domain-containing protein 13B	3	GCEIS(0.998)PALFEAPRGY(0.521)S(0.482)MMGGQREAAT(0.998)R	41.763000000000005	0.02099	14728000.0	0.0	0.0	57.707	0.0	99.42200000000001	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	45.59508931281512	0.0	112.49773566176812	0.0	0.0	0.0	0.0	0.0											0.0														
GCEIS(ph)PALFEAPRGYS(ph)MMGGQREAAT(ph)R	ddPTM_K562_Methotrexat_30min_R1	3	GCEISPALFEAPRGYSMMGGQREAATR	27	2	K7EKP0;Q86YJ7-2;Q86YJ7	K7EKP0	ANKRD13B	Ankyrin repeat domain-containing protein 13B	3	GCEIS(1)PALFEAPRGY(0.475)S(0.525)MMGGQREAAT(1)R;GCEIS(0.996)PALFEAPRGY(0.223)S(0.785)MMGGQREAAT(0.996)R;GCEIS(0.999)PALFEAPRGY(0.094)S(0.909)MMGGQREAAT(0.998)R	46.403	0.011068999999999999	394828000.0	0.0	64.321	191.32	49.17100000000001	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	74.94895197993648	151.16454654249551	44.86025477290247	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
GCES(ph)PDPDSSYALT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	GCESPDPDSSYALTPR	16	0	Q06413-5;Q06413-6;A0A0D9SGI5;A0A0D9SFD0;D6RC63;D6R942;A0A0D9SET2;D6RB91	Q06413-5	MEF2C	Myocyte-specific enhancer factor 2C	2	GCES(1)PDPDSSYALT(1)PR	214.81	1.0585999999999999e-21	11295000.0	2023.6	1700.3	1697.1	1776.1	1537.4	1689.3	1551.9	1625.8	1669.8	2156.4	True	False	1934.6449669902236	1981.2456748415905	1340.9019022437226	1620.392070573144	1739.5950474382166	2015.7333167139325	1899.9530796325212	1568.6196924877872	1592.1713624647552	1765.8550640567694	1.09558536618837	1.1219752488009949	0.7593499203514558	0.9176246134552813	0.9851290079502761	1.1415055276864614	1.0759394235151345	0.8883060248920626	0.9016432859483928	1.0	10.786151220543491	-9.2734547772306	0.006082211329478172	8.939077595214841e-05	1.9614335473244386	0.011852449432547263	0.11575460202498919	21664.16265695784	128.14059614846627	20609.932639296854	20699.671286369692	5.32776699085882e-10	9.2734547772306	1.9613441565484866	
GCES(ph)PDPDSSYALTPR	ddPTM_K562_Methotrexat_30min_R1	2	GCESPDPDSSYALTPR	16	0	Q06413-5;Q06413-6;A0A0D9SGI5;A0A0D9SFD0;D6RC63;D6R942;A0A0D9SET2;D6RB91	Q06413-5	MEF2C	Myocyte-specific enhancer factor 2C	1	GCES(0.774)PDPDS(0.069)S(0.157)YALTPR;GCES(0.886)PDPDS(0.076)S(0.038)YALTPR	194.67	3.7584e-11	21155200.0	1391.15	1838.76	2734.7	1788.96	1821.92	1541.6399999999999	1704.6399999999999	1986.4	1399.97	1549.91	True	False	1329.9967117159765	2142.5838364239994	2160.723841886696	1632.1246543395816	2061.5344144846063	1839.5401115129732	2086.948912729415	1916.5371860977623	1334.8857002693644	1269.206280065029	1.0478964157408934	1.6881289275642586	1.7024213288449763	1.2859412059133195	1.6242705751337612	1.4493625980315215	1.6442945055570386	1.51002813033636	1.0517484204387724	1.0	10.309710849539776	-9.776671275012735	5.799210582278287	1.0126610537464824	1.5093111330021967	0.48725057042023356	0.1917746140157568	0.12956597140508483	14.056483102683952	0.16005815753895206	0.046428322910327696	1.672355970456507e-10	9.776671275012735	0.49665007925571425	
GCWEVS(ph)PTER	ddPTM_K562_Methotrexat_30min_R1	2	GCWEVSPTER	10	0	Q8IZT6-2;Q8IZT6	Q8IZT6-2	ASPM	Abnormal spindle-like microcephaly-associated protein	1	GCWEVS(1)PTER;GCWEVS(0.815)PT(0.185)ER	160.91	2.7877e-06	43831000.0	4020.0	3228.4	3710.1	3560.2	3925.6	3317.0	3282.2	3518.0	3535.7	3585.4	True	False	3843.2856134120893	3761.838226582716	2931.4007115163736	3248.082793567088	4441.885207638521	3957.9633052389213	4018.316900554068	3394.269945978617	3371.326078731965	2936.0493167636523	1.3089989978943763	1.2812585282897475	0.9984167141809448	1.1062766469969871	1.5128782688618871	1.3480575011599956	1.36861355754861	1.1560670750994237	1.148252537681523	1.0	11.519660485967465	-9.892942151378548	1.7537334537412603	1.0090651134997441	1.2676273668551246	0.2780656011954027	0.1358192559166354	0.500856365753234	3.350557081346317	0.14242611412067843	0.04130076342343031	1.2795517308546295e-10	9.892942151378548	0.2585622533553804	
GCWEVSPT(ph)ER	ddPTM_K562_Methotrexat_30min_R1	1	GCWEVSPTER	10	0	Q8IZT6-2;Q8IZT6	Q8IZT6-2	ASPM	Abnormal spindle-like microcephaly-associated protein	1	GCWEVS(0.204)PT(0.796)ER	144.17	9.8285e-07	17815000.0	1191.9	1184.9	1495.1	1566.0	1483.8	1616.3	1461.5	1587.8	1535.9	1633.1	True	False	1139.5055031407628	1380.6845851436815	1181.2989417503925	1428.711211371851	1678.9457079412152	1928.6270998666491	1789.2785784412208	1531.9561740263923	1464.4963442386027	1337.329764937446	0.8520751822151087	1.0324189450821528	0.8833265905852683	1.0683312738789443	1.255446301996986	1.4421477412916635	1.337948668573091	1.1455335955212587	1.0950899192071035	1.0	10.385139540354196	-7.562985984340438	3.450479563370782	1.2369719415988503	0.9357713138094607	0.5126794143254583	0.12539652646443836	0.19159242438130308	4.748485351274403	0.03988477746977475	0.05513412339895882	2.735357001003921e-08	7.562985984340438	-0.3012006277893896	
GDAAS(ph)SPAPAASVGSSQGGAR	ddPTM_K562_Methotrexat_30min_R1	1	GDAASSPAPAASVGSSQGGAR	21	0	F8WCC1;E7EXA6;A0A0D9SF58;Q8WVB6;Q8WVB6-2	F8WCC1	CHTF18	Chromosome transmission fidelity protein 18 homolog	1	GDAAS(0.5)S(0.5)PAPAASVGSSQGGAR	268.82	3.2031999999999987e-123	30364000.0	2482.9	2399.1	2942.0	2511.0	2827.7	2549.8	2843.9	2887.7	3293.3	2951.3	True	False	2373.754688940515	2795.5104972725167	2324.51440480881	2290.8645285790008	3199.592113725147	3042.512763249384	3481.7169683400534	2786.1379542360573	3140.1952018236775	2416.7909713182817	0.982192799092471	1.1567034677176304	0.9618185570847537	0.9478951865371327	1.3239010537927791	1.2589060449815366	1.4406363684985504	1.152825373522605	1.2993242854225007	1.0	11.238876984210211	-7.763006026974583	24.99993326785808	1.2639573729429596	1.0188822750778823	0.46789346581850566	0.12113841904917307	34.82624268338325	555746.449097207	0.035532158347228116	0.04245326090244922	1.7258139416307836e-08	7.763006026974583	-0.2450750978650773	
GDAASS(ph)PAPAAS(ph)VGSSQGGAR	ddPTM_K562_Methotrexat_30min_R1	1	GDAASSPAPAASVGSSQGGAR	21	0	F8WCC1;E7EXA6;A0A0D9SF58;Q8WVB6;Q8WVB6-2	F8WCC1	CHTF18	Chromosome transmission fidelity protein 18 homolog	2	GDAAS(0.423)S(0.577)PAPAAS(0.691)VGS(0.254)S(0.056)QGGAR	147.49	4.6438e-16	5881600.0	2257.6	1576.1	1732.6	1889.9	1626.8	1648.1	1704.0	1702.1	2001.0	1725.1	True	False	2158.3586071739114	1836.5237358806273	1368.9509373799274	1724.2154012590418	1840.7527144350788	1966.5719998083428	2086.165376437795	1642.2361782405349	1907.9739467552852	1412.6676734392197	1.5278601243272345	1.3000394717106438	0.9690537718946584	1.220538583615594	1.303033083466589	1.3920981111011137	1.476755938896023	1.1625070843749241	1.3506176878176976	1.0	10.464206399823679	-12.25902422527514	3.4003165149905215	0.9991183555001136	1.2921040479113124	0.25974336831226774	0.1515126371164979	122704802.42066802	188970705.07121554	1132986.5610631679	0.04110278324801183	5.507769727918123e-13	12.25902422527514	0.29298569241119876	
GDAASS(ph)PAPAASVGSSQGGAR	ddPTM_K562_Methotrexat_30min_R1	1	GDAASSPAPAASVGSSQGGAR	21	0	F8WCC1;E7EXA6;A0A0D9SF58;Q8WVB6;Q8WVB6-2	F8WCC1	CHTF18	Chromosome transmission fidelity protein 18 homolog	1	GDAAS(0.006)S(0.994)PAPAASVGSSQGGAR	343.69	0.0	32972000.0	2951.3	2822.5	3507.2	3517.2	3124.7	3175.0	3312.8	3377.5	2941.1	3667.9	True	False	2821.5643857868395	3288.8701507030464	2771.0866487238136	3208.8525368052824	3535.6528195200954	3788.523814933248	4055.779729497142	3258.7114106147765	2804.3689029495094	3003.607767322306	0.9393917596311996	1.0949732473341718	0.9225860576310259	1.0683327469438364	1.17713532971454	1.2613244166400226	1.350302717159651	1.0849324089742562	0.9336668167726786	1.0	11.55248071233278	-7.557148128936834	4.50062396457893	1.1549603496866985	0.9956772407913235	0.22126256152166124	0.1210029693853368	0.29480780710235094	13.85082801998232	0.038277898661953504	0.051629360873014944	2.7723743433667457e-08	7.557148128936834	-0.159283108895375	
GDDGIFDDNFIEER	ddPTM_K562_Methotrexat_30min_R1	1	GDDGIFDDNFIEER	14	0	O60493-4;O60493;O60493-2	O60493-4	SNX3	Sorting nexin-3	0		180.09	0.00087032	6966400.0	1115.5	801.8	917.72	1047.2	858.85	827.99	719.76	1114.0	1064.0	1050.3	False	True	1066.4639556619861	934.2838217302763	725.1031133858403	955.3936018828882	971.8038288619177	987.9873491422301	881.1845019629504	1074.819988578789	1014.5348722376925	860.0804923849117	1.2399583121630802	1.0862748661344552	0.8430642478301147	1.1108188249144952	1.1298986983964827	1.1487149841088085	1.0245372494375724	1.2496737201868484	1.1795813080523374	1.0	9.748327873462053	-7.501637509325825	24.95694225782336	1.1300391796910054	1.0456708658635403	0.05980137880707981	0.11207240294066691	1852.5071363939346	2176565.5048361933	0.03237096403095381	0.047445911467976484	3.150376728178867e-08	7.501637509325825	-0.08436831382746512	
GDIAEGYSVS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	GDIAEGYSVSR	11	0	A0A5B3;A0A075B6N1	A0A5B3	TCRBV17S1A1T;TRBV19		1	GDIAEGY(0.002)S(0.007)VS(0.992)R	73.36	0.033558	3754000.0	1572.9	1781.7	1883.7	2113.6	1909.0	1807.1	1768.6	1949.0	1929.9	1832.6	True	False	1503.757199337281	2076.0956412781647	1488.3371122836022	1928.303969575698	2160.066960816673	2156.296499516809	2165.2535708731716	1880.4525652962827	1840.1793702363955	1500.6983817429216	1.0020382627392501	1.3834196574977131	0.9917629887459711	1.2849377283502845	1.4393744853032735	1.436862014212657	1.4428306162084557	1.253051637939605	1.2262153358886136	1.0	10.551418330315238	-7.502516893686436	23.671715244537015	1.3296390406602834	1.1493152071159325	0.17348858295598135	0.1621397700389517	609.4014866104092	708460.467521586	0.044369875138537906	0.06481739943487755	3.144004118790543e-08	7.502516893686436	-0.1803238335443509	
GDMS(ph)DEDDENEFFDAPEIITMPENLGHK	ddPTM_K562_Methotrexat_30min_R1	1	GDMSDEDDENEFFDAPEIITMPENLGHK	28	0	P22059	P22059	OSBP	Oxysterol-binding protein 1	1	GDMS(1)DEDDENEFFDAPEIITMPENLGHK	72.755	6.564e-05	8559400.0	464.48	460.19	869.91	520.3	528.66	473.99	180.92	616.94	534.27	847.82	True	False	444.06201535264853	536.2285756074531	687.3277790235327	474.68610681786356	598.1880563150036	565.5818592252627	221.4959154372805	595.2418705150792	509.4319043143158	694.2715824562277	0.6396085142670312	0.772361406051444	0.9899984334543422	0.6837181858120939	0.861605272966387	0.8146406586660507	0.3190335324595333	0.8573617091012188	0.7337645918215792	1.0	9.439356310819345	-4.246157262112169	19.118411984441742	0.7587472715083795	0.4960054727669288	0.0	0.18683941870737408	0.0	0.0	0.04210393667659748	0.0	5.673391293793949e-05	4.246157262112169	-0.2627417987414507	
GDMS(ph)DEDDENEFFDAPEIITMPENLGHKR	ddPTM_K562_Methotrexat_30min_R1	8	GDMSDEDDENEFFDAPEIITMPENLGHKR	29	1	P22059	P22059	OSBP	Oxysterol-binding protein 1	1	GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR	132.26	3.1797000000000005e-18	164492200.0	13701.620000000003	10391.229999999998	20171.52	14324.289999999999	11663.119999999999	10104.880000000001	9791.96	13908.09	14543.630000000001	19671.200000000004	True	False	13099.313190656547	12108.204136790086	15937.793612130885	13068.501735594948	13197.024710340582	12057.505047887458	11988.056290765166	13418.934591519552	13867.499815716426	16108.555062174704	0.8131898323652686	0.7516629573574827	0.9893993316355982	0.8112770937650232	0.8192556476607371	0.7485156180271118	0.7442043215232206	0.8330315499885658	0.8608779472889775	1.0	13.975539469613379	-10.186330637808483	2.1179722033273807	0.9997006895184608	0.8130396456932218	0.4170254582682509	0.06640788433093961	0.7402573686903745	5.947310113059173	0.06663177836873106	0.018377217595173228	6.511324840287645e-11	10.186330637808483	-0.18666104382523896	
GDNGESIY(ph)GPTFEDENFSVPHNK	ddPTM_K562_Methotrexat_30min_R1	1	GDNGESIYGPTFEDENFSVPHNK	23	0	H0Y7C3;Q8IXY8-3;Q8IXY8	H0Y7C3	PPIL6	Peptidyl-prolyl cis-trans isomerase-like 6	1	GDNGES(0.059)IY(0.7)GPT(0.235)FEDENFS(0.006)VPHNK	45.363	0.027763	19191000.0	1669.6	1367.6	2568.7	1752.0	1110.3	1371.8	998.15	1929.5	1595.6	1889.6	True	False	1596.2063831225921	1593.5726547746624	2029.5649733624716	1598.404880155481	1256.3239112596923	1636.8809352206072	1222.0105460630195	1861.6383913489897	1521.4209042692326	1547.3751294016286	1.0315574761369253	1.0298554141754226	1.311617935947637	1.032978267379537	0.811906490797428	1.0578436373431894	0.7897312828955524	1.2030944248592692	0.9832269340257314	1.0	10.59560727570955	-7.51516639714314	24.935734665602382	0.9742255638837896	1.1244620134420602	0.206654764218698	0.13157237786309872	547.4560041870799	1770049.6740939165	0.03796100423544025	0.05128617168032455	3.0537508640006244e-08	7.51516639714314	0.15023644955827065	
GDPEWS(ph)SETDALVGSR	ddPTM_K562_Methotrexat_30min_R1	2	GDPEWSSETDALVGSR	16	0	Q7Z7N9	Q7Z7N9	TMEM179B	Transmembrane protein 179B	1	GDPEWS(0.919)S(0.025)ET(0.057)DALVGSR;GDPEWS(0.639)S(0.343)ET(0.018)DALVGSR	136.34	4.0469e-06	23414100.0	2317.67	2070.48	2523.08	2526.76	2219.83	2308.96	2380.81	2521.6499999999996	2430.69	2728.74	True	False	2215.7880018997007	2412.5916278574477	1993.5199879282848	2305.242873847981	2511.77655402288	2755.133841804179	2914.767247580322	2432.962140215173	2317.68775244308	2234.5387439687756	0.9916086744435804	1.0796821645492847	0.8921393702879297	1.031641487564287	1.1240693681424834	1.2329765367642593	1.3044156228875177	1.0887983691408172	1.037210815296325	1.0	11.125761344050206	-7.736191587304361	3.6652287264791306	1.1512603002690298	0.9927860345634624	0.3192400438243057	0.09386640420816281	0.2568727052344546	7.309286506261201	0.030560342527459174	0.03837359144415405	1.835728340351839e-08	7.736191587304361	-0.15847426570556744	
GDPEWSSET(ph)DALVGSR	ddPTM_K562_Methotrexat_30min_R1	1	GDPEWSSETDALVGSR	16	0	Q7Z7N9	Q7Z7N9	TMEM179B	Transmembrane protein 179B	1	GDPEWS(0.037)S(0.236)ET(0.727)DALVGSR	162.46	7.4752e-41	0.0	1321.2	1290.5	1874.3	1960.5	1506.9	1666.9	1539.0	1557.0	1427.5	1825.8	True	False	1263.1216299602122	1503.7331902505869	1480.910043825002	1788.6260088726133	1705.0837628363777	1989.004833736136	1884.159926254558	1502.2394274839996	1361.135836578296	1495.1299276362683	0.8448239892817538	1.0057541906260414	0.9904891985984474	1.1963013888032785	1.1404251438749786	1.3303224000610177	1.2601981215327074	1.0047551050355679	0.9103796341834914	1.0	10.546055145548145	-6.643881016446866	1.432561979269209	1.133437154241297	0.841225292141604	0.30250240248398896	0.1240482268537401	0.8136986576387624	2.4972518970052953	0.040440812174361386	0.281645125944019	2.2704868113980559e-07	6.643881016446866	-0.2922118620996931	
GDPQQQSITHIAIPQEAYNAVHVS(ph)GSPTALAAVK	ddPTM_K562_Methotrexat_30min_R1	1	GDPQQQSITHIAIPQEAYNAVHVSGSPTALAAVK	34	0	Q2TAL8	Q2TAL8	QRICH1	Glutamine-rich protein 1	1	GDPQQQSITHIAIPQEAY(0.01)NAVHVS(0.497)GS(0.412)PT(0.082)ALAAVK	73.982	7.2529e-07	22691000.0	2694.8	2526.2	3401.5	2662.7	2561.8	2495.6	2186.2	3250.5	2807.1	3496.6	True	False	2576.339818662412	2943.6116119419075	2687.571634247848	2429.265225108447	2898.721603048798	2977.8393803298954	2676.511001155112	3136.1780725990616	2676.59853370153	2863.3318572532467	0.8997698999283507	1.0280371813994595	0.9386168869807487	0.8484050561428134	1.0123596381976836	1.0399910065564297	0.9347540329197646	1.0952897634462644	0.9347846030914323	1.0	11.483479171579186														
GDQCCYSHS(ph)PPTPR	ddPTM_K562_Methotrexat_30min_R1	2	GDQCCYSHSPPTPR	14	0	Q9NXH9-2;Q9NXH9	Q9NXH9-2	TRMT1	tRNA (guanine(26)-N(2))-dimethyltransferase	1	GDQCCYS(0.014)HS(0.98)PPT(0.006)PR;GDQCCYS(0.002)HS(0.902)PPT(0.096)PR	116.61	0.00098924	90034000.0	2273.36	2022.43	2381.5	2169.23	1909.5900000000001	2132.7	2247.5	2291.85	2370.75	2679.9	True	False	2173.425816444405	2356.6021820677984	1881.655695123109	1979.056973846845	2160.734556158151	2544.814091372643	2751.559086586823	2211.244336467055	2260.5343499600654	2194.544141238052	0.9903768967792405	1.0738458788704617	0.8574244007056395	0.9018077771406139	0.9845938003959095	1.159609434849183	1.2538180640260583	1.0076098698199716	1.0300701213896681	1.0	11.099705573636028	-8.124644300859218	5.6529488189590404	1.1002814979349442	0.9557878352448315	0.34511973641118787	0.08861062852526064	0.27161747044271045	11.41522145663156	0.031575314006823146	0.03169154231820696	7.505086449268407e-09	8.124644300859218	-0.14449366269011277	
GDQCCYSHSPPT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	GDQCCYSHSPPTPR	14	0	Q9NXH9-2;Q9NXH9	Q9NXH9-2	TRMT1	tRNA (guanine(26)-N(2))-dimethyltransferase	1	GDQCCYSHSPPT(1)PR;GDQCCYSHS(0.01)PPT(0.99)PR	153.23	2.9261e-08	7851000.0	1408.3700000000001	1545.62	1372.91	2202.2200000000003	1441.42	1457.22	1679.28	1784.02	1589.5100000000002	1679.86	True	False	1346.4597411346226	1801.007433952044	1084.7549529252426	2009.1547917671244	1630.9919951075792	1738.8071412904014	2055.9012871739806	1721.2750054078383	1515.614027039977	1375.6210758237814	0.9788013318480921	1.3092322192530548	0.7885565087577946	1.4605437697034087	1.1856404527175992	1.2640160665240814	1.4945258714815908	1.25127117900332	1.1017670881004507	1.0	10.4258674092695	-6.246543419494031	22.992036184866542	1.21910041087952	0.9788007986598833	0.102650090892634	0.19839101177271218	1970.6548611565531	3041564.5163057833	0.0484752515280056	0.9622893061155088	5.668348981924265e-07	6.246543419494031	-0.2402996122196367	
GDQVDWS(ph)RLY(ph)RDTGLVKMS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	GDQVDWSRLYRDTGLVKMSR	20	3	Q6PB30-2;Q6PB30	Q6PB30-2	CSAG1	Putative chondrosarcoma-associated gene 1 protein	3	GDQVDWS(0.997)RLY(0.937)RDT(0.067)GLVKMS(0.998)R	43.494	0.032766	0.0	115.39	137.32	0.0	212.07	160.95	54.09	190.77	223.65	0.0	206.0	True	False	110.31759376408476	160.00979595909382	0.0	193.47815235991598	182.11774612019042	64.54212697629586	233.55502867549203	215.78410273397327	0.0	168.6914038191868	0.6539609681731592	0.94853556456618	0.0	1.1469354571694539	1.0795911468932629	0.3826047179349805	1.384510552332766	1.2791647816581284	0.0	1.0	7.398242648382974														
GDRSEDFGVNEDLADSDAR	ddPTM_K562_Methotrexat_30min_R1	3	GDRSEDFGVNEDLADSDAR	19	1	P04083	P04083	ANXA1	Annexin A1	0	;;	172.95	1.7019e-12	347365000.0	6738.3	5178.0	7259.3	7033.5	5647.9	5557.3	5853.400000000001	7280.0	7365.0	7807.2	False	True	6442.092400212601	6033.576489048851	5735.672134204151	6416.88397521323	6390.697845990828	6631.169573772764	7166.1739521367335	7023.958273656716	7022.602757547566	6393.240426685221	1.0076411913625951	0.9437430921360095	0.8971463219596127	1.0036982104457266	0.9996023017242116	1.0372157358722869	1.1208985543896188	1.0986538601518716	1.0984418368243127	1.0	12.642331634074681	-8.145971811774857	1.4908099676156479	1.0866642748354534	0.9540190599685573	0.605172995554023	0.04212971430216688	0.24796259924305983	1.109362146071256	0.018016064608969103	0.017878584101245477	7.1454270252690915e-09	8.145971811774857	-0.13264521486689607	
GDRWEDLSR	ddPTM_K562_Methotrexat_30min_R1	2	GDRWEDLSR	9	1	H0Y580;Q9NR50-3;Q9NR50-2;Q9NR50	H0Y580	EIF2B3	Translation initiation factor eIF-2B subunit gamma	0	;	94.40899999999999	0.009260299999999999	13987000.0	3709.8	3358.2	3731.7999999999997	3912.0	3402.2000000000003	3598.3	3147.36	3997.0	4445.799999999999	4522.1	False	True	3546.7216339890947	3913.085470359956	2948.5461780644205	3569.0410337718254	3849.6489335204237	4293.620549062774	3853.2355981134147	3856.4232444788345	4239.115728378133	3703.1038699550722	0.9577699569178234	1.056704215646922	0.796236422636504	0.9637971709972928	1.0395735763056329	1.1594653295844133	1.040542132608385	1.0414029365386455	1.1447466442332237	1.0	11.854519301513628	-7.806746406138581	3.696519527862494	1.0789794820142629	0.9394759843730068	0.42111572041140577	0.07420638908674744	0.2202886002308468	6.220676106064615	0.023533226439037984	0.02815879628803427	1.5604634249055095e-08	7.806746406138581	-0.13950349764125602	
GDS(ph)ES(ph)EEDEQDSEEVR	ddPTM_K562_Methotrexat_30min_R1	2	GDSESEEDEQDSEEVR	16	0	Q9NZ63	Q9NZ63	C9orf78	Uncharacterized protein C9orf78	2	GDS(1)ES(0.578)EEDEQDS(0.422)EEVR;GDS(1)ES(0.848)EEDEQDS(0.152)EEVR	181.81	2.9575999999999995e-67	13151000.0	5271.9	4372.8	6281.0	5047.0	5295.6	4447.6	4352.2	5667.200000000001	5567.0	6155.0	True	False	5040.153588394822	5095.33087510869	4962.7039349436245	4604.537345973006	5992.0642209013995	5307.0357541093235	5328.291638105973	5467.881363800463	5308.191385100788	5040.269856830556	0.9999769321010508	1.0109242202981483	0.9846107601199539	0.9135497655414131	1.1888379771533413	1.0529269076569874	1.057144119155662	1.084839010433223	1.0531561872440511	1.0	12.299285262571575	-7.7426615496350415	24.999995627623203	1.0752811777582958	0.9801943126549848	0.4587586100679414	0.05076284520964723	223.85297090096745	298027.23255003267	0.014705987766044407	0.018951960082256768	1.8085830251755248e-08	7.7426615496350415	-0.09508686510331099	
GDS(ph)LKEPTSIAESSR	ddPTM_K562_Methotrexat_30min_R1	1	GDSLKEPTSIAESSR	15	1	Q9C0B5-2;Q9C0B5;H0YEF4	Q9C0B5-2;H0YEF4	ZDHHC5	Palmitoyltransferase ZDHHC5;Palmitoyltransferase	1	GDS(0.999)LKEPTS(0.001)IAESSR	95.073	0.014161000000000002	20213000.0	970.38	998.06	1611.4	1197.4	820.97	779.51	540.39	1071.5	1264.7	1312.5	True	False	927.7232571002048	1162.9724508806676	1273.1891610839289	1092.425801083432	928.941944903962	930.1392752688555	661.586213481937	1033.8147376680188	1205.904373044183	1074.793531614964	0.8631641611261149	1.0820426590521137	1.1845895268562507	1.0164052619873643	0.8642980419766314	0.8654120516256236	0.6155472600284916	0.9618728688426592	1.121987002687125	1.0	10.069843828640602														
GDSIEEILADS(ph)EDEEDNEEEERSR	ddPTM_K562_Methotrexat_30min_R1	2	GDSIEEILADSEDEEDNEEEERSR	24	1	Q5JTH9-2;Q5JTH9-3;Q5JTH9	Q5JTH9-2	RRP12	RRP12-like protein	1	GDSIEEILADS(1)EDEEDNEEEERSR;GDSIEEILADS(1)EDEEDNEEEERSR	143.23	2.1378e-17	201469000.0	3138.8999999999996	3449.5	4058.3	3680.0	3254.5	3289.4	3043.8999999999996	4189.200000000001	3584.2	3523.5	True	False	3000.917714412737	4019.4712435253027	3206.518289950919	3357.3801135685903	3682.5237946452908	3925.029995855567	3726.5720594712457	4041.8634615388364	3417.5713243179885	2885.3600065869164	1.0400496671340895	1.3930571001016692	1.1113061394872177	1.1635914083178913	1.2762787957962087	1.360325916660387	1.2915449202054328	1.4008177323840931	1.184452309769353	1.0	11.494535619933108	-6.232601883792767	23.099986722493107	1.2546246116724618	1.0400487545762251	0.18916940865204057	0.12333930689688759	5962.062487849859	4775638.455210063	0.02976358109109801	2.613545372639914	5.853264049192505e-07	6.232601883792767	-0.2145758570962366	
GDTVSAS(ph)PCSAPLAR	ddPTM_K562_Methotrexat_30min_R1	1	GDTVSASPCSAPLAR	15	0	Q15477	Q15477	SKIV2L	Helicase SKI2W	1	GDT(0.001)VS(0.004)AS(0.962)PCS(0.033)APLAR	123.76	0.00054307	10638000.0	911.26	841.57	953.46	865.8	972.45	1044.5	867.75	995.97	1021.6	755.95	True	False	871.2021015119152	980.6251382558601	753.3417758018385	789.8966582412188	1100.3442200346637	1246.3348424244964	1062.3650266454795	960.9411705788302	974.1060389831084	619.0401296947298	1.4073434979757051	1.584105926605179	1.216951437660976	1.276002346779593	1.7775006292036055	2.013334487764319	1.7161488822531887	1.5523083633571604	1.573574946528061	1.0	9.273889125926704	-6.252500318670581	21.414345454532793	1.5525633433801858	1.4073429737042003	0.005586029328176312	0.28027685331195545	865.1109292853218	2072082.2890982064	0.07318606785375029	0.763694951093686	5.591131173121416e-07	6.252500318670581	-0.1452203696759855	
GDVEGSQS(ph)QDEGEGSGESER	ddPTM_K562_Methotrexat_30min_R1	1	GDVEGSQSQDEGEGSGESER	20	0	Q9UQE7	Q9UQE7	SMC3	Structural maintenance of chromosomes protein 3	1	GDVEGSQS(1)QDEGEGSGESER	285.76	3.126099999999999e-156	3776000.0	644.25	742.78	827.09	826.45	715.58	768.09	737.04	683.46	698.32	989.46	True	False	615.9295414031682	865.5117698987458	653.4951118536102	753.9964116464024	809.6913126355139	916.5125218935679	902.3399818366859	659.4223244111847	665.8552556212646	810.2592059365656	0.7601635833205068	1.0681912202383614	0.8065259944788231	0.9305619808106592	0.9992991214454696	1.131134969129028	1.11364360346105	0.8138411999268419	0.8217805496595539	1.0	9.662239696905104	-6.240517901538954	23.40195254824138	0.9640607066632194	0.7601630956196468	0.22185985660450058	0.11507141203046384	3662.8699096731407	4096994.408993292	0.030778870487502417	1.188494586099526	5.747541270974516e-07	6.240517901538954	-0.20389761104357262	
GDVTAEEAAGAS(ph)PAK	ddPTM_K562_Methotrexat_30min_R1	4	GDVTAEEAAGASPAK	15	0	P49006	P49006	MARCKSL1	MARCKS-related protein	1	GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK	196.8	6.790000000000001e-09	257541000.0	10433.8	8060.0	12991.000000000002	10213.1	8436.5	7640.4	7906.1	9902.699999999999	9936.0	12489.800000000001	True	False	9975.142645079366	9391.778003424819	10264.366632519132	9317.7333798607	9546.047624373949	9116.799167123141	9679.244179961774	9554.416428096207	9474.077528715905	10227.776191363493	0.9752992692099134	0.9182619787237225	1.0035775559096156	0.9110224163615108	0.9333453769192557	0.8913764826826696	0.9463683990401639	0.9341636196697497	0.926308647300669	1.0	13.320204875908177	-12.931067518982656	2.525684040664652	1.0422039717042944	0.936979031113508	0.2739338737864997	0.03038193192351358	33388402.146676566	17226132.542772636	8310451.405528017	0.00738350317969676	1.172013140606591e-13	12.931067518982656	-0.10522494059078635	
GDVTAEEAAGAS(ph)PAKANGQENGHVK	ddPTM_K562_Methotrexat_30min_R1	2	GDVTAEEAAGASPAKANGQENGHVK	25	1	P49006	P49006	MARCKSL1	MARCKS-related protein	1	GDVTAEEAAGAS(1)PAKANGQENGHVK;GDVTAEEAAGAS(1)PAKANGQENGHVK	78.976	0.00061997	78709000.0	5326.9	4060.3999999999996	9240.9	6380.299999999999	4022.5	3210.1000000000004	3423.8	4805.2	4759.0	7959.7	True	False	5092.7358542499605	4731.312085000764	7301.36137437041	5820.949005054797	4551.529256094847	3830.406393170778	4191.674305074956	4636.198392386711	4537.755128739831	6518.121198930004	0.7813196009742761	0.7258705293447815	1.1201634875351782	0.8930409281144309	0.6982885278110529	0.5876549815918684	0.6430801418302944	0.711278334798036	0.6961753226504497	1.0	12.670240462677448	-7.762875187584116	24.131875965383745	0.6975722344499541	0.8862298650245549	0.21867504341391908	0.14078234251496	32.28537633262823	542633.5855380377	0.04290441325909226	0.05133910591513065	1.726333953905701e-08	7.762875187584116	0.18865763057460083	
GEAVLRPGLDAEPELS(ph)PEEQR	ddPTM_K562_Methotrexat_30min_R1	3	GEAVLRPGLDAEPELSPEEQR	21	1	C9JQV0;Q9BRJ6	C9JQV0	C7orf50	Uncharacterized protein C7orf50	1	GEAVLRPGLDAEPELS(1)PEEQR;GEAVLRPGLDAEPELS(1)PEEQR;GEAVLRPGLDAEPELS(1)PEEQR	85.913	0.0010983	30226700.0	1263.79	1196.17	1414.34	1357.1	1655.73	1403.3	1340.98	1680.46	1464.0	1449.72	True	False	1208.235304819419	1393.816761086436	1117.4893620996927	1238.1251500336778	1873.4875165180665	1674.467864408134	1641.728900525561	1621.3572693062042	1395.9389595450966	1187.1616599259785	1.0177512849385268	1.1740749454234756	0.9413118700020771	1.042928854450098	1.5781233337967482	1.4104800727076545	1.382902561583673	1.3657426145376852	1.1758625692411055	1.0	10.213300689813098	-7.725934063188526	24.95401275666589	1.3449229268272513	1.0459701903055718	0.4285432329450424	0.1537137260045024	152.58313499473056	107238.56149367441	0.04417268690151201	0.05702458879793836	1.8796021659639926e-08	7.725934063188526	-0.29895273652167953	
GEDVPS(ph)EEEEEEENGFEDR	ddPTM_K562_Methotrexat_30min_R1	2	GEDVPSEEEEEEENGFEDR	19	0	Q9ULX3	Q9ULX3	NOB1	RNA-binding protein NOB1	1	GEDVPS(1)EEEEEEENGFEDR;GEDVPS(1)EEEEEEENGFEDR	294.29	5.161199999999998e-178	33872000.0	5266.0	4300.0	5557.1	4278.3	4939.1	4525.8	4387.8	6527.4	5915.3	6100.9	True	False	5034.51294533036	5010.501912497115	4390.740652264801	3903.228081489264	5588.678222194673	5400.346797362169	5371.875844327325	6297.827642234463	5640.29899412371	4995.967891070272	1.0077152325836567	1.002909150287539	0.8788568597714075	0.7812756540060721	1.118637738281666	1.0809410538876116	1.0752422676552715	1.2605820893066824	1.1289702250098739	1.0	12.286548489481747	-7.793505505036494	24.01640369189505	1.1204945009483707	0.9210026826331392	0.5476627372580342	0.08564965885735502	98.35993025424838	73667.41065735153	0.028047075039535053	0.03180577491186184	1.608771985263541e-08	7.793505505036494	-0.19949181831523144	
GEEGS(ph)DDDETENGPKPK	ddPTM_K562_Methotrexat_30min_R1	2	GEEGSDDDETENGPKPK	17	1	Q6PD62	Q6PD62	CTR9	RNA polymerase-associated protein CTR9 homolog	1	GEEGS(0.985)DDDET(0.015)ENGPKPK;GEEGS(0.998)DDDET(0.002)ENGPKPK	82.367	0.0095008	28933000.0	2817.5	2089.7	4117.8	2426.7	2141.8	2582.34	2165.42	2819.2	2681.9	3170.6000000000004	True	False	2693.6460735792425	2434.9874061733067	3253.5300530665263	2213.9549786948096	2423.4842413185706	3081.340657718024	2651.0705571865797	2720.0471380622275	2557.219054374314	2596.373616257834	1.0374647380147115	0.9378416846196681	1.2531054978735514	0.8527104746526403	0.9334112109841689	1.1867863078038727	1.0210666679811593	1.0476331761461375	0.9849195194257314	1.0	11.342282285695067	-8.803369275499204	0.003127282995563756	0.5066571748963569	1.5468191180346993	0.0026879203889624836	0.11244865386045143	407106.79115092126	804.9261705006215	133256.60591707702	134450.48787232884	1.5726450941414348e-09	8.803369275499204	1.0401619431383424	
GEFSAS(ph)PMLK	ddPTM_K562_Methotrexat_30min_R1	3	GEFSASPMLK	10	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	GEFS(0.023)AS(0.977)PMLK;GEFS(0.059)AS(0.941)PMLK;GEFS(0.073)AS(0.927)PMLK	122.7	0.0032871000000000003	1682190000.0	22458.300000000003	16884.7	29323.6	23596.6	17105.3	14953.2	16280.8	20361.3	20169.6	23328.9	True	False	21471.060022809135	19674.609684172086	23168.97709070418	21527.922714084947	19354.946770485814	17842.694270696004	19932.183838443943	19645.181538105287	19231.919698388516	19103.810148337023	1.1239150649054257	1.0298788320969967	1.2127935166232284	1.126891575393872	1.013145891850828	0.933986159418005	1.0433617002930187	1.028338398757349	1.006705968550606	1.0	14.22157278398394	-7.777860290588343	6.781951961733191	1.0036948526721368	1.1233136186581472	0.5881459799965654	0.048854341516798495	0.11475586702650506	21.964400680892915	0.015455312246533199	0.01823718564756425	1.6677836402673954e-08	7.777860290588343	0.1196187659860104	
GEGDAPFSEPGTTSTQRPS(ph)SPETATK	ddPTM_K562_Methotrexat_30min_R1	2	GEGDAPFSEPGTTSTQRPSSPETATK	26	1	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	GEGDAPFS(0.001)EPGT(0.061)T(0.165)S(0.165)T(0.165)QRPS(0.215)S(0.215)PET(0.014)AT(0.001)K;GEGDAPFS(0.005)EPGT(0.077)T(0.077)S(0.077)T(0.077)QRPS(0.339)S(0.339)PET(0.007)ATK	77.149	0.00038639	293800000.0	6948.200000000001	5338.2	8983.0	6031.2	5013.6	5040.4	4084.4	5881.6	6768.5	7181.7	True	False	6642.765447539768	6220.24681611444	7097.591059958383	5502.454060042086	5672.976278025392	6014.385964343159	5000.4306710813	5674.7407942773825	6453.833912350403	5881.024537904145	1.1295252051281337	1.0576808132705369	1.2068630243273553	0.9356284818364365	0.9646238068659894	1.0226765635102315	0.8502652282527854	0.9649238423854158	1.0973995892644912	1.0	12.521851794655007	-7.272560161484868	24.99726697521455	0.9712100788998441	1.1239887962773603	0.5171966717674306	0.06831808093826927	567.2869050167293	1275144.535368643	0.01926425310412863	0.02888220310474182	5.3387531233906905e-08	7.272560161484868	0.15277871737751614	
GEGDAPFSEPGTTSTQRPSS(ph)PETATK	ddPTM_K562_Methotrexat_30min_R1	1	GEGDAPFSEPGTTSTQRPSSPETATK	26	1	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	GEGDAPFS(0.004)EPGT(0.045)T(0.015)S(0.015)T(0.015)QRPS(0.209)S(0.617)PET(0.071)AT(0.01)K	86.141	0.0001816	201660000.0	2935.0	2075.9	4088.3	2322.9	2498.9	1918.6	1980.4	2674.6	2207.6	2938.2	True	False	2805.980914269769	2418.907190733199	3230.221699925177	2119.254963534912	2827.5491505420573	2289.342296482183	2424.555112381111	2580.532802022288	2104.9691578495604	2406.063508259878	1.166212323422469	1.005338047989685	1.3425338478539786	0.8807976000050004	1.175176441035427	0.9514887236446595	1.0076854181353703	1.0725123394139293	0.8748601816300036	1.0	11.232459007742316	-7.8166281662006565	0.8603472198513373	0.983264022524687	1.1425993544754003	0.2157060821075677	0.12223117046737919	1.029300433633078	1.6613214781646433	0.06155431764331058	0.09504281245327698	1.5253581744613764e-08	7.8166281662006565	0.15933533195071325	
GEGLNKT(ph)VIGDYLGER	ddPTM_K562_Methotrexat_30min_R1	1	GEGLNKTVIGDYLGER	16	1	O43739-2;O43739	O43739-2	CYTH3	Cytohesin-3	1	GEGLNKT(0.916)VIGDY(0.084)LGER	88.10799999999999	0.009067299999999999	0.0	1253.1	663.16	1261.4	1215.8	856.03	929.52	825.49	976.68	1067.9	1725.0	True	False	1198.0152244195733	772.7359182073452	996.6493780509292	1109.2127016512745	968.6129494331566	1109.1365847107877	1010.6271458894578	942.3296108125056	1018.2535620889404	1412.5857844082386	0.8481008641336757	0.5470364538115894	0.7055496303670125	0.7852356394170755	0.6857020367360759	0.7851817545901667	0.7154447942521455	0.6670954933949494	0.7208436990717048	1.0	10.464122767752649	-12.600949236029209	2.376471987691062	1.0322062654985793	0.7138769518701232	0.5474657964035501	0.07689662874877745	2610610.041293684	2100702.2130659022	522525.2152490774	0.01916669078167813	2.5064022051597235e-13	12.600949236029209	-0.31832931362845607	
GEGPAIPGDT(ph)PPPTPR	ddPTM_K562_Methotrexat_30min_R1	1	GEGPAIPGDTPPPTPR	16	0	O75145-2;O75145	O75145-2	PPFIA3	Liprin-alpha-3	1	GEGPAIPGDT(1)PPPTPR	172.26	6.056800000000001e-07	37323000.0	3221.0	2743.4	3539.8	3174.0	3421.8	3388.8	2851.6	3511.6	3017.4	3357.9	True	False	3079.4086967165	3196.7002201731593	2796.8443542291734	2895.740347952909	3871.826677067834	4043.6376390695423	3491.1438893486034	3388.0950376061714	2877.121732603398	2749.751771283726	1.1198860671262967	1.1625413804827824	1.017126121505674	1.0530915474603104	1.4080640723654358	1.470546425789468	1.2696214712205667	1.232145778753125	1.0463205306929246	1.0	11.425085672571486	-7.735555610510268	24.99975003627555	1.2626204827790954	1.0884001369720193	0.20505844150833685	0.13926054196510687	328.4271268035232	317208.8406606768	0.04290966594438695	0.055376716298257925	1.8384185331005425e-08	7.735555610510268	-0.17422034580707613	
GEGPGEAGGPLT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	GEGPGEAGGPLTPR	14	0	P50548;P50548-2	P50548	ERF	ETS domain-containing transcription factor ERF	1	GEGPGEAGGPLT(1)PR	138.55	4.8936e-05	36522000.0	1303.6	947.73	1222.3	1196.5	1033.7	855.69	1177.6	1274.6	1288.9	1204.9	True	False	1246.2953048865659	1104.3262738443932	965.7559337178143	1091.6047026860922	1169.6496686203218	1021.0399821103084	1441.7067765804863	1229.7715955498422	1228.9793203262805	986.6809342802829	1.2631188681026395	1.1192334172849145	0.9787925358284824	1.1063401194453444	1.185438603284153	1.0348228557340962	1.461168171484041	1.2463721075616785	1.24556913752746	1.0	9.946439821619398	-8.717422242860989	24.999991549128776	1.2588105294243181	1.1115020096013768	0.17901037670890618	0.12660729724832698	192.02944588968577	109064.74473419755	0.04701404459885831	0.03641674330085476	1.9168042212985044e-09	8.717422242860989	-0.14730851982294135	
GEHGFIGCR	ddPTM_K562_Methotrexat_30min_R1	2	GEHGFIGCR	9	0	Q16658;C9JPH9;C9JFC0;A0A0A0MSB2	Q16658	FSCN1	Fascin	0	;	124.92	0.0024695999999999997	1998200.0	1220.04	950.51	1061.37	1361.15	1188.97	989.69	1088.71	1277.3899999999999	1281.9	1180.38	False	True	1166.4085024346482	1107.565621592472	838.6029414792416	1241.820092821708	1345.340395181875	1180.9335856382008	1332.8809313272266	1232.4634696684561	1222.3047487984004	966.6017438839406	1.206710529765709	1.145834495541172	0.8675785521652569	1.284727759575419	1.3918249203401079	1.2217374871403035	1.3789349540913562	1.2750478441268336	1.264538116688068	1.0	9.916777787365154	-7.389833317523881	19.8184863975586	1.2799521755327203	1.0797850357398653	0.29106152342306413	0.1303336273503774	3.8067230429581396	578.363310576367	0.03525331172161835	0.05228907835361964	4.075366606009443e-08	7.389833317523881	-0.20016713979285505	
GEIEFEVVYVAPEVDS(ph)DDENVEYEDESGHR	ddPTM_K562_Methotrexat_30min_R1	3	GEIEFEVVYVAPEVDSDDENVEYEDESGHR	30	0	A0A0J9YVX5;F5H1Y4;Q9HD26-2;Q9HD26	A0A0J9YVX5	GOPC	Golgi-associated PDZ and coiled-coil motif-containing protein	1	GEIEFEVVY(0.006)VAPEVDS(0.973)DDENVEY(0.019)EDES(0.002)GHR;GEIEFEVVY(0.011)VAPEVDS(0.487)DDENVEY(0.454)EDES(0.048)GHR;GEIEFEVVY(0.023)VAPEVDS(0.903)DDENVEY(0.072)EDES(0.003)GHR	63.625	0.0005087	7628900.0	1877.1999999999998	1715.2299999999998	2251.9700000000003	1954.1299999999999	1342.27	1958.61	1677.54	2373.03	2133.58	2193.37	True	False	1794.6805356958143	1998.6426035749816	1779.312271990924	1782.8144568825503	1518.8020322134087	2337.0836627295757	2053.771047881138	2289.5691898537916	2034.3903314933252	1796.1294388101442	0.9991933192101736	1.1127497608964048	0.9906369961675141	0.9925868472283298	0.8455972044083568	1.30117775046201	1.143442673731616	1.2747239371403707	1.1326524066333539	1.0	10.810675606901814	-8.267817256289996	24.999910784297317	1.1858848035659082	0.9954592212123221	0.4577288784963497	0.09830270115239434	453.52614154236466	1777720.003325717	0.03332326471316367	0.030099142361219293	5.397376871514883e-09	8.267817256289996	-0.1904255823535861	
GEIEFEVVYVAPEVDSDDENVEYEDES(ph)GHRYR	ddPTM_K562_Methotrexat_30min_R1	1	GEIEFEVVYVAPEVDSDDENVEYEDESGHRYR	32	1	A0A0J9YVX5;F5H1Y4;Q9HD26-2;Q9HD26	A0A0J9YVX5	GOPC	Golgi-associated PDZ and coiled-coil motif-containing protein	1	GEIEFEVVYVAPEVDS(0.006)DDENVEY(0.023)EDES(0.486)GHRY(0.486)R	61.415	0.00060927	3529500.0	1015.5	704.31	521.06	931.55	576.89	929.71	668.25	994.27	876.27	1337.5	True	False	970.8598359253667	820.68525627694	411.69662670621335	849.8824578246787	652.7611466870248	1109.3632995217602	818.1220732421114	959.3009605423993	835.5323989621457	1095.2657893600115	0.8864148276672296	0.749302374135583	0.37588741537045267	0.7759600145287877	0.5959842378245448	1.0128713142496546	0.746962135757165	0.8758613387376415	0.7628581181654237	1.0	10.097065297375627	-8.247124069442453	24.968457042225694	0.8636551442372533	0.6695442436859783	0.31453920888420916	0.14870966173559602	1048.0453006163045	1827979.7023259248	0.04909328847196936	0.048872063334484205	5.6607754864822944e-09	8.247124069442453	-0.194110900551275	
GELIPISPST(ph)EVGGSGIGTPPSVLKR	ddPTM_K562_Methotrexat_30min_R1	1	GELIPISPSTEVGGSGIGTPPSVLKR	26	1	P10244-2;P10244	P10244-2	MYBL2	Myb-related protein B	1	GELIPIS(0.128)PS(0.086)T(0.786)EVGGSGIGTPPSVLKR	94.72	1.6979e-05	7190200.0	2562.2	1872.9	2678.1	2519.9	1797.2	1677.0	1500.6	2439.0	2610.3	2839.6	True	False	2449.568755891654	2182.3648911432206	2116.00340840193	2298.9842793971447	2033.5633011941995	2001.056515793089	1837.1477487573682	2353.2189875616414	2488.9477227462867	2325.320923713412	1.0534325524323003	0.938522020288753	0.9099833863029911	0.9886739743973881	0.8745301693439841	0.8605506858801708	0.7900620211267623	1.011997511209626	1.0703674049307446	1.0	11.183214124796212	-9.498935524855785	24.447152442815113	1.037183329448976	0.915056568543855	0.35349454436619954	0.06918417447728654	598.2521441554615	610847.8676022505	0.040118979057363356	0.019087696810901708	3.1700380503938107e-10	9.498935524855785	-0.12212676090512109	
GELS(ph)PSFLNPPLPPSIDDR	ddPTM_K562_Methotrexat_30min_R1	4	GELSPSFLNPPLPPSIDDR	19	0	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	GELS(0.989)PS(0.011)FLNPPLPPSIDDR;GELS(0.993)PS(0.007)FLNPPLPPSIDDR;GELS(0.689)PS(0.281)FLNPPLPPS(0.03)IDDR;GELS(0.653)PS(0.347)FLNPPLPPSIDDR	219.95	2.6249000000000003e-35	61612000.0	4251.46	3786.64	4899.43	3294.96	4356.450000000001	4116.28	3444.02	4682.929999999999	4459.42	4591.61	True	False	4064.570908954467	4412.317898125134	3871.1065976724817	3006.095972555422	4929.399534546778	4911.692853207382	4216.4291547883195	4518.228697590007	4252.10253755095	3760.0249353893987	1.080995732421527	1.173481020457164	1.0295427993675204	0.7994883077136036	1.3110018202675233	1.3062926277372449	1.121383295919992	1.2016485994718773	1.1308708347995544	1.0	11.876526514129718	-7.79253528367355	24.99999852947504	1.1921457399920856	1.0323956250409678	0.27962072278225225	0.12224965601060768	269.3728905534538	216564.69408146167	0.03911268419257258	0.04435394501530675	1.612370027172867e-08	7.79253528367355	-0.1597501149511178	
GELS(ph)PSFLNPPLPPSIDDRDLSTEEVR	ddPTM_K562_Methotrexat_30min_R1	2	GELSPSFLNPPLPPSIDDRDLSTEEVR	27	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	GELS(0.47)PS(0.47)FLNPPLPPS(0.059)IDDRDLST(0.001)EEVR;GELS(0.443)PS(0.142)FLNPPLPPS(0.028)IDDRDLS(0.193)T(0.193)EEVR	92.79799999999999	1.9851e-05	984170000.0	2039.79	1706.98	2708.8	2066.97	1882.81	2109.0	2036.08	2152.6000000000004	2058.52	2205.2799999999997	True	False	1950.1232739755835	1989.0294313010047	2140.259897942254	1885.7619492779525	2130.432516760211	2516.5344017934563	2492.7227697520343	2076.891837894706	1962.8198545100902	1805.8824223998847	1.079872781188054	1.1014169065656727	1.1851601584880629	1.0442329610650476	1.1797182863815814	1.3935206249192942	1.3803350311364067	1.1500703545996476	1.0869034606924448	1.0	10.818488249384188	-7.993718930346091	23.964109470141427	1.2297851448760342	1.1089109997977773	0.11651210126483502	0.11829707283643111	175.78020028627293	670640.6894918184	0.038173776935307324	0.04315611602904498	1.0145677881816004e-08	7.993718930346091	-0.12087414507825689	
GELSPS(ph)FLNPPLPPSIDDRDLSTEEVR	ddPTM_K562_Methotrexat_30min_R1	2	GELSPSFLNPPLPPSIDDRDLSTEEVR	27	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	GELS(0.09)PS(0.458)FLNPPLPPS(0.389)IDDRDLS(0.031)T(0.031)EEVR;GELS(0.117)PS(0.862)FLNPPLPPS(0.021)IDDRDLSTEEVR	92.449	2.1866e-05	107805000.0	1263.9	1164.6	1452.9	1378.48	1263.96	1058.72	1228.78	1154.73	1327.9699999999998	1177.8600000000001	True	False	1208.3404693511284	1357.030355184684	1147.9561450532713	1257.6307986282686	1430.1928946012788	1263.3026561720087	1504.36519440096	1114.1174913928055	1266.2329645540312	964.5381403032393	1.25276587711839	1.4069224414060493	1.1901614846379922	1.3038683967778448	1.4827748482311371	1.3097487837804334	1.5596741399235965	1.1550787313009108	1.3127868268184217	1.0	9.913694477026207	-11.818588895515509	8.219941206900515	1.000000000236684	1.333222746241027	0.4129542653835703	0.11814531897031055	1.4159002808639838e-10	0.0	0.11229959235070336	0.02723665182210324	1.518487091872365e-12	11.818588895515509	0.3332227460043431	
GELSPSFLNPPLPPS(ph)IDDRDLSTEEVR	ddPTM_K562_Methotrexat_30min_R1	1	GELSPSFLNPPLPPSIDDRDLSTEEVR	27	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	GELS(0.093)PS(0.116)FLNPPLPPS(0.791)IDDRDLSTEEVR	120.33	2.1089e-14	97028000.0	887.66	735.4	983.45	937.43	782.71	899.19	733.72	957.21	941.96	1223.0	True	False	848.6395292540734	856.912350337297	777.0372846394375	855.2469673539679	885.6500842853945	1072.9457414645126	898.2753873239085	923.5443817482076	898.1684852002041	1001.5028488876967	0.8473660661041569	0.855626473043999	0.7758712673682773	0.8539635891239196	0.8843210833289469	1.071335685820727	0.8969274409169817	0.9221585168468842	0.8968206992099331	1.0	9.967950809727142	-7.949568427120547	4.0390883329030265	0.9514517465686958	0.8318657856030809	0.5436606759590961	0.05335267394400568	0.17941603497210482	6.165181623598821	0.017524278828068597	0.019660574527333597	1.123133995562833e-08	7.949568427120547	-0.11958596096561491	
GELSPSFLNPPLPPSIDDRDLST(ph)EEVR	ddPTM_K562_Methotrexat_30min_R1	1	GELSPSFLNPPLPPSIDDRDLSTEEVR	27	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	GELS(0.001)PS(0.005)FLNPPLPPS(0.066)IDDRDLS(0.391)T(0.537)EEVR	71.696	0.0013044999999999999	60315000.0	776.1	617.89	1075.5	886.02	1000.6	726.21	786.61	868.01	992.56	963.56	True	False	741.9835732759008	719.9858201657772	849.767247577117	808.3440022347943	1132.1964384458684	866.5398046118656	963.0273161735531	837.4815963072487	946.4161022445907	789.0499469126974	0.9403505775256022	0.9124717934306362	1.0769498824529262	1.0244522610990452	1.4348856404791541	1.0982065305274546	1.2204896786845676	1.0613797004664267	1.199437508294142	1.0	9.623972815593389	-7.076583928308448	1.8546234780725415	1.1678748146391804	0.925862107738502	0.3567440593109005	0.1175583060757685	0.36458197400119696	2.427769299954707	0.034306323563116775	0.08689957128344837	8.383320535601705e-08	7.076583928308448	-0.24201270690067844	
GEPNVS(ph)YICSR	ddPTM_K562_Methotrexat_30min_R1	2	GEPNVSYICSR	11	0	P49841;P49841-2;A0A3B3ITW1;A8MT37;P49840	P49841	GSK3B;GSK3A	Glycogen synthase kinase-3 beta;Glycogen synthase kinase-3 alpha	1	GEPNVS(0.778)Y(0.222)ICSR;GEPNVS(0.687)Y(0.313)ICSR	190.57	3.3166999999999996e-05	1039730000.0	4424.299999999999	3590.9	4681.2	4451.299999999999	4048.9	3564.1	4007.2	3879.6	4251.9	4472.700000000001	True	False	4229.813069507236	4184.235190136254	3698.6800923830747	4061.061440089091	4581.401318832179	4252.811883087743	4905.916605904657	3743.152269021788	4054.230097055872	3662.650688650861	1.1548502516534793	1.14240629146033	1.0098369751294751	1.108776617074828	1.25084309378128	1.1611295328450413	1.3394443049418272	1.021979049386383	1.106911480698491	1.0	11.838672400728623														
GEPNVSY(ph)ICSR	ddPTM_K562_Methotrexat_30min_R1	4	GEPNVSYICSR	11	0	P49841;P49841-2;A0A3B3ITW1;A8MT37;P49840	P49841	GSK3B;GSK3A	Glycogen synthase kinase-3 beta;Glycogen synthase kinase-3 alpha	1	GEPNVS(0.378)Y(0.622)ICSR;GEPNVS(0.002)Y(0.998)ICSR;GEPNVS(0.001)Y(0.999)ICSR;GEPNVS(0.263)Y(0.736)ICSR	204.56	2.6732000000000002e-11	1241061000.0	5659.02	5434.7	6502.710000000001	6168.240000000001	5892.349999999999	5479.320000000001	5952.93	5935.35	6015.49	6740.290000000001	True	False	5410.256256719223	6332.691800894897	5137.880035790045	5627.479976010409	6667.297305693096	6538.121042406312	7288.026088238172	5726.600376311594	5735.831182892029	5519.558166254502	0.9801973443810177	1.1473186095966403	0.9308498762096644	1.0195526175293739	1.2079404011820452	1.1845370309491625	1.3204002691367103	1.0375106491898043	1.0391830306200553	1.0	12.430337070349292	-6.248150627794046	23.009408467253845	1.1050833822403903	0.9801970910961089	0.09069899786638402	0.11075283474451929	1878.906449735739	3253140.515517235	0.02959285400029839	0.49078080335059826	5.647410698247531e-07	6.248150627794046	-0.1248862911442814	
GEPNVSYICSR	ddPTM_K562_Methotrexat_30min_R1	2	GEPNVSYICSR	11	0	P49841;P49841-2;A0A3B3ITW1;A8MT37;P49840	P49841	GSK3B;GSK3A	Glycogen synthase kinase-3 beta;Glycogen synthase kinase-3 alpha	0	;	160.72	7.6819e-24	21894000.0	1127.54	1195.8600000000001	1337.42	1286.08	1244.04	1319.23	954.19	1224.73	1249.85	1264.8899999999999	False	True	1077.9746916782756	1393.4555388555339	1056.7138189256973	1173.3313631680137	1407.6530654449318	1574.1525267320908	1168.1913970323837	1181.6555517164284	1191.7447463028948	1035.8061639652972	1.0407108290913696	1.345286007491088	1.0201849107369287	1.1327711728188983	1.358992748272632	1.5197365892339196	1.1278088870993839	1.1408076074704818	1.1505480347216992	1.0	10.016538333584002	-9.961320448428282	1.2668078959875453	1.0076962390869022	1.2272441862522043	0.1665915188901831	0.14701663985501018	0.8630318763561308	3.120200238646064	0.14710931270177138	0.04568566816853742	1.0931494775968283e-10	9.961320448428282	0.21954794716530213	
GESPKT(ph)T(ph)PSPSPRSSPRLNK	ddPTM_K562_Methotrexat_30min_R1	1	GESPKTTPSPSPRSSPRLNK	20	3	Q75MW2	Q75MW2	ZNF767P	Protein ZNF767	2	GES(0.064)PKT(0.912)T(0.547)PS(0.475)PS(0.002)PRSSPRLNK	46.273	0.032917	29891000.0	1666.2	1263.6	1798.1	1508.7	1312.6	1125.6	1157.5	1436.0	1391.6	1746.6	True	False	1592.9558430515483	1472.3884224724081	1420.703382490388	1376.434613407862	1485.2299071597513	1343.1062696342874	1417.0988399218015	1385.4950660674517	1326.9048197424556	1430.2738150999594	1.1137418767190528	1.0294451362584063	0.9933086710331039	0.9623574163746158	1.0384234763159326	0.9390553441268307	0.9907884944553522	0.9686921842798484	0.9277278278703023	1.0	10.482075651156315	-3.00000006870804	0.7022139355653387	0.9711259206928664	19.444421354811556	0.67781670747016	0.029281267003462307	163.32565129278632	0.8577431214202785	0.011137343313140804	4738.7407157564385	0.0009999998417939036	3.00000006870804	18.47329543411869	
GEVPGGSAHYGGPS(ph)PEKK	ddPTM_K562_Methotrexat_30min_R1	3	GEVPGGSAHYGGPSPEKK	18	1	J3KS37;O94762-4;O94762	J3KS37	RECQL5	ATP-dependent DNA helicase Q5	1	GEVPGGSAHYGGPS(1)PEKK;GEVPGGS(0.008)AHY(0.281)GGPS(0.711)PEKK;GEVPGGS(0.004)AHYGGPS(0.996)PEKK	106.0	0.00052465	24604200.0	5136.5	3730.8500000000004	8500.1	5667.5	3446.1099999999997	3098.0200000000004	2883.28	4672.1	4423.5	7205.9	True	False	4910.705610271437	4347.309548892989	6716.0451707394195	5170.6390743614065	3899.3338681717896	3696.668519414017	3529.9289357837856	4507.77959482851	4217.852450510746	5900.84168340135	0.8322042640264192	0.7367270267768179	1.1381503743154437	0.8762544992362782	0.6608097755173368	0.6264646160246061	0.598207700727377	0.7639214601382334	0.7147882754379374	1.0	12.52670503674046	-7.7014087213967395	6.4519936626525	0.7042356104188804	0.903993306225778	0.2464387686450732	0.140965174032465	0.25856990003897196	21.012159903834277	0.04172192872945875	0.0536289312426633	1.988800766156689e-08	7.7014087213967395	0.19975769580689762	
GFAFVTFES(ph)PADAKDAAR	ddPTM_K562_Methotrexat_30min_R1	2	GFAFVTFESPADAKDAAR	18	1	P38159;H0Y6E7;H3BT71;H3BR27;A0A1B0GUK8;P38159-3;Q96E39	P38159;Q96E39	RBMX;RBMXL1	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1	1	GFAFVT(0.001)FES(0.999)PADAKDAAR;GFAFVT(0.019)FES(0.981)PADAKDAAR	104.68	0.00055628	21804000.0	3836.8	2523.7	4355.9	4165.6	3226.8999999999996	2639.1000000000004	2706.2	4378.8	3782.9	5866.6	True	False	3668.138866054602	2940.6985294346446	3441.6561168955473	3800.408315511228	3651.293910874448	3149.0687244064034	3313.1342380962224	4224.795122072532	3607.03380468794	4804.101891483697	0.7635431031463272	0.6121224311765046	0.7163994841567832	0.7910757101651547	0.7600367338892523	0.6554958232648654	0.6896469544015011	0.8794141376480564	0.7508237514866583	1.0	12.230051034535643	-10.536594990690666	0.5441770563949532	1.0121961169661755	0.7073231350852106	0.6139718500546087	0.0659080192524066	1.316470836645965	0.6836810991673624	0.10409621966807532	0.032249457770623685	2.906732117403039e-11	10.536594990690666	-0.3048729818809649	
GFCFLEYEDHK	ddPTM_K562_Methotrexat_30min_R1	2	GFCFLEYEDHK	11	0	B4DT28;O43390-4;O43390-3;O43390;O43390-2;O60506-4;O60506-3;O60506-2;O60506;B7Z645;O60506-5	B4DT28;O60506-4	HNRNPR;SYNCRIP	Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q	0	;	134.3	0.00049147	30974000.0	9515.599999999999	6872.8	13008.0	9942.4	7544.799999999999	6716.6	6207.4	8427.1	8447.7	11141.3	False	True	9097.305617657721	8008.413382374456	10277.798564837865	9070.765228571834	8537.07344471956	8014.487891458477	7599.567463438952	8130.714116474248	8054.968270866881	9123.50260859566	0.9971286256976287	0.8777783846775439	1.126518948452395	0.9942196125450614	0.9357232425928613	0.8784441935608885	0.8329659988565202	0.89118340458564	0.8828811276140739	1.0	13.155372081194585	-7.948072927862619	3.1254431046941877	0.8871141817217462	0.999154622289727	0.3248062841348687	0.06842621307835747	0.2834335929200373	5.66394419152899	0.022805803860107214	0.02558147736294251	1.1270081901289066e-08	7.948072927862619	0.11204044056798079	
GFCVVS(ph)PARPAEEAT(ph)S(ph)LEGALS(ph)GT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	GFCVVSPARPAEEATSLEGALSGTR	25	1	A0A590UK92;O14746-4;O14746-2;O14746-3;O14746	A0A590UK92	TERT	Telomerase reverse transcriptase	5	GFCVVS(1)PARPAEEAT(1)S(1)LEGALS(1)GT(1)R	44.021	0.021252	96682000.0	3177.0	3010.2	2852.5	2538.6	3254.2	2447.2	2298.1	3058.3	3484.8	2934.6	True	False	3037.342884032389	3507.584385348561	2253.799231718945	2316.044879430767	3682.184339386912	2920.086765324296	2813.5074246430145	2950.7378555390596	3322.792408622099	2403.115503144591	1.2639188087538369	1.4595987503549954	0.9378655452764303	0.9637676076743346	1.5322544149744775	1.2151254325908278	1.1707749465064854	1.2278801629292802	1.382701915190538	1.0	11.23069027637134	-12.144396787798176	4.570419788519274	0.9999711961888654	1.234380282739444	0.13533464027062225	0.18108976697778462	5.4558296439188824e-05	1.0213495897555552e-05	0.1799835899790753	0.04364707283208103	7.171387868605062e-13	12.144396787798176	0.23440908655057846	
GFDQTINLILDESHER	ddPTM_K562_Methotrexat_30min_R1	2	GFDQTINLILDESHER	16	0	C9JNV3;F2Z2Y6;C9JIZ0;O95777	C9JNV3	LSM8	U6 snRNA-associated Sm-like protein LSm8	0	;	135.69	1.3112e-05	11615500.0	6545.4	5298.1	5387.1	5370.3	5762.799999999999	5096.799999999999	5622.1	8078.0	8355.8	8392.7	False	True	6257.672053240668	6173.520972697895	4256.421329077343	4899.494136928641	6520.709209949879	6081.684466126545	6882.9990392435075	7793.892161346009	7967.3406818079975	6872.7007030742225	0.9105113584302534	0.8982671062536481	0.6193229580292078	0.7128921145565166	0.9487841085576599	0.8849045999349501	1.0014984409498116	1.134036312371311	1.159273628523374	1.0	12.746661417953888	-8.664549506924354	1.297403463270673	1.110998283001985	0.7961320166769361	0.6164626606580104	0.09822274077174606	0.30515574133595297	1.0443439747593077	0.06319252165785899	0.03993444936905896	2.1649630726439325e-09	8.664549506924354	-0.314866266325049	
GFENVIHDKLPLQES(ph)EEEEREER	ddPTM_K562_Methotrexat_30min_R1	1	GFENVIHDKLPLQESEEEEREER	23	2	P23497-2;P23497-3;P23497;P23497-4;E9PHV6;P23497-7;P23497-6;P23497-5;C9JBL0	P23497-2	SP100	Nuclear autoantigen Sp-100	1	GFENVIHDKLPLQES(1)EEEEREER	55.972	0.010894	29004000.0	1282.6	1041.8	1476.6	1528.8	1024.0	1092.7	1055.8	1537.5	1442.5	1874.1	True	False	1226.2184397418769	1213.9397424277895	1166.6818389329333	1394.7724776151251	1158.6739485994099	1303.8488102606486	1292.5900260815877	1483.4252535367048	1375.4384898523242	1534.6823295996983	0.7990047295727447	0.7910039224498204	0.7602106419230401	0.9088346498255006	0.7549926953949061	0.8495887292849331	0.8422524982214025	0.9666008560375076	0.8962366108763951	1.0	10.583724341599062	-9.33323016726779	0.6776048702932629	0.9941961517876022	0.7962290089725451	0.6534820126885668	0.04725882652596815	0.4107374505752247	0.37853034971910704	0.042999740245340944	0.02116134681816005	4.642691567720419e-10	9.33323016726779	-0.19796714281505712	
GFGDGYNGYGGGPGGGNFGGS(ph)PGYGGGR	ddPTM_K562_Methotrexat_30min_R1	4	GFGDGYNGYGGGPGGGNFGGSPGYGGGR	28	0	P22626;P22626-2	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	1	GFGDGYNGY(0.01)GGGPGGGNFGGS(0.989)PGY(0.001)GGGR;GFGDGYNGYGGGPGGGNFGGS(1)PGYGGGR;GFGDGYNGY(0.003)GGGPGGGNFGGS(0.997)PGYGGGR;GFGDGYNGYGGGPGGGNFGGS(1)PGYGGGR	124.84	6.2078000000000004e-15	587781000.0	10323.0	9044.699999999999	10439.400000000001	10056.099999999999	9486.7	9194.0	8949.400000000001	10275.0	10119.9	10343.4	True	False	9869.213280411193	10539.18294138666	8248.312602841985	9174.497326102466	10734.367332205105	10970.610379368909	10956.530762847664	9913.622426074553	9649.428057855477	8470.110030404743	1.1651812367235086	1.2442793427186503	0.9738141031501855	1.083161528382656	1.2673232453501155	1.2952146241298212	1.2935523533363247	1.1704242790811576	1.1392329052653853	1.0	13.048164995575902	-5.981266088412181	17.603630221682337	1.1733516496309933	1.147773588567428	0.0	0.1106043107289743	29954.520293199414	2109.862170351897	0.02823041443409045	21157.49157920824	1.0440803243732007e-06	5.981266088412181	-0.025578061063565194	
GFGEYSRS(ph)PTF	ddPTM_K562_Methotrexat_30min_R1	2	GFGEYSRSPTF	11	1	D6REL5;Q6UWZ7-2;Q6UWZ7	D6REL5	FAM175A	BRCA1-A complex subunit Abraxas	1	GFGEYSRS(1)PTF;GFGEYSRS(1)PTF	133.42	0.0010921	298910000.0	8542.9	7822.200000000001	10317.1	9010.900000000001	8612.900000000001	8459.8	8479.4	9413.099999999999	8537.0	9344.0	True	False	8167.364344979631	9114.685595333709	8151.681701513591	8220.928387324786	9745.647316300645	10094.536620337727	10381.121298689346	9082.03593760413	8140.116733358253	7651.711054788747	1.0673905857786106	1.1911957377989821	1.065341025444491	1.074390855647875	1.2736559504820073	1.319252197065147	1.3567058693613927	1.1869287630666907	1.0638296029570853	1.0	12.901566680079773	-6.258845759168931	22.38825145572038	1.1834429633711478	1.0673904074710854	0.057165691131888074	0.11422518586171716	164.58412288602804	1420296.0234056152	0.030420933471679897	0.19749515593257785	5.510033519537408e-07	6.258845759168931	-0.11605255590006247	
GFGFGQGAGALVHS(ph)E	ddPTM_K562_Methotrexat_30min_R1	3	GFGFGQGAGALVHSE	15	0	E9PP21;P21291	E9PP21	CSRP1	Cysteine and glycine-rich protein 1	1	GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E	146.67	7.832e-09	87581000.0	9404.1	7566.200000000001	9223.1	9208.5	8712.4	8801.8	8920.5	8905.9	8969.9	8737.4	True	False	8990.707024151396	8816.385946589691	7287.2973511190185	8401.205102118576	9858.233310329588	10502.623280088013	10921.149202179198	8592.674449087825	8552.891306846697	7154.972192862929	1.2565677100911181	1.2322040825517142	1.0184941540916237	1.1741771841543651	1.3778157405228153	1.4678775817695504	1.5263719980733153	1.200937504363609	1.195377295159608	1.0	12.804730444724203	-7.735478273620452	13.8931715782105	1.3250117361251867	1.1639000542315852	0.11756988551859904	0.153648357496406	2.984516671890986	1593.459284589633	0.04680603143307157	0.06014341611683479	1.838745938207734e-08	7.735478273620452	-0.1611116818936016	
GFGFVTFDDHDPVDK	ddPTM_K562_Methotrexat_30min_R1	1	GFGFVTFDDHDPVDK	15	0	P22626;P22626-2;A0A087WUI2	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	0		84.17299999999999	0.0322	7712400.0	1723.7	1113.5	1586.6	1692.9	1048.6	1003.7	1466.6	2659.6	2395.5	3125.4	False	True	1647.928211900103	1297.4869487361707	1253.5943421718764	1544.486085396812	1186.5092797864656	1197.6508198577956	1795.5223832650663	2566.060360524369	2284.133727862212	2559.359774254789	0.6438829852985134	0.5069576234603285	0.489807785049246	0.6034657967719764	0.4635961273291257	0.4679493801165632	0.7015513806720941	1.0026180712602357	0.892462931878065	1.0	11.321567248784252	-9.065626783882255	3.2752344746237134	0.959707508452535	0.5279033065616966	0.9063599974009653	0.06249470008332288	0.07000315648667124	1.464947069762258	0.032007658513485714	0.0178067434521223	8.597520422537268e-10	9.065626783882255	-0.43180420189083846	
GFGFVTYATVEEVDAAMNARPHK	ddPTM_K562_Methotrexat_30min_R1	2	GFGFVTYATVEEVDAAMNARPHK	23	1	F8W6I7;P09651-3;P09651-2;P09651;A0A2R8Y4L2;F8W646;F8VZ49;F8VYN5	F8W6I7	HNRNPA1	Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed	0	;	111.73	2.2505000000000003e-06	12922900.0	5274.2	3042.0	4425.1	4822.2	3256.2	3302.3999999999996	3637.2	5520.9	5857.1	8021.1	False	True	5042.352483148765	3544.638794840983	3496.331982569502	4399.445212948493	3684.4473744427714	3940.542061869468	4452.934687311943	5326.726817724092	5584.804699420479	6568.40106395184	0.7676681789152294	0.5396501767065319	0.532295751816646	0.6697893703679525	0.5609352015155489	0.599924094692638	0.6779328247402817	0.8109624801929037	0.8502533029035857	1.0	12.681326504851663	-9.583002766879057	1.065687896421783	0.9875086921277251	0.6015463421582975	0.7844643929112075	0.06792295971746537	0.20996676890711238	0.4512108662564388	0.06196269308155029	0.021808376001180442	2.6121447124389185e-10	9.583002766879057	-0.3859623499694276	
GFGQSNS(ph)LPTAGSVGGGMGR	ddPTM_K562_Methotrexat_30min_R1	2	GFGQSNSLPTAGSVGGGMGR	20	0	G3V2R1;Q9UPU9-2;Q9UPU9-3;Q9UPU9	G3V2R1	SAMD4A	Protein Smaug homolog 1	1	GFGQS(0.018)NS(0.932)LPT(0.048)AGS(0.002)VGGGMGR;GFGQS(0.021)NS(0.813)LPT(0.166)AGSVGGGMGR	93.115	0.00079004	19834900.0	3353.1	3573.2	3843.0	3476.8	3114.4	3429.8	3189.8	3483.5	3667.3	4035.8999999999996	True	False	3205.701738888576	4163.610565984811	3036.4068177023323	3171.9943420802374	3523.998188982424	4092.560308805687	3905.193848451456	3360.9833305334037	3496.808023456103	3304.959401329398	0.9699670554497897	1.2598068721540199	0.9187425468769624	0.9597680203890927	1.0662757877040543	1.2383087995451567	1.181616284569371	1.0169514727416833	1.0580487076632574	1.0	11.690416834198233	-5.974903694061767	17.75055044692976	1.0797057753302757	0.6638945858056916	0.08034688435771198	0.10918416026503353	22757354.301878408	398446152.79553896	0.028377938949631136	277645367.8457229	1.059488643509616e-06	5.974903694061767	-0.41581118952458407	
GFGSSAPEGLEPDS(ph)MASAASALHLLSPRPR	ddPTM_K562_Methotrexat_30min_R1	1	GFGSSAPEGLEPDSMASAASALHLLSPRPR	30	1	Q6P2E9-2;Q6P2E9	Q6P2E9-2	EDC4	Enhancer of mRNA-decapping protein 4	1	GFGSSAPEGLEPDS(0.826)MAS(0.012)AAS(0.012)ALHLLS(0.149)PRPR	53.659	0.0049952	40595000.0	2020.1	1428.4	2070.0	1679.8	1947.2	2044.9	1727.0	2657.0	2759.6	2741.1	True	False	1931.298822799443	1664.4188213513664	1635.5352882237391	1532.5345420577482	2203.290930383565	2440.0479839864556	2114.323711917884	2563.5518039980634	2631.306798333775	2244.660228197927	0.8603969538632317	0.7415014532901516	0.7286337895053232	0.6827467795819181	0.981569906529874	1.0870455819255063	0.9419348573816533	1.14206674658113	1.172251713323338	1.0	11.132281366959663	-7.897547653373496	4.431627046061694	1.0666002958758003	0.7517320685913479	0.8004412142366168	0.0744746301177384	0.09631505821733631	3.33125056906457	0.024633337285181963	0.028185463570569207	1.2660543408770884e-08	7.897547653373496	-0.3148682272844524	
GFGSSAPEGLEPDSMASAASALHLLS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	GFGSSAPEGLEPDSMASAASALHLLSPR	28	0	Q6P2E9-2;Q6P2E9	Q6P2E9-2	EDC4	Enhancer of mRNA-decapping protein 4	1	GFGSSAPEGLEPDSMAS(0.003)AAS(0.074)ALHLLS(0.924)PR;GFGSSAPEGLEPDSMASAAS(0.258)ALHLLS(0.742)PR	133.22	1.0959000000000001e-16	55285000.0	3112.0	2294.38	2217.63	2224.13	2628.2	2299.4700000000003	2316.5	3445.9	3852.5	3349.0	True	False	2975.2002062035876	2673.487297208168	1752.179768707057	2029.1439760845951	2973.854366903289	2743.810033614033	2836.034093027087	3324.7057438452857	3673.398115879429	2742.4636475264897	1.0848640451030263	0.9748487640372067	0.6389071994764272	0.7398982217739662	1.0843733041221886	1.000490940358957	1.0341191197137622	1.2123062221240153	1.3394518899794996	1.0	11.421256781906472	-8.598523071775967	1.1875272399480592	1.1939534942855605	0.8721113122126682	0.38796613418191384	0.15114617922910456	0.4922093424686583	1.414359113214698	0.0982587059197215	0.06516302600080248	2.5204432782202938e-09	8.598523071775967	-0.3218421820728923	
GFGSSAPEGLEPDSMASAASALHLLS(ph)PRPR	ddPTM_K562_Methotrexat_30min_R1	1	GFGSSAPEGLEPDSMASAASALHLLSPRPR	30	1	Q6P2E9-2;Q6P2E9	Q6P2E9-2	EDC4	Enhancer of mRNA-decapping protein 4	1	GFGSSAPEGLEPDS(0.012)MAS(0.01)AAS(0.014)ALHLLS(0.964)PRPR	55.777	0.0026986999999999996	11264000.0	2422.1	1774.6	1867.5	1821.7	2009.8	1560.2	2022.1	2547.7	2502.7	2414.7	True	False	2315.6273841406523	2067.8224869575292	1475.5372708975033	1661.9943893717127	2274.123927631928	1861.6865688374344	2475.607398881964	2458.095946949893	2386.350023260596	1977.374431078595	1.171061660222617	1.045741491574561	0.7462103523269715	0.8405056539874177	1.1500724859638574	0.9414942054358129	1.2519669314888422	1.243111020510708	1.2068275920605072	1.0	10.949370367015227	-8.7579651019797	24.997431930550782	1.1957356521998372	0.9758085058019749	0.3158499132860172	0.1376313545822777	103.22359316406278	742700.4917121447	0.05673246829522387	0.04214914578337039	1.745962445250712e-09	8.7579651019797	-0.21992714639786237	
GFGSVEELCTNS(ph)SLGMEK	ddPTM_K562_Methotrexat_30min_R1	2	GFGSVEELCTNSSLGMEK	18	0	Q2NKX8;B5MDQ0	Q2NKX8	ERCC6L	DNA excision repair protein ERCC-6-like	1	GFGSVEELCT(0.171)NS(0.414)S(0.414)LGMEK;GFGS(0.003)VEELCT(0.13)NS(0.433)S(0.433)LGMEK	110.93	0.00060593	25851000.0	3619.5	2980.4	5616.3	4758.8	3190.6	3043.8999999999996	2975.4	3450.1	3574.2	4842.799999999999	True	False	3460.3911138669264	3472.8604418619543	4437.515381280671	4341.60339251364	3610.219824610622	3632.0905953623	3642.7091907588156	3328.7580274647053	3408.0362221353043	3965.7219923085304	0.8725753143004762	0.8757195911860501	1.1189678423972176	1.0947825896354124	0.9103562558375498	0.9158712089265701	0.9185488034269185	0.839382597650766	0.8593734580349175	1.0	11.953367829002453	-7.965397292433221	24.99424715073089	0.899093661258618	0.9928727158560294	0.18823891181793573	0.08394468790514358	305.6685967699073	220789.65287437485	0.028322866886274337	0.03211500497107676	1.0829357914850414e-08	7.965397292433221	0.09377905459741143	
GFQFVSS(ph)SLPDICYR	ddPTM_K562_Methotrexat_30min_R1	2	GFQFVSSSLPDICYR	15	0	P62633-2;P62633-8;P62633-5;P62633;P62633-4;P62633-6	P62633-2	CNBP	Cellular nucleic acid-binding protein	1	GFQFVS(0.219)S(0.391)S(0.391)LPDICYR;GFQFVS(0.019)S(0.491)S(0.491)LPDICYR	167.92	1.1791e-05	11714200.0	3066.9	3101.1000000000004	2924.7	3246.1000000000004	2887.3999999999996	2780.8	2878.5	3612.7	3638.2	3601.5	True	False	2932.082748202371	3613.504065312742	2310.845438390324	2961.5194528953784	3267.143710142514	3318.1502439579153	3524.07689910575	3485.6392933021475	3469.060876104486	2949.233450751463	0.9941846914340667	1.2252350061986526	0.7835410376894789	1.004165828968468	1.107794199645351	1.125089044108208	1.194912833437386	1.1818797499445182	1.1762584868351371	1.0	11.526124310151328	-7.878416619229817	3.4478521888780937	1.148127219595076	1.0021003109253193	0.24293348458172692	0.11147656898742948	0.33678089285166235	7.814801473577549	0.03628900129217993	0.04209906525522352	1.3230717019073159e-08	7.878416619229817	-0.14602690866975676	
GFS(ph)DSGGGPPAK	ddPTM_K562_Methotrexat_30min_R1	1	GFSDSGGGPPAK	12	0	Q9H307;G3V5F0;G3V579	Q9H307	PNN	Pinin	1	GFS(0.5)DS(0.5)GGGPPAK	117.2	0.0013435	33354000.0	2193.1	1845.7	3530.1	2255.0	1622.9	1477.7	1504.6	2040.2	2058.5	2963.9	True	False	2096.6939499437935	2150.6705534641674	2789.1802516708317	2057.3076511133618	1836.339796076154	1763.2446114415313	1842.044850579993	1968.4450096036323	1962.8007843057237	2427.1089892217865	0.8638647704963858	0.8861038227021463	1.149177999033796	0.8476371107557903	0.7565955234111456	0.7264793708365307	0.7589460789606383	0.8110245639338934	0.8086990707965959	1.0	11.245023178762729	-7.508710395889765	24.47728584138732	0.7948143664399854	0.9650299036900712	0.32118691006776545	0.10017375745461143	525.8169481192547	908403.4967140012	0.02816512085380663	0.03995941245263819	3.099485465261517e-08	7.508710395889765	0.17021553725008587	
GFS(ph)LEELR	ddPTM_K562_Methotrexat_30min_R1	4	GFSLEELR	8	0	J3QSB4;P26373-2;P26373	J3QSB4	RPL13	60S ribosomal protein L13	1	GFS(1)LEELR;GFS(1)LEELR;GFS(1)LEELR;GFS(1)LEELR	128.6	0.00041622	89171700.0	15377.7	16803.0	25888.3	17481.199999999997	17197.3	16981.7	15567.1	18519.5	15185.699999999999	17670.0	True	False	14701.71472073808	19579.41014783465	20454.699614552	15948.65033731391	19459.046383055298	20263.173186788023	19058.418445742256	17868.158688047475	14479.720121560094	14469.791774199182	1.0160280776778305	1.3531231446430578	1.4136139575293956	1.1022031682412772	1.344804865661741	1.4003776628575202	1.3171176712939967	1.2348594207076191	1.0006861430707397	1.0	13.820756540638735	-9.717430554900606	3.886162756919866	0.9916295656277042	1.2860924576147237	0.4515692289594435	0.12053705633662821	0.18924270911775962	5.646911415510231	0.10089963303068988	0.030993193963585932	1.9167675355914058e-10	9.717430554900606	0.29446289198701947	
GFSDS(ph)GGGPPAK	ddPTM_K562_Methotrexat_30min_R1	3	GFSDSGGGPPAK	12	0	Q9H307;G3V5F0;G3V579	Q9H307	PNN	Pinin	1	GFS(0.02)DS(0.98)GGGPPAK;GFS(0.325)DS(0.675)GGGPPAK;GFS(0.264)DS(0.736)GGGPPAK	145.29	9.9165e-09	96261000.0	7320.099999999999	5270.2	9811.900000000001	7292.799999999999	5315.0	5040.9	5029.400000000001	6524.2	6647.2	8277.6	True	False	6998.317168840249	6141.010971916812	7752.516277547101	6653.451546802448	6014.015660943227	6014.982582266776	6157.370976676209	6294.74018804824	6338.1731228744275	6778.446428416026	1.0324367453141623	0.9059614229852122	1.1437010470493154	0.9815599513939383	0.8872262581779481	0.8873689046285412	0.9083749560760416	0.9286405453703914	0.9350480511735075	1.0	12.726738940494403	-7.549498315268337	7.905213695098482	0.919419225331117	1.023021626354323	0.3645592791605823	0.061131207980642234	0.2038020040923837	49.17718054789233	0.017663385041921786	0.023072624022082773	2.821640528884775e-08	7.549498315268337	0.10360240102320606	
GFSQYGVSGS(ph)PTK	ddPTM_K562_Methotrexat_30min_R1	3	GFSQYGVSGSPTK	13	0	Q9NXC5	Q9NXC5	MIOS	WD repeat-containing protein mio	1	GFSQYGVS(0.187)GS(0.458)PT(0.355)K;GFSQYGVS(0.004)GS(0.658)PT(0.338)K;GFSQY(0.002)GVS(0.024)GS(0.487)PT(0.487)K	153.24	3.9136e-08	83561000.0	10258.7	7696.4	11104.7	9464.099999999999	7779.299999999999	6812.6	7261.5	9284.4	8736.6	11102.5	True	False	9807.739831420544	8968.099283568085	8773.975224704422	8634.397046963173	8802.414305018936	8129.038532791884	8890.076221245927	8957.862389551987	8330.43737292465	9091.729664575345	1.0787540097716535	0.9864018854972152	0.9650501662946481	0.9496979524815718	0.9681781827847691	0.8941135331449138	0.9778201232582693	0.9852759287877912	0.916265406062725	1.0	13.15033907205423	-6.1008138160759495	1.5734595676968466	0.954233980403314	1.1659859411756872	0.5998538251197795	0.029892346394316417	1.0653838032829055	1.842751391643099	0.008095102402303237	0.38939058172406893	7.928411520671409e-07	6.1008138160759495	0.21175196077237324	
GFSQYGVSGSPT(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	GFSQYGVSGSPTK	13	0	Q9NXC5	Q9NXC5	MIOS	WD repeat-containing protein mio	1	GFSQYGVSGS(0.06)PT(0.94)K	151.56	2.4911e-09	40382000.0	2537.4	1860.8	3118.4	2393.9	1855.1	1751.8	1657.2	2333.4	2013.1	2799.7	True	False	2425.8589341969737	2168.2655718080537	2463.890455457443	2184.030503769524	2099.078166061295	2090.310557165373	2028.8692851130957	2251.33299941629	1919.5114203963344	2292.647200352317	1.0581038957167879	0.9457475932079086	1.0746923709320868	0.9526238940879774	0.9155696374648155	0.9117454080349343	0.8849461377229405	0.9819796953802232	0.8372467513106063	1.0	11.16279865028205	-7.476860550571668	5.781092896896544	0.9197397896782189	1.0182239162355582	0.4304640589508868	0.053355064275269024	0.1893677840272939	15.609767684464511	0.014154195346051002	0.020688693762366487	3.335334912323489e-08	7.476860550571668	0.09848412655733929	
GFSVVADT(ph)PELQR	ddPTM_K562_Methotrexat_30min_R1	1	GFSVVADTPELQR	13	0	C9J9W2;Q14847;Q14847-2;Q14847-3	C9J9W2	LASP1	LIM and SH3 domain protein 1	1	GFS(0.001)VVADT(0.999)PELQR	154.65	1.9751999999999998e-07	140870000.0	2479.8	2034.1	1919.5	2413.1	2121.8	1713.1	1806.4	1946.5	1888.4	2096.4	True	False	2370.7909612286817	2370.2004512117164	1516.623181519549	2201.547269579447	2400.85389075999	2044.1323298778404	2211.5311830969704	1878.0404917132964	1800.6086961782523	1716.7216454686575	1.3809990498380802	1.3806550744367543	0.8834415209493777	1.2824136489398281	1.398510875130585	1.190718562484136	1.2882293346358036	1.0939691339422704	1.0488646781678423	1.0	10.74544041995031	-9.43083741408014	2.994657115566807	1.028384709386367	1.2522274938967384	0.32353432576739205	0.1409021201871688	0.35964047917396874	6.078710883485209	0.1027902379836643	0.03996764989164728	3.7081951873061034e-10	9.43083741408014	0.22384278451037143	
GFT(ph)DSPHYSDHLNDSR	ddPTM_K562_Methotrexat_30min_R1	1	GFTDSPHYSDHLNDSR	16	0	Q99081;Q99081-3;B4DGI9;H0YNQ5	Q99081	TCF12	Transcription factor 12	1	GFT(0.586)DS(0.414)PHYSDHLNDSR	129.42	0.00023379	50677000.0	3145.8	3086.5	3046.9	3314.2	3221.7	2471.0	2744.1	3518.8	3672.9	3145.3	True	False	3007.514398674562	3596.4916634703136	2407.39732835213	3023.6492316274507	3645.4100197292187	2948.485778488206	3359.534277865585	3395.041809525173	3502.147680678406	2575.655691419845	1.1676694244084513	1.3963402311307094	0.9346735809338858	1.1739337838127917	1.415332814814105	1.1447515241693025	1.304341371813413	1.3181271941101866	1.359711118355197	1.0	11.330724034372093	-7.568263728476168	24.99992803169345	1.271967294510871	1.1667490164528356	0.07188395044732798	0.15104751257847465	304.80615702641785	167898.02356509547	0.04333713715459805	0.0559480345969673	2.70231686422419e-08	7.568263728476168	-0.10521827805803552	
GFTDS(ph)PHYSDHLNDSR	ddPTM_K562_Methotrexat_30min_R1	3	GFTDSPHYSDHLNDSR	16	0	Q99081;Q99081-3;B4DGI9;H0YNQ5	Q99081	TCF12	Transcription factor 12	1	GFT(0.263)DS(0.737)PHYSDHLNDSR;GFT(0.019)DS(0.981)PHYSDHLNDSR;GFT(0.011)DS(0.989)PHYSDHLNDSR	133.35	3.0992e-05	129076000.0	5350.0	4996.6	6108.5	5627.700000000001	4753.4	4622.6	5243.0	5627.0	5609.9	5342.3	True	False	5114.820405909122	5822.203222321649	4826.409327591646	5134.328278567924	5378.555417258238	5515.852027373363	6418.8762140043245	5429.095220586037	5349.096973464504	4374.757702054573	1.1691665583003565	1.3308630143304379	1.1032403749640711	1.1736257475829173	1.2294521853706866	1.2608360057936199	1.467252966030495	1.2410047802273259	1.2227184538591336	1.0	12.094987399498612	-5.9636530014944675	15.395866330501622	1.2371304353208474	0.9226448740111489	0.01138501562083627	0.1186490783745289	939933.7837827577	11617323.717004519	0.02945869898769891	7974717.264274862	1.087294017596555e-06	5.9636530014944675	-0.3144855613096985	
GFTIPEAFR	ddPTM_K562_Methotrexat_30min_R1	2	GFTIPEAFR	9	0	O00299	O00299	CLIC1	Chloride intracellular channel protein 1	0	;	151.04	4.9199e-07	85888000.0	7571.400000000001	7103.200000000001	7824.5	7731.4	7454.5	6383.8	6902.299999999999	8007.0	7953.6	7481.1	False	True	7238.570321738375	8276.883066244072	6182.244378119154	7053.600165772874	8434.897411947562	7617.379001502638	8450.316477574297	7725.389271589199	7583.838872020412	6126.200296658827	1.181575849827539	1.3510630840389284	1.0091482613604543	1.1513825575732224	1.3768562899498857	1.243410047441166	1.3793731951896875	1.2610409221850867	1.2379351808259629	1.0	12.580776821411632	-5.952620191099808	14.871551639864718	1.2348377834120694	0.9118536225336712	0.0022794912128855094	0.12976404124632668	6639730.324365428	60372840.396874666	0.032082980311344204	59551300.895000376	1.11526945755312e-06	5.952620191099808	-0.3229841608783982	
GGAPDPSPGATATPGAPAQPS(ph)SPDAR	ddPTM_K562_Methotrexat_30min_R1	2	GGAPDPSPGATATPGAPAQPSSPDAR	26	0	O95365	O95365	ZBTB7A	Zinc finger and BTB domain-containing protein 7A	1	GGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDAR;GGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDAR	117.04	5.1886e-09	64495000.0	3245.8	3135.7	3604.2	3143.3	3488.5	3357.9	2934.6	3591.8	3740.1	3389.3999999999996	True	False	3103.1185184111814	3653.8211272133035	2847.7276743072453	2867.731769288084	3947.2988961807037	4006.7666513903487	3592.758752168051	3465.474358148378	3566.223567346047	2775.5468160424825	1.1180206006525832	1.3164328939056087	1.0260059955924945	1.0332132582714073	1.4221698129412084	1.4435954127062438	1.2944327695725166	1.2485735560712428	1.2848724246816892	1.0	11.438556312368933	-6.232027423185205	21.81208434874919	1.239871212104621	1.1180195403459503	0.042880599390330176	0.15220376865798005	6511.799426093549	4828747.280691998	0.04002285662543331	3.081622705789718	5.861011544468083e-07	6.232027423185205	-0.12185167175867062	
GGAPDPSPGATATPGAPAQPS(ph)SPDARR	ddPTM_K562_Methotrexat_30min_R1	1	GGAPDPSPGATATPGAPAQPSSPDARR	27	1	O95365	O95365	ZBTB7A	Zinc finger and BTB domain-containing protein 7A	1	GGAPDPSPGATAT(0.001)PGAPAQPS(0.5)S(0.5)PDARR	85.01299999999999	0.00017521	27445000.0	1983.6	1837.6	2464.5	2237.2	2154.7	1895.2	1905.3	2032.1	2063.4	2220.9	True	False	1896.4033190955774	2141.2321661406263	1947.2351293852184	2041.0681494770784	2438.080817428857	2261.4205776571625	2332.612025661345	1960.6298911947547	1967.472984375241	1818.6734890389891	1.0427398488651538	1.1773593110834213	1.070689786331115	1.1222839953287083	1.3405819307990081	1.2434450665754888	1.282589777505322	1.078054913656204	1.0818175974044024	1.0	10.828670840281163	-9.444541424789696	7.9131944615678655	1.0535501127618898	1.1843893177734006	0.3143346488518233	0.0883744999415281	0.4040159867014815	36.861242001601184	0.053102525690157255	0.025238951429559155	3.593011235053976e-10	9.444541424789696	0.1308392050115108	
GGAPDPSPGATATPGAPAQPSS(ph)PDARR	ddPTM_K562_Methotrexat_30min_R1	1	GGAPDPSPGATATPGAPAQPSSPDARR	27	1	O95365	O95365	ZBTB7A	Zinc finger and BTB domain-containing protein 7A	1	GGAPDPSPGATATPGAPAQPS(0.262)S(0.738)PDARR	154.25	4.503e-35	21468000.0	5114.9	4383.1	5642.3	4996.7	5061.6	5416.5	5150.4	5761.6	5175.3	5243.3	True	False	4890.055120408329	5107.332775038625	4458.058336591689	4558.647068877218	5727.289119365988	6463.16196648376	6305.5083068105805	5558.961262294031	4934.701432605013	4293.687561384185	1.1388940276855843	1.1894980018974972	1.0382819599371396	1.0617090795976818	1.3338858585974158	1.5052706733044607	1.4685531298364503	1.2946822941401799	1.149292155532197	1.0	12.068001499137486	-7.7677267948925675	24.740897426367837	1.3261779597157382	1.1080663597494456	0.2671430819792212	0.14341452784558564	153.67738665729877	604717.6671992315	0.0450643368696081	0.05237159285724636	1.7071559855659644e-08	7.7677267948925675	-0.2181115999662926	
GGASS(ph)SCCEEEQTQGR	ddPTM_K562_Methotrexat_30min_R1	2	GGASSSCCEEEQTQGR	16	0	Q9UJK0	Q9UJK0	TSR3	Ribosome biogenesis protein TSR3 homolog	1	GGAS(0.002)S(0.996)S(0.002)CCEEEQTQGR;GGAS(0.155)S(0.759)S(0.086)CCEEEQTQGR	263.15	4.5586999999999986e-95	6388800.0	2621.3999999999996	1968.17	2179.0	2836.0	1885.26	1944.38	2314.2	1970.4299999999998	2649.5	2219.1	True	False	2506.1663947757315	2293.376639330105	1721.6576777968735	2587.3722831740542	2133.2047347036373	2320.1039166235937	2833.2182594790784	1901.1288600496448	2526.325323302414	1817.1994864813475	1.3791366404292982	1.2620390091408078	0.9474235991176334	1.4238240228561787	1.1738968399304208	1.2767469580987074	1.5591124037598387	1.0461861090060123	1.390230044690443	1.0	10.827501087481224	-12.262083513762992	3.929906017925286	0.9997103663563732	1.2666181121689164	0.1833604028901591	0.17245380292756732	45487973.9926413	78.78754919818688	138155.07341995015	0.04022066349051783	5.469107831800594e-13	12.262083513762992	0.2669077458125432	
GGCPGGEATLS(ph)QPPPR	ddPTM_K562_Methotrexat_30min_R1	4	GGCPGGEATLSQPPPR	16	0	P20290	P20290	BTF3	Transcription factor BTF3	1	GGCPGGEAT(0.006)LS(0.994)QPPPR;GGCPGGEATLS(1)QPPPR;GGCPGGEATLS(1)QPPPR;GGCPGGEAT(0.001)LS(0.999)QPPPR	219.41	2.5886e-100	24892000.0	5128.77	4248.54	3881.1500000000005	4558.05	4060.95	3954.71	4321.3	4653.99	5186.4	5027.879999999999	True	False	4903.315411815802	4950.5390221675525	3066.5496540529284	4158.452833329161	4595.036105043727	4718.901737371546	5290.461526526205	4490.306533793356	4945.285396027791	4117.2822108466635	1.1909106931991191	1.2023803005598543	0.7447994810689291	1.0099994657577847	1.1160362272322402	1.1461205464468678	1.2849402240606413	1.090599648953863	1.201104306865295	1.0	12.007476623346824	-7.920980509850305	3.982110231070796	1.156831908827233	1.0286990065832142	0.11843605141720914	0.1360276940449618	0.44993650631871657	13.88087947934114	0.04575441038917225	0.0520172929269746	1.1995531351609388e-08	7.920980509850305	-0.12813290224401874	
GGDAKS(ph)PVLQEK	ddPTM_K562_Methotrexat_30min_R1	1	GGDAKSPVLQEK	12	1	A6NFI3	A6NFI3	ZNF316	Zinc finger protein 316	1	GGDAKS(1)PVLQEK	107.11	0.007790300000000001	10199000.0	1564.5	951.49	2900.6	1622.4	1478.1	1174.8	1281.8	1408.8	1836.0	2130.1	True	False	1495.7264532794056	1108.7075499353214	2291.803699044337	1480.1667109384994	1672.4960580320192	1401.8134733176632	1569.2762790598395	1359.251705484559	1750.6447607409807	1744.3182489089795	0.8574848392573655	0.6356108185124967	1.3138678681357567	0.848564596434338	0.9588250647942925	0.8036454782230575	0.8996502100699665	0.779245247439641	1.0036269252104415	1.0	10.768447566884593														
GGDLMAYDRR	ddPTM_K562_Methotrexat_30min_R1	2	GGDLMAYDRR	10	1	Q5T6W2;P61978-3;P61978;P61978-2	Q5T6W2	HNRNPK	Heterogeneous nuclear ribonucleoprotein K	0	;	103.7	0.0057416	49327000.0	6125.9	5066.8	4749.1	6114.200000000001	5016.1	4755.0	5588.5	6515.9	6542.9	6809.1	False	True	5856.612770945547	5904.002579125667	3752.328810291477	5578.177578907899	5675.805071845216	5673.836453545697	6841.863383933465	6286.732103752719	6238.722007109024	5575.906008471968	1.050342807437406	1.0588418402597162	0.6729541001211699	1.000407390374314	1.0179162028953614	1.0175631448817348	1.2270406591391634	1.1274817212127912	1.1188714439644394	1.0	12.444990526956252	-8.229019345119502	1.7683031374431304	1.1247237962982124	0.9383131999949952	0.2869883509973461	0.11547688702025867	0.44143478972692907	2.726122031288518	0.04931963636051801	0.0460912481713633	5.901747909680527e-09	8.229019345119502	-0.1864105963032172	
GGDMS(ph)KNVS(ph)QS(ph)QMAKLNQQMAKMMDPR	ddPTM_K562_Methotrexat_30min_R1	1	GGDMSKNVSQSQMAKLNQQMAKMMDPR	27	3	G3V4F7;P61011-2;P61011	G3V4F7	SRP54	Signal recognition particle 54 kDa protein	3	GGDMS(1)KNVS(1)QS(1)QMAKLNQQMAKMMDPR	58.361000000000004	0.0016309	15991000.0	1962.5	1470.9	1780.8	1751.2	1500.4	1370.7	1438.9	1568.9	1599.5	1920.8	True	False	1876.2308498311493	1713.9412239748845	1407.0344160719003	1597.6750149134011	1697.728898904839	1635.5683757886627	1761.609953143394	1513.7208977390146	1525.1395941204794	1572.9245070674456	1.1928295613685789	1.0896525651891265	0.894533977790943	1.0157353437719019	1.0793454430118063	1.0398263670250838	1.1199583611471176	0.9623608068521928	0.9696203392265429	1.0	10.619233714542808	-6.522289137774278	24.999583839035473	1.0148518208002435	1.1670353586053879	0.47037921968811947	0.05999567900776029	16.449880121922	697421.9188235356	0.016123299233064527	0.04379133461185416	3.004075630318095e-07	6.522289137774278	0.15218353780514438	
GGDSIGET(ph)PT(ph)PGASK	ddPTM_K562_Methotrexat_30min_R1	1	GGDSIGETPTPGASK	15	0	O75533	O75533	SF3B1	Splicing factor 3B subunit 1	2	GGDSIGET(0.978)PT(0.98)PGAS(0.042)K	116.58	0.0038784999999999996	12237000.0	3521.5	2668.3	3897.2	3772.1	1898.0	2276.2	2683.8	3278.9	3770.2	4003.0	True	False	3366.699076525042	3109.1912216548967	3079.2309783891565	3441.4058495630647	2147.6202680094543	2716.0434354491526	3285.710467889531	3163.5792285017874	3594.9242249159283	3278.0179101369176	1.0270532891580266	0.9484973257894832	0.9393575821739613	1.0498435163886346	0.6551581861002558	0.8285627198832809	1.0023467101045498	0.965089061508407	1.0966761999069656	1.0	11.678608021587294	-8.895730179111954	8.348397600435064	1.0153015528895648	0.906398240332987	0.1942614278384951	0.10796436956732977	0.47173411075387234	33.97834493489816	0.04849491265910909	0.032657713823673655	1.2713637398150351e-09	8.895730179111954	-0.10890331255657781	
GGDSIGET(ph)PTPGASK	ddPTM_K562_Methotrexat_30min_R1	1	GGDSIGETPTPGASK	15	0	O75533	O75533	SF3B1	Splicing factor 3B subunit 1	1	GGDS(0.003)IGET(0.997)PTPGASK	95.751	0.012511	8726600.0	4462.6	3687.3	5517.8	4987.8	3458.1	3352.6	3506.4	4496.5	5129.3	5660.0	True	False	4266.429447366362	4296.563651616419	4359.689185198527	4550.5273180590775	3912.900763331658	4000.4425014000644	4292.799457712141	4338.3555463595385	4890.839962564663	4634.919153478626	0.9204970585440088	0.9269986183883568	0.9406181727951972	0.981792166675397	0.8442220098693469	0.8631094456949976	0.9261864804028533	0.9360153656841007	1.055215808649858	1.0	12.178328458919	-9.658163623401318	5.06439098140179	1.026537948434411	0.915290760849579	0.5714122825525535	0.03843088867363601	0.1558107540624518	6.173760252725224	0.030394068633369496	0.010633464853015393	2.1970319700906676e-10	9.658163623401318	-0.11124718758483199	
GGDVFGDTSFLSNHGGS(ph)SGSTHRSPR	ddPTM_K562_Methotrexat_30min_R1	1	GGDVFGDTSFLSNHGGSSGSTHRSPR	26	1	Q00587-2;Q00587	Q00587-2	CDC42EP1	Cdc42 effector protein 1	1	GGDVFGDTSFLS(0.002)NHGGS(0.33)S(0.33)GS(0.33)T(0.008)HRSPR	71.905	0.00038862	8238800.0	2048.9	2108.7	2396.4	2083.2	1956.5	2199.2	2267.8	2448.7	2407.1	2620.2	True	False	1958.8328092835875	2457.126833228527	1893.4283887436557	1900.5690903766533	2213.8140433933063	2624.164275212975	2776.4118783366403	2362.5778330636276	2295.194446394127	2145.6563897428787	0.9129294040963946	1.145163244671703	0.8824471605961809	0.88577514063396	1.0317654093993098	1.2230123554533527	1.2939685457601844	1.1010979411045136	1.0696933849082741	1.0	11.067203342813803	-8.05216563056411	5.536557835537938	1.1523314645568017	0.9637031231819402	0.4042942718853225	0.10296294164800036	0.21114330663070963	14.643687269029213	0.03518290097052134	0.03591909656756438	8.868177343473479e-09	8.05216563056411	-0.1886283413748615	
GGDVFGDTSFLSNHGGSSGS(ph)THRSPR	ddPTM_K562_Methotrexat_30min_R1	1	GGDVFGDTSFLSNHGGSSGSTHRSPR	26	1	Q00587-2;Q00587	Q00587-2	CDC42EP1	Cdc42 effector protein 1	1	GGDVFGDTSFLSNHGGS(0.051)S(0.172)GS(0.577)T(0.172)HRS(0.029)PR	141.79	1.7410999999999998e-17	79696000.0	1734.3	1538.3	1755.9	1989.6	1776.9	2007.3	1755.9	2400.1	2089.8	2181.7	True	False	1658.0622485921858	1792.4779283707703	1387.360585793268	1815.1748570532793	2010.5934953772376	2395.18231613087	2149.7052725863427	2315.6871226103704	1992.645654137529	1786.5729888947558	0.9280685753667015	1.003305176733735	0.7765485062278613	1.0160093476932155	1.1253911862963235	1.340657410035413	1.203256338223402	1.296161498581116	1.115345226040979	1.0	10.802979139847789	-7.732282174184158	2.770862719512687	1.2107028422700383	0.9119812040597208	0.5873997063182401	0.10450818895100393	0.16676236757342114	2.620400204685788	0.03213150926317092	0.04106946622014828	1.8523277193319463e-08	7.732282174184158	-0.2987216382103175	
GGDVS(ph)PSPYSSSSWR	ddPTM_K562_Methotrexat_30min_R1	1	GGDVSPSPYSSSSWR	15	0	A0A2R8Y7W5;A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8YFE7	A0A2R8Y7W5	CDK13	Cyclin-dependent kinase 13	1	GGDVS(0.999)PS(0.001)PYSSSSWR	196.97	6.3875e-09	135280000.0	1916.0	1850.3	2148.7	2314.3	2032.1	1795.6	1920.8	2199.7	2133.4	2342.9	True	False	1831.7749341536214	2156.0306252775363	1697.7172337228735	2111.4089121825514	2299.356768504746	2142.5742872737446	2351.588295224012	2122.33530419817	2034.218699654037	1918.5781068348183	0.9547565082849816	1.1237648431392018	0.8848830431635067	1.100507143629329	1.1984691998274277	1.1167511396283287	1.2256932813142303	1.1062021903812407	1.0602741125874708	1.0	10.905821784056526	-7.501138531171536	24.203739986019322	1.1304451286338524	0.9999473209647234	0.33038144655585255	0.08187026914103339	555.6456533399771	618609.3182424159	0.022146618412825673	0.03247803502617028	3.1539984010885834e-08	7.501138531171536	-0.130497807669129	
GGDVS(ph)PSPYSSSSWRR	ddPTM_K562_Methotrexat_30min_R1	1	GGDVSPSPYSSSSWRR	16	1	A0A2R8Y7W5;A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8YFE7	A0A2R8Y7W5	CDK13	Cyclin-dependent kinase 13	1	GGDVS(0.634)PS(0.21)PYS(0.037)S(0.077)S(0.021)S(0.021)WRR	128.95	8.7291e-05	19184000.0	1918.5	1748.2	2434.5	2795.5	2122.0	1735.4	2026.4	1912.9	2170.9	2478.7	True	False	1834.1650371470375	2037.0603356808035	1923.5317194109628	2550.422855293746	2401.0801942655753	2070.7414892709153	2480.8717833412866	1845.6222227579578	2069.975332839105	2029.7834109059147	0.903625986542293	1.0035850745137587	0.9476536802281132	1.2564999997489703	1.182924336342835	1.020178546215786	1.2222347320466307	0.9092705225796659	1.0198010889818299	1.0	10.987110076760914														
GGFGFR	ddPTM_K562_Methotrexat_30min_R1	1	GGFGFR	6	0	Q15056-2;Q15056	Q15056-2	EIF4H	Eukaryotic translation initiation factor 4H	0		96.041	0.00077022	0.0	4187.9	3872.8	4358.7	4325.7	4042.4	3972.6	3890.4	3980.6	4017.4	4575.5	False	True	4003.8049304498727	4512.714373655537	3443.8684351598135	3946.472597082511	4574.046454900639	4740.248726678369	4762.921232684038	3840.600041774441	3830.631950871908	3746.832612498489	1.068583879913447	1.2044077866201601	0.919141256450031	1.053282333434932	1.2207768341832974	1.2651349064450048	1.2711860190380893	1.0250257855029785	1.0223653808536537	1.0	11.871455812232384	-9.478615571587552	24.427217414327234	1.015353502697687	1.1416605381416045	0.24523200906567733	0.10255242930937836	537.0736572077503	296392.3307674872	0.06213853137168172	0.029847029005267825	3.3218837366541823e-10	9.478615571587552	0.12630703544391753	
GGGAPWPGGAQTYS(ph)PSSTCR	ddPTM_K562_Methotrexat_30min_R1	2	GGGAPWPGGAQTYSPSSTCR	20	0	Q765P7;A0A087WXN9	Q765P7	MTSS1L	MTSS1-like protein	1	GGGAPWPGGAQT(0.235)Y(0.003)S(0.753)PS(0.007)S(0.001)TCR;GGGAPWPGGAQTYS(0.464)PS(0.464)S(0.056)T(0.017)CR	229.37	6.858400000000001e-46	102156000.0	4317.4	4283.1	5122.4	5080.2	4567.1	5076.7	4599.3	5363.8	5091.5	5682.7	True	False	4127.612265508793	4990.809474747997	4047.278241737818	4634.8267535193345	5167.7537018050425	6057.700425597361	5630.810103198566	5175.152113769221	4854.79727631411	4653.5079635111315	0.8869894062445004	1.072483277966149	0.8697262954040579	0.9959855639792004	1.1105071147027556	1.3017492337171694	1.2100140683868192	1.1120969716498565	1.0432553923580488	1.0	12.18410296078365	-7.752463432230931	3.654876257913331	1.150444989119567	0.9538026695142959	0.4489638827500677	0.09403795884997825	0.20144199538573732	5.762333726962515	0.02994323456695879	0.037188586371825524	1.7682210963899142e-08	7.752463432230931	-0.196642319605271	
GGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEKGRDR	ddPTM_K562_Methotrexat_30min_R1	1	GGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEKGRDR	40	2	P08621-2;P08621;P08621-4	P08621-2	SNRNP70	U1 small nuclear ribonucleoprotein 70 kDa	0		30.628	0.030917	22892000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	False	True	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
GGGGGQDNGLEGLGNDS(ph)R	ddPTM_K562_Methotrexat_30min_R1	3	GGGGGQDNGLEGLGNDSR	18	0	P08621-2;P08621;P08621-4	P08621-2	SNRNP70	U1 small nuclear ribonucleoprotein 70 kDa	1	GGGGGQDNGLEGLGNDS(1)R;GGGGGQDNGLEGLGNDS(1)R;GGGGGQDNGLEGLGNDS(1)R	284.27	6.664599999999997e-217	58471000.0	4806.700000000001	4600.9	4718.42	4908.7	4792.9	4387.36	4519.76	5335.3	5456.6	6216.700000000001	True	False	4595.403223380069	5361.12052307162	3728.08812302447	4478.3618922484075	5423.2503596114375	5235.155226672606	5533.431233455688	5147.654474923172	5202.923857003941	5090.795388945335	0.9026886512388594	1.0531007658868585	0.7323193800167289	0.8796978762833747	1.0653051134972011	1.02835703003125	1.0869482685302059	1.0111689984832835	1.0220257267267299	1.0	12.31367536611807	-7.757973692974607	24.999786564287653	1.038394492717762	0.8920599880227176	0.46313169775506036	0.07575136863399524	83.54984940134742	602683.5161593751	0.023268494394039267	0.028831876901579942	1.745927907841776e-08	7.757973692974607	-0.1463345046950444	
GGGGSGGY(ph)YGQGGMSGGGWR	ddPTM_K562_Methotrexat_30min_R1	1	GGGGSGGYYGQGGMSGGGWR	20	0	P31942-4;P31942-3;P31942;P31942-2	P31942-4	HNRNPH3	Heterogeneous nuclear ribonucleoprotein H3	1	GGGGS(0.007)GGY(0.833)Y(0.16)GQGGMSGGGWR	98.368	0.00037755	7800400.0	2142.6	2138.1	2271.0	2419.8	2023.4	1744.3	1940.3	2603.9	1906.6	2481.0	True	False	2048.4138694768	2491.3846835139725	1794.3481350512623	2207.659890981868	2289.5125660117637	2081.3612883112014	2375.461666609305	2512.3193610954313	1817.962582150738	2031.6668586184594	1.0082429906198935	1.2262761844764858	0.8831901388948311	1.086624946219325	1.1269133796712323	1.0244599302695396	1.1692181011529752	1.2365803726324587	0.894813327509294	1.0	10.988448141092187														
GGGLRLPLLPPES(ph)PGPLR	ddPTM_K562_Methotrexat_30min_R1	2	GGGLRLPLLPPESPGPLR	18	1	A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160-2;Q14160;Q14160-3;A0A669KAX5	A0A0G2JMS7	SCRIB	Protein scribble homolog	1	GGGLRLPLLPPES(1)PGPLR;GGGLRLPLLPPES(1)PGPLR	107.83	0.00054357	34128000.0	4403.1	3851.1	3118.4	4819.7	3426.8	3952.7	4293.1	4944.8	4860.1	5824.3	True	False	4209.544996123073	4487.428817492474	2463.890455457443	4397.164384066994	3877.48426470748	4716.50333331863	5255.936958676701	4770.888581260679	4634.155011806777	4769.462831379078	0.8826035855500931	0.9408667131168198	0.5165970555944169	0.9219412205368974	0.8129813360106039	0.9888961294106291	1.1019976765720931	1.0002989330102796	0.9716303859876864	1.0	12.219611074132905	-8.296029167149115	3.809693466660837	1.021946018301961	0.8095352086745194	0.4274480615910454	0.1145105274065992	0.2287179546740828	7.226200854726083	0.04196672371904662	0.03805723786296896	5.057906920390728e-09	8.296029167149115	-0.21241080962744163	
GGGPGKSPT(ph)RGST	ddPTM_K562_Methotrexat_30min_R1	1	GGGPGKSPTRGST	13	2	H7BZ50;H7C173;A0A494C0V9;B8ZZ87;Q6NZ67	H7BZ50	MZT2B	Mitotic-spindle organizing protein 2B	1	GGGPGKS(0.014)PT(0.843)RGS(0.081)T(0.062)	97.273	0.033386	2929600.0	1267.4	1064.7	1550.2	1562.0	1052.5	836.61	921.42	1273.5	1182.2	1132.1	True	False	1211.6866135419107	1240.6235781943428	1224.8342047364445	1425.0618851614504	1190.92219814539	998.2730421452932	1128.0718903505363	1228.7102831733284	1127.2397800370313	927.0657197267054	1.3070126397286161	1.3382261384447187	1.3211945805713965	1.5371746089172103	1.2846146425266034	1.0768093576360254	1.216819764064932	1.3253755985449946	1.215922189819872	1.0	9.856527804961086	-8.001008335184153	24.999999966068266	1.1893555512246585	1.3745021263664774	0.4782968930984859	0.1018128194980556	37.465175576461206	928930.7460802383	0.03204753376837904	0.03589732444681812	9.976809156769838e-09	8.001008335184153	0.18514657514181887	
GGGPLILLDLNDENS(ph)NQSFHSEGSLQK	ddPTM_K562_Methotrexat_30min_R1	1	GGGPLILLDLNDENSNQSFHSEGSLQK	27	0	I3L1Q2;Q8WUZ0;Q8WUZ0-2	I3L1Q2	BCL7C	B-cell CLL/lymphoma 7 protein family member C	1	GGGPLILLDLNDENS(0.755)NQS(0.243)FHS(0.002)EGSLQK	119.28	7.5922e-14	0.0	1291.2	849.12	1036.6	1175.8	829.37	880.19	961.34	1400.5	1475.0	1733.3	True	False	1234.4403940392253	989.4226474278023	819.0318259771633	1072.7194395472684	938.4466921385668	1050.2742603672743	1176.9449665403235	1351.2436211890426	1406.42757194605	1419.3825739795948	0.8697023738837107	0.6970796074054284	0.5770338744407735	0.7557648369175272	0.6611654316055159	0.739951496954459	0.8291950233265605	0.9519939486085788	0.990872790556233	1.0	10.47104778399224	-9.08533686709892	1.6467933993600916	0.9971120094974404	0.7050172327963649	0.7446540018712946	0.06962758724857397	0.19783244227712832	1.020651678316027	0.04917502315526417	0.02233361999837871	8.216051122600499e-10	9.08533686709892	-0.29209477670107553	
GGGPQAQSHGEARLS(ph)DPPGR	ddPTM_K562_Methotrexat_30min_R1	1	GGGPQAQSHGEARLSDPPGR	20	1	Q7L2J0	Q7L2J0	MEPCE	7SK snRNA methylphosphate capping enzyme	1	GGGPQAQSHGEARLS(1)DPPGR	79.332	0.0033601	43399000.0	3417.2	3619.4	4061.5	3057.7	2989.3	3287.0	3393.9	3479.4	3126.7	3110.4	True	False	3266.983979639748	4217.444330719083	3209.0466536815056	2789.6361883855084	3382.445346238493	3922.1662298222327	4155.068468950844	3357.0275298573056	2981.3403994601467	2547.0764196077603	1.2826407384128862	1.6557981135754667	1.2598941394053995	1.095230660105244	1.3279716777242891	1.5398698679116314	1.6313089143947666	1.3179924654063873	1.170495072903726	1.0	11.314626529918174	-9.890651728174628	2.5330172446454395	1.0084433897041254	1.3976405502544196	0.3754675779496759	0.1653364994267369	0.29584507458595244	3.9066143603627537	0.17063648220606104	0.04694479445898432	1.286317777492748e-10	9.890651728174628	0.3891971605502942	
GGGPVTLQDYRLPDS(ph)DDDEDEETAIQR	ddPTM_K562_Methotrexat_30min_R1	4	GGGPVTLQDYRLPDSDDDEDEETAIQR	27	1	Q96K21-3	Q96K21-3	ZFYVE19	Abscission/NoCut checkpoint regulator	1	GGGPVTLQDY(0.001)RLPDS(0.999)DDDEDEETAIQR;GGGPVTLQDYRLPDS(1)DDDEDEETAIQR;GGGPVTLQDY(0.001)RLPDS(0.999)DDDEDEETAIQR;GGGPVTLQDY(0.024)RLPDS(0.976)DDDEDEETAIQR	134.74	5.5863e-18	185139000.0	3292.35	3032.7400000000002	3306.01	3352.3	2935.8899999999994	3633.5499999999997	3215.0199999999995	4130.95	3562.19	3835.0200000000004	True	False	3147.622236148579	3533.8487372340705	2612.1236802997896	3058.409063781515	3322.010995071797	4335.6821126773875	3936.0700754430986	3985.6621470552523	3396.5845644139	3140.460715896396	1.0022804043419276	1.1252644299438046	0.8317644819047512	0.9738727341184205	1.0578100780743505	1.3805879152479175	1.2533416054273452	1.2691329418262145	1.0815561383146923	1.0	11.616760507403761	-8.04267391481196	7.9614097795200935	1.2179056447594034	0.9864818867533577	0.4188158600872163	0.11833832974168804	0.2681153887964898	45.712449124776946	0.03858106906809147	0.039053994214600846	9.064129155330193e-09	8.04267391481196	-0.23142375800604575	
GGGQSVQFTDIET(ph)LKQESPNGSR	ddPTM_K562_Methotrexat_30min_R1	1	GGGQSVQFTDIETLKQESPNGSR	23	1	Q02241-2;A0A2U3TZL8;Q02241-3;Q02241	Q02241-2	KIF23	Kinesin-like protein KIF23	1	GGGQSVQFTDIET(0.725)LKQES(0.244)PNGS(0.031)R	139.79	7.7844e-13	53564000.0	2078.5	1674.4	2644.6	2372.3	1717.7	1485.9	1470.5	2259.3	1999.3	2332.5	True	False	1987.1316287256273	1951.066140066318	2089.5346005973424	2164.32414223336	1943.6076577238355	1773.0291453887605	1800.2970575421248	2179.8391384165693	1906.3529793842297	1910.0616476128796	1.0403494731225387	1.0214676277620067	1.0939618641150985	1.133117428402506	1.0175627892182855	0.9282575500139606	0.9425334830381342	1.1412402008808706	0.9980583515546292	1.0	10.899403486938876	-7.976887677142331	24.781149973605373	1.0033257015656292	1.070799962456793	0.2357397752259024	0.06014232070521478	355.0650320992094	380700.8039438408	0.02016000418414016	0.022857770594402	1.0546596308392496e-08	7.976887677142331	0.06747426089116382	
GGGQSVQFTDIETLKQES(ph)PNGSR	ddPTM_K562_Methotrexat_30min_R1	1	GGGQSVQFTDIETLKQESPNGSR	23	1	Q02241-2;A0A2U3TZL8;Q02241-3;Q02241	Q02241-2	KIF23	Kinesin-like protein KIF23	1	GGGQSVQFT(0.002)DIET(0.039)LKQES(0.63)PNGS(0.329)R	66.556	0.004229	38602000.0	961.62	861.8	1737.0	1353.5	872.23	890.44	969.95	1145.5	1065.8	1240.2	True	False	919.3483362112767	1004.1978019046538	1372.4274375094844	1234.8407564443166	986.9435333856092	1062.504927801311	1187.4859782135218	1105.2121157244192	1016.2511906305759	1015.587762216289	0.9052377060993806	0.9887848586450282	1.351362716811863	1.2158877867428788	0.9717954174948206	1.0461970568477863	1.169259833952808	1.0882487529315492	1.0006532457744854	1.0	9.988099200458997	-7.765602512177863	24.999098341280913	1.0566084457262026	1.1231404762479071	0.06461394449008473	0.12391493924084494	376.78922917452917	2262568.670853678	0.04148443037162606	0.048721442709120454	1.7155267242296507e-08	7.765602512177863	0.06653203052170453	
GGGSAAAAAAAAASGGGVS(ph)PDNSIEHSDYR	ddPTM_K562_Methotrexat_30min_R1	4	GGGSAAAAAAAAASGGGVSPDNSIEHSDYR	30	0	P40425	P40425	PBX2	Pre-B-cell leukemia transcription factor 2	1	GGGSAAAAAAAAASGGGVS(1)PDNSIEHSDYR;GGGSAAAAAAAAASGGGVS(1)PDNSIEHSDYR;GGGSAAAAAAAAASGGGVS(1)PDNSIEHSDYR;GGGSAAAAAAAAASGGGVS(1)PDNSIEHSDYR	188.64	3.1401999999999992e-37	368557000.0	11799.399999999998	10979.3	12505.4	12146.400000000001	11545.0	11829.7	10793.3	12433.000000000002	11547.999999999998	12294.3	True	False	11280.712504202625	12793.442708809192	9880.68743640248	11081.54397050258	13063.36985994159	14115.622101894756	13213.972275531729	11995.724342908523	11011.136000564738	10067.683135797224	1.1204874400637705	1.270743480525336	0.9814261437440506	1.1007044839443163	1.2975547287034424	1.4020725435531887	1.3125137230975596	1.1915079349543538	1.0937110209014147	1.0	13.297444095359653	-6.041022271336217	16.05207493251205	1.1949342428226173	1.1041857814148683	0.01320608273918411	0.13256372467613423	2563818.2036866318	148125455.83263573	0.03522101187944462	1776620.1872505439	9.098666119776362e-07	6.041022271336217	-0.09074846140774895	
GGGSCSGSAGGGGS(ph)GSLPSQR	ddPTM_K562_Methotrexat_30min_R1	2	GGGSCSGSAGGGGSGSLPSQR	21	0	O15234	O15234	CASC3	Protein CASC3	1	GGGSCSGSAGGGGS(0.898)GS(0.101)LPS(0.001)QR;GGGSCSGSAGGGGS(0.942)GS(0.026)LPS(0.032)QR	169.58	1.1851e-17	6057900.0	1267.96	1225.63	1524.72	1293.35	1271.44	1248.5700000000002	1189.5500000000002	1263.38	1047.47	1007.3599999999999	True	False	1212.221996612436	1428.1445253520556	1204.7021085316421	1179.9640135554175	1438.6566457101899	1489.8384817673093	1456.3368682755754	1218.9462093093996	998.7733483297152	824.9173424820194	1.469507227190897	1.731257729477526	1.460391298001958	1.430402723750637	1.7440009703051527	1.8060457757921158	1.765433690475866	1.477658604729805	1.2107556683492628	1.0	9.688105756932517	-9.810188877354335	2.2952900682785926	1.0128249177528856	1.6302178505898026	0.7207778376440794	0.13133295750009524	0.1576394231664367	1.619256703162938	0.13418098862325464	0.03794888412811569	1.548143175445439e-10	9.810188877354335	0.617392932836917	
GGHNT(ph)VNQCLT(ph)AT(ph)PS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	GGHNTVNQCLTATPSK	16	0	C9JSF9;A0A087WYK5;A0A0B4J2G0;Q9UII5	C9JSF9	ZNF107	Zinc finger protein 107	4	GGHNT(1)VNQCLT(1)AT(1)PS(1)K	49.62	0.032925	8387200.0	395.46	263.45	411.1	472.3	370.82	359.85	371.58	346.38	426.63	315.31	True	False	378.07605191043405	306.9806346156661	324.8157280139028	430.8941922930555	419.5893297066731	429.385919623222	454.9162738126505	334.1976190699471	406.79606441989387	258.2043035836302	1.4642515506639433	1.18890595685303	1.2579795282486363	1.6688110396017954	1.6250284130944845	1.6629696471505462	1.7618462105350114	1.2943146742002436	1.5754813485830845	1.0	8.012369236535317	-7.248506983222308	24.371886018315358	1.5462297065784023	1.2922316757025998	0.14655597364477824	0.22033568107436666	849.630634552579	1601176.5745135697	0.05744495163616882	0.09864379359969588	5.642778679867251e-08	7.248506983222308	-0.2539980308758025	
GGLNT(ph)PLHESDFSGVTPQR	ddPTM_K562_Methotrexat_30min_R1	1	GGLNTPLHESDFSGVTPQR	19	0	Q99459	Q99459	CDC5L	Cell division cycle 5-like protein	1	GGLNT(0.917)PLHES(0.007)DFS(0.003)GVT(0.074)PQR	101.39	0.0015431	10748000.0	701.56	617.66	1042.8	826.92	607.02	630.49	787.75	710.66	741.42	789.06	True	False	670.7202624242253	719.7178165751086	823.9305307051767	754.4252074761245	686.8537698035293	752.3232693156738	964.422990193001	685.6656849940771	706.9515460286377	646.1535878522692	1.038019868702753	1.1138494471064648	1.2751310929709685	1.167563287830276	1.0629884020090985	1.1643102869958502	1.4925599862389036	1.0611496985927773	1.094092115743647	1.0	9.335733317691414	-9.462530238880795	24.99998509264372	1.0572287433187213	1.1886006576525932	0.2058658323931557	0.12230542794691317	405.4253171817446	167951.86467914048	0.06937486509091857	0.0333265140532328	3.447226035313003e-10	9.462530238880795	0.13137191433387185	
GGLNTPLHES(ph)DFSGVTPQR	ddPTM_K562_Methotrexat_30min_R1	1	GGLNTPLHESDFSGVTPQR	19	0	Q99459	Q99459	CDC5L	Cell division cycle 5-like protein	1	GGLNT(0.091)PLHES(0.841)DFS(0.058)GVT(0.01)PQR	77.795	0.022519	0.0	1101.1	648.62	955.25	802.0	751.93	901.62	621.21	711.79	833.49	850.18	True	False	1052.696962419912	755.7934303450875	754.7560792636357	731.6899051853281	850.8219747757363	1075.8453045732647	760.5321558080536	686.7559422535872	794.7412318246188	696.2041635873603	1.5120520925868015	1.0855916552562384	1.084101645377374	1.05097030936316	1.222086880939738	1.545301451559427	1.0923981722390568	0.9864289502592332	1.1415347298837204	1.0	9.44336663177208	-15.999995514334021	0.04461167506389737	0.10826657758031592	1.6576293887700424	0.16110709896701825	0.1734494483161233	1574.5460268328718	5.212455887141265	174.09756555272443	45.568636940451874	1.0000103286809561e-16	15.999995514334021	1.5493628111897264	
GGLQQPPHLPAGPHAHS(ph)PVPPGIK	ddPTM_K562_Methotrexat_30min_R1	1	GGLQQPPHLPAGPHAHSPVPPGIK	24	0	H0Y3K4;Q96EV2	H0Y3K4	RBM33	RNA-binding protein 33	1	GGLQQPPHLPAGPHAHS(1)PVPPGIK	65.887	0.0030215	16215000.0	2180.0	1849.0	3154.1	2207.9	2143.8	2070.2	1569.0	2324.1	2240.3	2779.6	True	False	2084.169810258296	2154.5158223737585	2492.0975133268084	2014.3368349858943	2425.7472763744286	2470.2368509211983	1920.888189924239	2242.3600856875805	2136.1489419869395	2276.187505125299	0.9156406515567649	0.9465458436628915	1.0948559851573494	0.8849608525001588	1.0657062614184312	1.0852519159159593	0.8439059548472911	0.9851385620202425	0.9384767015797097	1.0	11.152403691854962	-11.373247609718712	11.01878170078967	0.9999999997762123	0.9761121635733414	0.008589932771368325	0.08115084788068982	0.0	0.0	0.07748969549010165	0.01879401172956692	4.23401498054262e-12	11.373247609718712	-0.023887836202870938	
GGLRPGS(ph)LDAEIDLLSSTLAELNGGR	ddPTM_K562_Methotrexat_30min_R1	1	GGLRPGSLDAEIDLLSSTLAELNGGR	26	1	Q15654	Q15654	TRIP6	Thyroid receptor-interacting protein 6	1	GGLRPGS(1)LDAEIDLLSSTLAELNGGR	123.07	2.0398e-10	10000000.0	1585.4	1302.4	1085.4	1229.0	948.07	1053.2	1225.3	1526.3	1680.5	1713.7	True	False	1515.7077143043591	1517.5994629851714	857.5893728686212	1121.255478145597	1072.7578227037527	1256.7159942953374	1500.104715815277	1472.619163884924	1602.3739218002288	1403.3323239074784	1.080077532942432	1.081425573352094	0.6111092563454428	0.7989949772007968	0.7644360529776264	0.8955227303509276	1.0689589987055543	1.0493730806289143	1.1418349698797883	1.0	10.454640979493268	-8.718247165132347	4.426441140892994	1.070740889365766	0.8586391336667731	0.3281115357332911	0.13532652768626313	0.25962023698724346	10.969121001527473	0.059838714802812006	0.04395873020376515	1.9131667960345546e-09	8.718247165132347	-0.2121017556989928	
GGLS(ph)PANDTGAK	ddPTM_K562_Methotrexat_30min_R1	6	GGLSPANDTGAK	12	0	K7EN42;B7Z8J4;P30419	K7EN42	NMT1	Glycylpeptide N-tetradecanoyltransferase 1	1	GGLS(1)PANDTGAK;GGLS(1)PANDTGAK;GGLS(1)PANDTGAK;GGLS(1)PANDTGAK;GGLS(1)PANDTGAK;GGLS(0.998)PANDT(0.002)GAK	204.18	3.5628e-11	1127581000.0	30450.8	21875.6	39896.7	28599.0	23467.0	21543.899999999998	21014.100000000002	29193.5	29614.1	31871.4	True	False	29112.219292758404	25490.171078377163	31522.927890664752	26091.770072811963	26553.321827912463	25706.9537689891	25727.046852700416	28166.748057966666	28237.346954825418	26099.180619819574	1.1154457190372769	0.9766655685358976	1.2078129328982234	0.9997160620819651	1.0174005925591403	0.9849716795119376	0.985741553631896	1.079219630235326	1.0819246537334637	1.0	14.671716893843502														
GGLVS(ph)DAYGEDDFSR	ddPTM_K562_Methotrexat_30min_R1	4	GGLVSDAYGEDDFSR	15	0	J3KS14;F5H478;J3KRU5;X6R3T8;J3QLH3;J3QQJ0;Q9UHR5-2;Q9UHR5	J3KS14	SAP30BP	SAP30-binding protein	1	GGLVS(1)DAYGEDDFSR;GGLVS(1)DAYGEDDFSR;GGLVS(1)DAYGEDDFSR;GGLVS(1)DAYGEDDFSR	285.81	2.0138999999999995e-145	82256000.0	8138.6	7016.28	5670.33	7112.52	6178.37	5437.2	6915.700000000001	6502.24	7509.3	7205.23	True	False	7780.8368888844825	8175.6010136314535	4480.205222644304	6488.976414499689	6990.933949031383	6487.861948521273	8466.72176868009	6273.552533695283	7160.194282043709	5900.293026893781	1.3187204183621228	1.3856262691304864	0.7593191053771977	1.0997718901286198	1.1848452131388079	1.099583006970896	1.4349663194842055	1.063261181283738	1.2135319804299967	1.0	12.526570889636368	-10.396515454323804	0.011148336869798036	2.06329516854392e-06	2.2560101448585543	0.04259217298861484	0.18508572227442285	9791.79787231648	50.30625450783063	5212.934537689382	4960.163329787032	4.013142172841186e-11	10.396515454323804	2.256008081563386	
GGNFGFGDS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	GGNFGFGDSR	10	0	P22626;P22626-2	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	1	GGNFGFGDS(1)R	86.463	0.019463	9467900.0	1235.1	1192.7	1592.1	1303.2	1179.4	1214.1	1191.8	1443.6	1534.9	1487.3	True	False	1180.8064828669822	1389.7734025663497	1257.9399673338232	1188.9504793485291	1334.511772439594	1448.707642113529	1459.0914880508021	1392.8277697597305	1463.542834020333	1217.9355577683323	0.969514745944865	1.1410894391759792	1.0328460806570032	0.9762014679389823	1.0957162420685613	1.1894780744952127	1.198003850650644	1.1435972624954474	1.2016586794641548	1.0	10.250222085437047	-8.009022730012557	6.078109999884245	1.1574488621299133	1.0374552579894523	0.3760045669016766	0.06983024227827463	0.15760861606510873	23.890699367254186	0.02166832989804011	0.02312181979640437	9.794387224109265e-09	8.009022730012557	-0.11999360414046101	
GGNFGFGDS(ph)RGGGGNFGPGPGSNFR	ddPTM_K562_Methotrexat_30min_R1	1	GGNFGFGDSRGGGGNFGPGPGSNFR	25	1	P22626;P22626-2	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	1	GGNFGFGDS(1)RGGGGNFGPGPGSNFR	54.086000000000006	0.012126000000000001	17649000.0	427.68	321.83	459.25	518.15	449.6	532.12	478.28	450.93	442.74	577.39	True	False	408.8796992895725	375.00693732533614	362.8597010225857	472.724593979773	508.73028055692816	634.9446590243404	585.5464649311438	435.07053631044295	422.1571140361996	472.819075976506	0.8647698878162213	0.793129880707203	0.7674387931010971	0.9998001730439114	1.0759512600168581	1.342891374915445	1.2384154842353254	0.9201628242513237	0.8928512733212487	1.0	8.885144432273105	-7.440799804173099	3.2106253550859973	1.0938388149047342	0.8073056164039655	0.45971238471967113	0.12985794988744095	0.2452323570477389	4.8639399184319085	0.04347613810895579	0.0661455523141341	3.624100193133218e-08	7.440799804173099	-0.28653319850076875	
GGNFGFGDSR	ddPTM_K562_Methotrexat_30min_R1	4	GGNFGFGDSR	10	0	P22626;P22626-2	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	0	;;;	154.01	7.741299999999999e-08	333091000.0	21965.699999999997	20933.600000000002	23944.1	23548.6	22186.0	20543.8	21118.8	22680.100000000002	22487.999999999996	22873.399999999998	False	True	21000.11412898654	24392.52158963944	18918.56062548697	21484.130799560124	25103.847874635274	24513.5985981813	25855.228492907572	21882.428027796952	21442.53778842221	18730.805612222266	1.12115381280149	1.3022676170277898	1.0100238621419566	1.146994488349249	1.340243895236116	1.3087316747436444	1.3803585936547471	1.1682587754537468	1.1447739212258163	1.0	14.193125330799566	-6.046662503681219	17.267025916426224	1.211265629530872	1.1071267338007214	0.027694795638899428	0.12591336319246524	3027655.859318299	204461444.8090878	0.032205129572178144	2005007.537085668	8.981264700258818e-07	6.046662503681219	-0.10413889573015056	
GGNLPPVS(ph)PNDSGAK	ddPTM_K562_Methotrexat_30min_R1	2	GGNLPPVSPNDSGAK	15	0	A0A087X0F1;Q9UK61-2;Q9UK61-3;Q9UK61-4;Q9UK61	A0A087X0F1	FAM208A	Protein FAM208A	1	GGNLPPVS(1)PNDSGAK;GGNLPPVS(1)PNDSGAK	111.07	0.0014091	44198000.0	8481.5	6974.5	9752.1	9198.5	6599.3	6446.7	6815.1	8320.2	7876.2	9289.7	True	False	8108.663415461349	8126.917578770031	7705.2674803317495	8392.081786592573	7467.223622062588	7692.433536292963	8343.559657841099	8027.573850065745	7510.037181126425	7607.2453109665075	1.0659132292962874	1.0683128053008057	1.0128853698491798	1.1031696026017006	0.9815936409067727	1.0111983013356556	1.0967911927085	1.0552537116810599	0.9872216386002501	1.0	12.893158413072493	-10.139171572230104	0.006781539192891307	5.073466014679859e-08	2.0523541097517906	0.15607858136413566	0.03924680094081076	7864.460961012395	30.870005288026007	4721.642929784403	4617.930244540867	7.258191589179072e-11	10.139171572230104	2.0523540590171305	
GGPAS(ph)PGGLQGLETR	ddPTM_K562_Methotrexat_30min_R1	4	GGPASPGGLQGLETR	15	0	C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3	C9JWC4	HJURP	Holliday junction recognition protein	1	GGPAS(1)PGGLQGLETR;GGPAS(1)PGGLQGLETR;GGPAS(1)PGGLQGLETR;GGPAS(1)PGGLQGLETR	162.26	1.9996e-07	437134000.0	6889.7	6678.4	7830.2	7498.599999999999	6904.6	7503.300000000001	6537.0	8266.2	7526.9	7741.1	True	False	6586.837037493844	7781.8920866094695	6186.74802601426	6841.2093803275575	7812.675923339345	8953.206532468857	8003.088653623167	7975.473060673236	7176.9760618852315	6339.111777207317	1.039078859782413	1.22759975846928	0.9759644952561193	1.0792063022023946	1.2324559335631724	1.412375557828257	1.262493695473045	1.2581373133929523	1.1321737672603456	1.0	12.630064991842234	-7.771720350407861	7.793881849953078	1.2415895806988015	1.0832976616795136	0.23091716618531755	0.11601398671093632	0.17663672897040872	66.29013980991252	0.03504724652030274	0.041548156139668606	1.6915297857946383e-08	7.771720350407861	-0.15829191901928796	
GGPAS(ph)PGGLQGLETRR	ddPTM_K562_Methotrexat_30min_R1	1	GGPASPGGLQGLETRR	16	1	C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3	C9JWC4	HJURP	Holliday junction recognition protein	1	GGPAS(1)PGGLQGLETRR	86.213	0.009617	22149000.0	358.06	243.35	409.77	204.52	376.42	234.85	230.43	326.97	326.33	465.28	True	False	342.32011112893827	283.55945125724935	323.7648768383777	186.59004913778475	425.9258278630762	280.23143872033796	282.10979324680824	315.4702797716397	311.15898952756254	381.01328334461743	0.8984466581426713	0.7442245812747074	0.8497469536922682	0.4897205879539336	1.1178765845752323	0.7354899447609948	0.7404198372570824	0.8279771167093519	0.8166617887863155	1.0	8.573697485344624	-10.550302838005397	1.4284189004770886	0.9999906327859064	0.7958150890422457	0.1380866588291274	0.1486887398887794	6.307075798552996	14.338802352645592	0.13618963735697998	0.03970590007881253	2.8164183289307764e-11	10.550302838005397	-0.20417554374366065	
GGPASVPS(ph)SSPGTSVK	ddPTM_K562_Methotrexat_30min_R1	1	GGPASVPSSSPGTSVK	16	0	O43237;O43237-2;J3KRZ2;J3KRI4	O43237	DYNC1LI2	Cytoplasmic dynein 1 light intermediate chain 2	1	GGPASVPS(0.4)S(0.278)S(0.278)PGT(0.041)S(0.004)VK	126.1	0.00019167	10821000.0	4499.4	3223.8	5881.4	3802.3	3503.4	3629.7	3114.5	4222.0	4381.6	5066.3	True	False	4301.611763429441	3756.4781547693456	4646.9745140865225	3468.9582624515906	3964.158507346849	4331.088154665578	3813.00590664056	4073.5098669476206	4177.900372365295	4148.743976549253	1.0368467631997234	0.905449498933367	1.12009189777762	0.8361466222210514	0.9555081079368185	1.0439516584168667	0.9190747677353798	0.9818658104653137	1.007027764542919	1.0	12.018458914356724	-9.63924683956851	5.26055983873921	1.0028299073080569	0.9720813817952355	0.022628186165962516	0.07570594885570045	0.988922572402836	40.4557246443288	0.052182311674498105	0.0185284292316957	2.2948439589545688e-10	9.63924683956851	-0.030748525512821367	
GGPASVPSSS(ph)PGTSVK	ddPTM_K562_Methotrexat_30min_R1	1	GGPASVPSSSPGTSVK	16	0	O43237;O43237-2;J3KRZ2;J3KRI4	O43237	DYNC1LI2	Cytoplasmic dynein 1 light intermediate chain 2	1	GGPASVPS(0.163)S(0.163)S(0.673)PGT(0.002)SVK	128.95	0.00010715	11418000.0	2943.4	2290.8	3851.7	3037.4	2606.4	2895.9	2250.0	2955.6	3244.0	3695.5	True	False	2814.011660327648	2669.3157630577653	3043.280806594866	2771.1158578677273	2949.187284794437	3455.4916899732907	2754.6197752259627	2851.649872749974	3093.1871480630416	3026.20913987284	0.9298801008994017	0.8820658585314857	1.0056412712846223	0.9157053362095683	0.9745484031280008	1.1418548851909454	0.9102542646281581	0.9423175137425561	1.0221326435465778	1.0	11.563295979629533	-7.0528546868728865	1.1204152947585997	0.993954992189762	0.9056736705791183	0.17853438635246854	0.06473196846207431	1.1742706488051342	2.5606902554175988	0.02349697882208448	0.08953286022690457	8.854118153838859e-08	7.0528546868728865	-0.08828132161064373	
GGPGAAPGGAS(ph)PASSSSAASSPSSGRAPGAAPSAAAK	ddPTM_K562_Methotrexat_30min_R1	1	GGPGAAPGGASPASSSSAASSPSSGRAPGAAPSAAAK	37	1	Q9BXK1	Q9BXK1	KLF16	Krueppel-like factor 16	1	GGPGAAPGGAS(0.428)PAS(0.093)S(0.093)S(0.093)S(0.093)AAS(0.093)S(0.093)PS(0.007)S(0.003)GRAPGAAPS(0.003)AAAK	42.582	0.011856	10299000.0	694.18	602.55	1017.8	812.65	770.84	418.06	789.03	942.64	649.93	1044.9	True	False	663.6646783876622	702.1111459011939	804.1776890599621	741.4062362205198	872.2189712288762	498.8441782900764	965.9900627762411	909.4868169065624	619.7148961592517	855.658484711982	0.7756186495492466	0.8205506734822214	0.9398348797191574	0.8664744748836096	1.0193540843838749	0.5829944857707913	1.1289434745702276	1.0629086640947634	0.7242549536195508	1.0	9.740891284620272	-4.602317580223313	0.5084167031262925	0.9291193541414822	5.36494218752121e-32	0.0806654014965168	0.1541425892040636	58.32129104455428	3.0274096191645	0.08442377890583616	46.501457646994716	2.4985176387763725e-05	4.602317580223313	-0.9291193541414822	
GGPGAAPGGASPASSSSAAS(ph)SPSSGR	ddPTM_K562_Methotrexat_30min_R1	2	GGPGAAPGGASPASSSSAASSPSSGR	26	0	Q9BXK1	Q9BXK1	KLF16	Krueppel-like factor 16	1	GGPGAAPGGASPASSSSAAS(0.919)S(0.081)PSSGR;GGPGAAPGGASPAS(0.002)S(0.008)S(0.006)S(0.027)AAS(0.666)S(0.29)PS(0.001)S(0.001)GR	388.42	0.0	28556000.0	3881.8	4003.5	4861.9	3143.8	3870.4	3907.1000000000004	3845.9	4257.8	3933.5	3871.6	True	False	3711.1607199360783	4665.0103271353955	3841.4536317946845	2868.1879350643826	4379.425440096833	4662.091778685256	4708.4409749073475	4108.050760655986	3750.632443559178	3170.4157234289496	1.1705596501149975	1.4714191242055705	1.2116561255380025	0.9046725052077101	1.3813410675872766	1.470498567185691	1.485117847515263	1.2957451384996732	1.1830096652128312	1.0	11.630456312031644	-10.04721302998543	2.856548421690755	1.0009888917072607	1.3029029327120278	0.2331951257691972	0.16746711070448006	0.4667143155865417	9.207717889228647	0.17360314251805783	0.04660779243202562	8.969886959730035e-11	10.04721302998543	0.30191404100476715	
GGPGAAPGGASPASSSSAASS(ph)PSSGR	ddPTM_K562_Methotrexat_30min_R1	2	GGPGAAPGGASPASSSSAASSPSSGR	26	0	Q9BXK1	Q9BXK1	KLF16	Krueppel-like factor 16	1	GGPGAAPGGASPASSSSAAS(0.215)S(0.785)PSSGR;GGPGAAPGGASPASSSSAAS(0.294)S(0.703)PS(0.002)S(0.001)GR	222.24	8.6417e-51	31706900.0	3634.9	4009.5	4324.1	3596.81	4414.6	4209.1	3982.2	4473.8	4214.799999999999	4236.3	True	False	3475.114148306368	4672.0017251528325	3416.5305023228334	3281.4832517077816	4995.197278795854	5022.449004546627	4875.309719513259	4316.453918226022	4018.8548679581086	3469.065019413696	1.0017437346543865	1.34676107222183	0.9848562892892271	0.9459272839637876	1.4399261042504439	1.447781744199037	1.405367063525731	1.2442701114191117	1.1584835814456231	1.0	11.76033116544396	-7.762505876373026	24.999587716903164	1.3092452311450542	1.0835344707398764	0.2754681613923603	0.16514961039036377	37.226260376780125	872622.5538990044	0.05123309610844729	0.06144716532046499	1.727802601713712e-08	7.762505876373026	-0.2257107604051778	
GGPGSAVS(ph)PYPTFNPSSDVAALHK	ddPTM_K562_Methotrexat_30min_R1	3	GGPGSAVSPYPTFNPSSDVAALHK	24	0	P04083;Q5T3N1;Q5T3N0	P04083	ANXA1	Annexin A1;Annexin	1	GGPGS(0.01)AVS(0.8)PY(0.148)PT(0.041)FNPSSDVAALHK;GGPGS(0.005)AVS(0.984)PY(0.007)PT(0.003)FNPSSDVAALHK;GGPGS(0.024)AVS(0.974)PYPT(0.002)FNPSSDVAALHK	123.76	7.541399999999999e-10	61020000.0	11050.4	7840.599999999999	12942.3	12087.2	9134.5	8152.6	7636.700000000001	10921.0	11564.5	15104.099999999999	True	False	10564.637647375357	9136.125882587183	10225.888096994253	11027.53394258866	10335.84685886847	9727.974568070807	9349.424372208057	10536.902239918269	11026.868919166169	12368.601128278538	0.8541497569374479	0.7386547425884005	0.8267618941655929	0.8915748699645771	0.8356520476060507	0.7865056417600513	0.7558999013099641	0.8519073523866473	0.8915211028962083	1.0	13.594394722271508	-10.020203382285972	1.8774839952834408	0.998543062626447	0.8135537026425637	0.6350427804478822	0.0433743408244488	0.24488949742723487	1.966992518186072	0.04384401385549367	0.012402892180613767	9.545454629026463e-11	10.020203382285972	-0.18498935998388333	
GGPISFSSS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	GGPISFSSSR	10	0	P35580;P35580-5;P35580-2;P35580-3;P35580-4	P35580	MYH10	Myosin-10	1	GGPIS(0.16)FS(0.056)S(0.112)S(0.671)R	80.102	0.030286	23168000.0	1472.6	1407.8	1313.5	1402.2	1290.4	1166.4	1128.4	1189.1	1416.8	1240.7	True	False	1407.8662672414519	1640.4150214914962	1037.8143000395564	1279.2713030559448	1460.1102180397259	1391.790292200989	1381.4724241622123	1147.2786790117034	1350.9332772428231	1015.9972073711891	1.3856989537246784	1.614586151999313	1.0214735754292252	1.2591287591881835	1.4371203064796245	1.3698761001539896	1.3597206903123886	1.1292144020554884	1.3296623922207957	1.0	9.988680721302408	-15.509954327172613	0.1523780291323736	5.204228892195849e-13	1.423301759714018	0.31543204326601526	0.1507524933507922	146.24947368556766	1.5054651327207556	44.78654015635887	0.7746087437741738	3.0906204422884627e-16	15.509954327172613	1.4233017597134976	
GGQVSLTVHGTQQVHS(ph)PPEQSPVQANSSSSK	ddPTM_K562_Methotrexat_30min_R1	1	GGQVSLTVHGTQQVHSPPEQSPVQANSSSSK	31	0	P22670	P22670	RFX1	MHC class II regulatory factor RFX1	1	GGQVSLTVHGTQQVHS(0.723)PPEQS(0.277)PVQANSSSSK	99.641	8.4653e-10	16221000.0	458.75	577.32	809.84	637.02	477.93	474.69	447.1	734.81	511.45	791.75	True	False	438.58389929174007	672.7123172378687	639.8656511184118	581.173445637354	540.7861721231602	566.4171243183195	547.3735562237903	708.966315805727	487.6728011334285	648.3564027856366	0.6764549519483148	1.0375656264788746	0.9869041909191539	0.896379588665071	0.8340878100373416	0.873620005732544	0.8442479381278912	1.0934824006667974	0.7521677877139215	1.0	9.340643273227945	-13.377169022500409	2.2502697385464634	1.716396433333761	0.8985593729255861	0.06680734236219987	0.1198400797882861	6299913.800309943	1313536.147912841	22717223.77061056	0.030476911578131767	4.195956503278558e-14	13.377169022500409	-0.8178370604081748	
GGRILQDDLTCRAVNS(ph)S(ph)CR	ddPTM_K562_Methotrexat_30min_R1	1	GGRILQDDLTCRAVNSSCR	19	2	Q07954	Q07954	LRP1	Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain	2	GGRILQDDLTCRAVNS(1)S(1)CR	77.13	0.021912	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
GGRS(ph)PDEVTLTSIVPTR	ddPTM_K562_Methotrexat_30min_R1	2	GGRSPDEVTLTSIVPTR	17	1	H0YDM6;A0A0C4DGG1;Q9UKS6	H0YDM6	PACSIN3	Protein kinase C and casein kinase substrate in neurons protein 3	1	GGRS(1)PDEVTLTSIVPTR;GGRS(1)PDEVTLTSIVPTR	121.47	0.00017018	38562000.0	1918.7	1731.87	2133.61	2107.9700000000003	1973.99	1922.88	1814.46	2108.66	1599.41	2002.3999999999999	True	False	1834.35624538651	2018.032080743343	1685.7944185058223	1923.1675429345598	2233.6042849567866	2294.4493459082983	2221.3988432695555	2034.4972326001355	1525.0537782008355	1639.7459563472805	1.1186831949704854	1.2306980071710238	1.0280826807227625	1.1728448150703985	1.3621648379803861	1.399271232855755	1.3547213424559819	1.2407392893544364	0.930054910211863	1.0	10.679256602000725	-9.756827805805175	24.96974024873617	0.965027391130437	1.2423133325596762	0.49838495678671857	0.10964686539086203	95.19337046109123	515454.761193421	0.09059517909651132	0.03167076055742619	1.7505406260247872e-10	9.756827805805175	0.27728594142923924	
GGS(ph)PDLWK	ddPTM_K562_Methotrexat_30min_R1	4	GGSPDLWK	8	0	Q96JM3	Q96JM3	CHAMP1	Chromosome alignment-maintaining phosphoprotein 1	1	GGS(1)PDLWK;GGS(1)PDLWK;GGS(1)PDLWK;GGS(1)PDLWK	126.31	0.0015994000000000002	311286000.0	16253.699999999999	11805.599999999999	21885.7	17407.6	13070.699999999999	11741.699999999999	11535.699999999999	15596.0	15535.1	19955.9	True	False	15539.206809630856	13756.274739110686	17292.190655786606	15881.502735042543	14789.726152303041	14010.617347339119	14122.874373810726	15047.479840103042	14812.876591823106	16341.693133375291	0.9508933182629965	0.8417900536276561	1.0581639561246	0.9718394908913763	0.9050302212625321	0.8573540839978617	0.8642234472612276	0.920802986403592	0.9064468700351604	1.0	13.996269845810227	-7.812192111584002	7.979015606663117	0.9000013730533987	0.9548067534184753	0.11285179297296677	0.0611180322231471	0.4884282664093761	67.29320816525522	0.01923894208293798	0.021949358240549187	1.5410186275285552e-08	7.812192111584002	0.05480538036507665	
GGS(ph)PQMDDIKVFQNEVLGTLQR	ddPTM_K562_Methotrexat_30min_R1	1	GGSPQMDDIKVFQNEVLGTLQR	22	1	A0A3B3ITG6;A0A3B3IUB1;Q13144	A0A3B3ITG6	EIF2B5	Translation initiation factor eIF-2B subunit epsilon	1	GGS(1)PQMDDIKVFQNEVLGTLQR	85.166	0.0011965	30739000.0	2064.4	1847.0	2723.2	1649.5	1633.9	1628.2	1456.6	2496.8	2289.0	2211.4	True	False	1973.6514478427653	2152.1853563679474	2151.6375347298954	1504.8908960139647	1848.786488883375	1942.8266064486027	1783.2796287085048	2408.986128800287	2182.584889616616	1810.894031095872	1.0898768309752502	1.1884656525514865	1.1881631380870037	0.8310209599085553	1.0209247239964516	1.072854939652593	0.9847509562055069	1.3302744873163432	1.2052526830053183	1.0	10.8224864105827	-9.246455570797984	24.97662445693573	1.2008227055817386	1.0549846559009113	0.17173899920255675	0.12265816351131528	1198.743492320692	1998200.1786946193	0.059888816484283465	0.03440664551386548	5.669495686416491e-10	9.246455570797984	-0.14583804968082736	
GGSDGTPRGS(ph)PSPASVSSGR	ddPTM_K562_Methotrexat_30min_R1	1	GGSDGTPRGSPSPASVSSGR	20	1	P10398;Q96II5	P10398	ARAF	Serine/threonine-protein kinase A-Raf	1	GGS(0.001)DGT(0.018)PRGS(0.833)PS(0.147)PAS(0.001)VSSGR	90.755	0.0033663000000000005	2752300.0	1065.1	942.84	1817.2	1114.0	1336.1	1067.2	902.28	1296.0	1163.8	1395.3	True	False	1018.2794793147298	1098.628284460181	1435.7945535073331	1016.3373495965783	1511.8205690660848	1273.4212961564608	1104.6392581292807	1250.4189454202067	1109.6951920208903	1142.5976492665595	0.891196896797722	0.9615180682065969	1.2566055552704651	0.8894971473545141	1.323143426766659	1.1144966882908238	0.9667788646671516	1.09436506037174	0.9712038115369925	1.0	10.15810175155816	-6.5372183864176625	24.97476906098234	1.081822566711039	0.9087770940066543	0.19362569343142377	0.12628316911618448	287.28843244751715	500357.9026159058	0.0308615889952375	0.08172420441141182	2.902562724157012e-07	6.5372183864176625	-0.17304547270438475	
GGSDGYGSGRGFGDGY(ph)NGYGGGPGGGNFGGSPGYGGGR	ddPTM_K562_Methotrexat_30min_R1	1	GGSDGYGSGRGFGDGYNGYGGGPGGGNFGGSPGYGGGR	38	1	P22626;P22626-2	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	1	GGS(0.001)DGY(0.025)GS(0.215)GRGFGDGY(0.71)NGY(0.049)GGGPGGGNFGGSPGYGGGR	76.469	4.6389999999999994e-08	21008000.0	527.92	532.87	804.17	478.55	628.34	701.29	520.37	718.18	652.95	453.36	True	False	504.7132689135597	620.9177102586831	635.3857066332772	436.5962644968067	710.9777234989781	836.8043672990668	637.076218859704	692.9212023317006	622.5944970184227	371.2521108517794	1.3594892908637604	1.6724961073866635	1.7114669198122132	1.176010187511407	1.915080622350542	2.2540056819586862	1.7160204622083715	1.8664438048362937	1.67701267903899	1.0	8.536255418534557	-10.058223691125047	20.772950549807135	0.9999999973108091	1.7187992251523836	0.3669319571851595	0.2779748714294821	3043.868410412138	1085986.037709694	0.284468391268891	0.07344942284414144	8.745332152600105e-11	10.058223691125047	0.7187992278415745	
GGSGS(ph)GPTIEEVD	ddPTM_K562_Methotrexat_30min_R1	1	GGSGSGPTIEEVD	13	0	A0A0G2JIW1;P0DMV8-2;P0DMV9;P0DMV8;V9GZ37	A0A0G2JIW1	HSPA1A;HSPA1B	Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B	1	GGS(0.012)GS(0.584)GPT(0.404)IEEVD	105.03	0.0032367	11874000.0	2045.6	1562.6	1960.6	1891.0	1563.6	1613.8	1754.4	2422.6	2362.3	1969.9	True	False	1955.6778733322792	1820.7930903413928	1549.096853184282	1725.218965966903	1769.2408066699588	1925.64401024859	2147.868859402858	2337.3957848572486	2252.4771886156973	1613.1320212787186	1.2123483059880162	1.1287316018301234	0.9603038268103584	1.06948404917245	1.0967737192815092	1.193729951949094	1.3314898167480782	1.4489798441942843	1.396337781969125	1.0	10.655648800433912	-8.547084048863981	2.6521133400913315	1.3320854466765584	1.087000360938222	0.33923407702634656	0.1273974628219411	0.2662101622360546	3.7948140136894466	0.05240507263673299	0.04053409703090064	2.8373698600751224e-09	8.547084048863981	-0.24508508573833643	
GGSISVQVNSIKFDS(ph)E	ddPTM_K562_Methotrexat_30min_R1	4	GGSISVQVNSIKFDSE	16	1	A0A0A0MRM9;Q14978;Q14978-3;Q14978-2	A0A0A0MRM9	NOLC1	Nucleolar and coiled-body phosphoprotein 1	1	GGSISVQVNS(0.047)IKFDS(0.953)E;GGSISVQVNS(0.243)IKFDS(0.757)E;GGSISVQVNS(0.001)IKFDS(0.999)E;GGSISVQVNS(0.001)IKFDS(0.999)E	176.81	6.414700000000001e-22	201204300.0	28343.100000000002	22291.3	36736.6	30628.800000000003	22091.2	20593.199999999997	20228.500000000004	27548.5	27324.8	34988.0	True	False	27097.17126106969	25974.558437685344	29026.0896953431	27943.620658279793	24996.58001298758	24572.544449034132	24765.25605473708	26579.603640361565	26054.476012143343	28651.334159348095	0.9457560025081301	0.9065741334495798	1.0130798633638054	0.9752991083370757	0.8724403503852864	0.857640496333286	0.8643665916917486	0.9276916562606009	0.9093634476928024	1.0	14.806314699692551	-6.231054537067853	20.685676170807373	0.9215589120868469	0.9457563966115915	0.009507112711411358	0.052532980247843857	6280.467600799882	4274937.254332256	0.01411928407801702	1.036332227120318	5.874155824581482e-07	6.231054537067853	0.024197484524744572	
GGSQRGRAFKS(ph)TR	ddPTM_K562_Methotrexat_30min_R1	1	GGSQRGRAFKSTR	13	3	P49959-2	P49959-2	MRE11A	Double-strand break repair protein MRE11A	1	GGSQRGRAFKS(0.953)T(0.047)R	65.528	0.034018	8906400.0	0.0	0.0	72.402	204.07	125.56	54.68600000000001	0.0	71.154	66.556	0.0	True	False	0.0	0.0	57.205809631872064	186.17949993911463	142.07334080677919	65.25329554124082	0.0	68.65147348952887	63.461826087078855	0.0											0.0														
GGSRPSSNLSSLSNAS(ph)ERDQHHLGSPSR	ddPTM_K562_Methotrexat_30min_R1	1	GGSRPSSNLSSLSNASERDQHHLGSPSR	28	2	Q9H8M2-2;Q9H8M2-3;Q9H8M2-1;Q9H8M2-6;Q9H8M2	Q9H8M2-2	BRD9	Bromodomain-containing protein 9	1	GGS(0.006)RPS(0.006)S(0.006)NLS(0.032)S(0.013)LS(0.141)NAS(0.398)ERDQHHLGS(0.344)PS(0.056)R	40.83	0.023997	97970000.0	1283.0	1350.4	1368.5	1537.4	1238.6	1503.3	1263.4	1442.4	1208.1	1262.8	True	False	1226.6008562208224	1573.530647124674	1081.2705516590277	1402.618528967487	1401.497610092997	1793.791449130441	1546.749610675769	1391.6699744398966	1151.935694690185	1034.0946832178108	1.1861591362253083	1.5216504568307911	1.0456204535298632	1.356373407319854	1.3552894457709928	1.7346491363331142	1.4957524062136367	1.345785832791841	1.1139557270574938	1.0	10.014152571625377	-9.832587262394467	3.009955571139682	1.0068082324884027	1.3905981734758286	0.3593935062132654	0.17618709597031396	0.2746354040845827	4.694908684210801	0.1745962165343694	0.04788805043084778	1.4703229550708402e-10	9.832587262394467	0.3837899409874259	
GGTTSWGTSGQPS(ph)PSYDSSR	ddPTM_K562_Methotrexat_30min_R1	1	GGTTSWGTSGQPSPSYDSSR	20	0	Q99081;Q99081-3;H0YNQ5	Q99081	TCF12	Transcription factor 12	1	GGTTSWGT(0.004)S(0.017)GQPS(0.787)PS(0.181)YDS(0.006)S(0.006)R	186.45	1.7456e-13	144720000.0	631.95	607.23	599.99	659.8	665.15	603.7	576.43	645.02	762.88	655.96	True	False	604.1702346755642	707.564436354796	474.06029834848385	601.9563584055853	752.6288837020485	720.3564809685676	705.7091009037787	622.3342809991839	727.4138753126797	537.1592876176395	1.1247506067615913	1.317233924210679	0.8825320706098062	1.1206291546690517	1.4011279355143245	1.3410481724395529	1.3137799479064696	1.1585656160937006	1.3541865366208974	1.0	9.069206153925931	-5.954210701843593	12.552929819434638	1.2155026072224524	0.7838581972943816	0.0235356232188485	0.16093878699929692	801358.0688383539	7797576.489162362	0.04134996535581901	7615811.280756926	1.1111924915309652e-06	5.954210701843593	-0.43164440992807085	
GGVTGS(ph)PEASISGSK	ddPTM_K562_Methotrexat_30min_R1	2	GGVTGSPEASISGSK	15	0	Q09666	Q09666	AHNAK	Neuroblast differentiation-associated protein AHNAK	1	GGVT(0.35)GS(0.647)PEAS(0.003)ISGSK;GGVT(0.017)GS(0.98)PEAS(0.003)ISGSK	206.63	9.9252e-14	41582000.0	5093.8	4023.2	5914.4	4833.2	3920.9	3565.3999999999996	3794.1	4779.200000000001	5051.299999999999	5365.2	True	False	4869.882651143906	4687.965417292649	4673.048265058201	4409.480860027092	4436.5670752572505	4254.363089689134	4645.023506304369	4611.112827123651	4816.466165539713	4393.510290149034	1.1084263674226453	1.0670204705799442	1.063625200909609	1.0036350364112876	1.0098000874618998	0.9683289235097752	1.0572465294366715	1.0495281728285735	1.0962683247468465	1.0	12.10115835757619	-6.684114193457502	1.6981220779084925	1.0273558827307814	1.1056287334307113	0.35236156710602784	0.03455686459671102	0.5763487865851177	2.810540645832514	0.010675950854432936	0.05695382222986766	2.0695970970640922e-07	6.684114193457502	0.07827285069992995	
GGVTGS(ph)PEASISGSKGDLK	ddPTM_K562_Methotrexat_30min_R1	1	GGVTGSPEASISGSKGDLK	19	1	Q09666	Q09666	AHNAK	Neuroblast differentiation-associated protein AHNAK	1	GGVT(0.05)GS(0.95)PEAS(0.001)ISGSKGDLK	90.882	0.0040985	0.0	1735.3	1320.6	2148.3	2057.4	1258.0	1156.7	952.51	1461.9	1519.0	2514.9	True	False	1659.0182897895504	1538.8067036380664	1697.4011882565505	1877.0309363195693	1423.4490501348212	1380.215904482925	1166.1346142668813	1410.4841483871912	1448.3820215498652	2059.427240120742	0.8055726648018329	0.747201296389499	0.8242103217771527	0.9114334800240482	0.6911868612805985	0.6701940605592865	0.5662422014960392	0.6848914692924504	0.7032936116087053	1.0	11.008027441132269	-7.7954175752505135	24.719059936280228	0.6934375135982719	0.8169046366178023	0.14540391792777818	0.11173663688500543	244.01732786976854	177520.53031089494	0.033390377434312384	0.03786333560893213	1.6017046070157865e-08	7.7954175752505135	0.12346712301953044	
GGWDHGDTQSIQS(ph)SR	ddPTM_K562_Methotrexat_30min_R1	2	GGWDHGDTQSIQSSR	15	0	Q9P206;Q9P206-3;Q9P206-2;Q9P206-4	Q9P206	KIAA1522	Uncharacterized protein KIAA1522	1	GGWDHGDTQSIQS(0.78)S(0.22)R;GGWDHGDTQSIQS(0.783)S(0.217)R	133.23	6.7608e-09	0.0	1977.3899999999999	1594.4099999999999	1791.9299999999998	2199.8	1866.1	1381.46	1591.54	2086.66	2141.6	2521.5	True	False	1890.466303259932	1857.8591521638418	1415.8283811723493	2006.946949409833	2111.5248588685154	1648.4075935047829	1948.4833586947245	2013.2709850698539	2042.0374834438373	2064.8319161654344	0.9155545729701263	0.8997628996427185	0.6856869898648511	0.9719662572520195	1.0226134351844938	0.7983253167483064	0.9436522863871754	0.975028993550558	0.9889606352250074	1.0	11.011808631157079	-8.879909703451746	0.5010413920325856	1.0092633434781093	0.8582445645162852	0.21436449878872077	0.08779428545179309	1.5607984330036198	0.8549732673165734	0.09102291680869526	0.07584511001674132	1.3185308530421571e-09	8.879909703451746	-0.15101877896182414	
GHAVGDIPGVR	ddPTM_K562_Methotrexat_30min_R1	1	GHAVGDIPGVR	11	0	D6RD47;P62266	D6RD47	RPS23	40S ribosomal protein S23	0		144.77	2.8176e-07	12530000.0	1500.3	1571.6	2097.7	1965.0	1786.2	1346.9	1394.1	1731.8	1852.5	1837.0	False	True	1434.3486084084957	1831.28018736755	1657.421436766637	1792.7315008593137	2021.1166083869796	1607.1693626247536	1706.7624127300076	1670.8916124064147	1766.3776793424113	1504.30149910605	0.9534980914802487	1.2173624691963754	1.1017880642621047	1.1917368306318028	1.3435581960052911	1.0683824775683826	1.1345879890063744	1.1107425030150957	1.1742178548596165	1.0	10.554878032311105	-11.532737695752996	10.235051014724373	1.0000000201119816	1.1486994693459207	0.16474969686760021	0.09673824246679955	0.0	0.0	0.09183919748385007	0.0222742771645808	2.9326639745349844e-12	11.532737695752996	0.14869944923393907	
GHEEGFLNNS(ph)GEFLFNK	ddPTM_K562_Methotrexat_30min_R1	1	GHEEGFLNNSGEFLFNK	17	0	Q16659	Q16659	MAPK6	Mitogen-activated protein kinase 6	1	GHEEGFLNNS(1)GEFLFNK	127.67	4.8103000000000003e-05	5680800.0	5868.3	4904.2	7482.6	6365.4	4369.4	5280.1	4828.2	6630.7	6780.3	8243.7	True	False	5610.336558504021	5714.535692853104	5912.104515779201	5807.355264921055	4944.052686533456	6300.40459692253	5911.04675499822	6397.494522683464	6465.085332925964	6750.686046913744	0.8310765038568096	0.8465118438541007	0.8757783245574097	0.8602614941004466	0.7323778134807145	0.9332984163591681	0.8756216351818958	0.9476806473037285	0.9576930830432635	1.0	12.720818409964215	-9.220557219693056	1.0145847502417458	0.9906470311846921	0.8381426914847002	0.6158983220619936	0.045216055350625416	0.37555361589464675	0.6887827471810959	0.03973211130871024	0.016314174939507615	6.017869703097291e-10	9.220557219693056	-0.1525043396999919	
GHGQPGADAEKPFY(ph)VNVEFHHER	ddPTM_K562_Methotrexat_30min_R1	3	GHGQPGADAEKPFYVNVEFHHER	23	1	P11274;P11274-2	P11274	BCR	Breakpoint cluster region protein	1	GHGQPGADAEKPFY(1)VNVEFHHER;GHGQPGADAEKPFY(1)VNVEFHHER;GHGQPGADAEKPFY(1)VNVEFHHER	75.797	0.00068777	72313000.0	5138.799999999999	4174.799999999999	6121.3	5379.0	3920.8	3829.5	4010.3	4879.6	4875.7	6814.1	True	False	4912.904505025379	4864.61474053324	4836.522782513999	4907.431421436263	4436.45392350446	4569.496676940747	4909.711859817192	4707.981702216389	4649.0297712117645	5580.000460020977	0.880448763440946	0.8717946844963079	0.866760283832632	0.8794679241689193	0.7950633616054904	0.8189061469940397	0.8798766048486554	0.8437242498361175	0.8331593885198869	1.0	12.446049525653818	-12.356765810729737	5.516834068955428	1.0000418851154635	0.8518587493826802	0.7184419976147822	0.027769730202965293	1.529803511320922e-05	1.7836664475229184e-06	0.028752120363599056	0.006971444340244321	4.3977869809273277e-13	12.356765810729737	-0.1481831357327833	
GHHS(ph)PAPAR	ddPTM_K562_Methotrexat_30min_R1	2	GHHSPAPAR	9	0	A0A087WW83;A0A087X0K8;Q6PRD1	A0A087WW83	GPR179	Probable G-protein coupled receptor 179	1	GHHS(1)PAPAR;GHHS(1)PAPAR	82.45200000000001	0.019556999999999998	16685600.0	683.84	743.9000000000001	524.35	615.31	697.15	619.13	654.97	633.9300000000001	576.62	601.36	True	False	653.7792124068958	866.8168308620004	414.29610066672353	561.3667276304047	788.83744459578	738.7681100912195	801.8636951909997	611.6343225850555	549.8130620579873	492.44787670245694	1.3276109885674605	1.7602204656996456	0.8412993948536127	1.1399515648020337	1.6018699275911494	1.5001955436140346	1.6283219669063485	1.2420285506776843	1.1164898623173292	1.0	8.943827219922584	-9.692841035996613	2.858117276651967	1.0316356218203042	1.395294990384327	0.2285712179321826	0.2502993942499474	0.4253965601388802	6.470897947993969	0.23435821075884902	0.06961354364886845	2.0284250443123807e-10	9.692841035996613	0.3636593685640228	
GHHVT(ph)DS(ph)ENDEPLNLNAS(ph)DSESEELHR	ddPTM_K562_Methotrexat_30min_R1	1	GHHVTDSENDEPLNLNASDSESEELHR	27	0	B8ZZB6;Q96ST2	B8ZZB6	IWS1	Protein IWS1 homolog	3	GHHVT(0.577)DS(0.946)ENDEPLNLNAS(0.826)DS(0.554)ES(0.098)EELHR	93.125	1.4718e-05	0.0	651.43	613.88	497.46	434.17	321.4	296.0	369.01	525.98	461.07	342.68	True	False	622.7939172002574	715.3132358241228	393.0499441931311	396.10699019241173	363.6697334764162	353.1978107780286	451.76988589161465	507.4809852716982	439.63495633706117	280.61733136290735	2.219370821379637	2.5490700533355386	1.4006616850219444	1.4115556878422018	1.295963195537989	1.2586457474405128	1.6099144115491744	1.808444912532506	1.5666707191670384	1.0	8.132460304574174	-6.765945548227571	24.998807895247086	1.4442889470433116	2.384220572758682	0.7534193427654841	0.22049971109458308	49.544878035661135	274865.65846021054	0.059470823759184985	0.13089696644003357	1.714172216672876e-07	6.765945548227571	0.9399316257153703	
GHHVTDS(ph)ENDEPLNLNAS(ph)DS(ph)ESEELHR	ddPTM_K562_Methotrexat_30min_R1	1	GHHVTDSENDEPLNLNASDSESEELHR	27	0	B8ZZB6;Q96ST2	B8ZZB6	IWS1	Protein IWS1 homolog	3	GHHVT(0.282)DS(0.749)ENDEPLNLNAS(0.896)DS(0.692)ES(0.381)EELHR	71.42	0.00099317	16000000.0	389.23	324.97	337.58	280.12	228.07	293.57	134.35	240.06	321.92	199.55	True	False	372.11991525084255	378.66576895446224	266.7265713036569	255.5623145143569	258.0652025947924	350.29824766927686	164.48140746738142	231.61695373269671	306.95400946499836	163.4095613209647	2.277222411239049	2.3172803714385903	1.632258046270375	1.5639373390911209	1.5792539953516405	2.1436826880725195	1.0065592621248851	1.417401477981823	1.87843359338128	1.0	7.352348589823665	-3.0000000000000004	0.25838444144404266	1.2976495583386431	8.37376351479799	0.46895300980482224	0.3281657455734671	46.66848421710706	0.6424910925148151	0.4093773627368415	145.1410772396056	0.000999999999999999	3.0000000000000004	7.076113956459347	
GHHVTDSENDEPLNLNAS(ph)DSESEELHR	ddPTM_K562_Methotrexat_30min_R1	1	GHHVTDSENDEPLNLNASDSESEELHR	27	0	B8ZZB6;Q96ST2	B8ZZB6	IWS1	Protein IWS1 homolog	1	GHHVTDSENDEPLNLNAS(0.783)DS(0.214)ES(0.003)EELHR	133.28	1.1524000000000001e-17	14068000.0	914.38	1105.5	1197.4	1001.2	1395.5	1047.4	1004.5	1244.3	908.31	1056.2	True	False	874.1849500476976	1288.165084712921	946.0821034391813	913.4263504632808	1579.0327102250744	1249.7952263814443	1229.7846952064351	1200.5372637240464	866.0828663554689	864.9119452127433	1.010721328207201	1.4893598034376434	1.0938478866845487	1.056091727625064	1.825657188532271	1.444997069700582	1.421861152471358	1.3880456506225602	1.0013538038747258	1.0	9.756409452383831	-9.765267636553972	24.67721327978105	1.0006766049360158	1.3507853550639297	0.259220065821937	0.22989731700659014	119.82201405931649	772316.7272865658	0.1999730070321716	0.059344143645426506	1.7168500420496813e-10	9.765267636553972	0.35010875012791387	
GHLS(ph)EGLVTK	ddPTM_K562_Methotrexat_30min_R1	2	GHLSEGLVTK	10	0	Q16659	Q16659	MAPK6	Mitogen-activated protein kinase 6	1	GHLS(0.988)EGLVT(0.012)K;GHLS(0.998)EGLVT(0.002)K	92.611	0.012561	20609000.0	2526.9	2287.8	2842.8	2272.65	2429.7	1993.93	2409.3	2711.6	2414.3999999999996	2882.8	True	False	2415.8205016246284	2665.820064049046	2246.135129160601	2073.4103030167544	2749.248137609361	2379.228752853497	2949.6468553119607	2616.231491050489	2302.155070987487	2360.6969850968544	1.0233505260843598	1.129251268112105	0.9514711728529813	0.8783042957678394	1.1645917095524927	1.0078501255661503	1.2494813497594834	1.1082453646388464	0.9752014280193755	1.0	11.204997156320424	-7.784319685325079	24.999690195190713	1.0940843118700638	1.0019894604221893	0.16117193100142968	0.09707906060889573	434.5501258791625	474799.6715571545	0.030854662438867392	0.035008580289429866	1.6431617421986654e-08	7.784319685325079	-0.09209485144787455	
GHLSRPEAQSLS(ph)PYTTSANR	ddPTM_K562_Methotrexat_30min_R1	2	GHLSRPEAQSLSPYTTSANR	20	1	O94776;O94776-2	O94776	MTA2	Metastasis-associated protein MTA2	1	GHLSRPEAQS(0.001)LS(0.987)PY(0.003)T(0.005)T(0.002)S(0.001)ANR;GHLSRPEAQSLS(0.997)PYT(0.002)T(0.001)SANR	218.64	2.4666999999999995e-35	222687000.0	4353.7	4630.5	5330.799999999999	5671.4	5188.5	4541.3	4438.0	5237.3	5381.5	5609.0	True	False	4162.316560973186	5395.611419957649	4211.937929692323	5174.197167416546	5870.878693660191	5418.841952994127	5433.334472201255	5053.101190470101	5131.315239611978	4593.155747678733	0.9061997436243519	1.1747068282377442	0.9170030717597444	1.1265015713937976	1.2781797561790034	1.179764469282949	1.182919711561518	1.1001371318670856	1.1171655222458365	1.0	12.16526998888154	-6.253254220961336	24.2686084988167	1.1254262473963905	0.9061995781039776	0.30682546362113305	0.0958651427788864	892.6630870539301	2646614.6401547715	0.024812243869161688	0.2670221449728479	5.581433812721689e-07	6.253254220961336	-0.21922666929241297	
GHLSRPEAQSLSPY(ph)TTSANR	ddPTM_K562_Methotrexat_30min_R1	1	GHLSRPEAQSLSPYTTSANR	20	1	O94776;O94776-2	O94776	MTA2	Metastasis-associated protein MTA2	1	GHLSRPEAQS(0.002)LS(0.002)PY(0.616)T(0.281)T(0.087)S(0.013)ANR	150.9	5.4448e-13	263540000.0	1553.6	1365.5	1393.8	1608.9	1605.5	1257.2	1267.2	1664.8	1532.2	1432.9	True	False	1485.3056042281141	1591.1256654685596	1101.2604274039845	1467.8502349783969	1816.651391090189	1500.1361071288432	1551.401857407262	1606.2480403823781	1460.9683564310092	1173.3879249151107	1.265826563142423	1.3560099193825181	0.9385305609682797	1.2509505201228224	1.5482104021324536	1.2784656082406602	1.322155976268035	1.3688977074641218	1.2450855556031937	1.0	10.196464335393408	-5.934072895083847	13.412979495078238	1.2721746987666267	1.217395650458108	0.0	0.16783887012012924	41175999.762228034	236764121.183308	0.04219162749461988	59877776.58491616	1.163930650590864e-06	5.934072895083847	-0.05477904830851865	
GHLSRPEAQSLSPYT(ph)TSANR	ddPTM_K562_Methotrexat_30min_R1	1	GHLSRPEAQSLSPYTTSANR	20	1	O94776;O94776-2	O94776	MTA2	Metastasis-associated protein MTA2	1	GHLSRPEAQSLS(0.318)PY(0.005)T(0.504)T(0.164)S(0.009)ANR	159.53	2.6482e-14	190900000.0	1748.7	1876.7	1974.8	1955.8	2056.9	1963.3	1807.2	1850.4	1950.6	2053.8	True	False	1671.829241834259	2186.792776554263	1560.3164672387634	1784.3380505753942	2327.418403197388	2342.679938853052	2212.510603461494	1785.320383183295	1859.9170317545522	1681.836918271096	0.9940495559776837	1.3002406789846512	0.9277454016425957	1.0609459402340078	1.3838549849351272	1.3929293104478246	1.3155321894919056	1.0615300233857266	1.1058842932681725	1.0	10.715822104043387	-6.232342085823633	22.569840954326928	1.1808914358428277	0.9940484855638664	0.10029570179095271	0.1579846244409893	7044.676687493545	5464003.227479099	0.04215590943105522	3.508954625457657	5.856766559823847e-07	6.232342085823633	-0.18684295027896136	
GHNSSNS(ph)PSLQAGGAEGAGDR	ddPTM_K562_Methotrexat_30min_R1	1	GHNSSNSPSLQAGGAEGAGDR	21	0	Q8IWZ3-6;H7C0V5	Q8IWZ3-6	ANKHD1;ANKHD1-EIF4EBP3	Ankyrin repeat and KH domain-containing protein 1	1	GHNSS(0.001)NS(0.867)PS(0.131)LQAGGAEGAGDR	85.182	0.001215	4943300.0	2982.1	2704.3	3009.4	2695.1	2775.4	2624.3	2620.2	3246.1	2895.4	3322.3	True	False	2851.010454665718	3151.1396097595207	2377.768065884308	2458.8247674126906	3140.4137470144565	3131.4088338675047	3207.8465489098066	3131.9328230930037	2760.7934859746388	2720.599276254779	1.0479347250986795	1.1582520208920406	0.8739868773168175	0.9037805710209365	1.1543095576124687	1.1509996570234529	1.1790955679903659	1.15119225768687	1.014774027939606	1.0	11.409708758804099	-7.780915036153947	24.993058779169026	1.1216200509926728	0.9988643616890808	0.25649390517457016	0.09206785539486899	326.7441162930687	419307.81636496715	0.030097328626525935	0.03417550231732005	1.656093924173989e-08	7.780915036153947	-0.12275568930359204	
GHQQLYWSHPR	ddPTM_K562_Methotrexat_30min_R1	2	GHQQLYWSHPR	11	0	A0A2R8Y851;P62273;P62273-2	A0A2R8Y851	RPS29	40S ribosomal protein S29	0	;	187.42	4.4439e-06	54752000.0	3089.9	2605.2	2150.3	3017.3	2768.8999999999996	2401.17	2754.7	3377.2	3355.3	3341.8	False	True	2954.071695741795	3035.6650191715084	1698.981415588167	2752.7779936604643	3133.0588830829174	2865.1621192766206	3372.5115976955367	3258.4219617848166	3199.312835356328	2736.5676372959156	1.0794806075616685	1.1092965427929784	0.6208439332663385	1.0059236088827561	1.1448863314698798	1.0469911579118771	1.232387444670659	1.190696665917076	1.1690969343325512	1.0	11.418151799451774	-7.6526412638981895	4.6232888853521965	1.1408182252914398	0.9336846588778884	0.2864853357386574	0.13835215342820728	0.2668138296638354	9.633888893773115	0.04289346800542356	0.055700153520245356	2.2251471486792167e-08	7.6526412638981895	-0.2071335664135514	
GHSAQIAKPIRPGQHPAAS(ph)PTHPSAIR	ddPTM_K562_Methotrexat_30min_R1	1	GHSAQIAKPIRPGQHPAASPTHPSAIR	27	2	P33176	P33176	KIF5B	Kinesin-1 heavy chain	1	GHS(0.062)AQIAKPIRPGQHPAAS(0.881)PT(0.056)HPS(0.001)AIR	44.474	0.015028	24297000.0	2667.6	2059.8	3337.7	2982.9	2249.7	2288.9	2025.4	2925.2	2270.5	2901.0	True	False	2550.3354980940517	2400.1469393864077	2637.1623823692626	2721.3937882510186	2545.5749825821226	2731.1975307088856	2479.647507885631	2822.3190579808565	2164.9449505786497	2375.600788735247	1.0735539027379395	1.0103326075523946	1.1101033451724307	1.1455602309762951	1.0715499820731111	1.1496870785949502	1.0437980655856651	1.1880443344537863	0.9113252364810213	1.0	11.214076701397753	-9.77338188979019	24.999526946708094	0.9556625735134693	1.0969640030238432	0.5307273311527316	0.05391359196002127	190.65653483793383	399092.70949993446	0.0487288796353331	0.012972390011769934	1.685070634266273e-10	9.77338188979019	0.14130142951037394	
GHSTGYES(ph)DNHTTPILCGAQYR	ddPTM_K562_Methotrexat_30min_R1	4	GHSTGYESDNHTTPILCGAQYR	22	0	J3KNN9;A0A1W2PQQ0;P19544-8;A0A1W2PR07;P19544-9;P19544-2;P19544-3	J3KNN9	WT1	Wilms tumor protein	1	GHS(0.004)T(0.01)GY(0.003)ES(0.981)DNHT(0.002)TPILCGAQYR;GHS(0.015)T(0.044)GY(0.006)ES(0.814)DNHT(0.11)T(0.01)PILCGAQYR;GHST(0.001)GYES(0.999)DNHTTPILCGAQYR;GHS(0.041)T(0.165)GY(0.108)ES(0.686)DNHT(0.001)TPILCGAQYR	104.77	3.4105e-05	231223000.0	2734.35	2366.95	2103.77	2512.05	1953.67	1889.73	2247.33	2710.8	3134.49	3304.51	True	False	2614.151248018243	2758.048256229079	1662.2174267180944	2291.8224767092324	2210.611848789267	2254.8935775728523	2751.3509597593606	2615.459627503934	2988.768244060456	2706.0312176434045	0.9660462270257264	1.0192226306357894	0.6142639507927281	0.8469312777201096	0.8169203054185079	0.8332843918691251	1.0167476789700245	0.9665297319746567	1.1044840224213222	1.0	11.401962767464912	-8.764290516778315	24.516264090537465	1.019151221055821	0.8448792833382088	0.3939812491214645	0.10469196583099663	65.26923364072688	561220.7652067525	0.04439100359480966	0.03144053445732478	1.7207171340701669e-09	8.764290516778315	-0.17427193771761207	
GHTAS(ph)ESDEQQWPEEK	ddPTM_K562_Methotrexat_30min_R1	1	GHTASESDEQQWPEEK	16	0	Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5	Q9NTI5-2	PDS5B	Sister chromatid cohesion protein PDS5 homolog B	1	GHT(0.001)AS(0.994)ES(0.006)DEQQWPEEK	245.39	7.698899999999998e-65	10824000.0	1743.4	1345.7	2482.3	1814.3	1539.7	1329.5	1238.7	1491.6	2081.2	1718.8	True	False	1666.7622234882178	1568.0540520110153	1961.2991526366122	1655.2431358824708	1742.1975377524532	1586.4070588830718	1516.510006921067	1439.1395825530715	1984.4454662604207	1407.5086644874673	1.184193224199551	1.1140635163208812	1.3934544078638431	1.1760091981282503	1.23778814419367	1.1271028725501657	1.0774427505732562	1.022472982841013	1.4098992896665685	1.0	10.458928088086331	-8.268429916094478	22.085467950508253	1.1256668085720658	1.2222251443407968	0.12440232502397564	0.12425771072403072	245.43892189288474	775417.691531819	0.04225585314253378	0.038185027729445674	5.3897681528448176e-09	8.268429916094478	0.09655833576873096	
GHTAS(ph)ESDEQQWPEEKR	ddPTM_K562_Methotrexat_30min_R1	1	GHTASESDEQQWPEEKR	17	1	Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5	Q9NTI5-2	PDS5B	Sister chromatid cohesion protein PDS5 homolog B	1	GHT(0.045)AS(0.936)ES(0.019)DEQQWPEEKR	69.256	0.02474	21677000.0	931.39	980.94	1505.8	1152.2	831.74	1052.2	862.04	1240.3	1237.3	1187.5	True	False	890.4472108148968	1143.0236618709112	1189.7531579745444	1051.188414905905	941.128388679759	1255.5227584481138	1055.3744137936842	1196.6779459912684	1179.778193063625	972.4322428897295	0.9156907510273397	1.1754275634405575	1.2234818072660907	1.0809888530455751	0.9678087039597264	1.2911159287737497	1.0852935220015736	1.230602908059855	1.2132240592493473	1.0	9.925453919305427	-8.262180361644809	24.998986536611834	1.173537848290729	1.0872272974239332	0.1326236051275217	0.11252891317858107	152.72377183389847	5152520.813092366	0.038269646191455	0.03567198495676687	5.467888354057044e-09	8.262180361644809	-0.08631055086679584	
GHTDTEGRPPS(ph)PPPT(ph)STPEK	ddPTM_K562_Methotrexat_30min_R1	1	GHTDTEGRPPSPPPTSTPEK	20	1	E9PMQ6;Q00613-2;Q00613	E9PMQ6	HSF1	Heat shock factor protein 1	2	GHT(0.001)DT(0.025)EGRPPS(0.904)PPPT(0.657)S(0.244)T(0.169)PEK	67.418	0.022580000000000003	0.0	1477.4	1030.4	1751.6	1566.9	1186.8	1219.1	1292.5	1702.2	1565.6	1470.2	True	False	1412.4552649888108	1200.6560861946568	1383.9630970302894	1429.5323097691908	1342.885002146269	1454.6738213496453	1582.3760264353596	1642.332661183856	1492.8155977211773	1203.93253347072	1.1732013428667447	0.9972785457781278	1.1495354254117327	1.1873857297037296	1.11541549448371	1.208268554016132	1.3143394521233307	1.3641401121118537	1.2399495455261595	1.0	10.233538832611545	-8.416435999947323	3.5811141331391405	1.2603644800027967	1.1223804394033432	0.1701308031385047	0.10269360947889165	0.3248652835981141	7.642448528692794	0.03750617080180624	0.0320949184150994	3.833222247350949e-09	8.416435999947323	-0.13798404059945346	
GHTDTEGRPPS(ph)PPPTST(ph)PEK	ddPTM_K562_Methotrexat_30min_R1	1	GHTDTEGRPPSPPPTSTPEK	20	1	E9PMQ6;Q00613-2;Q00613	E9PMQ6	HSF1	Heat shock factor protein 1	2	GHTDTEGRPPS(1)PPPT(0.312)S(0.171)T(0.517)PEK	106.11	0.00035682	9407200.0	1145.2	980.43	1395.8	1114.3	992.23	895.54	883.99	1130.5	982.1	1580.5	True	False	1094.8583792237623	1142.4293930394297	1102.8406547356014	1016.6110490623589	1122.7256367371021	1068.5904306221482	1082.2472600453332	1090.7396742265007	936.4423853615021	1294.256134641867	0.8459364030959143	0.8826918895428305	0.8521038650829096	0.7854790267953142	0.8674678888408522	0.8256406147287356	0.8361924900937798	0.8427541079635823	0.7235371425306203	1.0	10.337907441104253	-7.007137676569252	24.124236366925818	0.8328019936082344	0.8650850901241921	0.01268633634006211	0.0664632721885491	753.5069829735814	2546787.9021368013	0.016331832630693856	0.03193809286657467	9.83699211856385e-08	7.007137676569252	0.03228309651595773	
GHTDTEGRPPS(ph)PPPTSTPEK	ddPTM_K562_Methotrexat_30min_R1	1	GHTDTEGRPPSPPPTSTPEK	20	1	E9PMQ6;Q00613-2;Q00613	E9PMQ6	HSF1	Heat shock factor protein 1	1	GHT(0.005)DT(0.005)EGRPPS(0.979)PPPT(0.005)S(0.005)T(0.002)PEK	57.051	0.033172	49633000.0	3179.1	3091.2	4317.1	3854.2	2814.9	2980.5	2769.4	3879.2	2955.0	4364.4	True	False	3039.350570546857	3601.96825858397	3410.9997066621745	3516.308270031536	3185.108689367656	3556.4394426483595	3390.5084468936816	3742.76633724851	2817.622694983443	3573.9648680993137	0.8504142269767827	1.007835384934701	0.9544021367160762	0.9838676091691857	0.8911975374457285	0.9950963632554468	0.9486686556873748	1.0472308697424235	0.7883744801559551	1.0	11.803309737489165														
GHVS(ph)PQVELPPYLER	ddPTM_K562_Methotrexat_30min_R1	2	GHVSPQVELPPYLER	15	0	Q8N5D0-5;Q8N5D0-3;Q8N5D0-6;Q8N5D0-2;Q8N5D0-4;Q8N5D0	Q8N5D0-5	WDTC1	WD and tetratricopeptide repeats protein 1	1	GHVS(1)PQVELPPYLER;GHVS(1)PQVELPPYLER	122.22	0.00044203	16662700.0	4478.0	3999.8999999999996	4542.7	5013.8	4023.3	3940.1	4511.6	4523.9	4496.799999999999	4694.9	True	False	4281.152481805805	4660.815488324929	3589.2493496685865	4574.247938426681	4552.434470117196	4701.468561643619	5523.441145737535	4364.7918728290715	4287.744749509828	3844.6081154888366	1.1135471687109681	1.2122992378723398	0.9335800273657329	1.1897826256981388	1.1841088437015796	1.2228732865393315	1.4366720819958623	1.1353021534872598	1.1152618474261964	1.0	11.908620835084763	-6.213877118307351	19.901134878909218	1.1684987020452084	1.1135443202169313	0.006118274738587837	0.12845368786553593	13466.09103743511	5632635.413175376	0.03300723270004183	10.323606756741487	6.111149126928472e-07	6.213877118307351	-0.054954381828277166	
GHYTEGAELVDSVLDVVR	ddPTM_K562_Methotrexat_30min_R1	4	GHYTEGAELVDSVLDVVR	18	0	Q5JP53;P07437;Q5ST81;Q13509;A0A0B4J269;Q13509-2;G3V2A3;Q9BVA1;Q13885;P68371	Q5JP53;Q9BVA1;P68371	TUBB;TUBB3;TUBB2B;TUBB2A;TUBB4B	Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain	0	;;;	182.91	2.1646000000000002e-14	32968400.0	8577.4	5689.6	6139.7	6999.0	7526.9	5836.7	7247.5	13005.7	11930.500000000002	13138.599999999999	False	True	8200.347766288765	6629.709693335715	4851.060873964872	6385.408536648517	8516.819280969623	6964.559669486895	8872.93636486674	12548.28215929906	11375.853659052436	10759.072224362944	0.762179823249055	0.6161971548367654	0.4508809656449823	0.5934906285124973	0.7915942102966887	0.6473197246242367	0.8246934475237353	1.1662977901463114	1.0573266376345023	1.0	13.393266056419861	-9.016428000927469	2.843847435783495	1.0835311767928317	0.6372499699112769	0.7965431734878602	0.09709011297222811	0.12142300697801871	1.970392193320059	0.05391499471672748	0.030410938759917478	9.628796297699901e-10	9.016428000927469	-0.4462812068815548	
GHYTEGAELVDSVLDVVRK	ddPTM_K562_Methotrexat_30min_R1	2	GHYTEGAELVDSVLDVVRK	19	1	Q5JP53;P07437;Q5ST81;Q13509;A0A0B4J269;Q13509-2;G3V2A3;Q9BVA1;Q13885;P68371	Q5JP53;Q9BVA1;P68371	TUBB;TUBB3;TUBB2B;TUBB2A;TUBB4B	Tubulin beta chain;Tubulin beta-3 chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain	0	;	149.59	5.0375e-13	22217000.0	14724.9	8740.7	11903.0	12903.8	10285.3	8829.900000000001	9606.5	17844.0	17729.9	22771.2	False	True	14077.611027097419	10184.952108503143	9404.722964119408	11772.543888441938	11637.997230009294	10536.153207394987	11761.002164759211	17216.416405924523	16905.64081887883	18647.115022560523	0.7549484738022684	0.5461945237201953	0.5043527083273175	0.631333258479863	0.6241178442846986	0.5650285952892792	0.6307143035547303	0.9232750688294117	0.9066089203839446	1.0	14.186664821579553	-9.253231218950443	3.9996109991095907	0.943580867523939	0.5989024835262687	0.8447875543877911	0.06595132958223365	0.08003190058830321	3.033236097041296	0.036326395315845306	0.01811965047219702	5.58172943609856e-10	9.253231218950443	-0.34467838399767026	
GHYTIGK	ddPTM_K562_Methotrexat_30min_R1	2	GHYTIGK	7	0	P68363;Q71U36;Q9BQE3;Q71U36-2;F5H5D3;F8VVB9;F8VQQ4;P68366;F8VRZ4;P0DPH8;P0DPH7;P68366-2;F8VS66;A0A1W2PQM2;P0DPH7-2;F8VWV9;Q6PEY2;C9JJQ8;C9JQ00;C9JDL2;C9JEV8	P68363	TUBA1B;TUBA1A;TUBA1C;TUBA4A;TUBA3E	Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-3E chain	0	;	110.61	0.016346	24879000.0	27421.0	20775.3	29111.0	26014.0	22692.9	19519.6	19491.9	24443.0	25441.0	28218.0	False	True	26215.605672978316	24208.06520527938	23000.998925353262	23733.39300934058	25677.414109542537	23291.486443455447	23863.45475410086	23583.3258355757	24258.25346296913	23107.446761989384	1.1345089720644386	1.0476304653918087	0.9953933535914827	1.0270885076052991	1.1112181442642388	1.007964518250835	1.0327170716824965	1.020594186735036	1.0498024170663791	1.0	14.496070238778893	-6.280822195843621	4.083097531254215	1.0327485238996656	1.1414617685335924	0.4951695468515278	0.031212674867470813	0.17780319566613736	6.359164937760821	0.00788525917306165	0.0549546782662048	5.238148473094531e-07	6.280822195843621	0.10871324463392673	
GIAIAYEDEGS(ph)G	ddPTM_K562_Methotrexat_30min_R1	1	GIAIAYEDEGSG	12	0	H0YCR5;Q9BQC3-2;Q9BQC3-3;Q9BQC3	H0YCR5	DPH2	Diphthamide biosynthesis protein 2	1	GIAIAYEDEGS(1)G	110.38	0.00098738	0.0	1282.1	1321.2	1787.0	1577.6	1203.0	1438.4	1264.2	1537.5	1691.0	1399.6	True	False	1225.740419143193	1539.5058434398118	1411.933120799914	1439.2942573820117	1361.2155860987202	1716.3504426456652	1547.7290310402943	1483.4252535367048	1612.3857790920483	1146.1188775987073	1.0694705785767222	1.343233999133938	1.2319255431497016	1.255798404086626	1.1876739949966386	1.4975326523210921	1.3504088112421821	1.2943031325377918	1.4068224602235335	1.0	10.162540975552242	-6.254239805260498	24.513979193915628	1.2975231113918626	1.069470436821135	0.1988628921839498	0.12785841491605338	988.2907822016804	3364942.3595431508	0.03036687503433016	0.2957052404057508	5.568781714781626e-07	6.254239805260498	-0.22805267457072764	
GIAPAS(ph)PMLGNASNPNKADIPER	ddPTM_K562_Methotrexat_30min_R1	3	GIAPASPMLGNASNPNKADIPER	23	1	J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;H0YKP9;P27448-6;P27448-7;H0YIY6	J3KNR0;P27448-6	MARK3	MAP/microtubule affinity-regulating kinase 3	1	GIAPAS(1)PMLGNASNPNKADIPER;GIAPAS(0.998)PMLGNAS(0.002)NPNKADIPER;GIAPAS(0.997)PMLGNAS(0.003)NPNKADIPER	113.33	3.9395e-06	262469000.0	8198.2	6703.0	10118.300000000001	8987.8	6419.799999999999	6591.400000000001	6511.6	7836.200000000001	7708.5	9586.699999999999	True	False	7837.816944247508	7810.556818480969	7994.607104750847	8199.853528459716	7264.116225799305	7865.094763386141	7971.992057049509	7560.596404399563	7350.1335175228	7850.455732977658	0.9983900566846001	0.9949176307906451	1.0183621660545956	1.044506689466999	0.9253114052073056	1.0018647363804611	1.0154814354995099	0.9630773883151172	0.9362683858781422	1.0	12.938560692121436	-7.742773798405244	24.99944097910926	0.9753216589241752	1.0129863717838614	0.3099495157565728	0.02943541959865806	346.67086176909294	464305.8496293857	0.009036663187161321	0.011645150601628473	1.8081156349697425e-08	7.742773798405244	0.0376647128596862	
GIGLDES(ph)ELDSEAELMR	ddPTM_K562_Methotrexat_30min_R1	1	GIGLDESELDSEAELMR	17	0	Q96RS0	Q96RS0	TGS1	Trimethylguanosine synthase	1	GIGLDES(0.928)ELDS(0.072)EAELMR	97.76700000000001	0.0091101	0.0	903.49	822.03	775.05	1127.3	693.36	740.44	689.28	974.83	849.43	910.23	True	False	863.7736614083794	957.8564853790704	612.3775966849316	1028.4713592461608	784.5489931649288	883.5195507178499	843.868586074556	940.544676361096	809.9401847038189	745.3785266909634	1.158838939515765	1.2850604774347103	0.8215659222214561	1.3797974081866309	1.0525511066811368	1.1853300290795206	1.1321342859457324	1.2618349505405717	1.0866159349927489	1.0	9.541829447421188	-10.003553882801846	24.69135853693402	0.9999999820384536	1.1573821766727763	0.11162038719096501	0.1420786529549311	207.9884040208432	1445059.1417136434	0.12729769536174382	0.03286812353857107	9.918502730030217e-11	10.003553882801846	0.15738219463432268	
GIGLDESELDS(ph)EAELMR	ddPTM_K562_Methotrexat_30min_R1	3	GIGLDESELDSEAELMR	17	0	Q96RS0	Q96RS0	TGS1	Trimethylguanosine synthase	1	GIGLDES(0.001)ELDS(0.999)EAELMR;GIGLDESELDS(1)EAELMR;GIGLDESELDS(1)EAELMR	195.5	1.1672e-11	105527000.0	5993.9	5899.0	5066.43	6565.599999999999	5321.57	4774.8	5671.9	6002.5599999999995	5875.4	7177.0	True	False	5730.415332893213	6873.709484144293	4003.0555798625123	5990.004041751609	6021.449731101717	5697.462523320718	6943.967956935176	5791.446562516605	5602.253936414796	5877.175753448079	0.9750287507620028	1.169559967661603	0.6811189162607499	1.0191977053327586	1.0245481815936834	0.9694218383682119	1.1815144294198145	0.9854131993787699	0.9532221208678353	1.0	12.520907326571637	-7.47455556426385	24.998813129279142	1.023748609313487	0.9455833865768495	0.07328361248798532	0.12482935211637507	1117.3841283662691	578050.4434370629	0.03524703250184431	0.05227840124869356	3.353084018644383e-08	7.47455556426385	-0.07816522273663762	
GIITDS(ph)FGR	ddPTM_K562_Methotrexat_30min_R1	4	GIITDSFGR	9	0	C9JUH3;A0A0A0MT72;Q9BSQ5-3;Q9BSQ5-4;Q9BSQ5;Q9BSQ5-2	C9JUH3	CCM2	Cerebral cavernous malformations 2 protein	1	GIIT(0.001)DS(0.999)FGR;GIIT(0.109)DS(0.891)FGR;GIIT(0.051)DS(0.949)FGR;GIIT(0.009)DS(0.991)FGR	112.85	0.0038504	207963000.0	9969.2	8836.2	9013.5	10068.5	9853.1	9471.9	9823.4	10402.599999999999	10111.0	10574.5	True	False	9530.965904783034	10296.231860280699	7121.689526765538	9185.810237354717	11148.955354438323	11302.210621312199	12026.547511090994	10036.734661750184	9640.941816912888	8659.355580999953	1.1006553334864244	1.1890298029650523	0.8224271956670418	1.0607960547907158	1.287504046940971	1.305202276958242	1.3888501746572475	1.1590625385302837	1.1133555755657727	1.0	13.080043949950305	-7.694187231971996	6.782857052835564	1.2304998827477085	1.035800033731094	0.2605966986312671	0.13394753925204275	0.27140849930871563	21.877514247261573	0.040832311251804795	0.052590490701132024	2.0221472075856374e-08	7.694187231971996	-0.19469984901661452	
GILHLSPDVYQEMEAS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	GILHLSPDVYQEMEASR	17	0	H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3;E5RJ67;E5RJN7	H0YBY0	STAU2	Double-stranded RNA-binding protein Staufen homolog 2	1	GILHLS(0.023)PDVY(0.204)QEMEAS(0.773)R	71.03	0.032208999999999995	25039000.0	774.75	848.61	929.07	1212.4	832.95	1079.1	816.08	1287.3	1016.4	900.68	True	False	740.6929176594566	988.8283785963198	734.0709034927677	1106.110774372434	942.4975248885532	1287.620802738415	999.1067138517346	1242.0249293514141	969.1477858481121	737.5581242323555	1.0042502323872629	1.3406785799091894	0.995271937729359	1.4996930249038545	1.2778620340864622	1.7457889221660468	1.3546142073773464	1.6839688812920388	1.3139951334097137	1.0	9.526612937085739	-7.271455517793859	24.940873366769132	1.4454167024711577	1.136128080285894	0.2676944794678131	0.21934835731629454	767.9128255048496	1912154.0342543228	0.05737650549309637	0.08624319263848125	5.352349719053171e-08	7.271455517793859	-0.30928862218526376	
GILRT(ph)PDTIRR	ddPTM_K562_Methotrexat_30min_R1	1	GILRTPDTIRR	11	2	A0A087WVQ6;Q00610-2;Q00610	A0A087WVQ6	CLTC	Clathrin heavy chain;Clathrin heavy chain 1	1	GILRT(0.771)PDT(0.229)IRR	77.204	0.031576	240990000.0	2444.1	2405.0	2788.7	2559.8	2265.0	2109.9	2177.4	2354.6	2314.9	2883.8	True	False	2336.660290482706	2802.3853719896633	2203.389979840358	2335.3863083458887	2562.887200759438	2517.608314055955	2665.7373771453376	2271.7873834000156	2207.2808042697716	2361.515875406654	0.9894747330802222	1.1866891945018543	0.9330405113033312	0.988935256657436	1.0852720608190314	1.0660984074995565	1.1288246693180908	0.9620038582246724	0.9346881074384804	1.0	11.205497518771555	-9.322448807706571	16.548063419509884	0.961248225374423	1.0536547408284829	0.24843792463007452	0.0704033882857451	10.594555765850803	2871.6618100178216	0.03849214868449382	0.018490222276289922	4.759388887942197e-10	9.322448807706571	0.09240651545405987	
GILSLPHQAS(ph)PVSR	ddPTM_K562_Methotrexat_30min_R1	2	GILSLPHQASPVSR	14	0	O75925;O75925-2	O75925	PIAS1	E3 SUMO-protein ligase PIAS1	1	GILSLPHQAS(0.927)PVS(0.073)R;GILSLPHQAS(0.996)PVS(0.004)R	150.9	2.3761999999999997e-09	264700000.0	6846.7	7197.2	7617.6	7182.1	7679.0	7070.9	7291.6	8288.2	7265.900000000001	7955.599999999999	True	False	6545.7272660070985	8386.414968517263	6018.769860663362	6552.456443929607	8688.923096967646	8437.251352129604	8926.926912461167	7996.699308203515	6928.109894917158	6514.763748659816	1.0047528227487377	1.287293797912852	0.9238661742571268	1.0057857347900827	1.3337280417505681	1.2950970561081778	1.3702610343003718	1.2274734152636855	1.0634476033520592	1.0	12.669497146522742	-7.75363554123059	24.999882730037868	1.2381426515581353	1.0625896709959102	0.22969839967311945	0.1390998747824117	247.85288265699836	794001.7881425212	0.041648478115783545	0.052757229654939744	1.763455312615649e-08	7.75363554123059	-0.17555298056222512	
GIMGEDT(ph)YPY(ph)QGK	ddPTM_K562_Methotrexat_30min_R1	1	GIMGEDTYPYQGK	13	0	E9PKT6;A0A087X0D5;P09668	E9PKT6	CTSH	Pro-cathepsin H;Cathepsin H mini chain;Cathepsin H;Cathepsin H heavy chain;Cathepsin H light chain	2	GIMGEDT(1)Y(0.051)PY(0.949)QGK	98.368	0.015411000000000001	45209000.0	2978.6	2238.3	4740.8	3483.6	2386.0	2195.0	1817.4	2892.2	2788.5	3838.4	True	False	2847.664310474938	2608.141030405184	3745.7708668652667	3178.198196637917	2699.8008216388585	2619.1526846546376	2224.9982131091856	2790.4796866854344	2658.8632436417356	3143.2285651435286	0.9059679407516792	0.8297649936526614	1.1916953505715624	1.0111253861339198	0.8589260264359992	0.8332682878042754	0.7078703209124043	0.8877749832227085	0.8459019726172298	1.0	11.618031468605828	-7.813299549153292	6.015201724646447	0.8402747232894279	0.988303657054314	0.24449601630462503	0.10926021052556076	0.2638900882659844	20.79280236941242	0.035187719930457405	0.040566726968715244	1.537094083292548e-08	7.813299549153292	0.14802893376488613	
GIPHLVTHDAR	ddPTM_K562_Methotrexat_30min_R1	4	GIPHLVTHDAR	11	0	C9JEH7;P62701;P22090;Q8TD47	C9JEH7	RPS4Y1;RPS4X;RPS4Y2	40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1;40S ribosomal protein S4, Y isoform 2	0	;;;	178.84	4.9179000000000006e-08	150774700.0	14740.6	13857.2	15008.900000000001	15579.100000000002	14711.900000000001	14014.6	14109.8	15793.699999999999	15480.5	16461.4	False	True	14092.62087389607	16146.86676787326	11858.736998754237	14213.304491113164	16646.772719140285	16722.723104492434	17274.281824214806	15238.226619045625	14760.814933905649	13480.08094577263	1.0454403746229384	1.1978315881654211	0.879722981372241	1.0543931114575742	1.2349163766973323	1.240550644448222	1.2814672177196416	1.1304254537005842	1.0950093692526868	1.0	13.718541539252762	-7.7016142182880944	8.307651983646954	1.1798650644091813	1.0428495203726864	0.22932742151848373	0.10477167262880491	0.3713783856039415	46.19274028229932	0.031374491755256195	0.04043442335138777	1.9878599397913417e-08	7.7016142182880944	-0.13701554403649485	
GIPLATGDTS(ph)PEPELLPGAPLPPPK	ddPTM_K562_Methotrexat_30min_R1	1	GIPLATGDTSPEPELLPGAPLPPPK	25	0	K7EL60;K7ER90;K7EL20;K7ENA8;O75821	K7EL60	EIF3G	Eukaryotic translation initiation factor 3 subunit G	1	GIPLAT(0.006)GDT(0.13)S(0.864)PEPELLPGAPLPPPK	89.565	7.5856e-05	8203200.0	3648.3	3021.6	4214.1	3465.7	2563.4	2577.4	2509.7	3815.1	3538.0	3706.8	True	False	3487.925100351074	3520.868041581694	3329.617999083891	3161.8674618463756	2900.532031093484	3075.44607263274	3072.564111059822	3680.920770580733	3373.519152233981	3035.4626003736	1.1490588287669188	1.1599115209485207	1.096906283303931	1.0416427010028777	0.9555485976788155	1.0131721182314086	1.012222687468347	1.2126391444018092	1.1113690387154742	1.0	11.567700682661187	-6.958559956046692	3.2073562497902772	1.0518313074255239	1.1544533001114932	0.28163239617983304	0.06685097077445674	0.3625672783003191	7.654350212971031	0.02060056244949171	0.04697732155355296	1.1001199589616417e-07	6.958559956046692	0.10262199268596928	
GIPNMLLSEEETES(ph)	ddPTM_K562_Methotrexat_30min_R1	4	GIPNMLLSEEETES	14	0	F5GYQ2;Q9UI30-2;Q9UI30	F5GYQ2	TRMT112	Multifunctional methyltransferase subunit TRM112-like protein	1	GIPNMLLSEEET(0.007)ES(0.993);GIPNMLLSEEET(0.031)ES(0.969);GIPNMLLSEEET(0.031)ES(0.969);GIPNMLLSEEET(0.063)ES(0.937)	149.57	7.5263e-09	20341900.0	4960.21	4907.83	5152.7	5130.349999999999	4540.0599999999995	4701.02	4821.73	5668.83	5226.56	5009.98	True	False	4742.1651075877535	5718.765488653654	4071.218685811815	4680.58018088223	5137.15746784984	5609.425582512599	5903.125692800124	5469.454035776571	4983.578366393457	4102.624074301211	1.155885848106976	1.393928711254812	0.9923450484566404	1.140874741656524	1.252163828518663	1.367277498723311	1.4388658541193753	1.333159932940765	1.2147294697582782	1.0	12.00233125000919	-7.955556088533976	5.3090060692173004	1.3030916313639356	1.1750982752998047	0.07820840498135695	0.14353847325616462	0.38334478662390575	25.26598491607911	0.04513193256169046	0.05076950585746305	1.107755491040135e-08	7.955556088533976	-0.12799335606413087	
GIRDDIEEEDDQEAYFR	ddPTM_K562_Methotrexat_30min_R1	1	GIRDDIEEEDDQEAYFR	17	1	A0A0A0MSJ0;Q86XP3-2;Q86XP3;J3KRE3	A0A0A0MSJ0	DDX42	ATP-dependent RNA helicase DDX42	0		110.6	0.00086966	0.0	1087.2	765.2	1120.5	1162.0	798.35	970.86	723.85	999.63	1038.0	1205.2	False	True	1039.4079897765228	891.636293823905	885.3223625385024	1060.1292641213863	903.3470184222066	1158.4649546349892	886.1917885765836	964.4724463043221	989.7436065627123	986.9266013732228	1.0531765871243888	0.903447422111503	0.8970498528529407	1.0741723474129772	0.9153132737179012	1.1738106491638647	0.89793079580946	0.9772484042504705	1.0028543208639527	1.0	9.946798983906856	-7.247937502713902	24.8840156527397	1.0036788572780149	0.9464469090012966	0.08182379814648588	0.08324561521844676	1919.4399392351577	3537530.6131429006	0.021833955424043726	0.03759008064354033	5.650182780979071e-08	7.247937502713902	-0.05723194827671829	
GIS(ph)PIVFDR	ddPTM_K562_Methotrexat_30min_R1	4	GISPIVFDR	9	0	J3QR07;Q96MU7-2;Q96MU7	J3QR07	YTHDC1	YTH domain-containing protein 1	1	GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR	140.07	7.032e-05	622762000.0	17949.699999999997	16190.2	20670.9	18707.5	16906.4	16250.4	16876.1	19393.1	17988.4	17789.5	True	False	17160.65268036392	18865.35536365366	16332.36057456236	17067.442520267494	19129.88793418073	19390.55981171378	20660.99501719595	18711.03368088628	17152.123210301248	14567.649166220495	1.1779973889099478	1.2950171402671269	1.1211390656245266	1.1715989536488514	1.313176046176288	1.3310699338282161	1.418279283187621	1.2844236889143017	1.1774118812576595	1.0	13.830480462863123	-6.230612253335804	21.4598849949311	1.2492510804688204	1.1779966275127611	0.007351308898153275	0.11507059582106378	7247.0702502377935	5044381.160617595	0.028994370697906023	2.4367627467187205	5.880141088122094e-07	6.230612253335804	-0.07125445295605926	
GIS(ph)PVVSEHR	ddPTM_K562_Methotrexat_30min_R1	1	GISPVVSEHR	10	0	H0YH87;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHH4;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A2R8Y5A6;A0A5F9ZHX3;A0A5F9ZHW5;Q99700-2;Q99700-5;Q99700-4;Q99700;F8W0B5;F8WB06	H0YH87;F8WB06	ATXN2	Ataxin-2	1	GIS(1)PVVSEHR	74.987	0.030237	7260900.0	6153.9	5302.9	8151.8	5761.5	5364.1	4848.1	4492.2	6664.8	5597.6	7421.1	True	False	5883.381924471801	6179.114091111847	6440.8485809383	5256.398240305825	6069.573171564548	5784.92671092217	5499.690201897808	6430.3952063554025	5337.368797779802	6077.066878070714	0.9681285466352475	1.0167921819997365	1.0598613953353555	0.8649564577401152	0.9987668876027666	0.9519274391725487	0.904990896470732	1.058141260475458	0.8782804114004182	1.0	12.569159453479411	-7.230475896033006	24.99908136421242	0.9535423196171571	1.0151138426889956	0.19501653822509823	0.05935399121819244	1135.344786042921	916646.375577869	0.015208782194895593	0.02633865650868765	5.88198759112353e-08	7.230475896033006	0.06157152307183855	
GIS(ph)PVVSEHRK	ddPTM_K562_Methotrexat_30min_R1	2	GISPVVSEHRK	11	1	H0YH87;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHH4;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A2R8Y5A6;A0A5F9ZHX3;A0A5F9ZHW5;Q99700-2;Q99700-5;Q99700-4;Q99700;F8W0B5;F8WB06	H0YH87;F8WB06	ATXN2	Ataxin-2	1	GIS(1)PVVSEHRK;GIS(1)PVVSEHRK	95.273	0.0077691	76017000.0	8244.7	6855.700000000001	10633.7	8685.3	6630.0	6360.3	5703.7	7712.799999999999	7793.0	8696.5	True	False	7882.2728599250395	7988.487898024761	8401.831688108587	7923.873233798174	7501.961210170005	7589.337959092896	6982.899916425032	7441.53645234334	7430.705130966484	7121.479579192031	1.1068307887810196	1.1217455318366716	1.1797873734915376	1.1126723240140468	1.0534273287941016	1.0656967944228726	0.9805406079978225	1.044942468709237	1.0434215317667928	1.0	12.797961295489177	-7.860866729712107	1.893216300322438	1.026101846421916	1.1366234214232391	0.7548152316667202	0.028198355874312055	0.16858317879229395	1.241333210572408	0.010296864069436302	0.01252479171825942	1.3776321527506758e-08	7.860866729712107	0.11052157500132309	
GISEDSHLESLQDVGQSAAPTFMIS(ph)PETVTGTGKK	ddPTM_K562_Methotrexat_30min_R1	1	GISEDSHLESLQDVGQSAAPTFMISPETVTGTGKK	35	1	E7EVA0;P27816;P27816-6	E7EVA0	MAP4	Microtubule-associated protein;Microtubule-associated protein 4	1	GISEDSHLESLQDVGQS(0.012)AAPT(0.072)FMIS(0.898)PET(0.016)VT(0.002)GT(0.001)GKK	110.25	3.1332e-18	41794000.0	2748.8	1947.0	4231.9	3240.0	1884.7	2066.7	1824.4	2370.1	2634.2	3602.1	True	False	2627.9660433201857	2268.708656658577	3343.6820223352847	2955.95423042452	2132.571084887996	2466.060525455919	2233.568141298776	2286.742239614532	2511.736616962904	2949.724784937343	0.8909190636156274	0.7691255361326085	1.133557286228759	1.0021118734598522	0.7229729009899124	0.8360307165091344	0.7572123856111616	0.7752391854628927	0.8515155819922561	1.0	11.52636463916086	-7.752775934072172	24.999984707872144	0.8098697260594823	0.9492731553388731	0.22873701005504743	0.11077111625038084	267.98930430733503	773329.0928155526	0.033396355920001994	0.042432166791410764	1.7669492091935943e-08	7.752775934072172	0.13940342927939087	
GISHVIVDEIHER	ddPTM_K562_Methotrexat_30min_R1	4	GISHVIVDEIHER	13	0	Q08211	Q08211	DHX9	ATP-dependent RNA helicase A	0	;;;	205.02	6.7861e-12	83283300.0	13665.900000000001	12518.300000000001	12784.1	12052.1	13449.999999999998	12595.7	12678.5	14883.4	14561.3	13521.1	False	True	13065.163399086627	14586.736300282004	10100.892115063329	10995.511105092392	15218.910750646544	15029.640760867625	15521.976364534385	14359.942386008566	13884.348341273231	11072.297767862174	1.1799866362887053	1.3174082386603294	0.9122670223322216	0.9930649749149035	1.374503384005811	1.3574093721080924	1.401874903471942	1.296925235129507	1.2539717258664373	1.0	13.434667026628919	-7.768498497517743	24.999987116026617	1.3055131768948582	1.102703985959429	0.25810277796330405	0.14600156613175216	208.37336183897463	737956.3946176459	0.04585039487067518	0.0530852102423851	1.704125214885427e-08	7.768498497517743	-0.20280919093542926	
GISS(ph)HS(ph)RS(ph)SLMPLR	ddPTM_K562_Methotrexat_30min_R1	1	GISSHSRSSLMPLR	14	1	Q8TD20	Q8TD20	SLC2A12	Solute carrier family 2, facilitated glucose transporter member 12	3	GIS(0.228)S(0.858)HS(0.9)RS(0.992)S(0.021)LMPLR	67.704	0.025913	9352900.0	4575.7	4522.2	5659.2	5440.4	4332.2	4192.2	3845.5	4981.1	5478.9	5892.9	True	False	4374.557706788481	5269.416685742893	4471.411257543857	4963.448578765913	4901.960234494495	5002.283318728557	4707.951264725084	4805.911889685644	5224.187134871329	4825.638706631486	0.906524083698367	1.091962537208092	0.9265947016296843	1.0285578512011366	1.0158158396230796	1.036605436676045	0.9756120486714694	0.9959120816652245	1.0825897777411622	1.0	12.23650419033947	-6.226715262176234	23.19798176454439	1.0137515193210214	0.9065234943181077	0.33998120722699654	0.045999719274500625	7582.591129329245	5065436.535973959	0.010736413979139211	1.799699840521652	5.933141934936249e-07	6.226715262176234	-0.10722802500291362	
GIVVY(ph)TGDR	ddPTM_K562_Methotrexat_30min_R1	2	GIVVYTGDR	9	0	P05023-2;P05023-3;P05023-4;P05023	P05023-2	ATP1A1	Sodium/potassium-transporting ATPase subunit alpha-1	1	GIVVY(0.978)T(0.022)GDR;GIVVY(0.99)T(0.01)GDR	187.0	3.4913000000000006e-07	67044000.0	1861.18	2416.7	3090.1	2312.2	2525.7	2560.5	2111.58	1977.67	1880.18	1958.13	True	False	1779.364755714007	2816.0185981236673	2441.53023871506	2109.493015922091	2857.8738202905565	3055.28038681467	2585.155566654062	1908.1142251459735	1792.7708421840837	1603.4936823323505	1.1096799290944785	1.7561769211511	1.5226316546278806	1.3155605408146933	1.7822794388149108	1.9053897252470824	1.6122019033426076	1.1899730233863717	1.1180404774507258	1.0	10.647002954322069	-9.352623246979062	3.7526942600570843	1.0855602559186732	1.588657021497327	0.49150429747363866	0.22022609559570538	0.21473728149419488	5.582524906156706	0.13849489478715438	0.06119386494782262	4.439936440135622e-10	9.352623246979062	0.5030967655786538	
GIVVYT(ph)GDR	ddPTM_K562_Methotrexat_30min_R1	1	GIVVYTGDR	9	0	P05023-2;P05023-3;P05023-4;P05023	P05023-2	ATP1A1	Sodium/potassium-transporting ATPase subunit alpha-1	1	GIVVY(0.337)T(0.663)GDR	136.8	0.00031058	21862000.0	1349.8	1588.6	2185.7	1725.0	1590.5	1803.8	1591.9	1223.0	1417.3	1367.9	True	False	1290.4644082048844	1851.089148416957	1726.9514393577897	1573.771928235276	1799.6786281712518	2152.3588212209743	1948.92409785876	1179.9863967970014	1351.4100323519576	1120.1600547779883	1.1520357315907412	1.6525220128331002	1.5417006096508818	1.404952731105192	1.6066263213857788	1.9214743572047515	1.7398621648269985	1.053408744369902	1.206443692209505	1.0	10.12948917206712	-9.269615849887067	24.849770932679046	1.0974446128162343	1.5840306863800622	0.562690301754321	0.19676106252302786	456.15545056498735	1386328.9441507536	0.11041444105806654	0.054471430708152004	5.375070317260428e-10	9.269615849887067	0.4865860735638279	
GIWHNDNK	ddPTM_K562_Methotrexat_30min_R1	1	GIWHNDNK	8	0	P12277;H0YJG0;P06732	P12277	CKB;CKM	Creatine kinase B-type;Creatine kinase M-type;Creatine kinase M-type, N-terminally processed	0		107.29	0.018032	7400400.0	4511.7	3210.6	5321.2	4070.4	3627.6	3705.8	3320.3	3884.6	3731.1	5105.6	False	True	4313.3710701570435	3741.097079130983	4204.35283850056	3713.554351703692	4104.692984315647	4421.893402639251	4064.9617954145615	3747.97641618776	3557.641975381632	4180.926365724467	1.0316783154849047	0.8948009966883808	1.00560317755609	0.8882132874062734	0.9817663898523095	1.0576348435337797	0.9722634267705378	0.896446406450479	0.8509219403018994	1.0	12.029606919591705	-9.255546603498424	22.80294705359518	0.9052631239142955	0.973996162988675	0.16378836895642268	0.06084520764159452	221.25187640323978	856178.0587876498	0.029141109478815812	0.016195949604405988	5.552050356917295e-10	9.255546603498424	0.06873303907437944	
GIYAYGFEKPSAIQQR	ddPTM_K562_Methotrexat_30min_R1	2	GIYAYGFEKPSAIQQR	16	1	P60842;P60842-2;J3KT12;J3QLN6;E7EQG2;J3QS69;J3QL43;J3KTB5;J3KS93;J3QR64;J3QKZ9;J3KS25;J3KSN7;E7EMV8;F8WE11;E9PBH4;J3QQP0;J3KT04;Q14240;Q14240-2;I3L3H2;P38919	P60842;I3L3H2	EIF4A1;EIF4A2;EIF4A3	Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed	0	;	187.74	5.4061000000000003e-08	27180000.0	2255.82	1157.15	2464.0	1894.69	1564.75	1455.4499999999998	1578.98	1816.0700000000002	2306.77	2615.3	False	True	2156.656853842602	1348.349369313032	1946.840072552316	1728.5854693959982	1770.5420518270778	1736.6951138408174	1933.1064589716857	1752.197788741725	2199.5287661952475	2141.64382722485	1.00701004827549	0.6295861861681398	0.909040078375235	0.8071302274551906	0.8267210585251016	0.8109168722472556	0.9026274277719709	0.8181555525095082	1.0270282753063589	1.0	11.064502852788236	-9.761887710727093	24.999998766631997	1.013514223467423	0.8339861298404062	0.3665232983841311	0.0916424738508772	11.344639660317112	632269.4628991648	0.06668597412227951	0.021246618126034917	1.7302636707569137e-10	9.761887710727093	-0.17952809362701683	
GIYLWDVEGR	ddPTM_K562_Methotrexat_30min_R1	2	GIYLWDVEGR	10	0	P04181	P04181	OAT	Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form	0	;	118.26	0.033014999999999996	20943500.0	4079.7000000000003	3639.6	4090.6	4236.4	3933.3999999999996	4030.3	4178.7	4729.3	4431.7	4855.9	False	True	3900.361272894848	4240.982037377791	3232.0389613565326	3865.00138943532	4450.711044356368	4809.098435063142	5115.879846549658	4562.967838407242	4225.671234300549	3976.4494553669365	0.9808652962080546	1.0665248194350416	0.8127951826457426	0.9719729705651867	1.1192676014904024	1.2093950870096928	1.286544668547177	1.1474980103792576	1.0626744490860416	1.0	11.957265117614089	-7.7980577611530615	4.001633255880362	1.1594550293178696	0.953385342537062	0.46626127154049213	0.0933449407464179	0.18242561566712107	6.238246357853221	0.030151252613068977	0.036069870932248026	1.5919969774199082e-08	7.7980577611530615	-0.20606968678080761	
GIYSNMLGFLGGVS(ph)WAMLVAR	ddPTM_K562_Methotrexat_30min_R1	1	GIYSNMLGFLGGVSWAMLVAR	21	0	Q9BWT3-2;Q9BWT3;F8WAT4	Q9BWT3-2	PAPOLG	Poly(A) polymerase gamma	1	GIYSNMLGFLGGVS(1)WAMLVAR	47.732	0.025730000000000003	77654000.0	245.36	320.9	459.24	247.22	299.63	255.22	272.99	372.51	323.46	287.29	True	False	234.57426818576866	373.9232706326334	362.85179988592745	225.54660643381163	339.0365968933995	304.5376529282717	334.21495663952714	359.40861215932193	308.42241520113157	235.25899710298145	0.9970894676690598	1.5894111393705954	1.5423503642969878	0.9587161775372257	1.4411206417962872	1.2944782417607794	1.4206256115817286	1.5277146318956536	1.310990946144873	1.0	7.878106087341287														
GKAS(ph)PFEEDQNR	ddPTM_K562_Methotrexat_30min_R1	3	GKASPFEEDQNR	12	1	C9JW01;A0A0A0MR59;Q8TB72-2;Q8TB72-4;Q8TB72-3;Q8TB72;A0A0C4DG68	C9JW01	PUM2	Pumilio homolog 2	1	GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR	164.92	4.1247e-05	59948000.0	8490.7	6818.700000000001	11628.4	8660.5	7545.799999999999	7274.0	6271.1	8550.1	8948.5	9620.0	True	False	8117.458994477121	7945.374276917229	9187.757751488369	7901.247411293689	8538.204962247488	8679.597552700616	7677.553809964238	8249.388136757185	8532.486188175752	7877.724780294059	1.0304319103382173	1.0085874409819944	1.1662958541622737	1.0029859676055797	1.0838414898176698	1.1017898942614017	0.9745902559542897	1.047179022729105	1.0831155474635978	1.0	12.943563299857159	-12.16862673875824	5.354004224351529	0.9999980416094844	1.0553447669251468	0.08932032485366115	0.053091322566871824	1.2119516986269028e-06	1.8819018165584894e-07	0.05019640299213033	0.01217398530678413	6.782241676438326e-13	12.16862673875824	0.055346725315662426	
GKAS(ph)PFEEDQNRDLK	ddPTM_K562_Methotrexat_30min_R1	1	GKASPFEEDQNRDLK	15	2	C9JW01;A0A0A0MR59;Q8TB72-2;Q8TB72-4;Q8TB72-3;Q8TB72;A0A0C4DG68	C9JW01	PUM2	Pumilio homolog 2	1	GKAS(1)PFEEDQNRDLK	74.14699999999999	0.018012	0.0	1402.6	1112.0	1936.0	1460.6	1064.5	900.29	785.54	1262.8	1295.3	1934.8	True	False	1340.94338342582	1295.739099231811	1529.6600570053906	1332.5514657277945	1204.5004084805396	1074.2583008964573	961.7173414360008	1218.3866082381458	1235.0817857231987	1584.3889714046734	0.8463473349205267	0.8178162828809937	0.9654574000532447	0.8410507077352305	0.760230240313188	0.6780268736306911	0.606995730715905	0.7689946283569239	0.7795319255651034	1.0	10.629710848758256	-7.727404715834409	3.751942727903102	0.7404468886659566	0.8746914998519608	0.17576745530083238	0.10198985817647743	0.3066114738532312	9.097314652777504	0.031123977561781337	0.03928074109864061	1.873248028363983e-08	7.727404715834409	0.13424461118600417	
GKEGTHATCASEEGGTESSESGSSLQPLSADSTPDVNQS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	GKEGTHATCASEEGGTESSESGSSLQPLSADSTPDVNQSPR	41	1	A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6	A0A0A0MRB5	MADD	MAP kinase-activating death domain protein	1	GKEGTHATCASEEGGTESSESGSSLQPLS(0.007)ADS(0.115)T(0.035)PDVNQS(0.842)PR	90.931	5.3271999999999995e-15	17910000.0	316.09	282.27	717.28	577.24	246.19	474.8	405.19	578.38	397.25	590.95	True	False	302.19506207547914	328.91031973036274	566.7327302111709	526.6342654229162	278.56830020086795	566.5483802615137	496.0641718772482	558.0380475710955	378.78193420716514	483.92322857741965	0.6244690153928681	0.679674585361927	1.1711211546450968	1.088259943568019	0.5756456473886781	1.1707402058937855	1.0250885731100758	1.1531540844020856	0.7827314578815808	1.0	8.918634380795897	-6.667787511240657	7.2469170416731465	0.9964350272383281	0.6416923140174398	0.3734658713519037	0.17841496593803488	0.2257275555136807	14.85552321404611	0.045228537331015055	0.12098872875081929	2.1488816076808673e-07	6.667787511240657	-0.35474271322088835	
GKELSDQATAS(ph)PIVAR	ddPTM_K562_Methotrexat_30min_R1	3	GKELSDQATASPIVAR	16	1	Q5JSH3-4;Q5JSH3-2;Q5JSH3	Q5JSH3-4	WDR44	WD repeat-containing protein 44	1	GKELSDQAT(0.212)AS(0.788)PIVAR;GKELSDQAT(0.001)AS(0.999)PIVAR;GKELSDQAT(0.016)AS(0.984)PIVAR	114.06	0.0007789	77866000.0	6688.37	5846.18	7956.3	7076.1	6056.24	5251.860000000001	5400.92	6272.93	6669.82	8064.500000000001	True	False	6394.357263228109	6812.161876930789	6286.381359272723	6455.7492993539945	6852.7417133454	6266.707616596956	6612.213793961519	6052.307496369426	6359.74152401166	6603.940903397247	0.9682638528668053	1.0315298056992648	0.9519136302444555	0.9775601256566335	1.0376745966669936	0.9489345389770509	1.0012527202598096	0.916469057628295	0.963022173735691	1.0	12.689111494744088														
GKLS(ph)AEENPDDSEVPSSSGINSTK	ddPTM_K562_Methotrexat_30min_R1	3	GKLSAEENPDDSEVPSSSGINSTK	24	1	A0A494C1S7;Q9Y5Q9-2;Q9Y5Q9	A0A494C1S7	GTF3C3	General transcription factor 3C polypeptide 3	1	GKLS(0.789)AEENPDDS(0.209)EVPS(0.001)S(0.001)SGINSTK;GKLS(1)AEENPDDSEVPSSSGINSTK;GKLS(0.972)AEENPDDS(0.028)EVPSSSGINSTK	99.25399999999999	1.9479e-06	115003000.0	8823.3	6076.0	13925.1	9664.0	6658.700000000001	5788.9	4691.1	7837.9	7933.6	11062.9	True	False	8435.43829672111	7079.955725658716	11002.411807750916	8816.772124327945	7534.435763221572	6907.5229959896305	5743.198590027787	7562.236614435992	7564.768667655036	9059.30160830719	0.9311356064120868	0.7815123098635489	1.2144878582761758	0.973228677610551	0.8316795365674382	0.7624785325234757	0.6339559977516803	0.8347482997476956	0.8350277973655608	1.0	13.145184120246178	-7.819347228089836	4.282799493331027	0.792864793523711	0.9791177554930703	0.2564689663810089	0.13021381961705494	0.273586775611305	10.156574838268076	0.041834623410692016	0.04916942801827144	1.515837936723589e-08	7.819347228089836	0.18625296196935937	
GKS(ph)T(ph)TLTQDMST(ph)S(ph)LQEGQEDGPAGWR	ddPTM_K562_Methotrexat_30min_R1	1	GKSTTLTQDMSTSLQEGQEDGPAGWR	26	1	Q8IY33-2;Q8IY33;Q8IY33-5	Q8IY33-2	MICALL2	MICAL-like protein 2	4	GKS(0.574)T(0.574)T(0.574)LT(0.58)QDMS(0.363)T(0.667)S(0.667)LQEGQEDGPAGWR	42.38399999999999	0.030706999999999998	0.0	71.182	0.0	125.12	190.27	0.0	197.44	61.106	129.36	0.0	173.44	True	False	68.0529245109202	0.0	98.85902186596823	173.58932451323244	0.0	235.59248567572297	74.81057599331454	124.81033547805404	0.0	142.0283353320377	0.47915033540190577	0.0	0.6960514015379602	1.2222161451615314	0.0	1.6587710130161595	0.5267299360963454	0.8787706705585829	0.0	1.0	7.1500349727789025	-6.858158755911974	7.107062503748168	0.7619560346940178	0.24323469667717665	0.1463002973003703	0.4918503412116848	0.36596054287729024	22.858399690426605	0.12216332287701065	0.2580654081858472	1.3862489943125562e-07	6.858158755911974	-0.5187213380168412	
GLAGPPAS(ph)PGK	ddPTM_K562_Methotrexat_30min_R1	2	GLAGPPASPGK	11	0	Q9P206;Q9P206-3;Q9P206-2	Q9P206	KIAA1522	Uncharacterized protein KIAA1522	1	GLAGPPAS(1)PGK;GLAGPPAS(1)PGK	96.745	0.010034	26878000.0	7738.4	5900.1	10391.7	6594.0	6665.200000000001	5607.200000000001	5338.0	6837.8	7947.3	7839.1	True	False	7398.229201698532	6874.991240447494	8210.62418098291	6015.9142578454575	7541.790627153109	6690.712042549199	6535.182382291644	6597.3106982980635	7577.831757645313	6419.363027567896	1.1524864959228671	1.0709771687506855	1.279040326232129	0.9371512768494582	1.1748503075406327	1.0422703956476675	1.0180421880218276	1.0277204560586422	1.1804647478421744	1.0	12.648214435193463	-7.261378793203438	24.99999922895489	1.0585158978380707	1.1578489055048464	0.26980685525671155	0.08465927223612126	8.129436884198057	3353565.8928347626	0.022450173185907397	0.03589038105835735	5.477989642745058e-08	7.261378793203438	0.09933300766677577	
GLDEDRGSWR	ddPTM_K562_Methotrexat_30min_R1	1	GLDEDRGSWR	10	1	Q14152-2;Q14152	Q14152-2	EIF3A	Eukaryotic translation initiation factor 3 subunit A	0		102.06	0.017029	37154000.0	4289.7	3693.7	3991.1	4600.9	3451.2	3916.9	4229.8	4216.0	4364.6	4414.6	False	True	4101.12992434175	4304.02114283502	3153.4226516085805	4197.546240358076	3905.093292388948	4673.785489988044	5178.44032233368	4067.7208903484498	4161.690698654735	3615.073161651369	1.1344528149102104	1.190576497452942	0.8722984323139104	1.1611234552278418	1.0802252451801273	1.2928605538519873	1.4324579588779784	1.1252112221403316	1.1512051105360397	1.0	11.81980912931664	-8.242591548423956	23.67938636111359	1.2226796044920951	1.0855570701787467	0.14102856996198299	0.1333285615633814	707.9814798574985	889468.9221738313	0.04461743826215153	0.044530629094233165	5.720163620165897e-09	8.242591548423956	-0.13712253431334842	
GLEKES(ph)HNSR	ddPTM_K562_Methotrexat_30min_R1	2	GLEKESHNSR	10	1	P23229-9	P23229-9			1	GLEKES(0.949)HNS(0.051)R;GLEKES(0.996)HNS(0.004)R	74.92	0.030019	68843000.0	2922.3999999999996	2962.6	4328.700000000001	3590.3999999999996	3334.8999999999996	2854.6	3120.2	2822.0	3027.4	3545.5	True	False	2793.934795182956	3452.119294410222	3420.1650251855544	3275.6352064556136	3773.4978038907916	3406.211049482976	3819.9842767378022	2722.748660475174	2886.656834786083	2903.3755934025585	0.9623056698319402	1.1890019680039308	1.1779960653238646	1.1282161405155273	1.29969329922916	1.173189943878783	1.3157044804737237	0.9377872661953109	0.9942416135706086	1.0	11.503515502058498	-9.279388704022608	24.95638139481871	0.9745108037459203	1.1810161614195325	0.4973786629327306	0.09239540695649057	687.6045406016539	956025.8641735027	0.05000534946983483	0.024095731065608667	5.255466788915473e-10	9.279388704022608	0.20650535767361222	
GLEPS(ph)PAAVAALPPEVR	ddPTM_K562_Methotrexat_30min_R1	2	GLEPSPAAVAALPPEVR	17	0	Q9P265	Q9P265	DIP2B	Disco-interacting protein 2 homolog B	1	GLEPS(1)PAAVAALPPEVR;GLEPS(1)PAAVAALPPEVR	186.96	1.2403e-10	17189500.0	3693.9	3134.3	3208.2999999999997	3572.9	3133.7	2680.6000000000004	2848.8	3534.7	3251.9	3831.6	True	False	3531.5205789509723	3652.1898010092327	2534.9216740136335	3259.6694042851113	3545.836477271456	3198.5880120661623	3487.715918072766	3410.382597512966	3100.719878787364	3137.660111036875	1.12552681105537	1.1639851582911973	0.8079019346604562	1.0388854397641931	1.1300894143373912	1.0194182603829427	1.1115658785999643	1.0869190660635217	0.9882268215988175	1.0	11.615473364603643	-4.4882637436314035	18.917867927598294	1.0493422640263546	1.126156651786678	0.0	0.09809126112509163	0.0	0.0	0.022710695072815555	0.0	3.2488993435492924e-05	4.4882637436314035	0.07681438776032334	
GLESTEAEMHIPS(ph)ALEPSTSSSPR	ddPTM_K562_Methotrexat_30min_R1	1	GLESTEAEMHIPSALEPSTSSSPR	24	0	F5GYM4;Q9UQQ2	F5GYM4	SH2B3	SH2B adapter protein 3	1	GLESTEAEMHIPS(0.463)ALEPS(0.204)T(0.083)S(0.083)S(0.083)S(0.083)PR	75.611	0.010917	26620000.0	736.34	713.54	853.39	534.37	874.83	845.63	809.33	881.29	813.12	1002.1	True	False	703.9713752686208	831.440356893765	674.2751012643754	487.5226117629475	989.8854789582249	1009.0360294872447	990.8428545260577	850.2945311800731	775.3182286784901	820.6099794524617	0.8578635318794611	1.0131979597037435	0.8216754830525875	0.594097834501402	1.2062800888903513	1.2296170589596134	1.2074467522161758	1.036173763993728	0.9448072142576284	1.0	9.680552888751741	-7.7824426950715	24.999998396222544	1.1173106411070743	0.835384025379042	0.5282006601225296	0.1301097707608408	204.49547179532743	243407.28141558464	0.04351607516247936	0.04939241182977628	1.650278740366575e-08	7.7824426950715	-0.28192661572803235	
GLEYLYLNVHDEDRDDQTR	ddPTM_K562_Methotrexat_30min_R1	3	GLEYLYLNVHDEDRDDQTR	19	1	Q9Y6G9;C9JGM7;C9JLW1	Q9Y6G9	DYNC1LI1	Cytoplasmic dynein 1 light intermediate chain 1	0	;;	115.8	0.00087211	42232800.0	10406.5	9436.4	10436.8	10561.8	9940.599999999999	10244.4	10067.3	13560.9	12247.9	12687.4	False	True	9949.042720391268	10995.604708625064	8246.258307310876	9635.863392252375	11247.963138132116	12223.985313292018	12325.148294725488	13083.955460608713	11678.497802330863	10389.588916580338	0.9575973409798707	1.058329140537756	0.7937040024895494	0.927453768346395	1.082618689578943	1.1765610180961288	1.18629797518324	1.2593333158474191	1.1240577366534306	1.0	13.34285095200681	-7.917528960741893	3.2287023163005797	1.166030312581949	0.9328861860500265	0.5763670657200262	0.0864315530651385	0.16948317897840903	3.5504693551432096	0.02856681906602854	0.03258405942274507	1.2091245503009471e-08	7.917528960741893	-0.2331441265319224	
GLEYLYLSVHDEDRDDHTR	ddPTM_K562_Methotrexat_30min_R1	1	GLEYLYLSVHDEDRDDHTR	19	1	O43237	O43237	DYNC1LI2	Cytoplasmic dynein 1 light intermediate chain 2	0		74.141	0.0046998000000000005	4600700.0	2024.0	1400.7	1606.3	1977.6	1613.0	1598.9	1523.0	2100.6	2261.4	2120.9	False	True	1935.0273834691707	1632.141867170862	1269.159581388306	1804.2268784220776	1825.1377725496563	1907.8647961249658	1864.5715189640632	2026.7207073685847	2156.2680075924054	1736.7844580588023	1.1141436546662467	0.9397492357774212	0.7307524981003348	1.0388317733097723	1.0508717786371753	1.0985040701350928	1.0735768104742762	1.1669385328527428	1.2415288480888746	1.0	10.76220300555861	-7.728298758897622	2.3504116560114245	1.1188596346791833	0.9277682187648348	0.3439376892756144	0.10680553008028759	0.3212675731483771	3.636678966148575	0.036302486596379524	0.047285662627089595	1.8693957073839083e-08	7.728298758897622	-0.19109141591434842	
GLFIIDDKGILR	ddPTM_K562_Methotrexat_30min_R1	2	GLFIIDDKGILR	12	1	A0A0A0MSI0;Q06830;A0A0A0MRQ5;H7C3T4;Q13162	A0A0A0MSI0	PRDX1;PRDX4	Peroxiredoxin-1;Peroxiredoxin-4	0	;	147.62	1.9419999999999998e-08	17856900.0	8184.9	5747.7	9231.400000000001	9780.8	5583.4	5539.5	6267.200000000001	7623.9	7447.1	10322.7	False	True	7825.101596322532	6697.409730804574	7293.855294545229	8923.332449671649	6317.7149654394	6609.929975692196	7672.779135687178	7355.763115732342	7100.885946467411	8453.159000991845	0.9257014561543654	0.7922966703949066	0.8628555660303338	1.0556210345297699	0.7473791708754225	0.7819479055009642	0.9076818660085416	0.870179197489277	0.8400274909810915	1.0	13.045274871427303	-12.128631924323575	5.0011782067758626	1.0000059748326102	0.8637950730811961	0.19337351769220545	0.08278033023326795	5.556142510314283e-06	9.679989127773376e-07	0.08075287657584349	0.01958459029891475	7.436491325423958e-13	12.128631924323575	-0.13621090175141415	
GLFQDEDS(ph)CSDCSYR	ddPTM_K562_Methotrexat_30min_R1	3	GLFQDEDSCSDCSYR	15	0	Q8NEM2	Q8NEM2	SHCBP1	SHC SH2 domain-binding protein 1	1	GLFQDEDS(0.927)CS(0.062)DCS(0.011)YR;GLFQDEDS(0.924)CS(0.039)DCS(0.037)YR;GLFQDEDS(0.991)CS(0.009)DCSYR	179.81	3.9573e-05	50059300.0	4822.2	4754.5	4904.7	5470.9	4743.9	4540.62	4613.0	5047.200000000001	4822.799999999999	5785.2	True	False	4610.221861939247	5540.10031231803	3875.270496691289	4991.274691120213	5367.80600074291	5418.030552618017	5647.58267694105	4869.687115219809	4598.589080665364	4737.444220265826	0.9731453601538257	1.1694280828930088	0.8180086807383753	1.0535796220604672	1.1330594622688168	1.143661075615578	1.1921159203905423	1.0279143962029726	0.9706898628998168	1.0	12.2098932414298	-7.5133979418558745	24.470055132174007	1.0887569502671928	0.9935635703845651	0.1323956289129914	0.10165847300046213	672.5310551708039	1735811.5240054189	0.02988258407321691	0.04092811683756532	3.066211146910321e-08	7.5133979418558745	-0.09519337988262766	
GLGACTLLGS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	GLGACTLLGSPR	12	0	K7ER53;O95644-8;O95644-11;O95644-3;O95644-10;O95644-2;O95644-5;O95644-4;O95644-6;O95644	K7ER53	NFATC1	Nuclear factor of activated T-cells, cytoplasmic 1	1	GLGACTLLGS(1)PR	116.74	0.001338	14474000.0	1012.3	1233.5	1335.8	1276.5	1004.5	1031.6	1017.0	1012.7	1269.8	1150.9	True	False	967.8005040937946	1437.3149090849274	1055.4338347870864	1164.5912268941047	1136.6093568047918	1230.9420999953195	1245.0881384021354	977.0827669961764	1210.7672751573523	942.460857550981	1.0268866832397259	1.5250658927309118	1.119870206100304	1.2356918778784485	1.2060016579980974	1.3060936060453137	1.3211032887217644	1.036735647075213	1.2846870673266741	1.0	9.88028889113773	-10.92423692875308	0.5436112692658421	0.9828916623055756	1.2490697349622644	0.18845448346268256	0.14035176928121887	5.807647976213921	2.2099730550701953	0.36236988569229234	0.06115285147849906	1.1905923048382834e-11	10.92423692875308	0.2661780726566888	
GLGHPPSS(ph)PLLK	ddPTM_K562_Methotrexat_30min_R1	2	GLGHPPSSPLLK	12	0	B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785	B9EGQ5	WIZ	Protein Wiz	1	GLGHPPS(0.359)S(0.641)PLLK;GLGHPPS(0.167)S(0.833)PLLK	115.33	0.0013212	43998000.0	6044.299999999999	4804.4	7557.4	6151.8	4266.4	4215.4	3873.2	5715.2	5307.8	7057.200000000001	True	False	5778.599809240464	5598.245439163056	5971.205017981681	5612.481245285665	4827.506381156759	5029.966390384128	4741.863694846753	5514.193176593804	5061.04153652559	5779.072694333813	0.999918172842191	0.9687099877895545	1.0332462202519526	0.9711733252271623	0.8353427334267601	0.8703760371998507	0.820523282134172	0.9541657404656435	0.8757532227424257	1.0	12.496622302195481	-7.6109439359169935	6.107589389389074	0.8860724579487033	0.9981827579298647	0.47671389411833864	0.051954763060109224	0.1673926859835252	9.349931385898223	0.01495800550287201	0.01939642066491935	2.4493794175123157e-08	7.6109439359169935	0.1121102999811614	
GLGLGANLTEAQALT(ph)PTGPSR	ddPTM_K562_Methotrexat_30min_R1	1	GLGLGANLTEAQALTPTGPSR	21	0	Q92917	Q92917	GPKOW	G patch domain and KOW motifs-containing protein	1	GLGLGANLT(0.008)EAQALT(0.965)PT(0.006)GPS(0.02)R	181.49	1.9442000000000002e-17	45138000.0	1379.7	1226.4	1269.5	1670.4	1172.1	1434.9	1546.7	1601.2	1603.0	1730.7	True	False	1319.050040006134	1429.0417547642935	1003.0492987439791	1523.9586254633066	1326.2516944857116	1712.1741171803826	1893.5868472631096	1544.8848884311997	1528.4768798844184	1417.2534591741105	0.9307086403407309	1.0083177045812628	0.7077416479395968	1.0752901082008135	0.9357900563944086	1.2080930944971084	1.3360961195794698	1.090055472033538	1.078478143757802	1.0	10.468882075094603	-8.252943485878143	23.747288021424005	1.1602700062832507	0.9313829684824673	0.4270721280922144	0.12131441661879037	297.3535979516574	831147.5570456355	0.04071046484023508	0.04003076677700799	5.585428723958076e-09	8.252943485878143	-0.22888703780078345	
GLGPNMSS(ph)TPAHEVGRR	ddPTM_K562_Methotrexat_30min_R1	1	GLGPNMSSTPAHEVGRR	17	1	A0A5F9ZH11;P55201-3;P55201;P55201-2	A0A5F9ZH11	BRPF1	Peregrin	1	GLGPNMS(0.02)S(0.567)T(0.413)PAHEVGRR	49.066	0.032977	5591800.0	873.93	699.76	851.44	653.34	700.96	732.63	946.05	859.42	819.47	1057.2	True	False	835.5130836142348	815.383446113716	672.7343796160486	596.0626965757887	793.1485263771899	874.2003787510382	1158.2257948233428	829.1937114761068	781.3730185644945	865.7308355225448	0.9650956733104338	0.94184406129136	0.777071061827195	0.6885081045034191	0.916160651593812	1.009783113735785	1.337859005708456	0.9577962080738587	0.9025588398879971	1.0	9.757774735953962	-8.207255429714966	3.5685957932064656	1.0594178578656506	0.8430332558138267	0.3344076134185593	0.13118035429919558	0.28540113880118984	7.395187336330172	0.049241652188718156	0.04784213060339047	6.205039783073764e-09	8.207255429714966	-0.21638460205182386	
GLGPPS(ph)PPAPPR	ddPTM_K562_Methotrexat_30min_R1	1	GLGPPSPPAPPR	12	0	Q13425;A0A140TA73;Q13425-2	Q13425	SNTB2	Beta-2-syntrophin	1	GLGPPS(1)PPAPPR	126.12	0.00051446	69619000.0	1024.3	1019.8	1103.7	1167.2	1162.5	1242.8	1119.6	1205.3	1164.5	997.74	True	False	979.2729984621898	1188.3046163638505	872.0484529529176	1064.8733881949074	1315.389126217592	1482.9535109288317	1370.6988001524387	1162.9089158294569	1110.3626491736782	817.0396177017253	1.198562440848114	1.4544026882153738	1.0673270109054542	1.3033313992659512	1.6099453413503848	1.8150325624359258	1.6776405580039282	1.4233201066805516	1.3590071094680205	1.0	9.674262225154317	-6.258928136037358	23.196134378146617	1.4383317970221643	1.1985622181959192	0.05652210741405839	0.24153753695778377	255.34687846541848	2358189.1694157943	0.0641454816238544	0.4182747892150751	5.508988476875924e-07	6.258928136037358	-0.23976957882624506	
GLGS(ph)SPDLELLLR	ddPTM_K562_Methotrexat_30min_R1	1	GLGSSPDLELLLR	13	0	Q9NQQ7-2;Q9NQQ7;Q9NQQ7-3	Q9NQQ7-2	SLC35C2	Solute carrier family 35 member C2	1	GLGS(0.5)S(0.5)PDLELLLR	225.72	1.6602999999999998e-34	176410000.0	530.56	494.53	421.95	479.76	467.93	350.69	410.57	388.15	505.24	493.17	True	False	507.2372176746061	576.2426769272552	333.38846128792596	437.7001856754526	529.4709968438691	418.45587926265864	502.65077382867713	374.49854449448554	481.75150267798125	403.8521340849918	1.2559973685018502	1.4268654992571694	0.8255211082226532	1.0838129818656286	1.3110516254754778	1.036161119244187	1.2446406281039804	0.9273159973339927	1.1928908182433804	1.0	8.657683352873367	-6.731352532687512	24.99988353617259	1.0881128543379148	1.341431574174767	0.3500285150168575	0.14320290251594445	228.3181597864398	189711.9904484541	0.03540485434735539	0.09364686389117387	1.856297019288206e-07	6.731352532687512	0.2533187198368523	
GLGTDEDS(ph)LIEIICSR	ddPTM_K562_Methotrexat_30min_R1	4	GLGTDEDSLIEIICSR	16	0	P07355;H0YN42;H0YMU9;H0YMD0;P07355-2;H0YN28;A6NMY6;H0YM50;H0YNA0;H0YKS4;H0YNP5;H0YMM1;H0YL33;H0YN52;H0YLE2	P07355	ANXA2;ANXA2P2	Annexin A2;Annexin;Putative annexin A2-like protein	1	GLGTDEDS(1)LIEIICSR;GLGT(0.001)DEDS(0.999)LIEIICSR;GLGT(0.003)DEDS(0.996)LIEIICS(0.001)R;GLGTDEDS(1)LIEIICSR	243.9	1.3231999999999997e-64	20394000.0	4029.7000000000003	3920.76	4931.33	4737.289999999999	4221.85	4023.81	3951.65	4225.0199999999995	4040.5	4009.4000000000005	True	False	3852.559213026538	4568.598948474924	3896.3112236117736	4321.97914081721	4777.097275287521	4801.35433441466	4837.908104342968	4076.4236518358666	3852.6580369139083	3283.2588081196477	1.173394921990001	1.3914830403185312	1.186720709916629	1.3163687035967921	1.454986510193331	1.462374614678774	1.4735079952815788	1.241578532205468	1.1734250213190962	1.0	11.680912761796309	-9.8944719564609	1.9320460727133735	1.0083414325665834	1.3520030198318875	0.5326056708863715	0.10273882552449456	0.25370966592002786	2.0441730654065657	0.10392455428891716	0.029629930866096138	1.2750524307808573e-10	9.8944719564609	0.34366158726530416	
GLGTDEDSLIEIICSR	ddPTM_K562_Methotrexat_30min_R1	2	GLGTDEDSLIEIICSR	16	0	P07355;H0YN42;H0YMU9;H0YMD0;P07355-2;H0YN28;A6NMY6;H0YM50;H0YNA0;H0YKS4;H0YNP5;H0YMM1;H0YL33;H0YN52;H0YLE2	P07355	ANXA2;ANXA2P2	Annexin A2;Annexin;Putative annexin A2-like protein	0	;	208.51	5.5751000000000004e-21	9869500.0	1662.51	1966.06	1969.66	2168.11	1927.5700000000002	1719.27	1704.95	1977.02	1986.81	2291.1	False	True	1589.4280510332655	2290.9179976939713	1556.2552829965073	1978.035162507934	2181.0792413103172	2051.494595055207	2087.328438120669	1907.4870860143967	1894.4436367580545	1876.1595887870812	0.8471710298700204	1.2210677659756157	0.829489821813405	1.0543000575908974	1.1625233025727644	1.0934542068361455	1.11255377772533	1.0166976718902514	1.0097454651940316	1.0	10.87356683541476	-6.22015647512377	22.92606778665958	1.0552660825496922	0.8471691672114968	0.27830823956365436	0.10066000802185394	12123.454837401574	6732237.809104763	0.02462324860820911	7.563809278453315	6.023425245956672e-07	6.22015647512377	-0.2080969153381954	
GLGTDEDTLIEILASR	ddPTM_K562_Methotrexat_30min_R1	2	GLGTDEDTLIEILASR	16	0	P04083;Q5T3N1	P04083	ANXA1	Annexin A1;Annexin	0	;	232.6	4.9014999999999995e-50	47761000.0	1068.4	924.18	1104.12	888.08	797.78	956.3700000000001	815.01	1008.3899999999999	775.11	1093.3600000000001	False	True	1021.4344152660382	1076.8850366259494	872.3803006925572	810.2234052331502	902.7020534312863	1141.1749672087274	997.7967391141831	972.9243521391069	739.0753052821034	895.3419091249807	1.140831681010317	1.2027640230516978	0.9743543687630305	0.9049318444447474	1.008220484522498	1.274568916721434	1.1144309553088292	1.0866511912638466	0.8254671179241493	1.0	9.806294907238858	-9.742005033744134	24.655559808989548	0.9127336231306472	1.0866510796012716	0.2921139468755296	0.10932394743433141	244.22788609209036	309844.6946564779	0.08046483955000602	0.030308381045939362	1.8113190981789534e-10	9.742005033744134	0.1739174564706244	
GLIVYCVTS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	GLIVYCVTSPK	11	0	E9PCH4;Q8TEU7;Q8TEU7-4;A0A5F9ZHG7	E9PCH4	RAPGEF6	Rap guanine nucleotide exchange factor 6	1	GLIVYCVT(0.072)S(0.928)PK;GLIVYCVT(0.009)S(0.991)PK	156.48	1.0887999999999999e-07	19946500.0	6181.799999999999	4646.0	7474.2	6903.9	5170.799999999999	4487.1	4846.9	6634.700000000001	6909.7	8324.2	True	False	5910.055473878321	5413.672531502695	5905.467560986412	6298.645805996249	5850.850833415847	5354.168570074641	5933.940706018984	6401.353840416242	6588.469555169914	6816.606716852789	0.8670084280008132	0.7941887740301049	0.8663353786255916	0.9240148460412161	0.8583230742871977	0.7854595097642142	0.8705124048521712	0.9390821718656716	0.9665321513827623	1.0	12.734838034022774	-9.403602854266701	2.2127246595882024	0.9834971249891055	0.8498762229270785	0.6819537887331111	0.037417990326933534	0.2086646050742035	1.8918747401201792	0.03128732608939191	0.011441411833564192	3.9481818320846743e-10	9.403602854266701	-0.13362090206202692	
GLKEGMNPSYDEYADS(ph)DEDQHDAYLER	ddPTM_K562_Methotrexat_30min_R1	10	GLKEGMNPSYDEYADSDEDQHDAYLER	27	1	Q08945	Q08945	SSRP1	FACT complex subunit SSRP1	1	GLKEGMNPSY(0.002)DEY(0.394)ADS(0.604)DEDQHDAYLER;GLKEGMNPS(0.013)Y(0.012)DEY(0.038)ADS(0.937)DEDQHDAY(0.001)LER;GLKEGMNPS(0.002)Y(0.006)DEY(0.21)ADS(0.781)DEDQHDAY(0.001)LER;GLKEGMNPSYDEY(0.001)ADS(0.999)DEDQHDAYLER;GLKEGMNPS(0.004)Y(0.009)DEY(0.092)ADS(0.891)DEDQHDAY(0.005)LER;GLKEGMNPSYDEYADS(1)DEDQHDAYLER;GLKEGMNPSYDEY(0.001)ADS(0.999)DEDQHDAYLER;GLKEGMNPSYDEY(0.003)ADS(0.997)DEDQHDAYLER;GLKEGMNPSYDEY(0.063)ADS(0.936)DEDQHDAY(0.001)LER;GLKEGMNPS(0.002)Y(0.007)DEY(0.068)ADS(0.923)DEDQHDAYLER	132.61	1.7726e-17	972280000.0	15693.310000000001	11606.779999999999	18264.82	18176.38	11320.039999999999	12084.990000000002	11690.940000000002	15518.190000000002	16016.5	21636.170000000002	True	False	15003.450883038828	13524.603113472838	14431.283885533674	16582.884986050496	12808.823676858654	14420.24328133233	14312.930895546762	14972.406461906176	15271.896410897574	17717.64995422609	0.8468081783871195	0.7633406884329427	0.814514561627371	0.9359528509081463	0.7229414572446409	0.8138914200578137	0.807834613084947	0.8450560035099289	0.8619594839243822	1.0	14.11289963896027	-10.318616527604137	1.1906251747228869	0.9998217504881952	0.8143670287786069	0.5259330977361215	0.05211507227720274	0.8769595220555205	2.126444170634758	0.04949138115607877	0.015220695791465434	4.801572296995523e-11	10.318616527604137	-0.18545472170958832	
GLLAQGLRPES(ph)PPPAGPLLNGAPAGESPQPK	ddPTM_K562_Methotrexat_30min_R1	1	GLLAQGLRPESPPPAGPLLNGAPAGESPQPK	31	1	Q96TA1-2;Q96TA1	Q96TA1-2	FAM129B	Niban-like protein 1	1	GLLAQGLRPES(1)PPPAGPLLNGAPAGESPQPK	70.281	2.7755e-05	27884000.0	1077.8	983.49	1458.5	1275.7	769.86	1069.5	799.35	1109.5	984.75	1330.1	True	False	1030.421202521281	1145.9950060283222	1152.3807815817981	1163.861361652024	871.1100840515053	1276.165738605074	978.6245854786101	1070.4782561294135	938.9691874399133	1089.2060010674768	0.9460296780511824	1.052137983912308	1.0580007642745328	1.0685410845252241	0.7997661445105642	1.1716477299559196	0.89847520535097	0.9828060578809618	0.8620675854885818	1.0	10.089061120821912														
GLLAQGLRPESPPPAGPLLNGAPAGES(ph)PQPK	ddPTM_K562_Methotrexat_30min_R1	1	GLLAQGLRPESPPPAGPLLNGAPAGESPQPK	31	1	Q96TA1-2;Q96TA1	Q96TA1-2	FAM129B	Niban-like protein 1	1	GLLAQGLRPES(0.32)PPPAGPLLNGAPAGES(0.68)PQPK	76.60600000000001	6.575e-06	26945000.0	854.8	585.22	1042.9	967.07	894.93	573.0	655.28	750.32	976.99	1068.5	True	False	817.2240155086204	681.9176579608284	824.009542071757	882.2884745730373	1012.6289812695999	683.7241404588195	802.2432205822532	723.9308203145756	931.5699481461495	874.9842960233063	0.9339870660797008	0.7793484535208899	0.9417420927630094	1.0083477824492708	1.1573110350344245	0.7814130420011648	0.9168658503110831	0.8273643579716232	1.0646704773788715	1.0	9.773113313859566	-3.0000653711084166	0.011464027244884649	1.747492088046159	7.225371985055483e-06	0.044025145575409264	0.11370651274918533	42748.017821219786	37.95984880689153	2439.2913916639086	3424.2329710830286	0.0009998494887881965	3.0000653711084166	-1.747484862674174	
GLLEFEHQR	ddPTM_K562_Methotrexat_30min_R1	2	GLLEFEHQR	9	0	F5H6X6;Q14697;Q14697-2;E9PNH1;E9PKU7	F5H6X6	GANAB	Neutral alpha-glucosidase AB	0	;	183.43	4.3301e-08	30622800.0	13487.7	12560.7	11631.4	14870.8	12869.0	12120.900000000001	11853.4	15599.0	15300.300000000001	16920.6	False	True	12894.79685771598	14636.14217960523	9190.128092485797	13567.100052406468	14561.499066919738	14463.092380606107	14511.826686072642	15050.374328402633	14588.992392573662	13856.115376033647	0.9306213543818768	1.0562947682234778	0.6632542991365086	0.9791416774627124	1.0509077524070103	1.04380571235877	1.0473228817921905	1.0861900265665112	1.0528919539604615	1.0	13.75823522769862	-7.517640195038632	24.045237310685653	1.047760177675961	0.8874335099335983	0.38802769109638857	0.09189428287368283	143.37551915285243	658104.2574116302	0.026820334013816668	0.03573197176323196	3.0364057485272926e-08	7.517640195038632	-0.16032666774236282	
GLLPGGTQVLDGTSGFS(ph)PAPK	ddPTM_K562_Methotrexat_30min_R1	3	GLLPGGTQVLDGTSGFSPAPK	21	0	Q96S94;Q96S94-3	Q96S94	CCNL2	Cyclin-L2	1	GLLPGGTQVLDGT(0.001)S(0.01)GFS(0.989)PAPK;GLLPGGTQVLDGTS(0.001)GFS(0.999)PAPK;GLLPGGTQVLDGT(0.02)S(0.085)GFS(0.895)PAPK	276.88	4.304599999999999e-142	119118000.0	21783.8	17458.1	27102.5	23411.9	17629.2	16467.3	16049.5	20604.5	21693.1	26467.0	True	False	20826.21023518564	20342.754288038574	21414.055627576745	21359.415076319685	19947.748803367896	19649.372666976455	19649.008925550716	19879.82805625823	20684.592515920576	21673.5698295263	0.9609035520679993	0.9385973075983666	0.9880262363795735	0.9855051680144249	0.9203720919196576	0.906605271837026	0.9065884891183229	0.9172382866608148	0.9543694314603208	1.0	14.403649177244594	-7.771218232928396	24.972267043418874	0.9272976330637127	0.9675514534556886	0.22403843569880633	0.02940884934519634	248.22091065071857	633879.9207651792	0.008991137629445109	0.01032122494198603	1.693486609772356e-08	7.771218232928396	0.04025382039197589	
GLLS(ph)NHT(ph)GSPRSPSTTYLHTPTPSEDAAIPSK	ddPTM_K562_Methotrexat_30min_R1	1	GLLSNHTGSPRSPSTTYLHTPTPSEDAAIPSK	32	1	Q13111	Q13111	CHAF1A	Chromatin assembly factor 1 subunit A	2	GLLS(0.524)NHT(0.205)GS(0.185)PRS(0.18)PS(0.18)T(0.191)T(0.191)Y(0.18)LHT(0.134)PT(0.023)PS(0.007)EDAAIPSK	46.785	0.0099824	15717000.0	1341.2	911.35	1835.0	1352.6	1290.4	811.67	1128.7	908.06	1218.8	1650.0	True	False	1282.2424539075353	1061.9350971986614	1449.858576758725	1234.019658046976	1460.1102180397259	968.5137401155491	1381.8397067989088	876.1230151066925	1162.1382540256584	1351.1690111730977	0.9489874644137081	0.7859380199052074	1.0730401339651388	0.913297779805939	1.0806273722722848	0.716796886330805	1.0226993776294369	0.6484185234133176	0.8600983625406557	1.0	10.399992430332933	-8.262833357639625	24.99688817268994	0.8384473404204759	0.954330454277134	0.14831855792126702	0.13097243307956685	237.8624132946087	4265337.01541671	0.04296561382722091	0.03996953721638104	5.459673130475446e-09	8.262833357639625	0.11588311385665817	
GLLSNHTGS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	GLLSNHTGSPR	11	0	Q13111	Q13111	CHAF1A	Chromatin assembly factor 1 subunit A	1	GLLSNHT(0.082)GS(0.918)PR;GLLSNHT(0.076)GS(0.924)PR;GLLSNHTGS(1)PR;GLLSNHTGS(1)PR	168.76	1.4804e-07	143334600.0	11767.0	11527.6	13867.8	13530.299999999997	12232.900000000001	12055.2	12134.300000000001	13865.4	12622.100000000002	12833.000000000002	True	False	11249.736769407968	13432.339964302722	10957.138294700077	12344.11960614595	13841.740767404022	14384.696785443553	14855.725661566403	13377.746023016465	12035.301326006944	10508.819345687496	1.070504344907644	1.2781968670738404	1.0426612100051522	1.1746438110777502	1.3171546976001882	1.3688213977478452	1.4136436428191856	1.273001807620405	1.145257229200145	1.0	13.359312972750457	-6.252536544972816	23.542711511308028	1.2384396424948354	1.070504143388309	0.10432123165746532	0.12829755167563148	1161.4174733041689	3071103.3164272723	0.03336124020550432	0.3751161629963524	5.590664813154186e-07	6.252536544972816	-0.1679354991065265	
GLLTDS(ph)PAATVLAEAR	ddPTM_K562_Methotrexat_30min_R1	2	GLLTDSPAATVLAEAR	16	0	Q86UU1-3;Q86UU1-2;Q86UU1	Q86UU1-3	PHLDB1	Pleckstrin homology-like domain family B member 1	1	GLLT(0.035)DS(0.955)PAAT(0.01)VLAEAR;GLLT(0.033)DS(0.784)PAAT(0.183)VLAEAR	187.0	2.1248999999999997e-08	37572000.0	3485.8	2786.5	3866.2	3353.2	3014.6000000000004	3320.0	3008.3999999999996	3222.8	3680.8999999999996	3642.2	True	False	3332.5684057790686	3246.9217625984206	3054.737454749091	3059.2301621788574	3411.0727396950983	3961.543012780593	3683.110280795462	3109.4522972995705	3509.7757624245532	2982.5622863604003	1.1173508164504347	1.0886350227946509	1.0241990481535812	1.025705372916793	1.143671921050677	1.3282347969385866	1.2348812622082523	1.0425439601108928	1.1767652861685942	1.0	11.542336551429182	-7.900536806169917	6.167261483347378	1.1715437175695016	1.0637001045002565	0.18559750514290574	0.09014003363375632	0.3257684289915066	17.197612903822208	0.029173813511721162	0.03320671169777392	1.2573702885522277e-08	7.900536806169917	-0.10784361306924506	
GLLYDS(ph)DEEDEERPAR	ddPTM_K562_Methotrexat_30min_R1	15	GLLYDSDEEDEERPAR	16	1	P49736	P49736	MCM2	DNA replication licensing factor MCM2	1	GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR	266.07	7.896499999999997e-110	11224362600.0	35677.95999999999	31198.799999999996	42217.7	39131.899999999994	32552.599999999995	31605.260000000006	31706.850000000002	36829.13	35644.2	39689.19999999999	True	False	34109.599597983055	36353.87141107324	33356.781709006435	35701.267083194216	36833.83747966519	37712.529192805414	38817.91823116594	35533.82862295037	33987.108922006344	32501.101283788674	1.0494905788006847	1.1185427562482722	1.0263277363356473	1.0984633034881732	1.1333104425614542	1.1603461945339115	1.1943570124661607	1.0933115254366597	1.0457217626332829	1.0	14.98820098352876	-6.250697837338076	22.78430398462036	1.1036643246044897	1.0494904715164919	0.04577055822708587	0.05723379307884546	1384.4839532850515	2936473.684156334	0.014745049898145091	0.19480145552866562	5.614384639284987e-07	6.250697837338076	-0.054173853087997825	
GLLYDS(ph)DEEDEERPARK	ddPTM_K562_Methotrexat_30min_R1	4	GLLYDSDEEDEERPARK	17	2	P49736	P49736	MCM2	DNA replication licensing factor MCM2	1	GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK	219.84	2.6603999999999997e-29	293308500.0	13676.300000000001	9732.099999999999	18015.8	14781.900000000001	10282.499999999998	10147.3	8473.199999999999	11728.3	11732.1	15956.5	True	False	13075.106227539243	11340.164107584458	14234.52978047403	13485.993777380314	11634.828980931085	12108.12211252666	10373.530790864274	11315.809041336272	11186.677231747968	13066.623228353668	1.0006492112795575	0.8678725872325672	1.0893809006129513	1.0320947915691516	0.8904235453643685	0.9266450789101253	0.7938953017604754	0.8660086729050049	0.8561261036036956	1.0	13.673598737122125	-7.829470353513395	6.7365287335147634	0.878423090735216	0.9945916344258391	0.3497910703307723	0.07175098390137848	0.23479563633272293	18.532184293301544	0.02255852462552672	0.025770182047375068	1.4809133442312631e-08	7.829470353513395	0.11616854369062313	
GLNSSFETS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	GLNSSFETSPK	11	0	M0QZ79;M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63	M0QZ79	VRK3	Inactive serine/threonine-protein kinase VRK3	1	GLNSS(0.001)FET(0.297)S(0.702)PK;GLNSSFET(0.014)S(0.986)PK	127.17	0.0014058	48901000.0	9440.400000000001	6928.8	10776.6	9253.0	7802.6	7172.700000000001	6423.200000000001	8030.8	8712.6	10256.5	True	False	9025.411319615792	8073.666430537204	8514.73893095263	8441.803856209277	8828.778663419682	8558.722761376912	7863.766106769511	7748.352212099228	8307.553127686211	8398.948462482964	1.07458824874699	0.9612711003765825	1.0137863053913103	1.0051024713293268	1.0511766684670962	1.0190231312416833	0.936279838112587	0.9225383685481741	0.9891182407887126	1.0	13.0359930003007	-8.750761651352118	24.906579124128932	0.9555289769590436	1.0184627543082885	0.3981748415537756	0.03500951116255705	190.60825222430827	444608.203590408	0.013165936904809605	0.010089337585543688	1.77516345533288e-09	8.750761651352118	0.06293377734924488	
GLNVIGASDQS(ph)PLQSPSNLR	ddPTM_K562_Methotrexat_30min_R1	1	GLNVIGASDQSPLQSPSNLR	20	0	B4DJX4;Q9HAU0-5;Q9HAU0-8;Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;H0YGJ6;A0JP02	B4DJX4	PLEKHA5	Pleckstrin homology domain-containing family A member 5	1	GLNVIGAS(0.026)DQS(0.972)PLQS(0.001)PS(0.001)NLR	145.17	1.2337e-12	7218600.0	373.89	292.1	870.66	580.68	740.29	602.04	702.94	842.55	672.71	699.52	True	False	357.45424328324503	340.36456014893173	687.9203642728895	529.7726859638607	837.6511107506419	718.3757094621775	860.5921887988168	812.9170389381135	641.435858931408	572.8301495126095	0.6240143672384977	0.5941805968811692	1.2009150790303271	0.9248338035534894	1.4623027636784731	1.2540815284834517	1.5023514204534252	1.419124045111419	1.1197662334588558	1.0	9.161963617096935	-6.83348612783211	1.1316732451930362	1.3094537735306948	0.4814481784473502	0.6189814612335893	0.19039189183636765	0.43735577547727406	0.8606435685902508	0.061307358114373545	0.3457175705289379	1.467282953886845e-07	6.83348612783211	-0.8280055950833446	
GLPFYAGLS(ph)PAGK	ddPTM_K562_Methotrexat_30min_R1	1	GLPFYAGLSPAGK	13	0	Q8IWI9-3;Q8IWI9	Q8IWI9-3	MGA	MAX gene-associated protein	1	GLPFY(0.008)AGLS(0.992)PAGK	85.554	0.025779000000000003	13565000.0	1462.0	1392.8	1688.9	1689.6	1398.3	1248.0	1469.9	1400.5	1701.1	2004.4	True	False	1397.7322305493708	1622.9365264479025	1334.4229701840934	1541.4753912732301	1582.2009593032753	1489.158337334392	1799.5624922687298	1351.2436211890426	1622.0162322965602	1641.3837369668834	0.851557255667857	0.9887611835651122	0.8129865918191541	0.9391316342159731	0.9639433629499875	0.9072578847931142	1.0963691498455719	0.8232344397940781	0.9882005016656785	1.0	10.68069684874197	-7.50566135278109	23.788266087511523	0.9575887630540334	0.8917328695804438	0.16765758059936897	0.07736278153818181	790.6260038968802	1092361.1760940244	0.020932636618831105	0.030227334120814207	3.121322530469022e-08	7.50566135278109	-0.06585589347358956	
GLPLGSAVS(ph)S(ph)PVLFSPVGR	ddPTM_K562_Methotrexat_30min_R1	1	GLPLGSAVSSPVLFSPVGR	19	0	Q8WUM0	Q8WUM0	NUP133	Nuclear pore complex protein Nup133	2	GLPLGS(0.002)AVS(0.941)S(0.955)PVLFS(0.102)PVGR	99.34299999999999	0.0013404000000000003	4276000.0	989.62	676.37	878.34	1087.2	912.35	719.89	993.06	910.34	1007.6	1094.4	True	False	946.1174897375299	788.1286461757381	693.9884372262989	991.8868639868941	1032.3400166061251	858.9985540574158	1215.7789839937318	878.3228262143759	960.7568959273488	896.193555047175	1.0557066432906081	0.8794178910762772	0.7743733854343192	1.106777501802813	1.1519163586841277	0.9584966877073767	1.3566031323777308	0.9800592977575493	1.0720417375427067	1.0	9.80766654119829	-7.285771056513044	24.42087216641201	1.0968650077520814	0.9007911643153318	0.32016362977920165	0.12402349828507672	616.9057979824661	619165.49824001	0.034214364902606334	0.05077995823006029	5.1787976646496546e-08	7.285771056513044	-0.1960738434367496	
GLPLGSAVSS(ph)PVLFS(ph)PVGR	ddPTM_K562_Methotrexat_30min_R1	1	GLPLGSAVSSPVLFSPVGR	19	0	Q8WUM0	Q8WUM0	NUP133	Nuclear pore complex protein Nup133	2	GLPLGSAVS(0.252)S(0.751)PVLFS(0.997)PVGR	107.63	0.00085236	6896300.0	1220.3	1075.8	1696.3	1248.7	1235.4	1118.4	1041.5	1107.1	1150.9	1623.5	True	False	1166.6570731459622	1253.5576645266028	1340.269811311077	1139.2284097318202	1397.8767540036245	1334.5149715342816	1275.0828870657067	1068.1626654897464	1097.3949102052263	1329.4684179633489	0.8775365081129177	0.9429014240495942	1.0081245956667968	0.8569052068773751	1.051455405119794	1.0037959183555962	0.9590922731500783	0.8034509515661121	0.8254388711891008	1.0	10.376633790485844	-9.235884445420893	22.939171615166444	0.8608337062452491	0.9601006668412633	0.19258950285688703	0.07364582094157177	339.98321491627087	305183.5598138344	0.034070030002114796	0.019655991776251425	5.809189645384521e-10	9.235884445420893	0.09926696059601414	
GLPLGSAVSSPVLFS(ph)PVGR	ddPTM_K562_Methotrexat_30min_R1	2	GLPLGSAVSSPVLFSPVGR	19	0	Q8WUM0	Q8WUM0	NUP133	Nuclear pore complex protein Nup133	1	GLPLGSAVSSPVLFS(1)PVGR;GLPLGSAVSSPVLFS(1)PVGR	169.72	1.908e-12	34538000.0	2148.4	1963.12	2166.2	1937.3400000000001	2089.37	2313.0	2076.17	2665.5	2215.5	2256.1000000000004	True	False	2053.9589084215254	2287.4922126654265	1711.5442228745237	1767.4964101143953	2364.1587773292463	2759.954514626962	2541.803972769283	2571.7528541802176	2112.5018885738805	1847.4984279440162	1.1117513700443407	1.238156513730329	0.9264117343684083	0.9566971118245275	1.2796540129997265	1.4938873413269262	1.3758084631216294	1.392018967530157	1.1434390723269912	1.0	10.851357421429542	-7.863550798847102	6.547864563900003	1.3189928305309337	1.0626277079139959	0.3209701609183554	0.1533473352515256	0.22882024519860358	12.753827782547146	0.048043590313639965	0.0547445912220607	1.3691442320475224e-08	7.863550798847102	-0.2563651226169379	
GLPLGSAVSSPVLFS(ph)PVGRR	ddPTM_K562_Methotrexat_30min_R1	3	GLPLGSAVSSPVLFSPVGRR	20	1	Q8WUM0	Q8WUM0	NUP133	Nuclear pore complex protein Nup133	1	GLPLGSAVSSPVLFS(1)PVGRR;GLPLGSAVS(0.007)S(0.086)PVLFS(0.907)PVGRR;GLPLGSAVSS(0.015)PVLFS(0.985)PVGRR	205.53	1.1886e-21	29364300.0	2763.9	3016.2999999999997	3518.29	3322.45	2974.12	2849.68	3074.08	3103.1899999999996	3134.8	3471.48	True	False	2642.402265400416	3514.6923066662875	2779.8490092776315	3031.1759669364005	3365.26891016453	3400.3403291146387	3763.520692722946	2994.0490487951656	2989.063832228122	2842.7613326710234	0.9295195607988826	1.236365595054695	0.9778692911464782	1.066278738246501	1.1838028298360752	1.1961399256545118	1.3238961179997437	1.0532185781428207	1.0514649252737776	1.0	11.473077265624203	-6.238457512550492	23.519711823487437	1.1271347906594604	0.9295190689509829	0.2258471107964527	0.10580917312139614	4330.103719015148	4431291.493183424	0.027112795763035095	1.303161695637044	5.774873660985008e-07	6.238457512550492	-0.19761572170847752	
GLPNGPTHAFS(ph)SPSESPDSTVDR	ddPTM_K562_Methotrexat_30min_R1	1	GLPNGPTHAFSSPSESPDSTVDR	23	0	Q9ULJ7-2;Q9ULJ7	Q9ULJ7-2	ANKRD50	Ankyrin repeat domain-containing protein 50	1	GLPNGPTHAFS(0.485)S(0.485)PS(0.022)ES(0.006)PDS(0.001)T(0.001)VDR	87.92	0.00025355	26906000.0	644.81	802.09	1023.1	795.99	648.99	816.39	744.97	725.24	784.46	912.99	True	False	616.4649244736935	934.6217393011183	808.3652914887473	726.2067925542011	734.3435604507143	974.1458133144425	912.048486200038	699.7328981300549	747.990625822914	747.638663946016	0.8245492832326365	1.2500981882988913	1.0812245680583423	0.9713339178063665	0.9822172071397024	1.3029633970144456	1.2199054572515975	0.9359239053219696	1.0004707646806819	1.0	9.546197369399291	-9.29197011826796	24.918353526738617	0.9761479914523039	1.0955659285479744	0.12164729457255208	0.13677352837689993	1474.496871110399	1203435.2223102408	0.07622159398409044	0.03662221803789929	5.105401265981616e-10	9.29197011826796	0.1194179370956705	
GLPPS(ph)MER	ddPTM_K562_Methotrexat_30min_R1	10	GLPPSMER	8	0	P38159;P38159-2;H3BUY5	P38159	RBMX	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed	1	GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER	144.65	1.8947e-08	1654060000.0	65161.3	59231.79999999999	59663.299999999996	70024.9	57010.0	53944.700000000004	57114.5	52641.60000000001	59435.6	58601.9	True	False	62296.88727393759	69018.84818154563	47140.7886772364	63885.925737671016	64507.8142672386	64368.74980769432	69923.88051206364	50790.16509045706	56672.451928919756	47988.528045978645	1.298162077700109	1.4382364075726073	0.9823345411234533	1.331274959641621	1.3442340678887368	1.3413361990603567	1.45709575515774	1.058381391523285	1.1809583297620818	1.0	15.550401941440084	-9.28242813202533	24.850040658685177	1.0897523559832811	1.308286088967904	0.40762482377497233	0.12870490960492104	857.9194177776029	1015744.0772815691	0.07112487040388518	0.034225591711278654	5.218814591476816e-10	9.28242813202533	0.21853373298462286	
GLPPS(ph)VER	ddPTM_K562_Methotrexat_30min_R1	3	GLPPSVER	8	0	Q96E39	Q96E39	RBMXL1	RNA binding motif protein, X-linked-like-1	1	GLPPS(1)VER;GLPPS(1)VER;GLPPS(1)VER	94.40899999999999	0.017907	28142500.0	4613.459999999999	4434.32	5011.200000000001	5078.3	4870.6900000000005	4640.879999999999	4172.889999999999	4261.24	4756.5	5139.5	True	False	4410.657822401027	5167.016009447491	3959.417602099906	4633.093323569395	5511.271108109042	5537.664378660602	5108.766806152298	4111.369773906174	4535.371353194163	4208.686747226751	1.0479890966718683	1.2277026825178226	0.9407727017718539	1.1008406188990663	1.3094990050615214	1.315770146663816	1.2138624499717496	0.9768771165055933	1.0776215065620351	1.0	12.039154418470156	-9.262019363940905	24.999809049660303	1.020436979168785	1.1678421265666392	0.2682946054946489	0.11119811633859934	80.6218835851007	3474945.4940503463	0.061842072312738305	0.032571263577266925	5.469915735704084e-10	9.262019363940905	0.14740514739785415	
GLPSDY(ph)GRPLSFPPPR	ddPTM_K562_Methotrexat_30min_R1	4	GLPSDYGRPLSFPPPR	16	1	O15357;O15357-2;H0YFZ4;H7BXR2	O15357	INPPL1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	GLPS(0.423)DY(0.576)GRPLSFPPPR;GLPS(0.059)DY(0.933)GRPLS(0.008)FPPPR;GLPS(0.006)DY(0.994)GRPLSFPPPR;GLPS(0.09)DY(0.905)GRPLS(0.005)FPPPR	134.4	7.9937e-05	180997000.0	10364.7	8531.2	9836.1	10819.800000000001	8816.7	8466.5	8845.0	9380.8	10381.9	10197.7	True	False	9909.08019834136	9940.835794394276	7771.637028259673	9871.24493282321	9976.2505884926	10102.531300514116	10828.716405277179	9050.871946911946	9899.247735041823	8350.797712266609	1.186602830024941	1.1904055321316234	0.9306460647279003	1.1820720933430342	1.1946464196873479	1.2097684135821372	1.2967283819329882	1.083833216749699	1.1854254019949104	1.0	13.027698302675297														
GLPSTAS(ph)GRLR	ddPTM_K562_Methotrexat_30min_R1	2	GLPSTASGRLR	11	1	H7BYT1;P48730-2;P48730	H7BYT1	CSNK1D	Casein kinase I isoform delta	1	GLPS(0.001)T(0.029)AS(0.97)GRLR;GLPS(0.024)T(0.018)AS(0.957)GRLR	96.756	0.0071321	29865800.0	5111.200000000001	4928.4	4746.200000000001	5620.5	4613.3	4831.9	5140.1	4393.1	4536.6	5744.0	True	False	4886.517767978073	5742.734331523433	3750.0374806606333	5127.759491389199	5220.0298115953665	5765.596290197155	6292.8982696173225	4238.592182967216	4325.694456196918	4703.705939501985	1.0388654883675494	1.2208956948808447	0.7972516838622093	1.0901530744781447	1.1097695899221218	1.2257561089815066	1.337859626123566	0.901117594824813	0.9196353921425007	1.0	12.199582155022807														
GLPVTCEVAPHHLFLSHDDLER	ddPTM_K562_Methotrexat_30min_R1	1	GLPVTCEVAPHHLFLSHDDLER	22	0	P27708;F8VPD4	P27708	CAD	CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase	0		49.559	0.018151	7978300.0	2062.2	2085.7	1746.5	2340.9	1739.8	1504.6	1573.2	2122.2	1995.1	2331.6	False	True	1971.5481572085582	2430.32647416168	1379.9335173346658	2135.6769314817143	1968.6141950910676	1795.3426557318312	1926.0301468379928	2047.5610231255894	1902.3482364675017	1909.324646334059	1.0325892775720302	1.2728723105460116	0.7227338315588003	1.1185509680515862	1.0310526284101793	0.9403024567764966	1.0087494290381727	1.0724006664120462	0.9963461374261563	1.0	10.898846712618894	-6.69667048650456	24.99999999979296	0.9943219261457285	1.152729519936001	0.2540233901078832	0.11343309346034627	82.04532282774046	31666.521906857124	0.027179161440192435	0.07190928292054331	2.0106177557886428e-07	6.69667048650456	0.15840759379027258	
GLQLT(ph)PGIGGMQQHFFDDEDR	ddPTM_K562_Methotrexat_30min_R1	2	GLQLTPGIGGMQQHFFDDEDR	21	0	P12270	P12270	TPR	Nucleoprotein TPR	1	GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR	84.499	0.0099204	37235000.0	3487.5699999999997	2672.48	3063.28	2426.85	2578.96	2533.42	2404.96	3378.2000000000003	3273.95	3507.3	True	False	3334.2605986984067	3114.0618956070452	2420.3393901980735	2214.0918284276995	2918.1384438280597	3022.967560071871	2944.333499834415	3259.3867912180112	3121.7447791001846	2872.093983568125	1.1609162575369878	1.0842479088161012	0.8427089795965459	0.7708981116547721	1.0160316690621425	1.0525308633237376	1.0251522118285779	1.1348468434061254	1.0869229199881223	1.0	11.487887243923742	-7.995483239502575	24.98095369416636	1.0626066911379268	0.9556375418414075	0.14480602941836707	0.10807190732778148	254.3663078293053	1406810.7036164105	0.03731104981333826	0.042146868172293614	1.0104544957120978e-08	7.995483239502575	-0.10696914929651935	
GLQLT(ph)PGIGGMQQHFFDDEDRT(ph)VPSTPTLVVPHR	ddPTM_K562_Methotrexat_30min_R1	1	GLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHR	34	1	P12270	P12270	TPR	Nucleoprotein TPR	2	GLQLT(0.956)PGIGGMQQHFFDDEDRT(0.406)VPS(0.317)T(0.317)PT(0.004)LVVPHR	65.093	3.8943e-05	8250600.0	994.81	786.42	425.6	489.31	404.56	397.67	462.9	915.88	869.26	901.64	True	False	951.0793435518608	916.3625381455765	336.27237616812715	446.41295200278427	457.7667310990015	474.5140993651984	566.7171084231547	883.6679812742747	828.8482923320838	738.344258929765	1.2881245192187947	1.2411047110650664	0.45544117408802803	0.6046135614975362	0.6199909128602659	0.64267324303843	0.7675513171113635	1.1968237994498085	1.1225770124271095	1.0	9.528149831055991	-9.25493941130783	23.883309485269457	1.1197753129860364	0.78547390084382	0.2217976324620775	0.25889717714569194	428.48478827489794	1574424.4746670749	0.13931458651318515	0.0778399073631175	5.559818172277517e-10	9.25493941130783	-0.3343014121422164	
GLQLT(ph)PGIGGMQQHFFDDEDRTVPS(ph)TPTLVVPHR	ddPTM_K562_Methotrexat_30min_R1	1	GLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHR	34	1	P12270	P12270	TPR	Nucleoprotein TPR	2	GLQLT(0.733)PGIGGMQQHFFDDEDRT(0.347)VPS(0.395)T(0.395)PT(0.13)LVVPHR	45.339	0.0066676999999999995	10161000.0	970.96	867.36	619.64	623.31	624.37	541.2	638.44	1137.4	954.39	1082.6	True	False	928.2777609946771	1010.6764974008125	489.58603188162203	568.6653800512058	706.4855989130991	645.7792405171255	781.6264219090064	1097.3969973155436	910.020617213282	886.530649391513	1.0470904323858607	1.140035596168626	0.5522494142956689	0.6414503327567074	0.7969105178687379	0.7284341956596404	0.881668809133097	1.2378556771486273	1.0264965095542853	1.0	9.792026699027035	-9.0875052677949	5.8801713745365065	1.0966665145801515	0.8107178332413236	0.32662459865584303	0.17355231419427752	0.28470994577088965	15.200018041151553	0.09004960517792197	0.05169659449274814	8.175131218204878e-10	9.0875052677949	-0.2859486813388279	
GLQLT(ph)PGIGGMQQHFFDDEDRTVPSTPTLVVPHR	ddPTM_K562_Methotrexat_30min_R1	2	GLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHR	34	1	P12270	P12270	TPR	Nucleoprotein TPR	1	GLQLT(1)PGIGGMQQHFFDDEDRTVPSTPTLVVPHR;GLQLT(0.938)PGIGGMQQHFFDDEDRT(0.012)VPS(0.034)T(0.013)PT(0.003)LVVPHR	74.381	2.0367e-06	102353000.0	3676.2	2486.9	2545.0	2185.23	2045.78	2065.34	2409.6	3426.7	3168.6	3509.7	True	False	3514.59864975759	2897.817954927692	2010.8392794828087	1993.6542786884486	2314.8359282868187	2464.4377247036964	2950.014137948659	3306.181018727951	3021.2924776055956	2874.059320311652	1.2228692097338063	1.0082665776757398	0.6996512790364957	0.6936719310554329	0.8054238518764487	0.8574762905159738	1.0264277139654763	1.150352393690135	1.0512282945078455	1.0	11.488874123853385	-8.845859007043362	4.232722813961079	1.0773234114143675	0.8665230865288087	0.24917327965976643	0.14867525110027865	0.31266922172243217	10.410295525837927	0.07132387937014208	0.04755969123666879	1.4260704897908103e-09	8.845859007043362	-0.21080032488555878	
GLQVDLQS(ph)DGAAAEDIVASEQSLGQK	ddPTM_K562_Methotrexat_30min_R1	3	GLQVDLQSDGAAAEDIVASEQSLGQK	26	0	A0A3B3ITP6;A0A3B3IS57;A0A3B3IU45;A0A3B3IT92;P33991	A0A3B3ITP6	MCM4	DNA replication licensing factor MCM4	1	GLQVDLQS(1)DGAAAEDIVASEQSLGQK;GLQVDLQS(1)DGAAAEDIVASEQSLGQK;GLQVDLQS(1)DGAAAEDIVASEQSLGQK	138.85	3.4666999999999996e-17	40246300.0	7148.799999999999	4984.4	8331.4	7157.200000000001	5011.9	5186.1	5146.6	6463.7	6381.6	7422.5	True	False	6834.547311731427	5807.987379686187	6582.752995317515	6529.739388269871	5671.052698227912	6188.240427283566	6300.856060079086	6236.368007339961	6084.920808902317	6078.213324504437	1.1244336035686366	0.9555418787740093	1.0830078912793364	1.074285984985933	0.933013106888656	1.0181018823961892	1.0366296350075541	1.0260199296062744	1.001103528954938	1.0	12.569431594073773														
GLRDSHS(ph)S(ph)EEDEASSQTDLSQTISKK	ddPTM_K562_Methotrexat_30min_R1	1	GLRDSHSSEEDEASSQTDLSQTISKK	26	2	A0A0A0MSK5;Q5JTV8;H0YDU3;J3KN66;Q5JTV8-2;Q5JTV8-3	A0A0A0MSK5	TOR1AIP1	Torsin-1A-interacting protein 1	2	GLRDS(0.348)HS(0.804)S(0.804)EEDEAS(0.037)S(0.005)QT(0.001)DLSQTISKK	66.711	0.0014554	13099000.0	2146.3	1621.0	3116.6	2450.1	1453.3	1440.9	1259.6	1792.7	1992.8	2575.1	True	False	2051.951221907055	1888.84269771112	2462.4682508589863	2235.3035370256516	1644.4344233393783	1719.333532263722	1542.0973639442775	1729.649724887967	1900.1551629654841	2108.724436770814	0.9730769872659613	0.8957276089632608	1.167752508540128	1.0600263827969263	0.7798242362371329	0.8153429164488727	0.7312939220763058	0.8202350647278782	0.9010922099785017	1.0	11.042154864061702	-7.75954264321938	24.99932533472408	0.8255118374972349	1.0252307783152057	0.4714731999831613	0.09395128335432971	42.490490138829266	560025.9404148182	0.028867452956606136	0.03538357182118784	1.739631875822126e-08	7.75954264321938	0.1997189408179708	
GLS(ph)GPCRPPPPPQAR	ddPTM_K562_Methotrexat_30min_R1	1	GLSGPCRPPPPPQAR	15	1	Q9UEE5	Q9UEE5	STK17A	Serine/threonine-protein kinase 17A	1	GLS(1)GPCRPPPPPQAR	203.85	8.509299999999999e-13	46354000.0	4849.9	4692.3	4480.6	5473.7	4689.9	4377.3	4454.9	4575.0	4736.7	5589.0	True	False	4636.70420310629	5467.622819537257	3540.1832910218764	4993.829219467494	5306.704054234737	5223.151274049544	5454.024727401841	4414.094656865317	4516.491850872446	4576.777941482696	1.0130935479915768	1.1946445489478918	0.7735099531341902	1.0911233368358897	1.1594847121893734	1.1412289040087114	1.1916734430062716	0.9644546257875303	0.9868278314174185	1.0	12.16011658086255	-5.986302217363236	17.762642543404706	1.0599427679785443	0.9311343704962847	0.00970018794593952	0.1237281196405077	4969.524263392325	2474.151851849977	0.030493420504673432	16670.65414843689	1.0320429765194523e-06	5.986302217363236	-0.12880839748225958	
GLS(ph)GYS(ph)MLAIGIGT(ph)LIYGHWS(ph)IMK	ddPTM_K562_Methotrexat_30min_R1	1	GLSGYSMLAIGIGTLIYGHWSIMK	24	0	U3KQP3;B4DEZ3;K7EJE1;E7ENQ6;Q9P0J0;Q9P0J0-2	U3KQP3	NDUFA13	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13	4	GLS(0.763)GY(0.26)S(0.978)MLAIGIGT(0.993)LIY(0.075)GHWS(0.931)IMK	46.668	0.017743000000000002	30672000.0	1445.8	1336.8	1913.6	1791.6	1612.0	1354.9	1518.3	1741.7	1640.7	2114.6	True	False	1382.2443631520393	1557.6834782851495	1511.961510891279	1634.5332096384475	1824.0062550217276	1616.7152494025383	1858.8174243224794	1680.4434237950431	1564.424215113142	1731.625449107051	0.7982351864052487	0.8995498877014089	0.8731458131843428	0.9439299996897879	1.053349184699448	0.9336402685905497	1.0734523596202732	0.9704427852233282	0.9034426099015063	1.0	10.757911193276447	-7.314331936493451	2.533873642126836	0.9897193131512861	0.8552832529410387	0.5560852619626842	0.05268908441698403	0.21957415612037476	2.7659297336659137	0.015571063996671861	0.02714619459820005	4.849177300375643e-08	7.314331936493451	-0.13443606021024745	
GLS(ph)PAMS(ph)PALQR	ddPTM_K562_Methotrexat_30min_R1	4	GLSPAMSPALQR	12	0	Q96DF8	Q96DF8	DGCR14	Protein DGCR14	2	GLS(1)PAMS(1)PALQR;GLS(1)PAMS(1)PALQR;GLS(1)PAMS(1)PALQR;GLS(1)PAMS(1)PALQR	153.49	1.8635000000000002e-07	134484000.0	11273.9	10202.0	11098.599999999999	11906.2	10324.4	9141.4	10280.1	11017.7	10582.8	11813.800000000001	True	False	10778.312854986698	11887.707095650125	8769.155531342984	10862.40193156803	11682.239565351314	10907.846173804966	12585.674111689079	10630.201246108198	10090.807937891965	9674.206341937426	1.1141288984361435	1.2288043768631678	0.9064470222563817	1.1228209888887535	1.2075656805777564	1.1275184535314018	1.3009515888792362	1.0988189491086786	1.0430631290288468	1.0	13.239927594134421	-9.751550179349344	3.298288581333504	1.010330517375042	1.1422140644976513	0.19834572891010638	0.09745462051074169	0.40320100180010965	8.439655837355108	0.09052283139092113	0.026035583566689995	1.7719432990413033e-10	9.751550179349344	0.1318835471226092	
GLS(ph)PAMSPALQR	ddPTM_K562_Methotrexat_30min_R1	4	GLSPAMSPALQR	12	0	Q96DF8	Q96DF8	DGCR14	Protein DGCR14	1	GLS(1)PAMSPALQR;GLS(0.948)PAMS(0.052)PALQR;GLS(0.995)PAMS(0.005)PALQR;GLS(0.95)PAMS(0.05)PALQR	147.33	7.0255e-22	70275000.0	8580.23	9051.0	10367.5	9806.5	9389.0	8737.2	8435.390000000001	9728.800000000001	9465.5	9797.4	True	False	8203.05336287731	10546.523909304973	8191.5034302703425	8946.779370573471	10623.818069726423	10425.54024435741	10327.240935885935	9386.632589663666	9025.450971020568	8022.995921252918	1.0224426689720008	1.3145368653830707	1.021003065522076	1.1151419567437957	1.324170942376267	1.2994572534606619	1.287205058714921	1.169966017905914	1.1249477202290663	1.0	12.9699253484798	-6.22763950044505	22.76514271694256	1.1933197057896587	1.0224415513525347	0.1485445369434315	0.1141458317421576	8683.155769015531	5848011.599792869	0.028844102308142196	3.954073760791914	5.920528820494526e-07	6.22763950044505	-0.17087815443712406	
GLSAS(ph)LPDLDSENWIEVK	ddPTM_K562_Methotrexat_30min_R1	4	GLSASLPDLDSENWIEVK	18	0	Q6PKG0;A0A0B4J210;Q6PKG0-3;E5RH50;H0YBW1;H0YC73	Q6PKG0	LARP1	La-related protein 1	1	GLS(0.001)AS(0.999)LPDLDS(0.001)ENWIEVK;GLSAS(1)LPDLDSENWIEVK;GLS(0.001)AS(0.999)LPDLDSENWIEVK;GLS(0.011)AS(0.988)LPDLDS(0.001)ENWIEVK	208.07	1.3747000000000002e-26	1965440000.0	20299.800000000003	15793.2	25002.899999999998	21439.5	15880.9	15398.5	15315.3	18166.800000000003	19698.5	24466.7	True	False	19407.44509829421	18402.757861499864	19755.13297484507	19559.932321971137	17969.51670928943	18374.042193464444	18750.14588600808	17527.86334695973	18782.721034562215	20035.543542829608	0.9686507908710975	0.9185055460142936	0.9860043443600565	0.9762616262522769	0.8968819174222217	0.9170723097272903	0.9358441334983622	0.8748384244974808	0.9374700014706735	1.0	14.290274028619777	-7.754005423810227	24.99484978437754	0.9207037606412765	0.9609126306310254	0.183845198478369	0.03493702498115188	249.39569234934413	838527.102679477	0.009963966871260393	0.012607248346423402	1.7619540416097637e-08	7.754005423810227	0.04020886998974893	
GLSASLPDLDS(ph)ENWIEVKK	ddPTM_K562_Methotrexat_30min_R1	1	GLSASLPDLDSENWIEVKK	19	1	Q6PKG0;A0A0B4J210;Q6PKG0-3;E5RH50;H0YBW1;H0YC73	Q6PKG0	LARP1	La-related protein 1	1	GLS(0.041)AS(0.439)LPDLDS(0.52)ENWIEVKK	59.251999999999995	0.029843	25317000.0	2806.9	2027.6	4123.1	2994.0	2316.5	1849.6	1474.9	2377.9	2566.0	3744.2	True	False	2683.512036887163	2362.626436692826	3257.717655495315	2731.5206684848786	2621.1603534477867	2207.0090230237906	1805.6838695470096	2294.2679091934488	2446.7072200769912	3066.0890979601886	0.8752231103370262	0.7705667908556985	1.062499344087102	0.8908810478802158	0.8548872096351001	0.7198124230936642	0.5889208734176372	0.7482717676794788	0.7979896023585027	1.0	11.5821839057676	-8.10130934958939	3.7419367850563825	0.7445117719053693	0.8999903297221744	0.19770846918692087	0.11706578174159976	0.3295960927448581	8.382127730467667	0.039767168493587905	0.040460071419733554	7.919370298090717e-09	8.10130934958939	0.15547855781680509	
GLSDHVS(ph)LDGQELGTR	ddPTM_K562_Methotrexat_30min_R1	2	GLSDHVSLDGQELGTR	16	0	Q7L8J4-2;Q7L8J4	Q7L8J4-2	SH3BP5L	SH3 domain-binding protein 5-like	1	GLS(0.001)DHVS(0.999)LDGQELGTR;GLSDHVS(1)LDGQELGTR	117.13	0.00066266	208931000.0	6216.5	6152.5	6604.4	5941.6	5785.1	5751.5	6118.7	6872.4	7293.099999999999	6977.700000000001	True	False	5943.230103426923	7169.096050381045	5218.226694466119	5420.709152929108	6545.942050822699	6862.895975303487	7490.974230522266	6630.6937966866	6954.045372854056	5713.970914704562	1.040122568375764	1.2546609279952414	0.9132399818552321	0.9486763642739653	1.145602970077623	1.2010729626995886	1.310992712833853	1.1604353427181273	1.2170249860667361	1.0	12.480277977338492	-7.962502646192918	8.295889868635712	1.1937992493946283	1.0453924430577954	0.2540966590040524	0.11119535692730982	0.3367447998019873	66.0097391710586	0.0351854857662769	0.03978232611753666	1.0901778498192787e-08	7.962502646192918	-0.1484068063368329	
GLSHS(ph)PWAVK	ddPTM_K562_Methotrexat_30min_R1	1	GLSHSPWAVK	10	0	E5RFX4;Q96KB5;Q96KB5-2	E5RFX4	PBK	Lymphokine-activated killer T-cell-originated protein kinase	1	GLS(0.365)HS(0.635)PWAVK	108.7	0.0032963000000000003	8942700.0	1751.8	1469.9	2642.5	1898.8	1568.6	1439.2	1562.8	1757.5	1930.4	2218.9	True	False	1674.7929695460923	1712.7759909719778	2087.8753618991454	1732.335152077184	1774.8983943096046	1717.3050313234417	1913.2976820991719	1695.6877288395174	1840.6561253455286	1817.0357084193856	0.9217171472116922	0.9426209859474353	1.149055768263002	0.953385309958558	0.9768098590938338	0.9451135293413148	1.0529774804280116	0.9332165135678995	1.0129994236308597	1.0	10.827371056382361														
GLSPEGLPGRS(ph)SPPEQIFHLVPSPEELANSLQHLEHEPVNR	ddPTM_K562_Methotrexat_30min_R1	1	GLSPEGLPGRSSPPEQIFHLVPSPEELANSLQHLEHEPVNR	41	1	F5GYM4;Q9UQQ2	F5GYM4	SH2B3	SH2B adapter protein 3	1	GLS(0.021)PEGLPGRS(0.686)S(0.287)PPEQIFHLVPS(0.006)PEELANSLQHLEHEPVNR	41.233999999999995	0.0060327	2317000.0	135.46	366.85	126.83	310.39	125.3	56.453	227.75	0.0	216.69	348.2	True	False	129.50534059522423	427.4657271161781	100.21011623450086	283.17859061156383	141.77914624951765	67.36174328328396	278.82873502565	0.0	206.61612919660314	285.13760587301385	0.4541854105799692	1.4991559103801626	0.351444755691501	0.9931295794693511	0.49723061191956225	0.2362429293640192	0.9778742939639695	0.0	0.7246190082995216	1.0	8.155514513963494	-7.776316238634675	24.793016462337103	0.5261008168138408	0.8388819730118534	0.07629371881312297	0.40927532542341005	455.1803584807509	758577.1977535344	0.11898757909845369	0.13547448850081467	1.673723682900675e-08	7.776316238634675	0.3127811561980126	
GLSPHCNGSDCGYS(ph)SSMEGSETGSR	ddPTM_K562_Methotrexat_30min_R1	1	GLSPHCNGSDCGYSSSMEGSETGSR	25	0	Q9H3C7	Q9H3C7	GGNBP2	Gametogenetin-binding protein 2	1	GLSPHCNGSDCGY(0.004)S(0.802)S(0.077)S(0.117)MEGSETGSR	115.69	2.4104e-07	11404000.0	2477.7	1900.7	1384.0	2758.4	1712.0	1951.2	1840.1	1617.2	2150.6	1865.4	True	False	2368.7832747142106	2214.7583686240137	1093.517313479061	2516.575354692281	1937.1580078146378	2328.241785101654	2252.7892659525746	1560.322159362314	2050.619075408255	1527.5579839044224	1.5506994167642822	1.4498686085637904	0.7158597742286954	1.6474499699578935	1.2681404098738576	1.5241593508291529	1.4747651412841747	1.0214487278408555	1.3424165216739556	1.0	10.577011428374613	-9.994209269600814	1.0273916848427298	1.018290990184595	1.3540169165187186	0.134912980572088	0.26281630707517	1.1829883850417189	2.8147959727327523	0.2489271610764602	0.0826588532896293	1.013422939009486e-10	9.994209269600814	0.3357259263341237	
GLSPHCNGSDCGYSS(ph)SMEGSETGSR	ddPTM_K562_Methotrexat_30min_R1	1	GLSPHCNGSDCGYSSSMEGSETGSR	25	0	Q9H3C7	Q9H3C7	GGNBP2	Gametogenetin-binding protein 2	1	GLSPHCNGSDCGY(0.001)S(0.217)S(0.565)S(0.217)MEGSETGSR	98.72200000000001	1.7102e-05	10963000.0	1347.8	1182.3	666.11	1242.6	803.91	1119.9	1064.6	925.93	1292.0	1110.0	True	False	1288.5523258101525	1377.654979336125	526.3026139317466	1133.6631872609596	909.6382558774915	1336.3048253051159	1303.3636500913603	893.3645170778794	1231.9352020029123	908.9682438800845	1.4175988374574553	1.5156249831736388	0.5790110022822524	1.2471977925452342	1.000737112657035	1.4701336755186	1.4338934928328546	0.9828335842233631	1.355311596744226	1.0	9.828086082437224	-12.934362149679874	2.3678206892639766	0.8512876123193934	1.2128369952612132	0.05373302746271513	0.2774488318731476	34464253.187618926	15522507.10404879	28302467.75273799	0.06940981574047858	1.1631556920970994e-13	12.934362149679874	0.3615493829418198	
GLSPHCNGSDCGYSSS(ph)MEGSETGSR	ddPTM_K562_Methotrexat_30min_R1	1	GLSPHCNGSDCGYSSSMEGSETGSR	25	0	Q9H3C7	Q9H3C7	GGNBP2	Gametogenetin-binding protein 2	1	GLSPHCNGSDCGY(0.02)S(0.279)S(0.279)S(0.42)MEGS(0.001)ET(0.001)GSR	83.115	0.0055623999999999995	5069200.0	850.11	808.57	444.93	837.6	620.65	671.79	623.18	653.13	842.08	699.26	True	False	812.7401822929729	942.1724491599509	351.5452733282068	764.1689084578938	702.2763537092029	801.6039098059857	762.9439784556957	630.1590477023921	802.9318845995455	572.6172380320611	1.4193428494855533	1.64537912340529	0.6139271575832714	1.3345195668299243	1.2264324352559608	1.3998948277577064	1.3323803891718995	1.1004891327897977	1.4022139594662166	1.0	9.161427291563326	-12.156904210447362	5.517982382627466	0.9999940534611221	1.2669635575891591	0.09185111542138436	0.2582706729012777	1.8693548592102964e-05	2.856373353394724e-06	0.2474169074796671	0.06000607785047723	6.967801815058623e-13	12.156904210447362	0.266969504128037	
GLSQNQQIPQNSVT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	GLSQNQQIPQNSVTPR	16	0	Q8WYP5;Q8WYP5-3;Q8WYP5-2	Q8WYP5	AHCTF1	Protein ELYS	1	GLSQNQQIPQNS(0.428)VT(0.572)PR;GLSQNQQIPQNS(0.425)VT(0.575)PR;GLSQNQQIPQNSVT(1)PR;GLSQNQQIPQNS(0.299)VT(0.701)PR	276.38	1.2245999999999995e-128	81503000.0	10639.2	11222.0	13477.3	12449.4	12052.1	11243.4	11864.800000000001	11753.0	11661.9	12438.8	True	False	10171.513507018377	13076.24475861456	10648.598908201831	11357.98043094043	13637.162398354443	13416.02792466786	14525.783426267108	11339.640328336178	11119.74081442552	10186.012785563595	0.998576550132966	1.2837451742793045	1.0454138564693194	1.1150565653164934	1.338812613477384	1.3171029928101103	1.4260519530128777	1.1132560469988408	1.0916676670762948	1.0	13.314301812780865	-6.246697861745293	23.832399952909153	1.2046567050006078	0.9985762693100156	0.15101397951338935	0.1350200968322175	2661.8177688715405	4303187.3383780215	0.03502526952484457	0.7185739828396066	5.666333582296754e-07	6.246697861745293	-0.2060804356905922	
GLSS(ph)AGGGSPHREDAQPEHSASAR	ddPTM_K562_Methotrexat_30min_R1	1	GLSSAGGGSPHREDAQPEHSASAR	24	1	Q92994-9;Q92994-3;Q92994-7;Q92994-8;Q92994-5;Q92994	Q92994-9	BRF1	Transcription factor IIIB 90 kDa subunit	1	GLS(0.159)S(0.581)AGGGS(0.26)PHREDAQPEHSASAR	50.776	0.027505	13348000.0	1365.5	1547.1	1604.9	1489.5	1335.2	1603.0	1400.1	1552.9	1437.3	1817.1	True	False	1305.4742550035332	1802.7319787963443	1268.0534222561732	1358.9178475979381	1510.80220329095	1912.7570630985804	1714.1080654639418	1498.2836268079018	1370.4802367173277	1488.0055819409918	0.8773315576549383	1.211508881871811	0.8521832428895143	0.9132478157947039	1.0153202525760836	1.2854501934082345	1.151950023754626	1.0069072623057658	0.9210182094408805	1.0	10.539164223086178	-4.104303448173184	12.971953364079017	1.031703164827425	0.24207847998563958	0.0	0.13978773525244015	0.0	0.0	0.033227826045097116	0.0	7.864960608815213e-05	4.104303448173184	-0.7896246848417855	
GLSSAGGGS(ph)PHREDAQPEHSASAR	ddPTM_K562_Methotrexat_30min_R1	2	GLSSAGGGSPHREDAQPEHSASAR	24	1	Q92994-9;Q92994-3;Q92994-7;Q92994-8;Q92994-5;Q92994	Q92994-9	BRF1	Transcription factor IIIB 90 kDa subunit	1	GLS(0.04)S(0.114)AGGGS(0.846)PHREDAQPEHSASAR;GLS(0.071)S(0.22)AGGGS(0.709)PHREDAQPEHS(0.001)ASAR	61.985	0.005261399999999999	5200000.0	427.69	357.76	544.3	487.39	494.8	355.56	354.49	663.48	479.08000000000004	581.94	True	False	408.889259701546	416.8737591197598	430.05886829960457	444.66127542179197	559.8748728193241	424.26693783863504	433.9934062754895	640.145032335956	456.8076753680773	476.545026886105	0.858028594639539	0.8747835683938284	0.9024516971874502	0.9330939372662191	1.1748624814694268	0.8902976925620829	0.9107080795939448	1.3433044019341989	0.9585823995541455	1.0	8.89646872499343	-7.539530309045264	22.843482924165624	1.0493424704283938	0.8846766918137133	0.2717492578845838	0.12588869753861165	117.90810284282689	161750.33077332584	0.037671543911140665	0.04865497109534137	2.8871522802374202e-08	7.539530309045264	-0.16466577861468046	
GLSVTS(ph)EQINPHSTGAR	ddPTM_K562_Methotrexat_30min_R1	1	GLSVTSEQINPHSTGAR	17	0	Q9ULI0-2;Q9ULI0;H7BYF1	Q9ULI0-2	ATAD2B	ATPase family AAA domain-containing protein 2B	1	GLS(0.029)VT(0.352)S(0.619)EQINPHSTGAR	67.56	0.029226	15718000.0	1422.4	1314.2	1406.9	1316.6	1419.6	1388.3	1602.0	1612.8	1448.2	1402.6	True	False	1359.87299913367	1531.349212419466	1111.6109164260765	1201.1757221533712	1606.3022826481656	1656.569326699789	1961.2892799608867	1556.0769098562578	1380.8734980964548	1148.5755485281143	1.1839647821828794	1.3332594572310648	0.9678169780390959	1.0457960067952548	1.3985168713600273	1.4422815537233598	1.707584043970164	1.354788469814068	1.2022487331077416	1.0	10.16563003898542	-7.773025868970442	24.905454068155674	1.3910457091127146	1.1352562998415154	0.22016894749594984	0.19244998108377254	278.14249994685696	597872.1227266728	0.06083813179505258	0.06956068851789614	1.6864525679968033e-08	7.773025868970442	-0.2557894092711992	
GLVAAYSGDS(ph)DNEEELVER	ddPTM_K562_Methotrexat_30min_R1	3	GLVAAYSGDSDNEEELVER	19	0	P52756	P52756	RBM5	RNA-binding protein 5	1	GLVAAYSGDS(1)DNEEELVER;GLVAAYS(0.005)GDS(0.995)DNEEELVER;GLVAAYSGDS(1)DNEEELVER	174.19	1.8809999999999998e-12	170826800.0	4696.2	4950.3	5496.6	4992.200000000001	5408.3	4733.9	4723.400000000001	6602.599999999999	5896.6	5971.1	True	False	4489.760671071105	5768.252934287088	4342.938775483382	4554.541576890522	6119.586246299015	5648.65917716929	5782.742687245472	6370.382815610691	5622.468353042084	4889.67592885799	0.9182123184428939	1.179680007062205	0.8881854009694461	0.9314608254527535	1.2515320719277765	1.1552215851017686	1.1826433431133467	1.3028231130848233	1.1498652333704338	1.0	12.255523136072219	-7.760148919152118	24.999997948965596	1.188347211764378	0.9871772040785618	0.4476532061660825	0.10483304013828348	30.788844645961156	596460.4262158123	0.03083091165823241	0.03762827922997604	1.7372050407021206e-08	7.760148919152118	-0.20117000768581628	
GLVAAYSGES(ph)DS(ph)EEEQERGGPER	ddPTM_K562_Methotrexat_30min_R1	1	GLVAAYSGESDSEEEQERGGPER	23	1	P98175-2;P98175;P98175-5;P98175-4;P98175-3	P98175-2	RBM10	RNA-binding protein 10	2	GLVAAY(0.009)S(0.013)GES(0.981)DS(0.997)EEEQERGGPER	77.899	0.0041147	12902000.0	1672.8	1595.4	1961.5	1650.3	1775.3	1393.4	1761.4	1916.2	1592.4	1865.7	True	False	1599.2657149541644	1859.0127328367207	1549.8079554835099	1505.6207612560438	2008.7830673325516	1662.6548295206264	2156.4387875924494	1848.8061598875006	1518.3696715707729	1527.8036509973635	1.046774377002012	1.216787727678973	1.0144025735714022	0.9854805362411337	1.3148175591943378	1.0882647311617766	1.4114633030132553	1.2101071748850605	0.9938251362205922	1.0	10.57724342886412	-6.227824343996006	21.535790545503154	1.1478119230896018	1.0467732169519748	0.030921924673055656	0.14117258788672116	8423.867361574157	5396226.59237642	0.03546759877501565	4.07304638639183	5.91800947300745e-07	6.227824343996006	-0.101038706137627	
GLVGEIIKR	ddPTM_K562_Methotrexat_30min_R1	2	GLVGEIIKR	9	1	F6XY72;J3KPD9;Q32Q12;P22392;P22392-2;C9K028;E5RHP0;E7ERL0;P15531;P15531-2	F6XY72	NME2;NME1-NME2;NME1	Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A	0	;	90.601	0.016772	18661800.0	6402.9	5285.8	7936.5	6952.200000000001	5345.8	5835.6	5271.2	6597.0	6825.4	7789.200000000001	False	True	6121.436182615983	6159.188606762151	6270.737108689715	6342.7114199868365	6048.866400803442	6963.247110054946	6453.40078185382	6364.979770784807	6508.088643769875	6378.500401108788	0.9596983299635572	0.9656170289950106	0.9831052307529305	0.9943891230114636	0.9483210818254327	1.0916746370109986	1.0117426316586908	0.9978802807127471	1.020316412089362	1.0	12.639001567871478	-8.215500668646436	24.9999841193688	1.0234042182706076	0.9720279859679036	0.4970084156987804	0.027172559805168514	392.7536607096098	213737.8846329006	0.009017947897938987	0.009017930868298786	6.08834608389585e-09	8.215500668646436	-0.05137623230270394	
GMSIYPGYMS(ph)PHAGYPAGGLLR	ddPTM_K562_Methotrexat_30min_R1	2	GMSIYPGYMSPHAGYPAGGLLR	22	0	H0Y760;Q9Y4B4	H0Y760	RAD54L2	Helicase ARIP4	1	GMSIY(0.001)PGY(0.012)MS(0.987)PHAGYPAGGLLR;GMS(0.006)IY(0.079)PGY(0.245)MS(0.669)PHAGY(0.001)PAGGLLR	59.646	0.008701	27649000.0	2042.45	1738.3600000000001	2100.7	2295.2	1751.05	1735.0	1944.12	2660.5	2075.33	2219.0	True	False	1952.6663435605774	2025.5944429322044	1659.7917777640625	2093.9833795278873	1981.343767280269	2070.2641949320277	2380.138398849911	2566.9287070142436	1978.8483612791827	1817.1175974503665	1.0745954726872944	1.1147294185991903	0.9134201221169995	1.1523653628504817	1.0903772931704208	1.1393121710102065	1.3098427983909957	1.4126376358998185	1.0890040160613401	1.0	10.827436073396767	-8.493926076840456	3.406293921343724	1.236962017013907	1.0684329653636098	0.18760788206139645	0.12198711999360999	0.3167650399138169	7.607378752155211	0.04663871717651977	0.03806016914047948	3.206815124053319e-09	8.493926076840456	-0.1685290516502973	
GNDPLTSS(ph)PGR	ddPTM_K562_Methotrexat_30min_R1	4	GNDPLTSSPGR	11	0	P49736;F8WDM3;C9JZ21;C9J013	P49736	MCM2	DNA replication licensing factor MCM2	1	GNDPLTS(0.01)S(0.989)PGR;GNDPLTS(0.006)S(0.994)PGR;GNDPLTS(0.003)S(0.997)PGR;GNDPLTS(0.002)S(0.998)PGR	184.98	1.6594000000000002e-07	1148444000.0	31074.5	29502.199999999997	37071.1	32633.6	30829.9	30219.5	30609.2	32880.6	32410.5	33565.7	True	False	29708.502187555696	34376.9370983424	29290.382716556072	29772.66295493259	34884.57223430171	36058.990685157565	37474.09227726514	31724.17066109852	30903.742929191478	27486.626471716885	1.08083479135299	1.250678657627028	1.065623049328924	1.0831690453380296	1.2691470985061462	1.3118740025176043	1.363357279068973	1.1541674891875862	1.1243192379752651	1.0	14.746442230336937	-6.237885817347237	22.314087157665917	1.1910732911728514	1.0808342447820471	0.059663698305396196	0.11118954225981878	4165.854772917506	3946363.253872427	0.02904689603431844	1.293681227507557	5.782480576685294e-07	6.237885817347237	-0.11023904639080429	
GNHVIRDEEVS(ph)SADISSSSEVISQHLVSYR	ddPTM_K562_Methotrexat_30min_R1	2	GNHVIRDEEVSSADISSSSEVISQHLVSYR	30	1	P12270;P12270-2	P12270	TPR	Nucleoprotein TPR	1	GNHVIRDEEVS(0.492)S(0.492)ADIS(0.01)S(0.004)S(0.001)SEVISQHLVSYR;GNHVIRDEEVS(0.237)S(0.237)ADIS(0.199)S(0.237)S(0.068)S(0.021)EVISQHLVSYR	86.70100000000001	1.9408e-05	31635000.0	1085.3	1012.52	1133.7	1301.78	882.83	1019.24	1054.51	1412.94	1098.56	1401.97	True	False	1037.5915115015273	1179.821720102692	895.751862927175	1187.6549685438367	998.937619181657	1216.1937049236415	1291.0107107437914	1363.2460993379839	1047.488185381053	1148.059647632939	0.9037784000516227	1.0276658730539305	0.7802311184562838	1.034488905687553	0.8701095115060087	1.0593471405699004	1.124515362425278	1.187434905624211	0.9123987482190115	1.0	10.164981884087487	-8.338109319034507	6.7959420863135565	1.073778903430081	0.9274891051616131	0.31397241101143447	0.09702222054470042	0.2872283402888366	21.565994256063906	0.03292540912423823	0.02900904982494086	4.5908243972215845e-09	8.338109319034507	-0.146289798268468	
GNIET(ph)TSEDGQVFSPK	ddPTM_K562_Methotrexat_30min_R1	1	GNIETTSEDGQVFSPK	16	0	Q5T200-2;Q5T200	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	1	GNIET(0.756)T(0.185)S(0.06)EDGQVFSPK	143.28	9.009700000000001e-07	19270000.0	1855.6	1348.9	2426.4	1828.4	1832.9	1655.9	1649.3	1634.9	1815.2	2381.3	True	False	1774.0300458327026	1571.7827976203162	1917.1317987179139	1668.1070107741318	2073.958476941269	1975.8792394166821	2019.1975090134144	1577.399640329858	1730.8117482009961	1950.0234947312106	0.9097480366908263	0.8060327487679677	0.98313266681034	0.8554291859976088	1.0635556353781992	1.0132591964944686	1.0354734260736376	0.8089131462220075	0.8875850741683343	1.0	10.929275790959029	-6.769882524628423	24.999596700474196	0.9542384177643037	0.8578903855392896	0.18949587993793315	0.08103434274044413	288.56107702817644	854418.2202636901	0.02230756034344597	0.04767176203877325	1.6987030844765906e-07	6.769882524628423	-0.09634803222501409	
GNIETTSEDGQVFS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	4	GNIETTSEDGQVFSPK	16	0	Q5T200-2;Q5T200	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	1	GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK	235.45	3.1805e-51	190100000.0	12549.2	9472.400000000001	16927.3	12455.9	9749.1	8548.4	8651.5	11418.0	11250.699999999999	13727.6	True	False	11997.55219398781	11037.553096729693	13374.491055241391	11363.910586032342	11031.277531533698	10200.257316401689	10591.81910460774	11016.422468215991	10727.657412673501	11241.39861683626	1.0672650799891623	0.9818665339559022	1.1897532959297783	1.0108982852909953	0.9813082791150326	0.9073832949153451	0.9422154187063838	0.9799868186968015	0.9542991738240357	1.0	13.456533921518078	-7.615800144722034	3.5180232722740166	0.9560203167332159	1.0734941943386616	0.4930400965275644	0.053144589940073615	0.19506994892720714	4.7355624855704965	0.01607198583047072	0.021481898176059198	2.4221434214325152e-08	7.615800144722034	0.1174738776054457	
GNLELRPGGAHPGT(ph)CSPSRPGS	ddPTM_K562_Methotrexat_30min_R1	1	GNLELRPGGAHPGTCSPSRPGS	22	2	Q5JTU8;B1AMJ5;A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8	Q5JTU8	CDK5RAP2	CDK5 regulatory subunit-associated protein 2	1	GNLELRPGGAHPGT(0.444)CS(0.444)PS(0.091)RPGS(0.021)	64.779	0.008600499999999999	303620000.0	864.72	721.68	748.18	814.99	709.78	562.78	678.32	878.8	831.11	757.39	True	False	826.7079441864926	840.9253535374226	591.1472424846555	743.5410920536042	803.1285109735245	671.5292701001996	830.4505270805674	847.8921058914184	792.4718775051404	620.2193317408445	1.3329283720745555	1.3558515681494412	0.9531261156039932	1.1988357247211525	1.2949104774262465	1.0827286989190377	1.3389626614018006	1.3670842917964798	1.2777284372623694	1.0	9.276634684077392														
GNLLIY(ph)NHQT(ph)S(ph)RK	ddPTM_K562_Methotrexat_30min_R1	1	GNLLIYNHQTSRK	13	1	D6RE75;D6R9P6;Q8NEZ3-2;Q8NEZ3	D6RE75	WDR19	WD repeat-containing protein 19	3	GNLLIY(1)NHQT(1)S(1)RK	69.86399999999999	0.02033	61584000.0	390.3	201.26	480.46	318.05	240.06	166.62	157.58	208.73	255.81	368.14	True	False	373.1428793320241	234.514794164923	379.6180118743852	290.1670503044808	271.63209775466265	198.81695686430788	192.92132630226993	201.38884759070976	243.9174489352671	301.46627865046327	1.2377599279177314	0.7779138523046303	1.2592387233947828	0.9625190970062579	0.9010364242748622	0.6594998211883834	0.6399433036620114	0.6680310928712898	0.8091035920408151	1.0	8.235852824256414	-7.905632665127668	2.3828906366001745	0.7292912601539333	1.0607422897288523	0.4425347377894293	0.159921127154059	0.2530668404294086	2.923779819934112	0.05233054982448042	0.060688269050760205	1.2427029659715315e-08	7.905632665127668	0.331451029574919	
GNPTVEVDLFTSK	ddPTM_K562_Methotrexat_30min_R1	2	GNPTVEVDLFTSK	13	0	P06733;A0A2R8Y6G6;K7EM90;K7ERS8;A0A2R8YEM5;A0A2R8Y879;A0A2R8YEG5;A0A2R8Y798	P06733	ENO1	Alpha-enolase;Enolase	0	;	128.31	3.3131e-05	3968200.0	1762.72	1467.3600000000001	2106.9300000000003	1937.41	1393.68	1250.6	1782.2199999999998	1645.68	1965.18	2393.75	False	True	1685.2329394213323	1709.8162991445956	1664.714185902049	1767.5602733230767	1576.9733483242446	1492.2607505371707	2181.9282025792063	1587.800501619696	1873.819210736908	1960.2186790882454	0.859716804762407	0.8722579360073647	0.8492492208452762	0.9017158606738817	0.8044884813860363	0.7612725898680164	1.113104484645603	0.8100119229341433	0.9559235562475487	1.0	10.936798892899438	-8.73166839931264	24.999999713338052	0.9539280781941419	0.8442643194045718	0.3867258831363618	0.07809827384706315	246.0177305897711	206591.77486920496	0.029208811145452537	0.022621939084785124	1.854947407159591e-09	8.73166839931264	-0.10966375878957013	
GNRGS(ph)GGGGGGGGQGSTNYGK	ddPTM_K562_Methotrexat_30min_R1	4	GNRGSGGGGGGGGQGSTNYGK	21	1	Q99729-3;Q99729-4	Q99729-3			1	GNRGS(1)GGGGGGGGQGSTNYGK;GNRGS(1)GGGGGGGGQGSTNYGK;GNRGS(1)GGGGGGGGQGSTNYGK;GNRGS(1)GGGGGGGGQGSTNYGK	122.22	1.6459e-06	22591500.0	5729.0	5327.719999999999	8385.3	6247.73	5137.87	4833.12	4534.34	5780.07	6341.49	7663.849999999999	True	False	5477.160019710907	6208.035174243981	6625.3401219045945	5700.0012111266005	5813.589961221144	5767.052037930761	5551.281169599151	5576.781661925134	6046.675514047566	6275.8525007751205	0.8727356194293018	0.9891939260008479	1.0556876728836935	0.9082433359328637	0.9263426698608862	0.9189272751739276	0.8845461503299387	0.888609421785543	0.9634827321548349	1.0	12.615595730196127														
GNRY(ph)IR	ddPTM_K562_Methotrexat_30min_R1	1	GNRYIR	6	1	Q9UPR3	Q9UPR3	SMG5	Protein SMG5	1	GNRY(1)IR	87.839	0.021112	8871100.0	606.12	600.57	589.4	647.02	686.85	469.9	696.66	728.49	773.38	810.53	True	False	579.475690547596	699.8039845554403	465.69299462757067	590.2967611633553	777.1828140581099	560.7015246101205	852.9037389372977	702.8685937879374	737.4257326044992	663.7351628037158	0.873052571299379	1.0543421891336364	0.7016247152861609	0.8893558669844374	1.1709230693386417	0.8447669432513325	1.2850061089644638	1.0589594060662935	1.1110240558741886	1.0	9.374463895915623	-7.732069638454353	16.363267012591116	1.0800356161063587	0.8793514785376773	0.3505616805588354	0.1325832877732278	5.592752445344381	3114.300408987257	0.03818623763157903	0.049219967223525625	1.853234436288049e-08	7.732069638454353	-0.20068413756868142	
GNS(ph)PPSSGEACREEK	ddPTM_K562_Methotrexat_30min_R1	1	GNSPPSSGEACREEK	15	1	P41227-2;P41227	P41227-2	NAA10	N-alpha-acetyltransferase 10	1	GNS(0.999)PPS(0.001)SGEACREEK	94.454	0.016006	39119000.0	1327.2	929.98	1995.0	1175.1	1179.9	966.05	862.43	1228.2	1200.3	1542.2	True	False	1268.8578771444081	1083.6433880428062	1576.2767632880966	1072.0808074604477	1335.0775312035578	1152.7254902098462	1055.8518812213904	1185.0035098496135	1144.498314987691	1262.8926357764558	1.004723474663612	0.8580645395691591	1.2481478778431272	0.8489089072891042	1.0571583786160264	0.9127660242480737	0.8360583087668637	0.9383248237258472	0.9062514758303478	1.0	10.302516278960313	-8.326874560404557	10.703234059825126	0.9095657490139963	1.000318713596492	0.12510132572575716	0.1105711633538974	1.5254806901092806	245.58284812056368	0.03731266569603594	0.03290193771501901	4.7111338094208556e-09	8.326874560404557	0.0907529645824956	
GNS(ph)RPGTPS(ph)AEGGSTSSTLR	ddPTM_K562_Methotrexat_30min_R1	1	GNSRPGTPSAEGGSTSSTLR	20	1	P35269;M0QXD6	P35269	GTF2F1	General transcription factor IIF subunit 1	2	GNS(0.872)RPGT(0.128)PS(0.986)AEGGS(0.01)T(0.002)S(0.001)STLR	140.95	2.4540999999999998e-08	5508700.0	1822.6	1625.8	2182.0	1745.9	1820.9	1774.4	1605.7	1727.3	2036.0	2283.7	True	False	1742.480686319619	1894.435816125071	1724.0280187942979	1592.8396576846196	2060.3802666061183	2117.2776873126154	1965.819099146814	1666.5498799570403	1941.3468043946832	1870.0998004945486	0.9317581264159375	1.013013217596241	0.9218909163769645	0.8517404564523201	1.1017488296941425	1.1321736341304889	1.051184059068373	0.8911555840583056	1.0380979688256708	1.0	10.868899548270509	-7.767492449788857	24.99959422411867	1.035879667453312	0.9350080201298759	0.35320742076133294	0.07020240894913836	194.89921971557004	804945.969282261	0.0238394224800835	0.027727085686185975	1.708077414733638e-08	7.767492449788857	-0.10087164732343601	
GNSRPGT(ph)PS(ph)AEGGSTSSTLR	ddPTM_K562_Methotrexat_30min_R1	2	GNSRPGTPSAEGGSTSSTLR	20	1	P35269;M0QXD6	P35269	GTF2F1	General transcription factor IIF subunit 1	2	GNS(0.018)RPGT(0.983)PS(0.963)AEGGS(0.019)T(0.014)S(0.003)STLR;GNS(0.151)RPGT(0.873)PS(0.954)AEGGS(0.017)T(0.004)S(0.001)STLR	180.03	6.3701e-12	35364000.0	9134.0	8981.4	13845.8	9588.1	10265.5	9269.9	8644.5	10706.900000000001	10000.2	10938.099999999999	True	False	8732.480296742788	10465.423692302686	10939.755794052295	8747.526159485591	11615.593182956287	11061.176980173137	10583.249176418149	10330.332258271312	9535.292884728738	8957.104097643916	0.9749222741577589	1.1683936658786314	1.2213496320680137	0.9766020428172256	1.2968022986370853	1.2349054850308905	1.1815480830687202	1.1533116223343447	1.0645508616157435	1.0	13.128816657651452	-9.92475306255721	2.8700279719669823	1.0011543060547294	1.1572432354061863	0.20118970857652918	0.09812471725064192	0.3709333640601504	6.409041108616018	0.09376696288942434	0.025351519600219398	1.1891781953942836e-10	9.92475306255721	0.1560889293514569	
GNSRPGT(ph)PSAEGGSTSSTLR	ddPTM_K562_Methotrexat_30min_R1	3	GNSRPGTPSAEGGSTSSTLR	20	1	P35269;M0QXD6	P35269	GTF2F1	General transcription factor IIF subunit 1	1	GNSRPGT(0.943)PS(0.049)AEGGS(0.001)T(0.001)S(0.004)S(0.001)T(0.001)LR;GNS(0.003)RPGT(0.711)PS(0.271)AEGGS(0.006)T(0.006)S(0.001)S(0.001)T(0.002)LR;GNSRPGT(0.938)PS(0.01)AEGGST(0.001)S(0.027)S(0.008)T(0.015)LR	167.73	1.6424e-11	75805000.0	4707.5	4901.700000000001	5561.9	4380.9	5005.6	3985.45	4482.5	4648.34	4022.88	5082.5	True	False	4500.563936601344	5711.622610345837	4394.533197860682	3996.83329878604	5663.924137801959	4755.581807315187	5487.814729977947	4484.855247495809	3835.8571868680156	4162.009999568045	1.0813438547885363	1.3723231349609009	1.0558680056791718	0.9603132378828624	1.3608626933596484	1.142616622211082	1.3185491458568097	1.077569551241172	0.9216357450525398	1.0	12.02306471593185	-9.52970704051494	6.0532046601080856	0.9700715199873864	1.1846188875363877	0.32556656669742867	0.1291830753369597	0.1801458991161206	27.155981625978047	0.08401706515132258	0.033322011931078824	2.953200678195005e-10	9.52970704051494	0.21454736754900128	
GNSRPGTPSAEGGS(ph)TSSTLR	ddPTM_K562_Methotrexat_30min_R1	1	GNSRPGTPSAEGGSTSSTLR	20	1	P35269;M0QXD6	P35269	GTF2F1	General transcription factor IIF subunit 1	1	GNSRPGT(0.126)PS(0.051)AEGGS(0.65)T(0.131)S(0.027)S(0.006)T(0.009)LR	133.21	2.1335000000000001e-07	7481000.0	1575.4	1492.3	2013.1	1495.3	1596.3	1675.6	1011.9	1534.5	1401.0	1662.6	True	False	1506.1473023306976	1738.8772102370795	1590.5778206392313	1364.2093706030203	1806.2414298332403	1999.3859856069753	1238.8443335782897	1480.5307652371207	1335.8678157941797	1361.4870290766016	1.1062516720061657	1.2771897000123713	1.1682651297221724	1.0019995354111195	1.3266681145381778	1.468531056783563	0.9099200411909237	1.0874365554854077	0.9811829178425611	1.0	10.410967522514966	-8.79330893324384	24.999999008391416	1.0019212364729877	1.2191293321467107	0.44856813300102194	0.12482862155650662	210.99376431919967	165511.59737945857	0.05482818877795639	0.03696879338137825	1.6095003177331118e-09	8.79330893324384	0.217208095673723	
GNT(ph)LSRDLIDY(ph)VR	ddPTM_K562_Methotrexat_30min_R1	1	GNTLSRDLIDYVR	13	1	D6RIC3;A0A0C4DGU5;A0A087X2G6;Q9Y3C1;Q9Y3C1-3;Q9Y3C1-2	D6RIC3	NOP16	Nucleolar protein 16	2	GNT(0.612)LS(0.39)RDLIDY(0.998)VR	71.87899999999999	0.02389	0.0	0.0	0.0	123.77	72.654	130.28	70.665	69.313	0.0	176.59	0.0	True	False	0.0	0.0	97.79236841712662	66.28453662261204	147.41410353860465	84.32001114401827	84.85820465788318	0.0	168.38036944403592	0.0											0.0														
GNVVPS(ph)PLPTR	ddPTM_K562_Methotrexat_30min_R1	1	GNVVPSPLPTR	11	0	Q9Y2V2;H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9	Q9Y2V2	CARHSP1	Calcium-regulated heat stable protein 1	1	GNVVPS(0.756)PLPT(0.244)R	81.789	0.028904000000000003	35207000.0	2776.1	2480.1	3014.3	2419.1	2652.8	2458.3	2389.7	3011.9	3017.7	2971.6	True	False	2654.065968008284	2889.894370507928	2381.6396228467725	2207.021258895048	3001.6896980903475	2933.331683228472	2925.651056381104	2905.969769838829	2877.4077856688773	2433.4144446072587	1.0906756857180724	1.187588237142376	0.9787233852107579	0.9069648056812002	1.2335299910553486	1.2054385925624342	1.202282275781136	1.1941943454304753	1.1824569349645975	1.0	11.24876633706333	-7.788843120300804	24.999933043773098	1.1827810946187483	1.0470118382941098	0.3172747603940308	0.0910786612657271	255.47904147347265	233067.38270931656	0.028955344771183108	0.03283969069357689	1.626136056937817e-08	7.788843120300804	-0.13576925632463843	
GNY(ph)DAFRGQGGY(ph)PGKPR	ddPTM_K562_Methotrexat_30min_R1	1	GNYDAFRGQGGYPGKPR	17	2	H7C3A1;Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5	H7C3A1	SRRT	Serrate RNA effector molecule homolog	2	GNY(1)DAFRGQGGY(1)PGKPR	47.062	0.030791000000000002	9836900.0	498.78	599.35	578.26	381.04	424.21	503.23	409.84	454.22	476.54	533.31	True	False	476.85422842230884	698.3824002918939	456.8911283904634	347.634814802765	480.00105052280827	600.4720753980656	501.75705274604843	438.2448251456533	454.3857594136748	436.72239112043934	1.0918932441245082	1.5991449362148549	1.0461820545044185	0.7960086816498818	1.0990987874272595	1.3749514282002255	1.1489153360301918	1.0034860452685013	1.0404453003838867	1.0	8.77057269096454	-6.803203783559849	24.99957004060486	1.069632775772339	1.3455200349782004	0.28739146896199597	0.17734764222271115	164.53791402978516	98489.4192590004	0.04796989259934093	0.09985870206150739	1.5732444793304075e-07	6.803203783559849	0.27588725920586143	
GPAADPSS(ph)PGTSGVGPAAGAGDSR	ddPTM_K562_Methotrexat_30min_R1	4	GPAADPSSPGTSGVGPAAGAGDSR	24	0	A0A0U1RRM4	A0A0U1RRM4			1	GPAADPS(0.102)S(0.894)PGT(0.003)S(0.001)GVGPAAGAGDSR;GPAADPS(0.318)S(0.681)PGTSGVGPAAGAGDSR;GPAADPS(0.099)S(0.896)PGT(0.003)S(0.001)GVGPAAGAGDSR;GPAADPS(0.031)S(0.969)PGTSGVGPAAGAGDSR	279.1	1.1859999999999997e-151	226339000.0	11259.7	9925.9	12053.0	11247.6	10840.400000000001	9933.900000000001	10558.7	11537.2	11085.099999999999	11083.099999999999	True	False	10764.737069984098	11565.986263547697	9523.240013990688	10261.540371025567	12266.102609762736	11853.485582729252	12926.75725363483	11131.430136652789	10569.75612052824	9075.843192565188	1.1860867185103452	1.2743704378919196	1.0492953450090456	1.1306431979159455	1.3515110772088887	1.3060478603728491	1.4243037235619345	1.2264899139918495	1.164603210552034	1.0	13.147815967794983	-6.000462297003348	14.793404495910911	1.2273694920391294	1.1455121308450644	0.0	0.12621301196830478	24143138.326574415	689036381.4396391	0.03255504506920836	33424084.09147811	9.989360881674865e-07	6.000462297003348	-0.08185736119406495	
GPAGEAGAS(ph)PPVRR	ddPTM_K562_Methotrexat_30min_R1	1	GPAGEAGASPPVRR	14	1	Q13425;A0A140TA73;Q13425-2	Q13425	SNTB2	Beta-2-syntrophin	1	GPAGEAGAS(1)PPVRR	73.833	0.030242	13552000.0	3904.3	3869.0	4249.4	3891.7	3636.7	3916.3	3211.2	4397.0	4155.0	4285.8	True	False	3732.6716468768177	4508.286488244496	3357.509011486935	3550.5207032540443	4114.9897938198	4673.069548479712	3931.393343202496	4242.355017756674	3961.8349569056522	3509.6000897488884	1.0635603919031955	1.2845584604960114	0.9566642710358388	1.011659622879735	1.1724953523448955	1.3315105507687828	1.1201827110403872	1.208785875675144	1.1288565237041355	1.0	11.77709093302504														
GPALTPIRDEEWGGHS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	GPALTPIRDEEWGGHSPR	18	1	S4R3V8;Q86X29-6;Q86X29-5;Q86X29-4;Q86X29;Q86X29-2;Q86X29-3	S4R3V8	LSR	Lipolysis-stimulated lipoprotein receptor	1	GPALTPIRDEEWGGHS(1)PR;GPALTPIRDEEWGGHS(1)PR;GPALTPIRDEEWGGHS(1)PR;GPALTPIRDEEWGGHS(1)PR	122.35	8.0968e-05	1000700000.0	11321.6	10453.0	11554.3	11642.9	11521.599999999999	11924.0	11616.3	14055.099999999999	12924.8	14650.9	True	False	10823.916020101067	12180.180579379616	9129.210328851954	10622.185033768399	13036.89234978804	14228.14424228789	14221.55097553661	13560.774166493484	12323.928869076817	11997.480039876327	0.9021824569930805	1.0152282428389996	0.760927319612866	0.8853680104874669	1.086635885740755	1.1859277277392792	1.1853781734387623	1.1303018735118706	1.0272097830640654	1.0	13.550443792403899	-7.8000809826597495	5.03391280002659	1.1198714643637064	0.8896993789580251	0.6225540470603041	0.08034950945748863	0.12287193744613881	7.275709611349861	0.02563242844815378	0.0301165748170427	1.584597685827565e-08	7.8000809826597495	-0.23017208540568135	
GPASQFYITPSTSLS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	GPASQFYITPSTSLSPR	17	0	H0YIQ2;P49750-3;P49750-1;P49750	H0YIQ2	YLPM1	YLP motif-containing protein 1	1	GPASQFYITPST(0.002)S(0.017)LS(0.981)PR;GPASQFYITPS(0.002)T(0.015)S(0.015)LS(0.969)PR	152.59	1.1359999999999998e-11	24443800.0	3511.3	3222.8	3942.0	3629.1	3450.9	2964.6000000000004	3456.2	4065.8	3583.1	3765.3	True	False	3356.9474563119084	3755.3129217664414	3114.628070617381	3310.942437541239	3904.753837130571	3537.4669926775146	4231.340829838208	3922.8035094826214	3416.522463077893	3083.3676834970115	1.0887275864890091	1.2179257575623745	1.0101383909832367	1.0738072060825787	1.26639254151551	1.1472738109084302	1.3723114672588186	1.2722464240896372	1.108048995053043	1.0	11.590291221959529	-7.753514899340162	24.995312336280378	1.2145325730240968	1.099990055425123	0.14747648660056567	0.1075154860970769	288.256878765271	909211.6800052591	0.03145090064764085	0.03987026735478888	1.7639452477712833e-08	7.753514899340162	-0.11454251759897383	
GPASTPTYS(ph)PAPTQPAPR	ddPTM_K562_Methotrexat_30min_R1	2	GPASTPTYSPAPTQPAPR	18	0	K7EJY5;Q6P1N0-2;Q6P1N0	K7EJY5	CC2D1A	Coiled-coil and C2 domain-containing protein 1A	1	GPAS(0.001)T(0.185)PT(0.185)YS(0.628)PAPTQPAPR;GPAST(0.009)PT(0.032)YS(0.945)PAPT(0.013)QPAPR	201.75	2.8623e-20	36285000.0	3418.9	3529.7	3427.3	3259.9	3118.8	3274.2	3200.7	3705.2	2958.1000000000004	4077.7000000000003	True	False	3268.6092496752694	4112.922930358384	2707.9565668257087	2974.1096283212605	3528.976866105312	3906.8928109777753	3918.5384509181067	3574.8860158726457	2820.5785766600757	3339.1890162791187	0.978863201136635	1.2317131226495954	0.8109623485295251	0.8906682472366693	1.0568365099732135	1.1700124766615496	1.1735000420205506	1.070585102683455	0.8446897024724481	1.0	11.705282044768847	-5.96758261395494	19.142942322517936	1.03323656087298	0.7519519486240862	0.009914600797522266	0.13642303633978875	16477.885542490225	118894.78508665467	0.03455591978936598	166830.31074838754	1.0775002659975247e-06	5.96758261395494	-0.2812846122488939	
GPDKLLPYPTLASPAS(ph)D	ddPTM_K562_Methotrexat_30min_R1	2	GPDKLLPYPTLASPASD	17	1	P0C1Z6-2;P0C1Z6	P0C1Z6-2	TFPT	TCF3 fusion partner	1	GPDKLLPYPTLASPAS(1)D;GPDKLLPYPTLAS(0.001)PAS(0.999)D	99.055	0.0044312	10375000.0	2382.8999999999996	1732.95	3126.4	2997.2	1886.4099999999999	1941.22	2031.5900000000001	2309.1	2505.4	3315.8999999999996	True	False	2278.1505692038963	2019.2905323864816	2470.2113647839114	2734.4401294531995	2134.5059798607535	2316.3332913463673	2487.2257729561416	2227.8876441896614	2388.9245008499206	2715.358378272047	0.8389870697854721	0.7436552569062662	0.9097183578234936	1.0070273417070255	0.7860862849415382	0.8530488313739255	0.9159843477231611	0.8204764652861056	0.8797823963001684	1.0	11.40692690495139	-15.999999999999948	0.30052097678412926	2.1459552672700712	0.8547396212162025	0.26501557462793746	0.06958006767929857	404.71120752394506	3.749022342174789	292.31131550589015	0.07351753432565833	1.0000000000001186e-16	15.999999999999948	-1.2912156460538688	
GPGAPAS(ph)PSASHPQGLDTTPKPH	ddPTM_K562_Methotrexat_30min_R1	1	GPGAPASPSASHPQGLDTTPKPH	23	1	E9PCM6;E7EQN5;P98171;P98171-2	E9PCM6	ARHGAP4	Rho GTPase-activating protein 4	1	GPGAPAS(0.957)PS(0.041)AS(0.002)HPQGLDTTPKPH	112.48	3.115e-06	14900000.0	1342.5	921.53	1792.3	1397.0	1357.1	1266.7	886.69	1617.5	1590.1	1524.4	True	False	1283.4853074641107	1073.7971691682478	1416.1207232286997	1274.5271789824242	1535.5824371525973	1511.4718476774624	1085.552803775604	1560.6116081922721	1516.1765980687558	1248.3163882619824	1.028173081386117	0.8601963246379263	1.1344245229371293	1.0209969130958336	1.2301227890555633	1.2108083029991046	0.8696135162392665	1.25017313148079	1.2145771795720093	1.0	10.285767919124561	-6.776176230058929	24.78488636187424	1.1204951628934068	0.9441847063731427	0.2427346436002239	0.12145172692506694	252.83012657106735	425218.819809482	0.031594769427571	0.06622148863935567	1.6742633477032972e-07	6.776176230058929	-0.1763104565202641	
GPGAPASPS(ph)ASHPQGLDTTPKPH	ddPTM_K562_Methotrexat_30min_R1	1	GPGAPASPSASHPQGLDTTPKPH	23	1	E9PCM6;E7EQN5;P98171;P98171-2	E9PCM6	ARHGAP4	Rho GTPase-activating protein 4	1	GPGAPAS(0.156)PS(0.674)AS(0.17)HPQGLDTTPKPH	82.51700000000001	0.00076707	17426000.0	1533.0	1251.5	2582.5	1871.3	1605.0	1671.9	1551.4	1802.8	1670.5	2158.0	True	False	1465.6111555623706	1458.2891031372412	2040.4685419506304	1707.2460343806792	1816.0856323262244	1994.9710129722519	1899.3409419046932	1739.3945021632323	1592.8388196175429	1767.165288552451	0.8293571433620144	0.8252137548105523	1.154656304743317	0.9660930109028715	1.0276829474247118	1.128910252988505	1.0747952974226378	0.9842851222977751	0.9013524823828418	1.0	10.787221270687771	-6.7379116468587625	24.977619861854006	1.0319675946577562	0.8272851628141878	0.5623055400756787	0.07141910406165199	167.53628724061826	177857.9415423101	0.018634598208211173	0.0492397006399587	1.8284721638283344e-07	6.7379116468587625	-0.20468243184356838	
GPGAPGLAHLQESQAGS(ph)DTDVEEGKAPQAVPLEK	ddPTM_K562_Methotrexat_30min_R1	1	GPGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEK	34	1	Q14676;Q14676-3;Q14676-2;Q14676-4	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	1	GPGAPGLAHLQES(0.057)QAGS(0.741)DT(0.202)DVEEGKAPQAVPLEK	75.512	1.2661e-06	55582000.0	1415.9	1057.8	2759.4	1751.6	1445.9	970.37	1172.7	1340.9	1602.3	2022.1	True	False	1353.6587313507903	1232.5834704742904	2180.239649432167	1598.0399475344395	1636.0611936327025	1157.880269069851	1435.7078268477724	1293.7397869706454	1527.8094227316315	1655.8780954503766	0.8174869485078932	0.744368485736291	1.3166667615342609	0.9650710109187078	0.9880323908673457	0.6992545358569546	0.8670371513413124	0.781301347318545	0.9226581515447173	1.0	10.693380751241598	-8.192582463690956	24.99990073588419	0.8411917770033975	0.9733881218418564	0.10809890079075024	0.15847300457197436	364.027989443023	132166.99973126067	0.05372524735189306	0.05372524432644009	6.41826340166223e-09	8.192582463690956	0.13219634483845888	
GPGAPGLAHLQESQAGSDT(ph)DVEEGKAPQAVPLEK	ddPTM_K562_Methotrexat_30min_R1	1	GPGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEK	34	1	Q14676;Q14676-3;Q14676-2;Q14676-4	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	1	GPGAPGLAHLQES(0.067)QAGS(0.466)DT(0.467)DVEEGKAPQAVPLEK	49.09	0.0041406	37881000.0	2611.5	1679.0	4370.0	2593.8	1840.7	1452.8	1460.9	2584.5	1937.0	2901.5	True	False	2496.7015869218067	1956.4262118796864	3452.796719583449	2366.4055811342946	2082.784313659114	1733.533038845676	1788.5440131678258	2493.6016700914543	1846.9492927860997	2376.0102338901474	1.0507958052158959	0.8234081587588565	1.4531910133780535	0.995957655140177	0.8765889489663745	0.7295983048050391	0.7527509720526386	1.0494911320347216	0.7773322128171826	1.0	11.21432533475311	-7.639860715441739	4.274004471666602	0.8548427695014075	1.1002431128494445	0.2862479631720368	0.1724332082341997	0.2816418987699949	9.110351572898246	0.052422146470371855	0.06847784419568398	2.2916024851799178e-08	7.639860715441739	0.24540034334803706	
GPGEPDS(ph)PTPLHPPT(ph)PPILSTDR	ddPTM_K562_Methotrexat_30min_R1	1	GPGEPDSPTPLHPPTPPILSTDR	23	0	Q03164-2;Q03164;Q03164-3	Q03164-2	KMT2A	Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180	2	GPGEPDS(0.678)PT(0.322)PLHPPT(0.642)PPILS(0.108)T(0.25)DR	66.014	0.008406499999999999	20632000.0	1962.4	1701.5	2384.6	2037.9	1951.3	1990.3	1741.6	2123.1	2118.8	2356.0	True	False	1876.1352457114128	1982.6439544450798	1884.1050474871147	1859.2404710438666	2207.930152248075	2374.897306728076	2132.19813357046	2048.4293696154646	2020.297450467317	1929.305569893223	0.9724406931636274	1.0276464160909506	0.9765716104740163	0.9636837730929092	1.1444170310306379	1.2309596487919299	1.1051635193736915	1.061744392169476	1.0471630217597567	1.0	10.913865945030215	-7.757897141583816	24.99993131596861	1.1083105242427678	0.987517522229013	0.45179700700823655	0.06043219132303173	86.06372004992318	607404.8707070899	0.01933979540723475	0.023977025659355708	1.7462356828541092e-08	7.757897141583816	-0.12079300201375476	
GPGEPDS(ph)PTPLHPPTPPILSTDR	ddPTM_K562_Methotrexat_30min_R1	2	GPGEPDSPTPLHPPTPPILSTDR	23	0	Q03164-2;Q03164;Q03164-3	Q03164-2	KMT2A	Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180	1	GPGEPDS(0.74)PT(0.258)PLHPPT(0.002)PPILSTDR;GPGEPDS(0.921)PT(0.079)PLHPPTPPILSTDR	73.058	0.0015602	145706000.0	1702.73	1634.13	2155.84	2093.94	1605.94	1629.26	1769.37	1709.9	1850.27	2142.89	True	False	1627.8800279913335	1904.1422070392807	1703.3586452967456	1910.3675312515786	1817.1492588024773	1944.0914364466596	2166.1962629740274	1649.7618478194538	1764.2513515556736	1754.7918559713462	0.9276769905512458	1.085110009235405	0.9706898510500949	1.088657623267869	1.0355354981953766	1.1078758029513014	1.2344462709937485	0.9401467428775169	1.005390665310041	1.0	10.777084200567122	-6.252825126238038	23.631078411310813	1.055653412139029	0.9276768470941364	0.1789754224251665	0.07952358800701818	912.7567498590818	2503799.485340262	0.020259926435823257	0.21939529050532341	5.586951145848547e-07	6.252825126238038	-0.12797656504489263	
GPGEPDSPT(ph)PLHPPT(ph)PPILSTDR	ddPTM_K562_Methotrexat_30min_R1	1	GPGEPDSPTPLHPPTPPILSTDR	23	0	Q03164-2;Q03164;Q03164-3	Q03164-2	KMT2A	Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180	2	GPGEPDS(0.469)PT(0.532)PLHPPT(0.716)PPILS(0.15)T(0.134)DR	60.382	0.0092409	36666000.0	673.86	499.46	910.9	751.04	720.49	634.98	554.98	679.49	637.28	873.13	True	False	644.2379212571816	581.9872756315832	719.7145381850257	685.1974892648243	815.2470636976458	757.6808982697054	679.4483923799575	655.5919515614015	607.6529918981553	714.9976961973139	0.9010349609285943	0.813970840363345	1.00659700305721	0.9583212546124543	1.1402093573636727	1.0596969784649661	0.9502805337605646	0.9169147747582134	0.8498670626911569	1.0	9.481794783148178	-6.768218036508861	24.996724113581767	0.9882530034495141	0.8575028915426149	0.3060121406091927	0.07683566585225314	181.37898907065045	668855.2490702358	0.022075601709895573	0.04766134755991339	1.705226069383275e-07	6.768218036508861	-0.1307501119068991	
GPGGS(ph)PGGLQK	ddPTM_K562_Methotrexat_30min_R1	2	GPGGSPGGLQK	11	0	Q96A00-2;Q96A00;K7EJB8;K7EMN0	Q96A00-2	PPP1R14A	Protein phosphatase 1 regulatory subunit 14A	1	GPGGS(1)PGGLQK;GPGGS(1)PGGLQK	119.74	0.0028148	191567000.0	7779.6	6815.1	12349.2	8039.1	7145.700000000001	7067.6	5930.4	9681.099999999999	8988.9	10321.6	True	False	7437.618099030016	7941.179438106767	9757.27168180319	7334.32458450795	8085.4847993230505	8433.313673833773	7260.443162222248	9340.610225700284	8571.0080009938	8452.258221651056	0.879956326934976	0.9395334631122455	1.1543982005671867	0.8677355083308458	0.9566064579772906	0.9977586406708735	0.8589944807441058	1.1051023265916855	1.0140494736706644	1.0	13.04512112782287	-9.27734591897923	24.979906181076956	1.0446819156586242	0.9569608217515548	0.18655802541482813	0.08427545769921382	1479.0721101726624	2322747.620070205	0.04553095514434918	0.021983672042102234	5.280245085502636e-10	9.27734591897923	-0.08772109390706939	
GPGPREAVPS(ph)GRPR	ddPTM_K562_Methotrexat_30min_R1	1	GPGPREAVPSGRPR	14	2	Q86VX9;Q86VX9-4	Q86VX9	MON1A	Vacuolar fusion protein MON1 homolog A	1	GPGPREAVPS(1)GRPR	81.709	0.01936	9705600.0	2407.9	2520.4	2978.5	2643.7	2600.3	2449.4	2208.4	2538.1	2484.9	2464.8	True	False	2302.0515991380507	2936.8532605250525	2353.3535536108243	2411.9309256090432	2942.2850278740666	2922.7118841881875	2703.689916270674	2448.833584391226	2369.377541375416	2018.4008355996684	1.140532424747094	1.455039657498215	1.1659495537771323	1.1949712282458784	1.4577307817056624	1.4480334295540696	1.3395208070588247	1.2132543453211937	1.1738885059822481	1.0	10.978996993351744	-9.932101184309255	1.5282863280141736	1.006069041473271	1.3180103213100665	0.4194086275821257	0.11387569670170673	0.3784775061629343	1.9781217164979812	0.11145819462766775	0.03308659803859519	1.1692269463794517e-10	9.932101184309255	0.31194127983679554	
GPGQPS(ph)SPQRLDR	ddPTM_K562_Methotrexat_30min_R1	1	GPGQPSSPQRLDR	13	1	O95400	O95400	CD2BP2	CD2 antigen cytoplasmic tail-binding protein 2	1	GPGQPS(0.5)S(0.5)PQRLDR	79.23	0.027551	8569500.0	909.79	721.8	1294.9	1138.5	999.66	850.73	914.29	939.79	1001.6	956.53	True	False	869.7967209517865	841.0651814977712	1023.1181858555166	1038.6894726352823	1131.1328119696152	1015.1215323080819	1119.3428063517085	906.7370530219572	955.0358346177384	783.2931480347903	1.1104357584820264	1.073755315756209	1.3061753296609642	1.3260545879167431	1.4440734159458974	1.2959663120441274	1.4290215727790234	1.157596048550758	1.2192572308513543	1.0	9.613408528027314	-10.169460072876044	1.443844911989756	1.002815662085374	1.280386244323626	0.32654655486215245	0.11646033456498783	0.8568697696827146	3.5506573218062063	0.12213281411012866	0.03603465387773416	6.769240234756428e-11	10.169460072876044	0.27757058223825193	
GPGQVPTATSALSLELQEVEPLGLPQAS(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	2	GPGQVPTATSALSLELQEVEPLGLPQASPSR	31	0	Q6P2E9-2;Q6P2E9	Q6P2E9-2	EDC4	Enhancer of mRNA-decapping protein 4	1	GPGQVPTATSALSLELQEVEPLGLPQAS(0.812)PS(0.188)R;GPGQVPTATSALSLELQEVEPLGLPQAS(0.601)PS(0.399)R	130.49	4.3169e-24	148881000.0	4913.1	3978.9	4556.0	4758.3	4423.8	4066.8	4518.4	5525.700000000001	6054.9	6321.9	True	False	4697.126006779833	4636.345595263899	3599.757861423841	4341.147226737345	5005.607240052802	4852.651543486782	5531.766218835994	5331.357999003426	5773.409020593989	5176.9426495364905	0.9073166006968192	0.895576000958598	0.6953443576868945	0.8385542434251271	0.9669041322103444	0.9373585670146949	1.0685392119094215	1.0298275178846652	1.1152159510808763	1.0	12.337884620692183	-8.21929422903616	1.3526739906539567	1.0550897704249502	0.8306799713740978	0.662304218212132	0.06689489441508353	0.26469563825828046	0.9812401065860001	0.032408323057418024	0.030298821458557616	6.0353960036584995e-09	8.21929422903616	-0.22440979905085245	
GPGQVPTATSALSLELQEVEPLGLPQAS(ph)PSRTR	ddPTM_K562_Methotrexat_30min_R1	3	GPGQVPTATSALSLELQEVEPLGLPQASPSRTR	33	1	Q6P2E9-2;Q6P2E9	Q6P2E9-2	EDC4	Enhancer of mRNA-decapping protein 4	1	GPGQVPTATSALS(0.001)LELQEVEPLGLPQAS(0.798)PS(0.185)RT(0.016)R;GPGQVPTATSALSLELQEVEPLGLPQAS(0.746)PS(0.232)RT(0.02)R;GPGQVPTATSALSLELQEVEPLGLPQAS(0.79)PS(0.202)RT(0.008)R	108.23	1.4171999999999999e-14	26523300.0	2445.54	2021.13	1868.9299999999998	2515.16	1750.02	1616.0700000000002	2501.19	2524.19	2335.81	2717.01	True	False	2338.036989806914	2355.0873791640206	1476.6671334396092	2294.6598278378174	1980.1783042265038	1928.3526556217869	3062.14552693219	2435.4128069754884	2227.2187029337642	2224.9331606347987	1.050834708733383	1.058498035281243	0.6636905591439427	1.0313387693781888	0.8899945127616942	0.8667013866931652	1.3762865245167748	1.094600435673599	1.0010272408804917	1.0	11.119546281294332	-8.695798282581183	24.999999999980876	1.1258817326166775	0.9239403457229375	0.2908742381623163	0.1459513540594019	71.37185123914473	27181.899590730933	0.05578699287687733	0.043212405291098155	2.014659784676554e-09	8.695798282581183	-0.20194138689373997	
GPIAQWADGAIS(ph)PNGHRPQLR	ddPTM_K562_Methotrexat_30min_R1	1	GPIAQWADGAISPNGHRPQLR	21	1	A0A087WYF6;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2;Q5SRD0;A0A0A0MR88;A0A096LPC5;Q9Y4E1-5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1	A0A087WYF6;A0A0A0MR88	FAM21A;FAM21D;FAM21C	WASH complex subunit FAM21A;Putative WASH complex subunit FAM21;WASH complex subunit FAM21C	1	GPIAQWADGAIS(1)PNGHRPQLR	97.352	7.3355e-05	47940000.0	1171.1	1199.7	1168.4	1194.5	958.57	1062.1	1162.2	1143.8	1240.2	1465.4	True	False	1119.6198462355455	1397.9300335866947	923.1688071307323	1089.780039580892	1084.6387567470088	1267.3357933356233	1422.852934563384	1103.5719056879884	1182.5433726966046	1200.001859983671	0.9330150923689241	1.1649398890146028	0.7693061468615509	0.908148625366065	0.9038642296452507	1.056111524154528	1.185708940970096	0.9196418293076689	0.9854512831444244	1.0	10.22882092665183	-8.265900781563658	24.261319381427857	1.0341307220708873	0.9377898110117446	0.15108427695753035	0.11051590986511542	532.1129385460447	2893644.537679068	0.03979845886398556	0.036319349317228994	5.421247294702924e-09	8.265900781563658	-0.09634091105914266	
GPKPEPPGS(ph)GSPAPPR	ddPTM_K562_Methotrexat_30min_R1	1	GPKPEPPGSGSPAPPR	16	1	Q9UKJ3-2;Q9UKJ3	Q9UKJ3-2	GPATCH8	G patch domain-containing protein 8	1	GPKPEPPGS(0.644)GS(0.356)PAPPR	102.84	0.0036288	24015000.0	2571.3	2002.2	3435.9	2614.5	2595.0	2265.6	1814.5	2438.5	2770.6	3370.5	True	False	2458.268730787686	2333.029518419005	2714.751544351664	2385.2908442731186	2936.287984976044	2703.3951354685873	2221.4478142877833	2352.736572845043	2641.7954107347286	2760.06978918723	0.8906545553370168	0.8452791764754697	0.9835807612499136	0.8642139606823224	1.0638455579924686	0.9794662243901695	0.804852045042652	0.8524192330433297	0.9571480478805827	1.0	11.43048903110082	-6.744010693455619	24.983203175083553	0.9314776694711075	0.8679668569491701	0.11902577478590881	0.07465342257826081	603.3524344436669	864864.2292964366	0.0199445754044119	0.0524960610358389	1.8029733464368203e-07	6.744010693455619	-0.06351081252193747	
GPLPPLRPLSST(ph)GYRPSPR	ddPTM_K562_Methotrexat_30min_R1	1	GPLPPLRPLSSTGYRPSPR	19	2	Q69YN4	Q69YN4	KIAA1429	Protein virilizer homolog	1	GPLPPLRPLS(0.005)S(0.15)T(0.425)GY(0.329)RPS(0.092)PR	73.597	0.011777	15289000.0	895.23	789.69	829.96	954.72	876.68	714.01	757.77	920.6	1033.5	1160.1	True	False	855.8767611181354	920.1728500650798	655.7627380744805	871.0211798984244	991.9787863848929	851.9823272757444	927.7192120324348	888.2219761989529	985.4528105805034	949.9946484011579	0.9009279816034511	0.9686084564936569	0.6902804549248039	0.9168695648595011	1.0441940784133832	0.8968285544656822	0.9765520401549497	0.9349757682254648	1.037324591500617	1.0	9.891775576116355	-7.521533475147729	24.97681130655439	0.9745020611194931	0.8546007644901092	0.3585007249408808	0.07694064295426425	56.76526618027264	1053940.4085962505	0.022395612323245797	0.029312931678647437	3.0093072044115296e-08	7.521533475147729	-0.11990129662938387	
GPPDFS(ph)SDEEREPT(ph)PVLGSGAAAAGR	ddPTM_K562_Methotrexat_30min_R1	1	GPPDFSSDEEREPTPVLGSGAAAAGR	26	1	G5E972;P42167;P42167-2;P42167-3;P42166	G5E972;P42166	TMPO	Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin	2	GPPDFS(0.457)S(0.549)DEEREPT(0.824)PVLGS(0.169)GAAAAGR	60.979	0.0069597999999999995	60799000.0	2990.8	2225.9	3549.8	3050.2	2295.0	2387.6	2542.9	2278.7	2470.5	2385.9	True	False	2859.3280130828043	2593.6921411691446	2804.7454908872605	2782.793701741007	2596.832726597311	2848.969908829803	3113.2100561876027	2198.556829420543	2355.64699423235	1953.7903901563009	1.4634773655806863	1.3275181177248254	1.4355406316963635	1.424305143356953	1.3291255498444579	1.4581758223316315	1.5934207025854752	1.1252777373138074	1.2056805101001142	1.0	10.932059982621965	-9.283765619619096	24.606672317983467	1.12410924210296	1.4257444276685218	0.7522681216655331	0.08469410046268225	351.62763939217893	387540.72894460685	0.04618791880079431	0.022216781526053945	5.202767041133533e-10	9.283765619619096	0.3016351855655619	
GPPDFS(ph)SDEEREPTPVLGSGAAAAGR	ddPTM_K562_Methotrexat_30min_R1	4	GPPDFSSDEEREPTPVLGSGAAAAGR	26	1	G5E972;P42167;P42167-2;P42167-3;P42166	G5E972;P42166	TMPO	Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin	1	GPPDFS(0.379)S(0.321)DEEREPT(0.197)PVLGS(0.103)GAAAAGR;GPPDFS(0.872)S(0.128)DEEREPTPVLGSGAAAAGR;GPPDFS(0.551)S(0.449)DEEREPTPVLGSGAAAAGR;GPPDFS(0.546)S(0.454)DEEREPT(0.001)PVLGSGAAAAGR	125.35	1.1122e-10	940694000.0	1326.58	1284.56	1655.1	1622.72	1173.9499999999998	1203.78	882.8599999999999	1144.1	953.37	979.1199999999999	True	False	1268.265131602042	1496.8117062133233	1307.7171282797635	1480.458657035331	1328.34500191238	1436.3934481701876	1080.8638287804415	1103.8613545179467	909.0480367906476	801.7918801332141	1.5817884453897504	1.8668332060991124	1.6309932298921412	1.846437577778113	1.656720446821788	1.791479165306011	1.3480603328146212	1.3767429951205605	1.1337705697887754	1.0	9.64708399694804	-9.311536307061404	0.9771406625888795	1.0200105160122692	1.744905302657685	0.8461669972554328	0.11127705690227443	0.18574021591146703	0.3171207407745791	0.09271610424659142	0.036965907627802816	4.88049298572681e-10	9.311536307061404	0.7248947866454158	
GPPDFSSDEEREPT(ph)PVLGSGAAAAGR	ddPTM_K562_Methotrexat_30min_R1	5	GPPDFSSDEEREPTPVLGSGAAAAGR	26	1	G5E972;P42167;P42167-2;P42167-3;P42166	G5E972;P42166	TMPO	Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin	1	GPPDFS(0.003)S(0.002)DEEREPT(0.951)PVLGS(0.044)GAAAAGR;GPPDFSSDEEREPT(0.996)PVLGS(0.003)GAAAAGR;GPPDFS(0.003)S(0.002)DEEREPT(0.746)PVLGS(0.249)GAAAAGR;GPPDFS(0.04)S(0.034)DEEREPT(0.749)PVLGS(0.177)GAAAAGR;GPPDFS(0.001)S(0.001)DEEREPT(0.96)PVLGS(0.038)GAAAAGR	98.53299999999999	4.3395e-06	4891908000.0	10372.94	9927.99	11706.0	11114.259999999998	10778.48	10698.689999999999	10310.050000000001	12401.9	11694.060000000001	12415.0	True	False	9916.957977807664	11568.421600523769	9249.070571955117	10139.89008180186	12196.039044433368	12766.060426326978	12622.341161585977	11965.718147536165	11150.405703045042	10166.523196190317	0.9754522550564609	1.1378935922615887	0.9097574847830971	0.9973803124357756	1.1996273267741686	1.2556957949115564	1.2415592742970305	1.1769724926236391	1.096776694241293	1.0	13.31153876226396	-7.759429933642151	24.999881006050455	1.1793061274207906	1.0077929736494944	0.4261574836101999	0.08762563095196654	47.63253504705874	592598.230763065	0.0262248816185309	0.03217763347428284	1.740083409577256e-08	7.759429933642151	-0.17151315377129617	
GPPEDRDAEPQPGS(ph)PAAESLEEPDAAAGLSSTK	ddPTM_K562_Methotrexat_30min_R1	1	GPPEDRDAEPQPGSPAAESLEEPDAAAGLSSTK	33	1	Q9H9J4-2;Q9H9J4;C9JPC9	Q9H9J4-2	USP42	Ubiquitin carboxyl-terminal hydrolase 42	1	GPPEDRDAEPQPGS(0.91)PAAES(0.09)LEEPDAAAGLSSTK	65.73100000000001	6.0201e-05	18569000.0	887.21	518.85	755.91	772.41	618.1	694.35	604.52	788.89	790.03	707.06	True	False	848.2093107152583	604.5811435579366	597.2548211213556	704.6940145438899	699.3909840129836	828.5233105193386	740.0989984531553	761.1442915528913	753.3016777386696	579.0045824485155	1.4649440374518627	1.044173331066331	1.031520024583679	1.2170784755517035	1.2079196006625261	1.4309443062016007	1.2782264957617397	1.3145738645696667	1.301028870191459	1.0	9.177430956036883	-8.016275581619912	22.82920523748084	1.2892213883906551	1.173364857139418	0.03870385432324974	0.15112152561303235	516.8345052120948	724947.369276039	0.04782697620544813	0.0492284147402418	9.632176197955221e-09	8.016275581619912	-0.11585653125123718	
GPPLREGEELVMDEEAYVLYHR	ddPTM_K562_Methotrexat_30min_R1	1	GPPLREGEELVMDEEAYVLYHR	22	1	Q9BQ67	Q9BQ67	GRWD1	Glutamate-rich WD repeat-containing protein 1	0		122.49	3.8294e-06	2541900.0	909.37	1123.1	739.26	903.55	961.43	955.36	838.09	1240.1	1230.4	1281.5	False	True	869.395183648893	1308.6731855640717	584.099428585643	824.3371743518743	1087.874896876885	1139.969799003032	1026.053016630723	1196.4849801046284	1173.1989725575736	1049.4079320111066	0.8284625617254163	1.2470585990865382	0.5565990219516094	0.7855259610741628	1.0366558739384213	1.0862980583902875	0.9777446742415739	1.1401524074738605	1.117962745249344	1.0	10.035359884491333	-7.8577318564844045	6.257557242797923	1.0666058149562074	0.861880750872965	0.27322981394507806	0.16418558947228717	0.30889611821949403	16.843671973320937	0.0525504338231883	0.05996122040754061	1.3876123085570934e-08	7.8577318564844045	-0.20472506408324243	
GPPQS(ph)PVFEGVYNNSR	ddPTM_K562_Methotrexat_30min_R1	5	GPPQSPVFEGVYNNSR	16	0	Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;Q8WWM7-7;H3BSK9	Q8WWM7-6	ATXN2L	Ataxin-2-like protein	1	GPPQS(1)PVFEGVYNNSR;GPPQS(1)PVFEGVYNNSR;GPPQS(0.543)PVFEGVY(0.19)NNS(0.267)R;GPPQS(1)PVFEGVYNNSR;GPPQS(0.717)PVFEGVY(0.276)NNS(0.007)R	220.42	6.6553e-41	1271467000.0	6157.419999999999	5536.51	6027.83	5529.94	5971.799999999999	5518.84	5068.17	5716.12	6401.030000000001	6694.88	True	False	5886.747189486527	6451.324172920786	4762.670858170873	5045.138745985729	6757.196373287063	6585.277723088565	6204.836136091987	5515.080819672338	6103.44751244327	5482.372357286397	1.0737590965821011	1.1767395121104085	0.8687244404041621	0.9202473705166051	1.2325314540714019	1.2011730130545295	1.1317794071111191	1.0059661147135455	1.113285839538321	1.0	12.420584602568047	-7.754453879553064	24.99987017257505	1.1196563021793948	1.011705396502902	0.1952380277600989	0.10330126379972723	296.1874661392843	1059997.977263053	0.033185119377164486	0.04191469954449706	1.760135573680478e-08	7.754453879553064	-0.1079509056764929	
GPPQSPVFEGVY(ph)NNSR	ddPTM_K562_Methotrexat_30min_R1	1	GPPQSPVFEGVYNNSR	16	0	Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;Q8WWM7-7;H3BSK9	Q8WWM7-6	ATXN2L	Ataxin-2-like protein	1	GPPQS(0.002)PVFEGVY(0.991)NNS(0.007)R	115.92	0.00061355	431310000.0	1678.6	1508.9	1793.1	1536.2	1631.0	1602.2	1404.0	1655.5	1927.6	2102.3	True	False	1604.810753898888	1758.2200780853252	1416.7528141613457	1401.5237311043668	1845.5050880523795	1911.8024744208024	1718.8827397410012	1597.275126653668	1837.9862967343772	1721.5530982964883	0.9321877759604863	1.0212987794713504	0.8229504019151377	0.8141042715970845	1.0720000968187064	1.1105103155473797	0.9984488665739503	0.9278105498077313	1.067632650165192	1.0	10.749494963663231	-7.773770705651784	24.99884362270982	1.0282988646982378	0.9011337653579187	0.44885289833544595	0.07148161041639228	238.6734459742483	483852.05455316004	0.024154788881638776	0.027583589403222284	1.6835626966363478e-08	7.773770705651784	-0.12716509934031917	
GPPS(ph)PGPAAQPPAPPR	ddPTM_K562_Methotrexat_30min_R1	1	GPPSPGPAAQPPAPPR	16	0	H9KV50;Q9NZV5-2;Q9NZV5	H9KV50	SEPN1	Selenoprotein N	1	GPPS(1)PGPAAQPPAPPR	99.238	0.0025675	12171000.0	403.68	403.72	360.15	239.86	326.17	467.44	332.24	304.21	380.69	412.77	True	False	385.9347105527841	470.4278679333336	284.55943674095647	218.83184620667438	369.06707208463814	557.7661644259515	406.7532773871443	293.5107618721307	362.9918049926385	338.01335317692093	1.1417735628650756	1.391743443008611	0.8418585658419656	0.6474059209493263	1.0918712785037912	1.6501305619544826	1.2033645226265481	0.8683407300731786	1.0738978255768596	1.0	8.400936430902293														
GPPS(ph)PPAPVMHS(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	2	GPPSPPAPVMHSPSR	15	0	G3V4X8;G3V3A4;Q13573	G3V4X8	SNW1	SNW domain-containing protein 1	2	GPPS(1)PPAPVMHS(0.945)PS(0.055)R;GPPS(1)PPAPVMHS(0.89)PS(0.11)R	89.831	0.017643	381913000.0	3470.8999999999996	2986.6	3707.1	3760.8999999999996	3201.9	3214.6000000000004	3246.7	3218.3	3511.6000000000004	3661.0	True	False	3318.3233919383097	3480.084886479972	2929.030370518947	3431.187736173942	3623.00597267622	3835.7759544832825	3974.8551218782836	3105.1105648501966	3348.3464824716934	2997.9574241846744	1.1068614134307668	1.1608186488593704	0.977008661594161	1.1445084938479702	1.208491469374864	1.2794631183017755	1.3258544266882932	1.0357420488366886	1.1168759287441552	1.0	11.549764179504301	-6.2474769623419215	21.306193661122784	1.147417387982637	1.1068612406339386	0.0020354237378239493	0.10833703634597223	2256.436067879452	3442750.851434181	0.028575872704099274	0.4612059737795091	5.656177601481409e-07	6.2474769623419215	-0.04055614734869839	
GPPS(ph)PPAPVMHSPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	GPPSPPAPVMHSPSR	15	0	G3V4X8;G3V3A4;Q13573	G3V4X8	SNW1	SNW domain-containing protein 1	2	GPPS(1)PPAPVMHS(0.027)PS(0.973)R;GPPS(1)PPAPVMHS(0.346)PS(0.654)R	101.08	0.0059027	354690000.0	3906.2000000000003	3931.5	4906.9	4656.0	3947.6	4136.8	4030.7000000000003	3985.8	4510.1	4559.6	True	False	3734.488125151814	4581.1135509261385	3877.0087467560675	4247.815708906343	4466.778593252957	4936.178052792399	4934.687079112571	3845.6171548270563	4300.426435412802	3733.812256572644	1.00018101300567	1.2269265930181645	1.0383512829096735	1.137661836485993	1.196305086146222	1.3220209570267563	1.321621640302354	1.0299438993103098	1.151752187818963	1.0	11.866433672504431	-6.247036991385122	23.106961695348126	1.166239220203526	1.0001806766419314	0.15830548697688795	0.10797792660683826	1644.5514812382141	2638363.9372882373	0.027813813941295066	0.526196242569607	5.661910612010026e-07	6.247036991385122	-0.16605854356159466	
GPPS(ph)PPAPVMHSPS(ph)RK	ddPTM_K562_Methotrexat_30min_R1	3	GPPSPPAPVMHSPSRK	16	1	G3V4X8;G3V3A4;Q13573	G3V4X8	SNW1	SNW domain-containing protein 1	2	GPPS(0.701)PPAPVMHS(0.369)PS(0.931)RK;GPPS(0.992)PPAPVMHS(0.299)PS(0.71)RK;GPPS(0.998)PPAPVMHS(0.164)PS(0.838)RK	98.70299999999999	0.0043402	127319000.0	12062.7	8568.0	15344.3	12725.0	8277.7	8994.8	8464.7	9845.3	10292.599999999999	13055.599999999999	True	False	11532.43815146915	9983.71636890123	12123.741122266436	11609.419006837043	9366.362640938803	10732.91779860207	10363.124449491204	9499.035218630832	9814.099272550446	10691.104328649388	1.0786947537837794	0.9338339671934038	1.1340026950983868	1.085895212501744	0.876089349894321	1.0039110524663606	0.9693221701822438	0.88849897322355	0.9179687121985335	1.0	13.384123262278436	-7.750622489038682	24.98114052759874	0.9414551448393546	1.0546511946210448	0.45554824564457397	0.06179096616043761	205.32716572486777	474191.8616627421	0.01853505867461622	0.023684839076345363	1.7757323675501005e-08	7.750622489038682	0.11319604978169029	
GPPS(ph)PPAPVMHSPSR	ddPTM_K562_Methotrexat_30min_R1	2	GPPSPPAPVMHSPSR	15	0	G3V4X8;G3V3A4;Q13573	G3V4X8	SNW1	SNW domain-containing protein 1	1	GPPS(1)PPAPVMHSPSR;GPPS(1)PPAPVMHSPSR	126.14	0.0003111	120890000.0	8912.9	9222.4	12506.300000000001	9344.9	11682.1	11109.099999999999	9783.1	12944.599999999999	10875.8	13150.5	True	False	8521.099588005125	10746.244846003108	9881.398538701715	8525.64712589324	13218.50091302067	13255.77635038581	11977.209210228048	12489.331080930879	10370.186431844646	10768.817019049588	0.7912753622734656	0.9979039319726066	0.9175936893738591	0.7916976498729364	1.227479386977947	1.2309408105771409	1.1122121574766164	1.1597681582701027	0.9629828804315478	1.0	13.39457215454868	-7.760933930525239	24.999999897869213	1.1291535704897153	0.8864935291335412	0.5866893701896352	0.09847769979104809	9.745097570334432	481982.58382631186	0.029999469675842376	0.03640845400390299	1.7340677824396017e-08	7.760933930525239	-0.24266004135617414	
GPPSPPAPVMHS(ph)PS(ph)RK	ddPTM_K562_Methotrexat_30min_R1	1	GPPSPPAPVMHSPSRK	16	1	G3V4X8;G3V3A4;Q13573	G3V4X8	SNW1	SNW domain-containing protein 1	2	GPPSPPAPVMHS(1)PS(1)RK	66.779	0.018911	10627000.0	5014.1	4573.1	7015.5	5824.1	4638.8	4167.9	3812.9	4624.3	4975.6	6546.1	True	False	4793.686167713816	5328.727045590825	5543.042422480021	5313.510195498593	5248.883508557564	4973.2876876410355	4668.039884870697	4461.660747921811	4744.285442016791	5360.537856994069	0.8942546989868445	0.9940657426079474	1.0340459428428121	0.9912270628899453	0.9791710549547138	0.92775908319577	0.870815580339602	0.832315873322401	0.8850390704408079	1.0	12.388162047413802	-8.449971877299975	2.8382341328359613	0.8835827162707769	0.9834941333217904	0.3401703776678138	0.052116623601457794	0.2617219525268874	4.138730533699414	0.020512086571613405	0.016982694523562925	3.5483636588652754e-09	8.449971877299975	0.09991141705101347	
GPPVT(ph)PSSEKR	ddPTM_K562_Methotrexat_30min_R1	2	GPPVTPSSEKR	11	1	H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-4;Q7Z460-5;Q7Z460-3;Q7Z460	H0Y5T1;Q7Z460	CLASP1	CLIP-associating protein 1	1	GPPVT(1)PSSEKR;GPPVT(0.997)PS(0.001)S(0.001)EKR	89.62899999999999	0.016184999999999998	27853000.0	4163.6	3845.2	5270.2	4966.6	3493.1000000000004	3568.8	3960.9	3671.0	4602.8	5816.1	True	False	3980.5731293538747	4480.553942775324	4164.0570415443235	4531.185889143955	3952.5038768091804	4258.42009156969	4849.2326523077845	3541.8888492573915	4388.816832646293	4762.747930838702	0.835772370731556	0.940749753679766	0.8742971708794693	0.951380580064843	0.8298788712324651	0.8941099032339086	1.0181585762515575	0.743664980950121	0.9214883710785506	1.0	12.217578480529223	-9.027506650396052	0.00785738257431877	1.8053254031235217	0.00011989183930384796	0.08517619313543812	0.07585238134035709	7859.230012847259	48.78711365943793	5561.135956674983	5642.265639631578	9.386276632601744e-10	9.027506650396052	-1.8052055112842178	
GPQPPTVS(ph)PIR	ddPTM_K562_Methotrexat_30min_R1	2	GPQPPTVSPIR	11	0	P46087-2;P46087;P46087-4	P46087-2	NOP2	Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase	1	GPQPPT(0.002)VS(0.998)PIR;GPQPPT(0.012)VS(0.988)PIR	118.73	0.0027219	654950000.0	4917.6	4505.6	5100.700000000001	3895.6	4508.5	4045.2999999999997	3941.3	4636.3	5065.9	4152.1	True	False	4701.42819216798	5250.073817894649	4030.132775189773	3554.078796309182	5101.4467746684	4826.996972771483	4825.236853376927	4473.238701120146	4830.38741472644	3400.114455328378	1.3827264505170676	1.5440873790784213	1.1852932682528032	1.045282105353696	1.5003750143392482	1.4196572016000852	1.419139536851536	1.3156141535500538	1.4206543568427987	1.0	11.731367596129594	-12.30070021153506	5.274240020141646	0.9999268888033265	1.3567040311229852	0.3714134539159737	0.14015549170310404	0.00012739960058758413	1.6891532984532802e-05	0.1434692633037338	0.034789304295465374	5.003798222014657e-13	12.30070021153506	0.35677714231965874	
GPS(ph)PPLNGNILSCSPDRR	ddPTM_K562_Methotrexat_30min_R1	1	GPSPPLNGNILSCSPDRR	18	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	GPS(0.96)PPLNGNILS(0.004)CS(0.036)PDRR	71.143	0.019856	8161900.0	888.29	914.89	847.84	802.66	918.18	588.44	869.97	1000.1	865.57	757.27	True	False	849.2418352084134	1066.0600220289498	669.8899704191375	732.292044010044	1038.9367637939517	702.1477019399431	1065.0829181570355	964.9259161379235	825.3298396266731	620.1210649036681	1.3694774831432919	1.71911596358133	1.0802567568369907	1.1808856132371524	1.6753773135498051	1.132275198632411	1.7175402972683882	1.5560282834252999	1.3309172778300684	1.0	9.276406087025553	-10.024612025928047	21.698983825322173	0.9999999902759907	1.427664647844783	0.24205273375484226	0.22782523055641155	559.3607300292032	493157.19628813333	0.21814980823303912	0.05632603828154737	9.449046235801683e-11	10.024612025928047	0.42766465756879224	
GPS(ph)PSPVGSPASVAQSR	ddPTM_K562_Methotrexat_30min_R1	5	GPSPSPVGSPASVAQSR	17	0	O14497-2;O14497;A0A087WUV6;H0Y488;A0A1B0GTU5;O14497-3	O14497-2	ARID1A	AT-rich interactive domain-containing protein 1A	1	GPS(0.892)PS(0.095)PVGS(0.012)PAS(0.001)VAQSR;GPS(0.987)PS(0.011)PVGS(0.002)PASVAQSR;GPS(0.998)PS(0.001)PVGSPASVAQSR;GPS(0.642)PS(0.358)PVGSPASVAQSR;GPS(0.952)PS(0.048)PVGSPASVAQSR	195.28	1.5131999999999998e-11	933232000.0	4178.67	3524.55	4587.06	4300.68	4277.36	3563.9	3660.3900000000003	4609.45	4411.9400000000005	4724.25	True	False	3994.9806701981825	4106.92198039342	3624.2987918838553	3923.646061636458	4839.907813262864	4252.573235918301	4481.3256351286045	4447.333030838867	4206.829872387564	3868.6425460815212	1.0326569649720228	1.0615925176527998	0.9368399247831368	1.0142177817929052	1.2510610002376983	1.0992417069459304	1.1583715946224236	1.1495848938908793	1.0874175688959908	1.0	11.917611717806249	-7.577059157325047	24.737229058668692	1.132250636355836	1.0088264978634103	0.4061312160901237	0.06650016420885499	73.25923022886204	33447.50138469183	0.0187852873768149	0.024251707559194986	2.64813939832641e-08	7.577059157325047	-0.12342413849242573	
GPS(ph)PSS(ph)PTPPAAAAPAEQAPR	ddPTM_K562_Methotrexat_30min_R1	1	GPSPSSPTPPAAAAPAEQAPR	21	0	Q86VQ1	Q86VQ1	GLCCI1	Glucocorticoid-induced transcript 1 protein	2	GPS(1)PS(0.126)S(0.862)PT(0.011)PPAAAAPAEQAPR	153.06	1.9006e-20	23863000.0	1116.1	1201.6	1570.7	1299.1	1043.2	1104.4	1250.4	1353.7	1341.2	1336.9	True	False	1067.037580380405	1400.1439762922157	1241.0315348855202	1185.2099199828676	1180.399085135649	1317.8096696731584	1530.8340297522418	1306.0896037155353	1278.8479047417234	1094.7744551741303	0.9746643021650395	1.2789337289291378	1.1335956269532494	1.0826064806146332	1.0782121189956884	1.2037270904933137	1.3983099646846928	1.1930216288320266	1.1681382395228752	1.0	10.096417961869303	-8.35742755335017	6.682123544276152	1.2185924982516594	1.1190801977972042	0.09245442670364856	0.11532311530716335	0.5069405313231041	30.090982127831342	0.04026747170486807	0.03542951042318066	4.3910910933157945e-09	8.35742755335017	-0.09951230045445514	
GPS(ph)PSSPT(ph)PPAAAAPAEQAPR	ddPTM_K562_Methotrexat_30min_R1	1	GPSPSSPTPPAAAAPAEQAPR	21	0	Q86VQ1	Q86VQ1	GLCCI1	Glucocorticoid-induced transcript 1 protein	2	GPS(0.999)PS(0.036)S(0.444)PT(0.521)PPAAAAPAEQAPR	119.37	8.721299999999999e-05	21850000.0	1789.8	1594.0	1834.0	2200.4	1495.6	1581.5	1426.2	1831.9	1675.8	1763.6	True	False	1711.122535046008	1857.3814066326513	1449.0684630929159	2007.4943483413917	1692.2976147707786	1887.102492383286	1746.0616548565652	1767.4710386691966	1597.8924237743659	1444.1949503665908	1.1848279448779826	1.2861015794032367	1.003374553224333	1.390043877270042	1.1717930562914725	1.3066812703536104	1.209020745027082	1.2238451867045694	1.106424325447725	1.0	10.49604978792814	-9.972829162143142	2.5783599159062955	1.0005322513980197	1.2239355606201132	0.35754057317339294	0.09572063255244222	0.27088766544805726	4.124438008421329	0.08593291388743224	0.02338612649754767	1.0645617011256659e-10	9.972829162143142	0.2234033092220935	
GPS(ph)WDPFR	ddPTM_K562_Methotrexat_30min_R1	2	GPSWDPFR	8	0	F8WE04;P04792	F8WE04	HSPB1	Heat shock protein beta-1	1	GPS(1)WDPFR;GPS(1)WDPFR	89.88600000000001	0.021411000000000003	14157100.0	10326.4	7104.9	9638.8	15824.7	7861.0	8915.5	6211.0	11561.599999999999	9636.1	10083.5	True	False	9872.46382048224	8278.863962349005	7615.747601995638	14437.373120431763	8894.859287050744	10638.294195917282	7603.974855079311	11154.971974822736	9188.119814257172	8257.280438887228	1.1956071849017493	1.0026138779736886	0.9223070063273708	1.7484416603364605	1.077214144884903	1.2883532628753644	0.920881264885808	1.350925653716323	1.1127295339257468	1.0	13.011450988417229	-12.168908250842604	16.415100062195457	0.9999626595749954	1.1814105188377106	0.05074661283203319	0.23333459168837642	0.0	0.0	0.22150999107404415	0.05372406413693585	6.777846814425772e-13	12.168908250842604	0.18144785926271523	
GPS(ph)WDPFRDWYPHSR	ddPTM_K562_Methotrexat_30min_R1	1	GPSWDPFRDWYPHSR	15	1	F8WE04;P04792	F8WE04	HSPB1	Heat shock protein beta-1	1	GPS(0.999)WDPFRDWY(0.001)PHSR	72.583	0.029822	21302000.0	2837.0	2079.1	3283.5	2384.1	2522.7	2024.6	2234.8	3223.1	3009.0	3396.0	True	False	2712.288876927884	2422.635936342501	2594.3382216824375	2175.0896545540413	2854.4792677067676	2415.8252962878264	2736.010788299992	3109.741746129528	2869.1122467699433	2780.9514920871766	0.9753096681640572	0.8711536117173513	0.9328958915911615	0.7821386531706743	1.026439790779812	0.8687045794080668	0.983839810253772	1.1182294099619787	1.0317016513713442	1.0	11.441362864752794	-8.993031753553193	5.282777082752378	1.0561800955535559	0.9089655409691956	0.4673385873405419	0.06751807816458386	0.13836435542613923	12.083747132809108	0.028766713358383496	0.018093636795602854	1.0161743923013736e-09	8.993031753553193	-0.14721455458436028	
GPSPPLNGNILSCS(ph)PDRR	ddPTM_K562_Methotrexat_30min_R1	2	GPSPPLNGNILSCSPDRR	18	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	GPSPPLNGNILS(0.012)CS(0.988)PDRR;GPSPPLNGNILS(0.075)CS(0.925)PDRR	107.51	0.00062391	21436800.0	2115.85	1741.9699999999998	2461.62	1747.06	1821.49	1829.87	1576.37	1971.56	2170.16	2302.8	True	False	2022.839767447255	2029.800934072697	1944.9596020276902	1593.897962285635	2061.047861947597	2183.4664797580795	1929.9111000324224	1902.219117309153	2069.269735277586	1885.740605411763	1.072703086332256	1.0763945625647051	1.0314035750441914	0.8452371220683332	1.092964671828528	1.1578827297306387	1.023423420216915	1.0087384828274364	1.09732469531553	1.0	10.880915523228929	-6.762414662241314	23.842390860303816	1.0321132269424418	1.0745488446945684	0.045544456356247376	0.07768947717927538	52.55974194461238	1285200.7394397412	0.021442368161280707	0.04924854469210924	1.7281655272677832e-07	6.762414662241314	0.042435617752126564	
GPSPS(ph)PVGSPASVAQSR	ddPTM_K562_Methotrexat_30min_R1	2	GPSPSPVGSPASVAQSR	17	0	O14497-2;O14497;A0A087WUV6;H0Y488;A0A1B0GTU5;O14497-3	O14497-2	ARID1A	AT-rich interactive domain-containing protein 1A	1	GPS(0.166)PS(0.82)PVGS(0.014)PASVAQSR;GPS(0.022)PS(0.945)PVGS(0.03)PAS(0.002)VAQS(0.001)R	126.07	0.00011118	48061000.0	1816.1399999999999	1384.0300000000002	1852.46	1736.64	1446.74	1672.29	1350.37	1699.56	1808.5900000000001	1756.12	True	False	1736.304660184633	1612.7174330124146	1463.6539613637424	1584.3914675075425	1637.0116683561625	1995.4363749526674	1653.2248470541715	1639.785511480221	1724.5090456582411	1438.0696508492729	1.2073856500338722	1.1214459828562553	1.0177907311369518	1.1017487689639074	1.1383396258932255	1.3875797836177362	1.1496138911476474	1.1402684915239132	1.199183255581402	1.0	10.48991783700493	-4.448134183924641	12.390623872689535	1.1513017348945114	1.1889337532484372	0.0	0.10277267384056044	0.0	0.0	0.024269245745492298	0.0	3.56341017765644e-05	4.448134183924641	0.03763201835392582	
GPSPS(ph)SPTPPAAAAPAEQAPR	ddPTM_K562_Methotrexat_30min_R1	2	GPSPSSPTPPAAAAPAEQAPR	21	0	Q86VQ1	Q86VQ1	GLCCI1	Glucocorticoid-induced transcript 1 protein	1	GPS(0.041)PS(0.48)S(0.48)PTPPAAAAPAEQAPR;GPS(0.066)PS(0.466)S(0.466)PT(0.002)PPAAAAPAEQAPR	316.25	6.077899999999997e-262	90899000.0	3249.3	3230.6	3856.5	3452.5	3330.7	3357.6	3559.4	3439.6000000000004	3455.3	3919.8	True	False	3106.464662601965	3764.4017391891084	3047.073352190748	3149.8246853520536	3768.7454302734886	4006.4086806361784	4357.686056861909	3318.627318416159	3294.6638571831763	3209.8862363614003	0.9677802993178132	1.17275238497433	0.9492776777175722	0.9812885733055045	1.1741056077257084	1.2481466275196358	1.3575827104083318	1.033876927108178	1.026411409806809	1.0	11.648306451434694	-7.768415529147095	24.997374392048478	1.1579988224870994	1.023951915256241	0.19593529721843073	0.1177277162217864	260.53799315050134	933574.4406161448	0.03823171274463187	0.04427249975510951	1.7044508050201443e-08	7.768415529147095	-0.13404690723085833	
GPSQEEEDNHS(ph)DEEDRASEPK	ddPTM_K562_Methotrexat_30min_R1	3	GPSQEEEDNHSDEEDRASEPK	21	1	E7ERS3;Q86VM9;H3BPD0	E7ERS3	ZC3H18	Zinc finger CCCH domain-containing protein 18	1	GPSQEEEDNHS(1)DEEDRASEPK;GPSQEEEDNHS(1)DEEDRASEPK;GPSQEEEDNHS(1)DEEDRASEPK	87.958	0.00080854	84891000.0	7268.369999999999	6209.040000000001	11729.3	8018.02	6741.379999999999	6015.91	5741.97	7385.9	7571.92	9854.33	True	False	6948.861157700501	7234.9783243653665	9267.480220368452	7315.092635379139	7627.989632430752	7178.399465667736	7029.752938112991	7126.13371063203	7219.903091911686	8069.615346589937	0.8611142984203027	0.896570408083048	1.148441384419235	0.9064983052098456	0.9452730154795039	0.8895590628989756	0.87113854083313	0.8830822046113258	0.8947022604940739	1.0	12.978284191028461	-7.900016451310173	2.2838414225461885	0.8995287845476418	0.9644544016710876	0.06097264164997385	0.0797975134882529	0.7144556831600557	7.592162752845187	0.028322597158856187	0.03303833644307162	1.2588777239210055e-08	7.900016451310173	0.0649256171234458	
GPSTPKS(ph)PGASNFSTLPK	ddPTM_K562_Methotrexat_30min_R1	2	GPSTPKSPGASNFSTLPK	18	1	Q9Y4E8	Q9Y4E8	USP15	Ubiquitin carboxyl-terminal hydrolase 15	1	GPS(0.004)T(0.017)PKS(0.965)PGAS(0.014)NFSTLPK;GPST(0.001)PKS(0.582)PGAS(0.291)NFS(0.095)T(0.031)LPK	114.99	0.0012439999999999999	29176000.0	3870.7	2465.1	6000.5	4402.5	2835.9	2720.3999999999996	2524.3999999999996	3181.8	3317.0	5014.4	True	False	3700.5486626453167	2872.415875464334	4741.077051684322	4016.5396603222025	3208.8705574541673	3246.078798785638	3090.5609602579666	3069.894290538592	3162.793393996641	4106.243569470536	0.9012004767955033	0.6995239875248576	1.1546020033818019	0.9781542649307818	0.7814613291115419	0.7905227110539356	0.7526492055259321	0.747616218717008	0.7702400845170652	1.0	12.003603490784974	-7.770547609919113	24.964399735406168	0.7909128156379717	0.9324691573193835	0.1922250620455237	0.12419513709539186	293.832852234139	805352.9454701924	0.038903918345819626	0.04473716490796137	1.6961036551951812e-08	7.770547609919113	0.14155634168141185	
GPTSSPCEEEGDEGEEDRT(ph)S(ph)DLRDEASSVTR	ddPTM_K562_Methotrexat_30min_R1	1	GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR	31	2	E7ERS3;Q86VM9	E7ERS3	ZC3H18	Zinc finger CCCH domain-containing protein 18	2	GPT(0.014)S(0.043)S(0.117)PCEEEGDEGEEDRT(0.855)S(0.969)DLRDEAS(0.002)S(0.001)VTR	68.92699999999999	0.00026455	16350000.0	897.16	919.81	1018.5	623.61	850.15	782.45	720.52	776.3	865.17	1000.6	True	False	857.7219206290519	1071.7929684032483	804.7307686260283	568.939079516986	961.9596263689336	933.6473886596907	882.1149513092494	748.9970889889711	824.9484355393654	819.3816439877585	1.0467917202229469	1.308050987311672	0.9821195953445729	0.694351751337849	1.174006805531154	1.1394536300762423	1.0765617679890669	0.9141004005700682	1.0067938934102971	1.0	9.678391763305095	-6.787698941074426	24.985743387295237	0.998594159691388	1.1774214242332963	0.2117253167114862	0.13815261096416281	304.3248190164659	289561.79903388716	0.03773378577495578	0.078587025751332	1.6304258746900865e-07	6.787698941074426	0.17882726454190834	
GPTSSPCEEEGDEGEEDRT(ph)SDLRDEASSVTR	ddPTM_K562_Methotrexat_30min_R1	1	GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR	31	2	E7ERS3;Q86VM9	E7ERS3	ZC3H18	Zinc finger CCCH domain-containing protein 18	1	GPTSS(0.001)PCEEEGDEGEEDRT(0.491)S(0.491)DLRDEAS(0.015)S(0.002)VTR	59.555	0.00088345	13163000.0	706.95	391.18	459.13	439.82	318.89	437.68	573.93	600.16	508.91	532.4	True	False	675.8733244780285	455.8158460768888	362.7648873826885	401.26166346460246	360.8296244813145	522.2554656125931	702.6484122646384	579.0520326260735	485.2508851790265	435.9772009385196	1.5502492401508363	1.0455038591368149	0.832073068503976	0.9203730438215905	0.8276341600078252	1.1978962764299232	1.6116632033786649	1.3281704441873554	1.1130189471707153	1.0	8.768108882224285	-8.513950179356952	24.499301784902507	1.3068776799730102	1.0175490026774083	0.15697416492659488	0.24280977522472122	509.7471117393445	1398716.3716519151	0.0921513291647333	0.07529744818850034	3.0623147108629033e-09	8.513950179356952	-0.28932867729560185	
GPTSSPCEEEGDEGEEDRTSDLRDEAS(ph)SVTR	ddPTM_K562_Methotrexat_30min_R1	1	GPTSSPCEEEGDEGEEDRTSDLRDEASSVTR	31	2	E7ERS3;Q86VM9	E7ERS3	ZC3H18	Zinc finger CCCH domain-containing protein 18	1	GPTSSPCEEEGDEGEEDRT(0.091)S(0.251)DLRDEAS(0.323)S(0.323)VT(0.011)R	45.07899999999999	0.015002000000000001	23441000.0	1253.1	864.28	1086.8	895.37	908.38	1030.4	981.62	1130.7	1108.6	979.07	True	False	1198.0152244195733	1007.0875797518622	858.6955320007534	816.8743022516055	1027.847892020246	1229.510216978651	1201.7732727810262	1090.9326401131393	1057.061427972468	801.7509356177243	1.4942486141242102	1.2561102644375868	1.0710252945812342	1.0188629235863993	1.2820039819826603	1.5335313778353765	1.4989359156220967	1.3606877044335588	1.3184411529972646	1.0	9.647010322021645	-8.002133305336663	24.970078166279432	1.378330420976107	1.1967964795995103	0.0887981733115022	0.18031626615267315	150.06199498045444	1756495.4923792344	0.057305539767593484	0.06395512942325608	9.950999276502772e-09	8.002133305336663	-0.18153394137659662	
GPTSTSIDNIDGT(ph)PVRDER	ddPTM_K562_Methotrexat_30min_R1	3	GPTSTSIDNIDGTPVRDER	19	1	Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5	Q5VT52-2	RPRD2	Regulation of nuclear pre-mRNA domain-containing protein 2	1	GPTSTSIDNIDGT(1)PVRDER;GPTSTSIDNIDGT(1)PVRDER;GPTSTSIDNIDGT(1)PVRDER	148.33	1.1745999999999998e-11	406230000.0	4197.799999999999	3911.4300000000003	4896.6	4686.4	4244.93	3982.4	4462.81	4258.04	4776.7	4835.6	True	False	4013.2697383037953	4557.727324557808	3868.8705759982427	4275.550588105391	4803.21269983212	4751.942437981155	5463.70874625608	4108.282319719953	4554.632259603185	3959.8259820779604	1.0134964911255493	1.1509918226674427	0.9770304537392858	1.0797319395994647	1.2129858033083523	1.2000381985188964	1.3797850640368146	1.0374906216368853	1.1502102062609059	1.0	11.951221315898922	-7.651087450871961	5.566479897127624	1.1775715541677032	1.0533048420241111	0.19696442542144343	0.10566124179438753	0.3187795099888079	14.38767534688248	0.03141385041585359	0.04066090780295635	2.2331225091408006e-08	7.651087450871961	-0.12426671214359208	
GPVEGYEENEEFLR	ddPTM_K562_Methotrexat_30min_R1	1	GPVEGYEENEEFLR	14	0	F5GYQ2;Q9UI30-2;Q9UI30;F5GX77	F5GYQ2	TRMT112	Multifunctional methyltransferase subunit TRM112-like protein	0		202.0	1.2606e-11	10031000.0	859.4	669.14	860.85	860.97	749.02	628.56	892.72	1178.7	914.8	1012.9	False	True	821.6218050165045	779.7040115647252	680.169349211307	785.4900968421598	847.5292587694632	750.0203241305329	1092.9351847732103	1137.2444529064803	872.2711476720314	829.4539947983222	0.9905574150815657	0.9400208045948425	0.8200205839947602	0.9469965806037838	1.0217917619114438	0.9042337837108093	1.317656183015855	1.3710759849712892	1.0516208893347	1.0	9.696018154901722	-8.752616586384827	24.999988598861947	1.2160112689037759	0.9363496242261835	0.5191131084864384	0.11532191511581276	134.59675951639306	381389.92088254495	0.044010822159678276	0.03356947003841908	1.7675976423233649e-09	8.752616586384827	-0.27966164467759236	
GPVREGDVLTLLESER	ddPTM_K562_Methotrexat_30min_R1	2	GPVREGDVLTLLESER	16	1	P62857	P62857	RPS28	40S ribosomal protein S28	0	;	122.96	0.00092123	33653000.0	1614.3600000000001	2081.7	2176.5099999999998	2047.8200000000002	2083.5699999999997	1966.72	1932.63	1736.76	1829.8899999999999	1998.5900000000001	False	True	1543.3946673800847	2425.6655421500545	1719.6902947690091	1868.2908000456612	2357.5959756672587	2346.7608054505577	2366.0714738644233	1675.6771663950608	1744.8188133073616	1636.6259842669342	0.9430344392774571	1.4821135466919408	1.050753386113004	1.1415502491135705	1.440522146373752	1.433901714875743	1.445700787235281	1.0238607858506035	1.0661072414103754	1.0	10.676508947161667	-9.287292929826863	23.93591787296625	1.0337378793270018	1.2831373014023486	0.2945984087397291	0.17479160859838078	605.8544716956051	560911.2950822703	0.09683258912417779	0.046548298694477026	5.160681660167941e-10	9.287292929826863	0.24939942207534682	
GPVS(ph)PSVSFQPLAR	ddPTM_K562_Methotrexat_30min_R1	4	GPVSPSVSFQPLAR	14	0	Q7Z434-4;Q7Z434	Q7Z434-4	MAVS	Mitochondrial antiviral-signaling protein	1	GPVS(0.991)PS(0.009)VSFQPLAR;GPVS(0.934)PS(0.066)VSFQPLAR;GPVS(0.961)PS(0.039)VSFQPLAR;GPVS(0.582)PS(0.417)VS(0.001)FQPLAR	172.85	7.039e-08	180903000.0	4840.360000000001	4795.740000000001	5700.679999999999	4608.76	5133.0	4848.87	4189.6	5359.0	4946.8	5050.63	True	False	4627.583570083419	5588.154521357889	4504.185172401598	4204.717166361514	5808.079470860128	5785.845502524531	5129.224449016312	5170.520932489887	4716.824347730658	4135.911965394658	1.1188786436468177	1.351129948633869	1.0890428060578408	1.016636040985048	1.4043044241406883	1.3989285920336152	1.2401677047124646	1.250152560245925	1.1404556932537533	1.0	12.013989762278126	-10.047382309534086	2.9583400733719483	1.0003478146089237	1.2368244117401788	0.2559096748177965	0.12330524723632771	0.4207867749546101	9.005628134690868	0.12566404262452247	0.03364006757819839	8.966391353424297e-11	10.047382309534086	0.23647659713125502	
GPVSGS(ph)PDSMNASR	ddPTM_K562_Methotrexat_30min_R1	1	GPVSGSPDSMNASR	14	0	A0A499FJS7;O14920-4;O14920-2;O14920	A0A499FJS7	IKBKB	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	GPVS(0.002)GS(0.712)PDS(0.286)MNASR	110.25	0.0015298	11689000.0	3374.6	3017.2	3806.9	3382.2	3322.6	3392.5	3246.2	3213.5	3770.0	4067.2	True	False	3226.2566246319498	3515.741016368904	3007.883714366642	3085.687777204261	3759.5801382972636	4048.052611704265	3974.242984150452	3100.4793835708606	3594.733522872278	3330.590668026198	0.9686740119715523	1.0555908446270978	0.9031081913615037	0.9264686311731386	1.1288028199890734	1.2154158271581466	1.1932547047295068	0.9309097672480696	1.0793081111353198	1.0	11.701562341317352	-7.76394174313734	24.999827705939317	1.0991327086851639	0.9657302836777572	0.34009693016728004	0.08679107411053834	80.8784658170891	808017.036987141	0.028614497115108915	0.033961712876942045	1.7220995643111718e-08	7.76394174313734	-0.13340242500740673	
GPVSGSPDS(ph)MNASR	ddPTM_K562_Methotrexat_30min_R1	1	GPVSGSPDSMNASR	14	0	A0A499FJS7;O14920-4;O14920-2;O14920	A0A499FJS7	IKBKB	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	GPVS(0.001)GS(0.472)PDS(0.527)MNASR	119.21	0.00096135	14199000.0	1832.6	1869.4	2350.5	2074.7	1750.1	1842.6	1997.8	2371.6	2182.6	2176.7	True	False	1752.0410982932822	2178.286575633048	1857.1621714830421	1892.8142721795518	1980.2688256287365	2198.65637209323	2445.8575053095237	2288.1894837643235	2081.1314023928476	1782.4785373457476	0.982924092259877	1.2220548691019248	1.041898756463292	1.0619001758069428	1.1109636296532996	1.2334826624993782	1.3721665950332285	1.2837122219556258	1.1675492067869822	1.0	10.79966899008229	-8.223089469667475	4.322868103432438	1.239870974569087	1.0859034971160648	0.24539930024435253	0.10675807965666129	0.2608144323810136	11.22151364552262	0.03571094382541102	0.0346391863728518	5.982883280741243e-09	8.223089469667475	-0.1539674774530222	
GQDPERVTLQDYRLPDS(ph)DDDEDEETAIQR	ddPTM_K562_Methotrexat_30min_R1	1	GQDPERVTLQDYRLPDSDDDEDEETAIQR	29	2	H3BRF9;Q96K21-2;Q96K21;Q96K21-4	H3BRF9	ZFYVE19	Abscission/NoCut checkpoint regulator	1	GQDPERVT(0.021)LQDY(0.144)RLPDS(0.835)DDDEDEET(0.001)AIQR	53.39	0.0043496	14743000.0	829.17	435.51	743.17	1000.7	600.88	750.42	589.93	591.37	939.54	734.3	True	False	792.7206796201241	507.47062509572476	587.1887730189544	912.9701846869807	679.906252182044	895.4280444731356	722.236819555134	570.5711819082933	895.8609904719945	601.311154487519	1.3183202634844486	0.8439401486377348	0.9765140204648278	1.5182991000143347	1.1307062027836643	1.4891259505010919	1.2011033125947523	0.9488784261695186	1.4898459537733209	1.0	9.231967910947265	-5.938450715262394	20.5740589901359	1.1830037228869483	3.81688260233798	0.030978281438124533	0.2343620511848984	1757.973330119153	650562.7364103519	0.05644158720268509	22281.385204193157	1.152256813162368e-06	5.938450715262394	2.6338788794510317	
GQDVVQEWQET(ph)SPTREEPAGEQK	ddPTM_K562_Methotrexat_30min_R1	1	GQDVVQEWQETSPTREEPAGEQK	23	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	GQDVVQEWQET(0.555)S(0.435)PT(0.011)REEPAGEQK	75.646	0.009953700000000001	104310000.0	2577.3	2140.4	3195.7	2511.1	2340.4	2124.8	1803.5	2416.0	2621.6	3617.5	True	False	2464.004977971884	2494.0647194206554	2524.9662418244457	2290.9557617342616	2648.2036223652917	2535.3875281795786	2207.9807842755667	2331.0279105981635	2499.722388212721	2962.335695708292	0.8317777696638605	0.8419250806159315	0.8523565527980206	0.7733612922577622	0.8939579758640785	0.855874481697919	0.745351307576112	0.7868885062470331	0.8438349481573659	1.0	11.532519422618842	-10.039249649866377	22.312502846615295	1.0000000008433183	0.8230634046162417	0.6188822365912927	0.04148553003224032	1237.1675587196983	703300.0642755403	0.04199605006909185	0.010843333491276827	9.13587923560311e-11	10.039249649866377	-0.17693659622707658	
GQDVVQEWQETS(ph)PTREEPAGEQK	ddPTM_K562_Methotrexat_30min_R1	1	GQDVVQEWQETSPTREEPAGEQK	23	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	GQDVVQEWQET(0.226)S(0.741)PT(0.033)REEPAGEQK	83.46700000000001	0.00067624	14383000.0	1888.8	987.46	1985.2	1530.5	1269.1	922.46	1107.0	1605.0	1609.8	1724.2	True	False	1805.7706135852604	1150.6209810498608	1568.5336493631726	1396.3234412545455	1436.0088946948358	1100.7123396293932	1355.2729294111737	1548.5512402773406	1534.960749368644	1411.930672160397	1.2789371668102147	0.8149273924967534	1.110914069855255	0.9889461775896043	1.0170534028399543	0.7795795936249418	0.9598721496271971	1.0967615271845468	1.087136061022032	1.0	10.463453536595622	-12.854625543153201	17.59843450375649	0.999986141317518	1.0050128510696985	0.0	0.1381322087745247	7.282652884397414e-05	6.01577849570891e-07	0.12968083627761326	0.03136551138038619	1.3975728552376222e-13	12.854625543153201	0.005026709752180558	
GQDVVQEWQETSPT(ph)REEPAGEQK	ddPTM_K562_Methotrexat_30min_R1	1	GQDVVQEWQETSPTREEPAGEQK	23	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	GQDVVQEWQET(0.142)S(0.384)PT(0.474)REEPAGEQK	82.26700000000001	0.0058688	102380000.0	3051.0	2747.1	3749.1	3310.9	2654.1	2338.9	2183.9	3064.0	3290.9	3973.4	True	False	2916.881693164248	3201.011582283913	2962.2151444829096	3020.638537503869	3003.160670876655	2790.85932307004	2673.6951676071026	2956.2373833082675	3137.906777299833	3253.7787569667794	0.8964597506572354	0.9837828018976752	0.910392305604801	0.9283478574061849	0.9229762977726997	0.8577286691956032	0.821720026871022	0.9085551305473872	0.9643884884862411	1.0	11.667900441917684	-5.286598548826056	18.170128374836363	0.9143488076172089	0.9232159975544214	0.0	0.052044935411309105	0.0	0.0	0.01228494493072595	0.0	5.168939526049398e-06	5.286598548826056	0.008867189937212472	
GQDVVQEWQETSPT(ph)REEPAGEQKELAPAWEDTSPEQDNR	ddPTM_K562_Methotrexat_30min_R1	1	GQDVVQEWQETSPTREEPAGEQKELAPAWEDTSPEQDNR	39	2	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	GQDVVQEWQET(0.086)S(0.086)PT(0.819)REEPAGEQKELAPAWEDT(0.006)S(0.003)PEQDNR	47.428999999999995	0.0036497	21693000.0	452.99	253.6	480.16	542.66	378.77	397.4	284.91	414.24	450.44	599.13	True	False	433.0771019949108	295.5030895370393	379.38097777464264	495.08584033400285	428.5848940537093	474.19192568644814	348.8083200709465	399.67094440653284	429.4991427168668	490.62175131159927	0.8827107661597717	0.6023032789456618	0.773265711845078	1.0090988404213013	0.8735546129130144	0.9665122355842793	0.7109516019998356	0.814621331683881	0.8754180620175708	1.0	8.938467385785511	-14.776746233292641	0.022362550807653644	2.0149606208553936	3.5316920941732635e-06	0.16384028628936698	0.11254369739493904	4309.627945995576	8.94999796084028	528.6503993338362	305.0787908278483	1.672067350373553e-15	14.776746233292641	-2.0149570891632993	
GQEEISGALPVAS(ph)PASSR	ddPTM_K562_Methotrexat_30min_R1	1	GQEEISGALPVASPASSR	18	0	H0Y9D5;H0Y8S9;Q9UBK8;Q9UBK8-1	H0Y9D5	MTRR	Methionine synthase reductase	1	GQEEISGALPVAS(0.999)PAS(0.001)SR	121.26	0.00013515	10113000.0	827.59	929.74	1197.9	1152.2	859.89	796.44	1031.3	1132.1	965.02	1138.2	True	False	791.2101345282862	1083.3637321221079	946.4771602720851	1051.188414905905	972.9806070909639	950.3407581623424	1262.5952774180162	1092.2834013196111	920.1564308334757	932.0609506164967	0.848882397663965	1.1623314241472453	1.0154670246039736	1.1278108091650156	1.0439023396993528	1.0196122448148426	1.3546273734382852	1.171901258814821	0.9872277453795839	1.0	9.864280490445024														
GQGES(ph)DPLDHEPAVS(ph)PLLPR	ddPTM_K562_Methotrexat_30min_R1	3	GQGESDPLDHEPAVSPLLPR	20	0	P00519-2;P00519	P00519-2	ABL1	Tyrosine-protein kinase ABL1	2	GQGES(1)DPLDHEPAVS(1)PLLPR;GQGES(1)DPLDHEPAVS(1)PLLPR;GQGES(1)DPLDHEPAVS(1)PLLPR	102.75	0.00064275	31105300.0	5940.1	5405.1	7313.8	6690.8	5809.4	5582.4	5536.400000000001	6486.099999999999	6487.700000000001	7206.1	True	False	5678.980316474913	6298.200904008875	5778.733328990712	6104.227952137149	6573.437926751379	6661.119793538068	6778.078632693792	6257.9801866435255	6186.088243060601	5901.005461463308	0.9623750314351788	1.0673097907025275	0.9792794408900147	1.0344386210114516	1.1139521848741558	1.1288109860325852	1.1486311403977232	1.0604938815107783	1.048310882519773	1.0	12.526745078234796	-7.606075717164222	4.9892530271016895	1.0915820895836654	1.0089551608449976	0.35878240695306296	0.04782715743985881	0.2164030499524612	9.414286391777821	0.014314967372110859	0.018712196794001393	2.476990168605404e-08	7.606075717164222	-0.08262692873866784	
GQGESDPLDHEPAVS(ph)PLLPR	ddPTM_K562_Methotrexat_30min_R1	6	GQGESDPLDHEPAVSPLLPR	20	0	P00519-2;P00519	P00519-2	ABL1	Tyrosine-protein kinase ABL1	1	GQGESDPLDHEPAVS(1)PLLPR;GQGESDPLDHEPAVS(1)PLLPR;GQGESDPLDHEPAVS(1)PLLPR;GQGESDPLDHEPAVS(1)PLLPR;GQGESDPLDHEPAVS(1)PLLPR;GQGESDPLDHEPAVS(1)PLLPR	136.37	1.9295e-09	2357942000.0	11778.400000000001	9526.1	12315.8	10951.8	10720.300000000001	10777.199999999999	10171.400000000001	12322.300000000001	11080.800000000001	12927.699999999997	True	False	11260.635639057939	11100.126108985756	9730.881885365176	9991.672697766435	12130.207354658454	12859.741372692464	12452.595369659266	11888.917724653873	10565.656026589686	10586.368258025726	1.0636920391014206	1.0485301321886795	0.9191898154485614	0.9438244026880095	1.145832740653275	1.2147453271279554	1.1762858674615553	1.1230402565715263	0.9980434998168198	1.0	13.369920125181894	-7.7686820902769975	24.999545496101945	1.1243957408845349	0.9923877903616347	0.3448246479829663	0.07662168592666208	177.6104739488528	613054.0878761847	0.024918558023614833	0.028831177955230086	1.7034049687328665e-08	7.7686820902769975	-0.13200795052290015	
GQHHQQQQAAGGSESHPVPPT(ph)APLTPLLHGEGASQQPR	ddPTM_K562_Methotrexat_30min_R1	1	GQHHQQQQAAGGSESHPVPPTAPLTPLLHGEGASQQPR	38	0	Q7L2J0	Q7L2J0	MEPCE	7SK snRNA methylphosphate capping enzyme	1	GQHHQQQQAAGGS(0.005)ES(0.004)HPVPPT(0.613)APLT(0.377)PLLHGEGASQQPR	110.91	8.992700000000001e-19	81076000.0	750.29	547.48	524.41	681.39	450.13	550.47	538.84	545.73	472.85	794.81	True	False	717.3081499718791	637.9417644311443	414.3435074866721	621.6535966262235	509.329984846731	656.8405368208831	659.68858652567	526.5363665772913	450.867306708264	650.8622071336306	1.102089109046404	0.9801487280089785	0.6366071081487789	0.9551232039788566	0.7825465655623155	1.0091852463113211	1.0135610568493605	0.8089828550594987	0.6927231321263289	1.0	9.346208335121766	-9.318122912578044	24.197791280644918	0.8131394974892883	0.9154383253335017	0.0712699645026843	0.14277909509427542	540.2736745204896	230634.94058600088	0.07883855820735965	0.03787284809331783	4.807032821539746e-10	9.318122912578044	0.1022988278442134	
GQHHQQQQAAGGSESHPVPPTAPLT(ph)PLLHGEGASQQPR	ddPTM_K562_Methotrexat_30min_R1	3	GQHHQQQQAAGGSESHPVPPTAPLTPLLHGEGASQQPR	38	0	Q7L2J0	Q7L2J0	MEPCE	7SK snRNA methylphosphate capping enzyme	1	GQHHQQQQAAGGS(0.001)ESHPVPPT(0.014)APLT(0.985)PLLHGEGASQQPR;GQHHQQQQAAGGS(0.014)ES(0.014)HPVPPT(0.325)APLT(0.646)PLLHGEGASQQPR;GQHHQQQQAAGGSESHPVPPT(0.06)APLT(0.94)PLLHGEGASQQPR	138.82	6.2941e-37	560205000.0	2326.5699999999997	2415.74	2275.17	2468.8199999999997	2165.01	2083.0299999999997	2285.2999999999997	2312.62	2762.5700000000006	2568.17	True	False	2224.2967685562594	2814.899974440879	1797.6429090376828	2252.382383690328	2449.746763141806	2485.546066841072	2797.836698810619	2231.2838437945047	2634.138723682033	2103.0495269238886	1.0576530605105234	1.3384848708523795	0.8547791604637475	1.0710077698383391	1.1648545275702697	1.1818770956272522	1.3303712836962946	1.0609754146200177	1.2525329004186427	1.0	11.038267110673827	-7.814130078184145	5.785055107493596	1.1781451267797107	1.0828242794882814	0.07780942067718322	0.1387118714282336	0.49687505135122206	35.70026498395905	0.042692908632095905	0.049305578481891994	1.5341574091527193e-08	7.814130078184145	-0.09532084729142931	
GQLERS(ph)PSGSAFGSQENLR	ddPTM_K562_Methotrexat_30min_R1	1	GQLERSPSGSAFGSQENLR	19	1	Q96N67-4;Q96N67-3;Q96N67-2;Q96N67-6;A0A1B0GWE0	Q96N67-4	DOCK7	Dedicator of cytokinesis protein 7	1	GQLERS(0.997)PS(0.002)GSAFGSQENLR	137.99	1.6709e-08	10051000.0	603.29	629.11	687.51	769.84	761.01	750.51	481.69	572.23	691.78	611.81	True	False	576.770093959049	733.0597344583858	543.2110463800495	702.3493224537073	861.0961539293326	895.5354356993862	589.7212442349311	552.1043465569485	659.6192987937891	501.00528043988646	1.1512255788055574	1.4631776611511036	1.0842421578932384	1.4018800796611148	1.7187366831209514	1.7874770399886788	1.1770759057013358	1.1019930689596658	1.3165915102025239	1.0	8.968681998832517	-8.95842283823033	24.999937750959376	1.1534810491886969	1.435533812785447	0.2975714100265747	0.2151776296150542	205.36452403198416	123483.28377801733	0.0974410281678168	0.06569467354707324	1.1004673496568239e-09	8.95842283823033	0.28205276359675	
GQPEGPLPSS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	1	GQPEGPLPSSSPR	13	0	P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4	P49815	TSC2	Tuberin	1	GQPEGPLPS(0.023)S(0.488)S(0.488)PR	98.0	0.0071197000000000005	17239000.0	2967.7	3290.6	3708.5	2989.9	3365.5	3119.7	2917.1	3459.4	3087.8	3219.7	True	False	2837.243461423644	3834.3157193634897	2930.1365296510803	2727.7801091192196	3808.122240245422	3722.5378725818096	3571.3339316940696	3337.7309411934148	2944.2488519694994	2636.5811304691065	1.0761070192893458	1.4542756432005866	1.1113394144369622	1.0345898624533836	1.4443410051895016	1.4118806470861327	1.3545321592507376	1.2659314377326056	1.1166919227119143	1.0	11.364452675358441	-9.928896554956951	2.880438347541683	1.0023976737006814	1.2763823389574085	0.2688346341699793	0.1450408965783234	0.32300973473551936	5.659118798826973	0.14357865220500673	0.03878872653535183	1.1778865020901784e-10	9.928896554956951	0.27398466525672704	
GQPEGPLPSSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	GQPEGPLPSSSPR	13	0	P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4	P49815	TSC2	Tuberin	1	GQPEGPLPS(0.006)S(0.187)S(0.807)PR;GQPEGPLPS(0.004)S(0.229)S(0.767)PR	131.08	0.00034262	40665000.0	4365.4	4266.7	5056.9	4486.6	4360.5	4249.9	3690.5	4404.4	4692.6	4581.4	True	False	4173.502242982372	4971.699653500336	3995.525796627353	4093.266743895877	4933.982180534893	5071.133027113324	4518.188569098409	4249.494755562312	4474.442050246805	3751.6640653263203	1.1124402852469575	1.3251985164263094	1.0650009507927043	1.091053642496065	1.3151449848977175	1.3517023216395672	1.2043158690183569	1.1326959667943217	1.192655305041982	1.0	11.873314935280392	-10.510078365356687	1.0887519125773961	1.0003175528546226	1.2079346505852744	0.27661563624172025	0.09694007878212772	2.816545406118886	4.65491946404943	0.09925132912624872	0.03079043643771342	3.089737860943784e-11	10.510078365356687	0.20761709773065173	
GQPS(ph)PLAQVQQ	ddPTM_K562_Methotrexat_30min_R1	2	GQPSPLAQVQQ	11	0	P45983-5;P45983-3;P45983-2	P45983-5			1	GQPS(1)PLAQVQQ;GQPS(1)PLAQVQQ	97.551	0.0093839	18357500.0	4330.3	3839.0	4576.0	4497.200000000001	3740.8	4005.6000000000004	3990.3	4347.6	4202.9	4457.3	True	False	4139.945196954818	4473.329498157306	3615.560134740013	4102.937458353439	4232.780768477219	4779.625509636731	4885.226350704074	4194.69244375686	4007.508096360712	3650.0397778799083	1.1342192000327915	1.225556369348829	0.9905536253744822	1.1240802040619382	1.1596533260072552	1.309472170304109	1.3384035922867703	1.1492182822712436	1.0979354583057273	1.0	11.833696471130736	-5.987649036772352	15.932580634634762	1.1651699466482501	1.0855464929480991	0.0	0.10897029451244168	11511054.03859528	267658130.72144383	0.0286469826911306	20186839.79062255	1.0288473971988061e-06	5.987649036772352	-0.079623453700151	
GQS(ph)SPPPAPPICLR	ddPTM_K562_Methotrexat_30min_R1	1	GQSSPPPAPPICLR	14	0	O43379;O43379-4;H7C3R4;O43379-3;O43379-2	O43379	WDR62	WD repeat-containing protein 62	1	GQS(0.5)S(0.5)PPPAPPICLR	155.14	3.0150999999999996e-08	159810000.0	2907.7	3088.9	3198.1	2873.3	2625.7	2730.3	2860.2	3008.9	3083.5	3323.6	True	False	2779.8809895816735	3599.2882226772886	2526.8625146223876	2621.402250086039	2971.0255730834674	3257.891833673148	3501.6726582672427	2903.0752815392434	2940.1487580309467	2721.6638336575197	1.021390281637361	1.3224587761966067	0.9284256502856388	0.9631616578316567	1.0916210651522094	1.1970221279293762	1.286592640488412	1.066654612387575	1.0802762345854502	1.0	11.410273168011903	-8.009754171883165	24.44359638553795	1.1407515237291135	1.063248523294513	0.05594255050840102	0.12269118626208546	1029.538499270817	2579995.1272014985	0.04068423919976962	0.04357785844953425	9.777905330497035e-09	8.009754171883165	-0.07750300043460046	
GQS(ph)TGKGPPQSPVFEGVYNNSR	ddPTM_K562_Methotrexat_30min_R1	1	GQSTGKGPPQSPVFEGVYNNSR	22	1	Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;Q8WWM7-7	Q8WWM7-6	ATXN2L	Ataxin-2-like protein	1	GQS(0.399)T(0.399)GKGPPQS(0.2)PVFEGVY(0.001)NNSR	125.59	3.9207e-07	76735000.0	3016.7	2460.2	3552.1	3486.0	2146.7	2382.4	2605.1	2767.7	2662.3	3725.1	True	False	2884.0894800945894	2866.706233750094	2806.562752318619	3180.3877923641585	2429.028677205422	2842.765082424241	3189.3599895294037	2670.3584222527065	2538.5302540962502	3050.4482930429763	0.9454641426547717	0.939765555209726	0.9200492788943263	1.0425968535895296	0.7962858058421122	0.9319171509668303	1.0455381252661247	0.8753986842992474	0.8321826860287272	1.0	11.574805560984997	-7.724818540471671	24.99994490571309	0.9148404516370973	0.9573885603824825	0.08964401785588505	0.07495085783270374	540.9042375841018	369256.9490708241	0.022609615904727477	0.029188025561411084	1.8844362915088037e-08	7.724818540471671	0.04254810874538528	
GQSPAGDGS(ph)PEPPTPR	ddPTM_K562_Methotrexat_30min_R1	2	GQSPAGDGSPEPPTPR	16	0	A0A0A0MRW6;Q9H6R4-3;Q9H6R4-2;Q9H6R4-4;Q9H6R4	A0A0A0MRW6	NOL6	Nucleolar protein 6	1	GQSPAGDGS(0.999)PEPPTPR;GQS(0.02)PAGDGS(0.976)PEPPT(0.004)PR	154.31	9.036900000000001e-11	19386100.0	4523.2	4424.9	5537.0	5180.200000000001	4592.8	4665.1	4161.2	4765.3	4723.1	4761.0	True	False	4324.365543926757	5156.039514560108	4374.8593675820475	4726.05990877935	5196.833702272825	5566.564550880344	5094.455026075679	4597.701698002248	4503.52411190399	3898.73676496674	1.1091709455187206	1.3224897769172919	1.1221222748079966	1.212202873311881	1.3329532142232636	1.4277867130965	1.306693766004779	1.179279847594807	1.1551239243366587	1.0	11.928791034756093	-9.978604148878416	1.642107558350422	1.004528975147175	1.2634478663424797	0.4183373994247006	0.09342018910239887	0.3882671482684446	2.37443553204721	0.09476788947655382	0.027569276010779978	1.0504995026320276e-10	9.978604148878416	0.25891889119530465	
GQSQTS(ph)PDHRSDTSSPEVR	ddPTM_K562_Methotrexat_30min_R1	1	GQSQTSPDHRSDTSSPEVR	19	1	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	GQS(0.021)QT(0.334)S(0.639)PDHRS(0.004)DT(0.001)S(0.001)S(0.001)PEVR	64.298	0.025213	1286600.0	332.46	236.4	306.37	241.56	286.16	428.47	332.61	364.13	329.29	282.73	True	False	317.84545647636384	275.46108188705057	242.0671237937714	220.38280984609463	323.79505579219466	511.2657634596688	407.2062593057368	351.323341509151	313.9813797736372	231.52485729028487	1.3728351253353783	1.1897689306927361	1.0455340589639956	0.9518753728018915	1.3985325791010932	2.208254307737877	1.758801469836059	1.5174324935169416	1.3561454413508984	1.0	7.855023284185721	-7.99836905485594	23.652844965718057	1.63360674241955	1.1416092610838926	0.2914865123743363	0.30640600920650324	30.6394186252683	444320.48950545426	0.09677974225756311	0.10883774064103677	1.0037624502884498e-08	7.99836905485594	-0.49199748133565735	
GQSQTSPDHRS(ph)DTSSPEVR	ddPTM_K562_Methotrexat_30min_R1	1	GQSQTSPDHRSDTSSPEVR	19	1	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	GQS(0.007)QT(0.116)S(0.116)PDHRS(0.19)DT(0.19)S(0.19)S(0.19)PEVR	85.56299999999999	0.0031158	5725800.0	1534.0	1255.8	1524.5	1634.1	1409.5	1201.8	1642.4	1436.9	1473.7	1157.3	True	False	1466.5671967597368	1463.2996050497384	1204.528283525164	1490.840990103921	1594.8739556160817	1434.0308411926858	2010.7500083693865	1386.3634125573271	1405.1880086623003	947.7017555337127	1.547498659991209	1.54405074856663	1.2709993164957423	1.5731119852831035	1.682885935689656	1.5131668088818613	2.1217118113672817	1.4628688872445694	1.4827323052397927	1.0	9.888289300048152	-10.241111023596302	2.075671615973205	1.00111627961269	1.5944105660820196	0.42781613204455926	0.20435402049862855	0.9963000683437239	6.777160482982389	0.20381436501759237	0.05627978731553914	5.7396971309967794e-11	10.241111023596302	0.5932942864693296	
GQSS(ph)PPPAPPICLR	ddPTM_K562_Methotrexat_30min_R1	2	GQSSPPPAPPICLR	14	0	O43379;O43379-4;H7C3R4;O43379-3;O43379-2	O43379	WDR62	WD repeat-containing protein 62	1	GQS(0.171)S(0.829)PPPAPPICLR;GQS(0.247)S(0.753)PPPAPPICLR	126.1	0.00077448	38939000.0	2380.08	2236.26	2572.35	2537.56	2073.51	1929.05	2173.3999999999996	2423.21	2061.04	2175.83	True	False	2275.4545330273236	2605.7639550792555	2032.448888242674	2315.096054616063	2346.2129093362905	2301.8116110856636	2660.840275322715	2337.984330811497	1965.222700260127	1781.766102776219	1.2770781358349308	1.4624612910859303	1.1406934305663685	1.2993265788415482	1.316790630195844	1.2918708058813935	1.4933723742845857	1.3121724154301841	1.102963344738717	1.0	10.79909224749704	-9.86321610035689	3.3515422782438016	1.0059386399257275	1.327152564686802	0.5912885090772234	0.09260297005624303	0.15505109978383144	3.2071082855177053	0.08869287694762026	0.023894170464850557	1.3701997995303772e-10	9.86321610035689	0.3212139247610746	
GQSSLHPQFIPGPGPCRGTSGGCR	ddPTM_K562_Methotrexat_30min_R1	1	GQSSLHPQFIPGPGPCRGTSGGCR	24	1	A0A096LNT2	A0A096LNT2			0		39.935	0.030041	4532900.0	497.73	437.74	562.78	614.17	689.05	704.21	711.31	903.43	658.27	499.58	False	True	475.8503851650742	510.06909469220597	444.6601688437469	560.3266696604403	779.6721526195541	840.2886159729587	870.839374362658	871.6558548310011	627.6671713796107	409.10122097082194	1.1631605108287197	1.246804136838754	1.0869196816097038	1.369652890134992	1.9058172223718741	2.053987064567793	2.128664813798657	2.13066060463596	1.5342588562559618	1.0	8.676314032759475	-7.65729052830285	3.7241032629835242	1.8800597161685608	1.1799729915146422	0.4208109245131969	0.326671665693426	0.18982261017890062	5.014256580242349	0.0961446606319132	0.12567434171640976	2.201453272654634e-08	7.65729052830285	-0.7000867246539186	
GQSTGKGPPQS(ph)PVFEGVYNNSR	ddPTM_K562_Methotrexat_30min_R1	3	GQSTGKGPPQSPVFEGVYNNSR	22	1	Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;Q8WWM7-7	Q8WWM7-6	ATXN2L	Ataxin-2-like protein	1	GQSTGKGPPQS(0.999)PVFEGVY(0.001)NNSR;GQSTGKGPPQS(0.985)PVFEGVY(0.01)NNS(0.004)R;GQSTGKGPPQS(1)PVFEGVYNNSR	129.37	4.4982e-09	189231000.0	5828.4	4453.5	7397.4	8175.1	4711.8	4622.9	5235.2	5150.8	5177.6	7132.3	True	False	5572.190514729105	5189.365178443233	5844.786831452309	7458.401675661572	5331.48428809639	5516.209998127533	6409.326865450203	4969.643444498766	4936.894506107031	5840.571356599936	0.9540488720221599	0.8885030010940916	1.0007217572725329	1.2769986393939803	0.9128360844477535	0.9444641048506549	1.097380114739556	0.8508830970591589	0.8452759507044227	1.0	12.511893792982029	-9.277430021762225	24.73727793049353	0.8860596343742742	1.0095531301374712	0.16962663686161938	0.11248395984879431	1289.6753343078558	1995095.4684897242	0.06349318131670434	0.030661985202712176	5.279222644903813e-10	9.277430021762225	0.12349349576319701	
GQTPLTEGS(ph)EDLDGHS(ph)DPEESFAR	ddPTM_K562_Methotrexat_30min_R1	4	GQTPLTEGSEDLDGHSDPEESFAR	24	0	K7EQI9;Q86VR2-2;Q86VR2	K7EQI9	FAM134C	Protein FAM134C	2	GQT(0.048)PLT(0.45)EGS(0.508)EDLDGHS(0.945)DPEES(0.048)FAR;GQT(0.014)PLT(0.153)EGS(0.833)EDLDGHS(0.932)DPEES(0.068)FAR;GQT(0.042)PLT(0.251)EGS(0.707)EDLDGHS(0.966)DPEES(0.034)FAR;GQT(0.003)PLT(0.015)EGS(0.982)EDLDGHS(0.983)DPEES(0.017)FAR	124.9	1.9871e-09	161090000.0	3745.46	3259.26	4487.18	3671.09	3006.5699999999997	3863.51	3127.16	3962.7699999999995	3474.1899999999996	4359.95	True	False	3580.8140630871712	3797.797317052405	3545.3822389428965	3349.2512394349237	3401.9866539458285	4610.078628104803	3828.505233909166	3823.397132980581	3312.675665206271	3570.320806220697	1.0029390235320568	1.0637131852228427	0.9930150346057561	0.9380813157180173	0.9528518132091733	1.291222519856619	1.0723140697157032	1.0708833576856567	0.9278369774039572	1.0	11.801837996101277														
GQTPLTEGS(ph)EDLDGHSDPEESFAR	ddPTM_K562_Methotrexat_30min_R1	1	GQTPLTEGSEDLDGHSDPEESFAR	24	0	K7EQI9;Q86VR2-2;Q86VR2	K7EQI9	FAM134C	Protein FAM134C	1	GQTPLT(0.015)EGS(0.898)EDLDGHS(0.086)DPEES(0.001)FAR	160.05	6.5917e-27	31149000.0	1213.1	1043.7	1244.2	1072.7	1155.9	1006.8	1110.8	1262.6	984.96	1414.2	True	False	1159.7735765249267	1216.1536851333117	983.0594229990216	978.6580564741922	1307.921110533259	1201.3498509841863	1359.9251761426658	1218.193642351507	939.1694245857504	1158.074676121816	1.0014670041907832	1.0501513505208417	0.8488739485186836	0.8450733589577678	1.1293927218176048	1.0373682075557433	1.174298345506363	1.0519128580127652	0.8109748394903686	1.0	10.177512570283717	-7.763936732476122	24.999999191453167	1.0437710064287895	0.938265885102275	0.16371971064351043	0.10666501374154702	121.85120521346528	1219806.3446403467	0.03420623962008462	0.04060811905827976	1.722119433104441e-08	7.763936732476122	-0.10550512132651446	
GQTPLTEGSEDLDGHS(ph)DPEESFAR	ddPTM_K562_Methotrexat_30min_R1	1	GQTPLTEGSEDLDGHSDPEESFAR	24	0	K7EQI9;Q86VR2-2;Q86VR2	K7EQI9	FAM134C	Protein FAM134C	1	GQTPLTEGSEDLDGHS(0.999)DPEES(0.001)FAR	126.37	2.9901e-10	27612000.0	288.05	290.68	354.28	242.33	381.47	269.9	217.05	350.35	229.8	382.49	True	False	275.3876669013314	338.70992928480496	279.92146952266006	221.08530514159682	431.639991379118	322.0543551655067	265.7289876501311	338.0279919197295	219.11664815810332	313.2173545961203	0.8792222488962382	1.0813894067956618	0.8936971895558157	0.7058526671572091	1.3780845315410393	1.0282136364403605	0.8483852626645695	1.079212205069548	0.6995673928752907	1.0	8.291020340769313	-8.746157418324767	24.89285250046496	0.9133922138126083	0.9981092217317022	0.049669752867245065	0.1864449341793801	868.4283013757157	1414587.3918147348	0.07210844326887608	0.055640224584324285	1.7940832092569086e-09	8.746157418324767	0.08471700791909398	
GQVQEVGWHDVAGWLGR	ddPTM_K562_Methotrexat_30min_R1	1	GQVQEVGWHDVAGWLGR	17	0	P17858;P17858-2	P17858	PFKL	ATP-dependent 6-phosphofructokinase, liver type	0		90.654	0.009076700000000002	0.0	1115.3	969.3	1551.7	1483.1	1027.4	1156.5	1118.3	1243.5	1158.9	1919.0	False	True	1066.272747422513	1129.4603497170822	1226.019375235157	1353.0789256612968	1162.5211081943696	1379.977257313481	1369.1072420600872	1199.7654001774904	1105.0229919513747	1571.4505045098037	0.6785277324118616	0.718737463557215	0.7801832585351455	0.8610382075529477	0.7397758344014818	0.8781550887878262	0.8712379028998847	0.7634764166827791	0.7031866347556865	1.0	10.617881117395136	-15.999999999999998	0.22690955402945806	2.095130058204036	0.7584476041629229	0.4718048183050709	0.06932606834789862	157.54806869152253	1.577679263489197	79.6776322809269	0.13382191903118967	1.000000000000004e-16	15.999999999999998	-1.336682454041113	
GQVT(ph)T(ph)GQYRMLAKR	ddPTM_K562_Methotrexat_30min_R1	1	GQVTTGQYRMLAKR	14	2	A8MYV6;Q16665-2;Q16665;Q16665-3	A8MYV6	HIF1A	Hypoxia-inducible factor 1-alpha	2	GQVT(1)T(1)GQYRMLAKR	53.448	0.033616	81847000.0	1145.7	1187.7	973.53	1060.7	1120.9	1275.1	1144.2	1216.2	1050.8	1119.3	True	False	1095.3363998224447	1383.9472375518185	769.1993570746163	967.7100778429893	1268.3179970557408	1521.4950287941363	1400.815976361576	1173.4255566512775	1001.9485373565482	916.5839237612421	1.1950203046630843	1.5098969136101914	0.8392023219414249	1.0557790211636582	1.3837445368353642	1.659962595187809	1.528300835359698	1.280216165952458	1.0931334397018537	1.0	9.84012317185033	-7.775221826102774	24.770647709048397	1.365227662876526	1.153485352273799	0.0998563392024624	0.23780929948409496	425.8144588968513	765296.5245455744	0.07742518608485983	0.08825668240265454	1.6779467485101378e-08	7.775221826102774	-0.2117423106027272	
GRAEGEWEDQEALDYFS(ph)DKESGK	ddPTM_K562_Methotrexat_30min_R1	2	GRAEGEWEDQEALDYFSDKESGK	23	2	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	GRAEGEWEDQEALDY(0.452)FS(0.545)DKES(0.003)GK;GRAEGEWEDQEALDY(0.425)FS(0.52)DKES(0.055)GK	63.044	0.0052167	47582000.0	2756.8	1991.33	4878.7	2991.0	1939.89	1519.25	1804.26	3085.5	2512.87	4090.3	True	False	2635.614372899116	2320.3634356774123	3854.7275413802663	2728.7836738270785	2195.0195372544026	1812.8235608936486	2208.911233621866	2976.981216121951	2396.047222180386	3349.5070341826186	0.7868663495857641	0.6927477422789325	1.1508342875658228	0.8146821744152523	0.655326146460849	0.5412210042831072	0.6594735318001526	0.8887818970794982	0.7153432423721106	1.0	11.709733066300227	-7.529029422442585	23.675649392644058	0.7245418620671006	0.8791340761470642	0.11500495187140936	0.16206234386170523	156.01021720874454	600518.915907392	0.048832703111933884	0.0632565340603715	2.9578120748644522e-08	7.529029422442585	0.1545922140799636	
GRAS(ph)PGGVSTSSSDGK	ddPTM_K562_Methotrexat_30min_R1	2	GRASPGGVSTSSSDGK	16	1	P54259	P54259	ATN1	Atrophin-1	1	GRAS(1)PGGVSTSSSDGK;GRAS(0.963)PGGVS(0.016)T(0.016)S(0.004)S(0.001)SDGK	127.29	0.00034698	1973300.0	2007.81	1677.77	3137.5	1849.14	1776.52	1719.1599999999999	1388.25	1927.52	2197.0	2245.84	True	False	1919.5490764838123	1954.9929752861124	2478.9816264743877	1687.0287671750605	2010.1635187166235	2051.3633391120115	1699.6004013144186	1859.7280290712636	2094.8619495359126	1839.096613365448	1.0437456425799951	1.0630180932738384	1.347934419789934	0.9173138349093517	1.0930168127699023	1.1154190183397308	0.9241496009305574	1.011218233754485	1.139071180008552	1.0	10.844781555582154	-7.301557287630416	24.999957411352142	1.031015435548952	1.1427119146407918	0.22795928018384626	0.10325125038904423	821.2654373841897	511779.36556766246	0.02912552395516422	0.04320084264348017	4.99393301070832e-08	7.301557287630416	0.11169647909183977	
GRAS(ph)PGGVSTSSSDGKAEK	ddPTM_K562_Methotrexat_30min_R1	1	GRASPGGVSTSSSDGKAEK	19	2	P54259	P54259	ATN1	Atrophin-1	1	GRAS(1)PGGVSTSSSDGKAEK	82.59299999999999	0.017603	8724700.0	2112.8	1300.6	2801.3	2374.5	1290.8	1273.0	1032.7	1544.4	1411.1	2351.4	True	False	2019.9238417952877	1515.5020435799415	2213.345412029546	2166.331271649079	1460.5628250508978	1518.9892335149675	1264.3092630559336	1490.0825766257467	1345.4982689986919	1925.538674468135	1.0490175391326395	0.7870535469761716	1.1494681677276142	1.1250520700382478	0.7585216772934092	0.7888645674356746	0.6566002957095403	0.7738523231881238	0.6987646038168204	1.0	10.911046384635759	-7.776127231734738	24.85337392349892	0.7624563097086184	1.0191639660334628	0.4839998291482709	0.1246955779379875	183.81837172627996	311038.4770875657	0.038449711257154635	0.04378392058967354	1.67445225345655e-08	7.776127231734738	0.2567076563248444	
GRAS(ph)S(ph)HSSQTQGGGSVTK	ddPTM_K562_Methotrexat_30min_R1	1	GRASSHSSQTQGGGSVTK	18	1	P02545-3;P02545;P02545-5;P02545-4;P02545-6;A0A0C4DGC5;Q3BDU5;P02545-2;Q5TCI8	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	2	GRAS(0.93)S(0.678)HS(0.242)S(0.149)QT(0.001)QGGGSVTK	81.346	0.020449000000000002	1686000.0	1144.0	838.51	1153.9	1009.3	876.62	641.35	889.38	1179.4	1042.9	1368.1	True	False	1093.7111297869221	977.0595252669664	911.7121589765085	920.8162360393411	991.9108953332175	765.2818106165156	1088.846104751318	1137.9198335097165	994.4158066322273	1120.3238328399484	0.9762455262729127	0.872122413740127	0.8137934160209528	0.8219197066486853	0.8853787326998013	0.6830898247309224	0.9719030094996406	1.0157061736562039	0.8876146141704828	1.0	10.12970009239511														
GRASS(ph)HSSQTQGGGSVTK	ddPTM_K562_Methotrexat_30min_R1	3	GRASSHSSQTQGGGSVTK	18	1	P02545-3;P02545;P02545-5;P02545-4;P02545-6;A0A0C4DGC5;Q3BDU5;P02545-2;Q5TCI8	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	1	GRAS(0.173)S(0.773)HS(0.041)S(0.014)QTQGGGSVTK;GRAS(0.174)S(0.826)HSSQTQGGGSVTK;GRAS(0.033)S(0.965)HS(0.002)SQTQGGGSVTK	135.31	1.0022999999999999e-07	11080100.0	1289.95	1158.8899999999999	1692.96	1831.8999999999999	1567.52	1613.53	1210.33	2184.23	2194.32	2729.84	True	False	1233.2453425425176	1350.3768747380884	1337.6308316672755	1671.3001712082323	1773.6763553794399	1925.3218365698401	1481.7773122441065	2107.4093928666507	2092.3065421509527	2235.4395233095574	0.5516791349902876	0.6040766751492619	0.59837486888794	0.7476382849015215	0.7934351776842169	0.8612721643748208	0.6628572577308387	0.9427270882938678	0.9359709892993674	1.0	11.126342800973603	-5.9337383244325	0.19322291499976246	1.0497027594539095	0.01764749916277224	0.8031092697437507	0.06813576485885177	7.7973302604363255	0.2485091367450237	0.16669389025583664	1.9969216849289277	1.1648276619269267e-06	5.9337383244325	-1.0320552602911373	
GRDS(ph)PYQSRGS(ph)PHY(ph)FSPFRPY	ddPTM_K562_Methotrexat_30min_R1	1	GRDSPYQSRGSPHYFSPFRPY	21	3	Q13242	Q13242	SRSF9	Serine/arginine-rich splicing factor 9	3	GRDS(0.91)PY(0.189)QS(0.386)RGS(0.667)PHY(0.803)FS(0.04)PFRPY(0.005)	43.81	0.034032	17152000.0	682.39	600.92	1012.9	829.67	672.51	756.83	808.97	789.39	642.13	758.3	True	False	652.3929526707146	700.2118161064573	800.3061320975004	756.9341192457744	760.956852707607	903.0766862538359	990.4021153620216	761.6267062694887	612.2775164567577	620.964521922764	1.0506122807960674	1.1276196809735777	1.288811363360052	1.2189651622962163	1.2254433640610718	1.4543128542312458	1.5949415472164585	1.2265220948713402	0.9860104641097567	1.0	9.278367033891607	-6.621398287034831	2.9734149307710256	1.275991558968178	1.0578058707220295	0.11069973648677789	0.1740384011249119	0.5099573124127876	8.585964946479333	0.04839982082773386	0.17779363684384977	2.3911218771089296e-07	6.621398287034831	-0.2181856882461486	
GRECS(ph)PTSSLER	ddPTM_K562_Methotrexat_30min_R1	2	GRECSPTSSLER	12	1	A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6	A0A0J9YX88	PHRF1	PHD and RING finger domain-containing protein 1	1	GRECS(0.926)PT(0.073)SSLER;GRECS(0.49)PT(0.201)S(0.201)S(0.107)LER	112.62	0.0030144	25033000.0	3427.9	3443.5	3619.7	3967.7	3665.1000000000004	3160.0	2928.9	3426.3	3691.4	3854.6	True	False	3277.213620451567	4012.4798455078635	2859.97443612728	3619.857901251655	4147.124891612986	3770.6252772249027	3585.7803820708095	3305.795086954673	3519.7876197163714	3156.494588162318	1.0382446504872769	1.2711822350514126	0.9060603008327446	1.1467968026389372	1.3138387460462602	1.1945609827324704	1.1360008014961995	1.0472994629397658	1.1150938236727848	1.0	11.624107562251796	-9.853561506840503	1.1451144999915879	1.0106685829854436	1.1460252811505092	0.12151014605480093	0.11051572188604747	1.0107068016043104	2.8893801734609856	0.10704190593197457	0.03479795672068802	1.4010011544730883e-10	9.853561506840503	0.13535669816506557	
GREDVALEQDTYWR	ddPTM_K562_Methotrexat_30min_R1	1	GREDVALEQDTYWR	14	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	0		122.66	0.0029264	8886500.0	719.32	782.16	910.68	945.55	934.1	681.63	892.53	770.51	977.56	986.12	False	True	687.699554089449	911.3986455531957	719.5407131785482	862.6550995610811	1056.9505228385824	813.3453505426611	1092.7025724366351	743.4107265707748	932.113448970563	807.524112301828	0.8516148850703392	1.1286333518330194	0.8910454836172195	1.0682716298118993	1.3088779724803143	1.0072087485093661	1.3531516344718335	0.9206049890593365	1.1542855931739253	1.0	9.657361528440617	-5.1662033038993345	0.7000802077955667	1.1176641325287353	7.603905021623844e-11	0.1921554585266052	0.14454627949126056	20.055828721649718	2.3441484198906486	0.056043791184953645	25.21919298950062	6.820193494149505e-06	5.1662033038993345	-1.1176641324526964	
GREDVSNFDDEFTSEAPILT(ph)PPREPR	ddPTM_K562_Methotrexat_30min_R1	3	GREDVSNFDDEFTSEAPILTPPREPR	26	2	Q16513-4;Q16513-3;Q16513-2;Q16513;Q16513-5	Q16513-4	PKN2	Serine/threonine-protein kinase N2	1	GREDVSNFDDEFT(0.002)S(0.002)EAPILT(0.996)PPREPR;GREDVSNFDDEFTSEAPILT(0.999)PPREPR;GREDVSNFDDEFT(0.031)S(0.031)EAPILT(0.937)PPREPR	76.693	0.00056973	470130000.0	2548.6800000000003	2510.08	2731.3500000000004	2813.95	2574.83	2869.92	2466.27	3102.04	3092.99	3544.6000000000004	True	False	2436.643078903265	2924.8280559350596	2158.076961106236	2567.2553724392214	2913.4652764377124	3424.491422662434	3019.393828020681	2992.9394949469897	2949.1975700023127	2902.638592123735	0.8394579626671603	1.0076445837492602	0.7434879998364744	0.8844557429248785	1.003729945692638	1.1797856722344762	1.0402238281451088	1.031109936685981	1.0160402256088354	1.0	11.503149237677523	-7.829482553314355	3.9212201115331746	1.057518191209835	0.8684645101421145	0.5710004838036984	0.07573628276499245	0.1625504108253803	4.942432801433095	0.024094649276443458	0.028356100059457243	1.4808717443605884e-08	7.829482553314355	-0.18905368106772058	
GREETVAEDVCIDLTCDSGSQAVPS(ph)PATR	ddPTM_K562_Methotrexat_30min_R1	3	GREETVAEDVCIDLTCDSGSQAVPSPATR	29	1	A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	GREETVAEDVCIDLTCDSGSQAVPS(0.994)PAT(0.006)R;GREETVAEDVCIDLTCDSGS(0.001)QAVPS(0.943)PAT(0.056)R;GREETVAEDVCIDLTCDSGSQAVPS(0.792)PAT(0.208)R	133.88	3.7742e-18	70019000.0	2539.0399999999995	2275.56	3252.0899999999997	2734.58	2306.4	2459.98	2543.94	2547.5499999999997	3047.02	2814.7599999999998	True	False	2427.4268417606527	2651.5576120934725	2569.520751439389	2494.843617109347	2609.732026415702	2935.3363194518083	3114.4833026614833	2457.9512225349145	2905.364705268512	2304.9796884179327	1.053122877376314	1.1503605109481116	1.1147693684029942	1.0823711938310967	1.1322147607326387	1.2734760025007132	1.3511977213123163	1.0663656755352915	1.2604730184250192	1.0	11.170538322280764	-8.048028177224317	8.836827334613254	1.2044639832487154	1.1050597211665132	0.15277548856214007	0.09780937831039581	0.6879562460254064	121.32280799800489	0.03128366070600453	0.03148830224339006	8.953066757591806e-09	8.048028177224317	-0.09940426208220221	
GREVS(ph)PSDVREDSNLESSQLTVQAEFDMSAIPR	ddPTM_K562_Methotrexat_30min_R1	1	GREVSPSDVREDSNLESSQLTVQAEFDMSAIPR	33	2	Q8WYP5;Q8WYP5-3;Q8WYP5-2	Q8WYP5	AHCTF1	Protein ELYS	1	GREVS(0.368)PS(0.368)DVREDS(0.098)NLES(0.085)S(0.073)QLT(0.009)VQAEFDMSAIPR	44.266999999999996	0.013868	7730300.0	315.37	385.95	351.72	510.3	295.87	365.81	334.3	428.23	398.58	626.05	True	False	301.50671241337545	449.72167747168834	277.89877853819013	465.5627912918616	334.78209098838636	436.49760527267125	409.2752848257954	413.1689081769253	380.05010279746205	512.6662784514655	0.588114968911339	0.8772211014738389	0.5420656481982733	0.9081205666542329	0.6530214782209055	0.8514264027490446	0.7983269078318007	0.8059217575708763	0.7413206578467042	1.0	9.00187619476403	-15.999999997297397	0.11230667091559753	1.7629312509992054	0.6254816600680306	0.34008629442398997	0.11236013788142316	186.32855392802793	1.3811688097857404	32.77600709159002	1.2217086926314327	1.0000000062229725e-16	15.999999997297397	-1.1374495909311748	
GRGPS(ph)PEGSSSTESSPEHPPK	ddPTM_K562_Methotrexat_30min_R1	1	GRGPSPEGSSSTESSPEHPPK	21	1	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	GRGPS(0.73)PEGS(0.011)S(0.015)S(0.021)T(0.008)ES(0.108)S(0.108)PEHPPK	73.839	0.011193999999999999	0.0	1701.2	1429.0	2306.7	2070.5	1235.3	1115.8	1250.8	1618.4	1628.8	2000.9	True	False	1626.4172849593635	1665.1179611531104	1822.555192920626	1888.9824796586327	1397.7636022508311	1331.4125583315022	1531.323739934504	1561.479954682147	1553.0774435157473	1638.5176208825778	0.9926150712271886	1.0162343937785694	1.1123195562211394	1.1528606440259968	0.8530659569580545	0.8125714007362	0.9345787438707345	0.9529833153952078	0.9478551977238984	1.0	10.678175472601177	-7.767640646293945	24.999492832373843	0.9101648604029807	1.0679030710086799	0.5653629543480125	0.06498748850028288	115.3323108660265	464944.1669955593	0.021711379671843892	0.025239554157313267	1.7074946582627697e-08	7.767640646293945	0.15773821060569915	
GRGSPDTGSITVSGRESES(ph)FRGVGPSR	ddPTM_K562_Methotrexat_30min_R1	1	GRGSPDTGSITVSGRESESFRGVGPSR	27	3	Q5T1S5	Q5T1S5	RABEPK		1	GRGSPDTGSITVS(0.005)GRES(0.021)ES(0.852)FRGVGPS(0.123)R	43.88399999999999	0.027112	6971400.0	66.696	0.0	59.663999999999994	281.72	67.187	149.1	152.47	54.412	121.58	153.67	True	False	63.76412369953547	0.0	47.1413417568025	257.02204499851706	76.02326814897317	177.9114648209598	186.6652787238678	52.4982991189848	115.92777233708529	125.83887390725455	0.5067124467955009	0.0	0.37461668475789517	2.0424693659285826	0.6041318218168708	1.4138036943344205	1.4833673643761576	0.4171866569441567	0.9212397468092894	1.0	6.975433855471791	-7.0293432553236785	24.88176930285727	1.1146989919089596	0.236844010936889	0.42088967384364506	0.44864758417209594	571.6197066241874	484707.65926297836	0.11987075071766116	0.20809307503400248	9.346666453633196e-08	7.0293432553236785	-0.8778549809720706	
GRGTGEAEEEYVGPR	ddPTM_K562_Methotrexat_30min_R1	1	GRGTGEAEEEYVGPR	15	1	F8WBL2;Q13895	F8WBL2	BYSL	Bystin	0		164.88	2.1523e-05	5581900.0	344.91	396.95	531.36	559.81	377.91	581.36	353.69	533.83	347.87	396.79	False	True	329.7481693835729	462.5392405036579	419.83479746404174	510.7323264610954	427.6117889796907	693.6995921416042	433.01398591096466	515.0548963222757	331.69759962906585	324.927486026287	1.0148361821163256	1.4235152777018005	1.292087667308258	1.5718347890697575	1.3160222122455236	2.134936630400923	1.332648066208635	1.5851379722323866	1.0208357676525746	1.0	8.343973977999159	-5.718529189853609	1.312988886600116	1.4596057306437367	4.225176750338792e-12	0.110496639715427	0.3085569183864976	9.69279818885581	5.4315606555098945	0.08643228497902489	26.858267134969097	1.9119248157623434e-06	5.718529189853609	-1.4596057306395114	
GRLGS(ph)VDSFER	ddPTM_K562_Methotrexat_30min_R1	1	GRLGSVDSFER	11	1	A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47	A0A3B3IRT3	TBC1D4	TBC1 domain family member 4	1	GRLGS(0.985)VDS(0.015)FER	98.0	0.021102000000000003	17292000.0	2471.7	2167.0	2352.5	2053.1	1996.3	1811.5	1706.5	1935.8	2383.5	2495.3	True	False	2363.0470275300154	2525.059917297964	1858.7423988146606	1873.1079106433888	2258.8484410048836	2161.5467372445924	2089.226065076935	1867.716816778115	2272.6916052429906	2043.3769900486254	1.156442026624653	1.2357288594298383	0.9096424242158218	0.9166727039432969	1.1054487018331016	1.0578306146009577	1.022437893375328	0.9140343783227536	1.112223351986022	1.0	10.996739681341733	-6.751086297549928	24.999999598274286	1.004689086291711	1.1960855127053693	0.5247958884314519	0.07281444113236844	162.7931200635664	393095.6214675315	0.018982530857034587	0.04905252306984712	1.7738369712433145e-07	6.751086297549928	0.19139642641365828	
GRLS(ph)PVPVPR	ddPTM_K562_Methotrexat_30min_R1	5	GRLSPVPVPR	10	1	Q9UKM9-2;Q9UKM9;Q5QPM0;Q5QPM1;Q5QPL9	Q9UKM9-2	RALY	RNA-binding protein Raly	1	GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR	89.43	0.010953000000000001	8259469000.0	7998.47	7519.57	8341.970000000001	8031.45	6869.9	7011.78	7233.490000000001	8887.649999999998	7420.469999999999	8114.88	True	False	7646.866835897555	8762.051131664162	6591.104496765114	7327.345248130552	7773.412265120198	8366.707248841773	8855.784265733002	8575.06631193202	7075.493969354915	6645.196597205061	1.1507359826064125	1.3185540869248986	0.9918599698822006	1.1026528923481962	1.1697791256303325	1.2590609060927964	1.3326594836122236	1.2904157441389548	1.0647531439974003	1.0	12.698096166724437	-8.010546891040834	21.365911670933958	1.216254652348679	1.1421409155073514	0.010826936342969495	0.12080573594401127	217.35596228608762	440326.66330304166	0.03904219935883825	0.04154926049085869	9.760073966254722e-09	8.010546891040834	-0.0741137368413276	
GRLSPVPVPR	ddPTM_K562_Methotrexat_30min_R1	1	GRLSPVPVPR	10	1	Q9UKM9-2;Q9UKM9;Q5QPM0;Q5QPM1;Q5QPL9	Q9UKM9-2	RALY	RNA-binding protein Raly	0		77.288	0.016527	0.0	3420.7	2842.0	3578.0	2903.1	2872.9	3160.0	3713.7	3497.9	3352.5	3520.2	False	True	3270.330123830528	3311.5921942597197	2827.0266962630617	2648.5897303535235	3250.736705987543	3770.6252772249027	4546.591759669626	3374.8768743714054	3196.643006745174	2882.6576685645705	1.1344843890044705	1.1487982879037935	0.9807014988605253	0.9188013405949788	1.1276873912004468	1.3080378285439973	1.57722223115505	1.1707518763585747	1.108922173314098	1.0	11.493183803704914	-8.06841908115282	4.8874180269177545	1.2631075582640874	1.0454160621721984	0.233184711654579	0.1553948623621396	0.29345271588114213	13.463207439226855	0.05426144506787253	0.05529070493364643	8.542419971227078e-09	8.06841908115282	-0.21769149609188898	
GRLT(ph)PS(ph)PDIIVLS(ph)DNEASSPR	ddPTM_K562_Methotrexat_30min_R1	4	GRLTPSPDIIVLSDNEASSPR	21	1	A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34	A0A0U1RRM1	GATAD2B	Transcriptional repressor p66-beta	3	GRLT(1)PS(1)PDIIVLS(0.887)DNEAS(0.061)S(0.052)PR;GRLT(1)PS(1)PDIIVLS(0.994)DNEAS(0.003)S(0.003)PR;GRLT(1)PS(1)PDIIVLS(0.398)DNEAS(0.37)S(0.232)PR;GRLT(1)PS(1)PDIIVLS(0.783)DNEAS(0.115)S(0.101)PR	101.66	9.1144e-05	53198000.0	5120.279999999999	4950.21	6615.8	5634.38	4381.5	4962.71	5460.63	5959.799999999999	5782.990000000001	6532.4	True	False	4895.198622050157	5768.14806331682	5227.2339902563335	5140.422653339292	4957.744048621403	5921.683471372406	6685.3152814187315	5750.1904559531995	5514.140057144602	5349.319059749784	0.915106870121733	1.0782957604302308	0.9771774560220079	0.9609489723687816	0.9267990922293766	1.10699762067462	1.2497507078464374	1.0749387710334417	1.0308115847183226	1.0	12.385139540354196	-8.276696878803774	23.404910479098778	1.1070116246761335	0.9773003731255309	0.3885016246854811	0.07452980285645895	361.2095111927772	554090.5424896535	0.026804333181818907	0.02374878224583534	5.288142154101774e-09	8.276696878803774	-0.1297112515506026	
GRLT(ph)PS(ph)PDIIVLSDNEAS(ph)S(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	GRLTPSPDIIVLSDNEASSPR	21	1	A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34	A0A0U1RRM1	GATAD2B	Transcriptional repressor p66-beta	4	GRLT(1)PS(1)PDIIVLS(0.453)DNEAS(0.787)S(0.761)PR;GRLT(1)PS(1)PDIIVLS(0.549)DNEAS(0.744)S(0.706)PR	71.295	0.004511	23847000.0	2909.5	2766.0	3671.6	3986.3	2436.9	2955.5	2927.0	3536.2000000000003	3162.6	3613.8	True	False	2781.6018637369316	3223.0344860388423	2900.9813353827453	3636.82726813002	2757.3950638104525	3526.608546467784	3583.454258705066	3411.8298416627604	3015.571416295985	2959.3058015620268	0.9399508027418806	1.089118429172683	0.9802911662091509	1.2289460812770256	0.9317709113924628	1.1917012917713048	1.210910429335688	1.15291560603905	1.019013112705101	1.0	11.531043070616542	-7.21790497555761	24.98017238482157	1.112211389982107	1.0117199395413756	0.17910027532657968	0.09864541234543953	811.014818260251	465362.1577197086	0.02615128010771386	0.04529496124610087	6.054733389571575e-08	7.21790497555761	-0.10049145044073127	
GRLT(ph)PS(ph)PDIIVLSDNEAS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	1	GRLTPSPDIIVLSDNEASSPR	21	1	A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34	A0A0U1RRM1	GATAD2B	Transcriptional repressor p66-beta	3	GRLT(1)PS(1)PDIIVLS(0.327)DNEAS(0.381)S(0.293)PR	142.96	2.5401e-13	23608000.0	2006.1	2229.4	2871.5	2562.3	1658.8	2295.4	2205.0	2488.9	2104.6	3172.1	True	False	1917.9142460363148	2597.770456679319	2268.8113913693082	2337.667137227389	1876.9612753288086	2738.953563715834	2699.5273797214445	2401.36397627805	2006.757605367902	2597.601951722536	0.7383403160613184	1.000064869429541	0.8734253490473403	0.8999327767201678	0.722574632377431	1.054416194097623	1.0392382781862783	0.9244541777024938	0.772542384346905	1.0	11.342964658376	-8.276974026420483	24.924484465763772	0.9584778344831146	0.8598020329036101	0.2176529791391386	0.10403565225187715	1474.156750116856	2365194.9577829572	0.03742512077675048	0.03312745061120544	5.2847685711622725e-09	8.276974026420483	-0.09867580157950451	
GRLT(ph)PS(ph)PDIIVLSDNEASSPR	ddPTM_K562_Methotrexat_30min_R1	2	GRLTPSPDIIVLSDNEASSPR	21	1	A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34	A0A0U1RRM1	GATAD2B	Transcriptional repressor p66-beta	2	GRLT(1)PS(1)PDIIVLSDNEASSPR;GRLT(1)PS(1)PDIIVLSDNEASSPR	125.91	1.4668e-06	38956000.0	3405.4	3341.6	3938.0	3928.2000000000003	2679.23	3320.4	3131.0	4134.7	3361.2999999999997	4260.7	True	False	3255.702693510827	3893.7426025117084	3111.467615954145	3583.8208049239474	3031.5957063535134	3962.0203071194846	3833.206451658886	3989.2802574297325	3205.033896665936	3489.0459429728603	0.9331211874890899	1.115990636452905	0.8917817841352362	1.0271635465683588	0.8688895921417492	1.1355597982592411	1.0986402914467737	1.143372808106575	0.9185989376611847	1.0	11.768616879403522	-8.277425743369916	24.806611438373608	1.0706580315474274	0.9747653353511498	0.19948429226487352	0.08995418790667684	1161.2492755062763	1801944.7359601094	0.03049990892212176	0.02698537506182684	5.2792746526952005e-09	8.277425743369916	-0.0958926961962776	
GRLT(ph)PSPDIIVLS(ph)DNEASSPR	ddPTM_K562_Methotrexat_30min_R1	2	GRLTPSPDIIVLSDNEASSPR	21	1	A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34	A0A0U1RRM1	GATAD2B	Transcriptional repressor p66-beta	2	GRLT(0.996)PS(0.004)PDIIVLS(0.977)DNEAS(0.013)S(0.01)PR;GRLT(0.997)PS(0.017)PDIIVLS(0.984)DNEAS(0.001)S(0.002)PR	136.16	3.3955e-12	24281000.0	2559.8	2673.8	2398.7	2776.3	2394.8	2681.1	2822.6	2477.4	3071.7	2939.5	True	False	2447.2742570179744	3115.60000317088	1895.2456501750164	2532.906089483826	2709.7581758846363	3199.184629989773	3455.639901134581	2390.268437796313	2928.897337455376	2407.128065662619	1.0166780454800206	1.2943224947664915	0.7873472447147531	1.052252319108158	1.1257224800537196	1.3290462919799497	1.4355862284308227	0.992995957254287	1.2167600798793095	1.0	11.233097183758014	-7.949548406017186	4.121382382027253	1.2113184987884615	1.0398185899933237	0.15633547471500397	0.16918447497374098	0.39177498353029705	14.05854798410039	0.05541242900011864	0.06218850251261162	1.1231857735638733e-08	7.949548406017186	-0.17149990879513788	
GRLT(ph)PSPDIIVLSDNEAS(ph)S(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	GRLTPSPDIIVLSDNEASSPR	21	1	A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34	A0A0U1RRM1	GATAD2B	Transcriptional repressor p66-beta	3	GRLT(0.997)PS(0.561)PDIIVLS(0.311)DNEAS(0.579)S(0.553)PR	89.583	0.00088774	6669100.0	1492.8	1275.2	1410.9	1451.0	953.18	1267.6	1131.9	1492.3	1467.6	1688.2	True	False	1427.1782994282494	1485.9051253061216	1114.7713710893113	1323.7930828228323	1078.539877271471	1512.5457599399635	1385.7573882570082	1439.8149631563078	1399.3715963308623	1382.4506210075303	1.0323539067081626	1.0748341407110755	0.8063733735942522	0.9575698854676282	0.7801652087113468	1.094104727471293	1.0023919604788978	1.0414946771169087	1.012239840661361	1.0	10.433012235212619	-8.315309213397093	24.99988617670141	1.0309112402319953	0.9329249331761932	0.24593599118462073	0.08729577882080919	505.11748052430937	234412.8671408697	0.03161025689410519	0.02787764128115627	4.838277643148905e-09	8.315309213397093	-0.09798630705580214	
GRLT(ph)PSPDIIVLSDNEAS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	2	GRLTPSPDIIVLSDNEASSPR	21	1	A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34	A0A0U1RRM1	GATAD2B	Transcriptional repressor p66-beta	2	GRLT(0.966)PS(0.034)PDIIVLS(0.306)DNEAS(0.436)S(0.258)PR;GRLT(0.999)PS(0.001)PDIIVLS(0.093)DNEAS(0.514)S(0.393)PR	148.69	3.2142e-16	52444000.0	2341.2	2308.1000000000004	2331.2	2617.6	2373.7	2578.5	2255.32	2674.8	2769.3	3109.5	True	False	2238.283651273725	2689.474294008044	1841.9129777329379	2388.1190720861778	2685.8831560453305	3076.7586320646874	2761.1329206500527	2580.7257679089266	2640.555847450981	2546.3394183289383	0.8790201475742859	1.0562120173959524	0.7233572101482497	0.9378636072222476	1.0548017034618147	1.2083065634996304	1.0843538378171418	1.0135042285928066	1.0370007346404249	1.0	11.314209023030326	-7.723349737472701	4.182791720164127	1.076202550577813	0.8935604233887638	0.4450315222667124	0.09222100989188904	0.19761067639436136	7.455978277854894	0.02881996159664291	0.036417826750996966	1.8908203272138512e-08	7.723349737472701	-0.18264212718904915	
GRNDS(ph)GEENVPLDLTR	ddPTM_K562_Methotrexat_30min_R1	4	GRNDSGEENVPLDLTR	16	1	Q6R327-3;Q6R327;Q6R327-4	Q6R327-3	RICTOR	Rapamycin-insensitive companion of mTOR	1	GRNDS(1)GEENVPLDLTR;GRNDS(1)GEENVPLDLTR;GRNDS(1)GEENVPLDLTR;GRNDS(1)GEENVPLDLTR	147.49	1.13e-09	45892000.0	4437.6900000000005	3563.1099999999997	4590.77	4109.58	3680.27	3904.42	3464.19	4904.42	4171.400000000001	4588.54	True	False	4242.614461139973	4151.853364985487	3627.230113584006	3749.2995019345653	4164.290012511673	4658.893906614699	4241.122790728902	4731.928768748279	3977.472524485259	3757.5109421383095	1.1291023569782614	1.104947777643135	0.9653278911065091	0.997814659669608	1.1082575877056196	1.239888313928218	1.128705373327637	1.259325346383543	1.0585391728019227	1.0	11.875561590040105	-7.9938107183376745	17.37561049518269	1.1553084261961566	1.0479939276034962	0.18007407196767133	0.08446297776526644	5.254196810925051	14740.97306538652	0.025838235975843893	0.029051283937702076	1.0143533822814743e-08	7.9938107183376745	-0.1073144985926604	
GRNS(ph)ATSADEQPHIGNYR	ddPTM_K562_Methotrexat_30min_R1	2	GRNSATSADEQPHIGNYR	18	1	Q7KZI7-10;Q7KZI7-13;Q7KZI7-7;Q7KZI7-2;Q7KZI7-15;Q7KZI7-5;Q7KZI7-4;Q7KZI7-16;Q7KZI7-9;Q7KZI7;Q7KZI7-11;E9PC69;E7ETY4;Q7KZI7-8;Q7KZI7-14;Q7KZI7-6;Q7KZI7-3;Q7KZI7-12;F5H6N2;F5H4F6;F5H4J8	Q7KZI7-10	MARK2	Serine/threonine-protein kinase MARK2	1	GRNS(0.996)AT(0.003)S(0.001)ADEQPHIGNYR;GRNS(0.988)AT(0.01)S(0.002)ADEQPHIGNYR	133.93	2.7245000000000003e-07	52764000.0	1905.9299999999998	1803.44	2261.1	2251.83	1698.26	1653.12	1384.1	1875.6999999999998	1535.9499999999998	1965.87	True	False	1822.147599296144	2101.427806761348	1786.5260097597559	2054.415560091618	1921.6109569808928	1972.5620437614027	1694.519658173446	1809.7305678431183	1464.5440197495157	1609.8318933302178	1.1318868801429411	1.3053709616935085	1.10975935882598	1.2761677592569627	1.193671814394052	1.2253217568455639	1.0526065890445473	1.1241736328750298	0.9097496613263458	1.0	10.65269432746079	-9.193969356152655	1.2271833592612502	0.9713398339547742	1.2113014168556158	0.619725907982082	0.07218523151162255	0.2977108098093161	0.8017366333686248	0.05516857935195981	0.022198164760669024	6.397799768074877e-10	9.193969356152655	0.23996158290084157	
GRS(ph)IDQDYER	ddPTM_K562_Methotrexat_30min_R1	3	GRSIDQDYER	10	1	Q9UDY2-7;A0A3B3ITE1;A0A1B0GTW1;A0A2R8YDH4;Q9UDY2-3;Q9UDY2;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3IRI3;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3ISZ5	Q9UDY2-7	TJP2	Tight junction protein ZO-2	1	GRS(1)IDQDYER;GRS(1)IDQDYER;GRS(1)IDQDYER	113.67	0.0019914	75909000.0	4193.19	3705.8799999999997	5543.459999999999	4873.38	4362.77	3984.27	4016.89	4380.85	4328.62	4935.2	True	False	4008.86238838394	4318.2136808104215	4379.96350186317	4446.138341810571	4936.55072532329	4754.173789015464	4917.779835069961	4226.773022410584	4127.3834010014325	4041.3874569342247	0.9919520043804565	1.068497818342366	1.083777180123627	1.100151467581232	1.2214989970469525	1.1763716890985638	1.2168543322002001	1.0458717624706522	1.0212788169863931	1.0	11.980634957242916	-6.4111253451468935	1.3332351126072373	1.1234851100449925	0.9619213110737088	0.1802296675146816	0.07342357406098629	1.6524936241550359	3.2134527331616947	0.023241995797315684	0.3369042565718226	3.880383550250115e-07	6.4111253451468935	-0.1615637989712837	
GRS(ph)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK	ddPTM_K562_Methotrexat_30min_R1	7	GRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFK	32	1	M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;M0R0K8;M0QYI8;M0QYZ0	M0R3F1	HNRNPUL1	Heterogeneous nuclear ribonucleoprotein U-like protein 1	1	GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(0.992)PQPPAEEDEDDFDDT(0.008)LVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(0.975)PQPPAEEDEDDFDDT(0.025)LVAIDTYNCDLHFK;GRS(0.994)PQPPAEEDEDDFDDT(0.006)LVAIDTYNCDLHFK	188.39	2.7180999999999997e-47	653207400.0	14700.29	11384.66	16524.67	15282.69	10954.69	10609.429999999998	11046.85	15173.919999999998	16131.55	18050.190000000002	True	False	14054.082853230248	13265.781558867307	13056.367589976886	13942.880295606934	12395.423748029763	12659.552194603859	13524.387317313305	14640.24463294026	15381.597761509354	14781.12568108276	0.950812756515358	0.897481142173439	0.883313481779452	0.9432894758111263	0.8385980889056186	0.8564673941448084	0.9149768163207043	0.9904688552697442	1.040624245634762	1.0	13.851468524045313	-9.29029855675944	3.0181077587468996	1.0188406628736684	0.8937412772278164	0.70772537182039	0.03358945350337555	0.14678700003590828	2.6802099886689104	0.021591149151892294	0.00963910100894819	5.125089373899482e-10	9.29029855675944	-0.125099385645852	
GRSRCS(ph)RK	ddPTM_K562_Methotrexat_30min_R1	1	GRSRCSRK	8	3	Q7Z4P5	Q7Z4P5	GDF7	Growth/differentiation factor 7	1	GRS(0.001)RCS(0.999)RK	65.157	0.030969	0.0	93.072	118.29	120.45	0.0	105.31	0.0	111.15	155.22	0.0	61.037	True	False	88.98066632126613	137.83541191378686	95.1691910466422	0.0	119.1601108662147	0.0	136.07821689616256	149.76082462046645	0.0	49.982607839377216	1.7802325682407776	2.7576674741888434	1.9040461304555254	0.0	2.384031486495152	0.0	2.7225113450154486	2.9962587206680746	0.0	1.0	5.6433542707974915	-7.005041639672994	24.80213387751142	1.3967404874955578	2.2844269511218807	0.11493091544962974	1.0853153464624785	460.4009971165016	2264972.4024339803	0.2824048148549144	0.5629637142111642	9.884583178268288e-08	7.005041639672994	0.8876864636263229	
GRSSADHAALNSIVSLQASVSFEDVTVDFSK	ddPTM_K562_Methotrexat_30min_R1	1	GRSSADHAALNSIVSLQASVSFEDVTVDFSK	31	1	P51814	P51814	ZNF41	Zinc finger protein 41	0		36.092	0.027422000000000002	18626000.0	1661.5	998.01	1970.6	1730.7	1468.1	1435.3	1352.1	1684.8	1629.9	1602.4	False	True	1588.4624494239267	1162.9141892305222	1556.9979898423667	1578.972218085098	1661.180882752729	1712.6514115192722	1655.3428435924552	1625.54462904627	1554.1263047558425	1312.189832426529	1.210543177648701	0.8862392928925816	1.1865645894871273	1.2033108160617503	1.265960794468921	1.3051857049922428	1.26151171323387	1.238802945180789	1.1843761217703688	1.0	10.3577607321251	-6.977105778142699	24.89327360703683	1.2245685077063178	1.0453937425118498	0.24945589121415224	0.10718333839794054	237.21879550959744	257928.81797997325	0.02609759224829093	0.05432161692954719	1.0541301178437464e-07	6.977105778142699	-0.17917476519446796	
GRT(ph)SSTNEDEDLNPEQKIER	ddPTM_K562_Methotrexat_30min_R1	1	GRTSSTNEDEDLNPEQKIER	20	2	Q99081;Q99081-3;B4DGI9;F5GY10;Q99081-4;Q99081-2;B4DZP2	Q99081	TCF12	Transcription factor 12	1	GRT(0.448)S(0.448)S(0.067)T(0.037)NEDEDLNPEQKIER	83.73299999999999	0.0025727	30224000.0	1430.0	1196.6	2382.4	2003.9	1306.0	1106.5	1288.9	1369.7	1460.7	1852.3	True	False	1367.1389122336539	1394.3178112776848	1882.3667974223351	1828.2211982554604	1477.76189147542	1320.3154649523265	1577.9686347949973	1321.5268746466488	1392.792375824811	1516.8305208460183	0.9013128978121607	0.919231115220439	1.240986894417471	1.2052903558637273	0.9742432468006988	0.8704436301927226	1.0403064898212089	0.8712422755770776	0.9182254422517655	1.0	10.566844183434812	-7.9834760283506885	24.80858081634911	0.9364938234926862	1.0712634964168328	0.22681634350947188	0.11069350126355569	346.6834745200711	520496.95997291675	0.03723093707228106	0.04220476250020274	1.0387809381848212e-08	7.9834760283506885	0.13476967292414666	
GRTSS(ph)TNEDEDLNPEQK	ddPTM_K562_Methotrexat_30min_R1	2	GRTSSTNEDEDLNPEQK	17	1	Q99081;Q99081-3;B4DGI9;F5GY10;Q99081-4;Q99081-2;B4DZP2	Q99081	TCF12	Transcription factor 12	1	GRT(0.025)S(0.025)S(0.475)T(0.475)NEDEDLNPEQK;GRT(0.092)S(0.092)S(0.797)T(0.019)NEDEDLNPEQK	126.09	7.884899999999999e-05	32093000.0	7021.7	5199.6	9436.2	6956.9	6317.0	5230.700000000001	5115.0	7445.8	7687.7	9463.8	True	False	6713.034475546186	6058.745521911623	7455.670573302823	6346.999378284055	7147.796223928199	6241.458746069711	6262.168955680356	7183.926993680387	7330.300504982812	7749.814113903008	0.866218773364272	0.7817923672572169	0.9620450844011217	0.8189873053726112	0.922318409044831	0.8053688326372451	0.8080411818454011	0.9269805556745637	0.9458679133777419	1.0	12.91994599115651	-9.622150803969939	2.3415719330169633	0.9833047008587733	0.8537091385125417	0.45405383618013295	0.054110946418581725	0.2734277402079916	2.766785564898377	0.04636933123245889	0.014264167845928797	2.38698228571363e-10	9.622150803969939	-0.1295955623462316	
GRTSS(ph)TNEDEDLNPEQKIER	ddPTM_K562_Methotrexat_30min_R1	1	GRTSSTNEDEDLNPEQKIER	20	2	Q99081;Q99081-3;B4DGI9;F5GY10;Q99081-4;Q99081-2;B4DZP2	Q99081	TCF12	Transcription factor 12	1	GRT(0.273)S(0.273)S(0.412)T(0.042)NEDEDLNPEQKIER	81.38	0.012029999999999999	33679000.0	1035.8	696.74	1284.0	1356.0	827.82	743.91	662.18	875.27	819.6	1296.8	True	False	990.2674722319	811.8644424449395	1014.5059468982029	1237.1215853258173	936.6928399702774	887.6600791077142	810.6907212262794	844.486257992241	781.4969748928695	1061.9369537510747	0.9325106059582756	0.7645128456799575	0.9553353834374709	1.1649670735686697	0.8820606879359475	0.8358877388834025	0.763407581177659	0.7952320097810575	0.735916545829196	1.0	10.052482401829934	-8.152321099794841	3.87947788096084	0.8090943572628533	0.9481089853110538	0.20863960327369568	0.11279737129571187	0.36691081444177936	9.81247504196565	0.0402213074934537	0.04020589001881837	7.041722399445675e-09	8.152321099794841	0.13901462804820053	
GRY(ph)RSQS(ph)GEDES(ph)MNQPGPIK	ddPTM_K562_Methotrexat_30min_R1	1	GRYRSQSGEDESMNQPGPIK	20	2	A0A0C4DG33;O43933-2;O43933	A0A0C4DG33	PEX1	Peroxisome biogenesis factor 1	3	GRY(0.588)RS(0.432)QS(0.98)GEDES(1)MNQPGPIK	51.938	0.029695	11277000.0	2953.0	2713.4	2220.8	2572.9	2897.2	3062.4	2699.3	3723.7	3068.2	2759.0	True	False	2823.189655822363	3161.7432300859705	1754.6844290276715	2347.3378516849525	3278.232581916222	3654.1654585359306	3304.6867374521967	3592.73536038675	2925.5600516914374	2259.318364743381	1.249575845475424	1.399423507295347	0.7766432816240011	1.0389584258310443	1.4509830190702546	1.617375185170497	1.4626919291330378	1.5901855251793262	1.2948861467886708	1.0	11.141671862553029	-7.76869456447687	24.781014490090694	1.4459309660460007	1.1121335592820236	0.2742799817662668	0.22170074058690273	173.2711349200137	591828.1951542879	0.06859397251787316	0.07937705404878115	1.703356042693576e-08	7.76869456447687	-0.33379740676397707	
GS(ph)DDELFLGGSNQDSVQGLGR	ddPTM_K562_Methotrexat_30min_R1	3	GSDDELFLGGSNQDSVQGLGR	21	0	Q96JB3-2;Q96JB3	Q96JB3-2	HIC2	Hypermethylated in cancer 2 protein	1	GS(1)DDELFLGGSNQDSVQGLGR;GS(0.862)DDELFLGGS(0.138)NQDSVQGLGR;GS(1)DDELFLGGSNQDSVQGLGR	249.52	5.9083e-91	88717000.0	2737.08	2558.87	3592.26	2856.1400000000003	2943.0099999999998	2842.6400000000003	2560.8500000000004	3429.71	3380.37	3632.34	True	False	2616.7612404870556	2981.679774146857	2838.293717137492	2605.746640643421	3330.0673998706548	3391.93994875019	3135.1858006166244	3309.085155321865	3223.217336528317	2974.4880279057543	0.8797350051294162	1.0024178097789038	0.9542125201074847	0.8760319813685877	1.1195430503094856	1.1403441254185684	1.0540253553563679	1.1124889810538892	1.0836208807327712	1.0	11.538425656220888	-7.7685378819288955	24.99376470428877	1.091846298386026	0.9352730155538634	0.7014541737382896	0.04994018424068281	88.6270127649689	312054.24103047565	0.01500586749786693	0.017373213910333155	1.7039706816648368e-08	7.7685378819288955	-0.15657328283216254	
GS(ph)GGGGGGGGQGSTNYGK	ddPTM_K562_Methotrexat_30min_R1	1	GSGGGGGGGGQGSTNYGK	18	0	Q99729-3;Q99729-4	Q99729-3			1	GS(1)GGGGGGGGQGSTNYGK	93.115	0.0028501999999999998	7070100.0	5498.9	4153.9	7082.2	6069.4	4527.8	3998.8	4054.0	5009.4	4820.3	6374.4	True	False	5257.174940196945	4840.2613707725	5595.743003989451	5537.305125351414	5123.285062957433	4771.511505875611	4963.212697229355	4833.21656264505	4596.20530511969	5219.934390801087	1.007134294534714	0.9272647907801923	1.0719948920911033	1.0607997554738655	0.9814845703781305	0.9140941530384527	0.9508189807856314	0.9259151937163163	0.880510167564448	1.0	12.349815958380473	-8.056944674170666	4.827102842286433	0.9314395793563839	1.0152502139652095	0.41686207869638836	0.046002199202248927	0.21768147175424388	10.59927180411953	0.015801182757602682	0.01620110759183324	8.771125515259009e-09	8.056944674170666	0.08381063460882565	
GS(ph)NRSSLMDTADGVPVSSR	ddPTM_K562_Methotrexat_30min_R1	1	GSNRSSLMDTADGVPVSSR	19	1	Q9P265	Q9P265	DIP2B	Disco-interacting protein 2 homolog B	1	GS(0.921)NRS(0.019)S(0.058)LMDT(0.002)ADGVPVSSR	93.649	0.002438	6902400.0	1226.7	1223.5	1551.0	1634.9	1215.9	1246.1	1080.4	1232.6	1483.4	1173.6	True	False	1172.775736809106	1425.662579055864	1225.4662956690906	1491.5708553460013	1375.8121622090057	1486.891189224667	1322.7072022907253	1189.2487593556687	1414.4370577795062	961.0496675834836	1.220307104166633	1.483443184201529	1.2751331559694212	1.552022653622564	1.431572382381052	1.5471533255543268	1.3763151342808466	1.2374477609944774	1.4717627043522579	1.0	9.908467181985783	-12.106871749203778	5.379360414938025	0.9999936843574643	1.4026047003993376	0.5193554242084082	0.11525025401503682	8.53153638072966e-06	1.4165716744611799e-06	0.10905913231711611	0.02645030995231171	7.818586599075336e-13	12.106871749203778	0.4026110160418733	
GS(ph)PHY(ph)FSPFRPY	ddPTM_K562_Methotrexat_30min_R1	1	GSPHYFSPFRPY	12	1	Q13242	Q13242	SRSF9	Serine/arginine-rich splicing factor 9	2	GS(1)PHY(0.585)FS(0.415)PFRPY	99.991	0.020705	62124000.0	2278.7	2146.8	2680.6	2504.8	2445.6	2304.2	2053.9	2525.2	2320.5	2634.2	True	False	2178.531076438338	2501.5222106392575	2117.9786925664516	2285.2080729528802	2767.2392663034357	2749.454039171397	2514.5393583718246	2436.387284703014	2212.6204614920734	2157.1208540801053	1.009925369882608	1.1596578865332146	0.9818544420264549	1.0593787866036821	1.2828392350244617	1.2745943436460307	1.165692387431922	1.1294625797598161	1.0257285572604766	1.0	11.07489129134022	-6.251881256957136	23.79289151295376	1.129107698899679	1.0099252601148787	0.09114621930423361	0.10048548086490587	1701.8294255471765	4236160.752372014	0.026866304858017758	0.3255132289551486	5.599106690819192e-07	6.251881256957136	-0.11918243878480039	
GS(ph)PHYFSPFRPY	ddPTM_K562_Methotrexat_30min_R1	5	GSPHYFSPFRPY	12	1	Q13242	Q13242	SRSF9	Serine/arginine-rich splicing factor 9	1	GS(1)PHYFSPFRPY;GS(1)PHYFSPFRPY;GS(1)PHYFSPFRPY;GS(0.999)PHY(0.001)FSPFRPY;GS(0.987)PHY(0.013)FSPFRPY	123.28	0.00065647	2036802200.0	4802.119999999999	4254.4400000000005	5055.51	4840.780000000001	4345.46	4583.2	4264.91	5271.99	5110.13	5168.25	True	False	4591.024554696133	4957.413896884701	3994.4275386318827	4416.396333195802	4916.964156914837	5468.838534992777	5221.4246335817625	5086.571123507624	4872.561171680453	4232.229843633556	1.0847767546467977	1.1713479844063814	0.9438115807062337	1.0435152381525978	1.161790436384572	1.2921884531435415	1.2337289860181457	1.2018655204086408	1.1512988074147563	1.0	12.047202264019992	-7.8597393401047455	4.922674409451476	1.195249498342188	1.0607620879781987	0.26744843326884316	0.08831451470233614	0.24722067451998306	9.90144475080461	0.027675066083772407	0.03181455647634271	1.3812130083059224e-08	7.8597393401047455	-0.13448741036398926	
GS(ph)PNTASAEATLPR	ddPTM_K562_Methotrexat_30min_R1	1	GSPNTASAEATLPR	14	0	Q6PJG6;Q6PJG6-3	Q6PJG6	BRAT1	BRCA1-associated ATM activator 1	1	GS(0.991)PNT(0.004)ASAEAT(0.005)LPR	172.42	0.00011674	56239000.0	467.94	316.69	382.07	341.76	528.62	379.55	357.06	385.93	311.26	503.54	True	False	447.36991789553554	369.01763969039774	301.8787282954801	311.79843141663076	598.1427956138865	452.8926658135165	437.13979419652577	372.3566231527937	296.7895905382559	412.3440265976376	1.0849433701923756	0.8949266046976899	0.7321040413422825	0.7561609028009068	1.450591634731137	1.0983369143248096	1.0601336893454836	0.9030241718916343	0.7197620709754117	1.0	8.687704697964218	-4.927718119705535	17.386240544006558	0.9720896710650878	53.45620626324818	0.0	0.21089829868392052	0.0	0.0	0.051496257857724465	0.0	1.1810869754017436e-05	4.927718119705535	52.48411659218309	
GS(ph)PTGGAQLLK	ddPTM_K562_Methotrexat_30min_R1	2	GSPTGGAQLLK	11	0	Q14684-2;Q14684	Q14684-2	RRP1B	Ribosomal RNA processing protein 1 homolog B	1	GS(0.998)PT(0.002)GGAQLLK;GS(1)PTGGAQLLK	158.34	1.5347e-07	63711000.0	4212.1	3364.2	5441.700000000001	4178.8	4282.2	3814.3	3170.0	4820.200000000001	4747.5	5539.4	True	False	4026.9411274261342	3920.076868377395	4299.561535230494	3812.4510920055504	4845.384358098038	4551.359492062959	3880.953194429467	4650.670833884635	4526.789761229743	4536.160982116522	0.8877421112923572	0.864183807371918	0.9478414792114292	0.8404576264016766	1.0681685189746586	1.0033505226129222	0.8555589648889969	1.0252437804168677	0.9979341075143222	1.0	12.147256125114197	-7.749028206012896	24.999962542237927	0.9867460569103574	0.8880500291777458	0.45631357625938485	0.056840186466760464	235.47641700015043	474320.845177573	0.017221520859112056	0.022074652102858076	1.7822630115081226e-08	7.749028206012896	-0.09869602773261166	
GS(ph)PVFLPR	ddPTM_K562_Methotrexat_30min_R1	3	GSPVFLPR	8	0	Q9NYV4-2;J3QSD7;Q9NYV4-3;Q9NYV4	Q9NYV4-2	CDK12	Cyclin-dependent kinase 12	1	GS(1)PVFLPR;GS(1)PVFLPR;GS(1)PVFLPR	101.65	0.014943999999999999	58604700.0	4006.7	3366.4800000000005	4148.0	3648.3999999999996	3907.7	3698.7	3672.2	4189.6	4070.9	4237.400000000001	True	False	3830.5702654871166	3922.7335996240217	3277.3914857739464	3328.5504365064244	4421.631043888586	4413.421428123967	4495.784328259905	4042.249393312116	3881.6447475492696	3469.965798754478	1.1039216198793877	1.1304819203209617	0.9445025328348612	0.9592458916169105	1.2742578170296959	1.2718919102050334	1.2956278502438376	1.1649248516406288	1.1186406358652183	1.0	11.760705727808427	-7.762842407303858	24.999779719782207	1.2054236935792553	1.0349600214807226	0.3600919052570476	0.09821337733636426	39.00148203263518	694952.1763657617	0.03090798149707001	0.03698980584848747	1.7264642614479758e-08	7.762842407303858	-0.17046367209853264	
GS(ph)SPGIQDTLEAEDGAFETDEAPEDR	ddPTM_K562_Methotrexat_30min_R1	1	GSSPGIQDTLEAEDGAFETDEAPEDR	26	0	Q9UNX4	Q9UNX4	WDR3	WD repeat-containing protein 3	1	GS(0.5)S(0.5)PGIQDTLEAEDGAFETDEAPEDR	237.56	8.159599999999999e-73	22736000.0	1343.8	1199.0	1507.9	1115.8	1171.9	1164.4	1162.8	1246.9	1276.6	1250.1	True	False	1284.7281610206878	1397.11437048466	1191.412396672742	1017.9795463912591	1326.0253909801252	1389.4038205065428	1423.5874998367776	1203.0458202503523	1217.251144641578	1023.694776283327	1.2549914200842955	1.3647763013474459	1.1638355731366905	0.9944170567004182	1.2953327707644007	1.3572442222973686	1.390636674932854	1.175199725662551	1.1890762489391473	1.0	9.999569911736097	-10.160868036912339	1.7301003249330518	1.001597393457208	1.2532924290285268	0.31719023442554417	0.11123084947243099	0.8389551261516633	4.924161926832399	0.11692500157734968	0.03327201745618095	6.904495693783518e-11	10.160868036912339	0.2516950355713188	
GS(ph)SPLGPAGLGAEEPAAGPQLPSWLQPER	ddPTM_K562_Methotrexat_30min_R1	2	GSSPLGPAGLGAEEPAAGPQLPSWLQPER	29	0	H0YKL4;O43482	H0YKL4	OIP5	Protein yippee-like;Protein Mis18-beta	1	GS(0.5)S(0.5)PLGPAGLGAEEPAAGPQLPSWLQPER;GS(0.791)S(0.209)PLGPAGLGAEEPAAGPQLPSWLQPER	174.62	1.9826e-35	69048000.0	3043.1000000000004	2238.8	2835.3	2880.8999999999996	2568.4	2622.3	2436.5	3514.8999999999996	3082.2	3326.6	True	False	2909.3289677050548	2608.723646906638	2240.2092766670385	2628.335969885802	2906.189618733131	3129.022362173057	2982.9471477058055	3391.2789747357156	2938.9091947471948	2724.120504586928	1.067988351765742	0.9576388572069472	0.8223605647749173	0.9648383635966757	1.0668359251507529	1.1486358099446583	1.0950129198334142	1.2449078405398781	1.0788469855862108	1.0	11.411574808689256	-7.859652063102052	3.0300107101261524	1.1264949889482945	0.9422070887970913	0.4668474930613987	0.08032102107611347	0.2066007147280505	3.8091756176579525	0.026415787935240857	0.031111565666751318	1.3814906085290929e-08	7.859652063102052	-0.18428790015120322	
GS(ph)SVDAPPRPCHTTPDSQFGTEHVLR	ddPTM_K562_Methotrexat_30min_R1	1	GSSVDAPPRPCHTTPDSQFGTEHVLR	26	1	Q9BSJ8;Q9BSJ8-2	Q9BSJ8	ESYT1	Extended synaptotagmin-1	1	GS(0.419)S(0.419)VDAPPRPCHT(0.114)T(0.047)PDS(0.001)QFGTEHVLR	62.858000000000004	0.0024983	16137000.0	1141.8	909.11	1128.4	1096.8	890.14	895.18	953.72	1065.3	1276.9	1043.2	True	False	1091.6078391527171	1059.3249752721508	891.56426049839	1000.6452468918551	1007.2090123108185	1068.1608657171485	1167.6159875682247	1027.8327951822118	1217.5371977070592	854.2663711853189	1.277830751593417	1.2400405903867049	1.0436607252388026	1.1713503898127597	1.1790339012330395	1.2503838401540317	1.3668055151792107	1.2031759997248452	1.4252430375056104	1.0	9.73854218054347	-8.310739841364509	4.499257553700951	1.2706609851873156	1.1769449858342746	0.058866803128649	0.11960009927709452	0.4760538231298516	21.279447608575943	0.041202797447621606	0.03684364289827836	4.889451680726062e-09	8.310739841364509	-0.09371599935304098	
GS(ph)TFIVQGVTLGAEGIISEFTPLPR	ddPTM_K562_Methotrexat_30min_R1	1	GSTFIVQGVTLGAEGIISEFTPLPR	25	0	E7EVY2	E7EVY2	SLC25A46		1	GS(0.5)T(0.5)FIVQGVTLGAEGIISEFTPLPR	54.049	0.030931999999999998	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
GS(ph)VHSLDAGLLLPSGDPFSK	ddPTM_K562_Methotrexat_30min_R1	2	GSVHSLDAGLLLPSGDPFSK	20	0	I3L456;Q15276-2;Q15276	I3L456	RABEP1	Rab GTPase-binding effector protein 1	1	GS(0.934)VHS(0.066)LDAGLLLPSGDPFSK;GS(0.553)VHS(0.447)LDAGLLLPSGDPFSK	103.94	0.00016512	17289900.0	7869.5	6010.9	10559.1	7829.0	6492.5	5641.700000000001	5249.0	7297.200000000001	7012.299999999999	8108.6	True	False	7523.566202673243	7004.099057169514	8342.88920863927	7142.643725306652	7346.377550079755	6731.878679278396	6426.221866738255	7040.553339907665	6686.299703564261	6640.053966059507	1.1330579903611915	1.0548256223474712	1.256449006481539	1.0756906136329798	1.106373169198715	1.013828910681788	0.9677966323143984	1.0603156805494807	1.0069646628989972	1.0	12.696979251573149	-8.091490826973581	2.0511754501741963	1.0098229879700338	1.13489295319291	0.5374280201918069	0.05391140399419891	0.26446597152775847	2.2054268962699015	0.02011810137892552	0.02073435323596774	8.100450510070639e-09	8.091490826973581	0.12506996522287617	
GS(ph)YGDLGGPIITTQVTIPK	ddPTM_K562_Methotrexat_30min_R1	2	GSYGDLGGPIITTQVTIPK	19	0	Q5T6W2;P61978-3;P61978;P61978-2;S4R359	Q5T6W2	HNRNPK	Heterogeneous nuclear ribonucleoprotein K	1	GS(0.999)YGDLGGPIIT(0.001)TQVTIPK;GS(1)YGDLGGPIITTQVTIPK	214.34	3.5238999999999995e-147	6225000.0	3902.7	3182.3	4313.2	3018.1	3051.3	2525.1000000000004	2533.3	4017.0	4017.2	5222.4	True	False	3731.1419809610347	3708.120985148737	3407.9182633655228	2753.5078589025434	3452.599432970098	3013.039837822974	3101.4570118133056	3875.7198331427267	3830.441248828251	4276.572753909327	0.8724607754071997	0.8670777275469117	0.796880693833691	0.6438585328369522	0.8073285856797331	0.7045454412224544	0.72522021494389	0.906267718607109	0.8956801320231825	1.0	12.062239368283889	-9.377459639770477	4.711144030655225	0.9336199558682475	0.77227166102084	0.5193865990001181	0.07088068432335018	0.2094638169854419	7.159674431554927	0.04445813430462297	0.020261451170720847	4.193149630139e-10	9.377459639770477	-0.16134829484740754	
GSALDDAVNPLHENGDDS(ph)LS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	GSALDDAVNPLHENGDDSLSPR	22	0	Q9BVI0	Q9BVI0	PHF20	PHD finger protein 20	2	GSALDDAVNPLHENGDDS(1)LS(1)PR;GSALDDAVNPLHENGDDS(1)LS(1)PR	86.99700000000001	0.0022986	13439100.0	3420.3	3343.4	3687.7000000000003	3929.4	3224.2	3398.0	3403.8	3587.4	3923.1	3643.7000000000003	True	False	3269.947707351583	3895.8400219169434	2913.7021654022624	3584.915602787067	3648.23881354904	4054.6154088639905	4167.188795961839	3461.229108642323	3740.715937289187	2983.7906218251005	1.0959038759064965	1.3056680295931649	0.9765102631832904	1.2014635264837301	1.2226859307297895	1.3588806731967997	1.3966089863949258	1.1600107203652201	1.2536790986363167	1.0	11.542930587194675	-6.222987379624696	21.11329427059719	1.2169587843070253	1.0959015205249416	0.05934215780714558	0.130397979260873	7087.810220201446	3891201.6950508095	0.03290401965994867	5.55876605022436	5.984289848475791e-07	6.222987379624696	-0.1210572637820837	
GSALDDAVNPLHENGDDSLS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	GSALDDAVNPLHENGDDSLSPR	22	0	Q9BVI0	Q9BVI0	PHF20	PHD finger protein 20	1	GSALDDAVNPLHENGDDS(0.23)LS(0.77)PR	119.88	1.6013999999999998e-06	14569000.0	2116.6	1705.6	1974.4	1865.8	1836.4	1744.2	1613.0	2067.5	1766.2	2053.6	True	False	2023.55679834528	1987.4214097569939	1560.00042177244	1702.2282108413783	2077.918788289019	2081.2419647264783	1974.7563099731017	1994.7848531298446	1684.0897475058387	1681.673140209136	1.203299707869287	1.1818119480161493	0.9276478195866502	1.0122229880116216	1.2356258410778955	1.237601954246383	1.1742806986424945	1.18619058926146	1.001437025566337	1.0	10.715681606887811	-9.773437851369069	24.20722322490245	1.0007182690781662	1.141507859368061	0.27121758564654186	0.09437015643671207	263.86065050080924	532320.2993679476	0.09838706668544002	0.026258432261699004	1.6848535162924523e-10	9.773437851369069	0.1407895902898948	
GSALGDLAPSRPPS(ph)FSPCPAEDLFPGHR	ddPTM_K562_Methotrexat_30min_R1	1	GSALGDLAPSRPPSFSPCPAEDLFPGHR	28	1	O75427	O75427	LRCH4	Leucine-rich repeat and calponin homology domain-containing protein 4	1	GSALGDLAPS(0.192)RPPS(0.404)FS(0.404)PCPAEDLFPGHR	69.99	0.00025887	8695000.0	1979.1	1957.3	1771.9	1803.8	1803.8	1744.0	2025.6	2766.7	2541.7	2664.5	True	False	1892.1011337074278	2280.710556588512	1400.0024044462045	1645.6636545801691	2041.0313168785312	2081.003317557035	2479.892362976759	2669.3935928195115	2423.5369217730686	2181.9332304671043	0.8671672933375556	1.0452705539941118	0.6416339349424064	0.7542227377085542	0.9354233614387875	0.953742895749169	1.1365574016423354	1.2234075523237036	1.1107291863620603	1.0	11.09139123895979	-8.496480322975527	1.928053458405161	1.1380944163203	0.8373387568910451	0.5608732406113501	0.11180111284137767	0.25250146818758445	1.8806306151784766	0.05250412757914828	0.04074429750269068	3.1880100148555455e-09	8.496480322975527	-0.30075565942925486	
GSALGDLAPSRPPSFS(ph)PCPAEDLFPGHR	ddPTM_K562_Methotrexat_30min_R1	1	GSALGDLAPSRPPSFSPCPAEDLFPGHR	28	1	O75427	O75427	LRCH4	Leucine-rich repeat and calponin homology domain-containing protein 4	1	GSALGDLAPS(0.002)RPPS(0.241)FS(0.757)PCPAEDLFPGHR	92.38	1.8619000000000002e-05	9027500.0	1313.9	1199.0	978.78	1079.1	1258.9	1082.2	1222.8	1800.5	2063.3	1811.1	True	False	1256.1425292194383	1397.11437048466	773.3474538201118	984.4969784108329	1424.4674159099575	1291.3198338648058	1497.0440271761374	1737.175394466884	1967.3776333534145	1483.0922400821808	0.8469753230924013	0.9420279688114634	0.5214425865900689	0.6638137209566144	0.9604712218243588	0.8706942150767719	1.0094072281661886	1.1713198596269534	1.326537608506669	1.0	10.534392612846274	-8.759307275431027	1.264688914659551	1.1903231730643975	0.7641557202055425	0.588229191869551	0.13998993246130725	0.3270303250255168	1.051157102926997	0.09459322224566159	0.05454275186660697	1.740574932427207e-09	8.759307275431027	-0.42616745285885504	
GSALGTPAAAEPVT(ph)PTSK	ddPTM_K562_Methotrexat_30min_R1	2	GSALGTPAAAEPVTPTSK	18	0	P00519-2;P00519	P00519-2	ABL1	Tyrosine-protein kinase ABL1	1	GSALGTPAAAEPVT(0.974)PT(0.025)S(0.001)K;GSALGTPAAAEPVT(0.841)PT(0.142)S(0.017)K	218.11	1.6595999999999998e-34	35779000.0	7936.0	5475.3	8163.299999999999	7369.8	6299.4	5757.0	5460.4	7863.099999999999	8190.700000000001	8935.8	True	False	7587.14294229809	6380.000260812897	6449.934888095094	6723.701076352663	7127.881515436646	6869.4587724632165	6685.033698063932	7586.550316152491	7809.9161447718725	7317.440030327622	1.03685755002469	0.8718896546292908	0.8814469078479503	0.918859744457875	0.9740949684445191	0.9387789642268721	0.9135754676987254	1.0367765618453344	1.0673016946368061	1.0	12.837123301817675	-9.267861397810835	24.069796591851286	1.0390293681810046	0.9304453839688196	0.4935244028591512	0.04677009856751313	251.62054336593204	943065.689390231	0.024795286466845385	0.012380169715630105	5.396828312124316e-10	9.267861397810835	-0.10858398421218496	
GSCGS(ph)S(ph)GRTAEKT(ph)S(ph)LSFK	ddPTM_K562_Methotrexat_30min_R1	1	GSCGSSGRTAEKTSLSFK	18	2	H0Y612;Q9UPN9-2;Q9UPN9	H0Y612	TRIM33	E3 ubiquitin-protein ligase TRIM33	4	GS(0.152)CGS(0.94)S(0.907)GRT(0.19)AEKT(0.855)S(0.759)LS(0.198)FK	50.827	0.030412	0.0	363.79	411.24	429.31	355.09	317.88	352.21	220.27	447.33	407.19	366.1	True	False	347.7982271898465	479.1904201151888	339.20369786827695	323.9598110127908	359.686791778106	420.26959775043764	269.6711546173433	431.59715035094257	388.2598257767537	299.79574241846757	1.1601172998126672	1.598389677750375	1.1314493499203937	1.0806017737256388	1.1997728482616006	1.40185312292997	0.8995162921324109	1.4396373573194412	1.2950811864259373	1.0	8.22783608461694	-12.779156796653737	2.459763243622836	0.9295750496955368	1.2461905058214906	0.13110865921024462	0.18931942968358279	20304783.13209216	13447856.154488267	8585143.03862089	0.04726339592868624	1.6628122041950046e-13	12.779156796653737	0.31661545612595376	
GSDFDCELR	ddPTM_K562_Methotrexat_30min_R1	3	GSDFDCELR	9	0	Q5T6W2;P61978-3;P61978;P61978-2	Q5T6W2	HNRNPK	Heterogeneous nuclear ribonucleoprotein K	0	;;	172.94	1.0617e-06	247971000.0	12633.9	11805.599999999999	14027.8	13013.4	12353.5	11461.599999999999	11281.9	13791.599999999999	13402.0	13101.5	False	True	12078.528883404717	13756.274739110686	11083.556481229458	11872.535426606917	13978.201781272275	13676.391986531942	13812.153263165246	13306.541610846703	12778.94394523455	10728.691393869298	1.1258156694027714	1.282195025851097	1.0330762694472637	1.1066154287363739	1.302880404338953	1.274749313261732	1.2874033520115913	1.2402762948751112	1.191099965139908	1.0	13.389186497143626	-5.960821019627291	15.032463329030268	1.2002329575265933	0.8369971787076088	0.02711294542619147	0.10435102390600506	2920171.2893788917	33374441.19391251	0.02640422895086278	28323552.190319937	1.0944072977886035e-06	5.960821019627291	-0.3632357788189845	
GSDHSASLEPGELAELVR	ddPTM_K562_Methotrexat_30min_R1	2	GSDHSASLEPGELAELVR	18	0	Q9NR45;Q5TBR0;Q5TBR1	Q9NR45;Q5TBR1	NANS	Sialic acid synthase	0	;	149.31	4.0742e-12	14008000.0	2730.2	2708.3	2897.0	2668.0	2781.3	2669.2	2579.6	3004.9	3286.5	3334.2	False	True	2610.183677049174	3155.8005417711474	2288.959289847426	2434.100582337227	3147.0897004292383	3184.9851234078196	3158.1409654101767	2899.215963806465	3133.7113323394515	2730.3440709414203	0.9559907503339625	1.1558252219409952	0.8383409674291324	0.8914995762779272	1.1526348396611144	1.1665141977178135	1.1566824119427748	1.061850041048789	1.14773495607788	1.0	11.414867051984038	-7.771393560079849	24.97410378344312	1.122064817219551	0.9656525486286881	0.4093184431315512	0.09014387256018011	206.3403317841809	517687.0995944454	0.028598142955895828	0.032812043575280635	1.6928030775821548e-08	7.771393560079849	-0.156412268590863	
GSDYSWSYQT(ph)PPSS(ph)PSSSSSRK	ddPTM_K562_Methotrexat_30min_R1	1	GSDYSWSYQTPPSSPSSSSSRK	22	1	Q765P7;A0A087WXN9;H3BPV0	Q765P7	MTSS1L	MTSS1-like protein	2	GSDYS(0.005)WS(0.018)Y(0.001)QT(0.973)PPS(0.324)S(0.659)PS(0.008)S(0.003)S(0.002)S(0.002)S(0.004)RK	73.212	0.0072548000000000005	15072000.0	1319.1	1229.2	1995.1	1755.4	1244.5	1079.4	1368.7	1411.4	1398.6	1998.2	True	False	1261.1139434457427	1432.304407172431	1576.3557746546774	1601.5068074343212	1408.1735635077787	1287.9787734925826	1675.6658161563446	1361.760262010864	1333.5793912703352	1636.306617046112	0.77070759862985	0.8753276386292752	0.9633620974413347	0.97873270861997	0.8605804980791663	0.7871255668559621	1.02405368205458	0.8322158254601062	0.8149935821183287	1.0	10.676227395682739	-12.399736884992182	3.5355999446730295	1.000877865733662	0.8836086944090777	0.166827717176115	0.08070796964262292	136790602.6462685	234833968.28252724	1260066.4361606692	0.02054822787757737	3.9834843474765367e-13	12.399736884992182	-0.11726917132458436	
GSEGSQS(ph)PGSSVDDAEDDPSR	ddPTM_K562_Methotrexat_30min_R1	2	GSEGSQSPGSSVDDAEDDPSR	21	0	Q8IX07	Q8IX07	ZFPM1	Zinc finger protein ZFPM1	1	GSEGSQS(0.717)PGS(0.217)S(0.066)VDDAEDDPSR;GSEGS(0.011)QS(0.987)PGS(0.001)S(0.001)VDDAEDDPSR	236.6	1.6175e-63	62244000.0	2763.2	3036.8999999999996	3423.5	2584.8999999999996	3105.0	2399.4	2350.8	3027.6	3032.9	2976.2	True	False	2641.73303656226	3538.696106526157	2704.9541348956373	2358.285830316153	3513.3619242198906	2863.0500918270345	2878.0267411560853	2921.117591939984	2891.9011409865598	2437.1813400323485	1.083929617041626	1.4519625800512606	1.1098698691250175	0.9676283793822463	1.4415677104163525	1.1747382292813031	1.1808832990317764	1.1985639082158785	1.1865761047342402	1.0	11.250997884361913	-11.232494429487017	0.737164894299067	0.9896947254576396	1.2076266347112459	0.15311510746236	0.14090711715256252	16.883047180637348	8.105073837910789	0.6528111021939723	0.04933818436826941	5.854712458662791e-12	11.232494429487017	0.21793190925360628	
GSEGYLAATYPTVGQT(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	1	GSEGYLAATYPTVGQTSPR	19	0	H0Y465;P21359-2;P21359-6;P21359;J3QSG6	H0Y465	NF1	Neurofibromin;Neurofibromin truncated	1	GSEGYLAATYPT(0.001)VGQT(0.5)S(0.5)PR	178.51	1.8626e-11	11896000.0	2116.9	1874.9	2297.8	1946.8	2067.3	1849.5	1913.3	2280.0	2351.1	2264.3	True	False	2023.8436107044893	2184.695357149031	1815.523181294932	1776.1270666019911	2339.1861854878507	2206.8896994390684	2342.406229306593	2199.811107683699	2241.7978741710913	1854.2133284843917	1.0914836926335498	1.178233013207154	0.9791339288769516	0.9578871208167686	1.2615518125953011	1.1902026943377382	1.2632884217379903	1.1863851229468803	1.2090291013081573	1.0	10.856591521204484	-7.770031253292905	24.999998492968817	1.1985623850032623	1.0555414372736633	0.3428918080094604	0.08923646274855113	201.88238749561177	587420.5495437755	0.02747705849693712	0.03164802741760042	1.6981214455288938e-08	7.770031253292905	-0.14302094772959895	
GSEGYLAATYPTVGQTS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	5	GSEGYLAATYPTVGQTSPR	19	0	H0Y465;P21359-2;P21359-6;P21359;J3QSG6	H0Y465	NF1	Neurofibromin;Neurofibromin truncated	1	GSEGYLAATYPTVGQT(0.041)S(0.959)PR;GSEGYLAAT(0.001)YPT(0.001)VGQT(0.098)S(0.901)PR;GSEGYLAAT(0.003)Y(0.001)PT(0.01)VGQT(0.203)S(0.783)PR;GSEGYLAATYPTVGQT(0.026)S(0.974)PR;GSEGYLAATYPTVGQT(0.005)S(0.995)PR	257.88	2.274199999999999e-99	654103700.0	25463.6	23545.3	26428.5	26852.8	26368.4	24091.899999999998	24435.2	26624.0	27371.800000000003	27955.5	True	False	24344.25063325375	27435.76062332985	20881.519016821778	24498.65671566157	29836.306783445983	28747.318707713464	29915.415614045105	25687.618829373154	26099.29099240196	22892.48805566639	1.063416548435329	1.1984612837458226	0.9121559424229184	1.0701613846467695	1.3033230250418695	1.255753356201834	1.3067786927004812	1.1220981645555521	1.1400810138652369	1.0	14.482586649367589	-6.239372208872397	21.994405665690195	1.1530221547840351	1.0634160552381182	0.03597421595086292	0.1217669204306334	4177.6376737214405	4163519.224175158	0.032503654712318905	1.2265359608370665	5.762723617255928e-07	6.239372208872397	-0.08960609954591692	
GSEMDNNCS(ph)PTRK	ddPTM_K562_Methotrexat_30min_R1	1	GSEMDNNCSPTRK	13	1	O95243-3;O95243-5;O95243-2;O95243	O95243-3	MBD4	Methyl-CpG-binding domain protein 4	1	GSEMDNNCS(0.997)PT(0.003)RK	88.021	0.006505500000000001	0.0	390.04	187.99	489.32	221.27	314.28	191.23	298.47	285.65	479.7	345.21	True	False	372.894308620709	219.05215221635643	386.61841895344907	201.87160264383746	355.6133286775611	228.18249106446768	365.4094952496417	275.6035275920388	457.39885170340324	282.6891238467061	1.3190967644829468	0.7748870888118848	1.3676451845494444	0.7141116711419943	1.2579660789157197	0.8071852498584426	1.2926195754449767	0.9749350234694222	1.6180277666127583	1.0	8.143072567905739	-9.710335999033715	24.999989515783806	1.3090299106973857	1.0579917147861355	0.11805826592246793	0.268008420786814	170.27601513312197	83299.57720454366	0.16152310075817441	0.061049790938417677	1.9483366539704005e-10	9.710335999033715	-0.2510381959112502	
GSES(ph)PNSFLDQESR	ddPTM_K562_Methotrexat_30min_R1	1	GSESPNSFLDQESR	14	0	A0A5H1ZRR2;Q5T4Y8;G9CGD6-3;G9CGD6;G9CGD6-2;Q6P9H4	A0A5H1ZRR2	CNKSR3	Connector enhancer of kinase suppressor of ras 3	1	GSES(0.926)PNS(0.074)FLDQESR	222.75	1.8084e-27	35661000.0	1359.1	1418.5	1326.8	1218.4	1063.2	1581.9	1168.8	1630.9	1554.6	1331.4	True	False	1299.3555913403902	1652.8830146225944	1048.32281179481	1111.5847636880355	1203.029435694231	1887.5797867221752	1430.9331525707137	1573.5403225970806	1482.3269853202232	1090.2705584702203	1.1917735292820721	1.5160301282846584	0.9615253788616762	1.0195494641694458	1.1034228397235866	1.7312948350826558	1.3124569323219033	1.4432567314345766	1.35959553690976	1.0	10.09047047923056														
GSET(ph)PGATPGSK	ddPTM_K562_Methotrexat_30min_R1	4	GSETPGATPGSK	12	0	O75533	O75533	SF3B1	Splicing factor 3B subunit 1	1	GSET(1)PGATPGSK;GSET(1)PGATPGSK;GS(0.083)ET(0.913)PGAT(0.004)PGSK;GS(0.079)ET(0.921)PGATPGSK	212.1	7.4329e-17	73396200.0	22865.199999999997	18578.5	29569.7	27093.199999999997	18684.8	17415.9	17359.4	23052.5	23689.7	26516.9	True	False	21860.073186017427	21648.281344494804	23363.424063859668	24717.98122090667	21142.178705849863	20781.276191652272	21252.68734491448	22241.73050871863	22588.371017715494	21714.4324559854	1.0067070935575793	0.9969535878211562	1.075939889804476	1.1383203899530594	0.9736463869688752	0.9570259887646333	0.9787355662181425	1.0242832988521366	1.040246898623832	1.0	14.406366625519448														
GSFS(ph)DTGLGDGK	ddPTM_K562_Methotrexat_30min_R1	1	GSFSDTGLGDGK	12	0	Q9Y2W1;A0A3B3ITZ9	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	1	GSFS(0.77)DT(0.23)GLGDGK	187.62	0.00019849	301670000.0	4262.0	3148.6	4879.5	4410.7	3083.4	3075.4	2641.5	4050.9	3757.3	4263.8	True	False	4074.6475831747052	3668.8526329507927	3855.359632312914	4024.0207790535255	3488.92114561662	3669.6775245498284	3233.9236161152803	3908.4275509280224	3582.6239431002673	3491.584502933246	1.1669909692151612	1.0507701102088824	1.1041862595833107	1.1524913046420573	0.9992372066852776	1.0510063615722227	0.9262051694290924	1.1193850664775808	1.0260739615754795	1.0	11.769666173748975	-7.7676610941328	24.999604426325288	1.0231159887139356	1.1127337382652085	0.44243315700557684	0.053840211505081476	153.017457993469	614841.1249010159	0.01631017666052233	0.018949542015654745	1.70741426637398e-08	7.7676610941328	0.08961774955127289	
GSFSGRLS(ph)PAYS(ph)LGSLTGASPCQSPCVQR	ddPTM_K562_Methotrexat_30min_R1	1	GSFSGRLSPAYSLGSLTGASPCQSPCVQR	29	1	Q86UU1-3;Q86UU1-2;Q86UU1	Q86UU1-3	PHLDB1	Pleckstrin homology-like domain family B member 1	2	GS(0.045)FS(0.022)GRLS(0.811)PAY(0.365)S(0.577)LGS(0.14)LT(0.02)GAS(0.014)PCQS(0.005)PCVQR	58.272	0.0058235	18096000.0	1050.1	847.71	1088.1	1174.8	1393.8	1084.3	894.36	1386.9	1162.7	1224.3	True	False	1003.9388613542368	987.7796688937043	859.7226797663047	1071.8071079946685	1577.109130427596	1293.8256291439754	1094.942996520486	1338.121940897596	1108.6463307807953	1002.5674062904393	1.0013679429983386	0.9852501315084135	0.8575210747647694	1.0690623904884564	1.5730704195371723	1.290512359594064	1.0921390318999518	1.3346952359529909	1.1058072742289264	1.0	9.96948352229165	-7.530916994202881	24.960158621854763	1.2521887634398445	0.953687543641315	0.4115584170292512	0.15310169488810052	164.293975131131	510158.3279698737	0.04472329685018911	0.05784018108084056	2.9449844487380695e-08	7.530916994202881	-0.2985012197985295	
GSFSGRLS(ph)PAYSLGSLT(ph)GASPCQSPCVQR	ddPTM_K562_Methotrexat_30min_R1	1	GSFSGRLSPAYSLGSLTGASPCQSPCVQR	29	1	Q86UU1-3;Q86UU1-2;Q86UU1	Q86UU1-3	PHLDB1	Pleckstrin homology-like domain family B member 1	2	GS(0.025)FS(0.075)GRLS(0.863)PAY(0.029)S(0.009)LGS(0.01)LT(0.556)GAS(0.217)PCQS(0.217)PCVQR	54.273	0.010442	15978000.0	910.21	1109.8	1022.9	1161.7	1072.5	1069.6	1260.8	1283.3	1285.4	1317.9	True	False	870.1982582546807	1293.175586625418	808.2072687555855	1059.8555646556056	1213.5525487039724	1276.285062189795	1543.566494491064	1238.1656116186361	1225.6420345623412	1079.2155392878951	0.8063248040598716	1.198255158074078	0.7488840174492571	0.9820610675740788	1.1244765336725207	1.1826044156405804	1.4302671137496448	1.1472829722555904	1.1356786387370437	1.0	10.075767311126311	-7.83525561106202	2.828741645936185	1.2007186600902442	0.9350871337858846	0.3794968235757685	0.14886394423218055	0.27082647961484385	4.400537875961993	0.04808290407546094	0.05763259283331014	1.461316839569562e-08	7.83525561106202	-0.2656315263043596	
GSGDISSDSIDHS(ph)PAK	ddPTM_K562_Methotrexat_30min_R1	1	GSGDISSDSIDHSPAK	16	0	Q5JSS2;H0Y306;Q9H5I1-3;Q9H5I1-2;Q9H5I1	Q5JSS2	SUV39H2	Histone-lysine N-methyltransferase SUV39H2	1	GSGDISS(0.002)DS(0.008)IDHS(0.99)PAK	85.97399999999999	0.013147999999999998	0.0	1171.2	922.2	1500.9	961.53	1034.7	798.73	865.57	912.65	1127.0	1136.5	True	False	1119.7154503552836	1074.5778752801955	1185.8816010120815	877.2341577716315	1170.7811861482521	953.0732682524832	1059.6961061521502	880.5515822050558	1074.6060159886092	930.6688370898344	1.2031298413908331	1.1546296947476604	1.2742251096751962	0.9425846475258686	1.2579997733772195	1.0240734730440815	1.1386392924316442	0.9461492070138575	1.1546599318280182	1.0	9.862124090017604	-4.1035012300024345	0.1657909389034565	0.9859634103667604	1.6670987735328513	0.23459933626749851	0.10229280679976868	59.8485277520154	0.8784865951389488	0.2803213417275739	9.377288083060407	7.879501998272208e-05	4.1035012300024345	0.6811353631660909	
GSGFTVTGGTEELPEEEGGGGS(ph)GGRR	ddPTM_K562_Methotrexat_30min_R1	3	GSGFTVTGGTEELPEEEGGGGSGGRR	26	1	Q7Z3Z5;Q93074-3;Q93074;Q93074-2	Q7Z3Z5	TNRC11;MED12	Mediator of RNA polymerase II transcription subunit 12	1	GSGFTVTGGTEELPEEEGGGGS(1)GGRR;GSGFTVTGGTEELPEEEGGGGS(1)GGRR;GSGFTVTGGTEELPEEEGGGGS(1)GGRR	119.01	1.95e-09	52907000.0	2141.89	2022.2800000000002	2364.4500000000003	2047.1200000000001	2261.16	2289.08	2352.13	2400.06	2169.4300000000003	2527.68	True	False	2047.7350802266708	2356.427397117363	1868.1842571210727	1867.6521679588388	2558.542173452188	2731.4123131613856	2879.6550275121085	2315.6485294330414	2068.57367281825	2069.892658280011	0.9892953009110376	1.138429757548611	0.902551274650856	0.9022942134162527	1.2360748095885432	1.3195912851978846	1.3912098368931722	1.1187287998582702	0.9993627759118404	1.0	11.01534023819225	-7.769993837324293	24.991339572906462	1.201221647396157	0.9884780432422333	0.3303821173089766	0.13291393796604853	214.46468284375186	626544.3073158944	0.04370280593006625	0.0503349901258497	1.6982677508548692e-08	7.769993837324293	-0.21274360415392368	
GSGGLFS(ph)PSTAHVPDGALGQR	ddPTM_K562_Methotrexat_30min_R1	4	GSGGLFSPSTAHVPDGALGQR	21	0	Q9C0C2;Q9C0C2-2	Q9C0C2	TNKS1BP1	182 kDa tankyrase-1-binding protein	1	GS(0.494)GGLFS(0.506)PSTAHVPDGALGQR;GS(0.084)GGLFS(0.91)PS(0.003)T(0.003)AHVPDGALGQR;GS(0.273)GGLFS(0.696)PS(0.016)T(0.016)AHVPDGALGQR;GS(0.058)GGLFS(0.92)PS(0.015)T(0.007)AHVPDGALGQR	159.5	9.3264e-45	29715500.0	4146.43	3443.6099999999997	4403.99	4656.23	3390.56	3262.5	3623.63	3937.6399999999994	3850.13	4740.150000000001	True	False	3964.157901995094	4012.6080211381845	3479.6526830842795	4248.025545163442	3836.4780694953283	3892.931951565264	4436.321269378692	3799.150969324401	3671.138296662134	3881.662902007373	1.02125248947946	1.0337342841036232	0.8964335056722219	1.0943829107279273	0.9883594135676549	1.0029031499752499	1.1428919464089686	0.9787431482934025	0.94576432558418	1.0	11.922459119169362														
GSGHSQEQPAPQPS(ph)GGDPSPPQER	ddPTM_K562_Methotrexat_30min_R1	2	GSGHSQEQPAPQPSGGDPSPPQER	24	0	Q8WXE0-2;Q8WXE0	Q8WXE0-2	CASKIN2	Caskin-2	1	GSGHSQEQPAPQPS(0.75)GGDPS(0.25)PPQER;GSGHSQEQPAPQPS(0.978)GGDPS(0.022)PPQER	173.11	4.454500000000001e-25	13735400.0	1989.8899999999999	2506.73	2595.6000000000004	2405.65	2317.33	2205.9	2361.7	2160.4300000000003	2580.3	2728.3	True	False	1902.4168182270098	2920.9245253753234	2050.8190309727233	2194.750399512576	2622.0995129959665	2632.1589553893705	2891.371343622736	2084.4464523566194	2460.342416198231	2234.1784322324615	0.8515062139983398	1.3073819365701438	0.9179298311117793	0.9823523349115462	1.173630304172206	1.178132828343184	1.294154174039531	0.9329811899910674	1.1012291501443685	1.0	11.12552869564764	-6.213243610818949	22.501850115438845	1.0982048510682925	0.851502318117807	0.2368579098339596	0.13307958806056341	17506.50093965004	8172769.358029646	0.03320326880686106	19.307146213829217	6.120069994974148e-07	6.213243610818949	-0.2467025329504855	
GSGHSQEQPAPQPSGGDPS(ph)PPQER	ddPTM_K562_Methotrexat_30min_R1	1	GSGHSQEQPAPQPSGGDPSPPQER	24	0	Q8WXE0-2;Q8WXE0	Q8WXE0-2	CASKIN2	Caskin-2	1	GSGHSQEQPAPQPS(0.157)GGDPS(0.843)PPQER	99.09299999999999	2.024e-06	6944800.0	2508.9	1818.2	2609.3	2205.3	1844.6	1779.4	2005.6	2293.8	2098.4	2307.2	True	False	2398.611760072036	2118.6266458842456	2061.6435881943016	2011.964772949132	2087.1972320180375	2123.243866548731	2455.4068538636416	2213.1257538617847	2000.845842014637	1889.3437227748927	1.2695475847820732	1.121355855128681	1.0911956164156043	1.0649013986688165	1.1047207593081876	1.1237996776099097	1.299608337151785	1.1713727508572929	1.059016322914488	1.0	10.883669475553216	-9.937475179285414	4.026598681647616	1.0013130636017813	1.1511434127638736	0.34356877010888753	0.0717310880141114	0.2401687183005097	7.649944084482645	0.07437168712731425	0.019585029272244224	1.1548479844530244e-10	9.937475179285414	0.14983034916209226	
GSGSQS(ph)SVPSVDQFTGVGIR	ddPTM_K562_Methotrexat_30min_R1	1	GSGSQSSVPSVDQFTGVGIR	20	0	Q9UQE7	Q9UQE7	SMC3	Structural maintenance of chromosomes protein 3	1	GSGS(0.13)QS(0.868)S(0.001)VPS(0.001)VDQFTGVGIR	165.66	7.051899999999999e-13	20566000.0	1252.9	1033.4	1458.0	926.39	1072.4	1071.1	935.05	1276.3	1529.6	1317.7	True	False	1197.8240161801014	1204.1517852033758	1151.9857247488937	845.1748270132622	1213.439396951179	1278.0749159606298	1144.758764811128	1231.4118055862737	1458.4892298635104	1079.0517612259341	1.110070952313935	1.1159351464616607	1.0675907923453993	0.783256983013531	1.1245423440786235	1.1844426392563236	1.0608932823672357	1.1411980869084908	1.3516397287619355	1.0	10.075548356043042	-7.976426363498459	24.99996287412604	1.1514222085913044	1.0201179401711837	0.20260495323828454	0.12166978867574815	383.39194785592036	406587.2832518817	0.03858156542591275	0.04374520355282794	1.055780500175657e-08	7.976426363498459	-0.13130426842012066	
GSGTAS(ph)DDEFENLR	ddPTM_K562_Methotrexat_30min_R1	4	GSGTASDDEFENLR	14	0	Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7	Q7Z6Z7-2	HUWE1	E3 ubiquitin-protein ligase HUWE1	1	GS(0.001)GT(0.078)AS(0.922)DDEFENLR;GSGT(0.023)AS(0.977)DDEFENLR;GSGT(0.003)AS(0.997)DDEFENLR;GSGT(0.138)AS(0.862)DDEFENLR	249.58	8.406299999999997e-75	1123460000.0	9104.7	8261.599999999999	10961.3	9975.400000000001	8665.800000000001	8514.6	8317.5	9873.8	9280.800000000001	11004.9	True	False	8704.468289659959	9626.688976810728	8660.672925027467	9100.872169807635	9805.5045935281	10159.92594476555	10182.911102418648	9526.532857476886	8849.33763370637	9011.805970338684	0.9658961054321085	1.0682308305899906	0.9610363287373329	1.009883279751262	1.088073203728729	1.1274017636648823	1.1299523243104124	1.0571169517888386	0.9819716117760345	1.0	13.137600536468492	-7.718262016763143	7.270274053928817	1.073377731324419	1.002733762155333	0.24392462585903563	0.05269180639640633	0.2898225370422282	38.90347181820825	0.016167322791741687	0.02070664978570407	1.9131013723134088e-08	7.718262016763143	-0.07064396916908611	
GSHSLLPNQVPVPQLPVQS(ph)ATSPDLNPPQDPYR	ddPTM_K562_Methotrexat_30min_R1	1	GSHSLLPNQVPVPQLPVQSATSPDLNPPQDPYR	33	0	E9PH57;P15884-5;A0A1B0GVR6;P15884-15;H3BTP3;H3BPJ7;A0A1B0GVB8;P15884-10;P15884-4;P15884-14;P15884-13;P15884-12;P15884;P15884-3;A0A1B0GW91;P15884-2;A0A1B0GWD5;P15884-16;P15884-8;P15884-6;P15884-9;P15884-7;P15884-11	E9PH57	TCF4	Transcription factor 4	1	GSHSLLPNQVPVPQLPVQS(0.387)AT(0.306)S(0.306)PDLNPPQDPY(0.001)R	67.913	4.1087e-05	44982000.0	3140.9	2702.5	3222.7	2826.1	3125.4	2693.9	2719.4	3494.3	3167.1	3067.4	True	False	3002.82979680747	3149.042190354292	2546.299310801277	2578.340200803312	3536.4448817896455	3214.45804883423	3329.2946741108817	3371.403488411907	3019.8622122781912	2511.864136286279	1.195458684818467	1.2536674037673323	1.0137090115733367	1.0264648328533073	1.4078965620402466	1.2797101572486784	1.3254278469985845	1.3421918167104503	1.2022394717347147	1.0	11.294542717360219	-7.754851187059694	24.999995098918195	1.2809863709439884	1.1239483155801995	0.2199192043240914	0.12271103375046664	212.33114703254114	805721.5385393149	0.03611126093084948	0.04552718814080345	1.758526077534346e-08	7.754851187059694	-0.1570380553637889	
GSHSLLPNQVPVPQLPVQSAT(ph)SPDLNPPQDPYR	ddPTM_K562_Methotrexat_30min_R1	1	GSHSLLPNQVPVPQLPVQSATSPDLNPPQDPYR	33	0	E9PH57;P15884-5;A0A1B0GVR6;P15884-15;H3BTP3;H3BPJ7;A0A1B0GVB8;P15884-10;P15884-4;P15884-14;P15884-13;P15884-12;P15884;P15884-3;A0A1B0GW91;P15884-2;A0A1B0GWD5;P15884-16;P15884-8;P15884-6;P15884-9;P15884-7;P15884-11	E9PH57	TCF4	Transcription factor 4	1	GSHSLLPNQVPVPQLPVQS(0.109)AT(0.446)S(0.446)PDLNPPQDPYR	79.286	1.3085e-05	40329000.0	2311.6	2404.7	2421.4	2513.4	2367.8	2134.8	2343.2	2709.9	2637.5	2871.6	True	False	2209.9848318316863	2802.0358020887943	1913.1812303888712	2293.054124305241	2679.2072026305486	2547.319886651811	2868.7222476931015	2614.5912810140576	2514.88320068319	2351.525413627071	0.9398090358814929	1.191582189948286	0.8135915603131487	0.9751347406313412	1.139348606272577	1.0832627501663867	1.2199409927993459	1.1118703059139918	1.0694688588562393	1.0	11.199381208572047	-7.756934900563408	24.990372867849807	1.114337435033137	0.9832518565485857	0.26192896082151884	0.10098264690184605	151.69884574913195	841603.6443154601	0.02992109098180046	0.03731157886970662	1.7501090050399256e-08	7.756934900563408	-0.13108557848455127	
GSISSTSEVHS(ph)PPNVGLR	ddPTM_K562_Methotrexat_30min_R1	1	GSISSTSEVHSPPNVGLR	18	0	Q8WWQ0	Q8WWQ0	PHIP	PH-interacting protein	1	GSISS(0.009)T(0.009)S(0.009)EVHS(0.973)PPNVGLR	77.668	0.009314399999999999	17022000.0	1812.6	2027.4	2374.8	2069.2	2064.5	2025.1	1637.2	1882.4	1823.9	1810.7	True	False	1732.9202743459573	2362.3933900922448	1876.3619335621906	1887.7964486402516	2336.0179364096493	2416.421914211438	2004.383775999976	1816.1949250455225	1739.1072870999335	1482.7646839582594	1.1687088943337283	1.5932355387544066	1.2654482224065509	1.2731598405761557	1.5754475148232014	1.6296732316019078	1.351788181688579	1.2248706384057966	1.172881513779627	1.0	10.53407394366592	-9.656515175589394	1.5172142374847983	1.027339020744133	1.42007491058245	0.45465771707255953	0.14726316551119348	0.356207226014004	1.5318502493515849	0.14016614501599187	0.043941623460095704	2.2053870720163864e-10	9.656515175589394	0.39273588983831687	
GSISSTSEVHS(ph)PPNVGLRR	ddPTM_K562_Methotrexat_30min_R1	1	GSISSTSEVHSPPNVGLRR	19	1	Q8WWQ0	Q8WWQ0	PHIP	PH-interacting protein	1	GSISSTSEVHS(1)PPNVGLRR	73.346	0.0098271	12009000.0	1208.6	2508.8	2281.3	2112.8	1441.4	1083.9	1148.5	1631.3	1478.0	2634.0	True	False	1155.4713911367787	2923.336557691339	1802.4863058090903	1927.574104333618	1630.969364757022	1293.3483348050854	1406.080360820898	1573.9262543703578	1409.2881026008554	2156.9570760181455	0.5356951253150752	1.355305856659869	0.8356616484629232	0.8936543641804962	0.7561436353512774	0.5996170944637774	0.6518814752756208	0.7296975317079128	0.6533686359686277	1.0	11.07478175145627	-7.704686067006354	2.327035351198338	0.7028741253725406	0.9471340669547014	0.1264092579063959	0.2128711955134028	0.46412526184394937	5.14367300710153	0.06616852230742329	0.08767845209572152	1.9738490319896344e-08	7.704686067006354	0.2442599415821608	
GSKS(ph)PDLLMYQGPPDTAEIIK	ddPTM_K562_Methotrexat_30min_R1	1	GSKSPDLLMYQGPPDTAEIIK	21	1	P82909	P82909	MRPS36	28S ribosomal protein S36, mitochondrial	1	GS(0.229)KS(0.77)PDLLMYQGPPDTAEIIK	92.463	0.00056391	9966800.0	1537.7	1240.5	2160.0	1466.0	952.23	919.43	916.63	1206.4	1365.4	2065.4	True	False	1470.1045491899913	1445.4715401052727	1706.6455181465112	1337.478056111834	1077.4649356199382	1097.096835012308	1122.207610917944	1163.9702282059707	1301.9228520238214	1691.3360458647971	0.8691971963728309	0.8546329652462343	1.009051703426498	0.7907819734474871	0.6370495906205437	0.6486569228478491	0.6635036329188786	0.6881957202129048	0.7697600102634454	1.0	10.723947617110552	-7.503007825716472	7.900337198065237	0.7111912958453124	0.9048319826139606	0.3411361021710262	0.10663509530244983	0.1912714327775753	60.34573518291109	0.029126137748923038	0.04135625469247835	3.1404521043725196e-08	7.503007825716472	0.1936406867686482	
GSLAEAVGSPPPAAT(ph)PTPTPPTR	ddPTM_K562_Methotrexat_30min_R1	2	GSLAEAVGSPPPAATPTPTPPTR	23	0	Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1	Q9Y6I3-3	EPN1	Epsin-1	1	GSLAEAVGSPPPAAT(0.814)PT(0.133)PT(0.045)PPT(0.009)R;GSLAEAVGSPPPAAT(0.877)PT(0.123)PTPPTR	191.71	2.7927e-21	51604000.0	8376.2	7263.0	6950.2	8766.6	7765.4	7364.0	8658.7	8461.8	8728.3	9526.5	True	False	8007.992277378685	8463.0873001085	5491.448000102718	7998.045789024566	8786.686211380724	8786.988778950685	10600.633887888462	8164.193697806103	8322.523238113023	7801.158536327592	1.026513208273865	1.0848500592185777	0.7039272403618945	1.0252382068355785	1.1263309379579756	1.1263697229113323	1.3588537956925981	1.0465360574058287	1.066831701901403	1.0	12.929472676649658	-7.6187360868966625	4.32111198274189	1.1346678671429227	0.940783346961713	0.28235208920096655	0.12891081453976147	0.2686899799259492	9.060727104935694	0.0397951680317115	0.052270107014040244	2.40582433293876e-08	7.6187360868966625	-0.19388452018120972	
GSLAS(ph)LDSLR	ddPTM_K562_Methotrexat_30min_R1	1	GSLASLDSLR	10	0	O60716;O60716-15;O60716-11;A0A669KB62;A0A669KB05;O60716-6;O60716-3;O60716-4;O60716-5;O60716-7;O60716-17;O60716-9;O60716-8;O60716-10;O60716-12;O60716-2;O60716-14;C9JZR2;O60716-13;O60716-18;O60716-22;O60716-19;O60716-21;O60716-23;O60716-24;O60716-16;O60716-20;O60716-29;O60716-26;O60716-32;O60716-31;O60716-25;O60716-27;O60716-30;O60716-28;E9PKY0	O60716	CTNND1	Catenin delta-1	1	GSLAS(0.936)LDS(0.064)LR	112.94	0.0026639	20321000.0	2345.6	2095.5	1826.6	2603.4	2037.5	2139.7	2084.8	2207.4	2377.0	2613.2	True	False	2242.490232542137	2441.745757590164	1443.2216219659326	2375.1639640392577	2305.4669631555644	2553.166742303203	2552.369469951596	2129.7644908337684	2266.4937888242453	2139.924157574267	1.047929771064473	1.141043129471481	0.6744265290233048	1.1099290391355032	1.0773591928458577	1.1931108554788088	1.1927382851011226	0.9952523239178648	1.0591467836848256	1.0	11.063343950713538														
GSLGIS(ph)QEEQ	ddPTM_K562_Methotrexat_30min_R1	2	GSLGISQEEQ	10	0	H3BRR0;Q9NZD8-2;Q9NZD8	H3BRR0	SPG21	Maspardin	1	GS(0.003)LGIS(0.997)QEEQ;GS(0.002)LGIS(0.998)QEEQ	101.93	0.005739800000000001	28761000.0	6374.6	6353.7	7313.6	6227.9	7117.4	6426.7	6214.5	7082.9	6848.200000000001	7125.9	True	False	6094.3802167305175	7403.540930565791	5778.57530625755	5681.909676438536	8053.462853282654	7668.5688193485075	7608.259819174114	6833.790392374065	6529.828676746401	5835.330458617198	1.0443933312689726	1.2687440725199672	0.990273875188022	0.9737082958254573	1.380121127740054	1.3141618754468505	1.303826728088515	1.1711059794878305	1.1190160905289634	1.0	12.510598643681023	-6.229221507723618	22.31033651714445	1.1780022402825299	1.0443923008788203	0.06339684617127295	0.1398738918446886	9446.460187014727	6541046.992173242	0.03695610787103	4.048696209428937	5.899001305419856e-07	6.229221507723618	-0.13360993940370958	
GSLKS(ph)S(ph)T(ph)S(ph)GSQK	ddPTM_K562_Methotrexat_30min_R1	1	GSLKSSTSGSQK	12	1	Q7Z4N2-5;A0A0G2JN34	Q7Z4N2-5			4	GS(0.02)LKS(0.95)S(0.956)T(0.956)S(0.663)GS(0.455)QK	69.345	0.027063999999999998	460920000.0	1163.7	1039.8	1095.2	1164.0	1243.7	1030.3	1111.9	1018.7	1104.7	1214.6	True	False	1112.5451413750359	1211.6092764219757	865.3324867935451	1061.9539272265858	1407.268349485436	1229.3908933939297	1361.2718791438876	982.8717435953439	1053.3427381212218	994.6241702853602	1.1185583204315697	1.2181578857814825	0.870009509768176	1.067693666565441	1.4148744737237655	1.2360356103564367	1.3686293977285262	0.9881840527898649	1.0590359349693013	1.0	9.958007680162465	-9.33774170790792	24.99967577707458	1.0177068887449972	1.1803369121797167	0.22137046844296304	0.14515382832686	229.0512839462791	75043.87448740022	0.08644057252056601	0.04152468144063214	4.594711972717412e-10	9.33774170790792	0.16263002343471955	
GSLLPTS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	5	GSLLPTSPR	9	0	Q9H0E9-3;H7C128;H7C179;Q9H0E9-4;H7C127;Q9H0E9-2	Q9H0E9-3	BRD8		1	GSLLPT(0.067)S(0.933)PR;GSLLPT(0.004)S(0.996)PR;GSLLPT(0.001)S(0.999)PR;GSLLPT(0.003)S(0.997)PR;GSLLPT(0.002)S(0.998)PR	117.71	0.004496899999999999	939436000.0	36084.200000000004	35100.3	39804.2	37743.9	37010.4	35386.299999999996	37199.3	39610.1	36046.0	36712.2	True	False	34497.98177400112	40900.02797191219	31449.842376577453	34434.950888185165	41877.91631566757	42224.201660589744	45542.189957583614	38216.990331781606	34370.22932770667	30063.264831508488	1.1475128189618555	1.3604652788424358	1.046121988175274	1.145416210820018	1.3929929616884613	1.4045115158728771	1.514878381068316	1.271218896083682	1.14326336545072	1.0	14.875714072119061	-6.221995219046619	21.48130161425901	1.2691170354758354	1.1475107832937623	0.029512256717730057	0.15991131498919997	12044.985980497619	6558878.766977246	0.04154237152408737	8.178556733610133	5.99797679123097e-07	6.221995219046619	-0.1216062521820731	
GSLPQLVS(ph)PIVSR	ddPTM_K562_Methotrexat_30min_R1	1	GSLPQLVSPIVSR	13	0	F5H1U9;O75970-5;O75970-3;O75970-2;O75970	F5H1U9	MPDZ	Multiple PDZ domain protein	1	GSLPQLVS(1)PIVSR	81.992	0.03349	28797000.0	1196.0	1182.1	1642.9	1264.5	1229.5	1257.4	1162.4	1541.7	1207.9	1508.7	True	False	1143.4252720499642	1377.4219327355438	1298.077741556898	1153.6432482629027	1391.2008005888417	1500.374754298288	1423.0977896545162	1487.4775371561207	1151.7449926465313	1235.4598103980932	0.9255058419759739	1.1149063054440493	1.0506839078307435	0.9337764276534197	1.1260591310862353	1.2144261931230553	1.1518770401733762	1.2039869890035693	0.9322399506264901	1.0	10.270832365112334	-7.796164557108784	24.825748098159576	1.1228029924310996	1.0171576757427683	0.1828963409272829	0.09657520677744937	258.8715497030599	185071.18467980108	0.029563711008048468	0.033523589365724256	1.5989520600976254e-08	7.796164557108784	-0.10564531668833133	
GSLPQLVSPIVS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	GSLPQLVSPIVSR	13	0	F5H1U9;O75970-5;O75970-3;O75970-2;O75970	F5H1U9	MPDZ	Multiple PDZ domain protein	1	GSLPQLVS(0.096)PIVS(0.904)R	161.82	2.9354e-05	35695000.0	1523.9	1421.7	1539.9	1743.4	1529.2	1469.3	1449.3	1576.5	1308.6	1495.3	True	False	1456.9111806663389	1656.6117602318943	1216.6960339786165	1590.5588288031197	1730.3166037091962	1753.2214303248572	1774.3424178822174	1521.0536014312945	1247.7634716261703	1224.4866802467484	1.189813824983996	1.3529030466040413	0.9936376226921783	1.2989596820135303	1.413095488601409	1.4318011446000887	1.4490499949943652	1.2421969352290418	1.019009427995355	1.0	10.257961365263466	-9.719566337130976	3.9483313168785923	0.9996391565649543	1.3053550045814182	0.45473074896433996	0.1271119662451414	0.20703967654925787	6.439564720126889	0.11587389271072936	0.0356477447812709	1.9073643577663504e-10	9.719566337130976	0.3057158480164639	
GSLSPRS(ph)PVSSLQIR	ddPTM_K562_Methotrexat_30min_R1	2	GSLSPRSPVSSLQIR	15	1	Q5JT35;P55197-1;P55197	Q5JT35	MLLT10	Protein AF-10	1	GSLSPRS(0.916)PVS(0.013)S(0.071)LQIR;GSLS(0.024)PRS(0.967)PVS(0.009)SLQIR	124.2	0.0012227	19181400.0	3661.3999999999996	3448.14	3698.4	3756.7	3518.0	3139.7	2994.79	3997.2	3668.6	4117.5	True	False	3500.4492400365693	4017.8865266413477	2922.1563816264124	3427.3559436530227	3980.6786632546127	3746.402589526274	3666.4478918439836	3856.6162103654724	3498.047586739849	3371.78085060923	1.0381603654354021	1.19162149162671	0.8666507436562559	1.0164824155264276	1.1805864140118607	1.1111050081589244	1.0873921094787378	1.1437920734583447	1.0374480850698835	1.0	11.719295055813472														
GSLTGS(ph)ETDNEDVYTFK	ddPTM_K562_Methotrexat_30min_R1	1	GSLTGSETDNEDVYTFK	17	0	Q9UQC2;Q9UQC2-2	Q9UQC2	GAB2	GRB2-associated-binding protein 2	1	GS(0.008)LT(0.129)GS(0.826)ET(0.035)DNEDVY(0.001)TFK	78.22800000000001	0.01884	8297100.0	338.21	254.19	296.94	255.36	247.0	244.01	173.94	265.69	193.36	269.12	True	False	323.3426933612195	296.19057700875385	234.6163519251965	232.97298527197697	279.48482939849055	291.16147908090124	212.9504727568018	256.3455321054745	184.37073580439886	220.37976017388144	1.4672068483335288	1.3440008137546617	1.0646002688272385	1.0571432925063506	1.268196449519569	1.3211806694551824	0.9662887035941147	1.1631990701106842	0.8366046666850387	1.0	7.7838479216801755	-3.0000000000000004	0.30268258862079606	1.0187383997952906	4.668185624383958	0.48377907130561115	0.13481364418933156	53.340345666920776	0.7611324533757715	0.14330451238087583	105.72885997563212	0.000999999999999999	3.0000000000000004	3.6494472245886675	
GSLVGLVDYPDDEEEDEEEESS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	3	GSLVGLVDYPDDEEEDEEEESSPR	24	0	Q5MIZ7-5;Q5MIZ7-3;Q5MIZ7-2;Q5MIZ7	Q5MIZ7-5	SMEK2	Serine/threonine-protein phosphatase 4 regulatory subunit 3B	1	GSLVGLVDYPDDEEEDEEEES(0.099)S(0.901)PR;GSLVGLVDYPDDEEEDEEEES(0.077)S(0.923)PR;GSLVGLVDYPDDEEEDEEEES(0.096)S(0.904)PR	216.49	3.497299999999999e-131	9500500.0	5953.3	5469.1	6649.799999999999	5573.1	6089.5	6089.799999999999	6037.6	6900.3	6885.6	6646.9	True	False	5691.600060280143	6372.775816194873	5254.097854893822	5084.514975795955	6890.375986324324	7266.567662419052	7391.685491068565	6657.612537872725	6565.489958909641	5443.0820002221	1.0456575998759348	1.170802831178152	0.9652799378512823	0.9341242655518485	1.2658960467696736	1.3350097724271923	1.357996350370425	1.2231328753821946	1.2062081663737094	1.0	12.410208055140428	-7.776372547505443	24.885927263705973	1.254043485378791	1.0345483387780279	0.44452881030717195	0.1090210259863253	193.89852527298476	323127.9248365661	0.03401139087607769	0.03871971656635944	1.6735066887066257e-08	7.776372547505443	-0.21949514660076308	
GSMSDS(ph)ANILDEVPFPAR	ddPTM_K562_Methotrexat_30min_R1	1	GSMSDSANILDEVPFPAR	18	0	A6PVC3;Q15049-2;Q15049	A6PVC3	MLC1	Membrane protein MLC1	1	GS(0.005)MS(0.03)DS(0.965)ANILDEVPFPAR	67.605	0.032236	23145000.0	485.35	363.85	482.02	491.01	380.97	294.83	310.68	440.53	423.93	515.36	True	False	464.01459514168056	423.9700281074593	380.85058919304663	447.96391564220454	431.07423261515333	351.80172483677774	380.35789856320093	425.03631020521925	404.2215868305686	422.0233100594959	1.0994999187989518	1.0046128211441425	0.9024396996918373	1.0614672340706763	1.0214464991385936	0.8336073303324917	0.901272250837469	1.0071394164111422	0.9578181517357	1.0	8.721178876807846														
GSQAWVLSCS(ph)PSSQGQHK	ddPTM_K562_Methotrexat_30min_R1	1	GSQAWVLSCSPSSQGQHK	18	0	Q6PCD5	Q6PCD5	RFWD3	E3 ubiquitin-protein ligase RFWD3	1	GSQAWVLS(0.2)CS(0.799)PSSQGQHK	98.3	0.00093262	13885000.0	2536.6	1838.1	2933.5	2253.5	2292.3	1920.5	1989.5	2252.4	2680.2	3092.9	True	False	2425.0941012390786	2141.8147826420795	2317.798438649438	2055.9391537844594	2593.7776292719022	2291.6094445919075	2435.69601902758	2173.181815327527	2555.598087003255	2532.7458391862287	0.9574960360089907	0.8456493144729613	0.9151326606834529	0.8117431769012531	1.0240970843348747	0.9047925019307116	0.9616819742995488	0.8580339099582809	1.0090227165566557	1.0	11.306486594660397	-7.759503063284703	24.999990019153767	0.9498696409434958	0.882203267287869	0.28023163123547845	0.059313840619470544	75.04517418959254	968904.3430939758	0.016898545088385987	0.020722371858263457	1.7397904264290043e-08	7.759503063284703	-0.06766637365562678	
GSQAWVLSCSPS(ph)SQGQHK	ddPTM_K562_Methotrexat_30min_R1	1	GSQAWVLSCSPSSQGQHK	18	0	Q6PCD5	Q6PCD5	RFWD3	E3 ubiquitin-protein ligase RFWD3	1	GSQAWVLS(0.001)CS(0.388)PS(0.599)S(0.012)QGQHK	119.27	0.00015748	13227000.0	1394.3	1512.2	1983.6	1838.1	1328.6	1390.8	1330.0	1914.6	1767.7	1885.9	True	False	1333.0082414876802	1762.0653469949161	1567.2694674978793	1676.9566268343538	1503.3341876066165	1659.5524163178466	1628.286356022459	1847.2624327943897	1685.5200128332426	1544.3452352553609	0.8631543071179058	1.1409789124667806	1.014843981591155	1.0858690068461703	0.9734443784249037	1.0745993696438192	1.0543538574476958	1.1961460369247947	1.0914140014519087	1.0	10.59277958488176	-8.763518892980288	2.365457559123927	1.1072295875438736	1.02747595803269	0.11847079334613253	0.08279723890510718	0.5542256820896014	6.3418842964765165	0.03730537682371195	0.02458162316594794	1.7237771004467674e-09	8.763518892980288	-0.07975362951118359	
GSQNSRVS(ph)PDFTQESR	ddPTM_K562_Methotrexat_30min_R1	1	GSQNSRVSPDFTQESR	16	1	E7EQS8;Q6N021;D6RE87;E7EPB1;Q6N021-2;Q6N021-3	E7EQS8	TET2	Methylcytosine dioxygenase TET2	1	GS(0.001)QNS(0.007)RVS(0.546)PDFT(0.11)QES(0.337)R	103.39	0.0032645000000000005	7633100.0	1972.5	2070.6	1946.5	2073.3	2242.4	1867.2	1876.2	1944.9	1864.5	2022.4	True	False	1885.7912618048126	2412.731455817797	1537.9562504963799	1891.537008005913	2537.3149046282383	2228.0099739349157	2296.9856099017557	1876.496764620185	1777.819801961633	1656.1237625433173	1.138677739222094	1.4568545602609755	0.9286481392758552	1.1421471334370992	1.532080489402357	1.345316107603788	1.3869649490290894	1.1330655395816795	1.0734824547360073	1.0	10.693594774489496	-9.50546027205808	3.931650857684733	1.04707529019179	1.2768870298703494	0.25593911484549303	0.16629580496411625	0.33256323713508906	11.47835634401934	0.1191611897704939	0.04622321717673788	3.1227680545077225e-10	9.50546027205808	0.2298117396785595	
GSRPPLILQSQSLPCS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	2	GSRPPLILQSQSLPCSSPR	19	1	A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79	A0A590UJS4;Q6KC79	NIPBL	Nipped-B-like protein	1	GSRPPLILQSQSLPCS(0.5)S(0.5)PR;GSRPPLILQSQSLPCS(0.765)S(0.235)PR	138.77	4.4236e-09	136937000.0	3520.3	2810.5	3282.1	3243.1	3176.8	3071.5	2817.5	3969.7000000000003	3758.8	4229.4	True	False	3365.551827088202	3274.88735466817	2593.232062550305	2958.78245823758	3594.604882725199	3665.023904745661	3449.3960963107334	3830.083400952619	3584.0542084276703	3463.41467627606	0.9717438255782058	0.9455660556908538	0.7487500934593847	0.8542963331837955	1.037878861964689	1.0582111145542572	0.9959523818902333	1.1058691375272478	1.0348325405496417	1.0	11.757979417097937	-7.766929051776956	24.872933861868336	1.0429132676409336	0.8753846393076121	0.6069158520047375	0.06247122101862978	86.88341478382937	393655.95444098325	0.020348153996523264	0.023733367723276652	1.7102946934003204e-08	7.766929051776956	-0.1675286283333215	
GSS(ph)GSVDETLFALPAASEPVIR	ddPTM_K562_Methotrexat_30min_R1	1	GSSGSVDETLFALPAASEPVIR	22	0	Q9NQC3-5;Q9NQC3	Q9NQC3-5	RTN4	Reticulon-4	1	GS(0.078)S(0.915)GS(0.007)VDETLFALPAASEPVIR	202.61	5.4497e-27	15140000.0	596.4	408.7	721.69	732.71	615.11	661.02	565.05	813.81	1036.1	1054.1	True	False	570.182970109196	476.23072828780727	570.2171314773865	668.474451905663	696.0077466044758	788.7527597313938	691.7768462184135	785.1878410281007	987.9319371480013	863.1922755621587	0.6605515205031941	0.5517087464408315	0.6605910961216949	0.7744212625979715	0.8063183213162988	0.9137625324759936	0.801416863662143	0.9096326082352195	1.1445097055631148	1.0	9.753538144431483	-7.964801594143581	0.4517255467959287	1.0435146606749455	0.5361281090509706	0.7990303178953884	0.07500156193974045	0.6132050717264207	0.2471634405289733	0.07143615457761998	0.1380685571690405	1.0844222152240134e-08	7.964801594143581	-0.5073865516239748	
GSS(ph)PGIQDTLEAEDGAFETDEAPEDR	ddPTM_K562_Methotrexat_30min_R1	2	GSSPGIQDTLEAEDGAFETDEAPEDR	26	0	Q9UNX4	Q9UNX4	WDR3	WD repeat-containing protein 3	1	GS(0.162)S(0.838)PGIQDTLEAEDGAFETDEAPEDR;GS(0.046)S(0.954)PGIQDTLEAEDGAFETDEAPEDR	198.36	5.4192e-31	27736100.0	2471.4	2394.5	2595.0	2634.7	2044.38	2069.7200000000003	2147.43	2625.8	2613.7	2811.7	True	False	2362.760215170804	2790.150425459147	2050.344962773238	2403.7199416356416	2313.2518037477157	2469.664097714532	2629.0458417393284	2533.4491256823926	2492.1896574884	2302.47388406994	1.0261832855164894	1.2118054605367212	0.8904965120164449	1.0439727278846416	1.004681017123514	1.0726132942489928	1.1418352494370652	1.1003161178984457	1.0823964930638479	1.0	11.168969077227791	-8.511938284204309	23.23600494978998	1.0920291574147325	1.0377492909955512	0.06396122948310412	0.08022245322376005	545.5031927203282	1158581.5126767014	0.029162816960625254	0.024197707340109047	3.0765339772192838e-09	8.511938284204309	-0.054279866419181255	
GSS(ph)PGPRPVEGTPASR	ddPTM_K562_Methotrexat_30min_R1	4	GSSPGPRPVEGTPASR	16	1	Q13112	Q13112	CHAF1B	Chromatin assembly factor 1 subunit B	1	GS(0.006)S(0.994)PGPRPVEGTPASR;GSS(1)PGPRPVEGTPASR;GS(0.006)S(0.994)PGPRPVEGTPASR;GS(0.005)S(0.995)PGPRPVEGTPASR	199.84	3.5766e-15	264487800.0	13726.6	12666.4	16423.100000000002	14953.1	13464.699999999999	13427.7	12920.399999999998	15008.300000000001	14833.300000000001	14600.500000000002	True	False	13123.195099766759	14759.307308012427	12976.115744940715	13642.184939185452	15235.544058307112	16022.412985757217	15818.128597257562	14480.44958221459	14143.703120642269	11956.207968262315	1.0976051215069365	1.234447188204732	1.085303616279153	1.1410126835697867	1.2742789435203683	1.3400915263676092	1.3230054745824673	1.211123929982889	1.1829589413455042	1.0	13.545472276372914	-6.253493053425602	22.949285543626118	1.2109838469430572	1.0976049393183094	0.07435760991919516	0.09988269208831689	796.8195937273947	2301066.908358556	0.025735708067535203	0.2588155995389592	5.578365247089315e-07	6.253493053425602	-0.11337890762474778	
GSS(ph)PTPPCS(ph)PVQPSK	ddPTM_K562_Methotrexat_30min_R1	1	GSSPTPPCSPVQPSK	15	0	H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3	H0YBY0	STAU2	Double-stranded RNA-binding protein Staufen homolog 2	2	GS(0.01)S(0.573)PT(0.418)PPCS(1)PVQPSK	160.03	3.5993e-07	17006000.0	3214.0	2188.2	3993.4	2594.6	2227.1	2290.0	2106.2	3010.0	2998.9	3258.6	True	False	3072.7164083349385	2549.7628569595768	3155.2399130399417	2367.1354463763755	2520.0026864509227	2732.5100901408323	2578.568964702633	2904.1365939157604	2859.4817935654296	2668.435963520397	1.1515046455456945	0.9555270922056313	1.1824304409678685	0.8870872221544626	0.9443744279050826	1.0240118659380921	0.9663222201895357	1.088329131228021	1.0715946841733428	1.0	11.381778674957749	-6.244581693705725	23.468724732917075	1.0141120828534957	1.1515049020614252	0.21127392104131237	0.08009705274402554	2335.6606891082133	3251510.249875086	0.019884876672765145	0.4958946425299393	5.694011058852909e-07	6.244581693705725	0.13739281920792945	
GSS(ph)PTPPCSPVQPSK	ddPTM_K562_Methotrexat_30min_R1	2	GSSPTPPCSPVQPSK	15	0	H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3	H0YBY0	STAU2	Double-stranded RNA-binding protein Staufen homolog 2	1	GSS(0.997)PT(0.003)PPCSPVQPSK;GS(0.023)S(0.976)PT(0.001)PPCSPVQPSK	252.12	1.8429999999999998e-75	130487000.0	8938.7	7098.9	12092.5	8772.3	8243.400000000001	6793.799999999999	6435.2	9428.0	9357.3	9879.1	True	False	8545.765450897172	8271.872564331572	9554.449503790122	8003.246078874382	9327.551589730834	8106.605698864089	7878.45741223739	9096.41189615873	8922.281165403916	8089.899259563732	1.0563500454958723	1.0224938900880274	1.1810344229558885	0.9892887194377717	1.1529873599728664	1.0020650985586264	0.9738634758552303	1.124415966664247	1.1028915044715986	1.0	12.981906022096977	-8.34145936422355	24.999990625782605	1.044249387076642	1.077749432482606	0.07699832699750608	0.06798698494401899	369.569832329596	115456.92884030126	0.0239846279247123	0.021152424646962546	4.555548092202236e-09	8.34145936422355	0.03350004540596396	
GSS(ph)SQGPSQTSTPTDVTAIHL	ddPTM_K562_Methotrexat_30min_R1	1	GSSSQGPSQTSTPTDVTAIHL	21	0	P30281-2;Q5T8J1;P30281-4;P30281-3;P30281	P30281-2	CCND3	G1/S-specific cyclin-D3	1	GS(0.047)S(0.557)S(0.393)QGPS(0.003)QTSTPTDVTAIHL	144.74	4.1681e-16	12625000.0	182.21	162.93	247.58	114.83	49.513999999999996	154.9	195.3	177.15	149.63	242.3	True	False	174.20026657209368	189.8514131635243	195.61634138088561	104.76303218507641	56.025958877882005	184.83223273485356	239.10099648961358	170.91953409042418	142.67373395951688	198.41712206499494	0.8779497694510022	0.9568297896253893	0.9858843800627656	0.5279939104789529	0.282364537368553	0.931533684246809	1.2050421556426563	0.8614152463840119	0.7190595875732017	1.0	7.632392715763739														
GSS(ph)VDAPPRPCHTTPDSQFGTEHVLR	ddPTM_K562_Methotrexat_30min_R1	1	GSSVDAPPRPCHTTPDSQFGTEHVLR	26	1	Q9BSJ8;Q9BSJ8-2	Q9BSJ8	ESYT1	Extended synaptotagmin-1	1	GS(0.29)S(0.572)VDAPPRPCHT(0.06)T(0.06)PDS(0.019)QFGTEHVLR	59.565	0.004181600000000001	27882000.0	1117.0	1225.5	1665.1	1438.7	1370.2	1090.3	1206.6	1452.1	1484.0	1451.7	True	False	1067.898017458035	1427.9930450616769	1315.6182649378486	1312.5714047258502	1550.4053167684688	1300.9850442273128	1477.2107647945104	1401.0288199418856	1415.0091639104658	1188.7830627393862	0.8983119384265214	1.2012225693820573	1.106693311987629	1.10413030422995	1.3041953282845182	1.0943838998087445	1.242624336681314	1.1785403610255083	1.190300575657406	1.0	10.215269750910348	-6.256653740341857	24.390874955541495	1.1655262403324769	0.898311782750684	0.4735226436908151	0.08180558951286514	288.81503005986525	1471926.52891493	0.018985931893584287	0.14942042142317336	5.537914669342204e-07	6.256653740341857	-0.26721445758179285	
GSS(ph)YSSIPK	ddPTM_K562_Methotrexat_30min_R1	1	GSSYSSIPK	9	0	Q14315-2;Q14315	Q14315-2	FLNC	Filamin-C	1	GS(0.037)S(0.962)YSSIPK	92.23899999999999	0.012352	26849000.0	2417.3	1683.7	2803.5	2319.8	1422.0	1713.1	1627.4	1831.5	2212.2	2912.9	True	False	2311.038386393295	1961.9028069933458	2215.083662094325	2116.426735721852	1609.017924715197	2044.1323298778404	1992.3858765345478	1767.085106895918	2109.355304853595	2385.34558342189	0.9688484563641308	0.8224815811296007	0.9286216963651379	0.8872621017394632	0.6745428988981067	0.8569543734394397	0.8352608906573517	0.7408088451321807	0.8842975707644115	1.0	11.219982580398652	-3.000019612292456	0.7688609163316301	0.828831859788483	26.85116365560123	0.11674628429559264	0.08822274202537822	805.28722433446	3.19543770711278	0.03140033241090739	36378.97382509273	0.0009999548420474029	3.000019612292456	26.022331795812747	
GSSANASKWS(ph)PPQNYK	ddPTM_K562_Methotrexat_30min_R1	1	GSSANASKWSPPQNYK	16	1	H3BRF9;Q96K21-2;Q96K21;H3BRM1;Q96K21-3	H3BRF9;Q96K21-3	ZFYVE19	Abscission/NoCut checkpoint regulator	1	GSSANAS(0.001)KWS(0.999)PPQNYK	73.315	0.025028	18877000.0	3892.5	2473.9	5296.6	4315.9	2072.2	2514.1	2323.9	2796.8	3036.6	4270.9	True	False	3721.3903607478983	2882.6699258899075	4184.916042321667	3937.531747867033	2344.730621374704	2999.9142435035214	2845.0937313989393	2698.4349587586685	2895.4291287941514	3497.398624132839	1.0640452406738727	0.8242325899023449	1.196579655931927	1.125845856030587	0.6704213254947646	0.8577558825589502	0.8134885488223021	0.7715548751402997	0.8278807879705327	1.0	11.772066524588078	-7.751709578369952	24.99474074282717	0.8133051708052302	1.0466373200275811	0.4763023251434977	0.11735667670095014	177.50628565046094	455991.01430747984	0.03464659856249844	0.04416374783986289	1.771293062366669e-08	7.751709578369952	0.2333321492223509	
GSSDAVS(ph)PDTFTAEVSSDAVPDVR	ddPTM_K562_Methotrexat_30min_R1	1	GSSDAVSPDTFTAEVSSDAVPDVR	24	0	E9PEI0;Q69YH5	E9PEI0	CDCA2	Cell division cycle-associated protein 2	1	GS(0.162)S(0.162)DAVS(0.596)PDT(0.072)FT(0.009)AEVSSDAVPDVR	62.291000000000004	0.0051126999999999995	7162400.0	1235.1	712.2	1393.7	1097.9	840.16	887.3	953.67	1051.3	1063.7	1282.0	True	False	1180.8064828669822	829.8789446698706	1101.181416037403	1001.6488115997163	950.6557662649219	1058.75816724103	1167.5547737954419	1014.3251831174869	1014.2488191722124	1049.8173771660074	1.124773230611386	0.7904983883102956	1.0489266418984733	0.9541171954151467	0.9055439421580416	1.008516519415175	1.1121503598533182	0.9661920303278537	0.9661192901094734	1.0	10.035922667818497	-8.486749001604045	23.16176020060142	1.0157316998158579	0.9589590124245725	0.057943198934084617	0.09016858573761558	639.1244613915992	409724.800639941	0.030399790867797205	0.026795812945272692	3.2602507117646987e-09	8.486749001604045	-0.05677268739128538	
GSSDAVSPDT(ph)FTAEVSSDAVPDVR	ddPTM_K562_Methotrexat_30min_R1	1	GSSDAVSPDTFTAEVSSDAVPDVR	24	0	E9PEI0;Q69YH5	E9PEI0	CDCA2	Cell division cycle-associated protein 2	1	GS(0.015)S(0.017)DAVS(0.433)PDT(0.497)FT(0.023)AEVS(0.007)S(0.008)DAVPDVR	57.04600000000001	0.026117	5315200.0	671.17	717.78	780.0	881.5	646.04	670.11	538.37	629.61	765.51	794.19	True	False	641.6661704362666	836.3809448260879	616.2886593306841	804.2202636170412	731.0055837433232	799.5992735826518	659.1131770615123	607.4662594336551	729.9216071867259	650.3544951415532	0.9866406325009016	1.286038539095582	0.94761958890827	1.23658753745063	1.1240109651032946	1.2294821971033114	1.0134675503673618	0.9340540643167796	1.1223442178682173	1.0	9.34508250633543	-8.800070990292348	21.591747639871382	1.0119699301833003	1.1375178313300913	0.21909290447398244	0.10850679810565958	55.76744104252642	31167.421376566028	0.04231027055079072	0.028527525688229163	1.5846341451082547e-09	8.800070990292348	0.12554790114679104	
GSSDAVSPDTFTAEVSSDAVPDVRS(ph)PATPACR	ddPTM_K562_Methotrexat_30min_R1	1	GSSDAVSPDTFTAEVSSDAVPDVRSPATPACR	32	1	E9PEI0;Q69YH5	E9PEI0	CDCA2	Cell division cycle-associated protein 2	1	GSSDAVSPDT(0.011)FT(0.011)AEVS(0.239)S(0.252)DAVPDVRS(0.332)PAT(0.154)PACR	44.263999999999996	0.019108	10648000.0	517.91	277.19	483.52	437.27	373.27	407.88	329.53	465.68	515.41	502.2	True	False	495.1432965279239	322.9909360755987	382.0357596917596	398.93521800547194	422.3615476500995	486.6970373653459	403.4354909023163	449.30177045006315	491.44870159777173	411.24671358250293	1.2040054793740982	0.7853945707235453	0.928969757262551	0.9700629934041743	1.027027168121957	1.1834672990467714	0.9810059936719238	1.0925358321676308	1.1950215901219086	1.0	8.683860339583893	-7.911907241283117	3.509694245791749	1.0907894524785655	0.9554366638793871	0.18379023799007088	0.11479707060412081	0.3571612404881502	8.693555990386441	0.03623396629802374	0.041393425296478256	1.224877786653042e-08	7.911907241283117	-0.13535278859917843	
GSSFQS(ph)GRDDTWR	ddPTM_K562_Methotrexat_30min_R1	2	GSSFQSGRDDTWR	13	1	Q96KP1	Q96KP1	EXOC2	Exocyst complex component 2	1	GS(0.002)S(0.093)FQS(0.905)GRDDTWR;GS(0.004)S(0.052)FQS(0.944)GRDDTWR	150.22	1.0663000000000001e-08	298110000.0	6587.9	5418.6	6968.9	6285.1	5123.4	5893.4	5429.799999999999	5798.200000000001	5900.5	6558.9	True	False	6298.303804128727	6313.931549548107	5506.223125653342	5734.095041247266	5797.216902592008	7032.216142024437	6647.570869120862	5594.274019548959	5626.187042893334	5371.019652959534	1.1726458309751746	1.1755554731714695	1.025172775642202	1.0675989684915173	1.0793512735328814	1.3092888494923962	1.2376739052626486	1.0415664773198898	1.0475081839987679	1.0	12.39098028509342	-9.402234629218867	8.282294083010994	1.0306768444440775	1.148333469235747	0.3346912550679838	0.07930938563391667	0.41349101885446843	26.112597358268378	0.049127061225737706	0.023446923007567545	3.9606400138589703e-10	9.402234629218867	0.1176566247916695	
GSSGCSEAGGAGHEEGRAS(ph)PLRR	ddPTM_K562_Methotrexat_30min_R1	2	GSSGCSEAGGAGHEEGRASPLRR	23	2	Q9C0C9	Q9C0C9	UBE2O	E2/E3 hybrid ubiquitin-protein ligase UBE2O	1	GSSGCSEAGGAGHEEGRAS(1)PLRR;GSSGCSEAGGAGHEEGRAS(1)PLRR	75.608	0.0011007	7814200.0	2767.3	2908.8	3081.1	2909.6000000000004	3061.8	2969.2	2864.4	3285.1	3194.7	3564.8	True	False	2645.652805471459	3389.4297588538598	2434.419215722785	2654.519885445425	3464.4803670133515	3542.95587757474	3506.8146151810015	3169.561170987595	3046.179094302402	2919.1801763817343	0.9062999354670506	1.1610896053202822	0.8339393489374126	0.9093374595108582	1.1867990866214726	1.213681809105104	1.2013011884479252	1.0857709971558531	1.0435049946379398	1.0	11.511347543652425	-7.760971137723701	24.999998879401534	1.1346964186920738	0.959073416642301	0.3937752186458636	0.10196572617604205	13.181015695657615	703720.8412943484	0.031669809942161654	0.03842410588697102	1.733919226464101e-08	7.760971137723701	-0.17562300204977288	
GSSHS(ph)PDHPGCLMEN	ddPTM_K562_Methotrexat_30min_R1	1	GSSHSPDHPGCLMEN	15	0	O95149	O95149	SNUPN	Snurportin-1	1	GSS(0.014)HS(0.986)PDHPGCLMEN	73.415	0.032952999999999996	19485000.0	2888.4	3187.2	3293.3	3272.6	3431.6	2775.1	3141.7	3390.4	3354.1	3646.7	True	False	2761.429394472506	3713.8306268629754	2602.081335607361	2985.6962390392832	3882.9155488415363	3311.3487996287413	3846.306199034404	3271.157710302988	3198.1686230944047	2986.247292754507	0.9247155790387911	1.2436447027926303	0.8713549416757136	0.9998154694969299	1.3002659084070511	1.1088662374556266	1.288006592209107	1.0954075096994664	1.070965767253797	1.0	11.544117925438657	-7.701047007123675	24.999922945366276	1.1541427273488927	1.0166846056688768	0.21245042223692878	0.12522951834289897	111.67717907846298	46228.65284531744	0.035913919793574715	0.04636465626311717	1.9904578843413224e-08	7.701047007123675	-0.13745812168001592	
GSSLSSESS(ph)PVSSPATNHSSPASTPK	ddPTM_K562_Methotrexat_30min_R1	2	GSSLSSESSPVSSPATNHSSPASTPK	26	0	Q14687-3;Q14687	Q14687-3	GSE1	Genetic suppressor element 1	1	GS(0.037)S(0.061)LS(0.051)S(0.042)ES(0.167)S(0.563)PVS(0.077)S(0.001)PAT(0.001)NHSSPASTPK;GS(0.003)S(0.01)LS(0.031)S(0.026)ES(0.098)S(0.82)PVS(0.01)S(0.001)PATNHSSPASTPK	105.25	6.1158e-08	33681000.0	9658.0	8656.8	11959.0	10970.5	7525.599999999999	6777.900000000001	6649.7	8423.9	8080.9	11475.3	True	False	9233.445884162666	10087.18905955931	9448.969329404683	10008.733297800052	8515.348308183322	8087.633248893245	8141.06449747559	8127.626662288025	7705.2207228059915	9397.01197206949	0.9825938193552389	1.0734464412242124	1.005529136015749	1.0650974296455902	0.9061761689240457	0.8606600984368138	0.8663460812514742	0.8649160697512754	0.8199649788366804	1.0	13.197986371412666	-7.861617199987535	4.873211071940059	0.8741532304969185	1.0324518015191266	0.6663194327960535	0.05031711266434706	0.1125290498025294	4.4252845474180145	0.014787218148553723	0.016999582728966175	1.3752536302000229e-08	7.861617199987535	0.15829857102220812	
GSSLSSESSPVSSPATNHS(ph)SPASTPK	ddPTM_K562_Methotrexat_30min_R1	1	GSSLSSESSPVSSPATNHSSPASTPK	26	0	Q14687-3;Q14687	Q14687-3	GSE1	Genetic suppressor element 1	1	GSSLSSESSPVSSPAT(0.003)NHS(0.462)S(0.462)PAS(0.028)T(0.044)PK	111.56	1.7009e-08	26970000.0	1400.8	1413.3	2115.4	1954.3	1309.1	1260.3	1616.0	1739.0	2022.2	1878.1	True	False	1339.2225092705607	1646.8238030074813	1671.4064486514471	1782.9695532464934	1481.269595812	1503.8351382552344	1978.4291363400707	1677.8383843254164	1928.1883633825782	1537.9578908389071	0.8707796990072709	1.0707860161952751	1.086769968545594	1.1593097339446272	0.9631405415163965	0.9778129474240287	1.286400068639656	1.0909520958406793	1.25373287192591	1.0	10.586800287630519	-8.74198008630525	24.985613484743	1.165350662183625	1.0302637668797923	0.28620605647670694	0.10465183709228697	313.058288571901	401965.04759365023	0.03925030676065911	0.030357998669580964	1.8114231498588178e-09	8.74198008630525	-0.13508689530383267	
GSSLSSESSPVSSPATNHSS(ph)PASTPK	ddPTM_K562_Methotrexat_30min_R1	1	GSSLSSESSPVSSPATNHSSPASTPK	26	0	Q14687-3;Q14687	Q14687-3	GSE1	Genetic suppressor element 1	1	GSSLSSESSPVSSPATNHS(0.172)S(0.484)PAS(0.172)T(0.172)PK	142.95	6.9853e-18	30154000.0	4460.3	3497.7	5383.0	4425.4	3908.2	3970.5	3288.9	4830.4	5003.8	5247.3	True	False	4264.230552612421	4075.635474265383	4253.181863047529	4037.4320528767475	4422.196802652551	4737.7429313992025	4026.5195461069643	4660.512094103219	4771.174430171961	4296.963122623392	0.992382394477943	0.9484920763706988	0.989811115821461	0.9396012806392913	1.029144695091705	1.1025793790165703	0.9370616947833343	1.0846060254894327	1.1103596409873426	1.0	12.069101680336505	-7.891989448871027	5.851603008287235	1.0474236600886004	0.9682267882007367	0.3614972174380374	0.05011657684990427	0.2357818333668982	11.343806178024789	0.015600043901654436	0.017779243385841956	1.282361737092202e-08	7.891989448871027	-0.07919687188786373	
GSSPSHS(ph)ATSVHTSV	ddPTM_K562_Methotrexat_30min_R1	1	GSSPSHSATSVHTSV	15	0	F8WA39;Q13613	F8WA39	MTMR1	Myotubularin-related protein 1	1	GS(0.004)S(0.003)PS(0.361)HS(0.541)AT(0.08)S(0.01)VHTSV	77.64399999999999	0.033879	15733000.0	2397.5	2242.5	2550.3	2596.7	2252.5	2351.8	2157.9	2399.8	2206.8	2771.6	True	False	2292.108770685442	2613.0350090173915	2015.0268819115945	2369.051342636836	2548.743231660324	2806.2520654992177	2641.8640057600483	2315.397673780413	2104.206349674945	2269.6363826468837	1.0099013164445092	1.1513011639203772	0.8878192548013529	1.0438021529572121	1.1229742575275172	1.2364324466047398	1.1640031971460851	1.0201623887788411	0.9271116579568522	1.0	11.14824546721266	-9.511371591991942	8.848126267389661	0.9666160453543823	1.0884455850932222	0.23347330701195923	0.09156497123213027	0.264712885350963	174.4290128925895	0.05983727008410318	0.025840964728651914	3.080551034512605e-10	9.511371591991942	0.12182953973883992	
GSSS(ph)QGPSQTSTPTDVTAIHL	ddPTM_K562_Methotrexat_30min_R1	2	GSSSQGPSQTSTPTDVTAIHL	21	0	P30281-2;Q5T8J1;P30281-4;P30281-3;P30281	P30281-2	CCND3	G1/S-specific cyclin-D3	1	GS(0.288)S(0.225)S(0.478)QGPS(0.007)QT(0.001)S(0.001)TPTDVTAIHL;GS(0.054)S(0.054)S(0.711)QGPS(0.013)QT(0.058)S(0.058)T(0.05)PT(0.003)DVTAIHL	114.58	2.3482e-05	14051000.0	629.4100000000001	764.3299999999999	888.1300000000001	748.62	689.29	598.5799999999999	659.26	916.77	752.8	724.71	True	False	601.741890034254	890.6225411113761	701.7236500145652	682.989646907532	779.9437168262574	714.247113430785	807.1158368957634	884.5266794698176	717.8024923125332	593.457996416519	1.0139586856487834	1.500733912912502	1.1824318726039373	1.1508643426015532	1.3142357530537903	1.2035343996434924	1.3600218410896405	1.4904621469604595	1.2095253525048855	1.0	9.213002112639307	-7.819012689421747	24.996860291453146	1.289367863125853	1.230506451924781	0.0024944006787771533	0.1649530879253759	374.9262588006454	162780.3424429773	0.049789673997532334	0.05645621998592295	1.5170060422111602e-08	7.819012689421747	-0.05886141120107191	
GSSS(ph)SSPEHSASSDSTKAPQTPR	ddPTM_K562_Methotrexat_30min_R1	1	GSSSSSPEHSASSDSTKAPQTPR	23	1	A0A075B784;Q9P275	A0A075B784	USP36	Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36	1	GS(0.131)S(0.109)S(0.405)S(0.335)S(0.021)PEHSASSDSTKAPQTPR	90.712	0.00015521	2574400.0	252.79	105.23	264.02	338.12	223.14	0.0	180.23	145.97	167.06	71.22399999999999	True	False	241.67765428219934	122.61746889583053	208.60581004677857	308.47754456516617	252.48682118210186	0.0	220.65116537287793	140.83615236341637	159.293417063937	58.32464342532893	4.143662782809998	2.1023269358313956	3.5766324112010994	5.288974375987391	4.3289903950352	0.0	3.783154982428142	2.41469375708613	2.7311511517061393	1.0	5.86603367703542														
GSSSQGPS(ph)QTSTPT(ph)DVTAIHL	ddPTM_K562_Methotrexat_30min_R1	1	GSSSQGPSQTSTPTDVTAIHL	21	0	P30281-2;Q5T8J1;P30281-4;P30281-3;P30281	P30281-2	CCND3	G1/S-specific cyclin-D3	2	GSSS(0.001)QGPS(0.899)QT(0.087)S(0.061)T(0.116)PT(0.833)DVT(0.002)AIHL	98.804	0.0014880999999999998	7711400.0	323.9	256.06	388.56	359.26	376.33	260.79	231.63	321.56	394.44	325.11	True	False	309.66174382690923	298.3695627241886	307.0065659865778	327.7642335871337	425.8239912855626	311.1839765973044	283.57892379359527	310.2505525380568	376.10257049383046	266.2294286196884	1.1631386711544363	1.1207234462062896	1.1531654016549011	1.2311344966125004	1.5994625143182677	1.1688564191069728	1.0651674582477912	1.1653503301517167	1.4127009641413346	1.0	8.056526243282443	-12.219219222329173	17.830244319018618	0.9999993621090078	1.2277340910454453	0.17417645024700368	0.15079021432530545	0.0	0.0	0.15412519725981497	0.037380851051257345	6.036438462849339e-13	12.219219222329173	0.22773472893643754	
GSSSQGPSQTST(ph)PTDVTAIHL	ddPTM_K562_Methotrexat_30min_R1	2	GSSSQGPSQTSTPTDVTAIHL	21	0	P30281-2;Q5T8J1;P30281-4;P30281-3;P30281	P30281-2	CCND3	G1/S-specific cyclin-D3	1	GSSSQGPSQT(0.006)S(0.108)T(0.871)PT(0.014)DVTAIHL;GSSSQGPSQT(0.005)S(0.1)T(0.796)PT(0.1)DVTAIHL	189.44	1.0853e-18	52600000.0	2294.94	1904.37	2755.43	2338.67	1940.73	1658.31	2099.96	2667.5	2341.9700000000003	2398.02	True	False	2194.0571854835666	2219.0347737446814	2177.102898178907	2133.6424321194154	2195.9700119778645	1978.75493780849	2570.9294858593385	2573.6825130466063	2233.0923258782996	1963.7153407110984	1.1172989995021667	1.1300185560200018	1.1086652189571105	1.0865334643394817	1.118273084928217	1.007658746044091	1.3092169891224439	1.3106189373224673	1.1371772066870214	1.0	10.939370097049547	-8.76023708512437	24.999999918871588	1.2151381843963656	1.0976743043552302	0.18849622995079374	0.08974023814826207	41.72531177836001	867651.4859997147	0.034406576327901395	0.025151949376508605	1.736852407104118e-09	8.76023708512437	-0.1174638800411354	
GSSSQGPSQTSTPT(ph)DVTAIHL	ddPTM_K562_Methotrexat_30min_R1	2	GSSSQGPSQTSTPTDVTAIHL	21	0	P30281-2;Q5T8J1;P30281-4;P30281-3;P30281	P30281-2	CCND3	G1/S-specific cyclin-D3	1	GSSSQGPSQT(0.001)S(0.018)T(0.057)PT(0.917)DVT(0.007)AIHL;GSSSQGPSQTST(0.007)PT(0.991)DVT(0.002)AIHL	123.1	4.742e-06	52833000.0	1557.4699999999998	1957.4499999999998	2047.5	1973.31	1602.2800000000002	1582.5900000000001	1471.92	1768.46	1687.99	2011.3400000000001	True	False	1489.0054836619217	2280.885341538947	1617.7577307430452	1800.3129760614224	1813.0079046502572	1888.4031194567578	1802.0355286891556	1706.2622594273298	1609.5157133350594	1647.0668357169084	0.904034645937007	1.3848165065785936	0.9822052728290738	1.0930418468888736	1.1007494446095873	1.1465248880655194	1.0940876773253678	1.035939903850141	0.9772012151738187	1.0	10.685683383503491	-9.398715828506624	2.532997034600318	0.9900067250254817	1.109474021727616	0.13057009914125706	0.11680055879778521	0.5679974389168323	6.846799210394286	0.08000961380758338	0.030465311802023158	3.9928608138442814e-10	9.398715828506624	0.1194672967021343	
GSSSS(ph)SPEHSASSDSTKAPQTPR	ddPTM_K562_Methotrexat_30min_R1	3	GSSSSSPEHSASSDSTKAPQTPR	23	1	A0A075B784;Q9P275	A0A075B784	USP36	Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36	1	GS(0.003)S(0.048)S(0.189)S(0.594)S(0.166)PEHS(0.001)ASSDSTKAPQTPR;GSS(0.018)S(0.097)S(0.531)S(0.354)PEHSASSDSTKAPQTPR;GS(0.06)S(0.06)S(0.176)S(0.529)S(0.176)PEHSASSDSTKAPQTPR	199.36	5.1421e-24	66845000.0	4960.799999999999	3729.34	6606.9	5492.9	3668.83	3413.5299999999997	3414.32	4632.040000000001	4105.56	5948.700000000001	True	False	4742.7291718942015	4345.550047058599	5220.2019786306355	5011.345985277422	4151.345451992162	4073.1463615713674	4180.06817375534	4469.128527734734	3914.6934117144588	4871.332785918429	0.9735999120413242	0.8920659371949067	1.0716167849835025	1.0287422776295903	0.8521991073967404	0.836146192546241	0.8580953832262642	0.9174344525698701	0.8036185544602229	1.0	12.250100829161424	-7.767345977144553	24.999574722889097	0.8707078423138274	0.990125536916018	0.4154724008514099	0.06566417375486458	135.65434933832393	574153.9305515215	0.020060550949358873	0.023351474671337892	1.7086535878614723e-08	7.767345977144553	0.11941769460219065	
GSSSSS(ph)PEHSASSDSTKAPQTPR	ddPTM_K562_Methotrexat_30min_R1	1	GSSSSSPEHSASSDSTKAPQTPR	23	1	A0A075B784;Q9P275	A0A075B784	USP36	Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36	1	GS(0.016)S(0.02)S(0.062)S(0.2)S(0.697)PEHS(0.005)ASSDSTKAPQTPR	95.68	2.7483e-05	1890400.0	238.99	70.205	373.22	284.15	140.61	231.43	158.57	206.74	256.69	388.28	True	False	228.48428575854598	81.80518296903718	294.8862223530742	259.2390106713355	159.10267960211232	276.150572122835	194.13335900336938	199.4688370186525	244.7565379273434	317.95872948987306	0.7185973038863308	0.25728239353668275	0.927435528586317	0.8153228284917783	0.5003878329032627	0.8685107421516174	0.6105615005910775	0.6273419111300278	0.7697745500493921	1.0	8.312695708038213	-15.999999999660256	0.18542798827736104	2.3624486229546267	0.6107325231279898	0.22910270272410516	0.18351245696464294	209.61325922613577	2.0360104454104726	105.40248210427434	0.5316289182903838	1.00000000078229e-16	15.999999999660256	-1.7517160998266368	
GSSVDAPPRPCHT(ph)TPDSQFGTEHVLR	ddPTM_K562_Methotrexat_30min_R1	2	GSSVDAPPRPCHTTPDSQFGTEHVLR	26	1	Q9BSJ8;Q9BSJ8-2	Q9BSJ8	ESYT1	Extended synaptotagmin-1	1	GS(0.239)S(0.239)VDAPPRPCHT(0.417)T(0.105)PDS(0.001)QFGTEHVLR;GS(0.017)S(0.017)VDAPPRPCHT(0.701)T(0.265)PDS(0.001)QFGTEHVLR	78.531	0.00054449	42965000.0	2370.84	1919.03	2683.3	2896.7	2273.2	2087.4700000000003	2150.48	2472.2	2413.0	2817.6	True	False	2266.6207123636595	2236.1170895672867	2120.111999464134	2642.750808416884	2572.1656444884557	2490.8440340027423	2632.77988187908	2385.251324743702	2300.82015668191	2307.305336897771	0.9823670392108514	0.9691465857630274	0.9188692825175349	1.145384083395797	1.1147920491298284	1.0795467743995009	1.1410626239086836	1.0337822595906319	0.9971892839182781	1.0	11.171993220143602	-7.2536116396018935	24.991017707021005	1.0793522892890164	0.9580295276891561	0.512153564097444	0.051766771300237255	479.72368759559475	1531572.685552655	0.014604194548763444	0.024690545933263027	5.576842255835214e-08	7.2536116396018935	-0.12132276159986033	
GSTSSS(ph)PYVAAS(ph)HTPPINGSDSILGTR	ddPTM_K562_Methotrexat_30min_R1	1	GSTSSSPYVAASHTPPINGSDSILGTR	27	0	Q99081;Q99081-3;B4DGI9;F5GY10;Q99081-4;Q99081-2	Q99081	TCF12	Transcription factor 12	2	GS(0.023)T(0.028)S(0.112)S(0.376)S(0.461)PYVAAS(0.591)HT(0.409)PPINGSDSILGTR	107.17	8.105800000000001e-11	25122000.0	439.4	342.38	478.55	320.45	380.98	395.07	476.32	445.43	537.61	391.05	True	False	420.08450212270435	398.9524755350609	378.10889477269103	292.35664603072127	431.08554779043305	471.41168616241856	583.146885038058	429.76397442787254	512.6166284433332	320.2270556480244	1.3118332592872404	1.245842499871613	1.1807524945309027	0.9129667243109628	1.3461871512326493	1.4721169802734213	1.8210418974685896	1.3420601627747686	1.6007911243039143	1.0	8.322951394569106	-7.9950380670666386	24.7474588167513	1.4827465100105695	1.1649958240012364	0.268769140793501	0.21752987965772722	144.34907058850126	719925.7825587388	0.06593551040256089	0.07449862614616247	1.0114907905156166e-08	7.9950380670666386	-0.3177506860093331	
GSTSSS(ph)PYVAASHT(ph)PPINGSDSILGTR	ddPTM_K562_Methotrexat_30min_R1	1	GSTSSSPYVAASHTPPINGSDSILGTR	27	0	Q99081;Q99081-3;B4DGI9;F5GY10;Q99081-4;Q99081-2	Q99081	TCF12	Transcription factor 12	2	GS(0.026)T(0.029)S(0.102)S(0.34)S(0.495)PY(0.007)VAAS(0.054)HT(0.943)PPINGS(0.002)DS(0.001)ILGTR	58.919	0.004735499999999999	24418000.0	964.54	820.09	1077.8	843.52	883.56	783.9	997.07	829.53	820.02	1221.2	True	False	922.1399765075857	955.5959333534316	851.5845090084765	769.5699112492875	999.7636269770453	935.377580638165	1220.6883285709114	800.35495971792	781.897449184542	1000.0288463300529	0.9221133769207689	0.9555683687128795	0.8515599446292539	0.7695477126219777	0.9997347882973767	0.9353505992060651	1.2206531172082122	0.8003318730805572	0.7818748949632618	1.0	9.965825900519173	-6.642172906290635	14.98846109663601	0.920347050355721	0.938756379749877	0.0034093454220245345	0.12832606348883266	10.255668433756826	1279.7528559677062	0.034272858568973885	0.09068563333356788	2.2794343768139403e-07	6.642172906290635	0.01840932939415607	
GSTSSSPYVAAS(ph)HTPPINGSDSILGTR	ddPTM_K562_Methotrexat_30min_R1	2	GSTSSSPYVAASHTPPINGSDSILGTR	27	0	Q99081;Q99081-3;B4DGI9;F5GY10;Q99081-4;Q99081-2	Q99081	TCF12	Transcription factor 12	1	GSTSSSPYVAAS(0.601)HT(0.398)PPINGSDSILGTR;GSTSSSPYVAAS(0.582)HT(0.418)PPINGSDSILGTR	89.652	3.8403000000000005e-05	240169000.0	1949.8	1830.85	1818.15	1807.1200000000001	1781.08	2084.34	1954.81	2263.18	1741.69	2418.9	True	False	1864.0891266245999	2133.366843371009	1436.5451614898498	1648.6925953348007	2015.3232386439813	2487.1092058009344	2393.2259034708736	2183.5826766173636	1660.7192120560787	1980.8137703797627	0.941072378685663	1.0770153536250906	0.7252297934168918	0.8323309439729473	1.017421864074381	1.2555997151231963	1.208203385526769	1.1023664663835238	0.8384024974431012	1.0	10.951877533804659	-7.967649521926093	6.493653593559651	1.0998017044847022	0.8972698159844223	0.2944896046564538	0.1350698177700276	0.2274174052500246	29.298061910956807	0.04496609642653386	0.05050340359204109	1.0773342776955648e-08	7.967649521926093	-0.2025318885002798	
GSTSSSPYVAASHT(ph)PPINGSDSILGTR	ddPTM_K562_Methotrexat_30min_R1	2	GSTSSSPYVAASHTPPINGSDSILGTR	27	0	Q99081;Q99081-3;B4DGI9;F5GY10;Q99081-4;Q99081-2	Q99081	TCF12	Transcription factor 12	1	GSTSSSPYVAAS(0.001)HT(0.999)PPINGSDSILGTR;GSTSSSPYVAAS(0.288)HT(0.711)PPINGSDSILGTR	111.23	2.1016e-11	666490000.0	2874.1000000000004	2938.7	3344.9	3471.6000000000004	2812.2	2819.9	3108.0	3350.7	3441.2	3321.9	True	False	2747.758005350171	3424.27022564076	2642.8512007630834	3167.2502180067145	3182.053592042245	3364.8057655843336	3805.0481161787993	3232.8539818051613	3281.219363105592	2720.271720130856	1.010104242534269	1.2587971268826186	0.9715394168917624	1.1643139156166198	1.1697557889140484	1.2369373767641392	1.3987750150178972	1.1884305372441426	1.2062101512961183	1.0	11.409535050000313	-7.775917331238316	2.313077202483132	1.2269330099581701	1.0968545074153242	0.14986348586740716	0.11638576799620558	0.48723721684147775	5.348366719093011	0.0377186312853593	0.047678012566528365	1.6752617348621766e-08	7.775917331238316	-0.13007850254284592	
GSVGAVPSGT(ph)SPGGVATTAAAGSR	ddPTM_K562_Methotrexat_30min_R1	1	GSVGAVPSGTSPGGVATTAAAGSR	24	0	Q6ZNB6-2;Q6ZNB6	Q6ZNB6-2	NFXL1	NF-X1-type zinc finger protein NFXL1	1	GSVGAVPS(0.001)GT(0.499)S(0.499)PGGVAT(0.001)TAAAGSR	138.04	5.7017e-16	21762000.0	4152.7	3610.2	4753.7	3780.2	4382.3	3739.7	4018.1	3996.8	4003.3	4364.2	True	False	3970.152280302583	4206.724187092345	3755.963333154197	3448.795735139124	4958.6492626437475	4462.344097860113	4919.261208371309	3856.230278592196	3817.1874567943187	3573.801090037353	1.110904658731605	1.177100818179105	1.0509715673949107	0.9650217368709454	1.3875000700142268	1.2486268780598175	1.3764787363473254	1.0790276742995484	1.0681029415530292	1.0	11.803243624021203	-6.248044552507721	20.73934722931767	1.1614411773144162	1.1109043385375714	0.0014335373614523528	0.14054954480740398	1578.0246338582106	2442770.616774806	0.03671243128591362	0.5514419908177371	5.64879023194187e-07	6.248044552507721	-0.050536838776844784	
GSVGAVPSGTS(ph)PGGVATTAAAGSR	ddPTM_K562_Methotrexat_30min_R1	1	GSVGAVPSGTSPGGVATTAAAGSR	24	0	Q6ZNB6-2;Q6ZNB6	Q6ZNB6-2	NFXL1	NF-X1-type zinc finger protein NFXL1	1	GSVGAVPSGT(0.238)S(0.762)PGGVATTAAAGSR	184.91	2.7217e-26	19481000.0	3820.9	3183.7	4102.9	3418.1	3508.3	3947.2	3374.7	4050.6	3772.2	4274.4	True	False	3652.93781101648	3709.752311352805	3241.7573594459805	3118.440479942609	3969.702943233699	4709.940536158902	4131.562380202249	3908.138102098063	3596.8312453524663	3500.264740217145	1.0436175781349222	1.0598490647660737	0.9261463346469251	0.8909156053576538	1.1341150563906865	1.3455955151171546	1.1803571120583125	1.116526432185131	1.0275883432546677	1.0	11.773248328135168	-7.86282452352724	7.5379288207403095	1.1543073979417613	0.9824695503705984	0.3534299262869002	0.09998273779153619	0.25122510616581334	16.505746814070225	0.03298155871037043	0.03750227590230489	1.3714357821886323e-08	7.86282452352724	-0.17183784757116294	
GSVILDSGHLSTASS(ph)SDDLKGEEGSFR	ddPTM_K562_Methotrexat_30min_R1	1	GSVILDSGHLSTASSSDDLKGEEGSFR	27	1	A0A0D9SFK2;Q92614-3;Q92614-4;Q92614	A0A0D9SFK2	MYO18A	Unconventional myosin-XVIIIa	1	GSVILDSGHLS(0.007)T(0.025)AS(0.444)S(0.489)S(0.035)DDLKGEEGSFR	114.33	2.4729e-12	26403000.0	740.55	523.55	813.04	629.38	471.45	512.83	523.92	848.93	701.08	1048.3	True	False	707.9963087095329	610.0577386715962	642.3940148489992	574.2032325754889	533.4539385421793	611.9271395314072	641.422396727283	819.0726507218951	668.4869438236859	858.4427117653078	0.8247449701723301	0.7106563202302331	0.7483248515535481	0.6688894025259917	0.6214205458686706	0.7128339854770691	0.7471930135072815	0.9541378119892803	0.7787205071017547	1.0	9.745578048859631	-9.13951846777588	4.685913856395766	0.8988941950475755	0.711006401703651	0.5970784648420149	0.0722375730575646	0.1625348835262047	5.47654129491937	0.03514714639154783	0.019747488930960726	7.25239637616823e-10	9.13951846777588	-0.18788779334392447	
GSVIS(ph)PTELEAPILVPHTAQR	ddPTM_K562_Methotrexat_30min_R1	2	GSVISPTELEAPILVPHTAQR	21	0	Q8N1B4-2;Q8N1B4	Q8N1B4-2	VPS52	Vacuolar protein sorting-associated protein 52 homolog	1	GS(0.016)VIS(0.964)PT(0.02)ELEAPILVPHTAQR;GS(0.268)VIS(0.643)PT(0.089)ELEAPILVPHTAQR	120.33	2.1978e-06	34670000.0	3302.8999999999996	3267.2	3600.4	3928.5	3361.6	3493.2	3960.7	3919.3	4322.5	4173.9	True	False	3157.708470780791	3807.0492670954786	2844.7252423771724	3584.0945043897304	3803.709321886502	4168.211461519628	4848.987797216656	3781.455997519611	4121.547918465625	3417.9662640820547	0.9238559502367821	1.1138346528174168	0.8322859333841802	1.0486044119432794	1.1128574795655697	1.219500468837735	1.4186763187725386	1.1063467879298032	1.2058480394546924	1.0	11.738922442096937	-7.834042532120173	2.33916887667831	1.2082179429910993	0.9709711318606326	0.40940524317556615	0.1197338677670578	0.27659039530271046	3.0966468786454744	0.03989479228391792	0.04849210816635746	1.4654043212766614e-08	7.834042532120173	-0.23724681113046675	
GSVPLSSSPPAT(ph)HFPDETEITNPVPK	ddPTM_K562_Methotrexat_30min_R1	4	GSVPLSSSPPATHFPDETEITNPVPK	26	0	P11388;P11388-2;P11388-3;P11388-4	P11388	TOP2A	DNA topoisomerase 2-alpha	1	GSVPLS(0.003)S(0.038)S(0.123)PPAT(0.834)HFPDET(0.002)EITNPVPK;GSVPLS(0.001)S(0.002)S(0.009)PPAT(0.988)HFPDETEITNPVPK;GS(0.001)VPLS(0.042)S(0.153)S(0.135)PPAT(0.666)HFPDET(0.003)EITNPVPK;GS(0.004)VPLS(0.04)S(0.144)S(0.239)PPAT(0.571)HFPDET(0.002)EITNPVPK	109.56	9.3653e-08	734958000.0	20726.399999999998	17382.800000000003	28093.399999999998	19039.199999999997	17165.4	16777.1	14166.300000000001	18577.5	19531.6	21478.300000000003	True	False	19815.292273090618	20255.01224291973	22196.979259026477	17370.062896264968	19422.95097391437	20019.03713244617	17343.453387459365	17924.11879517276	18623.5801791332	17588.371741017672	1.1266132286071464	1.1516138356163583	1.2620258194373455	0.9875878877267764	1.1043063712724637	1.1381972946227856	0.9860749842472833	1.0190891493026666	1.0588575482346287	1.0	14.102334309778888	-7.906474318286827	0.6234170645976659	1.015260613697562	1.1755339453621105	0.3943290435597525	0.06613437637576004	0.9423724291692285	0.7957179113840216	0.048843708822784354	0.07891540549538982	1.2402969670803948e-08	7.906474318286827	0.1602733316645486	
GSVPSPSPRPQALDATQVPS(ph)PLPLAQPS(ph)TPPVR	ddPTM_K562_Methotrexat_30min_R1	1	GSVPSPSPRPQALDATQVPSPLPLAQPSTPPVR	33	1	O95402;B8ZZF3	O95402	MED26	Mediator of RNA polymerase II transcription subunit 26	2	GSVPS(0.001)PS(0.002)PRPQALDAT(0.109)QVPS(0.887)PLPLAQPS(0.507)T(0.493)PPVR	55.532	0.0057125	13127000.0	708.15	720.73	1003.1	861.2	503.9	606.73	788.37	938.3	897.7	923.31	True	False	677.0205739148684	839.8183821846618	792.5630181725757	785.699933099258	570.1716823234789	723.9719855856532	965.1820409755074	905.2994571664974	855.96612293964	756.0896119431711	0.8954237212370989	1.1107392151921058	1.048239528295683	1.0391624493821408	0.7541059595543469	0.9575214024234843	1.2765445070657206	1.197344128085364	1.132096129108008	1.0	9.562413422957057	-8.743108420575332	24.923397838559143	1.167941534028771	0.9712646767786842	0.38996660091709145	0.11190863388941859	238.58129276136725	324383.38993133476	0.04462998355186125	0.034504599569993265	1.8067230256370276e-09	8.743108420575332	-0.19667685725008688	
GSYGS(ph)DAEEEEYR	ddPTM_K562_Methotrexat_30min_R1	2	GSYGSDAEEEEYR	13	0	Q9UDY2-7;A0A3B3ITE1;A0A1B0GTW1;A0A2R8YDH4;Q9UDY2-3;Q9UDY2;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3IS03	Q9UDY2-7	TJP2	Tight junction protein ZO-2	1	GS(0.001)YGS(0.999)DAEEEEYR;GSYGS(1)DAEEEEYR	141.46	7.2701e-06	54777000.0	1905.04	1679.04	1863.4	1570.73	1425.01	1508.85	1654.81	1571.98	1573.3600000000001	1715.15	True	False	1821.2967226304884	1956.4728211998029	1472.297804867688	1433.0265396156499	1612.4237924742624	1800.413908082529	2025.9432667740793	1516.692572393255	1500.2148370149414	1404.5197148566901	1.2967398772443177	1.3929835234811432	1.048257129675046	1.02029649314098	1.148025033339447	1.281871581465294	1.4424455885838499	1.079865634031353	1.0681336980506646	1.0	10.455861159981762	-9.496457583108578	24.624801244336112	1.0473776564657047	1.2252001055202764	0.30132931790820017	0.12868652796984031	853.7221035299197	795682.7742232673	0.07863610894656363	0.037561975168140214	3.1881769449561107e-10	9.496457583108578	0.17782244905457167	
GSYGS(ph)DAEEEEYRQQLSEHSK	ddPTM_K562_Methotrexat_30min_R1	3	GSYGSDAEEEEYRQQLSEHSK	21	1	Q9UDY2-7;A0A3B3ITE1;A0A1B0GTW1;A0A2R8YDH4;Q9UDY2-3;Q9UDY2;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3IS03	Q9UDY2-7	TJP2	Tight junction protein ZO-2	1	GS(0.005)YGS(0.995)DAEEEEYRQQLSEHSK;GS(0.012)Y(0.005)GS(0.982)DAEEEEYRQQLSEHSK;GS(0.018)Y(0.03)GS(0.951)DAEEEEY(0.001)RQQLSEHSK	92.428	0.00040417	291317000.0	5646.3	4243.15	8183.400000000001	6134.8	4721.5	3734.34	3996.77	4981.8	5528.77	6707.5	True	False	5398.095412688723	4944.258416281888	6465.816172777847	5596.971608891461	5342.4600081173	4455.948353719002	4893.147412902165	4806.587270288877	5271.738689456385	5492.706752996093	0.9827750971311616	0.9001497146347663	1.1771639127195266	1.0189824180652818	0.9726461375720016	0.8112481794678783	0.8908444657514462	0.875085360722569	0.959770642512605	1.0	12.423301555347638	-8.024554074875594	6.338164815152981	0.8975250892115658	1.0197143943849183	0.30641889206732165	0.07927379963400827	0.21012775004687492	30.938868390066563	0.026298077330057956	0.02738006803665499	9.450307174479027e-09	8.024554074875594	0.12218930517335247	
GT(ph)PPLTPSDSPQTR	ddPTM_K562_Methotrexat_30min_R1	1	GTPPLTPSDSPQTR	14	0	Q6NZY4-2;Q6NZY4	Q6NZY4-2	ZCCHC8	Zinc finger CCHC domain-containing protein 8	1	GT(0.985)PPLT(0.014)PS(0.001)DSPQTR	147.7	3.2426e-08	13635000.0	341.07	412.56	456.86	492.66	355.13	467.03	424.23	450.44	362.73	406.74	True	False	326.07697118568683	480.7285276790254	360.971329361303	449.4692627039948	401.83581969346545	557.2769377285906	519.3743765529381	434.5977698881774	345.86676147253627	333.0754446088158	0.9789883237074158	1.4433022171406913	1.0837524506955167	1.349451813332799	1.2064408415498957	1.6731252535985977	1.559329530169728	1.304802791447432	1.0384036622055504	1.0	8.379705187596915	-9.762172497083114	4.621513927532074	1.0061785734035964	1.3388235340927725	0.280544366805774	0.19588671315732034	0.24470091212305373	12.694316823331436	0.17421125986871458	0.051559880142971436	1.7291294312474183e-10	9.762172497083114	0.33264496068917615	
GT(ph)PPPVFTPPLPK	ddPTM_K562_Methotrexat_30min_R1	2	GTPPPVFTPPLPK	13	0	Q6NZY4-2;Q6NZY4	Q6NZY4-2	ZCCHC8	Zinc finger CCHC domain-containing protein 8	1	GT(1)PPPVFTPPLPK;GT(1)PPPVFTPPLPK	129.37	0.0010929	20484700.0	2575.8999999999996	2372.0	4009.7	2928.3	2799.2	2490.6	1897.1100000000001	2857.4	3201.2	3464.5	True	False	2462.666520295572	2763.9326828937565	3168.1187657926193	2671.580485479048	3167.3438641791668	2971.873201093779	2322.585209679523	2756.903622410262	3052.3769107211488	2837.045478308604	0.8680391411151329	0.9742292480068258	1.1166965034629601	0.9416770037369288	1.1164233666312184	1.0475239906501452	0.8186633691414094	0.9717516492029867	1.0758998874212344	1.0	11.470173562100022	-6.316193921080793	4.094273439703435	1.0077400135111168	0.8626267627610507	0.20253964411537673	0.084659022418586	0.3427648516670189	10.830586212424988	0.022023241741853307	0.12681764284595376	4.828431548739465e-07	6.316193921080793	-0.1451132507500661	
GT(ph)RS(ph)LPT(ph)VEVTEK	ddPTM_K562_Methotrexat_30min_R1	1	GTRSLPTVEVTEK	13	1	G3V3F4;Q86TS1;Q6ZU80-3;Q6ZU80-1;Q6ZU80	G3V3F4	CEP128	Centrosomal protein of 128 kDa	3	GT(1)RS(1)LPT(0.758)VEVT(0.242)EK	70.197	0.02818	8434300.0	0.0	62.18	0.0	193.65	0.0	0.0	0.0	0.0	230.22	131.53	True	False	0.0	72.4541881207141	0.0	176.67300516102097	0.0	0.0	0.0	0.0	219.51712244977608	107.70864244824098	0.0	0.6726868566329921	0.0	1.6402862495079777	0.0	0.0	0.0	0.0	2.038064146572679	1.0	6.75099020490269	-9.755332188999816	24.99944972101452	1.5190321906542021	0.3083963578134571	0.4448994687867216	0.5491883859486607	120.99620854096327	495306.7943984715	0.3905993478459606	0.13918602403525795	1.7565795038360944e-10	9.755332188999816	-1.2106358328407452	
GTAAFS(ph)PSHPLLPLR	ddPTM_K562_Methotrexat_30min_R1	2	GTAAFSPSHPLLPLR	15	0	Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3	Q5T5Y3-2	CAMSAP1	Calmodulin-regulated spectrin-associated protein 1	1	GT(0.008)AAFS(0.99)PS(0.003)HPLLPLR;GT(0.381)AAFS(0.567)PS(0.052)HPLLPLR	88.319	0.010545	15963800.0	2707.5	2306.03	2791.5	2757.05	2390.34	2404.77	2494.13	2958.9	2892.7	3263.6	True	False	2588.4815418689627	2687.062261692028	2205.602298104621	2515.3437070962723	2704.7116077100727	2869.4577683266234	3053.502142215259	2854.8338098795134	2758.219008385313	2672.5304150694074	0.9685508263155681	1.0054374859648674	0.8252861354422939	0.941184314652953	1.0120414691856106	1.0736857295044486	1.142550941608632	1.068213777393202	1.0320627195981529	1.0	11.383990651474125	-7.945037677193327	2.849866398421556	1.0716004920190625	0.9320221288843177	0.5467308837798954	0.05473798309508127	0.2011575023553661	3.324221026879139	0.01925389293010189	0.02166503957155214	1.1349123521440617e-08	7.945037677193327	-0.1395783631347448	
GTDTQTPAVLS(ph)PSK	ddPTM_K562_Methotrexat_30min_R1	1	GTDTQTPAVLSPSK	14	0	P46087-2;P46087;P46087-4	P46087-2	NOP2	Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase	1	GTDT(0.007)QT(0.277)PAVLS(0.547)PS(0.169)K	82.837	0.030702999999999998	42043000.0	2713.1	1913.5	3201.4	2294.3	2288.6	2042.5	1433.5	2578.1	2506.7	2763.7	True	False	2593.835372574213	2229.6733510612166	2529.4698897195535	2093.1622811305488	2589.5910144185636	2437.1842179531222	1754.9988656828534	2487.4267617190103	2390.164064133671	2263.1671491994503	1.1461086175149415	0.9852004752940668	1.117668171621483	0.924881877094656	1.1442332111150426	1.0768909485166516	0.7754614440668463	1.0990910514934291	1.0561146864380493	1.0	11.144127425349907														
GTDTQTPAVLS(ph)PSKTQATLKPK	ddPTM_K562_Methotrexat_30min_R1	1	GTDTQTPAVLSPSKTQATLKPK	22	2	P46087-2;P46087;P46087-4	P46087-2	NOP2	Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase	1	GTDTQT(0.002)PAVLS(0.884)PS(0.1)KT(0.009)QAT(0.005)LKPK	61.086999999999996	0.009479399999999999	20791000.0	3733.3	2010.0	6355.1	3313.7	2249.5	1887.5	1654.2	2892.6	2502.7	4429.2	True	False	3569.188602127202	2342.118335841675	5021.251357580041	3023.1930658511515	2545.348679076535	2252.232661633545	2025.1964587461273	2790.865618458714	2386.350023260596	3627.0289601744753	0.9840529649246333	0.6457401806157648	1.3843979225736587	0.8335177631737805	0.7017723616284809	0.6209580034688235	0.5583623624137556	0.7694632849924808	0.6579351997084144	1.0	11.824572549279157	-7.518822522283917	18.800226972194082	0.7004324541645938	0.9921852801716218	0.29038453883992776	0.1991820725189195	8.172472098482633	37878.999801354475	0.05683931025921252	0.07589513891628467	3.028150651890093e-08	7.518822522283917	0.291752826007028	
GTEFAESADAALQGDPALQDAGDS(ph)SRKEYFI	ddPTM_K562_Methotrexat_30min_R1	3	GTEFAESADAALQGDPALQDAGDSSRKEYFI	31	2	P04921-2;P04921-3;P04921	P04921-2	GYPC	Glycophorin-C	1	GTEFAESADAALQGDPALQDAGDS(0.34)S(0.34)RKEY(0.319)FI;GTEFAESADAALQGDPALQDAGDS(0.455)S(0.455)RKEY(0.091)FI;GTEFAESADAALQGDPALQDAGDS(0.441)S(0.441)RKEY(0.117)FI	83.435	3.0625e-05	88511000.0	3920.93	2866.11	4472.15	4708.33	2647.99	2716.74	2512.9700000000003	4111.96	4065.7300000000005	5584.0	True	False	3748.5706119890206	3339.6859619597903	3533.5068305457953	4295.558019053909	2996.247098781009	3241.7115555848018	3076.567491799817	3967.3400361188847	3876.715099720825	4572.683489933687	0.8197747821910547	0.7303558117048294	0.7727424909955966	0.9393954400102604	0.6552491781635339	0.7089297920402999	0.672814442235632	0.86761746026214	0.8477986959418975	1.0	12.158825347409408	-9.969503701347437	1.519176850949465	0.9941355175535659	0.7606107374639383	0.44480999350687866	0.08082767284467689	0.3793770283945986	1.9796782173101868	0.07928700561518408	0.02347411998320486	1.0727445051519134e-10	9.969503701347437	-0.23352478008962763	
GTENGVNGTLTSNVADS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	GTENGVNGTLTSNVADSPR	19	0	G3XAN4;Q15629-2;Q15629	G3XAN4	TRAM1	Translocating chain-associated membrane protein 1	1	GTENGVNGTLTSNVADS(1)PR;GTENGVNGTLTSNVADS(1)PR;GTENGVNGTLTSNVADS(1)PR;GTENGVNGTLTSNVADS(1)PR	340.73	0.0	225340000.0	7909.5	7925.799999999999	9065.8	8297.3	7942.8	8355.5	8084.099999999999	9335.7	8744.9	9129.6	True	False	7561.807850567887	9235.403734434794	7163.0124714873255	7569.888591389313	8987.417420835345	9970.08212147236	9897.165211068534	9007.358139474873	8338.351507736277	7476.140972367226	1.0114587028946214	1.2353169594540858	0.9581162926117547	1.012539573473613	1.2021465959582611	1.3335866937666183	1.3238334118698034	1.2048138435012423	1.1153282874889454	1.0	12.868078057894113	-7.827052600077838	6.855509191271521	1.2211984974829073	1.060690215142713	0.25754094826349627	0.11381668518253996	0.27107454206758536	22.732097154391848	0.035734431123012174	0.04081704967657016	1.4891807029469661e-08	7.827052600077838	-0.1605082823401942	
GTEPIVVDPFDPRGSGS(ph)LLR	ddPTM_K562_Methotrexat_30min_R1	3	GTEPIVVDPFDPRGSGSLLR	20	1	A0A0U1RR39;P22681;A0A1B0GW38;A0A0U1RQX8	A0A0U1RR39	CBL	E3 ubiquitin-protein ligase CBL	1	GTEPIVVDPFDPRGS(0.381)GS(0.619)LLR;GTEPIVVDPFDPRGS(0.41)GS(0.59)LLR;GTEPIVVDPFDPRGS(0.414)GS(0.586)LLR	94.389	0.00051347	15895000.0	4636.0	4137.1	4536.1	4788.2	4656.2	3878.5	4077.1	5073.1	4947.3	5047.0	True	False	4432.206990989662	4820.685456323679	3584.034599474254	4368.425940160088	5268.57191354353	4627.965233454675	4991.493460255009	4894.676197539548	4717.301102839794	4132.939393570075	1.0724103522749886	1.1664060363003588	0.8671877949747355	1.0569779820522842	1.2747759915715786	1.119775731687416	1.2077344923133042	1.184308728348295	1.1413913086117002	1.0	12.012952492498181	-7.551386149174689	23.596048652750245	1.1648879330195727	1.0340486972012404	0.25348930763316646	0.09533952766615	138.52765649071327	114660.3392264511	0.02747493597804369	0.035470971815031505	2.809401764321572e-08	7.551386149174689	-0.13083923581833234	
GTEPS(ph)PGGT(ph)PQPSRPVS(ph)PAGPPEGVPEEAQPPR	ddPTM_K562_Methotrexat_30min_R1	2	GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR	33	1	I3L1Q2;Q8WUZ0;Q8WUZ0-2	I3L1Q2	BCL7C	B-cell CLL/lymphoma 7 protein family member C	3	GT(0.067)EPS(0.933)PGGT(0.942)PQPS(0.181)RPVS(0.877)PAGPPEGVPEEAQPPR;GT(0.073)EPS(0.93)PGGT(0.986)PQPS(0.122)RPVS(0.888)PAGPPEGVPEEAQPPR	78.45	5.2989e-06	28436000.0	2328.99	2158.3	2396.0	2299.8999999999996	2033.09	2006.01	2399.1	2357.36	2208.95	2366.4	True	False	2226.6103882538837	2514.9223901726787	1893.1123432773325	2098.271337825108	2300.4769708573967	2393.643041887951	2937.1592456642693	2274.450312635632	2106.2563966442212	1937.8220291151645	1.1490272867166156	1.2978087524998496	0.976927867902169	1.0827987845628975	1.187145638914955	1.2352233620653597	1.5157012365090181	1.1737147573217426	1.0869194203587242	1.0	10.920220363411461	-7.986675791322972	4.947319155408986	1.231115138856538	1.1282037659146165	0.039771207796026165	0.14584795595717553	0.4883274172458551	33.33470119997553	0.04864025723664661	0.05333567971534086	1.0311556094792479e-08	7.986675791322972	-0.10291137294192154	
GTEPSPGGT(ph)PQPSRPVS(ph)PAGPPEGVPEEAQPPR	ddPTM_K562_Methotrexat_30min_R1	2	GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR	33	1	I3L1Q2;Q8WUZ0;Q8WUZ0-2	I3L1Q2	BCL7C	B-cell CLL/lymphoma 7 protein family member C	2	GT(0.005)EPS(0.333)PGGT(0.556)PQPS(0.387)RPVS(0.719)PAGPPEGVPEEAQPPR;GT(0.083)EPS(0.356)PGGT(0.518)PQPS(0.245)RPVS(0.798)PAGPPEGVPEEAQPPR	52.463	0.0067585	44846000.0	1844.26	1889.95	2190.8	1658.88	1860.6999999999998	1374.35	1807.43	2062.1000000000004	1729.08	1895.6799999999998	True	False	1763.1885386545714	2202.232113842771	1730.9810190534133	1513.4485659773545	2105.414664217697	1639.9236866310262	2212.792186816294	1989.574774190593	1648.6954482037133	1552.3539824852242	1.135816030717307	1.418640425244461	1.1150684950620722	0.9749377932180233	1.356272272930338	1.0564109121590994	1.4254430444232498	1.281650188448259	1.0620615315871786	1.0	10.600241856713879	-9.90393970033303	4.9964172822147646	1.002585274692367	1.2207816408864074	0.21991714050942912	0.1446787259035176	0.2913344858836378	10.956003598363772	0.138041251051927	0.03605160239846292	1.2475567193735909e-10	9.90393970033303	0.21819636619404048	
GTEPSPGGTPQPS(ph)RPVS(ph)PAGPPEGVPEEAQPPR	ddPTM_K562_Methotrexat_30min_R1	1	GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR	33	1	I3L1Q2;Q8WUZ0;Q8WUZ0-2	I3L1Q2	BCL7C	B-cell CLL/lymphoma 7 protein family member C	2	GT(0.012)EPS(0.19)PGGT(0.19)PQPS(0.644)RPVS(0.964)PAGPPEGVPEEAQPPR	71.118	4.1991000000000005e-05	30852000.0	1218.3	1289.5	1567.0	1419.1	1493.7	1184.4	1486.6	1492.1	1700.0	1381.1	True	False	1164.7449907512305	1502.5679572476809	1238.1081143220283	1294.689706294887	1690.1477314677124	1413.2685374510045	1820.0078923781844	1439.6219972696692	1620.9673710564646	1130.9694068673734	1.0298642772110085	1.3285664034092517	1.094731746768831	1.144761032821388	1.4944239173977167	1.249608105108307	1.6092459100369043	1.2729097608901907	1.433254835377304	1.0	10.143344189093556	-7.739571421418438	24.945464635305406	1.3655045705989044	1.15836193886493	0.23290015382759055	0.16909599389200217	309.2149782535024	352729.70607083244	0.04636261986224558	0.059800522512337764	1.821497496104164e-08	7.739571421418438	-0.2071426317339744	
GTEPSPGGTPQPSRPVS(ph)PAGPPEGVPEEAQPPR	ddPTM_K562_Methotrexat_30min_R1	3	GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR	33	1	I3L1Q2;Q8WUZ0;Q8WUZ0-2	I3L1Q2	BCL7C	B-cell CLL/lymphoma 7 protein family member C	1	GTEPSPGGT(0.003)PQPS(0.008)RPVS(0.99)PAGPPEGVPEEAQPPR;GT(0.001)EPS(0.056)PGGT(0.065)PQPS(0.019)RPVS(0.859)PAGPPEGVPEEAQPPR;GTEPS(0.044)PGGT(0.166)PQPS(0.128)RPVS(0.662)PAGPPEGVPEEAQPPR	92.62299999999999	1.7655e-07	470246000.0	1837.3200000000002	1810.3899999999999	2265.87	2010.46	1838.6699999999998	1958.19	1665.8400000000001	2101.14	1893.58	2011.7499999999998	True	False	1756.5536127448495	2109.526176131545	1790.2948519456634	1834.206093240518	2080.4873330774185	2336.5825036737438	2039.4470250499649	2027.2417152625094	1805.5478791088826	1647.4025807439268	1.066256441064717	1.280516493533071	1.0867379187528101	1.1133927521299833	1.2628894463294584	1.418343355161311	1.2379773158598553	1.2305684954961382	1.0959967528359347	1.0	10.685977438555112	-9.95742319495512	3.2881445873835777	1.0010909549175055	1.2162774390636697	0.3252633668479772	0.09898867590286745	0.26297500346518393	6.280333260189747	0.1012697260199631	0.02699035712511215	1.103003282899398e-10	9.95742319495512	0.21518648414616415	
GTEPSTDGET(ph)SEAESNYSVSEHHDTILR	ddPTM_K562_Methotrexat_30min_R1	1	GTEPSTDGETSEAESNYSVSEHHDTILR	28	0	Q5QJE6;J3KP30;E9PRB3	Q5QJE6	DNTTIP2	Deoxynucleotidyltransferase terminal-interacting protein 2	1	GT(0.004)EPS(0.027)T(0.076)DGET(0.686)S(0.196)EAES(0.009)NY(0.002)SVSEHHDTILR	57.058	0.007670100000000001	31915000.0	2651.4	2610.0	3806.6	2534.9	2090.0	2380.2	2048.2	2541.5	2217.6	2294.4	True	False	2534.847630696718	3041.258137585457	3007.646680266901	2312.6692526861452	2364.8716333718426	2840.1399635603498	2507.5609882745866	2452.114004464086	2114.504260032243	1878.8619268094278	1.349139920569494	1.6186703739055173	1.6007811097510016	1.2308883477208905	1.2586723907848447	1.5116278226912114	1.3346169574753044	1.3051060162936619	1.1254175891588634	1.0	10.875643335014297	-9.833024065076202	0.28288411534903013	0.9232225307901764	1.5397863720971232	0.5662531930800143	0.12429684277387774	1.5507126568426501	0.42991121722573383	0.35857531152213684	0.2458731979976848	1.468844883923942e-10	9.833024065076202	0.6165638413069469	
GTFS(ph)DQELDAQSLDDEDDNMHHAVYPAVNR	ddPTM_K562_Methotrexat_30min_R1	2	GTFSDQELDAQSLDDEDDNMHHAVYPAVNR	30	0	Q9P270;D6RIF6	Q9P270	SLAIN2	SLAIN motif-containing protein 2	1	GT(0.304)FS(0.695)DQELDAQS(0.001)LDDEDDNMHHAVYPAVNR;GT(0.216)FS(0.78)DQELDAQS(0.004)LDDEDDNMHHAVYPAVNR	70.54	0.0010550999999999998	46664000.0	2871.3	2339.02	2884.5	3168.4	2363.4	2446.5	2299.4700000000003	2966.8	2687.4	3195.3999999999996	True	False	2745.0810899975445	2725.503298457906	2279.082869024819	2890.631291258348	2674.2285255076613	2919.2515002312425	2815.1846820172645	2862.455962401754	2562.4633605747904	2616.6820959409188	1.0490693899177903	1.0415874754850023	0.8709819479256595	1.1046933426656558	1.0219921363989957	1.1156309376517992	1.0758604136070902	1.0939257645558425	0.9792795863699935	1.0	11.353522944826146														
GTGQS(ph)DDSDIWDDTALIK	ddPTM_K562_Methotrexat_30min_R1	2	GTGQSDDSDIWDDTALIK	18	0	B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637	B4DP61	SMN2;SMN1	Survival motor neuron protein	1	GT(0.001)GQS(0.997)DDS(0.002)DIWDDTALIK;GTGQS(0.979)DDS(0.021)DIWDDTALIK	284.65	3.2090999999999994e-155	67874800.0	5122.8	4532.2	8917.9	5527.4	4387.7	4391.9	4255.8	5361.5	4473.5	6383.2	True	False	4897.607845867525	5281.069015771957	7046.154660314239	5042.821423842127	4964.759457294561	5240.572517418999	5210.271484180734	5172.9330060728735	4265.527961424173	5227.140625527348	0.9369573533088986	1.0103169962524527	1.3479940879921088	0.9647380442023931	0.9498040731960763	1.002569644257523	0.996772778359122	0.9896295846356715	0.8160346673270988	1.0	12.351806257241291	-7.454198244725006	24.999905474844372	0.9621753719645594	1.1007379354132014	0.24698133713218806	0.11075147900912918	249.59623841081833	90853.0391607659	0.03164003813920491	0.04692974010457331	3.513999984753735e-08	7.454198244725006	0.13856256344864204	
GTGQSDDS(ph)DIWDDTALIK	ddPTM_K562_Methotrexat_30min_R1	1	GTGQSDDSDIWDDTALIK	18	0	B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637	B4DP61	SMN2;SMN1	Survival motor neuron protein	1	GTGQS(0.015)DDS(0.774)DIWDDT(0.212)ALIK	167.92	5.8359e-12	13239000.0	2887.2	2638.7	5392.3	2957.5	2798.6	2401.4	2077.8	2929.9	2931.5	3137.0	True	False	2760.282145035666	3074.700324768869	4260.529920139549	2698.2205668149736	3166.664953662411	2865.43656352148	2543.799541762003	2826.8537563168707	2795.215204854132	2568.858901848489	1.0745168382153778	1.1969128871018913	1.6585301423421015	1.0503576373437244	1.232712684758106	1.1154511294721483	0.9902449449175843	1.1004316952880264	1.0881155063996557	1.0	11.326911935043357	-8.05831290716404	1.4383381296969893	1.0542395626781265	1.2794695643742477	0.2599102247876456	0.15834103595164006	0.5781968610670414	2.4395581726543285	0.06824830057092847	0.0728173601035859	8.743535805207714e-09	8.05831290716404	0.22523000169612128	
GTGQSDDSDIWDDT(ph)ALIK	ddPTM_K562_Methotrexat_30min_R1	3	GTGQSDDSDIWDDTALIK	18	0	B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637	B4DP61	SMN2;SMN1	Survival motor neuron protein	1	GT(0.004)GQS(0.301)DDS(0.122)DIWDDT(0.574)ALIK;GTGQS(0.073)DDS(0.023)DIWDDT(0.904)ALIK;GTGQS(0.017)DDS(0.001)DIWDDT(0.983)ALIK	194.27	3.1109e-15	81277500.0	6245.67	5333.1900000000005	11632.5	7002.0	5417.73	5469.75	5037.96	6697.6	5792.87	8297.3	True	False	5971.117825154097	6214.408998769882	9190.997217518187	6388.145531306323	6130.25645658738	6526.7017753483915	6167.850774576619	6462.041611764182	5523.560738101094	6794.578567519123	0.8788062078932303	0.9146128692186017	1.352695700871711	0.940182745379424	0.9022276209877864	0.9605749216807511	0.907760608444721	0.9510584869318306	0.8129364732797386	1.0	12.730168355536234	-7.491831922319257	24.999860171001323	0.9211580338540791	1.0538196176899994	0.1679116866409408	0.12658936250983227	1171.6315402902264	943434.4022538234	0.036214173149801306	0.05364130950840948	3.222315628557488e-08	7.491831922319257	0.1326615838359203	
GTHHSQNPSPGS(ph)SSPRPSVVGR	ddPTM_K562_Methotrexat_30min_R1	2	GTHHSQNPSPGSSSPRPSVVGR	22	1	J3KTD2;J3KT00;A0A1W2PQI7;A0A1W2PPP3;Q86VV8-2;Q86VV8-4;Q86VV8-3;Q86VV8	J3KTD2	RTTN	Rotatin	1	GTHHSQNPSPGS(0.312)S(0.312)S(0.312)PRPS(0.064)VVGR;GTHHSQNPSPGS(0.308)S(0.308)S(0.308)PRPS(0.076)VVGR	72.77199999999999	0.0035042000000000003	7028900.0	2914.1	2492.0	3474.25	3204.55	3441.1000000000004	3511.5	2745.04	3532.1099999999997	3803.7	3851.3	True	False	2785.9996532448167	2903.760643242514	2745.0524034354216	2923.6120768848427	3893.664965356865	4190.047677523809	3360.685096793903	3407.883689280992	3626.866817227927	3153.7922501399703	0.8833808419439073	0.9207203306158295	0.8703973457077243	0.9270147952057045	1.2345977973609574	1.328574409851457	1.065601292109444	1.080566955267819	1.1500018167230137	1.0	11.622871913222877	-7.687994780181733	6.5830889856112975	1.1522552941922668	0.896566459297523	0.6515138428235154	0.08697315790802777	0.13658948406934987	9.738087558775996	0.027230379609268853	0.03509535288347514	2.0511868320472798e-08	7.687994780181733	-0.2556888348947438	
GTHS(ph)PPLTPEVAGLHGPRPL	ddPTM_K562_Methotrexat_30min_R1	1	GTHSPPLTPEVAGLHGPRPL	20	1	O75808	O75808	CAPN15	Calpain-15	1	GT(0.096)HS(0.871)PPLT(0.033)PEVAGLHGPRPL	67.55199999999999	0.022857	0.0	1056.0	1078.3	916.22	1109.6	1080.0	1177.7	1043.0	1295.3	1337.3	1304.4	True	False	1009.5795044186982	1256.4707470338697	723.9179428871277	1012.3230907651382	1222.038930163441	1405.2738572746089	1276.919300249191	1249.7435648169708	1275.1292148904759	1068.160520105569	0.9451571045884741	1.1762939402681625	0.6777239275006915	0.9477256196148194	1.1440592562273915	1.3156017572487346	1.195437648381715	1.1699960270891265	1.1937617903762738	1.0	10.060912752060858	-7.79706547146814	4.607821151507277	1.1901870152745264	0.9337992982373524	0.4225786106686771	0.1331506407433464	0.1868041798398608	8.999608711293961	0.041678002973289725	0.049389264480472345	1.595638580801329e-08	7.79706547146814	-0.256387717037174	
GTKGSEDS(ph)PPKHAGNNESHSSR	ddPTM_K562_Methotrexat_30min_R1	1	GTKGSEDSPPKHAGNNESHSSR	22	2	P48651;P48651-2	P48651	PTDSS1	Phosphatidylserine synthase 1	1	GT(0.057)KGS(0.074)EDS(0.869)PPKHAGNNESHSSR	42.638999999999996	0.032036	4390800.0	139.07	145.24	251.55	88.505	0.0	0.0	0.0	0.0	0.0	131.17	True	False	132.95664931771614	169.23844134211186	198.75309263414564	80.74590406287717	0.0	0.0	0.0	0.0	0.0	107.41384193671226	1.237798098647785	1.5755738579933336	1.8503489778463567	0.7517271760044882	0.0	0.0	0.0	0.0	0.0	1.0	6.7470361086724795	-7.5058353649043825	3.487221854495342	0.10501871188749215	1.5484987206831842	0.7816980973208213	0.3266475954055666	0.09568438620491043	2.4501382600172747	0.09335431369014867	0.13480684817836863	3.120072136589926e-08	7.5058353649043825	1.443480008795692	
GTLDEEDEEADS(ph)DTDDIDHR	ddPTM_K562_Methotrexat_30min_R1	4	GTLDEEDEEADSDTDDIDHR	20	0	Q9HCN4-3;Q9HCN4-2;Q9HCN4-4;Q9HCN4;Q9HCN4-5	Q9HCN4-3	GPN1	GPN-loop GTPase 1	1	GTLDEEDEEADS(0.71)DT(0.29)DDIDHR;GTLDEEDEEADS(0.996)DT(0.004)DDIDHR;GTLDEEDEEADS(0.999)DT(0.001)DDIDHR;GTLDEEDEEADS(0.995)DT(0.005)DDIDHR	162.98	7.9505e-16	799410000.0	15472.1	14462.099999999999	17161.6	15079.6	15019.8	14342.0	13087.800000000001	18146.5	17244.7	17732.5	True	False	14791.96500976945	16851.716211331288	13559.61468714034	13757.594880589379	16995.166965989658	17113.38852087327	16023.072308534387	17508.277309465895	16442.99766097494	14520.9724185618	1.0186621517758168	1.1605087955259907	0.9337952236454509	0.9474293101062148	1.1703876624863743	1.1785290976104088	1.103443477934886	1.205723473937978	1.1323620200501354	1.0	13.825850448341926	-7.774687105486575	24.97600657016551	1.142951676996862	1.0196778832782145	0.344645535849442	0.07777987878800491	249.24370649826832	469898.80915148533	0.02421600262896768	0.027613861491068457	1.6800139755594473e-08	7.774687105486575	-0.12327379371864744	
GTLTLCPYHSDR	ddPTM_K562_Methotrexat_30min_R1	1	GTLTLCPYHSDR	12	0	Q13200;Q13200-3;Q13200-2	Q13200	PSMD2	26S proteasome non-ATPase regulatory subunit 2	0		90.79299999999999	0.024961	9425700.0	3252.2	3103.9	3244.3	3123.4	3071.2	2726.8	2953.3	3777.1	3594.4	3588.6	False	True	3109.237182074327	3616.7667177208814	2563.3657659827436	2849.576371391341	3475.1166317758875	3253.7155082078666	3615.652703188817	3644.257252119341	3427.297128544328	2938.669765755019	1.058042389895921	1.230749626878079	0.8722877935636806	0.9696824068488732	1.1825475159788978	1.1072069227118155	1.2303705388481663	1.2401043814404369	1.1662750161598265	1.0	11.5209475293009	-7.775574575434341	24.946014306329197	1.1678597741821082	1.0353802895018978	0.237172063597324	0.10526107240078816	322.333694044282	568857.0181148823	0.0335518309209896	0.03822463688567792	1.6765844141844514e-08	7.775574575434341	-0.13247948468021042	
GTMDDISQEEGSS(ph)QGEDSVSGSQR	ddPTM_K562_Methotrexat_30min_R1	2	GTMDDISQEEGSSQGEDSVSGSQR	24	0	V9GY57;G8JLG1;Q14683	V9GY57	SMC1A	Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A	1	GTMDDISQEEGS(0.273)S(0.723)QGEDS(0.003)VS(0.001)GSQR;GTMDDISQEEGS(0.285)S(0.712)QGEDS(0.002)VS(0.001)GSQR	102.46	1.1150999999999999e-05	23552000.0	1940.1	1897.3	2177.2	2408.4	2207.5	2016.08	1934.29	2330.1	2157.93	2216.6	True	False	1854.8155270101463	2210.796576414134	1720.2354731984183	2197.259311282226	2497.8249429035145	2405.6589268694875	2368.103771120812	2248.1490622867486	2057.608305308163	1815.1522607068412	1.0218512061835847	1.217967563532783	0.9477086360394575	1.2105096408973361	1.3760966487355903	1.3253207342136115	1.3046309240188176	1.238545719250733	1.133573392078363	1.0	10.82587485577749	-6.259510162916432	23.30559356721691	1.2083085065196653	1.0218510674684602	0.13041226992432542	0.1300097026974355	138.11517503235922	1668121.1707751006	0.03414532646037593	0.21350802505360283	5.5016104605251e-07	6.259510162916432	-0.18645743905120504	
GTNTS(ph)SPYDAGADYLR	ddPTM_K562_Methotrexat_30min_R1	1	GTNTSSPYDAGADYLR	16	0	Q9UJJ2;Q8ND82	Q9UJJ2	ZNF280C	Zinc finger protein 280C	1	GTNT(0.055)S(0.472)S(0.472)PYDAGADYLR	178.02	2.9028000000000003e-07	20082000.0	1632.1	1293.8	1383.0	1571.6	1281.1	1074.2	1230.5	1658.4	1406.1	1658.3	True	False	1560.3548382213598	1507.578459160178	1092.727199813252	1433.820268066412	1449.5871050299843	1281.7739470870224	1506.4709481846885	1600.0731320099326	1340.730717907349	1357.9658007444534	1.1490383906324844	1.1101740988865147	0.8046794692577718	1.0558588937073188	1.0674695226016022	0.9438926564898308	1.1093585327103397	1.178286766229866	0.9873081613486466	1.0	10.407231431610228	-8.797827624995813	24.99984558253966	1.0835956089996133	1.0196144343190505	0.03939838380370675	0.10313868467917306	506.45177967092684	347943.47414728167	0.04406305037000402	0.029708278784886206	1.5928408130475155e-09	8.797827624995813	-0.06398117468056275	
GTNTSS(ph)PYDAGADYLR	ddPTM_K562_Methotrexat_30min_R1	1	GTNTSSPYDAGADYLR	16	0	Q9UJJ2;Q8ND82	Q9UJJ2	ZNF280C	Zinc finger protein 280C	1	GTNT(0.003)S(0.096)S(0.9)PYDAGADYLR	211.45	3.6139999999999997e-22	17454000.0	1700.8	1366.8	1600.4	1704.2	1544.6	1243.7	1502.4	1731.3	1412.8	1756.1	True	False	1626.0348684804171	1592.640468372338	1264.497910760035	1554.7954319411933	1747.7419736393056	1484.0274231913327	1839.3514445775502	1670.4091976898187	1347.119236369749	1438.053273043078	1.13071949347158	1.1074975442336268	0.8793122858962096	1.0811806913460698	1.2153527316417787	1.0319697128124943	1.2790565405725765	1.1615767155517474	0.936765877608343	1.0	10.489901406427792	-6.528286386300702	24.99893860341622	1.0837196838306133	1.124914106680084	0.019812730650383248	0.1160389864312471	760.8784788846413	3517474.453996053	0.030652467206365122	0.08165865618058903	2.9628769387208105e-07	6.528286386300702	0.041194422849470724	
GTPPLT(ph)PSDSPQTR	ddPTM_K562_Methotrexat_30min_R1	1	GTPPLTPSDSPQTR	14	0	Q6NZY4-2;Q6NZY4	Q6NZY4-2	ZCCHC8	Zinc finger CCHC domain-containing protein 8	1	GT(0.013)PPLT(0.759)PS(0.227)DS(0.001)PQTR	136.33	6.8872e-05	15673000.0	838.26	788.76	989.41	809.13	774.71	842.4	913.16	994.99	1012.1	1182.1	True	False	801.4110941041832	919.0891833723778	781.7463620876568	738.1948291553673	876.5979440619614	1005.1818777007147	1117.9593750868182	959.9956377342997	965.0476919095574	968.0102352167997	0.8278952690254311	0.9494622576656274	0.8075806780210062	0.7625899007049631	0.9055668134186977	1.038400051085813	1.1549044983356351	0.9917205446895869	0.9969395537366619	1.0	9.918878491632501	-8.152209643429073	3.648752271474534	1.043596022944678	0.8422759572390544	0.6956091718667756	0.062447016154392056	0.14578684915702028	3.5406900260933343	0.02272382555774963	0.022698121038281286	7.0435298032675635e-09	8.152209643429073	-0.20132006570562355	
GTPPLTPSDS(ph)PQTR	ddPTM_K562_Methotrexat_30min_R1	2	GTPPLTPSDSPQTR	14	0	Q6NZY4-2;Q6NZY4	Q6NZY4-2	ZCCHC8	Zinc finger CCHC domain-containing protein 8	1	GTPPLTPS(0.027)DS(0.902)PQT(0.071)R;GTPPLTPS(0.024)DS(0.808)PQT(0.168)R	212.11	5.051800000000001e-19	41641000.0	1327.3400000000001	1332.1999999999998	1467.42	1623.91	1413.01	1305.35	1296.93	1157.27	1288.54	1852.1999999999998	True	False	1268.9917229120401	1552.3234064717797	1159.4285954808108	1481.5443315829257	1598.8455821391142	1557.590413172634	1587.7995667039147	1116.56815815312	1228.636056647703	1516.748631815037	0.8366526241025743	1.0234546278206769	0.764417103243644	0.9767896278304312	1.054126932177176	1.02692719182395	1.0468442386553227	0.7361590013877014	0.8100459304040643	1.0	10.566766294648673	-9.258915306843498	24.99985706257614	0.8298268516254701	0.9628212494864998	0.17938028534254702	0.10806677422709629	334.97646458247846	3317839.026409245	0.05413945472900891	0.02938229153313172	5.509151216509956e-10	9.258915306843498	0.13299439786102973	
GTPPLTPSDSPQT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	GTPPLTPSDSPQTR	14	0	Q6NZY4-2;Q6NZY4	Q6NZY4-2	ZCCHC8	Zinc finger CCHC domain-containing protein 8	1	GTPPLT(0.012)PS(0.042)DS(0.174)PQT(0.772)R	114.21	0.0037391999999999994	12735000.0	799.4	662.63	732.3	1079.6	818.81	757.67	777.02	905.31	656.68	777.56	True	False	764.2593331745327	772.1183447158053	578.6002374716154	984.9531441871331	926.4978670436356	904.0790043655039	951.2865145538124	873.4697341654073	626.1510901325639	636.7363492895478	1.2002759604148112	1.2126186067079614	0.9086967284295941	1.54687751890734	1.4550729954044486	1.4198639756851472	1.4940037829083115	1.3717918493894685	0.9833757580059712	1.0	9.31455231530148	-7.264147990469319	24.999867348847808	1.3564037552819581	1.1177392556653867	0.1882916495340019	0.1987210080962673	356.06929945097295	3286448.0742139886	0.05517429724126562	0.08613247133205094	5.443171393749358e-08	7.264147990469319	-0.23866449961657143	
GTPSQS(ph)PVVGR	ddPTM_K562_Methotrexat_30min_R1	3	GTPSQSPVVGR	11	0	C9J2I0;B8ZZY2;P52594-2;P52594-3;P52594;P52594-4	C9J2I0	AGFG1	Arf-GAP domain and FG repeat-containing protein 1	1	GTPS(0.015)QS(0.985)PVVGR;GTPS(0.004)QS(0.996)PVVGR;GTPS(0.032)QS(0.968)PVVGR	148.89	8.3437e-08	181978000.0	6887.9	6151.4	7854.200000000001	6971.200000000001	6228.299999999999	7332.9	6814.700000000001	6989.2	6973.6	7515.2	True	False	6585.116163338587	7167.814294077846	6205.710753993669	6360.045719486238	7047.430619200881	8749.87914410205	8343.069947658834	6743.385874483731	6649.398858117273	6154.12445622307	1.0700329852250057	1.1647171494605912	1.0083823943011803	1.0334606920493685	1.1451556869433306	1.4217910616438938	1.3556875566957856	1.0957506502269054	1.0804784507393868	1.0	12.58733790457018	-7.999763202251431	24.326613831878827	1.215528215923839	1.0738434295876953	0.1607112353878487	0.12466554599881464	9.896698645522717	1016391.9952625718	0.0411766261346024	0.04621393953105737	1.0005453956400559e-08	7.999763202251431	-0.14168478633614368	
GTQEVAPPTPLTPT(ph)SHTANTSPRPVSGMER	ddPTM_K562_Methotrexat_30min_R1	1	GTQEVAPPTPLTPTSHTANTSPRPVSGMER	30	1	H7BYT1;P48730-2;P48730	H7BYT1	CSNK1D	Casein kinase I isoform delta	1	GTQEVAPPT(0.002)PLT(0.041)PT(0.189)S(0.189)HT(0.189)ANT(0.189)S(0.189)PRPVS(0.014)GMER	55.413000000000004	0.016327	44762000.0	2717.5	2418.6	2692.4	2774.8	2445.5	2489.1	2923.0	2753.7	2224.1	2669.8	True	False	2598.041953842625	2818.2325408291913	2127.302033822992	2531.537592154924	2767.1261145506414	2970.0833473229445	3578.5571568824416	2656.850810187983	2120.70207645099	2186.273349109052	1.1883426904972227	1.2890577209742207	0.973026558957007	1.1579236389569372	1.2656816750194104	1.3585141805498886	1.636829703083913	1.2152418229269912	0.9700077427716055	1.0	11.094258076682753	-7.766763553653377	5.539826047844272	1.278189921465315	1.1482780078404202	0.028967300223071257	0.19068277806381423	0.4607118981157396	44.9457852435212	0.06149098921182849	0.07431940601768143	1.710946565603883e-08	7.766763553653377	-0.12991191362489474	
GTQEVAPPTPLTPTSHTANT(ph)SPRPVSGMER	ddPTM_K562_Methotrexat_30min_R1	1	GTQEVAPPTPLTPTSHTANTSPRPVSGMER	30	1	H7BYT1;P48730-2;P48730	H7BYT1	CSNK1D	Casein kinase I isoform delta	1	GTQEVAPPTPLT(0.003)PT(0.07)S(0.07)HT(0.07)ANT(0.351)S(0.351)PRPVS(0.084)GMER	63.901	0.00030118	58770000.0	2218.8	1775.0	2752.4	1972.7	2184.9	2146.1	2193.3	2008.3	2454.0	2504.2	True	False	2121.2642087161053	2068.288580158692	2174.708853771507	1799.7564538143351	2472.252646772317	2560.803451725431	2685.2033568902675	1937.6669506847234	2339.9140756309203	2050.665113805862	1.034427413054888	1.0085940245602183	1.0604895158797676	0.8776452291979253	1.2055857536797046	1.2487672582349612	1.3094304568856472	0.9448968228111008	1.1410512910556305	1.0	11.00187619476403	-7.77887268967609	24.981714457284113	1.1526144736010866	1.0008965405117807	0.2909995487216587	0.11096842639964125	312.19327808093146	447366.95415532653	0.03559694725165637	0.0404562717051663	1.663900339379692e-08	7.77887268967609	-0.15171793308930592	
GTQSIPNDS(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	2	GTQSIPNDSPAR	12	0	J3QRX6;H9KV77;Q9NQ92	J3QRX6	COPRS	Coordinator of PRMT5 and differentiation stimulator	1	GTQSIPNDS(1)PAR;GTQSIPNDS(1)PAR	169.3	2.7294e-09	19334200.0	3836.1	3916.3	4276.9	3603.2	4036.5	4175.4	4007.7	4832.5	4958.8	4435.6	True	False	3667.4696372164444	4563.4020092819665	3379.237137296672	3287.3130503288985	4567.370501485856	4982.236956495204	4906.528743632483	4662.538235912927	4728.26647034988	3632.2698581572085	1.0096908490926646	1.2563499375008325	0.9303375765728733	0.9050299616220365	1.257442502854967	1.371659362067026	1.350816138457773	1.2836431261961394	1.301738762534762	1.0	11.826655675771775	-7.86498660208769	7.229065436103224	1.287663388939314	1.0358122404866832	0.42893237720214283	0.1310787506176307	0.20515403550704672	12.692530608432332	0.04053283392565272	0.046110132546906706	1.3646252344003763e-08	7.86498660208769	-0.2518511484526309	
GTS(ph)AEQDNRFSNK	ddPTM_K562_Methotrexat_30min_R1	2	GTSAEQDNRFSNK	13	1	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2;M0R1E7	A9Z1X7	SRRM1	Serine/arginine repetitive matrix protein 1	1	GT(0.009)S(0.991)AEQDNRFSNK;GT(0.001)S(0.999)AEQDNRFSNK	130.66	0.00086556	39256000.0	11308.7	8414.1	14174.900000000001	14261.099999999999	7639.6	6979.1	7979.3	8922.3	10014.099999999999	10906.0	True	False	10811.583088655047	9804.387009753946	11199.782201469894	13010.851504786144	8644.341306367243	8327.712301354528	9768.861143315795	8608.49765179222	9548.546676762671	8930.817718699274	1.2105927395671552	1.0978151518226151	1.2540601044873954	1.4568488479553365	0.9679227119671014	0.9324691829638434	1.0938372555585623	0.9639092323839302	1.069168241646003	1.0	13.124576561319028	-7.794474222584511	24.99998418953503	1.0036066580539527	1.243559196356104	0.629195891937855	0.09396470585612944	132.82623978285906	100518.99319407908	0.03048746012767211	0.03457174374186296	1.6051875306819398e-08	7.794474222584511	0.23995253830215124	
GTSGS(ph)LADVFANTR	ddPTM_K562_Methotrexat_30min_R1	1	GTSGSLADVFANTR	14	0	Q9P265	Q9P265	DIP2B	Disco-interacting protein 2 homolog B	1	GT(0.007)S(0.042)GS(0.951)LADVFANTR	138.73	1.9644e-05	14859000.0	1180.6	860.72	900.66	1239.8	926.15	923.82	939.17	921.59	1384.2	1064.0	True	False	1128.7022376105247	1002.9393502615147	711.6237742471463	1131.1086589136778	1047.9549584915467	1102.335140381616	1149.8027796884298	889.1771573378155	1319.84884412727	871.2992896291975	1.295424260119472	1.1510847790181717	0.8167386140645141	1.298186136930111	1.202749699173437	1.2651624459039115	1.3196415897202858	1.0205186299603508	1.5148053715147223	1.0	9.767024556700944														
GTTATSAQANSTPTSVASVVTSAES(ph)PASR	ddPTM_K562_Methotrexat_30min_R1	3	GTTATSAQANSTPTSVASVVTSAESPASR	29	0	Q86YP4-2;Q86YP4;Q86YP4-3	Q86YP4-2	GATAD2A	Transcriptional repressor p66-alpha	1	GTTATSAQANSTPTSVASVVT(0.011)S(0.019)AES(0.768)PAS(0.202)R;GTTATSAQANSTPTSVASVVT(0.001)S(0.018)AES(0.927)PAS(0.054)R;GTTATSAQANSTPTSVASVVT(0.003)S(0.008)AES(0.953)PAS(0.035)R	158.64	4.7563999999999996e-36	123856000.0	5533.1	5602.3	5871.3	5223.42	5671.23	5111.780000000001	5306.900000000001	6151.7	5933.7	6426.4	True	False	5289.871549146874	6527.984852181996	4638.994366061855	4765.490878482729	6417.096149917415	6099.559139117946	6497.10741562074	5935.34122418325	5657.843582139848	5262.516686910787	1.0051980571014862	1.2404682475247535	0.8815163242332722	0.9055535900409994	1.219396826974128	1.1590574438061347	1.2346008197523997	1.12785223825436	1.0751212620783397	1.0	12.361537187489153	-7.772029989014026	24.999654567524537	1.1484798074356701	1.0157280747855462	0.23896059553683735	0.11008244970205003	312.59714518013334	737898.4082860583	0.03515444383981479	0.040267716025785376	1.6903242069123e-08	7.772029989014026	-0.13275173265012397	
GTVSFHSHSDHR	ddPTM_K562_Methotrexat_30min_R1	4	GTVSFHSHSDHR	12	0	O75534;O75534-4;E9PLT0;O75534-2;O75534-3	O75534	CSDE1	Cold shock domain-containing protein E1	0	;;;	139.76	2.4423e-06	10254200.0	2429.27	2347.33	2686.99	2900.13	2488.8199999999997	2338.04	2801.85	2754.49	2962.99	2881.94	False	True	2322.482199525766	2735.1863847120594	2123.0275188909686	2645.8801056423013	2816.1434538605317	2789.833140241426	3430.2361854297164	2657.613025440205	2825.241241627406	2359.9927394304236	0.9841056545310769	1.1589808472767538	0.8995906993355218	1.1211390871824782	1.193284795672803	1.182136323400191	1.4534943807740666	1.1261106786631943	1.1971398023492514	1.0	11.204566705773003	-7.582266571967487	3.6205331908467917	1.210668868517234	1.0257898480179142	0.28851804554789384	0.1216682928784077	0.27522164959153494	7.362286394234591	0.03621621288041441	0.04915184956074407	2.616576448451336e-08	7.582266571967487	-0.1848790204993198	
GTYFPAILNPPPS(ph)PATER	ddPTM_K562_Methotrexat_30min_R1	1	GTYFPAILNPPPSPATER	18	0	H0YGW5;F5H7J9;O75581	H0YGW5	LRP6	Low-density lipoprotein receptor-related protein 6	1	GTYFPAILNPPPS(0.997)PAT(0.003)ER	143.99	8.5397e-12	11749000.0	1464.9	1052.7	1069.6	1027.4	784.8	855.73	1080.5	1334.5	1122.9	1214.6	True	False	1400.5047500217324	1226.6407821594673	845.1055769488455	937.3294371414052	888.014955918766	1021.0877115441972	1322.8296298362911	1287.5648785982	1070.6966240937077	994.6241702853602	1.4080743177796737	1.233270635085754	0.8496732757925867	0.942395595386027	0.8928145750409345	1.026606573668167	1.3299793724666555	1.2945240192874004	1.076483616707728	1.0	9.958007680162465	-8.729647176110397	24.986333865094263	1.1997905194377863	1.044393518241304	0.08264996868868724	0.17905162716063397	413.6287090769909	325081.43172291754	0.07360574310600103	0.05700988566150618	1.8636005240006717e-09	8.729647176110397	-0.15539700119648225	
GTYVPSS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	3	GTYVPSSPTR	10	0	Q9Y4P8-4;Q9Y4P8	Q9Y4P8-4	WIPI2	WD repeat domain phosphoinositide-interacting protein 2	1	GTYVPS(0.004)S(0.996)PTR;GTYVPS(0.001)S(0.998)PTR;GTYVPS(0.003)S(0.994)PT(0.002)R	154.15	9.1171e-09	430180000.0	15443.8	14447.8	15478.6	14539.8	14838.6	13847.6	14163.800000000001	14168.199999999999	15840.1	16104.9	True	False	14764.909043883972	16835.053379389712	12229.853387584519	13265.118308495803	16790.13598992891	16523.452718006192	17340.392698820215	13669.896375387787	15103.697208395002	13188.146550328252	1.119559066737583	1.2765291404022718	0.9273367823835805	1.0058364348526014	1.273123249416045	1.2529018126201308	1.31484683102711	1.0365290014954789	1.145247905060554	1.0	13.686954203385362	-5.995872398998426	18.881345712110672	1.1442268667217452	1.0900885315789282	0.0	0.1317702803037073	13159.844923468461	1057.0118473827033	0.033229721179977995	16873.425183925974	1.0095494604176835e-06	5.995872398998426	-0.05413833514281707	
GTYVPSSPT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	GTYVPSSPTR	10	0	Q9Y4P8-4;Q9Y4P8	Q9Y4P8-4	WIPI2	WD repeat domain phosphoinositide-interacting protein 2	1	GTYVPS(0.001)S(0.494)PT(0.505)R	110.93	0.0067265	121850000.0	4858.7	4302.6	5308.8	5005.7	4739.1	4604.9	4743.9	5211.9	4953.5	5205.4	True	False	4645.117365643111	5013.531518304672	4194.555429044532	4566.85805285062	5362.37471660885	5494.731752877512	5807.840334086421	5028.594522866957	4723.212866193056	4262.651618642696	1.08972484294229	1.1761532414185585	0.9840249225856633	1.0713655399088862	1.2579903769654825	1.2890407766016618	1.36249472246004	1.1796869584355456	1.1080457163180064	1.0	12.05753543506252	-7.754456510513223	24.985892916180905	1.2211499080720691	1.0802845277423578	0.22479277564145006	0.10391783504992191	213.33956155828943	763360.4573378009	0.03143156046885786	0.03968611101784016	1.7601249107944985e-08	7.754456510513223	-0.1408653803297113	
GVAGPGPIGREPDPDS(ph)DWEPEER	ddPTM_K562_Methotrexat_30min_R1	3	GVAGPGPIGREPDPDSDWEPEER	23	1	Q9NPE2-3;Q9NPE2	Q9NPE2-3	NGRN	Neugrin	1	GVAGPGPIGREPDPDS(1)DWEPEER;GVAGPGPIGREPDPDS(1)DWEPEER;GVAGPGPIGREPDPDS(1)DWEPEER	117.08	1.4203e-06	95679000.0	4794.7	4522.7	4809.1	4819.7	4501.3	4714.1	4343.799999999999	4681.7	4876.5	5661.3	True	False	4583.930729011673	5269.999302244346	3799.7356302399903	4397.164384066994	5093.299848467308	5625.033107394274	5318.007724278462	4517.04195738718	4649.792579386384	4635.983710881371	0.9887719661854029	1.1367596676137672	0.819617985568289	0.9484857277962753	1.098644897416819	1.2133418618774374	1.147115273894573	0.9743437939147596	1.0029786274858132	1.0	12.17865978192279	-7.764403019341433	24.904343479363256	1.0822037247286467	0.9740916855961415	0.19173693336316577	0.09876388394399159	126.8609007335414	1066053.334310678	0.03252759367057133	0.03850057234687974	1.720271445661903e-08	7.764403019341433	-0.10811203913250522	
GVAPADS(ph)PEAPRR	ddPTM_K562_Methotrexat_30min_R1	2	GVAPADSPEAPRR	13	1	Q9P2G1	Q9P2G1	ANKIB1	Ankyrin repeat and IBR domain-containing protein 1	1	GVAPADS(1)PEAPRR;GVAPADS(1)PEAPRR	106.6	0.0019459	9698800.0	4230.0	3585.3	3913.4	3810.7	3788.5	3488.7	3700.3999999999996	4546.0	4229.8	5000.700000000001	True	False	4044.0542648589862	4177.709885319975	3092.030819775256	3476.621847493429	4286.75415455944	4162.841900207126	4530.3088961094	4386.1146033026735	4033.1575212321377	4095.02477222625	0.9875530649501898	1.0201916026624605	0.7550701135549618	0.8489867683030821	1.0468200787535058	1.0165608590308983	1.1062958463243944	1.0710837778200235	0.9848920935927626	1.0	11.999656463917837	-7.773733489077228	24.991146157632198	1.0435449536563979	0.9007618861572136	0.43391372928005234	0.07514930573036904	219.46486420789398	446120.71200524527	0.025093609603513926	0.02865658197698816	1.6837069745951012e-08	7.773733489077228	-0.14278306749918424	
GVDFES(ph)SEDDDDDPFMNT(ph)SSLRR	ddPTM_K562_Methotrexat_30min_R1	4	GVDFESSEDDDDDPFMNTSSLRR	23	1	P49959-2;F8W7U8;P49959;P49959-3	P49959-2	MRE11A	Double-strand break repair protein MRE11A	2	GVDFES(0.522)S(0.489)EDDDDDPFMNT(0.367)S(0.328)S(0.294)LRR;GVDFES(0.576)S(0.427)EDDDDDPFMNT(0.376)S(0.33)S(0.291)LRR;GVDFES(0.756)S(0.244)EDDDDDPFMNT(0.379)S(0.331)S(0.29)LRR;GVDFES(0.58)S(0.42)EDDDDDPFMNT(0.41)S(0.328)S(0.262)LRR	108.49	3.0582e-06	174915000.0	5560.219999999999	5136.93	6323.459999999999	6356.7	4868.82	4889.97	5300.799999999999	6114.8099999999995	5642.04	6407.4800000000005	True	False	5315.799386419439	5985.7203696194865	4996.2521611938555	5799.41798041344	5509.155170331814	5834.887495845398	6489.63933534124	5899.7486663926975	5379.742791879653	5247.0232822493335	1.013107642270766	1.1407840307987889	0.9522069738276489	1.1052777295715184	1.0499582094421558	1.1120376605883964	1.2368230492316803	1.124399178168607	1.02529424827965	1.0	12.357283476226787	-8.276602757780077	8.485991393943214	1.1161283333281846	1.0545512497646223	0.06768092759587929	0.07655720918781489	0.4667577418737514	221.88364925979985	0.026329564902125194	0.0239143823705425	5.289288333276436e-09	8.276602757780077	-0.061577083563562285	
GVDLLLEGVQGES(ph)SPTRR	ddPTM_K562_Methotrexat_30min_R1	3	GVDLLLEGVQGESSPTRR	18	1	F5H7T0;F6RJM5;Q96S38-2;Q96S38	F5H7T0	RPS6KC1	Ribosomal protein S6 kinase delta-1	1	GVDLLLEGVQGES(0.489)S(0.479)PT(0.032)RR;GVDLLLEGVQGES(0.818)S(0.182)PTRR;GVDLLLEGVQGES(0.831)S(0.169)PTRR	151.42	3.8478e-13	65016000.0	6645.2	6225.8	6897.3	7128.099999999999	6454.2	6592.299999999999	6460.7	6885.700000000001	7260.1	7665.5	True	False	6353.084964737809	7254.50762949408	5449.650987181446	6503.190540089201	7303.0404287600695	7866.16867564864	7909.676436356609	6643.526028148084	6922.579535651201	6277.203669786291	1.012088391414915	1.1556909750135702	0.8681653924042552	1.0360012008835462	1.1634225704530474	1.2531326191486225	1.260063692759852	1.0583575709236568	1.1028126375716085	1.0	12.61590630394213	-7.72039869383532	5.789363852081119	1.1543713881179487	1.0155108189487416	0.2593035913302709	0.09913879521397134	0.24686493466644063	20.334739209621745	0.030582175673298212	0.03890649900847013	1.903712257253394e-08	7.72039869383532	-0.13886056916920708	
GVEEEEEDGEMRE	ddPTM_K562_Methotrexat_30min_R1	3	GVEEEEEDGEMRE	13	1	P62306	P62306	SNRPF	Small nuclear ribonucleoprotein F	0	;;	147.74	9.015600000000001e-09	86199000.0	7049.599999999999	7156.5	7312.000000000001	7025.8	5858.1	5925.0	6494.7	7612.900000000001	7541.7	8627.7	False	True	6739.708024952701	8338.98998529898	5777.311124392262	6409.859022258202	6628.542830361525	7069.922394796689	7951.301801848915	7345.149991967208	7191.088013115613	7065.139925877663	0.9539383643722336	1.180300754519462	0.8177206941410405	0.907251532100681	0.9382040412367486	1.000676910715032	1.1254273638269336	1.039632628515105	1.017826693959257	1.0	12.7865024182391	-8.52744938380297	24.612542557498763	1.0510283644196348	0.9618199976851372	0.16752548497421937	0.09025924893332411	202.53920719474786	1090636.9115118743	0.03561254275977159	0.02769856639085946	2.9685927071440455e-09	8.52744938380297	-0.08920836673449761	
GVEICIAT(ph)PGR	ddPTM_K562_Methotrexat_30min_R1	1	GVEICIATPGR	11	0	J3KTA4;P17844-2;P17844;J3QSF1;J3KRZ1;A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2	J3KTA4;A0A1X7SBZ2	DDX5;DDX17	Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17	1	GVEICIAT(1)PGR	93.62299999999999	0.031882	14056000.0	1859.6	1341.1	1613.5	1564.8	1794.7	1781.8	1722.7	1507.7	1649.8	1797.0	True	False	1777.854210622169	1562.6939801976455	1274.8483997821272	1427.6164135087306	2030.734507374375	2126.107632582066	2109.0593274585644	1454.673336427504	1573.1011580993845	1471.5458867139741	1.2081541096840647	1.0619403678176893	0.8663327533937246	0.9701473983231743	1.3800008043983552	1.4448123240857658	1.4332270209855198	0.9885341324121755	1.0690126433041023	1.0	10.523116814709697	-7.746225452646052	24.979393832141625	1.240666724992637	1.0177140291620816	0.2157535851628748	0.17678452197895803	360.94119533117396	592618.590148528	0.05702325555564675	0.07333038224778743	1.7938021794983635e-08	7.746225452646052	-0.22295269583055544	
GVESSDVHPAPTVQQMS(ph)SPKPAEER	ddPTM_K562_Methotrexat_30min_R1	1	GVESSDVHPAPTVQQMSSPKPAEER	25	1	Q5T481	Q5T481	RBM20	RNA-binding protein 20	1	GVESSDVHPAPT(0.152)VQQMS(0.424)S(0.424)PKPAEER	68.40100000000001	0.0032383000000000004	0.0	860.29	1050.2	1223.9	1099.1	937.06	709.88	842.94	1139.2	1156.9	1024.4	True	False	822.4726816821604	1223.7276996522028	967.0201155831087	1002.743609462836	1060.2998147212527	847.0542632267135	1031.9907525906553	1099.1336902952928	1103.115971514837	838.8712333610437	0.9804516461803316	1.4587789531763808	1.1527634720630726	1.195348665664952	1.2639601556880518	1.0097548104407914	1.230213543568366	1.310253167093923	1.31500035720031	1.0	9.712305563909862														
GVGDDQLGEES(ph)EERDDHLLPM	ddPTM_K562_Methotrexat_30min_R1	4	GVGDDQLGEESEERDDHLLPM	21	1	H0YF90;F5GX30;P20645	H0YF90	M6PR	Cation-dependent mannose-6-phosphate receptor	1	GVGDDQLGEES(1)EERDDHLLPM;GVGDDQLGEES(1)EERDDHLLPM;GVGDDQLGEES(1)EERDDHLLPM;GVGDDQLGEES(1)EERDDHLLPM	88.16799999999999	0.0010948	182467000.0	9331.2	7681.7	10568.9	10121.9	8791.2	7688.5	8291.1	9215.9	9581.5	10923.5	True	False	8921.0116208634	8950.970358425366	8350.632322564188	9234.528742263565	9947.396891530409	9174.193811374578	10150.590230389329	8891.771573378152	9136.058156339719	8945.148299120812	0.997301701721392	1.0006508622450816	0.93353760533908	1.0323505472984942	1.112043820727724	1.0256055578504246	1.1347593009035966	0.9940328853186361	1.021342279729188	1.0	13.12688968517657	-7.505961207690008	24.05851313149854	1.052824708853927	0.9800841084940153	0.31984821097556915	0.045918567402445515	506.57075571501764	720396.6785586824	0.012918318778831673	0.01862666051543898	3.119168183846641e-08	7.505961207690008	-0.07274060035991181	
GVGS(ph)PEPGPTAPYLGR	ddPTM_K562_Methotrexat_30min_R1	4	GVGSPEPGPTAPYLGR	16	0	Q9C0B5-2;Q9C0B5	Q9C0B5-2	ZDHHC5	Palmitoyltransferase ZDHHC5	1	GVGS(1)PEPGPTAPYLGR;GVGS(1)PEPGPTAPYLGR;GVGS(1)PEPGPTAPYLGR;GVGS(0.892)PEPGPT(0.108)APYLGR	217.39	5.1447e-30	250951000.0	4743.55	4290.139999999999	4971.16	4645.67	3612.79	3495.2000000000003	3535.04	3789.5600000000004	4275.11	4529.4	True	False	4535.029221766398	4999.012715088458	3927.7814509209265	4238.391323967983	4087.935209727013	4170.597933214072	4327.862706762127	3656.279026856947	4076.3610692218854	3709.081769216625	1.2226824599567179	1.347776357096671	1.0589632947753782	1.142706359062866	1.1021421106578633	1.1244286841632294	1.1668286050421022	0.9857639314404141	1.0990216239106616	1.0	11.856846358041691	-3.0000000000175704	0.21381167811154542	1.0136350063297592	2.386201170378816	0.4997280979393097	0.07136521637529618	41.50690947969576	0.5217518681854756	0.11552329746495334	19.489941766040687	0.0009999999999595426	3.0000000000175704	1.372566164049057	
GVGVALDDPYENYRR	ddPTM_K562_Methotrexat_30min_R1	2	GVGVALDDPYENYRR	15	1	J3QK89;Q8IWX8	J3QK89	CHERP	Calcium homeostasis endoplasmic reticulum protein	0	;	143.76	5.3548e-07	17462500.0	1864.9299999999998	1962.38	2197.56	2342.21	2323.6000000000004	1855.3400000000001	1960.9299999999998	2385.5	2198.3999999999996	2205.6800000000003	False	True	1782.949910204131	2286.629940243276	1736.3221874342803	2136.872085815621	2629.194127896085	2213.858196786851	2400.7184692594888	2301.600612885727	2096.196863841489	1806.2099785238047	0.9871221681885048	1.2659823428237913	0.9613069399900874	1.1830695828411173	1.455641458721702	1.2256925956063052	1.3291469418309654	1.2742707881432476	1.1605499298341202	1.0	10.818749905811785	-6.253768463781498	23.491544347787592	1.2186284402652245	0.9871219001400314	0.1784437435906392	0.13871848504220302	690.949554884244	2115853.1786619807	0.035206474372240476	0.350458052165989	5.574828815967887e-07	6.253768463781498	-0.23150654012519312	
GVHIHQAGGS(ph)PPASSTSSSSLTNDVAK	ddPTM_K562_Methotrexat_30min_R1	4	GVHIHQAGGSPPASSTSSSSLTNDVAK	27	0	Q8N122;Q8N122-3;I3L436	Q8N122	RPTOR	Regulatory-associated protein of mTOR	1	GVHIHQAGGS(0.782)PPAS(0.01)S(0.01)T(0.162)S(0.027)S(0.008)SSLTNDVAK;GVHIHQAGGS(0.999)PPASST(0.001)SSSSLTNDVAK;GVHIHQAGGS(1)PPASSTSSSSLTNDVAK;GVHIHQAGGS(0.998)PPASST(0.001)SS(0.001)SSLTNDVAK	174.85	2.9444e-35	145628000.0	14356.7	12662.7	19537.4	14184.2	13146.6	12183.8	10635.6	14557.599999999999	14371.7	16824.9	True	False	13725.596658227194	14754.995945901677	15436.76673436834	12940.693208391194	14875.608332672855	14538.146915396437	13020.904036174785	14045.600956673774	13703.56280388952	13777.747573385617	0.9962148446340269	1.0709294728554763	1.1204129450148614	0.9392459209652414	1.0796836168930812	1.0551903958147468	0.9450676873574878	1.0194410139873347	0.9946156097648792	1.0	13.75005243084882	-8.732891435093588	24.987993746308938	0.99140112232218	1.0452410863826456	0.22220629417528326	0.049246146169841375	327.26553760434626	286455.34348523366	0.018669134159340593	0.014458218786079282	1.8497309568126644e-09	8.732891435093588	0.05383996406046554	
GVHIHQAGGS(ph)PPASSTSSSSLTNDVAKQPVSR	ddPTM_K562_Methotrexat_30min_R1	1	GVHIHQAGGSPPASSTSSSSLTNDVAKQPVSR	32	1	Q8N122;Q8N122-3;I3L436	Q8N122	RPTOR	Regulatory-associated protein of mTOR	1	GVHIHQAGGS(0.997)PPAS(0.002)S(0.001)TSSSSLTNDVAKQPVSR	100.12	6.768799999999999e-10	29299000.0	1511.2	1199.2	2270.6	2552.8	1585.4	1568.1	1254.9	1841.9	1567.0	2205.9	True	False	1444.7694574597876	1397.3474170852421	1794.032089584938	2328.9999874776895	1793.907888778813	1871.1131320304955	1536.3432693026937	1777.1193330011422	1494.1505120267525	1806.390134391962	0.7998103122646331	0.7735579321881066	0.9931587066538182	1.2893117290311376	0.9930899502961742	1.0358300216582612	0.8505046833749637	0.9837959691909675	0.8271471835344636	1.0	10.818893796621545	-6.769273883623149	11.7269474260448	1.0025722996545838	0.7866174794247035	0.3370751514428174	0.11751848426637318	0.314183432289779	462.44163679155565	0.032624217132022966	0.07252526050352462	1.7010853969703194e-07	6.769273883623149	-0.21595482022988033	
GVLDLDRPGEPAGEES(ph)PGPLQER	ddPTM_K562_Methotrexat_30min_R1	2	GVLDLDRPGEPAGEESPGPLQER	23	1	A0A669KBI7;Q9UMN6	A0A669KBI7	KMT2B	Histone-lysine N-methyltransferase 2B	1	GVLDLDRPGEPAGEES(1)PGPLQER;GVLDLDRPGEPAGEES(1)PGPLQER	99.42299999999999	1.1719e-05	59033000.0	2693.4	2226.46	3245.7	2474.1000000000004	2360.6	2123.0299999999997	2245.95	2672.8	3086.6000000000004	2806.1	True	False	2575.0013609860985	2594.3446716507738	2564.471925114872	2257.1994942880556	2671.06027642946	2533.2755007299957	2749.661459630555	2578.7961090425383	2943.104639707577	2297.8880983350496	1.1205947595323869	1.1290126240396665	1.1160125364559648	0.9822930437402608	1.1623978897687814	1.1024364078326954	1.1966037256656845	1.1222461663433578	1.2807867545160374	1.0	11.166092828552163	-8.278889178379	2.073493904385461	1.1567592530291153	1.094308946459643	0.06725994355096998	0.07921611130902793	0.7555362793604938	6.380447348870052	0.030568512695792305	0.02776402495006456	5.2615151061168885e-09	8.278889178379	-0.06245030656947237	
GVNTFS(ph)PEGR	ddPTM_K562_Methotrexat_30min_R1	4	GVNTFSPEGR	10	0	P28066	P28066	PSMA5	Proteasome subunit alpha type-5	1	GVNT(0.004)FS(0.996)PEGR;GVNT(0.001)FS(0.999)PEGR;GVNT(0.011)FS(0.989)PEGR;GVNT(0.001)FS(0.999)PEGR	126.83	0.002176	389246000.0	10840.5	10315.1	11862.7	12504.1	10203.7	9968.7	10437.099999999999	11087.3	11529.7	12260.400000000001	True	False	10363.964600048188	12019.494948278829	9372.881383387312	11407.884966867663	11545.665399730266	11895.010190212613	12777.88535822706	10697.353374658542	10993.686763570426	10039.922754294947	1.0322753325581733	1.1971700622036208	0.9335611052762052	1.1362522646887419	1.1499755209561928	1.1847710865229601	1.2727075367946281	1.0654816412887593	1.094997146155081	1.0	13.293460548995075	-7.477088837995219	24.99940931522121	1.1414995488507003	1.0630002310453401	0.11249577492655105	0.09100723734456058	878.1914566195411	479456.06708390324	0.025366669418796242	0.03762299763188226	3.3335821501742336e-08	7.477088837995219	-0.07849931780536012	
GVPAGNS(ph)DTEGGQPGR	ddPTM_K562_Methotrexat_30min_R1	2	GVPAGNSDTEGGQPGR	16	0	S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5;G3V3B0;Q9UKV3-3;Q9UKV3-2;G3V3T3	S4R3H4	ACIN1	Apoptotic chromatin condensation inducer in the nucleus	1	GVPAGNS(0.613)DT(0.387)EGGQPGR;GVPAGNS(0.602)DT(0.398)EGGQPGR	202.84	9.4338e-16	38679000.0	612.77	695.74	830.97	869.5799999999999	705.99	678.49	751.66	759.39	670.76	905.72	True	False	585.833364510081	810.6992094420325	656.5607528769469	793.3452715100476	798.8400595426731	809.5985899823808	920.2388889983769	732.6818232736503	639.5765140057847	741.685331393757	0.7898678047322268	1.093050078149161	0.8852281757320911	1.0696520989827485	1.0770606155059212	1.0915661342000695	1.2407403113515625	0.9878607439853401	0.8623286546653257	1.0	9.534663426317122	-6.253688314791523	24.229565313257094	1.0398302671389608	0.789867615595058	0.331273322217311	0.1038485210248877	758.4949269105192	2370942.294599182	0.02691057311319128	0.27519726286116797	5.575857744839974e-07	6.253688314791523	-0.24996265154390274	
GVPAGNS(ph)DTEGGQPGRK	ddPTM_K562_Methotrexat_30min_R1	2	GVPAGNSDTEGGQPGRK	17	1	S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5;G3V3B0;Q9UKV3-3;Q9UKV3-2;G3V3T3	S4R3H4	ACIN1	Apoptotic chromatin condensation inducer in the nucleus	1	GVPAGNS(1)DTEGGQPGRK;GVPAGNS(1)DTEGGQPGRK	136.85	1.1783e-06	90352000.0	4740.299999999999	3573.2	6511.6	5602.2	4187.6	4229.799999999999	3477.3999999999996	4531.9	4710.4	5260.0	True	False	4531.922087874953	4163.610565984811	5144.904146279085	5111.063823976617	4738.342799955949	5047.148986584143	4257.295469498116	4372.510508294628	4491.414532131982	4307.363029557874	1.0521337664775676	0.9666263413168082	1.1944440510293324	1.1865876613843802	1.1000565235483095	1.1717491541692049	0.9883762850458191	1.0151246779734378	1.0427295078940675	1.0	12.072589205379419	-8.774414298702919	24.99282643970426	1.0128179909674955	1.1119321434436695	0.3628317068042064	0.06515529387683815	295.1208147685801	568468.4439646176	0.029646466977932148	0.020129630818410717	1.681069626062754e-09	8.774414298702919	0.09911415247617406	
GVPAGNSDT(ph)EGGQPGR	ddPTM_K562_Methotrexat_30min_R1	1	GVPAGNSDTEGGQPGR	16	0	S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5;G3V3B0;Q9UKV3-3;Q9UKV3-2;G3V3T3	S4R3H4	ACIN1	Apoptotic chromatin condensation inducer in the nucleus	1	GVPAGNS(0.193)DT(0.807)EGGQPGR	171.87	5.6958e-07	31456000.0	571.33	513.39	564.7	394.31	524.01	477.72	385.27	521.22	585.34	658.7	True	False	546.2150172912259	598.2189713620685	446.17718708209907	359.7414545057693	592.9264998101337	570.0326289354052	471.6766048005807	502.8883971696919	558.1276711612888	539.4030470664967	1.0126287203266195	1.109038917402187	0.8271684587408256	0.6669251433824789	1.0992271976117307	1.0567842210671319	0.8744418619170929	0.9323054437764359	1.0347136045979433	1.0	9.075219861098534														
GVQVPAS(ph)PDTVPQPSLR	ddPTM_K562_Methotrexat_30min_R1	2	GVQVPASPDTVPQPSLR	17	0	Q92613;F2Z2B6;F2Z3N8	Q92613	JADE3	Protein Jade-3	1	GVQVPAS(0.986)PDT(0.01)VPQPS(0.003)LR;GVQVPAS(0.847)PDT(0.152)VPQPS(0.002)LR	152.25	5.2705e-12	34113000.0	4829.299999999999	4721.4	4311.9	4356.6	4368.3	4143.799999999999	4131.3	5356.3	5107.6	5261.7	True	False	4617.0097544405435	5501.531099921834	3406.8911155999717	3974.6636420578593	4942.808017252737	4944.530703722959	5057.849189951564	5167.91589302026	4870.148790828237	4308.75514308454	1.0715414548099225	1.27682611734196	0.7906903508007317	0.9224621752844577	1.147154538402081	1.147554349116084	1.1738539373882277	1.1993988336317174	1.1302913786235271	1.0	12.073055400308158	-7.794957608649709	24.458964478205584	1.1457784322581956	1.0180054930301392	0.17137642757961935	0.12482569933792492	260.2407849460572	189901.5503763068	0.04070419164886612	0.04615729611432678	1.6034018906154565e-08	7.794957608649709	-0.12777293922805644	
GVQVPVS(ph)PGTIPQPVAR	ddPTM_K562_Methotrexat_30min_R1	2	GVQVPVSPGTIPQPVAR	17	0	D6RCS1;D6RC05;D6RBB3;D6RFK0;D6RGE7;Q6IE81-3;Q6IE81-2;Q6IE81	D6RCS1	JADE1	Protein Jade-1	1	GVQVPVS(0.757)PGT(0.243)IPQPVAR;GVQVPVS(0.809)PGT(0.191)IPQPVAR	198.51	4.107e-12	82878000.0	6189.599999999999	6019.2	6169.9	5946.4	6756.9	6370.7	6554.799999999999	7102.0	6558.599999999999	7129.6	True	False	5917.512595217777	7013.77049109363	4874.922306672293	5425.088344381589	7645.55078446421	7601.74761190401	8024.880756733841	6852.218634548076	6253.69211753584	5838.360352763469	1.0135572725340332	1.2013253837224702	0.8349814009621466	0.929214371259858	1.3095373225541558	1.3020346728522638	1.3745093265672488	1.1736546257040674	1.0711384258040502	1.0	12.511347543652425	-7.759389001692342	24.99993822341618	1.2271410938937084	0.9981101326366898	0.3572547151312482	0.13630811802406523	58.94932031955354	718750.436734841	0.042597976718613005	0.05227458242606682	1.740247418944889e-08	7.759389001692342	-0.2290309612570186	
GVS(ph)QEKEAQISSAIVSSVQSK	ddPTM_K562_Methotrexat_30min_R1	2	GVSQEKEAQISSAIVSSVQSK	21	1	Q12872;Q12872-2	Q12872	SFSWAP	Splicing factor, suppressor of white-apricot homolog	1	GVS(0.993)QEKEAQIS(0.005)S(0.002)AIVSSVQSK;GVS(1)QEKEAQISSAIVSSVQSK	101.45	0.00050234	0.0	2176.5	1356.1100000000001	3493.9	2331.7	1813.8400000000001	1535.8600000000001	1441.42	1681.6399999999999	1850.13	3475.2	True	False	2080.8236660675143	1580.184127571271	2760.578136968562	2127.2834811977928	2052.3917528589395	1832.643208316025	1764.6951272916476	1622.4957680373748	1764.1178601251154	2845.807604623487	0.7311891579342437	0.5552673782317538	0.9700508679798115	0.7475148628254656	0.7211983514010183	0.6439800095194742	0.6201034547889349	0.5701354390231304	0.6199006065128975	1.0	11.474622414116755	-12.030225219578904	4.763685497959645	1.0000065439686996	0.6872432573859383	0.40709762686456585	0.11346513550962817	192907681.31456023	17.51879310044775	15885.847291219836	0.028976199120643694	9.327704524898475e-13	12.030225219578904	-0.3127632865827613	
GVSNDTSS(ph)LETERGFEELPLCSCR	ddPTM_K562_Methotrexat_30min_R1	2	GVSNDTSSLETERGFEELPLCSCR	24	1	A0A0G2JRR0;Q96KQ7-2;A0A0G2JIS2;A2ABF8;A0A0G2JIR1	A0A0G2JRR0	EHMT2		1	GVS(0.001)NDT(0.03)S(0.126)S(0.717)LET(0.126)ERGFEELPLCS(0.001)CR;GVSNDT(0.056)S(0.148)S(0.649)LET(0.148)ERGFEELPLCSCR	85.884	0.00030289	48483000.0	904.3499999999999	644.54	755.61	963.69	612.87	661.29	640.17	698.5699999999999	724.38	878.04	True	False	864.5958568381147	751.0392796932305	597.0177870216132	879.2047939252482	693.4731473419146	789.0749334101444	783.744418447291	674.000897146755	690.703731909342	719.0184476184406	1.2024668625705792	1.0445340897453332	0.8303233234127407	1.2227847516811046	0.9644719821012407	1.0974335026086568	1.090019902887385	0.9373902705545395	0.9606203209349027	1.0	9.489884975663527	-9.264099269043209	24.94844200294132	0.9617539684530096	1.058294265658426	0.1503972499766959	0.10649018947574407	467.33429827296055	4383299.65633964	0.05414357711285291	0.02785393709005204	5.443782071435086e-10	9.264099269043209	0.09654029720541635	
GVTEAIQNFS(ph)FR	ddPTM_K562_Methotrexat_30min_R1	1	GVTEAIQNFSFR	12	0	E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3;A0A0U1RQI6	E3W994	CLASP2	CLIP-associating protein 2	1	GVTEAIQNFS(1)FR	94.023	0.013553999999999998	4703000.0	1263.1	1386.4	1078.1	1175.2	1446.3	1379.2	1199.5	1519.0	1609.4	1865.1	True	False	1207.5756363932353	1615.4790352293012	851.821543108219	1072.1720406157078	1636.5138006438744	1645.710880490058	1468.5184090593525	1465.5759090226047	1534.5793452813377	1527.3123168114819	0.7906540287151288	1.057726712112086	0.5577258388687246	0.7019992105177578	1.071499118176673	1.0775208596011014	0.9615049868288423	0.9595783998404713	1.0047580500660316	1.0	10.576779390570994	-7.764330374780799	24.999984397007665	1.0111594381082885	0.7814121273577777	0.47643568275633263	0.1208774556190813	73.37024650821654	634472.4461971453	0.0389487801648949	0.046123291823229086	1.7205592200198088e-08	7.764330374780799	-0.2297473107505108	
GVTIPYRPKPSS(ph)SPVIFAGGQDR	ddPTM_K562_Methotrexat_30min_R1	1	GVTIPYRPKPSSSPVIFAGGQDR	23	2	Q15366;Q15366-6;Q15366-3;Q15366-2;H3BSS4	Q15366	PCBP2	Poly(rC)-binding protein 2	1	GVTIPYRPKPS(0.215)S(0.393)S(0.393)PVIFAGGQDR	88.57	0.00095771	178660000.0	2333.8	2039.1	2767.0	1812.7	1694.6	1977.9	1513.7	2396.4	2442.0	2808.9	True	False	2231.208946413215	2376.0266162262465	2186.2445132923126	1653.7834053983108	1917.4696028286717	2360.10118222251	1853.185757226463	2312.1172537075495	2328.471953011698	2300.1809912024933	0.9700145140521221	1.0329737639402465	0.9504662988060706	0.7189796853915146	0.8336168371803877	1.0260502070268356	0.805669538316483	1.005189270996808	1.0122994503116969	1.0	11.167531669673915	-9.452828932080344	24.716780960970656	1.0070151081757475	0.90665195034262	0.19575637523083023	0.09326159244291132	248.30717119090025	87613.90622404103	0.054772620048144885	0.026311888155070365	3.525096967193016e-10	9.452828932080344	-0.10036315783312744	
GVTIPYRPKPSSS(ph)PVIFAGGQDR	ddPTM_K562_Methotrexat_30min_R1	1	GVTIPYRPKPSSSPVIFAGGQDR	23	2	Q15366;Q15366-6;Q15366-3;Q15366-2;H3BSS4	Q15366	PCBP2	Poly(rC)-binding protein 2	1	GVTIPYRPKPS(0.031)S(0.27)S(0.699)PVIFAGGQDR	65.836	0.0037302	280990000.0	2544.9	2337.1	3344.6	2553.3	2133.6	1808.8	1801.9	2735.0	2784.8	3782.0	True	False	2433.029243177219	2723.266051092326	2642.6141666633403	2329.4561532539897	2414.2057975895514	2158.3250004570887	2206.0219435465165	2638.808499787243	2655.335255834141	3097.0431516707017	0.7855974631366438	0.879311626518106	0.8532700505763959	0.7521548907051434	0.7795195867023056	0.6968985883495937	0.7122993886463858	0.8520412440374736	0.8573775455475069	1.0	11.596675769149517	-10.064005422885947	1.6375331931829264	0.9976167884063502	0.7842039567291755	0.5832715437646179	0.05535435694936739	0.3606797486637214	2.1389666229438937	0.059511840631234866	0.017203346935248744	8.629677721176902e-11	10.064005422885947	-0.21341283167717462	
GVVDSDDLPLNVSR	ddPTM_K562_Methotrexat_30min_R1	3	GVVDSDDLPLNVSR	14	0	P14625	P14625	HSP90B1	Endoplasmin	0	;;	228.12	1.6777e-35	47346300.0	3615.35	2396.49	2496.62	3399.7700000000004	3380.55	2397.4700000000003	2813.59	3761.4100000000003	4036.25	4829.0	False	True	3456.4235428978573	2792.4692391349317	1972.6135803309896	3101.7174425834464	3825.151579040757	2860.747146641896	3444.6091792791203	3629.119078312518	3848.6056184862687	3954.421306033265	0.8740655775914388	0.7061638158975267	0.49883748535376615	0.7843669661224899	0.9673100772557337	0.7234300357114835	0.8710779435725972	0.917737084001537	0.9732411699821784	1.0	11.94925086937241	-8.785001242390083	0.5786661679782201	1.002352301017338	0.7048137446160471	0.4192799962478416	0.11251951073758272	0.8650710933332937	0.5975361345708117	0.11072901541517799	0.08388761157411101	1.6405850799565137e-09	8.785001242390083	-0.297538556401291	
GVVDSEDLPLNISR	ddPTM_K562_Methotrexat_30min_R1	1	GVVDSEDLPLNISR	14	0	P08238;P07900;P07900-2	P08238;P07900	HSP90AB1;HSP90AA1	Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha	0		123.26	0.0084947	18331000.0	557.59	498.44	371.45	377.87	365.61	428.77	603.74	792.53	506.65	688.45	False	True	533.0790112394145	580.798737968619	293.487721164593	344.7427237810225	413.69412338616246	511.623734213836	739.144063597744	764.6562706897201	483.0959520857397	563.7650337831028	0.9455694824885253	1.0302141906020896	0.5205851792459808	0.6115007194888488	0.7338059272851656	0.9075123563102583	1.311085326874165	1.3563385894271445	0.8569101010822908	1.0	9.138950190648528	-8.567037788305772	5.009267705912493	1.1591297832472074	0.764785965329675	0.44051547539078795	0.19150629216707105	0.18208044042635949	10.49520383562246	0.07861255666837069	0.061155408144205045	2.709955826236061e-09	8.567037788305772	-0.39434381791753237	
GVVIPTWNIS(ph)PIKK	ddPTM_K562_Methotrexat_30min_R1	1	GVVIPTWNISPIKK	14	1	Q3T8J9-3;A0A087WUE6;Q3T8J9-2;Q3T8J9;A4PB68	Q3T8J9-3	GON4L	GON-4-like protein	1	GVVIPT(0.021)WNIS(0.979)PIKK	85.57600000000001	0.016628	4276400.0	2295.1	1604.5	2903.8	2639.1	1804.0	1475.7	1727.2	2175.1	1883.7	2946.6	True	False	2194.210152075146	1869.616353163166	2294.332062774923	2407.734200467082	2041.2576203841156	1760.8581397470853	2114.5685670090147	2098.6005001415847	1796.1271981523892	2412.942186862212	0.9093504867302665	0.7748284908534893	0.9508441914882637	0.9978416447673357	0.8459620920460449	0.7297556275216456	0.8763444804116082	0.8697268055438174	0.7443722472638565	1.0	11.236577634228858	-7.974712499797976	24.98531653316676	0.8323547661745482	0.9042544473912549	0.10460802383318335	0.08798318657939644	477.1566788486311	471452.6148905476	0.02721907833230145	0.030862701339517976	1.0599551766008396e-08	7.974712499797976	0.07189968121670676	
GVYWHS(ph)ELQKGLES(ph)EPTSRR	ddPTM_K562_Methotrexat_30min_R1	1	GVYWHSELQKGLESEPTSRR	20	2	Q9NX65-3;Q9NX65-2;Q9NX65	Q9NX65-3	ZSCAN32	Zinc finger and SCAN domain-containing protein 32	2	GVY(0.018)WHS(0.982)ELQKGLES(0.944)EPT(0.013)S(0.043)RR	59.358999999999995	0.030751	22413000.0	1534.5	1254.7	1988.8	1648.3	1336.1	1739.6	1494.2	1717.9	1935.5	1716.7	True	False	1467.0452173584204	1462.0178487465414	1571.378058560083	1503.7960981508431	1511.8205690660848	2075.7530798292523	1829.3123858411705	1657.4804832850118	1845.5190274586985	1405.7889948368831	1.043574265232205	1.039998075184948	1.1177908379787918	1.0697167951050377	1.075424956816869	1.4765751385542085	1.3012709535782285	1.1790393077286345	1.3127994558478089	1.0	10.45716435066051	-8.061337682266956	24.999291717316584	1.268964922144798	1.0697603584645388	0.3922007408284127	0.1141815778896753	224.12034466939522	91343.5477452571	0.036305296605186964	0.036305340275933025	8.6828503852874e-09	8.061337682266956	-0.1992045636802593	
GWAFGSNS(ph)LPIAGSVGMGVAR	ddPTM_K562_Methotrexat_30min_R1	2	GWAFGSNSLPIAGSVGMGVAR	21	0	M0QZ22;Q5PRF9;A0A087WZT0	M0QZ22	SAMD4B	Protein Smaug homolog 2	1	GWAFGS(0.058)NS(0.862)LPIAGS(0.081)VGMGVAR;GWAFGSNS(0.894)LPIAGS(0.106)VGMGVAR	174.91	1.8108e-17	62972000.0	4400.2	3785.8999999999996	3351.6000000000004	3843.6000000000004	3698.2	3588.8999999999996	3998.3	5033.5	5118.4	5977.8	True	False	4206.772476650711	4411.455625702982	2648.1449623240005	3506.637555573976	4184.578121787439	4282.404132098874	4895.020554349322	4856.46895198504	4880.446701185536	4895.162493933664	0.8593734083115644	0.90118675961623	0.5409718197517891	0.7163475287939023	0.8548394720243061	0.8748236932698041	0.9999710041118107	0.992095555153363	0.9969938091398671	1.0	12.257141035257414	-8.383033139076142	1.6485543173524906	0.9986179968759133	0.7552024983464788	0.5687169453787806	0.09238567855085342	0.2999819938946335	1.62326146524788	0.04542186494470938	0.03771651594329591	4.139680855550907e-09	8.383033139076142	-0.24341549852943456	
GWVHDSIDYR	ddPTM_K562_Methotrexat_30min_R1	1	GWVHDSIDYR	10	0	Q9UIG0-2;Q9UIG0	Q9UIG0-2	BAZ1B	Tyrosine-protein kinase BAZ1B	0		85.53299999999999	0.030227999999999998	3705300.0	2326.0	2159.3	2011.9	2369.5	2128.1	2259.0	2212.3	3208.7	3181.1	3157.1	False	True	2223.75182507376	2516.087623175585	1589.6296842402617	2161.7696138860783	2407.9824511859424	2695.519778876915	2708.4645905477314	3095.848202291525	3033.2113553339527	2585.318597075508	0.8601461450783089	0.9732214923227503	0.6148680035174149	0.8361714553600686	0.9314064633696726	1.0426257645483483	1.0476328115271847	1.1974726077449502	1.173244705223216	1.0	11.336126364079805	-8.250633181263987	1.5435643506011498	1.124124034067668	0.8177150140491055	0.6349269741856229	0.0979488666222071	0.2530481133131657	1.2022797982684506	0.0446848506897398	0.04087859829092992	5.61522054926539e-09	8.250633181263987	-0.3064090200185624	
GY(ph)FRAEKDPPSMACT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	GYFRAEKDPPSMACTR	16	2	E7EU71;A0A0B4J1T8;Q9UF33	E7EU71	EPHA6	Receptor protein-tyrosine kinase;Ephrin type-A receptor 6	2	GY(1)FRAEKDPPS(0.005)MACT(0.995)R	54.812	0.032853	0.0	0.0	0.0	77.375	166.91	0.0	130.04	0.0	0.0	0.0	0.0	True	False	0.0	0.0	61.135044891938065	152.27725944449276	0.0	155.16838957288797	0.0	0.0	0.0	0.0											0.0														
GY(ph)LVS(ph)VDGY(ph)MNMQLANTEEYIDGALSGHLGEVLIR	ddPTM_K562_Methotrexat_30min_R1	1	GYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIR	35	0	P62306	P62306	SNRPF	Small nuclear ribonucleoprotein F	3	GY(0.99)LVS(0.679)VDGY(0.679)MNMQLANT(0.643)EEY(0.007)IDGALS(0.003)GHLGEVLIR	41.673	0.01005	30933000.0	1287.9	1131.1	1558.4	1352.3	1382.0	1506.7	1240.2	1320.3	1181.6	1852.0	True	False	1231.285458087917	1317.9950495873213	1231.3131367960748	1233.7459585811962	1563.757223598032	1797.848451010999	1518.3464201045515	1273.8643006468358	1126.6676739060701	1516.5848537530767	0.8118803606938759	0.8690546040504709	0.8118986113760512	0.8135027562276241	1.0311043392845565	1.1854585297762155	1.0011615349758476	0.8399558372842885	0.7428978807996911	1.0	10.566610504459991	-7.750198036637677	24.971573411565817	0.971415514131231	0.8285686954749807	0.27652730645997337	0.11090695416788048	331.5429372742436	736487.5729210657	0.03719550077183656	0.04756967576544306	1.777468706220994e-08	7.750198036637677	-0.14284681865625026	
GY(ph)TPLMET(ph)HLS(ph)S(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	GYTPLMETHLSSK	13	0	P40126;P40126-2	P40126	DCT	L-dopachrome tautomerase	4	GY(0.963)T(0.049)PLMET(0.999)HLS(0.995)S(0.994)K	40.994	0.033922	26954000.0	0.0	0.0	221.44	136.15	148.41	0.0	0.0	0.0	134.64	188.13	True	False	0.0	0.0	174.96277015664967	124.2139408865118	167.92851631995939	0.0	0.0	0.0	128.38061578767196	154.05783398302725	0.0	0.0	1.1356953790219169	0.8062812365659809	1.0900355533913342	0.0	0.0	0.0	0.833327410028469	1.0	7.267328236391516	-12.108724927876098	9.70961538147523	1.0000000012640242	0.43023620312452676	0.11930523304376295	0.4650178676271087	1.4362412260344039e-08	1.4925969265200886e-09	0.4862890030338334	0.11794240729910613	7.785294975686131e-13	12.108724927876098	-0.5697637981394974	
GYAFIEYEHER	ddPTM_K562_Methotrexat_30min_R1	2	GYAFIEYEHER	11	0	P08621-2;P08621;M0QYR1;P08621-3	P08621-2	SNRNP70	U1 small nuclear ribonucleoprotein 70 kDa	0	;	196.44	5.1253e-07	79706000.0	5504.5	6403.9	5838.6	6038.3	6417.7	5571.5	5811.0	6835.5	6843.700000000001	6733.2	False	True	5262.528770902196	7462.035627311688	4613.157649189913	5508.931614065549	7261.74003899066	6648.113522803335	7114.264672816926	6595.09159060172	6525.537880764194	5513.752233958005	0.9544369328914386	1.3533498261591494	0.836663936543698	0.9991257097366896	1.3170232775907442	1.2057330907723864	1.290276452576471	1.1961167841354896	1.1835021966665134	1.0	12.42881872450363	-7.74895284320516	24.99913511457646	1.2135040940089268	1.044338762570093	0.22635402706379537	0.14567097103659618	335.94279481963366	672583.7586515509	0.04219185686759668	0.054083892640400984	1.7825723131567766e-08	7.74895284320516	-0.16916533143883372	
GYDDRDYYSR	ddPTM_K562_Methotrexat_30min_R1	3	GYDDRDYYSR	10	1	P62995;H7C2L4;P62995-3;H7BXF3	P62995	TRA2B	Transformer-2 protein homolog beta	0	;;	117.53	0.008523600000000001	485953000.0	17302.9	16449.1	19304.9	19373.0	16763.7	16712.9	16203.1	18616.9	18171.4	18582.7	False	True	16542.285233907456	19167.034188106096	15253.065307067853	17674.599168522902	18968.420382945253	19942.431391054444	19837.057635539477	17962.133074840636	17326.615580244368	15217.192959955351	1.0870786272763404	1.2595643781704622	1.0023573563933177	1.1614887985605697	1.246512443711623	1.3105197156619979	1.3035950643289786	1.1803841301157647	1.13862100755639	1.0	13.893414636141019	-6.226053939774409	21.78277268555045	1.18793705606757	1.0870774404609034	0.05657203203154937	0.10483970106467948	8517.588239962619	5242783.320175594	0.026795639926466403	3.7926786877502243	5.942183515659893e-07	6.226053939774409	-0.10085961560666656	
GYDRYEDYDYR	ddPTM_K562_Methotrexat_30min_R1	4	GYDRYEDYDYR	11	1	Q13595;Q13595-4;Q13595-3	Q13595	TRA2A	Transformer-2 protein homolog alpha	0	;;;	125.23	0.005429	526320000.0	13742.900000000001	13441.300000000001	14264.0	15005.199999999999	13489.0	14272.8	14933.7	15169.5	14639.9	15668.1	False	True	13138.77857128382	15662.246361964526	11270.18132909343	13689.717413075914	15263.039934235781	17030.816600245435	18282.962372129758	14635.980086845544	13959.294244429131	12830.4552630068	1.024030582076537	1.2207085439222443	0.8783929407078793	1.0669705113696604	1.1895945717719536	1.3273743020911548	1.4249659889188664	1.1407218050200054	1.0879812101973527	1.0	13.647284742029216	-7.783146451952931	4.347983962017483	1.2224997255297532	1.0460347717891219	0.20854911557442624	0.13628011268370624	0.29257645833530677	12.745871460322931	0.04382332675220462	0.052705895987195404	1.647606695062992e-08	7.783146451952931	-0.17646495374063131	
GYDS(ph)EDDTWEPEQHLVNCEEYIHDFNRR	ddPTM_K562_Methotrexat_30min_R1	3	GYDSEDDTWEPEQHLVNCEEYIHDFNRR	28	1	Q9Y232-2;Q9Y232	Q9Y232-2	CDYL	Chromodomain Y-like protein	1	GYDS(0.993)EDDT(0.007)WEPEQHLVNCEEYIHDFNRR;GYDS(1)EDDTWEPEQHLVNCEEYIHDFNRR;GYDS(0.99)EDDT(0.009)WEPEQHLVNCEEYIHDFNRR	92.07	3.8534e-05	56216500.0	971.99	613.58	1105.298	1000.73	1119.75	1021.44	838.69	1181.41	1107.03	1450.65	True	False	929.2624834279635	714.963665923251	873.3110545908797	912.9975546335583	1267.0167518986223	1218.8188237875331	1026.7875819041165	1139.859140670438	1055.564416929787	1187.923227914094	0.7822580294685206	0.6018601616020883	0.7351578233926361	0.7685661271534482	1.0665813430750155	1.026008074551829	0.8643551685634433	0.9595393994205728	0.8885796591277036	1.0	10.21422588655283	-7.609919760157638	5.310498910876656	0.9625417207446976	0.7042446144627313	0.7486440661534891	0.07025059669514781	0.10438286043315262	4.862935236347833	0.021687061763802643	0.028246805851421232	2.455162487308307e-08	7.609919760157638	-0.2582971062819662	
GYEEWLLNEIR	ddPTM_K562_Methotrexat_30min_R1	1	GYEEWLLNEIR	11	0	A0A494C060;F6THM6;H9KV75;A0A494C1A0;O43707-2;P12814-2;P12814;P35609-2;P35609;O43707;P12814-3;P12814-4	A0A494C060	ACTN2;ACTN1;ACTN4	Alpha-actinin-4;Alpha-actinin-1;Alpha-actinin-2	0		123.96	0.018677000000000003	1887700.0	928.83	583.67	728.1	602.73	865.71	657.57	778.2	938.27	937.65	964.41	False	True	887.9997453496389	680.1115468063228	575.2817600752195	549.8895966986948	979.5660391035112	784.636096058474	952.7311595914869	905.2705122835013	894.058856159467	789.7460036760284	1.124411825088407	0.861177573093893	0.7284389631570874	0.6962866467688666	1.2403558036937548	0.9935296822095087	1.2063766770035074	1.1462805865047005	1.1320840523382125	1.0	9.625244921346287	-7.765514982098547	24.999996924925764	1.1251033719201602	0.8443258220471785	0.5051300184364522	0.1293931371361733	85.39188284820052	523799.01676030364	0.04053758666186246	0.04765150908965186	1.7158725156904386e-08	7.765514982098547	-0.28077754987298165	
GYFEYIEENKYSR	ddPTM_K562_Methotrexat_30min_R1	2	GYFEYIEENKYSR	13	1	A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;Q5RI18;A0A1W2PRI6	A0A1W2PPS1	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	0	;	155.99	3.6875e-07	46356000.0	3165.1	2286.02	3367.2	2779.7	2606.2	2473.5	2671.3	3348.6	3858.0	4245.9	False	True	3025.965993783732	2663.745949303872	2660.4707355106157	2536.008016762666	2948.9609812888507	2951.4688681062653	3270.407024693831	3230.827839995451	3678.642422079905	3476.9263663877914	0.8702991305874084	0.7661208977719193	0.7651789123951456	0.7293821466220312	0.8481516921948944	0.8488729863936036	0.9406029003977685	0.9292195173382363	1.0580156248467458	1.0	11.76359679896029	-8.841010921371279	1.0257857993772914	1.0160881114432205	0.7825982376138776	0.8064543629603583	0.044628309695108864	0.2261087338030487	0.4610996174025065	0.033703378931459034	0.01789165957859005	1.4420790865484426e-09	8.841010921371279	-0.23348987382934294	
GYIFLEYAS(ph)PAHAVDAVK	ddPTM_K562_Methotrexat_30min_R1	2	GYIFLEYASPAHAVDAVK	18	0	P55884-2;P55884;C9JZG1	P55884-2	EIF3B	Eukaryotic translation initiation factor 3 subunit B	1	GYIFLEYAS(1)PAHAVDAVK;GYIFLEYAS(1)PAHAVDAVK	139.78	6.282300000000001e-09	17833500.0	4120.799999999999	2801.1	4454.4	4008.1	2703.4	2842.9	3366.3999999999996	5228.3	4603.1	6095.299999999999	True	False	3939.6545661065975	3263.934164440852	3519.4823129776905	3656.7160959767025	3058.9444850035607	3392.250190070465	4121.400893920304	5044.417725571349	4389.102885711774	4991.382105335382	0.7892913191108785	0.6539139051189792	0.7051117784021483	0.7326059233309287	0.6128451840490828	0.6796214191745459	0.8257033436720586	1.0106254378279869	0.8793361824614028	1.0	12.285223635380184	-8.985494291189834	3.3214224397502634	0.9571678311214226	0.692530910544239	0.8244324277285553	0.05536718371479605	0.09419513662296881	2.1689136356630354	0.026231846567566813	0.015648540174323825	1.0339646923808291e-09	8.985494291189834	-0.2646369205771836	
GYNHGQGSYSYSNSY(ph)NSPGGGGGSDYNYESK	ddPTM_K562_Methotrexat_30min_R1	1	GYNHGQGSYSYSNSYNSPGGGGGSDYNYESK	31	0	Q12906;Q12906-7	Q12906	ILF3	Interleukin enhancer-binding factor 3	1	GYNHGQGSY(0.001)S(0.002)Y(0.007)S(0.032)NS(0.08)Y(0.861)NS(0.017)PGGGGGSDYNYESK	149.87	5.208e-35	11271000.0	1024.4	840.6	1104.2	869.92	763.98	748.26	628.24	987.92	874.18	1071.0	True	False	979.3686025819262	979.4948622430402	872.4435097858224	793.655464237931	864.4567609872825	892.8506550431348	769.1388122613151	953.1742936416136	833.5395626059643	877.0315217978115	1.116685749874002	1.1168297123861535	0.9947687034069377	0.9049337960065913	0.9856621335744555	1.0180371319070676	0.8769796673723551	1.0868187402064164	0.9504100387376114	1.0	9.776484885950012	-6.790818920542346	4.8242640118184505	0.974830717583889	1.1187910875596594	0.5091264850482351	0.05504685773241138	0.13468159178756864	7.547366114619647	0.014001244146045273	0.033021491257260255	1.618754838175608e-07	6.790818920542346	0.14396036997577044	
GYNHGQGSYSYSNSYNS(ph)PGGGGGSDYNYESK	ddPTM_K562_Methotrexat_30min_R1	1	GYNHGQGSYSYSNSYNSPGGGGGSDYNYESK	31	0	Q12906;Q12906-7	Q12906	ILF3	Interleukin enhancer-binding factor 3	1	GYNHGQGS(0.001)Y(0.004)S(0.004)Y(0.035)S(0.165)NS(0.165)Y(0.14)NS(0.486)PGGGGGSDYNYESK	88.633	8.2765e-07	51237000.0	1481.4	949.13	1773.3	1553.6	1200.6	944.61	925.55	1483.3	1168.4	1626.2	True	False	1416.279429778276	1105.9576000484615	1401.1085635783368	1417.3983001196086	1358.4999440316913	1127.1425136453836	1133.1281479823951	1431.1314982575568	1114.081339024925	1331.6794217998133	1.0635288092566022	0.8304983781710161	1.0521365282379205	1.0643690042187053	1.02014037447213	0.8464067967063795	0.8509015979618662	1.0746816950308733	0.8365987495092501	1.0	10.379031105626755	-8.229948160088886	24.912936336351002	0.921959339885907	1.002167963430431	0.16872779961208784	0.09347872627050166	1304.9020296297372	1032318.962509531	0.030918388278392158	0.030915631173152578	5.889139473485905e-09	8.229948160088886	0.08020862354452407	
GYQSLSDS(ph)PPGSR	ddPTM_K562_Methotrexat_30min_R1	2	GYQSLSDSPPGSR	13	0	Q9NPR2	Q9NPR2	SEMA4B	Semaphorin-4B	1	GYQSLSDS(0.973)PPGS(0.026)R;GYQSLS(0.226)DS(0.774)PPGSR	212.43	1.1563e-17	58701000.0	4592.700000000001	4412.6	4414.7	4534.3	4714.7	4105.5	5040.4	5501.6	5441.2	5004.0	True	False	4390.810407143703	5141.707148624367	3488.1148004450934	4136.784958954904	5334.765688927383	4898.829770774315	6170.838006688416	5308.105609663434	5188.239799642605	4097.727110248598	1.0715233808913458	1.2547705130887628	0.8512315990299019	1.0095315885258977	1.3018840799781166	1.1954992704424174	1.5059172660021392	1.2953780148969962	1.2661262353626688	1.0	12.000608195365576	-7.764498059801128	24.99705321683398	1.2845604847760073	1.0476552212813717	0.32415714484996483	0.14905182067980316	87.09618663143428	711793.8737398166	0.045411977538736596	0.05371515267278509	1.7198950248056637e-08	7.764498059801128	-0.2369052634946356	
GYSFSLTTFS(ph)PSGK	ddPTM_K562_Methotrexat_30min_R1	1	GYSFSLTTFSPSGK	14	0	P25787;A0A024RA52;H3BT36	P25787	PSMA2	Proteasome subunit alpha type-2;Proteasome subunit alpha type	1	GYSFSLTT(0.009)FS(0.824)PS(0.167)GK	153.7	1.6554e-08	3686900.0	1222.3	752.7	931.16	1095.0	670.63	675.77	685.82	1191.3	1238.9	1389.2	True	False	1168.569155540695	877.0708812875763	735.7222410543072	999.0030500971751	758.8295997551002	806.3529884779336	839.6325929979873	1149.4013037647314	1181.3038094128553	1137.6024183767681	1.0272210542661406	0.7709819064371002	0.6467305529326326	0.8781653712750023	0.6670428855433214	0.7088179274693434	0.7380720886617396	1.0103717126452658	1.0384153464603603	1.0	10.151780721694484	-9.267160349854901	23.546356380089367	1.0182952149364501	0.7685705338450346	0.5232142873378154	0.10458136964655108	167.71942066833623	690287.7459432036	0.05553413081810056	0.027896258162474177	5.405547029289131e-10	9.267160349854901	-0.24972468109141555	
GYSFTTTAER	ddPTM_K562_Methotrexat_30min_R1	4	GYSFTTTAER	10	0	P60709;P63261;A0A2R8Y793;I3L3I0;I3L1U9;I3L4N8;A0A2R8YEA7	P60709	ACTB;ACTG1	Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed	0	;;;	213.85	1.8708e-16	276946000.0	5153.209999999999	4509.93	4543.5	5232.700000000001	4963.59	4264.51	4691.56	6114.7	5851.5	6168.7	False	True	4926.681058679431	5255.1192767972325	3589.881440601235	4773.95731529086	5616.389086453658	5088.566202841255	5743.761756737387	5899.642535155045	5579.4650421981805	5051.488654074844	0.9752929079045372	1.040311012587968	0.7106581220776205	0.9450594947768297	1.1118285066171791	1.007339925179581	1.137043384647437	1.1679017689955669	1.1045189694125985	1.0	12.302492891806661	-7.696765394114718	5.156067538729629	1.095002348150765	0.9081789886640459	0.44924945237971736	0.09252198437845614	0.18610441808847442	9.53012154595358	0.02863972061702554	0.03675599152205009	2.010178417770149e-08	7.696765394114718	-0.18682335948671902	
GYSSNYRRSPERPT(ph)GDLR	ddPTM_K562_Methotrexat_30min_R1	1	GYSSNYRRSPERPTGDLR	18	3	Q5T200-2;Q5T200;Q5T9K0	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	1	GYS(0.005)S(0.021)NY(0.004)RRS(0.199)PERPT(0.771)GDLR	76.34100000000001	0.029858	40027000.0	2508.3	2354.0	2699.5	2945.2	2521.0	2412.6	2264.0	2625.5	2597.9	2696.7	True	False	2398.0381353536177	2742.958488841444	2132.9118408502322	2686.9988887179898	2852.555687909289	2878.80080501038	2771.759631605147	2533.159676852434	2477.124196039757	2208.301498442724	1.0859197156931217	1.24211231608354	0.9658607949839929	1.2167717544967656	1.291741951867029	1.3036267045240364	1.2551545310093613	1.1471077108985333	1.1217327877495915	1.0	11.108721440751742														
GYT(ph)SDSEVYTDHGRPGK	ddPTM_K562_Methotrexat_30min_R1	2	GYTSDSEVYTDHGRPGK	17	1	A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538	A0A669KB10	GBF1	Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1	1	GYT(0.497)S(0.497)DS(0.006)EVYTDHGRPGK;GYT(0.849)S(0.15)DS(0.001)EVYTDHGRPGK	115.73	0.00052698	359350000.0	10609.9	8728.9	14256.7	10392.7	8270.9	8378.2	7310.7	10663.9	10060.5	12099.9	True	False	10143.501499935543	10171.202359068848	11264.413499333039	9481.58812670768	9358.668321748888	9997.168575204321	8950.310573664203	10288.844592643942	9592.78955089033	9908.49085957174	1.0237181063892065	1.0265137752277709	1.1368445163827807	0.9569154638264952	0.9445099616465088	1.0089496692169744	0.9032970510355851	1.0383866462070532	0.9681383055042697	1.0	13.274449625100294	-7.293133418561793	24.99717031809591	0.9731556015589253	1.0587743282307467	0.4405547323163399	0.045399640082502406	589.4592896476223	464906.5944566741	0.012480027981984087	0.018513120540490334	5.0917442477898676e-08	7.293133418561793	0.08561872667182135	
GYTS(ph)DSEVYTDHGRPGK	ddPTM_K562_Methotrexat_30min_R1	5	GYTSDSEVYTDHGRPGK	17	1	A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538	A0A669KB10	GBF1	Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1	1	GYT(0.2)S(0.799)DS(0.001)EVYTDHGRPGK;GYT(0.233)S(0.767)DSEVYTDHGRPGK;GYT(0.021)S(0.979)DSEVYTDHGRPGK;GYT(0.287)S(0.712)DS(0.001)EVYTDHGRPGK;GYT(0.03)S(0.8)DS(0.17)EVYT(0.001)DHGRPGK	272.09	1.3419999999999995e-128	564967000.0	13216.4	9970.3	16805.899999999998	12007.099999999999	10361.5	10004.8	8994.0	11817.599999999999	12329.0	14605.3	True	False	12635.422880870527	11617.72260887674	13278.571256212232	10954.456185225386	11724.21886563749	11938.086004297365	11011.133448169916	11401.968309720547	11755.827481032446	11960.138641749369	1.0564612383976835	0.9713702287967337	1.1102355628103338	0.9159138128204102	0.9802744948717942	0.9981561553663748	0.9206526594711243	0.9533307807920879	0.9829173250547671	1.0	13.54594649288187	-7.273259450627016	24.99846740049313	0.9627562423806185	1.0385571365046395	0.44223007531169833	0.04169150260120119	684.8297224663908	1448357.3534627827	0.01125880250345561	0.01685589911995503	5.3301637256318235e-08	7.273259450627016	0.07580089412402102	
GYYS(ph)PGIVSTR	ddPTM_K562_Methotrexat_30min_R1	5	GYYSPGIVSTR	11	0	Q12789-3;Q12789	Q12789-3	GTF3C1	General transcription factor 3C polypeptide 1	1	GYYS(1)PGIVSTR;GYYS(1)PGIVSTR;GYYS(0.997)PGIVS(0.003)TR;GYYS(1)PGIVSTR;GYYS(1)PGIVSTR	165.58	4.8275e-05	258438300.0	13761.8	12724.900000000001	14400.199999999999	13630.3	12694.400000000001	12637.1	12805.7	13333.3	13778.099999999999	14823.699999999999	True	False	13156.847749914046	14827.47343868244	11377.794810376558	12435.35276140596	14363.93610654332	15079.040724942657	15677.704202493831	12864.360281613615	13137.55913832533	12138.984285410099	1.0838507934907966	1.2214756267955342	0.9372938083503066	1.024414602492901	1.183289785110555	1.2421995424334	1.2915169699442592	1.0597559053664276	1.0822618128038457	1.0	13.567360090458822	-5.955194296166215	17.25880624546444	1.1226594560756797	0.8535980611856135	0.004080963580847308	0.10994999212902028	14579224.994583547	135073566.9712933	0.02915544843742511	130195264.32712993	1.1086786997854973e-06	5.955194296166215	-0.2690613948900662	
GYYS(ph)PYSVSGS(ph)GSTAGSR	ddPTM_K562_Methotrexat_30min_R1	1	GYYSPYSVSGSGSTAGSR	18	0	Q15149-4;H0YDN1;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149	Q15149-4	PLEC	Plectin	2	GY(0.232)Y(0.069)S(0.703)PYS(0.163)VS(0.225)GS(0.409)GS(0.169)T(0.03)AGS(0.001)R	110.26	0.0013505000000000001	10881000.0	1374.5	1673.3	2470.1	1990.2	2164.7	2161.4	2077.4	2347.2	2077.3	2502.1	True	False	1314.0786257798302	1949.7843837631196	1951.6597659137483	1815.7222559848383	2449.395992708146	2579.0599601879453	2543.3098315797392	2264.6476455943753	1980.7267764091723	2048.9454441552775	0.6413438823021409	0.9516038552051155	0.9525191466082996	0.8861740370707671	1.1954422699224005	1.2587255397867458	1.241277477072248	1.1052747412354973	0.9667054738130278	1.0	11.000665855885591	-5.779700607969995	0.6642919985871624	1.1304051240733144	0.036672793966003626	0.5958221574682947	0.11332891787604177	4.0938012399324295	0.8722020319198808	0.05334891675034477	3.904556776649816	1.6607313806401722e-06	5.779700607969995	-1.0937323301073107	
GYYS(ph)PYSVSGSGSTAGSR	ddPTM_K562_Methotrexat_30min_R1	5	GYYSPYSVSGSGSTAGSR	18	0	Q15149-4;H0YDN1;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149	Q15149-4	PLEC	Plectin	1	GYYS(0.957)PYS(0.039)VS(0.003)GSGSTAGSR;GYYS(0.877)PYS(0.123)VS(0.001)GSGSTAGSR;GYYS(0.996)PYS(0.004)VSGSGSTAGSR;GY(0.004)Y(0.039)S(0.664)PYS(0.289)VS(0.003)GSGSTAGSR;GY(0.216)Y(0.056)S(0.727)PYS(0.001)VSGSGSTAGSR	276.14	6.655199999999998e-135	539623000.0	8624.1	8513.5	12166.899999999998	9839.900000000001	10915.400000000001	10308.3	9969.3	11238.4	10784.2	11648.800000000001	True	False	8244.994890205771	9920.211170242828	9613.233960526279	8977.251244430316	12350.966424357428	12300.233083929577	12205.169300071204	10843.139102014246	10282.844895851247	9539.089440820113	0.8643377275532618	1.0399536802529392	1.0077727041104032	0.9411014856422718	1.2947741501934766	1.2894556823520127	1.2794899739426153	1.1367058846952187	1.0779692296256729	1.0	13.219635844193785	-7.750793881334174	24.999717159544026	1.1970418175630386	0.9719444663752174	0.5246344842015662	0.09998664052701421	169.83570427676716	398837.70125241776	0.03036542337868536	0.038793757394261746	1.7750317213003794e-08	7.750793881334174	-0.22509735118782126	
GYYSPYSVSGS(ph)GSTAGSR	ddPTM_K562_Methotrexat_30min_R1	1	GYYSPYSVSGSGSTAGSR	18	0	Q15149-4;H0YDN1;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149	Q15149-4	PLEC	Plectin	1	GYYS(0.039)PYS(0.084)VS(0.205)GS(0.476)GS(0.098)T(0.098)AGSR	178.02	1.4573e-11	13608000.0	959.43	1038.2	1649.6	1116.8	1403.5	1347.1	1375.1	1424.1	1157.9	1593.7	True	False	917.2546059890442	1209.744903617326	1303.371503117816	1018.8918779438585	1588.0848504485086	1607.4080097941983	1683.501179072544	1374.0135958124358	1104.0694817331055	1305.065486731252	0.7028418231229584	0.9269610727713965	0.9987019934013589	0.7807208820576801	1.2168621931962393	1.2316684688522506	1.2899744849502883	1.0528311489210214	0.8459878013466026	1.0	10.349906486102455	-6.509276736009473	0.7802157455555988	1.1035042143505116	0.6078127199232705	0.3491053296128419	0.15153767330505524	2.2920958440156407	1.3670538695684207	0.06624692469967029	0.9308627007573093	3.0954462269046763e-07	6.509276736009473	-0.49569149442724114	
GYYSPYSVSGSGSTAGS(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	GYYSPYSVSGSGSTAGSR	18	0	Q15149-4;H0YDN1;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149	Q15149-4	PLEC	Plectin	1	GYYSPYSVSGSGSTAGS(1)R;GYYSPYSVSGS(0.001)GS(0.002)TAGS(0.997)R	211.45	7.602700000000001e-27	20279700.0	3618.3	4513.3	4169.2	4042.4	4604.5	4219.1	3837.7999999999997	5872.9	5024.9	6831.0	True	False	3459.2438644300887	5259.0461120170285	3294.1418954890896	3688.0090682308874	5210.072457349592	5034.381363018854	4698.524343716533	5666.346778208592	4791.293495777428	5593.839706256626	0.6184023937191078	0.9401495910107799	0.5888874312584683	0.6592983106230063	0.9313946646562294	0.8999867045507174	0.8399461891017905	1.0129619502451719	0.8565303525623799	1.0	12.449623198057534	-7.7679833935378335	24.99688499855581	0.9187677515641277	0.7106607214388786	0.5289793386128143	0.10232952677073172	129.33161999226638	494021.34277021454	0.030910921955267765	0.03586712277304147	1.706147627074317e-08	7.7679833935378335	-0.20810703012524912	
HAALCAMEVLPLALPS(ph)PPR	ddPTM_K562_Methotrexat_30min_R1	1	HAALCAMEVLPLALPSPPR	19	0	Q9ULI0-2;Q9ULI0;H7BYF1	Q9ULI0-2	ATAD2B	ATPase family AAA domain-containing protein 2B	1	HAALCAMEVLPLALPS(1)PPR	83.87100000000001	0.016472999999999998	0.0	925.08	726.14	827.07	754.02	747.14	663.65	532.91	863.32	737.42	1064.1	True	False	884.4145908595158	846.1222927303849	653.479309580294	687.9162372915727	845.4020058169565	791.8909700095902	652.4286330736302	832.9565462655661	703.1375051555634	871.381178660178	1.0149571881038075	0.9710128167231811	0.7499350750093932	0.7894550102049506	0.9701862130151048	0.9087767665893236	0.7487293150820565	0.9559037613668763	0.8069229888998711	1.0	9.767160141968738	-6.544816587551978	23.536589459885523	0.8627908063879074	1.0039711486429772	0.2594351456302961	0.08689726813733105	126.56984270943066	135793.27519907212	0.021675714919115897	0.05736264959752064	2.85222257171686e-07	6.544816587551978	0.1411803422550698	
HAASYS(ph)SDSENQGSYSGVIPPPPGR	ddPTM_K562_Methotrexat_30min_R1	2	HAASYSSDSENQGSYSGVIPPPPGR	25	0	Q96D71-3;Q96D71;E9PMG1;H0YDT0;Q96D71-4;F2Z3L2;Q96D71-2	Q96D71-3	REPS1	RalBP1-associated Eps domain-containing protein 1	1	HAAS(0.012)YS(0.511)S(0.399)DS(0.077)ENQGSYSGVIPPPPGR;HAAS(0.02)YS(0.489)S(0.489)DS(0.002)ENQGSYSGVIPPPPGR	168.35	1.5769e-25	78260000.0	2772.0	2366.1499999999996	2572.84	2923.25	2345.97	2390.36	2351.8199999999997	2320.65	2371.62	2492.76	True	False	2650.146199099082	2757.1160698267554	2032.8360439389205	2666.973211138418	2654.506174995858	2852.263239768138	2879.2755021208563	2239.0314241430574	2261.3639038499587	2041.297008661729	1.2982658514923868	1.350668745472917	0.9958551035508765	1.3065091458135634	1.3004017366077207	1.3972798802257969	1.4105127719794703	1.0968670480788891	1.1078073863109734	1.0	10.995270394396272	-9.385640959844807	6.482158249320948	1.0701109395791621	1.2892422404837875	0.46615410204128505	0.11101263836697381	0.24686582347282304	11.929317255255315	0.06595045153898887	0.031118597177603017	4.114897675536034e-10	9.385640959844807	0.2191313009046254	
HAEATLGS(ph)GNLR	ddPTM_K562_Methotrexat_30min_R1	1	HAEATLGSGNLR	12	0	Q7L9L4;D6RCK3;Q9H8S9-2;Q9H8S9;Q7L9L4-2	Q7L9L4	MOB1B;MOB1A	MOB kinase activator 1B;MOB kinase activator 1A	1	HAEAT(0.007)LGS(0.993)GNLR	123.26	2.9375e-06	0.0	607.18	645.07	1003.2	973.05	567.59	488.25	651.77	641.41	666.45	909.42	True	False	580.489094216804	751.6568531847706	792.6420295391566	887.7442172575862	642.2380336772846	582.5974024066636	797.9460137329	618.8512467453514	635.4668849650474	744.7152255400235	0.7794779458092421	1.0093211839998484	1.0643558804164093	1.192058637734775	0.8623941228159684	0.7823089718411469	1.0714780447173975	0.8309904585294292	0.853301857101477	1.0	9.540545043211251														
HAFSGGRDTIEEHR	ddPTM_K562_Methotrexat_30min_R1	1	HAFSGGRDTIEEHR	14	1	P23381-2;P23381	P23381-2	WARS	Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS	0		53.946999999999996	0.031062	3694400.0	886.62	639.11	989.91	1227.7	760.47	668.21	755.91	992.36	883.95	1068.4	False	True	847.6452464088118	744.7120644874491	782.1414189205606	1120.069447127216	860.4851344642512	797.3321254729282	925.4420596849144	957.458136324997	842.8553574384483	874.9024069923258	0.9688454845184199	0.8511944401291164	0.8939756167883318	1.2802221575520716	0.9835212791588525	0.9113383608280803	1.0577660460054397	1.0943599293736945	0.9633707150674709	1.0	9.772978286947502														
HAIHS(ph)SDSTS(ph)SSSSEDEQHFERRRK	ddPTM_K562_Methotrexat_30min_R1	1	HAIHSSDSTSSSSSEDEQHFERRRK	25	3	Q6PL18-2;Q6PL18	Q6PL18-2	ATAD2	ATPase family AAA domain-containing protein 2	2	HAIHS(0.491)S(0.491)DS(0.079)T(0.079)S(0.231)S(0.231)S(0.231)S(0.084)S(0.084)EDEQHFERRRK	40.158	0.024433	6895600.0	546.3	567.06	685.08	486.54	465.46	514.41	546.57	663.09	512.84	697.77	True	False	522.28530612115	660.7570266280494	541.2910701721345	443.88579360208195	526.676148549884	613.8124521700198	669.1522357978909	639.7687488570101	488.998180336822	571.3970914704565	0.9140496406397165	1.1563885019568971	0.9473115601256458	0.7768429350239922	0.9217340382229007	1.0742309706029651	1.171080927408761	1.119656992321405	0.855793961216033	1.0	9.15834988245113	-8.264455994653897	24.6096664328783	1.0595641578337875	0.9460846118675574	0.15132450586546042	0.11654338494105362	417.2669032988813	3404066.9797558333	0.042826821142824226	0.03944310348422666	5.439312433347463e-09	8.264455994653897	-0.11347954596623011	
HANRT(ph)VAGVQDR	ddPTM_K562_Methotrexat_30min_R1	1	HANRTVAGVQDR	12	1	Q9C0H2-2;Q9C0H2;Q9C0H2-4	Q9C0H2-2	TTYH3	Protein tweety homolog 3	1	HANRT(1)VAGVQDR	97.223	0.008510700000000001	10413000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
HAPS(ph)PEPAVQGTGVAGVPEESGDAAAIPAK	ddPTM_K562_Methotrexat_30min_R1	1	HAPSPEPAVQGTGVAGVPEESGDAAAIPAK	30	0	P13051	P13051	UNG	Uracil-DNA glycosylase	1	HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK	109.27	1.7703e-12	38238000.0	4607.7	3287.7	5627.0	4932.6	3188.0	2648.6	2613.8	3677.5	3334.6	4305.5	True	False	4405.151025104199	3830.9365436550593	4445.969597504819	4500.166616355551	3607.2778790380075	3160.4044649550237	3200.011185993611	3548.160240573158	3179.5751738381687	3525.732228851984	1.2494286971244448	1.0865648027111954	1.2610060290802272	1.276377876779614	1.023128713382915	0.8963824419485439	0.9076160576821708	1.0063612351322768	0.9018198114476413	1.0	11.783707194153784	-7.913064362655563	4.603261633337159	0.9421698257878401	1.2107471552367075	0.8220805401255834	0.06063633405809231	0.08772238056379829	3.340646305236699	0.01950358680742742	0.022220346728549736	1.221618602271799e-08	7.913064362655563	0.26857732944886736	
HAPTYTIPLS(ph)PVLS(ph)PTLPAEAPTAQVPPSLPR	ddPTM_K562_Methotrexat_30min_R1	4	HAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPR	32	0	Q9NPI6-2;Q9NPI6	Q9NPI6-2	DCP1A	mRNA-decapping enzyme 1A	2	HAPT(0.006)Y(0.009)T(0.038)IPLS(0.938)PVLS(0.858)PT(0.147)LPAEAPT(0.003)AQVPPSLPR;HAPT(0.07)Y(0.066)T(0.083)IPLS(0.769)PVLS(0.784)PT(0.209)LPAEAPT(0.014)AQVPPS(0.004)LPR;HAPT(0.026)Y(0.01)T(0.066)IPLS(0.768)PVLS(0.752)PT(0.373)LPAEAPT(0.004)AQVPPS(0.002)LPR;HAPT(0.043)Y(0.012)T(0.103)IPLS(0.618)PVLS(0.783)PT(0.434)LPAEAPT(0.005)AQVPPS(0.001)LPR	57.896	0.0036799999999999997	176667000.0	6754.9	5806.469999999999	7893.5	7569.0	6049.1	5711.91	4890.6900000000005	6394.099999999999	6780.799999999999	7349.9	True	False	6457.962684088879	6765.890474385372	6236.762221059944	6905.437521630609	6844.662678195987	6815.655768111929	5987.551728222162	6169.215878789616	6465.562088035105	6018.761888012823	1.0729719507513302	1.1241332686479184	1.0362201291732935	1.1473186097266483	1.1372210440536046	1.1324016292597034	0.994814521595742	1.0249974984184775	1.0742345698892235	1.0	12.555251027173359	-8.7583978404266	24.99999843007795	1.0255947685850286	1.1088951380224696	0.5593138386682115	0.036884035451005624	63.04925563159926	518242.06571392925	0.014853375205564227	0.01100019713483075	1.7442236048685583e-09	8.7583978404266	0.08330036943744101	
HAPTYTIPLS(ph)PVLSPTLPAEAPTAQVPPSLPR	ddPTM_K562_Methotrexat_30min_R1	1	HAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPR	32	0	Q9NPI6-2;Q9NPI6	Q9NPI6-2	DCP1A	mRNA-decapping enzyme 1A	1	HAPT(0.019)Y(0.002)T(0.056)IPLS(0.637)PVLS(0.189)PT(0.071)LPAEAPT(0.022)AQVPPS(0.005)LPR	49.199	0.004795499999999999	32312000.0	573.44	503.56	586.54	671.22	616.42	761.4	558.03	608.75	768.29	779.49	True	False	548.2322642176689	586.7647309434991	463.4332695433584	612.3751847362796	697.4900345660626	908.5297740756458	683.182432519709	587.3399174572156	732.5723655935124	638.3168075874654	0.8588717353217232	0.9192374757625313	0.7260239179584135	0.9593593298142457	1.0927019722420344	1.4233210895847428	1.0702873939694841	0.9201385745693925	1.1476626604307791	1.0	9.31812882582448	-7.616248334444041	3.4828236045363545	1.1188266039879669	0.8426204632439517	0.47075088429828493	0.13068373375057626	0.22067136607028268	5.260713955615394	0.04254327553808359	0.05690548724242639	2.419645070962666e-08	7.616248334444041	-0.27620614074401517	
HAPTYTIPLSPVLS(ph)PTLPAEAPTAQVPPSLPR	ddPTM_K562_Methotrexat_30min_R1	1	HAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPR	32	0	Q9NPI6-2;Q9NPI6	Q9NPI6-2	DCP1A	mRNA-decapping enzyme 1A	1	HAPTYT(0.001)IPLS(0.038)PVLS(0.73)PT(0.23)LPAEAPT(0.001)AQVPPSLPR	68.733	4.0525e-05	22802000.0	1299.8	996.2	1231.9	1186.8	926.04	1067.9	963.14	941.04	1203.1	1383.1	True	False	1242.6623483365745	1160.8051174952623	973.3410249095764	1082.7550866258698	1047.8304915634742	1274.2565612495168	1179.1486623605049	907.9430898134508	1147.1681435988419	1132.6071874869765	1.0971697531725786	1.0248964780727299	0.8593809360059076	0.9559846508022625	0.9251490747541481	1.1250648727356491	1.0410923357963093	0.8016398799551949	1.012856139597854	1.0	10.145431874923295	-6.525121491568371	24.99235517238571	0.9632237258560271	1.0791014724278236	0.18490272666931673	0.08648303785387723	98.97000654542971	1102901.8296731706	0.022819600862453833	0.061213942905690835	2.984547590832476e-07	6.525121491568371	0.1158777465717965	
HAQDSDPRS(ph)PTLGIAR	ddPTM_K562_Methotrexat_30min_R1	3	HAQDSDPRSPTLGIAR	16	1	F5GX58;F8WDL1;Q99618;J3KMY0	F5GX58	CDCA3	Cell division cycle-associated protein 3	1	HAQDS(0.002)DPRS(0.75)PT(0.248)LGIAR;HAQDSDPRS(0.9)PT(0.1)LGIAR;HAQDSDPRS(0.914)PT(0.085)LGIAR	95.073	0.010626	118124600.0	6184.5	5458.82	6583.389999999999	6137.48	4878.0599999999995	4505.98	4401.04	5109.6	5381.84	5590.87	True	False	5912.636785111211	6360.797220925	5201.6264063474755	5599.4166574524315	5519.6103922898765	5376.69686287021	5388.085251360213	4929.892471851148	5131.639433086188	4578.309266362021	1.2914454749819604	1.3893332343577929	1.1361457043902912	1.2230315454206515	1.205600161798555	1.1743848110860797	1.17687227705385	1.0767932406996392	1.1208590627089396	1.0	12.160599205392462	-3.000000000752497	0.11084280430243769	0.9134819370679855	2.19577772637292	0.7270223300508665	0.054110188078176046	54.523248343796595	0.42226697989601253	0.4818467584128076	10.702044261021795	0.0009999999982673112	3.000000000752497	1.2822957893049347	
HAS(ph)APSHVQPSDSEK	ddPTM_K562_Methotrexat_30min_R1	1	HASAPSHVQPSDSEK	15	0	A0A3B3IRT3;O60343-2;O60343-3;O60343	A0A3B3IRT3	TBC1D4	TBC1 domain family member 4	1	HAS(0.891)APS(0.109)HVQPSDSEK	84.65299999999999	0.015463	6231600.0	3461.4	2346.6	5368.3	3362.2	2345.1	2411.5	2062.9	3079.9	3251.4	4069.4	True	False	3309.241000563335	2734.335764619935	4241.5671921601415	3067.4411461522573	2653.5217547465586	2877.4882455784327	2525.55783747273	2971.5781712960606	3100.2431236782268	3332.3922267077605	0.993052670703383	0.8205323919271424	1.272829518135865	0.9204922282461144	0.7962813421180338	0.8634902645962685	0.7578813253828337	0.8917252139409272	0.9303356006027881	1.0	11.702342502359384	-7.513331583709253	24.88705984969451	0.8613186941514412	1.022758153614862	0.24752197816741517	0.12006982064941735	573.3883896444215	1494681.66739719	0.034284184900880255	0.04695764938082632	3.06667968529294e-08	7.513331583709253	0.16143945946342075	
HAS(ph)APSHVQPSDSEKNR	ddPTM_K562_Methotrexat_30min_R1	1	HASAPSHVQPSDSEKNR	17	1	A0A3B3IRT3;O60343-2;O60343-3;O60343	A0A3B3IRT3	TBC1D4	TBC1 domain family member 4	1	HAS(0.906)APS(0.094)HVQPSDSEKNR	74.85300000000001	0.020891999999999997	7891800.0	5328.0	3381.8	7227.8	6250.2	3561.3	3451.3	3236.8	4167.8	4098.3	5941.6	True	False	5093.787499567063	3940.5849692285456	5710.7835537311785	5702.2546700615185	4029.6733722139425	4118.214879520981	3962.734794867287	4021.216111668473	3907.770927529827	4865.518664718834	1.0469156220699485	0.8099002882884352	1.173725546495502	1.171972622653794	0.8282104437157282	0.846408196804022	0.814452696194987	0.8264722404267766	0.8031560860851507	1.0	12.248377889284761	-7.784396334947596	24.994378435302682	0.8421715362951653	1.0422262986579403	0.44444041985855387	0.10760262832575032	222.50314127665638	242248.90841123133	0.03446303945405898	0.039102683910198555	1.6428717624296972e-08	7.784396334947596	0.20005476236277497	
HAS(ph)PILPITEFSDIPR	ddPTM_K562_Methotrexat_30min_R1	5	HASPILPITEFSDIPR	16	0	G5E972;P42167;H0YJH7	G5E972	TMPO	Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin	1	HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR;HAS(0.994)PILPIT(0.001)EFS(0.005)DIPR	166.79	5.0635e-08	378680000.0	14444.570000000002	11207.48	16269.980000000001	14408.13	11627.359999999999	11195.28	9873.1	12630.029999999999	14617.4	15195.59	True	False	13809.60399823976	13059.325575412358	12855.133540432114	13144.99161296495	13156.561643541823	13358.609415699497	12087.394001237093	12185.824686130843	13937.840264518087	12443.521402722321	1.1097826371897086	1.0494879345452257	1.033078428877837	1.0563723231985735	1.0573021267648166	1.0735393128167865	0.9713804967292203	0.9792906920596367	1.1200881015456643	1.0	13.603107192295777	-8.730651044687935	24.99604140652678	1.0159639744841413	1.0606786052451307	0.2158007476652547	0.04233539396915869	323.2413962316667	262428.70566734346	0.016088261512438164	0.012460378578573586	1.8592977995405763e-09	8.730651044687935	0.04471463076098936	
HASSSPES(ph)PKPAPAPGSHR	ddPTM_K562_Methotrexat_30min_R1	2	HASSSPESPKPAPAPGSHR	19	1	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	HAS(0.002)S(0.002)S(0.006)PES(0.989)PKPAPAPGSHR;HASSS(0.001)PES(0.999)PKPAPAPGSHR	83.25200000000001	0.0044014	11499500.0	788.85	615.6800000000001	1046.84	701.12	507.69000000000005	567.09	687.74	784.9100000000001	596.9000000000001	952.49	True	False	754.1730985423193	717.4106552293538	827.122589915043	639.6538981590246	574.4601337543303	676.6721166017311	841.9832018728462	757.3042704087768	569.1502492844729	779.9848311831909	0.9669073915171956	0.9197751373460484	1.0604341992912183	0.8200850485626848	0.7365016738632061	0.867545225944022	1.0794866364203615	0.9709217924917732	0.7296939972808262	1.0	9.607302257096302	-7.268603719466829	24.96664645037027	0.8861316056674186	0.9761125323997728	0.13880357231757579	0.1093068097031214	1250.2249809741897	4356845.726797298	0.032798692869266705	0.049836155923261176	5.387611615055573e-08	7.268603719466829	0.08998092673235425	
HATAEEVEEEERDR	ddPTM_K562_Methotrexat_30min_R1	2	HATAEEVEEEERDR	14	1	Q8TDN6	Q8TDN6	BRIX1	Ribosome biogenesis protein BRX1 homolog	0	;	124.39	0.0027069000000000004	19000300.0	1554.13	1687.26	2534.8999999999996	1962.24	1456.1	1320.5100000000002	1152.6	1462.87	1529.0700000000002	1856.49	False	True	1485.812306062718	1966.0510364836935	2002.8591314581422	1790.2134657741374	1647.6026724175792	1575.6798686165369	1411.099890189087	1411.420032937391	1457.9838694478285	1520.261671244088	0.9773398449536792	1.293231996617266	1.3174436804810887	1.177569295889133	1.0837625545537062	1.0364530649036874	0.9281954000947287	0.928405984071395	0.9590348142203078	1.0	10.570103949985675	-8.13014289177387	1.62411907357886	0.9511414511053746	1.2089471965212983	0.5805910099528582	0.08924523803253147	0.2586117980752274	1.3643455390906318	0.03744745170320552	0.037590898982375935	7.410663751787495e-09	8.13014289177387	0.2578057454159237	
HAY(ph)VY(ph)EMGSS(ph)T(ph)FSHR	ddPTM_K562_Methotrexat_30min_R1	1	HAYVYEMGSSTFSHR	15	0	A2RRH5-2;A2RRH5;A2RRH5-4	A2RRH5-2	WDR27	WD repeat-containing protein 27	4	HAY(1)VY(1)EMGS(0.02)S(0.972)T(0.638)FS(0.37)HR	70.27199999999999	0.016003	0.0	0.0	0.0	0.0	0.0	0.0	54.98	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	65.60410688032441	0.0	0.0	0.0	0.0											0.0														
HCAPS(ph)PDRS(ph)PELSSSR	ddPTM_K562_Methotrexat_30min_R1	3	HCAPSPDRSPELSSSR	16	1	A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37	A0A494C001	RBM15	Putative RNA-binding protein 15	2	HCAPS(1)PDRS(0.724)PELS(0.136)S(0.035)S(0.105)R;HCAPS(1)PDRS(0.999)PELS(0.001)SSR;HCAPS(1)PDRS(0.795)PELS(0.182)S(0.005)S(0.018)R	213.94	3.3565999999999995e-21	55663800.0	5493.5	4521.9	6249.4	5810.199999999999	4495.7	4099.8099999999995	3769.0899999999997	4311.93	4711.1	4385.39	True	False	5252.012317731167	5269.067115842022	4937.736343104076	5300.828786917453	5086.963350310905	4892.040258803614	4614.40437715841	4160.2769778748125	4492.0819892847685	3591.153375702058	1.462486217733437	1.467235332106064	1.3749722795225268	1.476079752756636	1.4165263407376527	1.3622476533314976	1.2849365912299167	1.1584793359212882	1.2508744459867527	1.0	11.810231555497976	-9.467591918685818	0.49150296303718255	1.0025975693034617	1.470434833283799	0.905582976365242	0.04502081165939394	0.24316714032385103	0.1458978670101935	0.047912102236354885	0.03014302242444657	3.4072820184129837e-10	9.467591918685818	0.4678372639803374	
HCAPS(ph)PDRSPELS(ph)SSR	ddPTM_K562_Methotrexat_30min_R1	1	HCAPSPDRSPELSSSR	16	1	A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37	A0A494C001	RBM15	Putative RNA-binding protein 15	2	HCAPS(1)PDRS(0.079)PELS(0.616)S(0.171)S(0.134)R	93.06200000000001	0.016354	61574000.0	3468.3	3341.3	4571.1	4070.1	2907.5	2796.0	2804.0	3356.9	3277.0	3410.0	True	False	3315.8376848251614	3893.3930326108384	3611.6885777775533	3713.280652237913	3289.887212453893	3336.2874288357025	3432.868377659379	3238.835924290966	3124.6529852659037	2792.415956424403	1.1874440400602004	1.3942740241307747	1.2933920426390209	1.3297734686320326	1.1781508427800584	1.1947673559019871	1.2293542334771121	1.1598687211479013	1.1189783449264197	1.0	11.44729814511129	-9.559528626319032	0.3712883708686777	0.9854599694898626	1.322147267372835	0.6939538075819551	0.05861595569647187	0.6613775811781342	0.27881358463417694	0.08327998149445201	0.0633763197729525	2.757219705500466e-10	9.559528626319032	0.33668729788297236	
HDEDGGTTDTATILSNQHEK	ddPTM_K562_Methotrexat_30min_R1	1	HDEDGGTTDTATILSNQHEK	20	0	H7C566;C9JWE6;E7ENB6;B7ZAG0;Q9UPQ7-3;Q9UPQ7	H7C566	PDZRN3	E3 ubiquitin-protein ligase PDZRN3	0		53.21	0.031901	40998000.0	3113.6	2902.0	3624.5	3532.5	3407.0	3705.6	3756.4	4088.6	3811.5	3952.4	False	True	2976.729872119371	3381.5061744340983	2863.7669817231613	3222.811209560066	3855.0802176544826	4421.654755469808	4598.868321626139	3944.801620559459	3634.3041969304186	3236.5820604609416	0.91971401203881	1.0447769008373349	0.8848121037027915	0.9957452489559574	1.1910960839674978	1.3661494356920747	1.4209027411377253	1.2188171184504606	1.1228833779091127	1.0	11.660255367160438	-7.787629323856905	3.583823741658517	1.2537422234780342	0.95684246886668	0.534104563088752	0.11758406915644527	0.16889910439854636	4.565349879063851	0.03777974949618374	0.04585031356493676	1.6306872522010736e-08	7.787629323856905	-0.2968997546113542	
HDLDLICR	ddPTM_K562_Methotrexat_30min_R1	2	HDLDLICR	8	0	P62140;E9PMD7;F8VR82;F8VYE8;F8W0W8;P62136-3;P36873;P62136;P36873-2;P62136-2	P62140	PPP1CB;PPP1CA;PPP1CC	Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit	0	;	148.99	1.1049e-08	12227100.0	12949.400000000001	11654.8	14679.5	14422.3	11881.6	11106.2	10036.2	12904.6	12459.6	13303.8	False	True	12380.159881173753	13580.557602272407	11598.473557236894	13157.919351065293	13444.23865984253	13252.31596642886	12287.07332805458	12450.737903603089	11880.35591553831	10894.352903542214	1.136383224482148	1.2465685408315343	1.0646317096507623	1.207774290732504	1.2340557331745	1.2164390197163497	1.127838746995201	1.1428616287576683	1.0905058814163717	1.0	13.411292886184482	-9.959866441713356	1.051935118257399	1.0011254239719591	1.1820917359726313	0.540943623058575	0.051639315681223624	0.4074757087112896	1.016355725341391	0.049120341198720094	0.01623174939145805	1.0968154471917357e-10	9.959866441713356	0.18096631200067215	
HDLLQRT(ph)LGEGHRAEYMTTS(ph)RGR	ddPTM_K562_Methotrexat_30min_R1	1	HDLLQRTLGEGHRAEYMTTSRGR	23	3	G5EA48;Q7Z6B7-2	G5EA48	SRGAP1		2	HDLLQRT(0.997)LGEGHRAEY(0.006)MT(0.017)T(0.017)S(0.963)RGR	40.81	0.034049	0.0	230.52	118.24	363.32	251.78	146.08	191.11	217.89	273.26	354.06	206.47	True	False	220.38661681685434	137.77715026364157	287.0640970615694	229.7068383136683	165.2920804798846	228.03930276280087	266.7573790328823	263.6492909147577	337.5998278801479	169.0762822647937	1.3034744664642113	0.814881593196295	1.6978377642110243	1.358598824369227	0.9776183759530352	1.3487362018385527	1.577733881178605	1.5593511247299097	1.996730844551137	1.0	7.401530484893202	-8.658320517071108	4.002194616808321	1.5810204533097245	1.2343758067733996	0.16333809505901176	0.3145904369908579	0.3649140670999537	10.813238685195945	0.12462411421296814	0.09333661526339884	2.1962384114182036e-09	8.658320517071108	-0.3466446465363249	
HDS(ph)PDLAPNVTYSLPR	ddPTM_K562_Methotrexat_30min_R1	3	HDSPDLAPNVTYSLPR	16	0	Q9BRD0;H7C462	Q9BRD0	BUD13	BUD13 homolog	1	HDS(1)PDLAPNVTYSLPR;HDS(0.999)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR	201.75	1.1561e-15	135438000.0	3214.77	2362.13	3448.5	3197.27	2750.0699999999997	2403.16	2470.01	2856.4300000000003	2658.67	3384.5	True	False	3073.452560056909	2752.4318331550703	2724.7069765408514	2916.970303181913	3111.7524080320095	2867.5366586125933	3023.9726182248382	2755.967737860064	2535.069012003936	2771.5342535244545	1.1089354411364452	0.9931076369180383	0.9831042041338459	1.0524749241228077	1.1227544469547552	1.0346387222045177	1.0910825346572453	0.9943834301724415	0.914680743627897	1.0	11.4364691227342	-9.492618048354291	6.25978802188906	0.9559197501681149	1.0513384326662558	0.42334285394140037	0.046883240737087134	0.17194730106485803	22.796480090769933	0.028580960923889176	0.012675110568973748	3.21648811970137e-10	9.492618048354291	0.0954186824981409	
HDSIPAADTFEDLS(ph)DVEGGGSEPTQR	ddPTM_K562_Methotrexat_30min_R1	2	HDSIPAADTFEDLSDVEGGGSEPTQR	26	0	O95671-3;O95671-2;O95671	O95671-3	ASMTL	N-acetylserotonin O-methyltransferase-like protein	1	HDSIPAADTFEDLS(1)DVEGGGSEPTQR;HDSIPAADTFEDLS(0.991)DVEGGGS(0.006)EPT(0.003)QR	164.01	2.9359e-26	22723000.0	4507.0	3569.5	4659.7	4078.0	3120.3	2933.2	2752.88	3320.2	3471.0	3324.5	True	False	4308.87767652942	4159.299203874056	3681.69264856819	3720.488071503452	3530.6741423972067	3499.9993870747103	3370.283416366246	3203.4266840927266	3309.6339676099915	2722.4008349363407	1.5827491753726912	1.5278055863406004	1.3523697911495391	1.3666202359912405	1.2968972449201317	1.2856297067498337	1.2379820682963665	1.176691779911107	1.2157041406752955	1.0	11.410663783539567	-3.000000000015897	0.14135094068147297	0.9507585224429107	3.1840631528775885	0.9486100397223326	0.036215397641315226	15.200911600205162	0.14312266683831934	0.1549776140565575	6.873388930457649	0.0009999999999633956	3.000000000015897	2.2333046304346778	
HDT(ph)PDPS(ph)PLR	ddPTM_K562_Methotrexat_30min_R1	1	HDTPDPSPLR	10	0	Q9BRD0;Q9BRD0-2	Q9BRD0	BUD13	BUD13 homolog	2	HDT(1)PDPS(1)PLR	83.226	0.026704000000000002	0.0	4597.6	3745.5	5771.1	4771.0	3931.4	3806.9	3529.0	4211.9	4181.6	4671.0	True	False	4395.495009010801	4364.380212385567	4559.824976747835	4352.733837455361	4448.448009300508	4542.529546793504	4320.468083009964	4063.7650896723544	3987.198328711594	3825.036637084572	1.1491380151487989	1.1410035057107533	1.1920996867165476	1.1379587309712667	1.1629818041928868	1.1875780489924412	1.129523320410078	1.0624120695402648	1.0423948074261118	1.0	11.901257850999949	-9.392719653271023	1.6254482209143055	1.0136390318690338	1.1618223426676555	0.9043608452138663	0.018824591238513617	0.11296154926409431	0.5297118252753142	0.016093228684411987	0.005680413821044433	4.0483713872802586e-10	9.392719653271023	0.14818331079862168	
HDT(ph)PDPS(ph)PLRGAR	ddPTM_K562_Methotrexat_30min_R1	1	HDTPDPSPLRGAR	13	1	Q9BRD0;Q9BRD0-2	Q9BRD0	BUD13	BUD13 homolog	2	HDT(1)PDPS(1)PLRGAR	95.631	0.024381	0.0	2631.8	2392.0	3164.4	3263.4	2705.7	2072.7	2021.3	2082.2	2339.5	2911.5	True	False	2516.1092232283404	2787.237342951882	2500.2356840846387	2977.3027887553644	3061.5469753177968	2473.219940539257	2474.6279785174384	2008.9678457978043	2230.737155639175	2384.1991369881666	1.05532679053261	1.1690455296753661	1.048668982928605	1.2487643093925596	1.2840986844686506	1.0373378222355814	1.037928392862144	0.8426174704247347	0.935633740081438	1.0	11.219289024634575	-8.772522434842195	2.1637011386176197	0.9228348380238411	1.157791593902728	0.5784132713344727	0.08336911849704987	0.21875045593638537	2.095032123015277	0.04212824198677042	0.02710492544115113	1.6884086371956242e-09	8.772522434842195	0.23495675587888676	
HEEEFDLFMR	ddPTM_K562_Methotrexat_30min_R1	2	HEEEFDLFMR	10	0	P51532;A0A2R8Y4C5;Q9HBD4;A0A2R8Y4P4;A0A2R8Y7S2;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A2R8Y6N0;A0A2R8Y7F3;A0A2R8Y7Y7;A0A2R8Y526;A0A2R8YF80;A0A2R8YF58;A0A2R8Y6V2;A0A2R8YDA1;A0A0A0MT49;P51532-5;P51532-2;P51532-3;P51532-4;A0A2R8Y523;A0A2R8Y5K3;K7EQF0;A0A2R8YFK5	P51532	SMARCA4	Transcription activator BRG1	0	;	237.51	6.2722e-45	8386800.0	2899.68	2502.34	2872.5	2770.23	2699.26	2361.41	2318.75	2475.11	2364.41	2605.4700000000003	False	True	2772.213539178795	2915.8091524925635	2269.6015050351148	2527.3682369595404	3054.260002437933	2817.7190619910284	2838.7887128023117	2388.058978394297	2254.4890951762436	2133.5941354794973	1.299316253770906	1.3666184697481247	1.0637456615079472	1.1845590475395396	1.4315093726818517	1.3206443602066722	1.3305195517723576	1.119265814750476	1.0566625852997935	1.0	11.059070049193807	-9.468710982986234	3.08803407133346	1.0330892928401179	1.282721274302634	0.5462989377983511	0.0966037397985473	0.22510555681033054	4.153638700407422	0.07524783956264051	0.028400585537926338	3.3985136376736213e-10	9.468710982986234	0.24963198146251608	
HELQANCYEEVKDR	ddPTM_K562_Methotrexat_30min_R1	1	HELQANCYEEVKDR	14	1	E9PP50;P23528;G3V1A4;E9PK25	E9PP50	CFL1	Cofilin-1	0		105.19	0.0071365	6918900.0	1274.0	1212.3	1606.3	1591.5	1178.8	1331.0	1238.7	1192.6	1313.0	1772.4	False	True	1217.996485444527	1412.6119694233137	1269.159581388306	1451.9756659631555	1333.8328619228357	1588.1969126539054	1516.510006921067	1150.6555820278845	1251.9589165865511	1451.4011850928487	0.8391866411261126	0.9732746424159399	0.8744374707859396	1.0003958112176063	0.9189966741259813	1.0942508032693288	1.0448592866651498	0.792789473955318	0.862586395439977	1.0	10.503230637798339	-3.0158147971808242	21.76160677566906	0.9417037710955353	0.0047030014301918666	0.0	0.09259413565785257	0.0	0.0	0.021979369819702926	0.0	0.000964240131584788	3.0158147971808242	-0.9370007696653434	
HETWSGHVIS(ph)S	ddPTM_K562_Methotrexat_30min_R1	1	HETWSGHVISS	11	0	Q9Y2V2	Q9Y2V2	CARHSP1	Calcium-regulated heat stable protein 1	1	HETWSGHVIS(0.601)S(0.399)	79.07	0.033935	11383000.0	2347.5	1987.5	2975.5	2363.5	1955.2	1576.0	1706.9	1798.2	2001.8	2037.5	True	False	2244.3067108171344	2315.900593276282	2350.983212613398	2156.295624570479	2212.3430706069976	1880.5396952235576	2089.7157752591993	1734.956286770537	1908.7367549299008	1668.489006221326	1.345113274614784	1.3880226867788403	1.4090492678388908	1.2923642987938544	1.3259560370837282	1.1270914511342622	1.2524600206937158	1.0398368106121005	1.1439912087000625	1.0	10.704326465205558	-8.59687979002851	0.5235687570324091	1.0175466252110243	1.407160553874417	0.8195632547438044	0.0586863182142613	0.3528354397518241	0.20606697451406486	0.05155544792131005	0.04949188325255092	2.5299981870673024e-09	8.59687979002851	0.3896139286633926	
HFFHHADEDDEEEDDS(ph)PPER	ddPTM_K562_Methotrexat_30min_R1	2	HFFHHADEDDEEEDDSPPER	20	0	A0A087WZV0;O43314-2;O43314;D6RFG4	A0A087WZV0	PPIP5K2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2	1	HFFHHADEDDEEEDDS(1)PPER;HFFHHADEDDEEEDDS(1)PPER	156.08	1.9725999999999997e-15	38275000.0	3548.6	2468.9	3427.5	3618.1000000000004	2402.93	2543.0	2155.19	2712.2	2574.7	2742.5	True	False	3392.607792973665	2876.843760875379	2708.1145895588716	3300.9067904626418	2718.9574133866977	3034.3987594882688	2638.5462192752198	2616.810388710407	2455.0027589759284	2245.806674631649	1.5106410677713882	1.2809845982612154	1.2058538342366665	1.469808967864096	1.2106818650508524	1.351139790332114	1.1748768267010279	1.1651984199127956	1.0931496404865708	1.0	11.13301802649031	-9.334095612737821	0.5636816795263007	0.9929748638721723	1.3609544954745836	0.6272754854715503	0.0927352615678514	0.5310806695181141	0.372437441014848	0.08975795616118382	0.05217144847160801	4.633449001313631e-10	9.334095612737821	0.3679796316024113	
HFIDVGAGVIDEDYR	ddPTM_K562_Methotrexat_30min_R1	1	HFIDVGAGVIDEDYR	15	0	P33316-2;A0A0C4DGL3;H0YNJ9;H0YNW5;P33316;H0YMP1;H0YMM5;H0YKC5;H0YKI0	P33316-2	DUT	Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial	0		123.29	0.00081189	8145100.0	2778.2	2162.8	2643.4	2513.4	2292.9	1854.9	1775.6	2620.8	2807.3	2790.1	False	True	2656.07365452275	2520.1659386857577	2088.586464198373	2293.054124305241	2594.456539788661	2213.3331730140726	2173.8234990627634	2528.6249785164196	2676.7892357451847	2284.78585337822	1.1625044205326964	1.1030206331851675	0.9141278869134487	1.0036188384634805	1.135535978548086	0.9687267494857342	0.9514342431036191	1.1067229669588796	1.171571170132798	1.0	11.157843236489308	-10.916555083566214	0.002807599587097965	6.952193934432304e-05	2.0786581638714754	0.01052301890734042	0.08907372417093944	475103.66679243563	425.82149066676595	159140.90794997817	156107.8588325065	1.2118389759171978e-11	10.916555083566214	2.078588641932131	
HFKDEDEDEDVAS(ph)PDGLGR	ddPTM_K562_Methotrexat_30min_R1	1	HFKDEDEDEDVASPDGLGR	19	1	O95365	O95365	ZBTB7A	Zinc finger and BTB domain-containing protein 7A	1	HFKDEDEDEDVAS(1)PDGLGR	143.09	7.621499999999999e-10	38637000.0	1169.3	820.38	1743.5	1310.5	764.76	510.45	531.3	743.43	861.47	1137.6	True	False	1117.8989720802874	955.9338509242746	1377.5631763372403	1195.6104996825095	865.3393446590673	609.0872382150159	650.4575495900243	717.2831455198647	821.4204477317724	931.5696164306158	1.2000165659799078	1.026153960008928	1.478754944386749	1.2834365554595777	0.9289046458757262	0.6538290080228065	0.6982382616581088	0.7699726707148231	0.8817595950360759	1.0	9.863519775931808	-7.892149574467866	3.9936437853772184	0.7806251406484608	1.247070749411538	0.700235386067876	0.13769056195467744	0.12385593680560122	3.659408485202564	0.04531516971312306	0.0520464512401003	1.2818890138659123e-08	7.892149574467866	0.4664456087630773	
HFNYPST(ph)PPSER	ddPTM_K562_Methotrexat_30min_R1	2	HFNYPSTPPSER	12	0	Q9BX63;Q9BX63-2	Q9BX63	BRIP1	Fanconi anemia group J protein	1	HFNYPS(0.088)T(0.898)PPS(0.014)ER;HFNYPS(0.01)T(0.981)PPS(0.01)ER	111.81	0.0030802	33887000.0	5228.5	4645.2	5453.4	5114.6	4628.8	4251.1	3673.8	4799.7	5002.799999999999	4997.2	True	False	4998.6614004291305	5412.740345100373	4308.805865120452	4666.2109589287775	5237.568333278268	5072.564910129996	4497.743168988953	4630.891830504141	4770.220919953695	4092.1586561419444	1.2215218960111947	1.3227102856768176	1.052942035532601	1.1402810474919478	1.2799035358556228	1.2395816820338952	1.0991126070437822	1.131650119076788	1.1656979410595536	1.0	11.998646365227236	-15.999999999899158	0.1276991397902641	0.36879195503126666	1.2648760085804442	0.3880901136966982	0.07530651812882312	165.12218599180136	1.3369088296432419	26.49410443955458	0.6433053801962673	1.0000000002321972e-16	15.999999999899158	0.8960840535491776	
HFSGLEEAVYR	ddPTM_K562_Methotrexat_30min_R1	4	HFSGLEEAVYR	11	0	H7C4C8;P50990-2;P50990	H7C4C8	CCT8	T-complex protein 1 subunit theta	0	;;;	169.21	2.5819e-08	104064000.0	14227.9	12045.0	14217.0	15317.099999999999	12868.9	12130.599999999999	11829.199999999999	13622.099999999999	13505.8	15296.7	False	True	13602.458552006434	14035.231520006455	11233.045986800427	13974.273624331916	14561.38591516694	14474.666768324172	14482.199220045764	13143.00302192021	12877.918305890824	12526.319401946386	1.0859102435063912	1.1204593360301518	0.8967555134395658	1.1155929508040918	1.1624632462193434	1.155540291114966	1.1561416211210027	1.0492310310942576	1.0280688119680075	1.0	13.612674950586186	-4.217042363346275	2.111076461394431	1.0816988136755925	54.20432409367827	0.0	0.0806053372206236	23476.249958313856	60.30293098886274	0.022196801879425083	6053562.617313306	6.066771482525251e-05	4.217042363346275	53.12262528000267	
HFSQS(ph)EETGNEVFGALNEEQPLPR	ddPTM_K562_Methotrexat_30min_R1	1	HFSQSEETGNEVFGALNEEQPLPR	24	0	A0A1B0GUI1;Q6GYQ0-3;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-2	A0A1B0GUI1	RALGAPA1	Ral GTPase-activating protein subunit alpha-1	1	HFS(0.019)QS(0.867)EET(0.113)GNEVFGALNEEQPLPR	73.153	0.0009144	13745000.0	778.3	659.1	1015.4	818.28	800.03	613.48	642.74	818.33	847.74	961.43	True	False	744.086863910106	768.005072215546	802.2814162620216	746.542662861659	905.2479678691269	732.0263275544091	786.8908063683267	789.5488700661409	808.328752434945	787.3057105528189	0.9451053814758105	0.9754852046942214	1.0190214620680031	0.9482246259047994	1.1498049051790733	0.9297866352835235	0.999473007525627	1.0028491594602393	1.0267025141572572	1.0	9.620780132315861	-6.412160505819513	1.6954319200139825	1.0100356532331656	0.9318675920127871	0.1214082130722981	0.05525371990783881	1.5082199790496584	5.420435296333827	0.014963825715891752	0.17460221882078866	3.8711454934083935e-07	6.412160505819513	-0.07816806122037845	
HFSTESVPDEEGRQS(ph)PAMRPR	ddPTM_K562_Methotrexat_30min_R1	4	HFSTESVPDEEGRQSPAMRPR	21	2	Q6P0Q8-2;Q6P0Q8;A0A669KBJ4;V9GXZ1	Q6P0Q8-2	MAST2	Microtubule-associated serine/threonine-protein kinase 2	1	HFSTESVPDEEGRQS(1)PAMRPR;HFSTESVPDEEGRQS(0.999)PAMRPR;HFST(0.001)ES(0.003)VPDEEGRQS(0.995)PAMRPR;HFSTES(0.001)VPDEEGRQS(0.999)PAMRPR	53.519	0.024307	88885000.0	3673.91	3323.63	4872.8	4747.2	3824.7	3200.49	3207.13	3351.21	3903.9300000000003	4183.72	True	False	3512.409315415621	3872.803365449486	3850.0658707519956	4331.020346503479	4327.715089070472	3818.9393966789635	3926.410542097973	3233.346044816089	3722.43714640498	3426.0077669243133	1.0252193089944086	1.130412897144796	1.123776165343717	1.2641595236054115	1.263194768806862	1.114690816975994	1.1460600235658236	0.943764948822289	1.086523265458556	1.0	11.742312706746722	-9.1747333727712	6.836274294731185	1.0118558536244426	1.1583878439389084	0.43867924602856945	0.07365005198556411	0.2429182188295113	16.22534198875164	0.03721083449435497	0.021324891454906438	6.687543611873517e-10	9.1747333727712	0.14653199031446573	
HFTEDIQTR	ddPTM_K562_Methotrexat_30min_R1	1	HFTEDIQTR	9	0	H7C5L6;P78362;P78362-2;H7C2I2;H7C521;A8MPP7;A8MPY5;E7ETV6;H3BLV9;Q9UPE1-2;Q9UPE1-3;Q9UPE1-4;Q9UPE1;Q96SB4-4;Q96SB4;Q96SB4-3	H7C5L6	SRPK2;SRPK3;SRPK1	SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal;SRSF protein kinase 3;SRSF protein kinase 1	0		131.52	0.0015164999999999998	10115000.0	332.12	304.02	473.83	268.71	394.02	309.09	254.21	446.16	297.18	630.69	False	True	317.52040246925935	354.2541375435748	374.37955827007465	245.152611499189	445.84053635462817	368.8172680181786	311.2230635823075	430.4682999141045	283.3641666650352	516.465929488946	0.6147944798284226	0.6859196653961603	0.7248872324269893	0.47467334726566124	0.8632525611046538	0.714117324995922	0.6026013446623077	0.8334882812890716	0.5486599415094623	1.0	9.012529369497024	-13.16378091910378	2.375206255167376	1.7862661658173857	0.6790035959921997	0.4240003296059651	0.11397357393887418	12873484.013797712	2343332.7297239313	54674401.22496318	0.02680083191181291	6.858341098711658e-14	13.16378091910378	-1.1072625698251861	
HGAPAAPS(ph)PPPR	ddPTM_K562_Methotrexat_30min_R1	1	HGAPAAPSPPPR	12	0	Q4KMP7	Q4KMP7	TBC1D10B	TBC1 domain family member 10B	1	HGAPAAPS(1)PPPR	87.51899999999999	0.015638	3512100.0	2554.9	2074.9	2991.9	2410.8	1965.1	2231.0	1856.0	2211.5	2154.7	2166.9	True	False	2442.5896551508818	2417.7419577302926	2363.941076732661	2199.448907008466	2223.5450941334957	2662.10917515467	2272.255245697507	2133.7202915098687	2054.5284673031556	1774.4534123096885	1.3765307323405716	1.3625277175258594	1.332208025487508	1.2395078347791555	1.253087333095578	1.5002417965369848	1.2805381251119254	1.2024662223915736	1.1578373672988753	1.0	10.793158982074704	-9.796736920106865	1.238199313207102	1.0085276323727386	1.3368001556067517	0.6993385591976347	0.07110437451603432	0.25158635464206647	0.8088659302794687	0.0706644117858896	0.022600271205207068	1.5968461659803813e-10	9.796736920106865	0.3282725232340131	
HGAPS(ph)PSHPISAPQAAAAAALR	ddPTM_K562_Methotrexat_30min_R1	2	HGAPSPSHPISAPQAAAAAALR	22	0	A0A494C1F2;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A0A0MSW3;H0YF36	A0A494C1F2	NUP214	Nuclear pore complex protein Nup214	1	HGAPS(0.498)PS(0.498)HPIS(0.004)APQAAAAAALR;HGAPS(0.99)PS(0.01)HPISAPQAAAAAALR	97.04899999999999	4.3224e-05	27839000.0	2007.81	1555.37	2227.74	1956.75	1660.88	1484.63	1115.1	1693.0	1652.5	1603.23	True	False	1919.5490764838123	1812.3684557303795	1760.167817868383	1785.2047655503627	1879.3148317869025	1771.5137358627867	1365.1895606019868	1633.4562303984653	1575.6756356887104	1312.8695113836648	1.462101952890012	1.3804635114271797	1.3407027908000544	1.3597731915252511	1.4314559181180522	1.3493448667230803	1.0398516751014963	1.2441878010229108	1.2001768812713671	1.0	10.358507815793956	-9.17275732030779	0.36913142209064115	0.9961531707414499	1.4519877286769818	0.7084214176606118	0.08095547257800027	0.7281520678101092	0.28217866905625033	0.11158265520826754	0.10939420790041512	6.718041459308489e-10	9.17275732030779	0.45583455793553185	
HGAPS(ph)PSHPISAPQAAAAAALRR	ddPTM_K562_Methotrexat_30min_R1	2	HGAPSPSHPISAPQAAAAAALRR	23	1	A0A494C1F2;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A0A0MSW3;H0YF36	A0A494C1F2	NUP214	Nuclear pore complex protein Nup214	1	HGAPS(0.726)PS(0.274)HPISAPQAAAAAALRR;HGAPS(0.89)PS(0.11)HPISAPQAAAAAALRR	119.34	1.3441e-06	97622000.0	4068.8999999999996	3006.5	4432.9	4564.1	2958.8	2446.8999999999996	2808.0	3820.5	3403.2	3969.4	True	False	3890.036027963294	3503.273023237809	3502.4948691628088	4163.97243922239	3347.934061636656	2919.7287945701305	3437.7654794820023	3686.130849519985	3244.9859748113895	3250.5031957275723	1.1967488704752904	1.0777632914935984	1.0775238965359122	1.2810239487521415	1.0299740871004668	0.898239016779861	1.0576102444693996	1.13401852807436	0.998302656363041	1.0	11.666447357199095	-7.954570783281156	24.999895398380033	1.0213527844561898	1.147841783037532	0.4318477874691704	0.07754831745509928	141.33070679689698	77774.33482379396	0.02503003556615914	0.028381382944395375	1.1102715634994823e-08	7.954570783281156	0.12648899858134222	
HGAPSPS(ph)HPISAPQAAAAAALR	ddPTM_K562_Methotrexat_30min_R1	1	HGAPSPSHPISAPQAAAAAALR	22	0	A0A494C1F2;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A0A0MSW3;H0YF36	A0A494C1F2	NUP214	Nuclear pore complex protein Nup214	1	HGAPS(0.187)PS(0.757)HPIS(0.056)APQAAAAAALR	63.488	0.0083518	7448400.0	1443.0	1819.6	1781.6	1821.7	1827.0	1458.1	1434.4	1570.3	1567.5	1698.7	True	False	1379.5674477994132	2120.2579720883127	1407.6665070045476	1661.9943893717127	2067.2825235264863	1739.8571888359584	1756.1007135929422	1515.0716589454878	1494.627267135887	1391.0489692604503	0.991746141426537	1.5242151922340632	1.0119460479906268	1.1947777728165172	1.4861320983010071	1.2507519341759417	1.2624291109798753	1.089157673400221	1.0744605690844256	1.0	10.44195749279938	-9.366782613962243	2.8614211980212465	1.0426638353243864	1.2561956629415902	0.22882915248929114	0.1616773029199709	0.4139605303478288	6.42380529960309	0.10622471116440778	0.04324993378434914	4.2975148497804615e-10	9.366782613962243	0.2135318276172038	
HGESAWNLENR	ddPTM_K562_Methotrexat_30min_R1	3	HGESAWNLENR	11	0	P18669	P18669	PGAM1	Phosphoglycerate mutase 1	0	;;	145.23	2.6379e-07	42978000.0	12396.3	10388.4	13308.600000000002	14677.1	11111.6	10185.3	9744.1	12559.4	12615.9	14135.599999999999	False	True	11851.373494910506	12104.906527391866	10515.306732779924	13390.381430667812	12572.970163337115	12153.465074721138	11929.462467457473	12117.678783264315	12029.389562653676	11575.505863235414	1.0238320151995488	1.0457345597169851	0.9084101253991194	1.156785853583865	1.0861702557008515	1.0499294992645947	1.0305780678964753	1.0468379461282016	1.039210701007878	1.0	13.498787621884565	-7.257425307574446	24.995490694171714	1.0600855293386706	0.9979664773038198	0.25573977313634366	0.05118387581066873	537.3069206471316	3345778.718282009	0.014193542509034417	0.023537871343466403	5.5280847490265077e-08	7.257425307574446	-0.0621190520348508	
HGGNVSLDVLPVKGPQGS(ph)PLLSR	ddPTM_K562_Methotrexat_30min_R1	1	HGGNVSLDVLPVKGPQGSPLLSR	23	1	Q8TEP8;H0Y966;A0A0A0MR42;K7ENP4;Q8TEP8-1;K7EPA2	Q8TEP8	CEP192	Centrosomal protein of 192 kDa	1	HGGNVSLDVLPVKGPQGS(0.819)PLLS(0.181)R	61.222	0.009454700000000002	8988800.0	2733.5	1751.5	2776.5	2254.6	1617.6	1583.2	1462.8	2087.8	1826.5	2818.2	True	False	2613.338613000483	2040.9056045903938	2193.7505931174924	2056.9427184923215	1830.3427531781313	1889.1309933235646	1790.8701365335721	2014.3708906236957	1741.5864136674297	2307.7966710836513	1.1323955206908938	0.8843524345808438	0.9505822677555873	0.8913015363378878	0.7931126585422595	0.8185864105768479	0.7760086315111329	0.8728545785092175	0.7546533173781071	1.0	11.172300405291336	-3.000000000000811	0.7122787361417481	0.8315449887487765	40.14447976904443	0.5660786598680816	0.07233554170136718	208.69979317090468	1.05223318172623	0.026476835196415423	13092.571203566338	0.0009999999999981328	3.000000000000811	39.312934780295656	
HGGS(ph)PQPLATTPLSQEPVNPPSEAS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	1	HGGSPQPLATTPLSQEPVNPPSEASPTR	28	0	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	HGGS(0.997)PQPLAT(0.001)T(0.002)PLSQEPVNPPS(0.096)EAS(0.522)PT(0.382)R	92.46700000000001	5.5357e-05	68409000.0	932.32	651.91	1056.1	693.04	687.41	900.29	592.33	839.97	616.02	837.25	True	False	891.336329128447	759.6270469246494	834.4390424604303	632.2822592140152	777.8164638737499	1074.2583008964573	725.1750806487088	810.4277790004712	587.3813646577664	685.6159118816224	1.3000519878283454	1.1079483917459105	1.2170648726199684	0.9222105967155328	1.1344784308448879	1.5668514722014464	1.0576987320182216	1.1820434224992122	0.8567207301909628	1.0	9.421256781906472	-9.751193319054455	24.695170748274457	0.9283603761371982	1.182376581553056	0.2865879006448938	0.16254261770933037	206.4612811221138	497625.16109171906	0.11463728628295954	0.04222408610528686	1.7733999053337271e-10	9.751193319054455	0.2540162054158578	
HGGS(ph)PQPLATTPLSQEPVNPPSEASPT(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	HGGSPQPLATTPLSQEPVNPPSEASPTR	28	0	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	HGGS(0.999)PQPLAT(0.001)TPLSQEPVNPPS(0.084)EAS(0.248)PT(0.668)R;HGGS(0.999)PQPLATT(0.001)PLSQEPVNPPS(0.172)EAS(0.247)PT(0.581)R	127.23	2.9993999999999998e-15	93591000.0	1779.99	1597.7199999999998	2107.57	1766.97	1375.9	1473.71	1435.6399999999999	1907.19	1657.0700000000002	1552.2800000000002	True	False	1701.7437708998457	1861.716073403463	1665.219858648168	1612.0624834979046	1556.8549666776648	1758.4836004111107	1757.6188151579568	1840.1130466944176	1580.0331773861967	1271.1470500992586	1.3387465838566541	1.4645953615343632	1.3100135491941218	1.2681951182375204	1.2247638591900885	1.3833832995748194	1.3827029807611255	1.4476004538977065	1.2429979499718922	1.0	10.311915219943987	-10.044611711545942	8.01437404551091	1.0000028251666597	1.3496280929642634	0.7010668762608047	0.0699743220378399	0.4144613498068542	73.94945171305184	0.07313684930623131	0.018915131977171633	9.023775632396911e-11	10.044611711545942	0.3496252677976037	
HGGSPQPLATTPLSQEPVNPPS(ph)EASPTR	ddPTM_K562_Methotrexat_30min_R1	2	HGGSPQPLATTPLSQEPVNPPSEASPTR	28	0	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	HGGSPQPLATTPLSQEPVNPPS(0.576)EAS(0.344)PT(0.08)R;HGGSPQPLATTPLSQEPVNPPS(0.598)EAS(0.285)PT(0.116)R	106.21	1.8365999999999998e-11	61052000.0	2528.6000000000004	2125.3	3077.6000000000004	2664.8	2676.86	2183.09	2180.01	2560.4	2999.3999999999996	2520.1000000000004	True	False	2417.4457716601505	2476.4697010767704	2431.6538178924548	2431.181121368907	3028.9140098123203	2604.9412457142116	2668.932736084602	2470.3492807514663	2859.9585486745646	2063.6854697317117	1.1714216178371548	1.2000228413677412	1.1783064103313092	1.1780773557924848	1.4677207618300925	1.2622762935152447	1.2932846478933513	1.1970570694925824	1.3858500195993393	1.0	11.011007388254365														
HGGSPQPLATTPLSQEPVNPPSEAS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	2	HGGSPQPLATTPLSQEPVNPPSEASPTR	28	0	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	HGGSPQPLATTPLSQEPVNPPS(0.394)EAS(0.568)PT(0.038)R;HGGSPQPLATTPLSQEPVNPPS(0.27)EAS(0.69)PT(0.041)R	192.36	4.7808e-39	67158000.0	4065.8	3993.8	5135.799999999999	3925.4	3945.9	3679.4	3637.3	4524.5	3916.2	3906.3	True	False	3887.0723002514583	4653.707567007201	4057.8657648596495	3581.2662765766704	4464.855013455478	4390.391976272566	4453.05711485751	4365.370770488988	3734.136716783134	3198.831217179076	1.215153922275185	1.4548149780503654	1.2685463812742588	1.119554622745882	1.395776991757902	1.3724987904001642	1.3920888013542918	1.364676806655225	1.1673440901568177	1.0	11.643329156902269	-10.000303017681487	3.6271457169328967	1.0008516127093359	1.32445956221323	0.5435453214975106	0.0939029700393102	0.15465148176129023	5.2745875805647575	0.09312020697746459	0.024613036813369356	9.993025193564808e-11	10.000303017681487	0.32360794950389415	
HGGVCAPAAVATS(ph)PPGAIPK	ddPTM_K562_Methotrexat_30min_R1	3	HGGVCAPAAVATSPPGAIPK	20	0	A0A494BZT8;Q9Y6A5;E7EMT0	A0A494BZT8	TACC3	Transforming acidic coiled-coil-containing protein 3	1	HGGVCAPAAVAT(0.451)S(0.549)PPGAIPK;HGGVCAPAAVAT(0.206)S(0.794)PPGAIPK;HGGVCAPAAVAT(0.183)S(0.817)PPGAIPK	101.48	0.00019498	119045000.0	12598.6	8568.009999999998	16416.9	12904.5	8705.1	7965.68	7727.34	10269.93	9554.16	13337.6	True	False	12044.780629137698	9983.728021231249	12971.217040212707	11773.182520528764	9849.973232375702	9504.934923507864	9460.39269950871	9908.730740848263	9109.989186972249	10922.031396013523	1.1027967410470887	0.9140907638184643	1.1876194610598836	1.077929745269356	0.9018444349071258	0.8702533969072008	0.8661751973137247	0.9072241583616846	0.8340929316772832	1.0	13.414953588590901	-7.7798971187096795	7.0472970242860145	0.888546444379645	1.0680425514222687	0.5634890542303443	0.07483879076582248	0.11367753885267486	23.987086149387054	0.022521046923426366	0.02645007814038492	1.659980098405326e-08	7.7798971187096795	0.17949610704262364	
HGLLLPAS(ph)PVR	ddPTM_K562_Methotrexat_30min_R1	2	HGLLLPASPVR	11	0	Q96E09	Q96E09	FAM122A	Protein FAM122A	1	HGLLLPAS(1)PVR;HGLLLPAS(1)PVR	151.16	2.1381e-08	248190000.0	5173.6	4331.200000000001	5712.299999999999	5733.3	4470.6	4063.8	3704.7	5076.5	5023.3	5821.0	True	False	4946.174738693724	5046.857182187792	4513.366293198289	5230.670490522501	5058.562260359887	4849.071835945113	4535.573280568721	4897.956617612411	4789.7678794281965	4766.76049335673	1.0376386112931493	1.0587603864766069	0.9468414239583491	1.0973218599533805	1.0612159489468436	1.0172677739322329	0.9515001407957865	1.027523120668329	1.0048266293436667	1.0	12.218793423447671	-8.522010406882018	24.99898443471852	0.9962743354706064	1.0393371067993447	0.2167221035330854	0.03980546790137389	54.373532235877754	1565497.1995191441	0.015223320180479465	0.011934666243220178	3.006004269692284e-09	8.522010406882018	0.04306277132873826	
HGLQLGAQS(ph)PGR	ddPTM_K562_Methotrexat_30min_R1	3	HGLQLGAQSPGR	12	0	Q8N1G0;A6PVV7	Q8N1G0	ZNF687	Zinc finger protein 687	1	HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR	135.94	1.0218e-05	76742400.0	6075.2	5241.74	7077.9	5967.4	5440.7	5209.9	4853.0	6045.700000000001	6372.9	6401.2	True	False	5808.141482239085	6107.8484406540965	5592.345515226475	5444.247306986198	6156.247414203916	6216.639440447474	5941.408786298488	5833.069304264623	6076.625270003377	5241.880651103777	1.1080262731689763	1.1652017371604928	1.0668586119084762	1.0386057351076485	1.174434868696906	1.1859559296029456	1.1334498401918807	1.1127817843461123	1.1592452546060599	1.0	12.355868790937942	-5.993380340105084	18.224722087644064	1.1204386895175578	1.0916829043833793	0.0	0.059176540716101886	8657.022911453054	427.6539338854288	0.014242776237622072	5944.1946953694305	1.0153590869704534e-06	5.993380340105084	-0.028755785134178424	
HGLTSGSAS(ph)PPPPALPLYPDPVR	ddPTM_K562_Methotrexat_30min_R1	2	HGLTSGSASPPPPALPLYPDPVR	23	0	Q92610;H0YM74	Q92610	ZNF592	Zinc finger protein 592	1	HGLT(0.004)S(0.005)GS(0.051)AS(0.94)PPPPALPLYPDPVR;HGLT(0.004)S(0.015)GS(0.291)AS(0.689)PPPPALPLYPDPVR	104.55	8.8224e-06	49790000.0	2690.2	2166.5	3184.3999999999996	2675.8999999999996	2201.74	2188.5	2017.43	2452.9	2473.5	2577.8999999999996	True	False	2571.942029154527	2524.477300796512	2516.03795740081	2441.3080016027675	2491.3074019426417	2611.396651647689	2469.89003250405	2366.630116683046	2358.5075248871567	2111.0173296382604	1.218342451786149	1.1958581605907996	1.1918603992852834	1.1564604266044112	1.1801454052343316	1.237032313749491	1.1699998848078075	1.1210851201721714	1.1172374057636494	1.0	11.043722706682333	-10.01537463805081	0.8865219832381215	1.001393851818475	1.1951621262904277	0.8667330751801763	0.02339950725377543	0.22621732027533387	0.40175573020701244	0.02383485212676458	0.008398933234133934	9.652178880680283e-11	10.01537463805081	0.19376827447195266	
HGS(ph)FHEDEDPIGSPR	ddPTM_K562_Methotrexat_30min_R1	1	HGSFHEDEDPIGSPR	15	0	Q96T58	Q96T58	SPEN	Msx2-interacting protein	1	HGS(1)FHEDEDPIGSPR	140.89	4.0757e-06	11235000.0	1001.9	985.63	1108.9	1244.1	917.75	872.83	703.5	715.34	808.45	1357.7	True	False	957.8576756411868	1148.4886046545416	876.1570440151227	1135.0316845898599	1038.4502112569417	1041.4920445317127	861.2777830539851	690.1810867414282	770.8653359591762	1111.8073736180097	0.861532040864377	1.0329924336777556	0.7880475204656712	1.0208887902013766	0.9340198993982641	0.9367558349091722	0.7746645718414703	0.6207739785853928	0.6933443276695042	1.0	10.118691139990993	-8.819163576554141	4.578821838656613	0.7354718783153259	0.9322128403333984	0.29785632575163123	0.11361729431538646	0.20725732222257987	8.79424139571759	0.045975659020861065	0.031078409356009994	1.5164790796481237e-09	8.819163576554141	0.19674096201807245	
HGS(ph)VSADEAAR	ddPTM_K562_Methotrexat_30min_R1	2	HGSVSADEAAR	11	0	A0A1B0GU90;A0A1B0GW73;H3BNF1;A0A1B0GTV3;A0A0S2Z5D0;H3BUV4;A0A1B0GUD2;H3BUT1;A0A1B0GTU6;Q9NWW5;Q9NWW5-2	A0A1B0GU90	CLN6	Ceroid-lipofuscinosis neuronal protein 6	1	HGS(0.993)VS(0.007)ADEAAR;HGS(0.998)VS(0.002)ADEAAR	104.81	0.0035291	1182700.0	899.77	856.3399999999999	910.28	866.06	876.9300000000001	587.8	505.75	1124.62	1158.01	1006.1700000000001	True	False	860.2171881541775	997.8356297087857	719.2246677122247	790.1338644448944	992.2616657668752	701.3840309977207	619.177311698014	1085.066477159316	1104.1743678571152	823.9428630133552	1.044025292006485	1.2110495454253505	0.8729059987022023	0.9589668166493811	1.2042845569872869	0.8512532391294614	0.7514808847709842	1.316919565503571	1.3401103613166654	1.0	9.686400485793232	-9.289490572166086	24.840504706974926	1.2463862608508256	0.9915522381126985	0.29966200085496697	0.1622065785414662	832.6160980362976	737311.1027014005	0.09024116613384303	0.04336540480336139	5.13463323843979e-10	9.289490572166086	-0.25483402273812705	
HGSLGFLPR	ddPTM_K562_Methotrexat_30min_R1	2	HGSLGFLPR	9	0	F8WCR1;H7C3M2;H7C422;P39023	F8WCR1	RPL3	60S ribosomal protein L3	0	;	113.71	0.0057	21381000.0	10496.2	9174.6	10904.6	11496.2	8829.6	8296.8	8864.3	10227.2	10066.3	11562.0	False	True	10034.799615795018	10690.546708464188	8615.873480176127	10488.345995001957	9990.847164602876	9900.039177240364	10852.344921571334	9867.50357916786	9598.319910156288	9468.00976192931	1.0598636744276246	1.1291229072714601	0.9099983731343828	1.1077667069139916	1.0552214684838925	1.0456304361924336	1.1462118432966144	1.0421940647806371	1.0137632038309627	1.0	13.208845478216633	-9.693421342929357	3.8818622157096403	1.0051036351935005	1.063669236172715	0.12250589535408363	0.061041626690115536	0.48057325552945424	13.606121876054155	0.04927700635171971	0.015545197297160935	2.0257164604257414e-10	9.693421342929357	0.05856560097921437	
HGTDLWIDNMSSAVPNHS(ph)PEKK	ddPTM_K562_Methotrexat_30min_R1	2	HGTDLWIDNMSSAVPNHSPEKK	22	1	E9PIY6;Q8N6H7;H0YF45;E9PJT7;E9PK28;E9PN48	E9PIY6	ARFGAP2	ADP-ribosylation factor GTPase-activating protein 2	1	HGTDLWIDNMS(0.214)S(0.214)AVPNHS(0.573)PEKK;HGTDLWIDNMS(0.11)S(0.034)AVPNHS(0.856)PEKK	83.24700000000001	0.00051789	41645000.0	7783.9	4491.6	12327.400000000001	8363.0	4634.2	3674.9	3495.6	5302.8	5738.2	8849.1	True	False	7441.729076178697	5233.76055585396	9740.047203888558	7629.828774395135	5243.678527929085	4385.022414960062	4279.577282791056	5116.297518344346	5471.432334468353	7246.442240467796	1.0269493399975398	0.7222524353573117	1.344114377879839	1.0529068639761336	0.7236211031457249	0.6051276294554423	0.5905763326024643	0.7060426825418348	0.7550508446632072	1.0	12.823057138846979	-7.776353442315643	7.551442371106704	0.7013683644237246	1.0364791074284037	0.4175288765147487	0.1754282416599811	0.14044975294049927	41.107387510335485	0.054113927924441564	0.06370139388558088	1.6735803101029867e-08	7.776353442315643	0.335110743004679	
HGYIGEFEIIDDHR	ddPTM_K562_Methotrexat_30min_R1	4	HGYIGEFEIIDDHR	14	0	I3L3P7;I3L246;H3BN98;P62244	I3L3P7	RPS15A	40S ribosomal protein S15a	0	;;;	135.58	3.8479e-05	337902000.0	34132.1	28608.1	36550.3	33202.7	27328.1	26040.799999999996	22864.1	26797.0	27837.8	26360.9	False	True	32631.69375262257	33335.10227044388	28878.89151940295	30291.87084151732	30922.22415499953	31072.816050366513	27991.95644566397	25854.534321315812	26543.626754115074	21586.685567656325	1.5116583622969502	1.5442436573213627	1.3378103567076853	1.403266413761273	1.432467437304539	1.4394435844715046	1.2967232212621267	1.1977074590855241	1.2296295635994168	1.0	14.397854127672236	-9.636529078692451	0.3912724277636369	0.9738558686773788	1.5031587444990524	0.8662310318480624	0.05707551985112483	0.4209178851705299	0.18995286001002717	0.08468806320926002	0.059129077826723345	2.3092498352326895e-10	9.636529078692451	0.5293028758216736	
HHAPS(ph)PPRPEHASWAR	ddPTM_K562_Methotrexat_30min_R1	1	HHAPSPPRPEHASWAR	16	1	E9PJK5;Q8N612-3;Q8N612;Q8N612-2	E9PJK5	FAM160A2	FTS and Hook-interacting protein	1	HHAPS(0.999)PPRPEHAS(0.001)WAR	77.633	0.021745	13158000.0	780.14	727.67	829.11	828.66	579.5	687.79	699.75	779.44	644.21	1037.6	True	False	745.84597971326	847.9050992248312	655.0911414585427	756.012664377649	655.7144074349201	820.6956833615556	856.6867500952749	752.0266534092025	614.2608177107558	849.6805854504287	0.8777957181614026	0.997910407444868	0.7709851827569637	0.8897610199918539	0.7717187124939613	0.9658872962555596	1.0082456452045825	0.8850698324600904	0.7229314500402839	1.0	9.730776790564093	-8.308506149631128	24.995679832861892	0.9149823514474522	0.8657312691219968	0.07432278249377611	0.09607558053794311	1429.3724320437873	759089.9560759834	0.03483574160436681	0.03071221450576008	4.914664209614116e-09	8.308506149631128	-0.049251082325455386	
HHCAADTPAS(ph)WMHARHGSSR	ddPTM_K562_Methotrexat_30min_R1	1	HHCAADTPASWMHARHGSSR	20	1	Q9UIW2	Q9UIW2	PLXNA1	Plexin-A1	1	HHCAADT(0.003)PAS(0.994)WMHARHGS(0.002)S(0.001)R	74.611	0.019375	23677000.0	0.0	65.929	179.13	0.0	0.0	162.83	118.56	66.753	0.0	0.0	True	False	0.0	76.8226466486098	141.533060956289	0.0	0.0	194.29459300333255	145.15009802257347	64.40525915403943	0.0	0.0											0.0														
HHGDVMDLQFFDQER	ddPTM_K562_Methotrexat_30min_R1	1	HHGDVMDLQFFDQER	15	0	B4E301;F5H0E3;B4DVD1;Q8NFH3-2;Q8NFH3	B4E301	NUP43	Nucleoporin Nup43	0		85.837	0.008760700000000001	9069300.0	553.64	350.03	561.02	458.89	360.63	381.67	505.95	617.79	512.46	483.34	False	True	529.3026485098179	407.8665080072943	443.2695687919235	418.65982617268725	408.0591660970754	455.42232580962894	619.4221667891449	596.0619755332946	488.6358464538798	395.8024423396395	1.3372900009940347	1.0304800182544165	1.1199263101351766	1.0577494764760287	1.030966771415014	1.1506304082348975	1.564978131836833	1.5059583058909263	1.2345447985754965	1.0	8.628636704485604	-8.596876763958639	9.35324527624427	1.3680737393697944	1.1059605513835868	0.2537474736521742	0.16687227699661103	0.35708622151629815	41.84009026216471	0.061633686692376635	0.04769280628849215	2.530015815608026e-09	8.596876763958639	-0.26211318798620753	
HHPSS(ph)PLPGSK	ddPTM_K562_Methotrexat_30min_R1	1	HHPSSPLPGSK	11	0	A0A590UJ53;Q9P2N6-6;Q9P2N6-2;Q9P2N6-5;Q9P2N6-4;Q9P2N6-3;Q9P2N6	A0A590UJ53	KANSL3	KAT8 regulatory NSL complex subunit 3	1	HHPS(0.044)S(0.956)PLPGSK	89.26	0.012865999999999999	5927700.0	5590.5	4324.3	7233.6	6638.2	4472.5	3871.5	3464.9	4223.6	4902.6	5337.0	True	False	5344.74831387569	5038.817074467739	5715.366212992869	6056.239312470386	5060.712143662948	4619.612582524114	4241.99202630242	4075.0535940407285	4674.679196083191	4370.417583412621	1.2229376740019124	1.15293721441904	1.3077391585382674	1.3857347031222125	1.1579470490120336	1.0570185787411441	0.9706148086174592	0.9324174443895453	1.0696184304734075	1.0	12.093555417188071	-8.211995981282902	2.5570425339868432	0.9919830651855751	1.261928388624556	0.7720940910849393	0.06701671471713239	0.14314150471799048	1.8445822969576404	0.026649609204687872	0.02549559766182795	6.137676845997837e-09	8.211995981282902	0.2699453234389809	
HHQTPDPHQEENHS(ph)PEVIGTWSLR	ddPTM_K562_Methotrexat_30min_R1	4	HHQTPDPHQEENHSPEVIGTWSLR	24	0	Q9BXL5	Q9BXL5	HEMGN	Hemogen	1	HHQT(0.041)PDPHQEENHS(0.959)PEVIGTWSLR;HHQT(0.075)PDPHQEENHS(0.922)PEVIGT(0.002)WSLR;HHQT(0.042)PDPHQEENHS(0.957)PEVIGTWSLR;HHQT(0.024)PDPHQEENHS(0.972)PEVIGT(0.004)WS(0.001)LR	61.693999999999996	0.0029175	324008000.0	6777.9	4729.01	5688.17	7700.3	4676.37	4136.82	3956.92	4531.379999999999	5427.530000000001	5208.34	True	False	6479.951631628304	5510.398523073946	4494.3008504423315	7025.226654487016	5291.394622081861	4936.201917509342	4844.360035994277	4372.008796989363	5175.205314958879	4265.059156153509	1.519311079725403	1.2919864230074503	1.053748772501333	1.6471580808794208	1.2406380376805755	1.1573583710761728	1.135824817108332	1.025075769624801	1.2133959050702112	1.0	12.058350036451243	-8.173380400255521	3.2757548661099825	1.10664048775742	1.355986349581191	0.39499671456133545	0.1559587630703009	0.29147481202521824	6.018547773457555	0.054701078202914664	0.05398650165232354	6.708410032238617e-09	8.173380400255521	0.24934586182377094	
HIDFSLR	ddPTM_K562_Methotrexat_30min_R1	1	HIDFSLR	7	0	P46781	P46781	RPS9	40S ribosomal protein S9	0		177.71	1.4057999999999999e-15	27395000.0	616.86	583.12	754.56	634.14	621.26	621.17	563.08	625.33	786.55	965.55	False	True	589.7435730073089	679.4706686547248	596.1881676725138	578.5459307658658	702.9665794012394	741.2023112195541	689.3650235707717	603.3367894595822	749.9834621790955	790.6795386292029	0.7458692734476782	0.8593502619692419	0.7540199771782665	0.7317072246094644	0.8890663600830863	0.937424424191592	0.8718639978542007	0.7630610885739931	0.9485302521921055	1.0	9.62694928054326	-7.777080511583841	24.659647762617492	0.8901094316531377	0.7775864693603245	0.4667308877809869	0.06674915048335978	209.2398215869592	329883.88984234026	0.02075766437584332	0.023619878209186585	1.6707808482707442e-08	7.777080511583841	-0.11252296229281322	
HIEPELAGRDS(ph)PIR	ddPTM_K562_Methotrexat_30min_R1	2	HIEPELAGRDSPIR	14	1	P86791;P86790	P86791	CCZ1;CCZ1B	Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B	1	HIEPELAGRDS(1)PIR;HIEPELAGRDS(1)PIR	121.03	0.00075823	63808000.0	2432.6	2270.99	2570.9	2189.76	2286.4	1959.8400000000001	1837.28	2247.45	2372.2400000000002	2347.7	True	False	2325.6658167129967	2646.2324972701895	2031.3032234272512	1997.7871406217266	2587.101675857121	2338.5513428216623	2249.336809167626	2168.405909633213	2261.9550801852874	1922.5087803218676	1.2097036125492402	1.3764475483056862	1.056589828987501	1.0391563154719408	1.3456904344665654	1.216406066260015	1.1700007990554098	1.1279042945490096	1.1765642390494515	1.0	10.908774471820783	-15.99999999923184	0.16849898849710787	0.24835631251898127	1.237616211371939	0.26091616216601765	0.10094816799562445	198.4777617443533	1.864220879270563	49.648620309982554	0.39491262458710963	1.0000000017687553e-16	15.99999999923184	0.9892598988529576	
HIEPELAGRDS(ph)PIRAEMPGNLQHYGR	ddPTM_K562_Methotrexat_30min_R1	3	HIEPELAGRDSPIRAEMPGNLQHYGR	26	2	P86791;P86790	P86791	CCZ1;CCZ1B	Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B	1	HIEPELAGRDS(1)PIRAEMPGNLQHYGR;HIEPELAGRDS(0.998)PIRAEMPGNLQHY(0.002)GR;HIEPELAGRDS(1)PIRAEMPGNLQHYGR	58.324	0.0021421	272797000.0	3795.21	3066.6000000000004	3612.2	3554.11	3044.7	3018.61	2907.74	3720.9100000000003	3900.46	3960.28	True	False	3628.3771126561437	3573.3035267124746	2854.0485836337148	3242.526694411757	3445.131417285763	3601.913660786032	3559.8747134291307	3590.0434862681363	3719.1284659475846	3243.0349161021813	1.1188214763401645	1.1018393631750485	0.8800548429074606	0.9998432882458648	1.0623170907535224	1.110661387856776	1.0976985464306257	1.1070011822700405	1.1468049411005485	1.0	11.663128841300793	-7.993942536682294	4.3034762670634255	1.0987636584156402	1.0206554309392457	0.16651366415324043	0.0698181861880619	0.3490481402852774	15.757404303873761	0.023994038625290988	0.026082541084902936	1.0140455494646886e-08	7.993942536682294	-0.07810822747639445	
HIISATSLST(ph)SPTELGSR	ddPTM_K562_Methotrexat_30min_R1	1	HIISATSLSTSPTELGSR	18	0	Q5JSZ5-5;Q5JSZ5;A0A1W2PQP5	Q5JSZ5-5	PRRC2B	Protein PRRC2B	1	HIISATSLS(0.003)T(0.528)S(0.413)PT(0.055)ELGS(0.001)R	85.177	0.013887	25011000.0	2113.8	1691.4	2172.3	2194.1	1779.2	1744.1	1516.4	1617.9	1706.0	2093.8	True	False	2020.8798829926548	1970.8751011157249	1716.3639162359564	2001.7466595600115	2013.1959856914746	2081.122641141756	1856.491300956734	1560.9975399655511	1626.688432366076	1714.5925306631723	1.178635650658653	1.1494714142685711	1.0010331233462793	1.1674766008608315	1.1741541793097676	1.2137709711920983	1.0827594706939951	0.9104189549698939	0.948731785118009	1.0	10.743650048327137	-9.104281434249593	4.344528310852933	0.9489659695656614	1.1434731305538037	0.6975112595127241	0.05703200063927089	0.13515141643812048	4.262885135003949	0.02980889508953718	0.016784606126208208	7.865359285375202e-10	9.104281434249593	0.19450716098814236	
HIISATSLSTS(ph)PTELGSR	ddPTM_K562_Methotrexat_30min_R1	3	HIISATSLSTSPTELGSR	18	0	Q5JSZ5-5;Q5JSZ5;A0A1W2PQP5	Q5JSZ5-5	PRRC2B	Protein PRRC2B	1	HIISATSLST(0.054)S(0.922)PT(0.024)ELGSR;HIISATSLST(0.392)S(0.608)PTELGSR;HIISATSLST(0.033)S(0.965)PT(0.003)ELGSR	205.55	7.3652e-21	136913000.0	8268.3	6821.2	8130.5	8785.6	6605.6	6396.9	6266.9	8039.7	7852.9	8734.7	True	False	7904.835432182873	7948.287359424491	6424.019159856573	8015.380088523965	7474.3521824885365	7633.01039110126	7672.411853050486	7756.93919405466	7487.820393040766	7152.761189026457	1.105144604060069	1.111219450695279	0.8981173829362713	1.120599426808896	1.0449603985039309	1.0671417917337414	1.0726503584128126	1.0844678004845338	1.046843337161647	1.0	12.804284559382268														
HIKEEPLS(ph)EEEPCTSTAIASPEK	ddPTM_K562_Methotrexat_30min_R1	2	HIKEEPLSEEEPCTSTAIASPEK	23	1	Q9Y2X3	Q9Y2X3	NOP58	Nucleolar protein 58	1	HIKEEPLS(0.986)EEEPCT(0.009)S(0.003)T(0.002)AIASPEK;HIKEEPLS(0.527)EEEPCT(0.167)S(0.223)T(0.081)AIAS(0.002)PEK	65.165	0.004861600000000001	66781000.0	7306.1	4990.200000000001	11717.7	7989.3	4501.8	3791.0	3256.2999999999997	4969.9	5381.299999999999	7128.799999999999	True	False	6984.932592077132	5814.745731103044	9258.314901845077	7288.890473188461	5093.865607231276	4523.5570968226575	3986.6081662525808	4795.1058000338635	5131.124537568326	5837.705240515624	1.1965202599815021	0.9960670317416451	1.5859510750199033	1.248588301889778	0.8725801316377106	0.7748861770936396	0.6829067248178597	0.8214025207635062	0.8789625933760081	1.0	12.511185652271354	-7.787074948849043	4.76546638958686	0.8138254876290869	1.2645345576528182	0.6378267457436613	0.15430756920124664	0.12189362438435465	6.730647622056334	0.04935517085652706	0.05881579786434709	1.6327701464707093e-08	7.787074948849043	0.4507090700237313	
HIMGQNVADYMR	ddPTM_K562_Methotrexat_30min_R1	2	HIMGQNVADYMR	12	0	A0A2R8Y6J3;P46777	A0A2R8Y6J3	RPL5	60S ribosomal protein L5	0	;	85.522	0.009648899999999998	26529000.0	4934.8	4306.1	5298.7	5304.4	5249.1	5128.799999999999	4841.6	5342.7	5707.7	5974.1	False	True	4717.872100762679	5017.609833814844	4186.575281019866	4839.3714876122895	5939.448655852698	6119.868013237684	5927.452046104007	5154.794212728814	5442.350272811163	4892.132599787398	0.9643794407714353	1.025648780254423	0.8557771474145665	0.989215109954828	1.2140816984623053	1.2509611888900232	1.2116294734859807	1.0536906160214936	1.1124699017863244	1.0	12.256247792873891	-7.65706719354487	5.7761985398468765	1.1516875035998788	0.9515703965392633	0.5434531334223816	0.081650410168981	0.15954874957980011	7.628127449709347	0.025301362796752016	0.032716931138282966	2.2025856551593465e-08	7.65706719354487	-0.20011710706061547	
HIQQY(ph)HMEDSEIKGLQAAS(ph)S	ddPTM_K562_Methotrexat_30min_R1	1	HIQQYHMEDSEIKGLQAASS	20	1	F8W1N0	F8W1N0	OS9		2	HIQQY(0.677)HMEDS(0.008)EIKGLQAAS(0.681)S(0.633)	48.907	0.027985000000000003	13034000.0	1547.5	1255.3	1662.1	1644.5	1264.7	1213.6	1402.2	1407.2	1547.9	1791.6	True	False	1479.4737529241809	1462.7169885482847	1313.247923940424	1500.3292382509642	1431.0302175719476	1448.111024189918	1716.6790439208205	1357.7079783914476	1475.9384668578236	1467.1238790410446	1.0084177444451443	0.996996238316535	0.8951172717594928	1.0226329621406092	0.9753983545733786	0.9870407297415444	1.1700982230913537	0.9254214983392443	1.006008073307716	1.0	10.518774977168091	-8.55025659831344	24.998514823894187	1.0276530831749837	0.9786435332113674	0.10153282989248213	0.0649004446225405	506.8464360497569	462793.2320007338	0.02473820685066656	0.01916246185484088	2.8167182112790155e-09	8.55025659831344	-0.04900954996361628	
HIQQYHMEDSEIKGLQAAS(ph)S(ph)	ddPTM_K562_Methotrexat_30min_R1	1	HIQQYHMEDSEIKGLQAASS	20	1	F8W1N0	F8W1N0	OS9		2	HIQQY(0.111)HMEDS(0.004)EIKGLQAAS(0.946)S(0.939)	60.949	0.028044	33248000.0	2813.9	2917.6	2883.7	3074.1	2292.1	2505.1	2388.6	2730.3	2860.4	2795.9	True	False	2690.2043252687245	3399.683809279436	2278.4507780921713	2804.598425848153	2593.5513257663165	2989.175120878512	2924.3043533798823	2634.273801451228	2727.4206283352414	2289.5354171750682	1.175000091760109	1.4848793269483984	0.995158564047647	1.2249639838760795	1.1327849773847818	1.3055815159944941	1.2772479217587385	1.1505713262568846	1.191255050205974	1.0	11.160839167117366	-10.41075622230919	1.138915484328387	1.0004101920565585	1.224987373743759	0.2299135808607491	0.12036309976547	2.2145593483352357	4.435768866899534	0.11307701917328818	0.035005611967535946	3.883683032785742e-11	10.41075622230919	0.22457718168720064	
HITIFSPEGR	ddPTM_K562_Methotrexat_30min_R1	2	HITIFSPEGR	10	0	G3V5Z7;P60900;G3V4S5;G3V2S7;G3V3U4;G3V3I1;G3V295	G3V5Z7	PSMA6	Proteasome subunit alpha type;Proteasome subunit alpha type-6	0	;	90.05	0.021339	22110000.0	6741.2	5426.200000000001	6419.3	6466.8	5249.3	5318.8	4967.7	6356.3	5833.799999999999	6820.2	False	True	6444.8649196849665	6322.787320370196	5071.976654924949	5899.865684354718	5939.6749593582845	6346.582824210063	6081.833181062231	6132.745326214861	5562.587911334822	5584.995690910763	1.1539605894725375	1.1321024527664618	0.9081433425596511	1.0563778399966155	1.063505737170888	1.136363065514757	1.0889593327636833	1.0980752118028536	0.9959878609015923	1.0	12.447340452263413	-9.770393550531397	24.539701780386693	0.9979938404448533	1.076597149633256	0.20071434429530066	0.06497459412485149	304.76256547654964	835189.2955602076	0.06275197098795673	0.017180439840698204	1.6967054289989577e-10	9.770393550531397	0.07860330918840275	
HIYYITGETK	ddPTM_K562_Methotrexat_30min_R1	2	HIYYITGETK	10	0	P07900;P07900-2;Q58FG0	P07900	HSP90AA1;HSP90AA5P	Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5	0	;	112.36	0.003676	14952700.0	7943.1	5825.4	11152.0	9070.5	6311.5	6005.1	5487.6	7605.0	7773.700000000001	10229.7	False	True	7593.9308347993865	6787.9483351303925	8811.347601097166	8275.303347859755	7141.572877524584	7165.500586159261	6718.333990457773	7337.527839444966	7412.302383753905	8377.002202180265	0.906521289062444	0.8103075743926278	1.0518497415225527	0.98785975557055	0.8525213083584796	0.8553776653292882	0.8019974005389668	0.8759133234482429	0.884839493276571	1.0	13.032218337439625	-7.780380896594083	24.994279941196687	0.8672617860162333	0.9379837538883078	0.12742961357921745	0.07440792558098389	449.2546113557488	592811.0743550787	0.023738344419270113	0.026958944625642786	1.658132010118491e-08	7.780380896594083	0.07072196787207452	
HKMS(ph)PPPSGFGER	ddPTM_K562_Methotrexat_30min_R1	2	HKMSPPPSGFGER	13	1	A0A087WZ13;E9PAU2;Q8IY67-2;K7EQG2	A0A087WZ13	RAVER1	Ribonucleoprotein PTB-binding 1	1	HKMS(1)PPPSGFGER;HKMS(0.994)PPPS(0.006)GFGER	75.08800000000001	0.019244	33963000.0	2035.5700000000002	1421.02	2390.6000000000004	2560.0	1715.63	1485.0	1308.27	1766.04	1899.03	2307.7	True	False	1946.0887801226963	1655.8194017899184	1888.8457294819673	2335.568774656409	1941.2654164410208	1771.9552331262591	1601.6828503710537	1703.9273721989982	1810.7445097984455	1889.7531679297933	1.029811095517103	0.8762093536288937	0.9995198111249523	1.2359120832775226	1.0272587179031738	0.9376649094693247	0.8475619343057814	0.9016666309207114	0.9581910169686864	1.0	10.883982092304723	-8.294327690933729	4.805619146120598	0.9163376344615702	1.0346683414167233	0.2501449047488492	0.08985949863945204	0.299757500345657	17.803015342241537	0.03475376020079448	0.03139546774471891	5.077761624532911e-09	8.294327690933729	0.11833070695515302	
HKS(ph)DNETNLQQQVVWGNR	ddPTM_K562_Methotrexat_30min_R1	2	HKSDNETNLQQQVVWGNR	18	1	A0A0U1RR27;Q7Z401;Q7Z401-2	A0A0U1RR27	DENND4A	C-myc promoter-binding protein	1	HKS(1)DNETNLQQQVVWGNR;HKS(0.998)DNET(0.002)NLQQQVVWGNR	110.22	0.00053397	40437000.0	2783.3	2172.12	4203.5	3417.5	2192.83	2215.7599999999998	1838.46	2123.7	2283.68	2685.8	True	False	2660.9494646293183	2531.025910272843	3321.2427942263225	3117.893081011048	2481.2255807687943	2643.924260842988	2250.7814542052997	2049.0082672753806	2177.512215255428	2199.3755940658825	1.209865869117037	1.1507929419157799	1.5100844090419758	1.4176264797260685	1.1281500019657256	1.2021249430868193	1.023372933789988	0.9316318107756553	0.9900592791565734	1.0	11.102878283318544	-8.535649782171767	1.3722056268203138	0.9659529969938321	1.3097580048340054	0.6396547172820497	0.10729173258341194	0.2880197360270622	1.1033477326133558	0.06244368197744429	0.04472076080667922	2.913065285496702e-09	8.535649782171767	0.3438050078401733	
HLAES(ph)FGLKRDEIGGMT(ph)DGMQLFDR	ddPTM_K562_Methotrexat_30min_R1	1	HLAESFGLKRDEIGGMTDGMQLFDR	25	2	Q9UNE0;Q9UNE0-2	Q9UNE0	EDAR	Tumor necrosis factor receptor superfamily member EDAR	2	HLAES(1)FGLKRDEIGGMT(1)DGMQLFDR	45.011	0.025914999999999997	0.0	602.42	487.22	489.7	618.21	610.42	632.74	682.96	793.12	703.67	707.78	True	False	575.9383381173404	567.7248236760101	386.91866214645665	564.012489132945	690.7009293984881	755.0080499719255	836.1311651948109	765.2255200553046	670.9565352890016	579.5941834715728	0.9936924050335787	0.9795212579179639	0.6675682282195189	0.9731161996048705	1.191697482644535	1.3026494597473064	1.4426148312715432	1.3202781219643422	1.1576315884852386	1.0	9.178899306548754	-7.763721942149095	3.1072706714563005	1.2737756485645515	0.8814541814109618	0.5842770350319884	0.13791575662203331	0.16366156221328002	3.266556100916456	0.04444280306829765	0.055259647406374415	1.7229713575397145e-08	7.763721942149095	-0.39232146715358973	
HLAPPPLLS(ph)PLLPSIKPTVR	ddPTM_K562_Methotrexat_30min_R1	2	HLAPPPLLSPLLPSIKPTVR	20	1	Q14676;Q14676-3;Q14676-2;H0Y6Z8	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	1	HLAPPPLLS(1)PLLPSIKPTVR;HLAPPPLLS(1)PLLPSIKPTVR	88.62700000000001	0.0015744	9293300.0	8510.8	6602.0	12433.2	10216.2	6484.6	5800.9	5122.5	8510.3	7767.2	9991.0	True	False	8136.6754225441755	7692.868285187428	9823.641229731104	9320.561607673757	7337.438561609117	6921.841826156306	6271.3510215977785	8210.987925316043	7406.10456733516	8181.533085230556	0.9945172057340502	0.94027222099422	1.200709100286462	1.1392194483084588	0.8968292965599304	0.8460323699786454	0.7665251678709127	1.003600161458573	0.905222100819318	1.0	12.9981554905701	-7.777214686418871	24.613118799523004	0.8935391874342955	1.0689382158510157	0.43054861082871276	0.09294113681587342	193.95973008929218	302620.48927270476	0.03066386083836245	0.03488925651414336	1.6702647419695906e-08	7.777214686418871	0.17539902841672017	
HLEFSHDQYR	ddPTM_K562_Methotrexat_30min_R1	2	HLEFSHDQYR	10	0	Q9NR45	Q9NR45	NANS	Sialic acid synthase	0	;	198.61	3.2378e-08	43207000.0	2480.8	1274.23	1984.8500000000001	2391.7	1417.65	1411.3400000000001	1664.74	2287.38	2147.12	2747.9	False	True	2371.747002426046	1484.7748492933015	1568.2571095801384	2182.0233743538015	1604.0958234687055	1684.0614806198084	2038.1003220487416	2206.931548900675	2047.3008598486795	2250.2286823045783	1.054002653631192	0.6598328698631043	0.6969323259954199	0.969689610443982	0.7128590245440592	0.7483957047845785	0.9057303100240528	0.9807587852095279	0.9098190223723974	1.0	11.135855909243057	-8.932306287411748	4.928450918847487	0.9566171561579111	0.7989058857938115	0.2660116418481976	0.11779480764355421	0.27244225229049446	12.701535471751788	0.050422045649829016	0.03313605935119201	1.1686748890418185e-09	8.932306287411748	-0.1577112703640996	
HLEINPDHPIVETLR	ddPTM_K562_Methotrexat_30min_R1	4	HLEINPDHPIVETLR	15	0	P08238	P08238	HSP90AB1	Heat shock protein HSP 90-beta	0	;;;	160.87	5.510699999999999e-09	399586000.0	11657.099999999999	9488.2	12770.3	13046.599999999999	10879.4	9099.1	9352.199999999999	11576.199999999999	11670.800000000001	13039.0	False	True	11144.667841817429	11055.963778175616	10089.988546475177	11902.82483415324	12310.231793351977	10857.372297467433	11449.668916385895	11169.058484547373	11128.22705536811	10677.51074950668	1.0437514981974925	1.0354439379690084	0.9449757329386301	1.1147565301868856	1.1529121423662094	1.0168448950490696	1.0723163090156467	1.0460357986587279	1.0422117398366706	1.0	13.382287729953028	-7.273314223826158	24.995568012658964	1.0676392218660216	1.0107957397290528	0.2102130001090876	0.048793106841131445	1167.5996274493116	2457694.3419051045	0.014130088346091814	0.02116012031601052	5.329491528029108e-08	7.273314223826158	-0.05684348213696877	
HLEINPDHSIIETLR	ddPTM_K562_Methotrexat_30min_R1	4	HLEINPDHSIIETLR	15	0	P07900;P07900-2	P07900	HSP90AA1	Heat shock protein HSP 90-alpha	0	;;;	150.9	9.1961e-10	138936000.0	9375.199999999999	7959.4	9716.099999999999	10137.7	7755.9	6598.6	7473.700000000001	9086.900000000001	9048.5	9302.6	False	True	8963.07743354751	9274.555563332447	7676.823388362639	9248.943580794641	8775.936794865398	7873.686061486155	9149.867472936123	8767.308576496049	8627.837210002597	7617.808995962944	1.1765951913860653	1.2174833430777137	1.0077468984101556	1.2141212237923156	1.1520289888491826	1.0335893254423698	1.2011153702836461	1.1508963510560952	1.1325877577890069	1.0	12.895160399810434	-10.18464951372789	6.0145259512767835	1.0000000749568096	1.1428491451382263	0.2887932056511282	0.06747096853792202	9.05251314234604	294.7547808131551	0.06339482591390733	0.016451321586774217	6.536578577280282e-11	10.18464951372789	0.14284907018141668	
HLFS(ph)STENLAAGSWKEPAEGGGLSSDR	ddPTM_K562_Methotrexat_30min_R1	1	HLFSSTENLAAGSWKEPAEGGGLSSDR	27	1	Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3	Q6WKZ4	RAB11FIP1	Rab11 family-interacting protein 1	1	HLFS(0.362)S(0.319)T(0.319)ENLAAGSWKEPAEGGGLSSDR	65.753	0.0007137000000000001	29027000.0	2756.0	2117.6	4185.5	3156.7	1933.6	2140.8	2038.2	2290.6	2537.2	2918.8	True	False	2634.8495399412222	2467.497406954392	3307.020748241766	2879.9570120929257	2187.902292003729	2554.4793017351494	2495.3182337180256	2210.0382996755607	2419.24612579086	2390.1770362497223	1.1023658498850781	1.0323492233135954	1.3835882020817194	1.204913681461724	0.9153724844736314	1.068740625900759	1.0439888744112753	0.9246337263549289	1.0121618980938534	1.0	11.222901764734402	-7.749745366480076	24.992774689420937	0.9966028018771763	1.1846849232626375	0.48289817434014537	0.09457018019825261	205.03347681527893	438201.4360828979	0.029420781637851764	0.03766011543041865	1.7793223482640208e-08	7.749745366480076	0.1880821213854612	
HLFSS(ph)TENLAAGSWK	ddPTM_K562_Methotrexat_30min_R1	1	HLFSSTENLAAGSWK	15	0	Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3	Q6WKZ4	RAB11FIP1	Rab11 family-interacting protein 1	1	HLFS(0.144)S(0.712)T(0.144)ENLAAGSWK	107.51	0.0011272	7447800.0	3641.6	2780.9	4089.2	3148.9	2755.6	2255.3	1984.6	3083.7	3303.5	3930.7	True	False	3481.519624328722	3240.396457782146	3230.9328022244026	2872.8408259826438	3118.0096999614593	2691.104806242189	2429.6970692948653	2975.244523142203	3149.921006050019	3218.8121407382423	1.0816162833069924	1.0067056777780619	1.003765569705904	0.8925158413636873	0.9686833414410871	0.8360552553480111	0.7548427690277099	0.9243299680297041	0.9785973422256252	1.0	11.652312664045546	-6.928403431145623	1.1172326055194375	0.8923159233814515	1.0802477402684962	0.39355037918351743	0.07045391519102268	0.7036982314997149	1.4270841083579842	0.025404723161783105	0.12055667067717153	1.1792247041458084e-07	6.928403431145623	0.18793181688704474	
HLFSS(ph)TENLAAGSWKEPAEGGGLSSDR	ddPTM_K562_Methotrexat_30min_R1	1	HLFSSTENLAAGSWKEPAEGGGLSSDR	27	1	Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3	Q6WKZ4	RAB11FIP1	Rab11 family-interacting protein 1	1	HLFS(0.079)S(0.459)T(0.459)ENLAAGS(0.004)WKEPAEGGGLSSDR	74.278	0.00019169999999999997	61286000.0	653.74	384.55	762.54	583.19	447.67	365.17	272.05	464.04	448.22	718.48	True	False	625.002372366174	448.0903512676199	602.4932747256668	532.0626381608874	506.54645172802515	435.73393433044873	333.06413771121026	447.7194501796241	427.3823500323111	588.356309786453	1.062285492600601	0.7615969163826196	1.024027897218175	0.9043204420702182	0.8609518472095231	0.7405953281755415	0.5660925737876383	0.7609665142235429	0.7264005551116325	1.0	9.200546308572317	-8.082922513329711	2.6936881989315915	0.7317567917820555	0.9305232637842638	0.3041583313308618	0.12475049936945018	0.3122851541700342	4.442713188805349	0.042284767828021694	0.04373486296819561	8.261853441292604e-09	8.082922513329711	0.1987664720022082	
HLFSST(ph)ENLAAGSWKEPAEGGGLSSDR	ddPTM_K562_Methotrexat_30min_R1	1	HLFSSTENLAAGSWKEPAEGGGLSSDR	27	1	Q6WKZ4;E7EX40;Q6WKZ4-2;Q6WKZ4-3	Q6WKZ4	RAB11FIP1	Rab11 family-interacting protein 1	1	HLFS(0.037)S(0.165)T(0.791)ENLAAGS(0.007)WKEPAEGGGLSSDR	65.21300000000001	0.0047363	12736000.0	394.71	268.46	620.02	455.25	362.51	353.73	248.86	376.25	274.87	302.67	True	False	377.35902101240936	312.81845196022687	489.886275074629	415.3389393212227	410.1864190495822	422.0833162382166	304.67318989454833	363.01707423947005	262.091353695465	247.8535300677343	1.522508155963255	1.2621101336532858	1.976515222279671	1.6757434893411338	1.654954920099322	1.7029546285778867	1.2292469258407823	1.4646435503269348	1.0574445061316646	1.0	7.953343996393926	-9.454402691746406	0.998123967314308	1.0012472863133246	1.6307333698769209	0.5618405938416544	0.19636917187250008	0.41003406544712584	0.7459948681462404	0.1848374634835868	0.06927571585379962	3.512346135155286e-10	9.454402691746406	0.6294860835635963	
HLKT(ph)RT(ph)TS(ph)HGRVGATAAVYS(ph)AAILEY(ph)LTAEV	ddPTM_K562_Methotrexat_30min_R1	1	HLKTRTTSHGRVGATAAVYSAAILEYLTAEV	31	3	Q71UI9-5;E5RJU1	Q71UI9-5	H2AFV	Histone H2A.V	5	HLKT(0.671)RT(0.673)T(0.673)S(0.954)HGRVGAT(0.031)AAVY(0.306)S(0.69)AAILEY(0.779)LT(0.222)AEV	41.562	0.01516	76235000.0	2642.6	2643.4	3422.4	2931.0	2896.0	2993.9	2869.2	3146.6	3151.6	2994.0	True	False	2526.4344681598955	3080.1769198825286	2704.0850098632473	2674.043780671068	3276.874760882707	3572.4288030011508	3512.69113736815	3035.932294490141	3005.082803895032	2451.757587546821	1.0304585090273115	1.2563138115805697	1.1029169537796353	1.090664017622828	1.336541090981789	1.457088914967181	1.43272367350268	1.2382677267567197	1.2256851244832312	1.0	11.259600627258171	-7.763615350184713	24.985609649310874	1.30995001135234	1.128592175173354	0.24902693987189384	0.1318252879533888	72.27588185443003	829911.5684144472	0.04008263237646659	0.047690272580611044	1.723394290477922e-08	7.763615350184713	-0.18135783617898582	
HLLNS(ph)PTDPFNR	ddPTM_K562_Methotrexat_30min_R1	3	HLLNSPTDPFNR	12	0	O95155;O95155-4;O95155-2;O95155-3	O95155	UBE4B	Ubiquitin conjugation factor E4 B	1	HLLNS(1)PTDPFNR;HLLNS(0.999)PT(0.001)DPFNR;HLLNS(0.997)PT(0.003)DPFNR	104.09	0.0033038000000000004	26258300.0	12065.900000000001	11473.300000000001	14082.0	13574.4	11800.1	10504.199999999999	9870.4	11561.0	11607.800000000001	11756.4	True	False	11535.497483300716	13369.06781224491	11126.380641916281	12384.353427615606	13352.019981316304	12533.987986400578	12084.088457506816	11154.39307716282	11068.155911617197	9627.202038154799	1.198219112633443	1.388676352616289	1.1557231891280453	1.286391765596441	1.386905554531753	1.301934657310143	1.2552025406358789	1.158632906316437	1.1496752501663068	1.0	13.232900851972472	-9.799858211685827	1.0680351722005361	1.0080120749033328	1.2896233003611062	0.6196884571254238	0.07023952638928488	0.31037349733463987	0.755478974992647	0.06594904986354036	0.022166679746384373	1.5854107123247255e-10	9.799858211685827	0.2816112254577734	
HLLS(ph)PQLVQYQCGDSGK	ddPTM_K562_Methotrexat_30min_R1	3	HLLSPQLVQYQCGDSGK	17	0	Q9P209	Q9P209	CEP72	Centrosomal protein of 72 kDa	1	HLLS(1)PQLVQYQCGDSGK;HLLS(1)PQLVQYQCGDSGK;HLLS(1)PQLVQYQCGDSGK	159.04	3.1522e-41	22345500.0	6241.299999999999	4334.63	7371.5	6068.43	4095.29	4228.89	3711.9199999999996	4837.95	4987.08	6302.4	True	False	5966.939925121605	5050.853931387761	5824.322887507869	5536.420163745388	4633.892416952808	5046.063141963169	4544.412549358556	4667.796556323836	4755.231739322513	5160.974288495354	1.156165404354538	0.9786628743039723	1.1285316612584617	1.0727470927508713	0.8978716339049593	0.9777346020133562	0.880533847938128	0.9044409631586635	0.921382567226249	1.0	12.333427727926436	-7.753432165344649	24.672747932226745	0.925430010744556	1.0796797408780348	0.6529544487364576	0.054788268332067604	90.10786314927024	277648.8506997416	0.015405730329247339	0.019522247674881858	1.7642813149928274e-08	7.753432165344649	0.15424973013347876	
HLPLSFLSS(ph)PGQR	ddPTM_K562_Methotrexat_30min_R1	1	HLPLSFLSSPGQR	13	0	Q12772	Q12772	SREBF2	Sterol regulatory element-binding protein 2;Processed sterol regulatory element-binding protein 2	1	HLPLSFLS(0.231)S(0.769)PGQR	146.27	1.0742000000000001e-08	7531800.0	3879.8	3565.0	4214.3	4196.9	3271.2	3236.3	2727.7	3929.9	3174.2	3832.7	True	False	3709.2486375413487	4154.0556553609795	3329.776021817053	3828.9642931076105	3701.420137361708	3861.66917236802	3339.4561603928264	3791.683189511474	3026.632134827898	3138.560890377655	1.1818310260964935	1.3235542659365556	1.0609244612795736	1.219974512792352	1.1793367299993105	1.2303948552367754	1.064008721523003	1.2080961058095738	0.9643375548669731	1.0	11.615887483193957	-9.762741387253508	24.999268307513706	0.9821686794107796	1.182751862363502	0.5470028175441054	0.07328936611181251	25.184820990657812	483473.078609913	0.057281496405915705	0.017913156280041052	1.7268658962826041e-10	9.762741387253508	0.20058318295272248	
HLPS(ph)PPLTQEVDLHSIAGPPVPPR	ddPTM_K562_Methotrexat_30min_R1	4	HLPSPPLTQEVDLHSIAGPPVPPR	24	0	G5E9C8;Q07889	G5E9C8	SOS1	Son of sevenless homolog 1	1	HLPS(0.996)PPLT(0.004)QEVDLHSIAGPPVPPR;HLPS(0.958)PPLT(0.042)QEVDLHSIAGPPVPPR;HLPS(0.997)PPLT(0.003)QEVDLHSIAGPPVPPR;HLPS(0.994)PPLT(0.006)QEVDLHSIAGPPVPPR	140.84	8.9966e-17	125027000.0	11602.2	9163.1	11944.8	11888.800000000001	8738.1	8829.2	8116.599999999999	10063.3	10511.7	11878.5	True	False	11092.181180082016	10677.146528930765	9437.749715350195	10846.527362552788	9887.313310797368	10535.31794230193	9936.95416337736	9709.368035067258	10023.01336137308	9727.188544981605	1.1403275600949083	1.0976600771699092	0.9702443487866044	1.1150732107633161	1.0164615669857016	1.0830794420796181	1.0215648763695422	0.9981679691072154	1.0304121602067737	1.0	13.247807166922254	-3.000001719174099	0.7904559889039212	1.0304353589192843	28.415585266951492	0.39853429020464615	0.04215909431395627	482.2333316814143	1.741614536390193	0.014728479993150821	23625.475723128107	0.0009999960414631822	3.000001719174099	27.385149908032208	
HLPS(ph)PPTLDSIITEYLR	ddPTM_K562_Methotrexat_30min_R1	3	HLPSPPTLDSIITEYLR	17	0	Q9Y4B6-3;Q9Y4B6-2;Q9Y4B6	Q9Y4B6-3	VPRBP	Protein VPRBP	1	HLPS(1)PPTLDSIITEYLR;HLPS(1)PPTLDSIITEYLR;HLPS(0.996)PPT(0.004)LDSIITEYLR	162.81	1.0141999999999999e-08	267506230.0	11494.59	7411.33	8923.3	10894.17	8750.87	7702.589999999999	7804.12	12058.16	12386.320000000002	14502.840000000002	True	False	10989.301586833442	8635.926311429585	7050.421274109605	9939.095030390083	9901.762789629027	9191.006504461944	9554.392568993979	11634.067678169853	11810.482686743586	11876.23514060706	0.9253186263767188	0.7271602666321202	0.5936579387859122	0.8368893772072992	0.8337459365193146	0.7738990004531134	0.8044967496749649	0.9796090714296157	0.9944635271123377	1.0	13.535789942556324	-9.243347447266785	3.3657293651077165	0.996710008037019	0.7761287437604572	0.5801268850689059	0.08063212621628775	0.1843645021064918	4.3810672652276486	0.048566098885616846	0.023580009596974833	5.710216212281101e-10	9.243347447266785	-0.22058126427656188	
HLQLAIR	ddPTM_K562_Methotrexat_30min_R1	2	HLQLAIR	7	0	P16104;P20671;Q7L7L0;A0A0U1RR32;A0A3B3IS11;A0A494C189;A0A0U1RRH7;Q71UI9-2;Q71UI9;Q9BTM1-2;Q96QV6;C9J0D1;Q93077;Q6FI13;P0C0S8;P04908;Q16777;Q9BTM1;P0C0S5;Q96KK5;Q99878;Q71UI9-4;Q71UI9-3;H0YFX9;C9J386	P16104	H2AFX;HIST1H2AD;HIST3H2A;H2AFV;H2AFJ;HIST1H2AA;HIST1H2AC;HIST2H2AA3;HIST1H2AG;HIST1H2AB;HIST2H2AC;H2AFZ;HIST1H2AH;HIST1H2AJ	Histone H2AX;Histone H2A type 1-D;Histone H2A type 3;Histone H2A.V;Histone H2A.J;Histone H2A type 1-A;Histone H2A;Histone H2A type 1-C;Histone H2A type 2-A;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 2-C;Histone H2A.Z;Histone H2A type 1-H;Histone H2A type 1-J	0	;	170.31	4.8339e-16	10536700.0	3072.1000000000004	2434.3	2398.3	2925.9	2615.3999999999996	2044.74	2470.8	4025.5	4238.8	4907.2	False	True	2937.054162428675	2836.526698974821	1894.9296047086925	2669.3908897528077	2959.370942545799	2439.8570662509014	3024.9397958348054	3883.9208833248795	4041.7391131965533	4018.4585282597754	0.7308907487221448	0.7058743244522673	0.47155634216021297	0.6642823040179061	0.7364443160814148	0.607162435320068	0.7527612328364078	0.9665200862497992	1.005793411770473	1.0	11.972426477579413	-9.181002808217325	2.5630808052367637	1.002576071447952	0.6511559689489129	0.8153468069772865	0.07198167909599398	0.12546299895261023	1.5910693848875168	0.04553108412484682	0.021734883556438135	6.591696329346548e-10	9.181002808217325	-0.351420102499039	
HLRDFGEEHPFYDR	ddPTM_K562_Methotrexat_30min_R1	1	HLRDFGEEHPFYDR	14	1	Q68CQ4	Q68CQ4	DIEXF	Digestive organ expansion factor homolog	0		60.401	0.025997000000000003	9041000.0	987.58	750.13	966.63	881.01	604.38	545.68	667.24	536.52	748.53	721.19	False	True	944.1671656949026	874.0762324701068	763.7475727805378	803.7732211562668	683.8665635297959	651.1249371126845	816.8855550318988	517.6502874975693	713.7310036805267	590.5755025260158	1.5987238916218176	1.4800414658777727	1.2932259626649405	1.360999936025723	1.1579663575694463	1.1025261534345498	1.3832025736555396	0.876518388052789	1.208534726936266	1.0	9.205977703515074	-3.000000000000022	0.2433206013763881	1.0123725989739618	4.697115130847343	0.6578197893399231	0.12273607129784077	29.019392064302373	0.3899697602456615	0.15706584675077115	43.38772891820877	0.0009999999999999488	3.000000000000022	3.684742531873381	
HLS(ph)AEDFSR	ddPTM_K562_Methotrexat_30min_R1	2	HLSAEDFSR	9	0	Q08495-3;Q08495-2;Q08495;Q08495-4	Q08495-3	DMTN	Dematin	1	HLS(1)AEDFSR;HLS(1)AEDFSR	98.75399999999999	0.0086788	40271000.0	1798.85	1822.3600000000001	2143.04	2305.1	1602.1799999999998	1762.51	1699.37	1682.35	1567.94	1807.67	True	False	1719.774707882172	2123.474015176334	1693.2451903743959	2103.01546189863	1812.8947528974636	2103.090113089134	2080.4969810781076	1623.1807969349425	1495.0468116319255	1480.2834463195604	1.161787434803828	1.4345050067647132	1.143865517502289	1.4206843068652646	1.2246943363481346	1.4207347372005423	1.4054720305431114	1.0965337759945022	1.0099733367613286	1.0	10.531657735817818	-9.4207104499853	4.377167121822329	1.017038666432285	1.317718870659353	0.613533961431013	0.10338046567648931	0.1438122339562063	4.5800792869232625	0.05888901195514004	0.026004061715257012	3.795679637357557e-10	9.4207104499853	0.300680204227068	
HLT(ph)PPQGNS(ph)PHSNER	ddPTM_K562_Methotrexat_30min_R1	1	HLTPPQGNSPHSNER	15	0	A0A2R8Y5P9;Q8TF72	A0A2R8Y5P9	SHROOM3	Protein Shroom3	2	HLT(1)PPQGNS(1)PHSNER	69.612	0.028025	0.0	1709.9	1702.9	1777.3	1533.9	2108.6	1837.8	1642.6	2165.6	2044.6	1948.8	True	False	1634.7348433764498	1984.275280649147	1404.2690182415708	1399.425368533385	2385.917859391323	2192.928840026559	2010.9948634605184	2089.434620526236	1949.5469922717925	1595.8534357419	1.0243640216349028	1.2433944347318289	0.8799486135697273	0.8769134666071654	1.4950732980576804	1.3741417544444383	1.2601375655312748	1.3092897967505854	1.2216328571335644	1.0	10.640112444218726	-7.753719111914361	24.999973945198267	1.2962197533227668	1.0140860539322973	0.4296030708440586	0.1516225640259856	167.28412987827835	541701.0050533854	0.045541772816591115	0.05767533237187619	1.7631160060070758e-08	7.753719111914361	-0.2821336993904695	
HLTYENVER	ddPTM_K562_Methotrexat_30min_R1	2	HLTYENVER	9	0	H3BMH2;H3BSC1;P62491-2;Q15907-2;P62491;Q15907	H3BMH2	RAB11A;RAB11B	Ras-related protein Rab-11A;Ras-related protein Rab-11B	0	;	182.39	1.419e-07	23917000.0	4448.1	3481.1	5271.7	5069.1	4097.7	3432.7	3409.5	4678.1	4167.3	4607.5	False	True	4252.566850004553	4056.2926064171374	4165.242212043035	4624.699873285471	4636.61937419512	4096.020692762631	4174.167166059078	4513.568571427678	3973.5631325903573	3773.037102412152	1.1270938330518487	1.0750736068362265	1.1039494441706235	1.2257234020648353	1.2288825284095057	1.0856030782586241	1.1063149003730917	1.1962693312880741	1.0531471132499615	1.0	11.88151057171783	-9.956454208823896	5.496544600582737	1.0003565258048122	1.1420716674150178	0.45212170682149055	0.05307488324950125	0.1564640175439802	10.6029732536478	0.05533954528190304	0.014394264499773898	1.1054670215579068e-10	9.956454208823896	0.1417151416102056	
HMDPPPAPVQDRS(ph)PS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	HMDPPPAPVQDRSPSPR	17	1	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	2	HMDPPPAPVQDRS(1)PS(1)PR;HMDPPPAPVQDRS(1)PS(1)PR	80.016	0.015181	28212000.0	6736.0	5854.1	7959.5	6812.0	5802.0	5797.0	5499.1	7190.7	6601.3	6730.9	True	False	6439.893505458658	6821.3905223138	6288.909723003312	6214.802536312292	6565.064697044704	6917.188206352139	6732.413158197819	6937.799005272442	6294.407003855907	5511.868786245455	1.1683684345913739	1.2375821680182553	1.140975949699114	1.1275309295861626	1.1910778270751723	1.2549624228380718	1.221439301131072	1.2587017714545947	1.1419733030588881	1.0	12.428325828784446	-10.018828002699927	20.927580292560766	0.9999999977244028	1.199255050641952	0.6691979631245543	0.042614535380385045	92.20106846803071	102483.7409921832	0.04459599996573215	0.01151463767876406	9.575732319978396e-11	10.018828002699927	0.19925505291754908	
HMDPPPAPVQDRS(ph)PSPR	ddPTM_K562_Methotrexat_30min_R1	4	HMDPPPAPVQDRSPSPR	17	1	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	HMDPPPAPVQDRS(0.775)PS(0.225)PR;HMDPPPAPVQDRS(0.624)PS(0.376)PR;HMDPPPAPVQDRS(0.589)PS(0.411)PR;HMDPPPAPVQDRS(0.632)PS(0.368)PR	124.2	0.00016321	78822000.0	9371.0	9036.800000000001	11762.0	10290.0	9560.900000000001	8869.699999999999	7981.4	10955.4	10203.4	10453.8	True	False	8959.062060518576	10529.97760066371	9293.316937240394	9387.891676255647	10818.325932777438	10583.643994114465	9771.43212177267	10570.092372420166	9729.046161080903	8560.515520606867	1.0465563713951955	1.2300634903722742	1.0856024867742518	1.0966502722478713	1.2637470146202727	1.236332551309267	1.1414537008023506	1.2347495132712332	1.1365023680713096	1.0	13.063481964072189	-6.239670257109363	23.414920877417394	1.1666824882562237	1.0465560729500212	0.1428490180520715	0.07983219252004291	4366.2270700487015	4696156.078771763	0.019267651176619247	0.8345632608925342	5.758770123825708e-07	6.239670257109363	-0.1201264153062025	
HNGS(ph)LSPGLEARDPLEAR	ddPTM_K562_Methotrexat_30min_R1	1	HNGSLSPGLEARDPLEAR	18	1	Q9C0C2	Q9C0C2	TNKS1BP1	182 kDa tankyrase-1-binding protein	1	HNGS(0.864)LS(0.136)PGLEARDPLEAR	64.52199999999999	0.027811000000000002	23453000.0	2324.4	1686.4	2409.0	2188.6	1763.4	1481.9	1483.2	1716.4	1861.6	2122.0	True	False	2222.2221591579737	1965.0489361011935	1903.383820932843	1996.7288360207115	1995.318008750195	1768.2562019998668	1815.8453558289557	1656.033239135219	1775.0546223286544	1737.6852373995853	1.2788404432113891	1.1308428556611634	1.0953559252084242	1.1490739479428278	1.1482620475824221	1.0175929241627386	1.0449794454986197	0.9530110537242309	1.0215052669636486	1.0	10.76295106211452	-3.000000059175419	0.22137526287026094	0.9647325398539995	2.483881093871797	0.7553849865216181	0.04497805091827496	26.11473080910278	0.33478260039343866	0.07413978291570808	14.206393382279298	0.000999999863743572	3.000000059175419	1.5191485540177974	
HNSS(ph)DGFFNNGPLR	ddPTM_K562_Methotrexat_30min_R1	2	HNSSDGFFNNGPLR	14	0	Q9HC44	Q9HC44	GPBP1L1	Vasculin-like protein 1	1	HNS(0.144)S(0.856)DGFFNNGPLR;HNS(0.063)S(0.937)DGFFNNGPLR	109.95	0.0019132	50811000.0	2014.37	1785.31	1914.0900000000001	1973.4900000000002	1479.97	1398.13	1314.77	2027.24	1897.7599999999998	2387.55	True	False	1925.8207067385335	2080.302132418656	1512.3486665875243	1800.4771957408907	1674.611995809248	1668.2988350779915	1609.6406408328169	1955.9408201494296	1809.5335518212453	1955.141559167473	0.9850032074191986	1.0640161182520607	0.7735238706866341	0.9208935216473837	0.8565170066367581	0.8532880022193262	0.8232859831992037	1.000408799546104	0.9255255934469371	1.0	10.933057352202571	-12.122675564336483	7.5893610686601045	1.0000000200283952	0.908803517980842	0.09082674016956993	0.08375222447591045	2.9355489772305207e-08	3.378735436392193e-09	0.08394316402147986	0.02035920335452995	7.539185612831769e-13	12.122675564336483	-0.09119650204755314	
HPPEQTNGVHT(ph)PPHVASALAGAVS(ph)PGALRR	ddPTM_K562_Methotrexat_30min_R1	1	HPPEQTNGVHTPPHVASALAGAVSPGALRR	30	1	X6RKU3;Q6P3S6	X6RKU3	FBXO42	F-box only protein 42	2	HPPEQT(0.004)NGVHT(0.993)PPHVAS(0.064)ALAGAVS(0.938)PGALRR	51.945	0.0031094	25370000.0	268.4	166.94	427.64	292.34	161.96	162.62	0.0	133.0	65.01	311.68	True	False	256.6014573730857	194.52399750517867	337.8842080463766	266.7110060871309	183.26057882339882	194.04401347541574	0.0	128.3223146148824	61.987699289635756	255.23173175904935	1.0053665960913096	0.762146603655138	1.3238330740370285	1.0449758901409583	0.7180164376912402	0.7602660223243806	0.0	0.5027678718883772	0.2428683097607747	1.0	7.995663893507373	-8.219018516157126	1.8858222443119717	0.40756863738963783	1.0248598362610795	0.438080972207462	0.2828867632954423	0.2921200145034566	2.046078002257865	0.11029464090703198	0.10403800887860894	6.039228805589361e-09	8.219018516157126	0.6172911988714416	
HPPVLT(ph)PPDQEVIR	ddPTM_K562_Methotrexat_30min_R1	8	HPPVLTPPDQEVIR	14	0	P05771-2	P05771-2	PRKCB	Protein kinase C beta type	1	HPPVLT(1)PPDQEVIR;HPPVLT(1)PPDQEVIR;HPPVLT(1)PPDQEVIR;HPPVLT(1)PPDQEVIR;HPPVLT(1)PPDQEVIR;HPPVLT(1)PPDQEVIR;HPPVLT(1)PPDQEVIR;HPPVLT(1)PPDQEVIR	174.24	5.1628e-08	12365099000.0	11529.259999999998	13066.979999999998	13626.789999999999	13788.320000000002	10537.470000000001	10032.32	10060.32	11398.619999999999	10925.75	12351.060000000001	True	False	11022.447535146122	15226.076344316627	10766.71300010356	12579.519393347835	11923.332005027172	11970.923854812947	12316.602852045004	10997.724073800677	10417.814267247159	10114.16334978158	1.089803195178191	1.5054212412582244	1.0645184013501297	1.2437528402801103	1.1788747712172023	1.1835802370219248	1.2177579524964846	1.0873587555848776	1.030022346581157	1.0	13.304089363702403	-9.473042922455402	1.5672574437360118	0.9993911912058159	1.2206517487222053	0.34080748302000763	0.1126164040534041	0.4401771372512629	1.91174202010871	0.0945192027481478	0.03180652800988542	3.364783127036012e-10	9.473042922455402	0.2212605575163894	
HQDGLPYIDDS(ph)PSS(ph)SPHLSSK	ddPTM_K562_Methotrexat_30min_R1	1	HQDGLPYIDDSPSSSPHLSSK	21	0	P11274;P11274-2	P11274	BCR	Breakpoint cluster region protein	2	HQDGLPYIDDS(0.805)PS(0.198)S(0.529)S(0.467)PHLS(0.001)SK	67.49600000000001	0.028701	18241000.0	2613.9	1928.4	3903.1	3439.5	2111.1	1651.6	1181.8	1779.7	2339.9	2326.7	True	False	2498.996085795488	2247.035322804521	3083.8926490174263	3137.9643751682497	2388.7466532111457	1970.7483252736229	1446.8487334942408	1717.1069422564372	2231.118559726482	1905.312083816029	1.311594098952234	1.1793528954606094	1.6185761247264505	1.6469555837190828	1.2537298605837193	1.0343441066759709	0.7593762438101159	0.901220832451423	1.1709990078149906	1.0	10.89581161041095	-8.175431905101869	3.0298169528482144	0.9477972080531252	1.4334899005884667	0.6499829075623015	0.16103751706238134	0.17465117979929154	3.115942470644466	0.06195322747733722	0.0609356753025543	6.6767958110823916e-09	8.175431905101869	0.48569269253534153	
HQDGLPYIDDS(ph)PSSSPHLSSK	ddPTM_K562_Methotrexat_30min_R1	2	HQDGLPYIDDSPSSSPHLSSK	21	0	P11274;P11274-2	P11274	BCR	Breakpoint cluster region protein	1	HQDGLPYIDDS(0.801)PS(0.049)S(0.064)S(0.085)PHLSSK;HQDGLPY(0.057)IDDS(0.939)PS(0.002)S(0.002)S(0.001)PHLSSK	95.889	0.00010513	65557000.0	7254.4	5065.8	9667.0	8616.0	4376.9	4289.7	4015.5	4687.3	4850.3	6460.1	True	False	6935.505262173292	5902.837346122759	7638.028807371445	7860.648657202979	4952.539067992927	5118.623813832804	4916.078092186605	4522.445002213069	4624.8106116677445	5290.113290351112	1.3110315188945554	1.1158243731545834	1.4438308573282934	1.4859131035133764	0.936187713980738	0.9675830238208518	0.9292954275957139	0.8548862290835567	0.874236591511784	1.0	12.369082903348762	-7.776884254372353	24.816015053300124	0.9219164499406429	1.3306753074864743	0.8049614964189074	0.09932612841645443	98.76519833524918	158690.03290865888	0.033142543745071924	0.03771629508269879	1.6715360429705998e-08	7.776884254372353	0.4087588575458314	
HQDVPS(ph)QDDSKPTQR	ddPTM_K562_Methotrexat_30min_R1	1	HQDVPSQDDSKPTQR	15	1	Q9NRN7	Q9NRN7	AASDHPPT	L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	1	HQDVPS(1)QDDSKPTQR	77.357	0.022808000000000002	0.0	1735.7	947.53	2158.7	1868.3	1255.2	989.91	1133.2	1227.2	1211.1	1924.8	True	False	1659.4007062684982	1104.0932272438117	1705.6183703809588	1704.50903972288	1420.2808010566198	1181.1960975245886	1387.3489463493606	1184.0386804164189	1154.7962253449907	1576.200068306654	1.0527855820049725	0.7004778450682109	1.0821077886472508	1.0814039879810888	0.901079012502809	0.7493947762567814	0.8801858179335189	0.7511982166632294	0.7326457145669416	1.0	10.62223495348847	-8.00456089752549	24.453173899557278	0.8123406190943416	0.9697121466815656	0.25290134540518416	0.1258439577998972	211.76366511323587	1135378.5575835032	0.039468325985254966	0.043612886644871236	9.895530972887085e-09	8.00456089752549	0.15737152758722395	
HQGVMVGMGQK	ddPTM_K562_Methotrexat_30min_R1	2	HQGVMVGMGQK	11	0	P60709;P63261;A0A2R8Y793;I3L3I0;P68133;P62736;P68032;I3L1U9;P63267;J3KT65;I3L3R2;E7EVS6;B8ZZJ2;F6QUT6;C9JFL5;K7EM38;G5E9R0;A6NL76;F8WB63;A0A2R8YGF8;C9JUM1;C9JZR7;F6UVQ4;C9JTX5;Q562R1	P60709	ACTB;ACTG1;ACTA1;ACTA2;ACTC1;ACTG2;ACTBL2	Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2	0	;	72.2	0.018647999999999998	29203000.0	11454.8	8596.0	13558.300000000001	11926.3	7902.9	6796.8	6586.299999999999	8850.2	9604.400000000001	13155.3	False	True	10951.260707590238	10016.342892982606	10712.59811513233	10880.739795775293	8942.26987147097	8110.185406405762	8063.445433587008	8538.93344965889	9157.893540338064	10772.747692536637	1.0165707969914932	0.9297853415727847	0.9944165055080628	1.0100245644213381	0.8300825496605826	0.7528427879197895	0.7485040644898204	0.792642108899911	0.8500982109404321	1.0	13.395098649562945	-7.8077745446766835	6.19094594380054	0.8095760590979746	0.9840551704190105	0.5372307011330026	0.0708408680931315	0.13319869230444695	12.024090653653202	0.021262503924604208	0.024538110163951625	1.5567735898466067e-08	7.8077745446766835	0.17447911132103588	
HQHMHDRDDLYAEQMER	ddPTM_K562_Methotrexat_30min_R1	2	HQHMHDRDDLYAEQMER	17	1	Q9Y5B9	Q9Y5B9	SUPT16H	FACT complex subunit SPT16	0	;	61.648999999999994	0.026757999999999997	15145500.0	3470.5	2767.95	3571.0	3703.2	3443.8	3245.4	2671.2799999999997	3215.6	3554.1000000000004	3441.3	False	True	3317.940975459365	3225.3066903945087	2821.4959006024033	3378.5462055889125	3896.7200626822714	3872.5276185777498	3270.382539184718	3102.505525380571	3388.8706667481047	2818.0472231212016	1.1773901261258826	1.1445183259996035	1.0012237827148198	1.1988962349065662	1.382773159623052	1.3741883339657563	1.1605137459557973	1.1009416378566963	1.2025599283587138	1.0	11.460480072318132	-10.523643040784162	0.9862266521684795	1.0006249246619563	1.2009156750286736	0.22324181958533007	0.10852423073883609	3.444998423373072	4.842290774771037	0.12205175785579535	0.0385709248735169	2.9947250766114604e-11	10.523643040784162	0.20029075036671729	
HQLGPSLRS(ph)PPR	ddPTM_K562_Methotrexat_30min_R1	2	HQLGPSLRSPPR	12	1	Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;A0A0C4DGG3	Q8NHM5-4	KDM2B	Lysine-specific demethylase 2B	1	HQLGPS(0.004)LRS(0.996)PPR;HQLGPSLRS(1)PPR	118.52	0.00096709	38747000.0	5299.6	4144.5	6011.6	5388.9	4112.700000000001	4098.6	4087.3	4766.1	4983.5	4725.4	True	False	5066.635929561864	4829.308180545185	4749.847313374797	4916.463503807003	4653.592137114058	4890.596443428477	5003.981069902702	4598.473561548803	4751.818172741109	3869.5842699377936	1.3093489057529464	1.248017317535462	1.2274825878003566	1.2705404924250527	1.2026077770852803	1.2638557793980016	1.2931572801703437	1.1883637209489502	1.2279919084996431	1.0	11.917962862939712	-15.106841084179628	0.2735149267991771	1.004182580490074e-09	1.2654765518665154	0.8388991046783434	0.033176564689444035	47.13904120173911	0.7198802491188391	26.36441579303372	0.040396415143333114	7.819138679798339e-16	15.106841084179628	1.265476550862333	
HQNS(ph)LPELEAAEAGAPGSGPVDLFR	ddPTM_K562_Methotrexat_30min_R1	1	HQNSLPELEAAEAGAPGSGPVDLFR	25	0	Q96BZ8	Q96BZ8	LENG1	Leukocyte receptor cluster member 1	1	HQNS(1)LPELEAAEAGAPGSGPVDLFR	111.33	4.8243e-08	10357000.0	1152.5	1334.9	1416.9	1011.6	1246.5	1067.4	919.2	1654.1	1234.3	1501.5	True	False	1101.837479964535	1555.4695355796264	1119.5120530841616	922.9145986103225	1410.4365985636375	1273.6599433259055	1125.3539988389805	1595.924365447194	1176.9176624088195	1229.5638001675186	0.8961206240899563	1.2650580111155725	0.9104952934785789	0.750603261485563	1.1471032234126253	1.0358632412180475	0.915246527822029	1.2979597847868989	0.9571830776479217	1.0	10.263930880756904														
HQPASASSTAAS(ph)PAHPAK	ddPTM_K562_Methotrexat_30min_R1	2	HQPASASSTAASPAHPAK	18	0	Q96L91-3;Q96L91-5;Q96L91-2;Q96L91	Q96L91-3	EP400	E1A-binding protein p400	1	HQPAS(0.009)AS(0.126)S(0.083)T(0.181)AAS(0.602)PAHPAK;HQPASASS(0.001)T(0.004)AAS(0.995)PAHPAK	139.04	7.3802e-09	1246500.0	2091.07	1654.54	3220.3199999999997	2162.1	1397.0300000000002	1447.68	1355.2800000000002	1729.19	1871.66	2176.18	True	False	1999.1490665765207	1927.9246126285984	2544.4188402766526	1972.5520498768049	1580.7639320428066	1727.4236713078947	1659.2360395414416	1668.373407585778	1784.6469351244368	1782.0527143846493	1.1218237543926055	1.0818561073230202	1.4278022303931968	1.1068988217657387	0.8870466733576124	0.9693448781644945	0.9310813457694954	0.9362087855868364	1.0014557485975848	1.0	10.799324298096831	-7.567605718155019	5.850720483830043	0.9527421556715043	1.2088183549180753	0.6227811877699425	0.09047833285566864	0.12007572093730172	9.882003506620375	0.027077487404722607	0.0355168725664367	2.706414314695601e-08	7.567605718155019	0.256076199246571	
HQPS(ph)TPDPFLKPR	ddPTM_K562_Methotrexat_30min_R1	2	HQPSTPDPFLKPR	13	1	O14686;O14686-3	O14686	KMT2D	Histone-lysine N-methyltransferase 2D	1	HQPS(0.5)T(0.5)PDPFLKPR;HQPS(0.5)T(0.5)PDPFLKPR	125.5	0.00055428	30800000.0	10337.7	7239.0	12405.8	10414.1	6968.5	6418.6	6708.2	7580.5	8125.3	10511.9	True	False	9883.267086012467	8435.121708038741	9801.99211528795	9501.112021933328	7884.979893374017	7658.903608985997	8212.684611631472	7313.889518331695	7747.556576497116	8608.093047606359	1.1481366466828207	0.9799059630732366	1.1386949538159996	1.1037417891963064	0.9159961271058267	0.8897329021223462	0.9540655016403619	0.8496527021586342	0.9000316950165251	1.0	13.071477957188913	-7.765559747573482	24.90070537038316	0.9110943655568234	1.0878599411919545	0.6923350450280175	0.05679111482302778	53.80459937070415	325158.3882727335	0.016751780004275556	0.019680458037654173	1.7156956589890803e-08	7.765559747573482	0.17676557563513107	
HQPWQSPERPLS(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	HQPWQSPERPLSR	13	1	V9GYS7;E7ES68;G5E9D5;Q9BQ52-2;Q9BQ52;J3QRS2;V9GYU5;J3QL08	V9GYS7	ELAC2	Zinc phosphodiesterase ELAC protein 2	1	HQPWQSPERPLS(1)R;HQPWQS(0.223)PERPLS(0.777)R	80.719	0.025788	111399000.0	1518.53	1551.5300000000002	2054.15	1716.9	1541.79	1575.47	1578.2	1491.68	1526.58	1717.6399999999999	True	False	1451.777239436482	1807.893960999221	1623.0119866206737	1566.382042659214	1744.5624093858241	1879.907280224531	1932.151524116274	1439.2167689077276	1455.6096290043388	1406.5587517280978	1.0321483106573606	1.2853312801744277	1.1538885131009575	1.1136271703793086	1.2403053958766066	1.3365295107046735	1.3736728179625863	1.0232183811301918	1.0348729672443309	1.0	10.457954099708246	-9.30291136507187	21.730771621095215	1.0217834183864214	1.2206226801981817	0.4731242904284344	0.09669816211883411	106.70478225545618	55910.13859037203	0.055530079322763486	0.02667714853449156	4.978386782406422e-10	9.30291136507187	0.19883926181176026	
HQQDS(ph)DLSAACSDADLHR	ddPTM_K562_Methotrexat_30min_R1	2	HQQDSDLSAACSDADLHR	18	0	Q9H9J4-2;Q9H9J4	Q9H9J4-2	USP42	Ubiquitin carboxyl-terminal hydrolase 42	1	HQQDS(1)DLSAACSDADLHR;HQQDS(1)DLSAACSDADLHR	149.9	1.5824e-12	28925000.0	3100.8	2743.2	5889.3	3752.3	3124.2	2772.5	2423.3999999999996	2916.7	2412.3999999999996	2590.8999999999996	True	False	2964.4925447930846	3196.467173572577	4653.21641204641	3423.341684821583	3535.08706075613	3308.246386425963	2966.9091392367104	2814.118007798702	2300.2480505509493	2121.6629036656855	1.3972495534852436	1.5065857861066936	2.1931930864261493	1.6135181884487553	1.666186958657953	1.5592705046170001	1.3983885630986232	1.3263737622676217	1.0841722530835198	1.0	11.050979739292544	-9.264074906584975	0.9054626449299732	1.0028189872926965	1.6982008340146242	0.6064324913033468	0.197591539175443	0.4134015001248021	0.6126375633649667	0.18635906735600136	0.07832328539654873	5.444087457846434e-10	9.264074906584975	0.6953818467219277	
HRDLLHNEDRHDDYFQER	ddPTM_K562_Methotrexat_30min_R1	2	HRDLLHNEDRHDDYFQER	18	2	Q8N684-2;Q8N684;Q8N684-3	Q8N684-2	CPSF7	Cleavage and polyadenylation specificity factor subunit 7	0	;	82.34899999999999	0.0027126	60771000.0	3969.7	3417.7	4134.6	5242.9	3874.3	3091.6	2493.8999999999996	2461.6	2691.7	2565.1000000000004	False	True	3795.1967411845667	3982.416834032879	3266.8039626521104	4783.2630971273775	4383.838358455755	3689.007945274843	3053.220558860457	2375.024132751839	2566.5634545133453	2100.535533672796	1.8067757866245888	1.8959054822888926	1.555224327455241	2.2771636187290865	2.087009854477726	1.7562225852112083	1.453543874843139	1.130675532348219	1.2218614793084206	1.0	11.036541476018495	-8.903344880570968	1.9915210467938196	1.1234714417622023	1.9215518021710454	0.7898985286355438	0.1829894146173805	0.15990266239226208	1.2785634807699022	0.10733398107731279	0.06081472193114034	1.2492665725563264e-09	8.903344880570968	0.7980803604088431	
HRERT(ph)LNQSETAIQPSWY(ph)F	ddPTM_K562_Methotrexat_30min_R1	1	HRERTLNQSETAIQPSWYF	19	2	B7ZBL3;Q8N0V5-2;Q8N0V5-3;Q8N0V5	B7ZBL3	GCNT2	N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase, isoform A	2	HRERT(0.995)LNQS(0.003)ET(0.003)AIQPS(0.059)WY(0.941)F	45.438	0.031909	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
HRGYLGVMPAY(ph)SAAEDALT(ph)TK	ddPTM_K562_Methotrexat_30min_R1	1	HRGYLGVMPAYSAAEDALTTK	21	1	I3NI53;I3L2W5;I3L325;Q14894	I3NI53	CRYM	Ketimine reductase mu-crystallin	2	HRGYLGVMPAY(0.766)S(0.234)AAEDALT(0.5)T(0.5)K	66.702	0.0079742	47813000.0	392.97	548.51	447.92	635.76	358.38	599.39	521.0	499.7	494.76	443.84	True	False	375.69550932899205	639.1419544241377	353.9077131889746	580.023907881078	405.51325165923504	715.2136344670356	637.8475123967672	482.12526776734376	471.7587155905273	363.45627510246527	1.0336745712343975	1.7585112658846	0.9737284439213527	1.595856083974773	1.1157139921299009	1.9678120408442616	1.754949786509934	1.3265014275277636	1.2979792836360564	1.0	8.505638003748633	-10.043965144276358	2.044734979747885	1.0054790682568873	1.4605573991113672	0.15352168881767325	0.316680238342994	0.6756780265842883	6.421684882477587	0.29717391884016026	0.08284039714568597	9.03722001975902e-11	10.043965144276358	0.4550783308544799	
HRHS(ph)PTGPPGFPR	ddPTM_K562_Methotrexat_30min_R1	1	HRHSPTGPPGFPR	13	1	P98175-2;P98175;P98175-5	P98175-2	RBM10	RNA-binding protein 10	1	HRHS(1)PTGPPGFPR	89.46600000000001	0.015358000000000002	20132000.0	2116.6	2140.1	2547.2	2360.1	1892.2	2002.8	1668.6	1772.9	1755.0	2121.5	True	False	2023.55679834528	2493.7151495197836	2012.5775295475878	2153.1936972916387	2141.057466347463	2389.8127548183656	2042.8260253075748	1710.5461021107142	1673.4104330612317	1737.2757922446826	1.1647873109028373	1.4354169675603021	1.1584674917660573	1.2394081048637424	1.232422322296373	1.3756093105577436	1.1758789447403166	0.984614020264778	0.9632382149866185	1.0	10.76261108449049	-9.153014577179126	3.4145894703702213	0.9778411716056087	1.2680032743988336	0.7091097751261138	0.08136020026019444	0.1300763304188954	2.8089497038336493	0.041599138048068494	0.022060554575496428	7.030487215201122e-10	9.153014577179126	0.29016210279322496	
HRLS(ph)FASFS(ph)SMFHAFLS(ph)NNRK	ddPTM_K562_Methotrexat_30min_R1	1	HRLSFASFSSMFHAFLSNNRK	21	2	H0YJ83;A0A087WWY9;Q8TB24-4;Q8TB24	H0YJ83	RIN3	Ras and Rab interactor 3	3	HRLS(0.784)FAS(0.216)FS(0.511)S(0.51)MFHAFLS(0.979)NNRK	45.07	0.026938	5067200.0	706.77	547.98	961.48	769.07	756.68	669.19	761.15	888.89	1028.1	983.73	True	False	675.7012370625026	638.5243809325973	759.6784874016233	701.6468271582049	856.1966830334002	798.501496603206	931.857263072552	857.6272348723518	980.3038554018538	805.5669644614014	0.8387896560707073	0.7926397296586162	0.9430358007661611	0.8709975186573383	1.0628497949960616	0.9912291986018575	1.1567719434666586	1.0646256273005903	1.2169116890949974	1.0	9.653860710774653	-7.7295739557258365	0.8571255374551818	1.1146437570138437	0.8155304557471934	0.7009239841193049	0.07095080787641642	0.3247822510874684	0.5131404798142724	0.03403220860176398	0.058687377989016326	1.8639147463915617e-08	7.7295739557258365	-0.29911330126665026	
HRPS(ph)EADEEELAR	ddPTM_K562_Methotrexat_30min_R1	1	HRPSEADEEELAR	13	1	A0A2R8Y611;O14617-3;O14617-4;O14617-2;O14617;O14617-5	A0A2R8Y611	AP3D1	AP-3 complex subunit delta-1	1	HRPS(1)EADEEELAR	74.783	0.032201	16616000.0	907.53	826.86	969.67	1116.9	797.59	641.7	627.27	718.2	792.2	744.91	True	False	867.6360678457394	963.4845607831081	766.1495183245956	1018.9831110991191	902.4870651009804	765.6994431630437	767.9512650693288	692.9404989203646	755.3707949123124	609.9995806745166	1.4223551873369114	1.5794839722967022	1.2559836803123927	1.6704652648652032	1.4794880089967295	1.2552458516715037	1.2589373655308986	1.1359688119033373	1.2383136297848751	1.0	9.252664440714177	-8.474477128183356	2.0008385187691906	1.1610958880774362	1.486076979091482	0.6264090691403148	0.11916527193655867	0.2254320823339596	1.8002007774209858	0.05080212607890315	0.040214917088805015	3.3536896595868485e-09	8.474477128183356	0.3249810910140458	
HRPS(ph)PPATPPPK	ddPTM_K562_Methotrexat_30min_R1	1	HRPSPPATPPPK	12	1	A9Z1X7;Q8IYB3;E9PCT1;M0R088	A9Z1X7;M0R088	SRRM1	Serine/arginine repetitive matrix protein 1	1	HRPS(1)PPATPPPK	85.163	0.018618	8729100.0	2227.1	1737.6	3118.3	3023.7	1912.8	1734.8	1316.0	1823.8	1999.3	2725.0	True	False	2129.199350654243	2024.7088658499974	2463.8114440908616	2758.616915597103	2164.366727422805	2070.0255477625824	1611.1464996432744	1759.655920260319	1906.3529793842297	2231.4760942101157	0.9541663279202299	0.9073406034254163	1.1041173376150313	1.2362296520920522	0.969926020287004	0.9276485431027293	0.722009303090284	0.7885614032908523	0.8543013229362105	1.0	11.123782635751406	-8.348342303280967	2.750186729145919	0.8252989559402574	1.0456973333974524	0.40915745403187387	0.1081567201870735	0.26831247016347864	3.9642598613793534	0.04401352916871693	0.038581372233412375	4.483918360511114e-09	8.348342303280967	0.22039837745719504	
HRWPT(ph)GDNIHAEHQVR	ddPTM_K562_Methotrexat_30min_R1	3	HRWPTGDNIHAEHQVR	16	1	Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2;E9PR38;Q14671-4	Q5T1Z4	PUM1	Pumilio homolog 1	1	HRWPT(1)GDNIHAEHQVR;HRWPT(1)GDNIHAEHQVR;HRWPT(1)GDNIHAEHQVR	68.625	0.019747	431366000.0	8708.3	7375.400000000001	8396.2	9206.5	6674.9	6346.1	6448.5	6809.7	7381.599999999999	6834.3	True	False	8325.493559023995	8594.059489635167	6633.952360861911	8399.380439013376	7552.766347174023	7572.394010062322	7894.740275797613	6570.198991225293	7038.431027170824	5596.542044278972	1.487613868198252	1.5356017022011632	1.1853663044742826	1.5008161061882108	1.3495416075529691	1.3530487129643118	1.4106461120698557	1.1739747399810272	1.2576392657258446	1.0	12.450319983891358	-14.732457137176521	0.09510883863226657	3.976164555235064e-12	1.6803899786730219	0.6306075757022551	0.09854583759169487	93.1475489316753	0.7978600246081061	20.276460521562257	2.1195438796319386	1.8515816275888826e-15	14.732457137176521	1.6803899786690457	
HS(ph)FNSFR	ddPTM_K562_Methotrexat_30min_R1	1	HSFNSFR	7	0	P51828	P51828	ADCY7	Adenylate cyclase type 7	1	HS(0.855)FNS(0.145)FR	82.75	0.030022000000000004	2685400.0	268.51	361.37	327.37	389.74	379.47	446.44	199.4	267.28	367.16	251.31	True	False	256.7066219047959	421.0802502602514	258.6595107757515	355.57209931038636	429.37695632326	532.7082116342673	244.12052585780307	257.879610904254	350.09081173946544	205.79532375630987	1.2473880223283016	2.0461118482889757	1.2568774938833895	1.7277948440239241	2.0864271767015548	2.588534092567951	1.1862297033866307	1.2530878068425846	1.7011601884308187	1.0	7.685066390324247														
HS(ph)SALT(ph)T(ph)HKR	ddPTM_K562_Methotrexat_30min_R1	1	HSSALTTHKR	10	1	Q8TD23	Q8TD23	ZNF675	Zinc finger protein 675	3	HS(0.5)S(0.5)ALT(1)T(1)HKR	95.531	0.025825	13230000.0	0.0	0.0	0.0	63.964	0.0	0.0	0.0	67.11	117.21	63.806999999999995	True	False	0.0	0.0	0.0	58.356375430516636	0.0	0.0	0.0	64.74970326168992	111.76093268325188	52.2509339975284	0.0	0.0	0.0	1.1168484650107315	0.0	0.0	0.0	1.2392066190578095	2.138926984320289	1.0	5.707384920818857	-9.372179473311876	4.253467158890122	1.5990386187603267	0.17307025881554852	0.672755925902828	0.4179707600040253	0.1334993348852069	4.030986392513554	0.24924222157051754	0.1117525274974568	4.2444412507195133e-10	9.372179473311876	-1.425968359944778	
HS(ph)VQS(ph)IKSTLSAPT(ph)SPCS(ph)QS(ph)APSFK	ddPTM_K562_Methotrexat_30min_R1	1	HSVQSIKSTLSAPTSPCSQSAPSFK	25	1	K7ER94;Q2V2M9-2;Q2V2M9;Q2V2M9-3;Q2V2M9-4	K7ER94	FHOD3	FH1/FH2 domain-containing protein 3	5	HS(0.996)VQS(0.37)IKS(0.324)T(0.324)LS(0.324)APT(0.36)S(0.36)PCS(0.647)QS(0.647)APS(0.648)FK	43.799	0.030957	0.0	480.58	300.65	439.67	452.76	462.66	469.29	413.51	479.15	469.92	531.72	True	False	459.45427863024383	350.3273023237806	347.38927544605394	413.06723375524825	523.5078994716828	559.9736507433148	506.2501436683056	462.29802291519434	448.07352176873724	435.42035552785416	1.0551970591114272	0.8045726339529616	0.7978250695811376	0.9486631217653857	1.20230460708949	1.286052991400612	1.162669905623924	1.0617280911333526	1.0290596571341821	1.0	8.766265043632131	-7.621810886085315	4.96344500860348	1.1358477653448042	0.8770521046682954	0.5281067359569913	0.10338532822485004	0.159427843392442	6.453912297797253	0.03261998019857868	0.04251128333037503	2.38885128385781e-08	7.621810886085315	-0.25879566067650883	
HSCSPMGDGDPEAMEES(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	HSCSPMGDGDPEAMEESPR	19	0	A0A075B784;Q9P275	A0A075B784	USP36	Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36	1	HSCSPMGDGDPEAMEES(1)PR;HSCSPMGDGDPEAMEES(1)PR	64.68	0.013496000000000001	27312200.0	4269.8	4005.5099999999998	5543.6	4628.1	3883.8	3440.9	3289.7	3876.2	3768.8	3892.3	True	False	4082.104704514161	4667.352445471238	4380.0741177763875	4222.361658588801	4394.587774971083	4105.805226709863	4027.498966471488	3739.871848948926	3593.589310610354	3187.3667528418478	1.2807138371743907	1.4643286472477128	1.3741983453492213	1.3247178583462837	1.3787518399170349	1.288149605955806	1.26358190907293	1.1733421783403075	1.1274476987646054	1.0	11.63814931634891	-9.468135594669613	0.6545634590200992	1.000474415909201	1.3804377053653965	0.876428118584081	0.04534980780273296	0.21147664449011994	0.19192433717003496	0.041803010730521756	0.020164292481297738	3.4030192463645096e-10	9.468135594669613	0.3799632894561955	
HSDSGTSEASLS(ph)PPS(ph)SPPSRPR	ddPTM_K562_Methotrexat_30min_R1	1	HSDSGTSEASLSPPSSPPSRPR	22	1	A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4	A0A1B0GV47	KIF21A	Kinesin-like protein KIF21A	2	HS(0.002)DS(0.008)GT(0.091)S(0.008)EAS(0.361)LS(0.531)PPS(0.714)S(0.286)PPSRPR	94.955	0.00040214	16666000.0	573.54	521.04	649.75	647.26	531.03	375.12	417.37	575.2	732.76	657.99	True	False	548.3278683374053	607.1330038343012	513.3763543591178	590.5157207359797	600.8697528561959	447.60663101031815	510.97584692713804	554.9698899735364	698.694147538432	538.8216349465374	1.0176426349172323	1.1267791871321977	0.9527760599480303	1.09593914281963	1.1151552088583359	0.8307139171476109	0.9483209540720051	1.029969574307463	1.2967076713758114	1.0	9.07366396931184	-12.286740453605573	5.197498076217748	0.9999922553697567	1.0394607969417744	0.010537562116406218	0.1194495680741753	1.0888456670796037e-05	1.4940247114409592e-06	0.11747708368190887	0.02848678740391585	5.167250862174828e-13	12.286740453605573	0.039468541572017735	
HSDSGTSEASLS(ph)PPSS(ph)PPSRPR	ddPTM_K562_Methotrexat_30min_R1	2	HSDSGTSEASLSPPSSPPSRPR	22	1	A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4	A0A1B0GV47	KIF21A	Kinesin-like protein KIF21A	2	HSDS(0.001)GT(0.001)S(0.002)EAS(0.129)LS(0.848)PPS(0.187)S(0.827)PPS(0.003)RPR;HSDSGTSEAS(0.019)LS(0.631)PPS(0.466)S(0.883)PPS(0.001)RPR	125.39	1.498e-06	63939000.0	3176.8	2850.1	4012.8999999999996	3883.2000000000003	2997.3	2580.2	2729.1	3449.2	3165.1	3223.3	True	False	3037.151675792914	3321.0305815832594	3170.647129523209	3542.7658850569424	3391.497486461925	3078.787133004964	3341.1701460307463	3327.889680974827	3017.955191841657	2639.5291355843924	1.1506414666343465	1.2581905373997633	1.2012169469086869	1.342196165708386	1.284887308399059	1.1664152865368238	1.265820521163147	1.2607891445903785	1.143368774057302	1.0	11.366064875478784	-10.043008290554168	3.1111905813193896	1.0003591523697977	1.2434093560282427	0.6583849238871575	0.05390893302617628	0.15980322775822856	3.869048240651766	0.052194517073160016	0.013920194801891494	9.057153108937675e-11	10.043008290554168	0.24305020365844499	
HSGNITFDEIVNIAR	ddPTM_K562_Methotrexat_30min_R1	2	HSGNITFDEIVNIAR	15	0	P30050;P30050-2	P30050	RPL12	60S ribosomal protein L12	0	;	101.01	0.004114100000000001	19388300.0	2755.5699999999997	2447.66	2909.5	3367.0	2682.85	2631.31	2526.5699999999997	3377.3999999999996	2968.7	3539.1000000000004	False	True	2634.4384422263556	2852.0942118936478	2298.8357106700323	3071.820337604738	3035.6917998046165	3139.7734171565367	3093.217637996737	3258.6149276714577	2830.6857849737216	2898.1346954198266	0.90901173309501	0.9841137530291671	0.7932121699875032	1.0599301483327888	1.0474640135264186	1.0833773261534714	1.06731327666903	1.1243835329052612	0.9767267854897496	1.0	11.50090893266196	-7.293363886205251	24.191729052343785	1.0583385102425549	0.9043126787927395	0.5974230277113396	0.058298968145019704	275.2591755513398	208584.8865545199	0.015676094924840362	0.02325415075794235	5.0890429217654574e-08	7.293363886205251	-0.1540258314498154	
HSHGPLQADVFVELLS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	HSHGPLQADVFVELLSPR	18	0	Q9NRL2;Q9NRL2-2	Q9NRL2	BAZ1A	Bromodomain adjacent to zinc finger domain protein 1A	1	HSHGPLQADVFVELLS(1)PR	106.02	0.00055692	3851100.0	1867.7	1519.2	1931.8	1911.9	964.46	1416.7	1679.4	1719.2	1262.0	2205.6	True	False	1785.5981443208352	1770.2219780152602	1526.3415796089948	1744.2866954162455	1091.303394986511	1690.4572247609244	2056.048200228658	1658.734761548163	1203.329895454858	1806.1444672990206	0.9886242084450138	0.9801109546140125	0.8450827756273263	0.9657514816767234	0.6042171126092084	0.9359479573020538	1.1383630919088954	0.9183843217307529	0.6662423284746235	1.0	10.818697578322583	-6.741988825633652	21.475053378573378	0.8851654384603629	0.9843683198332008	0.06909888113288953	0.14696076032921332	147.04254818530143	162330.97167181902	0.038633909808318156	0.10160966048250883	1.811386698871847e-07	6.741988825633652	0.09920288137283795	
HSLDS(ph)DEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR	ddPTM_K562_Methotrexat_30min_R1	1	HSLDSDEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR	42	1	O95400	O95400	CD2BP2	CD2 antigen cytoplasmic tail-binding protein 2	1	HS(0.136)LDS(0.848)DEEEDDDDGGS(0.005)S(0.005)KY(0.005)DILAS(0.001)EDVEGQEAATLPSEGGVR	55.18600000000001	0.00044249	22401000.0	298.58	271.4	310.3	365.53	163.14	272.38	285.24	217.04	258.22	316.87	True	False	285.4547807095972	316.24423698877115	245.17227050039924	333.4845524219363	184.59576950635525	325.01358006662	349.2123309713127	209.40658018055686	246.2154085612942	259.48177246692086	1.1000956945674765	1.2187531863305985	0.9448535369922917	1.2851945215706797	0.7114016824819085	1.2525487897538286	1.3458067888596332	0.8070184590990966	0.9488736192160939	1.0	8.019489388492063	-9.28703294801603	24.978478242328293	0.9084595348918276	1.1149505881348307	0.21094385892735723	0.18008179469316002	1240.0735324661555	1210262.9152628258	0.09675935673908412	0.046506314670798514	5.163771925150189e-10	9.28703294801603	0.2064910532430031	
HSLGLTVS(ph)PCR	ddPTM_K562_Methotrexat_30min_R1	2	HSLGLTVSPCR	11	0	Q9H972-2;Q9H972;G5E9D9;A0A0C4DFZ6	Q9H972-2	C14orf93	Uncharacterized protein C14orf93	1	HSLGLTVS(1)PCR;HSLGLT(0.001)VS(0.999)PCR	132.24	0.00045545	18101100.0	6627.1	5262.5	7859.400000000001	6871.7	5778.5	5287.3	5499.0	5969.0	6096.6	6401.7	True	False	6335.780619065487	6132.038677794431	6209.819345055868	6269.268730002522	6538.474035138368	6308.995895022538	6732.290730652257	5759.066886738592	5813.17039669579	5242.290096258677	1.2085902349408733	1.1697251707170404	1.1845623250586033	1.1959026713299936	1.2472552863499013	1.2034808793823044	1.2842270471557773	1.0985784420531646	1.1088990288508718	1.0	12.355981475957869	-9.778251699329747	1.6174820822957885	1.0115829795991431	1.2096410798290087	0.7393572298020632	0.039625848558583955	0.1760727004797831	0.9243366348186223	0.03711335947771326	0.011144133721340542	1.666281224166808e-10	9.778251699329747	0.19805810022986559	
HSLSGS(ph)SPGMK	ddPTM_K562_Methotrexat_30min_R1	1	HSLSGSSPGMK	11	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	HSLS(0.015)GS(0.493)S(0.493)PGMK	82.494	0.022581999999999998	13007000.0	6932.3	5427.9	11269.0	6735.1	5309.5	4978.0	3942.2	5675.0	5750.1	6365.8	True	False	6627.564392501649	6324.768216475133	8903.790899996771	6144.6442399173375	6007.792314539613	5939.928047476441	4826.338701287019	5475.407033379378	5482.779106065754	5212.89193413679	1.2713795866553135	1.2132935607310762	1.7080328946951713	1.1787400002825568	1.1524874082267833	1.139468863449601	0.9258466820847724	1.0503588224270484	1.0517730226022142	1.0	12.347868237114536	-7.7682775477345185	1.9658976548226519	1.0349940682914471	1.3792272732260602	0.546175416676833	0.13801780930468738	0.2576880211439637	2.051682507811858	0.048484868634960425	0.06285804088585548	1.704992418841841e-08	7.7682775477345185	0.34423320493461307	
HSMGPGGYGDNLGGGQMYS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	5	HSMGPGGYGDNLGGGQMYSPR	21	0	P40425	P40425	PBX2	Pre-B-cell leukemia transcription factor 2	1	HSMGPGGYGDNLGGGQMY(0.002)S(0.997)PR;HSMGPGGYGDNLGGGQMY(0.002)S(0.997)PR;HSMGPGGY(0.003)GDNLGGGQMY(0.399)S(0.598)PR;HSMGPGGY(0.015)GDNLGGGQMY(0.323)S(0.662)PR;HSMGPGGYGDNLGGGQMY(0.44)S(0.56)PR	105.5	4.7898e-05	100387000.0	10500.9	8685.400000000001	12811.300000000001	11497.500000000002	8947.1	8885.4	7571.19	8536.5	8513.9	9809.9	True	False	10039.293009422636	10120.514723442426	10122.383206773333	10489.532026020348	10123.800474134556	10602.377796915865	9269.222087108032	8236.266456465743	8118.090647316251	8033.232050125438	1.2497202803031033	1.2598309945850992	1.2600635888036213	1.3057673375508374	1.2602400143509453	1.3198147060559904	1.1538596207940108	1.0252743111456781	1.0105634440361384	1.0	12.971764835859933	-9.074096290786015	2.656886871620404	1.0098112660763554	1.2749658935058066	0.961748527556456	0.02354902330855088	0.049743436966570756	0.6842776802604759	0.013055889712014945	0.006911076389944689	8.431477962245537e-10	9.074096290786015	0.2651546274294512	
HSQEQGS(ph)GGQASAASNPPSFFTTPTSDGAFELAPT	ddPTM_K562_Methotrexat_30min_R1	1	HSQEQGSGGQASAASNPPSFFTTPTSDGAFELAPT	35	0	Q99956	Q99956	DUSP9	Dual specificity protein phosphatase 9	1	HS(0.054)QEQGS(0.502)GGQAS(0.429)AAS(0.013)NPPS(0.001)FFT(0.001)T(0.001)PT(0.001)S(0.001)DGAFELAPT	48.515	0.0031021	8581000.0	510.61	412.39	453.65	529.03	468.17	422.85	506.65	672.84	486.39	459.5	True	False	488.1641957871505	480.53043806853105	358.43506449405737	482.6507612720629	529.7425610505718	504.55977799827514	620.279159608104	649.1758358306573	463.7778350636197	376.28009735396296	1.2973425892572237	1.2770551550498321	0.9525751348918172	1.2826901148004064	1.4078410332509514	1.3409154019741862	1.6484506195516728	1.7252462737086625	1.2325335257563423	1.0	8.55566317248879	-7.673741953591259	3.2942534031038426	1.4416898399439528	1.1775323318320754	0.1501280963421453	0.21202030649407833	0.3612926562150836	7.789812704208589	0.06576159038078151	0.0858972747594555	2.1196201839736554e-08	7.673741953591259	-0.26415750811187744	
HSQPS(ph)PEPHS(ph)PTEPPAWGSSIVK	ddPTM_K562_Methotrexat_30min_R1	1	HSQPSPEPHSPTEPPAWGSSIVK	23	0	Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7	Q5VZ89-5	DENND4C	DENN domain-containing protein 4C	2	HS(0.136)QPS(0.94)PEPHS(0.862)PT(0.06)EPPAWGS(0.002)S(0.001)IVK	61.18600000000001	0.028870999999999997	9663900.0	1269.1	971.24	1640.5	1578.9	760.3	779.57	960.18	1203.5	864.04	1243.2	True	False	1213.3118835774335	1131.7209017427208	1296.181468758959	1440.4802884003936	860.2927764845035	930.2108694196884	1175.5248070117625	1161.1722228497058	823.8709689927217	1018.044433145694	1.1918064124454522	1.1116615983506473	1.27320716715069	1.4149483475386226	0.8450444287841664	0.9137232512979758	1.1546890968004844	1.1405909064909434	0.8092681833611246	1.0	9.991584814720103	-7.765637160244184	24.999979452427834	0.9899475523729843	1.239981378492171	0.5220269143094061	0.1264478957904956	99.9916454143216	595502.5515703154	0.04123208875780192	0.048422482737785544	1.715389864759398e-08	7.765637160244184	0.2500338261191867	
HSQPSPEPHS(ph)PTEPPAWGSSIVK	ddPTM_K562_Methotrexat_30min_R1	1	HSQPSPEPHSPTEPPAWGSSIVK	23	0	Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7	Q5VZ89-5	DENND4C	DENN domain-containing protein 4C	1	HS(0.016)QPS(0.036)PEPHS(0.868)PT(0.08)EPPAWGSSIVK	81.37899999999999	0.00088536	4856400.0	941.38	1093.7	1742.2	1045.8	895.14	727.14	625.11	1011.0	873.12	1011.2	True	False	899.998062376585	1274.4153352786263	1376.5360285716906	954.1163377092479	1012.8665999504647	867.6495139497831	765.3068300851118	975.442556959745	832.5288417746003	828.0618812716586	1.086872953256167	1.5390339346637965	1.66235888851415	1.1522283047783903	1.2231774253332377	1.0478075776381948	0.9242145392682807	1.1779826834460163	1.0053944766737501	1.0	9.693594774489496	-7.660005973175936	2.004033489919336	1.0483829509221911	1.4321113749694718	0.49433193315775614	0.16194425914209404	0.2674005349133386	2.1987442022869104	0.054435585069687084	0.07632600560552688	2.1877315342390794e-08	7.660005973175936	0.3837284240472807	
HSS(ph)GDPSSEGTSGSGSVSIR	ddPTM_K562_Methotrexat_30min_R1	2	HSSGDPSSEGTSGSGSVSIR	20	0	C9JW56;Q9UPU7-2;Q9UPU7	C9JW56	TBC1D2B	TBC1 domain family member 2B	1	HS(0.006)S(0.994)GDPSSEGTSGSGSVSIR;HS(0.074)S(0.926)GDPSSEGTSGSGSVSIR	136.35	2.6876e-09	14764300.0	3338.3	2757.7	3653.5	2958.6000000000004	2809.4	2785.5	2268.75	3104.8999999999996	3181.2	3226.7	True	False	3191.552329167555	3213.363052114718	2886.680278031607	2699.224131522835	3178.885342964044	3323.7584524398635	2777.574940019514	2995.6989071259254	3033.3067063557774	2642.3133626377175	1.2078629182655132	1.2161173226278295	1.092482185818395	1.0215382360358294	1.203069018199525	1.2578971515785267	1.0511905890097646	1.1337409670953777	1.1479738736694525	1.0	11.367585856437962	-15.99999999997905	0.21157905663534882	0.2935389515209606	1.1665871318909156	0.28805282306372737	0.07144368592651713	214.11701356812554	2.136342784080315	64.20784158798067	0.16148439917430069	1.0000000000482399e-16	15.99999999997905	0.873048180369955	
HSS(ph)IS(ph)PVRLPLNSSLGAELSR	ddPTM_K562_Methotrexat_30min_R1	1	HSSISPVRLPLNSSLGAELSR	21	1	Q9NYV4-2;J3QSD7;Q9NYV4-3;Q9NYV4	Q9NYV4-2	CDK12	Cyclin-dependent kinase 12	2	HS(0.23)S(0.882)IS(0.867)PVRLPLNS(0.019)S(0.002)LGAELSR	78.225	0.0091103	129980000.0	2311.5	2434.3	2638.4	2185.9	1644.0	1767.1	1849.9	2356.6	2358.1	2857.4	True	False	2209.889227711951	2836.526698974821	2084.635895869329	1994.2655408286912	1860.2148159154594	2108.5670656278867	2264.787165418003	2273.717042266405	2248.4724456989698	2339.897171227885	0.9444386081941751	1.2122441677581604	0.890909191011755	0.8522876839849248	0.7949985318967212	0.9011366360690947	0.9679002963320533	0.9717166507249755	0.9609278874930478	1.0	11.192229415402716	-6.790255608637904	24.998837530962533	0.9109881790358687	1.0783415333783886	0.36772407763593196	0.08402591068228953	183.41171526048225	159114.04332959466	0.02233766795962769	0.04651151745747553	1.6208558446165896e-07	6.790255608637904	0.16735335434251986	
HSS(ph)NPPLESHVGWVMDSR	ddPTM_K562_Methotrexat_30min_R1	3	HSSNPPLESHVGWVMDSR	18	0	Q6PKG0;Q6PKG0-3;H0YC33;H0YBR8	Q6PKG0	LARP1	La-related protein 1	1	HS(0.205)S(0.795)NPPLESHVGWVMDSR;HS(0.317)S(0.683)NPPLESHVGWVMDSR;HS(0.408)S(0.592)NPPLESHVGWVMDSR	190.09	2.3255e-13	415950700.0	2820.09	2742.9900000000002	3522.8999999999996	3333.36	2458.1800000000003	2753.0299999999997	2507.76	2812.56	2943.65	3112.75	True	False	2696.122220280421	3196.222474641966	2783.491433277008	3041.129504175271	2781.4737568047817	3285.0140844805296	3070.189016675851	2713.6406706258167	2806.800354006095	2549.0008118357937	1.0577172858327457	1.2539119092473112	1.0919931529061908	1.1930672952532508	1.0912015970687592	1.2887457976581256	1.204467649606081	1.0645899593384003	1.101137489236276	1.0	11.31571611750878	-9.703869493120465	1.6552625137353179	1.0188491939055064	1.1695974124872912	0.3217165081339354	0.07368351795011133	0.40732122877665866	2.1218086197410386	0.06605436996456203	0.020106672585253157	1.977563815077094e-10	9.703869493120465	0.15074821858178478	
HSS(ph)PTEERDEPAYPR	ddPTM_K562_Methotrexat_30min_R1	1	HSSPTEERDEPAYPR	15	1	F5H4R1;J3KNB8;F5H538;Q9Y6R4-2;Q9Y6R4	F5H4R1	MAP3K4	Mitogen-activated protein kinase kinase kinase 4	1	HS(0.057)S(0.938)PT(0.005)EERDEPAYPR	98.552	0.0026676	31399000.0	1164.0	1058.8	1319.9	1235.9	904.51	971.43	708.84	1412.8	1103.5	1217.3	True	False	1112.8319537342456	1233.748703477196	1042.8710275007306	1127.550565858538	1023.4689191871603	1159.1450990679077	867.8154139871875	1363.111023217337	1052.198525859299	996.8351741218256	1.116365054749005	1.2376656999128088	1.0461820114037017	1.131130396609317	1.0267183038447636	1.162825238474426	0.870570618409107	1.3674387286927217	1.055539123392437	1.0	9.961211165676584	-6.768009766202175	24.987163351588688	1.0907105932194694	1.177015380158509	0.081563536777709	0.12440841897851966	374.1095477751512	1422757.9024984925	0.030929646851773338	0.06683977529353166	1.7060440238870775e-07	6.768009766202175	0.08630478693903965	
HSSIS(ph)PVRLPLNSSLGAELSR	ddPTM_K562_Methotrexat_30min_R1	1	HSSISPVRLPLNSSLGAELSR	21	1	Q9NYV4-2;J3QSD7;Q9NYV4-3;Q9NYV4	Q9NYV4-2	CDK12	Cyclin-dependent kinase 12	1	HS(0.047)S(0.047)IS(0.906)PVRLPLNSSLGAELSR	93.215	0.00039972	10724000.0	1543.2	1325.5	1683.6	1763.6	1151.2	1267.1	1126.8	1518.7	1587.6	1853.8	True	False	1475.3627757755062	1544.5163453523082	1330.2353677553078	1608.9879261656417	1302.6029781519937	1511.9491420163527	1379.5135834331627	1465.286460192646	1513.7928225230835	1518.0588563107208	0.9718745552204892	1.017428500174154	0.8762739087653867	1.0598982506356192	0.8580714593093307	0.9959753113201313	0.9087352428388322	0.9652369235232912	0.9971898100196162	1.0	10.568012010897373	-9.718288051539046	4.415435282880746	0.9996180501391202	0.9554598337529298	0.07667448628038387	0.05883813568934621	0.5156412847277746	20.875464958270975	0.04391431370370607	0.013984598517580863	1.9129866905140512e-10	9.718288051539046	-0.04415821638619044	
HSSNPPLES(ph)HVGWVMDSR	ddPTM_K562_Methotrexat_30min_R1	2	HSSNPPLESHVGWVMDSR	18	0	Q6PKG0;Q6PKG0-3;H0YC33;H0YBR8	Q6PKG0	LARP1	La-related protein 1	1	HS(0.002)S(0.238)NPPLES(0.76)HVGWVMDSR;HSS(0.012)NPPLES(0.981)HVGWVMDS(0.007)R	130.64	5.5204e-10	13091000.0	3257.1000000000004	2535.9	4677.4	3444.3	2714.1000000000004	2685.0	2417.6	2757.3999999999996	3149.0	3556.0	True	False	3113.921783941419	2954.9143720700986	3695.6776604530023	3142.34356662073	3071.051722552401	3203.8382497939415	2959.808341593906	2660.4206790908024	3002.6036773275328	2911.9739416554753	1.069350841158673	1.014746158885684	1.2691314326638468	1.0791111560683433	1.0546288476766001	1.1002290247049875	1.016426795327446	0.913614178009552	1.0311231272971262	1.0	11.507781730029524	-8.86806985014136	3.7181494342112384	0.9768150759069364	1.0994159390439053	0.37693017671997486	0.06853175748722516	0.244866780303779	6.427937875593804	0.031161142490696542	0.0204087607601929	1.3549714667772421e-09	8.86806985014136	0.12260086313696894	
HSTPSNSSNPSGPPS(ph)PNSPHR	ddPTM_K562_Methotrexat_30min_R1	2	HSTPSNSSNPSGPPSPNSPHR	21	0	Q9Y5S2	Q9Y5S2	CDC42BPB	Serine/threonine-protein kinase MRCK beta	1	HSTPSNSSNPSGPPS(0.972)PNS(0.028)PHR;HSTPSNSSNPSGPPS(0.963)PNS(0.037)PHR	149.53	1.0067999999999999e-16	2430800.0	312.12	213.5	338.9	160.235	317.18	193.64	194.283	193.27	304.12	53.839	True	False	298.39957852193555	248.77724612049622	267.7695213425243	146.18744633088664	358.8947295085556	231.05818945627527	237.85590835121147	186.47258455352116	289.98152757981865	44.08823538942328	6.768235922491043	5.64271270834708	6.073491464953526	3.31579263809585	8.14037410067571	5.240812824903985	5.394997242467836	4.22953159513968	6.57729947725204	1.0	5.462321829816197	-11.900561454860698	0.5775955896451098	1.2753765236159882e-17	5.74267600774687	0.5468723528330154	1.2793018096244337	16.234649415443496	3.3540435905090717	32.564472436703234	0.5197073505606286	1.2572989276364295e-12	11.900561454860698	5.74267600774687	
HSTSGT(ph)DEGEDGDEPDDGSNDVVDLLPR	ddPTM_K562_Methotrexat_30min_R1	2	HSTSGTDEGEDGDEPDDGSNDVVDLLPR	28	0	Q14008-2;Q14008;Q14008-3	Q14008-2	CKAP5	Cytoskeleton-associated protein 5	1	HS(0.011)T(0.031)S(0.092)GT(0.866)DEGEDGDEPDDGSNDVVDLLPR;HS(0.041)T(0.205)S(0.18)GT(0.574)DEGEDGDEPDDGSNDVVDLLPR	103.99	6.0327e-09	37521000.0	730.72	607.52	1000.2	1091.58	784.6800000000001	708.21	498.29999999999995	539.8699999999999	598.6800000000001	717.12	True	False	698.5984237394227	707.9023539256384	790.2716885417309	995.8828761872829	887.8791738154157	845.0615593618502	610.0564595533764	520.8824660987711	570.847497472991	587.2426189651225	1.1896248691393325	1.205468286980176	1.3457328589917394	1.6958627388834502	1.511946076700112	1.43903308797831	1.0388490886926054	0.8869970422390399	0.972081179119758	1.0	9.197812864935424	-8.833382169744318	4.4900370143599995	0.9514025816120264	1.4060565325747172	0.6888868526148467	0.13993751407495497	0.13742320996630691	5.264350294430828	0.06919718183815754	0.04646170429188124	1.4676342228860847e-09	8.833382169744318	0.4546539509626908	
HSTSGTDEGEDGDEPDDGS(ph)NDVVDLLPR	ddPTM_K562_Methotrexat_30min_R1	1	HSTSGTDEGEDGDEPDDGSNDVVDLLPR	28	0	Q14008-2;Q14008;Q14008-3	Q14008-2	CKAP5	Cytoskeleton-associated protein 5	1	HS(0.003)T(0.009)S(0.031)GT(0.128)DEGEDGDEPDDGS(0.829)NDVVDLLPR	96.068	7.1107e-07	30258000.0	438.66	402.93	625.95	379.93	256.99	400.8	242.6	352.32	330.87	355.28	True	False	419.37703163665327	469.50733386103786	494.57164911287424	346.62212677937885	290.7886895025025	478.24892756700655	297.0092255421416	339.92870590312293	315.48792591850145	290.93534926641104	1.4414784339342261	1.613785794833434	1.6999366022723914	1.1914060207994015	0.9994959025629635	1.6438323111058997	1.0208770652691253	1.1683994631805585	1.0843918647699544	1.0	8.184554787392143	-7.511716443526541	0.37711178026335124	1.0207882237450698	1.7411353236259504	0.43471744395561407	0.20294423000266254	2.4475624540385548	0.5371920226279135	0.21167672821616057	0.7381246467690507	3.078105893865276e-08	7.511716443526541	0.7203470998808805	
HSVMMT(ph)FLS(ph)NMLR	ddPTM_K562_Methotrexat_30min_R1	1	HSVMMTFLSNMLR	13	0	Q9UBF2;Q9UBF2-2	Q9UBF2	COPG2	Coatomer subunit gamma-2	2	HS(0.028)VMMT(0.996)FLS(0.977)NMLR	68.171	0.030039	29477000.0	0.0	0.0	0.0	0.0	69.065	0.0	0.0	107.77	0.0	0.0	True	False	0.0	0.0	0.0	0.0	78.14825806642406	0.0	0.0	103.9796680153825	0.0	0.0											0.0														
HT(ph)LSRR	ddPTM_K562_Methotrexat_30min_R1	1	HTLSRR	6	1	Q96ES7	Q96ES7	CCDC101	SAGA-associated factor 29 homolog	1	HT(1)LSRR	69.093	0.028100999999999998	0.0	0.0	0.0	0.0	47.883	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	43.68517173315347	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
HT(ph)YT(ph)SWDLEDMEKY(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	HTYTSWDLEDMEKYR	15	1	A7KAX9-2;A7KAX9	A7KAX9-2	ARHGAP32	Rho GTPase-activating protein 32	3	HT(0.515)Y(0.454)T(0.515)S(0.515)WDLEDMEKY(1)R	43.316	0.033814	23429000.0	141.57	0.0	218.07	0.0	0.0	0.0	0.0	218.4	115.22	139.87	True	False	135.34675231113164	0.0	172.30008710287478	0.0	0.0	0.0	0.0	210.71874820970154	109.86344734889757	114.5381876319886	1.181673598206399	0.0	1.50430254454938	0.0	0.0	0.0	0.0	1.8397248338409304	0.9591861860246035	1.0	6.839684870386089	-9.254930436386305	24.96996248192308	1.2995916396618088	0.36777811196332105	0.34269743113644024	0.5592667286749563	544.1364740542797	2087455.3719275442	0.27023430829843953	0.1512344729979751	5.55993307000123e-10	9.254930436386305	-0.9318135276984878	
HTDDEMTGY(ph)VATR	ddPTM_K562_Methotrexat_30min_R1	5	HTDDEMTGYVATR	13	0	Q16539-5;Q16539-3;Q16539-4;Q16539-2;Q16539;E7EX54;B4E0K5	Q16539-5	MAPK14	Mitogen-activated protein kinase 14	1	HTDDEMTGY(1)VATR;HTDDEMT(0.098)GY(0.902)VATR;HTDDEMTGY(0.999)VAT(0.001)R;HTDDEMT(0.014)GY(0.985)VAT(0.002)R;HTDDEMT(0.335)GY(0.665)VATR	140.33	4.8456e-06	216850000.0	20701.5	16248.999999999998	21467.1	20284.7	14945.6	14230.300000000001	13710.1	14734.9	16749.3	15875.1	True	False	19791.486847276206	18933.87106422456	16961.449075279143	18506.37184502848	16911.20836541732	16980.104076738447	16784.938924589103	14216.665215179173	15970.628698844721	12999.965557135787	1.5224260987685847	1.4564554791325277	1.3047303087636923	1.4235708366835005	1.3008656285350402	1.3061653126779194	1.291152568890901	1.093592529356782	1.2285131547966535	1.0	13.666220180448162	-3.0000000000000493	0.08197150860097714	0.7169419184249745	2.8632105345940113	0.8499244967979007	0.058309081545414684	65.00470241739714	0.38829073454775526	1.4912319997068393	15.773233397132936	0.0009999999999998864	3.0000000000000493	2.1462686161690367	
HTDRDYSLS(ph)PSQMNGHQR	ddPTM_K562_Methotrexat_30min_R1	1	HTDRDYSLSPSQMNGHQR	18	1	H0YBS0;P16157-11;P16157-9;P16157-6;P16157-7;P16157-4;P16157-13;P16157-15;A0A2R8Y4B0	H0YBS0	ANK1	Ankyrin-1	1	HT(0.001)DRDY(0.005)S(0.004)LS(0.917)PS(0.072)QMNGHQR	61.126999999999995	0.021222	45374000.0	3113.8	2463.1	3626.7	3349.8	2273.4	2169.0	1845.9	2590.6	2592.4	3155.3	True	False	2976.921080358845	2870.085409458523	2865.5052317879395	3056.128234900016	2572.3919479940405	2588.1285526268375	2259.890063595381	2499.4871296339415	2471.87988983928	2583.844594517866	1.1521285322944608	1.1107809717147745	1.1090083505283839	1.182783299500362	0.995567594681149	1.0016579782383432	0.8746230591383792	0.9673519587583149	0.9566673998443479	1.0	11.335303586326816	-7.888250117481358	4.554882588872899	0.9569464231072791	1.1340927066670132	0.8280582518213215	0.038699795037023414	0.08661984996832706	3.068687283958526	0.01251884052582945	0.014346366304885057	1.2934507069313515e-08	7.888250117481358	0.17714628355973416	
HTGMASIDSSAPETTS(ph)DSSPTLSR	ddPTM_K562_Methotrexat_30min_R1	1	HTGMASIDSSAPETTSDSSPTLSR	24	0	H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2;H0YCW2;S4R3B3;H7C453;S4R3U7	H7BZ52	ZSWIM8	Zinc finger SWIM domain-containing protein 8	1	HTGMASIDS(0.001)S(0.001)APET(0.019)T(0.053)S(0.329)DS(0.169)S(0.169)PT(0.233)LS(0.026)R	81.507	0.0083559	19816000.0	818.36	726.32	1077.1	854.07	796.69	497.32	694.89	773.11	815.27	1207.3	True	False	782.3858742765956	846.3320346709083	851.0314294424101	779.1950091292191	901.4686993258433	593.4200515409774	850.7367713807868	745.9192830970802	777.3682756477666	988.6462710238075	0.7913708848225202	0.8560514103739819	0.8608047735426259	0.788143375407983	0.9118212709104885	0.600234956559794	0.8605067315934884	0.7544855070607127	0.7862956635063735	1.0	9.94931061943106	-3.0000663577070497	13.560999433036422	0.8128108823833552	2.1748010763711356e-05	0.0	0.10082284639204452	0.0	0.0	0.021567384826489108	0.0	0.0009998472174053918	3.0000663577070497	-0.8127891343725915	
HTGPNS(ph)PDTANDGFVR	ddPTM_K562_Methotrexat_30min_R1	12	HTGPNSPDTANDGFVR	16	0	P31943;E9PCY7;G8JLB6;P55795;D6RDU3;D6RBM0;D6RAM1;D6RIH9;E5RGH4;D6RJ04;D6RIT2;D6RFM3;D6R9T0;E5RGV0;H0YAQ2;D6RIU0;E7EQJ0	P31943;E7EQJ0	HNRNPH1;HNRNPH2	Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2	1	HT(0.001)GPNS(0.998)PDT(0.001)ANDGFVR;HTGPNS(1)PDTANDGFVR;HTGPNS(0.989)PDT(0.011)ANDGFVR;HTGPNS(0.993)PDT(0.007)ANDGFVR;HT(0.002)GPNS(0.998)PDTANDGFVR;HTGPNS(0.989)PDT(0.011)ANDGFVR;HTGPNS(0.997)PDT(0.003)ANDGFVR;HT(0.001)GPNS(0.986)PDT(0.013)ANDGFVR;HTGPNS(0.98)PDT(0.02)ANDGFVR;HTGPNS(0.999)PDT(0.001)ANDGFVR;HT(0.001)GPNS(0.995)PDT(0.004)ANDGFVR;HTGPNS(0.998)PDT(0.002)ANDGFVR	329.97	0.0	2448103000.0	20218.64	16449.91	22399.510000000002	20097.720000000005	16410.8	13936.770000000002	12557.24	14509.170000000002	15851.960000000001	16740.890000000003	True	False	19329.85279471596	19167.978026838464	17698.158958415712	18335.78409132329	18569.10784733907	16629.853558503062	15373.52072278154	13998.87426722416	15115.005839583673	13708.952598459153	1.4100167504327485	1.3982087901443974	1.2909927896610376	1.337504376037027	1.3545241851245575	1.2130652169861766	1.1214219767970808	1.0211483457020338	1.1025646001053762	1.0	13.742830729023066	-8.61572659060615	1.3766501184462376	1.039379021790481	1.3633808676123764	0.925189419338482	0.04020422848528267	0.10906453261911082	0.4213299686087248	0.023166452728543552	0.015464477922508681	2.4225536815510914e-09	8.61572659060615	0.3240018458218954	
HTGPNS(ph)PDTANDGFVRL	ddPTM_K562_Methotrexat_30min_R1	3	HTGPNSPDTANDGFVRL	17	1	E7EQJ0	E7EQJ0	HNRNPH1		1	HT(0.001)GPNS(0.998)PDT(0.001)ANDGFVRL;HT(0.002)GPNS(0.998)PDTANDGFVRL;HT(0.067)GPNS(0.932)PDT(0.001)ANDGFVRL	111.57	0.00062386	233136000.0	5831.5	5882.9	8479.7	7177.9	5150.9	4756.5	4359.1	3666.18	3617.4400000000005	3789.8700000000003	True	False	5575.154242440943	6854.949232797507	6699.926851956927	6548.62465140869	5828.333634610061	5675.626307316536	5336.739138750001	3537.2383713893923	3449.2660039732345	3103.487818408842	1.796415700223152	2.208788831757696	2.158837812159346	2.1100855020485207	1.8779946871511317	1.828789619746737	1.7195940345227927	1.1397622862921157	1.1114159957430325	1.0	11.599674767827615	-9.106586591725959	1.0960121859370902	0.9750452435537595	2.063431592611272	0.9160177754742792	0.12449739227896522	0.13505758397014436	0.29435045557399003	0.10418623045949617	0.04492651156126027	7.823721963767569e-10	9.106586591725959	1.0883863490575125	
HTGPNSPDTANDGFVR	ddPTM_K562_Methotrexat_30min_R1	1	HTGPNSPDTANDGFVR	16	0	P31943;E9PCY7;G8JLB6;P55795;D6RDU3;D6RBM0;D6RAM1;D6RIH9;E5RGH4;D6RJ04;D6RIT2;D6RFM3;D6R9T0;E5RGV0;H0YAQ2;D6RIU0;E7EQJ0	P31943;E7EQJ0	HNRNPH1;HNRNPH2	Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2	0		102.29	0.0024517	8838800.0	1999.2	1575.5	2091.9	1934.2	1916.5	1943.3	1726.4	2125.3	2334.1	2338.0	False	True	1911.3175617744882	1835.824596078884	1652.8387775049473	1764.6316890392302	2168.5533422761414	2318.8152219085923	2113.58914664449	2050.5519943684917	2225.588200460525	1914.565544316789	0.9983035406899794	0.9588726808169925	0.8632970453329459	0.9216877919261507	1.132660800625652	1.211144339660651	1.1039523577129464	1.0710273150247407	1.162450774833475	1.0	10.90280133573141	-7.761290741283624	24.999999613945384	1.1214915567298283	0.9320466093978541	0.6690753650585037	0.06115384547456904	2.291421671229308	385347.47179093136	0.01874551643025332	0.0226873146405943	1.7326436797536474e-08	7.761290741283624	-0.18944494733197415	
HTSCS(ph)SAGNDSKPVQEAPSVAR	ddPTM_K562_Methotrexat_30min_R1	1	HTSCSSAGNDSKPVQEAPSVAR	22	1	A0A1X7SBY3;H0Y860;Q9P246;Q9P246-2	A0A1X7SBY3	STIM2	Stromal interaction molecule 2	1	HT(0.087)S(0.084)CS(0.711)S(0.118)AGNDSKPVQEAPSVAR	70.99	0.0038088	8814500.0	841.06	628.6	972.34	924.27	869.33	718.96	744.88	823.87	775.62	974.96	True	False	804.0880094568081	732.4654656269033	768.2591218123046	843.2406841217501	983.6621325546145	857.8888447194985	911.9383014090289	794.8940251260387	739.5615954934206	798.3852964444388	1.0071428081626328	0.9174335610749528	0.9622661204229344	1.056182632467146	1.2320644392316529	1.0745298648911186	1.1422283269372464	0.9956270846495442	0.926321662970265	1.0	9.640941341133736	-7.280278294519286	5.271268770436693	1.0724615188960451	0.957061610449562	0.22648201066081586	0.08188641608230952	0.24853830705986954	22.12690760561884	0.024568823464834952	0.038864994602939004	5.2447127302790976e-08	7.280278294519286	-0.11539990844648318	
HTVLYIS(ph)PPPEDLLDNSR	ddPTM_K562_Methotrexat_30min_R1	1	HTVLYISPPPEDLLDNSR	18	0	O94916-2;O94916;O94916-4;O94916-5	O94916-2	NFAT5	Nuclear factor of activated T-cells 5	1	HTVLYIS(1)PPPEDLLDNSR	97.352	0.00099198	16134000.0	2054.2	2180.9	3324.7	2512.7	2503.7	1989.4	1851.7	2565.8	1926.4	2565.4	True	False	1963.8998276296304	2541.2566560383616	2626.89090471375	2292.4154922184225	2832.980434676117	2373.823394465576	2266.9908612381837	2475.5593596907165	1836.8420844724549	2100.781200765736	0.9348426323092515	1.2096722186546949	1.2504352684402578	1.0912204904455713	1.3485366461026471	1.1299717427023415	1.0791180254335218	1.1783994253130092	0.8743614441156105	1.0	11.036710195836353	-9.75452351618398	24.993160093060403	0.9371806988044502	1.1591848118061365	0.38715022728260606	0.10826086846994931	139.0863559089379	502656.09421036113	0.07512041263603929	0.027009623347894796	1.7598533686554383e-10	9.75452351618398	0.22200411300168632	
HVDSLSQRS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	HVDSLSQRSPK	11	1	K7ENL0;K7EJV0;K7EPY1;Q9UHD8-7;Q9UHD8-2;Q9UHD8-5;Q9UHD8	K7ENL0	SEPT9	Septin-9	1	HVDS(0.006)LS(0.012)QRS(0.982)PK;HVDS(0.008)LS(0.036)QRS(0.955)PK	77.279	0.026983	259891000.0	5743.299999999999	4910.5	8331.2	7207.1	4360.4	4046.1000000000004	3524.0	4724.0	4752.1	7062.6	True	False	5490.831408833244	5721.876660771411	6582.594972584356	6575.2647327446175	4933.869028782095	4827.951561449264	4314.346705731688	4557.85424241131	4531.175908233778	5783.494702006742	0.9493968079417535	0.989345880923181	1.138169102203957	1.1369016609392153	0.8530947606937642	0.8347810122094645	0.7459757340548281	0.78807960882714	0.7834667690905919	1.0	12.497725795672814	-7.861362764220444	5.8776898451660395	0.8157698001735435	1.0541270712587725	0.6183946020479203	0.08396467214794484	0.1344102372513523	6.6739446067408075	0.026862887088951695	0.030689496327002085	1.3760595723594879e-08	7.861362764220444	0.23835727108522897	
HVEELLR	ddPTM_K562_Methotrexat_30min_R1	2	HVEELLR	7	0	K7EK35;P42229-2;P42229	K7EK35	STAT5A	Signal transducer and activator of transcription;Signal transducer and activator of transcription 5A	0	;	130.77	5.4369999999999997e-17	5840600.0	1985.43	1922.77	2248.5	1859.46	1860.08	1740.04	1905.65	2127.92	1829.58	1938.4	False	True	1898.1528744867567	2240.4750609981575	1776.5705775705683	1696.4440287978944	2104.713123350381	2076.2781036020315	2333.0405220708262	2053.079847483463	1744.5232251396967	1587.3369765199595	1.1958096501022881	1.4114678194608197	1.1192145107496205	1.0687359104537075	1.3259397056097721	1.3080260425571482	1.4697827597929014	1.2934114670374448	1.0990251288446318	1.0	10.63239271576374	-9.910161303069742	3.7278868868281703	1.0034860439412643	1.27577173426532	0.3876114189414821	0.11586943330282433	0.2272964175074549	5.824111375816117	0.11956956217517495	0.03169678511380539	1.2298119165594954e-10	9.910161303069742	0.2722856903240558	
HVEVSQAPLPPAPAYLS(ph)SPLALPSQR	ddPTM_K562_Methotrexat_30min_R1	2	HVEVSQAPLPPAPAYLSSPLALPSQR	26	0	A0A087X0G7;A0A087WUW6;A0A087X1B1;Q9Y6K9-3;Q9Y6K9;Q9Y6K9-2	A0A087X0G7	IKBKG	NF-kappa-B essential modulator	1	HVEVSQAPLPPAPAYLS(0.5)S(0.5)PLALPSQR;HVEVSQAPLPPAPAYLS(0.5)S(0.5)PLALPS(0.001)QR	143.13	5.7663e-18	39004000.0	2256.55	1988.53	2555.9	2502.7	1914.6299999999999	1888.95	1898.3	2303.09	2467.52	2398.8	True	False	2157.3547639166786	2317.1007832692762	2019.451518440122	2283.2921766924205	2166.4374044989145	2253.962853612019	2324.042097471754	2222.089019296161	2352.805533781911	1964.3540751527446	1.0982514767603324	1.1795738928019392	1.0280486313462063	1.1623628375219859	1.102875205596759	1.1474320653911414	1.183107529782298	1.1312059508026198	1.1977502241284892	1.0	10.939839283778177	-8.273773507488634	23.094443910047477	1.1433000523422292	1.115740083253948	0.0030104926595613257	0.06297403168079822	1036.6381118575491	1940993.3053736934	0.020650086703961942	0.018375032091328274	5.323858358254579e-09	8.273773507488634	-0.02755996908828129	
HVGDLGNVTADKDGVADVS(ph)IEDSVISLSGDHCIIGR	ddPTM_K562_Methotrexat_30min_R1	2	HVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGR	36	1	H7BYH4;P00441	H7BYH4	SOD1	Superoxide dismutase [Cu-Zn]	1	HVGDLGNVT(0.415)ADKDGVADVS(0.584)IEDS(0.001)VISLSGDHCIIGR;HVGDLGNVT(0.193)ADKDGVADVS(0.803)IEDS(0.004)VISLSGDHCIIGR	88.209	4.961899999999999e-10	23138700.0	2507.6	1591.33	3169.4	3192.9	1598.64	1799.76	1108.8	1791.52	1942.5	2670.3	True	False	2397.368906515461	1854.2702345148903	2504.18625241368	2912.983414297051	1808.8891808485946	2147.538148398192	1357.4766252313539	1728.5112261567972	1852.1935989865779	2186.6827942639534	1.096349645592938	0.8479831822790947	1.1451986813005495	1.3321472240684882	0.8272298047040125	0.9820986171526823	0.6207926585384261	0.7904718648223604	0.8470335084014936	1.0	11.094528239234972	-7.8170385451669215	24.99534815691151	0.8298114444445109	1.0898729237254372	0.4247642258705201	0.14765014719632877	87.59326605926975	39378.045832724354	0.04753058403861705	0.053894652253601474	1.5239174947428706e-08	7.8170385451669215	0.26006147928092627	
HVINFDLPSDIEEYVHR	ddPTM_K562_Methotrexat_30min_R1	2	HVINFDLPSDIEEYVHR	17	0	A0A2R8Y5G6;A0A2R8Y4A4;A0A2R8YFS5;A0A2R8YFR4;A0A2R8YCW1;A0A0D9SFB3;A0A2R8Y645;A0A2U3TZJ9;A0A0D9SG12;A0A2R8YF78;F6S8Q4;O00571;A0A2R8YDT5;A0A0J9YVQ7;A0A0D9SF53;O00571-2;A0A2R8Y7T2;O15523-2;O15523;A0A087WVZ1	A0A2R8Y5G6	DDX3X;DDX3Y	ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y	0	;	202.32	2.8451e-16	15135000.0	6848.1	4985.9	5277.7	7042.700000000001	4600.2	4248.2	4995.0	7019.5	7340.7	8608.6	False	True	6547.0657236834095	5809.73522919055	4169.982894037886	6425.2774254971455	5205.2069319794955	5069.104526173047	6115.255901001639	6772.620206309525	6999.432459243641	7049.499120960443	0.9287277877965632	0.8241344710457976	0.5915289614887924	0.9114516244697038	0.738379683813667	0.7190730063503318	0.8674738156671307	0.9607236046277859	0.992897841271029	1.0	12.783305039850484	-9.13818197659479	2.7071604293757945	0.9881155791832144	0.7823326827960952	0.485106756492375	0.09144836844909979	0.24920641132133645	3.5061719480093627	0.05251333797812561	0.026499585085309765	7.274749166026392e-10	9.13818197659479	-0.2057828963871191	
HVLPTTSLGHPSLS(ph)APALSSSSSSSSTSSPVLGAPSYPASTPGASPHHR	ddPTM_K562_Methotrexat_30min_R1	1	HVLPTTSLGHPSLSAPALSSSSSSSSTSSPVLGAPSYPASTPGASPHHR	49	0	Q53ET0;H0YDQ8;Q5T4K5	Q53ET0	CRTC2	CREB-regulated transcription coactivator 2	1	HVLPT(0.001)T(0.003)S(0.003)LGHPS(0.082)LS(0.533)APALS(0.072)S(0.072)S(0.072)S(0.072)S(0.028)S(0.011)S(0.01)S(0.01)T(0.01)S(0.01)S(0.01)PVLGAPSYPASTPGASPHHR	68.069	1.4228e-08	26954000.0	1492.8	952.22	1261.1	1540.0	993.82	1048.3	869.2	1306.5	1517.0	1301.6	True	False	1427.1782994282494	1109.5581700274427	996.4123439511868	1404.9905910042467	1124.524749606509	1250.8691386439436	1064.1402260561813	1260.5496544687505	1446.475001113327	1065.8676272381242	1.3389826869274126	1.0409905898939151	0.9348368582439173	1.3181661165982288	1.0550322768694806	1.1735689373409297	0.9983793473619056	1.1826512244631036	1.357086906618444	1.0	10.057812561984921	-9.50683773361609	24.61694828248742	1.2089853058102777	1.1172677048984823	0.02169724333771461	0.14676626935842682	1625.5723339777974	2494667.781144304	0.08006747009779965	0.03666385928718173	3.1128791916184374e-10	9.50683773361609	-0.09171760091179548	
HVS(ph)FQDEDEIVR	ddPTM_K562_Methotrexat_30min_R1	2	HVSFQDEDEIVR	12	0	Q7Z699	Q7Z699	SPRED1	Sprouty-related, EVH1 domain-containing protein 1	1	HVS(1)FQDEDEIVR;HVS(1)FQDEDEIVR	119.77	0.00098843	15390200.0	1679.51	1748.17	2477.48	1772.5	1612.7799999999997	1779.6100000000001	1619.6200000000001	1753.9099999999999	1636.8000000000002	2085.69	True	False	1605.6807513884924	2037.0253786907165	1957.4908047674144	1617.1076769837832	1824.888838693511	2123.494446076647	1982.8610134895437	1692.2239911743475	1560.7055252618939	1707.951330250678	0.9401209056424487	1.192671794922716	1.1461045581902567	0.9468113337552999	1.0684665343629376	1.2432991552311852	1.1609587336417349	0.9907916936520538	0.9137880556776915	1.0	10.738051149195192	-9.416751102524321	5.339607338501806	0.9554400206080396	1.1031119428352083	0.2933891206357899	0.09429294000173118	0.28345870712486426	11.616074513017141	0.05613728963407522	0.025834747229515165	3.830442059751169e-10	9.416751102524321	0.14767192222716874	
HVSGITLLS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	HVSGITLLSPK	11	0	A0A3B3IRJ5;Q9P2B7-2;Q9P2B7	A0A3B3IRJ5	CFAP97	Cilia- and flagella-associated protein 97	1	HVSGIT(0.003)LLS(0.996)PK;HVSGITLLS(1)PK	89.507	0.012676	13160800.0	12274.900000000001	9525.4	16371.3	14191.8	9768.7	8372.4	8036.9	10454.5	10784.0	12952.2	True	False	11735.310093550252	11099.310445883715	12935.187857051833	12947.626928190955	11053.455275081105	9990.247807290432	9839.379409561574	10086.809309332994	10282.654193807597	10606.431070615878	1.1064334473508084	1.0464698607841156	1.2195608278535424	1.2207336135961078	1.0421465242633468	0.9419047501253722	0.9276805123280961	0.951008802317827	0.9694735321756558	1.0	13.372651668894264	-8.000222491754188	4.383230907251062	0.9552878376209251	1.146009606792137	0.7551585268461287	0.050952397329739295	0.10746247472970516	5.137713285479131	0.018298455959151246	0.019773777365674636	9.994878250099043e-09	8.000222491754188	0.19072176917121197	
HVTLPSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	HVTLPSSPR	9	0	Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0	Q5T4S7-3	UBR4	E3 ubiquitin-protein ligase UBR4	1	HVTLPS(0.134)S(0.866)PR;HVTLPS(0.129)S(0.871)PR	128.6	0.0016445999999999998	945790000.0	8796.8	7382.8	9364.3	8893.2	7449.8	7249.6	6771.0	8217.7	7316.8	8250.0	True	False	8410.103204990906	8602.68221385667	7398.861400731191	8113.546963583741	8429.57927956629	8650.482598028364	8289.569110246664	7928.678833163302	6976.64356502702	6755.845055865494	1.2448632458924096	1.2733687855063716	1.0951792617427516	1.2009669991675542	1.2477460939172431	1.2804441970613174	1.2270217924920548	1.1736028235697238	1.0326825892742797	1.0	12.721920525220296	-9.730329974589898	2.6562716364053345	0.9990696620104884	1.2228580054705316	0.7397643549450816	0.04880613232171936	0.14537225929192987	1.9128766013310585	0.048154096568024995	0.013921650165710503	1.8606728703082623e-10	9.730329974589898	0.22378834346004317	
HVVRPPPRS(ph)PEPDTLPLAAGSDHPLPR	ddPTM_K562_Methotrexat_30min_R1	2	HVVRPPPRSPEPDTLPLAAGSDHPLPR	27	2	H3BVB1;H3BME1;H7C112;H3BPZ0;Q6PCT2-2;Q6PCT2-3;Q6PCT2	H3BVB1	FBXL19	F-box/LRR-repeat protein 19	1	HVVRPPPRS(0.995)PEPDT(0.005)LPLAAGSDHPLPR;HVVRPPPRS(0.996)PEPDT(0.004)LPLAAGSDHPLPR	73.127	8.199e-05	215412000.0	2100.3	1941.21	2763.1	2809.8	2484.8	2414.0	1826.65	2392.6000000000004	2378.3999999999996	2739.6	True	False	2007.973326828212	2261.9619575717497	2183.1630699956577	2563.46919649593	2811.5947533982576	2880.471335196493	2236.322761074004	2308.450901861409	2267.8287031298205	2243.431892733225	0.8950453692542686	1.0082596957360488	0.973135434629067	1.1426552349546908	1.2532561217950888	1.283957558295718	0.9968311355106217	1.0289819402758733	1.010874772029238	1.0	11.131491671258251	-7.249165211057162	18.928794007331813	1.113029025778428	0.9637574185576127	0.2971031395521667	0.10016215780269314	41.08468500430625	63353.15027113857	0.03024654621545692	0.0514891705417374	5.634232817842597e-08	7.249165211057162	-0.14927160722081545	
HWVAPGGPYSAETPGVPS(ph)PIAALK	ddPTM_K562_Methotrexat_30min_R1	2	HWVAPGGPYSAETPGVPSPIAALK	24	0	Q8IU81	Q8IU81	IRF2BP1	Interferon regulatory factor 2-binding protein 1	1	HWVAPGGPYSAET(0.141)PGVPS(0.859)PIAALK;HWVAPGGPYSAETPGVPS(1)PIAALK	97.08	2.7099e-06	24723000.0	6999.8	4344.2	7741.9	6719.9	4419.7	4181.4	3847.3	6222.5	6108.8	7558.4	True	False	6692.097173323866	5062.0052112255735	6116.980989323365	6130.776800317818	5000.968018188291	4989.396371578547	4710.154960545264	6003.651148053428	5824.803221358667	6189.500517606514	1.081201488599553	0.8178374324109525	0.9882834603411275	0.9905123657197132	0.8079760239073653	0.8061064632575475	0.7609911247518055	0.9699734463185805	0.9410780732289402	1.0	12.59560727570955	-6.246190850231111	24.028285047964616	0.8928786913144995	1.081201724375467	0.2822060278342333	0.08725799124993901	2275.0165805461265	3584820.776778283	0.022844821136970537	0.5012967607905556	5.672952533503732e-07	6.246190850231111	0.18832303306096754	
HYAHTDCPGHADYVK	ddPTM_K562_Methotrexat_30min_R1	2	HYAHTDCPGHADYVK	15	0	P49411	P49411	TUFM	Elongation factor Tu, mitochondrial	0	;	81.494	0.009712799999999999	10286400.0	3799.0	2512.5	4317.700000000001	3799.3	2353.6	2674.8	1988.1599999999999	2531.8	2567.5	3552.8	False	True	3632.000508794161	2927.6479198020925	3411.4737748616612	3466.221267793787	2663.1396537339556	3191.667244152267	2434.0554899169997	2442.7551589621	2448.137485404394	2909.3534926641128	1.2483874915688968	1.006288141741493	1.1725882686526874	1.1914060207994	0.9153716316869087	1.0970365932500137	0.836631057743389	0.8396212990691805	0.8414713067962805	1.0	11.506482882279506	-8.258301823617748	1.1170407163148608	0.869855435882613	1.1436529012551149	0.5522700155789648	0.09926208453004691	0.35564430517179285	0.9225566415921439	0.05102807870342981	0.04617172092029193	5.5169389279664705e-09	8.258301823617748	0.2737974653725018	
HYEDGYPGGSDNYGSLS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	HYEDGYPGGSDNYGSLSR	18	0	O60716;O60716-15;O60716-11;A0A669KB62;A0A669KB05;O60716-6;O60716-3;O60716-4;O60716-5;O60716-7;O60716-17;O60716-9;O60716-8;O60716-10;O60716-12;O60716-2;O60716-14;C9JZR2;O60716-13;O60716-18;O60716-22;O60716-19;O60716-21;O60716-23;O60716-24;O60716-16;O60716-20	O60716	CTNND1	Catenin delta-1	1	HYEDGYPGGSDNYGS(0.178)LS(0.822)R	96.46700000000001	0.0010474	16724000.0	1375.9	1110.4	1176.2	1439.1	857.5	801.22	1096.7	888.14	1293.6	1704.4	True	False	1315.4170834561428	1293.874726427162	929.3316937240398	1312.9363373468896	970.2762801992129	956.0444255120678	1342.662892217917	856.9036127974558	1233.4608183521432	1395.71664402632	0.942467146957185	0.9270325262401632	0.6658455336916616	0.9406897474256463	0.6951814212089569	0.6849846131762825	0.9619881642628011	0.6139524211200111	0.8837473018834925	1.0	10.446790362490612	-6.609609783830717	12.233159643531257	0.7941624130345603	0.9386031136408689	0.13052440938102405	0.13065364558416892	0.8413456848055739	113.25239560621853	0.030740466211293827	0.08137641674569164	2.4569154773690244e-07	6.609609783830717	0.14444070060630865	
HYGITS(ph)PISLAAPK	ddPTM_K562_Methotrexat_30min_R1	1	HYGITSPISLAAPK	14	0	G3V457;G3V3I9;A0A0C4DGK1;G3XAH6;P51003-2;P51003	G3V457	PAPOLA	Poly(A) polymerase alpha	1	HYGIT(0.023)S(0.901)PIS(0.076)LAAPK	198.37	6.620699999999998e-101	0.0	1880.4	1362.9	2219.6	2007.4	1303.9	945.78	924.41	1495.5	1662.6	1937.1	True	False	1797.7398675273857	1588.0960596610043	1753.7362926287012	1831.4143586895616	1475.3857046667683	1128.5385995866347	1131.7324739629478	1442.9024173425305	1585.3060888932218	1586.2724191172167	1.1333109280988782	1.0011496389408336	1.105570689809182	1.1545396217055641	0.9300960458531086	0.7114405987180201	0.7134540450452849	0.9096182975592089	0.9993908169792597	1.0	10.631424838780898	-7.927114880256636	5.180016619937687	0.848307226306508	1.0903858021558899	0.5396635118824482	0.10053758398744637	0.16124664760522936	7.9383000441484945	0.03355220483105563	0.038094217874029966	1.1827286571057578e-08	7.927114880256636	0.24207857584938186	
HYNGEAYEDDEHHPR	ddPTM_K562_Methotrexat_30min_R1	2	HYNGEAYEDDEHHPR	15	0	P31689	P31689	DNAJA1	DnaJ homolog subfamily A member 1	0	;	101.3	0.00097587	16506100.0	4643.7	3701.7	4303.9	5379.4	3381.7	2778.3	2739.0	2970.3	2934.6000000000004	2870.7	False	True	4439.568508209379	4313.343006858273	3400.570206273502	4907.796354057302	3826.452824197875	3315.1671543398575	3353.2904730417386	2865.832865417932	2798.171086530766	2350.788412348249	1.8885444920900414	1.8348495271633525	1.446565836555492	2.087723560435117	1.6277317023081441	1.4102363006921033	1.4264535487020162	1.21909434739607	1.19031175746507	1.0	11.198928976697212	-8.843135173539572	0.6814172924735962	1.034000279883161	1.823546361220354	0.7525895260061213	0.16226591272925087	0.3686814364426322	0.3372211812623429	0.14428678049853175	0.09098265719170782	1.4350427088347506e-09	8.843135173539572	0.7895460813371931	
IAASSS(ph)FR	ddPTM_K562_Methotrexat_30min_R1	2	IAASSSFR	8	0	Q99961-3;Q99961-2;Q99961	Q99961-3	SH3GL1	Endophilin-A2	1	IAAS(0.034)S(0.214)S(0.752)FR;IAAS(0.015)S(0.087)S(0.898)FR	109.48	0.01137	159087000.0	10643.3	8495.9	9466.0	10527.2	9323.9	8189.3	8488.8	9815.400000000001	10781.5	11678.7	True	False	10175.433275927573	9899.703069391677	7479.215960543917	9604.296720532402	10550.156278658238	9771.766323663891	10392.629487972516	9470.186818578319	10280.270418261929	9563.574261083191	1.0639780690922436	1.0351467766268398	0.7820523746000384	1.004258079493869	1.1031603865502169	1.0217692733801305	1.0866888471042648	0.9902350899407043	1.0749401988851774	1.0	13.223334192096077	-7.520604209115744	24.96611117419878	1.0471133295839148	0.9554157464853867	0.1982562891905837	0.0773153437292598	134.20174503185987	1473054.3218770635	0.023071662743645013	0.030293788962328233	3.0157531552928845e-08	7.520604209115744	-0.09169758309852805	
IAATT(ph)GNGQPR	ddPTM_K562_Methotrexat_30min_R1	1	IAATTGNGQPR	11	0	Q9UG54;O43318-4;O43318-2	Q9UG54	DKFZp586F0420;MAP3K7	Mitogen-activated protein kinase kinase kinase 7	1	IAAT(0.191)T(0.809)GNGQPR	103.43	0.011195	4573000.0	358.71	361.83	552.35	426.94	343.81	489.67	414.22	396.98	359.68	398.78	True	False	342.9415379072263	421.6162574415887	436.4192833093636	389.5108330671125	389.0270412773079	584.2917973097206	507.1193792418213	383.01798838959377	342.9585553068171	326.5570777427928	1.0501733426746869	1.2910951443951482	1.336425737044052	1.1927802507281873	1.19129875844773	1.7892486096103795	1.5529272332637831	1.1728975254098504	1.050225454237261	1.0	8.351191367088823	-9.51431408400346	5.23516048669361	1.0456524806580454	1.3483320595612789	0.3027826372547233	0.1949500194996469	0.23725827908759178	20.73921037744063	0.13707335676599788	0.05578529356861073	3.059749806533478e-10	9.51431408400346	0.3026795789032335	
IACDEEFS(ph)DS(ph)EDEGEGGRR	ddPTM_K562_Methotrexat_30min_R1	1	IACDEEFSDSEDEGEGGRR	19	1	Q92769-3;Q92769	Q92769-3	HDAC2	Histone deacetylase 2	2	IACDEEFS(1)DS(1)EDEGEGGRR	74.786	0.01075	0.0	930.96	727.77	1116.6	787.16	784.56	1059.2	726.95	931.96	766.22	1078.4	True	False	890.0361131000291	848.0216225251221	882.2409192418487	718.1509049447423	887.7433917120636	1263.875409378676	889.987042489117	899.1824385600432	730.5985994416968	883.0913100903454	1.0078641958428662	0.9602875861595384	0.9990370295361534	0.8132238385080148	1.005267950854643	1.4311944811792727	1.0078086289831865	1.0182213642981626	0.8273194301583064	1.0	9.786418807494252	-8.002041833809603	24.995531170772328	1.0731179998601206	0.9449408887417851	0.10495042687478007	0.1502436478639355	175.4437284739354	2147777.7078248546	0.04916137258477187	0.05490082525246153	9.953095386403663e-09	8.002041833809603	-0.12817711111833552	
IACDEEFS(ph)DSEDEGEGGRR	ddPTM_K562_Methotrexat_30min_R1	2	IACDEEFSDSEDEGEGGRR	19	1	Q92769-3;Q92769	Q92769-3	HDAC2	Histone deacetylase 2	1	IACDEEFS(0.981)DS(0.019)EDEGEGGRR;IACDEEFS(0.995)DS(0.005)EDEGEGGRR	102.07	0.00041031	48781000.0	2194.2	2064.08	3801.5	2222.34	2488.4	1958.69	2030.62	2525.2	2250.5299999999997	2643.6	True	False	2097.7455952608952	2405.1341366388483	3003.6171005712768	2027.510902605439	2815.6682164987988	2337.1791215973562	2486.0382257641545	2436.387284703014	2145.903351519826	2164.818422992244	0.9690168805757668	1.1110096399283393	1.3874683754860293	0.9365731929622917	1.3006486763942726	1.0796190095088312	1.1483818685947413	1.125446484946023	0.9912625136263054	1.0	11.080030306734432	-9.73989639496526	5.5156574704931405	0.9936509504800909	1.1386002535920228	0.1545115501452402	0.1273662462083608	0.2833209334182995	24.88811500048273	0.09522036766431682	0.031038402925053606	1.8201350171547961e-10	9.73989639496526	0.14494930311193188	
IACKS(ph)PPPESVDTPTSTK	ddPTM_K562_Methotrexat_30min_R1	2	IACKSPPPESVDTPTSTK	18	1	P46013;P46013-2	P46013	MKI67	Antigen KI-67	1	IACKS(0.944)PPPES(0.053)VDT(0.003)PTSTK;IACKS(0.996)PPPES(0.003)VDT(0.001)PTSTK	104.3	0.00055778	69105000.0	6346.4	3567.6	9970.2	6154.5	3196.8	2685.0	2998.1	4544.2	4784.8	6705.0	True	False	6067.4198549647945	4157.085261168535	7877.5912708446	5614.944540477686	3617.2352332837822	3203.8382497939415	3670.500243602205	4384.377910322918	4562.35569237116	5490.659527221588	1.1050439068173403	0.7571194754580102	1.4347258706880446	1.0226357166456812	0.658797948652663	0.583506996547492	0.6684989709168091	0.7985157135652015	0.8309303590492028	1.0	12.422763737991591	-7.678999500948333	5.713610914016174	0.7341871157493347	1.0889157137082448	0.4180222748643547	0.1866271858381897	0.19572412532116168	10.38192759672081	0.05579219789450766	0.0719586381161638	2.094114862215598e-08	7.678999500948333	0.3547285979589101	
IADPEHDHTGFLTEY(ph)VATR	ddPTM_K562_Methotrexat_30min_R1	1	IADPEHDHTGFLTEYVATR	19	0	B3KR49;E9PJF0;E9PQW4;P27361-2;P27361-3;P27361	B3KR49	MAPK3	Mitogen-activated protein kinase;Mitogen-activated protein kinase 3	1	IADPEHDHTGFLT(0.352)EY(0.502)VAT(0.146)R	129.42	6.753900000000001e-07	14952000.0	1388.9	1110.4	1694.2	878.71	874.33	1053.4	854.33	1508.6	1092.9	1693.1	True	False	1327.8456190219026	1293.874726427162	1338.6105726128783	801.6748585852865	989.3197201942603	1256.9546414647816	1045.935250030576	1455.5416829173798	1042.0913175456533	1386.4631835255586	0.9577215138489283	0.9332196785327117	0.9654858408926528	0.5782157565459134	0.7135564304553513	0.9065907096563091	0.7543909297114739	1.0498235367607565	0.7516184561755028	1.0	10.437193591879502	-11.137136965841565	23.717380433842013	0.9999999999999949	0.8450926894204103	0.10331526793760804	0.13643026855769283	0.0	0.0	0.13625355321605465	0.033046340692677076	7.292274934966015e-12	11.137136965841565	-0.15490731057958462	
IAELLS(ph)PGSVDPLTR	ddPTM_K562_Methotrexat_30min_R1	1	IAELLSPGSVDPLTR	15	0	A0A2R8Y6A7;A0A2R8YD12;A0A024QZX5;A0A087X1N8;P35237	A0A2R8Y6A7	SERPINB6	Serpin B6	1	IAELLS(0.994)PGS(0.006)VDPLTR	107.11	0.0015852	10259000.0	1010.2	940.09	851.46	1107.0	936.31	698.5	862.45	1017.8	1000.6	1231.7	True	False	965.7928175793262	1095.4238937021885	672.7501818893646	1009.9510287283771	1059.4511765753057	833.4752392853147	1055.8763667305027	982.0033971054683	954.0823243994693	1008.6271945829724	0.9575320026728443	1.086054291997454	0.6669958786581403	1.0013125108588332	1.0503892640068535	0.8263461899120457	1.0468450309502768	0.9736039265840815	0.9459216740571275	1.0	9.978177313504506	-8.82172028395482	24.999999804654585	0.9893926222883869	0.935023348747473	0.061867191441485336	0.11411507472937521	271.6469220182209	112655.15937363103	0.04794652030138761	0.03232555127734612	1.5075777391508e-09	8.82172028395482	-0.05436927354091392	
IAGEASR	ddPTM_K562_Methotrexat_30min_R1	1	IAGEASR	7	0	Q5QNW6;O60814;P57053;P58876;P62807;Q16778;U3KQK0;P23527;Q93079;Q99877;Q99879;P06899;P33778;Q5QNW6-2;Q6DRA6;Q6DN03	Q5QNW6	HIST2H2BF;HIST1H2BK;H2BFS;HIST1H2BD;HIST1H2BC;HIST2H2BE;HIST1H2BN;HIST1H2BO;HIST1H2BH;HIST1H2BM;HIST1H2BJ;HIST1H2BB;HIST2H2BD;HIST2H2BC	Histone H2B type 2-F;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-D;Histone H2B type 1-C/E/F/G/I;Histone H2B type 2-E;Histone H2B;Histone H2B type 1-O;Histone H2B type 1-H;Histone H2B type 1-N;Histone H2B type 1-M;Histone H2B type 1-J;Histone H2B type 1-B;Putative histone H2B type 2-D;Putative histone H2B type 2-C	0		114.59	2.5141e-07	0.0	1395.1	1173.2	1563.6	1690.4	1509.0	1431.9	1453.8	1639.1	1324.3	1525.1	False	True	1333.7730744455725	1367.051359009678	1235.4217278582796	1542.2052565153117	1707.459949645028	1708.5944096387138	1779.8516574326688	1581.4519239492756	1262.7335820529859	1248.889611478843	1.0679671463246594	1.0946134441705513	0.9892161136606655	1.2348611457253982	1.3671824426685555	1.3680908175827664	1.425147299708178	1.2662863950614793	1.011085023405511	1.0	10.286430248389266	-7.362481841874878	5.518207702700778	1.2709131845561559	1.055957518245303	0.2640054756369762	0.13782094882066548	0.26857334014872225	11.920369418367509	0.039881501113944624	0.05980344393895153	4.3402841026588e-08	7.362481841874878	-0.21495566631085294	
IAHFLDR	ddPTM_K562_Methotrexat_30min_R1	1	IAHFLDR	7	0	P60228;H0YBR5;E5RIP5;E5RJ25;E5RII3;E5RHS5	P60228	EIF3E	Eukaryotic translation initiation factor 3 subunit E	0		107.32	0.016645	5614800.0	3568.4	2677.9	3377.8	3513.6	2868.6	2642.9	2983.4	3772.5	4594.0	4895.3	False	True	3411.5374086815154	3120.377458482794	2668.845940368187	3205.5681432159245	3245.8711806174474	3153.603020625853	3652.503394404062	3639.819036726646	4380.42594272553	4008.7137335731336	0.8510304390432664	0.7783986749538914	0.6657611687301336	0.7996500514290074	0.8097039091200626	0.7866870099040261	0.9111409886453612	0.9079767922171693	1.0927260547539956	1.0	11.96892368147223	-9.152703509464382	1.1773237804361931	1.0379706160883118	0.7720081855222252	0.7627749425673622	0.0565264238316517	0.23551805533071732	0.5878946860792937	0.04675425530808015	0.01939111038930619	7.0355246750003e-10	9.152703509464382	-0.2659624305660866	
IALEARPLLSQEDS(ph)EEEENELEAINRK	ddPTM_K562_Methotrexat_30min_R1	1	IALEARPLLSQEDSEEEENELEAINRK	27	2	Q9H1H9-3;Q9H1H9-4;Q9H1H9-2	Q9H1H9-3			1	IALEARPLLS(0.003)QEDS(0.997)EEEENELEAINRK	69.08800000000001	0.00029626	23759000.0	2156.5	1309.9	2713.9	2397.1	1629.9	1383.6	1333.5	1940.5	1575.4	2262.4	True	False	2061.7028421201917	1526.3387105069692	2144.289477637878	2186.9499647378443	1844.260418771659	1650.9611182178396	1632.5713201172532	1872.2515151141306	1502.1599978602087	1852.657436895767	1.1128354336108095	0.8238645094931508	1.157412824915305	1.1804394709915738	0.9954675818870338	0.891131347511345	0.881205174580315	1.0105762014218855	0.8108136819816854	1.0	10.855380431121791	-8.002386514377237	24.905223457867347	0.9199755172856645	1.061302572374261	0.30906255014092343	0.10551165074914688	122.92056322778146	1282801.0639394359	0.033568878411994886	0.037445381822994526	9.945199183029078e-09	8.002386514377237	0.14132705508859655	
IALESEGRPEEQMES(ph)DNCSGGDDDWTHLSSK	ddPTM_K562_Methotrexat_30min_R1	1	IALESEGRPEEQMESDNCSGGDDDWTHLSSK	31	1	Q13501;Q13501-2	Q13501	SQSTM1	Sequestosome-1	1	IALESEGRPEEQMES(0.5)DNCS(0.5)GGDDDWTHLSSK	77.169	4.3324e-06	51882000.0	5804.8	3825.6	7362.6	5738.1	3986.5	3420.2	3746.6	4892.6	4919.8	6382.1	True	False	5549.627942471268	4457.715375918365	5817.290875882177	5235.049681974979	4510.794625089405	4081.1052446723456	4586.870422160709	4720.524484847922	4691.07957183741	5226.239846186561	1.0618777755714128	0.8529488709116618	1.113092978334488	1.0016856929738587	0.8631051688874943	0.7808874764234581	0.8776616759193739	0.9032353324335765	0.8976012792945883	1.0	12.351557619990476	-7.7570630512659084	24.399728475459085	0.8764628552270811	1.00391845328103	0.34772390941301823	0.07988410701700845	88.791615402711	495042.39062772354	0.02354116471482351	0.029320624938581178	1.7495926627391348e-08	7.7570630512659084	0.1274555980539488	
IALESEGRPEEQMESDNCS(ph)GGDDDWTHLSSK	ddPTM_K562_Methotrexat_30min_R1	1	IALESEGRPEEQMESDNCSGGDDDWTHLSSK	31	1	Q13501;Q13501-2	Q13501	SQSTM1	Sequestosome-1	1	IALESEGRPEEQMES(0.191)DNCS(0.809)GGDDDWTHLSSK	83.435	4.0586e-06	60362000.0	2750.9	1918.3	3999.5	3168.7	2221.2	1919.7	1846.0	2624.1	2668.6	3722.3	True	False	2629.973729834654	2235.2664694751647	3160.0596064013753	2890.9049907241288	2513.3267330361423	2290.6548559141265	2260.0124911409453	2531.808915645962	2544.53736847134	3048.155400175528	0.8628082838831665	0.7333177532045928	1.0367121066791423	0.9484112885313052	0.8245402228808323	0.7514888695577067	0.7414361128080289	0.8306036219479386	0.8347794106313651	1.0	11.573720740428875	-7.903330311889514	8.221349505139314	0.8124552594671972	0.8935971055070804	0.08014698141183974	0.09741291549190396	0.5415900745156579	40.88262101593097	0.03091515280930979	0.035103692407387824	1.2493084806918812e-08	7.903330311889514	0.08114184603988317	
IALPAPRGS(ph)GTASDDEFENLR	ddPTM_K562_Methotrexat_30min_R1	2	IALPAPRGSGTASDDEFENLR	21	1	Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7	Q7Z6Z7-2	HUWE1	E3 ubiquitin-protein ligase HUWE1	1	IALPAPRGS(0.941)GT(0.045)AS(0.014)DDEFENLR;IALPAPRGS(0.984)GT(0.009)AS(0.007)DDEFENLR	64.152	0.010472	40880000.0	1506.83	1502.29	1726.25	2142.8	1605.99	1356.16	1584.62	1551.5700000000002	1300.4099999999999	1884.21	True	False	1440.5915574272979	1750.5178879361126	1363.9337156020433	1954.944050911622	1817.2058346788742	1618.2187265700381	1940.0113725415847	1497.0004036617524	1239.9542229385506	1542.9613106317952	0.9336537134799705	1.134518329056047	0.8839714296164396	1.2670078228410877	1.1777390801424465	1.0487746616974	1.2573298884255302	0.9702125343951604	0.8036197760725624	1.0	10.591486171807652	-9.51244976262046	24.30439458972515	0.8968452564522661	1.1017335285245098	0.30323520133593296	0.12497407548579303	398.7707791972753	929338.41948367	0.07363987533816914	0.03160771806303613	3.072912806483021e-10	9.51244976262046	0.2048882720722437	
IAQSDYIPT(ph)QQDVLRT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	IAQSDYIPTQQDVLRTR	17	1	P04899-6;P04899-3;P04899-5;P04899-2;P04899;P04899-4	P04899-6	GNAI2	Guanine nucleotide-binding protein G(i) subunit alpha-2	2	IAQS(0.012)DY(0.007)IPT(0.989)QQDVLRT(0.992)R	69.815	0.026823000000000003	12485000.0	75.499	162.19	200.76	329.37	167.22	253.76	242.32	210.27	268.65	306.63	True	False	72.18015435995007	188.98914074137372	158.6232195477284	300.4946434799146	189.21236102030593	302.79552859132633	296.6664284145582	202.87468491782943	256.1605201378347	251.09633569454965	0.2874600067750683	0.7526559088113206	0.6317225582323442	1.1967305004620072	0.7535448914335273	1.2058938564506454	1.1814844991423652	0.8079555775143599	1.020168292895542	1.0	7.972097164963689	-6.314267281321088	0.9276501768652053	1.0233981883271326	9.923530648031088e-13	0.6312713929929136	0.16974956054305282	1.2720819332788604	0.9201651441876297	0.05765004036205245	1.2965085846261366	4.849899270711941e-07	6.314267281321088	-1.0233981883261403	
IAQVS(ph)PGPR	ddPTM_K562_Methotrexat_30min_R1	3	IAQVSPGPR	9	0	Q9NQS7;Q9NQS7-2	Q9NQS7	INCENP	Inner centromere protein	1	IAQVS(1)PGPR;IAQVS(1)PGPR;IAQVS(1)PGPR	114.76	0.0024324999999999998	167727200.0	9383.699999999999	7773.299999999999	10360.4	9821.400000000001	8414.4	7542.700000000001	7070.299999999999	9439.0	9816.7	10861.0	True	False	8971.20378372512	9057.70570149158	8185.893623243103	8960.373110707216	9521.04108700671	9000.22002484945	8655.9947541245	9107.025019923873	9360.323759676463	8893.967654758188	1.0086841027497566	1.0184100114919796	0.9203871591396814	1.007466347813116	1.0705054770367919	1.011946565831552	0.973243336397072	1.0239552664722928	1.0524351024223457	1.0	13.118611442622836	-7.5133631402802505	24.980030721450127	1.0219715563139153	0.9823922779772806	0.20556767771503237	0.03475394263244038	741.1742110427884	1945707.060150353	0.010446066158096023	0.014327662360875633	3.066456863259839e-08	7.5133631402802505	-0.03957927833663477	
IAS(ph)PVSR	ddPTM_K562_Methotrexat_30min_R1	2	IASPVSR	7	0	A0A087WU64;A6NMQ1;P09884	A0A087WU64	POLA1	DNA polymerase;DNA polymerase alpha catalytic subunit	1	IAS(0.992)PVS(0.008)R;IAS(0.977)PVS(0.023)R	95.815	0.009430299999999999	17864000.0	935.74	1161.9499999999998	1848.2	1828.63	1365.3899999999999	1179.8400000000001	1163.01	1186.9899999999998	1454.2600000000002	1459.21	True	False	894.6059900234393	1353.9424877269812	1460.2880771473974	1668.3168470312307	1544.9627174591296	1407.8273819876665	1423.8445976824653	1145.242888907663	1386.651770019161	1194.9329289659972	0.7486662793681335	1.1330698609992935	1.2220669811242193	1.39615940492565	1.2929283979110202	1.1781643537147242	1.1915686338266287	0.9584160425628807	1.1604431817098408	1.0	10.222713927333613	-9.238278282035736	23.436456275302195	1.044572203948454	1.1811638967087597	0.1047958217207573	0.1651386015187168	785.7303975255696	795073.2786595273	0.0820929127351067	0.047343845909544824	5.777257405718711e-10	9.238278282035736	0.1365916927603057	
ICQDMKEPEDNS(ph)PNTCQVISVIQDHPFK	ddPTM_K562_Methotrexat_30min_R1	1	ICQDMKEPEDNSPNTCQVISVIQDHPFK	28	1	Q9BXL5	Q9BXL5	HEMGN	Hemogen	1	ICQDMKEPEDNS(0.917)PNT(0.083)CQVISVIQDHPFK	67.47800000000001	0.00021289	13341000.0	2212.9	1456.2	2969.7	2140.5	1340.8	1181.9	1188.7	1538.7	1353.6	2346.8	True	False	2115.6235656516455	1696.8122988321622	2346.400553351708	1952.8456883406418	1517.1387014473532	1410.2854478329468	1455.2962341382672	1484.5830488565375	1290.6714314482535	1921.771779043047	1.1008713879153371	0.8829416257101538	1.2209569205559394	1.0161694066051215	0.7894479032275195	0.7338464760551346	0.7572679805210466	0.7725074668313585	0.671604945770901	1.0	10.908221302983758	-7.7407560573100085	4.433830137439691	0.7699087023712509	1.0594750952155565	0.5826736585448626	0.111044441248038	0.13288101825966367	6.116106181551765	0.03247761744257463	0.04050949681692288	1.8165357222013144e-08	7.7407560573100085	0.28956639284430563	
ICTLPSPPS(ph)PLASLAPVADSSTR	ddPTM_K562_Methotrexat_30min_R1	2	ICTLPSPPSPLASLAPVADSSTR	23	0	Q9UER7-2;Q9UER7;Q9UER7-3	Q9UER7-2	DAXX	Death domain-associated protein 6	1	ICT(0.004)LPS(0.077)PPS(0.916)PLAS(0.002)LAPVADSSTR;ICT(0.021)LPS(0.42)PPS(0.558)PLAS(0.001)LAPVADSSTR	73.60300000000001	0.0015172	12638300.0	3742.3	3553.8999999999996	4408.1	3663.0	3464.9	3477.0	3413.9	4142.5	4162.4	4559.7	True	False	3577.792972903495	4141.121569028719	3482.900050250754	3341.870477174387	3920.595082521579	4148.881040794615	4179.553978063965	3996.805927008647	3968.8909325208415	3733.894145603623	0.9581934659599481	1.1090623910440993	0.9327795364396188	0.8950094316704681	1.050001668402352	1.1111405088115867	1.119355240154591	1.0704122214376597	1.0629361138140214	1.0	11.86646531298212	-7.985112331170223	24.795234493433078	1.0801356675306315	0.9794991894222523	0.37784162402467913	0.05989438415147903	235.20764130135944	391732.96352105343	0.0192149689766252	0.021779591979707035	1.0348744596298569e-08	7.985112331170223	-0.10063647810837917	
IDASKNEEDEGHSNS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	3	IDASKNEEDEGHSNSSPR	18	1	D6RAF8;Q14103-3;Q14103;D6RD83	D6RAF8	HNRNPD	Heterogeneous nuclear ribonucleoprotein D0	1	IDASKNEEDEGHS(0.002)NS(0.623)S(0.375)PR;IDASKNEEDEGHS(0.068)NS(0.792)S(0.141)PR;IDASKNEEDEGHS(0.231)NS(0.761)S(0.008)PR	168.16	1.4638e-11	1150763600.0	7723.53	5653.32	12036.599999999999	7409.740000000001	6507.02	5406.57	4576.9400000000005	6997.4	8014.92	9414.3	True	False	7384.012869093701	6587.435039990275	9510.282149871424	6760.139598563508	7362.807184585282	6451.313134520835	5603.435304010102	6751.297475835924	7642.308118604635	7709.279043567813	0.9578084834345832	0.8544813338267291	1.2336149847638822	0.8768835010848112	0.9550578131853189	0.8368244420862475	0.7268429735573384	0.8757365556081183	0.9913129457910783	1.0	12.91238023314184														
IDASKNEEDEGHSNSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	5	IDASKNEEDEGHSNSSPR	18	1	D6RAF8;Q14103-3;Q14103;D6RD83	D6RAF8	HNRNPD	Heterogeneous nuclear ribonucleoprotein D0	1	IDASKNEEDEGHSNS(0.058)S(0.942)PR;IDASKNEEDEGHSNS(0.055)S(0.945)PR;IDASKNEEDEGHS(0.001)NS(0.069)S(0.93)PR;IDASKNEEDEGHS(0.002)NS(0.062)S(0.936)PR;IDASKNEEDEGHS(0.001)NS(0.015)S(0.985)PR	141.74	3.3229e-09	1622372000.0	16165.9	10754.199999999999	24711.4	15363.5	11260.4	9784.900000000001	9351.7	13579.3	13747.2	16899.4	True	False	15455.266392502108	12531.148759854983	19524.814841261887	14016.60580837256	12741.339971492971	11675.693441493026	11449.056778658058	13101.708322179491	13108.095672580843	13838.754901465845	1.1168104719352343	0.9055112868953004	1.4108794454617992	1.0128516552372697	0.9206998795927347	0.8436953703296167	0.8273184155783652	0.946740397923495	0.9472019532040697	1.0	13.756426526405132	-7.517500830167703	13.645255685658668	0.9094471295057787	1.135734186384624	0.4119610399810022	0.1229946077647978	0.665643050107994	1679.0973866151903	0.03574243851104633	0.04843974717756708	3.037380285891621e-08	7.517500830167703	0.22628705687884532	
IDDRDS(ph)DEEGASDR	ddPTM_K562_Methotrexat_30min_R1	2	IDDRDSDEEGASDR	14	1	Q8TDD1-2;Q8TDD1	Q8TDD1-2	DDX54	ATP-dependent RNA helicase DDX54	1	IDDRDS(0.999)DEEGAS(0.001)DR;IDDRDS(1)DEEGASDR	202.34	3.0605e-12	30767200.0	4446.799999999999	4028.7	6558.200000000001	4460.200000000001	3724.0	3442.3	3700.1000000000004	4216.2	4104.0	4944.6	True	False	4251.323996447977	4694.374198808631	5181.72344310576	4069.1811909072335	4213.771274008012	4107.475756895976	4529.9416134727035	4067.913856235091	3913.205935773957	4049.0850258463647	1.0499468322622687	1.1593666640347677	1.2797270025276006	1.004963137334136	1.0406724598546122	1.01442072237972	1.1187568511297998	1.0046501444816636	0.9664420259873389	1.0	11.983380222830561	-7.2917542530170465	24.98788531008197	1.0261756626361884	1.162648850105895	0.5087333814479307	0.06364434517919988	559.1128834109038	460862.9326016519	0.01831597825788557	0.027169825732166652	5.107939526792395e-08	7.2917542530170465	0.1364731874697065	
IDEDGENTQIEDTEPMS(ph)PVLNSK	ddPTM_K562_Methotrexat_30min_R1	1	IDEDGENTQIEDTEPMSPVLNSK	23	0	A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	IDEDGENTQIEDT(0.001)EPMS(0.944)PVLNS(0.055)K	91.565	0.0028805	0.0	976.58	749.68	1493.9	1087.6	633.24	787.73	833.73	913.79	903.68	1178.8	True	False	933.6507125238752	873.5518776187987	1180.3508053514222	992.2517966079346	716.5221593858308	939.9476739330288	1020.7151756440634	881.6514877588974	861.6681140448856	965.307897194453	0.9672050909739934	0.9049463701246704	1.2227713134658533	1.0279122334871502	0.7422731767432061	0.9737283582418309	1.0573985550212992	0.9133370713337242	0.8926355171745891	1.0	9.914845371436392	-7.5647988493991045	24.999608865344392	0.9296712318757282	1.0367008590838263	0.17240445809686455	0.10805972251991337	258.3975093007088	154097.3859443111	0.03314522683385411	0.04279033425043559	2.723962663859413e-08	7.5647988493991045	0.10702962720809805	
IDFDSVSSIMASS(ph)Q	ddPTM_K562_Methotrexat_30min_R1	3	IDFDSVSSIMASSQ	14	0	K7EK53;A0A087WVB9;K7ERF1;Q9UBQ5	K7EK53	EIF3K	Eukaryotic translation initiation factor 3 subunit K	1	IDFDSVSSIMAS(0.059)S(0.941)Q;IDFDSVSSIMAS(0.077)S(0.923)Q;IDFDSVSSIMAS(0.237)S(0.763)Q	177.42	0.00012181	22669000.0	5818.62	4763.889999999999	6443.530000000001	6022.81	4786.040000000001	4943.09	4565.99	6404.449999999999	5497.139999999999	6390.77	True	False	5562.840431818867	5551.041850215318	5091.121109047494	5494.799598315772	5415.488149369845	5898.272184049887	5590.029487770667	6179.2018634231845	5241.579161252545	5233.339625172545	1.0629618618790593	1.0607073585506688	0.9728245200366942	1.0499604443567152	1.034805408638331	1.127057024099677	1.0681572166427784	1.1807377900148137	1.00157443175298	1.0	12.353516172441967	-8.217253905589663	21.051481158857545	1.0863421307354835	1.034848243545289	0.09481898307353454	0.05574392721926279	133.16443732595576	63443.075559599725	0.017509977006328066	0.017509548038654132	6.0638171140247e-09	8.217253905589663	-0.05149388719019443	
IDFIPVS(ph)PAPS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	2	IDFIPVSPAPSPTR	14	0	Q96E09	Q96E09	FAM122A	Protein FAM122A	2	IDFIPVS(0.996)PAPS(0.863)PT(0.141)R;IDFIPVS(1)PAPS(0.959)PT(0.042)R	116.0	0.0025565	10170600.0	6322.1	6264.4	9645.599999999999	8197.1	5888.0	6194.8	6411.9	6187.4	5709.6	6558.299999999999	True	False	6044.188053868794	7299.485623406255	7621.120374923141	7478.472969818777	6662.375204446604	7391.857426377479	7849.931794120602	5969.785634948292	5444.161942225874	5370.528318773653	1.1254363993836958	1.359174589563113	1.419063437070453	1.3925022876569557	1.240543724749959	1.376374350459694	1.46166844827533	1.1115825633168763	1.013710685258808	1.0	12.390848303111726	-9.439650305302797	4.628746669410563	1.0206323942025954	1.342027096073456	0.6989701699441635	0.09093232061933797	0.12275005175375413	4.6090141702831655	0.055603724083025566	0.024617683962747123	3.633705236046234e-10	9.439650305302797	0.3213947018708605	
IDFIPVSPAPS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	2	IDFIPVSPAPSPTR	14	0	Q96E09	Q96E09	FAM122A	Protein FAM122A	1	IDFIPVSPAPS(0.934)PT(0.066)R;IDFIPVSPAPS(0.977)PT(0.023)R	182.37	1.0128e-05	11162200.0	5207.3	4498.9	5988.7	5883.7	4650.2	4715.4	3837.3999999999996	5082.1	3912.7	4911.2	True	False	4978.393327044963	5242.266756775178	4731.75371042778	5367.885156033563	5261.7828083759505	5626.584313995666	4698.03463353427	4903.3596624383	3730.7994310191953	4021.7340894989798	1.2378723247874308	1.303484178743466	1.1765456405441397	1.334719063114957	1.3083368246833678	1.3990443397754861	1.1681614271319323	1.2192152820946827	0.9276593996506545	1.0	11.97360198081473	-9.647895101398797	2.8356287338375723	0.9586885467784548	1.2790974461996312	0.7499196521718782	0.07022299463167905	0.12969141567961093	1.9457878201579828	0.06108965002577799	0.018743419500279163	2.2495979034977328e-10	9.647895101398797	0.32040889942117634	
IDFSSIAVPGTSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	IDFSSIAVPGTSSPR	15	0	Q5TDH0-2;Q5TDH0;Q5TDH0-3	Q5TDH0-2	DDI2	Protein DDI1 homolog 2	1	IDFSSIAVPGT(0.001)S(0.046)S(0.953)PR;IDFSSIAVPGT(0.009)S(0.178)S(0.813)PR	236.31	3.0775e-48	297110000.0	10832.8	9008.7	11322.900000000001	10213.4	9035.2	8776.5	8339.3	9934.8	9972.4	11594.5	True	False	10356.603082828473	10497.23455328204	8946.378026583854	9318.007079326477	10223.487168345102	10472.43441315328	10209.600307351939	9585.387452901752	9508.785300660871	9494.623696997876	1.0907860504364326	1.1055977454484247	0.9422572512708036	0.9813982498614195	1.076765914543584	1.1029857261709677	1.075303311976454	1.0095594895385454	1.0014915392241899	1.0	13.212895107445163	-11.158770968208131	0.006222101159794427	5.6606992108872926e-08	2.038766769419644	0.0884286126487247	0.05266420498296598	31620.880359027295	54.70111713437993	9183.90772716759	8739.68036706648	6.937915910910369e-12	11.158770968208131	2.038766712812652	
IDGATQSS(ph)PAEPK	ddPTM_K562_Methotrexat_30min_R1	1	IDGATQSSPAEPK	13	0	Q32MZ4-3;Q32MZ4-2;Q32MZ4	Q32MZ4-3	LRRFIP1	Leucine-rich repeat flightless-interacting protein 1	1	IDGATQS(0.227)S(0.773)PAEPK	149.82	5.506699999999999e-22	0.0	3625.1	2828.9	5795.9	3694.4	2612.1	2686.3	2055.6	3641.6	3147.3	4658.2	True	False	3465.7449445721777	3296.3276419216477	4579.419795659889	3370.51768792603	2955.6369347036334	3205.389456395332	2516.620626646439	3513.522863921472	3000.982709956477	3814.5548411191044	0.9085581644319488	0.8641447768396953	1.200512244914112	0.8835939784096002	0.7748314175072959	0.8403049870571381	0.659741629486737	0.9210833269579324	0.7867189842461555	1.0	11.897298988908661	-7.514173538462807	24.76383337717648	0.8194361800066048	0.9889913809637546	0.26826443873079686	0.11778393126953676	447.3663888534875	1272631.335350657	0.03334361817152068	0.04536981979271089	3.06074015708977e-08	7.514173538462807	0.16955520095714982	
IDGSQNFNETWENY(ph)KY(ph)GFGR	ddPTM_K562_Methotrexat_30min_R1	1	IDGSQNFNETWENYKYGFGR	20	1	Q9Y5C1	Q9Y5C1	ANGPTL3	Angiopoietin-related protein 3	2	IDGSQNFNET(0.012)WENY(0.994)KY(0.994)GFGR	46.494	0.030182	0.0	1249.1	1132.0	1188.6	1246.4	1202.1	994.32	991.09	1448.7	1147.2	1385.6	True	False	1194.1910596301093	1319.0437592899377	939.1291031800658	1137.13004716084	1360.1972203235841	1186.4582676108432	1213.3671613460883	1397.748399869023	1093.8669223976326	1134.6544132614817	1.0524711715503698	1.1625070540187141	0.827678535599758	1.0021818395719646	1.1987766534250688	1.0456560638586467	1.0693715612125039	1.2318714698789182	0.9640529394790714	1.0	10.148037241039118														
IDIFPAKQENGDLS(ph)PFSGTSLR	ddPTM_K562_Methotrexat_30min_R1	1	IDIFPAKQENGDLSPFSGTSLR	22	1	P19174-2	P19174-2	PLCG1	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1	1	IDIFPAKQENGDLS(0.548)PFS(0.151)GT(0.151)S(0.151)LR	67.217	0.0059795000000000004	7394000.0	1200.3	861.55	1201.8	833.38	796.35	624.94	700.97	1206.4	973.67	1159.6	True	False	1147.5362491986393	1003.9064936539271	949.5586035687389	760.3188693059216	901.0839833663474	745.7008103635851	858.1803661511753	1163.9702282059707	928.4042942214987	949.5852032462569	1.2084605417983199	1.0572052831299046	0.9999719881086742	0.8006852536314715	0.9489237830222048	0.7852911016455695	0.903742353205795	1.2257670235665172	0.9776945671095664	1.0	9.891153644373789	-12.65149116754231	17.783050709686886	1.0000000128223598	0.9836709550577705	0.0	0.13974401007400458	6.121659848767941e-08	1.2097681544054691e-09	0.14437367966474016	0.035015738721718544	2.231047580918189e-13	12.65149116754231	-0.016329057764589372	
IDIIPNPQER	ddPTM_K562_Methotrexat_30min_R1	1	IDIIPNPQER	10	0	P08238;Q58FF7	P08238	HSP90AB1;HSP90AB3P	Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3	0		109.79	0.027620999999999996	18207000.0	1295.6	1181.8	1361.9	1389.8	979.85	1120.1	943.25	1165.7	1330.0	1496.4	False	True	1238.646975307637	1377.0723628346711	1076.0558014646908	1267.9583918037026	1108.7174497413396	1336.5434724745603	1154.7978235475064	1124.7016702749495	1268.1685902971167	1225.387459587529	1.0108206719567467	1.1237852583363306	0.8781351506787054	1.0347407931124928	0.9047892901683022	1.0907109110815014	0.9423940277112159	0.9178335076593073	1.0349123294635216	1.0	10.259022276863218	-6.74511090277239	24.991876193122387	0.9750362874195274	1.0673029298217642	0.22615645450737454	0.06796782738263268	335.36416034871	513290.0507848008	0.016123597983815133	0.04237923862074872	1.798411608575972e-07	6.74511090277239	0.09226664240223681	
IDIS(ph)PSTFR	ddPTM_K562_Methotrexat_30min_R1	5	IDISPSTFR	9	0	Q9Y2W1;A0A3B3ITZ9	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	1	IDIS(0.999)PS(0.001)TFR;IDIS(0.999)PS(0.001)TFR;IDIS(0.924)PS(0.076)TFR;IDIS(0.984)PS(0.016)TFR;IDIS(0.994)PS(0.006)TFR	158.08	4.377199999999999e-11	3162028000.0	9797.5	8403.900000000001	11728.9	10206.3	8554.9	8404.17	7676.09	9392.800000000001	9792.099999999999	10767.599999999999	True	False	9366.81363119526	9792.5016331243	9267.164174902127	9311.529525303013	9680.019299680756	10028.156910156707	9397.648582406335	9062.449900110285	9336.86740830706	8817.4832998227	1.0623001272237858	1.1105778485932836	1.0509987781988166	1.0560302989732056	1.0978211095534938	1.1373037599468265	1.0657971512795834	1.0277819182592056	1.0589038947762799	1.0	13.106151222874058	-9.098878208175478	4.634164537457037	1.033294728710501	1.0857333413921457	0.44591190879999365	0.02813238122545461	0.2376612605927622	8.367950950667606	0.014230366719664721	0.008066225343511198	7.963826535020879e-10	9.098878208175478	0.052438612681644736	
IDIS(ph)PSTLR	ddPTM_K562_Methotrexat_30min_R1	4	IDISPSTLR	9	0	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	IDIS(0.913)PS(0.087)T(0.001)LR;IDIS(0.923)PS(0.076)TLR;IDIS(0.682)PS(0.306)T(0.012)LR;IDIS(0.897)PS(0.089)T(0.014)LR	100.88	0.0079357	2143542000.0	21451.2	19570.8	23456.9	22095.9	20643.5	20367.2	19922.1	23048.2	23118.9	22250.3	True	False	20508.230932941628	22804.54205327873	18533.617247505023	20158.786753097873	23358.482087804598	24302.8731475617	24390.138055124058	22237.58174215589	22044.107385127816	18220.55506018471	1.1255546752116192	1.2515832793212145	1.0171818139615523	1.1063761058052812	1.2819852090481705	1.3338162897500296	1.338605655786032	1.220466756841515	1.2098482901488703	1.0	14.15327928876507	-7.7588066182873705	24.999442802398455	1.2523527712466218	1.1264894641077303	0.17965819537943628	0.10462374284004994	99.7642995958269	947305.9923266729	0.031063230349279727	0.038267716961828284	1.742582634110865e-08	7.7588066182873705	-0.1258633071388915	
IDISPS(ph)TFR	ddPTM_K562_Methotrexat_30min_R1	1	IDISPSTFR	9	0	Q9Y2W1;A0A3B3ITZ9	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	1	IDIS(0.126)PS(0.873)TFR	103.88	0.0068863	15274000.0	1601.9	1180.6	2034.6	1540.7	1481.7	1380.7	1248.2	1673.5	1643.1	1769.6	True	False	1531.482394060902	1375.6740832311839	1607.565264454115	1405.629223091066	1676.5695211325651	1647.5007342608926	1528.140623749798	1614.6420564511711	1566.7126396369854	1449.1082922254022	1.0568446832286063	0.9493245540114569	1.1093479162867599	0.9699959834833564	1.156966342769214	1.1369065673696603	1.0545385958719657	1.1142314657323213	1.0811563552858963	1.0	10.5009496965471	-6.773604872656001	24.999865619394836	1.0822167397409344	1.0030846032331728	0.19546117827280018	0.0601997685973104	288.94270888623214	593774.0032664045	0.015351115024177079	0.03233212710979748	1.6842056786857026e-07	6.773604872656001	-0.07913213650776152	
IDPQT(ph)GWPFFVDHNS(ph)RT(ph)TTWNDPR	ddPTM_K562_Methotrexat_30min_R1	1	IDPQTGWPFFVDHNSRTTTWNDPR	24	1	O95817	O95817	BAG3	BAG family molecular chaperone regulator 3	3	IDPQT(1)GWPFFVDHNS(0.505)RT(0.505)T(0.495)T(0.495)WNDPR	52.268	0.021277	21944000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
IDQDEET(ph)EAER	ddPTM_K562_Methotrexat_30min_R1	1	IDQDEETEAER	11	0	M0R0A8;Q86XR2-7	M0R0A8	FAM129C		1	IDQDEET(1)EAER	148.28	2.4122e-07	4813900.0	747.19	437.5	1162.6	876.87	730.73	597.32	783.25	817.58	833.63	853.18	True	False	714.3444222600444	509.7894387715085	918.5861478690433	799.9961685285024	826.8338031836399	712.7436362632844	958.9137506425492	788.825247991245	794.8747232551768	698.6608345167656	1.022448070606572	0.7296665471796605	1.314781225005107	1.145042242251673	1.1834552079272143	1.0201568501492706	1.3725025123324532	1.1290531957997079	1.1377118681698515	1.0	9.448448457807432	-6.761622559908657	24.999999999956117	1.1699399757040823	0.8760573073556321	0.4509881568242027	0.12637198396018645	3.6981719830000417	505050.73933071544	0.030689155729852095	0.07111654240873203	1.7313203751966474e-07	6.761622559908657	-0.2938826683484501	
IDS(ph)TEVIYQPR	ddPTM_K562_Methotrexat_30min_R1	3	IDSTEVIYQPR	11	0	K7EMR0;K7EQN8;K7EP59;Q15831-2;Q15831	K7EMR0	STK11	Serine/threonine-protein kinase STK11	1	IDS(0.986)T(0.014)EVIYQPR;IDS(0.5)T(0.5)EVIYQPR;IDS(0.5)T(0.5)EVIYQPR	166.45	6.1251e-05	58814000.0	3438.09	2963.91	4153.299999999999	3713.4	2789.0699999999997	2958.8900000000003	2532.19	3259.0	3151.3599999999997	3422.8999999999996	True	False	3286.9556802527277	3453.645749644029	3281.5790882027313	3387.851987425435	3155.8815916212443	3530.653615989869	3100.0980660575265	3144.379122781216	3004.853961442646	2802.979641420848	1.1726648426838195	1.232133726056374	1.1707466724728968	1.2086609325881907	1.1259024307509804	1.259607299252505	1.1060009213930884	1.1217987731039354	1.0720213293877034	1.0	11.452745550499548	-9.676629827209963	0.8228752219608256	1.001413497067505	1.194818783483308	0.7111026528056392	0.03984141814613588	0.29523096356428397	0.42112428754014664	0.03550850959484995	0.013800316922665598	2.1055723688902356e-10	9.676629827209963	0.1934052864158029	
IDTHPS(ph)PSHSSTVK	ddPTM_K562_Methotrexat_30min_R1	2	IDTHPSPSHSSTVK	14	0	H7C477;H0Y7U4;A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y594;B7ZBA0	H7C477	THOC2	THO complex subunit 2	1	IDT(0.129)HPS(0.844)PS(0.017)HS(0.001)S(0.004)T(0.006)VK;IDT(0.269)HPS(0.448)PS(0.049)HS(0.132)S(0.039)T(0.064)VK	171.11	9.156799999999999e-05	65398000.0	9292.4	6461.0	13156.3	9408.4	7749.5	6899.9	6273.4	8951.9	9408.5	11186.900000000001	True	False	8883.91722240559	7528.570431777636	10394.972421477283	8583.580179483344	8768.695082686649	8233.20802225446	7680.369643512245	8637.056603014778	8971.100888579256	9160.844006722631	0.9697706036568442	0.8218206124078566	1.1347177633249725	0.9369857376879613	0.957192926356108	0.898739026252665	0.8383910519463109	0.942823237321422	0.9792875942430487	1.0	13.161264807462418	-8.085252064863838	4.737510115482195	0.9224798853710033	0.9655816929414598	0.0315119259745148	0.08211048103430385	0.7758287314810373	30.25056817885337	0.027692780516391017	0.02809005541335959	8.217655581225725e-09	8.085252064863838	0.04310180757045645	
IEDFLERR	ddPTM_K562_Methotrexat_30min_R1	4	IEDFLERR	8	1	P46781;B5MCT8;C9JM19	P46781	RPS9	40S ribosomal protein S9	0	;;;	154.12	1.8543e-12	66116100.0	24790.6	20681.2	25824.7	25461.5	20879.600000000002	19158.7	20632.4	28218.7	28294.899999999998	32334.8	False	True	23700.834907426284	24098.416779705898	20404.44838540657	23229.329826528974	23625.633376148664	22860.84762619263	25259.74091127651	27226.23232648859	26979.476274885605	26478.654389381765	0.8950921205773426	0.9101073047492032	0.7705998985201068	0.8772851325800073	0.8922520392736727	0.8633689344636819	0.9539661849812862	1.0282332299109056	1.0189141743435677	1.0	14.692542187680518	-8.946372510426864	2.681699290757141	1.0174198851181744	0.8663289936994721	0.7687686943563969	0.03658456517932741	0.13445124690032229	1.9511503997894715	0.01926989336009511	0.011371910036598615	1.1314294780367386e-09	8.946372510426864	-0.15109089141870224	
IEDS(ph)EPHIPLIDDTDAEDDAPTKR	ddPTM_K562_Methotrexat_30min_R1	2	IEDSEPHIPLIDDTDAEDDAPTKR	24	1	H0YHH6;A0A0U1RQU3;E7ERY9;P20020-6;P20020;P20020-4;P20020-1	H0YHH6	ATP2B1	Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 1	1	IEDS(1)EPHIPLIDDTDAEDDAPTKR;IEDS(1)EPHIPLIDDTDAEDDAPTKR	107.58	4.2888999999999997e-07	27440000.0	5994.700000000001	4123.7	6574.5	7261.4	3999.8999999999996	3400.6000000000004	3879.2	5327.9	5824.3	9440.900000000001	True	False	5731.180165851104	4805.071334084734	5194.602295858437	6624.804336050802	4525.95695996365	4057.7178220667706	4749.209347580693	5140.51473711753	5553.5295642612755	7731.061525808545	0.7413186593741038	0.6215280163072044	0.6719132008608824	0.856907465286011	0.5854250344347515	0.5248590776985698	0.6143023609017265	0.6649170647467993	0.7183398483794197	1.0	12.916450803970722	-10.278914906441312	2.266852106384883	0.9999164998998941	0.6573027496242799	0.5851215006716329	0.08544774918991933	1.0460726779544696	7.378793703532424	0.08781139353215371	0.023981375020237644	5.261203417655406e-11	10.278914906441312	-0.34261375027561414	
IEDVGS(ph)DEEDDSGKDK	ddPTM_K562_Methotrexat_30min_R1	4	IEDVGSDEEDDSGKDK	16	1	P08238;Q58FF8	P08238	HSP90AB1;HSP90AB2P	Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2	1	IEDVGS(0.996)DEEDDS(0.004)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(0.999)DEEDDS(0.001)GKDK;IEDVGS(0.999)DEEDDS(0.001)GKDK	171.26	6.4693e-09	449312000.0	10858.869999999999	6393.26	23724.5	10860.2	8178.8099999999995	5904.42	4767.95	9867.4	10420.869999999999	16702.600000000002	True	False	10381.527076843808	7449.637548160763	18745.051664475417	9908.103127548258	9254.46687260189	7045.365601060843	5837.284158794943	9520.357949104442	9936.406028247751	13677.597288496841	0.7590168695473216	0.5446598105667338	1.3704930236716661	0.7244037763768049	0.6766149549076942	0.5151025763118606	0.42677701614334174	0.6960548514695101	0.7264730653098324	1.0	13.739527197169613	-7.510495156327088	24.901039277148925	0.643728163843905	0.8885054568186129	0.13670892760491393	0.23843603812323472	1001.476031790631	2013779.0177482716	0.06889880272468804	0.09648436881468973	3.0867740721875497e-08	7.510495156327088	0.24477729297470796	
IEDVGS(ph)DEEDDSGKDKK	ddPTM_K562_Methotrexat_30min_R1	1	IEDVGSDEEDDSGKDKK	17	2	P08238;Q58FF8	P08238	HSP90AB1;HSP90AB2P	Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2	1	IEDVGS(1)DEEDDSGKDKK	88.781	0.024549	510330000.0	3114.1	1566.4	8243.3	3298.4	1879.0	894.87	1088.6	2356.9	2236.7	4663.8	True	False	2977.207892718055	1825.2209757524377	6513.143981359782	3009.2343930963675	2126.121434978799	1067.7909626045082	1332.7462610271045	2274.0064910963624	2132.716305201173	3819.1406268539968	0.7795491665805768	0.47791405294650197	1.705395170725871	0.7879349537268057	0.5567015312369327	0.27958932831548994	0.3489649612941719	0.5954236078941055	0.5584283255256799	1.0	11.8990323279348	-7.652490110726798	4.283751695717326	0.5122250675667401	0.9791090152182907	0.23671677699386784	0.340041311617184	0.2924727539759949	9.521279860405066	0.10380399206166857	0.13511043867042974	2.225921730441599e-08	7.652490110726798	0.4668839476515506	
IEDVTPIPSDS(ph)TR	ddPTM_K562_Methotrexat_30min_R1	3	IEDVTPIPSDSTR	13	0	P62263;A0A2R8Y811	P62263	RPS14	40S ribosomal protein S14	1	IEDVTPIPSDS(0.986)T(0.014)R;IEDVTPIPSDS(0.774)T(0.226)R;IEDVTPIPSDS(0.927)T(0.072)R	241.76	1.1473999999999998e-58	171254400.0	6220.700000000001	6593.2	15118.4	5822.4	6826.199999999999	6538.4	5899.6	8169.200000000001	6190.7	6477.3	True	False	5947.2454764558615	7682.614234761849	11945.25444516027	5311.959231859171	7723.964949149694	7801.8532634833255	7222.7354781880385	7881.884605653363	5902.895708234853	5304.1982036797035	1.1212336432545176	1.4484025558155345	2.2520377230385997	1.0014631859296064	1.456198402199849	1.4708826789449372	1.3617016560914674	1.4859709805311254	1.112872385526584	1.0	12.372918970769296	-9.851106253912205	3.8335787532417878	1.0052598231121472	1.460379086290858	0.20647768251547327	0.3106283166204114	0.33948126855212246	8.79775994387164	0.29442020592132095	0.07879229175088252	1.408944045867797e-10	9.851106253912205	0.4551192631787109	
IEDVTPIPSDS(ph)TRR	ddPTM_K562_Methotrexat_30min_R1	3	IEDVTPIPSDSTRR	14	1	P62263;A0A2R8Y811	P62263	RPS14	40S ribosomal protein S14	1	IEDVTPIPSDS(0.82)T(0.18)RR;IEDVTPIPS(0.001)DS(0.836)T(0.163)RR;IEDVTPIPSDS(0.832)T(0.168)RR	165.24	1.7978e-09	171280000.0	13861.0	13205.599999999999	33452.7	15193.399999999998	17077.3	13944.1	13905.0	16743.8	12679.400000000001	15790.8	True	False	13251.687036692776	15387.600943179503	26431.43542819432	13861.418211275266	19323.264279703802	16638.599977263217	17023.550210896443	16154.911063523812	12089.937461513724	12930.933104019483	1.0248051652648014	1.1899838023596598	2.0440470316854635	1.0719580791092755	1.4943441532225785	1.286728486136181	1.316498204263759	1.249322916882323	0.9349624937550453	1.0	13.658538764208028	-9.625991828022649	2.8005213622472396	0.9604845277742103	1.3595113709230495	0.23352422165326114	0.2687726992124355	0.39797777827765374	5.854697087224515	0.22915189316696755	0.07142974823927237	2.365964216642443e-10	9.625991828022649	0.3990268431488392	
IEDVTPIPSDST(ph)RR	ddPTM_K562_Methotrexat_30min_R1	2	IEDVTPIPSDSTRR	14	1	P62263;A0A2R8Y811	P62263	RPS14	40S ribosomal protein S14	1	IEDVTPIPSDS(0.135)T(0.865)RR;IEDVTPIPS(0.001)DS(0.034)T(0.966)RR	258.6	2.5074e-89	131247000.0	5579.6	5283.1	10907.6	5141.4	5713.1	5247.700000000001	5177.1	5947.5	4657.799999999999	5489.0	True	False	5334.327464824397	6156.042477654306	8618.243821173557	4690.661444538461	6464.472788811808	6261.743755472507	6338.196461476597	5738.32305392491	4441.259894651057	4494.888910502508	1.1867540157356287	1.3695649881959127	1.917343007306954	1.0435544766364575	1.4381829935123156	1.3930808703284443	1.4100896791169006	1.276632897537704	0.9880688895945471	1.0	12.134069745174314	-9.648851209788058	2.8795527708372703	0.9818047609682031	1.4003607595884036	0.35833590001303117	0.21075281467618992	0.2909450871213894	4.502729508517686	0.18049789247039755	0.055450929116599885	2.244650814200088e-10	9.648851209788058	0.41855599862020043	
IEDVTPIPSDSTRR	ddPTM_K562_Methotrexat_30min_R1	3	IEDVTPIPSDSTRR	14	1	P62263;A0A2R8Y811	P62263	RPS14	40S ribosomal protein S14	0	;;	115.34	0.0018245000000000002	56634200.0	8454.8	7333.8	10478.5	8414.7	7770.500000000001	7617.1	7219.7	7475.3	8774.5	9863.2	False	True	8083.137115491674	8545.58579671426	8279.206047175092	7676.996315664572	8792.456950773161	9088.99677188285	8838.901507199507	7212.389461959625	8366.575410197023	8076.878903637878	1.0007748304671225	1.058030694612157	1.025050164296271	0.9504904564319769	1.08859586180164	1.1253105166389343	1.0943461716651972	0.8929673885182454	1.0358673826877192	1.0	12.97958219396046	-9.244034434216418	24.99321997117598	0.9733130218410362	1.0490489895292598	0.24984343062431102	0.057630785415419	1143.7983177206263	1642479.821840301	0.028550441028367388	0.01643020951908242	5.701190670514612e-10	9.244034434216418	0.07573596768822366	
IEEAMDGSET(ph)PQLFTVLPEKR	ddPTM_K562_Methotrexat_30min_R1	4	IEEAMDGSETPQLFTVLPEKR	21	1	E9PPJ0;Q13435	E9PPJ0	SF3B2	Splicing factor 3B subunit 2	1	IEEAMDGS(0.14)ET(0.86)PQLFTVLPEKR;IEEAMDGS(0.374)ET(0.626)PQLFTVLPEKR;IEEAMDGS(0.056)ET(0.944)PQLFTVLPEKR;IEEAMDGS(0.287)ET(0.713)PQLFTVLPEKR	93.38799999999999	0.00019771	87722000.0	15412.8	10206.4	12631.6	16441.5	9447.6	9201.0	10110.5	14094.5	17069.7	22680.800000000003	True	False	14735.271766765622	11892.83412086292	9980.399781027521	15000.099222075525	10690.124996863076	10978.963030299466	12378.036994409831	13598.788446161343	16276.133372777951	18573.08733855442	0.7933668483956259	0.6403261829375839	0.5373581461769144	0.8076255147380906	0.5755707062590656	0.5911221344180672	0.6664501581659626	0.7321770580345403	0.8763289094641579	1.0	14.180926028845823	-9.830660626354929	1.7457002783465267	0.9981149490479624	0.6530144619879215	0.6569195816695585	0.08201264706950893	0.19786713223519187	1.2483820600329631	0.0767128031781142	0.022476800869825356	1.4768601551962118e-10	9.830660626354929	-0.34510048706004093	
IEIESFYEGEDFSETLTR	ddPTM_K562_Methotrexat_30min_R1	1	IEIESFYEGEDFSETLTR	18	0	P11021	P11021	HSPA5	78 kDa glucose-regulated protein	0		105.0	0.0047655	0.0	182.72	66.76899999999999	310.17	169.35	317.78	56.903999999999996	136.27	201.91	254.1	251.18	False	True	174.68784758275044	77.80144237105108	245.06955572384413	154.5033484328371	359.5736400253128	67.89989265038157	166.83201634224088	194.8087108563225	242.28694646202803	205.68886801603563	0.8492819726594619	0.37824819165704987	1.1914575547410682	0.7511507546475092	1.7481434143401489	0.33010971038592163	0.8110891850950075	0.9471038113795011	1.1779293104143058	1.0	7.684319906376308	-6.763784492036905	24.994131678944267	0.9806624239090493	0.6137651037232749	0.15166235937925387	0.3590908375823871	108.14186492679126	1152628.379635255	0.09132362065776024	0.20579374271740453	1.7227232219796467e-07	6.763784492036905	-0.3668973201857745	
IERS(ph)PLLDQVQTFLPQMAR	ddPTM_K562_Methotrexat_30min_R1	2	IERSPLLDQVQTFLPQMAR	19	1	Q8N5I9;A0A087WT30	Q8N5I9	C12orf45	Uncharacterized protein C12orf45	1	IERS(1)PLLDQVQTFLPQMAR;IERS(0.999)PLLDQVQT(0.001)FLPQMAR	88.76799999999999	0.0032630000000000003	16839200.0	1571.45	935.54	1642.2	1279.53	1021.8299999999999	1037.56	1049.6599999999999	1589.8600000000001	1565.1399999999999	1804.28	True	False	1502.3709396011009	1090.1220835389652	1297.524661990832	1167.3555914984831	1156.2185555638032	1238.0537856447681	1285.0729747838593	1533.9437226587731	1492.3769830207739	1477.5074081693317	1.0168280248845423	0.7378115855876848	0.878184877325588	0.7900844253260737	0.782546706142331	0.8379340630032762	0.869757381708222	1.0381969756479037	1.010063959591151	1.0	10.528949648704396	-9.169080911780668	3.8996707264807524	1.0186392497925145	0.8340179614421698	0.5508235060056682	0.07097127843584194	0.1627838894175222	4.50673531843935	0.03468326458919021	0.018744339517843957	6.775152705155078e-10	9.169080911780668	-0.18462128835034475	
IES(ph)DEEEDFENVGK	ddPTM_K562_Methotrexat_30min_R1	3	IESDEEEDFENVGK	14	0	Q96T23-3;Q96T23-2;Q96T23	Q96T23-3	RSF1	Remodeling and spacing factor 1	1	IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK	222.75	1.8084e-27	42183100.0	8566.6	5886.780000000001	12759.0	7501.799999999999	6843.3	5584.9	4504.53	7829.3	7796.599999999999	9943.6	True	False	8190.0225213572085	6859.470336848782	10081.060262051542	6844.128841295882	7743.3138988772835	6664.102883156126	5514.785518266048	7553.939081310513	7434.137767752252	8142.717684545947	1.005809465419763	0.8424055214228243	1.2380461478093945	0.8405214458417667	0.9509495722261511	0.8184126161961771	0.6772659610602185	0.9276926173735734	0.9129799233812923	1.0	12.991294668299783														
IES(ph)SSNTMHLAFR	ddPTM_K562_Methotrexat_30min_R1	1	IESSSNTMHLAFR	13	0	H7BXX0;Q7Z407-5;Q7Z407-3;Q7Z407-4;Q7Z407-2;Q7Z407	H7BXX0	CSMD3	CUB and sushi domain-containing protein 3	1	IES(0.993)S(0.007)SNTMHLAFR	82.774	0.025810000000000003	137660000.0	3529.2	3542.6	3563.1	3864.8	3300.3	3929.9	3529.7	3306.8	3366.7	3595.3	True	False	3374.0605937447594	4127.954436095875	2815.2540026425127	3525.9789844890993	3734.3472974244446	4689.297556001942	4321.325075828924	3190.4979696879177	3210.1828518445864	2944.1563308306895	1.1460195093623895	1.40208398340423	0.9562175666970079	1.1976194835734995	1.268393005601983	1.592747472984515	1.4677634575911491	1.083671385339692	1.0903574712484232	1.0	11.523638563300963	-9.414238447973396	8.45515933498655	1.0589977903243186	1.2887003300360331	0.2877364655796325	0.1677691012622423	0.4518892632836346	31.559161860237808	0.10082063714545336	0.048136998671859096	3.8526677011772976e-10	9.414238447973396	0.2297025397117145	
IET(ph)DEEESCDNAHGDANQPAR	ddPTM_K562_Methotrexat_30min_R1	2	IETDEEESCDNAHGDANQPAR	21	0	Q96T23-3;Q96T23-2;Q96T23	Q96T23-3	RSF1	Remodeling and spacing factor 1	1	IET(0.986)DEEES(0.014)CDNAHGDANQPAR;IET(0.978)DEEES(0.022)CDNAHGDANQPAR	201.95	2.3895e-26	48239000.0	2103.95	1684.3600000000001	2545.4	2071.26	1874.1100000000001	1814.51	1645.31	2107.61	2390.3	2346.5	True	False	2011.4628771985965	1962.6718607752643	2011.1553249491317	1889.675851638607	2120.5883142672265	2165.138377144732	2014.3126499453476	2033.4841616952808	2279.175474727215	1921.5261119501058	1.0468048623899346	1.021413057345029	1.0466448061473719	0.983424497791927	1.1035958871852631	1.1267806165524292	1.048287940204505	1.058265172171692	1.186127766129673	1.0	10.908036866228018	-7.778402850955309	24.95489646252302	1.0901253038739163	1.025922816811009	0.2776159525611138	0.049316790070484465	302.47837957806877	444972.6141896638	0.01478417091922858	0.016807411630037482	1.6657013934241963e-08	7.778402850955309	-0.06420248706290721	
IETIEVMEDR	ddPTM_K562_Methotrexat_30min_R1	1	IETIEVMEDR	10	0	P51991;P51991-2	P51991	HNRNPA3	Heterogeneous nuclear ribonucleoprotein A3	0		147.4	2.1579e-06	6503700.0	1058.8	861.74	1461.3	1185.2	1008.4	842.07	1047.3	1489.8	1465.3	1311.8	False	True	1012.2564197713227	1004.1278879244803	1154.5930998460622	1081.29535614171	1141.0222751637161	1004.7881098711304	1282.1836847085117	1437.4028895733215	1397.1785228288445	1074.220308398103	0.942317336451047	0.9347504232366024	1.0748196536777568	1.0065862167083375	1.0621864679371305	0.9353650289571315	1.1935947167304326	1.3380894760003217	1.3006443016445506	1.0	10.069074186029184	-8.865354384663187	5.3324072993253315	1.2437137178634219	0.9980833973925298	0.5366817736676193	0.09657220422485847	0.1446782826100011	6.2890655076053665	0.0398177489463588	0.02665057217712298	1.3634700897849426e-09	8.865354384663187	-0.24563032047089206	
IFDFDDDGTLNREDLSR	ddPTM_K562_Methotrexat_30min_R1	1	IFDFDDDGTLNREDLSR	17	1	Q99828;Q99828-2	Q99828	CIB1	Calcium and integrin-binding protein 1	0		82.925	0.009071899999999999	0.0	603.71	990.26	957.1	846.6	783.37	514.16	527.47	769.26	700.53	977.74	False	True	577.1716312619434	1153.8836334579987	756.2177895453821	772.3798924312961	886.3968858538279	613.5141432082135	645.7685745948619	742.2046897792814	667.9625132036379	800.6618115056876	0.7208681904992335	1.4411623195666825	0.9444908932565096	0.9646768227634013	1.1070802592506703	0.7662587804137518	0.8065434935387505	0.9269889972440742	0.834262985451371	1.0	9.645049186602416	-8.25508459983264	24.86523609106954	0.8584809533520041	1.0491758626774916	0.17978535380299066	0.17871799265312877	746.9332650453681	2922633.9007367273	0.05711749123955382	0.055787517674098626	5.557959786052085e-09	8.25508459983264	0.1906949093254875	
IFETLGTPTEEQWPDMCS(ph)LPDY(ph)VT(ph)FK	ddPTM_K562_Methotrexat_30min_R1	1	IFETLGTPTEEQWPDMCSLPDYVTFK	26	0	D6R9G1;D6RAD4;P50613	D6R9G1	CDK7	Cyclin-dependent kinase 7	3	IFET(0.006)LGT(0.02)PT(0.064)EEQWPDMCS(0.967)LPDY(0.971)VT(0.972)FK	42.611999999999995	0.03123	0.0	363.97	456.82	518.36	430.25	506.45	440.7	309.64	391.61	351.22	398.56	True	False	347.9703146053724	532.3017403876582	409.5633198085299	392.5306505062191	573.0570520196986	525.8590378712067	379.0846520893187	377.83685433333886	334.8918588602654	326.3769218746362	1.066160905638513	1.6309417263029378	1.2548783089689357	1.2026911959694044	1.755813642484851	1.6112016586552438	1.1614934349890338	1.1576702548793227	1.0260892741334813	1.0	8.350395237665866	-8.916003066988306	6.338367104301908	1.086155530828044	1.427057268000529	0.39922942600774247	0.20256795705998673	0.22981195699559948	13.908438219331451	0.0881271244937092	0.059014444581833525	1.2133802815412859e-09	8.916003066988306	0.34090173717248495	
IFLGADAEEEIGT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	IFLGADAEEEIGTPR	15	0	P28749;P28749-2;H0YE05	P28749	RBL1	Retinoblastoma-like protein 1	1	IFLGADAEEEIGT(1)PR	108.71	0.0038695	0.0	487.47	383.0	425.57	517.68	429.28	468.3	508.16	494.78	543.37	529.42	True	False	466.04140248009696	446.284240113115	336.2486727581529	472.295798150051	485.73784438940885	558.7923472545638	622.1278155461449	477.3783069560263	518.1088473005591	433.5369078153102	1.0749751499326416	1.0294031074817631	0.7755941113585587	1.089401593350046	1.1204071340480581	1.2889152853685373	1.4350054270608392	1.101124952340604	1.1950743707414113	1.0	8.760011007802127	-7.740342823869363	2.4946452048587378	1.2205568887091123	0.9662847275482965	0.36685917618346253	0.13246178778191825	0.282782513004797	3.6044402290722473	0.04402098056736954	0.0565182276690491	1.8182649878871058e-08	7.740342823869363	-0.25427216116081575	
IFPDRLSGEMPPAS(ph)PSFPR	ddPTM_K562_Methotrexat_30min_R1	1	IFPDRLSGEMPPASPSFPR	19	1	Q96JM7-2;Q96JM7	Q96JM7-2	L3MBTL3	Lethal(3)malignant brain tumor-like protein 3	1	IFPDRLS(0.017)GEMPPAS(0.865)PS(0.118)FPR	50.722	0.033366	0.0	1021.7	940.36	1391.5	1473.2	760.95	1127.5	873.91	953.88	1213.2	1257.7	True	False	976.7872913490368	1095.7385066129727	1099.443165972624	1344.0468432905568	861.0282628776578	1345.373417744012	1069.9065634523213	920.3314997356692	1156.798596803355	1029.918342637821	0.9484123652437286	1.063908138393354	1.0675051802230615	1.305003307202192	0.8360160482940784	1.3062913456791623	1.038826593487094	0.8935965713345015	1.1231944795162778	1.0	10.008314242127366	-8.995414345641798	24.999655112606177	0.9982796021144558	1.0916233083899847	0.06256878881439998	0.14330836466522728	335.94337354025566	1831456.806912894	0.05760329917800672	0.038677504936368255	1.0106148008417365e-09	8.995414345641798	0.0933437062755289	
IFQGSFGGPTLYENPHYQS(ph)PNMHR	ddPTM_K562_Methotrexat_30min_R1	1	IFQGSFGGPTLYENPHYQSPNMHR	24	0	Q8TDN6	Q8TDN6	BRIX1	Ribosome biogenesis protein BRX1 homolog	1	IFQGSFGGPTLY(0.037)ENPHY(0.44)QS(0.523)PNMHR	86.557	0.0032024	9842000.0	430.65	412.13	541.63	450.81	600.3	339.26	513.06	1248.7	958.49	1058.4	True	False	411.71914164575014	480.2274774877759	427.9492648118957	411.2881872276783	679.2499720158456	404.81719352889866	628.1267652788591	1204.7825132301027	913.9300091081822	866.713503894307	0.4750348757643887	0.5540786838211513	0.49376092894484636	0.47453764753829614	0.7837076138353073	0.4670715198389996	0.7247224861001557	1.3900585462402375	1.0544776388065058	1.0	9.75941137259107	-9.085082439878649	4.843553149472971	1.1615241151389892	0.5503510974920015	0.8135132118731927	0.1296640573307765	0.08575174451546294	3.452432937272798	0.06035036415155629	0.03443911468349688	8.220865826843742e-10	9.085082439878649	-0.6111730176469877	
IFRDGEEAGAYDGPR	ddPTM_K562_Methotrexat_30min_R1	3	IFRDGEEAGAYDGPR	15	1	P30101;H7BZJ3	P30101;H7BZJ3	PDIA3	Protein disulfide-isomerase A3	0	;;	138.28	3.1453e-05	131558000.0	5119.2	4567.77	5380.6	5383.6	4150.55	4238.08	4504.19	5192.400000000001	4737.59	5999.8	False	True	4894.166097557003	5322.516353685333	4251.285590249588	4911.628146578223	4696.420075546175	5057.028979399149	5514.369264611122	5009.780348919665	4517.340474966705	4913.178080749306	0.9961304103210109	1.0833143570634833	0.86528221049159	0.9996845353159178	0.9558823226757388	1.0292785843064545	1.1223629947828246	1.0196618698900541	0.9194334910567231	1.0	12.262440815946787	-8.280591505295652	23.014478660292692	1.025889742678088	0.9805090342314956	0.06685530958186003	0.06813584252505417	801.5015236786686	963132.4808435556	0.0247131535592951	0.021843953185442286	5.240931636105456e-09	8.280591505295652	-0.045380708446592366	
IFSLS(ph)GTLETVR	ddPTM_K562_Methotrexat_30min_R1	1	IFSLSGTLETVR	12	0	B4DEM9;Q9Y2S7	B4DEM9	POLDIP2	Polymerase delta-interacting protein 2	1	IFS(0.011)LS(0.776)GT(0.213)LETVR	109.6	0.0023171	2380300.0	726.14	434.09	852.8	954.91	463.7	667.49	563.83	758.11	762.75	826.26	True	False	694.2197550554861	505.8159942315984	673.8089342015478	871.1945228934188	524.6846777007289	796.4729956629272	690.2832301625132	731.4468415991613	727.2899189843047	676.6163073768995	1.0260168835522625	0.74756695739797	0.9958508638577818	1.287575415187462	0.77545378670346	1.1771412940824426	1.0201989260923927	1.0810363770788032	1.0748926844578373	1.0	9.402194138246072	-6.990320196552126	24.63586450590503	1.0610058518616488	0.8830210815559618	0.1970697778833237	0.13825259282709124	244.64823819707414	622636.5871230692	0.033795546905733116	0.07020450228525728	1.0225388170733683e-07	6.990320196552126	-0.17798477030568693	
IFTSIGEDYDER	ddPTM_K562_Methotrexat_30min_R1	2	IFTSIGEDYDER	12	0	D6RBK0;C9JZ20;E7ESE2;E9PCW0;C9JW96;P35232-2;P35232	D6RBK0	PHB	Prohibitin	0	;	294.93	5.1978999999999986e-163	83498000.0	3260.8	2742.1000000000004	3134.7	3102.7	2570.2	2679.8	3018.8	3033.1000000000004	3346.7	3166.5	False	True	3117.459136371677	3195.1854172693807	2476.7693082101227	2830.691108252518	2908.226350283402	3197.633423388384	3695.8427455342826	2926.4241538225556	3191.112647479216	2593.016165987646	1.2022521021130144	1.2322273417267247	0.9551692506578544	1.091659645389964	1.1215612106204114	1.2331714184166866	1.4253064805427405	1.1285792168240951	1.2306566728494586	1.0	11.340415485268068	-8.250957905037836	10.298632055462697	1.2254537163677361	1.1159446147317784	0.09054057054526721	0.12152451470097342	0.6450092403096772	607.4233356933468	0.04118170366829664	0.03980908674203313	5.611023594955898e-09	8.250957905037836	-0.10950910163595773	
IFVGGLS(ph)PDTPEEK	ddPTM_K562_Methotrexat_30min_R1	2	IFVGGLSPDTPEEK	14	0	D6RAF8;Q14103-3;Q14103;D6RF44;H0YA96;H0Y8G5;Q14103-4;Q14103-2	D6RAF8	HNRNPD	Heterogeneous nuclear ribonucleoprotein D0	1	IFVGGLS(0.862)PDT(0.138)PEEK;IFVGGLS(0.97)PDT(0.03)PEEK	211.82	5.468e-19	12258300.0	3852.0	2972.5	5364.4	3994.1	2867.6	2931.6000000000004	2399.0	4137.8	3673.9	5346.5	True	False	3682.670692254566	3463.6551011389934	4238.485748863488	3643.943454240299	3244.739663089519	3498.0902097191542	2937.036818118705	3992.2712286726314	3503.1011908966752	4378.197041355741	0.8411386370847759	0.7911144858081689	0.9680893090985713	0.832293160819442	0.7411132099446949	0.798979620304148	0.6708324888934715	0.911852799442849	0.8001241510619436	1.0	12.096121169329384	-10.915373011898414	1.2422505614369292	1.000413616603684	0.8155788220381375	0.3280150882108708	0.07823816728592915	12.833576766616552	16.021477669920625	0.09458666403582895	0.023246539000212653	1.215141877120293e-11	10.915373011898414	-0.18483479456554663	
IFYPEIEEVQALDDT(ph)ERGSGGFGSTGKN	ddPTM_K562_Methotrexat_30min_R1	2	IFYPEIEEVQALDDTERGSGGFGSTGKN	28	2	P33316-2;A0A0C4DGL3;H0YNW5;P33316	P33316-2	DUT	Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial	1	IFYPEIEEVQALDDT(0.748)ERGS(0.239)GGFGS(0.008)T(0.005)GKN;IFYPEIEEVQALDDT(0.781)ERGS(0.218)GGFGS(0.001)T(0.001)GKN	64.545	0.00059471	36357000.0	2034.03	1487.48	2401.8	2041.13	1353.9099999999999	1273.15	1616.59	1921.7	1874.4	2870.3	True	False	1944.616476678753	1733.260787163071	1897.6950025390213	1862.1873019587656	1531.9728962385036	1519.1682188920513	1979.1514588589077	1854.1127217700714	1787.2595531224931	2350.4608562243284	0.8273341253606303	0.7374131683891563	0.807371455480178	0.7922647582185637	0.6517755410312998	0.6463278105096262	0.842026981056866	0.788829440345768	0.7603868613210876	1.0	11.198727939241268	-11.191886430793476	0.7527845251154743	1.0105181960043015	0.7545159631746337	0.5589143767152076	0.06359312966296157	6.573190488890858	3.357685446187858	0.2797254594950018	0.02382058830170773	6.428558039067754e-12	11.191886430793476	-0.25600223282966783	
IGAEVYHNLK	ddPTM_K562_Methotrexat_30min_R1	3	IGAEVYHNLK	10	0	P06733;A0A2R8Y6G6;K7EM90;P06733-2	P06733	ENO1	Alpha-enolase;Enolase	0	;;	122.33	0.004142100000000001	40718200.0	17377.2	12383.2	20071.1	19997.3	13166.2	12345.900000000001	12281.0	18992.6	19816.4	25560.2	False	True	16613.319094871775	14429.313321589358	15858.450397810382	18244.167756811174	14897.78607622027	14731.570446231299	15035.326870911143	18324.619492891838	18895.139889296064	20931.00009659795	0.7937183611963217	0.6893752450908759	0.7576537348728004	0.871633828895568	0.71175701148851	0.7038158892668352	0.7183281640400418	0.8754774931117724	0.9027346902725023	1.0	14.353353625683537	-9.654237186348956	1.7631318580658255	0.9828060014428949	0.7492937831900843	0.7024231736297553	0.054305029070931946	0.20066497346059234	1.1505943152586247	0.05204619932162517	0.015949007036012274	2.2169853008740408e-10	9.654237186348956	-0.23351221825281054	
IGAVLFT(ph)VVT(ph)PMMNPFIYS(ph)LR	ddPTM_K562_Methotrexat_30min_R1	1	IGAVLFTVVTPMMNPFIYSLR	21	0	A0A286YFI5;Q8NGQ3	A0A286YFI5	OR1S2	Olfactory receptor 1S2	3	IGAVLFT(1)VVT(1)PMMNPFIY(0.245)S(0.755)LR	51.971000000000004	0.015163999999999999	6991500.0	243.77	237.02	259.76	188.29	144.38	251.72	188.62	227.05	256.93	279.01	True	False	233.05416268195637	276.1835263488527	205.239925830434	171.7829080390841	163.36850068240503	300.3613274629914	230.92283644583162	219.064522806835	244.98538037972776	228.4785853378218	1.0200262853403492	1.2087939267502719	0.8982895509746447	0.7518556182632647	0.7150276269474144	1.3146147899107739	1.0106979439862858	0.9587967401099431	1.072246574082641	1.0	7.835915141601944	-8.251191619790193	24.987008645896434	1.0649101852771437	0.9244954733700952	0.19067793844957026	0.15656896642131723	1498.1504139480455	3652928.802112976	0.05725062882616591	0.0566331801174289	5.6080048455823265e-09	8.251191619790193	-0.14041471190704846	
IGDEYAEDS(ph)S(ph)DEEDIR	ddPTM_K562_Methotrexat_30min_R1	2	IGDEYAEDSSDEEDIR	16	0	Q14137;A0A075B729;Q14137-2	Q14137	BOP1	Ribosome biogenesis protein BOP1	2	IGDEY(0.006)AEDS(1)S(0.995)DEEDIR;IGDEY(0.002)AEDS(0.998)S(0.999)DEEDIR	102.63	0.0028991999999999998	39986000.0	9521.2	6722.4	11066.6	8349.9	7954.0	7384.700000000001	7198.0	9638.0	9448.9	10651.8	True	False	9102.659448362983	7833.1623387373465	8743.87189403712	7617.877231056074	9000.090417148147	8811.688760988207	8812.33472981177	9299.026077129594	9009.622701397306	8722.655801947642	1.0435651314282621	0.8980249268793016	1.0024322972923845	0.8733437847398626	1.0318062091981846	1.0102070930072335	1.0102811494458035	1.066077383800156	1.0328990282278006	1.0	13.090551746378358	-7.867614721565769	20.78607278473323	1.0270301495053558	0.9535521172661601	0.34455683685919625	0.047838930725778314	3.3573924893902785	643.123471530826	0.013912463196625903	0.01577529706259002	1.3563921836117809e-08	7.867614721565769	-0.07347803223919569	
IGEGTY(ph)GVVYK	ddPTM_K562_Methotrexat_30min_R1	5	IGEGTYGVVYK	11	0	A0A087WZZ9;A0A024QZP7;P06493-2;P06493;G3V317;K7ELV5;E5RIU6;E7ESI2;P24941-2;G3V5T9;P24941;Q00526	A0A087WZZ9;G3V5T9	CDK1;CDC2;CDK2;CDK3	Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3	1	IGEGT(0.013)Y(0.987)GVVYK;IGEGT(0.154)Y(0.846)GVVYK;IGEGT(0.139)Y(0.861)GVVYK;IGEGT(0.174)Y(0.826)GVVYK;IGEGT(0.182)Y(0.817)GVVYK	183.43	1.5098e-07	2959727000.0	8303.550000000001	5477.889999999999	10954.630000000001	9378.23	5500.849999999999	4803.28	4750.23	5994.129999999999	6870.040000000001	9114.92	True	False	7938.535884390037	6383.0182142904205	8655.40286687653	8556.055136541398	6224.308193508855	5731.445880249625	5815.589997720724	5783.313050394774	6550.653339913381	7464.119662619335	1.0635595680689045	0.8551602202007663	1.159601300368106	1.1462912604939237	0.8338971606632307	0.7678662909107657	0.7791394378154833	0.7748151572861137	0.8776190141644384	1.0	12.865756399909055	-7.802284532359386	11.360873590844824	0.8209449720476106	1.0491337399903644	0.5224498471170411	0.10080075202570313	0.5155166943569327	141.68349994922633	0.031710602365162134	0.036037580696776365	1.5765780204572174e-08	7.802284532359386	0.22818876794275378	
IGEGTYGVVYK	ddPTM_K562_Methotrexat_30min_R1	1	IGEGTYGVVYK	11	0	A0A087WZZ9;A0A024QZP7;P06493-2;P06493;G3V317;K7ELV5;E5RIU6;E7ESI2;P24941-2;G3V5T9;P24941;Q00526	A0A087WZZ9;G3V5T9	CDK1;CDC2;CDK2;CDK3	Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3	0		156.83	1.0616e-06	13857000.0	2138.6	1513.6	2772.6	2370.8	1330.7	1177.3	1500.8	1710.1	1862.7	2430.7	False	True	2044.5897046873351	1763.6966731989837	2190.6691498208384	2162.9556449044585	1505.7103744152687	1404.7965629357207	1837.3926038485001	1649.9548137060933	1776.1034835687506	1990.4766760354232	1.0271859647005224	0.8860674904826649	1.1005751417214056	1.0866520924086256	0.7564571806057538	0.7057588666317638	0.923091752829864	0.8289244649640547	0.8923005755115627	1.0	10.958898251009623	-7.758307243854614	24.999999440621025	0.8388686775099853	1.0205774864910526	0.44503691631849784	0.09456358124311881	76.38156962267821	609655.0844164542	0.029022537050513227	0.03588336280223086	1.7445874988832535e-08	7.758307243854614	0.18170880898106734	
IGELGAPEVWGLS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	IGELGAPEVWGLSPK	15	0	Q8N5F7;A0A494C050	Q8N5F7	NKAP	NF-kappa-B-activating protein	1	IGELGAPEVWGLS(1)PK;IGELGAPEVWGLS(1)PK	155.03	1.1351e-08	51985000.0	10808.8	7147.3	16979.6	10750.2	8340.0	6931.9	6130.4	11625.2	10362.1	14576.2	True	False	10333.658094091683	8328.269841672238	13415.81399996319	9807.74665676224	9436.85618292879	8271.391569365602	7505.298253353438	11216.335126773918	9880.368232720113	11936.308933734124	0.8657331300203644	0.6977257281046967	1.1239499643015876	0.8216733255825684	0.7906008662576219	0.6929605806355417	0.6287788205734299	0.9396820398200794	0.8277574154265094	1.0	13.543069160352289	-5.166236791931999	14.690225213790555	0.829498803816203	53.68671882949817	0.0	0.14390902589312818	0.0	0.0	0.03322600222702977	0.0	6.819667615819026e-06	5.166236791931999	52.85722002568197	
IGFPWSEIR	ddPTM_K562_Methotrexat_30min_R1	1	IGFPWSEIR	9	0	P26038;A0A2R8Y7M3;A0A2R8Y5S7;P35241-4;P35241;P35241-5;E7EQR4;P15311	P26038;E7EQR4	MSN;RDX;EZR	Moesin;Radixin;Ezrin	0		130.04	0.012263	5289200.0	2755.0	2053.9	2038.1	2544.6	2040.7	2090.2	1985.6	2804.7	3165.8	3185.7	False	True	2633.8934987438556	2393.2720646692605	1610.3306622844448	2321.5188687463683	2309.0878192449372	2494.1015678656618	2430.921344750522	2706.057111280907	3018.6226489944443	2608.738859935841	1.0096424518353797	0.9174057631541244	0.6172831964959685	0.8899008269472642	0.8851356702302225	0.9560564325426584	0.9318377481486622	1.0373047118052512	1.1571195167724393	1.0	11.349136819338186	-8.89881631920184	1.1428849449531917	1.0794469230528156	0.8535002899624726	0.40483693787072894	0.1022187884167055	0.5123087967599737	1.290541961963085	0.07920805244168935	0.03990681400606764	1.2623613256437032e-09	8.89881631920184	-0.22594663309034302	
IGGIGTVPVGR	ddPTM_K562_Methotrexat_30min_R1	2	IGGIGTVPVGR	11	0	A0A087WVQ9;Q5VTE0;P68104;A0A2U3TZH3;Q05639	A0A087WVQ9	EEF1A1;EEF1A1P5;EEF1A2	Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2	0	;	117.53	0.019261	30220000.0	1236.99	1038.97	1460.83	1275.3600000000001	1006.43	1097.0	910.8499999999999	1387.42	1176.15	1343.06	False	True	1182.6134007300045	1210.6421330295643	1154.221746423132	1163.5511689241396	1138.7931856336952	1308.9797244037084	1115.131298784252	1338.6236522028582	1121.4710432165068	1099.8188194825098	1.0752802005028896	1.100765063830422	1.049465353726371	1.057948044089314	1.035437078781325	1.1901776012703744	1.0139227289354324	1.2171310660356873	1.019687082408887	1.0	10.10305016317291														
IGITNHDEYSLVR	ddPTM_K562_Methotrexat_30min_R1	2	IGITNHDEYSLVR	13	0	Q9Y490	Q9Y490	TLN1	Talin-1	0	;	90.861	0.017708	6848300.0	2832.7	2363.88	3129.4	3233.3	2280.27	2876.0	2504.82	3748.0	3102.0	3943.5	False	True	2708.177899779209	2754.470990910158	2472.5817057813365	2949.8416090220985	2580.165473410914	3431.746296613548	3066.5896468362207	3616.180715613376	2957.788697068912	3229.2939367037047	0.8386284905806921	0.8529638505814614	0.7656725446012571	0.9134633349707222	0.7989874950945508	1.0626924534830349	0.9496161411576042	1.11980537742705	0.9159242716963909	1.0	11.657003048538957	-8.25894897006313	24.983923782657154	1.0133460179850855	0.8356248226261205	0.6577169202863353	0.06332724352510258	126.57880426399745	1269849.772220456	0.019830537721215912	0.01893940297618147	5.508724205374105e-09	8.25894897006313	-0.17772119535896502	
IGMARMFY(ph)HRPK	ddPTM_K562_Methotrexat_30min_R1	2	IGMARMFYHRPK	12	2	P33897	P33897	ABCD1	ATP-binding cassette sub-family D member 1	1	IGMARMFY(1)HRPK;IGMARMFY(1)HRPK	56.358999999999995	0.026807	28924000.0	4507.7	5116.8	4634.2	4024.2	5386.700000000001	4749.8	4852.0	5614.1	5232.0	4630.2	True	False	4309.546905367579	5962.264229270981	3661.5447500900714	3671.404633973566	6095.145467695743	5667.631627140142	5940.18451084283	5416.648920897829	4988.765461980837	3791.625912444652	1.136596015768074	1.5724821928508261	0.9656925115086813	0.9682929483954357	1.6075281708806277	1.4947760559759269	1.5666589078174364	1.4285821032923165	1.3157325055741929	1.0	11.888600917441611	-7.766400445286164	24.99993852057228	1.4364924961120102	1.1762404119784755	0.20843747525187173	0.22381169072479476	185.97925203223042	937190.8557595887	0.06904328008388597	0.08074721723180525	1.7123776655273095e-08	7.766400445286164	-0.26025208413353473	
IGPLGLS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	IGPLGLSPK	9	0	P30050	P30050	RPL12	60S ribosomal protein L12	1	IGPLGLS(1)PK	94.363	0.010865999999999999	37275000.0	4613.0	3531.1	7724.6	5174.0	3231.7	2873.8	2957.4	4107.4	3569.5	4987.9	True	False	4410.218043450236	4114.554256562457	6103.3120229048745	4720.403453153227	3656.7251950085097	3429.121177749659	3620.6722325570054	3962.9404139035173	3403.5547241094396	4084.5429762607855	1.079733539121087	1.0073475246743875	1.494246004602498	1.1556748161515351	0.8952593267499602	0.8395360748263848	0.8864326446312892	0.9702286000994437	0.8332767567609829	1.0	11.995958947422714	-7.731392101543909	5.439688995246099	0.8977640013939822	1.1972289633662787	0.537715463608452	0.1273111112537579	0.14331565837354238	11.213856578782098	0.03964221320784221	0.04994066901111481	1.8561278985481587e-08	7.731392101543909	0.29946496197229655	
IGQQVDREPGDVAT(ph)PPR	ddPTM_K562_Methotrexat_30min_R1	4	IGQQVDREPGDVATPPR	17	1	H3BT22;Q9Y5N6	H3BT22	ORC6	Origin recognition complex subunit 6	1	IGQQVDREPGDVAT(1)PPR;IGQQVDREPGDVAT(1)PPR;IGQQVDREPGDVAT(1)PPR;IGQQVDREPGDVAT(1)PPR	132.51	5.5098e-10	248799000.0	6042.879999999999	5222.1	7447.9	6196.5	5768.32	5531.72	4791.68	7161.799999999999	7071.0	7458.8	True	False	5777.242230740206	6084.963264477017	5884.687571575646	5653.262465686896	6526.95518670405	6600.646600800805	5866.3362153576645	6909.9154346531195	6742.270753376623	6107.939042750242	0.945857872893713	0.9962383746608447	0.9634489686927078	0.9255597389101288	1.068601886990204	1.0806667444782994	0.9604444599558757	1.1313006541633344	1.1038536413324713	1.0	12.576469948767912	-7.7711622459076874	24.999216120930964	1.0603507170597037	0.9609287282987605	0.5000611693280117	0.04874619610593382	173.59930010209973	446353.0891242416	0.015298903417331214	0.01756006148515615	1.693704939466895e-08	7.7711622459076874	-0.09942198876094321	
IGRIEDVTPIPS(ph)DSTRR	ddPTM_K562_Methotrexat_30min_R1	1	IGRIEDVTPIPSDSTRR	17	2	P62263;A0A2R8Y811	P62263	RPS14	40S ribosomal protein S14	1	IGRIEDVTPIPS(0.428)DS(0.286)T(0.286)RR	92.47399999999999	0.0029168	7431400.0	1845.8	1667.7	3565.5	2247.2	2069.6	1878.0	1958.9	2101.4	1538.3	2021.8	True	False	1764.6608420985158	1943.2590789468466	2817.150275440455	2050.1914650030794	2341.788675802089	2240.896921084925	2398.2331900845056	2027.4925709151403	1466.784768762447	1655.6324283574368	1.0658530310675582	1.1737261518094122	1.7015553858384904	1.238313184670517	1.4144375500819297	1.353499051300978	1.44852996897615	1.2246030798796494	0.8859362402182791	1.0	10.693166696238725	-9.622679708950534	4.196972753980457	0.9470189681559508	1.3484168551826095	0.4776562077105686	0.16427144263686722	0.18933971210496633	5.893502659733905	0.12667381549691	0.043085559393933166	2.3840770717975406e-10	9.622679708950534	0.4013978870266587	
IGRIEDVTPIPSDS(ph)TR	ddPTM_K562_Methotrexat_30min_R1	1	IGRIEDVTPIPSDSTR	16	1	P62263;A0A2R8Y811	P62263	RPS14	40S ribosomal protein S14	1	IGRIEDVTPIPSDS(0.969)T(0.031)R	178.02	1.8092999999999998e-66	0.0	803.17	830.75	1992.8	984.41	751.68	779.71	876.88	911.03	574.94	822.27	True	False	767.8636084886037	968.0173171644136	1574.5385132233178	898.1083036951235	850.5390953937541	930.3779224383002	1073.5426615556194	878.9885585232802	548.2111648912961	673.3489350407898	1.1403650745242337	1.4376161701447905	2.3383693524783493	1.3337933082803768	1.2631476061400921	1.3817173741901592	1.5943333473759587	1.3053983050705102	0.8141561326715202	1.0	9.395210505004947	-9.601825119512805	3.9398728425957716	0.9129785672940955	1.5064380620837006	0.360321917249109	0.3105280169656849	0.25791346013011984	7.593873934686698	0.24982870885566094	0.08502529281189186	2.501352396514266e-10	9.601825119512805	0.593459494789605	
IGRIEDVTPIPSDS(ph)TRR	ddPTM_K562_Methotrexat_30min_R1	1	IGRIEDVTPIPSDSTRR	17	2	P62263;A0A2R8Y811	P62263	RPS14	40S ribosomal protein S14	1	IGRIEDVTPIPS(0.283)DS(0.359)T(0.359)RR	80.541	0.008755200000000001	11922000.0	1442.0	1339.0	2533.3	1624.6	1456.7	1407.0	1522.0	1357.9	1236.3	1564.6	True	False	1378.611406602047	1560.2469908915436	2001.5949495928505	1482.173840354221	1648.281582934337	1678.8828370428607	1863.3472435084075	1310.1418873349537	1178.8246828453566	1281.2357787160174	1.0760013336371343	1.2177672656434366	1.562237788581534	1.1568314474011743	1.2864779537971942	1.3103621245461494	1.4543359422695403	1.022561115681537	0.9200685013859888	1.0	10.323320275941835	-9.399155540281813	5.839682601344999	0.9641241570810564	1.2964206025221758	0.5458957276840148	0.13187221424594278	0.17577662658795148	7.567387690591268	0.0752339874958138	0.03513588691252115	3.988820192824604e-10	9.399155540281813	0.33229644544111947	
IGRIEDVTPIPSDST(ph)RR	ddPTM_K562_Methotrexat_30min_R1	2	IGRIEDVTPIPSDSTRR	17	2	P62263;A0A2R8Y811	P62263	RPS14	40S ribosomal protein S14	1	IGRIEDVTPIPS(0.003)DS(0.108)T(0.888)RR;IGRIEDVTPIPSDS(0.114)T(0.885)RR	121.13	0.00020628	34409000.0	1982.4499999999998	2141.2	3557.1	2762.2	2549.7	2466.3999999999996	2604.3999999999996	2344.1000000000004	1893.65	2380.6000000000004	True	False	1895.303871718606	2494.99690582298	2810.5133206476617	2520.0422145921625	2885.030240960855	2942.99689359098	3188.5029967104447	2261.6566743514713	1805.6146248241616	1949.4502715143494	0.972224785321822	1.2798463968433753	1.4416953136560038	1.2926937667584475	1.4799198949146515	1.5096547660612216	1.635590834658013	1.1601509961034284	0.9262173296790716	1.0	10.9288516381898	-9.5133907046277	6.176921115610473	0.9842219728279792	1.380318971128778	0.49061306862494003	0.1684532662265214	0.1302933174042744	21.88407044463386	0.11151656074948173	0.04658397164617152	3.066262243701845e-10	9.5133907046277	0.3960969983007988	
IGRIEDVTPIPSDSTR	ddPTM_K562_Methotrexat_30min_R1	2	IGRIEDVTPIPSDSTR	16	1	P62263;A0A2R8Y811	P62263	RPS14	40S ribosomal protein S14	0	;	137.39	1.0507000000000001e-05	14252600.0	2664.1000000000004	2010.0900000000001	2883.1	3060.7	2204.3	1986.7800000000002	2257.3	2459.3	2331.9	3104.1000000000004	False	True	2546.989353903269	2342.2232068119356	2277.9767098926854	2792.3731830433094	2494.2040868141403	2370.6971165458513	2763.556986052251	2372.805025055492	2223.4904779803346	2541.9174106560095	1.001995321809433	0.921439538905972	0.8961647220885878	1.0985302556791816	0.9812293965012988	0.9326412835474579	1.087193853925821	0.9334705427912099	0.8747296307343454	1.0	11.31170144121556														
IHIDPEIQDGS(ph)PTTSR	ddPTM_K562_Methotrexat_30min_R1	2	IHIDPEIQDGSPTTSR	16	0	C9J542;P50479-2;P50479	C9J542	PDLIM4	PDZ and LIM domain protein 4	1	IHIDPEIQDGS(0.759)PT(0.078)T(0.008)S(0.155)R;IHIDPEIQDGS(0.982)PT(0.009)T(0.009)S(0.001)R	159.4	2.8435e-10	243841000.0	4326.38	3762.96	4929.99	4277.88	3957.2799999999997	3670.9500000000003	3779.19	4111.09	4521.66	5113.59	True	False	4136.197515461141	4384.7251806163085	3895.252471299589	3902.8449022371733	4477.731682923316	4380.309133363527	4626.76955926054	3966.5006345120046	4311.449013535985	4187.469299299782	0.9877559021513986	1.0471062274652405	0.9302163652760257	0.9320294964048567	1.0693168983166208	1.0460516412851053	1.1049082939030064	0.9472309767561217	1.0296073130033299	1.0	12.031862897947246	-7.767144060674438	24.999977071497625	1.0344768109336033	0.9763318974180955	0.2518748116245225	0.04935733899267357	214.84478113555178	941523.5366658529	0.01593432121827458	0.01856299796733719	1.7094481766245203e-08	7.767144060674438	-0.05814491351550788	
IHIDPEIQDGSPTTS(ph)R	ddPTM_K562_Methotrexat_30min_R1	4	IHIDPEIQDGSPTTSR	16	0	C9J542;P50479-2;P50479	C9J542	PDLIM4	PDZ and LIM domain protein 4	1	IHIDPEIQDGS(0.331)PT(0.039)T(0.039)S(0.592)R;IHIDPEIQDGS(0.142)PT(0.016)T(0.016)S(0.827)R;IHIDPEIQDGS(0.015)PT(0.005)T(0.007)S(0.974)R;IHIDPEIQDGS(0.141)PT(0.018)T(0.008)S(0.833)R	142.97	3.8658e-07	580718000.0	12859.900000000001	11543.4	14075.099999999999	12249.000000000002	11614.6	11343.999999999998	10374.35	13535.7	13206.2	14246.5	True	False	12294.594194009478	13450.750645748647	11120.928857622197	11175.149187799369	13142.12347988545	13536.067450898508	12701.062073384655	13059.641758892201	12592.24664449757	11666.320798592455	1.0538536018564504	1.1529556642546195	0.9532507334243664	0.9578983280785193	1.1265011229136654	1.1602687500699997	1.0886947386974857	1.1194310515160746	1.0793674254197458	1.0	13.51006203035287	-7.794444249477385	24.98502316241657	1.1045592079637983	1.0328628144079455	0.19081458062210777	0.0651504381221605	304.4108119416473	230440.40038655142	0.0210316867797328	0.02384912556691963	1.6052983175330592e-08	7.794444249477385	-0.07169639355585278	
IHLDEK	ddPTM_K562_Methotrexat_30min_R1	2	IHLDEK	6	0	P37837	P37837	TALDO1	Transaldolase	0	;	113.08	0.0061604	14380700.0	14177.3	11246.900000000001	21995.0	16528.4	12375.8	11084.3	10201.5	13660.7	14044.3	18226.6	False	True	13554.082867419695	13105.259060386928	17378.55007945948	15079.380833996496	14003.43462214509	13226.18410137467	12489.44606087452	13180.245438041537	13391.383558428413	14925.586120634895	0.9081105933039996	0.8780398273451164	1.1643462400068376	1.0103040987548877	0.9382167312535276	0.8861416894770539	0.8367809451454394	0.8830638429548577	0.897209895155446	1.0	13.865499966096822	-7.996230769958386	3.609425387510601	0.8902526831116653	0.9939448655430676	0.20800766756345745	0.08076425320512606	0.34624614615059185	9.769374711257106	0.02823145344214347	0.030651824490016674	1.0087167443847074e-08	7.996230769958386	0.10369218243140232	
IHLGSS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	IHLGSSPK	8	0	Q5JW53;Q9H410-4;Q9H410	Q5JW53	DSN1	Kinetochore-associated protein DSN1 homolog	1	IHLGS(0.223)S(0.777)PK;IHLGS(0.135)S(0.865)PK	104.42	0.010131	48240000.0	14240.6	10702.8	20707.8	17245.8	10843.5	10119.1	9283.0	12840.5	12197.900000000001	17102.9	True	False	13614.600275212972	12471.255783505605	16361.515768830694	15733.887489831837	12269.610314099316	12074.472861634973	11364.9490548545	12388.892336935312	11630.822291417446	14005.39907951053	0.9720965606135934	0.8904605797167658	1.1682291719032192	1.1234158627332536	0.8760628843521768	0.8621298681377496	0.8114691334630424	0.884579744325878	0.8304527579248336	1.0	13.77369547269609	-7.815584083566886	10.39329695040371	0.8673893149445218	1.0371527745305498	0.4584987524922943	0.085348745792698	0.4266400794564612	79.51863686453439	0.02779921107508206	0.031568015425849597	1.5290296829834577e-08	7.815584083566886	0.169763459586028	
IHLPLNYPPGS(ph)PDLGR	ddPTM_K562_Methotrexat_30min_R1	1	IHLPLNYPPGSPDLGR	16	0	Q08174;Q08174-2	Q08174	PCDH1	Protocadherin-1	1	IHLPLNYPPGS(1)PDLGR	88.95100000000001	0.0075815	7212800.0	1807.5	1376.5	1723.4	1940.0	1277.6	1617.3	1269.1	1565.1	1779.5	1775.9	True	False	1728.0444642393907	1603.9432285005287	1361.6818916544892	1769.9232120443112	1445.6267936822333	1929.8203357138716	1553.7279807730097	1510.0545458928752	1696.7714334088105	1454.2673011771542	1.1882578002273916	1.1029218818316409	0.9363353563353024	1.2170549462341964	0.9940585149044285	1.3270052446010316	1.0683922959110386	1.0383610665457197	1.16675347925059	1.0	10.506076752433936	-12.435141453718565	2.9857559089160453	0.997702660390176	1.1118103256348622	0.09126971163376252	0.10874931155967513	62039469.98724106	85207581.12003712	1236320.0275347838	0.026936570619783533	3.6716269274483653e-13	12.435141453718565	0.11410766524468618	
IHQDSES(ph)GDELSSSSTEQIR	ddPTM_K562_Methotrexat_30min_R1	2	IHQDSESGDELSSSSTEQIR	20	0	Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6	Q1RLN5	ARHGAP12	Rho GTPase-activating protein 12	1	IHQDS(0.026)ES(0.974)GDELSSSSTEQIR;IHQDS(0.048)ES(0.951)GDELSSSSTEQIR	88.541	0.0013499	24824000.0	1831.94	1582.98	2216.2	1836.33	1708.1100000000001	1697.01	1679.68	1652.58	1883.46	1791.78	True	False	1751.4101111030202	1844.5405389406242	1751.0499061649512	1675.341799986252	1932.7564046309947	2024.9331650960232	2056.390997356243	1594.4578247087386	1795.8983557000045	1467.271279296808	1.193651191715813	1.2571230453203057	1.1934056986409116	1.141807805840214	1.3172454418635327	1.380067335650757	1.401507019439358	1.086682365562887	1.2239715866044154	1.0	10.518919915805677	-10.14245534313102	1.2855555758005208	1.005293717528309	1.2593177433130882	0.3932128529930802	0.09318458045543981	0.6977218111453984	2.3969397772604766	0.09523437541119746	0.02898299204022213	7.20351818499805e-11	10.14245534313102	0.25402402578477923	
IHQDSESGDELSS(ph)SSTEQIR	ddPTM_K562_Methotrexat_30min_R1	1	IHQDSESGDELSSSSTEQIR	20	0	Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6	Q1RLN5	ARHGAP12	Rho GTPase-activating protein 12	1	IHQDS(0.001)ES(0.139)GDELS(0.316)S(0.521)S(0.015)S(0.006)T(0.002)EQIR	81.639	0.0036455	8078200.0	434.09	525.36	819.73	705.4	567.57	421.3	522.26	797.13	629.32	623.23	True	False	415.00792336469004	612.1668104068564	647.6798752732586	643.5586772041527	642.2154033267259	502.71026243507936	639.3900994708937	769.094486082415	600.0630505607378	510.3570077778242	0.813171793548404	1.1994874197423648	1.2690721698784153	1.2609970420633778	1.2583650141751441	0.9850168701003245	1.2528290779329163	1.506973499651107	1.1757711590431725	1.0	8.995362992078682	-6.263163705214343	4.578430944715705	1.2286845805792213	0.7873363776456608	0.4192378203396241	0.14002681792641383	0.18049386503017226	10.005277833771082	0.03545606314308053	0.25637044828774413	5.45552179060567e-07	6.263163705214343	-0.4413482029335605	
IHRAS(ph)DPGLPAEEPK	ddPTM_K562_Methotrexat_30min_R1	1	IHRASDPGLPAEEPK	15	1	P27708;F8VPD4	P27708	CAD	CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase	1	IHRAS(1)DPGLPAEEPK	71.969	0.030756	80508000.0	4417.1	3269.4	6425.2	4196.4	3293.9	2914.9	2768.4	4475.4	3944.7	5261.8	True	False	4222.9295728862035	3809.6127797018735	5076.638325553224	3828.508127331312	3727.105585245701	3478.1631710705287	3389.284171438027	4317.997645319134	3761.3117580037842	4308.837032115518	0.9800624951491524	0.8841394444271801	1.1781922332441375	0.8885246990767767	0.8649910770507365	0.807216226825559	0.7865890833596887	1.0021260059582988	0.8729296861239344	1.0	12.073082818848395	-7.478042249097979	24.994755234842476	0.8795909312231238	1.0065032857278655	0.2662545054149906	0.09423761330884436	585.0009300498825	326116.9569259992	0.026480606519413415	0.0392748896929302	3.326271930337677e-08	7.478042249097979	0.1269123545047417	
IHRAS(ph)DPGLPAEEPKEK	ddPTM_K562_Methotrexat_30min_R1	3	IHRASDPGLPAEEPKEK	17	2	P27708;F8VPD4	P27708	CAD	CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase	1	IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK	105.95	0.0031284000000000004	116052000.0	9943.4	5836.3	15908.7	10987.6	5640.8	4366.2	4631.9	6665.6	7186.7	13252.3	True	False	9506.30004189098	6800.649374862073	12569.68127524879	10024.334167349516	6382.664071542532	5209.9063561453695	5670.721483052954	6431.167069901956	6852.591885630286	10852.18005258742	0.8759806781518014	0.6266620478012283	1.1582632442825969	0.9237161675141461	0.5881457956478294	0.4800792403829683	0.5225421487271507	0.5926152200514413	0.6314484142747395	1.0	13.405697268774684	-7.763126638947409	24.997495202575106	0.6019864204558208	0.8956280105398807	0.3252606880718314	0.17978595526729627	47.34066873338987	701376.4426305097	0.05397262815124839	0.06444059488000661	1.7253347162862112e-08	7.763126638947409	0.2936415900840599	
IHS(ph)PIIR	ddPTM_K562_Methotrexat_30min_R1	2	IHSPIIR	7	0	O60885	O60885	BRD4	Bromodomain-containing protein 4	1	IHS(1)PIIR;IHS(1)PIIR	96.66799999999999	0.0064051	19899600.0	2195.02	1794.85	2559.7	2417.2	1675.24	1446.78	1574.85	1921.8799999999999	1939.06	2044.5	True	False	2098.529549042737	2091.4184552663814	2022.4539503701956	2205.287828945108	1895.5634234879642	1726.3497590453928	1928.0502013398263	1854.2863910680462	1848.913523835734	1674.2212383899398	1.253436225107767	1.2491888212322826	1.2079968310013456	1.3172021584589875	1.1322060549840378	1.0311359809923233	1.151610167837787	1.1075515878960362	1.1043424139176443	1.0	10.709274468726122	-7.914525117570262	5.763917664081215	1.089283858888375	1.2520165462459758	0.7604907211810534	0.0470414863634567	0.1030522881945032	5.4418368822243295	0.014193417946359272	0.01614564628033255	1.2175165753203959e-08	7.914525117570262	0.1627326873576007	
IHTGEKPYTCEECGQAFS(ph)RSSTLANHK	ddPTM_K562_Methotrexat_30min_R1	1	IHTGEKPYTCEECGQAFSRSSTLANHK	27	2	Q8IYX0	Q8IYX0	ZNF679	Zinc finger protein 679	1	IHTGEKPY(0.001)T(0.001)CEECGQAFS(0.326)RS(0.326)S(0.326)T(0.021)LANHK	42.746	0.021854	21669000.0	833.35	539.08	861.52	1013.9	610.92	741.26	678.72	730.06	767.55	1134.2	True	False	796.7169318251154	628.153807206731	680.698725367399	925.0129611813022	691.2666881624529	884.4980041125725	830.9402372628291	704.3833759980532	731.8667680319935	928.7853893772894	0.8578051947600939	0.6763174942145473	0.732891293459922	0.9959383209090784	0.7442695546986557	0.9523168799043988	0.894652571806646	0.7583919644454269	0.7879826452940637	1.0	9.859201467276739	-7.1659733781430965	24.999999969181932	0.8646179851565949	0.747734722925245	0.23963381022345964	0.0965627689151446	75.5686035867479	19783.401138388548	0.025477612088072022	0.04412852285029767	6.823805221652716e-08	7.1659733781430965	-0.11688326223134993	
IIEDGDGAGAET(ph)PVIENR	ddPTM_K562_Methotrexat_30min_R1	4	IIEDGDGAGAETPVIENR	18	0	A0A5H1ZRS1;Q15154-5	A0A5H1ZRS1	PCM1	Pericentriolar material 1 protein	1	IIEDGDGAGAET(1)PVIENR;IIEDGDGAGAET(1)PVIENR;IIEDGDGAGAET(1)PVIENR;IIEDGDGAGAET(1)PVIENR	208.59	6.726099999999999e-122	59560000.0	5755.8	4709.34	5439.83	6295.900000000001	4274.780000000001	4886.389999999999	4916.82	5456.13	6107.22	6618.33	True	False	5502.781923800323	5487.478389906781	4298.084022675433	5743.948222015347	4836.98849804081	5830.61571151234	6019.542045878452	5264.234815336074	5823.2966752138	5419.686304071061	1.0153321825410528	1.0125084888741247	0.7930503319808152	1.0598303849617112	0.8924849569997158	1.0758216222095	1.1106808970395208	0.9713172534325061	1.0744711683477994	1.0	12.403993634274764	-8.275244675713711	24.695816995632033	1.0486794387637124	0.954722677941756	0.2544756132725775	0.07853185146253776	967.8342231392015	1731319.2253002939	0.027006701417498127	0.023939778469785754	5.305854352586206e-09	8.275244675713711	-0.09395676082195636	
IIEQLS(ph)PQAATSR	ddPTM_K562_Methotrexat_30min_R1	1	IIEQLSPQAATSR	13	0	Q03468;D6R9X7;P0DP91	Q03468	ERCC6	DNA excision repair protein ERCC-6	1	IIEQLS(1)PQAATSR	103.66	0.0037473	31560000.0	1578.5	1372.1	1934.9	1633.6	1167.4	1324.8	1014.8	1534.0	1517.7	1759.4	True	False	1509.111030042533	1598.8162032877417	1528.7909319730006	1490.3848243276207	1320.933562104445	1580.798850401123	1242.3947323996922	1480.048350520523	1447.142458266115	1440.7556110654232	1.0474441455942425	1.1097067337502398	1.0611035766450885	1.0344466562413712	0.9168338835256237	1.097201245138403	0.8623216337717087	1.0272723140228086	1.004432984436527	1.0	10.492609923016214	-7.460605461520775	3.66811924068689	0.9848173075857969	1.0754570445601102	0.2947020346129453	0.06096984844970267	0.283440569616349	7.511219043225194	0.017092711126138804	0.02541486292633926	3.4625379216157255e-08	7.460605461520775	0.09063973697431327	
IIFDDFR	ddPTM_K562_Methotrexat_30min_R1	1	IIFDDFR	7	0	P46977;P46977-2	P46977	STT3A	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A	0		123.99	0.018713	6790200.0	7063.4	5185.1	5259.7	6001.8	5593.5	4197.0	5154.6	7662.8	7257.7	8382.5	False	True	6752.901393476353	6041.849643369488	4155.760848053332	5475.631512395641	6329.14329247148	5008.010850795227	6310.650263724333	7393.294980683617	6920.291111127356	6864.348021914242	0.9837644262671271	0.8801782229107629	0.6054123180797623	0.7976914187501621	0.9220312362173165	0.7295683194976843	0.9193371669935376	1.0770571301281238	1.0081498037445824	1.0	12.744906983880902	-9.012857036345142	5.024486807757554	1.0281294992080319	0.8163016430450116	0.4682997286088064	0.09971895581392798	0.16908461107722747	12.29445240821676	0.048218527019988244	0.029309890633307776	9.708294981103122e-10	9.012857036345142	-0.21182785616302025	
IIFEDDR	ddPTM_K562_Methotrexat_30min_R1	2	IIFEDDR	7	0	D6RC06;D6REP8;D6RE99;D6RD60;P49773	D6RC06	HINT1	Histidine triad nucleotide-binding protein 1	0	;	133.47	0.00059326	96659000.0	10506.2	8830.1	11868.5	9961.9	8972.8	9005.6	8426.7	10754.6	10569.4	10648.0	False	True	10044.360027768675	10289.123938962966	9377.464042649011	9088.555693847533	10152.880474602323	10745.804745752082	10316.601982176273	10376.354622234696	10078.030900967178	8719.54401877039	1.1519363863691015	1.1800071100981626	1.075453489593301	1.0423200656230165	1.164382042541034	1.2323815009844323	1.183158426629641	1.1900111519475929	1.1557979269641165	1.0	13.090036977111646														
IIGVHQEDELLECLS(ph)PATSR	ddPTM_K562_Methotrexat_30min_R1	2	IIGVHQEDELLECLSPATSR	20	0	Q93009;A0A669KBL1;Q93009-3;H3BND8	Q93009	USP7	Ubiquitin carboxyl-terminal hydrolase 7;Ubiquitin carboxyl-terminal hydrolase	1	IIGVHQEDELLECLS(0.575)PAT(0.072)S(0.352)R;IIGVHQEDELLECLS(0.564)PAT(0.218)S(0.218)R	117.51	5.1905e-05	15690000.0	2340.31	1946.2	2772.1	2852.5	2140.8	2198.2799999999997	2338.2200000000003	2913.7	2524.3	2973.7	True	False	2237.4327746080703	2267.7764702562513	2190.2740929879365	2602.4257537919575	2422.3527237906424	2623.0664982335297	2862.6253559239344	2811.223519499118	2406.945843975195	2435.134114257843	0.9188129563409996	0.9312737466812593	0.8994470079342909	1.0686991482541404	0.9947512580960675	1.0771753731654172	1.1755514159007123	1.1544429947571475	0.9884243458634973	1.0	11.249785515140758	-7.47959096621753	1.246216668107589	1.089491013723207	0.9098168183783442	0.5099704952073987	0.06361460303076856	0.3656601587104395	1.146287004983974	0.02399505784751641	0.04723386415295678	3.3144313930381154e-08	7.47959096621753	-0.17967419534486284	
IIITEPS(ph)D	ddPTM_K562_Methotrexat_30min_R1	5	IIITEPSD	8	0	Q9NSI8;A0A2R8Y4K8;Q9NSI8-3;S6FRS6;Q9NSI8-2	Q9NSI8	SAMSN1	SAM domain-containing protein SAMSN-1	1	IIITEPS(1)D;IIITEPS(1)D;IIIT(0.001)EPS(0.999)D;IIITEPS(1)D;IIITEPS(1)D	114.89	0.0050182	47886100.0	23810.9	21049.8	25520.4	26175.4	21841.0	20955.199999999997	21036.7	24253.2	24124.5	26215.3	True	False	22764.201346366634	24527.921664577163	20164.016796901007	23880.64332193022	24713.474327499727	25004.49582572888	25754.71547799822	23400.20120915538	23002.95726061863	21467.455138549158	1.060405213354279	1.1425630800798703	0.9392830527309424	1.1124114697250582	1.1512065201953856	1.1647629243593132	1.1997097612073457	1.0900314479817212	1.0715269747699236	1.0	14.389863556465604	-7.49541374241647	24.874400119100457	1.124992518652159	1.0517509664229154	0.14216136359598253	0.06966079495186801	1166.0353479242715	1056050.7928891703	0.019520602048579448	0.02886635478568752	3.195849046697151e-08	7.49541374241647	-0.07324155222924356	
IILDLISES(ph)PIKGR	ddPTM_K562_Methotrexat_30min_R1	2	IILDLISESPIKGR	14	1	Q5T6W2;P61978-3;P61978;P61978-2	Q5T6W2	HNRNPK	Heterogeneous nuclear ribonucleoprotein K	1	IILDLIS(0.019)ES(0.981)PIKGR;IILDLIS(0.223)ES(0.777)PIKGR	104.78	0.0017144000000000003	356380000.0	9305.900000000001	6809.2	11932.2	9830.4	6554.5	7015.200000000001	6495.400000000001	9557.2	9462.6	12673.0	True	False	8896.823778570042	7934.304563389612	9427.794283161013	8968.584094680617	7416.531636811357	8370.788115439276	7952.158794667872	9221.067858927478	9022.68579138759	10377.796896119193	0.8572940738411479	0.76454614045845	0.9084581609692673	0.8642088667233837	0.7146537662135969	0.8066055058920605	0.7662665664271773	0.8885380925479205	0.8694220827121457	1.0	13.341212585827925	-10.089211023710467	1.2863859535786544	0.997646187824011	0.8135921954688461	0.4941465761553243	0.05608839366621385	0.4804109200012208	1.7279443779590857	0.054758324277611924	0.01672830550206179	8.143085153283075e-11	10.089211023710467	-0.18405399235516495	
IILDLISESPIK	ddPTM_K562_Methotrexat_30min_R1	1	IILDLISESPIK	12	0	Q5T6W2;P61978-3;P61978;P61978-2	Q5T6W2	HNRNPK	Heterogeneous nuclear ribonucleoprotein K	0		81.771	0.025664999999999997	0.0	331.34	344.58	356.5	383.37	191.12	250.26	166.3	372.73	333.12	376.44	False	True	316.7746903353139	401.5159881414547	281.67552186075517	349.7605473203233	216.2556299378118	298.6192031260456	203.59700827559016	359.620874634625	317.63332390960574	308.2630682218189	1.027611553218468	1.3025108406840782	0.9137504647753264	1.1346170961636046	0.7015294799511931	0.9687154703565274	0.6604651327517654	1.1666038254568019	1.0303969455109823	1.0	8.26801824598979	-6.780173119301462	24.905728197641526	0.9414344697373564	1.1650612282841128	0.2160368205195089	0.16587908654811861	292.27401375197917	388566.34935870726	0.04291296131752001	0.08958036738666476	1.6589254915495676e-07	6.780173119301462	0.2236267585467564	
IILNSHS(ph)PAGSAAISQQDFHPK	ddPTM_K562_Methotrexat_30min_R1	2	IILNSHSPAGSAAISQQDFHPK	22	0	Q9UPU5	Q9UPU5	USP24	Ubiquitin carboxyl-terminal hydrolase 24	1	IILNS(0.108)HS(0.882)PAGS(0.011)AAISQQDFHPK;IILNS(0.023)HS(0.976)PAGS(0.002)AAISQQDFHPK	109.37	1.9954000000000002e-05	44693000.0	6194.1	4603.2	7568.7	6505.1	4827.2	3909.4	4620.5	5880.5	5955.1	7569.1	True	False	5921.8147806059205	5363.800558978308	5980.13330240532	5934.807982819305	5462.061410819403	4664.836221133869	5656.764742858475	5673.679481900873	5678.2487008107955	6198.26264392139	0.9553991369522586	0.8653716157443836	0.9648079866815601	0.957495402141364	0.8812245825329819	0.7526038325769648	0.9126371481540945	0.9153660965730496	0.9161032739358713	1.0	12.597648173347874	-10.329373141146355	1.517034385643843	0.9997869300276148	0.8976302303369027	0.20526537861020178	0.05848736323368475	2.2183952904905566	7.766398258917333	0.05991467146105783	0.017368089603043643	4.684107557221184e-11	10.329373141146355	-0.10215669969071206	
IINEPTAAAIAYGLDR	ddPTM_K562_Methotrexat_30min_R1	1	IINEPTAAAIAYGLDR	16	0	A0A0G2JIW1;P0DMV8-2;P0DMV9;P0DMV8;P17066	A0A0G2JIW1;P17066	HSPA1A;HSPA1B;HSPA6	Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 6	0		106.58	0.010388	5373900.0	491.68	386.22	486.49	437.6	386.33	201.71	349.61	481.93	440.89	510.51	False	True	470.066335921009	450.0362903824734	384.38239727921115	399.23628741782994	437.1391665648533	240.6876027433654	428.01894205188864	464.9802487394754	420.3931201324029	418.0516920569566	1.1244215604250343	1.0765087163459182	0.919461407721899	0.9549926360863451	1.0456581682853139	0.5757364634959388	1.0238421472375576	1.1122553922736549	1.0056008099475107	1.0	8.70753753223252	-6.65109674858144	4.626226534873102	0.9510787456595461	1.113017088643952	0.15566079011932876	0.13707104442991278	0.38492068182899664	13.494151162826245	0.036930968211871223	0.10529695662312775	2.2330747012525247e-07	6.65109674858144	0.16193834298440601	
IIPELVGS(ph)PTQSTSSR	ddPTM_K562_Methotrexat_30min_R1	3	IIPELVGSPTQSTSSR	16	0	Q9NSI6-3;Q9NSI6-2;Q9NSI6;H7C409	Q9NSI6-3	BRWD1	Bromodomain and WD repeat-containing protein 1	1	IIPELVGS(0.938)PT(0.061)QSTSSR;IIPELVGS(0.931)PT(0.068)QSTSS(0.001)R;IIPELVGS(0.483)PT(0.228)QS(0.032)T(0.103)S(0.103)S(0.05)R	211.45	3.6139999999999997e-22	136106000.0	5858.4	5098.1	6719.3	6406.2	5305.5	4949.3	5050.8	5618.6	5554.200000000001	5846.7	True	False	5600.8717506500925	5940.474372116639	5309.0107546675235	5844.578392267147	6003.266244427898	5905.682178661142	6183.570471427242	5420.990653347204	5295.986454306948	4787.805974318637	1.1698201181695056	1.2407508583223321	1.1088608818203123	1.2207216465364183	1.2538658159141955	1.2334840238595075	1.2915248664201018	1.1322494441973867	1.10614057518499	1.0	12.225148972958518	-9.85983972709206	1.7884042716022315	1.0066168603463013	1.2149632687177443	0.6486746534376706	0.05002202859823273	0.20543437236396386	1.3893532687759262	0.04863794281215314	0.014120754495625477	1.3808937783947927e-10	9.85983972709206	0.20834640837144303	
IIPELVGSPT(ph)QSTSSR	ddPTM_K562_Methotrexat_30min_R1	1	IIPELVGSPTQSTSSR	16	0	Q9NSI6-3;Q9NSI6-2;Q9NSI6;H7C409	Q9NSI6-3	BRWD1	Bromodomain and WD repeat-containing protein 1	1	IIPELVGS(0.335)PT(0.483)QS(0.066)T(0.066)S(0.033)S(0.017)R	131.61	0.00016504	21022000.0	972.45	1015.6	1339.9	877.32	938.31	1071.8	1050.9	995.92	930.09	1189.3	True	False	929.702262378752	1183.4106377516443	1058.6733008169026	800.4067177271725	1061.7142116311643	1278.910181053686	1286.5910763488735	960.8929291071698	886.8503189093575	973.9062454473728	0.9546116648545412	1.2151176186451436	1.0870382090327302	0.8218519200064255	1.09016059460986	1.3131758698869487	1.3210625584990123	0.9866380194181574	0.9106115943449716	1.0	9.927639085554217	-9.499126121002808	24.64984892497685	0.9530787113520489	1.1158607244770178	0.18446961218802937	0.14451011179126072	1081.0531244779447	1121895.692856269	0.08693713658029803	0.041350241029450036	3.16864714053249e-10	9.499126121002808	0.16278201312496887	
IIS(ph)NASCTTNCLAPLAK	ddPTM_K562_Methotrexat_30min_R1	2	IISNASCTTNCLAPLAK	17	0	P04406;P04406-2;E7EUT5	P04406	GAPDH	Glyceraldehyde-3-phosphate dehydrogenase	1	IIS(0.984)NAS(0.016)CTTNCLAPLAK;IIS(0.975)NAS(0.024)CTTNCLAPLAK	114.06	0.0013504	0.0	1132.8799999999999	1042.85	1166.06	1118.48	863.58	767.22	665.05	926.0799999999999	1099.03	1198.5	True	False	1083.0799516722102	1215.16323708084	921.3199411527404	1020.4245949522273	977.1559067690216	915.4744067064842	814.2043917840115	893.509241492859	1047.936335183639	981.4400362975503	1.1035620227580007	1.2381431286062088	0.9387429767267179	1.0397217937040197	0.9956348535110812	0.932786897669348	0.8296017705325843	0.9104063503090752	1.0677538070863135	1.0	9.938756314848888	-6.769283448328829	24.998505484028353	0.9590034433982217	1.1708525870568627	0.5732878948239224	0.07115125236935159	109.43465935980468	348764.4310349438	0.0195216086625387	0.0418599412648349	1.701047933445748e-07	6.769283448328829	0.21184914365864094	
IISPGSSTPSSTRS(ph)PPPGRDESYPR	ddPTM_K562_Methotrexat_30min_R1	2	IISPGSSTPSSTRSPPPGRDESYPR	25	2	Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5	Q5VT52-2	RPRD2	Regulation of nuclear pre-mRNA domain-containing protein 2	1	IIS(0.049)PGS(0.14)S(0.049)T(0.053)PS(0.041)S(0.041)T(0.041)RS(0.587)PPPGRDESYPR;IIS(0.02)PGS(0.076)S(0.076)T(0.291)PS(0.076)S(0.056)T(0.056)RS(0.34)PPPGRDES(0.008)Y(0.002)PR	65.248	0.010578	116507000.0	1469.02	1112.8400000000001	1422.43	1508.99	1124.4099999999999	1209.76	1289.1399999999999	1010.19	1395.02	1547.28	True	False	1404.4436397548823	1296.7178949542526	1123.881381656084	1376.6991895581164	1272.2896235787714	1443.528998536581	1578.2624609043542	974.6610451188578	1330.1658246889342	1267.052598550249	1.1084335736036806	1.0234128373501987	0.8870045197350288	1.0865367318873138	1.004133234117127	1.1392810371000026	1.2456171612056113	0.7692348733068042	1.0498110545772912	1.0	10.307260700295126	-9.266886203883205	24.999939552845618	0.9321422471834735	1.0624471391002557	0.2235625091023956	0.11083479995719712	737.7510505623217	3386114.9193567284	0.05935783301082919	0.029758265196227478	5.408960327929745e-10	9.266886203883205	0.13030489191678218	
IITLAGP	ddPTM_K562_Methotrexat_30min_R1	1	IITLAGP	7	0	F8VTZ0	F8VTZ0	PCBP2		0		48.242	0.0339	1945300.0	1063.5	982.57	1119.4	1210.3	645.95	898.48	859.59	1262.6	1059.7	864.19	False	True	1016.7498133989441	1144.9229916656484	884.453237506113	1104.1948781119738	730.9037471658099	1072.0985440129843	1052.3749389273269	1218.193642351507	1010.4347782991383	707.6768168276844	1.4367431420980366	1.6178613802809243	1.2497982362498004	1.5603095252742176	1.032821380870219	1.514955016922696	1.4870840953146196	1.721398261726766	1.4278195276039032	1.0	9.46694684781062														
IKEELIAQGLLESEDRPAEDS(ph)EDEVLAELR	ddPTM_K562_Methotrexat_30min_R1	1	IKEELIAQGLLESEDRPAEDSEDEVLAELR	30	2	O75528-2;O75528	O75528-2	TADA3	Transcriptional adapter 3	1	IKEELIAQGLLES(0.006)EDRPAEDS(0.994)EDEVLAELR	57.156000000000006	0.0010712999999999999	8844900.0	2421.2	1703.6	3516.1	2771.2	1588.4	1646.7	1640.5	2241.6	2078.6	3488.0	True	False	2314.7669470630203	1985.0909437511823	2778.1186603495103	2528.253198565564	1797.3024413625994	1964.9014696222287	2008.4238850036422	2162.761657449025	1981.9663396929207	2856.2894005889502	0.8104105090281569	0.6949894304624272	0.9726320658462264	0.8851530233751009	0.6292438157674101	0.6879210031088158	0.7031584000520105	0.7571927610007151	0.6938954922719843	1.0	11.479926445976682	-3.5535220171202853	16.863016488174612	0.7731688889541869	0.8193551696626578	0.0	0.12275989964443149	0.0	0.0	0.02835252492513544	0.0	0.0002795618996468592	3.5535220171202853	0.04618628070847086	
IKEEPVSEEGEEDEEQEAEEEPMDTS(ph)PSGLHSK	ddPTM_K562_Methotrexat_30min_R1	1	IKEEPVSEEGEEDEEQEAEEEPMDTSPSGLHSK	33	1	A0A0C4DH01;Q9NVU0-3;Q9NVU0-2;Q9NVU0-5;Q9NVU0-4;Q9NVU0	A0A0C4DH01	POLR3E	DNA-directed RNA polymerase III subunit RPC5	1	IKEEPVS(0.014)EEGEEDEEQEAEEEPMDT(0.437)S(0.508)PS(0.041)GLHS(0.001)K	51.236000000000004	0.0019942000000000002	19462000.0	2268.1	1215.0	3488.2	2633.1	1540.8	1241.2	1220.5	1761.6	1925.9	2867.2	True	False	2168.3970397462576	1415.7580985311617	2756.074489073452	2402.2602111514816	1743.4422070331746	1481.0443335732755	1494.2281936281274	1699.6435295156139	1836.3653293633204	2347.922296263944	0.9235386721258406	0.6029833699283581	1.1738354772042356	1.023142978357504	0.7425468082173634	0.6307893306051651	0.6364044483097971	0.72389258035503	0.7821235533583789	1.0	11.197168948369997	-7.839775498876131	8.03821710188211	0.7258589738827952	0.9244476446924792	0.2098267849968133	0.16455943614600174	0.3725697777591306	33.48604188264738	0.05213711971089115	0.0592830316720977	1.4461871593361673e-08	7.839775498876131	0.198588670809684	
IKGS(ph)SPGIQDTLEAEDGAFETDEAPEDR	ddPTM_K562_Methotrexat_30min_R1	4	IKGSSPGIQDTLEAEDGAFETDEAPEDR	28	1	Q9UNX4	Q9UNX4	WDR3	WD repeat-containing protein 3	1	IKGS(0.498)S(0.498)PGIQDT(0.005)LEAEDGAFETDEAPEDR;IKGS(0.483)S(0.483)PGIQDT(0.034)LEAEDGAFETDEAPEDR;IKGS(0.446)S(0.446)PGIQDT(0.107)LEAEDGAFETDEAPEDR;IKGS(0.5)S(0.5)PGIQDTLEAEDGAFETDEAPEDR	116.55	1.0658e-12	167921000.0	3641.6099999999997	3100.21	5825.0	4459.81	2892.5299999999997	2831.21	2533.01	3981.1099999999997	3585.87	5223.2	True	False	3481.529184740694	3612.467007940157	4602.412103334917	4068.825381601719	3272.9483950607905	3378.301263016427	3101.101971931165	3841.092104785372	3419.1636863824965	4277.227866157165	0.8139686015532861	0.8445813786361922	1.0760268677174571	0.9512762726053491	0.7652031870823239	0.7898342965888394	0.7250261311697009	0.8980330777271319	0.7993877795092575	1.0	12.062460352437018	-7.752440214872876	24.993521350632278	0.8172673440684814	0.9270119867373121	0.16896720777771235	0.09724891545749692	305.5117590743404	848498.5187070095	0.02933319009450622	0.03731227080443565	1.768315627914955e-08	7.752440214872876	0.10974464266883066	
IKNENTEGS(ph)PQEDGVELEGLK	ddPTM_K562_Methotrexat_30min_R1	4	IKNENTEGSPQEDGVELEGLK	21	1	P11388;P11388-2;P11388-3;P11388-4	P11388	TOP2A	DNA topoisomerase 2-alpha	1	IKNENT(0.004)EGS(0.996)PQEDGVELEGLK;IKNENTEGS(1)PQEDGVELEGLK;IKNENTEGS(1)PQEDGVELEGLK;IKNENTEGS(1)PQEDGVELEGLK	118.15	7.3549000000000005e-06	242842000.0	15694.599999999999	9464.699999999999	26667.1	14893.900000000001	10441.2	8336.9	7747.999999999999	12623.5	12546.2	19863.3	True	False	15004.684176183417	11028.580802607305	21070.040137483706	13588.174911271535	11814.400812613432	9947.88793471402	9485.686230422556	12179.52434993209	11962.929900440358	16265.863890687628	0.9224646337274315	0.6780199857027747	1.2953532796709628	0.8353798484106892	0.7263309770701633	0.6115806698966223	0.5831652283684242	0.748778203960319	0.7354623142573606	1.0	13.989559826442088	-7.576803146352447	4.948650884747567	0.7107849810478739	0.9556675101331331	0.2500786178063513	0.17521371767094981	0.2541394619316573	13.186433409955164	0.05174931928325443	0.06835347678574469	2.6497009024040746e-08	7.576803146352447	0.2448825290852592	
IKNENTEGS(ph)PQEDGVELEGLKQR	ddPTM_K562_Methotrexat_30min_R1	2	IKNENTEGSPQEDGVELEGLKQR	23	2	P11388;P11388-2;P11388-3;P11388-4	P11388	TOP2A	DNA topoisomerase 2-alpha	1	IKNENTEGS(1)PQEDGVELEGLKQR;IKNENT(0.034)EGS(0.966)PQEDGVELEGLKQR	127.37	1.2927e-07	109626000.0	2883.1000000000004	1861.7799999999997	4902.5	2855.0	2077.27	1867.72	1510.28	2356.9300000000003	2463.7	4114.0	True	False	2756.362376126464	2169.407500150902	3873.5322466265125	2604.7065826734574	2350.4674152413036	2228.630456575472	1848.9987351681184	2274.03543597936	2349.1631247481237	3368.9147345249244	0.8181751671774379	0.6439484733521539	1.1497863709432077	0.7731589511542702	0.6976927587847546	0.6615277120956129	0.5488410603626807	0.6750053400505663	0.6973056042866566	1.0	11.718068199724689	-5.917909563359502	18.786736575330494	0.7502921606094876	3.1840899903836823	0.006657021886627645	0.17131419957928543	1392.4940940128904	341598.65792841825	0.04275499093462417	10249.557921715563	1.2080653741060592e-06	5.917909563359502	2.433797829774195	
IKS(ph)GEAIIANANY(ph)HDT(ph)S(ph)PYR	ddPTM_K562_Methotrexat_30min_R1	2	IKSGEAIIANANYHDTSPYR	20	1	E7EMR3;E7ES20;E7ENK1;E7ESV6;E7EUP0;E7EX52;E7EN28;E9PBG4;E7EW95;E7EVD6;E7ETE3;E7EUW2;Q9HAR2-3;Q9HAR2-2;Q9HAR2;Q9HAR2-4	E7EMR3	ADGRL3;LPHN3	Latrophilin-3	4	IKS(1)GEAIIANANY(0.74)HDT(0.781)S(0.74)PY(0.74)R;IKS(1)GEAIIANANY(0.983)HDT(0.714)S(0.651)PY(0.651)R	104.01	8.2441e-05	133134000.0	5494.0	5613.4	6112.2	6349.299999999999	5571.8	5644.1	5238.7	6085.9	6230.2	6109.1	True	False	5252.490338329852	6540.918938514257	4829.3327481551405	5792.666726924193	6304.589362115421	6734.742445311731	6413.611829545004	5871.85544747904	5940.559361856461	5002.68279161065	1.0499347164561625	1.307482247222067	0.9653485838146258	1.1579120580338058	1.260241679262181	1.3462261602126149	1.2820344796396925	1.1737413088285282	1.187474722926387	1.0	12.288486261981966	-6.220537600034541	22.2184431277588	1.1945902347191668	1.0499329249144487	0.10421566151921013	0.1182972381788954	13106.708685453901	7119130.129841313	0.02996922184478708	7.80616621093059	6.01814157211808e-07	6.220537600034541	-0.14465730980471814	
IKTEPSS(ph)PLSDPSDIIR	ddPTM_K562_Methotrexat_30min_R1	2	IKTEPSSPLSDPSDIIR	17	1	Q9ULJ3;Q9ULJ3-2	Q9ULJ3	ZBTB21	Zinc finger and BTB domain-containing protein 21	1	IKTEPS(0.042)S(0.929)PLS(0.028)DPS(0.002)DIIR;IKT(0.007)EPS(0.275)S(0.69)PLS(0.015)DPS(0.013)DIIR	161.1	1.3762000000000001e-08	35490000.0	3249.2	2354.27	4916.200000000001	3863.0	2356.5	2388.0	2062.81	2862.3999999999996	3108.3	4206.2	True	False	3106.3690584822293	2743.273101752226	3884.3568038480885	3524.336787694418	2666.4210545649494	2849.447203168693	2525.44765268172	2761.7277695762364	2963.795811444004	3444.416421088659	0.9018564188299902	0.7964406060069746	1.127725666404871	1.0232028758533498	0.7741285398129032	0.827265595914237	0.7332004449925119	0.8017984563850591	0.8604638490566865	1.0	11.750043856061877	-7.765643208014671	24.999998403693866	0.8176417504532183	0.9622745023529842	0.26701298980557153	0.10329241892323276	136.67951119590518	812827.2881463247	0.03249629419540783	0.038163550566289534	1.7153659772535767e-08	7.765643208014671	0.14463275189976588	
IKTEPSSPLSDPS(ph)DIIR	ddPTM_K562_Methotrexat_30min_R1	1	IKTEPSSPLSDPSDIIR	17	1	Q9ULJ3;Q9ULJ3-2	Q9ULJ3	ZBTB21	Zinc finger and BTB domain-containing protein 21	1	IKTEPS(0.05)S(0.05)PLS(0.006)DPS(0.893)DIIR	114.01	0.0017919000000000001	11590000.0	1656.0	1052.0	2490.8	2044.8	1223.4	1141.3	1270.6	1637.3	1605.3	1809.2	True	False	1583.2042228384112	1225.825119057433	1968.015118795986	1865.535558756807	1384.2985436684748	1361.8400724356898	1555.5643939564923	1579.7152309695264	1530.669953386436	1481.536348493557	1.0686232737038355	0.8274013123632545	1.3283610090276126	1.2591898677705105	0.9343669124797683	0.9192080058112811	1.0499670801450183	1.0662682914096564	1.0331639550678853	1.0	10.532878306943804	-7.790281720134336	24.99993782048155	1.0022183258678394	1.11474945831889	0.1691709494382705	0.1303951779996492	452.153557102741	391914.7684230597	0.043878557884728144	0.04976183249835761	1.6207583953026297e-08	7.790281720134336	0.11253113245105051	
IKVEPVALAPS(ph)PVIPR	ddPTM_K562_Methotrexat_30min_R1	2	IKVEPVALAPSPVIPR	16	1	Q5VWG9	Q5VWG9	TAF3	Transcription initiation factor TFIID subunit 3	1	IKVEPVALAPS(1)PVIPR;IKVEPVALAPS(1)PVIPR	144.72	1.8328e-09	17940700.0	5302.200000000001	4136.299999999999	6840.1	5827.0	3847.6000000000004	3904.4	3432.6	4532.5	4754.1	7015.1	True	False	5069.1216366750195	4819.753269921348	5404.456485497199	5316.155957001134	4353.626840460049	4658.870041897754	4202.4479290847285	4373.0894059545435	4533.082928670316	5744.597412291155	0.8824154719404904	0.8390062738964078	0.9407894231080163	0.9254183671124931	0.7578645687415828	0.8110002681701636	0.7315478574866118	0.7612525460179108	0.7891036748669837	1.0	12.48799007541989	-7.759608363130532	24.999988123733733	0.7928053675059927	0.8959060292179286	0.23747654727254663	0.07453078825936413	59.00115189006723	805567.7564693998	0.021378161975423915	0.026193405220050557	1.7393686447494305e-08	7.759608363130532	0.10310066171193588	
ILDSVGIEADDDRLNK	ddPTM_K562_Methotrexat_30min_R1	1	ILDSVGIEADDDRLNK	16	1	P05387	P05387	RPLP2	60S acidic ribosomal protein P2	0		126.77	0.00050331	11592000.0	1881.7	1298.8	2600.1	1639.0	1450.5	1166.2	1230.8	1930.5	2075.1	2548.1	False	True	1798.9827210839612	1513.404624174709	2054.374542468861	1495.311414711662	1641.266174261176	1391.5516450315451	1506.8382308213854	1862.6032207821827	1978.6290539289823	2086.614398406165	0.8621538902722479	0.7252919491644957	0.9845492027842182	0.7166208648104018	0.7865689873101792	0.6668944899903235	0.7221450364630693	0.8926437113656023	0.9482485386089227	1.0	11.026948303029497	-9.534204972721621	3.084680523709737	0.973243166636839	0.7801312119787753	0.4562637385679782	0.08588700316559277	0.24448900000091156	4.627663569530924	0.06733845632129891	0.023458031409783756	2.922772599658893e-10	9.534204972721621	-0.19311195465806363	
ILEGPQQSLS(ph)GSPLQPIPASPPPQIPPGLRPR	ddPTM_K562_Methotrexat_30min_R1	1	ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR	32	1	O15446;O15446-2	O15446	CD3EAP	DNA-directed RNA polymerase I subunit RPA34	1	ILEGPQQS(0.085)LS(0.471)GS(0.338)PLQPIPAS(0.105)PPPQIPPGLRPR	66.738	6.1445e-05	48839000.0	680.54	463.82	968.14	541.36	566.57	594.64	512.07	686.94	687.71	757.35	True	False	650.6242764555878	540.4583714080029	764.9406444159081	493.89980931562263	641.0838857987966	709.5457641927263	626.9147325777592	662.7799308387016	655.7385122054361	620.1865761284524	1.0490782959494938	0.8714448074349543	1.233404065581507	0.7963729437660815	1.033695198307575	1.1440843634863938	1.010848600579696	1.0686782919039306	1.0573245817394477	1.0	9.276558489084655	-7.990610243150693	24.998701212152845	1.0611174684286326	0.9866136115800346	0.07538619469798702	0.1129070820883816	523.0051368120945	1392408.2967233353	0.033348017866382786	0.0377600292676023	1.0218561353853026e-08	7.990610243150693	-0.07450385684859806	
ILEGPQQSLSGS(ph)PLQPIPASPPPQIPPGLRPR	ddPTM_K562_Methotrexat_30min_R1	1	ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR	32	1	O15446;O15446-2	O15446	CD3EAP	DNA-directed RNA polymerase I subunit RPA34	1	ILEGPQQS(0.023)LS(0.275)GS(0.582)PLQPIPAS(0.12)PPPQIPPGLRPR	84.398	4.013500000000001e-06	51846000.0	495.45	418.75	703.53	638.98	308.4	451.31	263.74	473.42	446.84	519.73	True	False	473.67061123507955	487.9413199670155	555.868667306303	582.9616154804504	348.9600056133378	538.5192702102435	322.89040867470897	456.7695502629894	426.0665059311004	425.6018607133299	1.1129429989830966	1.1464736529798096	1.3060766848496372	1.3697346494288762	0.8199212405426598	1.265312302224568	0.7586677561360482	1.073232033096427	1.0010917368100594	1.0	8.7333606480293	-7.7562402327382225	24.999995222377816	0.9925943649492732	1.2327310076357012	0.40957217491506515	0.14542402466341459	133.75285631936725	643143.8166525952	0.04229696543836875	0.052953924486883006	1.7529106000327347e-08	7.7562402327382225	0.24013664268642798	
ILEGPQQSLSGSPLQPIPAS(ph)PPPQIPPGLRPR	ddPTM_K562_Methotrexat_30min_R1	2	ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR	32	1	O15446;O15446-2	O15446	CD3EAP	DNA-directed RNA polymerase I subunit RPA34	1	ILEGPQQSLSGSPLQPIPAS(1)PPPQIPPGLRPR;ILEGPQQSLSGSPLQPIPAS(1)PPPQIPPGLRPR	144.23	9.9734e-35	63167000.0	703.6600000000001	478.5	756.81	708.5799999999999	520.16	655.3900000000001	638.6500000000001	631.89	664.62	706.8399999999999	True	False	672.7279489386941	557.563991890667	597.9659234205834	646.4598915414215	588.5701573276067	782.0348419115285	781.8835197546938	609.6660705413384	633.7219612656158	578.8244265803594	1.1622314436747392	0.9632696311465343	1.0330696079177415	1.1168497075367847	1.0168371103562857	1.3510743603750748	1.3508129302247809	1.0532832453930607	1.0948431547880346	1.0	9.176981995132213	-8.175582548463609	24.999930383993487	1.1846600167682986	1.054997613050241	0.17593214482492137	0.11849178649832914	131.3671772385635	38249.273213869215	0.04057793649794592	0.04057793995652462	6.67448023815754e-09	8.175582548463609	-0.1296624037180576	
ILELT(ph)PEPDRPR	ddPTM_K562_Methotrexat_30min_R1	3	ILELTPEPDRPR	12	1	A0A2R8Y7W5;A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8YF61	A0A2R8Y7W5	CDK13	Cyclin-dependent kinase 13	1	ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR	117.48	0.0069608000000000005	333342000.0	10086.3	8562.1	10915.3	10359.3	7907.8	7919.9	8168.2	8529.6	8563.6	10323.9	True	False	9642.91832899461	9976.841494184082	8624.327696400274	9451.116252850834	8947.814307357829	9450.308586421997	10000.12677688921	8229.6091333767	8165.480105164204	8454.141669363604	1.1406147076927908	1.1801128824630995	1.0201304915025728	1.1179273570846464	1.058394176168494	1.1178318220841195	1.182867187230609	0.9734411197767631	0.9658556036214225	1.0	13.045442573039288	-9.279895038147608	24.76387794573637	0.9772362400182151	1.1133858682314315	0.6368147628747671	0.047375853267781466	495.72409526981363	665160.2255085716	0.026441131866274618	0.012739465713139496	5.249343129328045e-10	9.279895038147608	0.1361496282132164	
ILENSEDS(ph)SPECLF	ddPTM_K562_Methotrexat_30min_R1	2	ILENSEDSSPECLF	14	0	A0A087WSW7;F6XU50;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9	A0A087WSW7	HELLS	Lymphoid-specific helicase	1	ILENS(0.001)EDS(0.789)S(0.21)PECLF;ILENSEDS(0.982)S(0.018)PECLF	159.0	6.6533e-08	6660800.0	4684.5	3882.5	4628.9	4946.9	4108.3	3467.0	3744.0	4432.6	4587.9	4729.4	True	False	4478.574989061919	4524.01713378373	3657.357147661285	4513.212957557734	4648.61345999117	4136.948682322383	4583.687305976004	4276.702945578403	4374.609530394089	3872.859831177001	1.1563999690897244	1.1681334546024187	0.9443556718007472	1.165343739328186	1.2003051136964102	1.0681896228258596	1.1835407181733646	1.1042751692561696	1.129555346975881	1.0	11.919183572104972	-12.155211995908713	4.077024140334629	0.9999569105888451	1.1233658795482195	0.21826458161729134	0.07063286984743394	28642053.52294041	20911000.065801658	12755.63707713413	0.017556248802488184	6.995004594620709e-13	12.155211995908713	0.12340896895937448	
ILEPDDFLDDLDDEDY(ph)EEDTPKRR	ddPTM_K562_Methotrexat_30min_R1	1	ILEPDDFLDDLDDEDYEEDTPKRR	24	2	J3KMZ8;Q92785	J3KMZ8	DPF2	Zinc finger protein ubi-d4	1	ILEPDDFLDDLDDEDY(0.754)EEDT(0.246)PKRR	70.452	0.001645	33809000.0	1278.9	785.74	1720.7	1470.9	675.31	907.26	776.0	1051.3	1333.7	1627.4	True	False	1222.681087311622	915.5701797036004	1359.5485847568048	1341.9484807195754	764.1251017858079	1082.575154751602	950.0377535890428	1014.3251831174869	1271.6965781047097	1332.6620901715758	0.917472700941171	0.6870235046497974	1.0201750277009587	1.0069683009792858	0.5733824856437759	0.8123403244795716	0.7128872056882242	0.7611270633404871	0.9542528353462677	1.0	10.380095301672714	-5.8549533466137005	19.03508273267158	0.8257601602373212	53.81952059124074	0.021921397035411183	0.14749359437062903	1861.7204523728064	244336.4945509456	0.035729456932019905	249.97836757838652	1.3965183717387115e-06	5.8549533466137005	52.993760431003416	
ILEPDDFLDDLDDEDYEEDT(ph)PKRR	ddPTM_K562_Methotrexat_30min_R1	1	ILEPDDFLDDLDDEDYEEDTPKRR	24	2	J3KMZ8;Q92785	J3KMZ8	DPF2	Zinc finger protein ubi-d4	1	ILEPDDFLDDLDDEDY(0.172)EEDT(0.828)PKRR	65.765	0.004943100000000001	49572000.0	4649.9	3294.3	6293.4	5007.7	3359.0	3281.5	3037.0	4461.8	4399.4	5859.3	True	False	4445.49596363305	3838.6270814742443	4972.50134439965	4568.68271595582	3800.767376313883	3915.603432662502	3718.1245588272213	4304.875965027685	4194.872854250474	4798.12399222214	0.9265071037845818	0.8000266536873035	1.036342819080995	0.9521810447920376	0.792136131220245	0.8160696636872614	0.7749121458416621	0.8971998164295003	0.8742735412945666	1.0	12.228254724630375	-5.913230420276669	19.375342199581056	0.8772000065120931	3.29306918556199	0.01962208496121398	0.08592339635679506	1493.5400457626713	338941.9181969716	0.021465958645220922	2571.464121061513	1.2211515912698066e-06	5.913230420276669	2.4158691790498965	
ILEQQNSSRT(ph)LEK	ddPTM_K562_Methotrexat_30min_R1	1	ILEQQNSSRTLEK	13	1	G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181;Q5JXL7	G3V1Q4	SEPT7;DKFZp586I031	Septin-7	1	ILEQQNS(0.004)S(0.011)RT(0.985)LEK	113.47	0.026382	22216000.0	3852.0	3163.0	3253.3	3382.0	3001.7	2626.6	3218.7	2942.9	3161.1	3447.3	True	False	3682.670692254566	3685.6319881926456	2570.4767889750187	3085.5053108937427	3396.4761635848126	3134.1532763161176	3940.575409119915	2839.3965389483997	3014.1411509685813	2822.9605649800146	1.3045420251134956	1.3055910287640657	0.9105606436245831	1.0930033345738879	1.2031610379965965	1.1102362941929038	1.3959016849205659	1.005822247101954	1.0677234348790559	1.0	11.46299326002952	-15.99999998728064	0.026155974607479482	5.865304696179022e-07	1.8650778347151258	0.15090141429134207	0.13745992062259482	4459.2758881263735	8.78178944149771	462.09476350712424	209.81640234682794	1.0000000292874087e-16	15.99999998728064	1.8650772481846563	
ILGSAS(ph)PEEEQEKPILDRPTR	ddPTM_K562_Methotrexat_30min_R1	1	ILGSASPEEEQEKPILDRPTR	21	2	Q7Z422-2;Q7Z422-4;Q7Z422-3;Q7Z422-5;Q7Z422	Q7Z422-2	SZRD1	SUZ domain-containing protein 1	1	ILGS(0.248)AS(0.752)PEEEQEKPILDRPTR	75.956	0.0027291	30989000.0	2718.0	1817.8	3962.0	2795.0	1785.7	1675.2	1749.4	2333.0	2294.9	3139.3	True	False	2598.5199744413057	2118.1605526830817	3130.4303439335517	2549.9666895174473	2020.5508496230152	1998.9086912680862	2141.7474821245787	2250.9470676430105	2188.2105999043997	2570.7423495610337	1.0108052932200753	0.8239489861925554	1.217714542442609	0.9919184199664607	0.7859795245400745	0.7775608829914088	0.833124129491348	0.8756019707799073	0.8511979429902988	1.0	11.327969309210488	-7.686420421775437	6.821653077090515	0.8431105589086355	1.0144736785836732	0.34578307333535074	0.10548328422433394	0.23888114380187433	17.66205994387157	0.031234348861915808	0.04027086536221793	2.0586360714694265e-08	7.686420421775437	0.1713631196750377	
ILIPS(ph)DIESSK	ddPTM_K562_Methotrexat_30min_R1	3	ILIPSDIESSK	11	0	A0A087WYW3;P30414	A0A087WYW3	NKTR	NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase	1	ILIPS(1)DIESSK;ILIPS(1)DIESSK;ILIPS(1)DIESSK	131.06	0.00080066	49498000.0	14317.7	11102.400000000001	21327.3	16088.5	12014.4	10133.7	10713.1	12294.9	12609.7	15252.3	True	False	13688.31105152991	12936.88289146696	16850.9911847991	14678.046184007677	13594.50418755152	12091.894105004425	13115.785383988123	11862.481398184336	12023.477799300414	12489.960672191186	1.095945088282531	1.035782516134806	1.3491628698493598	1.1751875421584193	1.088434507069313	0.968129077614067	1.0501062195648327	0.9497613090644931	0.9626513737605761	1.0	13.608481313811247	-8.039039029132708	3.1100550922902097	0.9871625926045814	1.1670861194133988	0.5303936535169624	0.07896266480236122	0.2197640499742674	4.280988498697482	0.02868684412097685	0.030351939337650336	9.140310957248284e-09	8.039039029132708	0.1799235268088174	
ILLLFGETELS(ph)PTATPR	ddPTM_K562_Methotrexat_30min_R1	2	ILLLFGETELSPTATPR	17	0	Q8NCF5;Q8NCF5-3;Q8NCF5-2;H3BSZ7	Q8NCF5;H3BSZ7	NFATC2IP	NFATC2-interacting protein	1	ILLLFGET(0.076)ELS(0.831)PT(0.091)AT(0.001)PR;ILLLFGET(0.001)ELS(0.843)PT(0.151)AT(0.006)PR	157.07	8.956100000000002e-11	166066000.0	1329.47	1413.21	1332.68	1338.43	1247.63	1204.23	1065.98	1569.8999999999999	1400.31	2145.11	True	False	1271.0280906624296	1646.7189320372202	1052.9686801497644	1221.091919946632	1411.715213370198	1436.930404301438	1305.0531502201654	1514.6857271722088	1335.2098937435742	1756.609792459105	0.7235688290699427	0.9374415075598281	0.5994323182473539	0.6951412460460025	0.8036589682185001	0.8180134315941944	0.742938560300977	0.8622778568550372	0.7601061427958872	1.0	10.778578036050764	-12.090115261927817	0.33517441903912026	1.1220242162879461	0.7515671688071967	0.39346975012187646	0.08696410971251872	16.58813351084405	1.3919206756480704	1.9702379744155591	0.07862771312407911	8.12614819246883e-13	12.090115261927817	-0.3704570474807495	
ILNCFSKDIY(ph)VVDER	ddPTM_K562_Methotrexat_30min_R1	1	ILNCFSKDIYVVDER	15	1	H0Y8Q6	H0Y8Q6	ABCC3		1	ILNCFSKDIY(1)VVDER	65.695	0.029039999999999996	0.0	1715.5	1983.6	1881.2	1642.9	2185.7	2173.7	2061.9	2260.8	2214.5	2128.9	True	False	1640.0886740817011	2311.3561845649488	1486.3618281190818	1498.8695077668021	2473.1578607946576	2593.736761108788	2524.3335620170733	2181.2863825663608	2111.548378355612	1743.3355805372173	0.9407762294258343	1.3258240182608405	0.8525965079316813	0.8597710759192548	1.418635567589656	1.487801195630686	1.4479906164934624	1.2512142853725194	1.211211657657402	1.0	10.767634590084931	-7.768146033209852	24.99999323037085	1.3318783251221684	1.0082374211123644	0.4034538236684647	0.18116565590870126	156.4787502549975	583295.3544784363	0.05705686810003243	0.06615381482809232	1.705508808599324e-08	7.768146033209852	-0.32364090400980405	
ILPPLS(ph)PPQHR	ddPTM_K562_Methotrexat_30min_R1	4	ILPPLSPPQHR	11	0	A0A087WV20;A0A087WTU9;Q8TCU4-3;Q8TCU4-2;Q8TCU4	A0A087WV20	ALMS1	Alstrom syndrome protein 1	1	ILPPLS(1)PPQHR;ILPPLS(1)PPQHR;ILPPLS(1)PPQHR;ILPPLS(1)PPQHR	112.08	0.0015335000000000001	35532800.0	15602.2	14196.800000000001	17339.8	17151.100000000002	14748.5	13618.6	14358.8	15737.5	16382.0	17823.7	True	False	14916.345969546783	16542.579895660234	13700.412942387438	15647.489691800618	16688.186260662493	16250.201708992101	17579.12641267313	15184.003204900091	15620.404395674697	14595.655214815726	1.021971658689603	1.1333907010127389	0.9386637832113527	1.0720649029799771	1.1433667084518881	1.1133588365732894	1.204408171743393	1.040309803254817	1.0702091934741491	1.0	13.833251355990715	-7.520539673695513	24.925387391380283	1.104021213568894	1.0355164861780704	0.14056056287008956	0.06846815338187244	158.52662487999186	1689280.204638103	0.01986775813480323	0.026115950734899977	3.016201324372465e-08	7.520539673695513	-0.0685047273908237	
ILQEKLDQPVSAPPS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	ILQEKLDQPVSAPPSPR	17	1	Q16204	Q16204	CCDC6	Coiled-coil domain-containing protein 6	1	ILQEKLDQPVSAPPS(1)PR;ILQEKLDQPVSAPPS(1)PR	107.06	0.0006806	56761000.0	5675.200000000001	4181.799999999999	8179.3	6813.8	4466.5	4287.4	3572.9	4493.0	4806.6	6839.5	True	False	5425.725003292607	4872.771371553586	6462.576706748029	6216.444733106975	5053.923038495374	5115.879371384191	4374.213775513263	4334.978643343357	4583.142215129411	5600.8002738899395	0.9687410259184734	0.8700134147381917	1.153866660247743	1.1099208022266165	0.9023573045544898	0.9134193545935971	0.7809979934305402	0.7739927209246068	0.81830131249195	1.0	12.451417266954481	-8.160542900076774	2.21624586072236	0.8317359377294696	1.02056159999613	0.3836812441838692	0.09695900599679212	0.3154281806110361	3.042563025194369	0.03809264493123627	0.037535911689353114	6.909666716015298e-09	8.160542900076774	0.1888256622666603	
ILSDVT(ph)HSAVFGVPASK	ddPTM_K562_Methotrexat_30min_R1	2	ILSDVTHSAVFGVPASK	17	0	E9PG46;Q2M2I8-2;Q2M2I8	E9PG46	AAK1	AP2-associated protein kinase 1	1	ILS(0.247)DVT(0.741)HS(0.011)AVFGVPASK;ILS(0.031)DVT(0.959)HS(0.01)AVFGVPASK	98.54299999999999	0.004310199999999999	23671000.0	20227.8	14003.400000000001	28355.0	21343.2	14961.4	14467.900000000001	13757.8	21581.3	21473.1	30824.0	True	False	19338.610132083846	16317.223832898151	22403.672994001994	19472.074793455744	16929.0863423586	17263.61691403866	16843.336863823894	20822.273446602703	20474.820267901516	25241.474909333087	0.7661442210309729	0.6464449439467908	0.8875738471890242	0.7714317354036988	0.6706853067488159	0.6839385169071639	0.6672881408208058	0.8249230095070088	0.8111578400805299	1.0	14.623508591859306	-10.11862890773792	1.347984261016524	0.9974568823798469	0.7311278584147811	0.5638982469015169	0.07064802402552096	0.4469862502532299	1.7205616765598257	0.07000492374598345	0.02107246425037903	7.609762317271123e-11	10.11862890773792	-0.26632902396506575	
ILSQS(ph)TDSLNMR	ddPTM_K562_Methotrexat_30min_R1	3	ILSQSTDSLNMR	12	0	V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF5;V9GYG5;V9GZ14	V9GYM8	ARHGEF2	Rho guanine nucleotide exchange factor 2	1	ILSQS(0.951)T(0.019)DS(0.03)LNMR;ILSQS(0.921)T(0.078)DS(0.001)LNMR;ILS(0.009)QS(0.451)T(0.451)DS(0.088)LNMR	222.81	1.4998e-25	211927000.0	6357.9	5683.4	9446.7	7401.7	6139.450000000001	5331.48	5604.41	5571.21	5368.92	6423.3	True	False	6078.414328734504	6622.485248717697	7463.966766793812	6752.804452880603	6946.895286844387	6361.713054752851	6861.341606432955	5375.267386508111	5119.320081066164	5259.978126950398	1.1555968831107315	1.2590328493546883	1.4190109895231124	1.2838084664803935	1.3207080180145199	1.209456180465376	1.3044429921253278	1.021918201326163	0.9732588154381197	1.0	12.360841084900995	-9.297155587320177	5.267350625817762	0.9929561636895614	1.2829801545114068	0.7914951283243497	0.06599125616301478	0.0897895776234178	6.756272564863505	0.037990501891708155	0.018277981464019395	5.044805334990096e-10	9.297155587320177	0.2900239908218454	
ILTEAEIDAHLVALAERD	ddPTM_K562_Methotrexat_30min_R1	2	ILTEAEIDAHLVALAERD	18	1	G3V5Z7;P60900;H0YJC4;P60900-3;P60900-2	G3V5Z7	PSMA6	Proteasome subunit alpha type;Proteasome subunit alpha type-6	0	;	98.169	0.0016253	9754800.0	2990.5	2237.6000000000004	2297.3	2894.2	1970.0299999999997	2163.1	2360.3	3021.3999999999996	2977.7	3145.5	False	True	2859.0412007235936	2607.3253673031504	1815.128124462026	2640.4699795353818	2229.1234755461865	2581.0884611282227	2889.657357984819	2915.1356494541787	2839.267376938137	2575.819469481805	1.1099540300076878	1.0122314075946028	0.7046798682778758	1.0250990066732368	0.865403613085755	1.002045559368133	1.1218400172144638	1.1317313515145673	1.1022773181807388	1.0	11.330815768017503	-8.584704766217477	4.377547935676578	1.098735017278507	0.9378591959178914	0.28874797676616026	0.10677591774032175	0.25962756295896705	10.081289733300913	0.04257048657977372	0.03283113568546115	2.6019277549346663e-09	8.584704766217477	-0.16087582136061573	
ILTPIKAY(ph)SSPS(ph)T(ph)T(ph)PEAR	ddPTM_K562_Methotrexat_30min_R1	1	ILTPIKAYSSPSTTPEAR	18	1	G3V2R1	G3V2R1	SAMD4A		4	ILT(0.017)PIKAY(0.975)S(0.018)S(0.024)PS(0.989)T(0.989)T(0.989)PEAR	53.395	0.024495	73854000.0	4853.5	4507.9	4868.2	5486.7	4924.3	4330.3	4400.0	5394.2	5135.9	4385.4	True	False	4640.145951416809	5252.753853801331	3846.43134788928	5005.6895296513	5571.931762781323	5167.069189230063	5386.8120048863275	5204.482928538338	4897.133130005231	3591.1615646051523	1.2921016968856405	1.4626893720329932	1.0710827899808497	1.3938914859715243	1.551568110357061	1.4388294974409432	1.5000193970606295	1.4492477809503872	1.3636627152261442	1.0	11.810234845270141	-10.052161632045175	19.845058201698006	0.9999999980166139	1.3971650730104919	0.4635830514950241	0.12670436543692068	941.453456715671	358179.9747159138	0.12863347237827785	0.03321301974604886	8.8682589925382e-11	10.052161632045175	0.397165074993878	
ILY(ph)T(ph)PDTPAT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	ILYTPDTPATR	11	0	O95477	O95477	ABCA1	ATP-binding cassette sub-family A member 1	3	ILY(1)T(0.999)PDT(0.002)PAT(0.999)R	83.226	0.019076	28025000.0	124.09	0.0	61.5	134.74	0.0	56.135	0.0	0.0	0.0	0.0	True	False	118.63515218117061	0.0	48.591990447227026	122.92755339734559	0.0	66.98229428386705	0.0	0.0	0.0	0.0											0.0														
IMEET(ph)SGMEEEEEEESIAAVPGRR	ddPTM_K562_Methotrexat_30min_R1	2	IMEETSGMEEEEEEESIAAVPGRR	24	1	J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9	J3KPG5	BAZ2A	Bromodomain adjacent to zinc finger domain protein 2A	1	IMEET(0.5)S(0.5)GMEEEEEEESIAAVPGRR;IMEET(0.5)S(0.5)GMEEEEEEESIAAVPGRR	79.462	0.00039084	42599000.0	2997.8	2243.48	3314.7999999999997	3498.0	2403.6	2779.0	2812.7	2636.1000000000004	3180.6000000000004	3214.8	True	False	2866.020301464368	2614.1769373602388	2619.068779422246	3191.335770995361	2719.7155301304124	3316.002419432914	3443.5195741235857	2543.3868688442963	3032.7346002248173	2632.568567951077	1.088678310740064	0.9930138075738127	0.9948720087699983	1.2122517186624209	1.0331033969030337	1.259607236750438	1.308045540026967	0.9661236937216071	1.1520059295493255	1.0	11.362255392875928	-7.247351650084999	24.72653619553183	1.1400121854473715	1.0222706104391328	0.1717949774400418	0.1073253592598905	1166.173742883009	2046844.9954248513	0.029327377043411994	0.0504710215316877	5.657809882520717e-08	7.247351650084999	-0.11774157500823867	
IMPSS(ph)LDDRRGS(ph)RPR	ddPTM_K562_Methotrexat_30min_R1	1	IMPSSLDDRRGSRPR	15	3	A0A096LNH6;Q14185	A0A096LNH6	DOCK1	Dedicator of cytokinesis protein 1	2	IMPS(0.453)S(0.547)LDDRRGS(1)RPR	65.085	0.029118	4806500.0	2318.8	1894.5	2358.5	2211.9	1866.5	1726.5	1758.2	2236.3	2200.2	2617.3	True	False	2216.868328452725	2207.5339240059966	1863.4830808095116	2017.986161196294	2111.9774658796873	2060.12169023063	2152.521106134351	2157.6480614530947	2097.9131822343716	2143.2816078444534	1.0343336686784148	1.029978475962458	0.8694532132357813	0.941540371461419	0.9853942935682403	0.9611997241475612	1.0043109119473992	1.006703017259169	0.978832261031853	1.0	11.065605704228165	-8.761819822418328	24.999215231408133	0.9980201355157278	0.9678211618340968	0.08150330659614224	0.044152121645293224	28.84139027430911	1894994.4228985163	0.019134902422057922	0.013813793611286417	1.7305341643060042e-09	8.761819822418328	-0.030198973681630936	
IMPSSLDDRRGS(ph)RPR	ddPTM_K562_Methotrexat_30min_R1	3	IMPSSLDDRRGSRPR	15	3	A0A096LNH6;Q14185	A0A096LNH6	DOCK1	Dedicator of cytokinesis protein 1	1	IMPSSLDDRRGS(1)RPR;IMPSSLDDRRGS(1)RPR;IMPSSLDDRRGS(1)RPR	75.911	0.019169	17881600.0	11228.3	10141.4	10971.2	12002.6	11191.099999999999	10622.8	11918.699999999999	11805.599999999999	11706.099999999999	11079.5	True	False	10734.717376386801	11817.093975674006	8668.495050318983	10950.350693238675	12662.925806807478	12675.505757881221	14591.771873326972	11390.390356522226	11161.885966072978	9072.895187449907	1.183163384410702	1.3024612024637974	0.9554276635213078	1.2069301437964104	1.3956874344061072	1.3970739764981115	1.608281763632744	1.2554306118600376	1.230245223323275	1.0	13.147347277100492	-7.62147162417617	5.473502189597183	1.3450794095903218	1.1501768135600876	0.1589971335872976	0.1665592571172419	0.3191821253566537	14.626765954156435	0.049669283063731355	0.06451682232384819	2.3907181343830097e-08	7.62147162417617	-0.1949025960302342	
IMRLPQPHGT(ph)NASSYSAEMTEPK	ddPTM_K562_Methotrexat_30min_R1	1	IMRLPQPHGTNASSYSAEMTEPK	23	1	P45844-5	P45844-5			1	IMRLPQPHGT(0.867)NAS(0.064)S(0.064)Y(0.001)S(0.002)AEMT(0.002)EPK	48.315	0.018213999999999998	16029000.0	383.24	432.77	468.77	402.23	473.78	371.13	585.58	546.4	609.95	563.28	True	False	366.39322847861916	504.2778866677617	370.3815831210833	366.96712040236247	536.090374382254	442.84561997989783	716.9112213230309	527.1828022975318	581.5935576328764	461.2645337052017	0.7943234341810124	1.093250943481491	0.8029700010662374	0.7955676051107247	1.1622189334089887	0.9600686539297739	1.5542300977798897	1.1429077324953387	1.2608677128525516	1.0	8.849450558669357	-8.141431531678249	1.7467969614959726	1.2341065446982582	0.8895387542502412	0.40122397205765503	0.17697771837502155	0.3451398662828483	2.0927863505290905	0.06888435234191777	0.06856627698853503	7.220519884475048e-09	8.141431531678249	-0.344567790448017	
IMSCS(ph)PDTQCSR	ddPTM_K562_Methotrexat_30min_R1	2	IMSCSPDTQCSR	12	0	Q9C0C9;K7EQ12	Q9C0C9	UBE2O	E2/E3 hybrid ubiquitin-protein ligase UBE2O	1	IMS(0.057)CS(0.928)PDT(0.016)QCSR;IMS(0.188)CS(0.812)PDTQCSR	128.68	0.00017659	103835000.0	3987.2	4137.2	5080.8	4531.5	4226.299999999999	3381.5	3703.8999999999996	4333.1	4479.8	4906.0	True	False	3811.9274621384743	4820.801979623968	4014.409513240179	4134.2304306076285	4782.132528286804	4034.9270173848126	4534.5938602042	4180.702416975538	4271.535075799266	4017.4758598880094	0.9488364323973151	1.1999579207822177	0.9992367479594723	1.029061673247459	1.1903326105909968	1.0043438114142869	1.1287171394056879	1.0406291320172558	1.063238517111672	1.0	11.972073639757356	-10.342350114893192	1.2640455161690787	1.0002855593824476	1.073259257573238	0.06064290242411119	0.07837081408695339	3.477216096390339	8.986347204412226	0.0697764757444664	0.02108714241009732	4.546214105393594e-11	10.342350114893192	0.07297369819079047	
IMSY(ph)ICS(ph)QQDT(ph)LS(ph)NK	ddPTM_K562_Methotrexat_30min_R1	1	IMSYICSQQDTLSNK	15	0	J3KMX3;P02771	J3KMX3	AFP	Alpha-fetoprotein	4	IMS(0.34)Y(0.672)ICS(0.989)QQDT(1)LS(1)NK	48.177	0.031125	8537100.0	4646.8	3203.5	7534.7	4981.8	3346.1	3130.8	2876.3	4051.7	4704.8	6294.1	True	False	4442.532235921214	3732.823924810351	5953.269437767829	4545.0533287434755	3786.170800203597	3735.782790485988	3521.383493103305	3909.199414474578	4486.07487490968	5154.177498924	0.8619284525704923	0.7242327074668315	1.1550377221216477	0.8818193261082515	0.7345829283128119	0.7248067788247261	0.6832095894715381	0.7584526173750658	0.870376481183701	1.0	12.331526506067613	-7.650707191092021	5.988241794336175	0.774557199040382	0.9139524452780448	0.13843692386785733	0.1302848413442668	0.35364416652417663	17.3101183426868	0.03887934568347603	0.050284056633135336	2.235078643917362e-08	7.650707191092021	0.13939524623766275	
IMY(ph)SHLISYFPEY(ph)T(ph)GPKQDVR	ddPTM_K562_Methotrexat_30min_R1	1	IMYSHLISYFPEYTGPKQDVR	21	1	O95837	O95837	GNA14	Guanine nucleotide-binding protein subunit alpha-14	3	IMY(0.719)S(0.21)HLIS(0.069)Y(0.063)FPEY(0.969)T(0.969)GPKQDVR	48.376000000000005	0.02001	50138000.0	0.0	0.0	0.0	65.13	0.0	132.23	66.045	0.0	144.36	0.0	True	False	0.0	0.0	0.0	59.42015402084841	0.0	157.78157607830659	80.85727246879944	0.0	137.64873510924193	0.0											0.0														
INFLCEIEIKK	ddPTM_K562_Methotrexat_30min_R1	1	INFLCEIEIKK	11	1	P42702	P42702	LIFR	Leukemia inhibitory factor receptor	0		61.678999999999995	0.031994	0.0	164.47	0.0	128.78	176.26	190.72	58.614	158.34	264.63	336.85	217.42	False	True	157.24009573081742	0.0	101.7508378828276	160.8075594613042	215.8030229266401	69.94032594913304	193.85177564856846	255.32281290628805	321.18991702374717	178.04313115712426	0.8831573265921276	0.0	0.5714954417030096	0.9031944024809946	1.212082833660078	0.39282799338891783	1.0887910945437875	1.4340503407624523	1.8040006089327585	1.0	7.476082967869936	-8.54943908260558	0.7067775884190808	1.4579462317510077	0.5055066542820702	0.41198931682275886	0.37664066200909163	0.6912782967201793	0.7165657450194735	0.31530226253375937	0.2427608775078033	2.8220253937330673e-09	8.54943908260558	-0.9524395774689375	
INFS(ph)DLDQR	ddPTM_K562_Methotrexat_30min_R1	2	INFSDLDQR	9	0	A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154-4;Q15154-2;Q15154;E5RGQ4;E9PGW9;E7EV93;Q15154-3	A0A5H1ZRS1	PCM1	Pericentriolar material 1 protein	1	INFS(1)DLDQR;INFS(1)DLDQR	110.15	0.0045138	32603000.0	9258.6	8735.1	10518.8	9184.0	8432.7	8423.5	7641.4	9524.900000000001	8619.099999999999	10021.4	True	False	8851.603029934617	10178.426803686873	8311.047627907185	8378.85297907987	9541.747857767814	10051.222159083525	9355.178466849628	9189.903868235288	8218.399922278099	8206.427350648535	1.078618338007354	1.2402993859297975	1.0127485777657412	1.0210110467154392	1.162716423367076	1.2247987741327169	1.1399818784858078	1.119842225558608	1.0014589261706701	1.0	13.00253856935902	-9.755195387367463	5.805372246681415	0.9985119759602229	1.1271168809989267	0.328701995767796	0.07105212755593511	0.18535964360571913	21.67605701516931	0.060953810345920276	0.01915269595397868	1.757132908967572e-10	9.755195387367463	0.1286049050387038	
INHTVILDDPFDDPPDLLIPDRS(ph)PEPTR	ddPTM_K562_Methotrexat_30min_R1	7	INHTVILDDPFDDPPDLLIPDRSPEPTR	28	1	Q8WUA2	Q8WUA2	PPIL4	Peptidyl-prolyl cis-trans isomerase-like 4	1	INHTVILDDPFDDPPDLLIPDRS(0.5)PEPT(0.5)R;INHTVILDDPFDDPPDLLIPDRS(0.893)PEPT(0.107)R;INHTVILDDPFDDPPDLLIPDRS(0.716)PEPT(0.284)R;INHTVILDDPFDDPPDLLIPDRS(0.826)PEPT(0.174)R;INHTVILDDPFDDPPDLLIPDRS(0.863)PEPT(0.137)R;INHTVILDDPFDDPPDLLIPDRS(0.917)PEPT(0.083)R;INHTVILDDPFDDPPDLLIPDRS(0.682)PEPT(0.318)R	108.68	1.1586999999999999e-11	920624900.0	5419.599999999999	5059.34	6231.36	5474.05	4381.74	4352.96	4476.59	5866.110000000001	5646.910000000001	6689.049999999999	True	False	5181.360873245811	5895.309940923988	4923.482692572885	4994.148535510908	4958.015612828102	5194.107913528134	5480.579262035017	5659.795586357201	5384.386386642621	5477.5982267802465	0.9459183858929052	1.076258187776812	0.898839690085654	0.911740571094512	0.905144080956526	0.9482455080648095	1.0005442230575063	1.033262271534663	0.9829830819496932	1.0	12.41932773517254	-8.785044906234871	5.358279887576694	1.0077506552590179	0.9475785221344261	0.24672332196540658	0.0483320332398502	0.28141342192079005	22.196950268023574	0.021669228303872516	0.015024754569651055	1.6404201442864657e-09	8.785044906234871	-0.0601721331245918	
INHTVILDDPFDDPPDLLIPDRS(ph)PEPTREQLDSGR	ddPTM_K562_Methotrexat_30min_R1	5	INHTVILDDPFDDPPDLLIPDRSPEPTREQLDSGR	35	2	Q8WUA2	Q8WUA2	PPIL4	Peptidyl-prolyl cis-trans isomerase-like 4	1	INHTVILDDPFDDPPDLLIPDRS(0.954)PEPT(0.019)REQLDS(0.027)GR;INHTVILDDPFDDPPDLLIPDRS(0.838)PEPT(0.151)REQLDS(0.011)GR;INHTVILDDPFDDPPDLLIPDRS(0.958)PEPT(0.029)REQLDS(0.013)GR;INHTVILDDPFDDPPDLLIPDRS(0.914)PEPT(0.08)REQLDS(0.006)GR;INHTVILDDPFDDPPDLLIPDRS(0.933)PEPT(0.049)REQLDS(0.018)GR	114.71	6.4091e-24	3058879000.0	5429.2	4022.84	5595.42	5896.42	4244.9400000000005	4443.93	4746.68	5593.62	5852.52	6911.0	True	False	5190.538868740525	4687.545933411604	4421.017807938584	5379.490013382633	4803.224015007404	5302.656578550015	5811.243819853144	5396.889214106004	5580.43762262081	5659.350931040777	0.9171615141006928	0.8282833120846149	0.7811881365564198	0.9505489373130858	0.8487234796948829	0.9369725686148315	1.026839277271048	0.9536233536084137	0.9860561203251881	1.0	12.466420885022284	-8.451948560163785	3.6412167402120974	0.9878355570700366	0.8634636781423568	0.6197371917393435	0.04664311620060352	0.16673218507917958	4.283047072533222	0.017910561772098536	0.015089003544578858	3.5322500490877167e-09	8.451948560163785	-0.12437187892767976	
INISEGNCPER	ddPTM_K562_Methotrexat_30min_R1	2	INISEGNCPER	11	0	Q15366;Q15366-6;Q15366-3;Q15366-2;Q15366-7;Q15366-8;Q15366-4;H3BRU6;Q15366-5;F8VZX2;F8VXH9;F8W1G6;J3QT27;F8W0G4;P57721-4;E9PFP8;P57721-5;P57721-3;P57721-2;P57721;Q15365;F8VTZ0	Q15366;Q15365;F8VTZ0	PCBP2;PCBP3;PCBP1	Poly(rC)-binding protein 2;Poly(rC)-binding protein 3;Poly(rC)-binding protein 1	0	;	110.84	0.00028946	0.0	564.0699999999999	594.4	940.55	714.24	707.87	546.06	516.41	594.0899999999999	813.5	987.04	False	True	539.2741581983473	692.6144969275078	743.1414083762498	651.6236881291387	800.9673124951802	651.5783667346299	632.2280880553066	573.1955179665824	775.6805625614314	808.2774913868453	0.6671893798168979	0.8569018738095966	0.9194137116216923	0.8061880914326595	0.9909558549266017	0.8061320198545298	0.7821918769141121	0.7091568478333988	0.959671116451005	1.0	9.658706862355555	-9.937013574355788	8.3376287889767	0.999861513096293	0.8260352204617178	0.351105296526913	0.08859477658683104	0.2636021731658345	29.778187632648297	0.0869299885509588	0.022477221960709403	1.1560761071862342e-10	9.937013574355788	-0.17382629263457516	
INLY(ph)DS(ph)FEAS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	INLYDSFEASK	11	0	G3XAD3;A0A0A0MRL4;A0A0A0MR30;F8WEZ8;Q13002-3;Q13002-6;Q13002-7;Q13002-4;Q13002-2;Q13002-5;Q13002	G3XAD3	GRIK2	Glutamate receptor ionotropic, kainate 2	3	INLY(1)DS(1)FEAS(1)K	74.376	0.032444	0.0	2350.6	2329.4	3925.2	3024.4	2011.5	2143.0	2403.2	1672.0	2015.8	1742.7	True	False	2247.270438528968	2714.2937569699484	3101.354161031798	2759.2555476839257	2276.0475074294077	2557.10442059904	2942.1787750324584	1613.1948123013792	1922.0858979856587	1427.080142891733	1.5747331708892398	1.9019911183613682	2.173216533408864	1.933497261122818	1.5948981693609638	1.791843599909888	2.0616773274349107	1.13041641027428	1.3468661221022118	1.0	10.478850641554127	-9.269068250665962	24.966225229507828	1.1789808799871342	1.8650391646416993	0.7394214374598348	0.1910186728060785	316.2059789802777	1034807.7801579711	0.1059352016433393	0.05243832334247893	5.381851984699324e-10	9.269068250665962	0.6860582846545651	
INNYLTVPAHKLDS(ph)PTMSR	ddPTM_K562_Methotrexat_30min_R1	1	INNYLTVPAHKLDSPTMSR	19	1	P19634	P19634	SLC9A1	Sodium/hydrogen exchanger 1	1	INNYLTVPAHKLDS(0.735)PT(0.221)MS(0.043)R	65.207	0.028114999999999998	10735000.0	3189.1	2359.0	3659.6	2887.2	1908.5	1802.5	1993.9	2829.4	2617.9	3628.2	True	False	3048.9109825205182	2748.7846538559743	2891.4999713930406	2634.083658667182	2159.5012020527097	2150.8076146195826	2441.0828310324646	2729.8883982808143	2496.1944004051293	2971.0978220231714	1.0261900365314662	0.9251747396133148	0.9732092797348798	0.886569145970933	0.7268361162818247	0.7239100640432594	0.8216097137354459	0.9188147148995232	0.8401589412176754	1.0	11.5367803906851	-7.433794352715197	4.088934210257397	0.8263801370965937	0.968566981287026	0.35449093786138386	0.08062011722882653	0.25164008330009807	7.572251712655633	0.024163036627619948	0.03621899591566418	3.683033314889607e-08	7.433794352715197	0.14218684419043226	
INPPSSGGTSS(ph)SPIK	ddPTM_K562_Methotrexat_30min_R1	2	INPPSSGGTSSSPIK	15	0	A0A0C4DG88;A0A0A0MT46;P14859-4;P14859-5;P14859-3;P14859;P14859-2;P14859-6	A0A0C4DG88	POU2F1	POU domain protein;POU domain, class 2, transcription factor 1	1	INPPS(0.023)S(0.008)GGT(0.08)S(0.05)S(0.521)S(0.317)PIK;INPPS(0.006)S(0.006)GGT(0.056)S(0.175)S(0.6)S(0.157)PIK	113.59	0.0012439	6268900.0	2681.9	2413.7	4456.0	2754.4	2564.7	2162.49	2017.55	2950.3	2476.6000000000004	2843.2	True	False	2564.006887216389	2812.5228991149493	3520.746494842985	2512.92602848188	2902.003003879791	2580.3605872614153	2470.036945558731	2846.536276754042	2361.463406563787	2328.2689288286992	1.1012503132558162	1.2079888471173592	1.5121734655515913	1.0793108980525192	1.2464208785965822	1.108274287094291	1.0608898804492282	1.2225977169166928	1.014257149302674	1.0	11.185041992341072	-8.149284095542534	1.3373289402788653	1.0865264977571412	1.251280530655996	0.25835804642828775	0.12384277800629484	0.6480009076805626	2.362539427997827	0.05644949513647719	0.05599335882975386	7.091137465010956e-09	8.149284095542534	0.16475403289885482	
INPPSSGGTSSS(ph)PIK	ddPTM_K562_Methotrexat_30min_R1	2	INPPSSGGTSSSPIK	15	0	A0A0C4DG88;A0A0A0MT46;P14859-4;P14859-5;P14859-3;P14859;P14859-2;P14859-6	A0A0C4DG88	POU2F1	POU domain protein;POU domain, class 2, transcription factor 1	1	INPPSSGGT(0.001)S(0.015)S(0.26)S(0.724)PIK;INPPSSGGTS(0.002)S(0.008)S(0.99)PIK	154.81	1.0548e-08	44174000.0	3554.2	2639.7	5258.7	4039.1000000000004	3126.1	3029.3	2287.51	2695.7	3148.8	3935.2	True	False	3397.9616236789166	3075.865557771775	4154.970734387524	3684.998374107309	3537.2369440591956	3614.6693519928485	2800.542347567619	2600.890703062694	3002.4129752838808	3222.4971471323506	1.0544498469774315	0.9544975270215333	1.289363665716498	1.1435226179754823	1.097669534698247	1.121698231822947	0.8690596825073305	0.8071041134597079	0.9317038427654407	1.0	11.653963366035722	-8.760311203817224	24.99894880585621	0.8858922212370886	1.1122117322016227	0.5553219251062729	0.09082128443827812	22.01895859416217	487930.4846872636	0.03725681857629825	0.027207478328388438	1.7365560131802214e-09	8.760311203817224	0.22631951096453418	
INPYMS(ph)SPCHIEMILTEK	ddPTM_K562_Methotrexat_30min_R1	2	INPYMSSPCHIEMILTEK	18	0	A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A0A0MRF8;A0A0A6YYL6;P18621-2;P18621;P18621-3	A0A087WXM6	RPL17;RPL17-C18orf32	60S ribosomal protein L17	1	INPY(0.271)MS(0.631)S(0.098)PCHIEMILTEK;INPY(0.002)MS(0.828)S(0.17)PCHIEMILTEK	79.635	0.0045169	30772000.0	6410.3	4894.1	7968.2	6117.3	4281.299999999999	4669.6	3724.3999999999996	5837.200000000001	6437.1	6927.0	True	False	6128.510887476491	5702.7668395237515	6295.783711895845	5581.005806720957	4844.365992322902	5571.934112192849	4559.691507045142	5631.902367443544	6137.840626016216	5672.453175997608	1.0803986736124405	1.0053440130020663	1.10988729506588	0.9838786912047857	0.8540160389196916	0.9822794370114689	0.8038306118310504	0.9928512748724572	1.0820434185314824	1.0	12.469757079695027	-7.511984418391243	23.984116736544046	0.9437235640609372	1.0571666875365366	0.292930489291527	0.07734452926556906	382.6710667861664	842459.9436695722	0.022591743685210965	0.03128145078899694	3.0762071808606974e-08	7.511984418391243	0.11344312347559948	
INQMVCNS(ph)DR	ddPTM_K562_Methotrexat_30min_R1	2	INQMVCNSDR	10	0	A0A3B3IS71;P06400	A0A3B3IS71	RB1	Retinoblastoma-associated protein	1	INQMVCNS(1)DR;INQMVCNS(1)DR	99.73200000000001	0.0057852	23052000.0	6302.6	4663.7	6089.5	5636.2	5283.7	5371.200000000001	4943.299999999999	5848.6	6443.6	7361.0	True	False	6025.545250520155	5434.297155654133	4811.397167941284	5142.083096765022	5978.599162319047	6409.108382604553	6051.96085994422	5642.90142298196	6144.03844243496	6027.8515704516185	0.9996173893957891	0.9015313486305677	0.798194366882993	0.8530540337076957	0.991829193609543	1.0632492037497816	1.0039996488318963	0.9361380845280474	1.0192750054684305	1.0	12.557428177176819	-7.804154561737265	7.851466790170927	1.0027429810140245	0.8827046962820263	0.505984684970809	0.055249337935770124	0.2006864601470679	31.63416297966464	0.018419087620002488	0.02107806843729895	1.5698040249159766e-08	7.804154561737265	-0.12003828473199818	
INS(ph)SPNVNTTASGVEDLNIIQVTIPDDDNER	ddPTM_K562_Methotrexat_30min_R1	1	INSSPNVNTTASGVEDLNIIQVTIPDDDNER	31	0	A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347	A0A494C1K3	GTF2I	General transcription factor II-I	1	INS(0.478)S(0.391)PNVNT(0.043)T(0.043)AS(0.043)GVEDLNIIQVT(0.001)IPDDDNER	42.909	0.026626	4641800.0	160.03	0.0	226.37	72.182	0.0	117.39	183.64	113.89	0.0	0.0	True	False	152.99527281451154	0.0	178.85803052908585	65.85391612978476	0.0	140.07395610551623	224.82594467666485	109.88442414653346	0.0	0.0											0.0														
IPCDS(ph)PQSDPVDTPTSTK	ddPTM_K562_Methotrexat_30min_R1	1	IPCDSPQSDPVDTPTSTK	18	0	P46013;P46013-2	P46013	MKI67	Antigen KI-67	1	IPCDS(0.833)PQS(0.167)DPVDTPTSTK	83.25299999999999	0.007276100000000001	21575000.0	1732.5	1075.6	2211.6	1591.5	1223.8	1045.7	891.06	1467.8	1374.3	1930.6	True	False	1656.3413744369254	1253.3246179260225	1747.4153833022317	1451.9756659631555	1384.7511506796463	1247.7667254411638	1090.9028875168208	1416.1766420430408	1310.4090929664114	1580.949632103504	1.0476876307774021	0.7927669499871631	1.1052947847410166	0.9184199398125388	0.8758983351273442	0.7892514094715151	0.6900301346509943	0.8957759395274172	0.8288746626436607	1.0	10.626575689883976	-7.787984382769817	2.848187120730162	0.8263048000412725	0.9677569674209593	0.23769766995024155	0.10603478589232851	0.35565263862331153	5.912649242108678	0.03343680032409223	0.04120152962473616	1.6293546231808087e-08	7.787984382769817	0.1414521673796868	
IPCKSS(ph)PELEDTATSSK	ddPTM_K562_Methotrexat_30min_R1	2	IPCKSSPELEDTATSSK	17	1	P46013;P46013-2	P46013	MKI67	Antigen KI-67	1	IPCKS(0.204)S(0.794)PELEDT(0.002)ATSSK;IPCKS(0.214)S(0.785)PELEDT(0.001)ATSSK	80.142	0.011048	69549000.0	7418.6	4720.5	13211.0	8242.0	5476.6	4344.4	4004.9	6322.299999999999	5978.8	10318.5	True	False	7092.487226780827	5500.482390219216	10438.19163899701	7519.436656530524	6196.868893456575	5183.893814675905	4903.100772356651	6099.9411254862425	5700.846892983755	8449.719661690671	0.8393754480325231	0.650966258106443	1.2353299348286868	0.8899036840976081	0.7333815962619366	0.6134989114702392	0.5802678631560196	0.7219104739228389	0.674678820272612	1.0	13.04468776222286	-7.793993125492355	4.428612696101072	0.6912821654512423	0.9110876336349325	0.20794695560267096	0.17125790541886582	0.2867923073825385	12.665786338488923	0.05377127738611849	0.06404588900702177	1.6069666897103762e-08	7.793993125492355	0.21980546818369018	
IPDPDS(ph)DDVSEVDAR	ddPTM_K562_Methotrexat_30min_R1	2	IPDPDSDDVSEVDAR	15	0	P51532;A0A2R8Y4C5;Q9HBD4;A0A2R8Y4P4;A0A2R8Y7S2;A0A2R8YGG3;A0A2R8YG32;A0A2R8Y440;A0A2R8Y6N0;A0A2R8Y7F3;A0A2R8Y7Y7;A0A2R8Y526;A0A2R8YF80;A0A2R8YF58;A0A2R8Y6V2;A0A2R8YDA1;A0A0A0MT49;P51532-5;P51532-2;P51532-3;P51532-4;A0A2R8Y7R0;A0A2R8YGP5;A0A2R8Y583	P51532	SMARCA4	Transcription activator BRG1	1	IPDPDS(1)DDVSEVDAR;IPDPDS(1)DDVSEVDAR	237.59	1.8475999999999998e-48	12145100.0	868.72	898.71	1171.88	838.58	875.51	788.48	895.79	1145.85	919.97	956.6	True	False	830.532108975957	1047.206552041926	925.9184026877462	765.0629933794424	990.6549108772163	940.8426008184463	1096.6937104220733	1105.5498060260368	877.2007955004801	783.3504703564759	1.0602305614216463	1.336830182236794	1.1819976341705554	0.9766547954343968	1.264638177119372	1.2010493852008555	1.4000038959866912	1.4113093026202423	1.1198063047071334	1.0	9.613514102298698														
IPEINSSDMS(ph)AHVT(ph)SPSGR	ddPTM_K562_Methotrexat_30min_R1	1	IPEINSSDMSAHVTSPSGR	19	0	E7EN95;O75369-7;O75369-2;O75369-9;O75369;O75369-8	E7EN95	FLNB	Filamin-B	2	IPEINS(0.008)S(0.01)DMS(0.982)AHVT(0.885)S(0.081)PS(0.034)GR	75.23899999999999	0.007399200000000001	0.0	267.45	343.81	576.69	293.85	292.74	270.23	299.38	340.95	348.41	466.86	True	False	255.69321823558772	400.618758729217	455.6506499351439	268.08862673155693	331.2404411259682	322.4481229950901	366.52358591428833	328.9585952477002	332.2124951469312	382.30713003410483	0.6688162426182788	1.047897690774113	1.1918444991975332	0.7012388879789956	0.8664249633440498	0.8434269142883241	0.9587150150236317	0.8604563436165956	0.8689675631142302	1.0	8.578588296483835	-7.277755171866142	24.977512504903153	0.8677796979672479	0.9773573457045387	0.09069305504143188	0.14153287321675656	1789.0299929012801	2738784.505869957	0.039842435981673904	0.05928996716806003	5.275271645181377e-08	7.277755171866142	0.10957764773729084	
IPGSPAVT(ph)AAS(ph)S(ph)NT(ph)DMT(ph)YGGLASPK	ddPTM_K562_Methotrexat_30min_R1	1	IPGSPAVTAASSNTDMTYGGLASPK	25	0	A0A499FJI4;O75592-2;O75592	A0A499FJI4	MYCBP2	E3 ubiquitin-protein ligase MYCBP2	5	IPGS(0.105)PAVT(0.944)AAS(0.981)S(0.982)NT(0.982)DMT(0.526)Y(0.467)GGLAS(0.012)PK	49.66	0.012834	29446000.0	1494.7	1578.1	1784.0	1746.8	1610.8	1589.6	1715.6	1951.8	1752.2	1854.5	True	False	1428.9947777032448	1838.8542018864398	1409.562779802488	1593.6607560819589	1822.6484339882127	1896.7677027457926	2100.366971723406	1883.154087709229	1670.7406044500815	1518.6320795275828	0.940974971467597	1.2108622138803178	0.9281792468396795	1.0494054337227725	1.2001909208682089	1.2489975210689876	1.3830650623268737	1.2400331279022119	1.1001615381191057	1.0	10.568556673702766	-7.773342479739184	4.683668300335458	1.2211880172210452	1.0359999016980104	0.29790330903105855	0.11924364603439538	0.2196251240339822	12.08720425129051	0.0364820319210196	0.044075403575440535	1.6852235529323723e-08	7.773342479739184	-0.18518811552303482	
IPGSPAVT(ph)AAS(ph)S(ph)NT(ph)DMTY(ph)GGLASPK	ddPTM_K562_Methotrexat_30min_R1	1	IPGSPAVTAASSNTDMTYGGLASPK	25	0	A0A499FJI4;O75592-2;O75592	A0A499FJI4	MYCBP2	E3 ubiquitin-protein ligase MYCBP2	5	IPGS(0.266)PAVT(0.935)AAS(0.811)S(0.994)NT(0.993)DMT(0.438)Y(0.55)GGLAS(0.013)PK	50.218999999999994	0.011705	24180000.0	687.76	529.4	863.85	819.76	899.43	804.35	646.93	711.52	728.79	938.89	True	False	657.5268939005718	616.874351738598	682.5396902087331	747.892913559507	1017.720810145281	959.7792537138765	792.0205205275255	686.4954383066248	694.9087119719065	768.8479229698852	0.8552106005056169	0.8023359799890624	0.8877434272986484	0.9727449229108485	1.3236958568009864	1.2483343259957924	1.0301393771971572	0.8928884605096526	0.9038311624588017	1.0	9.586554453144752	-7.340363551112261	3.3863373629430478	1.0726101033951545	0.8397004924987848	0.3549932635056514	0.1296908078173939	0.2983682412201899	6.615899735482161	0.04330713700764347	0.06926525717218628	4.567057178291724e-08	7.340363551112261	-0.23290961089636975	
IPGTPGAGGRLS(ph)PENNQVLTKK	ddPTM_K562_Methotrexat_30min_R1	1	IPGTPGAGGRLSPENNQVLTKK	22	2	Q16514-2;Q16514	Q16514-2	TAF12	Transcription initiation factor TFIID subunit 12	1	IPGT(0.002)PGAGGRLS(0.998)PENNQVLTKK	63.998000000000005	0.006608	12284000.0	1940.3	1616.8	3072.5	3075.3	1890.6	1522.1	1371.3	1955.1	1991.2	2900.1	True	False	1855.0067352496205	1883.9487190989157	2427.624238196829	2805.693223711272	2139.247038302778	1816.2242830582345	1678.8489323410495	1886.3380248387696	1898.6295466162542	2374.8637874564242	0.7811002656436175	0.7932870630516041	1.0222162007855253	1.1814122723713276	0.900787257611098	0.7647698754982005	0.7069243049678925	0.7942931442224375	0.7994688186516009	1.0	11.213629053349203	-8.11629123170467	5.298365669231448	0.794825614900694	0.9503871638043342	0.18429290578356894	0.12771424898319036	0.3619627645273563	14.3735604904724	0.04577803225907566	0.04602213855561724	7.650833808123772e-09	8.11629123170467	0.15556154890364016	
IPMTPTSSFVSPPPPTAS(ph)PHSNR	ddPTM_K562_Methotrexat_30min_R1	1	IPMTPTSSFVSPPPPTASPHSNR	23	0	Q7Z5L9;Q7Z5L9-2	Q7Z5L9	IRF2BP2	Interferon regulatory factor 2-binding protein 2	1	IPMTPTSSFVSPPPPT(0.25)AS(0.713)PHS(0.037)NR	90.397	0.0020969	14465000.0	415.87	299.77	520.69	542.78	470.67	576.55	503.01	635.76	624.82	571.23	True	False	397.5888527486778	349.30189728122303	411.4042846498639	495.1953201203148	532.571354870395	687.9601277164606	615.8227969495163	613.3999604478018	595.7722545785297	467.7747116681265	0.8499579879614279	0.7467310407516071	0.879492359009232	1.058619262153792	1.1385210478163685	1.4707082502667432	1.31649441833535	1.3113149239307158	1.273630745137873	1.0	8.869670060150122	-7.533890285315729	1.599097715332787	1.293310121106676	0.8000653687435897	0.7302881259056144	0.11705617963455053	0.17862519537650431	0.9245369557560091	0.03889292108598035	0.06471664833837688	2.9248911921639167e-08	7.533890285315729	-0.4932447523630863	
IPQNPS(ph)PHTHQQQNAPVTVIQSK	ddPTM_K562_Methotrexat_30min_R1	1	IPQNPSPHTHQQQNAPVTVIQSK	23	0	F8W108;F8WCU9;Q68CP9-3;Q68CP9	F8W108	ARID2	AT-rich interactive domain-containing protein 2	1	IPQNPS(0.643)PHT(0.357)HQQQNAPVTVIQSK	76.804	0.001265	12609000.0	1081.0	777.51	1645.9	1319.1	957.79	871.98	934.07	956.33	1212.8	1388.1	True	False	1033.4805343528521	905.9803120896817	1300.4480825543253	1203.4565510348714	1083.7561730752232	1040.4777940615722	1143.5589748645841	922.6953318469962	1156.4171927160467	1136.7016390359856	0.9091924378936647	0.7970256054684902	1.1440540225289109	1.05872685470525	0.9534218442707054	0.9153481954543332	1.0060326611602444	0.8117304490116826	1.017344528241185	1.0	10.150637910598844	-11.520032768758094	16.749757383329687	0.9999999986560836	0.9566167479059711	0.016033780394167918	0.10105084857558215	0.0	0.0	0.10035155145479127	0.024338826255453538	3.019723865022339e-12	11.520032768758094	-0.04338325075011251	
IPSIVS(ph)SPLNSPLDR	ddPTM_K562_Methotrexat_30min_R1	2	IPSIVSSPLNSPLDR	15	0	P49790-2;P49790;P49790-3	P49790-2	NUP153	Nuclear pore complex protein Nup153	1	IPSIVS(0.831)S(0.169)PLNSPLDR;IPSIVS(0.893)S(0.107)PLNSPLDR	184.48	7.5539e-06	79334000.0	1706.51	1796.38	2146.75	2485.83	1866.3799999999999	1504.13	1695.63	1983.68	2118.12	2007.5800000000002	True	False	1631.4938637173775	2093.2012617608298	1696.1765120745467	2267.9011434000554	2111.8416837763352	1794.781834883636	2075.918190873957	1913.9128500394722	2019.6490635188923	1643.9878081520528	0.9924002207481579	1.2732462195773346	1.031745189145385	1.3795121424588428	1.284584759877374	1.0917245407683924	1.2627333247729018	1.164189199304849	1.2285061078336748	1.0	10.682983884664777	-13.38166188304381	1.862991844304383	2.3324903027341972e-05	1.194519472734254	0.194914217689522	0.115401293460698	3039674.434563352	284346.8532080829	12790107.12285203	0.03193442162360051	4.152772280162689e-14	13.38166188304381	1.1944961478312268	
IPVLT(ph)S(ph)RRT(ph)SLSNS(ph)S(ph)FAK	ddPTM_K562_Methotrexat_30min_R1	1	IPVLTSRRTSLSNSSFAK	18	2	A0A2R8Y6Y0	A0A2R8Y6Y0			5	IPVLT(0.678)S(0.678)RRT(0.601)S(0.571)LS(0.498)NS(0.975)S(0.998)FAK	45.14	0.033249	0.0	139.19	127.93	177.49	0.0	139.54	241.09	0.0	0.0	155.59	125.16	True	False	133.07137426140014	149.06825806180368	140.237274544363	0.0	157.8919558472282	287.67723040701	0.0	0.0	148.35665486039724	102.49231117480304	1.298354703256167	1.4544335702174211	1.3682711701679267	0.0	1.5405248846222208	2.80681767353621	0.0	0.0	1.447490579145703	1.0	6.679371874665953														
IPYQS(ph)PVSSSESAPGTIMNGHGGGR	ddPTM_K562_Methotrexat_30min_R1	2	IPYQSPVSSSESAPGTIMNGHGGGR	25	0	H0YDN2;Q5T6F2	H0YDN2	UBAP2	Ubiquitin-associated protein 2	1	IPY(0.001)QS(0.544)PVS(0.261)S(0.111)S(0.066)ES(0.017)APGTIMNGHGGGR;IPY(0.003)QS(0.618)PVS(0.176)S(0.176)S(0.026)ES(0.001)APGTIMNGHGGGR	80.751	0.0075896	65036000.0	4277.7	4063.1000000000004	4670.4	4502.1	3809.4	3599.1000000000004	3795.3	4596.1	4613.1	4719.9	True	False	4089.657429973357	4734.458214108611	3690.1468647923416	4107.407882961179	4310.402870893157	4294.575137740551	4646.492636851153	4434.45255790572	4398.637987894454	3865.080373233881	1.0581041104073017	1.2249313744923056	0.9547400075680254	1.0626966288736046	1.1152168789925263	1.1111218197378172	1.202172319372358	1.1473118615112912	1.1380456712764682	1.0	11.916282699552266	-8.000313607285017	3.1148751290613297	1.1334632628246606	1.0777803258053298	0.05525091165048679	0.07794960966749985	0.6505265288887223	13.009507768034949	0.02626256239736271	0.02849396073409976	9.992781531973122e-09	8.000313607285017	-0.0556829370193308	
IQAAAST(ph)PTNATAASDANTGDR	ddPTM_K562_Methotrexat_30min_R1	1	IQAAASTPTNATAASDANTGDR	22	0	P49841;P49841-2	P49841	GSK3B	Glycogen synthase kinase-3 beta	1	IQAAAS(0.016)T(0.803)PT(0.095)NAT(0.082)AAS(0.004)DANTGDR	108.69	6.2525e-06	0.0	392.38	339.42	467.2	473.24	335.65	361.87	463.33	404.33	492.87	479.13	True	False	375.13144502254585	395.5033858464582	369.14110466576346	431.75178395250003	379.7938582494063	431.7962560346126	567.2435468690871	390.10948472357416	469.95658127799965	392.35491413537363	0.9561023234517583	1.0080245502162826	0.9408346661828715	1.1004113072062438	0.9679854758193919	1.1005246537720963	1.4457409004781114	0.9942770452697204	1.197784363969636	1.0	8.616015459440014	-8.518060813132626	24.98311555357235	1.1752820886560058	1.001892764676636	0.2806671194821778	0.12403992090234202	259.5733536796836	1346016.8065055641	0.04497354009891643	0.03580778924574756	3.0334663860038955e-09	8.518060813132626	-0.1733893239793698	
IQALGLHLPDPPLES(ph)EDEDEEGATALNNHSSIPMDPEHVELVKR	ddPTM_K562_Methotrexat_30min_R1	1	IQALGLHLPDPPLESEDEDEEGATALNNHSSIPMDPEHVELVKR	44	1	A0A2R8Y7W8;A0A2R8Y6W5;Q16626	A0A2R8Y7W8	MEA1	Male-enhanced antigen 1	1	IQALGLHLPDPPLES(0.307)EDEDEEGAT(0.307)ALNNHS(0.307)S(0.079)IPMDPEHVELVKR	56.41	6.2967e-05	28112000.0	2030.8	1321.7	1804.3	2247.3	1322.5	1111.5	1266.2	1925.1	2124.1	2922.7	True	False	1941.528463611261	1540.0884599412643	1425.6020872184013	2050.2826981583407	1496.4319306862494	1326.2816441884424	1550.1775819516072	1857.3931418429318	2025.3510546241391	2393.3707084579473	0.8112109238865847	0.6434809511534241	0.5956461663796826	0.8566507022555404	0.6252403463441746	0.5541480220767672	0.6476963959128543	0.7760574386905793	0.846233743676539	1.0	11.224828157440196	-9.872681057506611	1.6471099611245923	0.9936036235502544	0.6735865844208756	0.5686963783653494	0.089339994494742	0.2570487613180342	1.5020271580625224	0.08682800906738006	0.025557372418823575	1.3406608969306364e-10	9.872681057506611	-0.32001703912937884	
IQALGLHLPDPPLESEDEDEEGAT(ph)ALNNHSSIPMDPEHVELVK	ddPTM_K562_Methotrexat_30min_R1	1	IQALGLHLPDPPLESEDEDEEGATALNNHSSIPMDPEHVELVK	43	0	A0A2R8Y7W8;A0A2R8Y6W5;Q16626	A0A2R8Y7W8	MEA1	Male-enhanced antigen 1	1	IQALGLHLPDPPLES(0.153)EDEDEEGAT(0.448)ALNNHS(0.2)S(0.2)IPMDPEHVELVK	63.303999999999995	1.6354e-05	7161900.0	1814.1	980.75	1923.1	1674.4	1116.7	964.32	819.88	1774.2	1916.0	2385.5	True	False	1734.3543361420063	1142.8022676003598	1519.4675907164592	1527.6079516737082	1263.565623438439	1150.6611921941512	1003.7589605832281	1711.8003803738661	1826.9255782024618	1953.462834032378	0.8878358502280367	0.5850135706146832	0.7778328638994084	0.78200000791435	0.6468337157099431	0.5890366441315563	0.5138357091295401	0.8762902219339043	0.9352241293637947	1.0	10.93181809218406	-9.46013758643324	6.355822109802847	0.9490163019005811	0.681828312978603	0.5558396315960061	0.10584226913919478	0.16998610045839085	13.706538078088126	0.061725800367908645	0.028630169992404572	3.4662702006663103e-10	9.46013758643324	-0.26718798892197804	
IQAQFAQLAQLS(ph)PQER	ddPTM_K562_Methotrexat_30min_R1	2	IQAQFAQLAQLSPQER	16	0	K7EK35;P42229-2;P42229;K7EIF9	K7EK35	STAT5A	Signal transducer and activator of transcription;Signal transducer and activator of transcription 5A	1	IQAQFAQLAQLS(1)PQER;IQAQFAQLAQLS(1)PQER	241.64	2.1598e-64	98306000.0	5292.299999999999	4353.4	4985.299999999999	4366.2	4244.5	4185.4	4424.4	5737.4	5301.0	5197.4	True	False	5059.656828821091	5072.725354852311	3938.9536581554603	3983.4220249628197	4802.726147295111	4994.169314967439	5416.684326004336	5535.612390010724	5054.55766704136	4256.100496164277	1.1888010711638513	1.1918716109791112	0.9254841754101816	0.9359323231565602	1.1284334455033358	1.1734143306691964	1.2726871301290963	1.3006300943785472	1.1876029881335455	1.0	12.055316501198112	-8.18068110237485	3.083442068598396	1.213241246477342	1.058974153767749	0.19649229038817828	0.11279936628513382	0.3706242545788377	6.86771418138817	0.042152238337657744	0.041359821773357265	6.596580970808085e-09	8.18068110237485	-0.15426709270959305	
IQAQFGPLAQLS(ph)PQER	ddPTM_K562_Methotrexat_30min_R1	3	IQAQFGPLAQLSPQER	16	0	P51692	P51692	STAT5B	Signal transducer and activator of transcription 5B	1	IQAQFGPLAQLS(1)PQER;IQAQFGPLAQLS(1)PQER;IQAQFGPLAQLS(1)PQER	198.67	7.755e-12	53876600.0	5596.139999999999	4324.09	6136.82	5247.62	4299.53	4125.2	4515.71	5526.66	5395.91	5683.549999999999	True	False	5350.140386228835	5038.572375537128	4848.7853466073475	4787.569302055654	4864.993556857051	4922.3365169646095	5528.472917860281	5332.284235259292	5145.0553218572295	4654.204020274461	1.1495285472924615	1.0825851968646618	1.0418076486301973	1.0286547992310247	1.0452901367590155	1.0576108171283682	1.1878449878383852	1.1456919834263828	1.1054640706433454	1.0	12.184318738333332														
IQDPTEDAEAEDT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	IQDPTEDAEAEDTPR	15	0	H0Y9L4;O96028-5;O96028-3;O96028	H0Y9L4	WHSC1	Histone-lysine N-methyltransferase NSD2	1	IQDPTEDAEAEDT(1)PR;IQDPTEDAEAEDT(1)PR	124.04	0.0012771	78258000.0	2513.0	2308.5	3375.4	2425.3	2444.3	2551.0	2189.2	2800.2	2817.0	2812.9	True	False	2402.531528981237	2689.940387209205	2666.949667570247	2212.6777145211695	2765.7682935171265	3043.944646266053	2680.18382752208	2701.7153788315295	2686.0382848623876	2303.456552441702	1.0430114370659667	1.1677842954571136	1.157803330279113	0.960590167058152	1.2007034778170078	1.321468226973685	1.1635486784767182	1.1728961746500781	1.1660902750760125	1.0	11.169584670896793														
IQEIIEQLDVTTSEYEKEKLNER	ddPTM_K562_Methotrexat_30min_R1	1	IQEIIEQLDVTTSEYEKEKLNER	23	2	P10809	P10809	HSPD1	60 kDa heat shock protein, mitochondrial	0		67.227	0.014534	7767300.0	4305.7	2654.6	6611.1	5711.6	2345.6	2502.9	1959.9	3286.3	3105.1	7014.4	False	True	4116.426583499609	3093.2275295150775	5223.520456027036	5210.872895831072	2654.087513510523	2986.550002014623	2399.4574655401625	3170.7189663074278	2960.7445787455454	5744.024189074288	0.7166450641571924	0.538512274269093	0.9093834364351558	0.9071815724144541	0.4620606435743889	0.5199403595297076	0.41773108652713753	0.5520030664805441	0.5154477908322843	1.0	12.487846109272919	-5.931970228262939	11.521224284631751	0.6320605424084392	1.230670843570875	0.0058765905490376635	0.2010338427342945	744711.8879049259	4467800.635688934	0.0520314650205092	9795736.011331417	1.1695795652409644e-06	5.931970228262939	0.5986103011624359	
IQELELSER	ddPTM_K562_Methotrexat_30min_R1	1	IQELELSER	9	0	E9PNW5	E9PNW5	C4orf50		0		120.99	0.0064340000000000005	12530000.0	3083.1	2554.2	2901.5	2769.6	2782.9	2906.6	2504.1	2652.5	2708.7	2694.1	False	True	2947.5706155997027	2976.2381360232844	2292.5148013435637	2526.7934680814037	3148.900128473923	3468.2593135385773	3065.7081685081475	2559.210071548688	2582.7731282239083	2206.1723836372385	1.3360563469388314	1.3490505810413898	1.0391367503041515	1.1453291169911068	1.4273137275349457	1.5720708586790397	1.389604996982975	1.1600227119738526	1.1707032267196553	1.0	11.107329807822618	-9.802175202017663	1.7561523753620292	1.0200858510949975	1.3155636330161191	0.3269527142733426	0.14289522158403198	0.4578014605987995	2.853877715435261	0.15321613896181802	0.045083024104433086	1.5769749619770352e-10	9.802175202017663	0.2954777819211216	
IQEQES(ph)SGEEDSDLS(ph)PEER	ddPTM_K562_Methotrexat_30min_R1	1	IQEQESSGEEDSDLSPEER	19	0	E7EMN6;Q6NXS1;P41236	E7EMN6	PPP1R2;PPP1R2P3	Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2	2	IQEQES(0.693)S(0.321)GEEDS(0.015)DLS(0.972)PEER	146.68	5.8387e-12	23710000.0	2208.1	1858.8	2844.8	1977.9	1923.4	1849.8	1648.1	2610.8	2281.9	2403.2	True	False	2111.034567904287	2165.9351058022417	2247.7153564922182	1804.5005778878567	2176.360813218852	2207.2476701932346	2017.7283784666276	2518.976684184474	2175.814967066908	1967.9571925158712	1.0727034998182574	1.1006007214177622	1.1421566307642592	0.9169409704389715	1.1058984522100066	1.1215933347470075	1.025290786882985	1.2799956695014132	1.105621085327221	1.0	10.942483123826664														
IQEQESS(ph)GEEDSDLS(ph)PEER	ddPTM_K562_Methotrexat_30min_R1	1	IQEQESSGEEDSDLSPEER	19	0	E7EMN6;Q6NXS1;P41236	E7EMN6	PPP1R2;PPP1R2P3	Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2	2	IQEQES(0.277)S(0.723)GEEDS(0.005)DLS(0.995)PEER	123.54	9.505e-05	26470000.0	2690.5	2339.2	3462.6	2751.4	2148.3	2141.7	1977.9	2969.5	2842.5	3127.4	True	False	2572.228841513736	2725.71304039843	2735.847579228753	2510.18903382408	2430.839105250111	2555.5532139976494	2421.49442374197	2865.061001871377	2710.352795428235	2560.9975548743932	1.004385512441418	1.064316924165168	1.0682741863699028	0.9801606522608316	0.9491766599399717	0.9978741327314501	0.9455278155705754	1.1187285190562772	1.058319165619495	1.0	11.322490160177605	-11.966206179800182	5.1737924467281085	0.9999999098091739	1.0201279292518335	0.013347040133811272	0.0532832751865056	5.959813117664749e-08	1.1993173616798158e-08	0.055521321855068806	0.013465838101055982	1.080920666127223e-12	11.966206179800182	0.020128019442659628	
IQFKPDDGIS(ph)PER	ddPTM_K562_Methotrexat_30min_R1	1	IQFKPDDGISPER	13	1	Q96I24	Q96I24	FUBP3	Far upstream element-binding protein 3	1	IQFKPDDGIS(1)PER	99.069	0.02225	0.0	787.21	696.95	802.84	866.99	655.28	600.02	539.4	709.12	803.64	945.79	True	False	752.6051909786391	812.1091413755496	634.3348554577518	790.9823327888125	741.4608057013883	715.9653730507863	660.3741807808372	684.1798476669578	766.2789518093045	774.4982661075176	0.9717325705079898	1.0485616003468377	0.8190268244831578	1.0212835423946665	0.9573434030108687	0.9244247590754379	0.8526477200520454	0.883384608600245	0.9893875626868454	1.0	9.597118198988554	-8.263516373928812	4.994846829256547	0.9175192913260035	0.963760878445933	0.04112461601063633	0.0699254575025013	0.4956475395287612	38.77016339887009	0.02416661694892783	0.022576358333311456	5.451093433903771e-09	8.263516373928812	0.04624158711992943	
IQIISTDSAVAS(ph)PQR	ddPTM_K562_Methotrexat_30min_R1	2	IQIISTDSAVASPQR	15	0	P49116;P49116-2;C9J2Y1;C9JMI6;C9JKS0	P49116	NR2C2	Nuclear receptor subfamily 2 group C member 2	1	IQIISTDSAVAS(1)PQR;IQIISTDSAVAS(1)PQR	144.15	1.1577e-08	32171000.0	2970.52	2174.41	3043.73	2870.9	2683.71	2104.17	2336.23	2631.0699999999997	2631.6499999999996	3132.81	True	False	2839.9394976002163	2533.694293849498	2404.892668031517	2619.2126543597988	3036.664904878634	2510.7710726513665	2860.1890477671777	2538.533776795328	2509.3051659063185	2565.427751450419	1.1070042787190544	0.9876303444589388	0.937423658363351	1.020965276796032	1.1836875558712543	0.9786949062322449	1.1148975238730108	0.9895167678606869	0.9781234979186726	1.0	11.324983681038464	-9.467484798866888	24.999471750829837	0.9873140141351546	1.0429902566111582	0.12582249085574382	0.06938126426822248	655.6838828041609	295913.08343640977	0.038972910053900155	0.018721818193039707	3.408122536688711e-10	9.467484798866888	0.05567624247600356	
IQPQPPDEDGDHS(ph)DKEDEQPQVVVLK	ddPTM_K562_Methotrexat_30min_R1	3	IQPQPPDEDGDHSDKEDEQPQVVVLK	26	1	Q96AT1	Q96AT1	KIAA1143	Uncharacterized protein KIAA1143	1	IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK	69.525	0.0028361999999999997	30797000.0	4428.08	3026.0099999999998	7450.81	4836.76	2645.7200000000003	2757.71	2499.94	3995.0499999999997	3851.86	6273.12	True	False	4233.426905233282	3526.006719124511	5886.9868023431445	4412.728760354354	2993.6785539926104	3290.598428245533	3060.6151826126184	3854.541827084105	3672.787869339737	5136.997180224352	0.824105358969341	0.6863945210440076	1.1459976705858417	0.8590093795149082	0.5827681910196932	0.6405684708010333	0.5957984937961266	0.7503492199533898	0.7149678577747113	1.0	12.326709566429992	-7.640541404015392	7.463819106705847	0.6925259878021498	0.8876536176175976	0.21161997565675672	0.1529378431088218	0.3145103548353467	19.25076997539093	0.04485947314066192	0.05795236129413758	2.2880135705004094e-08	7.640541404015392	0.19512762981544785	
IQPS(ph)SPPPNHPNNHLFR	ddPTM_K562_Methotrexat_30min_R1	2	IQPSSPPPNHPNNHLFR	17	0	H0Y4E8;Q9Y2K2-7;Q9Y2K2;Q9Y2K2-8	H0Y4E8	SIK3	Serine/threonine-protein kinase SIK3	1	IQPS(0.5)S(0.5)PPPNHPNNHLFR;IQPS(0.5)S(0.5)PPPNHPNNHLFR	90.476	0.0043764	38304000.0	6114.299999999999	5118.7	6417.6	6064.200000000001	5599.4	5066.6	4359.5	5422.6	5716.0	6864.4	True	False	5845.5226930560975	5964.478171976504	5070.633461693073	5532.561001277893	6335.819245886267	6045.6487435404115	5337.228848932259	5231.884084441061	5450.264407622793	5621.1906426040105	1.0399082800629167	1.0610702520513458	0.9020568388593394	0.984232941566796	1.1271311806907878	1.0755103549983445	0.9494836927394787	0.9307430430819539	0.9695925212559531	1.0	12.456660029387294	-8.782388520277133	24.90772636419684	0.9566833652375882	1.0292827645436442	0.2508639931327622	0.058153495470086226	362.4159532423808	430894.3664728625	0.026751176525952134	0.018057089001901568	1.6504846123993922e-09	8.782388520277133	0.07259939930605597	
IQQFDDGGS(ph)DEEDIWEEKHIAFTPESQR	ddPTM_K562_Methotrexat_30min_R1	3	IQQFDDGGSDEEDIWEEKHIAFTPESQR	28	1	H0YEN2;E9PQP7;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-2;Q5H9R7;Q5H9R7-5;Q5H9R7-3	H0YEN2	PPP6R3	Serine/threonine-protein phosphatase 6 regulatory subunit 3	1	IQQFDDGGS(1)DEEDIWEEKHIAFTPESQR;IQQFDDGGS(1)DEEDIWEEKHIAFTPESQR;IQQFDDGGS(1)DEEDIWEEKHIAFTPESQR	87.368	7.0399e-05	96241000.0	5904.0	4390.219999999999	8526.900000000001	7928.5	4250.59	3957.94	3961.21	5215.12	5036.05	6786.5	True	False	5644.467229249991	5115.629234019322	6737.220216983089	7233.420714790369	4809.617089040199	4722.755889158079	4849.612177699042	5031.701273641844	4801.92513471112	5557.399087470442	1.0156670666275975	0.9205078047306118	1.2122973554612333	1.301583816627213	0.8654438908092508	0.8498140613665615	0.8726406186363047	0.9054057832532089	0.864059798321378	1.0	12.440194131364152	-7.79933379308612	24.997257824006773	0.8849974731840504	1.1059268701575555	0.5162069837658552	0.10391190986067238	142.6591973257744	94105.10930516542	0.034809212255160614	0.039470765386661916	1.587326281320654e-08	7.79933379308612	0.2209293969735051	
IQRPNTTQEGEEMETDMDVADVAMES(ph)SPGSSISMEHR	ddPTM_K562_Methotrexat_30min_R1	1	IQRPNTTQEGEEMETDMDVADVAMESSPGSSISMEHR	37	1	A0A087X1S3	A0A087X1S3	HUWE1		1	IQRPNTTQEGEEMET(0.001)DMDVADVAMES(0.477)S(0.477)PGS(0.017)S(0.021)IS(0.007)MEHR	59.352	0.0084726	21996000.0	514.69	371.29	555.34	486.02	472.13	446.11	406.64	412.96	504.14	509.63	True	False	492.0648438724048	432.6393616490823	438.78172317013116	443.41138119472964	534.223370461171	532.3144438046837	497.83937128794946	398.43596273204355	480.70264143788586	417.3310685843311	1.1790755132168458	1.0366814124735066	1.0513996110056336	1.0624931009782428	1.280094895099379	1.27552076486996	1.192912315339278	0.9547239415546428	1.1518496407864471	1.0	8.7050485170956	-9.246939419145669	24.902374203910274	1.039965084650664	1.151566255346522	0.252719661197647	0.09321905474325347	1208.6481090102702	2075750.3423758275	0.04889815767420182	0.028069786263177136	5.663182807223562e-10	9.246939419145669	0.11160117069585795	
IQSSLSSAS(ph)PSK	ddPTM_K562_Methotrexat_30min_R1	2	IQSSLSSASPSK	12	0	Q5W0B1	Q5W0B1	RNF219	RING finger protein 219	1	IQSSLSSAS(0.938)PS(0.062)K;IQSSLSS(0.007)AS(0.938)PS(0.055)K	139.66	4.2075e-06	20179100.0	4052.4	3012.6000000000004	6345.8	3920.7	3549.4	3158.2	2398.04	4130.200000000001	4163.2	5462.3	True	False	3874.261348206754	3510.3809445555376	5013.903300488021	3576.9783182794486	4016.208313631588	3768.4774526999013	2935.8615136812737	3984.938524980353	3969.6537406954526	4473.024539230795	0.8661390775363357	0.7847891094197308	1.1209201417326091	0.7996777766156777	0.8978730785863823	0.8424897783699502	0.6563481796114045	0.890882330295828	0.8874652275835927	1.0	12.127034957721671														
IQVWHEEHR	ddPTM_K562_Methotrexat_30min_R1	4	IQVWHEEHR	9	0	P26038	P26038	MSN	Moesin	0	;;;	91.265	0.0077431	199956000.0	8622.800000000001	6971.900000000001	8828.800000000001	8813.4	6622.17	7389.4	7013.5	8408.0	7895.200000000001	9188.3	False	True	8243.752036649195	8123.8879729624705	6975.755532690695	8040.742905686248	7493.101427926321	8817.296969470151	8586.45590824324	8112.285874300228	7528.153875273533	7524.209833552588	1.0956302680300016	1.0796998160173241	0.9271080534707872	1.068649477295316	0.9958655584686719	1.1718568679665633	1.1411770934342893	1.0781578469708861	1.0005241801874474	1.0	12.877324367654577	-6.5363508564215085	24.999165309988843	1.0537510788033018	1.0916477900470771	0.04742271197601533	0.06894727605058018	790.8062214309089	1467440.7620321224	0.018689413564523256	0.049515397735374715	2.9083665669403404e-07	6.5363508564215085	0.03789671124377536	
IRAEEEDLAAVPFLAS(ph)DNEEEEDEKGNSGSLIR	ddPTM_K562_Methotrexat_30min_R1	3	IRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIR	33	2	A0A3B3IRP6;A0A0J9YVP0;O95714	A0A3B3IRP6	HERC2	E3 ubiquitin-protein ligase HERC2	1	IRAEEEDLAAVPFLAS(0.999)DNEEEEDEKGNS(0.001)GS(0.001)LIR;IRAEEEDLAAVPFLAS(1)DNEEEEDEKGNSGSLIR;IRAEEEDLAAVPFLAS(1)DNEEEEDEKGNSGSLIR	105.55	1.9522999999999998e-14	134837000.0	6417.9	4835.4	9833.2	7402.8	4689.5	4684.5	4473.1	6009.6	6671.4	9273.400000000001	True	False	6135.77680057648	5634.367662253149	7769.345698628822	6753.808017588462	5306.25144722357	5589.71332631647	5476.306540694781	5798.238961726295	6361.248070156524	7593.897398916737	0.8079878457999371	0.7419599404986544	1.0231038543840627	0.8893730929985815	0.6987520595130113	0.736079648259909	0.7211457112227999	0.7635392812330344	0.8376789593001284	1.0	12.890624791510323														
IREEYPDR	ddPTM_K562_Methotrexat_30min_R1	5	IREEYPDR	8	1	Q5JP53;P07437;Q5ST81;CON__ENSEMBL:ENSBTAP00000025008;Q5SQY0;A0A075B736;A6NNZ2;Q3ZCM7;Q9H4B7;Q9BVA1;Q13885;P68371	Q5JP53;Q9BVA1;P68371	TUBB;TUBB8;TUBB1;TUBB2B;TUBB2A;TUBB4B	Tubulin beta chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-8 chain;Tubulin beta-1 chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain	0	;;;;	140.35	8.4864e-06	531825000.0	18273.1	16179.6	20639.9	20174.300000000003	16809.2	15346.8	15028.6	18685.0	17720.899999999998	19905.2	False	True	17469.83640359215	18853.00389382287	16307.867050922303	18405.650441621416	19019.904430466016	18312.351900163016	18399.146112871527	18027.837959241177	16897.05922691441	16300.17539466834	1.0717575719649248	1.1566135601209262	1.0004718756742015	1.1291688583695707	1.1668527466696634	1.1234450830604463	1.12876982408973	1.1059904278783368	1.036618245987789	1.0	13.992599867911128	-9.868552495830851	2.955851575523793	1.0011225515842945	1.1124165941670863	0.4177909526651097	0.04450098145612796	0.2325340953995702	3.9149351543376474	0.04271792787487199	0.01161802973272964	1.3534664790100494e-10	9.868552495830851	0.11129404258279174	
IRLDETDDPDDYGDR	ddPTM_K562_Methotrexat_30min_R1	1	IRLDETDDPDDYGDR	15	1	P07384	P07384	CAPN1	Calpain-1 catalytic subunit	0		136.83	3.9475e-05	5942700.0	2147.3	2016.4	2781.3	1776.6	2149.0	1871.1	1793.7	2352.6	2927.7	2872.7	False	True	2052.9072631044223	2349.575827060276	2197.543138713375	1620.8482363494447	2431.631167519661	2232.6635937390874	2195.9828848101374	2269.857724533626	2791.5918660247125	2352.4261929678537	0.8726765877889014	0.9987883292933489	0.934160291737325	0.6890113029665598	1.0336694833566198	0.9490897527043465	0.9334970386635828	0.9649007188063748	1.1866862706977435	1.0	11.199933743977363	-9.589977223701528	6.330923108385278	1.0919725686982695	0.9189458408900064	0.3437874456396549	0.09665015461866362	0.2360396317800371	16.926184479182055	0.06678284276677447	0.024606228566678084	2.570530589079238e-10	9.589977223701528	-0.17302672780826311	
IRQEQTEDCPPS(ph)SPSR	ddPTM_K562_Methotrexat_30min_R1	1	IRQEQTEDCPPSSPSR	16	1	Q15008-4;C9J7B7;C9J0E9	Q15008-4	PSMD6	26S proteasome non-ATPase regulatory subunit 6	1	IRQEQT(0.001)EDCPPS(0.511)S(0.488)PSR	112.24	0.0056359999999999995	0.0	863.89	760.26	805.2	975.91	872.8	751.93	760.83	745.63	950.08	992.28	True	False	825.9144299926788	885.8800427895472	636.1995237090601	890.353485498022	987.5884983765283	897.2298306024427	931.4654949267417	719.4057702728925	905.9109881725445	812.5684766102074	1.0164244045475979	1.0902220161003215	0.7829488123426769	1.0957273277598836	1.2153911046321315	1.1041898085259436	1.1463224598775197	0.8853478703407719	1.1148734097484734	1.0	9.666345586437892														
IRQEVGPPLPPLLAPLIAT(ph)PPR	ddPTM_K562_Methotrexat_30min_R1	2	IRQEVGPPLPPLLAPLIATPPR	22	1	Q9Y2F5	Q9Y2F5	ICE1	Little elongation complex subunit 1	1	IRQEVGPPLPPLLAPLIAT(1)PPR;IRQEVGPPLPPLLAPLIAT(1)PPR	111.0	0.00011981	34520000.0	1579.63	1322.24	1730.29	1670.08	1472.23	1289.0700000000002	1284.75	2014.51	1973.5	2229.5	True	False	1510.191356595557	1540.717685762833	1367.1257748119097	1523.6666793664756	1665.8540501430764	1538.1645335798428	1572.8878916540257	1943.6585414648616	1881.752415752902	1825.7159457032853	0.8271776122401204	0.8438978086316337	0.7488162537164444	0.8345584552472881	0.9124387909650269	0.842499369740305	0.8615184061659342	1.0646007370638062	1.030692874311305	1.0	10.834246605513659	-9.20209522970142	5.092844026472414	1.0358461985429523	0.83669921219722	0.8295902846378158	0.04014882806230742	0.08428829282267823	4.58919760107541	0.02137826456904375	0.011860289401654825	6.279206567342614e-10	9.20209522970142	-0.19914698634573236	
IRTPS(ph)GEFLER	ddPTM_K562_Methotrexat_30min_R1	1	IRTPSGEFLER	11	1	B3KT28;B1ANM7;Q9UNN5-2;Q9UNN5	B3KT28	FAF1	FAS-associated factor 1	1	IRTPS(1)GEFLER	164.22	0.00013514	212660000.0	4129.9	3562.5	4764.2	4802.3	3940.9	3674.0	3306.1	4442.2	3841.7	4332.0	True	False	3948.354541002632	4151.142572853712	3764.259526645185	4381.289815051748	4459.1974258158325	4383.948502697562	4047.5770839442453	4285.96530813707	3663.1002055221297	3547.4328220617326	1.1130174238811625	1.1701821517344788	1.061122145353956	1.2350592766138375	1.257020964028909	1.2358087446881247	1.1409876626195936	1.2081878708124794	1.032605940482101	1.0	11.792559648808082	-9.833938381983453	5.233676693201106	1.0048590858341202	1.1787589446648372	0.5562196937296999	0.057792844191126576	0.16051793793476216	7.575422839622673	0.05858467146980092	0.015471603087591372	1.4657557886996438e-10	9.833938381983453	0.173899858830717	
IRVTQGK	ddPTM_K562_Methotrexat_30min_R1	1	IRVTQGK	7	1	H0YAG8;P11766	H0YAG8	ADH5	Alcohol dehydrogenase class-3	0		35.105	0.034095	5158700.0	324.41	320.65	676.52	536.46	360.01	315.93	386.28	394.91	576.24	399.84	False	True	310.14932483756616	373.63196238190693	534.5276971928135	489.42938470788204	407.3576252297592	376.9790012131847	472.91312301079313	381.02079146288145	549.4507281750451	327.42510147118276	0.9472374703222408	1.141121925909492	1.632518993782333	1.4947827228541228	1.2441246055950645	1.1513442296248728	1.4443398532546994	1.1636883969826477	1.6780959239418705	1.0	8.355021117511734	-6.52987679783684	24.410770398111723	1.3566202028040466	0.9957084524512331	0.28069107910704627	0.2068318091063427	127.60848849632318	445128.51681400783	0.05097717614725914	0.135591291524667	2.952046554686172e-07	6.52987679783684	-0.36091175035281353	
IS(ph)DFGMT(ph)RS(ph)FNVGSFYRRK	ddPTM_K562_Methotrexat_30min_R1	1	ISDFGMTRSFNVGSFYRRK	19	3	D6R9F2	D6R9F2	TXK		3	IS(0.997)DFGMT(0.999)RS(0.997)FNVGS(0.005)FY(0.002)RRK	50.053000000000004	0.033569999999999996	0.0	811.52	463.86	620.91	656.22	694.2	481.98	685.93	718.13	534.31	804.49	True	False	775.8465524866111	540.5049807281189	490.5894762371989	598.6902114472773	785.4994678883891	575.1158136445755	839.767263298109	692.8729608600415	509.47004472304667	658.7890653325123	1.1776858380231554	0.8204522648767832	0.7446836962747436	0.9087737531664992	1.1923383511107943	0.8729893131336292	1.2747134211680504	1.051737190735438	0.7733432012352854	1.0	9.363672798995825	-7.558122683216968	24.88398182722066	1.0361781096708031	0.8918644303894236	0.09348547082604841	0.16941209278291852	338.60816514480285	239072.29494743195	0.049839073536851373	0.06434222173174438	2.7661601264779765e-08	7.558122683216968	-0.1443136792813795	
IS(ph)PSSLSNNYNNMNNR	ddPTM_K562_Methotrexat_30min_R1	3	ISPSSLSNNYNNMNNR	16	0	Q9Y4E8	Q9Y4E8	USP15	Ubiquitin carboxyl-terminal hydrolase 15	1	IS(0.869)PS(0.038)S(0.082)LS(0.011)NNYNNMNNR;IS(0.935)PS(0.065)SLSNNYNNMNNR;IS(0.901)PS(0.058)S(0.031)LS(0.004)NNY(0.007)NNMNNR	186.08	2.0597e-08	125190500.0	10412.4	8112.1	10912.0	9666.9	8356.800000000001	8258.8	7835.0	9969.199999999999	9067.1	10830.8	True	False	9954.683363455722	9452.486642876243	8621.720321303113	8819.417885830482	9455.865677397998	9854.696215045888	9592.198195064628	9618.577585403653	8645.57250006239	8869.237167402174	1.1223832642612126	1.065760951530052	0.9720926567384195	0.9943829124611983	1.0661419351995578	1.111109786449916	1.081513326796538	1.0844875837524777	0.9747819724381892	1.0	13.11459431003032	-9.767472537970148	24.992010724327425	0.9873909509810344	1.0594872950711105	0.3079110789475431	0.04473138892686083	220.72463240128096	914293.7205153186	0.043985267237641706	0.012539037832732134	1.7081557295843418e-10	9.767472537970148	0.07209634409007615	
ISAPELLLHS(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	4	ISAPELLLHSPAR	13	0	Q5VUA4	Q5VUA4	ZNF318	Zinc finger protein 318	1	ISAPELLLHS(1)PAR;ISAPELLLHS(1)PAR;ISAPELLLHS(1)PAR;ISAPELLLHS(1)PAR	156.0	4.5959e-09	82130000.0	23080.6	19536.1	28188.5	25004.9	21935.699999999997	20913.5	20049.399999999998	25534.699999999997	24064.5	26124.1	True	False	22066.0044599301	22764.10846807788	22272.119068644854	22812.75923961174	24820.629037394618	24954.73789089968	24545.98832062909	24636.630127794244	22945.746647522523	21392.772342295226	1.0314700734838298	1.0641027775101133	1.0411048513151842	1.0663769461290946	1.160234337104698	1.1665032232200294	1.1473963228272057	1.1516333523115025	1.0725934105397337	1.0	14.384835836587603	-7.621524348273706	5.723728655060333	1.1277739382109442	1.048425593860677	0.2947877021301867	0.048479203428965396	0.21914137385793575	10.60007990827222	0.013872086287311944	0.017997416470898694	2.390427914703944e-08	7.621524348273706	-0.07934834435026716	
ISDEDWDIIHR	ddPTM_K562_Methotrexat_30min_R1	2	ISDEDWDIIHR	11	0	A0A2R8YDT8;A0A2R8YF45;E7ER27;A0A2R8YD50;P51659-3;P51659;P51659-2	A0A2R8YDT8	HSD17B4	Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2	0	;	141.08	5.1864e-05	22508000.0	8654.0	6757.7	9034.1	9207.0	6696.6	5951.700000000001	6532.1	9908.3	9863.9	12014.9	False	True	8273.580522007016	7874.295063739943	7137.9658682812005	8399.836604789676	7577.320277530091	7101.78179191755	7997.089703890451	9559.819472922096	9405.329441978743	9838.88518323858	0.8409062986223073	0.800323910391241	0.7254852287982141	0.8537386551780833	0.7701401262857231	0.7218075686070684	0.8128044544634191	0.9716364501547494	0.9559344648112738	1.0	13.264279141717653	-9.227378077368808	4.192117420775988	0.9753413006411553	0.7846466382834104	0.8125188704454259	0.041204098415748354	0.08869826624637668	3.588566488075259	0.021963244483580696	0.0114700578476706	5.924093749021796e-10	9.227378077368808	-0.1906946623577449	
ISDYFEYQGGNGS(ph)SPVR	ddPTM_K562_Methotrexat_30min_R1	2	ISDYFEYQGGNGSSPVR	17	0	Q9UKI8-4;Q9UKI8-5;Q9UKI8;Q9UKI8-2;C9JWT6;B3KRP1	Q9UKI8-4	TLK1	Serine/threonine-protein kinase tousled-like 1	1	ISDYFEYQGGNGS(0.801)S(0.199)PVR;ISDYFEYQGGNGS(0.5)S(0.5)PVR	163.44	1.7155e-08	184869000.0	4175.6	3733.3999999999996	5233.6	4433.6	3915.1	4002.1	3951.4	4925.6	4915.8	5295.3	True	False	3992.0456237222684	4350.280893050399	4135.138881375731	4044.9131716080697	4430.004273595263	4775.449184171451	4837.602035479052	4752.363856143345	4687.265530964333	4336.269857493884	0.9206174327050398	1.0032311262944813	0.9536165915111208	0.9328093740793609	1.0216163705631438	1.1012804417415543	1.1156136943642407	1.0959566660572042	1.0809441490049019	1.0	12.082238826859788	-8.009506502532156	3.5817871058825945	1.0863087533264781	0.9567447386306259	0.7300494786631093	0.03589749161110382	0.1146739690690193	3.15940319082453	0.011638120555942008	0.012512930946995172	9.783483062242e-09	8.009506502532156	-0.12956401469585221	
ISDYFEYQGGNGSS(ph)PVR	ddPTM_K562_Methotrexat_30min_R1	3	ISDYFEYQGGNGSSPVR	17	0	Q9UKI8-4;Q9UKI8-5;Q9UKI8;Q9UKI8-2;C9JWT6;B3KRP1	Q9UKI8-4	TLK1	Serine/threonine-protein kinase tousled-like 1	1	ISDYFEYQGGNGS(0.021)S(0.979)PVR;ISDYFEYQGGNGS(0.144)S(0.856)PVR;ISDYFEYQGGNGS(0.416)S(0.584)PVR	218.28	2.0176999999999998e-30	193144000.0	6631.099999999999	5466.5	8570.7	6746.4	6731.7	5999.0	5995.3	7084.4	7615.7	7948.5	True	False	6339.604783854949	6369.746210387319	6771.82719554551	6154.95358646172	7617.036542760398	7158.221847491197	7339.898639294321	6835.237636523857	7261.6477692674825	6508.949627460226	0.9739827693717528	0.9786135359712064	1.040387095173735	0.9456139529018549	1.1702405117141066	1.099750690540267	1.1276625353387977	1.0501291341520103	1.1156404926889805	1.0	12.668209033964247	-7.751985723193625	24.999960193340094	1.0983906265354397	0.9881994742850888	0.5514838844048593	0.04812447631829794	145.88675004767586	385792.2152307576	0.01362529066928969	0.01735060010846252	1.7701671490596473e-08	7.751985723193625	-0.11019115225035092	
ISGLIYEETR	ddPTM_K562_Methotrexat_30min_R1	3	ISGLIYEETR	10	0	P62805	P62805	HIST1H4A	Histone H4	0	;;	145.9	2.8711000000000003e-06	130693000.0	6133.700000000001	5262.700000000001	7134.7	6756.5	6112.8	5548.4	5254.9	6863.4	7055.6	6783.2	False	True	5864.069892285002	6132.271724395011	5637.223971444401	6164.168135142982	6916.740344725073	6620.54977473248	6433.445091926628	6622.0103317878475	6727.586696015289	5554.696749448098	1.0556957754476233	1.103979569182476	1.0148571966605564	1.109721810782099	1.245205752305435	1.1918832068357796	1.1581991568785175	1.1921461477524935	1.2111528314635227	1.0	12.439492436598787	-7.52986846477344	22.158744549328038	1.1769508561500754	1.0626796638489684	0.3548673439606246	0.06479741897151342	39.747405741735406	126003.97700263826	0.017836320453159023	0.023109647532512587	2.9521031978813552e-08	7.52986846477344	-0.11427119230110705	
ISHLSGSGS(ph)GDER	ddPTM_K562_Methotrexat_30min_R1	1	ISHLSGSGSGDER	13	0	A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37	A0A494C001	RBM15	Putative RNA-binding protein 15	1	ISHLS(0.012)GS(0.023)GS(0.965)GDER	107.39	0.0026905	7356600.0	965.88	789.22	1252.8	1039.1	833.92	794.17	725.28	1004.4	851.14	1111.5	True	False	923.4210717120562	919.6251905537141	989.8544005249753	948.0037163068264	943.5950968906441	947.6321127891459	887.9425024781721	969.0746827006604	811.5706871770583	910.196579344787	1.0145292705634963	1.0103588734817202	1.0875171616636163	1.0415373314073046	1.0366937410047172	1.04112906408779	0.9755502521415377	1.0646872386603095	0.8916433060661189	1.0	9.830034354226745	-9.752071420982626	24.999978511306193	0.9458216392767892	1.0336265096699213	0.46789437587343874	0.03761221937379375	144.32938016132124	385174.6214500013	0.025101831721405128	0.009202795679970602	1.7698178827185192e-10	9.752071420982626	0.08780487039313212	
ISNLS(ph)PEEEQGLWK	ddPTM_K562_Methotrexat_30min_R1	1	ISNLSPEEEQGLWK	14	0	F5GX09;Q5HYJ3-3;Q5HYJ3-2;Q5HYJ3	F5GX09	FAM76B	Protein FAM76B	1	IS(0.001)NLS(0.999)PEEEQGLWK	181.69	6.3743e-05	11591000.0	2745.4	2134.3	3947.3	2820.6	2034.2	2186.8	1898.3	2087.0	2336.8	2865.4	True	False	2624.715503249139	2486.9567981029277	3118.8156730461674	2573.322377264012	2301.732955313399	2609.3681507074107	2324.042097471754	2013.5990270771379	2228.16267804985	2346.448293706301	1.1185908124586479	1.0598813554824549	1.3291644573679842	1.0966882944602865	0.9809433949544772	1.1120501388018307	0.990451016417176	0.8581476235713614	0.9495895068415873	1.0	11.19626295417576	-8.347839966785058	0.9509224385470653	0.9312105220145391	1.1547837397601388	0.4789542699421002	0.08735922001652544	0.48537523071175676	0.9262925161025908	0.056255075905869804	0.04728061158130181	4.489107786347264e-09	8.347839966785058	0.22357321774559968	
ISREPEPAAGPQAEESATVSAPAPMS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	5	ISREPEPAAGPQAEESATVSAPAPMSPTR	29	1	Q9BWG6-2;Q9BWG6	Q9BWG6-2	SCNM1	Sodium channel modifier 1	1	ISREPEPAAGPQAEESATVSAPAPMS(0.794)PT(0.205)R;ISREPEPAAGPQAEESATVSAPAPMS(0.793)PT(0.207)R;ISREPEPAAGPQAEES(0.019)AT(0.092)VS(0.077)APAPMS(0.621)PT(0.191)R;ISREPEPAAGPQAEESATVSAPAPMS(0.812)PT(0.188)R;ISREPEPAAGPQAEESATVSAPAPMS(0.93)PT(0.07)R	145.36	4.255e-28	357623000.0	5787.23	4908.91	6451.7699999999995	5767.839999999999	4579.51	4569.72	4467.45	4958.3	5508.419999999999	6193.26	True	False	5532.830298633538	5720.023940296792	5097.631645653756	5262.182422349306	5181.795834326643	5452.753715772207	5469.389384370321	4783.913778608804	5252.334756514618	5071.600600083575	1.0909436162110957	1.1278537864757197	1.0051327081177788	1.0375782395527342	1.0217279007028377	1.0751544030660363	1.078434564480529	0.9432749452963567	1.0356365121551694	1.0	12.308225419144303	-3.000000000000017	0.2755662806176181	1.006140826993997	1.761702364757989	0.31781636244419864	0.04173434436874996	63.65313991659189	0.8939428031042359	0.04889797454513351	23.03532526856808	0.0009999999999999612	3.000000000000017	0.7555615377639919	
ISREPEPAAGPQAEESATVSAPAPMS(ph)PTRR	ddPTM_K562_Methotrexat_30min_R1	2	ISREPEPAAGPQAEESATVSAPAPMSPTRR	30	2	Q9BWG6-2;Q9BWG6	Q9BWG6-2	SCNM1	Sodium channel modifier 1	1	ISREPEPAAGPQAEES(0.001)AT(0.035)VS(0.15)APAPMS(0.407)PT(0.407)RR;ISREPEPAAGPQAEES(0.001)AT(0.008)VS(0.006)APAPMS(0.493)PT(0.493)RR	66.36	0.00010999	34905000.0	1079.28	919.92	1123.87	1217.6299999999999	1022.94	1069.25	1214.37	1150.18	1320.99	1343.02	True	False	1031.836143493382	1071.9211440335678	887.9850455922764	1110.8822683925325	1157.4745400198055	1275.867429643268	1486.7233850849561	1109.7275174717695	1259.5774632305163	1099.7860638701184	0.9382153287725593	0.9746633270306275	0.8074161646197627	1.01008942092189	1.0524542709212763	1.160105107309256	1.3518296275306632	1.0090394431501226	1.1452931661982477	1.0	10.10300719512904	-7.7817942185481686	2.174615884751472	1.1441047714933352	0.9149640971832277	0.47290619092767605	0.10134075794373035	0.26113375323890653	2.536932521693558	0.034570170262364315	0.04381679784271789	1.6527447316108573e-08	7.7817942185481686	-0.22914067431010754	
ISS(ph)TPTTETIR	ddPTM_K562_Methotrexat_30min_R1	1	ISSTPTTETIR	11	0	A0A075B754;Q96QE3-2;Q96QE3	A0A075B754	ATAD5	ATPase family AAA domain-containing protein 5	1	IS(0.074)S(0.452)T(0.452)PT(0.02)T(0.002)ETIR	124.6	0.0019309999999999998	18820000.0	3179.4	2432.1	3208.3	3208.1	2748.1	2486.2	2642.0	3050.5	3044.7	3377.5	True	False	3039.637382906066	2833.963186368426	2534.9216740136335	2926.850853896573	3109.523318501991	2966.6229633659964	3234.535753843111	2943.21218596014	2903.152561562126	2765.802021355842	1.099007578791191	1.0246442675528777	0.9165231836698755	1.0582286191481565	1.124275452289116	1.0726085744603326	1.1694747956896379	1.0641442023812422	1.0496602935227273	1.0	11.433482175412802	-7.514248181948645	24.804587159842644	1.087691897077204	1.0099934284781875	0.1960961110547499	0.059008409529575076	505.8283178587521	1453773.1162808621	0.01715944627790789	0.02331320730873318	3.060214143769797e-08	7.514248181948645	-0.07769846859901652	
ISST(ph)PTTETIR	ddPTM_K562_Methotrexat_30min_R1	1	ISSTPTTETIR	11	0	A0A075B754;Q96QE3-2;Q96QE3	A0A075B754	ATAD5	ATPase family AAA domain-containing protein 5	1	IS(0.004)S(0.023)T(0.887)PT(0.077)T(0.008)ET(0.001)IR	134.98	0.00059466	17776000.0	2675.3	2316.8	2813.9	2782.3	2568.6	2134.4	2274.3	2754.4	2955.0	3192.2	True	False	2557.6970153137718	2699.61182113333	2223.3008442187333	2538.3800787994255	2906.4159222387148	2546.8425923129216	2784.3696687984025	2657.5261907912172	2817.622694983443	2614.061646949553	0.9784379103294847	1.0327269153287217	0.85051584258282	0.9710482848641143	1.111839089805063	0.9742855893566734	1.0651507289614184	1.0166272068955928	1.077871556040552	1.0	11.352077449016434	-7.547125326681664	24.241488826360765	1.0398306577694942	0.9532777504949861	0.348073816074154	0.055856674451915125	176.30711545053057	176268.65168536446	0.01611336390143835	0.020803422867037267	2.8371001931211455e-08	7.547125326681664	-0.08655290727450815	
ISTASQVSQGTGS(ph)PVPK	ddPTM_K562_Methotrexat_30min_R1	2	ISTASQVSQGTGSPVPK	17	0	Q9ULM3	Q9ULM3	YEATS2	YEATS domain-containing protein 2	1	ISTASQVSQGTGS(1)PVPK;ISTASQVSQGT(0.001)GS(0.999)PVPK	221.79	6.8452e-31	31659000.0	7574.0	5330.6	11005.1	7777.799999999999	5710.1	5375.3	4536.1	7344.7	7090.6	9606.7	True	False	7241.056028851531	6211.391045292356	8695.27990358989	7095.9323498135245	6461.07823622802	6414.00064957817	5553.43589440111	7086.382737984411	6760.959553654684	7866.833539173703	0.9204536987841361	0.7895668586810816	1.1053087446544856	0.9020061648029799	0.821306082562243	0.8153217705241883	0.7059302661925166	0.9007922568460414	0.8594257803966225	1.0	12.9415673414135	-7.618786337894576	5.460598232702176	0.8371714225643383	0.9357637923023356	0.12855318656305292	0.09976222650797645	0.37617955300911704	17.38490942751055	0.029661433687215962	0.038543987499443905	2.4055459778487746e-08	7.618786337894576	0.09859236973799734	
ISTY(ph)GLPAGGIQPHPQTK	ddPTM_K562_Methotrexat_30min_R1	2	ISTYGLPAGGIQPHPQTK	18	0	Q9Y5K6	Q9Y5K6	CD2AP	CD2-associated protein	1	IS(0.119)T(0.228)Y(0.653)GLPAGGIQPHPQTK;IS(0.061)T(0.236)Y(0.703)GLPAGGIQPHPQTK	94.61	0.0021819	27854000.0	9638.9	6296.400000000001	14851.5	10546.5	7071.0	7171.8	6729.0	9352.1	9885.5	13041.0	True	False	9215.185497292976	7336.773079499266	11734.373107755977	9621.904719497588	8000.960439986747	8557.648849114417	8238.14954110911	9023.181342179256	9425.925262693336	10679.14853012629	0.8629138803806861	0.6870185444843235	1.0988116772280916	0.9009992409370302	0.7492133307646887	0.8013418696231221	0.7714238188437001	0.8449345298199116	0.8826476414390565	1.0	13.382509002198997	-10.151411281317905	2.546205319479821	0.9998246725501732	0.8387719967886185	0.1768474170341634	0.10445246207534592	1.106050645376243	13.508465731353473	0.10355359736626861	0.0280121530606905	7.056489809351482e-11	10.151411281317905	-0.1610526757615547	
ISVAAASKLLANMVYQYKGMGLS(ph)MGT(ph)MICGWDK	ddPTM_K562_Methotrexat_30min_R1	1	ISVAAASKLLANMVYQYKGMGLSMGTMICGWDK	33	2	P28074-3;P28074;H0YJM8;P28074-2	P28074-3	PSMB5	Proteasome subunit beta type-5	2	ISVAAASKLLANMVY(0.491)QY(0.491)KGMGLS(0.509)MGT(0.509)MICGWDK	43.068000000000005	0.010393000000000001	21955000.0	663.69	587.28	655.2	479.53	508.89	439.14	528.84	467.75	493.43	472.39	True	False	634.5149822799672	684.3180379468151	517.6824738377749	437.49034941835475	575.8179547878452	523.9975899495389	647.4458319691104	451.2989673767761	470.49054700023004	386.83559344730895	1.6402704224434166	1.7690151825184266	1.3382493302242846	1.1309464713927508	1.4885340556602056	1.354574394977211	1.6736976714044265	1.1666428193822544	1.2162545406109735	1.0	8.5955767356945	-3.000000007151088	0.05299860545736232	0.2988942796566337	3.473869040121949	0.4569930867403095	0.1802317591224427	448.6947882808982	1.7938080876173255	24.205861248381947	114.24760373595365	0.000999999983534011	3.000000007151088	3.1749747604653153	
ISYIPDEEVS(ph)SPSPPQR	ddPTM_K562_Methotrexat_30min_R1	2	ISYIPDEEVSSPSPPQR	17	0	F8W930;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4;Q9Y6M1-1;Q9Y6M1	F8W930	IGF2BP2	Insulin-like growth factor 2 mRNA-binding protein 2	1	ISYIPDEEVS(0.621)S(0.377)PS(0.002)PPQR;ISYIPDEEVS(0.606)S(0.27)PS(0.124)PPQR	262.73	5.7366999999999984e-95	129039000.0	5191.7	4672.5	6010.5	5523.0	4694.2	4662.0	4429.4	5363.6	5836.8	5676.2	True	False	4963.47908436605	5444.551206079711	4748.978188342408	5038.807165010682	5311.569579604832	5562.865519753956	5422.8057032826155	5174.959147882581	5565.448441989631	4648.185176497418	1.0678316151135394	1.1713283785699744	1.02168437960575	1.084037527267279	1.1427190135327825	1.1967822512496766	1.166650100495545	1.1133289555779073	1.1973379352720634	1.0	12.182451829285114	-6.216770367010848	21.540150756535848	1.1252127337546705	1.0678305190941675	0.054775549831411086	0.0653508916453603	15155.443635501711	7307222.782281221	0.016214067470911975	5.402911903525962	6.070572259474185e-07	6.216770367010848	-0.05738221466050297	
ISYIPDEEVSS(ph)PSPPQR	ddPTM_K562_Methotrexat_30min_R1	2	ISYIPDEEVSSPSPPQR	17	0	F8W930;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4;Q9Y6M1-1;Q9Y6M1	F8W930	IGF2BP2	Insulin-like growth factor 2 mRNA-binding protein 2	1	ISYIPDEEVS(0.225)S(0.765)PS(0.01)PPQR;ISYIPDEEVS(0.155)S(0.53)PS(0.315)PPQR	194.67	1.7215999999999998e-11	121098000.0	5604.0	4959.2	7031.3	6350.7	5041.8	5089.4	4871.0	5399.0	5679.1	6132.700000000001	True	False	5357.654870040132	5778.623508012946	5555.526218399795	5793.943991097835	5704.885072312992	6072.854520857094	5963.445744500299	5209.114109817666	5415.079880568686	5022.008602921977	1.06683506414602	1.1506598185934498	1.1062359023374428	1.1537104870204165	1.1359767621651808	1.2092481317781292	1.187462271775194	1.0372571060087041	1.0782697340299272	1.0	12.294048784673778	-9.274275304209072	24.70472063094071	1.043322548462641	1.1456237080758362	0.5812229209989643	0.04108082914395484	524.3364430345313	1009159.4821030372	0.02296050769735706	0.011146333868337834	5.317710566818878e-10	9.274275304209072	0.1023011596131953	
ISYIPDEEVSSPS(ph)PPQR	ddPTM_K562_Methotrexat_30min_R1	1	ISYIPDEEVSSPSPPQR	17	0	F8W930;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4;Q9Y6M1-1;Q9Y6M1	F8W930	IGF2BP2	Insulin-like growth factor 2 mRNA-binding protein 2	1	ISYIPDEEVS(0.013)S(0.013)PS(0.973)PPQR	89.87700000000001	0.0068138999999999995	48336000.0	1113.3	893.77	1542.0	1164.9	1081.8	1165.3	1075.4	1307.4	1067.2	1620.1	True	False	1064.3606650277798	1041.450301007569	1218.3552726768148	1062.7750256239265	1224.075661713712	1390.4777327690433	1316.5858250124452	1261.418000958625	1017.5861049361525	1326.6841909100217	0.8022713109272037	0.7850024204277279	0.9183461150924697	0.8010761211339451	0.9226579091698328	1.0480849491507571	0.9923882669539842	0.950805029261238	0.7670145705423328	1.0	10.373609271472674	-7.883069272443101	5.231783940739862	0.9544892263651139	0.8308151166195064	0.37263855930015	0.0768450690010162	0.24192518301636026	10.118374213937573	0.024974799086963508	0.02854947055187231	1.3089731176803694e-08	7.883069272443101	-0.12367410974560755	
ISYT(ph)PPES(ph)PVPSYASSTPLHVPVPR	ddPTM_K562_Methotrexat_30min_R1	1	ISYTPPESPVPSYASSTPLHVPVPR	25	0	P41212	P41212	ETV6	Transcription factor ETV6	2	IS(0.051)Y(0.095)T(0.864)PPES(0.99)PVPSY(0.001)ASSTPLHVPVPR	96.505	3.3835000000000003e-06	41270000.0	2468.2	2340.3	3181.2	3174.0	2284.6	2339.8	2174.4	2447.0	2793.9	2943.6	True	False	2359.700883339233	2726.9947967016274	2513.5095936702196	2895.740347952909	2585.064944306849	2791.9332353325412	2662.064550778371	2360.937623027195	2664.0121988203846	2410.4855159328067	0.9789317827226515	1.1313051991711878	1.0427399696270503	1.2013099970162313	1.0724250061741125	1.1582451820923398	1.10436861502908	0.9794448493558204	1.1051766049668497	1.0	11.23510804559115	-9.228091949713608	23.31219569236281	1.0317330463873542	1.102846279255708	0.19313337629020855	0.06527204199623368	420.78041745087364	294155.433321585	0.029199313299012118	0.01685611726723553	5.914364007973847e-10	9.228091949713608	0.07111323286835391	
ISYT(ph)PPESPVPSYASSTPLHVPVPR	ddPTM_K562_Methotrexat_30min_R1	1	ISYTPPESPVPSYASSTPLHVPVPR	25	0	P41212	P41212	ETV6	Transcription factor ETV6	1	IS(0.071)Y(0.003)T(0.906)PPES(0.02)PVPSYASSTPLHVPVPR	111.0	1.6322e-07	15350000.0	1701.7	1182.1	1769.9	1794.8	1326.8	1333.1	1475.5	1433.1	1527.2	1716.6	True	False	1626.8953055580466	1377.4219327355438	1398.4221771145867	1637.4526706067682	1501.2974560563448	1590.7027079330737	1806.4184348204035	1382.697060711188	1456.2008053396667	1405.707105805903	1.1573501327826998	0.9798783310167996	0.9948176055586346	1.1648604918077892	1.068001612751071	1.1316032346732083	1.2850603282571937	0.983630981874049	1.0359204981786125	1.0	10.457080309356732	-5.883162462390884	19.076746578894127	1.0793094296376766	14.38034168102528	0.06545267792319376	0.09320262222469437	1202.456380221469	196683.15904110484	0.02331342556510431	1246.4720080392617	1.3086922712614777e-06	5.883162462390884	13.301032251387603	
IT(ph)HSPDSVK	ddPTM_K562_Methotrexat_30min_R1	1	ITHSPDSVK	9	0	A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2	A0A1W2PNZ9	JMJD1C	Probable JmjC domain-containing histone demethylation protein 2C	1	IT(0.495)HS(0.495)PDS(0.01)VK	96.171	0.023135	21409000.0	2596.5	1997.9	4148.1	2932.2	1892.0	1754.1	1751.3	2361.0	2199.3	3041.4	True	False	2482.3609689613136	2328.019016506508	3277.4704971405267	2675.1385785341904	2140.8311628418774	2093.0549996139866	2144.073605490324	2277.9622917724614	2097.055023037931	2490.5729882314317	0.9967027590402201	0.9347322995579607	1.3159503907845218	1.0741056741460204	0.8595737498791762	0.8403909499959186	0.8608756360972346	0.9146338222314271	0.8419970155249535	1.0	11.282261975623026	-7.746680232722854	9.41985028706518	0.8783690866524357	1.0870698121584548	0.46494883240244445	0.10171266795961993	0.18875840976044247	105.0071379123076	0.031258574625366194	0.039201225265907746	1.7919247471500072e-08	7.746680232722854	0.20870072550601904	
IT(ph)HSPTVSQVTER	ddPTM_K562_Methotrexat_30min_R1	1	ITHSPTVSQVTER	13	0	P16157-10;P16157-8;P16157-5;P16157-16;P16157-3;P16157;P16157-21;P16157-12;P16157-14;H0YBS0;P16157-11;P16157-9;P16157-6;P16157-7;P16157-4;P16157-13;P16157-15;A0A2R8Y4B0	P16157-10;H0YBS0	ANK1	Ankyrin-1	1	IT(0.861)HS(0.133)PT(0.005)VS(0.001)QVTER	99.834	0.014522	212170000.0	1377.2	1537.2	2121.2	1655.6	1312.8	1290.8	1283.8	1602.2	1434.7	1566.8	True	False	1316.6599370127178	1791.1961720675733	1675.9891079131378	1510.4561184848244	1485.4562106653368	1540.2288315955398	1571.7248299711516	1545.8497178643945	1368.0011101498285	1283.0373373975813	1.0262054724637508	1.396059272679238	1.3062668240914883	1.177250321918552	1.1577653801395422	1.200455190742638	1.2250031890413438	1.2048361125638656	1.066220810786833	1.0	10.325347439263139	-9.853890496122501	2.80853236550339	1.0012242906050524	1.219786000611445	0.39145004429896957	0.09064782508702787	0.24655476814596103	3.759783237554663	0.08579145559530066	0.02352179020572093	1.3999402618071752e-10	9.853890496122501	0.21856171000639257	
IT(ph)PPAAKPGSPQAK	ddPTM_K562_Methotrexat_30min_R1	1	ITPPAAKPGSPQAK	14	1	A0A494C1F2;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A0A0MSW3;A0A494BZU9	A0A494C1F2	NUP214	Nuclear pore complex protein Nup214	1	IT(0.543)PPAAKPGS(0.457)PQAK	111.31	0.030601999999999997	29118000.0	2623.6	1292.6	4378.8	2532.8	1258.4	1294.6	1037.9	1586.4	1804.5	2598.1	True	False	2508.269685409938	1506.180179556691	3459.749719842563	2310.7533564256855	1423.901657145993	1544.7631278149865	1270.675495425345	1530.6054128199198	1720.6091888655226	2127.558913896258	1.1789425284663322	0.7079381772786639	1.6261593026848908	1.0861054616785855	0.6692654421204074	0.7260730209280167	0.59724573882578	0.7194185800556184	0.8087245799057676	1.0	11.054983366565885	-7.699142238218237	5.701585388601192	0.7304184591044485	1.158815362442336	0.417735320943891	0.22908310465272616	0.1904004977670972	11.991648797189958	0.06776904005855806	0.08701615051496135	1.999206990918012e-08	7.699142238218237	0.4283969033378876	
ITHS(ph)PDSVK	ddPTM_K562_Methotrexat_30min_R1	1	ITHSPDSVK	9	0	A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2	A0A1W2PNZ9	JMJD1C	Probable JmjC domain-containing histone demethylation protein 2C	1	IT(0.002)HS(0.866)PDS(0.132)VK	141.91	3.7528000000000004e-05	17888000.0	3007.7	2440.1	4159.5	3593.3	2183.2	1802.4	1969.1	2589.7	2782.9	4074.3	True	False	2875.485109318292	2843.2850503916775	3286.477792930744	3278.2809679581555	2470.329066974835	2150.6882910348627	2410.7207997321975	2498.6187831440657	2653.5235864194315	3336.4047892257895	0.8618513912352782	0.8522002664585132	0.9850356897771295	0.9825789060562038	0.7404164731306698	0.6446125176357658	0.7225504553635422	0.7488955750251961	0.7953242349334896	1.0	11.704078619002544	-7.772036232037598	24.985036466680306	0.7535727872380399	0.9201596227151809	0.34241113997460493	0.09571972686048166	205.1557284565107	483710.222510596	0.02929272361173642	0.03355515549334006	1.6902999085192518e-08	7.772036232037598	0.16658683547714104	
ITHS(ph)PTVSQVTER	ddPTM_K562_Methotrexat_30min_R1	6	ITHSPTVSQVTER	13	0	P16157-10;P16157-8;P16157-5;P16157-16;P16157-3;P16157;P16157-21;P16157-12;P16157-14;H0YBS0;P16157-11;P16157-9;P16157-6;P16157-7;P16157-4;P16157-13;P16157-15;A0A2R8Y4B0	P16157-10;H0YBS0	ANK1	Ankyrin-1	1	IT(0.021)HS(0.732)PT(0.246)VS(0.001)QVTER;ITHS(0.999)PT(0.001)VSQVTER;IT(0.01)HS(0.955)PT(0.035)VSQVTER;IT(0.011)HS(0.894)PT(0.095)VSQVTER;ITHS(1)PTVSQVTER;ITHS(0.993)PT(0.007)VSQVTER	196.37	2.3973000000000004e-07	3492392000.0	12880.69	10581.9	13945.8	13673.099999999999	11884.699999999999	10577.2	9377.13	11770.699999999999	12148.2	13083.18	True	False	12314.47029050272	12330.379113454239	11018.767160633148	12474.400551857247	13447.746364179115	12621.094203247865	11480.190103495395	11356.717809303731	11583.43283356949	10713.689323393723	1.1494145404808067	1.1508994466108342	1.0284755165126243	1.1643421957942115	1.2551928619785044	1.1780343654066256	1.0715440551769586	1.0600193328833918	1.0811805797165175	1.0	13.387167745914919	-8.848968536724577	5.546122163772133	1.0558458058716798	1.153376715612088	0.446877386155213	0.055301034791839634	0.2357833926945572	11.57953496002396	0.025900883846025468	0.017393604653060016	1.415896353499062e-09	8.848968536724577	0.09753090974040823	
ITKPGSIDSNNQLFAPGGRLS(ph)WGK	ddPTM_K562_Methotrexat_30min_R1	1	ITKPGSIDSNNQLFAPGGRLSWGK	24	2	Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6	Q04637-9	EIF4G1	Eukaryotic translation initiation factor 4 gamma 1	1	ITKPGSIDS(0.001)NNQLFAPGGRLS(0.999)WGK	66.045	0.014065000000000001	7284700.0	848.08	690.67	1440.1	760.73	629.83	554.23	537.57	599.78	928.21	1214.2	True	False	810.7994186623198	804.7914781172984	1137.8426901309215	694.0379820095202	712.6636846155926	661.3271036064423	658.1337566969873	578.6853974414599	885.0577196990124	994.2966141614402	0.8154502460476782	0.8094078433486724	1.1443694707645602	0.6980190539971324	0.7167515955152193	0.6651205426905589	0.6619088784205883	0.5820047953492287	0.8901345002018773	1.0	9.957532484163147														
ITPAHDQNDYEVGQR	ddPTM_K562_Methotrexat_30min_R1	1	ITPAHDQNDYEVGQR	15	0	A0A140T936;P26640	A0A140T936	VARS	Valine--tRNA ligase	0		143.58	1.0889e-06	16801000.0	1282.7	1338.7	1774.3	1661.0	1410.8	1385.0	1061.2	1624.3	1532.8	1918.8	False	True	1226.3140438616124	1559.8974209906717	1401.8986772441447	1515.3827088688665	1596.3449284023893	1652.6316484039519	1299.2011135421308	1567.1724483379958	1461.5404625619701	1571.286726447842	0.7804521117758701	0.9927516058874132	0.8921978742946378	0.9644215045936549	1.0159475680235621	1.0517696233201204	0.8268389795917092	0.9973815866699598	0.9301551638929886	1.0	10.61773075051388	-6.255205603742712	24.44061282903123	0.9613421528178148	0.7804520006201184	0.43701495877129215	0.06228390745762185	494.92079045492454	1940350.535883599	0.015313520692253326	0.13601303987208277	5.556411433007283e-07	6.255205603742712	-0.18089015219769633	
ITRKPVTVSPTTPTS(ph)PTEGEAS	ddPTM_K562_Methotrexat_30min_R1	1	ITRKPVTVSPTTPTSPTEGEAS	22	2	Q9Y6G9;E9PHI6	Q9Y6G9	DYNC1LI1	Cytoplasmic dynein 1 light intermediate chain 1	1	ITRKPVTVSPTTPT(0.061)S(0.331)PT(0.331)EGEAS(0.276)	87.24	0.0027616999999999997	13124000.0	2414.7	1818.8	3354.6	3827.0	1425.8	1595.9	1831.3	2150.7	1981.2	3575.7	True	False	2308.5526792801425	2119.3257856859877	2650.5153033214265	3491.4928518008146	1613.317691321327	1904.2850885832966	2242.0156419428026	2075.058661971635	1889.0944444335696	2928.1060807585736	0.7884115587376788	0.7237872287526351	0.9051978412731437	1.1924065438559133	0.550976517525407	0.650347028441661	0.7656879840097773	0.7086692232933232	0.645159154870567	1.0	11.515752105842804	-7.799965671573437	24.999996465271074	0.7043613354643894	0.8898872837106535	0.23641981697993297	0.1583573584796459	238.53313898372738	154784.5606174382	0.04977737355565006	0.05644326366079821	1.5850184739053034e-08	7.799965671573437	0.18552594824626412	
ITS(ph)PLMEPSSIEK	ddPTM_K562_Methotrexat_30min_R1	3	ITSPLMEPSSIEK	13	0	P28066	P28066	PSMA5	Proteasome subunit alpha type-5	1	IT(0.003)S(0.997)PLMEPSSIEK;IT(0.131)S(0.868)PLMEPS(0.002)SIEK;IT(0.115)S(0.882)PLMEPS(0.003)SIEK	151.66	6.0997e-10	112926000.0	14388.6	11019.900000000001	22457.3	16698.5	11355.6	11527.7	10518.300000000001	14188.7	13291.1	18864.7	True	False	13756.094372423177	12840.75116872719	17743.819627162793	15234.56843109378	12849.060440151825	13755.26487603339	12877.296525226328	13689.675378768286	12673.199662028579	15448.120027319479	0.890470448708062	0.8312177239702149	1.1486070535303614	0.9861762081180079	0.8317556063410108	0.8904167530876035	0.8335834070717513	0.8861709615512151	0.820371646492677	1.0	13.915143658307581	-7.754345006296275	24.99629851531194	0.8698533103660396	0.9678028054785874	0.181308452671317	0.08972525004902192	272.48632874339216	960073.0032108867	0.02736097120503923	0.03456716457587434	1.760576877271378e-08	7.754345006296275	0.0979494951125478	
ITVGNDHFCVS(ph)TPER	ddPTM_K562_Methotrexat_30min_R1	4	ITVGNDHFCVSTPER	15	0	Q5VUA4;Q5VUA4-2	Q5VUA4	ZNF318	Zinc finger protein 318	1	ITVGNDHFCVS(0.5)T(0.5)PER;ITVGNDHFCVS(0.653)T(0.347)PER;ITVGNDHFCVS(0.889)T(0.111)PER;ITVGNDHFCVS(0.597)T(0.403)PER	160.45	2.7676999999999994e-09	61729000.0	10441.099999999999	8795.0	13617.600000000002	11167.8	9425.4	8731.4	8875.1	11259.300000000001	11047.4	12899.7	True	False	9982.121745820135	10248.22426056095	10759.45185551478	10188.73631312807	10665.00530774304	10418.619476443513	10865.567096492425	10863.304037168005	10533.808785299521	10563.439329351277	0.9449689097076642	0.9701598069565772	1.0185557487530477	0.9645283127454458	1.0096148588755136	0.9862904638922504	1.028601268746029	1.0283870336608583	0.9971949908426676	1.0	13.366792014960136	-3.5255547792458533	0.4726809497377301	1.0109227623340276	1.672412132486755e-15	0.5040884321024116	0.01885160924314861	46.00120422590739	0.8762015627151195	0.011114479664409042	43.098808448233726	0.00029815714470466374	3.5255547792458533	-1.0109227623340258	
ITVNGDS(ph)SAEAEELANEI	ddPTM_K562_Methotrexat_30min_R1	1	ITVNGDSSAEAEELANEI	18	0	A0A0B4J1W3;Q9BXJ9	A0A0B4J1W3	NAA15	N-alpha-acetyltransferase 15, NatA auxiliary subunit	1	ITVNGDS(0.885)S(0.115)AEAEELANEI	180.39	9.222000000000001e-12	20834000.0	3571.8	3040.2	3609.5	3279.3	2846.5	2641.8	2511.7	4099.0	3819.1	3570.7	True	False	3414.7879487525593	3542.5413754357505	2851.915276736032	2991.8088604417053	3220.8646432502164	3152.290461193905	3075.012661971133	3954.835846664684	3641.5508745892594	2924.011629209564	1.1678434909903777	1.211534639618855	0.9753433427715124	1.0231863753737767	1.101522514847487	1.078070425474351	1.0516417346816054	1.3525376599592316	1.2453954827716143	1.0	11.51373333376694	-9.2324987014322	24.961641866829833	1.224224989624719	1.0852724873655142	0.1864290520320725	0.10360277906745931	891.1258420308798	768607.232364473	0.04860343234182232	0.028056320393300384	5.854654868965662e-10	9.2324987014322	-0.13895250225920486	
ITVNGDSS(ph)AEAEELANEI	ddPTM_K562_Methotrexat_30min_R1	2	ITVNGDSSAEAEELANEI	18	0	A0A0B4J1W3;Q9BXJ9	A0A0B4J1W3	NAA15	N-alpha-acetyltransferase 15, NatA auxiliary subunit	1	ITVNGDS(0.385)S(0.615)AEAEELANEI;ITVNGDS(0.001)S(0.999)AEAEELANEI	237.81	8.1109e-57	24073500.0	3989.3500000000004	3175.6200000000003	4251.79	3061.9500000000003	2828.0	3143.7200000000003	2733.1099999999997	3302.04	3815.86	4182.02	True	False	3813.9829507128125	3700.337228689324	3359.397383148218	2793.51359748406	3199.9315689835275	3751.19939763211	3346.079490607923	3185.9053815859115	3638.461501482069	3424.6156533976473	1.11369664123589	1.0805116845792977	0.9809560321945254	0.8157159460252262	0.9343914450104189	1.0953636195379912	0.977067160014933	0.9302957482031873	1.0624437512782667	1.0	11.741726367318703	-6.731297638784642	4.252645138912644	0.9687696868259738	1.1036038405663677	0.31782917097932506	0.07219540148312636	0.24045673599675504	9.586615075752258	0.020059314016552404	0.054351312458658325	1.8565316661297537e-07	6.731297638784642	0.13483415374039398	
ITVS(ph)KDQS(ph)S(ph)CTT(ph)ARGHTPMT	ddPTM_K562_Methotrexat_30min_R1	1	ITVSKDQSSCTTARGHTPMT	20	2	P35348-3	P35348-3			4	IT(0.132)VS(0.883)KDQS(0.961)S(0.833)CT(0.39)T(0.407)ARGHT(0.09)PMT(0.304)	40.669000000000004	0.033629	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
IVAHAVEVPAVQS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	IVAHAVEVPAVQSPR	15	0	Q96FF9;B5MBX0;H0YCL8	Q96FF9	CDCA5	Sororin	1	IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR	149.19	2.9410999999999997e-09	178753000.0	12181.599999999999	7512.089999999999	10805.4	10105.5	8400.8	7324.23	7439.799999999999	10532.5	10138.2	12885.4	True	False	11646.111449835997	8753.335188802428	8537.494204527917	9219.566504800918	9505.652448626875	8739.533789306623	9108.36453498939	10162.066005122171	9666.87729484979	10551.729197921117	1.1037159153146665	0.8295640481871914	0.8091085398789384	0.8737493477957471	0.90086205496059	0.8282560730452095	0.8632106040765247	0.9630711530318921	0.9161415265238555	1.0	13.365191824059208	-9.797402473405077	1.2664508648577062	0.9912450339871963	0.881053145433121	0.133454348828706	0.08082247441432767	0.784631649104381	2.6341167651912376	0.07536793687910186	0.0239400683918181	1.5944008844115126e-10	9.797402473405077	-0.11019188855407536	
IVAHAVEVPAVQS(ph)PRRS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	IVAHAVEVPAVQSPRRSPR	19	2	Q96FF9;B5MBX0;H0YCL8	Q96FF9	CDCA5	Sororin	2	IVAHAVEVPAVQS(1)PRRS(1)PR;IVAHAVEVPAVQS(1)PRRS(1)PR	86.54799999999999	0.0037324	44472000.0	4146.1	3277.2	4193.2	4256.4	2854.7	2707.7	2748.9	3725.6	3574.0	4286.9	True	False	3963.842408399963	3818.701597124544	3313.1046234684914	3883.2480204873214	3230.1430869792357	3230.9247035259064	3365.4108000527344	3594.568536309817	3407.8455200916496	3510.5008690896693	1.129138705904338	1.0877939472251994	0.9437697773103341	1.1061806178940818	0.9201373842180147	0.9203600352230473	0.9586696957364493	1.0239474850897694	0.9707576346435601	1.0	11.777461169835773	-6.19245402730535	0.9103599491522277	0.973433988529548	1.2444612364455818	0.4566866283751758	0.05432015591938256	2.183002240647163	1.315246785889328	0.019069335776003848	0.6063199087612482	6.420161792023426e-07	6.19245402730535	0.27102724791603383	
IVAHAVEVPAVQSPRRS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	IVAHAVEVPAVQSPRRSPR	19	2	Q96FF9;B5MBX0;H0YCL8	Q96FF9	CDCA5	Sororin	1	IVAHAVEVPAVQS(0.236)PRRS(0.764)PR;IVAHAVEVPAVQS(0.203)PRRS(0.797)PR	78.902	0.0046055	54648000.0	3578.3	3063.0	4242.8	6123.9	3360.1	3420.2	4004.0	3903.8999999999996	4058.2	5741.9	True	False	3421.00221653544	3569.108687902014	3352.2942612925967	5587.02719496812	3802.012045594605	4081.1052446723456	4901.998924446556	3766.597624248416	3869.535167777261	4701.9862698514025	0.7275653352011073	0.7590640386992897	0.7129527967333983	1.1882270330714273	0.8085970114316732	0.8679534584862413	1.0425379069857375	0.8010652111851982	0.8229575642507247	1.0	12.199054610882666														
IVDQIRPDR	ddPTM_K562_Methotrexat_30min_R1	3	IVDQIRPDR	9	1	J3KTA4;P17844-2;P17844;J3QSF1;J3KRZ1;A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2	J3KTA4;A0A1X7SBZ2	DDX5;DDX17	Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17	0	;;	115.49	0.012654	38017000.0	8572.7	7181.8	9646.6	9593.8	7460.6	7372.0	7101.4	8603.9	8264.3	9510.2	False	True	8195.854372661146	8368.470380272507	7621.910488588945	8752.726449335414	8441.799668867923	8796.534665728477	8694.069720795396	8301.295960263054	7880.094496836436	7787.810624277817	1.0523951811451717	1.074560076510404	0.9786974614955719	1.1239007818255822	1.0839759819725654	1.129526010597388	1.1163689180746634	1.0659344918306684	1.011849783849511	1.0	12.92700208721836	-5.916947772771116	20.95477580232125	1.0699941054892241	0.08455098257941451	0.0	0.05044644317849206	4015.274485745828	1406040.9646046835	0.012400185848240338	72729.4492932678	1.210743725977535e-06	5.916947772771116	-0.9854431229098096	
IVEPEVVGES(ph)DS(ph)EVEGDAWR	ddPTM_K562_Methotrexat_30min_R1	2	IVEPEVVGESDSEVEGDAWR	20	0	P55081	P55081	MFAP1	Microfibrillar-associated protein 1	2	IVEPEVVGES(1)DS(1)EVEGDAWR;IVEPEVVGES(1)DS(1)EVEGDAWR	87.46799999999999	0.0033758000000000004	8800900.0	3716.5	3474.3	4376.7	4039.4	3177.4	3539.3	3196.1	3907.0	4285.0	4513.4	True	False	3553.1271100114495	4048.3690219973764	3458.0904811443647	3685.272073573085	3595.2837932419584	4223.21963407661	3912.9067838220876	3769.5885954913188	4085.7912852805575	3695.979524259795	0.9613492408952251	1.0953440070283278	0.9356357248318162	0.9971029464269409	0.9727553330972516	1.142652335153942	1.0586927655140992	1.0199159845849701	1.1054691343558867	1.0	11.851741048902346	-8.226717379704782	24.984995350751102	1.0661750062173927	0.9952580191028378	0.312070231641966	0.05403649967654904	782.7911792137199	563275.7277539334	0.017312892139511097	0.017312269205868935	5.933113006254625e-09	8.226717379704782	-0.07091698711455485	
IVEPEVVGES(ph)DSEVEGDAWR	ddPTM_K562_Methotrexat_30min_R1	5	IVEPEVVGESDSEVEGDAWR	20	0	P55081	P55081	MFAP1	Microfibrillar-associated protein 1	1	IVEPEVVGES(0.781)DS(0.219)EVEGDAWR;IVEPEVVGES(0.975)DS(0.025)EVEGDAWR;IVEPEVVGES(0.964)DS(0.036)EVEGDAWR;IVEPEVVGES(0.864)DS(0.136)EVEGDAWR;IVEPEVVGES(1)DSEVEGDAWR	198.98	2.9115e-17	338288400.0	13586.800000000001	14493.7	25132.499999999996	15991.400000000001	15582.3	14886.199999999999	13296.7	16548.0	14537.2	16041.9	True	False	12989.54054037496	16888.537574223123	19857.53170593388	14589.45879025021	17631.645575449787	17762.747468932073	16278.823451220918	15965.997460504319	13861.368745012958	13136.556460810749	0.9888086409193786	1.2856137469971953	1.5116238235776085	1.1105999379497808	1.3421816918344531	1.3521616202786686	1.2392002043902637	1.2153868107014512	1.0551752117356237	1.0	13.681299525225477	-9.751006188397794	2.0865513045946495	0.9976952301602547	1.2727958853310621	0.32755508705616676	0.13276712218389258	0.35148514044389406	2.9131043383367796	0.12344496073182994	0.035880911470258806	1.7741642000899194e-10	9.751006188397794	0.2751006551708074	
IVEPEVVGESDS(ph)EVEGDAWR	ddPTM_K562_Methotrexat_30min_R1	1	IVEPEVVGESDSEVEGDAWR	20	0	P55081	P55081	MFAP1	Microfibrillar-associated protein 1	1	IVEPEVVGES(0.03)DS(0.97)EVEGDAWR	215.51	3.7888e-29	13968000.0	1510.5	1546.2	2815.2	1641.5	1652.6	1647.1	1467.1	1589.8	1260.6	1854.3	True	False	1444.1002286216305	1801.6832690937292	2224.327991984284	1497.5922435931636	1869.94586665565	1965.3787639611178	1796.1345209928945	1533.8858328927815	1201.9949811492822	1518.4683014656214	0.9510242836335727	1.18651358566705	1.4648498028160144	0.9862518974862312	1.231468490221879	1.294316622918068	1.1828594111969744	1.0101533442695374	0.7915838480059939	1.0	10.568401076739619	-9.404833031377537	3.3101890482078646	0.8957723539580623	1.1947343491057918	0.39860745338701964	0.1450514469985209	0.24761986921674223	4.986077332628069	0.09490178284510227	0.03905753625772859	3.9370140859456003e-10	9.404833031377537	0.2989619951477295	
IVEYS(ph)PPSAPR	ddPTM_K562_Methotrexat_30min_R1	1	IVEYSPPSAPR	11	0	O95696;O95696-2	O95696	BRD1	Bromodomain-containing protein 1	1	IVEYS(0.919)PPS(0.081)APR	98.182	0.0088755	27465000.0	1674.2	1372.5	1972.3	1541.7	1521.8	1356.8	1134.3	1460.6	1682.7	1724.8	True	False	1600.6041726304768	1599.2822964889037	1558.341183074242	1406.5415546436661	1721.943374002521	1618.9823975122617	1388.6956493505816	1409.2298701240397	1604.4716442804202	1412.4220063462794	1.1332336691432583	1.1322977759501238	1.1033113163575192	0.9958366184637514	1.219142272115206	1.146245520275008	0.9832016515679515	0.997739955758338	1.1359718533633896	1.0	10.4639554890649	-8.753809394042827	24.94791075941058	1.0290400253567242	1.120035891455513	0.32849934694826766	0.06472814640136246	213.0629136357716	696658.6040635399	0.025701619267272633	0.01952428506942796	1.7627495235201799e-09	8.753809394042827	0.09099586609878885	
IVMS(ph)IGVDDDDS(ph)FFYLGT(ph)TT(ph)GDILKMNPR	ddPTM_K562_Methotrexat_30min_R1	1	IVMSIGVDDDDSFFYLGTTTGDILKMNPR	29	1	Q8N1V2-3;Q8N1V2;Q8N1V2-2	Q8N1V2-3	CFAP52	Cilia- and flagella-associated protein 52	4	IVMS(0.991)IGVDDDDS(0.889)FFY(0.212)LGT(0.622)T(0.625)T(0.662)GDILKMNPR	40.404	0.019443000000000002	56020000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
IVNHWAS(ph)PELR	ddPTM_K562_Methotrexat_30min_R1	4	IVNHWASPELR	11	0	F1T0I1;O15027-2;O15027-4;O15027-3;O15027;O15027-5;A0A3F2YNX0;A0A3F2YNZ0	F1T0I1	SEC16A	Protein transport protein Sec16A	1	IVNHWAS(1)PELR;IVNHWAS(1)PELR;IVNHWAS(1)PELR;IVNHWAS(1)PELR	142.76	1.5319e-05	69154000.0	20695.4	15901.0	18902.5	20358.800000000003	16646.6	15147.8	15941.5	20938.1	21351.6	23579.1	True	False	19785.65499597226	18528.36997921316	14935.12356794648	18573.97561307614	18835.919680424748	18074.897966565622	19516.787176339858	20201.69515517194	20358.96877638188	19308.69650384945	1.024701744730812	0.9595867838887663	0.7734920669020284	0.9619487058265777	0.9755148244558898	0.9361014071023462	1.0107770440355166	1.0462485207711696	1.0543937428569061	1.0	14.236963153319783	-8.83472631078042	2.387835624690902	1.0384315664639208	0.9328266649621914	0.3284593040927841	0.06255798460269944	0.35460232972005284	4.113959964428435	0.03262317557818469	0.020434649297377826	1.4630989182708114e-09	8.83472631078042	-0.10560490150172941	
IVNKT(ph)T(ph)T(ph)LVNDSDCPQAS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	IVNKTTTLVNDSDCPQASR	19	1	Q8TE56	Q8TE56	ADAMTS17	A disintegrin and metalloproteinase with thrombospondin motifs 17	4	IVNKT(1)T(1)T(1)LVNDS(0.14)DCPQAS(0.861)R	50.364	0.027174	18886000.0	208.51	127.89	207.25	204.53	141.16	206.58	188.27	204.74	378.95	231.52	True	False	199.34415006282453	149.02164874168741	163.75105723882604	186.59917245331073	159.7250142424734	246.49866131934183	230.49434003635213	197.53917815226333	361.33269721285126	189.58948452533068	1.0514515114691951	0.7860227539242923	0.8637138164535048	0.9842274370885775	0.8424782347099681	1.300170533911693	1.2157548748731168	1.041931089410555	1.905868873041713	1.0	7.566735137956755	-8.265899083482102	24.568338501933543	1.2905539034757325	0.9009802862710393	0.39319400433115315	0.24044395798704865	311.9463333096507	1718493.1180019097	0.0797928512202146	0.0727872947177852	5.421268491698106e-09	8.265899083482102	-0.3895736172046932	
IVQISGNS(ph)MPR	ddPTM_K562_Methotrexat_30min_R1	1	IVQISGNSMPR	11	0	H0YKH2;H7C3F4;Q9NWH9-3;Q9NWH9	H0YKH2	SLTM	SAFB-like transcription modulator	1	IVQIS(0.356)GNS(0.644)MPR	77.185	0.030955	12437000.0	3344.3	2421.4	2833.3	2926.1	2244.8	2505.1	2274.5	3042.4	3485.5	3556.8	True	False	3197.288576351754	2821.4951932373297	2238.629049335421	2669.5733560633284	2540.0305466952695	2989.175120878512	2784.614523889536	2935.397067551263	3323.4598657748843	2912.62905390332	1.097732844512744	0.9687107904990997	0.768593943102831	0.9165510975335964	0.872074850483031	1.0262807468986173	0.956048460808208	1.0078169973678697	1.1410515394402851	1.0	11.508106259339383	-9.03047869786059	1.2689749079151775	1.0623668141780935	0.9240663234519361	0.23927383835021976	0.08893741546118689	0.6786269811385134	2.051780791621908	0.07025570669867193	0.03189440570471861	9.32226194904489e-10	9.03047869786059	-0.13830049072615747	
IVRGDQPAASGDS(ph)DDDEPPPLPR	ddPTM_K562_Methotrexat_30min_R1	2	IVRGDQPAASGDSDDDEPPPLPR	23	1	O00264-2;O00264	O00264-2	PGRMC1	Membrane-associated progesterone receptor component 1	1	IVRGDQPAAS(0.034)GDS(0.966)DDDEPPPLPR;IVRGDQPAAS(0.004)GDS(0.996)DDDEPPPLPR	136.22	1.9405e-13	69218000.0	1504.37	1025.59	1692.83	2434.8	1339.24	1514.04	1474.72	1704.55	2330.3	2941.3	True	False	1438.2396960817766	1195.0513154506784	1337.5281168907213	2221.3448642708713	1515.3735341037827	1806.6068021296164	1805.4634999649923	1644.6000103518631	2221.964861631105	2408.602068220263	0.597126322798728	0.4961597148896049	0.5553130317948421	0.9222548189175318	0.6291506405719836	0.7500644568758233	0.7495897823001808	0.6828027062050447	0.9225122285446405	1.0	11.233980346305524	-6.6545581258814375	0.10289083509640402	1.20726549148788	1.1070531361689553e-15	0.5800469321338622	0.10508551831280928	36.21100143763633	0.6946923289611534	2.017730728812297	7.0858380268415395	2.2153475748201008e-07	6.6545581258814375	-1.2072654914878789	
IVSAQS(ph)LAEDDVE	ddPTM_K562_Methotrexat_30min_R1	1	IVSAQSLAEDDVE	13	0	Q15388	Q15388	TOMM20	Mitochondrial import receptor subunit TOM20 homolog	1	IVS(0.018)AQS(0.982)LAEDDVE	88.76799999999999	0.026056	0.0	2162.6	1753.0	1729.3	2577.8	1374.4	1704.3	1664.1	1875.3	2060.1	2130.0	True	False	2067.5346934241243	2042.6534540947544	1366.3435622827599	2351.808276292693	1555.1576903857704	2033.6318544222784	2037.316785757123	1809.3446360698415	1964.3264006549548	1744.2363598779998	1.185352364497629	1.1710875321035201	0.7833477123354592	1.3483311840014558	0.8915980231569909	1.1659152974912874	1.1680279305148888	1.0373276682504173	1.1261813168442085	1.0	10.768379836312956	-13.076905620368626	2.4813284771324176	0.8540865838178998	1.0940336012283134	0.035212145002041284	0.15209889809623806	13552046.730459187	7062021.607168606	11145454.774119616	0.03512075235181288	8.377113113669985e-14	13.076905620368626	0.23994701741041358	
IWDMT(ph)PVVGCS(ph)LAT(ph)GFS(ph)PH	ddPTM_K562_Methotrexat_30min_R1	1	IWDMTPVVGCSLATGFSPH	19	0	Q8IWB7	Q8IWB7	WDFY1	WD repeat and FYVE domain-containing protein 1	4	IWDMT(1)PVVGCS(1)LAT(1)GFS(1)PH	56.247	0.016826	6725800.0	0.0	0.0	76.37	140.2	0.0	0.0	0.0	149.74	0.0	147.38	True	False	0.0	0.0	60.340980657800465	127.90888367454245	0.0	0.0	0.0	144.47355932656006	0.0	120.68805385860071	0.0	0.0	0.4999747591298186	1.0598305265938064	0.0	0.0	0.0	1.1970825173453097	0.0	1.0	6.91513906974587	-15.999999990542642	0.16733092464848706	3.622291654975494	0.157565344568571	0.18721424696671085	0.44118709289907115	242.4290652714602	2.270564805185329	210.47182141555578	1.7278435421305958	1.0000000217763708e-16	15.999999990542642	-3.464726310406923	
IWDPTPSHT(ph)PAGAATPGRGDTPGHATPGHGGATSSAR	ddPTM_K562_Methotrexat_30min_R1	1	IWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSAR	37	1	O75533	O75533	SF3B1	Splicing factor 3B subunit 1	1	IWDPT(0.005)PS(0.033)HT(0.697)PAGAAT(0.259)PGRGDT(0.006)PGHATPGHGGATSSAR	68.694	1.7715999999999998e-05	20660000.0	997.74	777.03	1168.6	1016.2	771.42	807.04	716.55	1063.2	921.1	1076.4	True	False	953.8805442601432	905.4210002482869	923.3268298638945	927.1113237522823	872.8752513950744	962.989058142906	877.2545777502955	1025.8066533725034	878.2782620471236	881.4535294707412	1.0821677063711912	1.027190850085922	1.0475048303661518	1.0517982999159987	0.9902680313948967	1.0925012220679653	0.9952363322851894	1.1637671403828147	0.9963976916338129	1.0	9.78374070195281														
IWDPTPSHTPAGAAT(ph)PGRGDT(ph)PGHATPGHGGATSSAR	ddPTM_K562_Methotrexat_30min_R1	3	IWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSAR	37	1	O75533	O75533	SF3B1	Splicing factor 3B subunit 1	2	IWDPT(0.006)PS(0.014)HT(0.278)PAGAAT(0.787)PGRGDT(0.915)PGHAT(0.002)PGHGGATSSAR;IWDPT(0.029)PS(0.113)HT(0.414)PAGAAT(0.447)PGRGDT(0.975)PGHAT(0.021)PGHGGATSSAR;IWDPT(0.035)PS(0.283)HT(0.343)PAGAAT(0.752)PGRGDT(0.571)PGHAT(0.014)PGHGGATSS(0.001)AR	73.868	3.3724e-08	160448000.0	4676.1	4675.5	5511.4	4404.7	4315.0	3966.9700000000003	4341.2	5189.5	4970.4	5214.0	True	False	4470.5442430040475	5448.04690508843	4354.632457737348	4018.5467897379244	4882.4981330141145	4733.530808858503	5314.824608093758	5006.982343563401	4739.327188881797	4269.69407530699	1.0470408802491584	1.2759806227327228	1.0198933181001382	0.9411790912558511	1.1435241136481338	1.1086346528277118	1.2447787861034572	1.1726794133847633	1.1099922161381177	1.0	12.059916988735312	-7.91487096365139	24.999349527981305	1.1432939220832206	1.0770537704274417	0.06883986762430416	0.098085947623037	64.70912477547378	18993.57918329744	0.03144469206107335	0.03565492853699486	1.2165474040793585e-08	7.91487096365139	-0.0662401516557789	
IWDPTPSHTPAGAAT(ph)PGRGDTPGHATPGHGGATSSAR	ddPTM_K562_Methotrexat_30min_R1	4	IWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSAR	37	1	O75533	O75533	SF3B1	Splicing factor 3B subunit 1	1	IWDPT(0.053)PS(0.071)HT(0.188)PAGAAT(0.609)PGRGDT(0.077)PGHAT(0.002)PGHGGATSSAR;IWDPTPS(0.004)HT(0.459)PAGAAT(0.537)PGRGDTPGHATPGHGGATSSAR;IWDPT(0.014)PS(0.049)HT(0.141)PAGAAT(0.693)PGRGDT(0.085)PGHAT(0.018)PGHGGATSSAR;IWDPT(0.003)PS(0.01)HT(0.163)PAGAAT(0.781)PGRGDT(0.039)PGHAT(0.004)PGHGGATSSAR	82.91	3.5103e-09	324469000.0	8766.73	7501.8099999999995	11494.0	9540.41	7712.54	7555.82	7621.64	9803.499999999998	8845.61	10349.73	True	False	8381.355046186103	8741.356593532553	9081.566474803698	8704.01706774209	8726.874194854383	9015.875279165017	9330.986783845872	9458.705348323307	8434.379521818102	8475.293606065788	0.9889161881291696	1.0313927752634249	1.071534143466605	1.0269870841421473	1.0296839968598301	1.0637832384605923	1.1009632488917742	1.1160327639332386	0.995172546681049	1.0	13.049047632460093	-8.26961069272735	12.253995586885695	1.0653069996241342	1.0319685277729302	0.06185830852500673	0.04059549566428336	1.4485416031319922	2154.5632412228856	0.013995575091175525	0.012794427283396548	5.375134145519507e-09	8.26961069272735	-0.03333847185120398	
IWYEHR	ddPTM_K562_Methotrexat_30min_R1	2	IWYEHR	6	0	H0YL11;P48735-2;O75874;P48735	H0YL11	IDH2;IDH1	Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] cytoplasmic	0	;	116.0	4.5904e-08	7251300.0	3660.2	3237.2	3410.1000000000004	3428.3	3213.0	2659.7	2831.9	3811.6000000000004	4027.2000000000003	3755.7	False	True	3499.30199059973	3772.0922770082916	2694.3666117738017	3127.746261779129	3635.5658172362364	3173.649382859199	3467.0256628721822	3677.543867564554	3839.9763510109356	3075.5063365229125	1.1377970349285476	1.226494718028421	0.8760725282133486	1.016985796659186	1.1821031789342735	1.031911183264621	1.1273023962590534	1.1957523299146537	1.248567205149157	1.0	11.5866082330181	-8.986368407142772	7.7076128658461505	1.1657537286490103	1.0779932178373548	0.07303524214892199	0.1087751620823024	0.3389766754891597	116.60007139212408	0.04777111438091177	0.03127432480150802	1.0318856973122254e-09	8.986368407142772	-0.08776051081165548	
IY(ph)LTADNLVLNLQDES(ph)FT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	IYLTADNLVLNLQDESFTR	19	0	J3KPX7;Q99623-2;Q99623	J3KPX7	PHB2	Prohibitin-2	3	IY(0.767)LT(0.233)ADNLVLNLQDES(1)FT(1)R	55.228	0.024749	0.0	1892.7	1816.7	2095.3	1979.0	1206.0	1707.1	1662.6	2294.9	1722.2	2285.5	True	False	1809.4991742549903	2116.878796379884	1655.5251639686962	1805.504142595716	1364.6101386825076	2036.972914794503	2035.4803725736383	2214.187066238297	1642.1352979020257	1871.573803052192	0.9668329249447875	1.1310688325128535	0.8845631207643747	0.9646983408569149	0.7291244066662399	1.0883743464845337	1.0875768667279617	1.183061583052384	0.8774087857096555	1.0	10.87003622480379														
IY(ph)PIMDKS(ph)S(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	IYPIMDKSSR	10	1	H0YEC7	H0YEC7	CASP1		3	IY(1)PIMDKS(1)S(1)R	73.273	0.029352	10112000.0	4940.4	4955.9	5097.9	5022.2	5797.8	4926.4	4791.8	5660.9	5439.3	5403.8	True	False	4723.225931467929	5774.778239103357	4027.9204569255066	4581.911523468523	6560.312323427401	5878.357077759736	5866.483128412343	5461.8029383713365	5186.428130227895	4425.119456107387	1.0673668763786943	1.3049994008937364	0.9102399374476363	1.0354322790415833	1.4825164356575955	1.328406416158245	1.3257231102124574	1.234272428698655	1.172042513580007	1.0	12.111500685938529	-6.228425465953745	21.535133765398268	1.209296487290785	1.0673651715584467	0.050594611558044233	0.16644242026498685	6948.548081046597	4532069.041192616	0.04381436910996153	4.665780313861459	5.909823818497504e-07	6.228425465953745	-0.1419313157323383	
IYHLPDAES(ph)DEDEDFKEQTR	ddPTM_K562_Methotrexat_30min_R1	7	IYHLPDAESDEDEDFKEQTR	20	1	B5MCX3;Q15019;Q15019-3;Q15019-2;H7C2Y0	B5MCX3	SEPT2	Septin-2	1	IYHLPDAES(0.996)DEDEDFKEQT(0.004)R;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR	140.47	8.8148e-10	1995740000.0	27839.9	20074.4	42000.9	29591.699999999997	20516.0	20300.07	17651.29	28122.0	26169.699999999997	36167.0	True	False	26616.09133055503	23391.353393542326	33185.485066259156	26997.441605078166	23214.213602993637	24222.77122513762	21610.04110766591	27132.93332029867	24953.076359021383	29616.805834604496	0.8986820347607031	0.7898000049084191	1.120495074708056	0.9115581793609273	0.7838189483576915	0.8178725065900103	0.729654684179905	0.9161330047481471	0.8425309771206327	1.0	14.854128434252377	-7.584484803036321	8.295511978588657	0.837333832831696	0.9371750011741237	0.13136886512577384	0.1021518680474843	0.4787210987843735	57.70839656499057	0.03017376260694416	0.03901505355580833	2.6032459233480137e-08	7.584484803036321	0.09984116834242762	
IYNISGNGS(ph)PLADSK	ddPTM_K562_Methotrexat_30min_R1	2	IYNISGNGSPLADSK	15	0	Q53HL2	Q53HL2	CDCA8	Borealin	1	IYNIS(0.002)GNGS(0.997)PLADSK;IYNIS(0.013)GNGS(0.674)PLADS(0.314)K	216.34	6.067699999999999e-27	27563000.0	3568.2	2673.7	4422.2	3245.9	3081.3	2578.4	2116.01	4155.1	3944.0	4847.2	True	False	3411.3462004420426	3115.483479870589	3494.0406529386564	2961.336986584859	3486.544958807972	3076.6393084799647	2590.579106922617	4008.962777866901	3760.644300850998	3969.325109671661	0.859427259341885	0.7848899734313521	0.8802606378663904	0.7460555396103138	0.8783722326782086	0.7751038837769733	0.6526497667350074	1.0099859968886546	0.9474266271835001	1.0	11.954678016539335	-9.288930763079065	24.931248991257952	0.9840297807224406	0.799806149026555	0.63117911840051	0.06621603695478424	484.18844781458563	439095.4131881223	0.03581051940527092	0.017208844886542174	5.141256089599834e-10	9.288930763079065	-0.18422363169588563	
IYQY(ph)IQSR	ddPTM_K562_Methotrexat_30min_R1	6	IYQYIQSR	8	0	A0A2R8Y443;A0A2R8YDF3;A0A2R8Y6L5;A0A2R8Y6I6;Q13627-4;Q13627-3;Q13627-5;Q9Y463-2;Q9Y463-3;Q9Y463;Q13627-2;Q13627	A0A2R8Y443	DYRK1A;DYRK1B	Dual specificity tyrosine-phosphorylation-regulated kinase 1A;Dual specificity tyrosine-phosphorylation-regulated kinase 1B	1	IYQY(0.982)IQS(0.018)R;IYQY(1)IQSR;IYQY(1)IQSR;IY(0.001)QY(0.871)IQS(0.128)R;IY(0.037)QY(0.963)IQSR;IYQY(1)IQSR	186.3	3.832e-13	2378044000.0	9387.8	8585.5	11262.2	10298.6	8774.31	8656.83	8674.150000000001	9730.099999999999	10252.6	10768.8	True	False	8975.123552634323	10004.10794645209	8898.418127069272	9395.737727608011	9928.285560483675	10329.639879316092	10619.548943678346	9387.886867926814	9775.95886381971	8818.465968194463	1.0177647206447102	1.13444991255099	1.0090664475162883	1.0654616983833234	1.1258517747068475	1.1713647154246527	1.2042399417290768	1.0645714233956427	1.1085781698402686	1.0	13.106311995709895	-7.735320468325428	6.148585714494108	1.1232944953178585	1.0583187032060002	0.15238150626657998	0.06134262996981591	0.28812792415864047	34.010758767344015	0.018297678346793654	0.023033546255858163	1.8394141865523873e-08	7.735320468325428	-0.06497579211185833	
IYT(ph)EMRFT(ph)VRDCSSLPNVPGS(ph)CK	ddPTM_K562_Methotrexat_30min_R1	1	IYTEMRFTVRDCSSLPNVPGSCK	23	2	C9J466;C9JB88;C9J6S4;F8WDG5;A0A3B3IRY8;P54762-6;P54762	C9J466	EPHB1	Ephrin type-B receptor 1	3	IY(0.144)T(0.877)EMRFT(0.977)VRDCS(0.119)S(0.12)LPNVPGS(0.763)CK	50.883	0.026060000000000003	23910000.0	1594.5	1813.5	1660.2	1699.2	2310.9	2133.2	1535.7	2016.2	1951.7	1813.6	True	False	1524.407689200392	2113.150050770585	1311.7467079753878	1550.2337741781919	2614.8238552913836	2545.4107092962527	1880.119817250893	1945.2891032069615	1860.965892994649	1485.1394658566844	1.0264407648214078	1.4228630370088782	0.8832481649921834	1.043830434661541	1.7606587902389723	1.7139203204918967	1.2659550570668925	1.3098359769766441	1.2530580028194012	1.0	10.536382702053178	-6.245379107804319	22.607888497053388	1.3105486800954353	1.0264399426571627	0.07864186121248717	0.2708101646504568	2255.4741239288674	3174808.9585236735	0.07246205716614962	1.5658750749065447	5.683565798754921e-07	6.245379107804319	-0.2841087374382727	
KAAS(ph)LTEDRDR	ddPTM_K562_Methotrexat_30min_R1	3	KAASLTEDRDR	11	2	Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6	Q04637-9	EIF4G1	Eukaryotic translation initiation factor 4 gamma 1	1	KAAS(0.681)LT(0.319)EDRDR;KAAS(0.88)LT(0.12)EDRDR;KAAS(0.5)LT(0.5)EDRDR	116.9	0.008276500000000001	491277000.0	15800.900000000001	11477.1	20326.1	15816.3	11338.8	11242.5	11106.7	14273.1	14458.599999999999	18103.6	True	False	15106.31135546344	13373.495697655952	16059.929382591554	14429.70953538992	12830.050945682613	13414.954012405358	13597.66020333432	13771.106982929901	13786.422841857053	14824.862612529263	1.0189849140791571	0.902099132193867	1.0833105036007868	0.9733452452500047	0.8654414736254803	0.9048956717526463	0.9172199809691477	0.9289197035317698	0.9299528233202936	1.0	13.855731114395525	-7.537307290545448	23.924885218797595	0.9195050160286945	0.9976615418063438	0.3128622027907467	0.051712050237613265	158.04697660262698	262065.57585404807	0.014744437347021296	0.019045139881431597	2.9019686033305025e-08	7.537307290545448	0.07815652577764931	
KAAS(ph)PSPQS(ph)VR	ddPTM_K562_Methotrexat_30min_R1	1	KAASPSPQSVR	11	1	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2	A9Z1X7	SRRM1	Serine/arginine repetitive matrix protein 1	2	KAAS(0.921)PS(0.111)PQS(0.968)VR	113.43	0.0059697	8648700.0	5925.8	4553.4	9260.1	6997.4	4827.0	4846.2	4364.4	5850.0	5337.3	7331.2	True	False	5665.308927352575	5305.771955433571	7316.531556753933	6383.948806164361	5461.835107313818	5782.659562812441	5343.227798664973	5644.252184188438	5089.170087964513	6003.448639219528	0.9436757550222147	0.8837873486202328	1.218721437701033	1.063380265212746	0.9097829323686658	0.9632229590564483	0.8900264031174612	0.9401683138114119	0.8477077749475218	1.0	12.551575769617068	-7.767941006630619	24.982909070683124	0.9223071279679464	1.03080023212027	0.23719625764281782	0.08965075786326991	229.57577595900642	882157.8455604776	0.02897892642838078	0.03364306239801021	1.7063141542889274e-08	7.767941006630619	0.1084931041523236	
KAAS(ph)PSPQSVR	ddPTM_K562_Methotrexat_30min_R1	2	KAASPSPQSVR	11	1	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2	A9Z1X7	SRRM1	Serine/arginine repetitive matrix protein 1	1	KAAS(0.936)PS(0.063)PQS(0.001)VR;KAAS(0.966)PS(0.019)PQS(0.015)VR	98.0	0.007350499999999999	26613000.0	2545.9	1865.1	2817.1	2657.7	1766.97	1444.8600000000001	1364.19	1585.46	2026.6999999999998	2796.8	True	False	2433.985284374584	2173.2760737205504	2225.8292079493203	2424.7035673454443	1999.3575263249013	1724.0587462187261	1670.1443338513373	1529.6984731527168	1932.4791593647858	2290.272418453891	1.0627492453573317	0.9489159700869462	0.9718622073141523	1.0586965759218743	0.8729780397366966	0.7527745312422692	0.7292339201197787	0.6679111449044914	0.8437769864378653	1.0	11.16130349581299	-7.978210832044188	3.908529057479659	0.7755023495223292	1.0026320286058954	0.5456451859791425	0.08967556010716145	0.15226731393679255	5.185263627009359	0.028364900415469577	0.031215998223730664	1.0514513136942482e-08	7.978210832044188	0.22712967908356618	
KAEAGAGS(ph)ATEFQFR	ddPTM_K562_Methotrexat_30min_R1	2	KAEAGAGSATEFQFR	15	1	P46783;Q9NQ39	P46783	RPS10;RPS10P5	40S ribosomal protein S10;Putative 40S ribosomal protein S10-like	1	KAEAGAGS(0.868)AT(0.132)EFQFR;KAEAGAGS(0.55)AT(0.45)EFQFR	99.238	0.0028526	31250000.0	5525.7	4104.17	7294.8	6231.6	4342.96	3908.2000000000003	4042.54	5336.889999999999	5528.21	6583.7	True	False	5282.796844286362	4782.314333537975	5763.7211693403515	5685.285303183157	4914.135363095014	4663.4043381172005	4949.182500507541	5149.188553721951	5271.204723734153	5391.328132642624	0.9798692853252351	0.887038261422583	1.0690725972405606	1.0545240733467371	0.9114888283912135	0.864982472478702	0.9179894784259105	0.9550872117290354	0.9777191434182673	1.0	12.396425003715393	-7.787174836325407	24.997854034040635	0.9309930186442507	0.9948302990678247	0.19835029766781243	0.05775028717634818	372.6631503068937	361980.01752377907	0.01922014098690242	0.02180086299414494	1.632394653476978e-08	7.787174836325407	0.06383728042357406	
KAEAGAGSAT(ph)EFQFR	ddPTM_K562_Methotrexat_30min_R1	1	KAEAGAGSATEFQFR	15	1	P46783;Q9NQ39	P46783	RPS10;RPS10P5	40S ribosomal protein S10;Putative 40S ribosomal protein S10-like	1	KAEAGAGS(0.456)AT(0.544)EFQFR	104.16	0.0086414	12463000.0	1044.1	862.07	1425.5	1280.6	1052.3	629.59	768.25	1047.8	742.5	1217.5	True	False	998.2026141700396	1004.5124148154392	1126.3070306101154	1168.3317862597655	1190.6958946398033	751.2493570531728	940.5496188077092	1010.948280101306	707.9813370643675	996.9989521837865	1.0012072851065859	1.0075360787643712	1.1296973062440012	1.1718485598211497	1.1942799859836872	0.7535106786297683	0.943380749545992	1.0139913165274301	0.7101124183868334	1.0	9.96144817816946	-8.254436601941878	24.993250405827553	0.8887723460744649	1.101266088536875	0.50608421667324	0.10699881290580016	494.8972910255877	1766313.4527621865	0.036340663996680775	0.03558959177653712	5.566258842534201e-09	8.254436601941878	0.21249374246241015	
KAEDS(ph)DS(ph)EPEPEDNVR	ddPTM_K562_Methotrexat_30min_R1	3	KAEDSDSEPEPEDNVR	16	1	Q9H0D6-2;Q9H0D6	Q9H0D6-2	XRN2	5-3 exoribonuclease 2	2	KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR	145.33	6.2934e-09	65701000.0	11098.1	7745.1	17357.2	12601.599999999999	7928.5	7547.099999999999	7327.1	10238.300000000001	11282.0	14525.6	True	False	10610.240812489727	9024.846130809628	13714.160920172508	11496.837293246175	8971.236720185958	9005.470262577235	8970.388691136961	9878.21318587632	10757.502282505315	11894.87308405815	0.8920011787859994	0.7587173118227706	1.1529472255195912	0.9665371973287017	0.754210377596165	0.7570883858060348	0.7541390839351899	0.8304597380795415	0.9043814260551319	1.0	13.538052258124036	-7.749821482471287	24.849409008881278	0.8171262099026045	0.9444481167631287	0.1677548683773057	0.11574577348974678	336.9409345998066	720676.4487121409	0.03521409098256277	0.04506441145876079	1.7790105252449448e-08	7.749821482471287	0.12732190686052414	
KAEDS(ph)DSEPEPEDNVR	ddPTM_K562_Methotrexat_30min_R1	1	KAEDSDSEPEPEDNVR	16	1	Q9H0D6-2;Q9H0D6	Q9H0D6-2	XRN2	5-3 exoribonuclease 2	1	KAEDS(0.959)DS(0.041)EPEPEDNVR	81.316	0.018034	0.0	2149.1	1563.6	2662.3	2123.7	1335.4	1528.7	1397.5	1934.6	2029.2	2705.2	True	False	2054.6281372596804	1821.9583233442997	2103.5196124821546	1937.5185182569596	1511.0285067965362	1824.099639649907	1710.924949279237	1866.5590214582814	1934.8629349104563	2215.2620660760385	0.9274876181575691	0.822457239369241	0.9495579077053322	0.8746227130088249	0.6820992107146344	0.8234238592280824	0.7723352354016745	0.8425906126603678	0.8734239458800187	1.0	11.11326166473531	-6.253983081604154	22.956322960411427	0.8395675531383222	0.9274877534041267	0.06359864697654993	0.08372010133817462	762.1947770522551	2346439.4057336356	0.020918996875759988	0.20122869735556598	5.572074551084262e-07	6.253983081604154	0.0879202002658045	
KAEGEPQEES(ph)PLK	ddPTM_K562_Methotrexat_30min_R1	3	KAEGEPQEESPLK	13	1	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4;E9PJA7	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK	104.2	0.0025899	48224000.0	9378.0	5850.25	16269.0	9745.2	6178.8099999999995	5544.23	5171.5	7513.24	8346.84	12014.699999999999	True	False	8965.754348900133	6816.9043752526095	12854.359229039612	8890.853446399082	6991.431816743673	6615.573981249563	6331.340518924918	7248.9950906550275	7958.797230252319	9838.721405176622	0.9112723066010203	0.6928648647034471	1.3065070855930851	0.9036594370607118	0.7106036982676577	0.6724017998689131	0.6435125315768873	0.7367822293292078	0.8089259673584024	1.0	13.264255126419172	-7.660128121864245	5.180038277602508	0.7390457281899216	0.9665933956398459	0.23626682382048791	0.1678858490450459	0.27876737748376024	11.804520748908828	0.050282482387542904	0.0650687189253374	2.1871163043158645e-08	7.660128121864245	0.22754766744992427	
KAEPSEVDMNS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	KAEPSEVDMNSPK	13	1	Q9NR30	Q9NR30	DDX21	Nucleolar RNA helicase 2	1	KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK	64.65	0.023801	91308000.0	10845.3	6275.0	18226.0	11038.3	6170.299999999999	6160.6	6139.6	8744.0	8322.2	13571.7	True	False	10368.553597795546	7311.83709323707	14400.611673026995	10070.589377066348	6981.802602580996	7351.0487604024465	7516.561587545474	8436.468563853625	7935.302738474183	11113.733617538144	0.9329496238269865	0.6579100547900976	1.2957492206131302	0.9061391719137796	0.6282139596690791	0.6614382720854535	0.6763309114844974	0.7591030030214478	0.714008722141027	1.0	13.440055945747469	-7.633316356116116	6.37337780514718	0.7217130851184952	0.958433399033401	0.2586210813808204	0.17276415268641482	0.2743186197354132	14.37719988821209	0.05072635363950264	0.06562991228433684	2.3263960076560687e-08	7.633316356116116	0.23672031391490578	
KAEQGS(ph)EEEGEGEEEEEEGGESK	ddPTM_K562_Methotrexat_30min_R1	1	KAEQGSEEEGEGEEEEEEGGESK	23	1	Q5STZ8;Q8NE71	Q5STZ8	ABCF1	ATP-binding cassette sub-family F member 1	1	KAEQGS(1)EEEGEGEEEEEEGGESK	75.156	0.0013138	17805000.0	3147.5	1884.3	5887.6	2985.8	2046.5	1954.4	1492.0	2513.8	2205.8	4464.7	True	False	3009.1396687100846	2195.6485473763523	4651.873218814536	2724.0395497535596	2315.6506209069275	2332.0601398127696	1826.6189798387268	2425.3882291645978	2103.2528394566757	3656.099566172441	0.8230464226280203	0.6005439697789657	1.2723595554823928	0.7450671133131497	0.6333664001747017	0.6378546583878174	0.4996086530955743	0.66338133994084	0.5752723090248235	1.0	11.836089644354374	-7.5158297884868315	24.223266511109756	0.6458057729012738	0.8921516839551508	0.21037011015026652	0.1966462810116836	301.85574384549295	1037309.0678991898	0.05578302993865423	0.07509629198206424	3.0490897745405645e-08	7.5158297884868315	0.24634591105387693	
KALVVPEPEPDSDS(ph)NQER	ddPTM_K562_Methotrexat_30min_R1	3	KALVVPEPEPDSDSNQER	18	1	C9J0A5;C9JXC9;Q5VTR2	C9J0A5	RNF20	E3 ubiquitin-protein ligase BRE1A	1	KALVVPEPEPDS(0.004)DS(0.996)NQER;KALVVPEPEPDS(0.037)DS(0.963)NQER;KALVVPEPEPDS(0.009)DS(0.991)NQER	208.61	8.6472e-27	175992000.0	11005.3	8235.7	13567.2	10938.900000000001	9249.0	8858.0	7991.099999999999	9926.9	10856.3	13128.599999999999	True	False	10521.52018937414	9596.509442035464	10719.630126758027	9979.903620737892	10465.405615816344	10569.683134701956	9783.307593692532	9577.765300379513	10351.59298258841	10750.883321264928	0.9786656477391849	0.8926252062520159	0.9970929649617644	0.9282868507183907	0.9734461162940986	0.9831455536119006	0.9100003507936357	0.8908817084299462	0.9628597644728659	1.0	13.392167579908785	-8.767652190293754	24.999530239043896	0.9318422716446201	0.956874461560822	0.025815063389025172	0.039704902556666734	404.88159469695137	1629173.93681218	0.01571339554235731	0.010891663983688083	1.707449271878969e-09	8.767652190293754	0.02503218991620193	
KANNSQEPS(ph)PQLASSVASTR	ddPTM_K562_Methotrexat_30min_R1	1	KANNSQEPSPQLASSVASTR	20	1	Q96HC4;Q96HC4-7;Q96HC4-4;H0Y8Y3	Q96HC4	PDLIM5	PDZ and LIM domain protein 5	1	KANNS(0.002)QEPS(0.998)PQLASSVASTR	106.67	0.00013875	18759000.0	1273.8	1088.2	1959.2	1266.0	1000.4	1020.2	766.21	1202.5	1172.5	1257.3	True	False	1217.8052772050546	1268.0065537626413	1547.990694052149	1155.011745591803	1131.9701349402824	1217.3392113369762	938.0520968781713	1160.2073934165112	1117.9907309198265	1029.5907865139002	1.1828051427387296	1.23156361767377	1.5035009193249516	1.1218163184060403	1.0994369314172179	1.1823524717609166	0.9110921631829374	1.1268626415596306	1.0858593001839503	1.0	10.007855333164168	-7.497324489794517	22.936103244491083	1.0753804493691506	1.3008742833708	0.5147116504230194	0.10356478523477268	218.78845584583064	196372.00297955738	0.02924284266467796	0.0431192950253038	3.181819288204261e-08	7.497324489794517	0.22549383400164946	
KAPAGQEEPGT(ph)PPSSPLSAEQLDR	ddPTM_K562_Methotrexat_30min_R1	4	KAPAGQEEPGTPPSSPLSAEQLDR	24	1	P13051;Q68DM5;F5GYA2;P13051-2	P13051	UNG;DKFZp781L1143	Uracil-DNA glycosylase	1	KAPAGQEEPGT(0.997)PPS(0.002)S(0.001)PLSAEQLDR;KAPAGQEEPGT(0.999)PPS(0.001)SPLSAEQLDR;KAPAGQEEPGT(0.997)PPS(0.003)SPLSAEQLDR;KAPAGQEEPGT(0.966)PPS(0.016)S(0.016)PLS(0.002)AEQLDR	97.469	3.3155000000000003e-06	83886000.0	5198.54	4243.74	7889.9	6042.240000000001	4398.47	4102.01	3395.37	5103.46	5522.959999999999	7176.7	True	False	4970.018406156038	4944.945903753607	6233.917811863035	5512.52620038279	4976.945901070359	4894.665377667505	4156.868153870656	4923.968419131337	5266.198795088243	5876.930086355138	0.8456827515602512	0.8414164931508407	1.0607439122573092	0.9379941771268627	0.8468615123779789	0.832860916455647	0.707319653763099	0.8378470301294965	0.8960798780497882	1.0	12.52084702037709	-7.80605498776124	6.227436352867435	0.8364238134892721	0.9256905610840274	0.10544895955602518	0.08885937045645828	0.3458320305906851	32.41956739216292	0.028420395042628343	0.03281770424963382	1.5629497387953402e-08	7.80605498776124	0.08926674759475528	
KAPSTSHSGFPPVANGPRS(ph)PPSLR	ddPTM_K562_Methotrexat_30min_R1	1	KAPSTSHSGFPPVANGPRSPPSLR	24	2	Q66K74-2;Q66K74	Q66K74-2	MAP1S	Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain	1	KAPSTSHS(0.04)GFPPVANGPRS(0.907)PPS(0.053)LR	49.433	0.021678	48676000.0	2020.5	2037.4	3171.8	2822.4	1811.3	2004.3	2143.1	2218.4	2158.2	2866.1	True	False	1931.68123927839	2374.045720121308	2506.08252521162	2574.964574058691	2049.5176983379984	2391.6026085891995	2623.7447290163373	2140.3776145989104	2057.865753067095	2347.021516923162	0.8230351640792521	1.0115142545576548	1.0677714316385902	1.097120139501044	0.8732419722443885	1.0189947520057172	1.1179039945300318	0.9119548326105028	0.8767988440791387	1.0	11.196615352861494														
KARRDAR	ddPTM_K562_Methotrexat_30min_R1	1	KARRDAR	7	3	Q504T8	Q504T8	MIDN	Midnolin	0		63.148	0.029408999999999998	8793800.0	5368.8	4979.3	5863.4	5794.4	4966.1	4257.0	4613.7	5224.8	5055.5	5196.5	False	True	5132.793980419605	5802.044691371367	4632.752468101965	5286.413948386369	5619.229195448759	5079.605001628612	5648.4396697600105	5041.040822555172	4820.470908456444	4255.363494885459	1.206194015291228	1.363466293383602	1.0886854844880094	1.2422943315512611	1.3205050995531962	1.1936947355340648	1.3273694894804866	1.1846322478946916	1.1327988582526947	1.0	12.055066657435898	-9.968368496832817	1.7655486043972126	1.0026038814393343	1.2474254612876265	0.5110572467169614	0.07534987568949751	0.2776714978533027	1.9623088574958802	0.06936735569739642	0.019919951656571757	1.0755522253282454e-10	9.968368496832817	0.24482157984829223	
KAS(ph)GPPVSELITK	ddPTM_K562_Methotrexat_30min_R1	1	KASGPPVSELITK	13	1	P10412;P16402;P16403	P10412;P16402;P16403	HIST1H1E;HIST1H1D;HIST1H1C	Histone H1.4;Histone H1.3;Histone H1.2	1	KAS(1)GPPVSELITK	75.548	0.029901999999999998	44914000.0	5569.1	4300.8	10973.0	5518.6	4373.8	3825.9	3009.5	4791.1	4760.9	6768.7	True	False	5324.289032252057	5011.434098899439	8669.917254917431	5034.792906179245	4949.031363656347	4565.201027890742	3684.4569837966824	4622.594297378669	4539.566798154543	5542.822839955972	0.9605735535820137	0.9041303039263737	1.5641700096238866	0.9083445478151413	0.8928720088220713	0.8236238392795185	0.6647257345547687	0.8339783591956526	0.8189990784895087	1.0	12.436405181516367	-7.504347493823288	24.809801310441735	0.8284609294105796	1.1386055484131192	0.36032707115848805	0.18119220792471485	732.3496212085314	980476.556086604	0.0519238682059874	0.07545968701986086	3.130779678290768e-08	7.504347493823288	0.31014461900253965	
KAS(ph)PEPEGEAAGK	ddPTM_K562_Methotrexat_30min_R1	3	KASPEPEGEAAGK	13	1	Q8IU81	Q8IU81	IRF2BP1	Interferon regulatory factor 2-binding protein 1	1	KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK	143.28	1.66e-06	48142000.0	9204.8	6055.6	16208.3	9433.4	6562.0	4895.700000000001	4571.0	7958.1	8259.6	13112.099999999999	True	False	8800.168013516317	7056.184972399421	12806.399329525035	8606.388468298355	7425.018018270832	5841.724737249983	5596.163107803503	7678.2091123059845	7875.612998810577	10737.371631153203	0.8195830707753171	0.6571612881430631	1.1926940567437188	0.801535865940222	0.6915116914392744	0.5440553738776178	0.5211855657083624	0.7150920519532524	0.7334768013393916	1.0	13.390353263117545	-7.665751257996169	4.189501452009362	0.6695189512090542	0.8841736576328582	0.17559668501496695	0.17492642065131003	0.32620975807058844	10.456432568469275	0.05310015253312518	0.06888869329541683	2.1589806104478173e-08	7.665751257996169	0.2146547064238039	
KAS(ph)PPSGLWSPAYASH	ddPTM_K562_Methotrexat_30min_R1	1	KASPPSGLWSPAYASH	16	1	Q8TEM1	Q8TEM1	NUP210	Nuclear pore membrane glycoprotein 210	1	KAS(0.996)PPS(0.004)GLWSPAYASH	99.021	0.0017808	72596000.0	2291.5	1789.8	3290.2	2823.4	1762.8	1678.6	1979.1	2441.1	2274.7	2938.2	True	False	2190.768403764626	2085.5340286017044	2599.6319832433546	2575.876905611291	1994.6390982334365	2002.9656931486454	2422.9635542887563	2355.2451293713484	2168.949693495375	2406.063508259878	0.9105197748288205	0.8667826187638796	1.0804502766942632	1.0705772714512536	0.8290051743796267	0.8324658456738898	1.0070239401291203	0.978879036769365	0.9014515560580572	1.0	11.232459007742316	-12.13819049190617	4.385430082157152	1.000009303239783	0.9440191367074875	0.038731563707473105	0.0862480547374149	149855222.62108707	3.339697846938283	14077.869560575127	0.022309179104897287	7.274606529751591e-13	12.13819049190617	-0.05599016653229549	
KAS(ph)SPSPLTIGTPESQR	ddPTM_K562_Methotrexat_30min_R1	2	KASSPSPLTIGTPESQR	17	1	Q9NPI6-2;Q9NPI6	Q9NPI6-2	DCP1A	mRNA-decapping enzyme 1A	1	KAS(0.85)S(0.148)PS(0.002)PLTIGTPESQR;KAS(0.781)S(0.18)PS(0.029)PLT(0.006)IGT(0.003)PESQR	112.53	0.00059952	39672000.0	3580.4	2279.6800000000003	4541.4	3510.3	2670.7	2580.1	2418.7	3203.9	3169.5	4412.0	True	False	3423.0099030499096	2656.3583720654474	3588.222201903037	3202.5574490923427	3021.9438618402764	3078.6678094202434	2961.155044595127	3091.2170210121935	3022.1506368020378	3612.944046845884	0.9474295363190616	0.7352337422397837	0.993157423801116	0.8864121358004948	0.8364214398721306	0.8521216408286019	0.8195961537738811	0.8555950440779285	0.8364786715809752	1.0	11.818959196791138	-7.727674333312486	20.839486123434362	0.8563976272655494	0.886792358636966	0.010941101207305293	0.07794311096147798	134.40311493844266	82947.68359676455	0.02190546838958107	0.028273956082111713	1.872085444707944e-08	7.727674333312486	0.030394731371416683	
KASATCSSATAAASSGLEEWTS(ph)RSPR	ddPTM_K562_Methotrexat_30min_R1	1	KASATCSSATAAASSGLEEWTSRSPR	26	2	A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3;Q96G74-4	A0A087WXV6	OTUD5	OTU domain-containing protein 5	1	KASATCSSATAAAS(0.033)S(0.102)GLEEWT(0.245)S(0.376)RS(0.243)PR	112.75	5.4038000000000004e-08	21224000.0	2777.0	2138.0	3630.1	2811.6	2023.3	1900.2	1583.0	2425.4	2374.4	2870.5	True	False	2654.926405085913	2491.2681602136795	2868.1916182516866	2565.1113932906114	2289.39941425897	2267.3867568932787	1938.0280463034212	2340.097307270194	2264.0146622567463	2350.62463428629	1.1294557056711936	1.0598324053428005	1.220182744797339	1.0912467077370884	0.9739536380525045	0.9645890389393097	0.8244736390639658	0.995521476775771	0.9631544863581162	1.0	11.198828461471026	-7.751736537096644	3.117838319782692	0.9439276896203797	1.1326380547232797	0.6793296025449419	0.0583892379433614	0.14378782146876748	2.8886307303916996	0.018748846228969124	0.023483105617509006	1.7711831131835936e-08	7.751736537096644	0.18871036510290007	
KASATCSSATAAASSGLEEWTSRS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	KASATCSSATAAASSGLEEWTSRSPR	26	2	A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3;Q96G74-4	A0A087WXV6	OTUD5	OTU domain-containing protein 5	1	KASATCSSATAAASSGLEEWT(0.02)S(0.02)RS(0.96)PR	123.03	9.366e-10	29063000.0	2421.1	1825.4	3520.8	2991.9	1924.4	1922.0	2227.9	2609.7	2374.9	3420.2	True	False	2314.6713429432857	2127.0163235051696	2781.832194578811	2729.6047722244207	2177.492330746782	2293.39929836274	2727.5632876559653	2517.9153718079583	2264.491417365882	2800.768637584383	0.8264414674893145	0.7594402104344063	0.9932388406698582	0.9745913088268011	0.7774624085425469	0.8188463936602629	0.9738624072884662	0.899008699975882	0.8085249838126468	1.0	11.451607096637254	-13.443854190266155	2.2647388586151402	2.2831070575929036	0.873255897493741	0.18396511107814673	0.08180594844147364	6860939.617006372	692111.4347550531	45331051.042524695	0.02258251998542316	3.598701374306436e-14	13.443854190266155	-1.4098511600991626	
KASGPPVSELITK	ddPTM_K562_Methotrexat_30min_R1	2	KASGPPVSELITK	13	1	P10412;P16402;P16403	P10412;P16402;P16403	HIST1H1E;HIST1H1D;HIST1H1C	Histone H1.4;Histone H1.3;Histone H1.2	0	;	107.61	0.003279	16567900.0	11265.0	8044.4	16596.7	11578.0	7901.299999999999	7078.299999999999	7082.7	10015.400000000001	10288.7	15280.400000000001	False	True	10769.804088330138	9373.600368579479	13113.279477325084	10562.974716004657	8940.459443426285	8446.081297399056	8671.17576977464	9663.152705217237	9810.380582699201	12512.971489896609	0.8606911713197811	0.7491106629746609	1.0479748545669736	0.8441619741988189	0.7144953099785379	0.6749860578055903	0.6929749481788587	0.772250836903096	0.7840168572765015	1.0	13.61113681051443	-6.210646255974609	20.098345280485344	0.7995862270705975	0.8606946574976908	0.011435765048203428	0.1189616046021842	16049.309812345437	6348489.766431098	0.031051518771437615	13.637086556312973	6.156781542204207e-07	6.210646255974609	0.06110843042709335	
KASGS(ph)ENEGDYNPGR	ddPTM_K562_Methotrexat_30min_R1	1	KASGSENEGDYNPGR	15	1	Q02880-2;Q02880	Q02880-2	TOP2B	DNA topoisomerase 2-beta	1	KAS(0.011)GS(0.989)ENEGDY(0.001)NPGR	181.86	2.2686999999999996e-67	0.0	555.23	359.56	838.33	621.82	412.55	429.68	361.25	463.29	604.87	675.1	True	False	530.8227540136303	418.971178524991	662.3759894572984	567.3060060378313	466.80755614715486	512.7095788348086	442.26950835572427	446.99582810472845	576.7497257240727	552.8328481472475	0.9601867106714418	0.757862308524398	1.1981487563142665	1.0261799890131145	0.8443918586089881	0.9274224217194993	0.8000058423408396	0.8085551168002787	1.0432624031965172	1.0	9.110699529906118	-7.75985757687151	24.99368843645544	0.8903448156228091	0.9845103112175558	0.08863605087568471	0.1237270689998785	99.64913996304091	1574508.4705159448	0.03814240950564572	0.04665705224493249	1.738370818994973e-08	7.75985757687151	0.09416549559474674	
KASPEAAS(ph)TPRDPIDVDLPEEAER	ddPTM_K562_Methotrexat_30min_R1	1	KASPEAASTPRDPIDVDLPEEAER	24	2	P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2;H3BT29;P29590-4	P29590-2;P29590-4	PML	Protein PML	1	KAS(0.051)PEAAS(0.475)T(0.475)PRDPIDVDLPEEAER	66.906	0.012715	14358000.0	1100.2	864.24	1160.6	1071.4	722.56	725.89	642.6	1008.4	863.48	1129.1	True	False	1051.836525342283	1007.0409704317457	917.0059205374259	977.472025455811	817.5893049804585	866.1579691407542	786.7194078045349	972.9340004334392	823.337003270492	924.6090487973003	1.1376013751006178	1.0891532715818324	0.9917769263995803	1.057173328259412	0.8842540596416946	0.9367829249209952	0.8508670868275326	1.0522652808762778	0.8904704148650292	1.0	9.85269967152564	-6.793880164204285	0.9594894828679777	0.9381716277797122	1.166271510161595	0.525936132694823	0.0628704638623645	0.7743958542492649	0.9792678162801414	0.022318155490821886	0.155175926825126	1.6073847208951276e-07	6.793880164204285	0.22809988238188283	
KASS(ph)PSPLTIGTPESQR	ddPTM_K562_Methotrexat_30min_R1	1	KASSPSPLTIGTPESQR	17	1	Q9NPI6-2;Q9NPI6	Q9NPI6-2	DCP1A	mRNA-decapping enzyme 1A	1	KAS(0.136)S(0.425)PS(0.425)PLT(0.014)IGTPESQR	120.99	0.00020574	6326600.0	1622.2	1539.7	2291.4	1877.3	1267.1	1228.4	1264.6	1524.1	1597.1	2031.0	True	False	1550.8900303674347	1794.109254574839	1810.4664538337558	1712.72002369628	1433.7458596389774	1465.7709147288201	1548.2187412225571	1470.4965391318967	1522.8511695966342	1663.1662192076133	0.9324925028277267	1.078731177831168	1.088566153475821	1.029794859898174	0.8620580691700561	0.8813135438904965	0.9308863560012535	0.8841548861138422	0.9156337785180427	1.0	10.699716645495908	-7.716391361935453	8.772183039440932	0.9059826724241419	1.0401565524758638	0.5484644560929726	0.052998168208741855	0.20212323884697767	36.21641136919927	0.015354168767175236	0.019745167548879162	1.9213595266315195e-08	7.716391361935453	0.13417388005172193	
KASTAPGAEAS(ph)PSPCITER	ddPTM_K562_Methotrexat_30min_R1	2	KASTAPGAEASPSPCITER	19	1	Q66PJ3	Q66PJ3	ARL6IP4	ADP-ribosylation factor-like protein 6-interacting protein 4	1	KASTAPGAEAS(0.623)PS(0.377)PCITER;KASTAPGAEAS(0.63)PS(0.37)PCITER	140.04	3.1849e-09	33848000.0	7085.7	5991.0	9604.5	8784.9	5547.9	5107.0	5385.1	6948.5	6631.5	9186.0	True	False	6774.221112177622	6980.910920411672	7588.646703258405	8014.741456437144	6277.546093197917	6093.855471768217	6592.845756253039	6704.117316552706	6323.203012447611	7522.32638584005	0.9005486819781373	0.9280255285854743	1.0088164636864463	1.0654604766318052	0.83452189804137	0.8101025080803764	0.8764370778517859	0.8912292517873817	0.8405914192117938	1.0	12.8769631894207	-7.782544222259699	24.999599629629632	0.8668207521927487	0.974671143000503	0.3690176988264172	0.06360165418099797	246.1753793027815	291603.7956960916	0.020084656460696043	0.022796264496064235	1.6498929915613848e-08	7.782544222259699	0.10785039080775427	
KASVVDPSTESSPAPQEGSEQPASPASPLS(ph)SR	ddPTM_K562_Methotrexat_30min_R1	1	KASVVDPSTESSPAPQEGSEQPASPASPLSSR	32	1	Q66K14-2;Q66K14	Q66K14-2	TBC1D9B	TBC1 domain family member 9B	1	KASVVDPSTESSPAPQEGS(0.001)EQPAS(0.004)PAS(0.099)PLS(0.448)S(0.448)R	149.62	2.6655e-42	0.0	1558.9	1435.4	2071.0	1833.3	1404.1	994.74	1121.1	1625.4	1307.9	1969.4	True	False	1490.3726225741548	1672.5754523717105	1636.3254018895477	1672.5774353818726	1588.7637609652654	1186.959426666676	1372.535213335924	1568.2337607145096	1247.0960144733826	1612.7225761238183	0.9241345316540853	1.0371129400270125	1.0146353911795907	1.037114169631032	0.9851438706735675	0.7359972782916795	0.8510671541752798	0.9724138447195068	0.7732861391887873	1.0	10.655282569111435	-8.031513044311271	23.61844183994074	0.8634952433916253	1.0070623554717153	0.41057036677661696	0.07986564047120476	316.00929405442554	236842.20282979734	0.025432780160307703	0.02546587100970562	9.300085809346092e-09	8.031513044311271	0.14356711208009	
KATQASQEY(ph)	ddPTM_K562_Methotrexat_30min_R1	2	KATQASQEY	9	1	P16104	P16104	H2AFX	Histone H2AX	1	KATQAS(0.001)QEY(0.999);KATQASQEY(1)	62.54600000000001	0.027582	50722000.0	12561.599999999999	9702.5	17621.4	13818.9	9463.6	8710.5	8994.7	11622.900000000001	11967.2	14724.900000000001	True	False	12009.407104835138	11305.67321069843	13922.908950679126	12607.418492226348	10708.229277309933	10393.680847236548	11011.990440988871	11214.116019077564	11410.847484062897	12058.077922801664	0.9959636338164236	0.9376016047565552	1.1546540866476813	1.0455578884911574	0.8880544101527835	0.86196829327021	0.9132459179224033	0.9300085876764672	0.946323913074499	1.0	13.55771233718226	-7.75618815880928	24.981289380359346	0.9162013043547087	1.0352562596062727	0.43585219316703183	0.06107761559650715	121.3729497935416	577395.8947823293	0.01901975285462112	0.023822096213581733	1.7531207947705347e-08	7.75618815880928	0.11905495525156395	
KAVPMAPAPAS(ph)PGSSNDSSAR	ddPTM_K562_Methotrexat_30min_R1	3	KAVPMAPAPASPGSSNDSSAR	21	1	Q66K74-2;Q66K74	Q66K74-2	MAP1S	Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain	1	KAVPMAPAPAS(0.925)PGS(0.019)S(0.006)NDS(0.025)S(0.025)AR;KAVPMAPAPAS(0.752)PGS(0.104)S(0.041)NDS(0.046)S(0.058)AR;KAVPMAPAPAS(0.722)PGS(0.059)S(0.073)NDS(0.073)S(0.073)AR	87.052	0.00047270000000000005	51963000.0	7537.1	5801.4	9437.0	8785.1	5793.3	4872.1	5563.099999999999	6616.5	6741.6	8586.5	True	False	7205.778108668721	6759.982743060641	7456.30266423547	8014.923922747669	6555.220494551719	5813.5643712555175	6810.766787359807	6383.7939447321005	6428.184487478975	7031.40164511382	1.0247996732879108	0.9613990331157102	1.0604290638719118	1.1398757071880976	0.932277919169501	0.8268002120594848	0.9686214969802878	0.9078977801201631	0.914210965596877	1.0	12.779596590587674	-7.914727379367793	9.844330120313831	0.9160417651588642	1.0413242653059844	0.5043103610553149	0.058812786200543886	0.28486202529780397	30.482613008057097	0.01859258990505645	0.02109446493238457	1.2169496794325446e-08	7.914727379367793	0.12528250014712028	
KAVVLPGGTATS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	KAVVLPGGTATSPK	14	1	Q8N1G0;F8WCX2;Q8N1G0-2;H0Y5I5	Q8N1G0	ZNF687	Zinc finger protein 687	1	KAVVLPGGT(0.001)AT(0.222)S(0.777)PK;KAVVLPGGT(0.004)AT(0.23)S(0.767)PK	129.36	0.00037832	36124000.0	11599.400000000001	7359.9	18062.6	13295.2	8482.5	7409.299999999999	6381.2	9703.7	9552.3	15427.6	True	False	11089.504264729396	8575.998378090113	14271.507100033872	12129.630458129644	9598.097430658689	8841.04236282989	7812.346537631962	9362.415370890481	9108.21565796627	12633.512143499447	0.8777847473266159	0.6788293137077387	1.129654757752954	0.9601154706904624	0.7597331068065165	0.6998087517079749	0.6183827940238924	0.7410777988374275	0.7209567343197503	1.0	13.624968146753497	-7.848549293500768	5.857437867112782	0.7316337982046902	0.9100177986623295	0.22099834614494518	0.13841345716472503	0.28850938498117384	15.330043851414732	0.04353287642401996	0.049812672276771525	1.417263839352639e-08	7.848549293500768	0.17838400045763925	
KCS(ph)LPAEEDSVLEK	ddPTM_K562_Methotrexat_30min_R1	1	KCSLPAEEDSVLEK	14	1	E7EVA0;P27816;P27816-6	E7EVA0	MAP4	Microtubule-associated protein;Microtubule-associated protein 4	1	KCS(1)LPAEEDSVLEK	108.97	0.0013599999999999999	20470000.0	2143.6	1396.6	3309.9	2238.6	1172.8	1321.7	1143.3	1922.2	1821.5	2855.7	True	False	2049.369910674166	1627.3644118589455	2615.1972224597853	2042.3454136507194	1327.0437567552615	1577.0998192747322	1399.7141284514862	1854.5951364866678	1736.8188625760883	2338.5050577012216	0.8763589815318685	0.6958994621370048	1.118320105337106	0.8733551406805035	0.5674752562048172	0.6744051350588226	0.5985508236734035	0.7930686873560825	0.7427047706637855	1.0	11.191370833672343	-7.6154368019874354	9.465997216393129	0.7100073580140269	0.8964518726599885	0.21981441436080573	0.14694685360469747	0.4121477226085117	38.33096596382545	0.04272828442890362	0.05517251333718919	2.4241707013045163e-08	7.6154368019874354	0.18644451464596157	
KDAS(ph)S(ph)SPASTAS(ph)S(ph)HEK	ddPTM_K562_Methotrexat_30min_R1	1	KDASSSPASTASSHEK	16	1	A0A669KAE5	A0A669KAE5			4	KDAS(0.921)S(0.924)S(0.128)PAS(0.208)T(0.208)AS(0.805)S(0.805)HEK	41.136	0.032320999999999996	704140.0	1094.4	840.38	1250.7	1233.8	793.13	941.0	902.38	963.33	1032.1	1164.6	True	False	1046.2914863975595	979.2385109824014	988.1951618267781	1125.6346695980772	897.4404969264158	1122.8349322369086	1104.7616856748468	929.4491378793582	984.1178962749271	953.6796547952671	1.0971100003409153	1.0268002531653264	1.0361919297092699	1.18030689229679	0.9410292988991943	1.17737117132687	1.1584201048223195	0.9745926037175339	1.031916630837841	1.0	9.897360929747213	-9.283113672096421	24.754802476528585	1.002440957717033	1.0851303332063809	0.23169329419751006	0.0716202745479014	1173.3450970397037	1340100.0718893101	0.03880706206553204	0.018664477514930954	5.210583116222924e-10	9.283113672096421	0.08268937548934785	
KDDDS(ph)DDESQSSHTGK	ddPTM_K562_Methotrexat_30min_R1	1	KDDDSDDESQSSHTGK	16	1	O94874-3;O94874;O94874-2	O94874-3	UFL1	E3 UFM1-protein ligase 1	1	KDDDS(0.966)DDES(0.034)QSSHTGK	140.84	1.1283e-06	10877000.0	3101.0	1738.5	6009.7	3421.5	1772.5	1839.0	1756.5	2383.7	2397.5	4048.0	True	False	2964.6837530325565	2025.757575552612	4748.346097409757	3121.542407221449	2005.614818254349	2194.360723043226	2150.439837859736	2299.863919905978	2286.0407482987484	3314.867974078001	0.8943595269000585	0.6111125967591687	1.4324389793323409	0.9416792558954558	0.6050361082064487	0.6619753004351753	0.6487256369411999	0.6938025700844581	0.6896325181501651	1.0	11.694735695894066	-7.688727365604001	6.845502765762336	0.6955395498292398	0.9805029457784571	0.25084224914338527	0.21286685086759427	0.29184487509504015	22.294148076510073	0.06344225118121513	0.0817772182023596	2.047729724106431e-08	7.688727365604001	0.28496339594921727	
KDDDSDDES(ph)QSSHTGK	ddPTM_K562_Methotrexat_30min_R1	1	KDDDSDDESQSSHTGK	16	1	O94874-3;O94874;O94874-2	O94874-3	UFL1	E3 UFM1-protein ligase 1	1	KDDDS(0.067)DDES(0.933)QSSHTGK	129.06	7.155e-05	11826000.0	4035.4	2598.4	7521.2	4611.5	2633.0	2490.6	2317.5	3206.9	2975.3	5804.2	True	False	3858.008647851527	3027.741434751746	5942.602903279413	4207.21695481564	2979.2856510373485	2971.873201093779	2837.258368482741	3094.111509311776	2836.9789524142934	4753.003136152057	0.8116991588974416	0.6370165026238441	1.2502838169996315	0.8851702459051446	0.6268217305342076	0.6252622007524599	0.5969401423075291	0.6509803214261524	0.5968813550396811	1.0	12.21462363822944	-7.740821542451568	9.06644673924779	0.6581573667814616	0.9032833369208488	0.24383568992940763	0.18068773661190343	0.3047594917484444	118.78176479331843	0.05354762691646363	0.06772450379999992	1.816261836310707e-08	7.740821542451568	0.2451259701393872	
KDKS(ph)PVREPIDNLTPEER	ddPTM_K562_Methotrexat_30min_R1	1	KDKSPVREPIDNLTPEER	18	3	G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23;H0Y4X3;Q14498-3	G3XAC6	RBM39	RNA-binding protein 39	1	KDKS(1)PVREPIDNLTPEER	60.528	0.027112	34000000.0	2259.6	1628.3	3809.2	2216.6	1827.3	1346.5	1267.8	1871.9	2105.3	3015.3	True	False	2160.270689568644	1897.348898632338	3009.7009757980013	2022.2741194935138	2067.621978784864	1606.6920682858647	1552.136422680657	1806.0642159969789	2007.4250625206905	2469.199951145603	0.8748868995264522	0.7684063405849533	1.218897227987401	0.8189997406063715	0.837365146482194	0.6506933825024694	0.6285989200512224	0.7314370045888923	0.8129860287698982	1.0	11.26982795259116	-7.726910294841587	2.714552360927965	0.7437748692734848	0.9411674332372886	0.1977208767854548	0.14681390418298043	0.37412218106150547	5.63752928000614	0.047044708579960286	0.060436148763257515	1.8753818352345915e-08	7.726910294841587	0.19739256396380378	
KDNDFIYHDR	ddPTM_K562_Methotrexat_30min_R1	2	KDNDFIYHDR	10	1	Q8WUM4;Q8WUM4-2	Q8WUM4	PDCD6IP	Programmed cell death 6-interacting protein	0	;	89.561	0.0052978	17491200.0	18023.9	13093.8	24254.0	17289.4	14593.2	12590.6	11800.0	16958.5	17638.3	19462.0	False	True	17231.590937208493	15257.32789345459	19163.416850521044	15773.665145525207	16512.461588575105	15023.555258046788	14446.450376740608	16362.059942830696	16818.29928288543	15937.243209364135	1.0812152836498001	0.9573379594590079	1.2024298430271383	0.989736112971984	1.0360927151361405	0.9426696361902479	0.9064585503879622	1.0266555970744649	1.0552828404478147	1.0	13.960114476121007	-7.419212553522792	21.480771312418614	0.9909015280275124	1.0727067832616246	0.24679202830420877	0.06871565457420631	17.12285069540787	3537.2525001431673	0.01951686522828505	0.02894815455831553	3.808793668097409e-08	7.419212553522792	0.0818052552341122	
KDPS(ph)LPAAS(ph)S(ph)S(ph)SSSS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	KDPSLPAASSSSSSSK	16	1	Q01831-2;Q01831	Q01831-2	XPC	DNA repair protein complementing XP-C cells	5	KDPS(0.991)LPAAS(0.432)S(0.734)S(0.724)S(0.617)S(0.423)S(0.334)S(0.745)K	41.798	0.033431999999999996	36559000.0	213.12	209.52	264.52	233.06	248.6	231.06	221.81	382.05	289.22	229.59	True	False	203.75149998268267	244.13961876892915	209.0008668796828	212.62799164899337	281.29525744317704	275.70907485936266	271.55653881905374	368.61308495199864	275.7742253276181	188.00902622741307	1.0837325423739375	1.2985526475394926	1.1116533661893355	1.1309456567888476	1.4961795350342715	1.4664672244292614	1.444380327200795	1.9606137659908383	1.4668137528357044	1.0	7.554658116469815	-7.779436385623506	8.176117636319612	1.5193918793004677	1.1629877128428536	0.3099128094670608	0.22460187664023046	0.18852335370001597	64.52774537516018	0.06764399367512615	0.07897786677179455	1.6617420677893237e-08	7.779436385623506	-0.3564041664576141	
KDS(ph)EEEVSLLGSQDIEEGNHQVEDGCR	ddPTM_K562_Methotrexat_30min_R1	2	KDSEEEVSLLGSQDIEEGNHQVEDGCR	27	1	Q9Y487	Q9Y487	ATP6V0A2	V-type proton ATPase 116 kDa subunit a isoform 2	1	KDS(0.971)EEEVS(0.028)LLGS(0.001)QDIEEGNHQVEDGCR;KDS(0.997)EEEVS(0.003)LLGSQDIEEGNHQVEDGCR	81.525	0.00031874	30682000.0	1569.02	1414.06	2542.8999999999996	1517.29	1306.92	1283.9499999999998	1283.01	1500.11	1487.23	1989.31	True	False	1500.0477594915014	1647.7093800896905	2009.1800407846101	1384.2715414446968	1478.8028876011135	1532.0551660420601	1570.757652361184	1447.3502810295574	1418.0890019154742	1629.0266821919731	0.9208245487256714	1.0114686260832624	1.2333622664062893	0.8497537557715503	0.9077830975802541	0.9404727269295363	0.9642307701477401	0.8884754908262418	0.8705130599870426	1.0	10.669794518943434	-7.306783298475105	24.99971990998494	0.9151936998798574	1.050844191780221	0.3658994897841422	0.08309738821284321	457.84919323712353	252427.44691803996	0.023567250211013923	0.03495609626103355	4.934199461171842e-08	7.306783298475105	0.1356504919003635	
KDS(ph)LTQAQEQGNLLN	ddPTM_K562_Methotrexat_30min_R1	2	KDSLTQAQEQGNLLN	15	1	Q5JTD0-4;Q5JTD0-2;Q5JTD0	Q5JTD0-4	TJAP1	Tight junction-associated protein 1	1	KDS(0.958)LT(0.042)QAQEQGNLLN;KDS(0.875)LT(0.125)QAQEQGNLLN	90.348	0.0098376	32001000.0	5340.6	4057.5	8656.5	6146.8	3821.2	3933.3	3965.0	5191.7	5035.9	7572.599999999999	True	False	5105.833618653878	4727.9329092923335	6839.6189480718795	5607.919587522666	4323.754777722721	4693.3545578825	4854.252181675976	5009.104968316424	4801.7821081783795	6201.128760005702	0.8233716499460629	0.7624310173633592	1.1029635430543117	0.9043385171569167	0.6972528623512642	0.7568548790911066	0.7828013849645516	0.8077730945731593	0.7743400103457881	1.0	12.598315130523495														
KEEDYQT(ph)RYR	ddPTM_K562_Methotrexat_30min_R1	1	KEEDYQTRYR	10	2	Q86UR5-5;Q86UR5-3;Q86UR5-4;Q86UR5;Q86UR5-2;Q86UR5-8;Q86UR5-7;Q86UR5-6	Q86UR5-5	RIMS1	Regulating synaptic membrane exocytosis protein 1	1	KEEDYQT(0.999)RYR	80.318	0.024701	16431000.0	227.55	289.72	262.35	182.6	278.07	233.05	207.25	333.06	209.04	337.95	True	False	217.54717446067676	337.59130560201504	207.28632022487835	166.59174150478918	314.6410789912481	278.08361419533634	253.73108818470263	321.34609101979487	199.32177602684905	276.7439801975447	0.7860954168014341	1.2198686502992275	0.7490183529083947	0.601970606138833	1.1369391983401111	1.0048406978783617	0.916844109864955	1.1611674110866381	0.7202388860800862	1.0	8.112408125268978	-7.806284492930296	24.999999459425933	0.995146928077336	0.8599780630678471	0.13300605880530458	0.1852974566708598	309.1318063043832	172331.23286668368	0.05808638618868116	0.06586408585966949	1.5621240081082254e-08	7.806284492930296	-0.13516886500948888	
KEEENADS(ph)DDEGELQDLLSQDWR	ddPTM_K562_Methotrexat_30min_R1	2	KEEENADSDDEGELQDLLSQDWR	23	1	J3QQQ3;Q96NB3	J3QQQ3	ZNF830	Zinc finger protein 830	1	KEEENADS(1)DDEGELQDLLSQDWR;KEEENADS(1)DDEGELQDLLSQDWR	94.834	4.6892e-05	38938000.0	3385.6000000000004	2256.17	5123.700000000001	3649.4	2418.11	2500.5	2058.89	3720.7	3211.8999999999996	4659.5	True	False	3236.773077802978	2628.963744167119	4048.30538950337	3329.462768059026	2736.1338494606653	2983.686235981288	2520.648492895549	3589.8408720871653	3062.579470056621	3815.61939852185	0.8482955818541247	0.6890005185489845	1.0609824950233928	0.8725877558303748	0.7170877290645468	0.7819664186467737	0.6606131874347936	0.9408278177529577	0.8026428084632989	1.0	11.897701556831073	-12.743666404040265	4.138569958820903	1.015735808306019	0.8189729076549488	0.18300621463260314	0.11451593581819387	0.017911191008912634	0.0011093773292323611	0.1194453053145814	0.02724942083191465	1.8044032304893922e-13	12.743666404040265	-0.19676290065107027	
KEEPSQNDIS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	KEEPSQNDISPK	12	1	Q9NR30;Q9NR30-2	Q9NR30	DDX21	Nucleolar RNA helicase 2	1	KEEPS(0.24)QNDIS(0.76)PK	101.39	0.0055253	8009300.0	3081.7	2302.8	6063.7	4312.0	2974.4	2619.9	2399.6	3250.4	3254.0	4940.8	True	False	2946.2321579233912	2683.2985590926387	4791.01223536342	3933.973654811891	3365.5857350723504	3126.158596139721	2937.7713833920993	3136.0815896557406	3102.7222502457257	4045.973242669117	0.7281887400668449	0.6632022502755046	1.1841433316555505	0.972318257897489	0.8318358855117102	0.772659236391144	0.7260975807773904	0.7751117967322187	0.7668667250500324	1.0	11.982271063580473	-7.992640999655613	23.443609915411916	0.7904394569361722	0.8934411204374418	0.052430180575974705	0.14839471364094856	225.34055383579638	717853.6921880831	0.048714063697432204	0.055094885981239086	1.0170891006550232e-08	7.992640999655613	0.1030016635012696	
KEES(ph)S(ph)Y(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	KEESSYK	7	1	A0A1W2PP02;P35251-2;P35251	A0A1W2PP02	RFC1	Replication factor C subunit 1	3	KEES(1)S(1)Y(1)K	72.243	0.020082	11008000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
KEESEES(ph)DDDMGFGLFD	ddPTM_K562_Methotrexat_30min_R1	2	KEESEESDDDMGFGLFD	17	1	P05387;H0YDD8;P05386-2;P05386	P05387	RPLP2;RPLP1	60S acidic ribosomal protein P2;60S acidic ribosomal protein P1	1	KEES(0.082)EES(0.918)DDDMGFGLFD;KEES(0.35)EES(0.65)DDDMGFGLFD	67.227	0.014875	21845000.0	3367.1499999999996	2294.6	5566.3	3725.1400000000003	2621.16	2341.88	2390.7799999999997	3160.76	3452.0	4736.4	True	False	3219.13411771157	2673.7436484688083	4398.00969799024	3398.5627598529627	2965.8884835066706	2794.4151658947626	2926.973273873212	3049.594279264178	3291.5172734628923	3878.592063345611	0.8299749149011553	0.689359335759193	1.1339191196602891	0.8762361971424798	0.7646817285931181	0.7204715320033799	0.7546483945899821	0.786263218574641	0.8486371393808511	1.0	11.921317330926652														
KELSDIAHR	ddPTM_K562_Methotrexat_30min_R1	2	KELSDIAHR	9	1	H3BMQ8;H3BUH7;H3BR04;H3BPS8;H3BQN4;J3KPS3;P04075;P04075-2	H3BMQ8	ALDOA	Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A	0	;	59.757	0.027413999999999997	14527000.0	12496.3	9504.5	16441.2	14641.7	9851.400000000001	10078.5	9144.1	11237.400000000001	11841.8	15303.300000000001	False	True	11946.977614647138	11074.95707612298	12990.416802291855	13358.08489370577	11147.031774640847	12026.02748623771	11194.89719406388	10842.174272581049	11291.277302692015	12531.724077991083	0.9533387058552534	0.8837536644756999	1.0366025234394007	1.0659415105672483	0.889505043780679	0.9596466863931751	0.8933245836241309	0.865178183393192	0.9010154734034075	1.0	13.613297289633083	-7.811539063516598	24.999999450525554	0.9122079245460872	0.9813772133050872	0.23676715694652217	0.058038337058527845	162.68334366788866	81178.79525542722	0.018952170451288733	0.02148977242539171	1.5433375983846407e-08	7.811539063516598	0.06916928875899997	
KENQGS(ph)HES(ph)PT(ph)LNPMLT	ddPTM_K562_Methotrexat_30min_R1	1	KENQGSHESPTLNPMLT	17	1	P25445-7	P25445-7			3	KENQGS(1)HES(0.925)PT(0.925)LNPMLT(0.151)	62.792	0.020702	90464000.0	3829.9	4113.5	4175.1	3872.3	4546.9	4673.7	4566.0	5089.4	5145.3	3961.2	True	False	3661.542181792773	4793.185957455085	3298.80356611736	3532.821471133598	5144.897047740877	5576.826379166462	5590.041730525221	4910.40291730062	4906.096126056954	3243.788295187199	1.128785804926109	1.4776506730006778	1.0169601915796376	1.089103588040945	1.5860767040112784	1.7192325366734895	1.7233065853339298	1.513786496050366	1.5124587918811216	1.0	11.663463950256086	-7.768018931786515	24.999138750822368	1.5560454986517291	1.1880079616599026	0.3351035863714382	0.22244550856147402	158.85649099956063	603577.0813479483	0.06680596574154607	0.07750274479371412	1.7060080189963008e-08	7.768018931786515	-0.3680375369918265	
KEQSEVSVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	KEQSEVSVSPR	11	1	E9PI52;Q7L4I2	E9PI52	RSRC2	Arginine/serine-rich coiled-coil protein 2	1	KEQSEVSVS(1)PR;KEQSEVS(0.001)VS(0.999)PR	139.48	4.558e-05	43960000.0	3317.1	2576.0	4457.6	3158.2	2733.7	2437.39	2448.17	2868.0	3417.2	3436.1000000000004	True	False	3171.284255783391	3001.640215486644	3522.0106767082775	2881.325509421827	3093.229466099811	2908.3811216630393	2997.2344422733113	2767.1308144021236	3258.335117867148	2813.788993510233	1.1270511979034998	1.0667609484611937	1.2516967991670656	1.024001983115067	1.099311097326091	1.0336173495493	1.0651951689292196	0.9834180248711888	1.157988436724368	1.0	11.458298429359392	-7.322722484390586	24.999815827153434	1.0530057192340967	1.1403307368133044	0.32536540190576513	0.0633834606898268	275.00818391364174	112185.93183957039	0.016869097783999944	0.02502092187905884	4.756390637896684e-08	7.322722484390586	0.08732501757920774	
KET(ph)ESEAEDNLDDLEK	ddPTM_K562_Methotrexat_30min_R1	1	KETESEAEDNLDDLEK	16	1	A9Z1X7;Q8IYB3;Q8IYB3-2	A9Z1X7	SRRM1	Serine/arginine repetitive matrix protein 1	1	KET(0.881)ES(0.119)EAEDNLDDLEK	90.397	0.0084425	73072000.0	1940.0	1209.9	3181.2	2262.8	1021.8	1016.5	1162.2	1545.4	1555.6	2497.4	True	False	1854.719922890411	1409.8154102163394	2513.5095936702196	2064.4238372236414	1156.184610037965	1212.92423870225	1422.852934563384	1491.0474060589422	1483.2804955384922	2045.0966596992098	0.9069106411641202	0.6893637049036564	1.2290419534692816	1.009450495864227	0.5653447256659326	0.5930889539864806	0.6957387211089844	0.7290840748222842	0.725286254076935	1.0	10.997953317155835	-7.750293763311085	24.998237006919858	0.6971769916267451	0.9587647620945142	0.333339459531493	0.16510929079290507	244.08247334743703	547444.2302201006	0.04962851665543242	0.06346830959040164	1.77707696185734e-08	7.750293763311085	0.26158777046776915	
KETES(ph)EAEDNLDDLEK	ddPTM_K562_Methotrexat_30min_R1	2	KETESEAEDNLDDLEK	16	1	A9Z1X7;Q8IYB3;Q8IYB3-2	A9Z1X7	SRRM1	Serine/arginine repetitive matrix protein 1	1	KET(0.001)ES(0.999)EAEDNLDDLEK;KET(0.303)ES(0.697)EAEDNLDDLEK	131.86	4.3933e-05	110573000.0	8035.299999999999	4329.4	11118.3	7692.3	4149.3	3446.3	3401.13	5628.6	5745.3	8708.1	True	False	7682.077833196555	5044.759762782556	8784.72077055942	7017.928002066214	4695.005678636258	4112.248700284866	4163.919980495239	5430.638947679147	5478.202257018059	7130.978706785731	1.0772823968589902	0.7074428308111534	1.2319095501154718	0.9841465373312726	0.6583956945725503	0.5766738156673659	0.5839198449061298	0.7615559057147981	0.7682258610315418	1.0	12.799884380760002	-7.755117912332518	24.13419748251074	0.6984231356666064	0.9958355748404586	0.3926280232887144	0.16583557996598539	94.62047111141469	361239.8155872412	0.04869461968164343	0.061242880616961134	1.75744639689473e-08	7.755117912332518	0.2974124391738522	
KETQS(ph)PEQVK	ddPTM_K562_Methotrexat_30min_R1	2	KETQSPEQVK	10	1	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	KET(0.003)QS(0.997)PEQVK;KET(0.028)QS(0.972)PEQVK	120.6	0.0031371	37955000.0	7468.3	4633.1	11850.8	7787.7	5304.2	3832.9	4043.0	6516.4	5547.700000000001	8836.8	True	False	7140.002474289922	5398.641025765203	9363.4790307642	7104.964432184268	6001.795271641594	4573.553678821306	4949.74566721714	6287.214518469316	5289.788637888207	7236.369889657232	0.9866829063692494	0.7460427131400994	1.2939469891039141	0.9818409700614145	0.8293931022265478	0.6320232034238845	0.6840094885547091	0.8688354263724798	0.7310003107288329	1.0	12.821050438383455	-7.8195733236745255	4.045010099418445	0.766094997390875	1.0062301930700641	0.3057993156570331	0.15588108378990712	0.25782442102914793	8.531231365097229	0.04947020460633426	0.05838063837943524	1.515048990323192e-08	7.8195733236745255	0.24013519567918906	
KFDHESS(ph)PGTDEDKSG	ddPTM_K562_Methotrexat_30min_R1	1	KFDHESSPGTDEDKSG	16	2	Q13427;E9PG73	Q13427	PPIG	Peptidyl-prolyl cis-trans isomerase G	1	KFDHES(0.014)S(0.985)PGT(0.001)DEDKSG	104.68	0.0037827	7797300.0	2693.4	1990.4	4210.7	3140.9	2154.7	1731.1	1662.8	2540.8	2510.7	3943.0	True	False	2575.0013609860985	2319.27976898471	3326.9316126201447	2865.542173561844	2438.080817428857	2065.610575127856	2035.7252276647698	2451.438623860851	2393.978105006743	3228.884491548803	0.7974894635363511	0.7182913402616697	1.0303656328766073	0.8874712554945952	0.755084557471853	0.6397288538919031	0.6304732278262116	0.7592215299981098	0.7414257497512463	1.0	11.656820116307571	-7.853364540934469	5.456075292513616	0.7282507528705182	0.860253119076498	0.13289038418805565	0.12097406215223248	0.34050193022992153	15.995925523508998	0.03797856521735905	0.04353393738904087	1.401636695697977e-08	7.853364540934469	0.13200236620597983	
KFELLPTPPLS(ph)PSRR	ddPTM_K562_Methotrexat_30min_R1	2	KFELLPTPPLSPSRR	15	2	H0YBG3;A0A0B4J1R1;H0YBT0;A0A087WUS5;P01106;P01106-2	H0YBG3	MYC	Myc proto-oncogene protein	1	KFELLPTPPLS(0.5)PS(0.5)RR;KFELLPTPPLS(0.5)PS(0.5)RR	69.737	0.028422000000000003	27030000.0	7453.599999999999	5947.4	10697.400000000001	7091.299999999999	5902.0	5869.1	5395.6	7557.3	7258.9	9354.5	True	False	7125.9486686886385	6930.106761484959	8452.161928620591	6469.616738953517	6678.216449837613	7003.220510936919	6605.700648537428	7291.505475481587	6921.435323389272	7660.309403041664	0.9302429306392183	0.904677134677254	1.103370827980461	0.8445633718638882	0.8717946101740887	0.9142216250633641	0.8623281777514776	0.9518552178305439	0.9035451388740239	1.0	12.903186949034135														
KFELLPTPPLSPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	KFELLPTPPLSPSR	14	1	H0YBG3;A0A0B4J1R1;H0YBT0;A0A087WUS5;P01106;P01106-2;P04198	H0YBG3	MYC;MYCN	Myc proto-oncogene protein;N-myc proto-oncogene protein	1	KFELLPTPPLS(0.061)PS(0.939)R	108.47	0.0013927999999999998	6001800.0	3559.5	2480.5	4500.6	2947.6	2579.1	2402.2	2064.9	3473.9	3631.0	4306.2	True	False	3403.0286420249554	2890.360463709091	3555.9855643380492	2689.188484444232	2918.296856281971	2866.39115219926	2528.006388384042	3351.7209679747357	3462.195602532954	3526.3054520688443	0.9650408021314308	0.8196568626842433	1.0084167729292401	0.7626079252058312	0.8275791464888099	0.8128595753148894	0.7168994356121047	0.9504908220608961	0.9818195416116668	1.0	11.78394173240543	-9.500677774201966	23.37917554896592	0.9826583355570702	0.8442032693302393	0.3629316451104645	0.08160551571848847	351.51851777297327	370177.946229204	0.04565206265015918	0.021587870968084715	3.157346354990984e-10	9.500677774201966	-0.1384550662268309	
KFPDRLAEDEGDS(ph)EPEAVGQSR	ddPTM_K562_Methotrexat_30min_R1	1	KFPDRLAEDEGDSEPEAVGQSR	22	2	Q9UIG0-2;Q9UIG0	Q9UIG0-2	BAZ1B	Tyrosine-protein kinase BAZ1B	1	KFPDRLAEDEGDS(0.998)EPEAVGQS(0.002)R	57.248000000000005	0.013266	37345000.0	2661.6	2010.4	3546.1	3691.6	1733.9	1792.8	2263.4	2141.1	2684.8	3394.6	True	False	2544.5992509098537	2342.5844290428367	2801.822070323768	3367.963159578752	1961.9382416762871	2139.2332269015187	2771.0250663317543	2065.796299412966	2559.9842340072905	2779.805045653452	0.9153876653647457	0.8427153669304038	1.0079203484808197	1.2115825046238236	0.7057826752073875	0.7695623224536765	0.9968415125602329	0.743144308858306	0.9209222200708367	1.0	11.440767991520424	-7.787024857701932	24.999976426157037	0.8459154444244369	0.984532751559951	0.21388603496383907	0.1285175577877418	365.1059070707343	356748.5933990546	0.040757232901980044	0.04623031114862426	1.6329584796175363e-08	7.787024857701932	0.13861730713551412	
KFQEQECPPS(ph)PEPTR	ddPTM_K562_Methotrexat_30min_R1	2	KFQEQECPPSPEPTR	15	1	P62070-2;P62070-3;P62070;P62070-4	P62070-2	RRAS2	Ras-related protein R-Ras2	1	KFQEQECPPS(0.98)PEPT(0.02)R;KFQEQECPPS(0.951)PEPT(0.049)R	90.96799999999999	0.007645999999999999	43729000.0	5376.299999999999	4433.2	7791.200000000001	5851.5	4685.8	4600.1	4429.9	5180.9	5780.6	7477.6	True	False	5139.9642893998525	5165.71094848423	6155.933593047724	5338.50808003984	5302.064832370227	5489.004220810846	5423.417841010442	4998.684810437926	5511.861167722939	6123.334180574522	0.8394061368895589	0.8436108166155252	1.0053238009737602	0.8718302680548711	0.8658787314254929	0.8964077508988477	0.8856968574760343	0.8163338245192628	0.9001405125345925	1.0	12.580101704892783	-10.030259288356643	22.9485132219789	1.0000000032483602	0.8799589744898036	0.36260056127009355	0.04826803839738308	1452.3207101407652	1101433.1275158871	0.047622693409289006	0.012296126551942569	9.326972830066113e-11	10.030259288356643	-0.1200410287585566	
KGAGDGS(ph)DEEVDGK	ddPTM_K562_Methotrexat_30min_R1	1	KGAGDGSDEEVDGK	14	1	P35579;P35579-2	P35579	MYH9	Myosin-9	1	KGAGDGS(1)DEEVDGK	115.66	0.0011772	7904000.0	2447.8	2199.4	4609.8	2270.1	2095.8	1943.0	1626.2	2706.1	2198.1	3742.8	True	False	2340.197642912963	2562.8134665921275	3642.265976644344	2071.083857557623	2371.434435033831	2318.4572511544256	1990.9167459877606	2610.924929167919	2095.910810776007	3064.942651526468	0.7635371714858834	0.8361701206108181	1.1883634999925186	0.6757333147901275	0.7737288114845342	0.7564439256309536	0.6495771609286725	0.8518674657313964	0.6838336142218376	1.0	11.581644364407701														
KGAGDGS(ph)DEEVDGKADGAEAKPAE	ddPTM_K562_Methotrexat_30min_R1	2	KGAGDGSDEEVDGKADGAEAKPAE	24	3	P35579;P35579-2	P35579	MYH9	Myosin-9	1	KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE	63.893	0.005314800000000001	84834000.0	4919.4	2689.0	12349.0	5529.9	2400.96	1708.48	1847.6799999999998	3312.4	3237.9	7548.9	True	False	4703.149066323236	3133.311544815055	9757.113659070019	5045.102252723627	2716.728323856679	2038.6195802636703	2262.0692739064475	3195.901014513809	3087.3707357316043	6181.721059663393	0.7608154785585444	0.5068671838430817	1.5783814191708794	0.8161323042612898	0.4394776628767216	0.3297818779896026	0.36592871986197667	0.5169921100723093	0.4994354656144446	1.0	12.59379284100646	-7.661815980395396	5.003728690862033	0.4843344601583221	0.9473002791846883	0.27987007875433656	0.30630137213350983	0.25162366176962714	10.24653613464217	0.09204707561267296	0.11913349608104003	2.1786327087964156e-08	7.661815980395396	0.4629658190263662	
KGAILSEEELAAMS(ph)PTAAAVAK	ddPTM_K562_Methotrexat_30min_R1	1	KGAILSEEELAAMSPTAAAVAK	22	1	P12270;P12270-2	P12270	TPR	Nucleoprotein TPR	1	KGAILSEEELAAMS(0.656)PT(0.344)AAAVAK	87.963	0.00026279	7583400.0	1818.8	1176.9	2440.8	1684.3	1158.9	691.67	1152.0	1302.2	1383.3	1998.5	True	False	1738.8477297696277	1371.3627211204305	1928.509435505557	1536.6400340444504	1311.3156631170473	825.3254384487811	1410.365324915693	1256.4008879060138	1318.9906849308284	1636.552284139053	1.0625066773741296	0.837958392415106	1.17839769263473	0.9389495520168097	0.801267198014939	0.5043074067645588	0.8617905694700424	0.7677120371176979	0.8059569484666447	1.0	10.676443978620203	-7.699869006318236	3.8090064019821837	0.7663780641483764	1.013253587949403	0.3630039901357319	0.1399761430304903	0.22853727255381218	6.658204585523037	0.042121466971637746	0.05399182201775047	1.995864224937425e-08	7.699869006318236	0.2468755238010265	
KGDRSPEPGQT(ph)WTR	ddPTM_K562_Methotrexat_30min_R1	1	KGDRSPEPGQTWTR	14	2	Q09666;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q09666-2	Q09666	AHNAK	Neuroblast differentiation-associated protein AHNAK	1	KGDRS(0.063)PEPGQT(0.874)WT(0.063)R	80.508	0.029789999999999997	54145000.0	3367.5	2420.8	5005.6	3955.7	2543.8	2490.5	2421.0	3232.6	3409.5	3573.7	True	False	3219.4687321306487	2820.796053435583	3954.992965571375	3608.9099226204553	2878.3542875460744	2971.7538775090566	2963.970878143138	3118.907625744879	3250.993089186481	2926.4683001389703	1.1001208289109998	0.9638908623413521	1.3514559393599317	1.2331963146325822	0.9835590180181992	1.015474480747984	1.012814961297338	1.0657582129274288	1.1108929794428664	1.0	11.514944935966438	-7.767515551444142	24.998760724259185	1.0329773278401857	1.1615241907945064	0.3005891177778486	0.09768739985263526	207.1096036084503	852095.3574813475	0.03228823047162872	0.03754565723800253	1.7079865584879186e-08	7.767515551444142	0.12854686295432072	
KGDVEGSQS(ph)QDEGEGSGESER	ddPTM_K562_Methotrexat_30min_R1	2	KGDVEGSQSQDEGEGSGESER	21	1	Q9UQE7	Q9UQE7	SMC3	Structural maintenance of chromosomes protein 3	1	KGDVEGS(0.001)QS(0.999)QDEGEGSGESER;KGDVEGS(0.022)QS(0.977)QDEGEGS(0.001)GESER	134.63	1.6076e-09	67182000.0	4410.8	3245.2999999999997	6043.4	4384.0	3211.83	2473.5299999999997	2701.54	4212.1	3923.6	4886.3	True	False	4216.906513342795	3781.5306643318336	4774.972927947507	3999.6615265991036	3634.241941728556	2951.5046651816792	3307.429114472864	4063.958055558994	3741.192692398319	4001.3437207849142	1.0538726007061436	0.9450651901481831	1.1933423522563154	0.9995795926810604	0.9082553750257809	0.7376283746507796	0.8265796055691187	1.0156483269479777	0.9349840837128676	1.0	11.96626884810508	-7.668478703265993	3.904737722258867	0.8920462296159735	1.0576904692381397	0.3674692628472346	0.09419672258708758	0.2472483246811033	7.125400974834887	0.030317755504440363	0.039377520782031765	2.1454643215334927e-08	7.668478703265993	0.16564423962216623	
KGEMPVSGLAVGSTLPS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	KGEMPVSGLAVGSTLPSPR	19	1	Q3T8J9-3	Q3T8J9-3	GON4L	GON-4-like protein	1	KGEMPVS(0.002)GLAVGS(0.099)T(0.133)LPS(0.767)PR;KGEMPVS(0.006)GLAVGS(0.061)T(0.061)LPS(0.872)PR	56.461000000000006	0.018643	26130000.0	3596.2	2653.3999999999996	4093.3	4333.5	2669.5	2195.0	2380.9	3253.7	3353.3999999999996	4522.7	True	False	3438.115353968294	3091.8292499115896	3234.172268254219	3953.5887831927917	3020.586040806763	2619.1526846546376	2914.8774323713315	3139.2655267852847	3197.5011659416145	3703.595204140951	0.9283183405476315	0.8348183533812356	0.8732520942456468	1.0675002437556689	0.815582123399846	0.7071919419612032	0.7870399629830597	0.8476265233509604	0.8633506065583307	1.0	11.854710708073375														
KGGEFDEFVNDDT(ph)DDDLPISK	ddPTM_K562_Methotrexat_30min_R1	2	KGGEFDEFVNDDTDDDLPISK	21	1	Q6PD62	Q6PD62	CTR9	RNA polymerase-associated protein CTR9 homolog	1	KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(0.999)DDDLPIS(0.001)K	138.25	1.3515e-12	109063000.0	18568.6	10629.6	30572.0	18574.2	10404.3	9477.9	8813.8	14183.3	14967.699999999999	22276.9	True	False	17752.346577413857	12385.96072769287	24155.354991099593	16945.828724305888	11772.64781583285	11309.370036395534	10790.519011060709	13684.465299829026	14271.85489397755	18242.337542425455	0.9731399025003212	0.6789678515095638	1.324137048496251	0.9289285808299331	0.6453475487148337	0.6199518022344338	0.5915096673310447	0.7501486729978342	0.7823479233835073	1.0	14.155002985411288	-7.6718085792267035	5.712561156882203	0.7070902773510678	0.9856604393132133	0.3022855828807113	0.18106724049577558	0.24169104277770972	12.217633583720032	0.053764410154472905	0.06941466510805579	2.1290772568713454e-08	7.6718085792267035	0.27857016196214557	
KGGSTSS(ph)SPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	KGGSTSSSPSR	11	1	C9JXK0;A0A494C1L1;Q14739	C9JXK0	LBR	Lamin-B receptor	2	KGGS(0.128)T(0.184)S(0.268)S(0.394)S(0.029)PS(0.996)R	101.71	0.016105	34419000.0	0.0	100.04	156.85	61.138000000000005	204.98	116.07	123.14	62.815	116.33	189.16	True	False	0.0	116.56990961074679	123.92932848207411	55.77812646286859	231.93846287490928	138.49888478718177	150.75727960947788	60.60576084611906	110.92184369117557	154.9012910021232	0.0	0.7525431767327814	0.8000535546238633	0.36008819617974686	1.4973307283264032	0.8941105906295086	0.9732474057134325	0.3912540718933605	0.7160808213642015	1.0	7.275205357882835	-6.279868057307202	4.91659804820345	0.8182581390467193	1.2960712826091084e-11	0.39608209611673684	0.304684521520286	0.17025870013851577	11.891018828065137	0.07772458159738575	0.45332449611201775	5.249669258474697e-07	6.279868057307202	-0.8182581390337585	
KGHAVGDIPGVR	ddPTM_K562_Methotrexat_30min_R1	1	KGHAVGDIPGVR	12	1	D6RD47;P62266	D6RD47	RPS23	40S ribosomal protein S23	0		57.175	0.029749	9711000.0	10338.0	8248.2	13458.0	12077.0	8290.1	7767.5	7349.5	10770.0	9245.9	12409.0	False	True	9883.55389837168	9611.074854571785	10633.349714451722	11018.22816075214	9380.393458285122	9268.459443305203	8997.812461343656	10391.212995505883	8816.060127088802	10161.609854331502	0.9726366235325107	0.9458220687812527	1.0464237327434034	1.0842994681650264	0.9231208039626341	0.9121054218937973	0.885471159622236	1.0225951541601954	0.8675849844137498	1.0	13.310841358911244	-7.803597634428179	24.999861871859974	0.9326401447977173	1.009985283484026	0.3080060521540242	0.05653392956548031	181.26920301397922	107491.59755900092	0.017768331356291092	0.020147554099132357	1.571818389765989e-08	7.803597634428179	0.07734513868630866	
KGIVAT(ph)AGRGT(ph)DS(ph)T(ph)T(ph)HSAR	ddPTM_K562_Methotrexat_30min_R1	1	KGIVATAGRGTDSTTHSAR	19	2	H0YDD1	H0YDD1	UVRAG		5	KGIVAT(1)AGRGT(0.961)DS(0.952)T(0.952)T(0.622)HS(0.513)AR	44.74	0.029037	15907000.0	146.3	118.88	145.82	252.81	172.92	202.19	138.35	194.54	0.0	176.52	True	False	139.86882717467373	138.52289938550163	115.2143747482056	230.6465398128465	195.66201092950195	241.26035595003245	169.37850929000535	187.69791793367833	0.0	144.55051748622748	0.9676120819698911	0.9583009579934562	0.797052661946942	1.595611996579826	1.3535891419284907	1.6690383413744563	1.1717599648589527	1.2984935730275877	0.0	1.0	7.175429963401017	-9.737754326017226	24.997446124405656	0.49999976035675414	1.2326578086012423	0.4169790518528823	0.3435264722295671	190.5560785818879	201116.03030230326	0.23567281249140679	0.08896731436551086	1.829134638022413e-10	9.737754326017226	0.7326580482444882	
KGLEFPMT(ph)DLDMLS(ph)PIHTPQR	ddPTM_K562_Methotrexat_30min_R1	1	KGLEFPMTDLDMLSPIHTPQR	21	1	O60784-4;O60784;O60784-2;V9GYF4;B0QY02;B0QY01	O60784-4	TOM1	Target of Myb protein 1	2	KGLEFPMT(1)DLDMLS(0.591)PIHT(0.409)PQR	44.3	0.026838	1696900.0	0.0	0.0	0.0	60.825	0.0	0.0	0.0	0.0	0.0	57.022	True	False	0.0	0.0	0.0	55.49256668690473	0.0	0.0	0.0	0.0	0.0	46.69476324552266	0.0	0.0	0.0	1.1884109229791555	0.0	0.0	0.0	0.0	0.0	1.0	5.545188857598687	-12.520700011801424	3.1804811662342916	1.0256495396099574	0.13981304947899545	0.3504008821194108	0.3543922991903584	387670052.3424063	469980692.20104337	86336386.18611526	0.09253336236643701	3.0150879721065394e-13	12.520700011801424	-0.885836490130962	
KGLPLGSAVSS(ph)PVLFS(ph)PVGR	ddPTM_K562_Methotrexat_30min_R1	1	KGLPLGSAVSSPVLFSPVGR	20	1	Q8WUM0	Q8WUM0	NUP133	Nuclear pore complex protein Nup133	2	KGLPLGS(0.001)AVS(0.187)S(0.814)PVLFS(0.998)PVGR	74.277	0.013628999999999999	15850000.0	2169.3	2091.9	2557.0	2171.7	1677.0	1710.2	1503.7	2009.9	1970.1	2764.3	True	False	2073.9401694464786	2437.5509187797015	2020.3206434725128	1981.3104327817673	1897.55489433712	2040.6719459208941	1840.9430026699035	1939.2106777778358	1878.510481010789	2263.6584833853294	0.916189515630854	1.0768192007189679	0.8925024063042841	0.875269148294266	0.8382690711804296	0.9014928536698009	0.8132600461518164	0.8566710446876784	0.8298559587493309	1.0	11.144440600830345	-6.918615305013583	7.2807580763858235	0.866183349416241	0.9957798805240214	0.3841140716210183	0.06095568888990948	0.1884434404278665	14.193511845593257	0.014704593084990796	0.03092823822957459	1.2061038255942892e-07	6.918615305013583	0.12959653110778047	
KGLPLGSAVSSPVLFS(ph)PVGR	ddPTM_K562_Methotrexat_30min_R1	2	KGLPLGSAVSSPVLFSPVGR	20	1	Q8WUM0	Q8WUM0	NUP133	Nuclear pore complex protein Nup133	1	KGLPLGSAVS(0.003)S(0.258)PVLFS(0.739)PVGR;KGLPLGSAVS(0.001)S(0.109)PVLFS(0.89)PVGR	146.72	6.4451e-13	27825000.0	8112.2	5360.2	8107.900000000001	7629.6	5698.7	5438.200000000001	5061.799999999999	7149.5	7201.7	8334.2	True	False	7755.597401274012	6245.881942178379	6406.162591009301	6960.724813718186	6448.178936409625	6489.055184368497	6197.037501439457	6898.048032624822	6866.894538904319	6824.795619950813	1.136385297546816	0.915174942956518	0.9386599903859789	1.0199169618164117	0.9448164158293282	0.9508057890259964	0.9080180340234305	1.0107332756544198	1.006168524494776	1.0	12.73657012739811														
KGNSPNS(ph)EPPTPK	ddPTM_K562_Methotrexat_30min_R1	1	KGNSPNSEPPTPK	13	1	P48634-2;P48634-3;P48634;P48634-4	P48634-2	PRRC2A	Protein PRRC2A	1	KGNS(0.017)PNS(0.983)EPPTPK	99.238	0.0043234	5691000.0	3613.8	2581.5	6120.2	4161.3	2275.2	2229.4	2226.8	2761.5	3149.0	4549.6	True	False	3454.9416790419423	3008.048997002629	4835.653657481609	3796.4852898350446	2574.4286795443136	2660.199997799114	2726.216584654746	2664.3764797668982	3002.6036773275328	3725.623353474625	0.9273459368402774	0.8073948200365544	1.2979448534355298	1.0190201557262442	0.6910061579744303	0.7140281626477711	0.7317477710440581	0.7151491782662418	0.8059332338378266	1.0	11.863266115264626	-7.752498004630171	24.745928664543737	0.7567259301821055	1.0186041511667216	0.3962047214076774	0.14179817518280757	163.5248778315128	452564.82707760466	0.042528384478766994	0.054069423290714555	1.7680803411763856e-08	7.752498004630171	0.2618782209846161	
KGPGAGSALDDGRRDPSSNDINGGMEPTPSTVS(ph)TPSPSADLLGLR	ddPTM_K562_Methotrexat_30min_R1	1	KGPGAGSALDDGRRDPSSNDINGGMEPTPSTVSTPSPSADLLGLR	45	3	O95782-2;O95782	O95782-2	AP2A1	AP-2 complex subunit alpha-1	1	KGPGAGS(0.001)ALDDGRRDPS(0.051)S(0.051)NDINGGMEPT(0.101)PS(0.169)T(0.169)VS(0.204)T(0.204)PS(0.037)PS(0.011)ADLLGLR	41.06399999999999	0.00089177	33502000.0	415.41	323.11	662.26	471.65	469.67	400.03	307.45	548.6	402.7	436.86	True	False	397.14907379788957	376.4984355690566	523.2606763183833	430.3011767838654	531.4398373424655	477.33013596464485	376.40348884143225	529.3054270505598	383.9785648967284	357.7404207400484	1.1101599114137493	1.0524347089160457	1.4626825652967237	1.2028307449678524	1.4855459616307531	1.3342918727976119	1.0521693021514762	1.47957959560622	1.0733440859224177	1.0	8.482769326018477	-12.14326881562871	3.5860753618861607	0.9997998648940873	1.259666206274359	0.15978512585698046	0.17101648644925338	137634696.30151367	242846034.58015636	355111.8820908052	0.04163803485937238	7.190037978424537e-13	12.14326881562871	0.25986634138027176	
KGPGQPSS(ph)PQRLDR	ddPTM_K562_Methotrexat_30min_R1	1	KGPGQPSSPQRLDR	14	2	O95400	O95400	CD2BP2	CD2 antigen cytoplasmic tail-binding protein 2	1	KGPGQPS(0.121)S(0.879)PQRLDR	114.21	0.0027917	0.0	3146.1	2779.4	4725.4	3977.1	2497.8	2799.2	2465.7	3795.7	3357.7	4379.5	True	False	3007.801211033774	3238.648608277786	3733.603116411815	3628.4338178460957	2826.3044812613343	3340.105783546816	3018.695991010958	3662.20307957676	3201.601259880172	3586.330111777324	0.838684983614952	0.9030536808762334	1.0410650999892213	1.0117400531341232	0.7880770573740258	0.9313436519906743	0.8417228467334101	1.0211561583665356	0.8927235251897973	1.0	11.808292575072679	-10.61886460966699	0.8565438930711358	0.9998993419708337	0.9188922855672981	0.0810331271864978	0.0805045025462939	6.874955447435987	7.059423862302963	0.08973371571112032	0.027451577077251234	2.4051124715782826e-11	10.61886460966699	-0.08100705640353567	
KGSPGLAS(ph)GS(ph)VGQSPNS(ph)APK	ddPTM_K562_Methotrexat_30min_R1	1	KGSPGLASGSVGQSPNSAPK	20	1	A0A0A0MR54;Q14162-2;Q14162	A0A0A0MR54	SCARF1	Scavenger receptor class F member 1	3	KGS(0.023)PGLAS(0.979)GS(0.982)VGQS(0.231)PNS(0.786)APK	47.082	0.031501999999999995	0.0	652.08	439.87	595.24	719.37	365.02	658.02	624.87	459.04	334.98	597.0	True	False	623.4153439785459	512.5510409883965	470.3072584358931	656.3039489939769	413.0265280446841	785.1730521897247	765.0130039757547	442.89530301365136	319.4068529155851	488.8775149517212	1.275197416351028	1.0484242480225607	0.9620145006716826	1.342471128087758	0.8448466444309108	1.6060731536553976	1.5648357320162354	0.9059432873638895	0.6533473991887885	1.0	8.933329242464561	-9.500636527688682	23.45921767388685	0.8109974825568862	1.2216499646437688	0.34605070008864924	0.24145324762218898	375.3047095321079	395844.25636728207	0.13885538864822083	0.06567771655434035	3.157646233801745e-10	9.500636527688682	0.41065248208688265	
KGT(ph)Y(ph)LTDETHREVK	ddPTM_K562_Methotrexat_30min_R1	1	KGTYLTDETHREVK	14	2	P15529-15;P15529-12;P15529-14;P15529-11;P15529-13;P15529-10;P15529	P15529-15	CD46	Membrane cofactor protein	2	KGT(0.999)Y(0.999)LT(0.002)DETHREVK	76.574	0.020305	4825200.0	4536.2	3295.3	5477.5	4849.9	3433.9	3632.0	3452.2	4003.7	3807.8	5331.5	True	False	4336.794079492515	3839.7923144771466	4327.847604466441	4424.716796955518	3885.518039155775	4333.832597114188	4226.443728015586	3862.8876016812374	3630.7762091228246	4365.91368670871	0.9933302375388583	0.8794934096307833	0.9912810731100447	1.013468683640225	0.8899667556380194	0.9926519184993996	0.9680548062327213	0.8847833188826314	0.831618870564508	1.0	12.092067893463488	-9.261181663700018	24.998328436769224	0.8936508177016831	0.9596770200710364	0.15681583634175733	0.05719100112924258	36.00614881465523	3493056.2822586955	0.02777920455589828	0.014736939389833658	5.480476707493504e-10	9.261181663700018	0.0660262023693533	
KGTENGVNGTLTSNVADS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	5	KGTENGVNGTLTSNVADSPR	20	1	G3XAN4;Q15629-2;Q15629	G3XAN4	TRAM1	Translocating chain-associated membrane protein 1	1	KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLT(0.017)S(0.017)NVADS(0.966)PR;KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTS(0.001)NVADS(0.999)PR;KGTENGVNGTLTSNVADS(1)PR	183.1	4.2609000000000004e-16	865924000.0	26364.5	20751.8	38009.799999999996	28481.9	20884.199999999997	19687.6	18513.7	26550.2	26331.800000000003	32492.199999999997	True	False	25205.548147960944	24180.68222971107	30032.062414650558	25984.936048002506	23630.83835677714	23491.950065788908	22665.868503378184	25616.41441720337	25107.640365402716	26607.547724144562	0.9473082002626121	0.9087903357500595	1.1287046339636357	0.9766001856842644	0.8881253771212347	0.8829054939351492	0.8518586056245397	0.9627499190373788	0.9436285006685986	1.0	14.699547930524217	-7.635728345600713	6.073556342857255	0.9146425918860996	0.996672744239992	0.20458701441614757	0.06614489718583329	0.31413768019209104	15.55143771543525	0.02031475504133618	0.02629614832580063	2.313511456145278e-08	7.635728345600713	0.08203015235389233	
KGVDLLLEGVQGESS(ph)PTRR	ddPTM_K562_Methotrexat_30min_R1	1	KGVDLLLEGVQGESSPTRR	19	2	F5H7T0;F6RJM5;Q96S38-2;Q96S38	F5H7T0	RPS6KC1	Ribosomal protein S6 kinase delta-1	1	KGVDLLLEGVQGES(0.396)S(0.591)PT(0.013)RR	89.20100000000001	0.010128	24975000.0	2165.1	1674.6	3567.3	2835.3	1939.5	1659.5	1624.2	2323.8	2052.7	2835.2	True	False	2069.924796417539	1951.2991866668995	2818.5724800389085	2586.7336510872356	2194.5782454185123	1980.1748884666856	1988.4681950764493	2242.070636857622	1957.270425039767	2321.717806350284	0.8915488311094272	0.8404549344152731	1.2140030421998937	1.1141464496727764	0.9452390120005008	0.8528921486713753	0.8564642049251888	0.9656947242792326	0.8430268397331955	1.0	11.180976914867411	-7.991996302158785	24.406302628813144	0.8985846492627527	1.0183939761482605	0.19026703764178687	0.10812995814116856	242.11087972773822	738279.3762615194	0.03607695701923543	0.040831388349165505	1.0186000609832193e-08	7.991996302158785	0.11980932688550783	
KHDSGAADLER	ddPTM_K562_Methotrexat_30min_R1	1	KHDSGAADLER	11	1	J3QT56;Q9NX55-3;Q9NX55	J3QT56	HYPK	Huntingtin-interacting protein K	0		64.64	0.023507	2310700.0	4087.1	2802.5	5535.0	4634.8	3179.9	2972.0	2981.9	3837.9	4360.3	5993.1	False	True	3907.4359777553586	3265.5654906449217	4373.27914025043	4228.474279991225	3598.112587061783	3546.2969379469623	3650.66698122058	3702.91888165757	4157.590604716177	4907.691515673631	0.7961861427671708	0.6653974644118782	0.8911071786569194	0.8616014813658929	0.7331578554948975	0.7225998061657297	0.7438664328353752	0.754513373514127	0.8471580969256387	1.0	12.260828852571862	-10.089590055982072	3.1858237437255337	0.9998338300738142	0.7710906191389447	0.5534797381349235	0.0627224630615546	0.29377044371290884	6.778557011867053	0.06364436197626493	0.016928183578681734	8.135981343058487e-11	10.089590055982072	-0.2287432109348695	
KHLEINPDHPIVETLR	ddPTM_K562_Methotrexat_30min_R1	2	KHLEINPDHPIVETLR	16	1	P08238	P08238	HSP90AB1	Heat shock protein HSP 90-beta	0	;	67.902	0.018189	118097000.0	9504.2	7194.4	11244.0	11242.099999999999	7433.8	6947.700000000001	7222.9	9951.0	10787.0	13116.8	False	True	9086.406748007748	8383.152316109128	8884.038058351553	10256.522547486253	8411.474999119428	8290.24469575172	8842.819188657599	9601.017689719502	10285.514724462402	10741.220415609263	0.8459380216053736	0.7804655329413627	0.8270976401751489	0.95487497236174	0.7831023546352123	0.7718158994022917	0.8232601926506521	0.8938479351719841	0.957574123468817	1.0	13.39087030094717	-9.662931365387665	1.9904993683096706	0.9948209135367921	0.8261370321658865	0.6074668328473773	0.04924059964025231	0.23551889897463377	1.7190739334511596	0.047910630682007245	0.014456167459645796	2.173044573250283e-10	9.662931365387665	-0.16868388137090562	
KHLEINPDHSIIETLR	ddPTM_K562_Methotrexat_30min_R1	2	KHLEINPDHSIIETLR	16	1	P07900;P07900-2	P07900	HSP90AA1	Heat shock protein HSP 90-alpha	0	;	95.755	0.001454	37786000.0	7920.299999999999	4999.8	8639.7	8408.9	5660.1	5370.5	5149.700000000001	8030.4	8180.3	10653.7	False	True	7572.133095499445	5825.931967930945	6826.345038486301	7671.704792659483	6404.502359831562	6408.2731175115	6304.6513139916215	7747.966280325947	7799.999638501876	8724.211693536263	0.867944676435306	0.6677889272502817	0.7824598116462391	0.8793579365277693	0.7341067118507263	0.7345389294323711	0.7226614318245757	0.8880992979648107	0.8940635455098903	1.0	13.090809062149868	-9.711174732475554	1.6585333112119751	0.9851924124593732	0.7687147981150567	0.5619220067027801	0.06518524992910354	0.25957179478072573	1.3632165777238707	0.06060986444451657	0.018405754010380432	1.9445775498944708e-10	9.711174732475554	-0.21647761434431645	
KHS(ph)PSPPPPTPTESR	ddPTM_K562_Methotrexat_30min_R1	2	KHSPSPPPPTPTESR	15	1	Q92922	Q92922	SMARCC1	SWI/SNF complex subunit SMARCC1	1	KHS(0.965)PS(0.035)PPPPTPTESR;KHS(0.933)PS(0.067)PPPPTPTESR	142.4	1.9707e-06	17579200.0	1959.78	1359.96	2414.5	2313.23	1308.67	1287.06	1411.65	1680.63	1728.49	1995.69	True	False	1873.6304177743145	1584.670274632459	1907.7294460947899	2110.432717421268	1480.7830432749909	1535.7661295269238	1728.248446976769	1621.5212903098477	1648.132877174935	1634.2512023685103	1.1464763893450856	0.9696613790681665	1.1673416200214075	1.291375961273659	0.9060926748157817	0.9397368821275134	1.0575170111375956	0.9922105536528207	1.0084942111630733	1.0	10.674414043272247	-7.7822829929236566	24.999993175681023	0.9850809330379113	1.1329693204228672	0.473701175972011	0.0821522659440291	242.58256695051216	290953.8963565555	0.02707146241260382	0.030727263322213403	1.6508857053044075e-08	7.7822829929236566	0.1478883873849559	
KICTLPSPPS(ph)PLASLAPVADSSTR	ddPTM_K562_Methotrexat_30min_R1	2	KICTLPSPPSPLASLAPVADSSTR	24	1	Q9UER7-2;Q9UER7;Q9UER7-3	Q9UER7-2	DAXX	Death domain-associated protein 6	1	KICTLPSPPS(0.988)PLAS(0.012)LAPVADSSTR;KICTLPS(0.001)PPS(0.99)PLAS(0.008)LAPVADS(0.001)S(0.001)T(0.001)R	95.891	7.2267e-06	26071000.0	4245.4	2949.1000000000004	4580.4	3913.0	3078.0	2884.8	3076.5	4325.8	4739.7	5888.7	True	False	4058.777299298428	3436.388648870984	3619.03663486957	3569.9533653244266	3482.810950965803	3442.246772069111	3766.483439325634	4173.659162113219	4519.352381527249	4822.199367330317	0.841685917591056	0.7126185350510403	0.7504950250269627	0.7403164185849157	0.7222453253511932	0.7138333589834176	0.7810716962145944	0.86550945827523	0.9371973320193249	1.0	12.235475583116612	-9.567090525787997	1.4761478520948033	0.9932221759580258	0.7435218966822729	0.8616879082970292	0.035653741747901896	0.13324421074973838	0.5230562604176948	0.03201294265245508	0.010394269052124233	2.709626769395183e-10	9.567090525787997	-0.2497002792757529	
KIDT(ph)HPSPSHSSTVK	ddPTM_K562_Methotrexat_30min_R1	1	KIDTHPSPSHSSTVK	15	1	H7C477;H0Y7U4;A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y594	H7C477	THOC2	THO complex subunit 2	1	KIDT(0.932)HPS(0.033)PS(0.033)HSSTVK	90.444	0.030775	57345000.0	9344.9	6721.5	14859.0	9478.3	6731.1	5663.8	4787.7	8039.6	8834.1	11104.0	True	False	8934.109385267322	7832.113629034737	11740.298960249533	8647.352155010101	7616.357632243644	6758.249191502028	5861.463599044149	7756.842711111343	8423.404619205834	9092.958000040047	0.9825305896307862	0.8613383707480274	1.2911418880630292	0.9509944019286152	0.8376105588753516	0.7432398996533651	0.6446157124027554	0.8530604354575464	0.9263657238017304	1.0	13.150533973778016	-7.665346920338002	3.8832927929704883	0.8120212547163432	1.038828660725442	0.3207098630809023	0.1353425277489994	0.25232297629253386	7.179662967611505	0.04221836275707161	0.05491059482828693	2.160991604595094e-08	7.665346920338002	0.22680740600909877	
KIEEAMDGSET(ph)PQLFTVLPEKR	ddPTM_K562_Methotrexat_30min_R1	1	KIEEAMDGSETPQLFTVLPEKR	22	2	E9PPJ0;Q13435	E9PPJ0	SF3B2	Splicing factor 3B subunit 2	1	KIEEAMDGS(0.179)ET(0.821)PQLFTVLPEKR	59.792	0.0066823	15725000.0	1388.1	1080.1	1234.3	1368.2	925.04	884.87	799.91	1404.2	1488.3	1717.6	True	False	1327.0807860640089	1258.5681664391002	975.237297707517	1248.2520302675398	1046.6989740355452	1055.8586041322787	979.3101797337779	1354.8134900918628	1419.1092578490218	1406.5259961157055	0.9435167140379244	0.8948061890891394	0.6933659956522344	0.8874717095274038	0.7441732160842623	0.7506854527027315	0.6962616989933093	0.9632338782456541	1.0089463413886886	1.0	10.457920502171167	-9.408816878271306	6.033994725832747	0.9985602280756101	0.8004521633824672	0.5388073140980144	0.0807244524944654	0.1862011160162769	8.533151711773677	0.04735416941429649	0.022162167349380694	3.9010644169555035e-10	9.408816878271306	-0.1981080646931429	
KIMLLS(ph)DPEMES(ph)SILISSDEGAT(ph)YQK	ddPTM_K562_Methotrexat_30min_R1	1	KIMLLSDPEMESSILISSDEGATYQK	26	1	Q9UPU3	Q9UPU3	SORCS3	VPS10 domain-containing receptor SorCS3	3	KIMLLS(0.977)DPEMES(0.944)S(0.067)ILIS(0.287)S(0.07)DEGAT(0.34)Y(0.314)QK	44.632	0.026216000000000003	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	134.54	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	110.17350228074464	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	6.783633474256385														
KIPEPSPVT(ph)RR	ddPTM_K562_Methotrexat_30min_R1	1	KIPEPSPVTRR	11	2	A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YI78;H0YHT2;Q7Z4S6-3	A0A1B0GV47	KIF21A	Kinesin-like protein KIF21A	1	KIPEPS(0.264)PVT(0.736)RR	85.90899999999999	0.01871	33257000.0	4408.3	3600.6	6033.8	4332.5	3359.5	3290.4	3056.7	4361.9	3737.3	4936.0	True	False	4214.51641034938	4195.5379502644455	4767.387836755749	3952.676451640193	3801.3331350778494	3926.2232317027924	3742.242785303644	4208.489504651546	3563.5537387348977	4042.0425691820674	1.0426699714847916	1.0379747067120668	1.1794501802390616	0.9778908519610277	0.9404485653022385	0.9713463340632972	0.9258296322349	1.041178917000659	0.8816220209813389	1.0	11.980868800349173	-7.440713610022212	9.565862336106203	0.9608127635565621	1.0816851075149991	0.5285781289077	0.05385839117179369	0.35163128604703076	39.04188598794443	0.014463597379976633	0.021452581065883703	3.6248195373857977e-08	7.440713610022212	0.12087234395843705	
KIT(ph)GPS(ph)QR	ddPTM_K562_Methotrexat_30min_R1	1	KITGPSQR	8	1	A0A0G2JN69;A0A0G2JQ13;E7EST5;A0A0G2JPG6;A0A0G2JMD1;A0A0G2JNI1;A8MT18;A0A1W2PQV0;A0A0C4ZNX8;Q86U48;K7QUT1;A0A0G2JMV5;A0A5K1V8C4;A0A5K1U1N8;A0A0G2JPS9;A0A0G2JPE3;A0A0G2JNE8;A0A0G2JPN7;A0A0G2JNZ6;A0A0G2JMQ9;Q8N736;A0A0G2JLZ7;A0A0G2JLN0;A0A0G2JLM4;Q99706-3;Q99706-2;Q99706;Q99706-4;Q99706-5;Q99706-6	A0A0G2JN69	KIR2DL4	Killer cell immunoglobulin-like receptor 2DL4	2	KIT(1)GPS(1)QR	70.808	0.023291	23519000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	153.96	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	126.07635209709711	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	6.9781538872358695														
KIVEPEVVGES(ph)DS(ph)EVEGDAWR	ddPTM_K562_Methotrexat_30min_R1	3	KIVEPEVVGESDSEVEGDAWR	21	1	P55081	P55081	MFAP1	Microfibrillar-associated protein 1	2	KIVEPEVVGES(1)DS(1)EVEGDAWR;KIVEPEVVGES(1)DS(1)EVEGDAWR;KIVEPEVVGES(1)DS(1)EVEGDAWR	104.01	0.00014203	85865000.0	9062.199999999999	6559.9	9913.5	10039.1	6552.1	6715.6	6581.599999999999	8297.1	7887.7	11049.5	True	False	8663.836538771893	7643.811975765074	7832.791825993251	9158.987689708263	7413.815994744335	8013.294655611252	8057.691338945422	8005.286290158951	7521.00254863651	9048.328478155849	0.957506854408283	0.8447761367437634	0.8656617456918034	1.0122297960136575	0.8193575214076837	0.8856104942428495	0.8905171113535514	0.884725428512573	0.8312035274574133	1.0	13.143435588570345														
KIVEPEVVGES(ph)DSEVEGDAWR	ddPTM_K562_Methotrexat_30min_R1	3	KIVEPEVVGESDSEVEGDAWR	21	1	P55081	P55081	MFAP1	Microfibrillar-associated protein 1	1	KIVEPEVVGES(0.917)DS(0.083)EVEGDAWR;KIVEPEVVGES(0.925)DS(0.075)EVEGDAWR;KIVEPEVVGES(0.94)DS(0.06)EVEGDAWR	115.92	1.2563e-05	184492000.0	13691.2	13326.400000000001	28029.8	17090.3	14732.499999999998	14571.899999999998	11955.099999999999	17185.7	14520.300000000001	17959.0	True	False	13089.351241379989	15528.361089930584	22146.728029881026	15592.01993340252	16670.081980215626	17387.713442149863	14636.33549991284	16581.269190052502	13845.254422324217	14706.451073731927	0.8900414638280518	1.055887719754953	1.505919267595336	1.060216353709724	1.133521737952881	1.1823187902353343	0.9952323253606491	1.127482701769518	0.9414408923614518	1.0	13.844161520360197	-9.167619452232444	1.1143365468387512	0.991101566662328	1.1471060942999876	0.11507763186020115	0.15342093299273557	1.1795562450783952	2.6232757889014438	0.13362865294180423	0.05528032054034024	6.797990412881643e-10	9.167619452232444	0.1560045276376596	
KIY(ph)S(ph)VTCS(ph)GS(ph)TLGMVIYRGK	ddPTM_K562_Methotrexat_30min_R1	1	KIYSVTCSGSTLGMVIYRGK	20	2	Q5VTL7	Q5VTL7	FNDC7	Fibronectin type III domain-containing protein 7	4	KIY(0.902)S(0.583)VT(0.583)CS(0.821)GS(0.523)T(0.523)LGMVIY(0.065)RGK	40.844	0.033923	86820000.0	754.05	785.84	839.62	906.17	829.6	694.65	1066.7	1038.2	782.07	977.7	True	False	720.9028648739763	915.6867030038914	663.3952360861914	826.7274830196875	938.7069411699912	828.881281273506	1305.9346285482384	1001.6859175426378	745.7117364012524	800.6290558932963	0.9004205625158508	1.1437090576012388	0.8285925063586567	1.0325974019232567	1.1724617464983649	1.0352875344358912	1.6311356912860862	1.2511236135753452	0.9314072864483163	1.0	9.644990163772114	-7.8194684236527285	2.0470090257350027	1.2112713512551088	0.9700944199503634	0.1798759061886238	0.19679325898267647	0.509912085701209	4.391404454572363	0.06971671116570193	0.08664969143422872	1.515414981313615e-08	7.8194684236527285	-0.24117693130474538	
KKEEPSQNDIS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	KKEEPSQNDISPK	13	2	Q9NR30;Q9NR30-2	Q9NR30	DDX21	Nucleolar RNA helicase 2	1	KKEEPSQNDIS(1)PK	82.94200000000001	0.018308	177190000.0	8923.6	4902.4	18989.0	10191.0	5486.9	3965.0	3526.9	7139.1	6088.4	12601.0	True	False	8531.329228816941	5712.438273447874	15003.468400038919	9297.570852548226	6208.523523994239	4731.180134239474	4317.897104553087	6888.013806519597	5805.351612905985	10318.836793813462	0.8267723774768684	0.5535932380355797	1.4539883418869533	0.9010289665713558	0.601668933044516	0.45849936662202057	0.41844804708432176	0.6675184368309057	0.562597483505749	1.0	13.332992729537422	-7.747182278942591	5.379213132844946	0.581997191615429	0.9473375230377313	0.26307145654669006	0.2552184330409451	0.22027180651193143	18.688354243644746	0.07832113145637304	0.09707565116976005	1.789854471575055e-08	7.747182278942591	0.3653403314223024	
KKEPAITSQNS(ph)PEAR	ddPTM_K562_Methotrexat_30min_R1	3	KKEPAITSQNSPEAR	15	2	A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193;E5RIS7	A0A1W2PRL9	TCEA1	Transcription elongation factor A protein 1	1	KKEPAITSQNS(1)PEAR;KKEPAITSQNS(1)PEAR;KKEPAITSQNS(1)PEAR	116.61	0.0032321	265970000.0	11578.7	7719.3	18520.800000000003	10237.5	8146.7	7204.8	6063.6	10552.6	10751.9	13487.5	True	False	11069.71421194392	8994.783119334641	14633.537181707365	9339.994269744142	9218.133844780094	8597.025632072773	7423.516652915621	10181.459076729387	10252.04651580117	11044.783053452824	1.0022572791489373	0.8143920143839031	1.3249275346456555	0.8456475989199507	0.8346142971000519	0.7783788590926798	0.6721287884957485	0.9218342295593082	0.9282252504358763	1.0	13.431077460462497	-7.464793283780976	24.999928554678952	0.8390056391108381	1.0341415939773604	0.26916916479554986	0.1435777221609571	350.4568828733075	150835.8087398368	0.04021189602374334	0.05964371593287153	3.4293097656950055e-08	7.464793283780976	0.19513595486652224	
KKEPAITSQNS(ph)PEAREESTSSGNVSNR	ddPTM_K562_Methotrexat_30min_R1	3	KKEPAITSQNSPEAREESTSSGNVSNR	27	3	A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193	A0A1W2PRL9	TCEA1	Transcription elongation factor A protein 1	1	KKEPAIT(0.008)S(0.022)QNS(0.968)PEAREESTSSGNVSNR;KKEPAIT(0.01)S(0.046)QNS(0.882)PEAREES(0.019)T(0.019)S(0.01)S(0.012)GNVS(0.001)NR;KKEPAIT(0.045)S(0.197)QNS(0.754)PEAREES(0.001)T(0.001)SSGNVSNR	50.945	0.0095196	81951000.0	5823.6	3939.13	8646.599999999999	5473.400000000001	4050.4300000000003	3475.4300000000003	3061.7	4752.5	4590.1	6775.799999999999	True	False	5567.60151698175	4590.004278738315	6831.796822780376	4993.555520001716	4583.132540649912	4147.007660514473	3748.3641625819237	4585.351881257355	4376.707252874279	5548.636961155559	1.0034178764909214	0.827230959760323	1.2312567700153851	0.8999607570219836	0.8259925045979992	0.7473921414478011	0.6755468394892589	0.8263924840205097	0.7887896223008228	1.0	12.437917697405254	-7.612885797742566	3.7467985536289183	0.7921338674771001	1.009507332246768	0.3672580898220328	0.1205376027983894	0.2284117376283082	6.204752614189366	0.035865627323906295	0.04772744017514103	2.438451950407073e-08	7.612885797742566	0.2173734647696679	
KKS(ph)VT(ph)EMQTNPPAEK	ddPTM_K562_Methotrexat_30min_R1	1	KKSVTEMQTNPPAEK	15	2	O15055	O15055	PER2	Period circadian protein homolog 2	2	KKS(1)VT(0.985)EMQT(0.015)NPPAEK	46.282	0.033058	208200000.0	1736.7	1542.7	1508.8	1924.5	1573.4	1738.7	2109.0	1641.2	1883.7	1603.1	True	False	1660.3567474658628	1797.6049535835577	1192.1234989719696	1755.7820729790092	1780.3296784436643	2074.6791675667514	2581.996935978471	1583.4780657589856	1796.1271981523892	1312.7630556433899	1.2647802208694212	1.3693293285912476	0.9081025656893624	1.3374706619226835	1.3561698516653626	1.5803911899013214	1.9668415597763946	1.2062177244795462	1.368203645304522	1.0	10.358390828237829	-7.7223995438932285	2.7661669132480644	1.4663224765641474	1.1945123062103558	0.11367709473683185	0.26262030109706397	0.4907837625807167	7.674251053359171	0.08569214715717278	0.11021603255613911	1.8949617848780864e-08	7.7223995438932285	-0.2718101703537916	
KKTEFLDLDNSPLSPPS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	KKTEFLDLDNSPLSPPSPR	19	2	Q8NCF5	Q8NCF5	NFATC2IP	NFATC2-interacting protein	1	KKTEFLDLDNSPLSPPS(1)PR;KKTEFLDLDNSPLS(0.157)PPS(0.843)PR	94.456	0.00085193	85263000.0	6623.900000000001	4738.6	9686.7	7454.0	4466.2	3716.0	3983.0	5812.6	5642.1	9200.2	True	False	6332.721287233916	5521.573107571822	7653.594046587872	6800.519393081593	5053.583583236999	4434.0644082809295	4876.289139877781	5608.167563386959	5379.800002492751	7533.954628239237	0.8405573964431929	0.7328917388054766	1.0158800290487808	0.9026493692424777	0.6707743585679218	0.5885440817045664	0.6472416387537259	0.7443856301398574	0.7140738520415096	1.0	12.879191629626268	-7.760715153713394	24.999506416345458	0.7037614911083234	0.8731934014579827	0.2413633384900168	0.12208539295139469	24.322186729568315	839551.9650189617	0.03652493250506307	0.04440180406321495	1.7349415430053634e-08	7.760715153713394	0.16943191034965932	
KLDELYGTWR	ddPTM_K562_Methotrexat_30min_R1	2	KLDELYGTWR	10	1	H3BM89;P36578	H3BM89	RPL4	60S ribosomal protein L4	0	;	100.69	0.008106100000000001	36287000.0	7139.5	4586.200000000001	7857.7	7120.3	5156.6	4481.4	4795.4	7049.5	7005.4	9315.8	False	True	6825.656128595922	5343.991597928897	6208.476151823995	6496.074353978917	5834.783284519259	5347.367125745467	5870.890520052704	6801.56508930536	6679.720483058207	7628.618348052336	0.8947434276009603	0.7005189346368694	0.8138401829223875	0.8515400899086046	0.7648545278200919	0.7009614168351606	0.7695876569250056	0.8915854456189788	0.875613404459224	1.0	12.897206072664222	-9.833829975416775	1.3363295855820003	0.9910360821918403	0.7829752629888954	0.5365680084795416	0.061217165911286155	0.30957956497552974	1.1791014245191134	0.058042579013818006	0.018052102271688488	1.466121709503493e-10	9.833829975416775	-0.20806081920294484	
KLEKEEEEGISQES(ph)S(ph)EEEQ	ddPTM_K562_Methotrexat_30min_R1	1	KLEKEEEEGISQESSEEEQ	19	2	P17096;P17096-2	P17096	HMGA1	High mobility group protein HMG-I/HMG-Y	2	KLEKEEEEGIS(0.007)QES(0.996)S(0.996)EEEQ	71.697	0.028307	73503000.0	3151.3	2059.2	5838.7	3466.6	1966.2	1908.4	1692.3	1997.1	2458.6	4215.1	True	False	3012.7726252600773	2399.447799584664	4613.236660556494	3162.6885602437155	2224.7897634142178	2277.1712908405066	2071.8413536066223	1926.8608610329447	2344.300222634956	3451.704544845893	0.872836184591398	0.695148663047518	1.3365097158866068	0.9162686200840283	0.6445481455637007	0.6597236991911122	0.6002371659243863	0.5582345869985151	0.6791717518625631	1.0	11.753093264263537	-7.714306619912787	5.426602456402209	0.6618272013185589	0.9682768427949201	0.31972778261817225	0.18704989743070455	0.21118715727605158	13.956514100148643	0.05607225247679057	0.07148119966022604	1.9306047931519775e-08	7.714306619912787	0.3064496414763612	
KLGPGRPLPTFPTSECTS(ph)DVEPDTR	ddPTM_K562_Methotrexat_30min_R1	2	KLGPGRPLPTFPTSECTSDVEPDTR	25	2	Q8TDD1-2;Q8TDD1;H0YHZ9	Q8TDD1-2	DDX54	ATP-dependent RNA helicase DDX54	1	KLGPGRPLPTFPTSECT(0.268)S(0.726)DVEPDT(0.006)R;KLGPGRPLPTFPTSECT(0.065)S(0.935)DVEPDTR	103.14	3.2467e-07	189986000.0	4804.8	3480.0	6193.9	5191.700000000001	3367.2	3852.3999999999996	3197.7	3832.2999999999997	4203.5	4741.5	True	False	4593.5867451050735	4055.010850113943	4893.885034651701	4736.551721634254	3810.045820042904	4596.821777842156	3914.865624551141	3697.5158368316806	4008.080202491676	3882.768403925601	1.18306998183585	1.0443607313828451	1.2604112647315842	1.2198903537088257	0.981270429673536	1.1839031586830222	1.0082665812859424	0.9522885354412012	1.0322738277254397	1.0	11.92286994182541	-8.594523919044686	1.0551898879886374	0.9858785698121013	1.159817767897382	0.4179666090648809	0.08154805925400473	0.5206583765290612	1.1810323143495363	0.05380405250956368	0.03554770052396574	2.5437596900896176e-09	8.594523919044686	0.1739391980852807	
KLLAS(ph)QS(ph)SGLR	ddPTM_K562_Methotrexat_30min_R1	1	KLLASQSSGLR	11	1	F6XZD3;Q8N283	F6XZD3	ANKRD35	Ankyrin repeat domain-containing protein 35	2	KLLAS(1)QS(0.5)S(0.5)GLR	49.3	0.033773000000000004	20099000.0	1307.1	1619.4	1328.1	1121.5	1482.4	1762.1	1496.0	1599.5	1383.2	1650.0	True	False	1249.6414490773486	1886.9783249064715	1049.349959560361	1023.179836241079	1677.3615834021155	2102.600886391772	1831.5160816613525	1543.2446783947698	1318.8953339090012	1351.1690111730977	0.9248594652066495	1.3965523996647755	0.776623761263815	0.7572552565816653	1.241415078004057	1.5561346278703312	1.3555048010398143	1.1421551749879981	0.9761142558797465	1.0	10.399992430332933	-7.835918689462446	15.260368546503125	1.2434709627841578	0.9813766735641143	0.21298589122796718	0.22782789379957824	2.6030531946648323	530.3293836626566	0.07514637014196131	0.08521223298055361	1.459087411515644e-08	7.835918689462446	-0.2620942892200435	
KLLLDPSS(ph)PPTK	ddPTM_K562_Methotrexat_30min_R1	2	KLLLDPSSPPTK	12	1	F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479	F5GX19	LAMTOR1	Ragulator complex protein LAMTOR1	1	KLLLDPS(0.102)S(0.898)PPTK;KLLLDPS(0.078)S(0.782)PPT(0.14)K	92.295	0.012701	35201000.0	14028.0	10446.6	19924.9	15586.2	10366.7	8569.5	8901.7	12713.0	12119.8	20328.4	True	False	13411.34591665292	12172.723088161016	15742.935779869176	14219.782045136622	11730.102756782713	10225.434592778098	10898.13282361287	12265.876584203008	11556.353143370668	16646.729773776497	0.805644477858933	0.7312381022329467	0.9457074148382548	0.8542087387960708	0.7046490761963999	0.61426086274832	0.6546710958677686	0.7368340058913779	0.6942116139576753	1.0	14.022951169305982	-7.76513148682173	24.912685022070754	0.7109822803883312	0.83481013114819	0.1465954047424357	0.11013592578041789	136.58935846950777	921643.6961491713	0.03269786987820739	0.038519730065562446	1.7173883526356383e-08	7.76513148682173	0.1238278507598588	
KLNLAPAATTSNEPSGNNPPTHLSLDPT(ph)NAENTASQSPR	ddPTM_K562_Methotrexat_30min_R1	1	KLNLAPAATTSNEPSGNNPPTHLSLDPTNAENTASQSPR	39	1	Q9UER7-2;Q9UER7;Q9UER7-3;Q9UER7-5;Q9UER7-4	Q9UER7-2	DAXX	Death domain-associated protein 6	1	KLNLAPAATTSNEPS(0.005)GNNPPT(0.018)HLS(0.018)LDPT(0.29)NAENT(0.247)AS(0.21)QS(0.21)PR	63.227	0.00041396	16920000.0	4367.4	2855.0	4334.3	4010.8	3097.9	2744.5	3006.6	4087.3	4016.4	5169.9	True	False	4175.414325377101	3326.740223297503	3424.5896617140847	3659.1793911687205	3505.3281497715952	3274.835782703717	3680.9065849752797	3943.547342296306	3829.6784406536362	4233.581012644729	0.9862606415009191	0.7857981726017048	0.8089108609202532	0.8643225156763499	0.8279818289296909	0.7735379984279358	0.869454623398315	0.9314921175519828	0.9045955254464888	1.0	12.047662781005657	-9.696483093068695	1.1354030468423055	0.9886659235846758	0.8378076981677248	0.3990157223814308	0.0585520064536482	0.44330986067470823	1.1375505054809085	0.05401069119809781	0.018100497624459956	2.0114855030992834e-10	9.696483093068695	-0.15085822541695093	
KLPPPPGS(ph)PLGHSPTASPPPTAR	ddPTM_K562_Methotrexat_30min_R1	1	KLPPPPGSPLGHSPTASPPPTAR	23	1	B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2	B9EGQ5	WIZ	Protein Wiz	1	KLPPPPGS(0.757)PLGHS(0.178)PT(0.057)AS(0.008)PPPT(0.001)AR	78.221	0.002601	29530000.0	2652.5	1836.4	3451.7	2465.1	1829.3	2249.0	1801.3	2153.2	2156.3	3239.4	True	False	2535.8992760138217	2139.8338865371384	2727.23534027144	2248.988510314655	2069.885013840723	2683.5874204046836	2205.2873782731226	2077.4707355546225	2056.054083652384	2652.713269572202	0.9559643347442451	0.8066585676944366	1.028092772616641	0.8478068610398081	0.7802897650429175	1.0116387063715562	0.8313327352672251	0.7831493736560726	0.7750758844675135	1.0	11.373253028482806														
KLPPPPGSPLGHS(ph)PTASPPPTAR	ddPTM_K562_Methotrexat_30min_R1	1	KLPPPPGSPLGHSPTASPPPTAR	23	1	B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;O95785-2	B9EGQ5	WIZ	Protein Wiz	1	KLPPPPGS(0.003)PLGHS(0.765)PT(0.22)AS(0.011)PPPT(0.001)AR	94.006	0.00016079	22873000.0	2091.9	1530.0	1993.3	2138.2	1676.1	1228.6	1162.6	1837.2	1689.4	1959.2	True	False	1999.9425807703358	1782.8064944466482	1574.933570056222	1950.747325769661	1896.5365285619828	1466.0095618982632	1423.3426447456472	1772.584634665128	1610.8601627428175	1604.3698949638383	1.2465595291012448	1.1112191147708066	0.981652407590034	1.215896241816249	1.1821067788140776	0.9137603282759842	0.887166138690061	1.1048478534964539	1.0040453687141302	1.0	10.64779108487637	-8.2554694170954	24.990226629950318	0.9825920653855396	1.140059446238705	0.47852444143451556	0.08622047531072828	494.299224166885	2069135.794288478	0.030592963335207755	0.02981933376211713	5.553037200864559e-09	8.2554694170954	0.15746738085316547	
KLQGTEPRPS(ph)S(ph)S(ph)NMK	ddPTM_K562_Methotrexat_30min_R1	1	KLQGTEPRPSSSNMK	15	2	Q9NSK0-3;Q9NSK0-5;Q9NSK0	Q9NSK0-3	KLC4	Kinesin light chain 4	3	KLQGTEPRPS(1)S(1)S(1)NMK	47.113	0.033416	20013000.0	1838.0	1691.6	2607.0	2256.9	1636.9	1799.2	1655.7	1913.1	1836.3	2384.1	True	False	1757.2037207590597	1971.108147716307	2059.826326762941	2059.041081063301	1852.1810414671631	2146.869936323748	2027.032871929613	1845.8151886445983	1750.9308138064614	1952.3163875986563	0.9000609388524445	1.0096253661737504	1.0550678874834019	1.0546656751654457	0.9487094680106336	1.0996526741059587	1.0382706844062595	0.9454488014183735	0.8968478802557721	1.0	10.930971156124327	-9.275865835942806	19.335673537591422	0.9408608636199243	1.018687642264653	0.21650528749296394	0.05836417479605282	58.11952642465221	77889.4298506364	0.031603416001938306	0.015402685305145995	5.29827095001733e-10	9.275865835942806	0.07782677864472864	
KLQLERPVS(ph)PETQADLQR	ddPTM_K562_Methotrexat_30min_R1	1	KLQLERPVSPETQADLQR	18	2	Q9P206;Q9P206-3;Q9P206-2	Q9P206	KIAA1522	Uncharacterized protein KIAA1522	1	KLQLERPVS(0.99)PET(0.01)QADLQR	64.53699999999999	0.022747999999999997	40866000.0	2567.7	1889.0	3534.8	2538.8	2217.2	2147.2	1973.1	2546.1	2562.1	3209.6	True	False	2454.826982477169	2201.12514249001	2792.893785900133	2316.2273457412857	2508.800662924424	2562.1160111573763	2415.61790155482	2456.5522198567814	2442.9885302257467	2628.3103383401062	0.9339943410288073	0.8374677489113092	1.0626194879498014	0.8812609804685718	0.9545298461630076	0.9748148739450097	0.9190763610816176	0.934650746535587	0.9294901346271771	1.0	11.359919916924573														
KLQPMIT(ph)S(ph)ET(ph)GK	ddPTM_K562_Methotrexat_30min_R1	1	KLQPMITSETGK	12	1	P11831	P11831	SRF	Serum response factor	3	KLQPMIT(1)S(1)ET(1)GK	56.122	0.032375	0.0	596.89	497.2	736.07	604.27	726.9	664.38	468.55	876.55	509.59	512.85	True	False	570.6514302959055	579.3538490450151	581.5789659917134	551.2945872896989	822.5000910516709	792.7620321780632	573.6342647476114	845.7212396667305	485.89927212744925	419.9678953818932	1.358797747568275	1.3795193761613278	1.3848176786534145	1.3127065029301472	1.9584832557349163	1.887672940945102	1.3659002772723456	2.013775931366571	1.1569914688016856	1.0	8.714135234466944														
KLS(ph)GDQITLPTTVDYSSVPK	ddPTM_K562_Methotrexat_30min_R1	2	KLSGDQITLPTTVDYSSVPK	20	1	E9PJ38;E9PND3;E9PN10;O00559;O00559-2	E9PJ38	EBAG9	Receptor-binding cancer antigen expressed on SiSo cells	1	KLS(1)GDQITLPTTVDYSSVPK;KLS(1)GDQITLPTTVDYSSVPK	109.23	0.00012434	275650000.0	9065.6	6102.0	14966.7	9996.6	5885.0	4857.5	5152.5	7891.1	7188.9	11798.6	True	False	8667.08707884294	7110.251783734275	11825.394202057118	9120.213598722756	6658.980651862819	5796.143127886062	6308.0792852674585	7613.565540281941	6854.689608110477	9661.759209228436	0.8970506189560764	0.7359168894359231	1.2239379957598286	0.9439495852899726	0.6892099572821572	0.5999055660950308	0.6528913781293879	0.7880102759143324	0.7094659947189758	1.0	13.23807018297329	-7.7552522953773675	23.519805893231908	0.7179628230080672	0.9544587188578135	0.31220354024581365	0.15076740284548856	79.78260064016284	303283.9286602899	0.045131138883060154	0.05668545561001894	1.7569026772008918e-08	7.7552522953773675	0.23649589584974628	
KLS(ph)NPDIFSSTGK	ddPTM_K562_Methotrexat_30min_R1	1	KLSNPDIFSSTGK	13	1	Q6P0Q8-2;Q6P0Q8	Q6P0Q8-2	MAST2	Microtubule-associated serine/threonine-protein kinase 2	1	KLS(1)NPDIFSSTGK	92.236	0.0095238	11443000.0	3581.7	2548.3	5333.2	3816.9	2322.8	2334.3	2206.8	2811.6	3018.7	4620.1	True	False	3424.252756606485	2969.3632613061386	4213.83420249026	3482.2783031195527	2628.28891387374	2785.370438172813	2701.7310755416256	2712.7144343699506	2878.3612958871468	3783.355120315657	0.9050836222640366	0.7848492057648544	1.1137823620793723	0.9204206828009884	0.6946979150226992	0.7362170215574214	0.7141098283462779	0.7170129020676284	0.7607959613495114	1.0	11.885450484330612	-7.722353296920023	9.48465303644747	0.7518403820391473	0.9340327239133296	0.32629946859591785	0.11108074286222223	0.37034791815243423	85.3154573160171	0.0319555914564084	0.04106371441623927	1.895163585538226e-08	7.722353296920023	0.18219234187418232	
KLS(ph)PIIEDSR	ddPTM_K562_Methotrexat_30min_R1	1	KLSPIIEDSR	10	1	O60566;O60566-3	O60566	BUB1B	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta	1	KLS(0.835)PIIEDS(0.165)R	99.161	0.006099899999999999	49347000.0	2783.3	2078.1	3925.9	2772.3	2082.0	2065.9	1751.3	2660.3	2673.2	2934.1	True	False	2660.9494646293183	2421.470703339592	3101.9072405978636	2529.2567632734226	2355.819493148409	2465.105936778139	2144.073605490324	2566.735741127605	2548.9235154753774	2402.706057989688	1.107480232873637	1.0078097964948756	1.291005710117195	1.052670073754098	0.9804859338971709	1.0259706669406994	0.8923578472533764	1.0682687266686124	1.0608553247699504	1.0	11.23044444764532	-7.514290640619059	24.71686913898484	1.0047076547342886	1.130864400373988	0.35446162548784843	0.07887364156055492	396.82534131251947	1142079.558743091	0.022913240808124954	0.03114107846768227	3.0599149774714994e-08	7.514290640619059	0.12615674563969947	
KLS(ph)PTEPK	ddPTM_K562_Methotrexat_30min_R1	1	KLSPTEPK	8	1	O14828-2;O14828	O14828-2	SCAMP3	Secretory carrier-associated membrane protein 3	1	KLS(0.875)PT(0.125)EPK	77.288	0.024794999999999998	0.0	3275.4	2158.8	4974.9	3201.9	2135.5	1783.7	1876.3	2113.5	2318.6	3901.7	True	False	3131.4173378532223	2515.5050066741337	3930.736476031051	2921.194398270452	2416.355680892618	2128.374780691791	2297.1080374473217	2039.167007056795	2210.808792077364	3195.0643217539846	0.980079592305102	0.7873096605745967	1.2302526898341775	0.9142834397358276	0.7562776324847565	0.6661445800012513	0.7189551777744134	0.6382240861859582	0.691945003117716	1.0	11.641629259884878	-7.718286954917824	3.720392308490057	0.7192894827541838	0.9902346783504824	0.4085323382098114	0.1376413339949857	0.20394838116968345	5.855633703771871	0.04133016644076873	0.05246553144340376	1.9129915209333604e-08	7.718286954917824	0.2709451955962986	
KLSSWDQAET(ph)PGHT(ph)PSLR	ddPTM_K562_Methotrexat_30min_R1	2	KLSSWDQAETPGHTPSLR	18	1	O75533	O75533	SF3B1	Splicing factor 3B subunit 1	2	KLS(0.006)S(0.006)WDQAET(0.988)PGHT(0.742)PS(0.258)LR;KLSSWDQAET(1)PGHT(0.813)PS(0.188)LR	74.251	0.00656	44223000.0	10153.4	7468.1	9514.0	10995.0	7847.5	7528.200000000001	7130.9	10525.5	11193.099999999999	12635.0	True	False	9707.068693337884	8702.076589004582	7517.141416502734	10031.085420838763	8879.5838004237	8982.918105064715	8730.185846737257	10155.31219908981	10672.735224101241	10346.679064346727	0.9381820614101336	0.8410502089497272	0.7265269725438569	0.9694980735803957	0.8582061688780469	0.8681933641895446	0.843766950965002	0.9815045132774689	1.0315131220101394	1.0	13.336880165031893	-9.356716525234484	4.10781245150279	1.0128593736628106	0.8614902996072905	0.5299854575599316	0.06107921415096178	0.18623473588118494	5.562791565624071	0.03671841699202099	0.016474437758276443	4.398286087910122e-10	9.356716525234484	-0.15136907405552014	
KLSSWDQAETPGHT(ph)PSLR	ddPTM_K562_Methotrexat_30min_R1	2	KLSSWDQAETPGHTPSLR	18	1	O75533	O75533	SF3B1	Splicing factor 3B subunit 1	1	KLSSWDQAETPGHT(0.715)PS(0.285)LR;KLSSWDQAETPGHT(0.5)PS(0.5)LR	148.2	3.7229e-12	41301000.0	5288.4	3801.1000000000004	5886.4	5093.799999999999	3909.3999999999996	3855.9	3956.0	5109.200000000001	5554.700000000001	6972.700000000001	True	False	5055.928268151361	4429.1671673471565	4650.9250824155615	4647.234462634692	4423.554623686066	4600.998103307435	4843.233702575069	4929.506540077871	5296.4632094160825	5709.876463155552	0.8854706928908253	0.7757028012650532	0.81454040423236	0.8138940470292428	0.774719847658735	0.8057964358767759	0.8482204008838513	0.8633298061502348	0.9275968129245659	1.0	12.479243816954083	-9.811401801784779	1.0996995605070274	0.9995115576304462	0.8092579230787847	0.8076872844822293	0.029630751810700177	0.18512920858139215	0.4792256364319646	0.027134422802598562	0.009005365069382728	1.543825457845946e-10	9.811401801784779	-0.19025363455166144	
KLSVPTS(ph)DEEDEVPAPKPR	ddPTM_K562_Methotrexat_30min_R1	2	KLSVPTSDEEDEVPAPKPR	19	2	Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6	Q5STZ8	ABCF1	ATP-binding cassette sub-family F member 1	1	KLS(0.001)VPT(0.163)S(0.836)DEEDEVPAPKPR;KLSVPT(0.154)S(0.846)DEEDEVPAPKPR	98.552	0.00045722	258050000.0	10205.4	7201.0	18463.4	11852.7	8202.7	6811.799999999999	6704.2	10700.0	8594.4	15369.2	True	False	9756.782835600929	8390.842853928309	14588.184657289938	10813.592193503917	9281.498826344126	8128.083944114109	8207.787509808844	10323.674935182267	8194.848219886873	12585.688949407026	0.7752283466421295	0.6666971420999279	1.1591089463542843	0.8591974771483128	0.7374645014392656	0.645819547645587	0.6521524203246382	0.8202709423919671	0.6511243248446064	1.0	13.619496572344556														
KLTS(ph)DEEGEPSGK	ddPTM_K562_Methotrexat_30min_R1	2	KLTSDEEGEPSGK	13	1	Q8WVC0-2;Q8WVC0	Q8WVC0-2	LEO1	RNA polymerase-associated protein LEO1	1	KLT(0.082)S(0.918)DEEGEPSGK;KLT(0.085)S(0.844)DEEGEPS(0.071)GK	100.18	0.0047396999999999995	49817000.0	11549.2	7139.2	19014.1	12472.599999999999	7546.900000000001	6511.799999999999	6266.0	9657.3	10116.8	14937.0	True	False	11041.51099662161	8318.83145434869	15023.300253050715	11379.146522960751	8539.449631528207	7770.113189947189	7671.3100051403935	9317.647285190256	9646.472176178846	12231.764557510649	0.9026915899752019	0.6801006850022054	1.228220195247789	0.9302947640513268	0.6981371813835923	0.6352405782022775	0.6271629877334414	0.7617582272272366	0.7886410935089198	1.0	13.578344921986961	-7.754949175479689	24.0930963182316	0.7278490913915183	0.9380174164604851	0.23586584017660162	0.15828919535779215	130.6703403355347	485072.7468330925	0.047473414276557394	0.05975445536551186	1.7581293518999045e-08	7.754949175479689	0.21016832506896677	
KMPLDLS(ph)PLATPIIR	ddPTM_K562_Methotrexat_30min_R1	1	KMPLDLSPLATPIIR	15	1	B8ZZU6;E9PBF9;P15336-5;P15336;P15336-4;E9PEK8;H7C2N6;P15336-3;P15336-7;C9JCI8	B8ZZU6	ATF2	Cyclic AMP-dependent transcription factor ATF-2	1	KMPLDLS(1)PLATPIIR	73.688	0.014415	61672000.0	4518.4	3936.4	6526.6	5046.5	3534.1	3047.7	3436.7	4711.2	4369.4	5222.2	True	False	4319.776546179395	4586.823192640381	5156.755851266211	4604.081180196709	3998.896095454272	3636.6248915817523	4207.467458452917	4545.504425666421	4166.267547702419	4276.408975847367	1.0101411185358937	1.072587588920095	1.2058612448881607	1.0766232149918293	0.9351060943982548	0.850392212746948	0.9838786426219233	1.062925564729396	0.9742444118962863	1.0	12.062184116956272	-7.678076915500472	5.775924380174803	0.9660973163226171	1.10066776245089	0.44606307231120323	0.06745733607341309	0.20384004014256765	10.9086908713445	0.02199700884922904	0.028375298023367888	2.0985681848725247e-08	7.678076915500472	0.13457044612827296	
KMSGGS(ph)T(ph)MSSGGGNTNNSNSK	ddPTM_K562_Methotrexat_30min_R1	1	KMSGGSTMSSGGGNTNNSNSK	21	1	A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70	A0A6E1WJ75	LDB1	LIM domain-binding protein 1	2	KMS(0.453)GGS(0.571)T(0.64)MS(0.237)S(0.057)GGGNT(0.037)NNS(0.003)NS(0.002)K	40.315	0.031361	1460200.0	392.91	229.2	427.73	487.07	317.25	162.94	257.15	227.37	406.6	525.04	True	False	375.6381468571502	267.0714042661251	337.95531827629947	444.3693293249599	358.9739357355105	194.42584894652703	314.82243342193607	219.37326822545722	387.6972547479755	429.95016825837797	0.8736783343492286	0.6211682747979038	0.7860336923352608	1.0335368192202143	0.8349198633637599	0.45220554217736014	0.7322300505130723	0.5102295205839417	0.9017260216886096	1.0	8.748025649188202	-6.009465534536524	14.648657604951223	0.7488254393642728	0.964318700649823	0.0258357305972281	0.18379544619855226	1241478.4216107305	41142815.541054145	0.046489119661152246	3878994.8014920163	9.784406004193392e-07	6.009465534536524	0.21549326128555013	
KMSGGS(ph)TMSSGGGNTNNSNSK	ddPTM_K562_Methotrexat_30min_R1	2	KMSGGSTMSSGGGNTNNSNSK	21	1	A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70	A0A6E1WJ75	LDB1	LIM domain-binding protein 1	1	KMS(0.368)GGS(0.498)T(0.13)MS(0.003)S(0.001)GGGNTNNSNSK;KMS(0.161)GGS(0.398)T(0.398)MS(0.038)S(0.005)GGGNTNNSNSK	68.42	0.0039046	23071700.0	5208.1	3191.8	9770.8	6788.2	3847.2	3315.6	2786.7	3677.3	4502.4	7257.7	True	False	4979.15816000286	3719.190698676344	7720.042605882372	6193.08904536041	4353.174233448876	3956.2927750528097	3411.6884122765287	3547.9672746865167	4293.084406732131	5943.260201449089	0.8377822930903881	0.6257829158766309	1.298957532433136	1.0420356564315334	0.7324556027998711	0.6656771941582137	0.5740432517904379	0.5969732359726483	0.7223450196047935	1.0	12.537038829521567	-7.875387258931485	5.606325408594898	0.6805749851520737	0.9515925916091684	0.2572645929835552	0.1925755979750306	0.27500805657071625	12.462189980780376	0.062392587405487615	0.07126824406701192	1.3323328655783785e-08	7.875387258931485	0.2710176064570947	
KMSGGST(ph)MS(ph)SGGGNTNNSNSK	ddPTM_K562_Methotrexat_30min_R1	1	KMSGGSTMSSGGGNTNNSNSK	21	1	A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70	A0A6E1WJ75	LDB1	LIM domain-binding protein 1	2	KMS(0.371)GGS(0.31)T(0.417)MS(0.853)S(0.048)GGGNT(0.001)NNSNSK	64.27	0.0044441	2047000.0	804.86	328.28	1019.9	675.56	370.63	537.55	373.33	521.84	633.5	808.83	True	False	769.4793181121522	382.522690194082	805.8369277581601	616.3347036745638	419.3743413763663	641.4239296747614	457.0587558600482	503.48659141827244	604.0487232731001	662.3430492770526	1.1617534432527659	0.5775295605677533	1.2166458584229591	0.9305369843426199	0.6331678755202661	0.9684164880644186	0.6900634895450746	0.760159847631568	0.9119877138175139	1.0	9.371434819650323	-7.543910964530478	24.81587010309038	0.8124422852484912	0.966041645208839	0.1182538058334498	0.19269449837697136	448.6501803455051	529358.1608578404	0.053880820145859605	0.06956670839682107	2.8581764430544708e-08	7.543910964530478	0.1535993599603478	
KNGSTAVAESVAS(ph)PQK	ddPTM_K562_Methotrexat_30min_R1	2	KNGSTAVAESVASPQK	16	1	A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	KNGSTAVAES(0.001)VAS(0.999)PQK;KNGSTAVAESVAS(1)PQK	145.19	1.6307e-09	27707000.0	16011.3	10483.2	25062.0	16286.2	10920.400000000001	9331.4	8830.3	13677.7	13628.300000000001	21231.3	True	False	15307.462423389286	12215.370616067386	19801.828692494375	14858.414131956733	12356.624011997075	11134.560984777354	10810.719556079037	13196.647538405834	12994.723307628712	17386.105834496604	0.8804422663191788	0.7025938259176063	1.1389455971908684	0.8546142691985369	0.7107183247141926	0.6404286900569038	0.6218022401904958	0.7590341197752135	0.7474200048779905	1.0	14.085647211424106	-7.673981932170941	4.940157945753073	0.7231526342018642	0.9027701943823627	0.2072996024005065	0.1388308670687597	0.2882703732244144	12.052242241741794	0.04115543781266307	0.053143380007005116	2.118449266653892e-08	7.673981932170941	0.17961756018049857	
KNLGDNTINMPPLS(ph)T(ph)IDPSGTR	ddPTM_K562_Methotrexat_30min_R1	1	KNLGDNTINMPPLSTIDPSGTR	22	1	Q5T3J3	Q5T3J3	LRIF1	Ligand-dependent nuclear receptor-interacting factor 1	2	KNLGDNTINMPPLS(0.53)T(0.559)IDPS(0.484)GT(0.426)R	47.79600000000001	0.02181	14812000.0	2025.7	1746.5	1750.1	1571.2	1939.5	2150.6	2154.3	1760.5	1722.0	1711.6	True	False	1936.6526535046928	2035.0794395758614	1382.7779265315767	1433.4553354453715	2194.5782454185123	2566.1730130379356	2637.456614119686	1698.5822171391019	1641.944595858371	1401.6126542568943	1.3817317128400681	1.4519556693463345	0.9865621021127956	1.0227186028121011	1.5657523059265128	1.8308717499404048	1.8817300244182016	1.2118770560327559	1.171468159103412	1.0	10.452871989935883	-7.777010428220656	24.94564656848952	1.4954788673574242	1.211958685055124	0.11579517233656511	0.2950535464273915	450.06867944975187	721030.7282587594	0.09834668096120919	0.11190000801496194	1.671050488789503e-08	7.777010428220656	-0.28352018230230014	
KNLVLK	ddPTM_K562_Methotrexat_30min_R1	1	KNLVLK	6	1	A0A5H1ZRR2	A0A5H1ZRR2			0		46.766000000000005	0.032999	0.0	703.25	510.64	901.89	669.18	609.8	440.36	595.99	435.72	514.81	632.98	False	True	672.3359720477737	595.0145806040755	712.5956140560911	610.5140283689755	689.9993885311721	525.4533376831514	729.65592881641	420.3954806315528	490.87659546681084	518.3411882983927	1.297091543612257	1.1479207017242556	1.374761701641723	1.1778227201530467	1.331168358039032	1.0137209805921588	1.4076749933990775	0.8110400834855986	0.947014450227769	1.0	9.017758227126272	-9.268561484090533	24.99935510377947	0.9092704372818468	1.2421491344179336	0.6197531093763906	0.11850317147741672	346.82129233549745	1217371.509429981	0.058151454320250484	0.028868557120562025	5.388135588714722e-10	9.268561484090533	0.33287869713608687	
KPATPAEDDEDDDIDLFGS(ph)DNEEEDKEAAQLR	ddPTM_K562_Methotrexat_30min_R1	3	KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR	32	2	E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;P29692-2;E9PQZ1;P29692-4;H0YE72;P29692-3;E9PL71	E9PQ49;P29692-3	EEF1D	Elongation factor 1-delta	1	KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR	112.75	1.8238000000000003e-18	292460000.0	12051.4	7283.240000000001	20056.1	10503.1	8852.8	6661.009999999999	6212.3	11807.4	10886.699999999999	16066.4	True	False	11521.634885938909	8486.671616087318	15846.59869282324	9582.309530114737	10017.098371250831	7948.1559107113435	7605.566413171666	11392.127049501967	10380.579693223772	13156.619273400884	0.8757291403295777	0.6450495708456858	1.2044582550823497	0.7283261247429701	0.7613732801026392	0.6041184095659254	0.5780790836250813	0.8658855905736939	0.789000538627008	1.0	13.683501201138661	-3.5296068600219113	14.570765742111625	0.7928708415283988	0.9589146128243233	0.0	0.1825624667148163	0.0	0.0	0.04193789503138034	0.0	0.00029538819837094326	3.5296068600219113	0.1660437712959245	
KPATPAEDDEDDDIDLFGS(ph)DNEEEDKEAAQLREER	ddPTM_K562_Methotrexat_30min_R1	3	KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREER	35	3	E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;P29692-2;E9PQZ1;P29692-4;H0YE72;P29692-3;E9PL71	E9PQ49;P29692-3	EEF1D	Elongation factor 1-delta	1	KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER	67.658	2.0294000000000003e-05	676510000.0	6202.0	4078.1000000000004	10095.8	6459.9	3798.0000000000005	3355.85	3022.37	5032.4	5108.5	8123.1	True	False	5929.367506065113	4751.936709152205	7976.829547270159	5893.570596641773	4297.503571074765	4004.32051790354	3700.2134089109736	4855.407639608529	4871.006950024676	6651.927875551631	0.891375796159456	0.7143698485693724	1.1991755918743567	0.8859943623716803	0.6460538435586063	0.6019789439721593	0.5562618053197281	0.7299248774861198	0.7322699585976394	1.0	12.699556810751476	-7.690199053723458	5.601340372610609	0.6846144362501545	0.9319558516628864	0.2945272114585761	0.15804303081325718	0.23193971434908414	13.035909208380868	0.046875524692651944	0.06032161907614083	2.040802352730186e-08	7.690199053723458	0.2473414154127319	
KPCDT(ph)MK	ddPTM_K562_Methotrexat_30min_R1	1	KPCDTMK	7	1	H0YDL4;A0A087WYJ6;H0Y972;G3V164;F8W7L6;P42261-3;P42262-4;P42261-4;P42262;P42262-2;P42263-2;P42263;P42262-3;P48058;P42261-2;P42261;P42261-6;P42261-5	H0YDL4	GRIA4;GRIA3;GRIA2;GRIA1	Glutamate receptor 1;Glutamate receptor 2;Glutamate receptor 3;Glutamate receptor 4	1	KPCDT(1)MK	64.654	0.031605	53280000.0	187.01	155.82	234.42	120.77	196.04	155.9	176.84	169.8	204.28	264.7	True	False	178.78926431945132	181.56660651286052	185.2184455388449	110.18228160752136	221.822696175223	186.02546858207666	216.50087157820414	163.82803775644388	194.7830673878909	216.76026500455697	0.824824901905765	0.8376378692332906	0.854485232959791	0.5083140196622522	1.0233549777703013	0.8582083463413639	0.9988033165287588	0.7558029039731968	0.898610579682563	1.0	7.759956505807791														
KPEEMPTACPGHS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	KPEEMPTACPGHSPR	15	1	C9J8F8;C9J6I8;Q9NZC9	C9J8F8	SMARCAL1	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1	1	KPEEMPTACPGHS(1)PR	63.446999999999996	0.022162	10748000.0	2390.3	1692.4	2932.0	2514.7	2010.0	1930.7	2152.1	2524.2	2446.1	3135.5	True	False	2285.2252740644053	1972.040334118632	2316.6132681507243	2294.2401553236214	2274.3502311375146	2303.780450233581	2634.763208117242	2435.4224552698183	2332.381344906599	2567.6305663837875	0.8900132690361614	0.7680389694441222	0.9022377667880032	0.8935242419063405	0.8857778299238256	0.8972398445459353	1.0261457557844869	0.9485096832679597	0.908378867054652	1.0	11.326221925445084	-7.925233816903922	0.7470281524302018	0.9678261412832276	0.8356433891308087	0.4947888644574877	0.04750536505654306	0.6028789717463019	0.7457390181646714	0.02989783985761654	0.04292802254956116	1.1878625298816996e-08	7.925233816903922	-0.13218275215241893	
KPIETGS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	KPIETGSPK	9	1	Q5T757;Q05519-2;Q05519	Q5T757	SRSF11	Serine/arginine-rich splicing factor 11	1	KPIET(0.246)GS(0.754)PK	84.365	0.015733	144230000.0	7297.7	5339.9	12284.0	7502.8	5665.5	3707.5	3853.7	5215.0	5796.7	7788.4	True	False	6976.901846019248	6222.227712219383	9705.756270792468	6845.041172848478	6410.612554482379	4423.92190357953	4717.990323461461	5031.58549410986	5527.212682237065	6377.845288860942	1.09392773421528	0.9756002898167899	1.5217923657922217	1.073252934624097	1.0051376701906938	0.69363894908301	0.7397467498469339	0.788916203862399	0.8666269612858865	1.0	12.638853386375775	-7.923299388868794	2.645954260099189	0.8017402130488619	1.1824610797425008	0.5298150436732172	0.15412029079586556	0.2104160079742432	2.990523278119014	0.052749260595965	0.06025287390933683	1.1931652905027396e-08	7.923299388868794	0.3807208666936389	
KPLFHGDSEIDQLFR	ddPTM_K562_Methotrexat_30min_R1	2	KPLFHGDSEIDQLFR	15	1	A0A087WZZ9;A0A024QZP7;P06493-2;P06493	A0A087WZZ9	CDK1;CDC2	Cyclin-dependent kinase 1	0	;	161.87	9.823100000000002e-07	19416800.0	15111.7	10880.0	17357.7	16202.3	11932.900000000001	11021.5	10658.5	15732.7	16192.4	20221.0	False	True	14447.407762238676	12677.735071620611	13714.555977005413	14781.869514693579	13502.2855090253	13151.248890169063	13048.939944109305	15179.372023620755	15439.618858290987	16558.780954503778	0.8724922324858199	0.765620072302027	0.8282346396565641	0.8926906850998049	0.8154154310105086	0.7942160069816063	0.7880374757031954	0.916696226934034	0.9324127724566347	1.0	14.015308846128962	-9.60795578255649	1.9979292377174744	0.9824374619749106	0.8221209737097763	0.695047277207244	0.03931671473165038	0.18939535768243057	1.3772346561647155	0.0359534369106034	0.011140754300026456	2.4662904283967725e-10	9.60795578255649	-0.16031648826513423	
KPLPDHVSIVEPKDEILPT(ph)TPISEQK	ddPTM_K562_Methotrexat_30min_R1	1	KPLPDHVSIVEPKDEILPTTPISEQK	26	2	E9PPU1;H0YEU2;E9PL09;P23396;P23396-2;E9PSF4	E9PPU1	RPS3	40S ribosomal protein S3	1	KPLPDHVSIVEPKDEILPT(0.471)T(0.471)PIS(0.057)EQK	75.868	0.00062725	14045000.0	2684.6	1170.4	4170.0	2373.1	1194.1	1296.3	1105.8	1921.7	1863.0	3183.4	True	False	2566.588198449276	1363.7887066015408	3294.7739864217356	2165.0540074754404	1351.1450801001513	1546.7916287552655	1353.8037988643862	1854.1127217700714	1776.389536634232	2606.8554122232977	0.9845533382537396	0.5231547174449588	1.263888273577757	0.8305232416511125	0.5183045725377634	0.5933553589134658	0.5193244675237946	0.7112449401974167	0.6814300203628134	1.0	11.348094851481415	-7.571645018795344	8.132832142243515	0.6466394473010533	0.9106419502576563	0.22478976234322767	0.21123569370238837	0.34486577034988075	51.015705637305345	0.06048001682858975	0.07832396284794527	2.6813591037231204e-08	7.571645018795344	0.264002502956603	
KPLPDHVSIVEPKDEILPTT(ph)PISEQK	ddPTM_K562_Methotrexat_30min_R1	1	KPLPDHVSIVEPKDEILPTTPISEQK	26	2	E9PPU1;H0YEU2;E9PL09;P23396;P23396-2;E9PSF4	E9PPU1	RPS3	40S ribosomal protein S3	1	KPLPDHVSIVEPKDEILPT(0.175)T(0.742)PIS(0.083)EQK	72.676	0.00051947	14729000.0	2688.2	1340.1	4772.4	2443.2	1517.9	1241.7	1051.9	1941.7	2019.0	3619.6	True	False	2570.0299467597933	1561.528747194739	3770.738458704817	2229.008449312712	1717.530455643597	1481.640951496887	1287.8153518045287	1873.409310433963	1925.137130684118	2964.0553653588777	0.867065432311391	0.5268217204862078	1.2721552042427078	0.7520130950869844	0.5794528927214031	0.4998695263296794	0.4344774955472549	0.6320426171280835	0.6494943222664901	1.0	11.533356680545609	-7.5312713216089415	9.909816715949272	0.603579234491719	0.8789756253286485	0.20954858377473262	0.21880417108506914	0.24617655576414318	246.72024067633396	0.06302479755185325	0.08323843692179653	2.9425827070978432e-08	7.5312713216089415	0.27539639083692946	
KPLTSGMDAS(ph)ELT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	KPLTSGMDASELTPR	15	1	E9PPH6;Q8NEV8-2;Q8NEV8;F5GXG5	E9PPH6	EXPH5	Exophilin-5	2	KPLT(0.032)S(0.027)GMDAS(0.962)ELT(0.979)PR;KPLT(0.068)S(0.197)GMDAS(0.875)ELT(0.86)PR	72.209	0.01768	101513000.0	133.09	0.0	188.91	201.94	122.15	235.61	195.902	189.22	169.31300000000002	261.68899999999996	True	False	127.23952295746635	0.0	149.2603726078969	184.23623373207627	138.21486603654094	281.13829796422743	239.83801031391852	182.565025349083	161.441675585696	214.2945862817435	0.5937598572377296	0.0	0.6965195677489353	0.8597334955062838	0.6449760044559555	1.3119244066884697	1.1191977103826218	0.8519348459370591	0.7533632948311666	1.0	7.7434515934843	-6.976312458756569	4.327581923744427	0.9322628611564775	0.2955675402950621	0.5634351312642719	0.22179568695935023	0.14090149495960685	6.262843470958088	0.061289057915383645	0.12916551805988788	1.0560574417030398e-07	6.976312458756569	-0.6366953208614154	
KPNIFYSGPAS(ph)PARPR	ddPTM_K562_Methotrexat_30min_R1	1	KPNIFYSGPASPARPR	16	2	Q6PL18-2;Q6PL18	Q6PL18-2	ATAD2	ATPase family AAA domain-containing protein 2	1	KPNIFYSGPAS(1)PARPR	100.01	0.007617699999999999	191140000.0	3344.8	2377.3	3966.8	3858.4	2672.2	2418.6	2506.5	2941.9	2951.0	3238.9	True	False	3197.766596950436	2770.1084178091614	3134.2228895294325	3520.1400625524584	3023.6411381321695	2885.9602200937184	3068.6464296017225	2838.431709515205	2813.8086541103676	2652.3038244173026	1.2056562176292034	1.0444159497518124	1.1816982883618188	1.3272009149727841	1.1400055718716342	1.0880956372815807	1.1569739489690207	1.0701759290864024	1.0608922809695631	1.0	11.373030331935293	-9.44631250979648	0.7986512829878	1.0043606351952032	1.174926661784822	0.4142011662684728	0.06947056728009941	0.6714431973834399	0.8304899311243011	0.06942034494175565	0.029208283408585757	3.5783885061382997e-10	9.44631250979648	0.17056602658961872	
KPPLS(ph)PAQTNPVVQR	ddPTM_K562_Methotrexat_30min_R1	2	KPPLSPAQTNPVVQR	15	1	Q8IY33-2;Q8IY33;Q8IY33-4	Q8IY33-2	MICALL2	MICAL-like protein 2	1	KPPLS(0.996)PAQT(0.004)NPVVQR;KPPLS(0.917)PAQT(0.083)NPVVQR	105.99	0.0011075	134946000.0	6232.9	5022.0	8663.5	5823.5	4943.1	4686.1	4060.5	5501.299999999999	5578.5	6416.1	True	False	5958.9091790637285	5851.800140595463	6845.14974373254	5312.962796567032	5593.204292306389	5591.622503672027	4971.170487691121	5307.816160833477	5319.156752610876	5254.082116719826	1.1341484671701196	1.1137625965101583	1.302825039972164	1.0112066539005609	1.0645445137805116	1.0642434547945228	0.946153938453225	1.0102271039774302	1.0123855384147813	1.0	12.35922303337472	-7.295852504396796	24.812827466340995	1.017143830703001	1.1765971014314494	0.6518206753921381	0.05620317417298612	345.34764082964216	249004.43049684822	0.01605973869828628	0.023822062879119758	5.0599647994514426e-08	7.295852504396796	0.1594532707284484	
KPS(ph)PQPSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	KPSPQPSSPR	10	1	G3V5E1;O75909-1;O75909;O75909-4	G3V5E1	CCNK	Cyclin-K	2	KPS(1)PQPS(0.009)S(0.991)PR;KPS(1)PQPS(0.002)S(0.998)PR;KPS(0.999)PQPS(0.004)S(0.997)PR;KPS(1)PQPS(0.016)S(0.984)PR	128.35	0.0047604	57006400.0	20501.0	15271.5	29366.199999999997	23102.4	15486.800000000001	15074.4	14392.999999999998	19292.5	17850.9	24591.8	True	False	19599.800587204292	17794.855803883635	23202.6359328676	21077.04846078993	17523.585651532554	17987.314455379455	17620.996633256575	18613.971839906902	17021.01555528932	20137.986720585825	0.9732750775512541	0.8836462180051519	1.1521825023923058	1.046631361577181	0.8701756483739892	0.8932032136555206	0.8750128241590166	0.9243213881395097	0.8452193256185725	1.0	14.297631837799218	-7.763340492225998	24.999969639811262	0.8958167231574538	1.014502450315363	0.3584927799732839	0.07357648631220245	56.21337424095399	739219.6461909855	0.022991902832898217	0.027406106156253607	1.724485344090285e-08	7.763340492225998	0.11868572715790926	
KPSPQPSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	KPSPQPSSPR	10	1	G3V5E1;O75909-1;O75909;O75909-4	G3V5E1	CCNK	Cyclin-K	1	KPSPQPS(0.005)S(0.995)PR;KPSPQPS(0.105)S(0.895)PR	91.307	0.0092972	22219600.0	7234.2	6201.200000000001	9483.2	9059.0	5719.4	5843.5	5458.8	7363.5	6405.5	7979.5	True	False	6916.193229986501	7225.842897622583	7492.805915595823	8264.811535004848	6471.601349237757	6972.673673248014	6683.07485733488	7104.521531328468	6107.709703118935	6534.335227064084	1.0584386918719486	1.1058267821483039	1.1466822033497637	1.264828210951503	0.9903993481132565	1.0670823321656973	1.0227627792425986	1.0872600324976855	0.934710187169746	1.0	12.673824755051319	-7.7964217136763025	24.999948979026342	1.0241874222574274	1.1414171767926098	0.49584647474124166	0.062420489979772814	165.55658473627244	118313.23030013165	0.01960335585908261	0.022229024644781274	1.5980055610530902e-08	7.7964217136763025	0.11722975453518236	
KPSVGVPPPAS(ph)PSYPR	ddPTM_K562_Methotrexat_30min_R1	1	KPSVGVPPPASPSYPR	16	1	Q9P206;Q9P206-3;Q9P206-2	Q9P206	KIAA1522	Uncharacterized protein KIAA1522	1	KPSVGVPPPAS(0.572)PS(0.427)Y(0.001)PR	72.316	0.025047	58482000.0	3821.1	2690.8	4999.9	4581.8	3312.0	2970.2	3065.8	3886.7	3919.4	4789.6	True	False	3653.1290192559522	3135.408964220286	3950.4893176762675	4180.120707703414	3747.586052501214	3544.1491134219614	3753.383691950113	3750.002557997467	3737.187949481591	3922.1570278270738	0.931408149479378	0.7994093408231908	1.0072236500599494	1.0657708699692872	0.9554910795036234	0.9036224425174191	0.9569692557744269	0.9561071959617633	0.9528399610129945	1.0	11.937431581215195	-6.771908490721182	24.999999950095173	0.9725726545040965	0.8654087320900539	0.43006955728172014	0.05029969437470098	180.72962072336716	431580.8010031169	0.0138485914437849	0.029329812680682254	1.690797158432786e-07	6.771908490721182	-0.1071639224140426	
KPVTVSPT(ph)TPTSPTEGEAS	ddPTM_K562_Methotrexat_30min_R1	1	KPVTVSPTTPTSPTEGEAS	19	1	Q9Y6G9;E9PHI6	Q9Y6G9	DYNC1LI1	Cytoplasmic dynein 1 light intermediate chain 1	1	KPVT(0.003)VS(0.085)PT(0.803)T(0.11)PTSPTEGEAS	101.42	0.0032023000000000004	20706000.0	1274.0	1008.8	1472.9	1438.1	908.25	793.46	870.1	914.57	1349.7	1138.1	True	False	1217.996485444527	1175.4870533318813	1163.7584183694423	1312.0240057942906	1027.7007947416155	946.7849153376178	1065.2420739662712	882.4040547167895	1286.952741597006	931.9790615855172	1.3068925425990003	1.2612805392130797	1.2486958842075415	1.4077827065795092	1.102708029720381	1.0158864660831675	1.1429892771990413	0.946806737498599	1.380881604150628	1.0	9.864153732544764	-7.811737204230014	11.49052213322331	1.0935213673610726	1.2987940312216537	0.4297323421693314	0.11716009606327878	0.6298401539407112	141.97975978659053	0.034382006980579555	0.03902637959244892	1.5426336330382587e-08	7.811737204230014	0.20527266386058107	
KPVTVSPTT(ph)PTS(ph)PTEGEAS	ddPTM_K562_Methotrexat_30min_R1	1	KPVTVSPTTPTSPTEGEAS	19	1	Q9Y6G9;E9PHI6	Q9Y6G9	DYNC1LI1	Cytoplasmic dynein 1 light intermediate chain 1	2	KPVT(0.001)VS(0.014)PT(0.116)T(0.865)PT(0.188)S(0.666)PT(0.112)EGEAS(0.038)	90.45299999999999	0.017037	33787000.0	931.79	704.73	1220.6	980.68	555.07	703.55	502.45	726.13	777.59	1046.9	True	False	890.8296272938436	821.1746541381605	964.41274048594	894.7053070039253	628.0714342276116	839.5010803137912	615.1372026943491	700.5915963255983	741.4400106234096	857.2962653315861	1.0391152549221563	0.9578656613190137	1.1249468584969553	1.0436360721318085	0.7326188852399647	0.9792426658817742	0.7175316487077259	0.8172106011153829	0.8648585566118552	1.0	9.743650048327137	-7.740272901904196	24.824356813957	0.842418610933212	1.0413932598818219	0.49800393550665045	0.09290465352107187	172.98664002518234	202880.36169445753	0.026177186901654964	0.03375900069565592	1.818557754435099e-08	7.740272901904196	0.19897464894860983	
KPVTVSPTTPT(ph)SPTEGEAS	ddPTM_K562_Methotrexat_30min_R1	2	KPVTVSPTTPTSPTEGEAS	19	1	Q9Y6G9;E9PHI6	Q9Y6G9	DYNC1LI1	Cytoplasmic dynein 1 light intermediate chain 1	1	KPVT(0.001)VS(0.031)PT(0.031)T(0.11)PT(0.76)S(0.029)PT(0.019)EGEAS(0.019);KPVTVS(0.001)PT(0.003)T(0.177)PT(0.471)S(0.324)PT(0.021)EGEAS(0.004)	87.719	0.018127	284820000.0	4410.6	2847.8	5440.1	4434.0	3016.0	2957.1	2883.0	4072.6	3495.3	3992.0	True	False	4216.715305103319	3318.350545676578	4298.2973533652	4045.2781042291094	3412.656864234198	3528.5177238233405	3529.586138656199	3929.364349628343	3332.804265913918	3269.010116729095	1.2899058597354476	1.015093385210093	1.3148620530015334	1.237462705767559	1.043941970925692	1.0793841553949988	1.0797109866970467	1.2020043405555394	1.0195148215841723	1.0	11.674638126537015	-7.759329276126965	24.99648124016961	1.0817384108817363	1.2072805428681628	0.3698907862387889	0.09094100827373894	69.64625180059699	825025.0888156283	0.02689025837147968	0.033007941033485866	1.740486759789738e-08	7.759329276126965	0.1255421319864265	
KPVTVSPTTPTS(ph)PTEGEAS	ddPTM_K562_Methotrexat_30min_R1	3	KPVTVSPTTPTSPTEGEAS	19	1	Q9Y6G9;E9PHI6	Q9Y6G9	DYNC1LI1	Cytoplasmic dynein 1 light intermediate chain 1	1	KPVTVSPT(0.001)T(0.007)PT(0.009)S(0.472)PT(0.255)EGEAS(0.255);KPVTVSPTTPT(0.002)S(0.527)PT(0.149)EGEAS(0.322);KPVTVS(0.001)PT(0.007)T(0.261)PT(0.207)S(0.433)PT(0.074)EGEAS(0.017)	98.40799999999999	0.00064547	222931000.0	7683.099999999999	5769.9	9601.2	8484.1	5578.7	5188.8	5210.35	6602.5	6596.200000000001	8493.699999999999	True	False	7345.360123484178	6723.277903469094	7586.039328161235	7740.312125415017	6312.396833058136	6191.462164071067	6378.903620377151	6370.286332667376	6289.544101742737	6955.40862436421	1.0560644988928474	0.9666258686683078	1.0906676714273809	1.1128479351020955	0.9075522624143666	0.8901651216267722	0.91711414309037	0.9158752097400576	0.9042666565571712	1.0	12.763919559030835	-7.775258121792319	24.979046329204213	0.916403703612583	1.052565102819803	0.6775810025086693	0.0451518341402749	134.50970753479027	243141.54786281084	0.014223430297480834	0.016210559016368448	1.6778065217931354e-08	7.775258121792319	0.13616139920722004	
KPVTVSPTTPTSPT(ph)EGEAS	ddPTM_K562_Methotrexat_30min_R1	1	KPVTVSPTTPTSPTEGEAS	19	1	Q9Y6G9;E9PHI6	Q9Y6G9	DYNC1LI1	Cytoplasmic dynein 1 light intermediate chain 1	1	KPVTVSPTTPT(0.001)S(0.061)PT(0.506)EGEAS(0.432)	82.007	0.028283	10419000.0	1328.7	916.89	1496.1	1249.7	853.73	875.44	719.44	1129.5	903.53	1322.8	True	False	1270.2919389404585	1068.390488034763	1182.0890554162006	1140.1407412844208	966.0104591189196	1044.6063900929641	880.7927338171406	1089.7748447933054	861.5250875121451	1083.2281018059234	1.172691085859634	0.9863024105943857	1.091265130073213	1.052539847686387	0.8917885877484324	0.9643457258461349	0.8131184303183338	1.0060437344419586	0.7953311828559819	1.0	10.081121356503507	-7.714728115974062	5.527828119510915	0.9096273881874003	1.0725988243054696	0.5136293369817524	0.07822034854959929	0.15313129207538073	10.604841703415653	0.02170214659390389	0.027670793944779993	1.9287319911779416e-08	7.714728115974062	0.1629714361180693	
KQAREES(ph)EESEAEPVQR	ddPTM_K562_Methotrexat_30min_R1	2	KQAREESEESEAEPVQR	17	2	Q9BW71	Q9BW71	HIRIP3	HIRA-interacting protein 3	1	KQAREES(0.993)EES(0.007)EAEPVQR;KQAREES(0.947)EES(0.053)EAEPVQR	103.9	0.0033364	44664000.0	4560.5	4406.6	9172.2	6798.4	4651.7	4328.1	4336.0	4491.5	4631.9	6523.5	True	False	4360.025880588512	5134.715750606923	7247.080565529359	6202.3948271969275	5263.480084667846	5164.4440703661685	5308.458375724343	4333.531399193567	4416.563979997906	5342.030935992551	0.816173835911794	0.9611916913492923	1.3566152372314648	1.1610555800805225	0.9852956951642755	0.9667566759245307	0.9937153938884911	0.8112142088125881	0.8267574697557057	1.0	12.38317261538498	-8.598669527387468	1.403273942982907	0.8763315512085614	1.0757932949697517	0.20413929004197728	0.14216661336216774	0.650765469532203	2.611630494074875	0.08492409522524208	0.05775518861084674	2.5195934612338607e-09	8.598669527387468	0.1994617437611903	
KQGGS(ph)PDEPDSK	ddPTM_K562_Methotrexat_30min_R1	1	KQGGSPDEPDSK	12	1	V9GZ50;Q9ULX6-2;Q9ULX6	V9GZ50	AKAP8L	A-kinase anchor protein 8-like	1	KQGGS(0.997)PDEPDS(0.003)K	78.40100000000001	0.024653	0.0	1814.5	1290.2	3029.6	1827.7	1165.1	1402.6	796.18	1316.9	1693.1	3235.2	True	False	1734.7367526209541	1503.3836203497144	2393.7283619336436	1667.4683786873118	1318.3310717902077	1673.632599315079	974.7436322841806	1270.5838805739745	1614.388150550411	2649.273930271036	0.6547970494102437	0.5674700540294486	0.9035412814743363	0.6294058004476419	0.49761976544846565	0.6317325589445018	0.36792859399951094	0.47959701941580135	0.6093700361084403	1.0	11.371381308215408	-10.06095134890208	21.436096649084554	1.0000000011234782	0.5900919391716628	0.4579557565015695	0.13279506551503714	4752.08980019879	1671269.2617998281	0.1384322201815844	0.03574304557665996	8.690577785475189e-11	10.06095134890208	-0.4099080619518154	
KQHTIWPSPHQGNS(ph)PDLEVY(ph)NVIRK	ddPTM_K562_Methotrexat_30min_R1	1	KQHTIWPSPHQGNSPDLEVYNVIRK	25	2	Q6UX15-3;Q6UX15-2;Q6UX15	Q6UX15-3	LAYN	Layilin	2	KQHT(0.027)IWPS(0.083)PHQGNS(0.892)PDLEVY(0.998)NVIRK	40.641999999999996	0.02905	21894000.0	184.33	250.34	207.29	245.26	130.92	176.89	175.48	174.76	263.96	0.0	True	False	176.22707391051	291.7044299475644	163.7826617854584	223.75843659071523	148.1382747564792	211.07148901528885	214.835856958512	168.61359174508902	251.6885572141556	0.0											0.0														
KQITT(ph)SPITVR	ddPTM_K562_Methotrexat_30min_R1	1	KQITTSPITVR	11	1	O95835-2;O95835	O95835-2	LATS1	Serine/threonine-protein kinase LATS1	1	KQIT(0.055)T(0.743)S(0.202)PITVR	101.72	0.030217	11613000.0	2969.0	2354.7	4026.8	2996.2	2294.1	2169.0	1954.2	2912.1	2843.2	3191.6	True	False	2838.4863149802222	2743.7741519434785	3181.6297094779484	2733.5277979006005	2595.814360822174	2588.1285526268375	2392.4790954429227	2809.6797924060056	2711.020252581024	2613.570312763674	1.0860569930405717	1.0498183800695695	1.2173499576193112	1.0458979368380106	0.9932062466983242	0.9902655153325746	0.9154064399029073	1.0750350884705908	1.0372861366466561	1.0	11.351806257241291	-7.5124936350400615	19.010740881595936	1.0024273633737926	1.1143953316521849	0.4733195128180625	0.054654723223788594	19.07326718424511	34914.41398816973	0.016219463374050874	0.022409546881834868	3.072602396573771e-08	7.5124936350400615	0.11196796827839228	
KQLVIYEEIS(ph)DPEEDDE	ddPTM_K562_Methotrexat_30min_R1	2	KQLVIYEEISDPEEDDE	17	1	Q16384;Q99909;Q7RTT5;Q7RTT3;Q16385	Q16384	SSX1;SSX3;SSX7;SSX9;SSX2	Protein SSX1;Protein SSX3;Protein SSX7;Protein SSX9;Protein SSX2	1	KQLVIYEEIS(1)DPEEDDE;KQLVIYEEIS(1)DPEEDDE	82.48299999999999	0.0089749	28442500.0	7127.8	5445.1	9988.9	7548.6	5295.1	5811.0	5616.299999999999	6773.9	7118.0	9115.7	True	False	6814.470446586739	6344.8102241251245	7892.366396395223	6886.8259579575715	5991.498462137437	6933.893508213265	6875.898241600697	6535.658097516933	6787.085733635242	7464.758397060981	0.9128855997897704	0.8499685973256949	1.05728356854826	0.9225785473069091	0.8026379613969027	0.9288838485306198	0.92111463973273	0.8755351144506093	0.9092170667315165	1.0	12.865879851786454	-12.301480089874925	3.098956011003337	1.0006075378143227	0.9087740336488774	0.16196138057497367	0.06216688365409933	20952283.437307656	27917712.155965287	121317.80943636544	0.01686694353869433	4.994820783179701e-13	12.301480089874925	-0.09183350416544522	
KQPPVS(ph)PGTALVGSQK	ddPTM_K562_Methotrexat_30min_R1	2	KQPPVSPGTALVGSQK	16	1	P17096;P17096-3	P17096	HMGA1	High mobility group protein HMG-I/HMG-Y	1	KQPPVS(0.917)PGT(0.083)ALVGSQK;KQPPVS(0.94)PGT(0.06)ALVGSQK	137.73	1.212e-14	35158000.0	5064.7	3463.86	8111.4	4265.91	3175.7799999999997	2994.2	2395.76	3853.61	4437.1	4809.8	True	False	4842.061852300546	4036.2039894470345	6408.9279888396295	3891.9242935525467	3593.4507348467123	3572.7867737553142	2933.070165642378	3718.076352053059	4230.820189479201	3938.698612085073	1.2293557667610544	1.0247557345623721	1.6271689255875468	0.9881244230292185	0.9123446825357392	0.9070982894687513	0.7446800211224249	0.9439860010219923	1.0741670298148263	1.0	11.9435033112902	-7.497584754639334	24.63973397567605	0.9201391228505197	1.2736575996603803	0.5148056990554857	0.1582949117446576	498.9805767039505	486073.89638848923	0.04418362683730778	0.06520626693528488	3.179913052573968e-08	7.497584754639334	0.3535184768098606	
KQQIENGS(ph)GAEDNGDSSHCSNASTHSNQEAGPSNKR	ddPTM_K562_Methotrexat_30min_R1	1	KQQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNKR	36	2	X6RFN3;Q99496-2;Q99496	X6RFN3	RNF2	E3 ubiquitin-protein ligase RING2	1	KQQIENGS(0.821)GAEDNGDS(0.049)S(0.049)HCS(0.049)NAS(0.013)T(0.014)HS(0.004)NQEAGPSNKR	48.088	0.0017774000000000002	3044900.0	456.27	387.75	745.87	321.45	393.54	143.1	204.89	477.3	392.09	685.83	True	False	436.2129171222719	451.81909687691973	589.322079916638	293.2689775833213	445.29740794122256	170.75204973762132	250.84179810935447	460.5130884637846	373.8618214808995	561.6195411714215	0.776705376405569	0.8044931911281419	1.0493261660508373	0.522184425726397	0.792880901210141	0.3040350935465459	0.4466400823342982	0.8199734067359019	0.6656852087110459	1.0	9.133449323886994	-7.272676875734018	24.974593026963138	0.6257386182007328	0.8696067470788186	0.2060928157502795	0.19969814055511134	1028.6709801634936	2286150.4786495487	0.05636241230191246	0.08446785630845353	5.337318555678776e-08	7.272676875734018	0.24386812887808573	
KQS(ph)LGELIGTLNAAK	ddPTM_K562_Methotrexat_30min_R1	2	KQSLGELIGTLNAAK	15	1	P60174;P60174-3	P60174	TPI1	Triosephosphate isomerase	1	KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK	88.176	0.010091	74460000.0	15600.1	7880.2	19222.3	15163.6	8926.2	7454.5	8006.5	14631.6	14049.3	23543.0	True	False	14914.338283032308	9182.26910950227	15187.801918272062	13834.230731007783	10100.151757800837	8894.97662312438	9802.161435709639	14116.998334730173	13396.151109519757	19279.134563665615	0.7735999888262924	0.47628015039677224	0.7877844240423387	0.7175752980676031	0.5238903086882369	0.46137841891971026	0.5084336853057327	0.7322423259255499	0.6948523060141293	1.0	14.234752670291016	-10.236131833964393	1.4024887636169554	0.9979463579426102	0.6095969155227698	0.4838482902276322	0.11776800044399471	0.7530565921667924	2.6976189935064045	0.11701966100439419	0.03463932339866461	5.805881480567181e-11	10.236131833964393	-0.3883494424198404	
KQSAGPNS(ph)PTGGGGGGGSGGTR	ddPTM_K562_Methotrexat_30min_R1	2	KQSAGPNSPTGGGGGGGSGGTR	22	1	H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2	H7BZ52	ZSWIM8	Zinc finger SWIM domain-containing protein 8	1	KQS(0.025)AGPNS(0.965)PT(0.01)GGGGGGGSGGTR;KQS(0.005)AGPNS(0.949)PT(0.022)GGGGGGGS(0.012)GGT(0.012)R	67.72800000000001	0.005414199999999999	3570800.0	1117.07	954.92	1605.7199999999998	1281.19	976.6899999999999	1077.98	889.8299999999999	1036.93	1322.44	1328.13	True	False	1067.9649403418507	1112.7042991352887	1268.7013154621357	1168.8700618757991	1105.141854353084	1286.2843785895259	1089.3970287063635	1000.4605841624807	1260.960053047006	1087.5927871571673	0.9819529450295258	1.0230890755020174	1.1665223698093508	1.074731347686739	1.0161356965613828	1.1826893243303993	1.0016589311463826	0.9198852695387587	1.1594045748896509	1.0	10.086922773311827	-11.886859579609633	5.139022864114777	0.9999998922362421	1.057732959355079	0.04266425437464971	0.0830028405220243	1.0437424457927958e-07	2.2560790105590087e-08	0.08021252504718242	0.019454358081672875	1.2975987556371387e-12	11.886859579609633	0.05773306711883697	
KQSFDDNDS(ph)EELEDKDSK	ddPTM_K562_Methotrexat_30min_R1	1	KQSFDDNDSEELEDKDSK	18	2	A0A087WUT6;O60841	A0A087WUT6	EIF5B	Eukaryotic translation initiation factor 5B	1	KQSFDDNDS(1)EELEDKDSK	108.5	0.0024636	23588000.0	1112.4	529.75	2498.2	1427.6	735.47	411.49	407.31	660.29	764.66	1556.1	True	False	1063.5002279501512	617.2821832896153	1973.8619599229687	1302.4445244919882	832.1971962660239	491.0046187738211	498.65963584323845	637.0672264440649	729.1111235011979	1274.275211082702	0.8345922597415486	0.4844182621783364	1.5490075791758164	1.0221061456460037	0.6530749315596732	0.38532070192013984	0.39132805182606256	0.499944769311469	0.5721771224614034	1.0	10.315461181396987	-7.877069063530415	4.402249819407806	0.5269940848269393	0.9774845279037059	0.2937406319105469	0.2931339905917373	0.26095634223891523	8.80360773652482	0.09494824114874179	0.10920145305309835	1.327183386066493e-08	7.877069063530415	0.45049044307676656	
KREEGS(ph)DIEDEDMEELLNDTR	ddPTM_K562_Methotrexat_30min_R1	5	KREEGSDIEDEDMEELLNDTR	21	2	F5H5U2;Q8NHQ9-2;Q8NHQ9	F5H5U2	DDX55	ATP-dependent RNA helicase DDX55	1	KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR	137.85	5.0692e-12	181502000.0	11234.9	8392.8	16618.8	12496.000000000002	8615.0	7672.7	7471.94	10194.199999999999	10828.899999999998	14909.7	True	False	10741.027248289414	9779.567546792041	13130.740989339452	11400.495081291603	9748.023503109289	9155.340684988447	9147.712748134169	9835.664207872436	10325.466802607845	12209.408852053053	0.879733603685757	0.8009861628270049	1.075460830941989	0.9337466882661212	0.7984025779814987	0.7498594564182316	0.7492346975173946	0.8055807064089378	0.8456975212908513	1.0	13.57570573000929	-7.761400400312363	24.99813409653935	0.8075499766955639	0.9247306470122162	0.198014977944878	0.09243753605746301	1.4550168127989165	932172.7034652904	0.028127191100679502	0.034023592314877546	1.732206243761304e-08	7.761400400312363	0.11718067031665225	
KRPT(ph)S(ph)T(ph)S(ph)SSPET(ph)PEFSTFR	ddPTM_K562_Methotrexat_30min_R1	1	KRPTSTSSSPETPEFSTFR	19	2	A8MVS5	A8MVS5	HIDE1	Protein HIDE1	5	KRPT(0.813)S(0.813)T(0.613)S(0.613)S(0.807)S(0.341)PET(0.661)PEFS(0.169)T(0.169)FR	42.059	0.034166	36099000.0	258.1	317.04	383.64	338.44	241.8	237.29	160.42	353.93	331.32	315.87	True	False	246.75423304021393	369.4254712414151	303.11920675079955	308.76949066199836	273.60093825325924	283.14293418756245	196.39826859633285	341.4820812905663	315.91700551672227	258.66288215711916	0.9539607344602633	1.4282121507368637	1.1718697488520071	1.193713949550918	1.0577510618128283	1.0946407610797957	0.7592827658861196	1.3201820007678584	1.2213464988951346	1.0	8.01492923347719	-7.7330979162444695	7.784459648061734	1.076666470495807	1.2035838196656963	0.08688636715552234	0.17360543756125973	0.491174695724641	106.9559982369746	0.05217881725371822	0.0662804394273389	1.8488517289764518e-08	7.7330979162444695	0.12691734916988917	
KRS(ph)VQEGENPDDGVR	ddPTM_K562_Methotrexat_30min_R1	2	KRSVQEGENPDDGVR	15	2	H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696	H7C5M1	RBM34	RNA-binding protein 34	1	KRS(1)VQEGENPDDGVR;KRS(1)VQEGENPDDGVR	91.81200000000001	0.0059469	21283000.0	3758.4	2643.6	4250.3	3649.2	2682.6	2413.0	2211.1000000000004	2771.3999999999996	3184.5	3621.1000000000004	True	False	3593.185236181094	3080.4099664831097	3358.220113786162	3329.280301748502	3035.408920422634	2879.278099349267	2706.995460000946	2673.9282911555274	3036.4532900760655	2965.283700823579	1.2117509144852217	1.038824705247446	1.1325122492844273	1.1227527068738234	1.0236487387630324	0.9709958269927345	0.9128959428904236	0.9017445077558244	1.0240009376616208	1.0	11.533954424573752	-7.978096580173605	2.2441650674114673	0.9517710016081127	1.1223554565190035	0.6872979071343163	0.05206568005195867	0.1723305370334891	1.7513720913614745	0.018116571379916492	0.02009332007441297	1.0517279602726059e-08	7.978096580173605	0.1705844549108908	
KRS(ph)WSSEEESNQATGTSR	ddPTM_K562_Methotrexat_30min_R1	1	KRSWSSEEESNQATGTSR	18	2	F6UZG9;Q8NFZ0;Q8NFZ0-2	F6UZG9	FBXO18	F-box only protein 18	1	KRS(0.987)WS(0.011)S(0.001)EEES(0.001)NQATGTSR	116.04	0.0014735999999999998	13173000.0	2182.2	1812.0	3538.6	2903.6	1890.7	1608.1	1767.0	2133.9	2427.0	2677.5	True	False	2086.273100892501	2111.402201266225	2795.896217830205	2649.0458961298255	2139.360190055571	1918.842565919419	2163.2947301441222	2058.849527493965	2314.1692997376695	2192.578804494528	0.9515156748828765	0.962976654220181	1.2751633884715785	1.2081873138149442	0.9757278441578177	0.8751532952822576	0.9866440037227502	0.9390082232271727	1.0554554732509023	1.0	11.098412980837374	-7.887507732892495	9.402260858441815	0.9637086412458165	1.1020547986116158	0.27505754383980274	0.10097521479165873	0.394779028549482	31.09876449180375	0.034115021229825786	0.03871624291153603	1.2956636271876539e-08	7.887507732892495	0.13834615736579936	
KRYFPGSDPT(ph)LS(ph)VLQNT(ph)PIHVVKDTLK	ddPTM_K562_Methotrexat_30min_R1	1	KRYFPGSDPTLSVLQNTPIHVVKDTLK	27	3	Q9NZJ4-2;Q9NZJ4	Q9NZJ4-2	SACS	Sacsin	3	KRY(0.021)FPGS(0.067)DPT(0.852)LS(0.949)VLQNT(0.951)PIHVVKDT(0.16)LK	40.669000000000004	0.028812	7244200.0	1501.9	421.88	582.39	1168.5	668.82	714.1	964.63	3256.4	3088.5	3836.5	True	False	1435.8782743242828	491.5884992661121	460.1542978302528	1066.059419213287	756.7815530295479	852.089718501994	1180.972832789432	3141.870566254909	2944.916309122288	3141.672673554902	0.45704260867493274	0.15647349369145583	0.14646793146326528	0.3393286093063944	0.2408849143960073	0.27122167298792066	0.3759057532410351	1.0000629895983986	0.9373720992359215	1.0	11.617317160762418	-9.206253746504926	3.794719903387735	0.9851518768207908	0.26401160938512047	0.9318392262926116	0.08644448061140561	0.05317215444108944	1.5640132326360483	0.04610219101275147	0.024073968746764637	6.219367981627978e-10	9.206253746504926	-0.7211402674356703	down
KS(ph)ASPEVSEGHENQHGQESEAK	ddPTM_K562_Methotrexat_30min_R1	1	KSASPEVSEGHENQHGQESEAK	22	1	O60930	O60930	RNASEH1	Ribonuclease H1	1	KS(0.439)AS(0.439)PEVS(0.122)EGHENQHGQESEAK	80.082	0.003351	9359300.0	2914.2	1893.2	4770.0	3332.1	1961.2	1757.2	1646.9	2189.6	2606.7	4252.7	True	False	2786.0952573645527	2206.019121102218	3768.842185906878	3039.9799664189923	2219.1321757745727	2096.75403074038	2016.2592479198402	2112.5905269229042	2485.5150859605214	3482.494820494445	0.8000285430342672	0.6334594119479572	1.082224778548781	0.8729316547805736	0.6372248316680914	0.6020838906639588	0.5789697765102696	0.6066313478746133	0.7137168076556185	1.0	11.765905491773601	-5.916828685291042	18.243246262562145	0.7351553003970311	2.93557354844118	0.0038688106943887135	0.169880730362752	35654267.69992196	67590046.84711593	0.04489652561229616	3170773528.5452313	1.2110757683945913e-06	5.916828685291042	2.2004182480441488	
KS(ph)PRPAGPQLFLPDPDPQR	ddPTM_K562_Methotrexat_30min_R1	1	KSPRPAGPQLFLPDPDPQR	19	2	Q9BUH6	Q9BUH6	C9orf142	Protein PAXX	1	KS(1)PRPAGPQLFLPDPDPQR	60.735	0.023215	9987800.0	1606.7	1470.3	2340.2	1737.6	1610.7	1701.5	944.49	1785.7	1835.4	2198.5	True	False	1536.0713918082595	1713.2420841731414	1849.024000725215	1585.2673057980392	1822.5352822354196	2030.2907940500547	1156.3159251125194	1722.895918855606	1750.0726546100216	1800.3303460994277	0.8532164083865451	0.9516265100374658	1.0270470665182567	0.880542456684496	1.0123338120607148	1.1277323622572137	0.6422798613697638	0.9569887674161632	0.9720841835509278	1.0	10.814045938412402	-11.356044253298252	13.703907188727136	1.0000121085078808	0.9373560329761408	0.024034535383683497	0.12209899135453808	0.0	0.0	0.11753617674241364	0.0285067100906022	4.405099745813533e-12	11.356044253298252	-0.06265607553174002	
KS(ph)S(ph)S(ph)LK	ddPTM_K562_Methotrexat_30min_R1	1	KSSSLK	6	1	B9EGQ5;A0A669KBG4;M0QXA7;A0A669KBH9;A0A2R8YFV2;A0A669KAV7;O95785-4;O95785-3;O95785;A0A087X139;H7C164;A0A1W2PRD7;E7EPJ7;Q0VDD8-4;A0A1W2PR53;H7BXS7;E7EWP2;O75962-5;O75962-2;O75962-4;O75962	B9EGQ5;Q0VDD8-4;E7EWP2	WIZ;TRIO;DNAH14	Protein Wiz;Dynein heavy chain 14, axonemal;Triple functional domain protein	3	KS(1)S(1)S(1)LK	72.87899999999999	0.020269	3467300.0	0.0	117.22	180.35	0.0	187.41	139.43	0.0	119.97	0.0	173.72	True	False	0.0	136.58861260067712	142.49699962857548	0.0	212.05769990919472	166.37287417831263	0.0	115.75058710035665	0.0	142.25762461878222	0.0	0.9601496789131919	1.0016826866780233	0.0	1.4906596428659673	1.1695181514815374	0.0	0.8136687745949762	0.0	1.0	7.152362168878923	-6.248282598569272	24.019599875667048	0.7119551823002617	3.211812933697897e-07	0.1515842051120656	0.5074685358665078	2511.6182279611944	4585185.19105366	0.12493296533252396	2.190820383174949	5.645694858022057e-07	6.248282598569272	-0.7119548611189683	
KS(ph)SVNGSSATSSG	ddPTM_K562_Methotrexat_30min_R1	1	KSSVNGSSATSSG	13	1	R4GMX3;P35226	R4GMX3	COMMD3-BMI1;BMI1	Polycomb complex protein BMI-1	1	KS(0.421)S(0.421)VNGS(0.145)S(0.013)ATSSG	91.62	0.012192	6609800.0	3854.8	3089.5	4535.7	4785.6	2721.0	2465.0	2805.8	3439.8	2914.8	4018.1	True	False	3685.3476076071934	3599.9873624790284	3583.7185540079304	4366.053878123327	3078.859193495112	2941.326363404867	3435.0720734795586	3318.8202843028	2779.291584209048	3290.383153814925	1.1200360065466357	1.0940936645342179	1.0891493137669719	1.3269135155464347	0.9357144896409499	0.893916065669934	1.0439732739018186	1.0086424982011302	0.8446711079792305	1.0	11.684039875286166	-7.802123621835298	24.999999226127798	0.9563640392418552	1.1481303508636793	0.5908603985129814	0.08262294569938375	111.88302169280568	68750.18708655998	0.02588004518589239	0.029345520317158817	1.577162266881953e-08	7.802123621835298	0.19176631162182411	
KS(ph)VFDEELTNT(ph)S(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	KSVFDEELTNTSK	13	1	B7Z6D5;Q96GQ7	B7Z6D5	DDX27	Probable ATP-dependent RNA helicase DDX27	3	KS(1)VFDEELT(0.046)NT(0.977)S(0.977)K	75.73899999999999	0.016316999999999998	49408000.0	1561.8	1357.8	1111.3	1272.2	1400.1	1351.5	1422.3	2057.0	2254.0	2076.1	True	False	1493.1451420465178	1582.1533713461822	878.053316813063	1160.6682012179233	1584.2376908535477	1612.6582475219782	1741.2869805795062	1984.6541440813007	2149.2120319772184	1700.0981721796775	0.8782699531593359	0.9306247116998664	0.516472125658085	0.682706575544307	0.9318507111988796	0.9485677203301774	1.0242273117363694	1.1673762001266064	1.2641693680675727	1.0	10.731402341864717	-8.507262522850894	1.279942430589852	1.1522275180411525	0.7585441390802162	0.6046360958819252	0.12836709414953193	0.3159124490286133	1.0550156209493846	0.07578289061798886	0.05511139425552404	3.1098359314632386e-09	8.507262522850894	-0.3936833789609363	
KSAEPSANTTLVS(ph)ETEEEGSVPAFGAAAK	ddPTM_K562_Methotrexat_30min_R1	2	KSAEPSANTTLVSETEEEGSVPAFGAAAK	29	1	Q13428;Q13428-3;Q13428-4;E7ETY2;Q13428-6;Q13428-7;Q13428-2;Q13428-8;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857	Q13428	TCOF1	Treacle protein	1	KSAEPSANTTLVS(0.581)ET(0.407)EEEGS(0.012)VPAFGAAAK;KSAEPSANTTLVS(0.494)ET(0.494)EEEGS(0.011)VPAFGAAAK	119.87	4.6439e-14	32709000.0	3482.36	2408.92	6170.9	3718.68	2296.76	1974.77	1962.52	3170.1000000000004	2941.68	4972.200000000001	True	False	3329.2796240601297	2806.953085361059	4875.712420338103	3392.6690980231633	2598.8241974464645	2356.366354020702	2402.665067233982	3058.6057861702175	2804.921938876107	4071.6863983968956	0.8176660229459061	0.6893834177568814	1.1974675707485154	0.8332343815473915	0.6382672787544919	0.5787200003783324	0.5900908940776871	0.7511889391517116	0.6888845712627724	1.0	11.991410733870312	-7.622000780623303	5.4804311142808375	0.6843037894073157	0.9008639825819482	0.21822992122012397	0.1632546646304566	0.2804642133003791	12.845428544090982	0.048479977484503396	0.06296560429924385	2.3878069909418713e-08	7.622000780623303	0.2165601931746325	
KSDSDMWINQSSSLDS(ph)STSSQEHLNHSSK	ddPTM_K562_Methotrexat_30min_R1	1	KSDSDMWINQSSSLDSSTSSQEHLNHSSK	29	1	A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6	A8MQ02	MLLT4	Afadin	1	KSDSDMWINQS(0.009)S(0.009)S(0.009)LDS(0.193)S(0.193)T(0.193)S(0.193)S(0.193)QEHLNHS(0.005)S(0.002)K	65.836	0.00014101	15651000.0	1360.1	854.62	1873.2	1649.1	1162.0	697.8	667.35	1080.4	1466.8	1686.4	True	False	1300.3116325377569	995.8314289437872	1480.0409187926125	1504.5259633929231	1314.8233674536275	832.6399741922585	817.0202253320209	1042.4017196234508	1398.6087881562478	1380.9766184498865	0.941588449192808	0.7211066542615213	1.0717349584484084	1.0894651967979863	0.9520967624560404	0.6029356059097345	0.5916249518033888	0.7548293763246492	1.0127678987977022	1.0	10.431473177949607	-8.157365228300208	11.147628376155943	0.7646131110871158	0.9565004219504567	0.1936205748260017	0.16116626559033634	0.8656615100605601	88.22263781941365	0.0558488437911277	0.05586033171621437	6.960409189092017e-09	8.157365228300208	0.19188731086334088	
KSEAGHASS(ph)PDSEVTSLCQK	ddPTM_K562_Methotrexat_30min_R1	1	KSEAGHASSPDSEVTSLCQK	20	1	Q6NZY4-2;Q6NZY4	Q6NZY4-2	ZCCHC8	Zinc finger CCHC domain-containing protein 8	1	KS(0.001)EAGHAS(0.418)S(0.58)PDS(0.001)EVTSLCQK	79.51100000000001	0.0031081999999999998	25084000.0	3765.0	2119.1	5429.2	3837.8	2133.6	1695.0	1844.0	3080.9	3199.4	4429.6	True	False	3599.4951080837072	2469.2452564587516	4289.685114407886	3501.3460325688934	2414.2057975895514	2022.534761043103	2257.5639402296347	2972.5430007292557	3050.6605923282655	3627.3565162983973	0.9923190874430171	0.6807285816445025	1.1825926387807544	0.9652610701034444	0.6655551464936157	0.5575781569733972	0.6223716720664136	0.8194791406284602	0.8410148212950869	1.0	11.824702832842789	-7.754068067523349	24.82252127628757	0.7258712849043998	0.9518590077243975	0.26397820310621856	0.1638310662353837	201.58966402574168	678838.8733368831	0.04968521826731401	0.06282798132964816	1.7616999113177817e-08	7.754068067523349	0.22598772281999768	
KSIPLKMCY(ph)VT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	KSIPLKMCYVTR	12	2	A0A3B3ITC2;Q13884-2;Q13884	A0A3B3ITC2	SNTB1	Beta-1-syntrophin	2	KS(0.001)IPLKMCY(0.999)VT(1)R	52.00899999999999	0.033951	9944700.0	1202.8	1452.2	1623.3	1149.8	1509.3	1401.8	1434.0	1575.7	1803.6	1639.6	True	False	1149.926352192054	1692.1513668205375	1282.5915137070501	1048.9988191796635	1707.7994049034085	1672.6780106372998	1755.6110034106796	1520.2817378847383	1719.7510296690818	1342.6525519511579	0.8564586203042389	1.2603047336121949	0.9552668796131759	0.7812883665660536	1.2719593035604149	1.2458010884547497	1.307569110757214	1.132297209486883	1.2808608058502702	1.0	10.39087030094717	-7.787705915332585	24.99433684963452	1.2200565587235557	0.983966114878082	0.40363873819662555	0.14330461424006027	228.3038441877909	217244.81526610575	0.04404684811390386	0.04995941487508827	1.630399692179992e-08	7.787705915332585	-0.23609044384547362	
KSLLGS(ph)TA	ddPTM_K562_Methotrexat_30min_R1	1	KSLLGSTA	8	1	C9JWC4	C9JWC4	HJURP		1	KSLLGS(0.737)T(0.263)A	73.665	0.03059	6487600.0	0.0	53.246	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	62.04399647274912	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
KSLMT(ph)S(ph)LTFIHT(ph)V	ddPTM_K562_Methotrexat_30min_R1	1	KSLMTSLTFIHTV	13	1	Q9BXJ9-4	Q9BXJ9-4	NAA15	N-alpha-acetyltransferase 15, NatA auxiliary subunit	3	KS(0.027)LMT(0.979)S(0.986)LT(0.185)FIHT(0.824)V	42.475	0.032335	8871900.0	157.47	262.52	217.92	290.07	183.41	173.77	178.53	254.96	264.82	154.43	True	False	150.54780734925413	305.89696792296337	172.1815700530035	264.6400134627286	207.53162979747836	207.34859317195287	218.56989709826274	245.99291228729632	252.5085760018664	126.46123054270396	1.1904660954442992	2.4188991883932904	1.3615364117057243	2.092657269955663	1.6410691949371645	1.639621821503109	1.7283549761478492	1.9452041644037965	1.9967271781101186	1.0	6.982551352745145														
KSNLDEEVNVIPPHT(ph)PVR	ddPTM_K562_Methotrexat_30min_R1	5	KSNLDEEVNVIPPHTPVR	18	1	A0A3B3IS71;P06400	A0A3B3IS71	RB1	Retinoblastoma-associated protein	1	KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR	147.26	4.6495e-12	383098000.0	27948.299999999996	21273.6	28305.9	28584.800000000003	20562.300000000003	18505.0	18950.0	27332.5	31091.5	41204.2	True	False	26719.72619634952	24788.700810627568	22364.87841301079	26078.814964765053	23266.602864536777	22080.829352862926	23200.01988468088	26371.200482791508	29646.06295129535	33741.72010313852	0.7918898655633195	0.7346602584235716	0.6628256752959817	0.7728952431900266	0.6895499931069788	0.6544073415750092	0.6875766799607501	0.7815606436833243	0.878617416678108	1.0	15.04224590151556	-9.87147090374824	1.8093250259614913	0.9966487101557115	0.7117333473365316	0.8238472773883598	0.042898315993378754	0.12995388080128578	0.9070692815026217	0.04228228125459901	0.012228725545074096	1.3444018340001207e-10	9.87147090374824	-0.28491536281917995	
KSQRT(ph)MLAVVDY(ph)MR	ddPTM_K562_Methotrexat_30min_R1	2	KSQRTMLAVVDYMR	14	2	Q13315	Q13315	ATM	Serine-protein kinase ATM	2	KS(0.329)QRT(0.673)MLAVVDY(0.999)MR;KS(0.004)QRT(0.996)MLAVVDY(1)MR	84.169	0.008457	4135200.0	625.53	514.34	595.88	692.9	615.02	607.54	679.89	580.76	622.39	757.72	True	False	598.0324501884731	599.325942714829	470.8129311820102	632.1545327966509	695.9059100269617	724.9385066219037	832.3726395459468	560.3343416220985	593.4552247481373	620.4895655430792	0.9638074246503234	0.9658920568475203	0.7587765489173608	1.0187996187226163	1.1215432920582233	1.1683331144938858	1.3414772556528303	0.9030519975491768	0.9564306278522504	1.0	9.277263139266813	-7.503021524382155	10.241581907821987	1.0921392734172977	0.9006582150987652	0.299114510008781	0.12644141500500394	0.6013745590882705	302.4749049307008	0.038609969824503175	0.055070078933224666	3.14035304871606e-08	7.503021524382155	-0.19148105831853246	
KSS(ph)LVTSK	ddPTM_K562_Methotrexat_30min_R1	1	KSSLVTSK	8	1	A6NMQ3;Q5T5H1;O43768-6;O43768-5;O43768-2;O43768;O43768-9;O43768-7;O43768-3;O43768-4;A0A1W2PRU0	A6NMQ3	ENSA	Alpha-endosulfine	1	KS(0.008)S(0.989)LVT(0.003)SK	131.42	0.00021236	73555000.0	3251.5	2324.3	9535.4	2977.4	3257.1	2682.9	2042.1	4480.6	2900.8	6044.8	True	False	3108.5679532361696	2708.351068655126	7534.049848951036	2716.375964711717	3685.465740217907	3201.332454514776	2500.0929079950834	4323.0147583717435	2765.9424411532877	4950.02814469039	0.627989955283497	0.5471385191133141	1.5220216186108715	0.5487597010181482	0.7445343001071809	0.6467301520191681	0.5050664026378898	0.8733313492386487	0.5587730736683093	1.0	12.273221012700763														
KSS(ph)PPASSPQPEAPTSSWR	ddPTM_K562_Methotrexat_30min_R1	2	KSSPPASSPQPEAPTSSWR	19	1	P43250-2	P43250-2			1	KS(0.184)S(0.815)PPAS(0.001)SPQPEAPTSSWR;KS(0.245)S(0.755)PPASSPQPEAPTSSWR	145.73	2.5955e-12	35124000.0	2708.0	1907.3	3622.1000000000004	3300.0	2102.48	2253.04	2044.64	2329.0	2421.5	3024.1	True	False	2588.959562467645	2222.4489064431973	2861.8707089252184	3010.6941235805275	2378.992972120398	2688.408093227467	2503.2025676524504	2247.087749910234	2308.9249935371936	2476.4061858718596	1.045450288905719	0.8974492630177094	1.1556548054404288	1.215751333830788	0.9606634750360367	1.0856086972182104	1.010820673092107	0.9073986984566951	0.932369256186581	1.0	11.274032252801362	-9.038988924220968	4.372426527235998	0.9411192283551267	1.0592775652250088	0.25430324270399074	0.08680269851446623	0.3103930793874905	13.254933692594971	0.0438722328945894	0.025649367762260858	9.141365543277654e-10	9.038988924220968	0.11815833686988209	
KSS(ph)S(ph)LVDIREEET(ph)EGGS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	KSSSLVDIREEETEGGSR	18	2	Q96Q42-3;Q96Q42	Q96Q42-3	ALS2	Alsin	4	KS(0.528)S(0.578)S(0.894)LVDIREEET(1)EGGS(1)R	54.235	0.031769	2823700.0	699.85	696.49	620.76	762.87	737.89	614.92	802.83	587.87	699.77	746.32	True	False	669.085431976729	811.5731341942127	490.4709591873278	695.9903715320839	834.9354686836122	733.7445871744101	982.885064064293	567.1942788921123	667.2378454377539	611.1542160113374	1.0947898491864725	1.3279350987560843	0.8025322354615471	1.1388130087270358	1.3661616770522669	1.2005882769870289	1.6082439396050239	0.9280706310002619	1.0917667389950168	1.0	9.25539265918331	-7.528008564506715	24.86872334992454	1.219380521722092	1.0787543220072535	0.05841757752030163	0.21471702210232424	357.57276264758787	1733455.2214714126	0.06408107829704404	0.08302080373905038	2.9647729221271513e-08	7.528008564506715	-0.14062619971483858	
KSSEAS(ph)PTAQR	ddPTM_K562_Methotrexat_30min_R1	3	KSSEASPTAQR	11	1	J3KNN7;Q7Z569	J3KNN7	BRAP	BRCA1-associated protein	1	KSSEAS(0.994)PT(0.005)AQR;KSSEAS(0.879)PT(0.12)AQR;KS(0.001)S(0.001)EAS(0.767)PT(0.231)AQR	117.27	0.0020976999999999997	3509670.0	1387.88	846.75	1726.24	1461.8400000000001	1079.07	857.0699999999999	774.12	1306.7	1180.68	1411.88	True	False	1326.8704570005896	986.6610452109143	1363.9258144653845	1333.682756853018	1220.9866188624667	1022.6866475794764	947.7361157324099	1260.7426203553903	1125.790444505263	1156.174850603075	1.1476382281697943	0.853383936431639	1.17968818795353	1.1535303299127746	1.0560570645742597	0.8845432393258084	0.8197169444033998	1.090442868306443	0.9737198866746123	1.0	10.17514388061694	-8.121246652505707	6.486370977372154	0.9514551247555553	1.0775368250429798	0.252781647655534	0.10743803536174557	0.38057639517921404	18.687962936629532	0.036835087563839346	0.03692857363097487	7.564031826071698e-09	8.121246652505707	0.1260817002874245	
KSTGES(ph)S(ph)SVS(ph)ERGSLKQQLR	ddPTM_K562_Methotrexat_30min_R1	1	KSTGESSSVSERGSLKQQLR	20	3	H0Y5C5;P07492-2;P07492-3;P07492	H0Y5C5	GRP	Gastrin-releasing peptide;Neuromedin-C	3	KS(0.052)T(0.055)GES(0.857)S(0.518)S(0.518)VS(0.998)ERGS(0.001)LKQQLR	68.375	0.031275	21569000.0	605.23	726.16	536.15	418.63	662.91	730.54	666.18	692.59	801.61	494.67	True	False	578.6248138819394	846.1455973904427	423.6194419232644	381.9293578650048	750.0942844394874	871.706515830342	815.5878230489036	668.2312171362507	764.3433260662187	405.0804695496949	1.4284194311445426	2.088833357804327	1.0457661471415254	0.9428481167941128	1.851716734883133	2.151934199146577	2.013397051592111	1.6496258579908474	1.8868925646202988	1.0	8.662064718731344	-7.867568677069851	19.51598059344281	1.8238772983033937	1.4024980870091548	0.16224211257688526	0.40838074959261217	3.9701441360563767	711.9148499807794	0.12879874416013645	0.1460446931736221	1.3565359977927812e-08	7.867568677069851	-0.42137921129423894	
KSTGSVDYLALDFQPS(ph)SPSPHR	ddPTM_K562_Methotrexat_30min_R1	1	KSTGSVDYLALDFQPSSPSPHR	22	1	Q9UQC2;Q9UQC2-2	Q9UQC2	GAB2	GRB2-associated-binding protein 2	1	KSTGSVDYLALDFQPS(0.333)S(0.333)PS(0.333)PHR	142.4	1.5354000000000002e-13	7240500.0	1733.0	1509.2	2263.3	1989.7	1550.7	1387.2	1220.2	2068.0	1940.9	2306.8	True	False	1656.8193950356094	1758.5696479861967	1788.264259824536	1815.2660902085395	1754.6442305596731	1655.2567672678426	1493.8609109914316	1995.2672678464407	1850.6679826373472	1889.0161666509716	0.8770805799788242	0.9309447314598461	0.9466643490907449	0.960958472593073	0.9288667093148674	0.8762533621945862	0.7908142541944948	1.0562467929450499	0.9796993881309064	1.0	10.883419333369513	-9.290723766920669	24.999962302575856	1.013479823373887	0.9068628597986286	0.5136405838117888	0.049007812639269954	662.5511968613064	565613.4016080843	0.028494481896780343	0.013691668451520906	5.120073943840298e-10	9.290723766920669	-0.10661696357525852	
KSYESSEDCSEAAGS(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	5	KSYESSEDCSEAAGSPAR	18	1	Q6P6C2-3;Q6P6C2;K7ER58	Q6P6C2-3	ALKBH5	RNA demethylase ALKBH5	1	KSYESSEDCSEAAGS(1)PAR;KSYESSEDCSEAAGS(1)PAR;KSYESSEDCSEAAGS(1)PAR;KSYESSEDCSEAAGS(1)PAR;KSYESSEDCSEAAGS(1)PAR	138.77	7.3401e-09	91966800.0	9931.64	7452.16	14655.1	12200.699999999999	8433.44	7857.1900000000005	7126.49	10567.6	10519.23	14398.000000000002	True	False	9495.056997409956	8683.502774938257	11579.194783791163	11131.08357380877	9542.58518073848	9375.480766442632	8724.786791977811	10195.9315182273	10030.193293316637	11790.382680527442	0.8053222066397929	0.736490325227493	0.9820881219500136	0.9440816193517156	0.8093533042399599	0.7951803618661867	0.7399918245560718	0.8647668014259217	0.8507097322534011	1.0	13.525322924189387	-10.421753638761595	1.9093510600016321	0.9999293869603846	0.8348525993957677	0.30250481273099883	0.07496876993006964	3.7819970881632665	15.41966676249626	0.0783854925176285	0.021818235654685877	3.786573238789387e-11	10.421753638761595	-0.16507678756461686	
KT(ph)ASPEDSDMPDHDLEPPR	ddPTM_K562_Methotrexat_30min_R1	1	KTASPEDSDMPDHDLEPPR	19	1	E7EMW7;O95071-2;O95071	E7EMW7	UBR5	E3 ubiquitin-protein ligase UBR5	1	KT(0.675)AS(0.257)PEDS(0.068)DMPDHDLEPPR	60.09	0.021915	0.0	844.99	503.01	1067.9	883.32	772.92	662.24	836.2	907.58	830.79	957.74	True	False	807.8452513624572	586.1238527919006	843.7623837169715	805.8807070427737	874.5725276869681	790.2085074650058	1023.7391360195337	875.6598969787592	792.1667542352936	784.28400530965	1.0300417270954096	0.7473362312935198	1.0758378062087832	1.0275368381694803	1.1151222283841815	1.0075540264945435	1.3053168610972021	1.1165086767682229	1.0100508857407227	1.0	9.61523236816686	-6.873348064531631	8.704650749137697	1.0920050820637144	0.8894471684025337	0.34424516520275183	0.1063586391181393	0.2439005585151396	17.551531382205486	0.027283750011766916	0.05710050440807124	1.3386034360887508e-07	6.873348064531631	-0.2025579136611807	
KT(ph)PEGRASPAPGSGHPEGPGAHLDMNSLDR	ddPTM_K562_Methotrexat_30min_R1	1	KTPEGRASPAPGSGHPEGPGAHLDMNSLDR	30	2	O94826	O94826	TOMM70A	Mitochondrial import receptor subunit TOM70	1	KT(0.407)PEGRAS(0.407)PAPGS(0.186)GHPEGPGAHLDMNSLDR	49.588	0.0030336	190490000.0	3222.3	1784.3	4046.3	3833.3	2134.9	2216.5	2207.1	2805.8	2839.0	3622.0	True	False	3080.651550273079	2079.1252470857203	3197.036925961215	3497.2405405821924	2415.676770375859	2644.8072553699335	2702.0983581783203	2707.1184236574204	2707.0155096642943	2966.020702102401	1.0386480269977294	0.7009813672615219	1.0778875965683796	1.1791018646981282	0.8144504078017923	0.8917022236207649	0.911018037150919	0.9127105625859376	0.9126758649207956	1.0	11.534312952149923	-6.783024066650042	24.999877722576308	0.9574150489188389	0.8698142582857248	0.08103264022479073	0.12385130792888349	592.9710748256731	686792.3013498738	0.03333493544781706	0.06948963584146334	1.6480710602972433e-07	6.783024066650042	-0.0876007906331141	
KT(ph)S(ph)QATRGDHWKWS(ph)S(ph)SR	ddPTM_K562_Methotrexat_30min_R1	1	KTSQATRGDHWKWSSSR	17	3	M0R247	M0R247	HNRNPUL1		4	KT(0.969)S(0.973)QAT(0.058)RGDHWKWS(0.981)S(0.596)S(0.423)R	53.964	0.030751	20472000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
KT(ph)S(ph)QATRGDHWKWS(ph)SS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	KTSQATRGDHWKWSSSR	17	3	M0R247	M0R247	HNRNPUL1		4	KT(0.98)S(0.983)QAT(0.037)RGDHWKWS(0.957)S(0.347)S(0.696)R	54.869	0.029825	20970000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
KTAPTLS(ph)PEHWK	ddPTM_K562_Methotrexat_30min_R1	1	KTAPTLSPEHWK	12	1	Q96JM3	Q96JM3	CHAMP1	Chromosome alignment-maintaining phosphoprotein 1	1	KTAPT(0.032)LS(0.968)PEHWK	105.63	0.0026631	32972000.0	2597.9	1948.1	3787.4	3079.7	1895.8	1814.1	1691.4	2652.4	2303.0	3537.5	True	False	2483.6994266376264	2269.990412961773	2992.4764978833764	2809.707482542714	2145.1309294480097	2164.6491504473706	2070.7395056965306	2559.113588605367	2195.934032672374	2896.8244709241435	0.8573869254305484	0.7836133793213925	1.0330196143809562	0.9699267286451645	0.7405111876742988	0.7472489866660114	0.7148308523629409	0.8834203156910505	0.7580487028859668	1.0	11.500256553806363	-7.763211681168597	24.998654882186077	0.7938840144114154	0.9106052098366637	0.1972070344369068	0.10026019830081916	71.30344067666651	1005751.7359665474	0.030768007367668136	0.03671926584209941	1.7249968995791876e-08	7.763211681168597	0.11672119542524828	
KTGS(ph)YGALAEITASK	ddPTM_K562_Methotrexat_30min_R1	2	KTGSYGALAEITASK	15	1	O14974-5;O14974-4;O14974-3;O14974-2;O14974;H0YIS4;H0YHI8;A0A3B3ISH4;F8VZN8	O14974-5	PPP1R12A	Protein phosphatase 1 regulatory subunit 12A	1	KT(0.441)GS(0.554)Y(0.005)GALAEITASK;KT(0.343)GS(0.656)Y(0.001)GALAEITASK	81.60600000000001	0.022168	55715000.0	10381.4	7143.9	16360.4	11820.1	7051.9	6024.1	6716.8	8907.4	9738.1	13189.4	True	False	9925.046086337377	8324.308049462352	12926.575618094519	10783.850184889156	7979.348455203298	7188.172067256498	8223.213380550116	8594.121693237614	9285.377856520567	10800.671852100879	0.9189285835405526	0.7707213184004993	1.1968306967478253	0.9984425351087348	0.7387826020888881	0.6655300860620351	0.7613612831826372	0.7957025091514043	0.8597037280337735	1.0	13.398833437081409	-7.7577220884253135	24.966526169565835	0.7842917177498703	0.973022985400805	0.2851698924265442	0.12792055836840294	114.96826067148521	772158.1462885824	0.03933340133979981	0.048812677183590954	1.7469396883148347e-08	7.7577220884253135	0.18873126765093473	
KTQMAEVLPS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	KTQMAEVLPSPR	12	1	P11388;P11388-2;P11388-3;P11388-4	P11388	TOP2A	DNA topoisomerase 2-alpha	1	KTQMAEVLPS(1)PR;KTQMAEVLPS(1)PR	93.478	0.031580000000000004	101234000.0	11935.7	8830.3	13707.2	13108.599999999999	9552.2	9197.0	9179.5	12092.099999999999	12781.900000000001	15148.4	True	False	11411.020919403652	10289.356985563552	10830.246039971229	11959.38939041446	10808.48173028446	10974.190086910578	11238.236545194095	11666.813989132468	12187.672258886245	12404.87796900277	0.9198817552189904	0.8294605566676699	0.8730634889785921	0.9640876291003029	0.8713089929052609	0.8846673150943374	0.9059530108459051	0.9405021168515667	0.9824902985213335	1.0	13.598619922568549	-9.549489978458633	1.4823235472399992	1.0001840002939972	0.8890892973166983	0.5979842526635099	0.0328264724745218	0.28817976184421945	1.1343859388824278	0.030738909765853622	0.010042684399481356	2.8216946942193686e-10	9.549489978458633	-0.11109470297729895	
KTQQLHPVLQKPSVFGNDS(ph)DDDDETSVSESLQR	ddPTM_K562_Methotrexat_30min_R1	1	KTQQLHPVLQKPSVFGNDSDDDDETSVSESLQR	33	2	Q9H0G5	Q9H0G5	NSRP1	Nuclear speckle splicing regulatory protein 1	1	KT(0.004)QQLHPVLQKPS(0.075)VFGNDS(0.468)DDDDET(0.294)S(0.129)VS(0.027)ES(0.003)LQR	40.717	0.01459	17018000.0	1913.4	1233.1	2993.3	2290.0	1380.1	1104.8	951.69	1702.4	2058.2	3069.3	True	False	1829.2892270404689	1436.848815883766	2365.0472358647908	2089.239255454368	1561.6073402949658	1318.2869640120477	1165.1307083932427	1642.5256270704942	1962.514731240245	2513.4200278749026	0.727808805035716	0.571670791172386	0.9409677688708635	0.8312336307834789	0.6213077491927623	0.524499267687725	0.46356386734865046	0.6535022434985728	0.7808144717059297	1.0	11.295436070682127	-10.078750635134417	3.199757832391342	0.9995369997746176	0.6659645293748966	0.36693148670276643	0.13379956198860937	0.41244111855414634	9.951611811740992	0.1439140945492134	0.03827451831274355	8.341600083219779e-11	10.078750635134417	-0.33357247039972104	
KTS(ph)SDDES(ph)EEDEDDLLQR	ddPTM_K562_Methotrexat_30min_R1	1	KTSSDDESEEDEDDLLQR	18	1	Q9Y5J1	Q9Y5J1	UTP18	U3 small nucleolar RNA-associated protein 18 homolog	2	KT(0.427)S(0.553)S(0.02)DDES(1)EEDEDDLLQR	103.28	0.0013782	58763000.0	7862.2	4867.8	10597.0	7571.0	5574.1	5224.0	4560.5	6608.0	6593.6	9691.3	True	False	7516.587101932463	5672.1212115473145	8372.834516573406	6907.262184735811	6307.191852429655	6233.464065893321	5583.308215519111	6375.592894549949	6287.064975175235	7936.111659382932	0.9471372662764314	0.7147229594282632	1.0550298276958003	0.8703584930750434	0.7947458557960949	0.7854556908260538	0.7035319631519951	0.8033648174559177	0.7922097426315802	1.0	12.954216608938383	-7.687849506290281	4.833827441936351	0.7964460725010414	0.8975993361121545	0.1231477859452832	0.10542835056932445	0.37643472953757423	16.268218493007467	0.030582924744772724	0.0393471123037033	2.051873080088158e-08	7.687849506290281	0.1011532636111131	
KTS(ph)SVSSISQVSPER	ddPTM_K562_Methotrexat_30min_R1	2	KTSSVSSISQVSPER	15	1	P42356	P42356	PI4KA	Phosphatidylinositol 4-kinase alpha	1	KTS(0.992)S(0.007)VS(0.001)SISQVSPER;KT(0.26)S(0.676)S(0.045)VS(0.006)S(0.01)IS(0.003)QVSPER	136.66	1.0925999999999998e-05	36617000.0	6203.7	4750.5	8080.3	7042.0	4378.3	4280.1	4405.0	4940.8	6034.1	7253.5	True	False	5930.992776100636	5535.439380306404	6384.355453832988	6424.638793410331	4954.123192532028	5107.168749699461	5392.933382164609	4767.029263527901	5753.576008054004	5939.820862147922	0.9985137454054307	0.9319202563130351	1.074839730355827	1.081621641883505	0.8340526267555733	0.8598186491187612	0.9079286239980054	0.8025543823899223	0.9686447018493806	1.0	12.536203706397231	-7.764571790821456	24.99999685128024	0.8844649267611341	1.019103296183191	0.44959785842615474	0.06773717418200764	70.94596032812852	566224.746172418	0.020521721458512922	0.0242602170893173	1.7196030596608795e-08	7.764571790821456	0.13463836942205687	
KTSAVS(ph)SPLLDQQR	ddPTM_K562_Methotrexat_30min_R1	2	KTSAVSSPLLDQQR	14	1	Q5T200-2;Q5T200;A0A087WX14	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	1	KTS(0.001)AVS(0.499)S(0.499)PLLDQQR;KTSAVS(0.73)S(0.27)PLLDQQR	202.01	1.1315e-12	43062000.0	4313.8	3481.1	5775.5	5227.1	3553.2999999999997	3019.5	3121.8	4156.1	3847.0	5522.299999999999	True	False	4124.170517198274	4056.2926064171374	4563.301476877394	4768.8482585962975	4020.621231990512	3602.9756406900588	3821.943117466851	4009.9276073000938	3668.1538096789523	4522.157957818909	0.9119916985799873	0.8969816278539584	1.009098204760262	1.0545514559815088	0.8890934968423141	0.7967381224400699	0.8451591371014868	0.8867287796453112	0.8111511901826947	1.0	12.142795670599822	-7.9840295669568135	24.54556383329175	0.8576139512167683	0.9667246506918766	0.33339300036557107	0.06671588139468282	210.23635502480874	323118.1598071631	0.02080850315946555	0.02358716271111783	1.0374577828375615e-08	7.9840295669568135	0.10911069947510832	
KTSAVSS(ph)PLLDQQR	ddPTM_K562_Methotrexat_30min_R1	1	KTSAVSSPLLDQQR	14	1	Q5T200-2;Q5T200;A0A087WX14	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	1	KTSAVS(0.217)S(0.783)PLLDQQR	146.67	1.3616e-08	10817000.0	2501.6	2209.7	3296.6	2572.4	2294.9	2451.1	2109.8	2292.9	2577.5	2625.8	True	False	2391.6326593312624	2574.8153665220634	2604.6887107045286	2346.881685908653	2596.719574844517	2924.740385128466	2582.976356342994	2212.2574073719097	2457.672587587081	2150.242175477771	1.1122619984885451	1.1974536616788083	1.2113466754626288	1.0914499365110768	1.2076405181046834	1.3601911535748787	1.201249043386972	1.0288410452559182	1.1429747847081462	1.0	11.070283440144237	-9.25202909248549	24.16914753621422	1.0644309360903934	1.2004946591201087	0.4185797755765407	0.07546157666205995	437.27864026105823	1123099.8116928237	0.03786319751649358	0.02145823504416231	5.597201057516698e-10	9.25202909248549	0.13606372302971526	
KTSEGVT(ph)NEK	ddPTM_K562_Methotrexat_30min_R1	1	KTSEGVTNEK	10	1	Q13451	Q13451	FKBP5	Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed	1	KTSEGVT(1)NEK	82.831	0.023661	26223000.0	3968.7	3874.4	3807.3	4625.6	3820.7	4508.2	4806.0	3986.2	4066.8	4226.0	True	False	3794.240699987203	4514.578746460187	3008.199759832968	4220.080829707299	4323.189018958753	5379.345846451042	5883.86783988266	3846.0030866003335	3877.7353556543712	3460.6304492227355	1.096401582214419	1.3045538414753792	0.8692635067430028	1.219454342677687	1.249248968473288	1.5544409972059439	1.700230037912366	1.1113590841414904	1.1205285893861676	1.0	11.756819173134696	-7.690946123878472	3.1212152523452965	1.3318947564882044	1.105629905662749	0.11837312676839484	0.22195829009253992	0.4779385687018507	9.392930686115776	0.07306400662138819	0.09488499490746208	2.0372947973205065e-08	7.690946123878472	-0.22626485082545544	
KTSFDQDS(ph)DVDIFPSDFPTEPPSLPR	ddPTM_K562_Methotrexat_30min_R1	4	KTSFDQDSDVDIFPSDFPTEPPSLPR	26	1	Q02880-2;Q02880	Q02880-2	TOP2B	DNA topoisomerase 2-beta	1	KT(0.009)S(0.003)FDQDS(0.987)DVDIFPSDFPTEPPSLPR;KT(0.021)S(0.021)FDQDS(0.958)DVDIFPSDFPTEPPSLPR;KT(0.048)S(0.018)FDQDS(0.933)DVDIFPSDFPTEPPSLPR;KT(0.006)S(0.002)FDQDS(0.992)DVDIFPSDFPTEPPSLPR	98.06700000000001	5.9755e-07	298683000.0	21848.4	14290.7	27872.4	23137.0	16068.500000000002	13946.5	13268.4	18881.7	20432.6	28159.2	True	False	20887.970496535476	16651.995274633144	22022.364138882775	21108.615132509916	18181.789397528926	16641.463743296546	16244.17645582585	18217.61990875057	19482.692885793127	23059.29601177302	0.9058373024862092	0.7221380594677044	0.9550319371258846	0.9154058789016292	0.7884798125773717	0.7216813442526683	0.7044524016488758	0.7900336549498079	0.8448953895143266	1.0	14.49306084848765	-7.784782653663404	24.02201438400818	0.7882397045330295	0.8694578089141055	0.0805259390236065	0.09589923303686636	299.7621736739337	308475.8362743578	0.029485896651651047	0.033458227597533335	1.6414110256735808e-08	7.784782653663404	0.08121810438107602	
KTSS(ph)DDES(ph)EEDEDDLLQR	ddPTM_K562_Methotrexat_30min_R1	1	KTSSDDESEEDEDDLLQR	18	1	Q9Y5J1	Q9Y5J1	UTP18	U3 small nucleolar RNA-associated protein 18 homolog	2	KT(0.275)S(0.331)S(0.4)DDES(0.995)EEDEDDLLQR	100.76	0.0017284000000000002	56817000.0	4286.9	2786.1	5955.8	3963.3	2433.8	2490.2	2260.2	3055.7	3591.4	5203.0	True	False	4098.453008989124	3246.4556693972577	4705.758970822681	3615.8436424202155	2753.887359473872	2971.3959067548894	2767.107384873654	2948.2292990127526	3424.4365978895203	4260.686281899169	0.9619232062216674	0.7619560452477562	1.1044603285659238	0.8486528702621307	0.6463483057115266	0.6973984260184516	0.64945109820201	0.6919611311299364	0.8037288763638103	1.0	12.056870113176448	-7.544428009462276	8.154423504394336	0.7268980362242868	0.9333133528559862	0.32352468420594904	0.12431857900158534	0.19482633725093107	59.528896599841424	0.034936017303080255	0.04575616073674804	2.85477569457325e-08	7.544428009462276	0.20641531663169932	
KTSSGLPLILHYAIFAVLTSVLTK	ddPTM_K562_Methotrexat_30min_R1	1	KTSSGLPLILHYAIFAVLTSVLTK	24	1	H7BZV8	H7BZV8	GTF3C3		0		43.497	0.023749	13926000.0	666.66	555.0	637.66	604.54	454.02	447.77	546.45	502.56	549.66	669.64	False	True	637.354424636145	646.7043166129997	503.82388013949264	551.5409168089005	513.7315880303752	534.2952153110741	669.0053227432126	484.8846799462803	524.1064265734685	548.3617070557293	1.1622883517126616	1.1793389441529256	0.9187802022949966	1.0057976509159274	0.9368480355579702	0.9743481509309226	1.2200073676465202	0.8842424146458536	0.955767734744841	1.0	9.098984018788146	-6.748939138800871	24.896739480313805	0.9895935118572615	1.1708137796152116	0.42236650135385057	0.08595281559561704	209.61988304127073	417492.45722613455	0.022244942899752235	0.057962509835565335	1.7826285641065634e-07	6.748939138800871	0.18122026775795008	
KTTHFVEGGDAGNREDQINR	ddPTM_K562_Methotrexat_30min_R1	1	KTTHFVEGGDAGNREDQINR	20	2	A8MUD9;P18124	A8MUD9	RPL7	60S ribosomal protein L7	0		46.543	0.028441	7241800.0	3182.0	2797.4	4828.3	3496.2	2785.1	2425.2	2696.2	3215.2	3475.0	4205.1	False	True	3042.123090019218	3259.622802330101	3814.9058126235177	3189.6935742006817	3151.3894670353698	2893.835576685391	3300.8914835396617	3102.119593607293	3313.4480084830666	3443.5156417478756	0.8834352465653629	0.9465973561472096	1.1078520353945975	0.9262898462054443	0.9151662994728762	0.8403724210227559	0.9585818178145925	0.9008582844806551	0.9622282438076022	1.0	11.749666514972146	-6.262599980760273	9.587601724280102	0.9476055964605921	0.8832417006967722	0.08338150386371168	0.06629477744572684	0.2167836723424631	567.6734270897545	0.01741554700678592	0.09562390722292799	5.462607784126524e-07	6.262599980760273	-0.06436389576381985	
KTVES(ph)S(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	KTVESSK	7	1	Q92968	Q92968	PEX13	Peroxisomal membrane protein PEX13	2	KTVES(1)S(1)K	57.96	0.026659	13472000.0	4036.8	2584.6	2403.9	3473.9	3612.4	2416.5	3533.8	6802.7	6322.6	7319.9	True	False	3859.3471055278396	3011.661219311638	1899.3542412372194	3169.348580577696	4087.4939178911222	2883.454424814548	4326.344605197117	6563.4451851929325	6028.663706024469	5994.195178718766	0.6438474207896512	0.5024296222458622	0.31686559823419	0.5287363000507318	0.6819087126830606	0.4810411304342736	0.7217557113517039	1.094966878705448	1.005750317812152	1.0	12.54935034528789	-9.065411444861903	3.1113798672330653	1.0376622324433808	0.5233161180537849	0.8456194312529006	0.09676230170313943	0.10042872006351815	1.8982955943741762	0.05373729068953346	0.02964215591736822	8.601784443310036e-10	9.065411444861903	-0.514346114389596	
KTVSLTPSPTTQVETPDLVDHDNTS(ph)PLFR	ddPTM_K562_Methotrexat_30min_R1	1	KTVSLTPSPTTQVETPDLVDHDNTSPLFR	29	1	Q05209-2;Q05209-3;Q05209;H3BM04	Q05209-2	PTPN12	Tyrosine-protein phosphatase non-receptor type 12	1	KTVSLTPSPTTQVETPDLVDHDNT(0.279)S(0.721)PLFR	107.17	2.0653000000000004e-11	15741000.0	1927.0	1307.7	2555.6	1977.6	1711.7	1317.6	1405.0	2170.7	2279.4	2569.6	True	False	1842.2913873246503	1523.7751979005764	2019.2144843403792	1804.2268784220776	1936.8185525562603	1572.2075523011179	1720.107015196657	2094.3552506355268	2173.431191521237	2104.220540066905	0.8755220055337325	0.7241518504767219	0.9596021167420868	0.8574324050485275	0.9204446566682968	0.7471686177206162	0.8174556718004307	0.9953116656531332	1.0328913486663958	1.0	11.039070203829707	-9.303720809989928	6.196620154118464	1.0127414725201125	0.8428449559043416	0.5602703648978412	0.06753727959390284	0.16333818661072677	17.080581923110817	0.03744740620294074	0.017988896853504334	4.969116628066933e-10	9.303720809989928	-0.16989651661577088	
KVDEGAGDSAAVASGGAQTLALAGS(ph)PAPSGHPK	ddPTM_K562_Methotrexat_30min_R1	1	KVDEGAGDSAAVASGGAQTLALAGSPAPSGHPK	33	1	Q9NZT2-2;Q9NZT2;A0A0A0MRN5	Q9NZT2-2	OGFR	Opioid growth factor receptor	1	KVDEGAGDSAAVASGGAQT(0.18)LALAGS(0.808)PAPS(0.012)GHPK	128.47	6.02e-24	8549500.0	5528.0	3976.9	9150.2	6400.8	4201.1	3486.3	3052.4	5007.5	4527.8	7729.5	True	False	5284.995739040304	4634.015129258086	7229.698064881569	5839.651801883104	4753.618286582989	4159.978134173787	3736.9784008443226	4831.383386721984	4317.303566276155	6329.612649613616	0.8349635327784112	0.732116700623215	1.1422022902654079	0.9225922856811117	0.7510125105164481	0.6572247567831387	0.5903960649270446	0.7632984282248156	0.6820802164789184	1.0	12.62790149907394	-7.822811800532595	4.855551745609318	0.7142217103827901	0.9123646652826892	0.24634340212289096	0.13980904043499087	0.25792229240167674	12.061517434682832	0.043913935342563666	0.05107383389602097	1.5037934867349636e-08	7.822811800532595	0.19814295489989908	
KVEEEGS(ph)PGDPDHEASTQGR	ddPTM_K562_Methotrexat_30min_R1	4	KVEEEGSPGDPDHEASTQGR	20	1	Q9NZT2-2;Q9NZT2;A0A0A0MRN5	Q9NZT2-2	OGFR	Opioid growth factor receptor	1	KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(0.992)PGDPDHEAS(0.006)T(0.002)QGR;KVEEEGS(0.946)PGDPDHEAS(0.027)T(0.027)QGR;KVEEEGS(1)PGDPDHEASTQGR	156.31	1.9578e-15	133483000.0	7413.8	5412.400000000001	9240.1	7152.0	4911.2	4779.299999999999	5061.0	5976.7	6292.0	7819.400000000001	True	False	7087.89822903347	6306.707104930087	7300.7292834377595	6524.995264196347	5557.108883165449	5702.832084633217	6196.058081074936	5766.496073374188	5999.486293345458	6403.230888464801	1.1069252932612619	0.9849257686914588	1.140163366057871	1.019016083888354	0.8678601443493765	0.8906179058616599	0.9676455822070887	0.9005603848773174	0.9369467379590083	1.0	12.644584316433594	-7.576256980418093	5.832922754890493	0.9232057596363765	1.0701010146778818	0.6377110178798434	0.051274605101865024	0.11596933997460478	8.507028061960126	0.014566000523980696	0.01904252561459567	2.653035245323145e-08	7.576256980418093	0.14689525504150525	
KVEEEQEADEEDVS(ph)EEEAESK	ddPTM_K562_Methotrexat_30min_R1	1	KVEEEQEADEEDVSEEEAESK	21	1	Q9H3N1	Q9H3N1	TMX1	Thioredoxin-related transmembrane protein 1	1	KVEEEQEADEEDVS(0.962)EEEAES(0.038)K	64.27	0.009796299999999999	12321000.0	1665.8	1123.1	3299.1	1439.6	1329.4	1283.2	982.5	1472.1	1422.6	2248.8	True	False	1592.5734265726003	1308.6731855640717	2606.6639948690504	1313.3925031231909	1504.2394016289597	1531.1602391566435	1202.8506351820033	1420.3254086057773	1356.4636365087797	1841.5205286824628	0.8648143758201954	0.7106481655680358	1.4154954855344557	0.7132108942944408	0.8168463930756098	0.8314652024281965	0.6531833973323103	0.771278618122148	0.7365997909777727	1.0	10.846681764692736														
KVNVTVDY(ph)IRPASPATETVPAFSER	ddPTM_K562_Methotrexat_30min_R1	1	KVNVTVDYIRPASPATETVPAFSER	25	2	Q7KZF4	Q7KZF4	SND1	Staphylococcal nuclease domain-containing protein 1	1	KVNVT(0.015)VDY(0.968)IRPAS(0.015)PAT(0.001)ETVPAFSER	55.228	0.012043	46382000.0	1414.6	1047.0	1682.0	1681.2	1037.0	1058.1	1111.0	1496.2	1476.3	2152.3	True	False	1352.4158777942134	1219.9989540429024	1328.9711858900134	1533.811806231389	1173.3836764624884	1262.5628499467298	1360.1700312337978	1443.5777979457662	1407.6671352297983	1762.4976137865815	0.7673291964853551	0.6921989252636971	0.7540272256226367	0.8702490115354654	0.6657505050129231	0.7163486861319586	0.7717287221238184	0.8190523417755771	0.7986774700962805	1.0	10.7834055889363	-10.505634611113647	0.7308316465932198	1.0030252248956784	0.7451052398547943	0.6585459053857502	0.05350128007571162	1.0621812723591046	0.9435378041431249	0.06152367497727009	0.020196267227309737	3.1215147317113414e-11	10.505634611113647	-0.2579199850408841	
KVQVAALQAS(ph)PPLDQDDR	ddPTM_K562_Methotrexat_30min_R1	2	KVQVAALQASPPLDQDDR	18	1	Q9UDY2-7;A0A3B3ITE1;A0A1B0GTW1;A0A2R8YDH4;Q9UDY2-3;Q9UDY2;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3IRI3;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3ISZ5;B1AN86;A0A3B3IU26;U3KQJ2	Q9UDY2-7	TJP2	Tight junction protein ZO-2	1	KVQVAALQAS(1)PPLDQDDR;KVQVAALQAS(1)PPLDQDDR	133.98	2.5374000000000005e-07	66430000.0	10741.0	7253.9	12061.3	9578.1	8583.6	7151.4	7661.9	11474.8	11148.5	13432.0	True	False	10268.83850091026	8452.48367978205	9529.797957416897	8738.402843959599	9712.493852732323	8533.306837831062	9380.276113690577	11071.224780021448	10630.208668366467	10999.334641258818	0.9335872428493588	0.7684540888570244	0.866397674789378	0.7944483124626103	0.8830073972202356	0.77580209313956	0.8528039576598474	1.0065358624959884	0.9664410634887179	1.0	13.425128636136785	-9.217728931576499	5.516982758573682	0.9901476202600837	0.8342052973228974	0.6706384662549263	0.048724789280174846	0.10468659174175149	8.157411612423079	0.022055312886032675	0.012219560969839184	6.057188211077644e-10	9.217728931576499	-0.15594232293718635	
KVQVAALQAS(ph)PPLDQDDRAFEVMDEFDGR	ddPTM_K562_Methotrexat_30min_R1	1	KVQVAALQASPPLDQDDRAFEVMDEFDGR	29	2	Q9UDY2-7;A0A3B3ITE1;A0A1B0GTW1;A0A2R8YDH4;Q9UDY2-3;Q9UDY2;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3IRI3;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3ISZ5;B1AN86;A0A3B3IU26;U3KQJ2	Q9UDY2-7	TJP2	Tight junction protein ZO-2	1	KVQVAALQAS(1)PPLDQDDRAFEVMDEFDGR	55.871	0.011366	7989100.0	1205.5	1083.2	1069.8	1460.5	1037.9	760.32	819.75	1074.0	927.87	1761.1	True	False	1152.5076634249435	1262.1803887481105	845.2635996820076	1332.4602325725346	1174.402042237624	907.2410793606447	1003.5998047739931	1036.2268112510048	884.7335262248007	1442.1477245920864	0.7991606156373002	0.8752088064384113	0.5861144356214212	0.923941569820403	0.8143424021071111	0.6290902546875072	0.695906381614174	0.7185302820098427	0.6134832868630353	1.0	10.494003237465947														
KVS(ph)NMFNLHAGGR	ddPTM_K562_Methotrexat_30min_R1	1	KVSNMFNLHAGGR	13	1	E9PAL5;A8TX70-2;A8TX70	E9PAL5	COL6A5	Collagen alpha-5(VI) chain	1	KVS(1)NMFNLHAGGR	47.99100000000001	0.033589999999999995	12435000.0	0.0	0.0	0.0	0.0	0.0	0.0	116.55	120.62	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	142.68930435670492	116.3777262319332	0.0	0.0											0.0														
KVS(ph)T(ph)T(ph)AK	ddPTM_K562_Methotrexat_30min_R1	1	KVSTTAK	7	1	O60293-2;O60293	O60293-2	ZFC3H1	Zinc finger C3H1 domain-containing protein	3	KVS(1)T(1)T(1)AK	44.309	0.032612	0.0	783.26	632.09	968.92	724.92	684.54	413.13	541.0	738.61	494.88	847.55	True	False	748.8288282490424	736.5321288070469	765.5569330752395	661.3673891109078	774.5690085685937	492.961525563267	662.3330215098874	712.6326676518663	471.8731368167195	694.0504820725816	1.0789255934422537	1.061208295119407	1.1030277376785684	0.9529096314952836	1.1160124927160437	0.7102675357146638	0.9543009314423655	1.0267735360168533	0.6798830186063792	1.0	9.438896791464476	-8.235261874884033	24.99865693351749	0.8809218108115681	1.0585220584743127	0.4094575311402957	0.11280060058217092	802.7073430731407	766560.0219751096	0.0359359629617647	0.03592464334936773	5.817523216187508e-09	8.235261874884033	0.17760024766274463	
KVS(ph)WS(ph)GRDRDDEEAAPLLR	ddPTM_K562_Methotrexat_30min_R1	1	KVSWSGRDRDDEEAAPLLR	19	3	P51798;H0Y2M6;P51798-2	P51798	CLCN7	H(+)/Cl(-) exchange transporter 7	2	KVS(1)WS(1)GRDRDDEEAAPLLR	47.548	0.032643	13654000.0	635.69	518.68	467.04	550.92	658.29	688.88	604.12	787.97	741.9	998.79	True	False	607.7458287537137	604.3830539474422	369.0146864792343	502.6216989584802	744.866673460455	821.9963104350281	739.6092882708928	760.2566484743522	707.4092309334064	817.8994525270172	0.7430568963898877	0.738945419366787	0.45117365629615075	0.6145274916196101	0.9107068982123451	1.0050089994501807	0.9042789868433879	0.9295233614907441	0.8649097743588954	1.0	9.675779687884747	-7.781557109869612	6.766599457044553	0.9352553145252764	0.6304482306747885	0.7478469408857873	0.08500555675041532	0.08390772634162656	14.914292532886924	0.027725861284320332	0.032554697002305684	1.653647315297993e-08	7.781557109869612	-0.30480708385048794	
KVTGTEGSSSTLVDYTSTSSTGGS(ph)PVR	ddPTM_K562_Methotrexat_30min_R1	2	KVTGTEGSSSTLVDYTSTSSTGGSPVR	27	1	A0A2R8Y880;Q7Z6E9-2;Q7Z6E9	A0A2R8Y880	RBBP6	E3 ubiquitin-protein ligase RBBP6	1	KVTGTEGSSSTLVDYTS(0.001)T(0.019)S(0.04)S(0.026)T(0.026)GGS(0.889)PVR;KVTGTEGSSSTLVDY(0.005)T(0.017)S(0.013)T(0.14)S(0.1)S(0.072)T(0.072)GGS(0.581)PVR	170.71	1.4503e-34	22804300.0	8624.3	7899.6	12078.7	8924.2	8255.2	6948.200000000001	7100.8	8891.7	8801.9	10489.400000000001	True	False	8245.18609844524	9204.874629758653	9543.545935201966	8141.829241714352	9340.903496560397	8290.841313675335	8693.335155522012	8578.973871136466	8392.701590177583	8589.668015635812	0.9598957821695191	1.0716216986503992	1.1110494512511782	0.9478630870126462	1.0874580344149631	0.965210913691132	1.0120688179912767	0.998754999089618	0.97706937857206	1.0	13.068386657998897	-8.281984298654072	24.98462669456624	0.9918835108932187	1.0368999179777834	0.17011108111439233	0.04956662456925114	1529.0665466638359	1859488.2539439022	0.01707954214518974	0.015076387021346855	5.224150758878342e-09	8.281984298654072	0.04501640708456467	
KVVDYSQFQES(ph)DDADEDYGR	ddPTM_K562_Methotrexat_30min_R1	8	KVVDYSQFQESDDADEDYGR	20	1	Q9H1E3	Q9H1E3	NUCKS1	Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1	1	KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR	151.06	1.0915999999999999e-13	1232093000.0	32413.000000000004	24695.8	43347.49999999999	30568.07	25494.55	22836.12	22698.769999999997	30248.019999999997	29904.06	34171.0	True	False	30988.163330230367	28776.36119317354	34249.452128636956	27888.21476309038	28847.53019166514	27248.876995487695	27789.546984580356	29184.179991859062	28513.82677771456	27982.300776239965	1.1074201359647562	1.0283772382865608	1.2239684078343724	0.9966376598585676	1.030920595927546	0.9737897256334609	0.9931115817387226	1.0429514079356772	1.018995078557869	1.0	14.772226969000165	-7.350821995786151	24.99999999571986	1.008749321030663	1.1107883708747848	0.5301018875375278	0.04803026437942315	52.898725213844905	14793.738274196283	0.01310089438208579	0.01943176738368053	4.4583894689561816e-08	7.350821995786151	0.10203904984412171	
KVVDYSQFQES(ph)DDADEDYGRDSGPPTK	ddPTM_K562_Methotrexat_30min_R1	4	KVVDYSQFQESDDADEDYGRDSGPPTK	27	2	Q9H1E3	Q9H1E3	NUCKS1	Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1	1	KVVDYSQFQES(0.998)DDADEDYGRDS(0.001)GPPTK;KVVDYSQFQES(0.999)DDADEDYGRDSGPPTK;KVVDY(0.001)S(0.002)QFQES(0.837)DDADEDY(0.048)GRDS(0.11)GPPT(0.003)K;KVVDYSQFQES(0.996)DDADEDY(0.002)GRDS(0.001)GPPTK	75.82	0.00087533	308583000.0	10693.400000000001	6800.959999999999	16065.800000000001	10936.0	6831.799999999999	6078.5599999999995	5960.17	8587.599999999999	9141.1	14034.300000000001	True	False	10223.330939915622	7924.703043445668	12693.808132147316	9977.257859235358	7730.301447306097	7253.155691496261	7296.889842537127	8285.569240501985	8716.132256214267	11492.55227485249	0.8895614042396723	0.6895511853173087	1.1045247242358307	0.8681498783405289	0.6726357437782737	0.631117920374163	0.6349233545366478	0.7209511901574824	0.758415715479192	1.0	13.488411607940314	-6.217959946409541	20.947904665751857	0.777284775314698	0.8895643533723265	0.03674326369389347	0.15124621349264653	11941.507580430653	5752249.538165158	0.0399206673211277	10.566546844775043	6.053967059804176e-07	6.217959946409541	0.11227957805762856	
KVVDYSQFQES(ph)DDADEDYGRDSGPPTKK	ddPTM_K562_Methotrexat_30min_R1	1	KVVDYSQFQESDDADEDYGRDSGPPTKK	28	3	Q9H1E3	Q9H1E3	NUCKS1	Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1	1	KVVDYSQFQES(0.995)DDADEDY(0.001)GRDS(0.002)GPPT(0.002)KK	50.236999999999995	0.0084177	33912000.0	2675.1	1721.4	4003.6	3415.5	1589.2	1378.4	1190.8	1907.3	2112.8	3829.8	True	False	2557.505807074296	2005.832091202914	3163.29907243119	3116.0684179058467	1798.2076553849436	1644.7562918122803	1457.8672125951462	1840.2191779320697	2014.5763891577042	3136.1861084792317	0.8154827929884737	0.639576868789704	1.008645202489308	0.9935853007833325	0.5733740260258064	0.5244447347577339	0.4648535393526377	0.5867697624693614	0.6423650636392215	1.0	11.614795459489335	-7.7771955334413505	24.984548521306408	0.5975744134863322	0.8585780418129239	0.3054559820771806	0.16678837699352148	261.2189310452027	414213.38300750416	0.05151917603120012	0.05861032446196948	1.6703384045414463e-08	7.7771955334413505	0.26100362832659163	
KVVGSMPTAGSAGS(ph)VPENLNLFPEPGSK	ddPTM_K562_Methotrexat_30min_R1	1	KVVGSMPTAGSAGSVPENLNLFPEPGSK	28	1	A0A087WV97;Q8WU79-3;Q8WU79-2;Q8WU79	A0A087WV97	SMAP2	Stromal membrane-associated protein 2	1	KVVGSMPT(0.001)AGS(0.025)AGS(0.974)VPENLNLFPEPGSK	70.572	9.394700000000001e-05	14801000.0	2715.4	1786.0	3400.3	2515.0	1755.5	1330.1	1378.0	2285.0	2662.2	3100.0	True	False	2596.0342673281557	2081.1061431906614	2686.62349784888	2294.5138547894035	1986.3790202795549	1587.1230003914045	1687.0515778939455	2204.6352548496707	2538.4349030744243	2538.5599603858213	1.0226405158196852	0.8197979073436445	1.0583257987889148	0.9038643524656685	0.7824826087533723	0.6252060322223733	0.6645703092384472	0.8684590040231316	0.9999507369085826	1.0	11.309794621361355	-7.62404462394935	4.572938043708905	0.799617309705509	0.9563269469692005	0.18500784441788543	0.12950943391049666	0.3351333319247274	12.104117197320056	0.04073530573306657	0.05325760472060284	2.3765960777847762e-08	7.62404462394935	0.15670963726369147	
KWDGS(ph)EEDEDNSK	ddPTM_K562_Methotrexat_30min_R1	2	KWDGSEEDEDNSK	13	1	A0A087WUT6;O60841	A0A087WUT6	EIF5B	Eukaryotic translation initiation factor 5B	1	KWDGS(1)EEDEDNSK;KWDGS(0.999)EEDEDNS(0.001)K	132.51	0.00020397	41508000.0	6428.5	3793.9	11917.400000000001	7396.7	4049.8	3900.7999999999997	3829.3999999999996	5574.8	5763.6	10102.3	True	False	6145.910837268557	4420.7774897262325	9416.100600907052	6748.242795117603	4582.419684607316	4654.5743928477505	4688.240429889024	5378.731124173279	5495.651494012376	8272.675576711506	0.7429169414753762	0.5343830359033066	1.1382170754301562	0.8157267540038257	0.5539223244179106	0.562644376621137	0.5667139230126391	0.6501803526920601	0.6643136725297485	1.0	13.014138290838819	-3.1924214840452265	15.896560314670104	0.7085789780986465	0.790466444137783	0.0	0.1957626556801487	0.0	0.0	0.045989528007409415	0.0	0.0006420642896048888	3.1924214840452265	0.08188746603913655	
KWPQGAVPQLPPSAPAT(ph)SEMTTTPERPR	ddPTM_K562_Methotrexat_30min_R1	2	KWPQGAVPQLPPSAPATSEMTTTPERPR	28	2	P27708;F8VPD4;H7BZB3	P27708	CAD	CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase	1	KWPQGAVPQLPPS(0.004)APAT(0.233)S(0.233)EMT(0.177)T(0.177)T(0.177)PERPR;KWPQGAVPQLPPS(0.036)APAT(0.193)S(0.193)EMT(0.193)T(0.193)T(0.193)PERPR	96.90299999999999	3.6975e-08	75662000.0	9726.8	6137.5	10620.6	9544.3	6885.1	6966.2	7048.8	11309.0	10986.0	13816.9	True	False	9299.22151854146	7151.61755533745	8391.48119908649	8707.566037481713	7790.611331544728	8312.319558925352	8629.6728318279	10911.256059997777	10475.263257897832	11314.525521501564	0.8218834719025274	0.6320740133332917	0.7416555986496944	0.7695917978119617	0.6885495389744657	0.7346591373300658	0.7627074432267175	0.9643582525190797	0.9258243518909529	1.0	13.465888465512677	-9.212275839723384	3.6476712115666143	0.9624780068624654	0.7283515245116406	0.8163752192356105	0.0495602536656011	0.0917041917831138	2.51163246678093	0.02564887973289376	0.013181376797597762	6.133723014149106e-10	9.212275839723384	-0.23412648235082478	
KWT(ph)IMAVMVS(ph)LLTDYS(ph)PQLQK	ddPTM_K562_Methotrexat_30min_R1	1	KWTIMAVMVSLLTDYSPQLQK	21	1	P00480	P00480	OTC	Ornithine carbamoyltransferase, mitochondrial	3	KWT(0.951)IMAVMVS(0.803)LLT(0.251)DY(0.359)S(0.636)PQLQK	49.141000000000005	0.023906999999999998	34665000.0	1422.5	964.46	2483.2	1273.8	777.2	760.55	750.08	1109.8	1255.5	1648.5	True	False	1359.9686032534057	1123.8206219830156	1962.0102549358396	1162.1279317020847	879.4154227065059	907.5155236055059	918.3045337784403	1070.767704959372	1197.1320790361117	1349.9406757083957	1.0074284209117172	0.8324963031381204	1.4534047978858433	0.8608733351132232	0.6514474587892711	0.6722632630721179	0.6802554736685374	0.7931961190794368	0.8868034726103086	1.0	10.398680292870143	-7.509000446033922	24.918852533366163	0.759542384598051	1.0855635988278525	0.39341277690856113	0.17498334359570927	600.4653803598636	1078152.166932026	0.04954294335444631	0.07017535564150491	3.0974161180723874e-08	7.509000446033922	0.32602121422980146	
KY(ph)GY(ph)LNEQVPK	ddPTM_K562_Methotrexat_30min_R1	1	KYGYLNEQVPK	11	1	A0A087X1Y9	A0A087X1Y9	MMP28		2	KY(1)GY(1)LNEQVPK	42.21	0.030917	5011400.0	1985.8	1652.3	2266.4	2538.1	1556.8	2033.8	1685.5	1440.7	1769.1	1676.9	True	False	1898.5066097297815	1925.3144907020874	1790.713612188542	2315.588713654467	1761.5464874800398	2426.803066082279	2063.51628050816	1390.0297644034672	1686.8549271388185	1373.1971605067681	1.3825448117218302	1.4020670491275735	1.3040469815184386	1.6862754892384983	1.2828066778334688	1.7672648443189947	1.5027093995349035	1.0122579658484636	1.2284142260506112	1.0	10.423323063872225	-9.256618825810136	24.880539091697155	1.0902520618382259	1.4779079649693616	0.5728962880705348	0.1562737946194906	269.2599723371448	1389752.5196375372	0.07516374598767794	0.041576217435001464	5.538359900580139e-10	9.256618825810136	0.38765590313113574	
KY(ph)IGPCGGR	ddPTM_K562_Methotrexat_30min_R1	2	KYIGPCGGR	9	1	A0A2R8Y548;P53420	A0A2R8Y548	COL4A4	Collagen alpha-4(IV) chain	1	KY(1)IGPCGGR;KY(1)IGPCGGR	60.43600000000001	0.027917	24146000.0	6025.8	5446.6	7564.2	7305.0	4924.1	4989.0	5605.7	6112.4	6880.6	7878.700000000001	True	False	5760.913047089191	6346.558073629484	5976.577790909178	6664.581991744172	5571.705459275735	5953.053641795896	6862.920921770751	5897.423427458695	6560.722407818301	6451.791083836057	0.8929168617257693	0.9836893338858698	0.926343973828066	1.0329816798379026	0.8635904955501059	0.9226978314146487	1.0637233649683289	0.9140753863270245	1.0168838889180951	1.0	12.655484007843569	-8.665586973709273	20.39618255045577	0.9918288285298988	0.9396919471728375	0.22279197254084115	0.05567421084313821	7.206632952511195	1520.7344251356797	0.020638092420622364	0.01598614277189877	2.159797460991438e-09	8.665586973709273	-0.05213688135706129	
KY(ph)KVPDY(ph)WY(ph)PQDLQAR	ddPTM_K562_Methotrexat_30min_R1	1	KYKVPDYWYPQDLQAR	16	2	P30711	P30711	GSTT1	Glutathione S-transferase theta-1	3	KY(1)KVPDY(1)WY(1)PQDLQAR	45.083999999999996	0.032173	3583900.0	653.61	1027.6	680.47	717.94	776.8	707.49	719.14	766.61	866.2	928.85	True	False	624.878087010516	1197.39343378652	537.6486461727573	654.9993148737589	878.9628156953336	844.2024295518504	880.4254511804444	739.6478917813154	825.9305510641822	760.6262642594745	0.8215310414226633	1.5742204681194785	0.7068499622428863	0.8611316038520558	1.1555777876682556	1.1098780954845722	1.1575007234829093	0.9724196054437022	1.0858559451247534	1.0	9.571043945549302	-5.996624005113395	24.015466813225512	1.065570939947731	0.5274032548040816	0.10676521661826066	0.21473336186722775	31378.729905559456	206943.42944369343	0.05076501533919144	510835.50307366764	1.0078038077129913e-06	5.996624005113395	-0.5381676851436495	
KY(ph)KVPDYWY(ph)PQDLQAR	ddPTM_K562_Methotrexat_30min_R1	1	KYKVPDYWYPQDLQAR	16	2	P30711	P30711	GSTT1	Glutathione S-transferase theta-1	2	KY(1)KVPDY(0.364)WY(0.636)PQDLQAR	82.925	0.0077625	25417000.0	1702.0	1351.7	1462.6	1440.1	1672.1	1569.8	1560.8	1731.2	1615.5	1521.3	True	False	1627.1821179172575	1575.0454500284538	1155.6202476116136	1313.8486688994913	1892.0104584502667	1873.141632970776	1910.8491311878583	1670.3127147464982	1540.395757612775	1245.7778283015969	1.3061575514918575	1.2643068565249365	0.9276294868621177	1.0546412362232336	1.5187382657385198	1.5035920454006486	1.533860282128292	1.3407789710173934	1.2364931552143923	1.0	10.282831086100185	-7.754263101493204	24.999727537875412	1.3889309777381518	1.1321529606854035	0.24790963246245457	0.17983467088839164	209.58337246828174	730113.9054120047	0.05476406579347471	0.06921188751704409	1.7609089406679908e-08	7.754263101493204	-0.2567780170527483	
KY(ph)Y(ph)AEVETR	ddPTM_K562_Methotrexat_30min_R1	1	KYYAEVETR	9	1	Q96KP1	Q96KP1	EXOC2	Exocyst complex component 2	2	KY(1)Y(1)AEVETR	57.532	0.028317000000000002	10031000.0	0.0	61.103	52.2	144.16	54.049	0.0	0.0	0.0	0.0	0.0	True	False	0.0	71.19923217658398	41.24393335520733	131.52171662283905	61.15739086704052	0.0	0.0	0.0	0.0	0.0											0.0														
KYS(ph)SCSTIFLDDSTVSQPNLK	ddPTM_K562_Methotrexat_30min_R1	1	KYSSCSTIFLDDSTVSQPNLK	21	1	Q8ND76-3;Q8ND76-2;Q8ND76;R4GNF3	Q8ND76-3	CCNY	Cyclin-Y	1	KY(0.001)S(0.363)S(0.363)CS(0.136)T(0.136)IFLDDSTVSQPNLK	69.528	0.0061938	8853100.0	1467.9	900.91	1885.0	1225.0	969.37	796.38	990.62	1010.2	958.13	1341.8	True	False	1403.3728736138312	1049.770064648319	1489.364260049154	1117.606151935196	1096.8591460486425	950.2691640115086	1212.79175188193	974.6706934131894	913.5867454296057	1098.787017692159	1.2772019062997395	0.9553899415859564	1.3554621924614154	1.0171271902015768	0.9982454546582051	0.8648347211158443	1.1037550793321358	0.8870424183390355	0.8314502544346225	1.0	10.10169605466448	-7.482124017977496	8.888399420856963	0.9510539052779664	1.1746713534788855	0.45718158396366104	0.12044300521985615	0.3795550058011183	79.04074490574813	0.032827295800650115	0.0481984603533588	3.29515601624383e-08	7.482124017977496	0.2236174482009191	
KYTELPHGAISEDQAVGPADIPCDS(ph)TGQTST	ddPTM_K562_Methotrexat_30min_R1	1	KYTELPHGAISEDQAVGPADIPCDSTGQTST	31	1	Q9H773;H3BPN2;H3BSA6	Q9H773	DCTPP1	dCTP pyrophosphatase 1	1	KYTELPHGAIS(0.002)EDQAVGPADIPCDS(0.247)T(0.247)GQT(0.184)S(0.168)T(0.153)	43.732	0.022184	19358000.0	1617.8	1337.3	2100.3	1685.0	1557.6	1252.9	1315.1	1573.2	1829.9	2165.6	True	False	1546.6834490990245	1558.2660947866018	1659.4757322977396	1537.2786661312693	1762.4517015023825	1495.0051929857855	1610.0446517331845	1517.8696643017508	1744.8283484095434	1773.388854906947	0.8721626082285162	0.8786939708541063	0.935765287858886	0.8668593252278747	0.9938326253859657	0.8430216468594144	0.9078914910727047	0.8559147420498457	0.9838949554586537	1.0	10.792293198527357	-9.856613324130047	6.450875903720216	0.9977018281425972	0.896428916851254	0.46609371072673966	0.041845042196466155	0.18505514991010932	10.108634944001597	0.038110303946469436	0.009904979866150633	1.3911907323213907e-10	9.856613324130047	-0.10127291129134319	
KYTELPHGAISEDQAVGPADIPCDSTGQT(ph)ST	ddPTM_K562_Methotrexat_30min_R1	1	KYTELPHGAISEDQAVGPADIPCDSTGQTST	31	1	Q9H773;H3BPN2;H3BSA6	Q9H773	DCTPP1	dCTP pyrophosphatase 1	1	KYTELPHGAISEDQAVGPADIPCDS(0.058)T(0.058)GQT(0.294)S(0.294)T(0.294)	55.783	0.0020253	22816000.0	2283.7	1519.0	2560.9	2721.8	2195.7	1631.0	1695.5	2299.2	2323.2	3234.5	True	False	2183.311282425171	1769.988931414679	2023.402086769165	2483.184019867116	2484.473036073948	1946.1676668208263	2075.7590350647192	2218.3358328010345	2215.1949390813998	2648.700707054172	0.8242952012699852	0.6682479929501821	0.7639225078848373	0.9375102340758084	0.9379968938948657	0.7347631469413213	0.7836895386241406	0.837518496103782	0.8363326717819666	1.0	11.37106911861386	-15.999999999995056	0.19043909498514303	1.796871949658967	0.779396111312121	0.34608528238564107	0.07837511044136591	176.5441736638219	1.7274603666759403	53.44770710922549	0.23575655205166682	1.0000000000113831e-16	15.999999999995056	-1.0174758383468459	
LAAAEETAVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	LAAAEETAVSPR	12	0	Q9BUH6	Q9BUH6	C9orf142	Protein PAXX	1	LAAAEETAVS(1)PR;LAAAEET(0.001)AVS(0.999)PR	124.48	0.00074901	135622000.0	2093.8900000000003	1965.25	2730.0	2827.0	1949.26	1944.85	2447.8	2430.7	2390.5	2561.7	True	False	2001.8451027530932	2289.9741589616165	2157.0103076573937	2579.1612992006526	2205.6218564911005	2320.664737471787	2996.781460354718	2345.2109032661238	2279.366176770871	2097.75130661947	0.9542814233680874	1.091632812591076	1.028248820940276	1.229488591456046	1.0514219915064498	1.1062630399270454	1.4285685109089679	1.1179642200034832	1.0865759776091253	1.0	11.034627937804352	-6.038606712104362	0.7705619202908287	1.1592319701648057	0.7888831772277494	0.17861866237196367	0.1157749944134556	5.892638670243924	2.1312414185880204	0.04545327728666707	2.030980796304881	9.149414180173306e-07	6.038606712104362	-0.37034879293705636	
LAALMS(ph)SPQSR	ddPTM_K562_Methotrexat_30min_R1	2	LAALMSSPQSR	11	0	Q5W0Q7-2;Q5W0Q7	Q5W0Q7-2	USPL1	SUMO-specific isopeptidase USPL1	1	LAALMS(0.665)S(0.335)PQSR;LAALMS(0.5)S(0.5)PQSR	96.171	0.0085304	21544200.0	5851.6	5479.2	6716.0	6734.4	5664.200000000001	4947.6	5289.7	5755.5	5712.8	6532.6	True	False	5594.370670508	6384.544669524232	5306.403379570352	6144.00560783052	6409.141581696073	5903.653677720859	6476.049877783455	5553.075802751545	5447.213174924333	5349.482837811746	1.0457778518262202	1.193488204952516	0.9919469863634488	1.1485232861021346	1.1980862030988009	1.1035933484994227	1.2105936357078848	1.0380584387523861	1.0182691187308424	1.0	12.385183710122003	-9.451361198363267	8.190397921349213	1.0152780279990823	1.1273693390805353	0.37258419646004515	0.06523360239469132	0.3359287249632394	35.51956212607091	0.03515591803968265	0.016719471848725232	3.5370304744405303e-10	9.451361198363267	0.11209131108145298	
LAAPSVSHVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	5	LAAPSVSHVSPR	12	0	A0A0U1RRM7;A0A0U1RQW3;A0A0U1RQJ8;Q8WXE1-5;Q8WXE1-3;Q8WXE1-2;Q8WXE1	A0A0U1RRM7	ATRIP	ATR-interacting protein	1	LAAPSVSHVS(1)PR;LAAPSVS(0.005)HVS(0.995)PR;LAAPSVS(0.004)HVS(0.996)PR;LAAPSVS(0.014)HVS(0.986)PR;LAAPSVSHVS(1)PR	148.13	5.696899999999999e-09	484078000.0	18830.9	15689.1	20989.300000000003	20362.300000000003	16293.6	15966.400000000001	15326.199999999999	19004.1	18787.5	20838.1	True	False	18003.116183483013	18281.45710589731	16583.932765755813	18577.168773510246	18436.493993065775	19051.68083110243	18763.490488474727	18335.71503137358	17914.073225719603	17064.118164682495	1.0550276322361596	1.0713391063907616	0.9718599347301451	1.0886685496563955	1.0804246557096444	1.1164761429356238	1.0995874681241609	1.0745187565169878	1.0498094922242307	1.0	14.058678240671748														
LAAQLGAPTS(ph)PIPDSAIVNTR	ddPTM_K562_Methotrexat_30min_R1	1	LAAQLGAPTSPIPDSAIVNTR	21	0	B8ZZS4;Q9H8Y5	B8ZZS4	ANKZF1	Ankyrin repeat and zinc finger domain-containing protein 1	1	LAAQLGAPT(0.025)S(0.974)PIPDS(0.001)AIVNTR	100.73	9.593299999999999e-05	7072900.0	1131.5	1024.4	1196.4	1018.0	1014.2	1120.5	982.9	1377.1	1305.9	1686.9	True	False	1081.7606148198452	1193.6646881772197	945.2919897733728	928.753520546963	1147.585076825705	1337.0207668134503	1203.3403453642663	1328.6666124522892	1245.1889940368453	1381.386063604788	0.7830979646609023	0.8641065084023642	0.6843068818188245	0.6723345088072915	0.8307489897726571	0.9678834918345965	0.8711108191030221	0.9618358310240043	0.901405499044539	1.0	10.431900858574354	-8.042446653508206	4.692560299221182	0.9321364284663175	0.753386133464332	0.6880622781124262	0.0601333029478475	0.1319896584298405	6.653879978485419	0.020887781558713386	0.021654956070208665	9.068873551026786e-09	8.042446653508206	-0.17875029500198547	
LACRT(ph)PS(ph)PARPALR	ddPTM_K562_Methotrexat_30min_R1	1	LACRTPSPARPALR	14	2	Q9H211	Q9H211	CDT1	DNA replication factor Cdt1	2	LACRT(1)PS(1)PARPALR	69.045	0.034149	0.0	3431.2	3217.3	4607.2	3815.8	2535.4	2968.7	3067.5	3479.6	3452.6	3754.5	True	False	3280.3685564028756	3748.9041402504586	3640.2116811132432	3481.274738411693	2868.8495403114694	3542.359259651129	3755.464960224729	3357.220495743945	3292.0893795938505	3074.5236681511496	1.066951798219693	1.2193447001515016	1.183992082683256	1.1322972642800115	0.9331037422250967	1.1521652268760416	1.2214786306989338	1.091948170873179	1.0707640385717156	1.0	11.586147197609243	-15.999999998602094	0.17076803145204106	0.5123413756828806	1.1512270006734715	0.17720271228698115	0.08070798712203653	251.55297226201913	2.375350684356952	41.35669203351336	0.3093991286971401	1.000000003218797e-16	15.999999998602094	0.6388856249905909	
LADLVERDR	ddPTM_K562_Methotrexat_30min_R1	3	LADLVERDR	9	1	Q9UED3;H0YKL3;A0A0U1RQK9;H0YMG7;O94788-4;O94788-2;O94788-3;O94788	Q9UED3	RALDH2;ALDH1A2	Retinal dehydrogenase 2	0	;;	122.33	0.0089476	15204900.0	11861.7	9954.3	12110.400000000001	12993.2	10438.0	9005.2	10730.0	11894.3	11516.0	14097.699999999999	False	True	11340.27387079855	11599.078880830239	9568.5925384081	11854.106329244403	11810.77995652407	10745.327451413195	13136.4756391887	11475.970727246588	10980.62367358015	11544.469920493928	0.9823122195214103	1.0047303133632293	0.828846417748621	1.0268211889227417	1.02306819090562	0.930777032242764	1.1379020197253595	0.994066492985898	0.9511587581935808	1.0	13.49491431094372														
LAEDEGDS(ph)EPEAVGQSR	ddPTM_K562_Methotrexat_30min_R1	2	LAEDEGDSEPEAVGQSR	17	0	Q9UIG0-2;Q9UIG0	Q9UIG0-2	BAZ1B	Tyrosine-protein kinase BAZ1B	1	LAEDEGDS(1)EPEAVGQSR;LAEDEGDS(1)EPEAVGQSR	237.81	6.1050999999999996e-52	1008130000.0	6930.6	6062.6	8502.7	6764.7	5276.5	5900.299999999999	5739.7	6446.200000000001	7148.0	7111.1	True	False	6625.939122466126	7064.341603419769	6718.099466270524	6171.649253874307	5970.452236117953	7040.449469370281	7026.973832828647	6219.483492259056	6815.691040183299	5823.21088203213	1.1378497630767352	1.2131351150646499	1.1536761423151662	1.0598361245884644	1.0252852519114748	1.2090322009621899	1.2067180761924319	1.0680505340188948	1.1704352080419287	1.0	12.507599150206767	-13.281913277832777	2.265276678128837	0.4026092101747452	1.1372879041411683	0.29832674029601225	0.06358098246693124	4664711.179738037	352600.8408801829	14531247.37822226	0.01718287624153023	5.225005141864058e-14	13.281913277832777	0.7346786939664232	
LAEIGAPIQGNREELVER	ddPTM_K562_Methotrexat_30min_R1	1	LAEIGAPIQGNREELVER	18	1	E9PPJ0;Q13435;E9PJ04;H0YCG1;E9PJT3	E9PPJ0	SF3B2	Splicing factor 3B subunit 2	0		94.007	0.007395399999999999	9831000.0	1795.1	1504.2	2205.9	1840.9	1474.7	1382.0	1624.6	1939.8	1700.9	1860.4	False	True	1716.18955339205	1752.7434829716651	1742.9117354071234	1679.5111551816349	1668.648898437061	1649.0519408622831	1988.9579052587121	1871.576134510894	1621.8255302529067	1523.4635323554128	1.1265051751771604	1.1504991394587336	1.144045589796576	1.1024295098058292	1.0952995349072638	1.0824361107697138	1.3055500594645695	1.228500777840916	1.0645647209850946	1.0	10.573139250837004														
LAELEEFINGPNNAHIQQVGDR	ddPTM_K562_Methotrexat_30min_R1	2	LAELEEFINGPNNAHIQQVGDR	22	0	A0A087WVQ6;Q00610-2;Q00610;J3KS13	A0A087WVQ6	CLTC	Clathrin heavy chain;Clathrin heavy chain 1	0	;	125.75	7.426300000000001e-07	12204100.0	1511.69	1367.8600000000001	2061.0	1620.44	1561.75	1269.2399999999998	1340.96	1883.4899999999998	1604.57	1917.01	False	True	1445.2379176464972	1593.8756153554195	1628.424265231461	1478.378541095404	1767.1474992432902	1514.5026667294094	1641.7044150164472	1817.2465891277047	1529.9738909271011	1569.8209127932967	0.9206387211869156	1.0153232144928688	1.0373312343851295	0.9417498066482102	1.125700062243964	0.9647614287635807	1.0457908934944962	1.1576139509405219	0.9746168358814301	1.0	10.616384268644003	-4.699905220895449	0.7106611911214431	1.042221644015722	1.5625221955488968e-13	0.19386695828464573	0.0651030798292012	36.38575019642395	2.3678339975490896	0.024737732354565847	49.444839185691634	1.9956978024554694e-05	4.699905220895449	-1.0422216440155656	
LAELSDYRR	ddPTM_K562_Methotrexat_30min_R1	3	LAELSDYRR	9	1	Q96PK6	Q96PK6	RBM14	RNA-binding protein 14	0	;;	159.28	6.4428e-11	22800400.0	6749.0	6383.5	7087.6	7859.8	6992.5	6940.4	6644.299999999999	7925.799999999999	8173.0	9519.0	False	True	6452.322041024419	7438.264874052401	5600.009617784818	7170.743537126737	7912.136314044308	8281.53407406699	8134.453410015052	7647.0451216137935	7793.03901390852	7795.016859004069	0.827749594097581	0.9542333273417386	0.7184089167576609	0.9199137945216589	1.0150249136286285	1.0624138759239428	1.0435453260911036	0.9810171369649634	0.9997462680156664	1.0	12.928336427838548	-7.602615747639483	3.9355251528496225	1.0191704391742207	0.841736658413445	0.6701154324592816	0.05772394477263391	0.13163715605158946	3.961836849186989	0.017284195298241347	0.023006172850528504	2.496802855595483e-08	7.602615747639483	-0.17743378076077565	
LAFPS(ph)PFGHLSEGFSHSR	ddPTM_K562_Methotrexat_30min_R1	2	LAFPSPFGHLSEGFSHSR	18	0	Q13501;E7EMC7;Q13501-2;C9JRJ8;E9PFW8	Q13501	SQSTM1	Sequestosome-1	1	LAFPS(1)PFGHLSEGFSHSR;LAFPS(1)PFGHLSEGFSHSR	110.32	0.00051305	8597900.0	3589.5	2440.9	3452.4	3466.3999999999996	2766.4	2580.1000000000004	3019.9	3781.4	3454.1	3613.2	True	False	3431.709877945944	2844.2172367940007	2727.7884198375064	3162.506093933194	3130.230089263094	3078.6678094202434	3697.1894485355037	3648.4060186820766	3293.519644921253	2958.814467376144	1.159825976175235	0.96126920702677	0.9219193869416524	1.0688423112712715	1.0579338866214754	1.0405072177946948	1.2495509567432073	1.2330634647455465	1.1131213806190163	1.0	11.530803519758226	-8.663518139725468	7.896918507238997	1.1680065383824896	1.028170355669615	0.2747922895970528	0.08821231684904048	0.26688255321543486	18.951399135826296	0.03372108629108247	0.026033577182089294	2.1701105599301004e-09	8.663518139725468	-0.13983618271287468	
LAFVIR	ddPTM_K562_Methotrexat_30min_R1	1	LAFVIR	6	0	A8MUD9;P18124;C9JZ88;C9JIJ5	A8MUD9	RPL7	60S ribosomal protein L7	0		96.041	0.00077022	0.0	1717.2	1332.5	1988.4	2063.0	1529.7	1450.7	1632.1	1794.2	1914.1	2076.8	False	True	1641.7139441172228	1552.6729763726519	1571.0620130937602	1882.13999301413	1730.8823624731617	1731.0272435665067	1998.1399711761305	1731.0969690377597	1825.1139087877525	1700.6713953965407	0.9653328377022705	0.912976475394072	0.9237892854236196	1.1067040923418816	1.0177641413611105	1.01784933188865	1.1749124355150513	1.01789033067974	1.073172579798813	1.0	10.731888694311532	-7.250816790956718	24.90717657921476	1.060553957261746	0.9319272141394611	0.5542852565082033	0.051039045384839554	490.1975335028331	1149381.863252035	0.013618094013264833	0.023287271828383416	5.6128470652587305e-08	7.250816790956718	-0.12862674312228484	
LAGLEY(ph)VLHFT(ph)ALNGKIYFRS(ph)YK	ddPTM_K562_Methotrexat_30min_R1	1	LAGLEYVLHFTALNGKIYFRSYK	23	2	Q5VXN0;Q9H7B2	Q5VXN0	RPF2	Ribosome production factor 2 homolog	3	LAGLEY(0.983)VLHFT(0.879)ALNGKIY(0.142)FRS(0.498)Y(0.498)K	45.369	0.024321000000000002	23139000.0	1381.3	1206.0	1142.4	1238.7	1367.9	1114.4	1357.3	1900.6	1845.5	1496.6	True	False	1320.5797059219196	1405.2710015050038	902.6258518197096	1130.1050942058184	1547.802826454231	1329.7420281453885	1661.709075961867	1833.7548207296659	1759.7031078145333	1225.5512376494896	1.0775393678804381	1.1466440229787556	0.7365060097779956	0.9221198261553476	1.262944199234619	1.0850154504317	1.3558870693557403	1.4962694046530953	1.4358462165886305	1.0	10.259215086090487	-8.290832439076544	1.3788574056722758	1.354760938954784	0.9798215780304846	0.3819546096362576	0.17782008909682281	0.40488961611873864	1.5526373139794445	0.0857995183638624	0.07562523879370064	5.118792923960011e-09	8.290832439076544	-0.37493936092429947	
LAGS(ph)PIRTSEDVSQR	ddPTM_K562_Methotrexat_30min_R1	1	LAGSPIRTSEDVSQR	15	1	A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6;F8W8U2	A0A0A0MRB5	MADD	MAP kinase-activating death domain protein	1	LAGS(0.495)PIRT(0.252)S(0.252)EDVSQR	121.13	0.0015557000000000001	10664000.0	1015.3	864.57	1037.4	1137.8	620.97	821.58	565.43	697.02	1013.9	887.51	True	False	970.6686276858933	1007.4254973227045	819.6639169098102	1038.0508405484622	702.63843931814	980.3387073615299	692.2420708915632	672.505411525303	966.7640103024406	726.773338852264	1.3355864556325001	1.3861618794570152	1.1278123083109253	1.4283006613695741	0.9667917103670335	1.348891951526045	0.952486881239709	0.9253303273168191	1.3302139176282595	1.0	9.505361686106351	-7.676200464874578	0.6908283222966044	1.060719149963751	1.360982561577385	0.26357587695474394	0.16654591765130095	1.1367614159924162	1.1341567513979336	0.09838394662118669	0.2011051847771462	2.1076550582815058e-08	7.676200464874578	0.300263411613634	
LAIQGPEDS(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	3	LAIQGPEDSPSR	12	0	Q15773	Q15773	MLF2	Myeloid leukemia factor 2	1	LAIQGPEDS(0.5)PS(0.5)R;LAIQGPEDS(0.5)PS(0.5)R;LAIQGPEDS(0.99)PS(0.01)R	204.17	3.5737e-11	390787000.0	9386.8	8639.800000000001	11250.2	9695.1	8473.1	7676.9	7773.699999999999	9330.6	9668.7	10719.8	True	False	8974.167511436957	10067.380098509897	8888.936763079575	8845.145635613813	9587.461165896151	9160.352275546782	9517.150109632921	9002.437509365578	9219.20424737273	8778.34034301417	1.0223079945377862	1.146843219233525	1.0125987847068858	1.0076102417984747	1.092172414290804	1.043517557716547	1.0841628072904121	1.0255284208170108	1.0502217830628318	1.0	13.09973249034155	-10.349634261785589	0.901044241650084	1.0001415321556635	1.0581339196531194	0.1407137361413172	0.04083449479420554	2.3444627533401907	3.4432955684601767	0.039278238596958975	0.013132940929361759	4.470599222120011e-11	10.349634261785589	0.057992387497455944	
LAIQGPEDSPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	3	LAIQGPEDSPSR	12	0	Q15773	Q15773	MLF2	Myeloid leukemia factor 2	1	LAIQGPEDS(0.08)PS(0.92)R;LAIQGPEDS(0.226)PS(0.774)R;LAIQGPEDS(0.226)PS(0.774)R	193.98	9.490999999999999e-07	485394000.0	7004.099999999999	6347.5	8253.3	7264.6	6192.7	6093.7	6313.099999999999	7347.8	7517.0	8198.2	True	False	6696.208150472539	7396.316485947771	6521.045118017867	6627.723797019125	7007.148595206604	7271.221282223224	7728.973379101787	7089.373709227318	7167.5363107243775	6713.426537817755	0.9974352311374494	1.1017200298957905	0.9713437811948676	0.9872341284564815	1.0437514368756802	1.083086444941838	1.151271014222514	1.0559992977195467	1.0676420260724613	1.0	12.712833591673594	-8.070054094136424	4.120026272357422	1.0795546546194466	1.017265404003757	0.23152688100602814	0.04772342573072446	0.31964491822224594	10.447437835120933	0.016195203656481572	0.01663059985089377	8.510320301552885e-09	8.070054094136424	-0.06228925061568957	
LALAGEGEACPLLGS(ph)PGAGR	ddPTM_K562_Methotrexat_30min_R1	1	LALAGEGEACPLLGSPGAGR	20	0	Q96F46-2;Q96F46	Q96F46-2	IL17RA	Interleukin-17 receptor A	1	LALAGEGEACPLLGS(1)PGAGR	61.419	0.027870999999999996	9090100.0	797.05	645.34	892.17	857.61	809.84	708.09	537.9	1080.3	1013.0	1110.7	True	False	762.012636360722	751.9714660955552	704.9157092244311	782.4246628254236	916.3481548181114	844.9183710601833	658.5377675973533	1042.3052366801307	965.9058511059985	909.5414670969452	0.8377986754060784	0.8267588595995315	0.7750231679643654	0.8602407818994221	1.0074836474942606	0.9289498078157727	0.7240327037526502	1.1459678028830704	1.0619701091682558	1.0	9.828995603364922	-9.271943271482169	24.99969204284976	1.0779767261601974	0.8568968906451923	0.6061665509476623	0.08029184932112086	520.4432396149376	1238668.5773356964	0.04562777145009079	0.02228819694618251	5.346341899513688e-10	9.271943271482169	-0.2210798355150051	
LALDGETLGEEEQEDEQPPWAS(ph)PSPTSR	ddPTM_K562_Methotrexat_30min_R1	1	LALDGETLGEEEQEDEQPPWASPSPTSR	28	0	A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160-2;Q14160;Q14160-3;H0YCG0	A0A0G2JMS7	SCRIB	Protein scribble homolog	1	LALDGETLGEEEQEDEQPPWAS(0.783)PS(0.206)PT(0.007)S(0.004)R	160.21	3.962e-36	10625000.0	549.05	596.62	698.75	742.67	526.02	455.37	434.24	684.26	577.41	801.55	True	False	524.9144194139069	695.2013141939602	552.0919239837378	677.5612741695609	595.2008500412713	543.3638077499693	531.6293738640543	660.1941879577402	550.5663351304195	656.3815278216949	0.7997093110708307	1.0591421067273097	0.8411143528306494	1.0322674320500065	0.9067909817885015	0.8278170312824118	0.8099395722307264	1.0058086036465683	0.8387901118387049	1.0	9.358390828237829	-5.0204984406035145	15.089653314813182	0.9124171830890739	0.2506072532424105	0.0	0.09653165120161991	0.0	0.0	0.020859414547872754	0.0	9.538971679396816e-06	5.0204984406035145	-0.6618099298466634	
LALDGETLGEEEQEDEQPPWASPS(ph)PTSR	ddPTM_K562_Methotrexat_30min_R1	1	LALDGETLGEEEQEDEQPPWASPSPTSR	28	0	A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160-2;Q14160;Q14160-3;H0YCG0	A0A0G2JMS7	SCRIB	Protein scribble homolog	1	LALDGETLGEEEQEDEQPPWAS(0.294)PS(0.503)PT(0.059)S(0.143)R	89.936	2.583e-05	11816000.0	456.07	273.99	590.81	519.24	404.32	469.56	305.69	506.26	461.14	582.74	True	False	436.0217088827986	319.26219046629865	466.8070548963611	473.7190353721069	457.49516689229836	560.2958244220646	374.2487640394775	488.4545488491002	439.70170205233984	477.2001391339463	0.9137082601738528	0.6690320565407133	0.9782207015772307	0.9927051493150082	0.9587071112816316	1.174131728961617	0.7842595451013246	1.0235842548905771	0.9214198949110513	1.0	8.898450653444549	-6.789480976512129	24.421084674971684	0.9797312762791063	0.7913702462228184	0.33436829632663634	0.105962591010454	150.9218129777065	131435.6577986464	0.02627333644235454	0.05471283583407912	1.6237494743470092e-07	6.789480976512129	-0.1883610300562879	
LALS(ph)PLSLGK	ddPTM_K562_Methotrexat_30min_R1	2	LALSPLSLGK	10	0	P49454	P49454	CENPF	Centromere protein F	1	LALS(0.975)PLS(0.025)LGK;LALS(0.949)PLS(0.051)LGK	109.24	0.0031745000000000002	14301900.0	8852.5	5993.1	12103.7	8484.4	6953.0	6134.799999999999	5841.700000000001	8006.0	8399.6	10059.099999999999	True	False	8463.354699684203	6983.357909717776	9563.298776847178	7740.585824880798	7867.441371691111	7320.263275544089	7151.8499293055565	7724.424442156005	8009.104429368162	8237.299515328064	1.0274428754151155	0.8477727314301321	1.160974996605584	0.9396994501021876	0.955099587801959	0.8886727090501513	0.8682274956734679	0.9377374742513981	0.9722973426503098	1.0	13.007955731974063	-7.490151583274414	24.97861502490406	0.9297972386762037	1.004751573234734	0.1525057119989166	0.07904619719987359	1186.7733669653928	905790.8145504988	0.02184389617116987	0.032371252605935534	3.234807316477042e-08	7.490151583274414	0.0749543345585304	
LAPPS(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	1	LAPPSPAR	8	0	O75145-2;O75145	O75145-2	PPFIA3	Liprin-alpha-3	1	LAPPS(1)PAR	94.309	0.017984	82922000.0	901.57	730.36	907.33	902.93	667.7	597.62	666.05	937.47	968.64	869.41	True	False	861.9380623094364	851.0395760026495	716.8938323980897	823.7715287892629	755.5142533982681	713.1016070174513	815.428667239668	904.4986487369459	923.608137823608	711.9514242448506	1.210669763353129	1.195361856190296	1.006942058102463	1.1570614240473178	1.0611879233188184	1.0016155354613143	1.1453431223971118	1.2704499463517829	1.2972909476278616	1.0	9.475635000640903	-9.007976720303503	24.30451044439427	1.2119015959059338	1.1027511509495944	0.11181579500024885	0.09996479847963924	429.0961532222323	1307423.5022263555	0.04334595186211171	0.027715196577104157	9.81800569538767e-10	9.007976720303503	-0.10915044495633941	
LAPWQAS(ph)PPHPCR	ddPTM_K562_Methotrexat_30min_R1	2	LAPWQASPPHPCR	13	0	Q8IY92-2;Q8IY92	Q8IY92-2	SLX4	Structure-specific endonuclease subunit SLX4	1	LAPWQAS(1)PPHPCR;LAPWQAS(1)PPHPCR	113.07	0.0013534	12144000.0	3573.09	3145.08	4851.03	4292.39	2640.8	3310.49	2581.7	3740.7	3258.31	3053.77	True	False	3416.0212418971646	3664.751012780565	3832.865096247345	3916.082833065401	2988.111487755198	3950.195339873503	3160.7119438670543	3609.1374607510566	3106.831879286465	2500.70266136368	1.366024555688018	1.46548850825076	1.5327152465848186	1.5659929881187424	1.1949087486177685	1.5796341567931103	1.2639295317674668	1.4432493380812121	1.2423835617435028	1.0	11.288117813001556	-10.589719570480678	0.47311860488154234	0.9658046613005228	1.4624092674029112	0.5546989119692449	0.11903947079131177	1.671487610094014	0.6508724646758905	0.2268295432343294	0.06500081724409708	2.5720560562783645e-11	10.589719570480678	0.49660460610238844	
LAREGGTDS(ph)QPEWALDR	ddPTM_K562_Methotrexat_30min_R1	1	LAREGGTDSQPEWALDR	17	1	V9GY20;Q9NXG6;Q9NXG6-3	V9GY20	P4HTM	Transmembrane prolyl 4-hydroxylase	1	LAREGGT(0.078)DS(0.922)QPEWALDR	101.2	0.0035363	213430000.0	1538.4	1212.2	1736.5	1504.2	1710.7	1330.3	1195.1	1541.4	1710.3	1638.0	True	False	1470.7737780281473	1412.4954461230236	1372.0323806765816	1372.3291214211613	1935.6870350283314	1587.3616475608503	1463.1315970544656	1487.1880883261638	1630.7885263046305	1341.3423274554755	1.0964939731814793	1.0530462039489394	1.0228801049463079	1.0231013316522022	1.4430969599686956	1.1834127761941824	1.0907965603605638	1.1087311999967655	1.2157884627395856	1.0	10.389461762840764														
LAS(ph)PELER	ddPTM_K562_Methotrexat_30min_R1	3	LASPELER	8	0	P05412;P17535	P05412	JUN;JUND	Transcription factor AP-1;Transcription factor jun-D	1	LAS(1)PELER;LAS(1)PELER;LAS(1)PELER	112.11	0.0099571	108900000.0	12975.300000000001	11349.2	14665.2	13026.2	10227.5	9663.400000000001	9727.2	11586.2	12019.2	12401.2	True	False	12404.92134818554	13224.462396584244	11587.17493181583	11884.21327048021	11572.595516894986	11530.715286055423	11908.77221225688	11178.706778879325	11460.43001541286	10155.222509915047	1.2215312206181599	1.3022326574993848	1.141006503845947	1.170256314805221	1.1395708469800723	1.1354468378016744	1.1726746706563795	1.1007840318579922	1.1285257417278127	1.0	13.309934230255314	-3.0000000000657105	0.060324498291338007	0.7825607177132566	1.9339785963762899	0.7310867261736002	0.03845327353084413	174.96374706995243	0.7900351337939562	3.0426739314250777	17.68753986784803	0.000999999999848696	3.0000000000657105	1.1514178786630334	
LAS(ph)PSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR	ddPTM_K562_Methotrexat_30min_R1	1	LASPSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR	38	0	Q13263;Q13263-2;M0R0K9	Q13263	TRIM28	Transcription intermediary factor 1-beta	1	LAS(0.88)PS(0.095)GS(0.023)T(0.001)SSGLEVVAPEGTSAPGGGPGTLDDSATICR	148.39	8.888099999999999e-44	63013000.0	536.38	500.34	778.52	544.73	443.43	422.77	530.04	630.56	500.66	576.65	True	False	512.8013774432774	583.0126806741408	615.1192911052875	496.9743666478852	501.7488174096059	504.4643191304972	648.9149625158973	608.3828473951893	477.38442587831145	472.21309714725265	1.0859533133266057	1.2346389462644172	1.3026307292647406	1.0524366428000853	1.0625474397910293	1.0682980251460232	1.3741994163993778	1.2883650433894553	1.010951260696283	1.0	8.88329424601166	-9.793271806162817	19.81453633319932	1.005467969065282	1.183398338220625	0.2994190182435077	0.1090066588944923	32.792390184544736	20404.649031947803	0.11314699738557367	0.02926102156564592	1.6096379170015452e-10	9.793271806162817	0.1779303691553431	
LAS(ph)SVLR	ddPTM_K562_Methotrexat_30min_R1	2	LASSVLR	7	0	J3QR09;J3KTE4;P84098	J3QR09	RPL19	Ribosomal protein L19;60S ribosomal protein L19	1	LAS(0.5)S(0.5)VLR;LAS(0.5)S(0.5)VLR	118.74	0.0051953	27476000.0	6923.5	5962.6	7674.0	7352.799999999999	5460.4	5285.0	5806.7	7264.5	6367.1	5973.1	True	False	6619.151229964821	6947.8183031291355	6063.332271414963	6708.191439958456	6178.538309504119	6306.251452573927	7109.000288357602	7009.0034174422035	6071.09491073742	4891.3137094775975	1.3532461058752578	1.420440134450337	1.239612225171004	1.3714498472997971	1.2631654145454514	1.2892756071553317	1.4533928328054138	1.4329490672130247	1.2411992506172387	1.0	12.256006281047814	-10.057912590890172	5.953480513107065	1.0000241937115737	1.3498391482411658	0.7128564209985897	0.06816310799930068	0.22951644264876553	22.223300868399278	0.06860144839071115	0.01780697453486315	8.751598982343196e-11	10.057912590890172	0.3498149545295921	
LASFDS(ph)SGKLVCS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LASFDSSGKLVCSR	14	1	Q8NEA9	Q8NEA9	GMCL1P1	Putative germ cell-less protein-like 1-like	2	LAS(0.112)FDS(0.883)S(0.006)GKLVCS(1)R	92.26899999999999	0.024918	0.0	392.28	422.65	780.87	737.28	400.76	653.44	767.06	686.83	510.56	799.22	True	False	375.0358409028094	492.4857286783498	616.9760582199375	672.6438071010457	453.4669644928709	779.7080320094427	939.0927310154785	662.6737996010497	486.8241770391694	654.4735133998564	0.5730344058609411	0.7524914585465604	0.9427059240562276	1.0277632223904651	0.6928729050274357	1.1913515460068331	1.434882713797054	1.0125295921581219	0.7438409149825134	1.0	9.354190997132575	-5.894535920023174	0.6709903981821007	1.05495706289908	2.2918898836090098e-08	0.3527516862028476	0.19606945956020072	5.702577322135397	1.3832460001094042	0.09177104899665467	5.120000870985885	1.2748646529173553e-06	5.894535920023174	-1.0549570399801813	
LASPSGS(ph)TSSGLEVVAPEGTSAPGGGPGTLDDSATICR	ddPTM_K562_Methotrexat_30min_R1	2	LASPSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR	38	0	Q13263;Q13263-2;M0R0K9	Q13263	TRIM28	Transcription intermediary factor 1-beta	1	LAS(0.051)PS(0.185)GS(0.604)T(0.069)S(0.069)S(0.022)GLEVVAPEGTSAPGGGPGTLDDSATICR;LAS(0.326)PS(0.056)GS(0.428)T(0.063)S(0.063)S(0.063)GLEVVAPEGTSAPGGGPGTLDDSATICR	79.991	3.4116999999999997e-09	92477000.0	1334.82	1004.41	1428.15	1318.4299999999998	1174.65	1070.51	975.98	1400.6399999999999	1346.62	1625.8600000000001	True	False	1276.1429110683384	1170.3716804491216	1128.4008318245087	1202.845288894629	1329.1370641819303	1277.370906810769	1194.8683592111265	1351.37869730969	1284.0159301247384	1331.4009990944817	0.9584962846927968	0.879052728100039	0.8475289057105723	0.9034432824616426	0.9982995844872499	0.9594186181920699	0.8974519021870839	1.0150050196963918	0.9644096188886961	1.0	10.378729440641676	-7.658918512468511	6.276443145509574	0.9685802902199894	0.8907921047864897	0.459929165345362	0.039778426285743886	0.19774354367322705	10.47998486254798	0.012031020950040262	0.015545934568517909	2.1932164142739474e-08	7.658918512468511	-0.07778818543349963	
LASQLGVY(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LASQLGVYR	9	0	P11274;P11274-2	P11274	BCR	Breakpoint cluster region protein	1	LASQLGVY(1)R	83.647	0.019803	33870000.0	1234.5	1081.2	1425.9	973.1	1063.4	1126.2	1239.9	1556.5	1583.3	1421.6	True	False	1180.2328581485629	1259.8499227422972	1126.62307607644	887.7898338352157	1203.2557391998166	1343.8222111426217	1517.979137467855	1501.7570127674007	1509.6927285845293	1164.1344644143496	1.0138286376929078	1.0822202771705585	0.9677774436849261	0.7626179457558138	1.033605460521391	1.1543530856795559	1.303955156272705	1.290020232776891	1.2968370705733057	1.0	10.185041992341072	-8.31275482471693	2.8501120396936406	1.2440968837095647	0.9617949645374856	0.5269633184581358	0.11342380804103522	0.20653914888644861	3.328624923953036	0.04365713276120134	0.03915149825541857	4.866818780568335e-09	8.31275482471693	-0.28230191917207914	
LASTAVESAGVSSAPEGTSPGDRLGNAGDVCVPQAS(ph)PRR	ddPTM_K562_Methotrexat_30min_R1	1	LASTAVESAGVSSAPEGTSPGDRLGNAGDVCVPQASPRR	39	2	Q9H0W5	Q9H0W5	CCDC8	Coiled-coil domain-containing protein 8	1	LASTAVESAGVS(0.001)S(0.001)APEGT(0.055)S(0.055)PGDRLGNAGDVCVPQAS(0.888)PRR	59.836999999999996	0.00032104	17256000.0	1409.3	1171.1	1725.5	2127.1	1417.8	1236.2	1217.7	1646.1	1626.1	1832.2	True	False	1347.3488594481732	1364.6043697035734	1363.3411303526866	1940.6204455358015	1604.2655510978934	1475.078154337159	1490.8002223522908	1588.2057299816377	1550.502965926422	1500.3708256190002	0.8980105694152674	0.9095113997171903	0.9086694482947041	1.2934272063942391	1.069246031517595	0.9831423866353798	0.993621174776735	1.0585421302939557	1.0334131665661646	1.0	10.551103400158805	-7.065107627461081	24.99974438538536	1.0615702518889742	0.9050881472152372	0.4254125624157771	0.0832148524668063	190.1549454671821	73014.33625968474	0.02356325302529523	0.04081279433463586	8.607804059552929e-08	7.065107627461081	-0.15648210467373702	
LATNT(ph)SAPDLK	ddPTM_K562_Methotrexat_30min_R1	1	LATNTSAPDLK	11	0	E7EVA0;P27816;P27816-6;P27816-2;P27816-4;H0Y2V1;H7C4C5;F8W9U4;P27816-5;B5MEG9	E7EVA0	MAP4	Microtubule-associated protein;Microtubule-associated protein 4	1	LATNT(0.5)S(0.5)APDLK	124.38	0.0047625	10197000.0	1743.7	1649.1	3023.2	1794.5	1842.8	1838.7	1329.8	1902.8	2005.9	2951.1	True	False	1667.0490358474271	1921.5857450927872	2388.671634472467	1637.1789711409879	2085.1605004677654	2194.0027522890578	1628.041500931327	1835.8774454826923	1912.6461468248015	2416.62719325632	0.6898246616190465	0.7951519168761476	0.9884319936224073	0.6774644329541566	0.8628391281396139	0.9078780369646988	0.673683349038872	0.7596858342924264	0.7914527123430976	1.0	11.238779214147765	-13.323701423649691	1.966414731325232	1.8782852749864198	0.7971873578585198	0.2846943233389082	0.09782334083483142	7012844.142160467	855883.8428636667	27328500.2467875	0.024487508924698375	4.745681375189561e-14	13.323701423649691	-1.0810979171279	
LATNTS(ph)APDLK	ddPTM_K562_Methotrexat_30min_R1	1	LATNTSAPDLK	11	0	E7EVA0;P27816;P27816-6;P27816-2;P27816-4;H0Y2V1;H7C4C5;F8W9U4;P27816-5;B5MEG9	E7EVA0	MAP4	Microtubule-associated protein;Microtubule-associated protein 4	1	LATNT(0.02)S(0.98)APDLK	188.15	9.9945e-05	58381000.0	2333.2	1784.1	3835.2	2141.6	2153.6	2526.7	1838.5	2890.1	2460.9	3848.0	True	False	2230.635321694796	2078.8922004851397	3030.2439311090266	1953.8492530485025	2436.8361481481343	3014.9490151785326	2250.830425223525	2788.453544875727	2346.493296136972	3151.089912117625	0.7078932635710619	0.6597375062167182	0.9616494659375219	0.6200550627054175	0.7733312016192229	0.9567956165212684	0.7143021900352252	0.8849171628370973	0.7446608511910279	1.0	11.621635204969797	-15.999999999982983	0.10599091198569537	1.6672342895540135	0.6546998571005039	0.2841874937958274	0.11015877441160261	232.13465502729844	1.6486220633078577	34.12945057718001	1.5188472847050405	1.0000000000391842e-16	15.999999999982983	-1.0125344324535095	
LATVHMS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LATVHMSR	8	0	K7EQQ1;O96005-3;O96005-4;O96005	K7EQQ1	CLPTM1	Cleft lip and palate transmembrane protein 1	1	LATVHMS(1)R	82.279	0.018627	35184000.0	71.872	0.0	161.7	0.0	0.0	0.0	118.76	0.0	0.0	0.0	True	False	68.71259293710288	0.0	127.76137976124566	0.0	0.0	0.0	145.39495311370462	0.0	0.0	0.0											0.0														
LAVEEFVHATS(ph)EGEAPGGCEGR	ddPTM_K562_Methotrexat_30min_R1	3	LAVEEFVHATSEGEAPGGCEGR	22	0	Q5C9Z4	Q5C9Z4	NOM1	Nucleolar MIF4G domain-containing protein 1	1	LAVEEFVHAT(0.173)S(0.827)EGEAPGGCEGR;LAVEEFVHAT(0.002)S(0.998)EGEAPGGCEGR;LAVEEFVHAT(0.024)S(0.976)EGEAPGGCEGR	159.53	2.0484e-20	18783500.0	4917.38	4007.9	5057.15	5562.57	4207.959999999999	3489.3700000000003	3373.52	3797.5	4760.25	4445.07	True	False	4701.217863104561	4670.137352348183	3995.7233250438085	5074.908124547073	4761.380496824584	4163.641368224766	4130.117735164572	3663.93977255651	4538.947016512669	3640.02474939103	1.291534587475282	1.2829960436751122	1.0977187244983118	1.3941960491878789	1.3080626711730887	1.1438497413846804	1.1346400147019697	1.0065700166377938	1.2469549876747477	1.0	11.829732544344937	-8.418162651670817	3.698109560050716	1.1010814196799263	1.2716499384980158	0.44800450030030914	0.09435611751471304	0.2424451953350048	6.020965062904931	0.03496428388882097	0.029955322994045405	3.818012521175981e-09	8.418162651670817	0.17056851881808943	
LAVLSSS(ph)LTHWK	ddPTM_K562_Methotrexat_30min_R1	2	LAVLSSSLTHWK	12	0	F5GX19;F5H3Y3;Q6IAA8	F5GX19	LAMTOR1	Ragulator complex protein LAMTOR1	1	LAVLS(0.005)S(0.03)S(0.755)LT(0.21)HWK;LAVLS(0.005)S(0.048)S(0.742)LT(0.205)HWK	102.33	0.0043277	8499200.0	5980.1	3655.8	4860.1	5827.6	3977.8	3732.5	3570.0	5930.6	6972.299999999999	10477.0	True	False	5717.221964369558	4259.858812024871	3840.031427196228	5316.703355932696	4500.950422596417	4453.752799760107	4370.663376691863	5722.01743650392	6648.159294833524	8579.513775794272	0.6663806497402902	0.4965151782894018	0.4475814746087667	0.619697513737075	0.5246160260614221	0.5191148258687642	0.5094301951030129	0.6669395942515622	0.7748876531430305	1.0	13.066680173281176	-9.917849943746948	1.413920260984727	0.9961479429898388	0.5359300685016218	0.8482246592964718	0.06149495776885198	0.13991123769275723	0.6229489819141839	0.05766574589695225	0.01746823393833368	1.208231227775628e-10	9.917849943746948	-0.46021787448821694	
LAVPTEVSTEVPEMDTS(ph)T	ddPTM_K562_Methotrexat_30min_R1	2	LAVPTEVSTEVPEMDTST	18	0	O00488	O00488	ZNF593	Zinc finger protein 593	1	LAVPTEVSTEVPEMDT(0.288)S(0.356)T(0.356);LAVPTEVSTEVPEMDT(0.269)S(0.365)T(0.365)	93.258	0.0022625	52651300.0	3519.3	2758.7799999999997	3562.6000000000004	3319.7	2887.0	2701.2	2663.6000000000004	3382.9	3536.2	3301.6	True	False	3364.5957858908346	3214.6215037578586	2814.858945809609	3028.667055166753	3266.6911031313452	3223.168670518958	3260.9801036852773	3263.921489554028	3371.8028338411004	2703.6482468418803	1.2444650630203111	1.1889939852615234	1.041133567984531	1.1202149017367646	1.2082529992380306	1.1921553309621278	1.206140668444726	1.2072286006016502	1.2471307381719086	1.0	11.400691749319428	-7.765150016760889	24.990627541110136	1.1894124810953997	1.1438964358588766	0.013270380491664846	0.07964740041818569	285.1696604933147	1920575.6731194519	0.024119722110087706	0.02842457335323026	1.7173150787992712e-08	7.765150016760889	-0.045516045236523084	
LCDDGPQLPTS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	LCDDGPQLPTSPR	13	0	H0YAZ3;H0YB51;O60504-2;O60504	H0YAZ3	SORBS3	Vinexin	1	LCDDGPQLPT(0.054)S(0.946)PR;LCDDGPQLPT(0.009)S(0.991)PR	168.0	4.1530000000000005e-52	18910000.0	4626.1	3709.8	4900.6	4104.799999999999	3875.8	3951.7	4064.7	4844.7	4629.4	5598.799999999999	True	False	4422.742183135735	4322.781394181811	3872.031030661475	3744.9385571131356	4385.535634747648	4715.310097471404	4976.312444604879	4674.3091549979	4414.180204452235	4584.803066518754	0.9646525966259065	0.942849961375572	0.8445359537768571	0.8168155758883383	0.9565374065406892	1.0284651334112251	1.08539284510281	1.01952234091204	0.9627851273891086	1.0	12.162644050966918	-8.032099233802795	4.501780387769178	1.022890235951535	0.8913663970441917	0.596598623010784	0.04906484564567599	0.15361415545605386	7.348018780838136	0.017878050674095865	0.018730091261501297	9.287541475275068e-09	8.032099233802795	-0.13152383890734332	
LCDFGSASHVADNDITPY(ph)LVSR	ddPTM_K562_Methotrexat_30min_R1	5	LCDFGSASHVADNDITPYLVSR	22	0	Q13523;H0YDJ3	Q13523	PRPF4B	Serine/threonine-protein kinase PRP4 homolog	1	LCDFGSASHVADNDIT(0.007)PY(0.99)LVS(0.002)R;LCDFGSASHVADNDIT(0.057)PY(0.94)LVS(0.002)R;LCDFGSASHVADNDIT(0.229)PY(0.74)LVS(0.03)R;LCDFGSASHVADNDIT(0.015)PY(0.978)LVS(0.006)R;LCDFGSASHVADNDIT(0.124)PY(0.876)LVSR	214.94	2.6753e-34	1933205000.0	17594.1	12171.66	14080.130000000001	16495.6	13779.679999999998	12171.68	13310.25	20971.7	20188.4	24546.100000000002	True	False	16820.684430580495	14182.819932154562	11124.90312936121	15049.456359071206	15591.949449254213	14523.684896928105	16295.41238364505	20234.11342412729	19249.84569049197	20100.56343342788	0.8368265141566708	0.7055931531037621	0.5534622532451076	0.7487081846692655	0.7756971341074103	0.7225511337047773	0.8106943090234604	1.0066440919002952	0.9576769205622794	1.0	14.294948321312837	-9.0889856076917	2.568202889159105	0.9903749545640034	0.7182452621218043	0.7426668943252768	0.06928761467477798	0.15466395194225405	1.9796950718014523	0.04146247592729886	0.021483343201662616	8.147312833726792e-10	9.0889856076917	-0.2721296924421991	
LCNLEEGS(ph)PGSGTYTR	ddPTM_K562_Methotrexat_30min_R1	2	LCNLEEGSPGSGTYTR	16	0	R4GNH9;R4GMQ7;B1AMU7;B1AMU3;B1AMU4;Q9Y3B2	R4GNH9	EXOSC1	Exosome complex component CSL4	1	LCNLEEGS(0.814)PGS(0.17)GT(0.016)YTR;LCNLEEGS(0.765)PGS(0.234)GT(0.001)YTR	147.53	1.5717999999999999e-09	17958900.0	1966.48	1913.47	2253.6000000000004	2466.4	1637.98	1856.1799999999998	1528.71	1769.33	2308.7	2499.7	True	False	1880.0358937966676	2229.6383940711285	1780.6001572661926	2250.174541333035	1853.4030803973249	2214.860514898518	1871.5621318158594	1707.1016610342087	2201.3690409165056	2046.9801074117527	0.9184436560909363	1.0892330540966189	0.8698668593890847	1.0992654658369914	0.9054328733759944	1.082013697582551	0.9143040154807877	0.8339610408782654	1.0754227815628192	1.0	10.999281366956062														
LCQES(ph)LGK	ddPTM_K562_Methotrexat_30min_R1	1	LCQESLGK	8	0	O15018-2	O15018-2			1	LCQES(1)LGK	99.44200000000001	0.018902000000000002	0.0	0.0	0.0	0.0	61.946999999999996	0.0	63.258	0.0	0.0	0.0	60.784	True	False	0.0	0.0	0.0	56.51620268892212	0.0	75.48171322363694	0.0	0.0	0.0	49.77542859099732	0.0	0.0	0.0	1.135423727906262	0.0	1.5164452694896335	0.0	0.0	0.0	1.0	5.63736183320269	-7.097911113255495	24.31137470194327	0.484905544826443	2.0668492497564512e-05	0.1726696335579695	0.5189516439199924	66.26070984890919	16441.05248720865	0.1407146248058833	0.24372505970615874	7.981580289912754e-08	7.097911113255495	-0.48488487633394545	
LCSQYGT(ph)PVFSAPGHALHPGEPALGEAEER	ddPTM_K562_Methotrexat_30min_R1	1	LCSQYGTPVFSAPGHALHPGEPALGEAEER	30	0	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	LCS(0.104)QY(0.018)GT(0.802)PVFS(0.076)APGHALHPGEPALGEAEER	51.268	0.017674000000000002	12361000.0	1071.3	884.58	888.32	1100.5	805.37	960.4	916.68	1306.9	1236.2	1215.4	True	False	1024.2069347384	1030.7418097108603	701.873771611069	1004.0208736364767	911.2902714682687	1145.9837076730357	1122.2688246907271	1260.9355862420286	1178.72933182353	995.2792825332023	1.0290648591936633	1.035630729786114	0.7052028349516606	1.0087830534169517	0.915612619956116	1.1514192325557686	1.1275918673141763	1.2669163403388377	1.1843201727493085	1.0	9.958957602857453	-8.26709163607512	20.25327773446249	1.1615784091285888	0.935138783560513	0.4763495485662631	0.10796998508429317	28.800640210555375	103196.52130625388	0.03755821516560794	0.03422467635627059	5.4064023589544524e-09	8.26709163607512	-0.22643962556807573	
LCVIY(ph)HLDNPVGKMSSSPLSK	ddPTM_K562_Methotrexat_30min_R1	1	LCVIYHLDNPVGKMSSSPLSK	21	1	Q5JRS1;Q5JRS0	Q5JRS1	UBA1		1	LCVIY(1)HLDNPVGKMSSSPLSK	59.512	0.022452	0.0	1189.8	1009.2	1307.6	1277.9	1176.0	1084.5	817.12	1189.7	1204.7	1411.2	True	False	1137.4978166262936	1175.9531465330435	1033.1526294112853	1165.8684910677441	1330.6646128446341	1294.0642763134188	1000.3799603256178	1147.85757667162	1148.6937599480716	1155.6180051924096	0.9843199149851434	1.0175967674865434	0.8940260750257747	1.0088701334085115	1.1514744551103455	1.1198027985882393	0.8656666440213999	0.993284607468973	0.9940081885075985	1.0	10.174448871869913	-7.504344575188978	24.81760061401776	1.023264027928184	0.9673600999524828	0.09112917399097453	0.0781535062441841	1898.5565272425542	2542204.0547905224	0.02423080849024553	0.03521676598436174	3.130800718465285e-08	7.504344575188978	-0.055903927975701095	
LDFLPEMMVDHCSLNSS(ph)PVSK	ddPTM_K562_Methotrexat_30min_R1	1	LDFLPEMMVDHCSLNSSPVSK	21	0	F5H3J7;F5H0D8;E9PKU1;Q92879-4;G5EA30	F5H3J7	CELF1		1	LDFLPEMMVDHCS(0.004)LNS(0.207)S(0.729)PVS(0.06)K	89.29700000000001	0.00044156	11360000.0	2677.6	1260.7	2513.4	2507.4	1595.7	1512.9	1512.4	2796.1	2644.9	3410.0	True	False	2559.8959100677125	1469.0092467639786	1985.8716876432575	2287.580134989643	1805.5625193164822	1805.2465132637835	1851.594199134109	2697.759578155433	2521.9391762983773	2792.415956424403	0.9167315865597528	0.5260710688120394	0.7111661438097858	0.8192118118100192	0.6465951160186199	0.6464819501946059	0.6630796514660426	0.9661023358460628	0.9031387929496141	1.0	11.44729814511129	-9.264123470565536	24.800836961048727	0.9509654450125467	0.6975976149590216	0.5621652285922667	0.10185363853713393	154.56733216298537	1428170.3766807655	0.05094030161472018	0.026217170443171314	5.443478719336424e-10	9.264123470565536	-0.25336783005352503	
LDGLVET(ph)PTGYIESLPR	ddPTM_K562_Methotrexat_30min_R1	4	LDGLVETPTGYIESLPR	17	0	F8VRJ2;F5H4R6;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;P55209;F8VV59;B7Z9C2;H0YIV4;F8W0J6;P55209-3;P55209-2	F8VRJ2	NAP1L1	Nucleosome assembly protein 1-like 1	1	LDGLVET(0.997)PT(0.003)GYIESLPR;LDGLVET(0.978)PT(0.021)GYIESLPR;LDGLVET(0.95)PT(0.041)GYIES(0.008)LPR;LDGLVET(0.991)PT(0.009)GYIESLPR	211.9	2.3940999999999992e-142	206382800.0	10973.2	7432.5	8546.300000000001	9911.5	7665.1	6543.5	7889.7	11804.0	11878.0	14364.3	True	False	10490.831266938683	8660.59429410112	6752.548422099778	9042.574183596491	8673.195003329432	7807.938766304163	9659.166062489014	11388.846629429107	11325.794372593342	11762.786077087105	0.8918661954903626	0.7362706621836141	0.5740602930162235	0.7687442519430535	0.7373418972758563	0.6637831135527795	0.8211631155397987	0.9682099593406361	0.962849642794662	1.0	13.521942190025134	-9.117703526148805	2.935662802294277	0.9775236971185246	0.7244103379143186	0.6778716052130684	0.07629989638402115	0.16306619154995314	2.676422942457296	0.042839567464005725	0.022460736318609294	7.62599425652297e-10	9.117703526148805	-0.25311335920420597	
LDGLVETPTGYIES(ph)LPR	ddPTM_K562_Methotrexat_30min_R1	1	LDGLVETPTGYIESLPR	17	0	F8VRJ2;F5H4R6;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;P55209;F8VV59;B7Z9C2;H0YIV4;F8W0J6;P55209-3;P55209-2	F8VRJ2	NAP1L1	Nucleosome assembly protein 1-like 1	1	LDGLVETPT(0.004)GYIES(0.995)LPR	83.792	0.012045	7637100.0	481.78	354.06	655.61	443.85	371.43	388.95	436.43	689.41	663.97	701.37	True	False	460.6015280670835	412.5623970090063	518.0064204407561	404.93835962158124	420.27955539871004	464.109082777413	534.310537111941	665.163059538692	633.1021796237418	574.3450965857431	0.8019595375762401	0.7183179580735142	0.9019079705217325	0.7050436436713421	0.7317544067096725	0.8080665884262961	0.9302952881259161	1.1581243811304842	1.102302750362607	1.0	9.165774033870811	-8.961214652485829	2.666053725458078	1.0965512427532913	0.7736819129187723	0.819959311844647	0.06488503386775353	0.10591373326448544	1.5178765410654456	0.0325556181453206	0.018958235037671696	1.0934158057950746e-09	8.961214652485829	-0.322869329834519	
LDIDS(ph)PPITAR	ddPTM_K562_Methotrexat_30min_R1	1	LDIDSPPITAR	11	0	B4DNK4;H3BTN5;P14618-2;P14618;H3BN34;H3BQZ3;H3BU13;H3BT25;H3BUW1;H3BTJ2;H3BQ34	B4DNK4	PKM	Pyruvate kinase;Pyruvate kinase PKM	1	LDIDS(0.951)PPIT(0.049)AR	99.161	0.0080872	55363000.0	3126.6	2861.5	3759.4	3295.3	2853.4	2478.9	2905.3	3403.0	3378.9	3673.4	True	False	2989.1584076851314	3334.3142378163943	2970.353315240736	3006.406165283306	3228.6721141929256	2957.912341681269	3556.887481317328	3283.31456116124	3221.8156765074627	3008.1116640262176	0.9936992843158894	1.1084409790006164	0.9874478234179166	0.9994330334331311	1.073321895860574	0.9833120149942309	1.1824319967419692	1.091486928635713	1.071042579647862	1.0	11.554642406912608	-8.733363246443188	24.999940376036943	1.0938644703027633	1.0275276889874776	0.22164941743025823	0.055964661625116666	297.60278116131786	264995.4276380525	0.02057474580060422	0.015933691084735118	1.8477225265663774e-09	8.733363246443188	-0.06633678131528575	
LDLDLTADS(ph)QPPVFK	ddPTM_K562_Methotrexat_30min_R1	2	LDLDLTADSQPPVFK	15	0	Q13263;Q13263-2;M0R0K9	Q13263	TRIM28	Transcription intermediary factor 1-beta	1	LDLDLT(0.003)ADS(0.997)QPPVFK;LDLDLT(0.029)ADS(0.971)QPPVFK	179.79	3.9711999999999995e-05	11089100.0	5864.799999999999	3465.1000000000004	3995.0	5227.6	3213.6000000000004	2677.1	3074.5	4641.2	5205.9	7209.1	True	False	5606.990414313237	4037.6488783706377	3156.5040949052336	4769.304424372598	3636.2447277529905	3194.4116866008803	3764.034888414321	4477.9663653428	4963.878845284025	5903.462132392714	0.9497800254442701	0.6839459266141088	0.534686938633056	0.8078826148817129	0.6159512242486758	0.541108186173147	0.6375978712154001	0.7585322417453788	0.8408419896600795	1.0	12.52734556732758	-9.91598642489267	1.7673720280702672	0.9952704867835864	0.6743461547983909	0.4181717299354275	0.11751910318732102	0.3251928579487242	2.244402151229108	0.11353761195552642	0.032781245992658664	1.2134267789720254e-10	9.91598642489267	-0.32092433198519554	
LDLEDS(ph)YTLR	ddPTM_K562_Methotrexat_30min_R1	1	LDLEDSYTLR	10	0	A0A2R8YH03;Q5VWN6;Q5VWN6-2	A0A2R8YH03	FAM208B	Protein FAM208B	1	LDLEDS(1)YTLR	109.72	0.0030648000000000003	3101100.0	982.29	682.6	763.67	849.78	752.78	649.78	609.23	1005.8	1132.1	1039.1	True	False	939.1097077608351	795.388047783844	603.3861031680302	775.2811067685637	851.7837646744767	775.3407888086069	745.8653358492946	970.4254439071333	1079.4689181017782	850.908920915131	1.103654791573752	0.9347510976009327	0.7091077415419546	0.9111211408322861	1.001028128555057	0.9111912799959219	0.8765513176746759	1.1404574802946774	1.268606887962623	1.0	9.732860907612942	-9.270380495928631	21.66386955951091	1.1533993797921749	0.9157467615168391	0.4366758281952119	0.11144202875740215	96.1230601641677	232893.27890272855	0.060611686550622275	0.029973175915511813	5.365614958396415e-10	9.270380495928631	-0.2376526182753358	
LDLLEDR	ddPTM_K562_Methotrexat_30min_R1	1	LDLLEDR	7	0	F5H6X6;Q14697;Q14697-2;E9PNH1;E9PKU7	F5H6X6	GANAB	Neutral alpha-glucosidase AB	0		91.041	0.022893	0.0	4198.1	3322.5	4126.5	4008.3	3272.7	3069.1	3247.2	4231.8	4102.3	5195.4	False	True	4013.5565506630064	3871.4866521562017	3260.4040419590606	3656.89856228722	3703.1174136536033	3662.160138712324	3975.467259606109	4082.9651953929247	3911.5849684029026	4254.462715544678	0.9433756549325337	0.9099825080170092	0.7663491867131446	0.8595441555818277	0.8704077720844503	0.8607808749461507	0.9344228696800672	0.9596899698932261	0.9194075092281357	1.0	12.054761234067524	-8.8426560190732	3.8945838173528644	0.9534760580735742	0.8650990893597739	0.4506546568430748	0.04626355458443286	0.2297625666163488	6.701495573311543	0.02138982167254334	0.014217734602378252	1.4366268564764136e-09	8.8426560190732	-0.0883769687138003	
LDNVPHTPSS(ph)YIETLPK	ddPTM_K562_Methotrexat_30min_R1	1	LDNVPHTPSSYIETLPK	17	0	E9PNJ7;C9J6D1;Q99733;Q99733-2;E9PS34;A8MXH2;E9PNW0;E9PJJ2;E9PKI2;E9PP22	E9PNJ7	NAP1L4	Nucleosome assembly protein 1-like 4	1	LDNVPHTPS(0.064)S(0.93)Y(0.005)IET(0.001)LPK	101.48	0.007962899999999998	0.0	1683.5	1083.7	2241.5	1560.5	1299.7	1122.4	1134.1	1741.6	1639.9	2302.1	True	False	1609.495355765982	1262.7630052495626	1771.0397819099096	1423.6933878325506	1470.6333310494651	1339.2879149231742	1388.4507942594516	1680.346940851722	1563.6614069385278	1885.1673821949028	0.8537678781032401	0.6698413186946435	0.9394602297053781	0.755207946667814	0.7801075622989004	0.7104344832042657	0.7365132705844277	0.8913515885763373	0.8294549448006865	1.0	10.880476909345283	-10.129261576723325	1.1233333892260178	0.9966505967206583	0.7800727875552171	0.41042637123170567	0.07685602830582845	0.6301682382502272	1.6916100595985397	0.07118578212935159	0.022586367290739956	7.425717502356054e-11	10.129261576723325	-0.21657780916544112	
LDQPVSAPPS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	LDQPVSAPPSPR	12	0	Q16204	Q16204	CCDC6	Coiled-coil domain-containing protein 6	1	LDQPVSAPPS(1)PR;LDQPVSAPPS(1)PR;LDQPVSAPPS(1)PR;LDQPVSAPPS(1)PR	188.12	8.498200000000001e-08	384089000.0	5299.1	4981.99	8581.1	5989.0199999999995	4919.17	4781.8	4896.55	5832.37	5774.700000000001	5931.3	True	False	5066.157908963183	5805.179168149187	6780.044377669914	5463.971915153411	5566.127077863045	5705.815174251275	5994.7259823923105	5627.242241281212	5506.235457435158	4857.084094527877	1.043045129622288	1.1951984061156073	1.3959083774786802	1.1249490041379497	1.1459812038531503	1.1747408657551557	1.2342232223539493	1.158563889725734	1.1336504269379715	1.0	12.245874749757107	-10.190759975518741	1.503259014206686	1.000397872748508	1.1914156399983131	0.29839504944018747	0.08542644502476625	0.9176773760329612	3.9740958477545685	0.08383293800898758	0.024484979163298587	6.445253813180744e-11	10.190759975518741	0.19101776724980501	
LDQVVES(ph)PAIPR	ddPTM_K562_Methotrexat_30min_R1	5	LDQVVESPAIPR	12	0	P16157-10;P16157-8;P16157-5;P16157-16;P16157-3;P16157;P16157-21;P16157-12;P16157-14;P16157-2;H0YBS0;P16157-11;P16157-9;P16157-6;P16157-7;P16157-4;P16157-13;P16157-15	P16157-10;H0YBS0	ANK1	Ankyrin-1	1	LDQVVES(1)PAIPR;LDQVVES(1)PAIPR;LDQVVES(1)PAIPR;LDQVVES(1)PAIPR;LDQVVES(1)PAIPR	133.48	8.0312e-05	344601800.0	10259.400000000001	7894.89	9571.8	9672.800000000001	7976.900000000001	7457.97	7660.699999999999	10205.000000000002	10695.900000000001	11766.3	True	False	9808.409060258698	9199.38638231496	7562.809986386464	8824.80064199083	9026.002168537727	8899.117151514236	9378.806983143788	9846.084365750941	10198.649943578139	9635.30905222183	1.0179651744535327	0.954757790586245	0.7849058027508248	0.9158814309081137	0.9367631198561709	0.9235943656070031	0.9733789474019108	1.0218753038835333	1.0584663022538345	1.0	13.234115226321343	-9.007962902860251	1.9027009127112975	1.0330426741465992	0.9162736171147335	0.41119742393380454	0.05593914753099431	0.35881992387201994	2.554236897784772	0.03626192742719157	0.01845933319550676	9.81831806844393e-10	9.007962902860251	-0.11676905703186569	
LDRETEELHHDR	ddPTM_K562_Methotrexat_30min_R1	3	LDRETEELHHDR	12	1	O60869-2;O60869-3;O60869	O60869-2	EDF1	Endothelial differentiation-related factor 1	0	;;	114.24	0.0040569000000000004	119970000.0	13567.6	11498.0	16954.8	13967.800000000001	12798.3	12352.999999999998	11137.3	14127.3	14409.5	13668.5	False	True	12971.184549385536	13397.849067416704	13396.21918105114	12743.264660408513	14481.500777695139	14740.042420746579	13635.123032277386	13630.434851570124	13739.605490140078	11193.002199526958	1.1588655410014774	1.1969844040576467	1.196838787507546	1.138502828217712	1.2937995114757648	1.316898018779048	1.2181828243412334	1.2177639750795526	1.22751744752813	1.0	13.45030942904069	-12.120861012081802	3.898108989409986	0.9999273805474177	1.2198538340007516	0.6195589607944121	0.05132415522849597	45439195.42581283	65623245.61770314	44420.663092849885	0.01396552353620833	7.57075144155698e-13	12.120861012081802	0.21992645345333395	
LDRSS(ph)PYIQVLEEDWR	ddPTM_K562_Methotrexat_30min_R1	2	LDRSSPYIQVLEEDWR	16	1	Q9H257;Q9H257-2;Q9H257-3	Q9H257	CARD9	Caspase recruitment domain-containing protein 9	1	LDRS(0.237)S(0.76)PY(0.003)IQVLEEDWR;LDRS(0.208)S(0.775)PY(0.016)IQVLEEDWR	101.05	0.0014623	9703400.0	1215.06	1318.53	1707.65	1691.1999999999998	1219.43	1179.17	1215.3600000000001	1705.45	1672.27	1674.29	True	False	1161.6474172717637	1536.3946713220519	1349.2376014180034	1542.9351217573908	1379.8064190825958	1407.0279139700276	1487.935417786056	1645.468356841738	1594.5265327038778	1371.0598567981856	0.8472623653241081	1.120589056490918	0.9840836596068508	1.1253594174659762	1.0063794168001066	1.0262337614171255	1.0852446816295884	1.200143340703136	1.1629882712980528	1.0	10.42107584135243	-8.94492006598146	3.9425835702309766	1.1376910792337738	1.026140269600116	0.21258136419883178	0.0875254402428942	0.3038842645714107	9.743209355912962	0.03762387870913507	0.023878674561572485	1.1352197391773453e-09	8.94492006598146	-0.11155080963365771	
LDS(ph)SPVSSPR	ddPTM_K562_Methotrexat_30min_R1	1	LDSSPVSSPR	10	0	O60293-2;O60293	O60293-2	ZFC3H1	Zinc finger C3H1 domain-containing protein	1	LDS(0.813)S(0.187)PVSSPR	119.03	0.0037865999999999998	68945000.0	2437.6	2095.7	3050.5	2421.1	2115.8	1883.3	2214.5	2462.7	2364.4	2844.1	True	False	2330.4460226998276	2441.9788041907445	2410.241737549041	2208.8459220002487	2394.0647855924144	2247.2210710752083	2711.157996550176	2376.085445128353	2254.4795600740626	2329.005930107519	1.0006183292939241	1.048506907012474	1.0348800346067697	0.9484071695336032	1.0279341733929772	0.9648842203555339	1.1640837670280277	1.0202144247089404	0.9680007813333409	1.0	11.185498597601084														
LDSQPQET(ph)SPELPR	ddPTM_K562_Methotrexat_30min_R1	3	LDSQPQETSPELPR	14	0	O14545	O14545	TRAFD1	TRAF-type zinc finger domain-containing protein 1	1	LDSQPQET(0.992)S(0.008)PELPR;LDSQPQET(0.963)S(0.037)PELPR;LDS(0.001)QPQET(0.5)S(0.5)PELPR	238.03	8.884399999999998e-48	639620000.0	8088.199999999999	6670.8	9095.800000000001	7846.0	6619.0	6457.1	6283.9	7823.700000000001	8067.8	9123.5	True	False	7732.652412537221	7773.036315787386	7186.715881461584	7158.15336170086	7489.514517362785	7704.843189104087	7693.224535796634	7548.53603648463	7692.729738946669	7471.145741477431	1.03500221788045	1.0404075338316523	0.9619295527275311	0.9581065086123355	1.0024586290404398	1.0312800011823142	1.0297248644322774	1.0103585578015903	1.0296586367254321	1.0	12.867113789898315	-8.121103812371608	6.252041790435417	1.021299182267266	0.9969992945914962	0.13208518969926397	0.026249008752184194	0.5092855455951658	24.04393175304004	0.009658518933864593	0.00968633070028279	7.566520057134458e-09	8.121103812371608	-0.024299887675769738	
LDSQPQETS(ph)PELPR	ddPTM_K562_Methotrexat_30min_R1	5	LDSQPQETSPELPR	14	0	O14545	O14545	TRAFD1	TRAF-type zinc finger domain-containing protein 1	1	LDS(0.006)QPQET(0.238)S(0.756)PELPR;LDSQPQET(0.226)S(0.774)PELPR;LDS(0.001)QPQET(0.203)S(0.796)PELPR;LDS(0.014)QPQET(0.233)S(0.754)PELPR;LDSQPQET(0.23)S(0.77)PELPR	191.01	1.6151e-08	3004482000.0	22584.9	20452.100000000002	27194.299999999996	25336.100000000002	20528.0	18867.9	18772.4	23652.9	23306.7	27481.8	True	False	21592.09483839569	23831.461898740043	21486.588062097966	23114.923449832917	23227.791813328782	22513.854641820173	22982.5885637564	22821.014100408644	22223.176604118646	22504.579715913253	0.9594533695347204	1.0589605404578402	0.9547651337342926	1.0271208679133021	1.0321362187850207	1.0004121350420228	1.0212405143254082	1.0140608884275957	0.9874957401850245	1.0	14.457931001485553														
LDSQPQETS(ph)PELPRR	ddPTM_K562_Methotrexat_30min_R1	2	LDSQPQETSPELPRR	15	1	O14545	O14545	TRAFD1	TRAF-type zinc finger domain-containing protein 1	1	LDS(0.001)QPQET(0.214)S(0.784)PELPRR;LDS(0.01)QPQET(0.135)S(0.855)PELPRR	138.28	8.5102e-06	25717000.0	5122.799999999999	4202.9	6256.5	6323.8	4655.1	4336.5	4546.6	5622.8	5251.4	5929.0	True	False	4897.607845867525	4897.357787914909	4943.346150131312	5769.402272332893	5267.327244262805	5174.467251482844	5566.290786685497	5425.042936966623	5007.263560215245	4855.20064681533	1.0087343865139766	1.0086828833999333	1.018154863151495	1.188293273959175	1.0848835357026492	1.0657576540893177	1.1464594754362194	1.1173674028333038	1.0313195940727304	1.0	12.245315202589557	-7.039763454799777	24.634347939392605	1.097044596884537	1.009886135536348	0.3291369669986789	0.05103737459089582	427.0406247921145	264560.5691475991	0.013351161601007515	0.023130215043717407	9.125077154551608e-08	7.039763454799777	-0.08715846134818905	
LDSS(ph)PSVSSTLAAK	ddPTM_K562_Methotrexat_30min_R1	2	LDSSPSVSSTLAAK	14	0	Q13428;Q13428-3;Q13428-4;E7ETY2;Q13428-6;Q13428-7;Q13428-2;Q13428-8;A0A6I8PRA0;A0A3B3IS06	Q13428	TCOF1	Treacle protein	1	LDS(0.191)S(0.807)PS(0.002)VSSTLAAK;LDS(0.055)S(0.939)PS(0.007)VSSTLAAK	140.31	1.3744000000000001e-05	41725000.0	6104.7	4693.1	8774.7	5843.8	5035.4	3933.0	3923.0	5826.5	6118.1	7014.4	True	False	5836.344697561383	5468.555005939585	6933.010383370454	5331.483127084818	5697.643360134246	4692.996587128337	4802.8326125384265	5621.5786925083585	5833.670866388563	5744.024189074288	1.0160724442391273	0.9520424750893853	1.206995332045735	0.9281790869240828	0.9919253771548764	0.8170224275961248	0.8361442177896634	0.9786829768581349	1.015606946343435	1.0	12.487846109272919	-7.411348342347084	21.430864998839294	0.9302299676023613	1.0510545558254982	0.28280389004737916	0.0867930303127303	10.92583737909552	2081.8202734971796	0.025251816548363084	0.03745457116925604	3.878391601043148e-08	7.411348342347084	0.12082458822313691	
LDSSEMDHS(ph)ENEDYTMSSPLPGK	ddPTM_K562_Methotrexat_30min_R1	1	LDSSEMDHSENEDYTMSSPLPGK	23	0	Q9NTI5-2;Q9NTI5;A9IYQ1	Q9NTI5-2	PDS5B	Sister chromatid cohesion protein PDS5 homolog B	1	LDS(0.05)S(0.045)EMDHS(0.835)ENEDY(0.057)T(0.012)MS(0.001)SPLPGK	63.726000000000006	0.0037789	11571000.0	2142.7	1577.0	3361.5	2455.0	1714.3	1692.5	1587.5	1824.5	2109.6	3000.5	True	False	2048.509473596538	1837.5724455832442	2655.967087615507	2239.773961633394	1939.7604981288744	2019.551671425045	1943.5372858538744	1760.3313008635566	2011.5251564592443	2457.080374560534	0.8337169165509811	0.747868268620194	1.0809443252708186	0.9115590946161023	0.7894574871104142	0.8219314648126869	0.7909945909691659	0.7164321196364625	0.8186647768162731	1.0	11.262729335721275	-7.760436919951176	24.994551106628187	0.8070899700128427	0.8965056093906045	0.08907500858398054	0.1032652264842611	54.837551021944634	1367254.6691607193	0.03153688376069629	0.038394389428146374	1.7360534014208378e-08	7.760436919951176	0.08941563937776187	
LDSSEMDHS(ph)ENEDYTMSSPLPGKK	ddPTM_K562_Methotrexat_30min_R1	1	LDSSEMDHSENEDYTMSSPLPGKK	24	1	Q9NTI5-2;Q9NTI5;A9IYQ1	Q9NTI5-2	PDS5B	Sister chromatid cohesion protein PDS5 homolog B	1	LDS(0.008)S(0.008)EMDHS(0.602)ENEDY(0.084)T(0.227)MS(0.033)S(0.037)PLPGKK	45.992	0.024175	0.0	1101.3	635.67	1224.8	998.77	518.42	588.25	634.19	811.45	764.25	885.9	True	False	1052.888170659386	740.7036629574509	967.7312178823354	911.2093847904623	586.6013168290095	701.9209871289713	776.4232512224684	782.9108435657613	728.7201843117076	725.454925453483	1.451348848450128	1.0210195519651835	1.333964639191615	1.2560523787482232	0.808597882855815	0.9675597511316081	1.0702570538577914	1.0791998456366707	1.00450098103088	1.0	9.502742168167503	-7.730177777670874	24.825226436868597	0.9953681719170507	1.2530102885656855	0.553407661038724	0.12170381391189944	151.01485613365386	119922.13205724866	0.03549727791421401	0.04582205603572367	1.861325050607558e-08	7.730177777670874	0.2576421166486348	
LDSSEMDHSENEDYT(ph)MSSPLPGK	ddPTM_K562_Methotrexat_30min_R1	1	LDSSEMDHSENEDYTMSSPLPGK	23	0	Q9NTI5-2;Q9NTI5;A9IYQ1	Q9NTI5-2	PDS5B	Sister chromatid cohesion protein PDS5 homolog B	1	LDS(0.015)S(0.014)EMDHS(0.056)ENEDY(0.413)T(0.457)MS(0.035)S(0.011)PLPGK	53.778999999999996	0.01146	12324000.0	2625.7	1945.9	3892.7	3012.4	1521.3	1850.5	1702.0	2464.2	2355.8	3181.7	True	False	2510.277371924408	2267.426900355381	3075.6754668930193	2748.307569052722	1721.3776152385574	2208.0829352862906	2083.716825526485	2377.5326892781427	2246.2793721969524	2605.4632986966344	0.9634667942473637	0.8702586221381994	1.1804716145614507	1.054824902130667	0.6606800472298593	0.8474818802440508	0.7997490605869791	0.9125182037557341	0.8621420126396094	1.0	11.347324217358517	-7.722808852753407	24.999994689793912	0.840372821374613	1.018414148045816	0.3702838956124809	0.10849321937024661	174.87700435373216	113172.06324067632	0.03252462284128983	0.041988322199357775	1.89317668445784e-08	7.722808852753407	0.17804132667120298	
LDTGS(ph)PEPETR	ddPTM_K562_Methotrexat_30min_R1	1	LDTGSPEPETR	11	0	Q9Y2F5	Q9Y2F5	ICE1	Little elongation complex subunit 1	1	LDT(0.032)GS(0.968)PEPETR	90.61399999999999	0.016443	20742000.0	1451.9	1375.8	2070.8	1973.0	1637.7	1555.0	1557.5	1812.3	1475.8	1740.5	True	False	1388.0762144559721	1603.1275653984953	1636.1673791563858	1800.0301532801159	1853.086255489506	1855.4817424318742	1906.8090221841942	1748.560381778582	1407.1903801206647	1425.2785842101687	0.9738981767028987	1.124781908013361	1.1479632103383375	1.2629321546128607	1.3001572296242778	1.3018379445167252	1.337850047919488	1.2268200765449395	0.987309004506282	1.0	10.477028219923438	-6.364961987109445	1.4388509576478332	1.2231335574871163	0.9093715972793122	0.23823934830005988	0.1162776580379975	1.2758936356320603	2.8157129096262246	0.034109552992513247	0.5455291041018234	4.3155684844591174e-07	6.364961987109445	-0.3137619602078041	
LDYWEDDLRR	ddPTM_K562_Methotrexat_30min_R1	1	LDYWEDDLRR	10	1	E9PEM5;A0A494C1L5;P50851-2;P50851;H0YAC6;A0A494BZW2;Q5T321;A0A0D9SF28;F5GXV7;Q8NFP9	E9PEM5	LRBA;NBEA	Lipopolysaccharide-responsive and beige-like anchor protein;Neurobeachin	0		88.134	0.0062729	0.0	2189.2	1927.1	2523.3	2520.4	1984.6	1860.5	1889.4	2869.5	2202.4	2677.6	False	True	2092.9653892740657	2245.5205199007405	1993.6938129347625	2299.440445173444	2245.6096859281142	2220.015293758523	2313.1460459164164	2768.5780585519155	2100.010904714563	2192.660693525507	0.954532270065395	1.0241076179872781	0.9092577884128381	1.0486987120092206	1.024148283662381	1.01247552816256	1.054949383069929	1.262656856451606	0.9577454965629106	1.0	11.098466861998922	-8.115115997301835	1.0580858484487616	1.0843961455480498	0.974622149614526	0.1580468333692001	0.08289140407102706	0.7875276625821098	1.869163665228807	0.041821648567854114	0.04366093777051642	7.671565593435638e-09	8.115115997301835	-0.10977399593352377	
LEEPPELNRQS(ph)PNPR	ddPTM_K562_Methotrexat_30min_R1	1	LEEPPELNRQSPNPR	15	1	Q7Z5L9;Q7Z5L9-2	Q7Z5L9	IRF2BP2	Interferon regulatory factor 2-binding protein 2	1	LEEPPELNRQS(1)PNPR	95.264	0.0041346	29738000.0	1618.8	1322.0	1708.5	1363.0	1274.9	1177.6	1462.8	1733.0	1708.6	1965.7	True	False	1547.6394902963893	1540.4380298421368	1349.9091980339401	1243.507906194019	1442.5716963568238	1405.1545336898873	1790.8701365335721	1672.0494077262497	1629.167558933574	1609.6926819775508	0.9614502865199539	0.956976475751674	0.8386129931183761	0.7725126169215952	0.89617832801761	0.8729334173052319	1.1125540648749424	1.0387382799504885	1.0120985062391523	1.0	10.65256956399118	-8.74777152559233	24.997079446125593	1.0440758988577332	0.8800123652820091	0.6380361005243199	0.05815510954693906	155.19945267948953	283843.8945627469	0.024342719108644176	0.01875277831680229	1.7874276606483061e-09	8.74777152559233	-0.16406353357572412	
LEESVALR	ddPTM_K562_Methotrexat_30min_R1	2	LEESVALR	8	0	E9PPC8;E9PK68;Q08209-4;Q08209-3;Q08209-2;Q08209	E9PPC8	PPP3CA	Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform	0	;	119.29	0.008803	13780700.0	6898.4	6692.4	7569.5	8068.9	6561.9	7186.2	7024.3	7322.2	7556.299999999999	8099.1	False	True	6595.154595910928	7798.205348650162	5980.76539333797	7361.512064775437	7424.904866518035	8574.831445314427	8599.678083164321	7064.674075737532	7205.009262302328	6632.27450811639	0.9944031399544703	1.1757965293968062	0.9017668653519811	1.1099528609327955	1.119511090415761	1.2928945318564227	1.2966408541504544	1.065196271217662	1.0863557070029357	1.0	12.695288005503933	-7.624515067905253	3.292560852915609	1.1624494399966978	1.0357098506922098	0.1742066900517425	0.10895861534091285	0.3991293400734515	8.564827324844778	0.03439384104398729	0.04606023380958102	2.3740230542580477e-08	7.624515067905253	-0.12673958930448803	
LEEVS(ph)FLQPY(ph)PARRR	ddPTM_K562_Methotrexat_30min_R1	1	LEEVSFLQPYPARRR	15	2	Q96S65	Q96S65	CSRNP1	Cysteine/serine-rich nuclear protein 1	2	LEEVS(1)FLQPY(1)PARRR	93.23700000000001	0.0072167	497070000.0	10147.0	7449.2	13963.0	10490.0	7096.8	7118.9	6461.5	8761.2	9513.7	11483.0	True	False	9700.950029674737	8680.05368524965	11032.357115685054	9570.357986775678	8030.153592207313	8494.526672796315	7910.655856721138	8453.063630104569	9071.410163541108	9403.317427454956	1.0316518722797532	0.9230841936598262	1.173240954673483	1.0177640030350366	0.8539702774216252	0.9033542404933352	0.8412622372636618	0.8989448346627199	0.9647031734837775	1.0	13.198954104409566	-7.666881320435735	6.305019382838747	0.9018503690122603	1.0405589151914658	0.4259199602742696	0.07155905891657757	0.19505096712697428	10.85219739479449	0.021166162627123664	0.027334243317626336	2.153370105337117e-08	7.666881320435735	0.13870854617920547	
LEGVDGGQS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	LEGVDGGQSPR	11	0	H3BRH4;O00418	H3BRH4	EEF2K	Eukaryotic elongation factor 2 kinase	1	LEGVDGGQS(1)PR;LEGVDGGQS(1)PR	86.11399999999999	0.022255	60538000.0	4722.4	4216.6	5988.2	4352.200000000001	4711.2	3826.3	3521.4	4130.6	4839.0	5206.2	True	False	4514.808950442099	4913.321480054726	4731.358653594878	3970.6493832264173	5330.805377579632	4565.6783222296335	4311.163589546978	3985.3244567536317	4614.035946201312	4263.306730890534	1.0589922882464124	1.152467272517456	1.109786124304168	0.9313543767461965	1.250392175386854	1.070924193454863	1.0112252909952946	0.9347965577698801	1.0822669438184	1.0	12.057757140858936	-8.70681245617691	4.369481737549859	1.0009172789892753	1.1000375416438257	0.2231991730734142	0.08178094067246619	0.30995264308335274	12.13148957962434	0.032623364557648665	0.02410934501595032	1.9642083088134776e-09	8.70681245617691	0.09912026265455043	
LELQGPRGS(ph)PNAR	ddPTM_K562_Methotrexat_30min_R1	2	LELQGPRGSPNAR	13	1	P19338;H7BY16	P19338	NCL	Nucleolin	1	LELQGPRGS(1)PNAR;LELQGPRGS(1)PNAR	146.84	3.1417e-08	11366600000.0	7101.9	7198.299999999999	8668.8	7585.0	6244.7	6459.700000000001	6208.299999999999	7619.299999999999	7286.1	8343.7	True	False	6789.7089795749525	8387.696724820456	6849.337346161327	6920.034826472218	7065.987506658918	7707.945602306862	7600.669311349042	7351.324900339648	6947.370801326182	6832.575077893931	0.9937262162756664	1.2276040335009206	1.0024532870954654	1.0128004079839903	1.0341617071314984	1.1281172199988112	1.1124165083732775	1.0759230329022036	1.016801238496985	1.0	12.738213692159952	-9.822567295096515	4.139796617915276	1.0019538927275675	1.0761430997382453	0.13146866188758577	0.06707186621394054	0.42990651452998074	13.734744262737768	0.06292822441525271	0.01699801925076218	1.5046403526739079e-10	9.822567295096515	0.07418920701067777	
LELSSSAS(ph)PQEER	ddPTM_K562_Methotrexat_30min_R1	4	LELSSSASPQEER	13	0	A0A075B6T1;Q9C0C7-4;Q9C0C7-2;Q9C0C7-3;Q9C0C7;Q9C0C7-5;Q9C0C7-6	A0A075B6T1	AMBRA1	Activating molecule in BECN1-regulated autophagy protein 1	1	LELS(0.043)S(0.068)S(0.213)AS(0.676)PQEER;LELS(0.002)S(0.006)S(0.017)AS(0.975)PQEER;LELSSSAS(1)PQEER;LELSSSAS(1)PQEER	194.55	3.7065e-07	297343000.0	3837.36	3144.03	4607.11	4011.4799999999996	3653.6600000000003	2982.97	3332.42	3582.7999999999997	3632.6099999999997	4301.74	True	False	3668.6742491251257	3663.5275181275097	3640.140570883319	3659.7997766244885	4134.180331093479	3559.386735191	4079.800013937111	3456.7908932496266	3463.730753984366	3522.6532012871303	1.0414520077606961	1.0399909695308371	1.033351954587315	1.0389327496919785	1.1735984483465205	1.010427803080487	1.158161130492893	0.9813032097472898	0.9832732761541116	1.0	11.782446735818988	-9.377281915504108	19.68462164204846	0.9866920405576183	1.0687263379797476	0.35212390750461264	0.051306062454175225	5.006431431535788	837.4558143661933	0.027348197776799713	0.01313747801829895	4.194865923981034e-10	9.377281915504108	0.08203429742212931	
LENS(ph)PLGEALR	ddPTM_K562_Methotrexat_30min_R1	2	LENSPLGEALR	11	0	Q9NX40;D6RG39;Q9NX40-4;Q9NX40-2;Q9NX40-3;D6RIT9;D6RBN5;D6RDK6;D6RI08;D6RIV2;D6RDK1;D6R9T5	Q9NX40	OCIAD1	OCIA domain-containing protein 1	1	LENS(1)PLGEALR;LENS(1)PLGEALR	147.39	1.2445e-07	179273000.0	7638.700000000001	6126.200000000001	8393.400000000001	7507.0	6478.700000000001	6231.700000000001	6184.0	7539.1	7115.6	7820.0	True	False	7302.91189432112	7138.4504224046095	6631.740042597646	6848.8729653694	7330.762608194333	7435.887829140002	7570.919417776608	7273.94557979744	6784.797309111397	6403.722222650684	1.1404167202146747	1.1147345519071876	1.0356070753881919	1.0695143741782192	1.1447658648066594	1.161182132922386	1.1822685548410292	1.1358933643418634	1.059508372351444	1.0	12.64469501339447	-6.303912224894505	5.161116042167267	1.107304781335332	1.1410196908796244	0.0322971635772511	0.05580127900706298	0.7379581168749243	48.11922104660379	0.014634471402468147	0.07149145066240521	4.966926976935051e-07	6.303912224894505	0.03371490954429235	
LEPQELSPLS(ph)ATVFPK	ddPTM_K562_Methotrexat_30min_R1	1	LEPQELSPLSATVFPK	16	0	Q3T8J9-3;A0A087WUE6;Q3T8J9-2;Q3T8J9;Q9H869-7;Q9H869-5;Q9H869-6;Q9H869-4;Q9H869-3;Q9H869-2;Q9H869;Q9H869-9;Q9H869-8	Q3T8J9-3;Q9H869-9	GON4L;YY1AP1	GON-4-like protein;YY1-associated protein 1	1	LEPQELS(0.322)PLS(0.675)AT(0.003)VFPK	145.79	2.1919e-09	24538000.0	3739.7	2424.5	5028.7	4034.3	2491.0	2463.4	2273.2	3443.3	3520.1	4910.5	True	False	3575.3072657903426	2825.107415546337	3973.244591251555	3680.6191826548265	2818.6101620714157	2939.4171860493097	2783.022965797182	3322.197187318982	3356.451319326977	4021.1608662821186	0.8891231623608227	0.7025601584943236	0.9880839696237107	0.9153125938127042	0.7009443928756434	0.7309872158302967	0.6920944121219172	0.8261786329355721	0.8346971013945736	1.0	11.973396336877258	-5.850313600658061	18.972824491296294	0.812289960769545	54.04888161285118	0.02718705921247422	0.11087957513599557	1726.2697325133906	218764.87504324937	0.027250480188057653	758.0182025604474	1.411517930451028e-06	5.850313600658061	53.236591652081636	
LEPSTST(ph)DQPVTPEPTSQATR	ddPTM_K562_Methotrexat_30min_R1	1	LEPSTSTDQPVTPEPTSQATR	21	0	Q14676;Q14676-3;Q14676-2	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	1	LEPSTS(0.044)T(0.822)DQPVT(0.134)PEPTSQATR	239.8	3.0255999999999995e-76	30008000.0	1209.4	934.08	1454.2	1094.0	837.12	792.85	1084.3	1129.1	839.47	965.55	True	False	1156.2362240946711	1088.420843354722	1148.9832928188223	998.0907185445757	947.2159529800175	946.0570414708114	1327.4818765677835	1089.3889130200278	800.4432229298648	790.6795386292029	1.4623322946983452	1.3765638165390135	1.4531592594527094	1.2623201559951336	1.197977064920892	1.1965113490997703	1.6789126462905972	1.3777881680215172	1.0123484721984701	1.0	9.62694928054326	-9.764085138724996	10.730550109309728	1.005603877517371	1.3727966039739996	0.5452763399567773	0.1349585866284992	0.09116985529821447	211.37561195242435	0.11609222343750035	0.036337214032684965	1.721531054403345e-10	9.764085138724996	0.3671927264566286	
LEPSTSTDQPVT(ph)PEPTSQATR	ddPTM_K562_Methotrexat_30min_R1	1	LEPSTSTDQPVTPEPTSQATR	21	0	Q14676;Q14676-3;Q14676-2	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	1	LEPSTST(0.001)DQPVT(0.995)PEPT(0.003)S(0.001)QATR	163.96	1.0477e-17	27783000.0	2340.1	2441.6	3437.1	2736.5	2626.6	2181.0	2535.0	2549.0	2730.1	2790.4	True	False	2237.232005956623	2845.0328998960367	2715.6996807506334	2496.5952936903377	2972.043938858605	2602.4473827935153	3103.5382800879192	2459.350225213045	2603.1782468948536	2285.0315204711583	0.979081463828263	1.2450738094454863	1.1884736190381628	1.0925868073695353	1.3006577424567822	1.1389109338224395	1.358203706287601	1.0762872210646546	1.13923078240868	1.0	11.157998351089319	-10.05129613500145	1.58264300930367	1.00425208224504	1.1847759009862617	0.19818709271099366	0.104890198506728	0.6734338607184371	3.757797183505146	0.09508161352672218	0.027702528109394515	8.885949995933154e-11	10.05129613500145	0.1805238187412217	
LEPT(ph)FES(ph)NNEQT(ph)IMTMLQPRYSK	ddPTM_K562_Methotrexat_30min_R1	1	LEPTFESNNEQTIMTMLQPRYSK	23	1	Q8WWQ8	Q8WWQ8	STAB2	Stabilin-2;190 kDa form stabilin-2	3	LEPT(0.999)FES(0.999)NNEQT(0.95)IMT(0.048)MLQPRY(0.002)S(0.002)K	52.318000000000005	0.025491	276150000.0	56.028999999999996	0.0	0.0	66.594	0.0	0.0	0.0	0.0	0.0	0.0	True	False	53.56603224723031	0.0	0.0	60.75580741385505	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
LEPTNVQTVTCS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	LEPTNVQTVTCSPR	14	0	J3KTI7;J3QR52;J3QLN7;Q99741	J3KTI7	CDC6	Cell division control protein 6 homolog	1	LEPTNVQTVT(0.004)CS(0.996)PR;LEPTNVQTVT(0.004)CS(0.996)PR;LEPTNVQTVT(0.014)CS(0.986)PR;LEPTNVQT(0.014)VT(0.045)CS(0.941)PR	151.49	2.5638e-21	198975000.0	5074.0	5200.1	7320.85	4880.76	6284.790000000001	6147.210000000001	5051.51	7240.63	6839.68	8880.02	True	False	4850.95303543605	6059.328138413079	5784.303630334669	4452.871348668759	7111.3500443535995	7335.071332408126	6184.43970700076	6985.972938871851	6521.704769686754	7271.7623288468685	0.6670945523332716	0.8332681768731496	0.795447288945144	0.6123510570476636	0.9779403840171016	1.0087061431188575	0.8504733003260115	0.9606987443963481	0.8968534001469413	1.0	12.82808933174672	-7.778675774504501	24.99997673309904	0.9451947446246748	0.7395141778220772	0.6894415083894975	0.07279591300313579	147.47902390077502	213905.24581528615	0.022583251886981057	0.025667567869035575	1.6646549460478125e-08	7.778675774504501	-0.2056805668025976	
LEPVS(ph)PPS(ph)PPHTDPELELVPPR	ddPTM_K562_Methotrexat_30min_R1	2	LEPVSPPSPPHTDPELELVPPR	22	0	C9J330;C9JQE8;Q9Y618-5;Q9Y618-4;Q9Y618;C9JE98;C9J0Q5;H7C1Y3;H0YGK8	C9J330	NCOR2	Nuclear receptor corepressor 2	2	LEPVS(1)PPS(1)PPHT(0.001)DPELELVPPR;LEPVS(1)PPS(1)PPHTDPELELVPPR	89.29700000000001	0.0015497	50125000.0	3191.4	2849.1	3513.8999999999996	2832.2	2667.5	2701.6	2327.8	3211.1000000000004	3025.3	3441.8	True	False	3051.109877274461	3319.8653485803547	2776.380410284733	2583.9054232741723	3018.3230057509036	3223.645964857848	2849.8684056760007	3098.163792931193	2884.654463327717	2818.4566682761024	1.0825463139515499	1.1779018588250771	0.985071170876966	0.9167802550800285	1.0709133972945017	1.1437628263519048	1.0111450134229352	1.0992412364551882	1.0234872495279852	1.0	11.46068967192346	-7.3442381434365895	0.0065558013751695	1.5038206712272547e-06	2.1227450478425367	0.05704687607008452	0.07249568962576511	40950.59672156893	62.703064676783065	9833.736046839522	10472.313570064443	4.526493036182691e-08	7.3442381434365895	2.1227435440218656	
LEQGEEPWVPDS(ph)PRPEE	ddPTM_K562_Methotrexat_30min_R1	2	LEQGEEPWVPDSPRPEE	17	1	A0A087WZ61	A0A087WZ61	ZNF316		1	LEQGEEPWVPDS(1)PRPEE;LEQGEEPWVPDS(1)PRPEE	204.71	6.2015e-16	29702000.0	2514.82	2402.96	3706.3	3241.3999999999996	2502.1800000000003	2796.8	2733.29	1983.04	2201.42	2205.7	True	False	2404.271523960445	2800.0082966637365	2928.398279586302	2957.2314945981575	2831.2605280336634	3337.2420175134816	3346.299860189942	1913.2953592022286	2099.0764647006595	1806.2263563300016	1.3311020047595734	1.5501978956574192	1.6212797855172463	1.637243020086827	1.567500395568575	1.8476322227377353	1.8526470109699615	1.0592777325483038	1.162133670203821	1.0	10.818762987387537	-9.27453010230056	24.798865686305533	1.0830291873193878	1.632563856734427	0.7549978225520919	0.1450697859286607	379.6893205410641	719273.1933678234	0.0844725362263955	0.04097753651757832	5.314591611434547e-10	9.27453010230056	0.5495346694150391	
LEQLCEEFS(ph)EEER	ddPTM_K562_Methotrexat_30min_R1	2	LEQLCEEFSEEER	13	0	Q9H3C7;Q9H3C7-3	Q9H3C7	GGNBP2	Gametogenetin-binding protein 2	1	LEQLCEEFS(1)EEER;LEQLCEEFS(1)EEER	142.91	3.1151e-06	11323900.0	1009.5	857.12	1336.53	1065.74	576.26	856.9	905.5699999999999	1034.49	1203.31	1535.17	True	False	965.1235887411694	998.7445114510524	1056.0106177631271	972.3082288680948	652.0482906444297	1022.4837974854485	1108.6671243783896	998.1064003454858	1147.3683807446782	1257.1358368985489	0.7677162327359975	0.7944602978744383	0.8400131368209077	0.7734313192970891	0.518677673093055	0.8133439263079119	0.881899228259658	0.7939527066604761	0.9126844904647096	1.0	10.295924829911293	-9.77705069929427	0.8863651593297849	0.9966952674684983	0.7542849633080028	0.4359014551839474	0.08925261986641274	0.578880025011065	0.985258959167213	0.09097842542623169	0.033297921809669846	1.670895543515972e-10	9.77705069929427	-0.24241030416049558	
LEQLCEEFS(ph)EEERVR	ddPTM_K562_Methotrexat_30min_R1	2	LEQLCEEFSEEERVR	15	1	Q9H3C7;Q9H3C7-3	Q9H3C7	GGNBP2	Gametogenetin-binding protein 2	1	LEQLCEEFS(1)EEERVR;LEQLCEEFS(1)EEERVR	97.384	0.0029679000000000003	21608800.0	1986.39	2024.0900000000001	2596.74	2676.6099999999997	1504.24	1490.68	1402.8400000000001	1999.62	2168.94	2226.83	True	False	1899.0706740362275	2358.5364688526233	2051.719760551744	2441.955757005115	1702.0739262120871	1778.7328127384853	1717.4625802124408	1929.2922312045935	2068.1064528112984	1823.529508576115	1.0414257982143091	1.2933908981238604	1.1251365831495697	1.3391369569401113	0.9333953293364223	0.9754340713287339	0.9418342681789145	1.0579989093299962	1.1341228332664377	1.0	10.832517830391485	-7.7736616499221745	24.99997932102379	1.0051811670532977	1.201128460254836	0.5019838717774392	0.09398507145466108	182.0319633466781	372335.03692161065	0.028587233695734664	0.03264759485267374	1.6839855093129625e-08	7.7736616499221745	0.19594729320153825	
LEQNGS(ph)PMGAR	ddPTM_K562_Methotrexat_30min_R1	4	LEQNGSPMGAR	11	0	C9JR56;Q9UPW6-2;Q9UPW6;F8WCV6	C9JR56	SATB2	DNA-binding protein SATB;DNA-binding protein SATB2	1	LEQNGS(1)PMGAR;LEQNGS(1)PMGAR;LEQNGS(1)PMGAR;LEQNGS(1)PMGAR	96.37100000000001	0.008389	197688000.0	21235.7	18961.0	27184.3	24011.9	20018.800000000003	19095.699999999997	19123.4	22006.1	21712.0	24407.800000000003	True	False	20302.20405490922	22093.98296810645	21478.6869254399	21906.814007879788	22651.623088107302	22785.673767817578	23412.309248691647	21232.13298982378	20702.61385904586	19987.310903582278	1.0157546531820099	1.1054004750657378	1.0746161416636755	1.096036085772473	1.1333001821694537	1.14000697130967	1.1713586365685398	1.0622806185507623	1.0357878535493927	1.0	14.28679676423669	-9.69280953117991	2.750720613774254	1.0098688357174317	1.1063774046764419	0.42813346278804276	0.040297521537658615	0.2652152360753743	3.730280469603843	0.037967429232100045	0.011243700640166901	2.0285721967167016e-10	9.69280953117991	0.09650856895901017	
LES(ph)IAT(ph)T(ph)LVS(ph)HKADVDMVDK	ddPTM_K562_Methotrexat_30min_R1	1	LESIATTLVSHKADVDMVDK	20	1	Q9P2R3;Q9P2R3-2;Q9P2R3-4	Q9P2R3	ANKFY1	Rabankyrin-5	4	LES(1)IAT(1)T(1)LVS(1)HKADVDMVDK	47.281000000000006	0.027666000000000003	9117200.0	1356.8	1869.8	1861.5	1875.3	1540.9	2034.4	1564.1	1266.7	1327.0	1332.1	True	False	1297.156696586448	2178.7526688342105	1470.796588902652	1710.8953605910804	1743.555358785968	2427.519007590613	1914.889240191524	1222.1494430276048	1265.3080596423104	1090.8437816870814	1.1891314946859637	1.997309518934587	1.3483109255368735	1.568414643153612	1.5983547672512863	2.225358982049887	1.7554202282108509	1.120370729104261	1.1599351629299341	1.0	10.09122879464402	-9.267146957327363	22.949139112275724	1.1051144884552024	1.6840250345714287	0.4677945792387509	0.28087413067579414	139.5671179280566	561161.4584851826	0.1494119291405791	0.0751515894414333	5.405713725060548e-10	9.267146957327363	0.5789105461162263	
LES(ph)LNIQR	ddPTM_K562_Methotrexat_30min_R1	1	LESLNIQR	8	0	Q14152-2;Q14152	Q14152-2	EIF3A	Eukaryotic translation initiation factor 3 subunit A	1	LES(1)LNIQR	84.31	0.028568	14600000.0	1279.7	1225.4	1309.4	1452.3	975.57	1230.2	922.09	1449.9	1094.6	1804.9	True	False	1223.445920269514	1427.8765217613864	1034.5748340097405	1324.9791138412118	1103.8745547218027	1467.9187392538213	1128.8921549058266	1398.9061951888568	1043.7122849167095	1478.0151201614083	0.8277627905023774	0.9660770734236153	0.699975812085575	0.8964584298004448	0.746862829523187	0.9931689596609239	0.7637893141326895	0.9464762410793793	0.7061580566257872	1.0	10.529445313057046														
LESS(ph)EGEIIQTVDR	ddPTM_K562_Methotrexat_30min_R1	2	LESSEGEIIQTVDR	14	0	A0A0A0MTP7;F8VXG7;Q99590-2;Q99590	A0A0A0MTP7	SCAF11	Protein SCAF11	1	LES(0.126)S(0.874)EGEIIQTVDR;LES(0.054)S(0.946)EGEIIQTVDR	150.12	2.567e-21	3282100.0	1842.18	1735.13	2678.7	1899.7400000000002	1901.7799999999997	1850.97	1808.19	2103.94	2464.6	2465.5	True	False	1761.1999729640493	2021.830740332819	2116.477476601416	1733.192743736628	2151.8974042650248	2208.643756134487	2213.722636162594	2029.9432376754557	2350.0212839445667	2018.9740588165294	0.8723242209443837	1.0014149173952063	1.0482935465956609	0.8584522105016946	1.0658370744626662	1.093943602935214	1.0964591776182708	1.0054330459626393	1.1639680429188322	1.0	10.979406658700874	-7.893028506281588	10.415348027081365	1.0744844079425269	0.9566076829443926	0.4470236175089257	0.06807375259649145	0.32634797581274017	29.571818396331935	0.020425134580019332	0.02317157155754697	1.2792973307055553e-08	7.893028506281588	-0.11787672499813429	
LETLGSASTST(ph)PGRR	ddPTM_K562_Methotrexat_30min_R1	3	LETLGSASTSTPGRR	15	1	Q96FF9;B5MBX0	Q96FF9	CDCA5	Sororin	1	LETLGS(0.001)AS(0.004)T(0.015)S(0.11)T(0.87)PGRR;LETLGSAS(0.011)T(0.071)S(0.286)T(0.631)PGRR;LETLGSAS(0.014)T(0.073)S(0.394)T(0.519)PGRR	95.87299999999999	0.004659300000000001	46473500.0	4490.12	3778.96	4973.200000000001	4897.4400000000005	4022.5200000000004	3588.08	3328.3	4398.82	4945.4800000000005	5032.99	True	False	4292.739701117883	4403.368908662812	3929.3932827991775	4468.089038966131	4551.55188644541	4281.425678704155	4074.7559990598124	4244.111007325087	4715.565714242544	4121.466740329753	1.041556312735021	1.068398506185811	0.9533968197168546	1.0841016852676688	1.1043524485851477	1.0388111680749859	0.9886664762297214	1.029757432177051	1.1441474628678572	1.0	12.008942137222439														
LEVGS(ph)T(ph)QLRT(ph)AGS(ph)CSHS(ph)FK	ddPTM_K562_Methotrexat_30min_R1	1	LEVGSTQLRTAGSCSHSFK	19	1	H0YDH5;H0YEJ6;H0YEQ0;H0YCT0;H0YDW3;F2Z2M3;H0YD32;H7BYQ5;O95236	H0YDH5	APOL3	Apolipoprotein L3	5	LEVGS(1)T(1)QLRT(0.999)AGS(0.88)CS(0.328)HS(0.794)FK	40.756	0.033678	0.0	210.58	229.75	443.36	356.88	294.65	440.99	314.36	367.32	180.59	352.72	True	False	201.32315534137257	267.7122824177235	350.3047948728875	325.5928844919451	333.4016396043128	526.2050762669019	384.86323224001484	354.401147401042	172.19441031710997	288.83899007331826	0.6970082373237392	0.9268564550435797	1.2128030041372424	1.1272469980915572	1.1542819739110806	1.8217937825268367	1.332449030313816	1.2269851355978	0.5961605470002527	1.0	8.174121693040778	-6.483928747154487	1.7089086676880603	1.224176702492417	0.6224279097141526	0.2192660436133963	0.2880669695410464	0.9014413206900903	3.644366939885624	0.08483654122616649	0.7732313409652677	3.2814912672614995e-07	6.483928747154487	-0.6017487927782644	
LEVS(ph)PEAQPTAR	ddPTM_K562_Methotrexat_30min_R1	4	LEVSPEAQPTAR	12	0	Q6WKZ4	Q6WKZ4	RAB11FIP1	Rab11 family-interacting protein 1	1	LEVS(0.722)PEAQPT(0.278)AR;LEVS(0.972)PEAQPT(0.028)AR;LEVS(0.939)PEAQPT(0.061)AR;LEVS(0.99)PEAQPT(0.01)AR	137.84	5.977999999999999e-06	122323000.0	5553.2	4389.53	6033.1	6037.199999999999	4984.7	4707.59	4474.71	5603.42	5492.799999999999	6007.5	True	False	5309.087977213933	5114.825223247314	4766.834757189679	5507.9280493576825	5640.27542146824	5617.265142028851	5478.277624178384	5406.344542551312	5237.440926905262	4919.48353613478	1.0791962079387838	1.039707763158003	0.9689705681858962	1.1196150996137375	1.1465177960326673	1.141840418972581	1.1135879577478263	1.0989658777878657	1.0646322705290119	1.0	12.264291149216984	-7.287476369259391	24.928899151398713	1.1065162683753758	1.0303331265480702	0.29394939143951637	0.04739973686240913	769.6315142787938	736875.1806367664	0.013282460933014014	0.019708956109212996	5.158502326437737e-08	7.287476369259391	-0.07618314182730557	
LEYNGVIS(ph)AHHNLRLQGS(ph)S(ph)DSPASAS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LEYNGVISAHHNLRLQGSSDSPASASR	27	1	A0A2R8YEH2	A0A2R8YEH2			4	LEY(0.385)NGVIS(0.618)AHHNLRLQGS(0.933)S(0.861)DS(0.247)PAS(0.425)AS(0.531)R	41.16	0.033091	64842000.0	964.81	925.39	985.13	1234.4	886.08	937.1	886.35	710.03	889.64	912.02	True	False	922.3981076308744	1078.2949685594658	778.3646755979958	1126.1820685296375	1002.6150511474275	1118.1813124327393	1085.136550120682	685.0578424511646	848.2808305803962	746.8443403455085	1.2350607185483262	1.4438014862114643	1.042204691861098	1.5079207375510646	1.3424685667211365	1.4972079883680196	1.4529621388289173	0.917269912140246	1.1358201230901217	1.0	9.544663773066736	-9.260303985871065	24.99659711120589	1.0199087541377327	1.3614800980497066	0.5548495020102829	0.14059137709102312	75.39188998666961	1659858.7391900814	0.0696135262751848	0.03722835222444536	5.491563554783018e-10	9.260303985871065	0.34157134391197386	
LFAPQQILQCS(ph)PAN	ddPTM_K562_Methotrexat_30min_R1	2	LFAPQQILQCSPAN	14	0	K7ERV3;P04183	K7ERV3	TK1	Thymidine kinase;Thymidine kinase, cytosolic	1	LFAPQQILQCS(1)PAN;LFAPQQILQCS(1)PAN	95.65100000000001	0.0067976	12329200.0	3305.5	2986.5	3379.2	3363.2	2673.6000000000004	2662.1	2786.4	3026.7	2999.6000000000004	3417.9	True	False	3160.194177893944	3479.9683631796797	2669.952099500317	3068.353477704858	3025.2252626712725	3176.5131488925367	3411.321129639833	2920.2492454501075	2860.1492507182193	2798.8851898718385	1.1290903211498469	1.2433408757788411	0.9539341267594384	1.0962770065768073	1.080867937569743	1.1349208464810199	1.2188142414644876	1.0433615698198133	1.021888736654177	1.0	11.450636593509433	-9.502437897419371	23.471435274244296	1.018171217526825	1.1194018918862487	0.28296105418824036	0.07437849886846291	469.1829289686195	538751.1746658069	0.04274191202869859	0.020085885552391124	3.1445760514052925e-10	9.502437897419371	0.10123067435942379	
LFAYPDTHR	ddPTM_K562_Methotrexat_30min_R1	1	LFAYPDTHR	9	0	P04040	P04040	CAT	Catalase	0		76.221	0.023627000000000002	0.0	2752.5	2447.9	2914.7	2592.8	2050.9	1883.5	2510.7	3065.6	3397.1	3665.4	False	True	2631.50339575044	2852.373867814345	2302.9443017322374	2365.4932495816943	2320.629298029815	2247.4597182446514	3073.7883865154768	2957.7811104013795	3239.16956247995	3001.5605415478008	0.8767117502129292	0.9502969633067853	0.767248992600592	0.78808780194115	0.7731409264972369	0.7487637471026036	1.0240634309946088	0.98541444340688	1.0791618285365727	1.0	11.551497052113794	-8.773143497912676	24.981949445685558	1.0209445360235503	0.8177966038325255	0.734790477812548	0.06027000797903113	127.77127604848692	272719.69602871785	0.027558226532881622	0.01875153810548998	1.6859958530779937e-09	8.773143497912676	-0.20314793219102478	
LFLDHDKTLQTDSIDSFET(ph)QRTPR	ddPTM_K562_Methotrexat_30min_R1	1	LFLDHDKTLQTDSIDSFETQRTPR	24	2	A0A3B3IS71;P06400	A0A3B3IS71	RB1	Retinoblastoma-associated protein	1	LFLDHDKTLQTDSIDS(0.003)FET(0.499)QRT(0.499)PR	57.045	0.013291999999999998	25680000.0	2339.7	1308.0	2095.4	2379.7	1222.7	1288.1	1542.9	2523.3	2454.9	3024.9	True	False	2236.8495894776765	1524.124767801448	1655.604175335277	2171.0753957226	1383.5064813989252	1537.007094808037	1888.9346005316163	2434.554108779944	2340.7722348273605	2477.061298119701	0.9030255291524818	0.6152955395001276	0.6683743258965859	0.876472212201866	0.5585273495044808	0.6204961887599453	0.7625707938537805	0.982839669986357	0.9449795354697943	1.0	11.274413855062708	-9.18374942170101	3.858626927230161	0.9750389328019264	0.701544585357693	0.5702259618321954	0.10444589891576267	0.16931855075855498	4.797501061955103	0.0542442200659309	0.028975626435007562	6.550139936296492e-10	9.18374942170101	-0.2734943474442334	
LFLINEQS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	LFLINEQSPR	10	0	E9PFF8;Q6NW34-2;Q6NW34	E9PFF8	C3orf17	Uncharacterized protein C3orf17	1	LFLINEQS(1)PR	80.834	0.028931000000000002	9126800.0	563.48	490.73	551.24	595.21	495.34	625.71	590.54	807.38	713.23	627.51	True	False	538.7100938919012	571.8147915162114	435.54225714031605	543.0288634231416	560.4858922844058	746.619601965947	722.9836275830846	778.9839877726599	680.0720929756482	513.8618583037761	1.0483558668279984	1.1127792076332228	0.8475862726570369	1.0567604009677696	1.090732622449412	1.452957813273958	1.4069610653135565	1.515940471519008	1.3234531459885368	1.0	9.005236761010725	-8.139894758240622	4.168591302387189	1.3756163275245417	1.0172325244997222	0.5251403712956272	0.14570007293824616	0.16578267701334334	4.841759484609412	0.04746075404952153	0.04763472042055216	7.246115325415458e-09	8.139894758240622	-0.3583838030248194	
LFMRT(ph)TVLIADLLIY(ph)IPAVVLYCCCLK	ddPTM_K562_Methotrexat_30min_R1	1	LFMRTTVLIADLLIYIPAVVLYCCCLK	27	1	A0A3B3IS62;A0A3B3ITD6;A0A3B3ITI5;S4R350;Q9Y672	A0A3B3IS62	ALG6	Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase	2	LFMRT(0.5)T(0.5)VLIADLLIY(0.725)IPAVVLY(0.275)CCCLK	43.798	0.027937	0.0	3879.0	2261.2	5396.5	3768.1	2481.5	2157.1	2012.7	3255.1	3040.5	4414.6	True	False	3708.4838045834563	2634.824866171739	4263.848397535945	3437.756523352664	2807.860745556089	2573.9290460448856	2464.099209598797	3140.6162879917556	2899.147818645402	3615.073161651369	1.0258392123077855	0.72884413353564	1.1794639297391742	0.9509507469503863	0.7767092448755465	0.7119991576793185	0.6816180750469776	0.8687559414584901	0.8019610361968631	1.0	11.81980912931664	-7.734373350881656	6.629418054973032	0.7891119955379169	0.9700021292594572	0.2661954869565103	0.13191715458523098	0.22248525830245042	32.509991021767476	0.03894136024494686	0.049169636832764166	1.8434299923332892e-08	7.734373350881656	0.18089013372154028	
LFPADT(ph)SPSTATK	ddPTM_K562_Methotrexat_30min_R1	4	LFPADTSPSTATK	13	0	Q6NZY4-2;Q6NZY4	Q6NZY4-2	ZCCHC8	Zinc finger CCHC domain-containing protein 8	1	LFPADT(0.5)S(0.5)PSTATK;LFPADT(0.459)S(0.459)PS(0.075)T(0.007)ATK;LFPADT(0.499)S(0.499)PS(0.003)TATK;LFPADT(0.5)S(0.5)PSTATK	185.2	4.0521e-07	166496000.0	20589.6	15633.9	28626.5	21485.0	16104.8	14494.0	14742.9	19219.4	19168.3	25186.300000000003	True	False	19684.50583729091	18217.13624413688	22618.188854269025	19601.443407614446	18222.863483792753	17294.760369651172	18049.370615190608	18543.442808340373	18277.169916836254	20624.817009763025	0.95440875077694	0.883262927157781	1.0966491893509849	0.9503814457280202	0.8835406139684403	0.838541275855416	0.8751287638889937	0.899083991851302	0.8861736765075064	1.0	14.332093698894397	-7.665832321655605	4.8305031098053295	0.888133004900454	0.9765258770579602	0.25117800877718544	0.06250300917594365	0.2679943029068314	10.539438995972292	0.01865039339474499	0.024130667083119728	2.158577661427145e-08	7.665832321655605	0.08839287215750624	
LFPDT(ph)PLALDANK	ddPTM_K562_Methotrexat_30min_R1	1	LFPDTPLALDANK	13	0	Q12906;Q12906-7;Q12906-5;Q12906-4;Q12906-2;Q12906-6;Q12906-3	Q12906	ILF3	Interleukin enhancer-binding factor 3	1	LFPDT(1)PLALDANK	162.64	0.00010071	29744000.0	5362.3	3669.7	7179.5	5164.9	3997.2	3618.6	3641.9	5241.9	4699.4	6108.6	True	False	5126.579712636727	4276.05555076527	5672.621063672624	4712.101236024569	4522.901862638244	4317.8432367614005	4458.688781953529	5057.539405862797	4480.92591973103	5002.273346455749	1.0248499747158066	0.8548224486362737	1.1340086138419117	0.941991952391651	0.9041692745245213	0.8631761876469054	0.8913324948770812	1.011048188609326	0.8957779012428204	1.0	12.288368179606257	-5.917665998075145	17.63138259896162	0.9445404851272458	3.2970463506448864	0.0830017061684134	0.08056791463317145	286.4572246338846	65232.447060636005	0.01947664237436179	1675.1448862212553	1.2087430831816243e-06	5.917665998075145	2.3525058655176405	
LFPDT(ph)PLALDANKK	ddPTM_K562_Methotrexat_30min_R1	1	LFPDTPLALDANKK	14	1	Q12906;Q12906-7;Q12906-5;Q12906-4;Q12906-2;Q12906-6;Q12906-3	Q12906	ILF3	Interleukin enhancer-binding factor 3	1	LFPDT(1)PLALDANKK	94.454	0.008043699999999999	9515300.0	2350.1	1312.6	4339.7	2514.7	1974.4	1374.3	1198.7	2639.4	2627.4	3484.5	True	False	2246.792417930285	1529.4848396148163	3428.8562755094476	2294.2401553236214	2234.068207143238	1639.8640248386657	1467.538988694827	2546.57080597384	2505.2527474786802	2853.4232845046427	0.7874024264578504	0.5360175084855441	1.2016640833239365	0.8040307821774518	0.782943147368013	0.5747005828906832	0.5143081983890074	0.8924616336464526	0.877981462155761	1.0	11.478478060729719	-9.494148380562926	24.606720670218873	0.9210678609762611	0.7467616381172214	0.1651450167475842	0.18690002185265603	1141.5486798678176	977708.8070256362	0.10809914494390155	0.05175467157522393	3.2051740612576745e-10	9.494148380562926	-0.17430622285903974	
LFPEFDDS(ph)DYDEVPEEGPGAPAR	ddPTM_K562_Methotrexat_30min_R1	3	LFPEFDDSDYDEVPEEGPGAPAR	23	0	Q96P48-3;Q96P48	Q96P48-3	ARAP1	Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1	1	LFPEFDDS(0.998)DY(0.002)DEVPEEGPGAPAR;LFPEFDDS(0.996)DY(0.004)DEVPEEGPGAPAR;LFPEFDDS(0.999)DY(0.001)DEVPEEGPGAPAR	136.37	1.9255e-13	26416000.0	5265.2	4840.0	5463.7	6293.700000000001	4655.400000000001	4568.23	4679.889999999999	5198.3	5257.26	6014.599999999999	True	False	5033.748112372467	5639.727734066517	4316.944035878283	5741.941092599632	5267.666699521184	5450.975794359843	5729.474462169879	5015.472842575509	5012.8511300943	4925.297657334372	1.022019066172904	1.145053177784752	0.8764838871108275	1.1658059049586937	1.0695123555988504	1.1067302270031685	1.16327476241725	1.0183085757480779	1.0177762805116053	1.0	12.26599520025319	-5.968921545022422	17.589349635716555	1.0663536803589102	0.865964061733994	0.01832084486897645	0.08499396448926835	5343.9788115512465	14738.395911487545	0.019867698413995168	33942.57203556436	1.0741834452612353e-06	5.968921545022422	-0.20038961862491622	
LFPS(ph)PGLPTRT(ph)SPVR	ddPTM_K562_Methotrexat_30min_R1	1	LFPSPGLPTRTSPVR	15	1	M0QYT1;M0R2C2;A0A384DVU0;Q8IY17-5;Q8IY17-2;Q8IY17-3;Q8IY17	M0QYT1	PNPLA6	Neuropathy target esterase	2	LFPS(1)PGLPT(0.254)RT(0.61)S(0.136)PVR	75.55	0.024819	0.0	2949.2	2408.0	3377.9	2930.8	3155.6	2506.6	2681.0	2922.3	3126.5	3238.5	True	False	2819.55669927237	2805.8810709983827	2668.924951734767	2673.861314360548	3570.6167111331047	2990.9649746493455	3282.2824966136914	2819.521052624594	2981.1496974164925	2651.9762682933792	1.0631907732292165	1.0580340045063998	1.0063909634652557	1.0082523536612387	1.346398440220921	1.127824939615359	1.237674158647706	1.0631773316882034	1.1241238215660752	1.0	11.372852149943416														
LFQECCPHSTDR	ddPTM_K562_Methotrexat_30min_R1	3	LFQECCPHSTDR	12	0	Q5T6W2;P61978-3;P61978;P61978-2	Q5T6W2	HNRNPK	Heterogeneous nuclear ribonucleoprotein K	0	;;	126.95	0.00056825	99770000.0	5347.09	4517.63	6473.63	5187.35	4643.13	4380.63	4493.29	5391.99	5640.9	6003.6	False	True	5112.0383260247845	5264.091570919615	5114.9035303883265	4732.583079380443	5253.782979453494	5227.124749420796	5501.024662144477	5202.350655490972	5378.65579023083	4916.28986392655	1.039816297963744	1.0707447519612445	1.0403990960580072	0.9626330445049504	1.068647928594144	1.063225500142904	1.1189382266713845	1.058186315185238	1.0940477349997009	1.0	12.263354264026251	-7.961754206441832	24.99936391384847	1.0728996622619098	1.0302002602298876	0.18968668281788648	0.038205879172467413	250.97225908858582	164047.18495354705	0.011798294982184283	0.013378001069380394	1.0920582234912369e-08	7.961754206441832	-0.04269940203202216	
LFQLPTPPLS(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	LFQLPTPPLSR	11	0	A0A0C4DGS9;Q9Y6K0	A0A0C4DGS9	CEPT1	Choline/ethanolaminephosphotransferase 1	1	LFQLPT(0.083)PPLS(0.917)R;LFQLPT(0.326)PPLS(0.674)R	92.906	0.013994999999999999	34148000.0	4436.7	4270.0	6265.2	5318.4	4093.7	4089.6	4633.4	5611.4	5490.0	6015.1	True	False	4241.6679803545785	4975.544922409922	4950.220139023852	4852.144129348689	4632.0933040834	4879.857320803466	5672.557896236432	5414.043881428205	5234.77109829411	4925.707102489274	0.8611287460050138	1.0101179016298922	1.0049765517974445	0.9850654999150459	0.9403915433263395	0.9906917360834068	1.1516230620715808	1.0991404419260218	1.0627451022511358	1.0	12.26611512801878	-8.615323751549068	6.808450645868078	1.0860945691596362	0.9668427320202898	0.5247772493138393	0.052910416312540454	0.17069475761498448	10.621437072431116	0.020004045085584413	0.015428404206504223	2.424801815086011e-09	8.615323751549068	-0.1192518371393464	
LFRPPS(ph)PAPAAPGAR	ddPTM_K562_Methotrexat_30min_R1	1	LFRPPSPAPAAPGAR	15	1	Q86U90	Q86U90	YRDC	YrdC domain-containing protein, mitochondrial	1	LFRPPS(1)PAPAAPGAR	76.068	0.025883999999999997	2801600000.0	1706.3	1767.4	2096.8	1905.1	1819.3	1784.5	1580.8	1664.6	1484.9	2106.2	True	False	1631.293095065932	2059.4328093366053	1656.7103344674088	1738.0828408585655	2058.5698385614314	2129.3293693695696	1935.33464030098	1606.0550744957375	1415.867323106908	1724.7467705047147	0.9458160020723302	1.194049378468441	0.9605527969665968	1.0077321903608774	1.1935490321045967	1.2345750725751243	1.1220978484480018	0.931183117406711	0.8209131608882974	1.0	10.752168843796335	-9.317079276654455	5.3713773364667485	0.9026466632745367	1.0986761271821404	0.38432983210113547	0.10217318776978651	0.2224386302520213	14.073634671758139	0.05931495544762695	0.028038509328783098	4.818598303042741e-10	9.317079276654455	0.19602946390760367	
LFS(ph)LSNPSLSTTNLSGPSR	ddPTM_K562_Methotrexat_30min_R1	1	LFSLSNPSLSTTNLSGPSR	19	0	Q6UUV7;Q6UUV7-3	Q6UUV7	CRTC3	CREB-regulated transcription coactivator 3	1	LFS(0.949)LS(0.045)NPS(0.006)LSTTNLSGPSR	190.25	1.6738e-13	51253000.0	1519.9	1159.9	1146.4	1380.0	1305.0	942.14	1123.0	1289.1	1371.2	1729.8	True	False	1453.0870158768744	1351.553760071024	905.7863064829438	1259.0175425882212	1476.63037394749	1124.1952211027435	1374.8613367016699	1243.7616223311643	1307.4532112897796	1416.5164578952879	1.0258172489121125	0.9541391153896032	0.6394463696022242	0.8888125058983893	1.0424378521810622	0.7936337165987567	0.9705932670521098	0.8780424790681154	0.9230060152159767	1.0	10.468131648528455	-11.07836989073204	0.49318963983391617	1.0121264426618883	0.8901500198166407	0.06584648852411412	0.11147563975898644	14.66274559018515	4.226833987438542	0.4617092647675924	0.05928683787888736	8.348916340458688e-12	11.07836989073204	-0.12197642284524768	
LFSLS(ph)NPSLSTTNLSGPSR	ddPTM_K562_Methotrexat_30min_R1	1	LFSLSNPSLSTTNLSGPSR	19	0	Q6UUV7;Q6UUV7-3	Q6UUV7	CRTC3	CREB-regulated transcription coactivator 3	1	LFS(0.304)LS(0.696)NPSLSTTNLSGPSR	142.72	1.5094000000000002e-09	52599000.0	1304.9	1041.6	1429.3	1318.6	925.29	949.81	894.53	1571.7	1762.6	1459.0	True	False	1247.5381584431425	1213.7066958272076	1129.309462540188	1203.0003852585712	1046.9818534175279	1133.3473400509447	1095.1511233479466	1516.422420151959	1680.6571107200732	1194.7609620009398	1.0441738541187464	1.01585734253866	0.9452179125846762	1.0068962943381012	0.8763107322020991	0.9485975656191997	0.9166278093936293	1.2692266222126247	1.4066890065652742	1.0	10.222506289117646	-9.265203281932694	24.956885291097883	1.2534683855799384	0.9636124732733827	0.5614117116420347	0.10462180686195814	206.91159312444844	1371930.8793433732	0.05230183438452449	0.02662814126277886	5.429961096670243e-10	9.265203281932694	-0.2898559123065557	
LFSLS(ph)NPSLSTTNLSGPSRR	ddPTM_K562_Methotrexat_30min_R1	1	LFSLSNPSLSTTNLSGPSRR	20	1	Q6UUV7;Q6UUV7-3	Q6UUV7	CRTC3	CREB-regulated transcription coactivator 3	1	LFS(0.128)LS(0.862)NPS(0.009)LSTTNLSGPSRR	61.141000000000005	0.01937	13540000.0	345.84	252.58	442.82	407.86	315.09	332.98	323.28	375.17	348.8	435.86	True	False	330.6372876971235	294.31455187407477	349.8781334933507	372.1035470435011	356.5298578751836	397.3236724083378	395.7837693044665	361.9750584516196	332.5843641320556	356.92153043024643	0.9263584836099998	0.8245917569592877	0.9802662592856044	1.0425360067098046	0.9989026367936092	1.1131961468656406	1.108881744475807	1.0141586527864583	0.9318136782926659	1.0	8.479463120884441	-6.945529711963753	4.549458193801482	1.0347316261004271	0.8767635233790722	0.5468718280851258	0.0553284706299677	0.14732784413089423	6.394371656097905	0.015518467819371775	0.03350935500539396	1.1336272791074678e-07	6.945529711963753	-0.15796810272135497	
LFVGGIKEDTEEHHLR	ddPTM_K562_Methotrexat_30min_R1	2	LFVGGIKEDTEEHHLR	16	1	P22626;P22626-2;A0A087WUI2	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	0	;	128.95	0.00033229	23696000.0	8655.9	5859.0	9200.7	7481.2	5736.5	5297.0	5249.9	8949.7	9223.4	11558.2	False	True	8275.397000282012	6827.100164028047	7269.5988050049045	6825.334811312319	6490.950298965344	6320.570282740604	6427.323714648351	8634.933978261755	8794.606147177756	9464.89797875206	0.8743250079250316	0.7213073167142786	0.7680588656448885	0.7211208009462596	0.6857918926899168	0.667790640419979	0.6790695186654075	0.9123113632758105	0.9291812935459995	1.0	13.20837124000029	-9.362865789978917	4.597828218942793	0.9507363946945578	0.7278173205336981	0.7426140427859789	0.05856096896367175	0.12200576276178735	4.2210717848081	0.03571294079335757	0.016287269261047663	4.336448669537986e-10	9.362865789978917	-0.22291907416085976	
LFVGNLPADITEDEFKR	ddPTM_K562_Methotrexat_30min_R1	1	LFVGNLPADITEDEFKR	17	1	P23246-2;P23246	P23246-2	SFPQ	Splicing factor, proline- and glutamine-rich	0		125.39	1.0759e-06	0.0	782.94	646.8	896.73	911.14	761.15	592.64	628.27	811.16	705.97	1018.8	False	True	748.5228950658858	753.6727062797987	708.5186275405183	831.2617708361096	861.254566383243	707.1592924982805	769.1755405249849	782.6310430301348	673.1496087910185	834.2854476261532	0.8972023870195828	0.9033751079133321	0.8492520510294319	0.9963757287165357	1.0323260088424493	0.8476227105607642	0.9219572781876637	0.9380854541536185	0.8068576656902923	1.0	9.704397270586588	-6.700695977801927	0.004831200550188435	1.8210446753977092	3.7463821610050926e-07	0.036862431546879404	0.06870998457134735	139329.1831443922	121.49104856826541	22208.879542796585	23597.720739887838	1.9920673718223503e-07	6.700695977801927	-1.8210443007594932	
LFVLLPEQS(ph)PVSYSKR	ddPTM_K562_Methotrexat_30min_R1	2	LFVLLPEQSPVSYSKR	16	1	Q96K76-2;Q96K76-4;Q96K76	Q96K76-2	USP47	Ubiquitin carboxyl-terminal hydrolase 47	1	LFVLLPEQS(0.938)PVS(0.03)Y(0.001)S(0.03)KR;LFVLLPEQS(0.998)PVS(0.002)YS(0.001)KR	81.788	0.013975999999999999	38756000.0	8478.8	6160.4	10040.0	9306.3	5587.7	5634.3	5861.3	7438.799999999999	7423.9	10115.7	True	False	8106.082104228461	7178.3013911040025	7932.741204718034	8490.431127962867	6322.580490809497	6723.048734008947	7175.845728236418	7177.173187648017	7078.764509403583	8283.648706862854	0.9785642041426403	0.8665627485092299	0.9576385341094802	1.0249627221551172	0.7632603354571703	0.8116047616117547	0.8662663015020614	0.8664265520702077	0.8545466810463551	1.0	13.01605065767813	-7.7565519898459385	24.999995155230962	0.8515305772824452	0.9505275507724043	0.32442608044737664	0.06730850069915863	144.44768299360373	738874.5214318678	0.01987791543416361	0.02484002318033565	1.751652729479428e-08	7.7565519898459385	0.09899697348995906	
LGAGEGGEASVS(ph)PEK	ddPTM_K562_Methotrexat_30min_R1	1	LGAGEGGEASVSPEK	15	0	Q13428;Q13428-3;Q13428-4;E7ETY2;Q13428-6;Q13428-7;Q13428-2;Q13428-8;A0A6I8PRA0;A0A3B3IS06	Q13428	TCOF1	Treacle protein	1	LGAGEGGEAS(0.032)VS(0.968)PEK	151.38	1.0957999999999998e-29	0.0	1439.5	928.88	1459.2	1280.4	868.48	934.03	880.2	988.99	971.21	1560.1	True	False	1376.2213036086328	1082.3616317396093	1152.9338611478647	1168.1493199492456	982.7003426558745	1114.5180783817643	1077.6072560683967	954.2066611351314	926.0586590845586	1277.55077232191	1.0772341369317104	0.8472161382458794	0.9024563924394505	0.9143662586702284	0.769206487871982	0.8723865246906479	0.8434946613588421	0.7469031226061487	0.7248703371698292	1.0	10.319164912436715	-3.000000000072419	0.7461322785115827	0.8246316126882893	40.98288861247667	0.40822231209028437	0.08085382672961229	361.92570364264964	1.5842770527323637	0.02970754616697525	24416.52103636472	0.000999999999833249	3.000000000072419	40.158256999788385	
LGAGEGGEASVS(ph)PEKTSTTSK	ddPTM_K562_Methotrexat_30min_R1	3	LGAGEGGEASVSPEKTSTTSK	21	1	Q13428;Q13428-3;Q13428-4;E7ETY2;Q13428-6;Q13428-7;Q13428-2;Q13428-8;A0A6I8PRA0;A0A3B3IS06	Q13428	TCOF1	Treacle protein	1	LGAGEGGEAS(0.005)VS(0.995)PEKTSTTSK;LGAGEGGEAS(0.074)VS(0.915)PEKT(0.008)S(0.002)T(0.001)TSK;LGAGEGGEAS(0.057)VS(0.586)PEKT(0.244)S(0.078)T(0.025)T(0.008)S(0.003)K	109.39	3.6918e-05	353823000.0	10393.4	7769.3	20210.600000000002	13360.9	7518.1	5676.4	5922.6	9108.6	9071.400000000001	16251.5	True	False	9936.518580705766	9053.044769479959	15968.671254190673	12189.570641135486	8506.861926723848	6773.283963177033	7250.893813668133	8788.245375196373	8649.672594000951	13308.195869745208	0.746646553594496	0.6802608601561921	1.1999125509186244	0.9159446374581246	0.6392197717846421	0.5089558366491573	0.5448442361862348	0.6603633926951383	0.649950803148688	1.0	13.70002738459421	-7.765018356115082	24.127822072636082	0.6362082197984285	0.893461977535064	0.25380838849407195	0.1786318360987827	72.87976291557653	491323.00602468767	0.0553524774824488	0.06530585409334101	1.7178357786880834e-08	7.765018356115082	0.2572537577366355	
LGAGGGS(ph)PEKSPSAQELK	ddPTM_K562_Methotrexat_30min_R1	4	LGAGGGSPEKSPSAQELK	18	1	H3BS86;Q9UNE7	H3BS86	STUB1	E3 ubiquitin-protein ligase CHIP	1	LGAGGGS(0.996)PEKS(0.003)PS(0.001)AQELK;LGAGGGS(0.99)PEKS(0.008)PS(0.002)AQELK;LGAGGGS(0.993)PEKS(0.007)PS(0.001)AQELK;LGAGGGS(0.979)PEKS(0.007)PS(0.014)AQELK	135.55	2.3255e-07	47925900.0	6847.2	4293.84	10606.9	7271.1	4496.860000000001	4075.27	4029.05	6315.7	5786.1	8563.2	True	False	6546.205286605786	5003.324077199214	8380.656641864913	6633.653952111021	5088.275910643305	4862.758251112758	4932.6670246107415	6093.5732512271625	5517.10547392342	7012.321500895441	0.9335289726476268	0.7135046612680711	1.1951329728385587	0.9459996880154359	0.7256193130896174	0.6934591134322359	0.70342853275921	0.8689808718052989	0.7867730356086655	1.0	12.775676426953854	-7.748864721394765	24.15956920900927	0.7800325641688605	0.9480812692075771	0.21864762203212584	0.13745679136234032	219.70394963365396	422111.77081572864	0.04097173468366914	0.052491285777805145	1.7829340479790388e-08	7.748864721394765	0.1680487050387166	
LGAGGGS(ph)PEKSPSAQELKEQGNR	ddPTM_K562_Methotrexat_30min_R1	1	LGAGGGSPEKSPSAQELKEQGNR	23	2	H3BS86;Q9UNE7	H3BS86	STUB1	E3 ubiquitin-protein ligase CHIP	1	LGAGGGS(0.871)PEKS(0.128)PS(0.001)AQELKEQGNR	100.46	5.0683e-05	11880000.0	2002.5	1187.5	3094.1	2427.6	930.47	914.74	938.95	1108.0	1296.5	2614.6	True	False	1914.4724977257972	1383.7141909512375	2444.690693378294	2214.776077092148	1052.8431142122001	1091.500558888831	1149.533439088186	1069.031011979622	1236.2259979851206	2141.0706040079904	0.8941659813282143	0.6462720978752337	1.1418076026086856	1.034424587842262	0.4917367564812314	0.5097919502727233	0.5368965586358104	0.4992974122284631	0.5773868436056988	1.0	11.06411665552456	-7.764627514562487	24.99997377073003	0.5695656985331435	0.9241493396003198	0.4241967977823442	0.18401648403967188	74.07090839028885	580832.5353919213	0.05549470910514704	0.06558529999499348	1.719382433858837e-08	7.764627514562487	0.3545836410671762	
LGAHEGLS(ph)PTPFMNSNLMGK	ddPTM_K562_Methotrexat_30min_R1	2	LGAHEGLSPTPFMNSNLMGK	20	0	Q99081;Q99081-3;B4DGI9;H0YNQ5	Q99081	TCF12	Transcription factor 12	1	LGAHEGLS(0.977)PT(0.023)PFMNSNLMGK;LGAHEGLS(0.953)PT(0.047)PFMNSNLMGK	97.77600000000001	0.00015501	36782000.0	4125.5	2662.8	4675.2	4564.0	2444.7	2378.4	2280.7	4071.9	4155.1	5599.0	True	False	3944.147959734219	3102.782440138911	3693.939410388224	4163.881206067129	2766.220900528298	2837.99213903535	2792.205031714601	3928.68896902511	3961.9303079274805	4584.966844580711	0.8602347832451788	0.6767295261483306	0.8056632764431756	0.9081595019577312	0.6033240793873756	0.6189776797164344	0.6089913245533937	0.8568631142161255	0.8641131860332555	1.0	12.162695585912747	-9.791298298674697	1.930608129596363	0.9827843003670653	0.7274182548165247	0.3979847631991622	0.10466104608939424	0.33718418839884085	2.4836793666334	0.10470746628324228	0.0304106841134761	1.6169690278892007e-10	9.791298298674697	-0.25536604555054065	
LGAS(ph)NSPGQPNSVKR	ddPTM_K562_Methotrexat_30min_R1	1	LGASNSPGQPNSVKR	15	1	P49756	P49756	RBM25	RNA-binding protein 25	1	LGAS(0.5)NS(0.492)PGQPNS(0.008)VKR	132.23	0.00013961	46063000.0	3796.2	2524.8	5124.3	4366.1	2831.8	2722.7	2633.5	3524.2	3698.7	5381.1	True	False	3629.3235934415325	2941.9802857378404	4048.7794577028544	3983.3307918075616	3204.2313355896586	3248.8232412342513	3224.129412470035	3400.251888464424	3526.7482443097306	4406.530646074883	0.8236238176794145	0.667640945231689	0.9188134119319706	0.9039607600041799	0.7271551233721312	0.7372746276320897	0.7316707113660783	0.7716392240442486	0.8003457884608567	1.0	12.10542752331492	-10.17818140704102	6.165595067829463	0.9999999015901544	0.7844562247352816	0.42319658408897554	0.07481557878894088	7.156257886356602	247.58900110319934	0.07603620999782751	0.0197236769059519	6.634658794002606e-11	10.17818140704102	-0.21554367685487275	
LGASNS(ph)PGQPNSVK	ddPTM_K562_Methotrexat_30min_R1	6	LGASNSPGQPNSVK	14	0	P49756	P49756	RBM25	RNA-binding protein 25	1	LGAS(0.024)NS(0.976)PGQPNSVK;LGAS(0.006)NS(0.994)PGQPNSVK;LGAS(0.003)NS(0.997)PGQPNSVK;LGAS(0.043)NS(0.951)PGQPNS(0.006)VK;LGAS(0.001)NS(0.996)PGQPNS(0.003)VK;LGAS(0.005)NS(0.995)PGQPNSVK	201.72	1.4601e-12	711749000.0	25898.8	18307.5	37065.6	27357.0	19018.4	17681.3	16917.499999999996	23238.699999999997	23291.600000000002	30100.699999999997	True	False	24760.319762347506	21332.503200707193	29286.03709139411	24958.654284482596	21519.652953167024	21097.96098550526	20711.6800210601	22421.381749179454	22208.77859982279	24649.171548253384	1.00450920688659	0.8654450377346979	1.1881144578860823	1.012555502549989	0.8730375749562215	0.8559298207732357	0.8402586667269841	0.9096200943422057	0.9009949302493487	1.0	14.589251538391522	-7.75528236843336	22.272855801217453	0.8872665794177729	1.0189595843178054	0.33335316616845423	0.0831992110571275	42.48813526446758	153695.25327664881	0.025023810880143646	0.03137477684061527	1.7567810233334983e-08	7.75528236843336	0.13169300490003255	
LGASNS(ph)PGQPNSVKR	ddPTM_K562_Methotrexat_30min_R1	3	LGASNSPGQPNSVKR	15	1	P49756	P49756	RBM25	RNA-binding protein 25	1	LGAS(0.002)NS(0.992)PGQPNS(0.005)VKR;LGAS(0.004)NS(0.757)PGQPNS(0.239)VKR;LGAS(0.008)NS(0.855)PGQPNS(0.137)VKR	137.73	9.3391e-06	95549000.0	12516.2	8222.1	17662.199999999997	14652.7	9132.9	8343.0	8626.5	11709.3	11179.7	15947.2	True	False	11966.002834474726	9580.662273195934	13955.14558824411	13368.120540784368	10334.036430823775	9955.166673382071	10561.212218216348	11297.477282105574	10659.95818717645	13059.0075484725	0.9163026202457765	0.7336439800371028	1.0686222162323835	1.0236704811728228	0.79133398096799	0.7623218408007213	0.8087300799096087	0.8651099434755307	0.8162916016097513	1.0	13.67275763942748	-7.782809105757288	24.986243454366186	0.8283762031050718	0.9306417703875453	0.16582214121993732	0.10187155031555835	417.7941719328239	488497.15280087903	0.032584540205500556	0.036981824894326505	1.6488870009357723e-08	7.782809105757288	0.10226556728247349	
LGDLYEEEMR	ddPTM_K562_Methotrexat_30min_R1	1	LGDLYEEEMR	10	0	P08670;B0YJC4	P08670	VIM	Vimentin	0		90.906	0.030906	11666000.0	1087.0	1277.1	1306.2	1243.6	1034.4	937.98	831.12	1352.9	1240.4	1187.7	False	True	1039.2167815370492	1488.1190680116422	1032.0464702791542	1134.575518813559	1170.4417308898724	1119.2313599782954	1017.5198167048018	1305.317740168981	1182.7340747402577	972.5960209516898	1.0684978749143665	1.5300484846272666	1.0611255321292512	1.1665434511066286	1.2034202337622044	1.1507669534604124	1.046189573867631	1.3420965252271146	1.2160589281281933	1.0	9.925696879063645	-6.823261884940112	24.999999538966915	1.1595580320087107	1.2993170396573535	0.1551643001808356	0.1389526152445303	108.65391130138754	43936.91789856181	0.03439705409160773	0.07160324059736595	1.502235826141118e-07	6.823261884940112	0.1397590076486428	
LGDLYEEEMRELRR	ddPTM_K562_Methotrexat_30min_R1	1	LGDLYEEEMRELRR	14	2	P08670;B0YJC4	P08670	VIM	Vimentin	0		98.40700000000001	0.013047999999999999	4830000.0	3352.5	2691.6	3873.2	5409.5	2669.1	3404.1	3531.5	2813.5	2950.7	4480.9	False	True	3205.1281141701543	3136.341150622611	3060.2682504097493	4935.257533790567	3020.133433795591	4061.8941475320507	4323.528771649107	2714.5476102930184	2813.522601044889	3669.3655891912344	0.8734829049499527	0.854736622554389	0.83400472807188	1.344989321404289	0.8230669199852771	1.10697450248541	1.1782769164197826	0.7397866318606133	0.7667599569071607	1.0	11.84131493616527	-14.124174003006747	21.998082867733373	0.9715808214070722	0.9568908654638353	0.0	0.18913009534402334	0.0	0.0	0.0	0.044039464454837265	7.51321811567075e-15	14.124174003006747	-0.014689955943236965	
LGDS(ph)SLSR	ddPTM_K562_Methotrexat_30min_R1	1	LGDSSLSR	8	0	Q14152-2;Q14152	Q14152-2	EIF3A	Eukaryotic translation initiation factor 3 subunit A	1	LGDS(0.739)S(0.261)LSR	88.177	0.022795	13652000.0	2801.5	2133.2	2621.6	3025.6	2400.9	2101.3	2208.8	2458.5	2744.8	3470.7	True	False	2678.349414421383	2485.67504179973	2071.3619862837454	2760.350345547046	2716.6604328050025	2507.3464857698364	2704.179626452936	2372.033161508934	2617.194847103401	2842.1225982293754	0.9423764534612187	0.8745840321414319	0.7288081054540684	0.9712284569521128	0.9558561740079281	0.8822091233263116	0.9514648059649584	0.8345991699959374	0.9208592369428037	1.0	11.472753072896088														
LGDSS(ph)LSR	ddPTM_K562_Methotrexat_30min_R1	1	LGDSSLSR	8	0	Q14152-2;Q14152	Q14152-2	EIF3A	Eukaryotic translation initiation factor 3 subunit A	1	LGDS(0.223)S(0.777)LSR	99.01299999999999	0.015701	8065700.0	3780.3	3333.4	3979.1	4308.0	3717.8	3580.5	3790.4	3688.2	3798.9	4688.1	True	False	3614.1225384034133	3884.1876918878793	3143.9412876188803	3930.3243286014895	4206.75586533485	4272.380950982203	4640.493687118441	3558.4839155083387	3622.2899681802355	3839.0396613821836	0.9414131806864968	1.0117602407080735	0.8189395174122676	1.0237779953506498	1.0957833824046184	1.1128775235012816	1.208764195326835	0.9269203314839328	0.9435406475785377	1.0	11.906529749505408	-7.503638640525506	23.897567688937247	1.0559900871468755	0.9309013549071515	0.27630809426275926	0.08932104680017723	592.5100258835482	735938.9100285509	0.026944995428053585	0.039223886236919824	3.13589389390563e-08	7.503638640525506	-0.12508873223972394	
LGDVYVNDAFGTAHR	ddPTM_K562_Methotrexat_30min_R1	4	LGDVYVNDAFGTAHR	15	0	P00558-2;P07205;P00558	P00558-2	PGK1;PGK2	Phosphoglycerate kinase 1;Phosphoglycerate kinase 2	0	;;;	178.67	7.7082e-06	48420200.0	17232.2	13456.7	17564.5	17397.8	14846.0	14295.399999999998	13829.699999999999	18230.399999999998	17854.1	21313.6	False	True	16474.693121253673	15680.190950209284	13877.951483094623	15872.56188582706	16798.50921963558	17057.78373039267	16931.362269085566	17589.226498910903	17024.066787987776	17453.500506993303	0.9439191361442113	0.8983980573940749	0.7951385727770758	0.9094199687602617	0.9624722108269753	0.9773273690030218	0.9700840391474177	1.0077764338370527	0.9753955535261559	1.0	14.09122879464402	-7.745150352811533	3.0483477177211546	0.9838982002079303	0.8776240206017377	0.6344891029136164	0.0361515985160831	0.16589704277190895	3.1752491686667708	0.012009298732978475	0.015124646515887782	1.798248253550569e-08	7.745150352811533	-0.10627417960619256	
LGFS(ph)FVR	ddPTM_K562_Methotrexat_30min_R1	2	LGFSFVR	7	0	A0A087X2D8;O60271-4;O60271-2;O60271;E9PFH7;A0A087WYG2;A0A669KB35;O60271-9;Q9UPT6	A0A087X2D8	SPAG9;MAPK8IP3	C-Jun-amino-terminal kinase-interacting protein 4;C-Jun-amino-terminal kinase-interacting protein 3	1	LGFS(1)FVR;LGFS(1)FVR	90.601	0.018096	7789300.0	4321.7	4536.8	6112.9	4646.9	4101.3	4458.4	3769.4	4054.6	4017.2000000000003	4210.9	True	False	4131.723242657465	5286.429087585326	4829.885827721205	4239.513491777685	4640.692837295662	5319.922701259332	4614.783902549666	3911.997419830844	3830.441248828251	3448.2652055447243	1.1982034432890363	1.5330691731844988	1.4006712186623202	1.2294627121372954	1.3458050818810408	1.5427823511674883	1.3382914675846884	1.1344827577474175	1.1108313950646826	1.0	11.751655020809094	-9.318146494986829	2.877830543702848	1.069336302425934	1.3801729092116106	0.6102168606980194	0.10681514363136041	0.19289800811272828	3.116541081566774	0.07028950320263558	0.030070598904305256	4.806771804326708e-10	9.318146494986829	0.3108366067856767	
LGGAVPFAPPEVS(ph)PEQAK	ddPTM_K562_Methotrexat_30min_R1	1	LGGAVPFAPPEVSPEQAK	18	0	A0A096LNZ0;A0A096LP25;Q6ZSR9	A0A096LNZ0	AAK1	Uncharacterized protein FLJ45252	1	LGGAVPFAPPEVS(1)PEQAK	207.53	6.601499999999999e-22	7816600.0	2618.9	1695.1	3599.0	2791.8	1917.2	1511.5	1708.4	2102.7	2100.2	3192.5	True	False	2503.776291782317	1975.186463226479	2843.619083245041	2547.0472285491264	2169.345404545692	1803.5759830776708	2091.5521884426817	2028.7468491782945	2002.5621604075209	2614.307314042496	0.9577207233187651	0.7555295632678524	1.0877141596823066	0.9742723110125239	0.8297973971511556	0.6898867525596317	0.8000406750989503	0.7760169733225621	0.7660010549069554	1.0	11.352213025789842	-7.889631302535233	5.173578952021896	0.7888875817859105	0.939789379876774	0.26862523433517194	0.10618780341989303	0.2603067096942925	10.820022229109199	0.03278338219204654	0.037452755720335226	1.2893436849069519e-08	7.889631302535233	0.15090179809086357	
LGGEIVSADS(ph)MQR	ddPTM_K562_Methotrexat_30min_R1	1	LGGEIVSADSMQR	13	0	A0A3B3ITK2	A0A3B3ITK2			1	LGGEIVS(0.007)ADS(0.993)MQR	85.86200000000001	0.025113	58809000.0	3544.7	4171.9	5289.5	4394.3	3785.9	4177.3	3749.0	3276.7	2935.2	2853.0	True	False	3388.879232303937	4861.235564824817	4179.306235294428	4009.0585415908863	4283.812208986822	4984.504104604932	4589.808683254285	3161.456603748759	2798.7431926617246	2336.294053864757	1.4505362570683116	2.0807464526065274	1.7888613928460388	1.7159905599036216	1.8335929083500557	2.1335088776001627	1.9645680626810254	1.353192933277811	1.197941324223281	1.0	11.190006152781475	-9.444985144519816	3.0655645119545945	1.117244202922183	1.8631069771950122	0.7321422978617196	0.18876886229956777	0.13747500667622747	2.4532455168707457	0.13365357017169388	0.051635616732589776	3.589342121412746e-10	9.444985144519816	0.7458627742728292	
LGGLLPPGGEGGPEATVVS(ph)DEDEAAEMEDEAVR	ddPTM_K562_Methotrexat_30min_R1	1	LGGLLPPGGEGGPEATVVSDEDEAAEMEDEAVR	33	0	P51178;P51178-2	P51178	PLCD1	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1	1	LGGLLPPGGEGGPEAT(0.099)VVS(0.901)DEDEAAEMEDEAVR	87.61	9.617000000000001e-06	9208800.0	1083.0	1035.2	1606.8	1206.4	740.6	903.61	1191.6	1291.7	1281.2	1315.1	True	False	1035.3926167475843	1206.2492046086081	1269.554638221209	1100.636785056833	838.0018811843001	1078.2198439092383	1458.8466329596704	1246.27017885747	1221.6372916456132	1076.9226464204496	0.9614363856021547	1.1200889948948731	1.1788726353197632	1.0220202803935883	0.7781449150221783	1.001204541006822	1.354643843556161	1.1572513429816984	1.1343779385698465	1.0	10.072698911857621														
LGGLRPES(ph)PESLTSVSR	ddPTM_K562_Methotrexat_30min_R1	5	LGGLRPESPESLTSVSR	17	1	Q9H6F5;H0YG79	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	1	LGGLRPES(0.988)PES(0.012)LTSVSR;LGGLRPES(0.61)PES(0.102)LT(0.004)S(0.031)VS(0.253)R;LGGLRPES(0.542)PES(0.113)LT(0.113)S(0.04)VS(0.192)R;LGGLRPES(0.741)PES(0.107)LT(0.042)S(0.042)VS(0.068)R;LGGLRPES(0.938)PES(0.06)LT(0.002)SVSR	178.22	3.9952000000000003e-10	2463736000.0	8818.779999999999	9055.2	10551.22	9410.05	7480.59	7408.099999999999	7220.65	8147.210000000001	8553.19	9589.74	True	False	8431.11699050902	10551.41788791718	8336.66311295269	8585.085526545137	8464.418704251235	8839.610479813224	8840.064568882379	7860.668006417415	8155.5540637920285	7852.945159519455	1.0736248400116095	1.3436255664063306	1.061597011516993	1.0932313103114149	1.0778655055282722	1.1256427111422926	1.125700535189186	1.0009834331885787	1.0385344476658858	1.0	12.939018106840857	-7.720989364634171	0.2690945927752553	0.9867877278794221	1.2490325000723241	0.3030222386990604	0.07769487865761611	4.834636612552669	0.5699832940730484	0.11854457053733135	0.41365175119369485	1.901124835685315e-08	7.720989364634171	0.262244772192902	
LGGLRPESPES(ph)LTSVSR	ddPTM_K562_Methotrexat_30min_R1	2	LGGLRPESPESLTSVSR	17	1	Q9H6F5;H0YG79	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	1	LGGLRPES(0.116)PES(0.883)LT(0.001)SVSR;LGGLRPES(0.255)PES(0.287)LT(0.287)S(0.017)VS(0.154)R	168.85	1.2988e-07	3276980000.0	7138.3	6508.3	9017.8	7091.3	6644.400000000001	5893.0	5831.799999999999	6828.5	6907.799999999999	8092.9	True	False	6824.5088791590815	7583.685952815107	7125.087015528518	6469.616738953517	7518.255062572186	7031.738847685551	7139.729602294567	6588.337784569356	6586.657885755206	6627.1973881956155	1.0297729914178984	1.1443277615848884	1.0751282326703813	0.9762221282977354	1.1344546755109068	1.0610426151197045	1.0773377016069983	0.9941363443172107	0.9938828587612889	1.0	12.694183174761509	-9.263036085039904	24.21469734767247	0.9955071915366398	1.072539760891082	0.36891241181257206	0.0450329488577907	99.8219604837225	1513790.463814296	0.022979578816703178	0.011942989605516067	5.457125165684299e-10	9.263036085039904	0.07703256935444225	
LGHPEALSAGTGS(ph)PQPPSFTYAQQR	ddPTM_K562_Methotrexat_30min_R1	4	LGHPEALSAGTGSPQPPSFTYAQQR	25	0	Q15942-2;Q15942;H0Y2Y8;H7C3D3	Q15942-2	ZYX	Zyxin	1	LGHPEALSAGT(0.038)GS(0.962)PQPPSFTYAQQR;LGHPEALSAGT(0.006)GS(0.994)PQPPSFTYAQQR;LGHPEALSAGT(0.002)GS(0.998)PQPPSFTYAQQR;LGHPEALS(0.024)AGT(0.017)GS(0.942)PQPPS(0.016)FT(0.001)YAQQR	147.08	2.4431e-22	452415000.0	4088.93	3603.26	4804.870000000001	4252.21	3537.2000000000003	4005.2	3742.6	4360.88	4455.59	5251.68	True	False	3909.185533146539	4198.6374700521765	3796.3934494336227	3879.4253512819278	4002.4037997908504	4779.14821529784	4581.973320338084	4207.505378629687	4248.450593414981	4300.549862180324	0.9089966768027732	0.9763024740105025	0.8827693134823692	0.9020765891818094	0.9306725716607974	1.1112877116776114	1.0654389478500503	0.9783645146475606	0.9878854401332462	1.0	12.070305417203455	-8.116688678755477	8.11828260252744	1.0293803328177358	0.9189275221388478	0.6186950076475382	0.04264742590553397	0.21257679490913567	13.552355635198337	0.01504530844855852	0.015062522938457178	7.643835307150385e-09	8.116688678755477	-0.11045281067888801	
LGHVVMGNNAVS(ph)PYQQVIEK	ddPTM_K562_Methotrexat_30min_R1	1	LGHVVMGNNAVSPYQQVIEK	20	0	P60228;H0YAW4;E5RGA2	P60228	EIF3E	Eukaryotic translation initiation factor 3 subunit E	1	LGHVVMGNNAVS(1)PYQQVIEK	143.91	2.502e-10	47726000.0	6270.7	4200.4	7550.9	6271.8	4529.1	4240.3	4209.6	5493.5	5419.3	7276.8	True	False	5995.047536324175	4894.444705407644	5966.0692791539295	5721.9610315976815	5124.756035743737	5059.677962979986	5153.709958129428	5300.290491254556	5167.357925862527	5958.901006366301	1.0060659725542103	0.8213670104904536	1.0012029521517425	0.9602376386995722	0.8600169780079598	0.8490958244774307	0.8648759146398585	0.8894744996756775	0.8671662644406889	1.0	12.54083056520464	-7.760548726757869	24.999911351871933	0.8797667317446697	0.9420850530595336	0.1664012455919892	0.062251422824505125	40.04827269087502	1124098.181218641	0.01800205462700486	0.02190954184990444	1.735606521223293e-08	7.760548726757869	0.06231832131486392	
LGIAVIHGEAQDAESDLVDGRHS(ph)PPMVR	ddPTM_K562_Methotrexat_30min_R1	8	LGIAVIHGEAQDAESDLVDGRHSPPMVR	28	1	C9K0K7;I3L0S1;E7EPA1;O60256-4;O60256-3;O60256-2;O60256	C9K0K7	PRPSAP2	Phosphoribosyl pyrophosphate synthase-associated protein 2	1	LGIAVIHGEAQDAES(0.063)DLVDGRHS(0.937)PPMVR;LGIAVIHGEAQDAES(0.036)DLVDGRHS(0.964)PPMVR;LGIAVIHGEAQDAES(0.027)DLVDGRHS(0.973)PPMVR;LGIAVIHGEAQDAES(0.004)DLVDGRHS(0.996)PPMVR;LGIAVIHGEAQDAES(0.244)DLVDGRHS(0.756)PPMVR;LGIAVIHGEAQDAES(0.279)DLVDGRHS(0.721)PPMVR;LGIAVIHGEAQDAES(0.022)DLVDGRHS(0.978)PPMVR;LGIAVIHGEAQDAES(0.373)DLVDGRHS(0.627)PPMVR	74.308	6.4993e-05	878641000.0	11240.830000000002	8958.039999999999	10448.81	11684.029999999999	9166.25	8822.099999999999	8517.759999999998	12692.840000000002	12768.199999999999	14500.2	True	False	10746.696572589806	10438.203849354803	8255.74757243724	10659.709230526852	10371.77254038021	10526.84596778665	10428.084505168305	12246.425622829807	12174.609168895966	11874.073270189181	0.9050556054399845	0.8790752433337897	0.6952751077563215	0.8977297838719686	0.873480591232276	0.8865404253665123	0.878223021526139	1.0313584348157465	1.025310261429943	1.0	13.535527300094122	-9.199053866910909	3.7725863849532932	1.0228479000233055	0.854459512912014	0.6217629116591284	0.05709269677956162	0.15824518722925787	4.496166029307977	0.03165009815849434	0.01661373666201745	6.323334162090662e-10	9.199053866910909	-0.16838838711129145	
LGIHEDSQNR	ddPTM_K562_Methotrexat_30min_R1	3	LGIHEDSQNR	10	0	P07900;P07900-2	P07900	HSP90AA1	Heat shock protein HSP 90-alpha	0	;;	183.72	1.0787999999999999e-05	33797800.0	16278.6	13443.2	17631.5	17179.9	14157.5	13016.0	13096.699999999999	15138.0	15758.7	18343.7	False	True	15563.012235445278	15664.460304670038	13930.889098703787	15673.764840515492	16019.459401656399	15531.157787455477	16033.968360089711	14605.587959699913	15026.081476627949	15021.478175912705	1.036050650487975	1.042804184863003	0.9273980187277638	1.0434236003250827	1.0664369520799877	1.0339300570539094	1.0674028329515906	0.9723136291021158	1.0003064479181967	1.0	13.874739166578008	-9.28137805776602	24.871690098282503	0.9897325299546141	1.0294742994673247	0.19204017467385726	0.037656869085423365	1460.4923159963375	1821819.510491046	0.021643862033021984	0.01041587212088325	5.23144835408874e-10	9.28137805776602	0.03974176951271058	
LGIHEDSTNR	ddPTM_K562_Methotrexat_30min_R1	5	LGIHEDSTNR	10	0	P08238	P08238	HSP90AB1	Heat shock protein HSP 90-beta	0	;;;;	198.61	1.2287e-08	108948200.0	28547.230000000003	25289.659999999996	33102.08	31928.92	26683.19	23451.61	24851.65	29385.5	29314.840000000004	31864.750000000004	False	True	27292.327950688064	29468.346464279486	26154.405774688523	29129.761156446304	30192.497186062774	27983.301727095015	30425.26512755304	28351.99530914005	27951.999486906414	26093.734999259374	1.0459341275391472	1.1293265017490173	1.002325108898012	1.1163507699174957	1.157078401651574	1.0724145749119194	1.1659988548368645	1.0865441574364412	1.0712149674126676	1.0	14.671415842648639	-6.222114755513288	20.94076585962246	1.0938897366166573	1.0459330649633227	0.04760648554152658	0.054019853131230394	6544.944597445868	3484670.042985831	0.012973721022502376	2.245270676481653	5.99632611796592e-07	6.222114755513288	-0.047956671653334615	
LGIHEDSTNRR	ddPTM_K562_Methotrexat_30min_R1	3	LGIHEDSTNRR	11	1	P08238	P08238	HSP90AB1	Heat shock protein HSP 90-beta	0	;;	100.25	0.0025011	21667400.0	15457.9	12689.9	17567.6	16500.5	13241.5	13434.7	13025.400000000001	16117.3	16407.2	17337.6	False	True	14778.389224766834	14786.690283580718	13880.400835458619	15053.926783678933	14982.989346073331	16030.765636687782	15946.677520101448	15550.445423627401	15644.432853175078	14197.592635221034	1.0409081035403829	1.0414927842695152	0.977658761741372	1.0603154471648615	1.0553190059069524	1.129118580069628	1.1231958776265583	1.0952874774734869	1.1019074328393363	1.0	13.793358704514407	-7.815030164963989	2.222064711612471	1.0969751627420203	1.023557562698392	0.3379535747163729	0.038867282669412515	0.29397563093226153	2.977321171469834	0.012727266180345136	0.015735291993518925	1.530981120026412e-08	7.815030164963989	-0.0734176000436284	
LGLHVTPSNVDQVS(ph)TPPAAK	ddPTM_K562_Methotrexat_30min_R1	1	LGLHVTPSNVDQVSTPPAAK	20	0	Q9NRL2;Q9NRL2-2	Q9NRL2	BAZ1A	Bromodomain adjacent to zinc finger domain protein 1A	1	LGLHVTPSNVDQVS(0.829)T(0.171)PPAAK	102.19	0.00018630000000000003	10894000.0	2520.1	1499.0	3342.3	2612.9	1849.8	1529.9	1371.7	2173.9	2389.5	3439.2	True	False	2409.319421482537	1746.6842713565518	2640.796905231981	2383.831113788959	2093.0811231632697	1825.531522666576	1679.3386425233132	2097.442704821751	2278.4126665526023	2816.3275534706167	0.855482672288415	0.6201992624061352	0.9376739228992288	0.8464324793653055	0.7431952013479128	0.648195740022121	0.5962866927370826	0.7447438783308533	0.809001305173068	1.0	11.459599421295694	-10.150844787633469	3.013060873264764	0.9998490208532447	0.7461528871134648	0.3474310093920716	0.10328371728081644	0.7815793422496853	12.81736987188083	0.10535532450119568	0.028105522661985998	7.065700299820844e-11	10.150844787633469	-0.25369613373977984	
LGLHVTPSNVDQVST(ph)PPAAK	ddPTM_K562_Methotrexat_30min_R1	1	LGLHVTPSNVDQVSTPPAAK	20	0	Q9NRL2;Q9NRL2-2	Q9NRL2	BAZ1A	Bromodomain adjacent to zinc finger domain protein 1A	1	LGLHVTPSNVDQVS(0.051)T(0.949)PPAAK	104.76	0.00047886	16028000.0	1901.6	1216.1	2435.9	1786.9	1296.6	1537.2	1248.0	1795.3	2092.8	2310.5	True	False	1818.0079409115478	1417.039854834358	1924.637878543095	1630.2452513412259	1467.1256267128852	1834.242144351304	1527.895768658668	1732.1582814142735	1995.5061847923334	1892.0460607972389	0.9608687539802842	0.7489457493636648	1.0172256999558051	0.8616308477470682	0.7754175001927237	0.96944899088684	0.8075362436022666	0.9154947743103069	1.0546816095753506	1.0	10.88573149536629	-9.639820054419749	4.805651658935756	1.0253443869958658	0.8758506046440967	0.33583796039578884	0.08293359607038366	0.2249302884828456	8.234593315102732	0.05763910616306843	0.02006900859539573	2.2918170475679303e-10	9.639820054419749	-0.14949378235176913	
LGLPLLTDCAQPSRPHGSPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	LGLPLLTDCAQPSRPHGSPSR	21	1	U3KQ90;P55199	U3KQ90	ELL	RNA polymerase II elongation factor ELL	1	LGLPLLTDCAQPS(0.019)RPHGS(0.269)PS(0.712)R;LGLPLLTDCAQPSRPHGS(0.11)PS(0.89)R	113.51	1.9507e-05	523150000.0	1956.96	1778.21	2285.25	2406.2599999999998	1951.4299999999998	1580.75	1800.21	1815.51	2017.29	2064.44	True	False	1870.9343815977415	2072.0289780980206	1805.6072547890328	2195.3069217596617	2208.0772495267042	1886.2075654978673	2203.952918026458	1751.6574842591356	1923.5066282108796	1690.5499111673885	1.1067016532542306	1.2256538327621493	1.0680591225740226	1.2985756334420908	1.3061295824161403	1.1157361004475579	1.3036899434128777	1.0361465654980573	1.137799372561929	1.0	10.723276895114447	-9.281385648548666	24.836122247221862	1.0652297087301101	1.2033766148111593	0.3686765722597235	0.08711194329305903	893.6950044425479	1112778.3493910134	0.046524820560631744	0.02240224433841522	5.231356917420775e-10	9.281385648548666	0.13814690608104918	
LGMLKPHCT(ph)VSFGLLS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LGMLKPHCTVSFGLLSR	17	1	A2RRE0;Q9Y4E6-2;Q9Y4E6	A2RRE0	WDR7	WD repeat-containing protein 7	2	LGMLKPHCT(0.964)VS(0.037)FGLLS(0.999)R	65.149	0.018381	7227300.0	4532.4	3964.0	4395.4	5309.3	4364.9	4033.8	4042.8	4858.6	4837.0	5507.7	True	False	4333.161122942525	4618.983623520594	3472.865606694985	4843.84191222003	4938.960857657775	4813.274760528422	4949.500812126013	4687.720284119305	4612.128925764775	4510.202159295801	0.9607465408200422	1.0241189774610409	0.7700022047874724	1.073974456385858	1.0950641863088724	1.0671971212217106	1.0974011002865562	1.0393592390216098	1.0225991569488513	1.0	12.138976385033445														
LGMLS(ph)PEGTCK	ddPTM_K562_Methotrexat_30min_R1	1	LGMLSPEGTCK	11	0	A0A0U1RQF0;P49327	A0A0U1RQF0	FASN	Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase	1	LGMLS(0.98)PEGT(0.02)CK	77.124	0.031066000000000003	22478000.0	6403.1	4546.5	9014.8	6599.3	4115.1	4440.3	4381.9	5876.4	5693.9	7179.5	True	False	6121.627390855456	5297.731847713521	7122.716674531093	6020.74961507424	4656.3077791810865	5298.325132424598	5364.652619138957	5669.723681224775	5429.191831799059	5879.22297922258	1.0412306885602984	0.9010938803368961	1.2115064694268396	1.0240723368295133	0.7919937372058643	0.9011947924324526	0.9124764680805378	0.9643661588039466	0.9234539752933424	1.0	12.521409780183404	-7.54862228785222	24.722143231010836	0.9124798860495404	1.0498471639824738	0.35464571950644763	0.08570423897033516	212.16471548518066	203745.4032249159	0.025404269743698023	0.03279787749440233	2.827337882281504e-08	7.54862228785222	0.13736727793293335	
LGNAGDVCVPQAS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	LGNAGDVCVPQASPR	15	0	Q9H0W5	Q9H0W5	CCDC8	Coiled-coil domain-containing protein 8	1	LGNAGDVCVPQAS(1)PR;LGNAGDVCVPQAS(1)PR	166.36	6.614300000000001e-09	156225000.0	2512.01	2170.6499999999996	2958.1	2612.06	2216.8	2572.98	2129.3999999999996	2671.3999999999996	2976.87	2977.1000000000004	True	False	2401.5850481958455	2529.3130177585704	2337.23523482833	2383.0647552847745	2508.3480559132536	3070.1719701880165	2606.97215527385	2577.445347836065	2838.475963456976	2437.9183413111714	0.9850965914240651	1.0374888177748582	0.9587011981587982	0.9774998263490255	1.0288892837010297	1.2593415940817787	1.069343509623771	1.0572320262580464	1.1643031332749132	1.0	11.251434087995762	-8.015023214484211	24.762478450410704	1.1147481817546294	0.9924336331881811	0.4192439299497084	0.06733831251150076	580.0270256415042	956047.4170929904	0.02131152985116642	0.02204483099134141	9.659992417380396e-09	8.015023214484211	-0.1223145485664483	
LGNAGDVCVPQAS(ph)PRR	ddPTM_K562_Methotrexat_30min_R1	2	LGNAGDVCVPQASPRR	16	1	Q9H0W5	Q9H0W5	CCDC8	Coiled-coil domain-containing protein 8	1	LGNAGDVCVPQAS(1)PRR;LGNAGDVCVPQAS(1)PRR	105.36	0.0009449999999999999	86610000.0	6813.799999999999	5958.6	7994.9	6553.5	6567.0	5835.1	5487.6	6795.7	6898.200000000001	8081.799999999999	True	False	6514.273510613748	6943.157371117512	6316.879746772933	5978.964829965151	7430.675605910473	6962.650492131333	6718.333990457773	6556.691379160572	6577.504187659822	6618.107705756818	0.9843105915225965	1.0491151972455732	0.9544842767182741	0.9034251323477701	1.1227794917037743	1.0520606193934878	1.0151442510694972	0.9907199566210108	0.9938647843307722	1.0	12.692203055505168	-7.747267745846623	24.999982531454968	1.0290816309436	0.9769718325214365	0.23702907749643765	0.04922652986850544	422.1379159797454	744684.3960971101	0.015660748149608102	0.020122654084281228	1.789502272144635e-08	7.747267745846623	-0.052109798422163456	
LGNSGAS(ph)PSSAGK	ddPTM_K562_Methotrexat_30min_R1	2	LGNSGASPSSAGK	13	0	Q8IWI9-3;Q8IWI9	Q8IWI9-3	MGA	MAX gene-associated protein	1	LGNS(0.001)GAS(0.983)PS(0.015)S(0.001)AGK;LGNS(0.028)GAS(0.891)PS(0.08)S(0.001)AGK	118.19	0.0013587999999999999	15225000.0	2163.3	1729.92	3194.2	2380.2	1902.5900000000001	1723.0700000000002	1271.22	1989.27	2144.55	2644.3	True	False	2068.203922262281	2015.7598763876765	2523.781071325732	2171.5315614989	2152.813933462647	2056.028891274655	1556.323444738999	1919.30624657103	2044.8503385877293	2165.3916462091065	0.9551177154871872	0.9308985189430344	1.165507900496452	1.0028354756519646	0.9941914836660246	0.9494951617062392	0.718726077780716	0.8863552466045154	0.9443327917920041	1.0	11.08041226801756	-8.52742942149284	24.97762737458227	0.8716299122166734	1.0094291046833053	0.28997687326953736	0.08894607221684146	151.4508605652143	831265.7743960501	0.03446903507166032	0.02680352489290646	2.9687291613996263e-09	8.52742942149284	0.13779919246663186	
LGPELSPSPT(ph)SPTATSTTPSR	ddPTM_K562_Methotrexat_30min_R1	1	LGPELSPSPTSPTATSTTPSR	21	0	M0QY76;P26651	M0QY76	ZFP36	Tristetraprolin	1	LGPELS(0.009)PS(0.003)PT(0.476)S(0.372)PT(0.096)AT(0.011)S(0.011)T(0.003)T(0.012)PS(0.008)R	82.709	0.010922	0.0	1394.7	1147.2	1471.2	1379.3	1102.0	1080.9	1364.4	1334.1	1113.0	1235.5	True	False	1333.3906579666266	1336.7553009341134	1162.4152251375679	1258.378910501401	1246.9323157778808	1289.768627263416	1670.4014316970233	1287.1789468249208	1061.2568729328505	1011.7389777602199	1.3179196287549153	1.3212452325336048	1.1489279850727052	1.2437782255727565	1.2324644430901834	1.2748037345745995	1.651020142957174	1.2722441016105437	1.0489433502722738	1.0	9.98262141652854	-9.766228521627697	4.496608694262158	1.0107007289367358	1.3102180372347347	0.4574368084047663	0.12436988733490381	0.18572046109167173	8.813559837347116	0.11690438412206862	0.03416616197024875	1.7130556767027674e-10	9.766228521627697	0.29951730829799894	
LGPGRPLPTFPTSECT(ph)SDVEPDTR	ddPTM_K562_Methotrexat_30min_R1	3	LGPGRPLPTFPTSECTSDVEPDTR	24	1	Q8TDD1-2;Q8TDD1;H0YHZ9	Q8TDD1-2	DDX54	ATP-dependent RNA helicase DDX54	1	LGPGRPLPTFPT(0.008)S(0.217)ECT(0.387)S(0.387)DVEPDT(0.001)R;LGPGRPLPTFPT(0.001)S(0.002)ECT(0.499)S(0.499)DVEPDTR;LGPGRPLPTFPTS(0.003)ECT(0.498)S(0.498)DVEPDTR	102.24	6.9829e-06	136565000.0	1675.88	1433.5299999999997	2207.66	2006.9299999999998	1352.05	1625.04	1576.65	1727.32	2116.7	2052.04	True	False	1602.2103218420511	1670.3964666562754	1744.3023354589473	1830.9855628598389	1529.868273636555	1939.0559811713765	1930.2538971600072	1666.5691765457034	2018.2950790089528	1680.3956713258442	0.9534720596952596	0.9940494939137284	1.0380307240869528	1.089615734022439	0.910421455935719	1.153928217180807	1.148690115130458	0.9917718814585903	1.2010832409586627	1.0	10.71458525924306	-8.277360473875595	24.980987551910474	1.1016801454827396	1.0043591244118881	0.3101755482760412	0.07560555221508689	1064.1273422011996	1669664.0266305422	0.025768272476103325	0.0227941144723709	5.280068126928713e-09	8.277360473875595	-0.0973210210708515	
LGPGRPLPTFPTSECTS(ph)DVEPDTR	ddPTM_K562_Methotrexat_30min_R1	2	LGPGRPLPTFPTSECTSDVEPDTR	24	1	Q8TDD1-2;Q8TDD1;H0YHZ9	Q8TDD1-2	DDX54	ATP-dependent RNA helicase DDX54	1	LGPGRPLPT(0.001)FPT(0.075)S(0.256)ECT(0.333)S(0.335)DVEPDT(0.001)R;LGPGRPLPTFPTS(0.001)ECT(0.357)S(0.641)DVEPDTR	124.76	5.739600000000001e-10	92453000.0	1408.8600000000001	970.0999999999999	1679.63	1440.06	997.2	999.14	986.36	1288.44	1136.5500000000002	1615.25	True	False	1346.9282013213322	1130.392536119407	1327.0986165020477	1313.8121756373857	1128.3492788509104	1192.2096643944587	1207.5763384408356	1243.1248349052564	1083.712038573073	1322.7125729074824	1.0183075513984274	0.8546017927648992	1.0033159460977408	0.9932711025415503	0.853057045016713	0.9013369108406051	0.912954456754302	0.9398299073945579	0.8193103027598375	1.0	10.369283880903133	-7.751206273479853	24.999762333223543	0.901679353571491	0.9618862049328878	0.19829666687116265	0.06147618117856123	358.9110750194671	876825.4319931254	0.017527392675759246	0.022367221883502018	1.7733470079677628e-08	7.751206273479853	0.06020685136139681	
LGS(ph)FGSITR	ddPTM_K562_Methotrexat_30min_R1	4	LGSFGSITR	9	0	Q14315-2;Q14315	Q14315-2	FLNC	Filamin-C	1	LGS(1)FGSITR;LGS(0.999)FGSITR;LGS(0.876)FGS(0.123)IT(0.001)R;LGS(0.988)FGS(0.004)IT(0.008)R	125.68	0.0026699000000000002	502889000.0	9355.4	7338.1	10913.2	9401.2	7446.799999999999	7797.5	7636.4	9505.599999999999	9267.7	11074.2	True	False	8944.14781783966	8550.596298626762	8622.668457702077	8577.011392304632	8426.184726982505	9304.256518721893	9349.057089571357	9171.28266017463	8836.846649847059	9068.555068807951	0.986281469316297	0.9428840905468225	0.9508315704406385	0.9457969133148869	0.9291650834172103	1.0259910700354742	1.0309312805220996	1.0113278896789213	0.974449246081344	1.0	13.146656983031095	-8.26474835639891	24.998086623767943	1.0106473530606777	0.9502438858992568	0.67978347420555	0.01971880243695364	172.8736638396143	1305990.514303179	0.007004146399529988	0.006437409298106554	5.435651986821841e-09	8.26474835639891	-0.060403467161420865	
LGS(ph)PDYGNSALLSLPGYRPTTR	ddPTM_K562_Methotrexat_30min_R1	1	LGSPDYGNSALLSLPGYRPTTR	22	1	A0A087WY61;Q14980-5;Q14980-2;Q14980;H0YFY6	A0A087WY61	NUMA1	Nuclear mitotic apparatus protein 1	1	LGS(0.773)PDY(0.215)GNS(0.012)ALLSLPGYRPTTR	72.271	0.0030723000000000005	16483000.0	864.15	803.8	1093.9	821.05	908.35	794.68	869.39	1019.5	1088.2	1417.9	True	False	826.1630007039942	936.6142877360888	864.3053390279943	749.0698212623614	1027.8139464944077	948.2406630712294	1064.372838392755	983.6436071418989	1037.6098195197906	1161.1045702680826	0.7115319514359028	0.806657997668408	0.7443819972463276	0.6451355376970154	0.885203600789462	0.8166712002970534	0.916689905153854	0.847161945900178	0.8936402853708698	1.0	10.181282193311342	-7.784558340230104	24.8908136029403	0.8829312563978032	0.7338687570417557	0.6557091736450664	0.05866494053080441	146.49841487366118	157725.21805262467	0.017760180156677494	0.02015086748261878	1.642259034708218e-08	7.784558340230104	-0.14906249935604754	
LGS(ph)PLAVDEALRR	ddPTM_K562_Methotrexat_30min_R1	1	LGSPLAVDEALRR	13	1	Q7RTP6	Q7RTP6	MICAL3	Protein-methionine sulfoxide oxidase MICAL3	1	LGS(1)PLAVDEALRR	84.62	0.015905000000000002	0.0	1914.2	1667.3	1943.0	2060.6	1872.5	1700.9	1662.4	2027.0	1756.9	2139.8	True	False	1830.054059998363	1942.7929857456834	1535.190852666051	1879.9503972878908	2118.7665710472616	2029.5748525417207	2035.2355174825082	1955.7092610854618	1675.2221024759417	1752.2614849140573	1.0443955287233408	1.1087346280632147	0.8761197263554229	1.0728709233599893	1.209161183583956	1.1582602653857137	1.1614907563766546	1.1161058311918457	0.9560343116016762	1.0	10.77500236487511	-6.215491320031226	20.293837530038708	1.0803231628318994	1.044394013708488	0.0030393003573691013	0.09746964966010303	18732.114662591077	8271207.590982872	0.02582057380149753	7.576105833830721	6.088477142934794e-07	6.215491320031226	-0.0359291491234115	
LGS(ph)PVDNLEDMDRDDLTDDSVFTR	ddPTM_K562_Methotrexat_30min_R1	3	LGSPVDNLEDMDRDDLTDDSVFTR	24	1	Q5VUA4;Q5VUA4-2	Q5VUA4	ZNF318	Zinc finger protein 318	1	LGS(0.999)PVDNLEDMDRDDLT(0.001)DDSVFTR;LGS(1)PVDNLEDMDRDDLTDDSVFTR;LGS(0.998)PVDNLEDMDRDDLT(0.001)DDSVFTR	65.171	0.0047639	69592000.0	2985.25	2258.35	3693.45	2744.67	2427.01	2405.96	2183.01	2828.2000000000003	3134.08	3439.1099999999997	True	False	2854.021984437423	2631.5039521134554	2918.24531898066	2504.0490424750815	2746.2043554592337	2870.8777189848165	2672.605562451569	2728.7306029609795	2988.377304870966	2816.2538533427337	1.013410769433963	0.9343987045024401	1.0362152955483286	0.8891418078320309	0.975126710328206	1.0193959310795961	0.9489931311693858	0.9689221018631295	1.0611178751957788	1.0	11.459561667093372	-9.74372076347334	24.957926718633736	1.0305589329235332	0.9720028204170731	0.2185545928558268	0.043336334961684944	290.1054113106852	408637.60652427224	0.02790499138146703	0.01049302930477319	1.8041773924868565e-10	9.74372076347334	-0.05855611250646009	
LGS(ph)SGLGSASSIQAAVR	ddPTM_K562_Methotrexat_30min_R1	1	LGSSGLGSASSIQAAVR	17	0	Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659	Q7Z6Z7-2	HUWE1	E3 ubiquitin-protein ligase HUWE1	1	LGS(0.582)S(0.39)GLGS(0.023)ASS(0.006)IQAAVR	147.53	7.2265e-10	35439000.0	1103.8	1317.8	1370.9	1433.1	983.22	1012.2	1060.1	1471.9	1137.6	1470.7	True	False	1055.2782736528022	1535.5440512299292	1083.1668244569685	1307.46234803129	1112.530663810461	1207.7933245591912	1297.8544105409087	1420.1324427191387	1084.713224302255	1204.3419786256218	0.8762280916729906	1.2750066662811759	0.8993847625348601	1.085623827148621	0.9237664081759115	1.0028657524148648	1.077646078584757	1.1791770675799027	0.9006687830811266	1.0	10.234029395043043	-8.752502763515828	24.638225959073058	1.0543044058147713	1.0169276457252345	0.005479880605367526	0.12510167274298142	886.6481661709331	2444493.747710841	0.046022700679297875	0.035103654014240274	1.7680609671193176e-09	8.752502763515828	-0.03737676008953672	
LGS(ph)VDSFER	ddPTM_K562_Methotrexat_30min_R1	1	LGSVDSFER	9	0	A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47	A0A3B3IRT3	TBC1D4	TBC1 domain family member 4	1	LGS(0.958)VDS(0.042)FER	93.556	0.011431	4564300.0	1118.2	876.97	1167.1	1132.5	600.64	832.08	1084.9	977.78	751.54	1050.0	True	False	1069.0452668948747	1021.874386558743	922.1416593651818	1033.2154833196819	679.634687975341	992.8676837573717	1328.2164418411762	943.3909231890201	716.6010694375144	859.8348252919716	1.2433146872503822	1.1884542897081984	1.0724637247067224	1.2016441448144832	0.7904247048199745	1.154719086215456	1.5447344103446352	1.0971769175186357	0.8334171265907732	1.0	9.74791573375324	-10.30770457110611	0.019238619639528342	7.926959211025934e-07	2.1500087790692417	0.07051327087273185	0.19653216588205583	2023.1940957312625	19.36254756622098	1121.5151397191928	1037.5595455102023	4.9237435952690125e-11	10.30770457110611	2.150007986373321	
LGSFGS(ph)ITR	ddPTM_K562_Methotrexat_30min_R1	1	LGSFGSITR	9	0	Q14315-2;Q14315	Q14315-2	FLNC	Filamin-C	1	LGS(0.006)FGS(0.976)IT(0.018)R	79.07	0.034162	15796000.0	1761.5	1445.2	2598.2	2007.8	1690.1	1770.0	1500.4	2077.7	1844.9	2297.4	True	False	1684.066569160545	1683.9947358001925	2052.8733265038245	1831.7792913106011	1912.377773952991	2112.027449584835	1836.9028936662385	2004.6261133484288	1759.1310016835707	1881.318597738835	0.8951522465065895	0.8951140640528367	1.0911885573082527	0.9736677740347779	1.0165092591183047	1.1226314629129217	0.9763911842863936	1.0655431332884273	0.9350521510805655	1.0	10.87752847188371	-6.741717957568332	24.812723659348432	1.0249176146834538	0.8951329915124825	0.46948321345563204	0.05416550961751963	178.4737230412369	224544.959442904	0.013082246618230936	0.0345055370596678	1.812516807289873e-07	6.741717957568332	-0.12978462317097128	
LGSLSARS(ph)DSEATISR	ddPTM_K562_Methotrexat_30min_R1	4	LGSLSARSDSEATISR	16	1	Q5SW79-2;H0Y2V6;Q5SW79-3;Q5SW79;H0Y4T4	Q5SW79-2	CEP170	Centrosomal protein of 170 kDa	1	LGSLS(0.045)ARS(0.741)DS(0.214)EATISR;LGS(0.011)LS(0.163)ARS(0.764)DS(0.061)EAT(0.001)ISR;LGS(0.095)LS(0.331)ARS(0.568)DS(0.005)EAT(0.001)ISR;LGSLSARS(0.52)DS(0.48)EATISR	249.89	2.0031999999999998e-78	221989000.0	6686.4	5431.14	7490.1	7903.5	5725.74	5591.86	5976.21	6729.08	6561.7	7241.4	True	False	6392.473862069295	6328.543571404549	5918.030368272767	7210.612425975368	6478.775170364828	6672.407804652796	7316.5272208458455	6492.414442321149	6256.647999212475	5929.912289399319	1.078004791655499	1.0672238074613427	0.9979962737142347	1.2159728633533937	1.0925583472704463	1.1252118883074895	1.2338339698422396	1.094858427152016	1.0550995856038627	1.0	12.533795050380336	-7.241288670954171	24.98175184783091	1.1249611714030863	1.0496898505828174	0.1705372880712308	0.06809547775611378	1321.3090705195746	1638086.4195343966	0.018158160729879278	0.031394491492042126	5.73734979857637e-08	7.241288670954171	-0.07527132082026888	
LGSLSARSDS(ph)EATISR	ddPTM_K562_Methotrexat_30min_R1	1	LGSLSARSDSEATISR	16	1	Q5SW79-2;H0Y2V6;Q5SW79-3;Q5SW79;H0Y4T4	Q5SW79-2	CEP170	Centrosomal protein of 170 kDa	1	LGSLS(0.057)ARS(0.121)DS(0.82)EAT(0.001)ISR	168.93	2.9075e-07	96550000.0	2219.4	1762.2	2131.0	2493.8	1281.3	1848.8	1733.0	1650.7	1742.9	1891.3	True	False	2121.8378334345252	2053.373597721492	1683.7322218380614	2275.1724258742797	1449.8134085355694	2206.0544343460115	2121.66936465182	1592.6439453743328	1661.8729594201836	1548.7672429282904	1.3700172463763611	1.325811613783315	1.0871434875227535	1.4690215306804644	0.9361080014801794	1.424393784423651	1.3699084703265871	1.0283300816480878	1.0730295123481832	1.0	10.59690462910942	-9.27477392154869	23.872419375912177	1.0380097813375666	1.2765265682368916	0.35828420920355974	0.15274957208289971	509.6717014683553	912440.9225478146	0.07995815083017921	0.03881489286893304	5.311608759677418e-10	9.27477392154869	0.23851678689932498	
LGSQPIRAS(ph)NPDLR	ddPTM_K562_Methotrexat_30min_R1	3	LGSQPIRASNPDLR	14	1	Q9UKE5-8;Q9UKE5-5;Q9UKE5-7;Q9UKE5-3;Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5	Q9UKE5-8	TNIK	TRAF2 and NCK-interacting protein kinase	1	LGSQPIRAS(1)NPDLR;LGSQPIRAS(1)NPDLR;LGSQPIRAS(1)NPDLR	108.32	0.0014724	251677000.0	14047.8	12422.4	13432.4	16627.600000000002	12122.7	12098.3	12199.0	13507.800000000001	14444.7	14735.9	True	False	13430.275532360776	14474.990455303296	10613.122804607026	15169.88412401443	13717.047535826243	14436.12525045886	14934.93628354735	13032.72301770608	13773.169049823124	12067.085716209487	1.1129676086016478	1.1995431867911004	0.8795100204145082	1.25712906005441	1.1367324189468873	1.1963224253116131	1.237658920702414	1.0800224117244372	1.1413832116334341	1.0	13.558789676982078	-5.93558143686794	13.620979987930063	1.1319054660087653	0.970226154352233	0.0	0.10931451837514737	3828122.65916659	22681319.85441316	0.02641323485862852	16658796.806519387	1.1598946977314208e-06	5.93558143686794	-0.16167931165653227	
LGSSGLGS(ph)ASSIQAAVR	ddPTM_K562_Methotrexat_30min_R1	1	LGSSGLGSASSIQAAVR	17	0	Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659	Q7Z6Z7-2	HUWE1	E3 ubiquitin-protein ligase HUWE1	1	LGS(0.013)S(0.147)GLGS(0.725)AS(0.044)S(0.072)IQAAVR	101.54	0.0014508	26367000.0	831.74	691.38	926.64	1078.2	1039.9	646.92	802.5	865.24	983.41	1218.6	True	False	795.1777054973556	805.6187935493615	732.1509272848531	983.6758800134929	1176.6650772934822	771.928134285548	982.4810531639273	834.8090187772997	937.6914837474341	997.8997315245682	0.796851307177427	0.8073143704714257	0.7336918772052275	0.9857462117067168	1.1791415912055618	0.7735528028514589	0.9845488701183589	0.8365660320420146	0.9396650325928544	1.0	9.962751051329702	-7.2646384445166845	24.899792395336068	0.9529779579823107	0.7820887003161812	0.38772828312085617	0.1022499041814014	289.0419746859574	2249751.1092609693	0.029120729266602273	0.045303984938045674	5.437027823663222e-08	7.2646384445166845	-0.1708892576661295	
LGSSGLGSASS(ph)IQAAVR	ddPTM_K562_Methotrexat_30min_R1	2	LGSSGLGSASSIQAAVR	17	0	Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659	Q7Z6Z7-2	HUWE1	E3 ubiquitin-protein ligase HUWE1	1	LGS(0.006)S(0.005)GLGS(0.397)AS(0.158)S(0.435)IQAAVR;LGS(0.001)S(0.012)GLGS(0.099)AS(0.303)S(0.585)IQAAVR	113.14	0.00083629	45058000.0	1947.1399999999999	1560.6999999999998	1694.0700000000002	1952.49	1530.37	1550.6100000000001	1525.83	1757.79	2021.4699999999998	2026.93	True	False	1861.546057039605	1818.5791476358702	1338.5078578363236	1781.318233136287	1731.640479216873	1850.2434370625642	1868.0362185035697	1695.9675293751434	1927.4923009232411	1659.8333356467206	1.1215258888111748	1.0956396094595229	0.8064109986770456	1.073191021580629	1.0432616588834651	1.1147163979217554	1.1254360172105635	1.0217697722731565	1.161256530718027	1.0	10.696822672073333	-7.484501967213817	24.999541890571777	1.080804509022128	1.0038309529710578	0.10813663799258622	0.09071604909312968	1168.5337382219782	761210.2582805423	0.02578592053229248	0.03823695969996595	3.277162923527889e-08	7.484501967213817	-0.07697355605107026	
LGTLS(ph)PAFSTR	ddPTM_K562_Methotrexat_30min_R1	1	LGTLSPAFSTR	11	0	Q7KZF4	Q7KZF4	SND1	Staphylococcal nuclease domain-containing protein 1	1	LGT(0.003)LS(0.993)PAFS(0.005)TR	87.21600000000001	0.020561000000000003	15200000.0	2034.2	1680.3	2446.2	2046.2	1740.0	1523.0	1725.1	2074.1	2048.6	2140.9	True	False	1944.7790036823062	1957.9410147834658	1932.7760493009225	1866.8128229304475	1968.8404985966536	1817.2981953207357	2111.9975885521385	2001.1527273889285	1953.3610331448672	1753.162264254841	1.109297777698238	1.1168053606353794	1.1024513182311872	1.0648260352123837	1.1230224028541271	1.0365829976914058	1.2046789003012313	1.1414532289397028	1.1141929489197158	1.0	10.775743815843368	-11.546885687250043	13.857591307418344	1.0000039997706147	1.112639798700966	0.393089008296304	0.041969917619353266	0.0	0.0	0.041265097428794716	0.010008256197077906	2.838666109144552e-12	11.546885687250043	0.11263579893035125	
LGVIEDHSNR	ddPTM_K562_Methotrexat_30min_R1	4	LGVIEDHSNR	10	0	P14625;Q58FF3	P14625	HSP90B1;HSP90B2P	Endoplasmin;Putative endoplasmin-like protein	0	;;;	185.33	3.1781e-07	117564000.0	26672.0	22785.7	25212.5	27056.4	23453.2	22514.600000000002	21519.2	27106.5	27442.9	31317.4	False	True	25499.53081615106	26550.64963432219	19920.740799198553	24684.407419770963	26537.70688602704	26865.22780588852	26345.428385352243	26153.149030889548	26167.085568920855	25645.51538818933	0.9943075984308155	1.0352940556051258	0.7767728781295135	0.9625233513980775	1.0347893767909455	1.0475604564477152	1.0272918280864516	1.019794246090059	1.0203376759186413	1.0	14.646418944450698	-7.657836618675231	5.0645639996540845	1.0269606457243625	0.934240646638799	0.2945887422291652	0.06334003798913367	0.26808251766568636	10.970136820335096	0.019639509579874065	0.025431699739971822	2.1986868619032498e-08	7.657836618675231	-0.0927199990855635	
LGVSVS(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	6	LGVSVSPSR	9	0	E7ERS3;Q86VM9;H3BP01	E7ERS3	ZC3H18	Zinc finger CCCH domain-containing protein 18	1	LGVS(0.005)VS(0.933)PS(0.062)R;LGVS(0.002)VS(0.992)PS(0.006)R;LGVS(0.048)VS(0.884)PS(0.068)R;LGVS(0.076)VS(0.554)PS(0.37)R;LGVS(0.001)VS(0.999)PSR;LGVS(0.013)VS(0.986)PS(0.001)R	155.53	8.2373e-11	6861200000.0	21668.6	19012.4	26148.1	23005.9	18174.7	17920.4	17797.1	20368.5	20484.7	21295.3	True	False	20716.074289249038	22153.875944455856	20659.97114492905	20989.008465964034	20564.991614853225	21383.26367657631	21788.552711855114	19652.128310024294	19532.370768164925	17438.514814323917	1.18794946185629	1.270399238716061	1.1847322644677887	1.203600690164495	1.1792857266698673	1.2262089922366666	1.2494500216244389	1.1269381893624408	1.1200707730064905	1.0	14.089989554913746	-9.92885602074585	1.2759947155137874	1.0034304204201634	1.2139206442466177	0.8064737793087353	0.03242182779470104	0.17796459051929775	0.6485417176373077	0.030376740804155294	0.00944899301033031	1.1779964434554924e-10	9.92885602074585	0.21049022382645433	
LGVSVSPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LGVSVSPSR	9	0	E7ERS3;Q86VM9;H3BP01	E7ERS3	ZC3H18	Zinc finger CCCH domain-containing protein 18	1	LGVSVS(0.017)PS(0.983)R	91.469	0.012891	11245000.0	1174.4	1274.9	1583.1	1531.9	1238.7	1126.8	1184.1	1142.8	1469.3	1415.9	True	False	1122.774782186854	1485.5555554052487	1250.8289443415465	1397.6007054281852	1401.6107618457902	1344.5381526509557	1449.6645670422495	1102.6070762547936	1400.9925637019198	1159.466789648479	0.9683544127445435	1.2812402810223062	1.078796698196734	1.2053822652841157	1.2088408002360491	1.1596176489527446	1.250285545032084	0.9509604639810995	1.2083076257204963	1.0	10.17924578244194	-10.226151546893014	0.7538767346515344	1.004989613063811	1.161832723198508	0.1273083317232785	0.10811579920527858	1.7857992950868726	2.114019761369838	0.10081015163208482	0.03682803177970845	5.94084816772622e-11	10.226151546893014	0.15684311013469698	
LGVTANDVKNVIIWGNHSSTQY(ph)PDVNHAK	ddPTM_K562_Methotrexat_30min_R1	1	LGVTANDVKNVIIWGNHSSTQYPDVNHAK	29	1	B8ZZ51;B9A041;C9JF79;A0A5K1VW95;P40925-2;P40925;P40925-3	B8ZZ51	MDH1	Malate dehydrogenase;Malate dehydrogenase, cytoplasmic	1	LGVTANDVKNVIIWGNHS(0.137)S(0.168)T(0.168)QY(0.528)PDVNHAK	41.908	0.030170999999999996	139390000.0	3853.5	3013.3	5380.1	4722.6	2980.2	2915.3	2866.7	3486.6	4013.4	5320.2	True	False	3684.104754050617	3511.1966076575686	4250.890533416684	4308.576990309515	3372.1485367343366	3478.6404654094144	3509.6304487290063	3363.974301776306	3826.8179099988315	4356.66022620795	0.8456259067182921	0.8059376736647018	0.9757222993532989	0.988963280723802	0.7740214663628853	0.79846494442768	0.8055781875337567	0.7721452046087881	0.8783833742595313	1.0	12.089006887224519	-7.779472173561353	24.99930049211828	0.8230984038218918	0.9021720036022655	0.12145283157769793	0.08103705973746408	430.18437151258735	596372.396328651	0.025341911575480276	0.028792802828869552	1.6616051379546935e-08	7.779472173561353	0.07907359978037365	
LGYLPVQTVLEGDNLETPS(ph)QSPQLFHDDTHSR	ddPTM_K562_Methotrexat_30min_R1	1	LGYLPVQTVLEGDNLETPSQSPQLFHDDTHSR	32	0	Q5JT44;Q5JT49;H0Y337	Q5JT44	UTRN		1	LGYLPVQTVLEGDNLET(0.038)PS(0.481)QS(0.481)PQLFHDDTHSR	89.96799999999999	4.69e-07	9241000.0	1825.6	1754.2	1819.2	1814.2	1779.4	1859.4	1721.7	2425.3	2228.1	2387.1	True	False	1745.348809911718	2044.051733698241	1437.374780838949	1655.1519027272107	2013.4222891970605	2218.7027343265777	2107.8350520029067	2340.0008243268753	2124.516117324062	1954.7730585280617	0.8928651857039407	1.0456721432601521	0.7353154242473998	0.8467233040205369	1.0300030893167524	1.1350180649600594	1.0783016692434364	1.1970703269713001	1.086835174065585	1.0	10.932785410690492	-7.927065782631402	3.9678177201359035	1.1086786430142188	0.8825138775934417	0.5973314420647942	0.08478590576796356	0.15490774973505136	4.819534371414698	0.027875827171859238	0.0316118346282915	1.182862373865481e-08	7.927065782631402	-0.22616476542077713	
LGYLPVQTVLEGDNLETPSQS(ph)PQLFHDDTHSR	ddPTM_K562_Methotrexat_30min_R1	1	LGYLPVQTVLEGDNLETPSQSPQLFHDDTHSR	32	0	Q5JT44;Q5JT49;H0Y337	Q5JT44	UTRN		1	LGYLPVQTVLEGDNLET(0.002)PS(0.276)QS(0.721)PQLFHDDT(0.001)HSR	104.15	4.5921e-12	5644700.0	2063.2	1561.0	1906.6	1936.9	1643.7	1759.6	1971.1	2297.4	2051.1	2900.4	True	False	1972.5041984059258	1818.9287175367424	1506.4307152306185	1767.094984231251	1859.8753606570813	2099.6177967737126	2413.1693506435095	2216.5991398212855	1955.7448086905376	2375.1094545493656	0.8304898094812952	0.7658294290617657	0.6342573864733475	0.7440057050198242	0.7830693263818274	0.8840088580979008	1.0160244809018137	0.9332618905522589	0.8234335495336593	1.0	11.213778284799131	-8.266402837019234	2.611896394799745	0.9386226580154435	0.7397248470974249	0.6560182048159175	0.06631614467575131	0.18498050837880195	2.5050815679714606	0.026116177909245048	0.024111474776141395	5.414983816155645e-09	8.266402837019234	-0.1988978109180186	
LGYLVS(ph)PPQQIR	ddPTM_K562_Methotrexat_30min_R1	2	LGYLVSPPQQIR	12	0	A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8	A0A2R8Y880	RBBP6	E3 ubiquitin-protein ligase RBBP6	1	LGYLVS(1)PPQQIR;LGYLVS(1)PPQQIR	131.79	0.00012851	113663000.0	2828.8999999999996	2364.3	3033.2	2667.7	1952.87	1834.33	2040.92	2350.0	2326.6	3141.3	True	False	2704.5449432292176	2754.9603887713797	2396.5727711305535	2433.8268828714467	2209.706634766924	2188.788311636695	2498.6482629574093	2267.349168007321	2218.4368738235103	2572.3801301806384	1.0513784146821636	1.0709771687506855	0.9316557623084504	0.9461381132268883	0.8590124798591696	0.8508805856321839	0.9713371028029005	0.8814207283773813	0.8624063169340864	1.0	11.328888135494381	-6.8333608365191685	3.499588646022084	0.9049841151555768	1.064027056731856	0.6037224875718245	0.04799935379303291	0.14159075070651908	3.4108928286326385	0.012734987027472599	0.0317497122400357	1.4677063171484218e-07	6.8333608365191685	0.15904294157627918	
LHAEFAAERDWEQFHQPR	ddPTM_K562_Methotrexat_30min_R1	1	LHAEFAAERDWEQFHQPR	18	1	Q9H773	Q9H773	DCTPP1	dCTP pyrophosphatase 1	0		92.773	0.0010402	12675000.0	4102.3	3389.6	5512.5	4412.6	4091.0	3655.7	3560.4	3898.5	3596.1	4490.5	False	True	3921.9678039553255	3949.673786651214	4355.501582769738	4025.754209003469	4629.038206757997	4362.1122866933765	4358.910332317563	3761.387545309163	3428.9180959153814	3677.226936165333	1.0665558237330905	1.0740903009837062	1.1844527570310142	1.0947799194578907	1.258839415438751	1.1862504986549054	1.1853797462016582	1.0228869772262665	0.9324738873720718	1.0	11.844402498347042	-9.414336881005626	4.087069091936269	0.9685262949877926	1.1515034750575779	0.6337627753341929	0.05833473339826979	0.15514715752126348	4.408176471975257	0.038119346369724555	0.016594642542288377	3.8517945913249886e-10	9.414336881005626	0.18297718006978525	
LHDEKEETAGSYDSR	ddPTM_K562_Methotrexat_30min_R1	1	LHDEKEETAGSYDSR	15	1	A0A2R8YEF8;H9KV28;A0A2R8Y5N1;A0A140T8Z0;A0A0G2JH68;O60610-2;O60610-3;O60610	A0A2R8YEF8	DIAPH1	Protein diaphanous homolog 1	0		94.53200000000001	0.020916999999999998	8376600.0	1768.3	1576.0	2434.7	2000.3	1541.2	1468.4	1311.9	1807.8	1845.3	2438.6	False	True	1690.5676493026344	1836.4072125803366	1923.689742144124	1824.9368046661011	1743.8948140443456	1752.1475180623565	1606.1269702750853	1744.2186493292052	1759.512405770879	1996.945909482859	0.8465765854120876	0.9196078891570496	0.9633158980466798	0.9138639138897345	0.8732809465510035	0.8774136093231003	0.8042916749262465	0.8734431118271493	0.881101685035892	1.0	10.963579540239317	-7.755895063982355	9.156335525173358	0.8741662076452168	0.915262444890971	0.02931560005260403	0.052748455945892815	0.2760325224432868	246.5181952758855	0.015587536792631203	0.019134994365925074	1.7543043328588066e-08	7.755895063982355	0.041096237245754175	
LHDFGYR	ddPTM_K562_Methotrexat_30min_R1	2	LHDFGYR	7	0	A0A0C4DFS8;P43490	A0A0C4DFS8	NAMPT	Nicotinamide phosphoribosyltransferase	0	;	163.34	1.9495e-17	22458300.0	3233.7	2624.7	3804.4	3529.6	2483.9	2729.6000000000004	2690.4	3550.6000000000004	3137.5	3833.1000000000004	False	True	3091.55041992305	3058.3870627281813	3005.9084302021206	3220.165448057526	2810.576387623118	3257.0565685800907	3293.7906858968577	3425.7233855007626	2991.6383098174465	3138.888446501577	0.9849188566636423	0.9743535378381739	0.9576346791018749	1.0258935616671996	0.8954049930495693	1.0376464866759496	1.0493493929572189	1.091381055392037	0.9530884454182349	1.0	11.616038042305043														
LHDFLAHSSEESEET(ph)SSPPR	ddPTM_K562_Methotrexat_30min_R1	1	LHDFLAHSSEESEETSSPPR	20	0	P46100-4;P46100;A0A096LNW1;A0A096LNL9;P46100-6;A0A087WWG0	P46100-4	ATRX	Transcriptional regulator ATRX	1	LHDFLAHSSEES(0.003)EET(0.591)S(0.203)S(0.203)PPR	112.56	0.00033107	15634000.0	1162.7	986.29	1493.4	1141.5	1055.0	988.49	1069.8	1269.1	1324.9	1318.3	True	False	1111.5891001776708	1149.25765843646	1179.9557485185178	1041.4264672930829	1193.7509919652123	1179.5017026215319	1309.7298824607713	1224.4650336672728	1263.3056881839466	1079.5430954118158	1.0296847850744026	1.0645778416081202	1.0930140292994948	0.9646918883732081	1.1057928090493037	1.0925934384968528	1.213226121335291	1.134243773010445	1.1702225631872811	1.0	10.076205121626868	-8.154341926711748	2.5721689054493373	1.1383536707637325	1.044258347368917	0.2656494799522554	0.061692309229374555	0.33661987222714274	4.347856245511107	0.021488792227091533	0.02131507415901949	7.009032492435418e-09	8.154341926711748	-0.09409532339481541	
LHEEGIIYR	ddPTM_K562_Methotrexat_30min_R1	2	LHEEGIIYR	9	0	A0A140T936;P26640;P26640-2	A0A140T936	VARS	Valine--tRNA ligase	0	;	177.36	1.3000999999999999e-28	15606000.0	4134.5	3448.5	4613.1	4191.299999999999	4053.0	3619.5	3384.0	4247.299999999999	3841.3	4918.3	False	True	3952.752330510514	4018.3060105223935	3644.8733517415103	3823.8552364130496	4586.04054069669	4318.9171490239	4142.948141939849	4097.920051607441	3662.7188014348217	4027.548210698573	0.9814289298910501	0.9977052539925831	0.9049856540660284	0.9494250686448784	1.1386680682094796	1.0723439976587616	1.0286526504970774	1.0174726253361626	0.909416501013039	1.0	11.97568614309597														
LHGELQDR	ddPTM_K562_Methotrexat_30min_R1	2	LHGELQDR	8	0	Q9NR30;Q9NR30-2	Q9NR30	DDX21	Nucleolar RNA helicase 2	0	;	146.58	2.0019e-08	18789600.0	2406.63	1762.5	2141.8999999999996	2472.8999999999996	1657.13	1520.48	1949.5	2054.73	2393.6000000000004	3020.2	False	True	2300.837426817396	2053.723167622364	1692.3444607953743	2256.1046964249367	1875.071641057168	1814.291240985733	2386.7250008013393	1982.4639812679495	2282.322058447501	2473.21251366363	0.9303031640451752	0.8303868576906616	0.68426973074322	0.9122162709272863	0.7581522536773756	0.7335767674481718	0.9650302946534204	0.8015744584484886	0.9228168003511521	1.0	11.272170494966609	-10.039752782138876	0.8195548675787918	1.0003291898259643	0.8141690594953743	0.2975713574182226	0.08522118794244395	0.8778993051664933	1.3324169156078627	0.08129259397188685	0.02962187102919038	9.125301403430844e-11	10.039752782138876	-0.18616013033058998	
LHNELQSGS(ph)LR	ddPTM_K562_Methotrexat_30min_R1	4	LHNELQSGSLR	11	0	Q5JTH9-2;Q5JTH9-3;Q5JTH9;A0A087X1U8	Q5JTH9-2	RRP12	RRP12-like protein	1	LHNELQS(0.019)GS(0.981)LR;LHNELQS(0.027)GS(0.973)LR;LHNELQS(0.033)GS(0.967)LR;LHNELQS(0.01)GS(0.99)LR	139.77	3.7622e-05	63623100.0	5463.92	4822.01	5803.1	5796.99	5016.38	4352.38	4481.889999999999	5700.3	5278.57	6162.2	True	False	5223.732619113077	5618.7651923442345	4585.108614053708	5288.776887107604	5676.121896753036	5193.4158367367445	5487.067921949994	5499.8172180392	5033.1704328456035	5046.165867061133	1.0351884493553831	1.1134721569540045	0.9086321644682792	1.048078288831153	1.1248385499580866	1.0291805647207886	1.087373674687717	1.0899002060037855	0.9974246914275336	1.0	12.300971913024197														
LHPDGS(ph)PDVAGEK	ddPTM_K562_Methotrexat_30min_R1	2	LHPDGSPDVAGEK	13	0	Q7Z2Z1-2;Q7Z2Z1	Q7Z2Z1-2	TICRR	Treslin	1	LHPDGS(1)PDVAGEK;LHPDGS(1)PDVAGEK	123.38	0.00097811	18893400.0	2917.1	1950.6599999999999	4036.6	2966.2	2186.1	1949.61	1694.5	2792.8	2677.3	2696.5	True	False	2788.8677768369153	2272.9734094492132	3189.3728234028704	2706.1578513225936	2473.6104678058296	2326.3445401045688	2074.534759609064	2694.575641025891	2552.832907370277	2208.1377203807633	1.262995397024427	1.0293621581978456	1.4443722390888312	1.2255385279392599	1.1202247237456227	1.0535323583455756	0.9394951865825375	1.220293288844886	1.1561022140095845	1.0	11.108614439710315	-7.8235296476405285	3.826351867054669	1.080443139400366	1.241111125203093	0.30893861814760226	0.11798459438905358	0.30772797922947503	9.042813357742567	0.038391813531098454	0.04539518861095125	1.501309913510277e-08	7.8235296476405285	0.16066798580272712	
LHPPS(ph)PVPQGVCPAHREPLAAFCGDELR	ddPTM_K562_Methotrexat_30min_R1	1	LHPPSPVPQGVCPAHREPLAAFCGDELR	28	1	Q96F44-2;Q96F44-3;Q96F44	Q96F44-2	TRIM11	E3 ubiquitin-protein ligase TRIM11	1	LHPPS(1)PVPQGVCPAHREPLAAFCGDELR	45.878	0.029123000000000003	18245000.0	611.61	673.26	976.03	898.41	666.14	651.38	584.45	537.0	766.95	847.71	True	False	584.7243567211357	784.5047715366992	771.1746412391378	819.6477901715094	753.7490860546981	777.2499661641632	715.52779005814	518.1134056255024	731.2946619010322	694.1815045221498	0.8423220049972945	1.1301147703102876	1.1109121119122691	1.1807398855083675	1.0858098078737384	1.1196638935219037	1.030750294263003	0.7463659032260641	1.0534631895795463	1.0	9.439169116898011	-9.013030833726962	23.80466479804817	0.9176603278892822	1.086111616378862	0.24431677351708292	0.11252959221098296	389.9305978941083	712320.7012126395	0.04883392100885628	0.029921325988492165	9.704410661234656e-10	9.013030833726962	0.1684512884895798	
LHQLS(ph)GS(ph)DQLESTAHSR	ddPTM_K562_Methotrexat_30min_R1	1	LHQLSGSDQLESTAHSR	17	0	A0A087X2D8;O60271-4;O60271-2;O60271;O60271-5;O60271-3	A0A087X2D8	SPAG9	C-Jun-amino-terminal kinase-interacting protein 4	2	LHQLS(1)GS(1)DQLESTAHSR	92.913	0.012107999999999999	21329000.0	1346.3	1013.3	1719.8	1184.2	1209.4	1160.2	1225.2	1398.2	1587.0	1422.3	True	False	1287.1182640141021	1180.7306018449592	1358.8374824575772	1080.3830245891093	1368.4572982774669	1384.3922299482067	1499.982288269712	1349.0245134926965	1513.2207163921232	1164.707687631211	1.1050998269203927	1.0137570262340552	1.166676838221261	0.9276001490008178	1.1749362632444222	1.1886177490283345	1.2878615846696988	1.158251574896316	1.2992278942278812	1.0	10.185752204759945	-7.973276855327416	24.668841959751443	1.200641331857893	1.0576481418259134	0.30504653129871184	0.09617843541647207	206.02483113055595	190185.9779350866	0.027714867484068553	0.03142476373364702	1.0634648613737039e-08	7.973276855327416	-0.14299319003197963	
LHQLS(ph)GSDQLESTAHSR	ddPTM_K562_Methotrexat_30min_R1	2	LHQLSGSDQLESTAHSR	17	0	A0A087X2D8;O60271-4;O60271-2;O60271;O60271-5;O60271-3	A0A087X2D8	SPAG9	C-Jun-amino-terminal kinase-interacting protein 4	1	LHQLS(0.615)GS(0.385)DQLESTAHSR;LHQLS(0.898)GS(0.102)DQLESTAHSR	85.397	0.007230599999999999	48895000.0	1018.8	901.32	1221.3	1365.3	953.34	950.0	1001.7	1186.32	1136.6	1415.8	True	False	974.0147718766756	1050.2478101795118	964.9658200520054	1245.6062687649985	1078.7209200759396	1133.5740548619167	1226.3567239305985	1144.5964531874226	1083.7597140839866	1159.3849006174983	0.8401133837070908	0.9058663862364784	0.8323084245258467	1.0743681999839554	0.9304251931359496	0.9777374660116459	1.0577649607800055	0.9872445747549419	0.9347712856246161	1.0	10.179143886404825	-7.247478605590334	24.971869373288726	0.9933378030422819	0.8640730895161953	0.6377148429692405	0.046647025033719654	511.99013901996904	915804.3108316787	0.012461087165253418	0.021440278566968982	5.6561562001335447e-08	7.247478605590334	-0.1292647135260866	
LHQLSGS(ph)DQLESTAHSR	ddPTM_K562_Methotrexat_30min_R1	1	LHQLSGSDQLESTAHSR	17	0	A0A087X2D8;O60271-4;O60271-2;O60271;O60271-5;O60271-3	A0A087X2D8	SPAG9	C-Jun-amino-terminal kinase-interacting protein 4	1	LHQLS(0.302)GS(0.698)DQLESTAHSR	90.397	0.004414100000000001	26975000.0	1464.6	1109.5	1880.3	1615.1	1485.7	1538.7	1357.1	1613.6	1855.4	1673.3	True	False	1400.2179376625231	1292.8260167245458	1485.6507258198533	1473.5066906045183	1681.09559124428	1836.0319981221378	1661.464220870736	1556.848773402813	1769.1428589753907	1370.249155391481	1.021871045972278	0.9434970360227549	1.0842194063570882	1.0753567588834139	1.226853951801189	1.3399256557816175	1.212527089933549	1.1361793344495954	1.291110344432174	1.0	10.420222530085447	-7.447584903406857	1.8758148449426435	1.2144112573536774	0.9976715604118994	0.45055252199129525	0.09216908259944773	0.28728203803860275	2.004478579941713	0.02898762186870445	0.049375068511911716	3.5679199058729346e-08	7.447584903406857	-0.21673969694177797	
LHRIET(ph)DEEESCDNAHGDANQPAR	ddPTM_K562_Methotrexat_30min_R1	3	LHRIETDEEESCDNAHGDANQPAR	24	1	Q96T23-3;Q96T23-2;Q96T23	Q96T23-3	RSF1	Remodeling and spacing factor 1	1	LHRIET(0.821)DEEES(0.179)CDNAHGDANQPAR;LHRIET(0.992)DEEES(0.008)CDNAHGDANQPAR;LHRIET(0.5)DEEES(0.5)CDNAHGDANQPAR	103.58	5.7766e-07	158829000.0	2661.54	2009.33	2578.1400000000003	2793.08	2049.43	1845.71	1935.06	2159.67	2246.6800000000003	2655.22	True	False	2544.541888438013	2341.3376297297254	2037.0236463677052	2548.215012936456	2318.965967263759	2202.3673355780916	2369.0464632216685	2083.7131819873907	2142.2323371794937	2174.3339283921414	1.1702626975607329	1.0768068322702753	0.9368494966520744	1.1719520077676335	1.0665178595536928	1.012892871154653	1.0895504284263786	0.9583225257070969	0.9852361264323434	1.0	11.086357807290417	-9.260791749430552	24.985052749907496	0.9788344912734117	1.070750603026287	0.30016464701865053	0.06537517473417724	76.03212978836653	2933424.9250531686	0.033034209294078735	0.017575827975354848	5.485399348054468e-10	9.260791749430552	0.09191611175287528	
LHS(ph)PGATSTAELGSR	ddPTM_K562_Methotrexat_30min_R1	1	LHSPGATSTAELGSR	15	0	H7C0P0;Q9BV73-2;Q9BV73	H7C0P0	CEP250	Centrosome-associated protein CEP250	1	LHS(1)PGATSTAELGSR	85.046	0.014933000000000002	24667000.0	938.61	739.16	1059.3	986.33	878.68	692.91	716.39	982.9	1026.1	1082.6	True	False	897.3498282598805	861.2936264282249	836.9674061910172	899.8599802761161	994.2418214407512	826.8050508993371	877.0586936773897	948.3308498869766	978.3968349653165	886.530649391513	1.0122039535528675	0.9715328251983054	0.9440930291191687	1.01503538641755	1.1214974035282004	0.9326299676912809	0.9893157041771489	1.069710167987854	1.1036243762546254	1.0	9.792026699027035	-7.7013587907613354	0.5806063903248004	1.0437205038567017	0.9727015016422179	0.11480601669905732	0.05705477807544571	2.4748037147090383	1.6836940589237557	0.044286550050705815	0.09589133590133768	1.9890294308039743e-08	7.7013587907613354	-0.07101900221448376	
LHS(ph)PQTHWK	ddPTM_K562_Methotrexat_30min_R1	2	LHSPQTHWK	9	0	B8ZZS4;Q9H8Y5	B8ZZS4	ANKZF1	Ankyrin repeat and zinc finger domain-containing protein 1	1	LHS(1)PQTHWK;LHS(0.999)PQT(0.001)HWK	79.82	0.023472	23500000.0	5689.9	3972.1	7746.1	6821.700000000001	4321.7	4308.2	3602.8	5419.5	5513.4	7494.5	True	False	5439.778808893888	4628.422010844136	6120.299466719757	6223.652152372516	4890.079300451237	5140.698677006429	4410.819611637378	5228.893113198155	5257.083237401596	6137.173426810172	0.8863655025830419	0.7541618411213422	0.9972505323025905	1.0140909698240828	0.7967966619761765	0.8376329491601696	0.718705388439695	0.8520034793795782	0.8565968193820446	1.0	12.58335863699262														
LHS(ph)SNPNLSTLDFGEEK	ddPTM_K562_Methotrexat_30min_R1	2	LHSSNPNLSTLDFGEEK	17	0	Q9H4L5-7;Q9H4L5-5;Q9H4L5-3;Q9H4L5;Q9H4L5-8;Q9H4L5-6;Q9H4L5-4;Q9H4L5-2	Q9H4L5-7	OSBPL3	Oxysterol-binding protein-related protein 3	1	LHS(0.5)S(0.5)NPNLSTLDFGEEK;LHS(0.5)S(0.5)NPNLSTLDFGEEK	110.38	0.00066914	39798000.0	6180.700000000001	4723.7	8613.8	6494.4	4762.200000000001	4286.5	3865.8999999999996	6746.0	7190.0	8434.2	True	False	5909.003828561216	5504.211135828512	6805.881094541852	5925.046035206478	5388.512771504014	5114.805459121689	4732.926484020467	6508.739356330798	6855.738469350578	6906.684650930998	0.8555485196163839	0.7969396916198516	0.9854049284882931	0.8578712268856523	0.7801880415631341	0.740558707632935	0.6852674942068601	0.9423825880704487	0.9926236415653417	1.0	12.753777638480441	-9.486437403429552	12.293484725478132	0.9867512342398232	0.8176217033148514	0.5057756597482509	0.07530279770603922	1.3748979494368239	464.0795576501277	0.04611544515441144	0.02191894379858688	3.2625907200772277e-10	9.486437403429552	-0.16912953092497185	
LHS(ph)SNPNLSTLDFGEEKNYSDGSETSSEFSK	ddPTM_K562_Methotrexat_30min_R1	1	LHSSNPNLSTLDFGEEKNYSDGSETSSEFSK	31	1	Q9H4L5-7;Q9H4L5-5;Q9H4L5-3;Q9H4L5;Q9H4L5-8;Q9H4L5-6;Q9H4L5-4;Q9H4L5-2	Q9H4L5-7	OSBPL3	Oxysterol-binding protein-related protein 3	1	LHS(0.498)S(0.498)NPNLS(0.004)T(0.001)LDFGEEKNYSDGSETSSEFSK	70.465	3.0294e-05	12905000.0	1136.7	572.89	1921.6	1406.6	580.23	581.68	545.12	991.42	1140.2	1815.6	True	False	1086.732029046149	667.5503350349933	1518.2824202177467	1283.285561887385	656.5404152303081	694.0814276127152	667.3770363871896	956.5511966577949	1087.1923508697537	1486.7772464762882	0.7309313023331102	0.4489914925837814	1.0211902447499293	0.8631323656107966	0.4415862677387153	0.4668361916741135	0.4488749326564524	0.6433722327435756	0.7312409128175965	1.0	10.537972799250285	-10.144634761349002	2.6414585028320046	0.999579524160538	0.6300073307341101	0.26176962286998506	0.18586846869351145	0.8644397466617479	11.518428672869653	0.19356481854570332	0.052191036356578104	7.167459351844419e-11	10.144634761349002	-0.3695721934264279	
LHSYS(ph)SPSTK	ddPTM_K562_Methotrexat_30min_R1	5	LHSYSSPSTK	10	0	A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37	A0A494C001	RBM15	Putative RNA-binding protein 15	1	LHS(0.001)YS(0.9)S(0.099)PS(0.001)TK;LHS(0.001)YS(0.49)S(0.176)PS(0.307)T(0.025)K;LHS(0.006)YS(0.598)S(0.395)PS(0.001)TK;LHSYS(0.841)S(0.159)PSTK;LHS(0.002)YS(0.476)S(0.212)PS(0.282)T(0.027)K	137.01	0.00013621	125266000.0	26268.0	19288.699999999997	37911.4	28998.7	19742.3	18261.1	18139.5	22354.700000000004	23422.1	31078.500000000004	True	False	25113.2901724151	22475.82982315886	29954.31522993502	26456.42899438627	22338.758491634886	21789.799129725205	22207.74462787171	21568.47253023542	22333.211683306825	25449.882493177647	0.9867743074706622	0.8831408093606703	1.17699228033626	1.039550143364255	0.8777548775568311	0.8561846655113791	0.8726069613022749	0.8474880988553595	0.8775369273038369	1.0	14.635371374675518	-7.765298842739538	24.954269733889223	0.8785496950012123	1.022821846911045	0.40649150341982443	0.07817336363672724	92.93292117860051	600879.4997421438	0.02438580317685072	0.028708664481692545	1.7167266823976045e-08	7.765298842739538	0.14427215190983278	
LHTDDELNWLDHGR	ddPTM_K562_Methotrexat_30min_R1	2	LHTDDELNWLDHGR	14	0	Q9Y490	Q9Y490	TLN1	Talin-1	0	;	175.88	0.00010763	73319100.0	2972.1	2171.01	3377.7	3214.3999999999996	2616.3	3082.3	2614.6	2907.6000000000004	2954.5	3296.2000000000003	False	True	2841.4500426920567	2529.732501639618	2668.7669290016042	2932.598542677955	2960.389308320933	3677.910851895669	3200.990606358136	2805.3380599566312	2817.145939874309	2699.2262391689505	1.0526905827526687	0.9372065464280915	0.9887155401331886	1.0864589637291227	1.0967547904515003	1.3625796898847724	1.1858919270670958	1.0393119403064008	1.0436864828128167	1.0	11.39833018790188	-7.446662587696914	2.51794869371686	1.137880766967499	0.9864801108540321	0.24147774834892022	0.0993874593751748	0.3935435524329781	4.9014834874733335	0.032742128895934496	0.05153225852906332	3.575505186118743e-08	7.446662587696914	-0.15140065611346698	
LHVGNIS(ph)PTCTNK	ddPTM_K562_Methotrexat_30min_R1	1	LHVGNISPTCTNK	13	0	D6R9K7;J3QRR5;E9PB51;Q9BWF3-3;Q9BWF3-4;Q9BWF3-2;Q9BWF3	D6R9K7	RBM4	RNA-binding protein 4	1	LHVGNIS(0.931)PT(0.069)CTNK	82.663	0.023043	58945000.0	5207.7	3626.4	7146.2	5629.6	3600.5	3450.0	3452.1	4265.2	4519.0	5696.0	True	False	4978.775743523912	4225.600961739426	5646.310278601199	5136.061708517859	4074.028859308766	4116.663672919591	4226.321300470023	4115.190498461628	4308.912676355391	4664.399204631498	1.0673991494081927	0.9059260960218909	1.210511800318188	1.101119669049344	0.8734305707074717	0.8825710434115426	0.9060805293581031	0.8822552097117812	0.9237872847754696	1.0	12.187475552166154	-7.761734565881648	24.999502005811298	0.9037640233534334	1.0693791610100383	0.5076826762183662	0.07690661816647167	6.559404839961933	555538.1725463967	0.02372834849944768	0.028614569732900816	1.7308739195603498e-08	7.761734565881648	0.16561513765660485	
LHVGNIS(ph)PTCTNKELR	ddPTM_K562_Methotrexat_30min_R1	2	LHVGNISPTCTNKELR	16	1	D6R9K7;J3QRR5;E9PB51;Q9BWF3-3;Q9BWF3-4;Q9BWF3-2;Q9BWF3	D6R9K7	RBM4	RNA-binding protein 4	1	LHVGNIS(0.999)PT(0.001)CTNKELR;LHVGNIS(0.996)PT(0.004)CTNKELR	133.32	3.1033e-05	62207000.0	5157.299999999999	4172.3	7114.4	7460.099999999999	3858.9	3653.4	4224.9	4380.0	4742.1	7419.2	True	False	4930.591267176659	4861.701658025981	5621.184664028489	6806.084615552451	4366.412988525648	4359.367844244762	5172.441372600965	4225.952917392366	4521.640806051091	6075.510986482091	0.8115516996261124	0.800212800016852	0.9252200640465519	1.1202489190943568	0.7186906579941742	0.7175310609995245	0.8513590682511414	0.6955716032437501	0.7442404130470122	1.0	12.568790037686918														
LHVGNISPT(ph)CTNK	ddPTM_K562_Methotrexat_30min_R1	1	LHVGNISPTCTNK	13	0	D6R9K7;J3QRR5;E9PB51;Q9BWF3-3;Q9BWF3-4;Q9BWF3-2;Q9BWF3	D6R9K7	RBM4	RNA-binding protein 4	1	LHVGNIS(0.04)PT(0.574)CT(0.385)NK	151.3	4.1115e-09	46651000.0	2669.8	2134.1	3765.1	2611.9	2491.5	2125.4	2043.1	2534.6	2626.9	3105.3	True	False	2552.4387887282555	2486.723751502347	2974.856963135843	2382.918782236359	2819.1759208353815	2536.103469687913	2501.3171834507402	2445.4566813750444	2504.7759923695457	2542.9000790277723	1.0037511146344886	0.9779085588188337	1.1698678165416634	0.9370870691653056	1.1086459684696843	0.9973272212322011	0.9836474520096242	0.9616802097509142	0.9850076347975094	1.0	11.312259058399384	-8.506011043860761	24.167452396245256	0.9809757530328548	1.0391309134451032	0.16323183857924373	0.06172112097237875	848.9173839915371	1216303.3422816845	0.021164414963970785	0.018189363637333998	3.1188102735206226e-09	8.506011043860761	0.05815516041224844	
LHVGNISPT(ph)CTNQELR	ddPTM_K562_Methotrexat_30min_R1	2	LHVGNISPTCTNQELR	16	0	E9PLB0;E9PM61;U3KQD5;Q9BQ04	E9PLB0	RBM4B	RNA-binding protein 4B	1	LHVGNIS(0.048)PT(0.916)CT(0.035)NQELR;LHVGNIS(0.043)PT(0.589)CT(0.367)NQELR	188.39	3.0458e-10	54718000.0	3752.0	3754.12	4723.4	4464.299999999999	3569.47	3245.92	2977.25	4418.1	3562.8999999999996	4586.1	True	False	3587.0665725179465	4374.424520870622	3732.0228890801964	4072.9217502728948	4038.917870417127	3873.1481012183076	3644.974100351776	4262.712918797082	3397.261556668867	3755.5128497823903	0.955146930924706	1.164800839684011	0.9937452056105852	1.0845181239384913	1.0754637334422004	1.0313233521335798	0.9705662704796711	1.135054808571373	0.9046065590923802	1.0	11.874794219117046	-9.774463006161449	24.99470606949598	0.9523032920861685	1.0517425178224697	0.2559240292649486	0.06753588981875706	334.544267468243	642031.3247191547	0.05844727981869678	0.015474323538115217	1.6808810995189e-10	9.774463006161449	0.09943922573630126	
LHVTLT(ph)ESINSRCT(ph)VLR	ddPTM_K562_Methotrexat_30min_R1	1	LHVTLTESINSRCTVLR	17	1	H7BZ57	H7BZ57	TTC3		2	LHVT(0.304)LT(0.48)ES(0.12)INS(0.096)RCT(1)VLR	82.34899999999999	0.010201	49709000.0	1469.5	1260.7	2191.9	1662.6	1064.4	1046.3	1070.3	1213.6	1477.4	1722.1	True	False	1404.9025395296173	1469.0092467639786	1731.8501440858024	1516.842439353026	1204.3872567277463	1248.4826669494985	1310.3420201885997	1170.917000124972	1408.7159964698947	1410.211002509813	0.9962356959556067	1.0416946429644358	1.2280787350286975	1.0756138171191663	0.854047553581873	0.8853162148979978	0.9291815323072419	0.8303133347002972	0.9989398706737803	1.0	10.46169532636387	-7.710702333978827	7.6051723054901315	0.9070312837437499	1.0935914393105006	0.5425935876372763	0.07566785197875668	0.16790506783666975	21.270635351856896	0.022521143799468443	0.02894709962683838	1.9466938910804908e-08	7.710702333978827	0.18656015556675076	
LIDLESPT(ph)PESQK	ddPTM_K562_Methotrexat_30min_R1	2	LIDLESPTPESQK	13	0	F5GYF8;O43166-3;O43166-2;O43166	F5GYF8	SIPA1L1	Signal-induced proliferation-associated 1-like protein 1	1	LIDLES(0.267)PT(0.732)PES(0.001)QK;LIDLES(0.105)PT(0.895)PES(0.001)QK	166.86	6.6264e-09	48318000.0	7692.0	6006.0	10872.0	8210.0	5817.5	5083.1	4945.1	6823.6	6493.9	9069.3	True	False	7353.868890140742	6998.389415455266	8590.115774670765	7490.242046847314	6582.603218727604	6065.3371350195885	6054.164555764403	6583.610120346706	6192.000006413866	7426.761886686167	0.9901850903990744	0.9423204247333099	1.1566434882031325	1.008547488276815	0.8863355684700391	0.8166866297265862	0.8151822622208481	0.8864711459443765	0.8337415553222679	1.0	12.85851760871036	-7.77407247558136	4.137486019139089	0.8595110340232306	1.0301877049746826	0.5206484511322413	0.07100261934371056	0.15674151266918018	6.086657778716385	0.02200837630604653	0.026741850810146347	1.6823932778446824e-08	7.77407247558136	0.170676670951452	
LIDLHSPSEIVK	ddPTM_K562_Methotrexat_30min_R1	1	LIDLHSPSEIVK	12	0	P60866;P60866-2;G3XAN0	P60866	RPS20	40S ribosomal protein S20	0		91.961	0.02298	5605800.0	4337.2	3020.2	5561.2	5174.9	3785.8	3365.9	3296.0	4141.9	4556.7	5359.7	False	True	4146.5418812166445	3519.236715377622	4393.9801182946185	4721.22455155057	4283.69905723403	4016.3125381681302	4035.2119018421226	3996.2270293487313	4344.860011584112	4389.006393445124	0.9447564003117894	0.8018299359585164	1.00113322342317	1.0756932499805893	0.9760065657757147	0.9150846861755311	0.9193907550165831	0.9105083636508257	0.9899416000106668	1.0	12.099678656428305	-6.776868260326647	24.999962273256095	0.9699985390131164	0.8732931341895733	0.3272899367856269	0.05727514243850721	263.1800713892221	426440.9156104939	0.016128000326523517	0.033762509855402044	1.6715976028505388e-07	6.776868260326647	-0.09670540482354306	
LIDREIISHDTR	ddPTM_K562_Methotrexat_30min_R1	1	LIDREIISHDTR	12	1	B1AHF3;P00387-2;P00387;P00387-3	B1AHF3	CYB5R3	NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form	0		145.09	3.1715e-08	16424000.0	1700.6	1489.1	1863.6	1531.1	1579.0	1481.9	1721.9	1740.9	1387.5	1926.8	False	True	1625.843660240945	1735.1484646277802	1472.455827600849	1396.8708401861045	1786.6661766000673	1768.2562019998668	2108.079907094037	1679.6715602484867	1322.9954278475554	1577.8378489262584	1.0304250600575688	1.0997001154513906	0.9332111209037587	0.8853069668322986	1.132350943296182	1.1206830937685965	1.3360561153534352	1.0645400358417867	0.8384863050077503	1.0	10.62373323489937	-5.925039769363043	12.705525120946373	1.053920274686797	0.8199252365587087	0.0	0.13591842730865936	3319194.4497338296	15718326.260439191	0.0363083900343765	19870117.66678872	1.1883933984869206e-06	5.925039769363043	-0.2339950381280883	
LIDREIISHDTRR	ddPTM_K562_Methotrexat_30min_R1	1	LIDREIISHDTRR	13	2	B1AHF3;P00387-2;P00387;P00387-3	B1AHF3	CYB5R3	NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form	0		59.975	0.027468	7473200.0	3111.5	2403.3	3106.6	3327.7	2366.8	2364.4	2466.2	3344.6	2958.2	3928.6	False	True	2974.7221856049046	2800.4044758847226	2454.5671142009023	3035.965707587551	2678.0756851026213	2821.2868371742284	3019.3081287387886	3226.9685222626717	2820.6739276819026	3217.092471087657	0.9246616975853323	0.8704768361656519	0.7629768607089634	0.9436986144700811	0.8324521937652599	0.8769679027038934	0.9385207779613496	1.0030698686045776	0.8767773861123331	1.0	11.651541689618314	-8.7840156571203	3.7529764976985915	0.9574063273377748	0.8646966411894185	0.36302737184849687	0.0563311193971112	0.24436118391904837	7.358018110672625	0.023643853457072147	0.016241332573589094	1.644312441637872e-09	8.7840156571203	-0.09270968614835629	
LIEDNEY(ph)TAR	ddPTM_K562_Methotrexat_30min_R1	2	LIEDNEYTAR	10	0	J3QRU1;P07947;Q573B4;P06241-3;P06239;P06241-2;P12931;P06241;P06239-3;P12931-2	J3QRU1	YES1;LCK;FYN;SRC	Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Yes;Tyrosine-protein kinase Fyn;Tyrosine-protein kinase Lck;Proto-oncogene tyrosine-protein kinase Src	1	LIEDNEY(0.971)T(0.029)AR;LIEDNEY(0.999)T(0.001)AR	185.33	1.6363999999999997e-84	21205000.0	2523.3	2145.42	6342.3	3440.7	3202.0	2724.7	2078.55	3408.2000000000003	2721.8	2945.3	True	False	2412.3787533141085	2499.9141890952465	5011.137902657692	3139.059173031369	3623.119124429014	3251.2097129287	2544.7177483537457	3288.331674213849	2595.264112083227	2411.877629459472	1.0002077733333217	1.0365012546907302	2.0776916048517533	1.301500181721436	1.5021985693532034	1.3479994479062072	1.055077470461901	1.3633907599826283	1.0760347375769863	1.0	11.23594099627384	-8.629347293374542	5.967779255555071	1.1552817994804454	1.4007224324113088	0.14928461638817525	0.2925056259416266	0.4661038575205584	23.012039447853255	0.11710817829763177	0.0900140085623638	2.3477546350525714e-09	8.629347293374542	0.24544063293086338	
LIEDTEDWRPR	ddPTM_K562_Methotrexat_30min_R1	2	LIEDTEDWRPR	11	1	Q96HC4;Q96HC4-7;Q96HC4-4;H0YBI4;H0Y8Y3;Q96HC4-3;Q96HC4-2;Q96HC4-6	Q96HC4	PDLIM5	PDZ and LIM domain protein 5	0	;	194.12	4.1928999999999994e-07	65142000.0	7000.6	6636.2	9340.4	8303.5	6521.5	6503.7	5340.6	7947.3	7199.9	7782.4	False	True	6692.862006281757	7732.719253886827	7379.977684118365	7575.545047015435	7379.191558389699	7760.447979584678	6538.365498476344	7667.788954427475	6865.178220511437	6372.931947002135	1.050201392693377	1.2133691867719292	1.1580192202726958	1.1887064086066408	1.1578958664168562	1.2177202022744398	1.0259587820566687	1.2031807366206773	1.0772401584706797	1.0	12.637741539755979	-10.415047378898317	0.6833579638589571	0.9970492732800343	1.1603766669574436	0.34505329405766305	0.06366190479124237	1.5418415140254966	1.320792127423542	0.06665295099993135	0.02324236560308823	3.845498276991651e-11	10.415047378898317	0.16332739367740923	
LIEGVHPGSLVEKLPDS(ph)PALAK	ddPTM_K562_Methotrexat_30min_R1	1	LIEGVHPGSLVEKLPDSPALAK	22	1	E9PNJ4;Q13586;G0XQ39;H0YDB2	E9PNJ4	STIM1	Stromal interaction molecule 1	1	LIEGVHPGS(0.001)LVEKLPDS(0.999)PALAK	64.5	0.008974700000000002	10129000.0	1987.3	1285.5	2580.6	2109.3	1333.3	974.0	999.66	1335.8	1406.1	2604.2	True	False	1899.9406715258308	1497.907025236056	2038.9673259855952	1924.3809438995186	1508.6523199878834	1162.2117151952698	1223.8592020010606	1288.8191568613518	1340.730717907349	2132.5541447860505	0.8909225944724809	0.7024004660788269	0.9561151499814113	0.9023831580569707	0.7074391633508745	0.5449857946335376	0.5738936124990368	0.6043547170947227	0.6286971522788034	1.0	11.058366656181112	-7.91013440954863	4.756568304252534	0.6382263323820822	0.8568909633497364	0.30168483185007533	0.13502942395504838	0.22444055091382745	8.86912150570981	0.040845541413160484	0.046556906072411156	1.2298880745541007e-08	7.91013440954863	0.2186646309676542	
LIELCRSPS(ph)ER	ddPTM_K562_Methotrexat_30min_R1	1	LIELCRSPSER	11	1	A0A0A0MSI1;Q1MX18-3;Q1MX18-4;Q1MX18-6;Q1MX18-2;Q1MX18-5;Q1MX18	A0A0A0MSI1	INSC	Protein inscuteable homolog	1	LIELCRS(0.095)PS(0.905)ER	74.649	0.031152	27485000.0	3172.1	3599.4	4352.6	3645.7	3502.3	3176.1	3140.4	3494.1	3660.7	3683.1	True	False	3032.6582821652937	4194.139670660957	3439.048741798378	3326.0871413144046	3962.9138380661266	3789.8363743651917	3844.7146409420493	3371.210522525267	3490.5148560155303	3016.0549000312944	1.0055049999699366	1.3906045512027776	1.140247394622258	1.1027939648180454	1.3139395566125165	1.2565541742379651	1.2747495547584882	1.117755025775654	1.1573114454844018	1.0	11.55844697430382	-10.097898990791137	1.2864777971811867	1.0031903608048391	1.2144772940980577	0.2458155542567373	0.10697890388027376	0.766088767181536	2.7388209044150464	0.09810708481583255	0.029949943105567436	7.98180308291844e-11	10.097898990791137	0.21128693329321857	
LIESLS(ph)PDFCHQNK	ddPTM_K562_Methotrexat_30min_R1	1	LIESLSPDFCHQNK	14	0	Q9H6R7;Q9H6R7-2	Q9H6R7	C2orf44	WD repeat and coiled-coil-containing protein C2orf44	1	LIES(0.052)LS(0.948)PDFCHQNK	95.236	0.0081405	0.0	1215.7	1098.6	1720.6	1550.5	943.44	990.23	783.86	1115.4	1421.9	1522.8	True	False	1162.2592836380788	1280.1249769928675	1359.469573390225	1414.5700723065474	1067.5188965494413	1181.5779329957002	959.6605586704994	1076.1707497852622	1355.7961793559916	1247.0061637662998	0.9320397263536676	1.0265586604051258	1.0901867311419335	1.1343729593397989	0.8560654530569778	0.9475317503058779	0.7695716240664456	0.8630035528733331	1.0872409605908573	1.0	10.284252880874655	-7.770397543960347	24.998485556309557	0.9075173435088628	1.0475871215596926	0.29080233346240414	0.09447354987712171	229.48590640001632	640397.2463703239	0.029855651322639364	0.0343437282761759	1.6966898275080093e-08	7.770397543960347	0.14006977805082976	
LIEVDDER	ddPTM_K562_Methotrexat_30min_R1	3	LIEVDDER	8	0	A2A3R7;P62753	A2A3R7	RPS6	40S ribosomal protein S6	0	;;	166.68	1.6434999999999998e-10	251627000.0	13985.2	13072.6	16071.199999999999	15578.599999999999	13115.6	12390.2	13264.2	15465.3	15080.400000000001	15711.0	False	True	13370.42735340565	15232.624953792965	12698.074745942678	14212.848325336858	14840.53128930705	14784.430794263282	16239.034498912097	14921.376633184518	14379.315495576424	12865.5856572973	1.0392396980250957	1.1839822422038822	0.9869799233539275	1.1047183318293323	1.1535060808436317	1.1491455723881192	1.2622071727998945	1.159789925670518	1.1176572818836694	1.0	13.651229511370262	-7.652616540237822	4.257212574926422	1.1549051669281798	1.0765549093671987	0.12756408469814806	0.07619441751261005	0.3773282853950583	12.177688016442666	0.022431274877366347	0.02920163613205233	2.2252738262001525e-08	7.652616540237822	-0.07835025756098113	
LIHGEDS(ph)DS(ph)EGEEEGR	ddPTM_K562_Methotrexat_30min_R1	1	LIHGEDSDSEGEEEGR	16	0	Q9C0C9	Q9C0C9	UBE2O	E2/E3 hybrid ubiquitin-protein ligase UBE2O	2	LIHGEDS(1)DS(1)EGEEEGR	119.65	0.00010545	0.0	1017.0	1228.9	1718.3	1127.4	1195.1	934.8	1151.9	1657.4	1384.1	1692.0	True	False	972.2938977214161	1431.9548372715585	1357.6523119588646	1028.5625924014203	1352.2765976280805	1115.4368699841261	1410.242897370128	1599.108302576737	1319.7534931054417	1385.562404184777	0.701732303637009	1.0334827453073667	0.9798564884976553	0.7423430292961762	0.9759766817747333	0.8050426791425648	1.0178126175413025	1.1541221800959618	0.952503827412916	1.0	10.436255974319705	-8.891323756954579	6.604621858685212	1.048640353179063	0.8844299957534698	0.32434870578816377	0.1106462010062441	0.2519687041865835	13.758826629096117	0.04521708255204622	0.030362530011338394	1.28432886414761e-09	8.891323756954579	-0.1642103574255931	
LIHGEDS(ph)DS(ph)EGEEEGRGSSGCSEAGGAGHEEGR	ddPTM_K562_Methotrexat_30min_R1	2	LIHGEDSDSEGEEEGRGSSGCSEAGGAGHEEGR	33	1	Q9C0C9	Q9C0C9	UBE2O	E2/E3 hybrid ubiquitin-protein ligase UBE2O	2	LIHGEDS(0.957)DS(0.972)EGEEEGRGS(0.021)S(0.025)GCS(0.025)EAGGAGHEEGR;LIHGEDS(0.522)DS(0.522)EGEEEGRGS(0.25)S(0.625)GCS(0.08)EAGGAGHEEGR	79.304	7.265e-06	53356000.0	1301.91	1131.04	1399.52	1451.87	1332.92	1054.3899999999999	1229.37	1369.7199999999998	1402.87	1282.25	True	False	1244.6795952630175	1317.9251356071472	1105.7798775724086	1324.5868112735945	1508.222343327271	1258.1359449535328	1505.087516919797	1321.546171235313	1337.650879902343	1050.0220997434571	1.1853841891205141	1.2551403784064588	1.0531015279036262	1.2614846978908534	1.4363719998805375	1.1981994905258873	1.4333865137576838	1.2585889111840551	1.273926406148175	1.0	10.036203977177072	-7.502757960356092	24.62820967904942	1.290429613920625	1.1708837234972955	0.10359883398014125	0.12532353759433715	1128.6993832394703	1381549.2047279724	0.033255384568218326	0.04859029281644401	3.1422594401853784e-08	7.502757960356092	-0.11954589042332953	
LIHPDEDISLEER	ddPTM_K562_Methotrexat_30min_R1	4	LIHPDEDISLEER	13	0	J3KS31;J3QRS9;X6R4W8;O43670-3;O43670-2;O43670;O43670-4	J3KS31	ZNF207	BUB3-interacting and GLEBS motif-containing protein ZNF207	0	;;;	184.34	1.8853e-08	58428000.0	12200.500000000002	11253.2	12739.0	13053.400000000001	11353.400000000001	11335.5	11816.0	11828.8	12018.7	12286.5	False	True	11664.180628466214	13112.60002830524	10065.257988735362	11909.028688710936	12846.571101590376	13525.924946197116	14466.038784031103	11412.774399372329	11459.953260303715	10061.295791380764	1.1593119683906519	1.303271497050951	1.0003938058712072	1.1836476071912203	1.2768306754877121	1.344352181533556	1.4377908257526593	1.1343245080965951	1.1390136517128482	1.0	13.296528500936637	-9.922177936602692	2.030613546911038	1.0085359109091452	1.238523395306964	0.2889500938915669	0.11429022261422186	0.417470264608223	3.7874710788628994	0.11706136597238602	0.03300304832401527	1.1962503101872493e-10	9.922177936602692	0.2299874843978189	
LIHPDEDISLEERR	ddPTM_K562_Methotrexat_30min_R1	3	LIHPDEDISLEERR	14	1	J3KS31;J3QRS9;X6R4W8;O43670-3;O43670-2;O43670;O43670-4	J3KS31	ZNF207	BUB3-interacting and GLEBS motif-containing protein ZNF207	0	;;	162.93	3.8703e-06	80509300.0	4610.18	4072.76	5442.02	5484.719999999999	4094.75	4101.860000000001	4284.92	4809.65	4504.48	4859.29	False	True	4407.522007273668	4745.714364916686	4299.81437160355	5003.883113177151	4633.281397487727	4894.486392290422	5245.922385449439	4640.491883364431	4295.06770798613	3979.225493517167	1.107633134753049	1.1926226278576721	1.0805656474127132	1.2575017729780142	1.1643676401440755	1.23000980976433	1.3183274971463508	1.1661796726334255	1.079372786232779	1.0	11.958271940205744	-9.894625807655192	2.767453475738999	1.0036207599650218	1.194094552120168	0.4809548664337645	0.06513930493401626	0.21278324075508787	3.295753176725737	0.06410205797712643	0.017461100264850635	1.2746008164852954e-10	9.894625807655192	0.19047379215514626	
LIHTLDDR	ddPTM_K562_Methotrexat_30min_R1	2	LIHTLDDR	8	0	H7C3A1;Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5	H7C3A1	SRRT	Serrate RNA effector molecule homolog	0	;	174.16	7.825100000000001e-13	21532200.0	7664.8	7115.5	8298.0	7819.700000000001	6758.7	6345.8	6335.2	8401.1	8216.2	7697.9	False	True	7327.86456957238	8291.21543217982	6556.363198879511	7134.159041867477	7647.587516014482	7572.036039308159	7756.029866671784	8105.628551211192	7834.230655337721	6303.73571582387	1.1624637992322082	1.315286015460151	1.0400758366854572	1.1317351112863199	1.2131833980313016	1.2011982070093064	1.2303862687647755	1.2858452379061742	1.2427917362829703	1.0	12.621991335721797	-7.790814867250762	23.77754143190989	1.2118822556707765	1.1645745844944273	0.011136032461022793	0.09543322903681381	414.0433990734473	335137.77104400477	0.029258526195646464	0.033182970646755974	1.618769946163976e-08	7.790814867250762	-0.04730767117634915	
LIHTLDDRTQLWASEPGT(ph)PPLPTSLPSQNPILK	ddPTM_K562_Methotrexat_30min_R1	2	LIHTLDDRTQLWASEPGTPPLPTSLPSQNPILK	33	1	H7C3A1;Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5	H7C3A1	SRRT	Serrate RNA effector molecule homolog	1	LIHT(0.036)LDDRT(0.031)QLWAS(0.224)EPGT(0.684)PPLPT(0.016)S(0.008)LPSQNPILK;LIHTLDDRTQLWAS(0.018)EPGT(0.973)PPLPT(0.007)S(0.002)LPSQNPILK	98.11200000000001	6.2913e-10	88875000.0	3891.7000000000003	2616.0	3996.1000000000004	5101.8	2570.5	2457.3	3077.2	3710.4	3969.8	6585.799999999999	True	False	3720.6255277900063	3048.249535602896	3157.373219937626	4654.5331150554985	2908.5658055417816	2932.1384473812495	3767.340432144595	3579.9031289252584	3785.2448644823257	5393.047802293204	0.6898929258902435	0.5652183417151865	0.5854524817293598	0.8630617205129022	0.5393176385911166	0.5436885699649205	0.6985549860215713	0.6637996287373961	0.7018748958377086	1.0	12.396885106165985	-10.626022396630672	0.9805981133466958	1.00154793550325	0.6366927925378845	0.5772694402423149	0.09133138470176863	1.9153472129789832	2.3826147100110218	0.09448266003291414	0.028890932187462443	2.3657976898029986e-11	10.626022396630672	-0.3648551429653655	
LIIES(ph)PSNTSSTEPA	ddPTM_K562_Methotrexat_30min_R1	2	LIIESPSNTSSTEPA	15	0	P38432	P38432	COIL	Coilin	1	LIIES(0.734)PS(0.266)NTSSTEPA;LIIES(0.791)PS(0.209)NTSSTEPA	184.34	4.1431999999999996e-06	61497000.0	4540.5	4229.8	5088.4	4286.0	4008.8	3230.0	3314.0	4293.0	4176.9	4634.8	True	False	4340.905056641191	4928.702555693092	4020.414377100323	3910.2530344442876	4536.02746596222	3854.1517865305177	4057.24886004393	4142.012756704434	3982.716830685733	3795.392807869745	1.1437301160608004	1.2986014373725507	1.0592880844280455	1.0302630669311434	1.195140449377669	1.0154816593789544	1.0689931360019513	1.091326501993673	1.0493556351868434	1.0	11.890033491156322	-3.000000000000273	0.2349704145104756	1.0220335022529297	2.1435747354991057	0.3501604707854922	0.07094068609201214	55.22412552806996	0.7301678311350468	0.09978728486910436	23.994591783550877	0.0009999999999993712	3.000000000000273	1.121541233246176	
LIIESPS(ph)NT(ph)SSTEPA	ddPTM_K562_Methotrexat_30min_R1	2	LIIESPSNTSSTEPA	15	0	P38432	P38432	COIL	Coilin	2	LIIES(0.277)PS(0.723)NT(0.515)S(0.42)S(0.037)T(0.029)EPA;LIIES(0.3)PS(0.7)NT(0.24)S(0.126)S(0.366)T(0.268)EPA	111.12	0.020932	59543000.0	3989.5	3944.1	4157.2	4461.9	4174.5	3562.2	3473.6000000000004	4446.3	4155.0	4630.3	True	False	3814.126356892419	4595.795486762761	3284.6605314993835	4070.7321545466525	4723.5199203400725	4250.54473497802	4252.643222766627	4289.921108813167	3961.8349569056522	3791.707801475632	1.00591252190057	1.2120647811981187	0.8662746982299324	1.073588042032783	1.2457499806556307	1.1210106256932089	1.121564067017931	1.1313954907452635	1.0448682135695717	1.0	11.888632075479318	-7.526303406961168	24.999757778363428	1.1221396961413073	1.0337236217116539	0.11738301144222185	0.09842455695997443	197.9942646163966	1445329.3939529401	0.028364324452286954	0.03679356579292056	2.9764363039445994e-08	7.526303406961168	-0.08841607442965338	
LIIESPS(ph)NTSS(ph)TEPA	ddPTM_K562_Methotrexat_30min_R1	1	LIIESPSNTSSTEPA	15	0	P38432	P38432	COIL	Coilin	2	LIIES(0.236)PS(0.764)NT(0.011)S(0.031)S(0.558)T(0.4)EPA	147.18	1.2742e-08	46532000.0	4152.7	3361.7	4589.8	4520.7	3898.4	3606.8	3935.2	4057.6	4559.3	4783.7	True	False	3970.152280302583	3917.1637858701283	3626.4637033281715	4124.377249839543	4411.107930878846	4303.763053764168	4817.768773097429	3914.891908130424	4347.339138151611	3917.325574999241	1.0134854007643601	0.9999586990853798	0.9257498857058554	1.0528553654467032	1.126050885081131	1.0986482924041876	1.2298617209263651	0.9993787427615543	1.109772229782676	1.0	11.935653322554353	-7.494124771665871	5.5922736320335895	1.1003156462521306	0.9820688399571451	0.3789368038930546	0.06503826523504107	0.18463315368774777	17.138609700824787	0.018489546472816358	0.026547069509907498	3.205348304045531e-08	7.494124771665871	-0.11824680629498552	
LIIESPS(ph)NTSSTEPA	ddPTM_K562_Methotrexat_30min_R1	2	LIIESPSNTSSTEPA	15	0	P38432	P38432	COIL	Coilin	1	LIIES(0.371)PS(0.629)NTSSTEPA;LIIES(0.029)PS(0.971)NTSSTEPA	225.23	1.3217999999999999e-36	64061000.0	5261.4	5247.4	6380.700000000001	5638.5	4688.700000000001	4662.0	4706.2	5798.9	5380.0	5195.2	True	False	5030.115155822474	6114.443659450549	5041.478267424741	5144.181459336	5305.346233201228	5562.865519753956	5761.685149408187	5594.949400152194	5129.884974284577	4254.298937482713	1.1823605321911899	1.4372388375388805	1.1850315037823378	1.2091725416878756	1.247055345936838	1.307586890695915	1.3543207080829633	1.315128410666588	1.2058120620268287	1.0	12.05470569559848	-10.105128044211972	4.068137664638515	1.0000601899376989	1.2812864240090485	0.5550530905864353	0.07549870332283296	0.3851410061067882	13.089505650804554	0.07273643123116501	0.01908871270355514	7.850041555981742e-11	10.105128044211972	0.2812262340713496	
LILIESR	ddPTM_K562_Methotrexat_30min_R1	2	LILIESR	7	0	P62277	P62277	RPS13	40S ribosomal protein S13	0	;	143.02	5.3532e-07	21997000.0	7482.3	6350.799999999999	8431.599999999999	7781.0	6618.0	6343.9	6445.6	8110.200000000001	7527.9	8087.8	False	True	7153.38705105305	7400.161754857364	6661.922384631532	7098.8518107818445	7488.3829998348565	7569.768891198433	7891.189876976208	7824.959669094883	7177.9295721035005	6623.021047615628	1.0800791662331135	1.1173393080974001	1.0058736544450373	1.0718449722181573	1.1306597013655528	1.1429480348584498	1.1914789067169185	1.181478907108708	1.0837848046229064	1.0	12.693273727710123	-7.764025080156316	5.397427981717347	1.1357311375461747	1.067284017115631	0.14535917509246687	0.05728840189099453	0.2509899342217156	22.384473072705866	0.017266612774271183	0.020959535835288104	1.7217691413346513e-08	7.764025080156316	-0.06844712043054368	
LIPGPLS(ph)PVAR	ddPTM_K562_Methotrexat_30min_R1	7	LIPGPLSPVAR	11	0	P48634-2;P48634-3;P48634	P48634-2	PRRC2A	Protein PRRC2A	1	LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR	120.77	0.0022521999999999998	3480139200.0	32610.030000000002	30130.41	37059.950000000004	33783.57	28184.980000000003	26030.229999999996	26795.670000000006	31596.760000000002	30056.740000000005	30555.629999999997	True	False	31176.5321273474	35108.94812309816	29281.5729491823	30821.8168704762	31891.798894331438	31060.20354746138	32805.28109885737	30485.48404158594	28659.408717839804	25021.709316891553	1.2459793107060386	1.4031394769420071	1.1702467077025396	1.2318030107427207	1.2745651582165114	1.241330204667248	1.3110727442074197	1.2183613699406988	1.1453817305156098	1.0	14.610892727757006	-10.005053263183058	1.6853095016184656	1.0012632459783344	1.2677468463086483	0.6780575645890099	0.05740320193353352	0.22309673376471936	1.4387966184136767	0.05450795488376246	0.01573867924751045	9.88431862962828e-11	10.005053263183058	0.26648360033031393	
LIPNATGTGT(ph)FSPGASPGSEAR	ddPTM_K562_Methotrexat_30min_R1	2	LIPNATGTGTFSPGASPGSEAR	22	0	Q16512;Q16512-2;K7EN76;Q16512-3	Q16512	PKN1	Serine/threonine-protein kinase N1	1	LIPNATGTGT(0.669)FS(0.331)PGASPGSEAR;LIPNAT(0.222)GT(0.025)GT(0.474)FS(0.279)PGASPGSEAR	245.92	3.4249999999999996e-77	21717000.0	1725.02	1977.51	2264.3	2495.95	1590.8600000000001	1489.5700000000002	1853.62	1989.96	2077.09	2333.2	True	False	1649.1901862806276	2304.259915577249	1789.054373490344	2277.133938712369	1800.0859744813067	1777.4083209480677	2269.341470113044	1919.971978879935	1980.5265392633373	1910.6348708297403	0.8631634497304166	1.2060179319225799	0.9363664407074299	1.1918205688999424	0.9421402288651703	0.930271057062925	1.1877420980637323	1.0048869138697023	1.0365803375101412	1.0	10.899836385126157														
LIPNATGTGTFSPGAS(ph)PGSEAR	ddPTM_K562_Methotrexat_30min_R1	1	LIPNATGTGTFSPGASPGSEAR	22	0	Q16512;Q16512-2;K7EN76;Q16512-3	Q16512	PKN1	Serine/threonine-protein kinase N1	1	LIPNATGTGT(0.003)FS(0.002)PGAS(0.913)PGS(0.082)EAR	114.37	1.3588e-05	7977800.0	753.15	964.37	793.64	969.17	704.81	656.45	725.2	927.05	792.65	809.66	True	False	720.042427796347	1123.7157510127536	627.065809732313	884.2043708334967	797.5048688597163	783.2996719095846	887.844560441719	894.4451260430577	755.7998745105334	663.0227282341885	1.0859996152982834	1.694837451508664	0.9457681962160804	1.3335958681060234	1.202831871214567	1.1814069692538693	1.3390861619575134	1.3490414249074243	1.1399305669708124	1.0	9.372914516143856	-10.00510568859248	5.199970269397467	1.0002287944853085	1.269227147534766	0.17074196452629153	0.18627721124314678	0.23784636665032416	24.287926717445984	0.1675070561415138	0.04361757777064923	9.883125526336597e-11	10.00510568859248	0.2689983530494575	
LIRDFQEYVEPGEDFPAS(ph)PQRR	ddPTM_K562_Methotrexat_30min_R1	4	LIRDFQEYVEPGEDFPASPQRR	22	2	Q9Y6G9;C9JGM7	Q9Y6G9	DYNC1LI1	Cytoplasmic dynein 1 light intermediate chain 1	1	LIRDFQEYVEPGEDFPAS(1)PQRR;LIRDFQEYVEPGEDFPAS(1)PQRR;LIRDFQEYVEPGEDFPAS(1)PQRR;LIRDFQEYVEPGEDFPAS(1)PQRR	127.37	5.1977e-07	502682000.0	3810.4700000000003	3105.7999999999997	4398.799999999999	4633.889999999999	3508.6000000000004	3943.9700000000003	3648.13	4002.2700000000004	4108.53	5350.6900000000005	True	False	3642.966301327951	3618.980660426401	3475.551993158734	4227.644058278354	3970.04239849208	4706.08638437237	4466.316018042263	3861.507895591768	3917.5253370627156	4381.62819175381	0.8314184001700521	0.8259442613677934	0.7932101586573904	0.96485686901384	0.9060655593652763	1.074049686194093	1.0193279353204443	0.8812952004597505	0.894079818190751	1.0	12.097251352588813	-7.26689803083118	24.590191420011074	0.9624901557015554	0.817766268845849	0.5799296390372182	0.05692209323637302	271.14577325029404	1221461.6157143628	0.017306672705411138	0.02652921106169424	5.408813030130634e-08	7.26689803083118	-0.14472388685570636	
LISS(ph)VEDFTEFV	ddPTM_K562_Methotrexat_30min_R1	2	LISSVEDFTEFV	12	0	P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4	P49815	TSC2	Tuberin	1	LIS(0.007)S(0.993)VEDFTEFV;LIS(0.076)S(0.924)VEDFTEFV	180.07	2.4055999999999995e-66	10752000.0	750.0	586.17	910.86	789.1600000000001	649.08	560.53	646.7	679.96	802.8900000000001	832.31	True	False	717.0308980246431	683.0246293135888	719.6829336383939	719.9755680499425	734.4453970282275	668.8444894439476	791.7389371727244	656.0454213950028	765.5638191456029	681.5705937512005	1.052027338911847	1.0021333601768023	1.0559184041046024	1.056347757152154	1.077577882264575	0.9813282667651322	1.1616389328289296	0.9625494811686148	1.1232348140669097	1.0	9.412719281845966	-6.805701896171257	24.800377304683536	1.0534010559359028	1.0270801934856908	0.028263886252345105	0.05893776873790513	428.5919826728362	240139.13073346397	0.014067027877689296	0.029283178723160715	1.5642209702557844e-07	6.805701896171257	-0.026320862450212035	
LISWYDNEFGYSNR	ddPTM_K562_Methotrexat_30min_R1	2	LISWYDNEFGYSNR	14	0	P04406;P04406-2;E7EUT5	P04406	GAPDH	Glyceraldehyde-3-phosphate dehydrogenase	0	;	218.02	1.0891e-25	112397000.0	3502.1000000000004	2280.8	2791.5	3038.5	2738.8	2349.2	3072.4	5362.5	4818.0	5683.1	False	True	3348.1518772961394	2657.6634330287015	2205.602298104621	2772.1194225755858	3099.0002054922506	2803.1496522964344	3761.4639099574465	5173.897835506065	4594.012231617672	4653.83551963505	0.7194392374139382	0.5710694806070656	0.4739321552725572	0.5956633857985967	0.6659023922133096	0.602331053701755	0.8082502903438274	1.111749182728271	0.9871453798130645	1.0	12.184204507180135	-8.98808616816877	2.836805096276891	1.0363936874483508	0.5985889364341044	0.8856759133704465	0.06885750978105834	0.08455253864072602	1.3760046846064553	0.03645369617536116	0.02104942716344415	1.0278123501180074e-09	8.98808616816877	-0.43780475101424643	
LITPPPPPPS(ph)PER	ddPTM_K562_Methotrexat_30min_R1	1	LITPPPPPPSPER	13	0	J3QKY4;J3QR53;Q96HE9	J3QKY4	PRR11	Proline-rich protein 11	1	LIT(0.003)PPPPPPS(0.997)PER	93.71600000000001	0.011874	19508000.0	1453.4	1274.3	1455.8	1362.9	1384.5	1128.8	1544.1	1471.1	1370.0	1413.8	True	False	1389.5102762520216	1484.8564156035052	1150.247474684115	1243.4166730387587	1566.5860174178542	1346.9246243454008	1890.403731078404	1419.360579172583	1306.3089990278565	1157.747119997895	1.2001846104825966	1.2825395027596398	0.9935222077565665	1.0739967749097226	1.3531331586648236	1.163401403536076	1.6328295691047292	1.2259677045667483	1.1283198001220092	1.0	10.177104452871975	-7.758220417820305	24.999805258055403	1.2766576793487496	1.1376279288656934	0.08235975654562133	0.1721554812100028	184.21843724645692	1430706.4018846457	0.05208615633129546	0.06443932447922332	1.744936319241755e-08	7.758220417820305	-0.1390297504830562	
LITPPPPPPSPERVGISS(ph)IDISQSR	ddPTM_K562_Methotrexat_30min_R1	1	LITPPPPPPSPERVGISSIDISQSR	25	1	J3QKY4;J3QR53;Q96HE9	J3QKY4	PRR11	Proline-rich protein 11	1	LITPPPPPPS(0.085)PERVGIS(0.361)S(0.527)IDIS(0.018)QS(0.01)R	64.34899999999999	0.0025478000000000002	15993000.0	1633.2	1809.9	2217.7	2172.7	1798.9	1463.8	1466.9	1826.5	1844.9	2215.3	True	False	1561.406483538463	2108.9552119601226	1752.2350766636646	1982.2227643343672	2035.4868809916788	1746.6586331651292	1795.889665901763	1762.2609597299438	1759.1310016835707	1814.0877033040997	0.8607116848290112	1.1625431384155045	0.9659042798604612	1.092682983697003	1.1220443627308274	0.9628303140933274	0.9899684908457339	0.9714309603225021	0.9697055982902959	1.0	10.825028490287771	-8.310557738495014	24.999034197155297	0.9777003232783067	1.0462662341873776	0.12994141641982282	0.07954735934966184	724.7744846626588	368875.3392628444	0.0265119200436015	0.02338139820007652	4.891502293654909e-09	8.310557738495014	0.06856591090907094	
LIVAYVDDLDRR	ddPTM_K562_Methotrexat_30min_R1	2	LIVAYVDDLDRR	12	1	O14776-2;O14776	O14776-2	TCERG1	Transcription elongation regulator 1	0	;	144.17	1.4395e-08	11695800.0	4727.8	3795.4	5140.0	5378.200000000001	4570.200000000001	4560.3	4158.8	4965.5	4953.6	5210.8	False	True	4519.971572907879	4422.525339230593	4061.1842422560476	4906.701556194183	5171.261406141626	5441.513434091367	5091.516764982107	4790.8605505278065	4723.308217214884	4267.073626315623	1.0592673032479683	1.0364305204288669	0.951749277821262	1.1498984985714535	1.2118987997417607	1.275233077895074	1.1932104319883376	1.1227508522426044	1.1069197841081533	1.0	12.059031288429148	-7.358948222622099	6.500433104566362	1.1670371693799353	1.0184310115703252	0.40500406541392686	0.0737838706325482	0.22050251361518455	12.397246207754588	0.02132859437303697	0.031803186340389866	4.3757427044882535e-08	7.358948222622099	-0.14860615780961006	
LKATVTPS(ph)PVKGK	ddPTM_K562_Methotrexat_30min_R1	1	LKATVTPSPVKGK	13	2	Q9H1E3;Q9H1E3-2	Q9H1E3	NUCKS1	Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1	1	LKAT(0.018)VT(0.112)PS(0.869)PVKGK	116.58	0.026522000000000004	22956000.0	3282.9	1957.7	5813.6	3731.4	1879.5	2068.1	1280.0	2347.5	2344.4	5042.4	True	False	3138.5876468334695	2281.1766497896747	4593.404807544699	3404.2739553722386	2126.687193742764	2467.7310556420302	1567.0725832396583	2264.937094424335	2235.4093557086903	4129.17249814499	0.7601008793513626	0.5524537061153251	1.112427443902686	0.8244445968051932	0.5150395617277234	0.5976333167845728	0.3795125013410454	0.5485208223782966	0.5413698160377017	1.0	12.011636973706596	-7.755948838898628	24.933446440369824	0.563594727019571	0.815225841375986	0.21181925219590003	0.19724983873113408	176.04338359875942	799436.7907236483	0.05767313410162255	0.07230257707416937	1.754087126027297e-08	7.755948838898628	0.25163111435641494	
LKDLFDYS(ph)PPLHK	ddPTM_K562_Methotrexat_30min_R1	1	LKDLFDYSPPLHK	13	1	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	LKDLFDYS(1)PPLHK	124.04	0.00065188	377220000.0	5247.3	3789.4	9427.6	6652.5	3939.4	3372.1	3286.7	4835.8	5080.3	8352.4	True	False	5016.634974939613	4415.533941213153	7448.875595776869	6069.2856536725685	4457.500149523941	4023.710600420912	4023.8261401045206	4665.72217304247	4844.117961869506	6839.699423589199	0.7334583969637491	0.6455742669019304	1.0890647577416492	0.8873614581278854	0.651709947099521	0.5882876353518809	0.5883045278608133	0.6821531011949187	0.7082355030343582	1.0	12.739717210705209	-7.765703349519281	24.980120425498075	0.6757408539990677	0.842929697935869	0.1440963193358913	0.15349315257807294	173.2530601875033	1014988.0894368445	0.047632358386314286	0.05592549975326109	1.7151284482213505e-08	7.765703349519281	0.16718884393680133	
LKNGFPHPEPDCNPSEAAS(ph)EES(ph)NSEIEQEIPVEQK	ddPTM_K562_Methotrexat_30min_R1	1	LKNGFPHPEPDCNPSEAASEESNSEIEQEIPVEQK	35	1	Q9NR30;Q9NR30-2	Q9NR30	DDX21	Nucleolar RNA helicase 2	2	LKNGFPHPEPDCNPS(0.03)EAAS(0.657)EES(0.657)NS(0.657)EIEQEIPVEQK	59.792	0.0013008	21778000.0	1192.2	936.59	2023.7	1351.0	1007.2	801.74	863.34	946.53	1090.5	1474.0	True	False	1139.792315499973	1091.3455781920172	1598.9530254968029	1232.559927562817	1139.6644541302014	956.6649081526243	1056.9659718860369	913.2400034016885	1039.8028930218084	1207.0443166479681	0.9442837348882452	0.9041470666319419	1.324684606392239	1.021138918068648	0.9441778055797616	0.7925681724837893	0.8756645943384187	0.7565919418251426	0.8614454984630565	1.0	10.237262930294825	-7.925973124340251	2.9896839373867796	0.8441510856118761	1.0585454049641319	0.3550549998687902	0.12049227857445935	0.27428435503135856	4.968193746031756	0.041085002797049415	0.04670927977275859	1.18584212995032e-08	7.925973124340251	0.21439431935225572	
LKPGGVGAPSSS(ph)SPSPSPSAR	ddPTM_K562_Methotrexat_30min_R1	2	LKPGGVGAPSSSSPSPSPSAR	21	1	Q92797	Q92797	SYMPK	Symplekin	1	LKPGGVGAPSS(0.001)S(0.944)S(0.055)PS(0.001)PSPSAR;LKPGGVGAPS(0.001)S(0.001)S(0.817)S(0.162)PS(0.012)PS(0.004)PS(0.003)AR	160.23	2.8173e-19	53670000.0	9237.1	7205.1	12287.8	7964.900000000001	6427.299999999999	6123.2	5832.4	8181.6	8019.2	9650.7	True	False	8831.048144191245	8395.620309240227	9708.758702722538	7266.6295833050135	7272.602607258775	7306.4217397163	7140.464167567959	7893.848490624972	7646.389142338824	7902.864712804977	1.1174489840225073	1.0623515161074237	1.2285113127384655	0.9194931012207416	0.9202489061308374	0.9245282571872624	0.9035285845142074	0.9988591197612942	0.9675465062623954	1.0	12.948159995900838	-7.276504164381746	24.999885584672825	0.9437407544555769	1.128728697374563	0.7527258997881094	0.049381725563355454	370.70568348967066	615181.9424988474	0.013870672369842789	0.02066300955026656	5.2904892421801214e-08	7.276504164381746	0.18498794291898601	
LKQLMEQDASS(ph)SPSAQVIGLK	ddPTM_K562_Methotrexat_30min_R1	1	LKQLMEQDASSSPSAQVIGLK	21	1	Q9H4L5-7;Q9H4L5-5;Q9H4L5-3;Q9H4L5;Q9H4L5-8;Q9H4L5-6;Q9H4L5-4;Q9H4L5-2	Q9H4L5-7	OSBPL3	Oxysterol-binding protein-related protein 3	1	LKQLMEQDAS(0.08)S(0.649)S(0.19)PS(0.08)AQVIGLK	47.729	0.032423	0.0	1230.3	910.37	1448.0	1408.0	889.83	778.82	896.7	799.68	1182.5	1396.9	True	False	1176.2174851196244	1060.7931688558133	1144.084588090809	1284.5628260610247	1006.8582418771606	929.3159425342717	1097.8078010867207	771.5548011370612	1127.5258331025116	1143.9078737622435	1.028244941833573	0.9273414347319151	1.0001544830074331	1.1229600350910913	0.8801917225778549	0.8124045334855577	0.9596994882779306	0.6744903316378654	0.9856788811096715	1.0	10.159755151972224	-7.88826846869652	9.500459663532451	0.8680397568847272	1.0114933255614222	0.29211541197711877	0.10006871990230173	0.33616566880490056	26.854627485879355	0.02969167185146787	0.033694760967379445	1.29339605302317e-08	7.88826846869652	0.143453568676695	
LKRS(ph)Y(ph)SSPDITQAIQEEEK	ddPTM_K562_Methotrexat_30min_R1	1	LKRSYSSPDITQAIQEEEK	19	2	P40818;P40818-2	P40818	USP8	Ubiquitin carboxyl-terminal hydrolase 8	2	LKRS(0.963)Y(0.791)S(0.116)S(0.116)PDIT(0.014)QAIQEEEK	50.387	0.031322	0.0	225.63	180.73	266.16	375.51	339.47	362.18	285.84	218.08	398.95	277.58	True	False	215.71157536173365	210.59256061525653	210.29665329160895	342.589621316886	384.11625520609556	432.1661591472516	349.94689624470647	210.41000279107934	380.40290157822164	227.30757219480512	0.948985435368015	0.9264652232296792	0.9251634305934269	1.5071632590544888	1.689852438690004	1.9012396066457495	1.5395303062970471	0.9256620919375076	1.6735161873631386	1.0	7.828501934581311	-7.260866720605834	24.99998907445139	1.4902990141624282	0.9328307213354288	0.4197379901852646	0.28364390739491663	49.57112744679163	2164027.5703409705	0.08141094027029121	0.13086815643916244	5.484452498948783e-08	7.260866720605834	-0.5574682928269994	
LLAAGS(ph)PLAHSR	ddPTM_K562_Methotrexat_30min_R1	5	LLAAGSPLAHSR	12	0	Q8IZN3-2;Q8IZN3	Q8IZN3-2	ZDHHC14	Probable palmitoyltransferase ZDHHC14	1	LLAAGS(1)PLAHSR;LLAAGS(1)PLAHSR;LLAAGS(1)PLAHSR;LLAAGS(1)PLAHSR;LLAAGS(1)PLAHSR	121.13	0.00088575	264957700.0	31692.600000000002	28276.9	34041.4	32976.600000000006	27710.399999999998	26822.5	26739.8	30729.199999999997	31809.6	34665.200000000004	True	False	30299.43125164776	32949.17709988132	26896.575343255834	30085.592677474444	31354.803305926842	32005.568512140817	32736.88082914987	29648.43661852365	30330.778639033928	28386.996367344054	1.0673701035345795	1.1607137533503027	0.947496346397438	1.0598371271179796	1.1045481142202458	1.1274728787072206	1.1532351082698504	1.0444372569346836	1.068474390405248	1.0	14.792942584892689	-5.9955740894557685	18.94201409371707	1.0783457066251456	1.0541060018176762	0.0	0.06351563701979082	14533.959982556165	597.6854710800083	0.015520528597965932	8422.192596584615	1.010243141098233e-06	5.9955740894557685	-0.024239704807469398	
LLAAVEAFYS(ph)PPSHDRPR	ddPTM_K562_Methotrexat_30min_R1	1	LLAAVEAFYSPPSHDRPR	18	1	J3QK89;Q8IWX8	J3QK89	CHERP	Calcium homeostasis endoplasmic reticulum protein	1	LLAAVEAFY(0.393)S(0.52)PPS(0.087)HDRPR	69.07	0.024534	5675300.0	1963.2	1652.3	1998.9	2206.2	1864.0	1840.1	1923.7	2524.8	2633.2	3125.9	True	False	1876.900078669305	1925.3144907020874	1579.3582065847504	2012.785871346473	2109.1486720598627	2195.6732824751703	2355.138694045416	2436.001352929737	2510.7831067446373	2559.7692194096894	0.7332301929554956	0.7521437776902739	0.6169924204920971	0.7863153662776847	0.8239604789631213	0.8577622020869196	0.9200589944544049	0.9516488183616434	0.9808630745718753	1.0	11.32179803198838	-8.33967410117162	0.7887699666270239	0.9888896231657557	0.7007682905527789	0.8842096716845617	0.0397662035079858	0.21080933506532118	0.28223275023053845	0.029054017222960547	0.0258098101777927	4.574313217933076e-09	8.33967410117162	-0.2881213326129768	
LLAAVEAFYSPPS(ph)HDRPR	ddPTM_K562_Methotrexat_30min_R1	1	LLAAVEAFYSPPSHDRPR	18	1	J3QK89;Q8IWX8	J3QK89	CHERP	Calcium homeostasis endoplasmic reticulum protein	1	LLAAVEAFYS(0.026)PPS(0.974)HDRPR	77.357	0.0095779	7162200.0	1206.7	1292.9	1468.1	1144.2	1167.0	1309.7	976.1	1330.9	1464.2	1564.5	True	False	1153.6549128617828	1506.5297494575616	1159.9658727735614	1043.889762485103	1320.4809550932735	1562.780989108055	1195.0152722658054	1284.091492638699	1396.12966158875	1281.1538896850377	0.900481138253735	1.175916306063693	0.9054071350153965	0.8148043501173271	1.0306965975944575	1.2198230061903441	0.9327648160671714	1.0022929352806973	1.089743919781548	1.0	10.323228064440677	-7.977742937213674	24.999661555377042	1.0510806838752744	0.9572906910139142	0.15435658226313087	0.11089440381320156	505.24172079291145	567497.1179083566	0.03566431988066958	0.040437109758176285	1.0525847237776666e-08	7.977742937213674	-0.09378999286136025	
LLADQAEARR	ddPTM_K562_Methotrexat_30min_R1	2	LLADQAEARR	10	1	J3QR09;J3KTE4;P84098	J3QR09	RPL19	Ribosomal protein L19;60S ribosomal protein L19	0	;	120.63	0.004775199999999999	10560200.0	3224.4	2767.2	3698.1	4051.7	3119.0	3334.6000000000004	3004.6000000000004	3087.0	2964.1000000000004	3922.5	False	True	3082.6592367875464	3224.4327656423284	2921.9193475266707	3696.4937516700684	3529.203169610897	3978.96425615005	3678.458034063968	2978.4284602717444	2826.299637969687	3212.0972401978647	0.9597029623541705	1.0038403337514477	0.9096609252547662	1.1508038129762115	1.098722394031103	1.2387433999055852	1.145188877855197	0.9272535161757038	0.8798923029477113	1.0	11.649299853055215	-9.280958556150289	23.532039403410618	0.9276796072150856	1.0739138029109663	0.29955005486395303	0.09551122434623466	534.4198789261412	644282.1289978568	0.05790819814226799	0.02789737208770284	5.236504051074204e-10	9.280958556150289	0.1462341956958807	
LLAEALNQVTQRAS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LLAEALNQVTQRASR	15	1	Q05655;Q05655-2	Q05655	PRKCD	Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit	1	LLAEALNQVT(0.002)QRAS(0.998)R	101.54	0.0018989	35289000.0	696.94	534.85	1009.9	835.39	831.53	734.32	631.1	902.44	857.05	1091.0	True	False	666.3033520923932	623.2248716044377	797.935791100074	762.1526557266475	940.8907699988938	876.2169473328446	772.6402400644916	870.700673692139	817.205932567025	893.4093279938481	0.7457985172245496	0.6975804394206293	0.8931357286047593	0.8530833872510177	1.053146346828128	0.9807564347916435	0.8648222218582118	0.9745820268602955	0.914704947621335	1.0	9.803177507523362	-6.966005971509952	1.69534231057956	0.9542498624580352	0.7117214477169774	0.6897129274696734	0.05945971984460335	0.2200819428601005	1.2020671893768946	0.017758499009456936	0.05572160856060806	1.0814190817808835e-07	6.966005971509952	-0.2425284147410578	
LLAS(ph)PSSR	ddPTM_K562_Methotrexat_30min_R1	1	LLASPSSR	8	0	C9JZP1;C9J470;E9PHA2;Q15003	C9JZP1	NCAPH	Condensin complex subunit 2	1	LLAS(0.982)PS(0.016)S(0.002)R	101.46	0.014997	25778000.0	2302.1	2384.0	2752.6	2498.0	2314.3	2461.0	1986.2	2514.8	2490.0	2722.6	True	False	2200.9024404567085	2777.915478928633	2174.866876504668	2279.0042183952	2618.671014886343	2936.553420015977	2431.655910023915	2426.35305859779	2374.2404434885857	2229.510757466592	0.9871683431380294	1.2459753646065368	0.9754906403663124	1.0221992474191277	1.1745496208602986	1.3171290652810315	1.090667942229183	1.0882894601301996	1.0649154463764288	1.0	11.122511445384218	-6.036583364744597	18.79614764577836	1.1129157968586851	0.9613601159960631	0.11002093710072847	0.1031878075129638	21475179.110115685	1449156118.142543	0.026505482769058893	27143563.76585648	9.192140106773776e-07	6.036583364744597	-0.15155568086262206	
LLAS(ph)SPALPSSGAQAR	ddPTM_K562_Methotrexat_30min_R1	1	LLASSPALPSSGAQAR	16	0	Q9NYZ3	Q9NYZ3	GTSE1	G2 and S phase-expressed protein 1	1	LLAS(0.5)S(0.5)PALPSSGAQAR	211.75	3.3526e-22	17929000.0	2561.9	2378.4	2918.5	2664.1	2374.6	2206.8	2234.7	2609.1	2877.6	2491.2	True	False	2449.2819435324445	2771.3901741123573	2305.9467336623097	2430.542489282086	2686.901521820468	2633.232867651872	2735.8883607544267	2517.3364741480436	2743.82100408946	2040.0195397784369	1.2006169037961554	1.358511582890698	1.1303552190057722	1.1914309847963824	1.3170959735573358	1.2907880617348708	1.3411088998939524	1.2339766482930097	1.344997413302944	1.0	10.99436725539143	-12.11301329714164	4.692914972733493	0.9999853403108788	1.267350365595287	0.5492922322330941	0.07273395807282101	1.4018437155433814e-05	2.6494986272566743e-06	0.07055349450882023	0.017110559831894405	7.708798660574409e-13	12.11301329714164	0.2673650252844081	
LLASS(ph)PALPSSGAQAR	ddPTM_K562_Methotrexat_30min_R1	2	LLASSPALPSSGAQAR	16	0	Q9NYZ3	Q9NYZ3	GTSE1	G2 and S phase-expressed protein 1	1	LLAS(0.013)S(0.986)PALPSSGAQAR;LLAS(0.167)S(0.833)PALPSSGAQAR	132.24	5.9231e-05	46989000.0	4465.1	4142.2	5623.4	5050.6	4100.5	4303.0	4507.700000000001	5230.1	5099.0	5338.8	True	False	4268.819550359782	4826.6281446385	4443.125188307911	4607.8217395623715	4639.787623273322	5134.493850600871	5518.666471460478	5046.154418551102	4861.948602951124	4371.891585970266	0.9764239269012869	1.1040136860043646	1.0162935427233009	1.0539652342590615	1.0612769168756966	1.1744330227853441	1.2623063410744906	1.1542267961869406	1.1120926736960925	1.0	12.094041910209336	-8.182476072957233	4.699519878457321	1.1577457511429983	1.0431215657696626	0.325749352870523	0.06877945480241872	0.23533641600986882	9.484100811639887	0.022707246043787307	0.022575781563889907	6.569373088175158e-09	8.182476072957233	-0.11462418537333563	
LLDDLFR	ddPTM_K562_Methotrexat_30min_R1	1	LLDDLFR	7	0	S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5;G3V3B0;Q9UKV3-3;Q9UKV3-2	S4R3H4	ACIN1	Apoptotic chromatin condensation inducer in the nucleus	0		124.34	0.017247	2785900.0	3290.3	2941.1	3652.1	3054.6	2706.1	2553.3	2688.5	3409.7	3296.5	3692.2	False	True	3145.6623516939776	3427.066784847734	2885.574118899475	2786.807960572449	3061.9995823289687	3046.689088714666	3291.4645625311114	3289.778918363644	3143.246434522137	3023.5068018504912	1.0404019431240317	1.133474144245434	0.954379899900805	0.9217138055938308	1.0127311704590571	1.007667350657186	1.088624824828117	1.0880673118877011	1.0396028983954528	1.0	11.562007109222888	-8.74316071186597	24.70965619548484	1.0614126996502609	1.0106092565979847	0.1107678392377629	0.057235339976398306	446.6159316629829	603748.85379115	0.023830494393158194	0.018422740218241595	1.8065054999826394e-09	8.74316071186597	-0.05080344305227613	
LLDEEEATDNDLR	ddPTM_K562_Methotrexat_30min_R1	1	LLDEEEATDNDLR	13	0	Q8WUM4;Q8WUM4-2	Q8WUM4	PDCD6IP	Programmed cell death 6-interacting protein	0		166.11	0.00085478	6141900.0	482.82	470.84	749.35	590.51	609.21	483.79	483.48	564.55	538.49	589.51	False	True	461.5958109123445	548.6383070884045	592.0716754736518	538.7409051259209	689.3317931896943	577.275570528049	591.912697300555	544.6944565100139	513.4557174354093	482.74402653130477	0.9561916575728175	1.1364994219205045	1.2264712620638867	1.1159970409100128	1.4279447394570564	1.1958212609609868	1.2261419401782507	1.1283297701762276	1.0636189972660655	1.0	8.915114597170263	-9.764796012747945	2.0625649732226985	1.0054831410417837	1.190396941928361	0.23124088188662895	0.11100195174698581	0.457406520037056	3.7395909028883896	0.10744083802748414	0.031141178756119964	1.7187154748299802e-10	9.764796012747945	0.18491380088657738	
LLDHMAPPPVADQAS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	7	LLDHMAPPPVADQASPR	17	0	A0A0C4DFS6;Q9C004	A0A0C4DFS6	SPRY4	Protein sprouty homolog 4	1	LLDHMAPPPVADQAS(1)PR;LLDHMAPPPVADQAS(1)PR;LLDHMAPPPVADQAS(1)PR;LLDHMAPPPVADQAS(1)PR;LLDHMAPPPVADQAS(1)PR;LLDHMAPPPVADQAS(1)PR;LLDHMAPPPVADQAS(1)PR	144.08	1.0455e-09	158113000.0	13408.2	10976.4	13141.53	13283.099999999999	12203.0	10459.14	11258.300000000001	17474.1	17074.9	17968.600000000002	True	False	12818.79158252536	12790.063533100772	10383.302442633296	12118.591246343189	13807.908393318947	12480.220779124695	13783.260362411767	16859.525998585843	16281.091625912946	14714.312420706015	0.871178429274529	0.8692260411096454	0.7056600502801537	0.8235920850293948	0.9383998380983419	0.848168804786454	0.9367247322420537	1.1457909494201766	1.1064799468986506	1.0	13.844932508276013	-9.040985053659067	3.1165403007714985	1.0938111012018208	0.8415571478943253	0.7310675334958443	0.0651704089419137	0.13480821496992862	2.616799985486312	0.03525799865144555	0.019830551734580336	9.099445880382319e-10	9.040985053659067	-0.25225395330749545	
LLDPSAEIIVLKEPPTIRPNS(ph)PYDLCSR	ddPTM_K562_Methotrexat_30min_R1	1	LLDPSAEIIVLKEPPTIRPNSPYDLCSR	28	2	G3V1N5;B4E3L3;Q96RU2-2;Q96RU2	G3V1N5	USP28	Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 28	1	LLDPSAEIIVLKEPPT(0.335)IRPNS(0.483)PY(0.169)DLCS(0.014)R	43.633	0.027632999999999998	9749600.0	853.88	697.49	1138.4	1135.5	611.25	696.83	769.81	902.6	795.32	1061.5	True	False	816.3444576070434	812.7383671971194	899.4653971564759	1035.9524779774824	691.6400889466696	831.4825354204517	942.4594885185326	870.8550464014501	758.3457467933106	869.2520638546933	0.9391343334716613	0.9349858355159212	1.0347578505224384	1.1917745393477204	0.7956726451469043	0.9565493945832548	1.0842188678151667	1.001844094036025	0.8724117874744303	1.0	9.763630777105133	-7.766809576775753	24.999998517284407	0.958735183251014	1.0194072278696622	0.11429598898162541	0.09842261058956484	394.98045539088076	1838760.0293623107	0.031988973030637205	0.03735072332934522	1.7107652625150617e-08	7.766809576775753	0.06067204461864817	
LLDQQNPDEDFS(ph)	ddPTM_K562_Methotrexat_30min_R1	2	LLDQQNPDEDFS	12	0	P46108	P46108	CRK	Adapter molecule crk	1	LLDQQNPDEDFS(1);LLDQQNPDEDFS(1)	185.3	0.00030971	28463000.0	9803.900000000001	7345.2	11005.900000000001	9398.7	8803.7	8133.9	7907.4	8314.9	8907.0	10167.7	True	False	9372.9322948584	8558.869452947392	8695.911994522534	8574.73056342313	9961.540860629519	9705.661057727728	9680.83573805413	8022.460254069818	8492.915514117607	8326.231002972552	1.1257112962049893	1.027940427054184	1.0443995598270095	1.0298453838671857	1.1964045745395657	1.1656728061307338	1.1626912266303888	0.9635164159156424	1.0200192032968514	1.0	13.023447869830083	-9.270337543529424	24.894735177532652	0.9938258516287666	1.1047022533695277	0.450035502320251	0.05718920194500595	677.0583097685388	1894220.0937288587	0.03466735623757121	0.017025718152020187	5.366145652297418e-10	9.270337543529424	0.11087640174076108	
LLEDS(ph)EES(ph)S(ph)EETVSR	ddPTM_K562_Methotrexat_30min_R1	2	LLEDSEESSEETVSR	15	0	A2AB15;A0A140T947;O60231	A2AB15	DHX16	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16	3	LLEDS(0.998)EES(0.995)S(0.982)EET(0.024)VS(0.002)R;LLEDS(1)EES(1)S(0.999)EET(0.001)VSR	135.14	0.00023319	11955000.0	4275.8	3829.7999999999997	5619.299999999999	3777.6000000000004	3810.1000000000004	3457.1000000000004	3523.9	3549.0	4027.5	4988.5	True	False	4087.840951698361	4462.609354530569	4439.885722278092	3446.4236731023675	4311.1949331627075	4125.135647434876	4314.22427818612	3424.1796584076515	3840.2624040764154	4085.0343104466647	1.0006870545112727	1.092428855032706	1.0868662010803594	0.843670679653491	1.0553632125286394	1.0098166463095941	1.0561047840291933	0.8382254341538801	0.9400808199470213	1.0	11.996132480365574	-9.246166201592262	24.98277086260845	0.9168648370874956	1.0201137661138069	0.24386543395196603	0.07581123081366097	1018.0407924521867	1665242.6031946733	0.03601836796364666	0.020696010329269068	5.673274514399624e-10	9.246166201592262	0.10324892902631133	
LLEDS(ph)EESS(ph)EETVSR	ddPTM_K562_Methotrexat_30min_R1	1	LLEDSEESSEETVSR	15	0	A2AB15;A0A140T947;O60231	A2AB15	DHX16	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16	2	LLEDS(0.996)EES(0.152)S(0.846)EET(0.005)VS(0.001)R	173.33	9.4038e-05	229650000.0	5914.7	5152.3	7163.4	6482.0	4817.0	4683.1	5045.3	5329.0	6125.6	6191.4	True	False	5654.696870061807	6003.63000087416	5659.900233653105	5913.733123954241	5450.519932034529	5588.04279613036	6176.836956421134	5141.576049494049	5840.822193025578	5070.077464107344	1.1153077857474893	1.1841298369454363	1.1163340745227859	1.1663989684219616	1.0750368156345649	1.1021612264684029	1.2182924225810918	1.0141020696217888	1.1520183339159165	1.0	12.30779207453957	-15.999999999975664	0.1759748933503773	0.48172709647467016	1.1549247582975746	0.3387272487949843	0.05432292249313827	145.9977093903759	1.3941817965959715	26.31317661391914	0.1710730711988223	1.000000000056036e-16	15.999999999975664	0.6731976618229044	
LLEDS(ph)EESSEETVSR	ddPTM_K562_Methotrexat_30min_R1	2	LLEDSEESSEETVSR	15	0	A2AB15;A0A140T947;O60231	A2AB15	DHX16	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16	1	LLEDS(1)EESSEETVSR;LLEDS(1)EESSEETVSR	219.41	3.5006999999999996e-27	31915000.0	2355.41	2416.6000000000004	4579.2	2896.8	3086.5	2769.3	2292.3	2893.7	2113.0	3141.0	True	False	2251.8689966883003	2815.9020748233797	3618.0884984706013	2642.842041572143	3492.4288499532036	3304.4280317148487	2806.4066270002118	2791.9269308352273	2014.7670912013587	2572.1344630876984	0.8754864992497562	1.0947724993517844	1.4066482722397395	1.0274898453013084	1.3577940422915313	1.2847026775373456	1.0910808386087574	1.0854513910146364	0.7833055075910563	1.0	11.32875034885172	-9.51137042372991	2.8166491541031573	0.8951325887866788	1.1763864035921197	0.30164892620325456	0.15875155273092728	0.3278918343333086	5.030410165120407	0.12378407060459114	0.04327269155047264	3.0805593212760907e-10	9.51137042372991	0.28125381480544087	
LLEENETEAVTVPTPS(ph)PTPVR	ddPTM_K562_Methotrexat_30min_R1	5	LLEENETEAVTVPTPSPTPVR	21	0	Q9UHR4	Q9UHR4	BAIAP2L1	Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1	1	LLEENETEAVTVPTPS(0.756)PT(0.243)PVR;LLEENETEAVTVPT(0.008)PS(0.992)PTPVR;LLEENETEAVTVPT(0.019)PS(0.773)PT(0.208)PVR;LLEENETEAVTVPT(0.001)PS(0.999)PTPVR;LLEENETEAVTVPTPS(0.98)PT(0.02)PVR	402.83	0.0	29683000.0	24159.1	21348.72	25879.4	25708.0	21133.59	21020.760000000002	19919.010000000002	23679.48	24075.5	25816.2	True	False	23097.094891289536	24876.233113805913	20447.667602926293	23454.219554244915	23913.027513067394	25082.724367872834	24386.355043966112	22846.659266742958	22956.235259923462	21140.636015907243	1.0925449392303126	1.1767022096727755	0.9672210234138875	1.1094377452313553	1.131140401597855	1.1864697140142506	1.153529866632992	1.0806987665627477	1.0858819594003735	1.0	14.367731160394573	-10.172180783886352	1.618755318654805	1.000725553982281	1.1148468779778888	0.25495415328743565	0.05823318105814219	0.9766009697394523	4.977925907470695	0.05808894912367724	0.016725700086902655	6.726965744009094e-11	10.172180783886352	0.11412132399560782	
LLEGEEER	ddPTM_K562_Methotrexat_30min_R1	2	LLEGEEER	8	0	P02545-3;P02545;P02545-5;P02545-4;P02545-6;A0A0C4DGC5;Q3BDU5;P02545-2;Q5TCI8;Q03252;P20700;E9PBF6	P02545-3;Q3BDU5;Q03252;P20700	LMNA;LMNB2;LMNB1	Prelamin-A/C;Lamin-A/C;Lamin-B2;Lamin-B1	0	;	148.04	9.1817e-08	31569000.0	4402.9	4061.5	4719.5	5115.700000000001	3832.8	3902.7	3855.6	4266.1	4464.1	4417.1	False	True	4209.353787883603	4732.59384130396	3728.941445783545	4667.214523636641	4336.8803810467	4656.841540957477	4720.316446827209	4116.0588449515	4256.56496537245	3617.120387425875	1.163730630176562	1.308387151767407	1.0309143866890336	1.2903121886297144	1.1989870163356775	1.2874444425864189	1.3049929063009218	1.1379380291737247	1.176782774543381	1.0	11.820625900198477	-11.89664388137262	6.592286939350949	0.9999999886335651	1.2134542558850459	0.3579237910544031	0.0847486345936237	1.3779063754250777e-08	2.1622715064927064e-09	0.07971589974744688	0.019333944706286552	1.2686917583697815e-12	11.89664388137262	0.21345426725148076	
LLEKDDSVIVEDSLSEPLGYCDGSGPEPHS(ph)PGGIR	ddPTM_K562_Methotrexat_30min_R1	1	LLEKDDSVIVEDSLSEPLGYCDGSGPEPHSPGGIR	35	1	F8VPL6;Q9H2S9-2;Q9H2S9	F8VPL6	IKZF4	Zinc finger protein Eos	1	LLEKDDSVIVEDSLS(0.007)EPLGY(0.035)CDGS(0.203)GPEPHS(0.754)PGGIR	91.11200000000001	4.0395e-10	10523000.0	3806.2	2661.3	5549.7	3306.4	3191.5	2654.3	2814.0	4162.5	3606.2	5481.9	True	False	3638.884005415197	3101.034590634553	4384.893811137816	3016.533045517171	3611.238190385758	3167.205909284197	3445.1111322159404	4016.10251567254	3438.548549119894	4489.07478930291	0.8106089063355223	0.6907959292690019	0.9767923273603396	0.6719721071935173	0.8044504402089795	0.7055364541556277	0.7674434697379853	0.894639252890724	0.7659815686995609	1.0	12.13220241683838	-10.989588222964741	0.6652889940148591	1.0095381759276476	0.7791690893343178	0.34157599510547754	0.08852562505625905	5.112679430030526	2.5542209985655315	0.21822998728469117	0.032437128483054974	1.0242636893444429e-11	10.989588222964741	-0.23036908659332977	
LLELTSS(ph)YSPDVSDYKEGR	ddPTM_K562_Methotrexat_30min_R1	1	LLELTSSYSPDVSDYKEGR	19	1	P38432	P38432	COIL	Coilin	1	LLELT(0.01)S(0.052)S(0.824)YS(0.114)PDVSDYKEGR	123.61	3.7008e-05	20247000.0	2457.2	1631.5	3011.0	2588.7	1821.4	1471.1	1487.6	1973.0	2210.4	2934.0	True	False	2349.184430168203	1901.077644241638	2379.0322477496015	2361.752690216033	2060.9460253700845	1755.3692548498593	1821.2321678338405	1903.6084716929543	2107.6389864607104	2402.624168958708	0.9777577619167688	0.7912505288188958	0.9901807692131345	0.982988817281236	0.8577896002200351	0.7306050099423717	0.7580179169774848	0.7923038885095266	0.8772237513011268	1.0	11.230395276873145	-7.9776562480415985	8.715358192564159	0.8118365335690382	0.928265351787953	0.22229688859245045	0.08809670582702879	0.29900076486057153	101.84948860994449	0.02707606515471437	0.030426323548002905	1.0527948503383113e-08	7.9776562480415985	0.11642881821891482	
LLELTSSYS(ph)PDVSDYKEGR	ddPTM_K562_Methotrexat_30min_R1	3	LLELTSSYSPDVSDYKEGR	19	1	P38432	P38432	COIL	Coilin	1	LLELT(0.004)S(0.005)S(0.063)Y(0.005)S(0.923)PDVS(0.001)DYKEGR;LLELT(0.001)S(0.019)S(0.016)YS(0.963)PDVSDYKEGR;LLELTS(0.003)S(0.014)Y(0.013)S(0.971)PDVSDYKEGR	121.14	5.724e-05	37193500.0	5706.5	4143.72	7427.5	6031.4	4267.299999999999	4270.5	3820.1	5416.0	5707.6	6888.4	True	False	5455.6490927701725	4828.399298802916	5868.56925279315	5502.636526352606	4828.524746931894	5095.713685566123	4676.854668151423	5225.516210181976	5442.254921789341	5640.844010039252	0.9671689348367939	0.855971072805702	1.040370774718926	0.9754987935421238	0.8559933120537213	0.903360149030369	0.8291054778022268	0.9263713374952225	0.9647944371628655	1.0	12.46169532636387	-5.877892384775064	19.352353516404214	0.9237716287190038	10.979798202041826	0.028197804172931384	0.06506963849793714	1820.2371753198663	286086.4781252881	0.0161026982357925	6746.6635032395125	1.324669738700025e-06	5.877892384775064	10.056026573322821	
LLETTDRPDGHQNNLR	ddPTM_K562_Methotrexat_30min_R1	2	LLETTDRPDGHQNNLR	16	1	J3KTM9;Q14974-2;Q14974	J3KTM9	KPNB1	Importin subunit beta-1	0	;	124.48	0.00077643	117152000.0	6144.8	4886.3	6523.6	6358.9	5442.9	5856.1	5321.5	6096.9	6153.5	6927.700000000001	False	True	5874.681949575774	5693.6780221010795	5154.385510268786	5801.425109829155	6158.7367527653605	6987.708444923025	6514.981837273314	5882.468571244183	5867.425128115264	5673.026399214468	1.0355463796870799	1.0036403184884652	0.9085777409712922	1.0226331946264988	1.085617502787956	1.2317426278662476	1.1484138057555011	1.0369189489509014	1.0342671997661976	1.0	12.46990286221352	-7.681110873967409	3.708761600836821	1.101948361857266	0.9826368237806409	0.32391247729205264	0.06879635173677359	0.26033192450092707	6.993463534139892	0.022653155241818327	0.029318635364085455	2.0839587872848295e-08	7.681110873967409	-0.1193115380766252	
LLFIS(ph)EPIPHPSNELR	ddPTM_K562_Methotrexat_30min_R1	4	LLFISEPIPHPSNELR	16	0	Q9UBU7	Q9UBU7	DBF4	Protein DBF4 homolog A	1	LLFIS(1)EPIPHPSNELR;LLFIS(1)EPIPHPSNELR;LLFIS(1)EPIPHPSNELR;LLFIS(1)EPIPHPSNELR	214.53	9.4859e-23	45514400.0	10338.97	7950.960000000001	7121.610000000001	9675.93	7629.47	7193.58	8309.93	8028.6900000000005	10095.36	9644.060000000001	True	False	9884.481258333131	9264.720996787913	5626.881383558969	8827.656239750468	8632.87903380932	8583.637525866934	10173.643337219326	7746.316421995192	9626.028917099165	7897.4272811478995	1.2516077586340766	1.1731315360008325	0.7124954979947717	1.1177888602815167	1.0931254858676611	1.086890353059293	1.2882224774015996	0.9808658118937762	1.2188816147858232	1.0	12.947167032479717														
LLFISEPIPHPS(ph)NELR	ddPTM_K562_Methotrexat_30min_R1	2	LLFISEPIPHPSNELR	16	0	Q9UBU7	Q9UBU7	DBF4	Protein DBF4 homolog A	1	LLFISEPIPHPS(1)NELR;LLFISEPIPHPS(1)NELR	120.79	0.00027691	9309700.0	3558.7	2904.6	3819.3	3843.0	3414.2	3019.6	3149.8	3920.2	3995.3	4058.3	True	False	3402.2638090670625	3384.535780241653	3017.681123822668	3506.090156642415	3863.2271438555717	3603.0949642747833	3856.2228302252174	3782.324344009487	3809.5593750481717	3323.3025442689614	1.0237598785383744	1.0184254172339164	0.9080368349329682	1.0550017971396168	1.1624662793695117	1.0841910768817375	1.1603586429033605	1.1381221822647802	1.1463173527844346	1.0	11.698401922635743	-7.52340255674584	6.620695958572753	1.1219697089575678	0.9856995952589847	0.5460878139934463	0.0537022659360941	0.09523330711669656	21.357537488602116	0.014949583137846632	0.02038835770241322	2.996383819796853e-08	7.52340255674584	-0.1362701136985831	
LLFLPR	ddPTM_K562_Methotrexat_30min_R1	1	LLFLPR	6	0	F2Z3I9;H7C2U7;F2Z2C1;F8WD52;B7WPJ3;Q8WTX7	F2Z3I9	GATSL3	GATS-like protein 3	0		96.337	0.00073754	0.0	1484.2	1213.1	1814.3	1355.1	1382.0	1207.1	1277.3	1427.4	1182.9	1582.3	False	True	1418.9563451308998	1413.5441558256398	1433.503223876488	1236.300486928477	1563.757223598032	1440.3549911829675	1563.7670395093876	1377.1975329419777	1127.9072371898187	1295.7301371995113	1.0951017533617917	1.0909248116129817	1.106328534562566	0.9541342378595278	1.2068540961606504	1.1116164931503691	1.2068616717437708	1.0628737369021481	0.8704800519864331	1.0	10.339549562865963	-9.60560206925445	5.964922176098008	0.9389611038609608	1.1089925654044825	0.47655104122964664	0.07226325961835087	0.17853183486513907	9.960683263221327	0.05040720685090071	0.01839172567694828	2.479693083939456e-10	9.60560206925445	0.17003146154352178	
LLGPAPEDDGGHNDHSQPQASQDQDS(ph)HTLSPQV	ddPTM_K562_Methotrexat_30min_R1	1	LLGPAPEDDGGHNDHSQPQASQDQDSHTLSPQV	33	0	Q92610	Q92610	ZNF592	Zinc finger protein 592	1	LLGPAPEDDGGHNDHSQPQAS(0.014)QDQDS(0.349)HT(0.349)LS(0.286)PQV	49.36600000000001	0.003882	32167000.0	1438.5	1280.6	1698.2	1281.0	1388.9	1281.6	1288.9	1254.4	1510.7	1631.5	True	False	1375.2652624112657	1492.1973835218155	1341.7710272761121	1168.696718880805	1571.5646945407427	1529.251061801086	1577.9686347949973	1210.2820409993114	1440.4678867382363	1336.0195404417639	1.0293751107536384	1.116897873386201	1.0043049421511054	0.8747601988623367	1.1763036744365987	1.144632256872103	1.181096972783221	0.905886481719514	1.078178756473828	1.0	10.38372539329162	-6.001253706586309	19.327057485725227	1.055277675122293	1.0048833351287825	0.004815399252295016	0.10165710334129695	9709.766857425651	559.8547881800844	0.0254205251032569	10584.148182295887	9.97117396606079e-07	6.001253706586309	-0.050394339993510506	
LLGPAPEDDGGHNDHSQPQASQDQDSHTLS(ph)PQV	ddPTM_K562_Methotrexat_30min_R1	2	LLGPAPEDDGGHNDHSQPQASQDQDSHTLSPQV	33	0	Q92610	Q92610	ZNF592	Zinc finger protein 592	1	LLGPAPEDDGGHNDHSQPQAS(0.004)QDQDS(0.279)HT(0.07)LS(0.648)PQV;LLGPAPEDDGGHNDHSQPQAS(0.007)QDQDS(0.122)HT(0.122)LS(0.75)PQV	90.898	2.5079e-07	57568000.0	2696.4	2228.5	2889.7	2824.0	2753.9	2578.54	2317.21	3010.1	2928.6000000000004	2922.0	True	False	2577.8694845781965	2596.7217469767015	2283.1914600870236	2576.424304542853	3116.0861201639814	3076.8063614985736	2836.9033286006024	2904.2330768590773	2792.450025221154	2392.7974852410857	1.0773454504523035	1.0852242043020492	0.9541933549202896	1.0767414795587125	1.3022774135229505	1.2858615827191788	1.1856010991731591	1.2137396059518435	1.1670231360761405	1.0	11.224482584003253	-7.60224134058838	7.157562993929215	1.2069153350039563	1.0390007699363277	0.410776842993387	0.08431063080680007	0.19443752852683002	14.650444315527546	0.024393142290587536	0.0315618962434387	2.498956287668585e-08	7.60224134058838	-0.16791456506762859	
LLGRNS(ph)NSK	ddPTM_K562_Methotrexat_30min_R1	1	LLGRNSNSK	9	1	O75534;O75534-4;E9PLT0;O75534-2;O75534-3	O75534	CSDE1	Cold shock domain-containing protein E1	1	LLGRNS(0.505)NS(0.495)K	108.98	0.011592	71406000.0	3342.8	2657.0	5215.8	4096.1	2846.4	2583.5	2556.9	3532.2	3323.3	4245.3	True	False	3195.8545145557027	3096.0240887220534	4121.074858124334	3737.001272605517	3220.7514914974236	3082.724811300803	3130.349912566785	3407.9705239299806	3168.8005083717326	3476.435032201913	0.9192907346039211	0.8905744131686206	1.1854312880727467	1.0749521386103873	0.9264523748218749	0.8867488627705662	0.9004482705905987	0.980306115995912	0.9115086227757491	1.0	11.763392913284303	-7.7839599053209465	24.782982590632383	0.9291947614070296	1.0204822402928593	0.19532584665100206	0.08238022563072085	355.70594353141155	391438.59348145704	0.02755779708684788	0.03127084761690823	1.6445235409393766e-08	7.7839599053209465	0.09128747888582966	
LLGS(ph)LDEVVLLSPVPELR	ddPTM_K562_Methotrexat_30min_R1	2	LLGSLDEVVLLSPVPELR	18	0	Q9H1A4;H0Y564	Q9H1A4	ANAPC1	Anaphase-promoting complex subunit 1	1	LLGS(0.999)LDEVVLLS(0.001)PVPELR;LLGS(1)LDEVVLLSPVPELR	254.72	6.415499999999999e-85	149864000.0	2085.71	1713.76	2379.29	2232.6	2134.7	2030.89	1726.73	2212.44	2146.03	2442.13	True	False	1994.024685758638	1996.9297110607101	1879.9095439216721	2036.871424335117	2415.4504668702734	2423.330749766861	2113.993157544856	2134.6272311770695	2046.2615337107682	1999.83659227646	0.9970938092940853	0.9985464406307113	0.940031576170795	1.0185189290973515	1.2078239173135195	1.2117643807128902	1.057082946531371	1.0674008263581047	1.0232143674206209	1.0	10.965666406090257	-7.536724846636963	24.887995198365857	1.1029295823033292	0.9803426894391675	0.37922375687698373	0.06737805146819435	227.43899388126547	408813.0688289538	0.021263610680891724	0.02746483137809876	2.9058631217318483e-08	7.536724846636963	-0.12258689286416169	
LLHIEELR	ddPTM_K562_Methotrexat_30min_R1	2	LLHIEELR	8	0	Q9Y224	Q9Y224	C14orf166	UPF0568 protein C14orf166	0	;	190.52	2.788e-11	14509300.0	11421.2	9821.4	11442.900000000001	10406.3	9830.900000000001	8679.8	9160.6	11926.3	11378.5	11543.4	False	True	10919.137723358746	11444.219414743993	9041.191666480885	9493.99583582304	11123.8356653183	10357.04850672681	11215.09773908221	11506.845269108811	10849.516018568227	9452.778402166996	1.155124690202787	1.210672558675497	0.9564586497032707	1.0043603512007215	1.1767794813393937	1.0956618325414795	1.1864340051080868	1.2172976853525872	1.1477594794860564	1.0	13.206522719592499	-7.794503145317408	24.999828470632565	1.1485595530447523	1.0819269560825184	0.08126188304113413	0.08690038015282309	442.5755966456957	334633.2496758099	0.028202676429305452	0.03198113222551342	1.6050806334814532e-08	7.794503145317408	-0.06663259696223389	
LLHMDS(ph)DDEIPIR	ddPTM_K562_Methotrexat_30min_R1	5	LLHMDSDDEIPIR	13	0	Q1MSJ5-2;Q1MSJ5-1;Q1MSJ5	Q1MSJ5-2	CSPP1	Centrosome and spindle pole-associated protein 1	1	LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR	204.23	1.0682999999999999e-11	147404000.0	14941.500000000002	14085.4	16536.7	15507.0	14206.2	12592.699999999999	12791.4	15241.499999999998	15041.0	16751.9	True	False	14284.689550446938	16412.77293913647	13065.872657376569	14147.525386170679	16074.564305266542	15026.06105332595	15660.197063477948	14705.44780603556	14341.747192976634	13717.968580770073	1.0413123099342345	1.1964433977596354	0.9524641043202551	1.03131344140872	1.171788972297251	1.0953561356299917	1.1415828058850128	1.071984362659187	1.045471646077465	1.0	13.743779236028445	-9.945662038641391	2.30910074243566	1.0013261164236167	1.0904472146905477	0.14740156742218058	0.06755592436324856	0.5486925757128668	6.518934084019494	0.06515993434436233	0.018002943551397213	1.1332819229339596e-10	9.945662038641391	0.08912109826693104	
LLHPS(ph)PDLVSQEATLSEAR	ddPTM_K562_Methotrexat_30min_R1	1	LLHPSPDLVSQEATLSEAR	19	0	A0A087WU05;A0A087WY48;Q8IY22-3;Q8IY22-2;Q8IY22	A0A087WU05	CMIP	C-Maf-inducing protein	1	LLHPS(1)PDLVSQEATLSEAR	166.62	2.0014e-12	37939000.0	4492.3	4157.5	4993.6	4980.0	3969.1	3899.6	3916.3	4988.6	5046.7	5098.5	True	False	4294.823870928138	4844.456209582962	3945.5116015816716	4543.411131948797	4491.106220103436	4653.1425098310865	4794.629966985531	4813.148110434602	4812.080018535683	4175.112244524876	1.028672672587485	1.1603175976731752	0.9450073124993715	1.088212930779741	1.0756851449905198	1.1144951889456591	1.1483834891560276	1.1528188533724881	1.152563029855331	1.0	12.027599268462584	-8.117956543833065	2.0437674422207315	1.1265562556684996	1.0553044615344396	0.14120936682085938	0.06539119159737615	0.55052149940611	4.543569469109137	0.023991112064046454	0.024291356194230635	7.62155268626391e-09	8.117956543833065	-0.07125179413406002	
LLIDPNCSGHS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	LLIDPNCSGHSPR	13	0	Q8WYQ5-3;Q8WYQ5;Q8WYQ5-2;C9JSD5	Q8WYQ5-3	DGCR8	Microprocessor complex subunit DGCR8	1	LLIDPNCS(0.006)GHS(0.994)PR;LLIDPNCSGHS(1)PR	171.71	0.00015111	161682000.0	6124.01	6303.3	8299.7	6508.799999999999	6513.929999999999	6616.7	6345.0	7547.0	6781.599999999999	7839.5	True	False	5854.805853082526	7344.8131872193135	6557.706392111382	5938.183609563925	7370.6259707032705	7895.283630320885	7768.027766137213	7281.567732319682	6466.3248962097205	6419.6905836918195	0.9120074833444011	1.1441070393451076	1.0214988256241149	0.9249952987841681	1.148127915919678	1.2298542316630603	1.2100314905940521	1.1342552475686791	1.0072642617132308	1.0	12.648288048655951	-7.786555718048662	24.822166266510774	1.1381370728482616	1.0123879726659029	0.2789739159504263	0.09222360586777095	267.57673375963986	264441.0330982871	0.029104376424905147	0.03301447768115953	1.6347234099395537e-08	7.786555718048662	-0.12574910018235874	
LLIVQDAS(ph)ER	ddPTM_K562_Methotrexat_30min_R1	1	LLIVQDASER	10	0	C9JPX5;C9JKL2;O95772-2;O95772	C9JPX5	STARD3NL	MLN64 N-terminal domain homolog	1	LLIVQDAS(1)ER	110.31	0.0029327	7563000.0	764.98	819.83	614.62	1269.9	963.45	812.23	768.75	1120.2	1476.0	2435.1	True	False	731.352395161189	955.2929727726764	485.6196612792628	1158.569838646944	1090.1605622833029	969.1819521899937	941.1617565355378	1080.8019310645961	1407.3810821643183	1994.0797933985514	0.3667618505449724	0.47906456699235234	0.24353070668832724	0.5810047534117827	0.5466985653695029	0.4860296741376617	0.47197798184971146	0.5420053573796879	0.7057797219667372	1.0	10.961507425209195	-15.999999999999869	0.13086304914136543	2.8162725519842735	0.26708461168615616	0.798753555121124	0.08628149373269582	62.67500174326706	0.5154372096291863	29.448414070579904	0.6551017576791675	1.0000000000003027e-16	15.999999999999869	-2.5491879402981175	
LLKEGEEPTVYS(ph)DEEEPKDESAR	ddPTM_K562_Methotrexat_30min_R1	4	LLKEGEEPTVYSDEEEPKDESAR	23	2	O00264-2;O00264	O00264-2	PGRMC1	Membrane-associated progesterone receptor component 1	1	LLKEGEEPT(0.001)VY(0.012)S(0.987)DEEEPKDESAR;LLKEGEEPTVYS(1)DEEEPKDESAR;LLKEGEEPT(0.013)VY(0.219)S(0.768)DEEEPKDESAR;LLKEGEEPT(0.001)VY(0.144)S(0.855)DEEEPKDESAR	119.88	1.7896e-06	698220000.0	7960.099999999999	4644.780000000001	12517.5	8106.700000000001	4869.03	4414.5	3745.0699999999997	6456.960000000001	6026.23	11466.4	True	False	7610.18353515462	5412.2509472391475	9890.247811758763	7395.998197463716	5509.3927890126815	5267.539647566244	4584.997280713552	6229.865056960232	5746.07188263623	9389.723848312247	0.8104800160360957	0.5764015038857582	1.0533055041375345	0.7876694050797998	0.5867470522046253	0.560989836619429	0.4882994808774574	0.6634769198329531	0.6119532347768732	1.0	13.196867013517824	-5.119138929697366	17.56623752011336	0.6981906249713565	0.8112695736686519	0.0	0.18346208684821472	0.0	0.0	0.04290734004391618	0.0	7.6008308940253345e-06	5.119138929697366	0.1130789486972954	
LLKPGEEPSEYT(ph)DEEDTKDHNKQD	ddPTM_K562_Methotrexat_30min_R1	1	LLKPGEEPSEYTDEEDTKDHNKQD	24	3	U3KPU8;U3KQM0;O15173;O15173-2	U3KPU8	PGRMC2	Membrane-associated progesterone receptor component 2	1	LLKPGEEPS(0.04)EY(0.394)T(0.45)DEEDT(0.116)KDHNKQD	47.155	0.028161000000000002	39163000.0	2946.9	1642.1	6578.2	3769.0	1899.8	1310.8	1380.1	2608.1	2566.0	4575.9	True	False	2817.357804518427	1913.4291140724442	5197.525716421929	3438.5776217500033	2149.6569995597265	1564.0935485399998	1689.6225563508224	2516.3716447148486	2446.7072200769912	3747.1601686224135	0.7518647929998108	0.5106344612901581	1.3870572600404003	0.9176489573473835	0.5736763049416207	0.4174077109479457	0.450907482017772	0.6715409887696245	0.6529497299221362	1.0	11.87158193020706	-7.761372739685015	24.999912913672663	0.5919651135081397	0.8999506219835586	0.1998088320774739	0.25265164800269124	2.6427710836178324	990978.0104560397	0.07850714191169038	0.09495381996311972	1.7323165731328897e-08	7.761372739685015	0.30798550847541883	
LLLAEDS(ph)EEEVDFLSER	ddPTM_K562_Methotrexat_30min_R1	9	LLLAEDSEEEVDFLSER	17	0	Q14676;Q14676-3;Q14676-2;Q14676-4	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	1	LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER	246.95	8.767799999999998e-66	529316070.0	12012.168999999998	10768.776	13580.06	11568.64	9956.810000000001	10508.159999999998	10440.38	12232.586	12721.748000000001	13001.650000000001	True	False	11484.128433725045	12548.133196105347	10729.790988500326	10554.435292672315	11266.30503725986	12538.713200355567	12781.900981721623	11802.35901688425	12130.316712236958	10646.92519643559	1.0786333351501085	1.1785687383533276	1.0077830726276238	0.9913129939342263	1.0581745273303533	1.1776839762669993	1.2005251042808853	1.1085227705775071	1.1393258136441102	1.0	13.378149223677045	-8.24131800221217	23.452624201044063	1.136701303226475	1.062282362379453	0.16125400558465908	0.06859649968367358	610.3189918095146	711361.6734647485	0.02335488665298363	0.023317015781257534	5.736962324151617e-09	8.24131800221217	-0.07441894084702194	
LLLAEDS(ph)EEEVDFLSERR	ddPTM_K562_Methotrexat_30min_R1	10	LLLAEDSEEEVDFLSERR	18	1	Q14676;Q14676-3;Q14676-2;Q14676-4	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	1	LLLAEDS(0.846)EEEVDFLS(0.154)ERR;LLLAEDS(1)EEEVDFLSERR;LLLAEDS(1)EEEVDFLSERR;LLLAEDS(1)EEEVDFLSERR;LLLAEDS(1)EEEVDFLSERR;LLLAEDS(1)EEEVDFLSERR;LLLAEDS(1)EEEVDFLSERR;LLLAEDS(1)EEEVDFLSERR;LLLAEDS(1)EEEVDFLSERR;LLLAEDS(1)EEEVDFLSERR	166.3	3.1287e-12	305837900.0	11555.380000000001	10799.489999999998	13143.79	12889.7	9934.31	10182.55	10505.52	11312.07	11534.960000000001	13354.400000000001	True	False	11047.419331221336	12583.922162556612	10385.088099518018	11759.680013550285	11240.845892881447	12150.183676141269	12861.650284903051	10914.218086357687	10998.702227318516	10935.788753218196	1.0102078213581338	1.1507100627609874	0.949642347147743	1.0753389882453275	1.0278953028946796	1.1110477671366594	1.1761063216512948	0.9980275161355726	1.005752989155154	1.0	13.416769659315271														
LLLDPS(ph)SPPTK	ddPTM_K562_Methotrexat_30min_R1	1	LLLDPSSPPTK	11	0	F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479	F5GX19	LAMTOR1	Ragulator complex protein LAMTOR1	1	LLLDPS(0.672)S(0.327)PPTK	160.15	3.4513999999999997e-06	8374600.0	8153.1	5546.5	11096.0	8206.0	5644.2	6131.9	5835.4	6938.8	7490.0	10373.0	True	False	7794.699486246292	6462.964850619826	8767.101235811888	7486.592720636915	6386.5112311374905	7316.8028915871455	7144.136993934928	6694.758471050721	7141.79153483113	8494.34918357488	0.9176335135031337	0.7608546235792797	1.0321098234064143	0.8813615450508422	0.7518540965430035	0.861372982610051	0.8410458340645105	0.7881426023780678	0.8407697141342946	1.0	13.05228770051215	-5.926059531889667	20.245461241811196	0.8560855363970945	2.85057486277036	0.03108074136315253	0.08796185840666867	1475.4331072386321	440737.3983933654	0.02079911953574734	12094.500459556353	1.1856062173977507e-06	5.926059531889667	1.9944893263732655	
LLLDPSS(ph)PPTK	ddPTM_K562_Methotrexat_30min_R1	1	LLLDPSSPPTK	11	0	F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479	F5GX19	LAMTOR1	Ragulator complex protein LAMTOR1	1	LLLDPS(0.264)S(0.727)PPT(0.009)K	134.49	0.00031562	7508600.0	3421.2	2779.6	5122.4	3592.5	2664.6	2543.8	2718.6	3507.3	3554.7	4394.7	True	False	3270.808144429212	3238.8816548783666	4047.278241737818	3277.551102716077	3015.0416049199116	3035.353348166047	3328.315253746355	3383.946271043435	3389.442772879067	3598.7772444863094	0.9088665183265846	0.8999950357696245	1.1246259400852492	0.910740198698771	0.8377961179840347	0.8434401859177351	0.9248461429074752	0.9403044537496681	0.941831778577581	1.0	11.813291090392168														
LLLFPSPPGEAPTTPSSSDEHS(ph)PHNGSLFTMEPPHVPR	ddPTM_K562_Methotrexat_30min_R1	1	LLLFPSPPGEAPTTPSSSDEHSPHNGSLFTMEPPHVPR	38	0	Q5SNT2;H0Y994;H0Y4R5	Q5SNT2	TMEM201	Transmembrane protein 201	1	LLLFPS(0.022)PPGEAPT(0.099)T(0.092)PS(0.099)S(0.099)S(0.099)DEHS(0.489)PHNGS(0.002)LFT(0.001)MEPPHVPR	55.033	0.00054253	5660000.0	1418.7	793.77	852.91	892.65	826.31	899.18	941.38	1319.4	1387.0	1753.6	True	False	1356.3356467034153	924.9270007169386	673.8958467047871	814.392760428533	934.9842485031039	1072.93380910604	1152.5084284454301	1272.9959541569606	1322.5186727384212	1436.006047268572	0.9445194533012602	0.644096870257784	0.46928482507897845	0.5671234894710855	0.6511004952113802	0.7471652442877019	0.8025790912493838	0.8864837001058087	0.9209701277052312	1.0	10.487846109272919	-9.008484223256751	1.106536270587554	0.9645194472451606	0.6398458452193666	0.5328657344401608	0.11486256398074143	0.4295951325266098	0.9801835904600519	0.096937392699246	0.04475841142116991	9.806539381786574e-10	9.008484223256751	-0.324673602025794	
LLLLGS(ph)S(ph)T(ph)RMAT(ph)PRR	ddPTM_K562_Methotrexat_30min_R1	1	LLLLGSSTRMATPRR	15	2	F8WE78	F8WE78	GNAI2		4	LLLLGS(1)S(1)T(1)RMAT(1)PRR	67.113	0.026070999999999997	45174000.0	3004.1	2172.3	3178.4	3172.3	2345.1	2342.7	2171.9	2733.9	2458.4	2844.8	True	False	2872.043361007773	2531.2356522133687	2511.2972754059574	2894.1893843134894	2653.5217547465586	2795.3936192894876	2659.003862139231	2637.7471874107277	2344.1095205913016	2329.5791533243814	1.2328593157735286	1.086563488774879	1.078004699613773	1.2423657638691485	1.1390562758770832	1.1999564879778284	1.1414095367159989	1.1322848522431963	1.0062373357205678	1.0	11.185853635142163	-9.72879971012775	3.3988591897727005	0.9957018559842568	1.1569800789827878	0.5888294114985532	0.05167922701119095	0.1659990043199522	3.692278067631348	0.04566265600865769	0.013462404986271367	1.8672406346826015e-10	9.72879971012775	0.161278222998531	
LLLPGELAK	ddPTM_K562_Methotrexat_30min_R1	2	LLLPGELAK	9	0	Q5QNW6;O60814;P57053;P58876;P62807;Q16778;U3KQK0;P23527;Q93079;Q99877;Q99879;P06899;P33778;Q5QNW6-2;Q8N257;Q99880;Q96A08;A0A2R8Y619	Q5QNW6	HIST2H2BF;HIST1H2BK;H2BFS;HIST1H2BD;HIST1H2BC;HIST2H2BE;HIST1H2BN;HIST1H2BO;HIST1H2BH;HIST1H2BM;HIST1H2BJ;HIST1H2BB;HIST3H2BB;HIST1H2BL;HIST1H2BA	Histone H2B type 2-F;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-D;Histone H2B type 1-C/E/F/G/I;Histone H2B type 2-E;Histone H2B;Histone H2B type 1-O;Histone H2B type 1-H;Histone H2B type 1-N;Histone H2B type 1-M;Histone H2B type 1-J;Histone H2B type 1-B;Histone H2B type 3-B;Histone H2B type 1-L;Histone H2B type 1-A	0	;	128.69	0.014741999999999998	23468000.0	17232.6	12329.1	21993.6	17917.5	12486.8	11412.8	11244.099999999999	14765.900000000001	15077.6	19080.1	False	True	16475.075537732628	14366.27421613213	17377.443920327358	16346.70059371337	14129.033067745222	13618.162077187457	13765.87565094145	14246.574927608215	14376.645666965265	15624.509000050806	1.0544379690701997	0.9194704432686758	1.1121913603986437	1.0462217144654091	0.9042865326327553	0.8715897617738372	0.8810437275754833	0.911809448064057	0.920134236981048	1.0	13.931523233367578	-7.765191998596521	24.98455807467704	0.906551685840459	1.0306161711023274	0.5195619261801121	0.05535498145256835	73.63419439165051	490249.2609614213	0.016791083920172676	0.019778920804802785	1.7171490795571953e-08	7.765191998596521	0.12406448526186842	
LLNLQDS(ph)DSEECTSR	ddPTM_K562_Methotrexat_30min_R1	5	LLNLQDSDSEECTSR	15	0	Q52LR7	Q52LR7	EPC2	Enhancer of polycomb homolog 2	1	LLNLQDS(0.98)DS(0.019)EECT(0.001)SR;LLNLQDS(0.993)DS(0.007)EECTSR;LLNLQDS(0.612)DS(0.054)EECT(0.006)S(0.328)R;LLNLQDS(0.918)DS(0.082)EECTSR;LLNLQDS(0.585)DS(0.415)EECTSR	225.17	1.3346000000000001e-36	110704000.0	6092.34	5803.0	6918.68	5912.62	5089.3	5244.7	5096.87	5897.320000000001	6326.139999999999	6894.98	True	False	5824.528028361938	6761.847115865289	5466.543617356435	5394.269784534756	5758.632154889626	6258.164047930833	6239.972841669315	5689.907912967204	6032.039132197138	5646.232308277753	1.0315778222271852	1.1975857078979855	0.96817546974504	0.9553751050282498	1.019907053141807	1.1083787747726828	1.1051569437766666	1.0077353538262	1.0683299593170772	1.0	12.46307277283784	-9.923004651332846	0.004737226879455305	6.193291890508983e-07	2.0786301926470396	0.027391977697142078	0.06945989802673525	34133.26461271204	115.93635210021777	25568.99589298033	25293.846415724074	1.1939753168130834e-10	9.923004651332846	2.0786295733178504	
LLPEGEETLES(ph)DDEKDEHTSK	ddPTM_K562_Methotrexat_30min_R1	2	LLPEGEETLESDDEKDEHTSK	21	1	Q8N6N3	Q8N6N3	C1orf52	UPF0690 protein C1orf52	1	LLPEGEET(0.005)LES(0.97)DDEKDEHT(0.019)S(0.006)K;LLPEGEET(0.001)LES(0.902)DDEKDEHT(0.078)S(0.019)K	82.146	0.0019417999999999998	159075000.0	9707.5	5873.200000000001	17094.699999999997	10730.9	5802.5	5181.5	5132.3	8300.1	7563.6	13360.0	True	False	9280.769923432303	6843.646472669314	13506.75608289775	9790.138657797062	6565.630455808672	6182.751542386335	6283.348921063207	8008.1807784585335	7211.969886895693	10940.374538953092	0.8483045886946755	0.6255404189593857	1.2345789474397866	0.8948632081049304	0.6001284903393217	0.5651316159581842	0.5743266739809874	0.731984151908647	0.6592068545018772	1.0	13.41737450856117	-7.7500081745255605	23.737946431493445	0.6631888076053689	0.9049987944841553	0.24036381430640752	0.18158077250871438	156.59475241072485	325180.14474879106	0.053719943205011944	0.06865490449852225	1.7782459386173647e-08	7.7500081745255605	0.2418099868787864	
LLPPAS(ph)P	ddPTM_K562_Methotrexat_30min_R1	5	LLPPASP	7	0	Q9Y4R8	Q9Y4R8	TELO2	Telomere length regulation protein TEL2 homolog	1	LLPPAS(1)P;LLPPAS(1)P;LLPPAS(1)P;LLPPAS(1)P;LLPPAS(1)P	130.04	9.0501e-05	129654600.0	15069.19	14415.59	17179.9	14643.080000000002	14474.6	13198.43	13375.24	15268.0	14941.64	14806.480000000001	True	False	14406.766450938629	16797.521224366115	13574.073767224643	13359.343911248352	16378.263609762713	15748.839803064386	16374.978045508135	14731.015786015225	14247.006417689467	12124.882994275307	1.188198389851737	1.3853759440232922	1.1195220418731928	1.1018121921305046	1.350797662748219	1.298885920012598	1.3505266857617912	1.2149408611176198	1.1750221774854328	1.0	13.5656832048374	-10.126136260664415	1.9607277896105322	1.0009174163131536	1.255521255296739	0.4094872448057014	0.09196348382056066	0.5384718373866414	4.252005664164682	0.0919890049528102	0.025692850891288557	7.479347978237522e-11	10.126136260664415	0.2546038389835854	
LLPPVGTGRS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	LLPPVGTGRSPR	12	1	Q9NWZ5;Q9NWZ5-3;Q9NWZ5-2;Q9NWZ5-4	Q9NWZ5	UCKL1	Uridine-cytidine kinase-like 1	1	LLPPVGT(0.04)GRS(0.96)PR	85.976	0.01753	98048000.0	3098.7	2883.0	4014.8	3555.9	3116.8	2723.0	3221.3	3106.4	3193.6	3062.8	True	False	2962.4848582786144	3359.366747378877	3172.148345488245	3244.1597678909097	3526.7138310494543	3249.1812119884207	3943.758525304621	2997.146151275719	3045.130233062309	2508.097240861192	1.1811682617462638	1.3394084936776172	1.264762902254556	1.2934744773998395	1.4061312191542084	1.2954765704669275	1.5724105353867674	1.1949880181864898	1.2141196854140786	1.0	11.292377568283946	-11.527120136135839	9.041604977653245	1.0000038956868966	1.3133080208113723	0.41127333022222334	0.10990828782947418	0.0	0.0	0.10656232032283379	0.025845158964820425	2.9708441122443695e-12	11.527120136135839	0.3133041251244757	
LLPQLTYLDGYDR	ddPTM_K562_Methotrexat_30min_R1	1	LLPQLTYLDGYDR	13	0	H0YN26;Q92688-2;P39687;Q92688	H0YN26	ANP32A;ANP32B	Acidic leucine-rich nuclear phosphoprotein 32 family member B;Acidic leucine-rich nuclear phosphoprotein 32 family member A	0		120.77	0.011086	4713800.0	528.77	417.16	473.74	695.77	510.62	551.8	511.17	557.48	690.55	549.48	False	True	505.5259039313209	486.0885994923945	374.3084480401517	634.7729243526137	577.7754801111628	658.4275404976897	625.8128846676694	537.8731124173281	658.4464812253186	449.9638474299358	1.1234811570279248	1.0802836767193473	0.8318633823096988	1.4107198344450431	1.284048670601539	1.4632898715273208	1.3908070353699142	1.1953696180026567	1.4633319654149455	1.0	8.813665281819734	-7.2739063580379275	24.996217159175853	1.3315090143938433	1.0187168258795365	0.45984265654578826	0.14996634221727245	601.2172755371421	1205435.188732274	0.04008174295644991	0.05991507524097291	5.322230040673392e-08	7.2739063580379275	-0.3127921885143068	
LLPS(ph)PVTCTPK	ddPTM_K562_Methotrexat_30min_R1	1	LLPSPVTCTPK	11	0	H0YCH4;Q9BU19-2;Q9BU19;Q9BU19-5	H0YCH4	ZNF692	Zinc finger protein 692	1	LLPS(0.983)PVT(0.017)CTPK	130.15	0.0009287000000000001	19536000.0	4423.3	3197.3	5738.2	4824.9	3449.4	3144.0	3107.4	4192.5	4606.6	5279.3	True	False	4228.857028309873	3725.5994801923302	4533.830237142731	4401.908508140514	3903.056560838674	3751.533503669332	3804.3135509054014	4045.047398668378	4392.44017147571	4323.167612537055	0.9781848420695779	0.8617753957510703	1.048728766378329	1.0182137040847345	0.9028233255448918	0.8677742433094656	0.8799828949201524	0.9356674922660558	1.016023565391674	1.0	12.077873056377811	-9.757246567863147	23.997637460483393	1.0080118120875128	0.9352916651532229	0.18520279612222035	0.059823810095411954	107.46856135102985	615147.3598212643	0.04743438364236074	0.016460238057018968	1.7488535065285384e-10	9.757246567863147	-0.07272014693428985	
LLPSPVT(ph)CTPK	ddPTM_K562_Methotrexat_30min_R1	1	LLPSPVTCTPK	11	0	H0YCH4;Q9BU19-2;Q9BU19;Q9BU19-5	H0YCH4	ZNF692	Zinc finger protein 692	1	LLPS(0.015)PVT(0.95)CT(0.035)PK	100.02	0.017827000000000003	23569000.0	4609.9	3525.2	6823.4	5328.0	3510.8	3455.5	3335.1	3978.5	4614.9	6094.7	True	False	4407.254315738401	4107.679381845309	5391.26158727819	4860.9025122536505	3972.531737053524	4123.226470079319	4083.0810721582698	3838.5738999647356	4400.3543062873405	4990.890771149505	0.883059661657015	0.8230353197850543	1.0802203122623082	0.9739548980620316	0.7959564573156483	0.826150412650617	0.8181066786235941	0.7691159907073328	0.881677141027442	1.0	12.285081614539294	-7.759454336831089	24.991115721344627	0.8343196531600162	0.9417190217673588	0.20460143958387778	0.08572868583238018	74.24250220256611	934680.3237439469	0.026081658257534	0.0319862011535014	1.7399856363082407e-08	7.759454336831089	0.10739936860734256	
LLPYPTLASPAS(ph)D	ddPTM_K562_Methotrexat_30min_R1	4	LLPYPTLASPASD	13	0	P0C1Z6-2;P0C1Z6	P0C1Z6-2	TFPT	TCF3 fusion partner	1	LLPYPTLASPAS(1)D;LLPYPTLASPAS(1)D;LLPYPTLASPAS(1)D;LLPYPTLASPAS(1)D	152.64	2.0992999999999998e-08	35082500.0	8428.2	7730.1	9394.3	8683.1	8421.5	7549.4	7896.9	10103.8	9662.7	10453.2	True	False	8057.706419641727	9007.367635766033	7422.564810705445	7921.866104382448	9529.074861455012	9008.214705025846	9667.98084576974	9748.443627111648	9213.483186063118	8560.024186420991	0.9413181837060571	1.0522596010948984	0.8671196072646699	0.9254490328367446	1.1132065346931208	1.0523585575045258	1.1294338234588557	1.1388336545328785	1.0763384524869366	1.0	13.063399157641351	-7.761997906852158	24.999946334832778	1.0925569668070958	0.9484155913730028	0.5854488894664411	0.05687182826057199	10.389526965573872	465050.6557427878	0.017316583682146496	0.020844301178115653	1.7298246963463707e-08	7.761997906852158	-0.144141375434093	
LLQDFFNGR	ddPTM_K562_Methotrexat_30min_R1	2	LLQDFFNGR	9	0	A0A0G2JIW1;P0DMV8-2;P0DMV9;P0DMV8;V9GZ37	A0A0G2JIW1	HSPA1A;HSPA1B	Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B	0	;	168.26	2.1750999999999997e-06	52331000.0	5421.0	4349.0	5859.799999999999	5140.299999999999	4286.0	4359.1	4737.5	5285.5	5273.0	5888.0	False	True	5182.69933092212	5067.598329639525	4629.908058905055	4689.657879830601	4849.684124704173	5201.434381630088	5800.00497117022	5099.605969150082	5027.8593809298445	4821.626144113453	1.074886184871361	1.0510143628257804	0.9602378783675588	0.9726299260169793	1.005819194552231	1.07877181394089	1.2029147009357486	1.0576527123273556	1.042772548234204	1.0	12.235304077256767	-8.28950458596871	6.242254309808678	1.0883365763820092	1.0097915756813713	0.2167969881829327	0.05813572807377733	0.25957414021101005	35.71581405215908	0.021392164339875105	0.01926390258553983	5.1344675569061e-09	8.28950458596871	-0.07854500070063786	
LLQISPSSGTTVTS(ph)VVGFSCDGMRPEAIR	ddPTM_K562_Methotrexat_30min_R1	1	LLQISPSSGTTVTSVVGFSCDGMRPEAIR	29	1	C9J840;A0A0D9SG62;G5E948;A0A0D9SEY1;O95819-2;O95819-3;E7EX83;H7C0P6;E7ENQ1;G3XAA2;H7C360;O95819-4;O95819;O95819-5;O95819-6;E7EN19	C9J840	MAP4K4	Mitogen-activated protein kinase kinase kinase kinase 4	1	LLQIS(0.006)PS(0.158)S(0.158)GT(0.158)T(0.158)VT(0.13)S(0.164)VVGFS(0.068)CDGMRPEAIR	46.145	0.028075	11550000.0	1151.4	854.08	1041.6	1064.9	1027.5	996.45	844.38	850.03	967.76	1236.7	True	False	1100.7858346474316	995.2022031222174	822.9823943062058	971.54187036391	1162.6342599471616	1188.9998599654289	1033.753709246799	820.133963098409	922.7690488315316	1012.7216461319821	1.0869579403697	0.9827006334102969	0.8126442220816829	0.959337517939549	1.1480294357168725	1.1740638353161787	1.020767861727008	0.8098315724077313	0.9111773727321638	1.0	9.98402197812148	-9.19949980340576	11.996203142881713	0.8954095772941905	1.0242834727498045	0.2099610211376871	0.10532656750152378	1.9264880743246957	371.03042600919525	0.05550713145372883	0.032034501007097746	6.316844652351962e-10	9.19949980340576	0.128873895455614	
LLQLVEDRGS(ph)GR	ddPTM_K562_Methotrexat_30min_R1	1	LLQLVEDRGSGR	12	1	J3KTA4;P17844-2;P17844	J3KTA4	DDX5	Probable ATP-dependent RNA helicase DDX5	1	LLQLVEDRGS(1)GR	95.755	0.0081899	5530000.0	2280.7	1691.2	2345.0	2413.1	1933.5	1914.8	1733.3	2443.6	2273.1	2652.6	True	False	2180.443158833071	1970.6420545151436	1852.816546321096	2201.547269579447	2187.7891402509376	2284.8080002627335	2122.0366472885166	2357.657202954334	2167.424077146146	2172.188435780461	1.0038001873670983	0.9072150565091732	0.8529722908939916	1.0135157858845876	1.0071820216945733	1.0518461302100655	0.9769118610218892	1.0853833691952395	0.9978066550047702	1.0	11.084933545987615	-7.380920186053044	7.551300470307307	1.0223271194399686	0.9201913954690961	0.5006534270437901	0.04464888954401064	0.206669795986332	11.968041698386816	0.012390136680686982	0.018411828607284037	4.159870529064398e-08	7.380920186053044	-0.10213572397087245	
LLQPGGGPDVGTGAPRPGCS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	5	LLQPGGGPDVGTGAPRPGCSPR	22	1	Q9NXH8	Q9NXH8	TOR4A	Torsin-4A	1	LLQPGGGPDVGTGAPRPGCS(1)PR;LLQPGGGPDVGTGAPRPGCS(1)PR;LLQPGGGPDVGT(0.001)GAPRPGCS(0.999)PR;LLQPGGGPDVGT(0.008)GAPRPGCS(0.992)PR;LLQPGGGPDVGT(0.035)GAPRPGCS(0.965)PR	112.42	1.2529000000000002e-05	207706000.0	8915.4	8854.21	9930.400000000001	10119.8	8639.8	8821.9	8627.5	9589.300000000001	9413.199999999999	10357.0	True	False	8523.489690998542	10317.217706663037	7846.144746945418	9232.612846003105	9776.085137801934	10526.607320617206	10562.436493671994	9252.038883733017	8975.582386605118	8481.246938618047	1.004980724259796	1.216474155431695	0.9251168847848552	1.088591443312873	1.152670734451563	1.2411626965707043	1.2453872137099995	1.0908819128476601	1.0582857039259392	1.0	13.050060674439992	-7.6349029212772175	4.925781105146715	1.1467252235388015	1.057030556406734	0.11061676265705966	0.09842133154982569	0.42311154815862284	16.510249203112203	0.029822609017415146	0.038786665619318546	2.3179127197759895e-08	7.6349029212772175	-0.08969466713206753	
LLQTCFS(ph)SPADDSMDR	ddPTM_K562_Methotrexat_30min_R1	2	LLQTCFSSPADDSMDR	16	0	Q9NZL4-2;Q9NZL4;Q9NZL4-3	Q9NZL4-2	HSPBP1	Hsp70-binding protein 1	1	LLQT(0.015)CFS(0.61)S(0.375)PADDSMDR;LLQT(0.247)CFS(0.469)S(0.283)PADDSMDR	82.663	0.015713	60845000.0	3596.0	3061.5	3945.8	4182.1	3525.8	3195.5	3231.9	4135.7	3999.7	4635.700000000001	True	False	3437.9241457288235	3567.360838397653	3117.6305025474526	3815.4617861291295	3989.5044999724614	3812.985149801319	3956.735845134572	3990.245086862925	3813.754820008552	3796.129809148563	0.9056392480161047	0.9397362623902946	0.8212655149552719	1.0050925489781664	1.0509399574160692	1.0044401381143857	1.0423078356274733	1.0511350473965748	1.0046428894021258	1.0	11.89031361100765	-7.407891991709614	6.301464256270548	1.0278925283804488	0.8946514088328712	0.7784612216624405	0.03277663544450198	0.10258404330547657	4.97831539128691	0.008934976536310115	0.0132983326866192	3.909381093386097e-08	7.407891991709614	-0.13324111954757756	
LLQTCFSS(ph)PADDSMDR	ddPTM_K562_Methotrexat_30min_R1	1	LLQTCFSSPADDSMDR	16	0	Q9NZL4-2;Q9NZL4;Q9NZL4-3	Q9NZL4-2	HSPBP1	Hsp70-binding protein 1	1	LLQT(0.008)CFS(0.237)S(0.756)PADDSMDR	80.488	0.018279	23298000.0	2057.7	1601.3	2157.4	1994.2	1582.7	1784.1	1615.3	1804.9	2107.4	2037.3	True	False	1967.2459718204107	1865.8876075538662	1704.591222615409	1819.3715821952383	1790.8527914534036	2128.8520750306793	1977.5721435211094	1741.4206439729405	2009.4274339790543	1668.3252281593657	1.1791741433957927	1.118419583939558	1.0217379644231928	1.090537715000881	1.0734434516879066	1.2760414091318424	1.1853636869730313	1.0438136489095833	1.2044578599317957	1.0	10.704184844017568	-6.263793379470048	7.879095908469626	1.116599974815826	1.1796906821242195	0.05328433152099199	0.08264656238934913	0.33334944345736517	248.86853362398156	0.020942399738976908	0.11562617251379473	5.447617677943522e-07	6.263793379470048	0.0630907073083935	
LLRLPGSGAVQAAS(ph)PER	ddPTM_K562_Methotrexat_30min_R1	2	LLRLPGSGAVQAASPER	17	1	Q86U90	Q86U90	YRDC	YrdC domain-containing protein, mitochondrial	1	LLRLPGSGAVQAAS(1)PER;LLRLPGSGAVQAAS(1)PER	132.66	1.7595e-05	121357000.0	2559.8	2081.8199999999997	2457.0	2861.6	2460.48	2111.45	2476.5	3504.3999999999996	3003.0	3661.0	True	False	2447.2742570179744	2425.8053701104054	1941.309276891655	2610.7279709206186	2784.076247119019	2519.4578296191507	3031.9181659320434	3381.1482656871694	2863.3911854603293	2997.9574241846744	0.8163138800023272	0.8091527086213135	0.6475439781869531	0.8708355728669607	0.9286577002927844	0.8403914642998452	1.0113279599881593	1.1278173060135128	0.9551140260902998	1.0	11.549764179504301	-8.26496196704729	0.944321858771197	1.0377324616500423	0.7690737025691683	0.6390466848458467	0.07636057941734414	0.35095456865420627	0.6671402930857632	0.047066597204052825	0.04300071006116501	5.432979082399106e-09	8.26496196704729	-0.268658759080874	
LLRQS(ph)PPLPGREEEPGLGDSGIQSTPGSGHAPR	ddPTM_K562_Methotrexat_30min_R1	1	LLRQSPPLPGREEEPGLGDSGIQSTPGSGHAPR	33	2	Q9C0B5-2;Q9C0B5	Q9C0B5-2	ZDHHC5	Palmitoyltransferase ZDHHC5	1	LLRQS(0.996)PPLPGREEEPGLGDS(0.004)GIQSTPGSGHAPR	55.707	0.001269	158330000.0	994.85	839.83	1136.3	1247.8	891.01	893.94	812.72	1334.5	1299.1	1495.6	True	False	951.1175851997555	978.5976328308027	897.8061584582777	1138.4073113344805	1008.1934325601176	1066.6812532665913	994.9931483207308	1287.5648785982	1238.705124552619	1224.732347339688	0.7765921976877095	0.7990297920655653	0.7330631549076452	0.9295151824864273	0.8231949084631208	0.870950502437199	0.8124168112992304	1.051303071560896	1.011408841485474	1.0	10.258250782170562	-9.258400480964887	24.983078034126073	1.0235169751072364	0.8226938868076225	0.7636844340899827	0.05102559069925053	125.81250728864433	1034327.3778470673	0.02594115771138889	0.014159152092271008	5.515685804189014e-10	9.258400480964887	-0.20082308829961393	
LLS(ph)PLSSAR	ddPTM_K562_Methotrexat_30min_R1	6	LLSPLSSAR	9	0	A0A087WZ13;E9PAU2;Q8IY67-2	A0A087WZ13	RAVER1	Ribonucleoprotein PTB-binding 1	1	LLS(1)PLSSAR;LLS(0.996)PLS(0.004)SAR;LLS(0.967)PLS(0.017)S(0.017)AR;LLS(1)PLSSAR;LLS(0.995)PLS(0.005)S(0.001)AR;LLS(0.952)PLS(0.047)S(0.001)AR	156.16	9.0738e-11	639492000.0	24385.999999999996	20700.9	28553.3	25887.5	20163.999999999996	19827.700000000004	20078.100000000002	24018.8	24175.699999999997	26822.0	True	False	23314.020638971924	24121.371869863127	22560.352533931833	23617.983067936657	22815.919433162606	23659.122407984883	24581.125026206402	23174.045190014553	23051.77698379397	21964.275889505967	1.0614518209594532	1.098209291815888	1.0271384609911343	1.0752907670050162	1.0387740323396473	1.0771637784466492	1.1191411521993633	1.0550789521400332	1.0495122670903796	1.0	14.422871317503285	-10.128794532908781	2.0742435184713774	1.0003153529979585	1.0698575414800542	0.40950213976862126	0.025197824409946612	0.5220266908120129	4.5771744384919355	0.024419747088992	0.006766054182061999	7.433707474763692e-11	10.128794532908781	0.0695421884820957	
LLS(ph)SNEDDANILSS(ph)PTDR	ddPTM_K562_Methotrexat_30min_R1	1	LLSSNEDDANILSSPTDR	18	0	H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448	H0YEG1	MED24	Mediator of RNA polymerase II transcription subunit 24	2	LLS(0.708)S(0.292)NEDDANILS(0.287)S(0.694)PT(0.019)DR	101.53	0.0018277999999999999	17752000.0	2016.4	1626.4	2205.7	2162.1	1571.4	1410.3	1599.3	1676.8	1571.5	2186.3	True	False	1927.7614703691886	1895.134955926815	1742.753712673962	1972.5520498768049	1778.0666433878048	1682.820515338696	1957.983736230615	1617.825993580713	1498.4413080089616	1790.3398843198447	1.0767572611507512	1.0585336184066425	0.9734205934511921	1.1017751808764418	0.9931447424930141	0.9399447166860188	1.0936380032523594	0.9036418211703583	0.8369591277793734	1.0	10.806017784372264	-9.282168625826024	23.460233787630557	0.9027252816388721	1.0299408107323027	0.43658166880647686	0.06217959595184214	336.2080820244299	380497.97693949105	0.03299423996643233	0.015888355527788493	5.221933948277037e-10	9.282168625826024	0.1272155290934306	
LLS(ph)WSDNWR	ddPTM_K562_Methotrexat_30min_R1	2	LLSWSDNWR	9	0	J3KSY6;J3KSX6;Q8TCD5	J3KSY6	NT5C	5(3)-deoxyribonucleotidase, cytosolic type	1	LLS(0.547)WS(0.453)DNWR;LLS(0.946)WS(0.054)DNWR	115.0	0.0039601	12642100.0	3644.0	2962.1	4133.4	2988.4	3081.9	2780.3	2570.5	3852.2	3188.1000000000004	4321.4	True	False	3483.814123202401	3451.5366779087653	3265.8558262531415	2726.411611790318	3487.2238693247273	3317.553626034303	3147.0000587637073	3716.7159425522536	3039.885926861831	3538.7525847778343	0.9844751899831159	0.97535405350342	0.9228833460416037	0.7704442586684778	0.9854387346335652	0.9374923921793706	0.8892964352186488	1.0502898559622225	0.8590275397997845	1.0	11.789025182567691														
LLSGEDVGQDEGATRALGK	ddPTM_K562_Methotrexat_30min_R1	1	LLSGEDVGQDEGATRALGK	19	1	P11277;P11277-3;P11277-2	P11277	SPTB	Spectrin beta chain, erythrocytic	0		53.395	0.021871	12952000.0	1595.3	1737.3	2210.2	2316.4	2171.8	2024.6	1925.7	1619.8	1530.2	1731.2	False	True	1525.1725221582842	2024.359295949124	1746.3092241700997	2113.3248084430106	2457.429767156445	2415.8252962878264	2357.5872449567273	1562.8307158886198	1459.061335994471	1417.66290432901	1.0758358122378602	1.4279553268745986	1.2318226137098793	1.4907103811418854	1.7334373070300264	1.7040900829885606	1.6630097590601698	1.1023993864241788	1.0292018868089485	1.0	10.469298810139207	-9.378470182515379	5.614440862427906	1.0326121607602792	1.4825090353080965	0.5099251671525802	0.19450054590857735	0.21168242406241075	8.8981386756386	0.12230757520394142	0.05703459116796649	4.1834040978670227e-10	9.378470182515379	0.44989687454781735	
LLSGPSQES(ph)PQTLGK	ddPTM_K562_Methotrexat_30min_R1	2	LLSGPSQESPQTLGK	15	0	E7EVL6;C9JZE3;C9JYJ8;Q9BWE0;Q9BWE0-4	E7EVL6	REPIN1	Replication initiator 1	1	LLS(0.005)GPS(0.025)QES(0.955)PQT(0.015)LGK;LLS(0.008)GPS(0.255)QES(0.736)PQT(0.001)LGK	201.4	5.9705e-13	14951800.0	4208.6	3241.5	6165.799999999999	4238.2	3565.3	3640.9	2834.12	4285.0	4172.2	5809.4	True	False	4023.594983235354	3777.102778920791	4871.682840642479	3866.6435862299977	4034.1994423256606	4344.452396154474	3469.743554383738	4134.294121238879	3978.235332659871	4757.261365763028	0.84577967739849	0.7939657900875019	1.0240519631111542	0.8127877131278487	0.8480087874420593	0.9132255014241071	0.7293573523949567	0.8690491867847521	0.8362448532448443	1.0	12.215915574358455														
LLSNS(ph)QTLGNDMLMNTPR	ddPTM_K562_Methotrexat_30min_R1	1	LLSNSQTLGNDMLMNTPR	18	0	H3BU04;Q9BVW5	H3BU04	TIPIN	TIMELESS-interacting protein	1	LLS(0.08)NS(0.81)QT(0.063)LGNDMLMNT(0.047)PR	73.597	0.010069	0.0	1409.5	1235.4	1118.0	1246.2	1257.5	803.74	999.1	1235.7	1249.3	1244.4	True	False	1347.5400676876454	1439.5288517904503	883.3470783739809	1136.9475808503194	1422.883291370858	959.0513798470698	1223.1736077458934	1192.2397305985724	1191.220315682848	1019.027101517457	1.322379027683358	1.4126502127831677	0.8668533712779259	1.1157186881067875	1.3963154554496238	0.9411441348507061	1.2003347172263006	1.169978432195945	1.168978051622939	1.0	9.992976705846775	-6.717619428440148	24.99970994958456	1.1214801877756864	1.367515304400902	0.34490744395983053	0.14233126204242985	156.40113852483353	89226.26348948038	0.0356284309047439	0.09426276635933493	1.9159341196186213e-07	6.717619428440148	0.2460351166252157	
LLSNSQT(ph)LGNDMLMNTPR	ddPTM_K562_Methotrexat_30min_R1	1	LLSNSQTLGNDMLMNTPR	18	0	H3BU04;Q9BVW5	H3BU04	TIPIN	TIMELESS-interacting protein	1	LLS(0.006)NS(0.066)QT(0.891)LGNDMLMNT(0.037)PR	91.20200000000001	0.0031838	0.0	1171.5	1008.3	1167.0	1137.1	1011.3	971.31	1302.3	1307.7	1368.2	1451.0	True	False	1120.0022627144929	1174.9044368304271	922.062647998601	1037.4122084616422	1144.3036759947104	1159.00191076624	1594.3739259007884	1261.7074497885847	1304.592680634974	1188.2098395225244	0.9425963541629647	0.9888021439904555	0.7760099414503476	0.8730883838485302	0.9630484767358454	0.975418543270083	1.3418285835282082	1.0618557495665875	1.0979480536528947	1.0	10.2145739252665	-8.538460028211626	24.929872138933987	1.1345714956679624	0.9103501466333256	0.5190452940956936	0.09853995211624804	183.4218567132757	293470.051731194	0.03777792852179405	0.029272302430036323	2.8942761894837345e-09	8.538460028211626	-0.22422134903463686	
LLSNSQTLGNDMLMNT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	LLSNSQTLGNDMLMNTPR	18	0	H3BU04;Q9BVW5	H3BU04	TIPIN	TIMELESS-interacting protein	1	LLS(0.007)NS(0.081)QT(0.081)LGNDMLMNT(0.832)PR;LLSNSQTLGNDMLMNT(1)PR	109.39	0.00043641	28258000.0	4178.2	3485.4	4115.7	3898.3	3375.5	3573.5	3243.3	3673.7	3998.7	4703.0	True	False	3994.531330835418	4061.3031083296396	3251.870814368328	3556.542091501204	3819.437415524713	4264.02830005164	3970.692585329052	3544.4938887270164	3812.801309790284	3851.2411269982313	1.0372062405629925	1.0545439702175015	0.8443695699996147	0.9234794639496582	0.9917419578715636	1.1071828949269524	1.0310163540510184	0.9203510691343539	0.9900188495239953	1.0	11.911107738057737														
LLSRPQDALEGVVLSPS(ph)LEAR	ddPTM_K562_Methotrexat_30min_R1	3	LLSRPQDALEGVVLSPSLEAR	21	1	Q9NVI7-3;Q9NVI7-2;Q9NVI7	Q9NVI7-3	ATAD3A	ATPase family AAA domain-containing protein 3A	1	LLSRPQDALEGVVLS(0.139)PS(0.861)LEAR;LLSRPQDALEGVVLS(0.394)PS(0.606)LEAR;LLSRPQDALEGVVLS(0.248)PS(0.752)LEAR	116.08	1.2785e-05	25953800.0	2730.1600000000003	2243.54	3003.0699999999997	2622.31	2492.7799999999997	1963.1	2117.94	3460.1000000000004	3401.82	3645.2	True	False	2610.14543540128	2614.2468513404133	2372.7666463797405	2392.416153698925	2820.6242632711287	2342.4412916836104	2592.941958552033	3338.4063217966514	3243.6701307101766	2985.0189572898034	0.874415028094534	0.8757890280582921	0.794891650716367	0.8014743584312369	0.9449267504257547	0.7847324674314262	0.8686517558689979	1.118386974944943	1.0866497590538624	1.0	11.543524378464108	-9.220296399184985	6.708113299624736	1.0768400451987077	0.8468701469432153	0.7826108855494018	0.0528668821487377	0.08866312497769004	11.484290226200386	0.025027142736071335	0.01411856810277109	6.021484888896328e-10	9.220296399184985	-0.2299698982554924	
LLSRPQDVLEGVVLS(ph)PSLEAR	ddPTM_K562_Methotrexat_30min_R1	1	LLSRPQDVLEGVVLSPSLEAR	21	1	J3QSF3;A0A5K1VW56;Q5T2N8;Q5T9A4-3;Q5T9A4	J3QSF3	ATAD3C;ATAD3B	ATPase family AAA domain-containing protein 3C;ATPase family AAA domain-containing protein 3B	1	LLSRPQDVLEGVVLS(0.789)PS(0.211)LEAR	72.935	0.0043349	4930300.0	592.1	554.26	822.45	734.45	610.05	526.97	621.93	892.33	619.83	730.04	True	False	566.0719929605215	645.8420441908488	649.8289844442579	670.0619088071874	690.2822679131546	628.7994944111413	761.4136341361254	860.9462481225413	591.0142385893694	597.8226817677626	0.9468894543891271	1.0803237546643312	1.0869928563478264	1.1208372135125642	1.1546605523095725	1.0518160544725073	1.2736446062645603	1.4401364725351704	0.9886112665410074	1.0	9.223573824584474	-5.504420467246784	0.5537117572145676	1.18136556136716	0.5487588856078882	0.16584362959243804	0.12784039121555404	13.444217485941099	1.6893667767590776	0.06674427198275007	6.566351627884615	3.130253665348317e-06	5.504420467246784	-0.6326066757592719	
LLSS(ph)NEDDANILSS(ph)PTDR	ddPTM_K562_Methotrexat_30min_R1	1	LLSSNEDDANILSSPTDR	18	0	H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448	H0YEG1	MED24	Mediator of RNA polymerase II transcription subunit 24	2	LLS(0.121)S(0.878)NEDDANILS(0.308)S(0.683)PT(0.008)DR	127.07	3.7833e-05	15786000.0	2974.8	2338.2	2867.2	2958.1	1948.4	2108.0	2082.5	2590.3	2674.3	3279.6	True	False	2844.031353924944	2724.5478073955233	2265.413902606331	2698.767965746534	2204.6487514170794	2515.341165946231	2549.553636403586	2499.197680803983	2549.9723767154733	2685.6326600262364	1.0589800296430563	1.0144901229228076	0.8435308135492363	1.0048909539699185	0.8209048036359305	0.9365916654892252	0.9493307384706436	0.9305806106705479	0.9494866571553245	1.0	11.391046271556755	-6.568949481735457	9.01653893223125	0.9267305937007932	1.048015724051087	0.38398351144615717	0.05555384171185434	0.2366719976950428	43.336340870516835	0.013201466430574554	0.0352220503106484	2.698053258769737e-07	6.568949481735457	0.12128513035029376	
LLSSES(ph)EDEEEFIPLAQR	ddPTM_K562_Methotrexat_30min_R1	2	LLSSESEDEEEFIPLAQR	18	0	D6RIT8;F8W714;Q96AY2;Q96AY2-2	D6RIT8	EME1	Crossover junction endonuclease EME1	1	LLS(0.003)S(0.018)ES(0.979)EDEEEFIPLAQR;LLSS(0.004)ES(0.996)EDEEEFIPLAQR	195.15	1.0818e-15	20193000.0	719.18	1089.92	960.47	869.03	772.62	893.9100000000001	799.85	972.78	1198.5900000000001	959.02	True	False	687.5657083218169	1270.0107545276403	758.8804725991569	792.8434891561169	874.2330724285899	1066.6454561911746	979.2367232064385	938.5667760230469	1142.867812514452	785.3321849061963	0.8755093978530155	1.6171637670488905	0.9663178043439046	1.009564493082399	1.1132016352201488	1.3582092733390008	1.246907667897761	1.1951207324263091	1.455266745053829	1.0	9.61715921339197	-8.236873633705374	23.922592586480768	1.2630338651915276	1.12990650028009	0.08623327052223195	0.21534413298666202	1231.7627807227964	1199513.678820066	0.06916882474383276	0.06913142168171421	5.795973168304788e-09	8.236873633705374	-0.1331273649114375	
LLSSNEDDANILSS(ph)PTDR	ddPTM_K562_Methotrexat_30min_R1	3	LLSSNEDDANILSSPTDR	18	0	H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448	H0YEG1	MED24	Mediator of RNA polymerase II transcription subunit 24	1	LLSSNEDDANILS(0.229)S(0.771)PTDR;LLSSNEDDANILS(0.085)S(0.914)PT(0.001)DR;LLSSNEDDANILS(0.021)S(0.918)PT(0.061)DR	232.37	3.4021999999999996e-56	237525100.0	5590.53	5428.58	6557.959999999999	6355.33	5581.2699999999995	5585.7699999999995	4794.27	6116.339999999999	6464.160000000001	6589.650000000001	True	False	5344.776995111608	6325.560574917115	5181.5338158259665	5798.168086186372	6315.304833104911	6665.140998343208	5869.507088787812	5901.224855425482	6163.642612522563	5396.200529985942	0.9904704181046311	1.1722248904144403	0.9602189145923873	1.0744908485084557	1.1703243417311187	1.235154431586806	1.087711076742195	1.093588872880685	1.1422189702313787	1.0	12.39772824641023	-6.2375307573207905	22.8582827771725	1.107165167266701	0.9904699810528441	0.1597264562681615	0.07780734997491645	3981.929136224046	3806808.91487206	0.019878425846068606	0.9984962028667881	5.787210010961338e-07	6.2375307573207905	-0.11669518621385677	
LLYNS(ph)PEYEASFPR	ddPTM_K562_Methotrexat_30min_R1	2	LLYNSPEYEASFPR	14	0	Q7Z2Z1-2;Q7Z2Z1	Q7Z2Z1-2	TICRR	Treslin	1	LLY(0.008)NS(0.99)PEY(0.002)EASFPR;LLYNS(1)PEYEASFPR	159.14	6.7788e-08	22465200.0	2705.2	2752.2	3040.8	3112.1000000000004	2564.5	2572.19	1995.54	2531.8999999999996	2398.7	2702.8999999999996	True	False	2586.2826471150183	3206.9542705987355	2402.5776349906987	2839.2670248469594	2901.7767003742047	3069.2293138687087	2443.090642779741	2442.8516419054195	2287.184960560672	2213.3786183634957	1.168477288818863	1.4488954777063219	1.0854797344916483	1.2827751209353537	1.311016866386687	1.386671619760203	1.103783429780345	1.103675449666894	1.03334555669095	1.0	11.112034542901728	-8.898364303544497	6.125589998035956	1.0614842561326336	1.2803151171840457	0.5471522287268393	0.09885899655288345	0.16758550101121575	8.641485536573374	0.0410409342246483	0.02749530010083266	1.2636758809891351e-09	8.898364303544497	0.21883086105141203	
LMCLLS(ph)ITENGLIPKDY(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LMCLLSITENGLIPKDYR	18	1	F5H008;A0A2R8YDQ0;Q9H267-2;Q9H267	F5H008	VPS33B	Vacuolar protein sorting-associated protein 33B	2	LMCLLS(0.5)IT(0.5)ENGLIPKDY(1)R	58.123000000000005	0.023133	93418000.0	1644.7	1549.2	1334.3	1821.6	1652.4	1565.0	1616.1	1765.6	1853.5	1983.6	True	False	1572.4009573081744	1805.1789681024493	1054.2486642883737	1661.9031562164523	1869.719563150063	1867.4141009041036	1978.5515638856364	1703.502847248394	1767.3311895606796	1624.3508185230053	0.9680180779777191	1.1113233345391902	0.6490276929505808	1.0231183665900405	1.151056497050414	1.1496371840426145	1.2180568023382412	1.0487284075723002	1.0880230855349855	1.0	10.665647536325864	-7.519969195956986	23.60757519944371	1.1162320249335402	0.9140480737699093	0.35723225061192276	0.11984381175588037	60.42344699960501	490270.55462111824	0.03519852547721475	0.046416778806492504	3.0201659299436796e-08	7.519969195956986	-0.20218395116363097	
LMRSS(ph)TDS(ph)LPGPISR	ddPTM_K562_Methotrexat_30min_R1	1	LMRSSTDSLPGPISR	15	1	Q9HCD5	Q9HCD5	NCOA5	Nuclear receptor coactivator 5	2	LMRS(0.415)S(0.544)T(0.102)DS(0.782)LPGPIS(0.158)R	92.8	0.024572	0.0	1530.7	1324.6	1483.4	1568.5	1235.2	1210.5	1137.5	1452.9	1488.9	1443.7	True	False	1463.4122608084288	1543.4676356496923	1172.0546118604327	1430.9920402533505	1397.6504504980383	1444.411993063527	1392.6133308086821	1401.8006834884413	1419.6813639799825	1182.23194026097	1.237838541636246	1.3055539975590422	0.9913914283196487	1.2104156481658483	1.1822134074549837	1.2217670186991245	1.1779527209366984	1.185723914022322	1.2008484254507596	1.0	10.207297388060729	-12.709681669569635	2.563010951975155	0.965984789289824	1.1887098089439734	0.3643665903589398	0.0754180635235339	9469688.24617267	7174277.023189584	2063944.5444733151	0.01958408507165536	1.951274326432947e-13	12.709681669569635	0.22272501965414937	
LMTGDT(ph)YTAHAGAK	ddPTM_K562_Methotrexat_30min_R1	1	LMTGDTYTAHAGAK	14	0	P00519-2;P00519;P42684-8;P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5	P00519-2;P42684-2	ABL1;ABL2	Tyrosine-protein kinase ABL1;Abelson tyrosine-protein kinase 2	1	LMT(0.048)GDT(0.475)Y(0.475)T(0.001)AHAGAK	122.39	0.0021428000000000003	17326000.0	4733.2	3776.1	7493.3	4972.2	4343.7	4185.0	3810.8	5340.2	5416.1	8032.7	True	False	4525.134195373653	4400.0363422744995	5920.558732003356	4536.294945838516	4914.972686065679	4993.69202062855	4665.468906413821	5152.382139145824	5164.306693164068	6577.900191545544	0.6879298961072298	0.6689119953400611	0.9000681919152473	0.6896266002437881	0.7471947799364309	0.7591620236267574	0.7092641679802719	0.7832867615972781	0.7850995823563358	1.0	12.683411402556487	-10.595631505306047	0.9814207248283008	1.0010096158001462	0.7403965799248818	0.6092193084836243	0.061842963683377605	1.6192710163079198	2.084997786916038	0.06169259191824059	0.019099802264697083	2.537280575599392e-11	10.595631505306047	-0.2606130358752644	
LMTGDTY(ph)TAHAGAK	ddPTM_K562_Methotrexat_30min_R1	3	LMTGDTYTAHAGAK	14	0	P00519-2;P00519;P42684-8;P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5	P00519-2;P42684-2	ABL1;ABL2	Tyrosine-protein kinase ABL1;Abelson tyrosine-protein kinase 2	1	LMTGDT(0.001)Y(0.995)T(0.005)AHAGAK;LMT(0.004)GDT(0.014)Y(0.959)T(0.023)AHAGAK;LMT(0.001)GDT(0.004)Y(0.988)T(0.006)AHAGAK	127.79	0.00031117	146362000.0	19718.199999999997	17484.1	29972.2	21824.4	17334.1	16080.900000000001	14689.4	20489.800000000003	19111.3	27057.4	True	False	18851.411537906035	20373.050346114145	23681.444814347607	19911.088736566933	19613.83798087601	19188.30633560947	17983.87187831301	19769.162120270797	18222.819834394933	22157.04266843332	0.8508090100292693	0.9194841861788354	1.0687998921483357	0.8986347607180378	0.8852191275877912	0.8660138730042097	0.8116548831642708	0.89222927518371	0.8224391723700838	1.0	14.435477715255027	-7.510833084159763	24.070572389893922	0.872110021180074	0.9503498377428305	0.15112777203922845	0.06926986351172583	559.5136624816715	1118064.402961098	0.01973181699339539	0.027553380111993084	3.084373164056845e-08	7.510833084159763	0.07823981656275658	
LMTHVDKAEGT(ph)T(ph)YRDELLTK	ddPTM_K562_Methotrexat_30min_R1	1	LMTHVDKAEGTTYRDELLTK	20	2	A0A2R8Y611;O14617-3;O14617-4;O14617-2;O14617;O14617-5;A0A2R8Y4J3	A0A2R8Y611	AP3D1	AP-3 complex subunit delta-1	2	LMTHVDKAEGT(0.672)T(0.672)Y(0.623)RDELLT(0.033)K	43.946000000000005	0.030277999999999996	5040000.0	1362.5	653.43	1661.8	1293.5	872.75	686.58	672.0	968.62	980.78	1652.3	True	False	1302.6061314114345	761.3982010890674	1313.0108898406804	1180.1008632883068	987.5319225001315	819.2518679864156	822.7131062008208	934.5530855809578	935.1837518733881	1353.0524588856417	0.9627166506790474	0.5627262979265018	0.9704064917941622	0.8721767256978522	0.7298548670562642	0.6054841869628188	0.6080422830600358	0.6906998168797127	0.6911659231923606	1.0	10.402002059458443	-7.907250277271767	5.44179280798534	0.6902768922988651	0.8302933800230972	0.12139012978655483	0.14850618121013257	0.37948073422289036	17.770539143714597	0.04482111435142573	0.05105261109951977	1.2380828926576385e-08	7.907250277271767	0.14001648772423203	
LNECIS(ph)PVANEMNHLPAHSHDLQR	ddPTM_K562_Methotrexat_30min_R1	2	LNECISPVANEMNHLPAHSHDLQR	24	0	P23497-2;P23497-3;P23497;P23497-4;P23497-5	P23497-2	SP100	Nuclear autoantigen Sp-100	1	LNECIS(1)PVANEMNHLPAHSHDLQR;LNECIS(1)PVANEMNHLPAHSHDLQR	90.29899999999999	0.0016542000000000002	81232000.0	3959.0	3389.1000000000004	4504.6	3980.7	3204.2	3187.1	2665.0	3989.1	3938.4	4421.3	True	False	3784.967100372752	3949.0911701497585	3559.1460190012813	3631.718211435456	3625.6084629904576	3802.9619686846468	3262.6940893231963	3848.801091956595	3755.3046436286922	3620.5597267270437	1.0454093803320106	1.0907405120256652	0.9830375101196632	1.0030819778019515	1.001394462913053	1.0503795699353076	0.9011573722256048	1.0630403535521509	1.0372165982809118	1.0	11.821997035161328	-6.7618853693144825	24.999999803873777	1.00489204387272	1.0680749526763702	0.25345786623675104	0.043359686204057724	15.129172071925343	848287.170571114	0.011031870974211858	0.025528483296401127	1.7302729991556565e-07	6.7618853693144825	0.06318290880365018	
LNFSFS(ph)EDS(ph)VTVEVTAR	ddPTM_K562_Methotrexat_30min_R1	1	LNFSFSEDSVTVEVTAR	17	0	H3BM00;B8ZZ60;E7EMA9;Q32M88	H3BM00	ATHL1	Acid trehalase-like protein 1	2	LNFS(0.033)FS(0.968)EDS(0.977)VT(0.022)VEVTAR	82.663	0.023548	11945000.0	2727.7	3164.2	2608.9	2627.6	2966.0	2869.3	2705.7	3157.9	3412.9	2786.5	True	False	2607.7935740557587	3687.0302677961317	2061.3275427279773	2397.242387612182	3356.080987837744	3423.7516164371564	3312.522100368395	3046.8348670852392	3254.235023928591	2281.8378482629323	1.1428478916856264	1.6158160715069714	0.9033628503871034	1.0505752586394788	1.4707797884904872	1.5004359836714583	1.4516904007399472	1.3352547681706073	1.4261464838116802	1.0	11.155980559277861	-7.77215132959503	24.99850410637664	1.3920151754911572	1.1897846386844657	0.14326406328993202	0.21557024047130713	391.24765258286646	913052.7895776073	0.06681652384792103	0.07651871367166989	1.6898520013473783e-08	7.77215132959503	-0.20223053680669145	
LNGPGENVS(ph)EDEAQSSNQR	ddPTM_K562_Methotrexat_30min_R1	4	LNGPGENVSEDEAQSSNQR	19	0	G3V0E9;H0Y9K3;D6R9W6;A0A3B3IT29;A0A3B3ISF8;D6RJB0;A0A3B3ISF0;Q659C4-3;Q659C4-9;Q659C4-2;Q659C4	G3V0E9	LARP1B	La-related protein 1B	1	LNGPGENVS(1)EDEAQSSNQR;LNGPGENVS(1)EDEAQSSNQR;LNGPGENVS(1)EDEAQSSNQR;LNGPGENVS(1)EDEAQSSNQR	369.88	0.0	132066000.0	5125.1	4121.72	5504.08	5690.8	4210.549999999999	3771.43	3921.58	4572.110000000001	5000.24	5167.29	True	False	4899.806740621467	4802.764172738975	4348.848825703633	5191.896399536992	4764.3111272219185	4500.2054712925	4801.094141391392	4411.306299803381	4767.779933794924	4231.443708936147	1.157951535612737	1.1350178575213674	1.0277458770205414	1.2269799048897942	1.1259304045946394	1.063515381709739	1.1346231857586178	1.0425061995950442	1.1267501736407644	1.0	12.04693425920491	-15.999999777333738	0.13706940701237227	0.5943258060350274	1.1584835712783674	0.3233107604506551	0.053932379948943183	169.44107788594417	1.433623162869301	18.627584726684706	0.3491784067405205	1.0000005127081477e-16	15.999999777333738	0.56415776524334	
LNHVAAGLVS(ph)PSLK	ddPTM_K562_Methotrexat_30min_R1	2	LNHVAAGLVSPSLK	14	0	Q5T757;Q05519-2;Q05519;Q5T760	Q5T757	SRSF11	Serine/arginine-rich splicing factor 11	1	LNHVAAGLVS(0.973)PS(0.027)LK;LNHVAAGLVS(0.934)PS(0.066)LK	114.21	0.0011160999999999999	163576000.0	18485.0	13260.2	22661.0	16722.4	14177.8	12441.7	10961.8	18088.699999999997	17836.199999999997	21279.0	True	False	17672.421533314042	15451.2226651382	17904.765780887985	15256.373155200921	16042.42920747336	14845.882440395266	13420.262689809757	17452.510168227243	17006.998955080777	17425.166902274166	1.0141895129284304	0.8867187758828098	1.027523344901289	0.8755367016432885	0.9206470903518092	0.8519793539801173	0.770165517786706	1.0015691824420636	0.9760020693323279	1.0	14.08888485417572														
LNHVAAGLVS(ph)PSLKSDTSSK	ddPTM_K562_Methotrexat_30min_R1	1	LNHVAAGLVSPSLKSDTSSK	20	1	Q5T757;Q05519-2;Q05519;Q5T760	Q5T757	SRSF11	Serine/arginine-rich splicing factor 11	1	LNHVAAGLVS(1)PSLKSDTSSK	94.325	0.00052251	16331000.0	1733.2	856.71	2729.8	1869.2	969.4	868.64	929.35	1365.7	1569.6	2286.7	True	False	1657.0106032750814	998.2667659198612	2156.852284924232	1705.3301381202195	1096.8930915744804	1036.4923863318481	1137.7803947138889	1317.6675569138715	1496.6296385942499	1872.5564714239524	0.884892193406075	0.5331036906784162	1.1518222909902909	0.9106962402172211	0.5857730371892963	0.5535172915472428	0.6076080545911035	0.703673067820419	0.7992440609580999	1.0	10.870793511925445	-3.3429419724933416	9.837916624090736	0.756588422394259	0.9513270519743862	0.0	0.20071023335294702	0.0	0.0	0.04731475000440262	0.0	0.0004540022733269952	3.3429419724933416	0.1947386295801271	
LNLAQFLNEDLS(ph)	ddPTM_K562_Methotrexat_30min_R1	2	LNLAQFLNEDLS	12	0	Q9BPX3	Q9BPX3	NCAPG	Condensin complex subunit 3	1	LNLAQFLNEDLS(1);LNLAQFLNEDLS(1)	136.01	8.057699999999999e-06	127678000.0	3400.69	2763.94	3515.0600000000004	3425.3	3261.83	2937.43	3164.23	4084.9	3908.7	4755.6	True	False	3251.1997394712307	3220.6341060528525	2777.296942137071	3125.009267121328	3690.8178181250123	3505.046774708462	3873.889125050335	3941.2317516566404	3726.9853901461174	3894.314757293808	0.834857976844819	0.8270091933428869	0.7131670435563452	0.8024542087329692	0.947745122864643	0.9000419825191913	0.9947550124947613	1.0120475609412312	0.9570323978475821	1.0	11.927153779001532	-7.789208676483283	3.5102850144826974	0.9705186555401952	0.7883599045190802	0.8059234534731936	0.04203568265958784	0.105792118628271	2.727100777154943	0.014349090876942297	0.017420009265974788	1.6247678747363107e-08	7.789208676483283	-0.182158751021115	
LNLGTDSDS(ph)SPQK	ddPTM_K562_Methotrexat_30min_R1	2	LNLGTDSDSSPQK	13	0	Q16512;Q16512-2;K7EN76;Q16512-3	Q16512	PKN1	Serine/threonine-protein kinase N1	1	LNLGT(0.002)DS(0.013)DS(0.935)S(0.05)PQK;LNLGT(0.001)DS(0.004)DS(0.497)S(0.497)PQK	164.2	6.5397e-05	87571000.0	7625.3	5178.0	10980.2	7019.9	5049.9	4618.1	4497.6	7063.3	6571.5	8690.3	True	False	7290.100942276412	6033.576489048851	8675.606073311255	6404.476266097866	5714.050364289221	5510.482466060857	5506.301289358353	6814.879735483449	6265.992399351506	7116.402459271252	1.0244081871422077	0.8478408189503539	1.2190999768441528	0.8999598185673312	0.8029408675228807	0.7743354170310869	0.7737478762439498	0.9576298943864565	0.8805000047725193	1.0	12.796932387394225	-7.506306837191347	24.869800005393742	0.8534579883417799	1.0200789733509144	0.3152411815203141	0.10840561071947645	796.2624756539984	1194967.87887967	0.030620564284403504	0.04408758503720927	3.1166868083889304e-08	7.506306837191347	0.16662098500913447	
LNLGTDSDSS(ph)PQK	ddPTM_K562_Methotrexat_30min_R1	1	LNLGTDSDSSPQK	13	0	Q16512;Q16512-2;K7EN76;Q16512-3	Q16512	PKN1	Serine/threonine-protein kinase N1	1	LNLGTDSDS(0.02)S(0.979)PQK	215.09	1.9568000000000002e-18	58995000.0	2185.1	1498.1	2623.0	1886.4	1564.1	1553.8	1031.8	1723.2	1728.4	2521.9	True	False	2089.045620364864	1745.6355616539367	2072.468145415878	1721.0222408249424	1769.806565433923	1854.049859415205	1263.2074151458446	1662.5940792809427	1648.04706125529	2065.159472289356	1.0115662487067059	0.8452788199057542	1.0035390357135083	0.8333604566223081	0.8569830026114079	0.8977756363579404	0.6116754817706652	0.805068132311281	0.7980241155073262	1.0	11.012037475990947	-7.657203270340014	1.1950720172002747	0.7985368715501098	0.9463176768126494	0.19945364162730883	0.10344189147629883	0.6828243673169679	2.0387901060923714	0.04036858198101754	0.06611486011120474	2.201895630627937e-08	7.657203270340014	0.14778080526253967	
LNQPGT(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	3	LNQPGTPTR	9	0	M0R1B6;G5E9C7;P36507	M0R1B6	MAP2K2	Dual specificity mitogen-activated protein kinase kinase 2	1	LNQPGT(0.946)PT(0.054)R;LNQPGT(0.713)PT(0.287)R;LNQPGT(0.719)PT(0.281)R	115.0	0.0093084	403460000.0	6845.200000000001	5844.2	7032.6	7080.5	5966.5	5408.2	5608.2	6751.7	6807.799999999999	7341.9	True	False	6544.2932042110515	6809.854715585033	5556.553366165347	6459.763558185436	6751.199330389047	6453.258108951808	6865.981610409889	6514.238884100012	6491.30686392835	6012.2107655344025	1.0885002970499411	1.132670656628208	0.9242113396986751	1.0744406359166039	1.1229146138872859	1.0733585964660044	1.1420061401988455	1.08350141705669	1.0796871761616231	1.0	12.553679870273887														
LNQPGTPT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LNQPGTPTR	9	0	M0R1B6;G5E9C7;P36507	M0R1B6	MAP2K2	Dual specificity mitogen-activated protein kinase kinase 2	1	LNQPGT(0.015)PT(0.985)R	97.45200000000001	0.022012999999999998	142060000.0	1405.6	1356.8	1896.3	1588.9	1620.7	1256.1	1250.5	1508.0	1633.9	1947.6	True	False	1343.811507017918	1580.9881383432755	1498.2925444727898	1449.6036039263947	1833.850457514712	1498.8235476968978	1530.9564572978081	1454.9627852574627	1557.940345628916	1594.870767370136	0.842583320549412	0.9912954520761877	0.9394444836075345	0.9089160285486455	1.1498426675276279	0.9397774279657684	0.9599250852294952	0.9122762891043675	0.9768442544080757	1.0	10.63922381158152	-6.256472545306985	24.244457749605573	0.9732858463198971	0.8425832381444122	0.27122080050835595	0.06521899133329949	487.7207754416404	2380574.014322882	0.01633408003349875	0.12981192034100617	5.540225663469978e-07	6.256472545306985	-0.13070260817548496	
LNQS(ph)AENGSSLPSAASSCAEAR	ddPTM_K562_Methotrexat_30min_R1	2	LNQSAENGSSLPSAASSCAEAR	22	0	Q8NB90-3;Q8NB90-2;Q8NB90	Q8NB90-3	SPATA5	Spermatogenesis-associated protein 5	1	LNQS(0.807)AENGS(0.164)S(0.01)LPS(0.019)AASSCAEAR;LNQS(0.995)AENGS(0.004)S(0.001)LPSAASSCAEAR	153.6	1.3701e-37	11723000.0	1367.51	991.6	1314.54	1493.2	1211.95	1096.11	1016.6099999999999	1494.0100000000002	1186.12	1671.96	True	False	1307.39589781024	1155.4450456818922	1038.6360182519966	1362.2934743425587	1371.3426679736863	1307.9177444996787	1244.610670974429	1441.4648214870708	1130.9775400926437	1369.151842376348	0.954894743844538	0.8439130050590016	0.7585981233822127	0.9949907907789938	1.0016001334034184	0.9552758898016824	0.9090377213488893	1.0528158943899268	0.8260424483888357	1.0	10.419066738632354	-7.283049459524818	24.98275963558075	0.9640840984062446	0.8516130469770954	0.32508447663998086	0.07284732654987924	860.0556288434424	994281.9075255853	0.01992577280854677	0.02958456520850432	5.211353583478714e-08	7.283049459524818	-0.11247105142914926	
LNSEASPS(ph)REAINGQR	ddPTM_K562_Methotrexat_30min_R1	2	LNSEASPSREAINGQR	16	1	Q13111;Q13111-3;Q13111-2;K7EJF1	Q13111;K7EJF1	CHAF1A	Chromatin assembly factor 1 subunit A	1	LNSEAS(0.256)PS(0.744)REAINGQR;LNSEAS(0.025)PS(0.975)REAINGQR	179.9	4.8463e-07	62405000.0	5666.2	5037.0	6953.2	5222.3	5794.9	5053.4	4369.8	6287.9	6321.299999999999	7080.0	True	False	5417.1206325163075	5869.278635639059	5493.818341100146	4764.469067143814	6557.0309225964065	6029.898030357065	5349.838886125521	6066.750992984354	6027.4241427407205	5797.743393397296	0.9343498435418067	1.0123384629825511	0.9475787333666281	0.8217799139868424	1.1309625965964305	1.0400422407835703	0.9227450273529064	1.0463986729549664	1.0396155424203481	1.0	12.501275766170115	-7.765642245320178	24.999998563103805	1.0274238891957679	0.9362898697949792	0.36493770916687307	0.06490382418058423	138.2924593792564	822607.9938490026	0.020731672879090664	0.024351631097458047	1.7153697796855184e-08	7.765642245320178	-0.09113401940078869	
LNSSSSSSSNSSNEREDFDSTSSSSS(ph)TPPLQPR	ddPTM_K562_Methotrexat_30min_R1	2	LNSSSSSSSNSSNEREDFDSTSSSSSTPPLQPR	33	1	A0A669KAU9;A0A669KAX4;K4DI93;Q13620-1;Q13620	A0A669KAU9	CUL4B	Cullin-4B	1	LNSSSSSSSNSSNEREDFDS(0.03)T(0.03)S(0.03)S(0.03)S(0.129)S(0.129)S(0.58)T(0.04)PPLQPR;LNSSSSSSSNSSNEREDFDS(0.042)T(0.042)S(0.042)S(0.042)S(0.137)S(0.137)S(0.47)T(0.089)PPLQPR	89.684	3.2015e-07	33750000.0	1500.31	1168.31	1538.46	1565.1599999999999	1336.84	1147.42	1288.44	1498.52	1275.27	1515.47	True	False	1434.3581688204704	1361.3533696254663	1215.558270299851	1427.944852867666	1512.6578920367538	1369.1426758206944	1577.405468085396	1445.8162022307786	1215.9829760512805	1241.0036977954512	1.1558049112734303	1.0969776899487143	0.9794960905106068	1.1506370653079452	1.2188987790478591	1.103254307987053	1.2710723351489903	1.1650377873967348	0.9798383181382794	1.0	10.277291698908126	-5.1476023996544775	17.276412874228825	1.1207896096419183	53.87816170071724	0.0	0.09569790966690853	0.0	0.0	0.02213347627365706	0.0	7.118649339067659e-06	5.1476023996544775	52.757372091075325	
LNTS(ph)T(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	LNTSTK	6	0	A0A075B754;Q96QE3-2;Q96QE3	A0A075B754	ATAD5	ATPase family AAA domain-containing protein 5	2	LNT(0.331)S(0.834)T(0.834)K	42.718999999999994	0.033904000000000004	3926100.0	0.0	129.77	223.21	154.29	262.53	158.49	167.37	120.95	0.0	235.03	True	False	0.0	151.2122867871513	176.36127134513083	140.7636352506787	297.05729660722966	189.11594942638436	204.906983013142	116.6961199448874	0.0	192.46378951273527	0.0	0.7856661617750472	0.9163348170148186	0.7313772403996255	1.5434451195172663	0.9826053508827468	1.0646521277166443	0.6063276642340333	0.0	1.0	7.5884432298449855	-12.975941093061998	4.20243873757746	1.1742696349524469	0.7800480566507654	0.022535944134452812	0.4441742021919113	0.35243797534501675	0.00201770166295223	0.20899882389199673	0.10808873007600865	1.0569608637997367e-13	12.975941093061998	-0.3942215783016815	
LPAEGPEPEADS(ph)QEQVHPK	ddPTM_K562_Methotrexat_30min_R1	1	LPAEGPEPEADSQEQVHPK	19	0	O75459	O75459	PAGE1	P antigen family member 1	1	LPAEGPEPEADS(1)QEQVHPK	105.16	0.00035303	20288000.0	2921.7	1759.7	2988.5	2505.8	2388.4	1845.1	1563.4	2414.8	2603.9	3322.0	True	False	2793.2655663447986	2050.4605152142262	2361.2546902689087	2286.120404505483	2702.516463705891	2201.639461711286	1914.0322473725646	2329.8701152783306	2482.8452573493705	2720.353609161839	1.0268023822114156	0.7537477879009958	0.8679954996719815	0.8403761910973969	0.9934430783572127	0.8093210582243487	0.7035968562786556	0.8564585528262191	0.9126921033307701	1.0	11.409578479162132														
LPDLS(ph)PVENK	ddPTM_K562_Methotrexat_30min_R1	1	LPDLSPVENK	10	0	E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;H7C5N8;Q9Y520-3;A0A2R8Y7F4;A0A2R8YET2	E7EPN9	PRRC2C	Protein PRRC2C	1	LPDLS(1)PVENK	116.71	0.0033599000000000003	5620600.0	1582.1	1205.0	2026.2	1451.9	1250.7	1083.8	772.02	1405.3	1403.1	1797.5	True	False	1512.5527783530506	1404.1057685020987	1600.9283096613242	1324.614181220172	1415.1889721809398	1293.2290112203627	945.165137275532	1355.874802468378	1337.8701872525435	1471.9553318688756	1.0275806239531944	0.9539051478684266	1.0876201709386775	0.899901072091888	0.9614347266802844	0.8785789780579876	0.6421153664191006	0.9211385516345014	0.9089067842526918	1.0	10.523518176526416	-7.817499160466353	1.5822490501508826	0.8553801491731149	1.0103529877906354	0.27209603547261285	0.09642792208438256	0.4710572369492196	2.446399207659884	0.03649467431678048	0.047121232717160275	1.5223020756361574e-08	7.817499160466353	0.15497283861752054	
LPDS(ph)DDDEDEETAIQR	ddPTM_K562_Methotrexat_30min_R1	2	LPDSDDDEDEETAIQR	16	0	H3BRF9;Q96K21-2;Q96K21;H3BRM1;Q96K21-4;Q96K21-3	H3BRF9;Q96K21-3	ZFYVE19	Abscission/NoCut checkpoint regulator	1	LPDS(1)DDDEDEETAIQR;LPDS(1)DDDEDEETAIQR	261.64	3.310099999999999e-94	105198000.0	597.49	393.06	852.89	624.79	729.53	572.4100000000001	443.98	683.0799999999999	547.0699999999999	686.05	True	False	571.2250550143251	458.0064841223527	673.8800444314711	570.0156307490539	825.4759821501245	683.0201313089573	543.5538168021434	659.0556892265703	521.6368351081528	561.7996970395782	1.0167770791341009	0.8152487203817175	1.1995023279337884	1.014624311392067	1.4693421632300572	1.2157716262720577	0.9675224455734276	1.1731150669882624	0.9285103531684604	1.0	9.133912036240432	-6.767077660590247	24.999854467096903	1.1337693116325585	0.9160128870735174	0.2105360359405103	0.157279488089591	178.57361000178997	791799.7692708683	0.041428460200966986	0.09023010865262265	1.709709557289498e-07	6.767077660590247	-0.2177564245590411	
LPEASQS(ph)PLVLK	ddPTM_K562_Methotrexat_30min_R1	2	LPEASQSPLVLK	12	0	H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9	H0Y4T7	MTA1	Metastasis-associated protein MTA1	1	LPEAS(0.017)QS(0.983)PLVLK;LPEAS(0.103)QS(0.897)PLVLK	132.23	0.00011613	31993000.0	3958.2999999999997	2950.5	5709.4	4888.4	3215.0	2648.5	2946.5	3995.8999999999996	4201.4	5344.2	True	False	3784.2978715345957	3438.0199750750544	4511.074963567449	4459.841561730622	3637.828852292091	3160.285141370302	3607.327630090356	3855.361932102317	4006.0778310333126	4376.313593643193	0.8647227376556085	0.7855972616013954	1.0307933531363027	1.019086376307392	0.8312541536274305	0.7221340687195655	0.8242845383224305	0.8809610759389859	0.9154000839547547	1.0	12.09550040574136	-10.084806802848336	2.375538352700418	0.9995679641027463	0.869532251670778	0.16504441834063965	0.08987133748359857	0.8263074278033271	10.32242067566078	0.09628961138140439	0.026284416949755005	8.2260850832968e-11	10.084806802848336	-0.13003571243196832	
LPEGPVDS(ph)EDDEEEDEEIDRTDPLQGR	ddPTM_K562_Methotrexat_30min_R1	1	LPEGPVDSEDDEEEDEEIDRTDPLQGR	27	1	E9PCH4;Q8TEU7;Q8TEU7-4;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;D6RD23;D6RIH0;D6RB02;Q8TEU7-6	E9PCH4	RAPGEF6	Rap guanine nucleotide exchange factor 6	1	LPEGPVDS(1)EDDEEEDEEIDRTDPLQGR	121.62	1.7574e-14	17876000.0	243.45	149.24	242.9	240.25	176.92	299.45	296.63	306.75	244.19	383.98	True	False	232.7482294987992	173.8993733537371	191.91860942490152	219.1876555121885	200.1880810412184	357.3144744509484	363.15682841123447	295.96142863244495	232.8376601989871	314.4375011577249	0.7402050602801681	0.5530490883353875	0.6103553447609713	0.6970786076888515	0.6366545984628027	1.1363608765982274	1.1549412111282218	0.9412408747135661	0.740489475147538	1.0	8.29662947959735	-8.248188332662467	24.756924265323786	1.0009549593864515	0.6429172571491768	0.6902893226745632	0.11620226089523707	416.35623111342716	777878.6695575073	0.041135711800387886	0.04089345782836757	5.646920418856296e-09	8.248188332662467	-0.3580377022372747	
LPFPIIDDRNR	ddPTM_K562_Methotrexat_30min_R1	1	LPFPIIDDRNR	11	1	P30041	P30041	PRDX6	Peroxiredoxin-6	0		150.81	9.3393e-08	7787400.0	2319.6	2077.5	2549.8	2446.9	1970.9	1997.4	2322.4	2386.7	2311.6	2858.7	False	True	2217.6331614106166	2420.7715635378495	2014.6318250786903	2232.384076057332	2230.107895795484	2383.3692812433605	2843.257318215456	2302.758408205562	2204.1342205494834	2340.961728630628	0.9473171364949423	1.0340927550976697	0.8606000689542123	0.9536183564022597	0.9526460294162994	1.018115440373961	1.2145680484399255	0.98368050192456	0.9415507283149036	1.0	11.192885633308453	-8.318879741850687	4.700546548126863	1.0435169992669189	0.9493947360335347	0.21375620623497604	0.07777460096414153	0.3338070177963902	15.59308412330573	0.028987757157555735	0.025775412458954042	4.798663074396657e-09	8.318879741850687	-0.09412226323338413	
LPGPPPAS(ph)PIPTEGPR	ddPTM_K562_Methotrexat_30min_R1	1	LPGPPPASPIPTEGPR	16	0	Q9H6A9-3;Q9H6A9	Q9H6A9-3	PCNXL3	Pecanex-like protein 3	1	LPGPPPAS(0.997)PIPT(0.003)EGPR	174.18	3.2439e-07	25435000.0	186.61	160.95	260.49	422.01	137.44	255.32	0.0	354.51	321.68	197.1	True	False	178.40684784050492	187.54425181776983	205.8167088064742	385.0130385127936	155.51576903857702	304.65697651299445	0.0	342.04168236181926	306.72516701261367	161.40328006195006	1.1053483409508686	1.1619605979865235	1.2751705462706664	2.38541024919083	0.9635229778408885	1.887551333504874	0.0	2.119174295779716	1.9003651406271667	1.0	7.334526087355878	-7.009068313434537	24.755695109061083	1.47688079120112	1.1548820483176487	0.040804175020648925	0.6527318063027273	1437.4985599574604	3924285.065148801	0.1718308691104449	0.33003578499249814	9.793359262035023e-08	7.009068313434537	-0.3219987428834712	
LPGSGAVQAAS(ph)PER	ddPTM_K562_Methotrexat_30min_R1	2	LPGSGAVQAASPER	14	0	Q86U90	Q86U90	YRDC	YrdC domain-containing protein, mitochondrial	1	LPGSGAVQAAS(1)PER;LPGSGAVQAAS(1)PER	147.75	1.3272999999999999e-08	210471000.0	888.1800000000001	1092.4499999999998	1131.8	1048.1399999999999	971.97	820.4100000000001	916.3299999999999	1088.56	1148.8600000000001	883.49	True	False	849.136670676703	1272.9587940249926	894.2506469621392	956.2511935423313	1099.801091621258	978.9426214202784	1121.840328281247	1050.2747277983178	1095.449749359958	723.4813998068606	1.1736814117175467	1.7594906992285075	1.2360381997392977	1.3217356987997348	1.52015116340912	1.3530999161576445	1.5506139184514371	1.4516955488816954	1.5141367140224995	1.0	9.498812116343272	-11.689684378173656	6.165218507042905	0.9999999963577949	1.4363163222330717	0.3912569507426632	0.161235400924697	7.417845918841906e-09	2.10971298095362e-09	0.14547905795107005	0.03528385346120418	2.04322230909599e-12	11.689684378173656	0.4363163258752768	
LPGSGAVQAAS(ph)PERAGWTEALR	ddPTM_K562_Methotrexat_30min_R1	1	LPGSGAVQAASPERAGWTEALR	22	1	Q86U90	Q86U90	YRDC	YrdC domain-containing protein, mitochondrial	1	LPGS(0.002)GAVQAAS(0.934)PERAGWT(0.065)EALR	50.869	0.032781	16868000.0	331.86	368.76	354.72	601.36	363.56	518.36	435.93	400.1	443.06	463.72	True	False	317.2718317579442	429.6913221517294	280.26911953561597	548.6397024716321	411.3745124539078	618.5257337665504	533.6983993841127	386.0282562211613	422.46223730604555	379.7358144613269	0.8355067383043898	1.1315533215145028	0.7380634347939787	1.444793147177606	1.0833176560853546	1.6288317040728912	1.405446573800759	1.0165705775441816	1.1125161789264677	1.0	8.568852261708015	-7.261494215256029	24.99999999773013	1.2586914166743142	0.9246923830127604	0.34371796941464994	0.2136393297870531	5.795749567705565	2642671.6065138127	0.05999199522970091	0.09578769902542315	5.476533955827368e-08	7.261494215256029	-0.3339990336615538	
LPISSS(ph)TSNLHVDR	ddPTM_K562_Methotrexat_30min_R1	1	LPISSSTSNLHVDR	14	0	Q86TV6;G3V3H1;Q86TV6-2	Q86TV6	TTC7B	Tetratricopeptide repeat protein 7B	1	LPIS(0.001)S(0.021)S(0.92)T(0.047)S(0.011)NLHVDR	124.68	2.263e-05	0.0	1244.8	1186.0	1054.5	970.19	1262.3	1059.9	1260.0	1326.2	1261.7	1332.1	True	False	1190.0800824814341	1381.9663414468782	833.174860595137	885.1349490171491	1428.3145755049175	1264.7106744717323	1542.58707412654	1279.5567943026836	1203.0438423893777	1090.8437816870814	1.0909720552661313	1.2668783235941918	0.7637893478262875	0.8114222805104262	1.3093667484595357	1.1593875270717051	1.4141228102715127	1.1729972850225554	1.1028562133147695	1.0	10.09122879464402	-7.774143532030325	24.999685946251276	1.2111349684347037	0.9878466636512341	0.2694164196136377	0.1676630515225948	309.44998526962166	608944.698412159	0.05455794992017043	0.06226542742589299	1.68211803807531e-08	7.774143532030325	-0.22328830478346962	
LPLLPPES(ph)PGPLR	ddPTM_K562_Methotrexat_30min_R1	3	LPLLPPESPGPLR	13	0	A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160-2;Q14160;Q14160-3;A0A669KAX5	A0A0G2JMS7	SCRIB	Protein scribble homolog	1	LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR	211.77	1.3943e-17	140426000.0	7930.9	6048.900000000001	6779.0	7177.5	6887.900000000001	5451.2	6445.0	9291.400000000001	8416.2	9614.5	True	False	7582.267132191527	7048.377911279952	5356.18054051629	6548.259718787653	7793.779580622926	6504.567250382403	7890.455311702815	8964.616195584344	8024.9326989914225	7873.220883590149	0.963045143061457	0.8952343666580744	0.6803036037868531	0.8317129438646816	0.9899099359535563	0.826163440167114	1.002188993344336	1.138621198126036	1.0192693457537156	1.0	12.942738238333215	-8.89551194698937	4.490888158903492	1.0613630691224336	0.8620442142015878	0.5013803218403594	0.08650246661422133	0.18017960043671025	6.293142611029035	0.039687972776132556	0.026171552397553147	1.272002758131876e-09	8.89551194698937	-0.19931885492084578	
LPLPS(ph)PALEYTLGSR	ddPTM_K562_Methotrexat_30min_R1	1	LPLPSPALEYTLGSR	15	0	Q8IU81	Q8IU81	IRF2BP1	Interferon regulatory factor 2-binding protein 1	1	LPLPS(0.566)PALEY(0.023)T(0.058)LGS(0.353)R	81.128	0.028107	11211000.0	954.3	798.68	710.26	1083.9	590.63	649.3	675.34	1031.9	1092.4	764.32	True	False	912.3501146465554	930.6482947612075	561.1861322771948	988.8761698633134	668.3081975207709	774.7680356019396	826.8021862227124	995.607492113512	1041.6145624365188	625.8942415877709	1.4576745622904312	1.4869098210591223	0.8966149470453277	1.5799413130159634	1.0677653717110485	1.2378577467600678	1.3209934383247839	1.5906960408963837	1.6642021818161274	1.0	9.289775092896296	-9.08322905807181	7.135268080668074	1.469626335071671	1.2820662856029337	0.03960266702072468	0.2512136016679881	0.639388993082899	47.411452593285105	0.11419298887483087	0.06579867587494073	8.256023908046344e-10	9.08322905807181	-0.18756004946873728	
LPLS(ph)PPLVEDSAFEPSRK	ddPTM_K562_Methotrexat_30min_R1	1	LPLSPPLVEDSAFEPSRK	18	1	O96007	O96007	MOCS2	Molybdopterin synthase catalytic subunit	1	LPLS(1)PPLVEDSAFEPSRK	120.74	9.855e-05	13220000.0	3014.5	2248.4	4282.4	2906.6	2423.0	1869.4	2047.7	2801.0	2774.4	3671.9	True	False	2881.9861894603814	2619.909883734537	3383.5827624586163	2651.782890787627	2741.6669701722353	2230.635092798808	2506.948850546757	2702.4872423780853	2645.4187495641495	3006.8833285615156	0.9584629247451099	0.8713041370274563	1.1252790323851085	0.8819041515841695	0.9117969241207111	0.7418429147584976	0.8337366557371796	0.8987669114753939	0.879787627420087	1.0	11.554053174997938	-7.490746192432882	24.945508574567274	0.8666290863321345	0.978635484548812	0.245142467555578	0.08433190514288183	855.2239688329506	663937.2924764614	0.02356040196731014	0.034910161559043966	3.230381448764341e-08	7.490746192432882	0.11200639821667746	
LPLVPES(ph)PR	ddPTM_K562_Methotrexat_30min_R1	5	LPLVPESPR	9	0	C9J0I9;Q86WB0;Q86WB0-2;Q86WB0-3	C9J0I9	ZC3HC1	Nuclear-interacting partner of ALK	1	LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR	145.28	3.9787e-07	210254200.0	4905.88	4687.25	6399.4400000000005	5383.39	4857.16	4675.35	4554.41	5893.54	4839.599999999999	6134.5	True	False	4690.22338933485	5461.738392872582	5056.284997521994	4911.436556952178	5495.961675956163	5578.79521831438	5575.852377994172	5686.260857709725	4614.608052332275	5023.48260547962	0.933659725270821	1.0872414262796315	1.0065298110132985	0.9776955436443191	1.0940540870911273	1.1105433533758082	1.1099575366125536	1.1319360101908476	0.9186073516605106	1.0	12.294472165900503	-7.766001848559502	24.999810188856905	1.07238659838728	1.0077964810624112	0.13469796637702158	0.06963220388801947	211.11704495719084	1156802.976155212	0.021033735841542316	0.02465177409988215	1.7139500121237135e-08	7.766001848559502	-0.06459011732486886	
LPLVPES(ph)PRR	ddPTM_K562_Methotrexat_30min_R1	5	LPLVPESPRR	10	1	C9J0I9;Q86WB0;Q86WB0-2;Q86WB0-3	C9J0I9	ZC3HC1	Nuclear-interacting partner of ALK	1	LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR	120.03	0.0023281999999999995	882462000.0	12565.5	11770.9	15206.8	14043.8	12447.3	11922.9	11316.0	14156.900000000001	14610.7	14517.5	True	False	12013.135665504877	13715.841153909827	12015.10049321776	12812.601858406122	14084.338125392034	14226.83168285595	13853.901056203104	13658.993802792696	13931.451746055698	11888.240072548766	1.0105058101278177	1.153731845101378	1.0106710850298126	1.0777543000659793	1.1847286090658866	1.1967147025998612	1.165344994015831	1.148950031244136	1.1718683052359389	1.0	13.537247534789808	-7.677474299346406	6.317519302586364	1.1555129615220898	1.0644821817306906	0.27182170091476354	0.06402173128731202	0.2499690922637554	15.102780518560131	0.01787896914944918	0.023067588176028414	2.101482126754184e-08	7.677474299346406	-0.09103077979139917	
LPMIPS(ph)S(ph)S(ph)AS(ph)KK	ddPTM_K562_Methotrexat_30min_R1	1	LPMIPSSSASKK	12	1	Q9BZ95-4;Q9BZ95-5;Q9BZ95	Q9BZ95-4	WHSC1L1	Histone-lysine N-methyltransferase NSD3	4	LPMIPS(1)S(1)S(1)AS(1)KK	50.148999999999994	0.028783999999999997	6080200.0	1695.0	1718.6	1624.1	1609.6	1786.7	1635.2	1532.8	1980.8	1729.3	1583.0	True	False	1620.489829535693	2002.5694387947767	1283.2236046396977	1468.4888670652178	2021.6823671509424	1951.179257379165	1876.569418429492	1911.1341412718718	1648.9052204517325	1296.3033604163718	1.2500853419181084	1.5448308628557075	0.9899099576718887	1.1328280955728913	1.5595750415254492	1.5051872246573883	1.4476313768304505	1.474295446289684	1.2720056668850301	1.0	10.340187661336936	-5.978188873160468	17.77346416059093	1.343621641373491	1.021777683852403	0.004579248590575347	0.20829514699757765	85071523.37184858	1638101469.2986455	0.05301198372142749	776143168.5323308	1.051504478728147e-06	5.978188873160468	-0.32184395752108785	
LPPPS(ph)WVFPLPASAS(ph)S(ph)LS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LPPPSWVFPLPASASSLSR	19	0	Q9BUJ8	Q9BUJ8	ALDH3B1		4	LPPPS(1)WVFPLPAS(0.385)AS(0.837)S(0.851)LS(0.927)R	43.163999999999994	0.032763	0.0	570.58	562.05	580.35	545.8	454.66	698.21	561.45	740.76	693.83	695.3	True	False	545.4979863932016	654.9192092834892	458.54246595200345	497.95056140916716	514.45575924825	833.1292008896198	687.3694545780518	714.7070509332351	661.5739947412388	569.3744324052458	0.9580654756287855	1.1502434461569884	0.8053443215125632	0.8745572914218187	0.9035455931433395	1.463236059564841	1.2072362499214302	1.255249639352528	1.1619313356704628	1.0	9.153233900504482	-8.233685092220053	24.990112282497382	1.2328403807388912	0.9391896008733498	0.5158918197258118	0.13481287136403036	577.3278755510553	519829.83849791787	0.04431415651192531	0.04430531309634191	5.838683148791507e-09	8.233685092220053	-0.29365077986554144	
LPPRS(ph)EDIY(ph)ADPAAYVMRR	ddPTM_K562_Methotrexat_30min_R1	1	LPPRSEDIYADPAAYVMRR	19	2	A0A1B0GUN5;Q5VTI5;Q9Y2H5	A0A1B0GUN5	PLEKHA6	Pleckstrin homology domain-containing family A member 6	2	LPPRS(1)EDIY(1)ADPAAYVMRR	45.88	0.033516000000000004	18996000.0	177.62	0.0	281.95	0.0	0.0	217.57	120.06	156.73	150.45	234.3	True	False	169.81203747618278	0.0	222.7725480747263	0.0	0.0	259.6123232803234	146.9865112060574	151.2177170645903	143.45561233849705	191.8659995865799	0.8850553920031817	0.0	1.1610840302854168	0.0	0.0	1.353091865362903	0.7660894140846953	0.7881423357469493	0.747686472056569	1.0	7.583955265175528	-8.258656510996948	24.994962406504385	0.907453866843962	0.4055279222500762	0.30273512078819276	0.39510420745357666	336.38168039926285	3021295.28545358	0.13152294646217755	0.1259972404772696	5.5124350950696434e-09	8.258656510996948	-0.5019259445938857	
LPPYPT(ph)HEMDGHFMGAT(ph)SR	ddPTM_K562_Methotrexat_30min_R1	1	LPPYPTHEMDGHFMGATSR	19	0	E7EQS8;Q6N021	E7EQS8	TET2	Methylcytosine dioxygenase TET2	2	LPPY(0.02)PT(0.98)HEMDGHFMGAT(0.579)S(0.421)R	45.099	0.028317000000000002	38276000.0	0.0	0.0	0.0	0.0	0.0	75.369	0.0	0.0	138.3	0.0	True	False	0.0	0.0	0.0	0.0	0.0	89.93299256935558	0.0	0.0	131.87046318653475	0.0											0.0														
LPSGSGAAS(ph)PTGSAVDIR	ddPTM_K562_Methotrexat_30min_R1	2	LPSGSGAASPTGSAVDIR	18	0	Q09666	Q09666	AHNAK	Neuroblast differentiation-associated protein AHNAK	1	LPSGSGAAS(0.897)PT(0.103)GSAVDIR;LPSGSGAAS(0.751)PT(0.233)GS(0.016)AVDIR	216.53	8.874399999999998e-35	226840000.0	784.94	731.5899999999999	805.74	804.21	672.8199999999999	553.2	529.52	759.23	885.01	761.15	True	False	750.4349774606179	852.4728125962235	636.6261850885969	733.7061579165752	761.3076231412641	660.0980706838021	648.2783392789569	732.5274505643397	843.8660782698128	623.2983593056991	1.2039739336014585	1.3676801805571974	1.0213827384332341	1.1771347492938389	1.2214176594164237	1.0590402827613643	1.0400770828292942	1.1752436688270964	1.3538718106202094	1.0	9.2837791049547	-6.753616968503039	24.99999152712572	1.136336333684819	1.2858270361256867	0.2438773481517812	0.10871117151471282	253.61613901507795	810524.2018802428	0.02770348451585715	0.07051416866046378	1.763530728898317e-07	6.753616968503039	0.14949070244086782	
LPSGSGAASPT(ph)GSAVDIR	ddPTM_K562_Methotrexat_30min_R1	1	LPSGSGAASPTGSAVDIR	18	0	Q09666	Q09666	AHNAK	Neuroblast differentiation-associated protein AHNAK	1	LPSGSGAAS(0.371)PT(0.627)GS(0.002)AVDIR	266.29	1.5764999999999997e-115	119530000.0	618.55	603.67	584.89	578.7	588.18	474.41	536.95	351.48	743.64	553.66	True	False	591.3592826308577	703.4162068644495	462.129581994774	527.9662694897128	665.5359795773444	566.0830182810967	657.3747059144807	339.1182491792397	709.0683387131937	453.3868089249073	1.304315147661921	1.5514703847084212	1.0192832541612713	1.164494112084231	1.4679209153779649	1.2485652584895888	1.4499202292040199	0.7479667306231808	1.5639368520548067	1.0	8.824598606933128	-15.999999964456324	0.12821984797673613	0.10992417087547926	1.385543695023623	0.0994481838684993	0.24285162636566113	339.5989188248165	2.756785678292471	77.94048246420252	1.8653813271509079	1.0000000818423429e-16	15.999999964456324	1.2756195241481438	
LPSS(ph)PLGCR	ddPTM_K562_Methotrexat_30min_R1	1	LPSSPLGCR	9	0	C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3	C9JWC4	HJURP	Holliday junction recognition protein	1	LPS(0.036)S(0.964)PLGCR	83.499	0.025019	25519000.0	1716.2	1492.2	1880.9	1550.0	1432.0	1502.7	1808.9	2029.0	1855.6	1730.0	True	False	1640.7579029198562	1738.7606869367894	1486.1247940193382	1414.1139065302484	1620.3330999944874	1793.0755076221071	2214.5918717361083	1957.6389199518526	1769.3335610190431	1416.6802359572487	1.1581709557846684	1.2273487289542877	1.0490192185219314	0.9981884906968677	1.143753585931571	1.2656882351510528	1.563226348138973	1.381849531224016	1.2489293745412544	1.0	10.468298443723842	-8.317887890272976	3.7565808412739563	1.338504574210249	1.1096617728616203	0.2534278981802859	0.14477963880030437	0.2707603053064349	7.798550410163396	0.05269322894479729	0.04709323328947212	4.809634893926782e-09	8.317887890272976	-0.22884280134862878	
LPSS(ph)PVYEDAASFK	ddPTM_K562_Methotrexat_30min_R1	2	LPSSPVYEDAASFK	14	0	Q14247-3;Q14247;H0YEV2;H0YCD9;Q14247-2	Q14247-3	CTTN	Src substrate cortactin	1	LPS(0.014)S(0.986)PVYEDAASFK;LPS(0.185)S(0.815)PVYEDAASFK	212.43	4.5886e-19	126631000.0	10730.0	7671.6	13407.3	8967.2	8555.2	7411.3	6341.6	9099.599999999999	9787.2	12128.8	True	False	10258.322047739224	8939.201505096014	10593.290951595236	8181.059498476156	9680.358754939134	8843.428834524335	7763.8652295879865	8779.561910297623	9332.195208237546	9932.156789525014	1.0328393182997475	0.9000262173190597	1.0665650146368502	0.8236941554430898	0.9746482018033144	0.8903835311833871	0.7816897572313977	0.8839532134205756	0.9395940283665055	1.0	13.277891320812845	-7.2643777093427335	24.99704217676977	0.8921901418622367	0.9898317848734042	0.27866487508501014	0.07310626263326139	338.4531749870458	2879304.765358367	0.01992809230466222	0.031079051268713832	5.4402930045154405e-08	7.2643777093427335	0.09764164301116751	
LPWNS(ph)Y(ph)KN	ddPTM_K562_Methotrexat_30min_R1	1	LPWNSYKN	8	1	H3BSS8	H3BSS8	NAE1		2	LPWNS(1)Y(1)KN	50.473	0.033914	0.0	755.23	568.14	680.19	654.07	602.74	599.37	685.3	643.95	551.52	660.28	True	False	722.0309934868689	662.0154782711887	537.4274143463309	596.7286986091867	682.0108747839924	715.1897697500917	838.9959697610457	621.3019135056653	525.8799555794475	540.6968937559839	1.3353710772614886	1.2243744802609424	0.9939532121463814	1.1036288639721499	1.2613552669895371	1.3227184731578214	1.551693711300816	1.1490761657418702	0.9725965909039913	1.0	9.078676258094562	-9.607498370799405	4.89030871758844	0.994248299823684	1.2485148343241088	0.370381695897787	0.1389740681150268	0.26272337968272585	10.831226466690707	0.1133403697032146	0.04012382114811059	2.468889366613755e-10	9.607498370799405	0.2542665345004248	
LQAALDDEEAGGRPAMEPGNGS(ph)LDLGGDSAGR	ddPTM_K562_Methotrexat_30min_R1	12	LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR	32	1	A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1	A0A1W2PPS1	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	1	LQAALDDEEAGGRPAMEPGNGS(0.999)LDLGGDS(0.001)AGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(0.998)LDLGGDS(0.002)AGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(0.997)LDLGGDS(0.003)AGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(0.972)LDLGGDS(0.028)AGR;LQAALDDEEAGGRPAMEPGNGS(0.984)LDLGGDS(0.016)AGR;LQAALDDEEAGGRPAMEPGNGS(0.997)LDLGGDS(0.003)AGR;LQAALDDEEAGGRPAMEPGNGS(0.994)LDLGGDS(0.006)AGR;LQAALDDEEAGGRPAMEPGNGS(0.993)LDLGGDS(0.007)AGR;LQAALDDEEAGGRPAMEPGNGS(0.992)LDLGGDS(0.008)AGR	111.03	6.4245e-15	2892700000.0	19256.35	16999.5	21897.93	22732.86	17169.06	17078.75	17813.410000000003	19964.83	18997.050000000003	21661.7	True	False	18409.863910902448	19808.378432905745	17301.85374591944	20739.905458842077	19427.092328066585	20378.97672576102	21808.52064453685	19262.655612726634	18113.88129195776	17738.556223835327	1.0378445505144935	1.1166849310029638	0.9753811712517455	1.1691991838080842	1.0951901655875673	1.1488520524786427	1.2294416957808947	1.0859201487234553	1.021158715703035	1.0	14.114600970164894	-6.251953536518267	23.332783498883785	1.1009208922796638	1.0378444815151688	0.03926628018416012	0.07502702207366055	1718.142038047989	4225963.711675127	0.018872596450820477	0.22501463646821399	5.598174909928784e-07	6.251953536518267	-0.063076410764495	
LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR	ddPTM_K562_Methotrexat_30min_R1	1	LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR	32	1	A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1	A0A1W2PPS1	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	0		73.87	3.3221e-05	33606000.0	339.43	264.33	450.93	256.44	346.39	315.8	286.23	282.43	323.45	428.6	False	True	324.50906362200635	308.00603965822353	356.28595532305826	233.95830334878497	391.9463564993649	376.82388055304534	350.42436367241214	272.49677681715195	308.4128800989491	350.9763867810846	0.924589447735164	0.8775691221937871	1.0151279936256379	0.6665927172323202	1.1167314134549873	1.073644537767957	0.9984271787805007	0.7763963248818704	0.8787282897504903	1.0	8.45523016098894	-5.948909730802934	16.85184702503128	0.9311392656765786	0.8770346629340224	9.35132014512341e-05	0.1306226216944859	106160287.05183834	812713412.5222046	0.033239509978060244	191346959.19976738	1.1248387502253844e-06	5.948909730802934	-0.05410460274255613	
LQAITASSANLRHS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	LQAITASSANLRHSPR	16	1	I3VM54;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2;Q9Y2K7	I3VM54	KDM2A	Lysine-specific demethylase 2A	1	LQAITASSANLRHS(1)PR	106.6	0.00081573	41695000.0	2386.8	2650.9	2744.6	2854.9	1918.7	2042.7	2266.3	3008.7	2916.0	3076.3	True	False	2281.879129873625	3088.916167404326	2168.5459671781996	2604.6153495181966	2171.042680837585	2437.4228651225662	2774.575465153155	2902.882315652606	2780.4357964709693	2519.152260043518	0.905812310778788	1.2261728742632514	0.8608236991362874	1.033925337039057	0.8618147919332517	0.9675567863771999	1.1013925236520736	1.1523250744686862	1.1037188345348121	1.0	11.298722607278583	-8.765099184205265	24.694134556425503	1.1020528988655562	0.9795933610359397	0.21449562972582115	0.10500726949061961	120.4731838369834	812864.526477872	0.04181743841113801	0.029446463307413084	1.717516095913029e-09	8.765099184205265	-0.1224595378296165	
LQALVNSLCAGQS(ph)P	ddPTM_K562_Methotrexat_30min_R1	1	LQALVNSLCAGQSP	14	0	Q6XQN6-3;Q6XQN6;Q6XQN6-2	Q6XQN6-3	NAPRT	Nicotinate phosphoribosyltransferase	1	LQALVNSLCAGQS(1)P	147.39	1.4428e-08	8881700.0	3491.3	2896.7	3981.5	3611.7	3472.7	3155.7	3332.6	3997.3	3743.1	4779.2	True	False	3337.826632364582	3375.3304395186956	3145.837560416821	3295.0678685259977	3929.420919239426	3765.49436308184	4080.0203835191296	3856.7126933087916	3569.0840980008534	3913.6405686051326	0.8528700001579917	0.8624528441868904	0.8038136117180619	0.8419444276407833	1.004032141009801	0.96214619024759	1.042512799016006	0.9854539847749405	0.9119601137191086	1.0	11.934295548623183	-7.75633718947859	24.990549932401645	0.985421439218573	0.8392506166830758	0.8092183216652397	0.034268779988947166	53.113345967426795	260147.76507141307	0.010434945716368134	0.013059805042204739	1.7525193044143534e-08	7.75633718947859	-0.14617082253549718	
LQAMHLERCLR	ddPTM_K562_Methotrexat_30min_R1	1	LQAMHLERCLR	11	1	Q08J23-3;Q08J23-2;Q08J23	Q08J23-3	NSUN2	tRNA (cytosine(34)-C(5))-methyltransferase	0		84.615	0.0058666000000000005	0.0	952.25	1005.7	1427.5	1089.0	932.88	831.28	854.06	987.4	849.21	1078.1	False	True	910.3902301919549	1171.8748310228711	1127.8872579417332	993.5290607815743	1055.570071454509	991.9130950795941	1045.6046956575499	952.6725823363525	809.7304124558	882.8456429974044	1.0311997770086196	1.3273836035982074	1.2775588426900684	1.1253712001209881	1.1956451049253378	1.1235407944155311	1.1843573154051619	1.0790930327320576	0.9171823170657938	1.0	9.786017408454086	-9.499232491084989	2.815304382840622	0.9594045388565487	1.186667142922276	0.5473425437013643	0.08030175684707598	0.20398046903459421	3.118938062849125	0.06158264667655038	0.02181898879132538	3.167871150972269e-10	9.499232491084989	0.22726260406572718	
LQAVTDDHIR	ddPTM_K562_Methotrexat_30min_R1	4	LQAVTDDHIR	10	0	A0A2R8YEP4;P30043	A0A2R8YEP4	BLVRB	Flavin reductase (NADPH)	0	;;;	163.84	4.2726e-09	66607300.0	17377.7	14988.5	17632.9	17939.5	16236.2	14962.5	14929.8	18614.800000000003	18687.4	21431.1	False	True	16613.797115470457	17465.094864061157	13931.995257835919	16366.771887870565	18371.54488696264	17853.791364075183	18278.187697852714	17960.10693303093	17818.626852870933	17549.72011839502	0.946670203478427	0.995177971285983	0.7938585438312987	0.9325944674590834	1.0468283689439704	1.0173262732185366	1.0415087861540389	1.0233842370059085	1.0153225654119722	1.0	14.099160402271691	-7.68586700326987	5.670727635747308	1.0256269109575757	0.9118149475037836	0.5373515658076663	0.04876183990386306	0.1612517122366188	8.917445120582466	0.014882648162182996	0.019171243691482712	2.06126104955951e-08	7.68586700326987	-0.11381196345379219	
LQDSS(ph)DPDT(ph)GSEEEGSSRLS(ph)PPHSPR	ddPTM_K562_Methotrexat_30min_R1	1	LQDSSDPDTGSEEEGSSRLSPPHSPR	26	1	V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF0	V9GYM8;V9GYF0	ARHGEF2	Rho guanine nucleotide exchange factor 2	3	LQDS(0.322)S(0.615)DPDT(0.374)GS(0.313)EEEGS(0.34)S(0.327)RLS(0.657)PPHS(0.051)PR	48.961000000000006	0.026979000000000003	13246000.0	1414.3	1256.3	1641.6	1559.2	1319.7	1327.6	1422.1	1615.9	1478.9	1667.3	True	False	1352.1290654350043	1463.8822215511918	1297.0505937913476	1422.5073568141695	1493.263681608049	1584.1399107733473	1741.042125488374	1559.0678810991615	1410.146261797297	1365.3358135326707	0.9903271063669712	1.0721774138213969	0.9499865021744051	1.0418736128612733	1.0936969987950274	1.1602566160441823	1.2751750215821267	1.1418933464179983	1.0328200929181546	1.0	10.415040120007385	-7.82276997326818	2.67806961299486	1.139337602619333	1.00988482478384	0.3041522868309938	0.07620890993568957	0.3057717402370643	4.472620861976793	0.02567928526591912	0.03112048797231382	1.503938325316774e-08	7.82276997326818	-0.12945277783549303	
LQDSSDPDT(ph)GSEEEGSSRLSPPHSPR	ddPTM_K562_Methotrexat_30min_R1	1	LQDSSDPDTGSEEEGSSRLSPPHSPR	26	1	V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF0	V9GYM8;V9GYF0	ARHGEF2	Rho guanine nucleotide exchange factor 2	1	LQDS(0.043)S(0.11)DPDT(0.448)GS(0.269)EEEGS(0.061)S(0.061)RLS(0.008)PPHSPR	61.038999999999994	0.021376	44897000.0	1144.2	1374.4	1417.1	1535.5	1258.2	1412.8	1255.9	1723.3	1468.8	1633.6	True	False	1093.9023380263955	1601.4962391944262	1119.6700758173238	1400.885099017546	1423.6753536404076	1685.8036049567536	1537.5675447583492	1662.690562224262	1400.515808592785	1337.7392100923464	0.8177246579704287	1.197166254163898	0.836986811308335	1.0472034372983958	1.0642398330704002	1.2601885272095597	1.1493776463741452	1.2429108376882245	1.0469273816800997	1.0	10.385581177190193	-7.823336590252736	2.5655294686528385	1.155058011380006	0.9747211949011435	0.28100186126452653	0.12355651197318707	0.33712366585323267	4.531220851152852	0.03860388831516227	0.046911150434448344	1.5019774407596644e-08	7.823336590252736	-0.18033681647886246	
LQDSSDPDTGSEEEGS(ph)SRLSPPHSPR	ddPTM_K562_Methotrexat_30min_R1	1	LQDSSDPDTGSEEEGSSRLSPPHSPR	26	1	V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF0	V9GYM8;V9GYF0	ARHGEF2	Rho guanine nucleotide exchange factor 2	1	LQDS(0.005)S(0.012)DPDT(0.216)GS(0.065)EEEGS(0.268)S(0.268)RLS(0.158)PPHS(0.007)PR	58.998000000000005	0.0037573999999999997	54842000.0	889.93	780.89	1259.0	913.76	676.7	730.41	555.73	893.36	979.97	1036.1	True	False	850.8097427720943	909.9187996395048	994.753105252989	833.6520795039219	765.6979111496292	871.5513951702028	680.3665989716998	861.9400224387313	934.4114085965907	848.4522499857252	1.002778580393191	1.0724455025663657	1.172432632796631	0.9825562717500574	0.9024643533711081	1.0272250385155632	0.8018914428986977	1.0158969140022116	1.1013129007699747	1.0	9.728689658443956	-7.437740925213908	9.61065707938251	0.9671301055736989	1.0812539764882283	0.2489880570317088	0.0843276598555584	0.6164611559359934	66.21120154811496	0.024181684578272643	0.03586889939900577	3.6497160279388475e-08	7.437740925213908	0.11412387091452936	
LQDSSDPDTGSEEEGSS(ph)RLSPPHS(ph)PRDFTR	ddPTM_K562_Methotrexat_30min_R1	1	LQDSSDPDTGSEEEGSSRLSPPHSPRDFTR	30	2	V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974	V9GYM8	ARHGEF2	Rho guanine nucleotide exchange factor 2	2	LQDS(0.001)S(0.002)DPDT(0.063)GS(0.056)EEEGS(0.319)S(0.362)RLS(0.32)PPHS(0.806)PRDFT(0.071)R	43.992	0.032757999999999995	23683000.0	553.38	432.88	729.38	679.49	444.03	572.59	570.04	674.48	585.03	746.09	True	False	529.0540777985027	504.40606229808145	576.2931055674547	619.9201666762826	502.4277279263635	683.2349137614575	697.8859807421367	650.7581561010968	557.8320829936255	610.9658712400831	0.8659306561996283	0.8255879518675631	0.9432492594025708	1.0146559666549377	0.8223499078706006	1.118286545817509	1.1422667183121555	1.0651301271219078	0.9130331320494033	1.0	9.254947982637278	-8.265205716509083	24.97198415799138	1.057721651970035	0.8999341331214433	0.4805401467724152	0.07929541742812099	299.5128410369404	1985856.451824917	0.02885309802084089	0.026409169492038028	5.429930657374836e-09	8.265205716509083	-0.15778751884859166	
LQDSSDPDTGSEEEGSSRLS(ph)PPHS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	LQDSSDPDTGSEEEGSSRLSPPHSPR	26	1	V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF0	V9GYM8;V9GYF0	ARHGEF2	Rho guanine nucleotide exchange factor 2	2	LQDS(0.008)S(0.003)DPDT(0.038)GS(0.113)EEEGS(0.147)S(0.15)RLS(0.741)PPHS(0.8)PR	56.957	0.016354	26216000.0	2852.9	2604.4	3836.5	3200.7	3088.3	2672.5	2764.8	3115.4	3187.1	3316.3	True	False	2727.4899319660067	3034.7328327691826	3031.271078874575	2920.099600407332	3494.4655815034725	3188.9228017036553	3384.8767797976643	3005.8296161744684	3038.932416643563	2715.685934395967	1.0043465989275617	1.117482988121813	1.1162082627013354	1.0752714676694866	1.2867708806985905	1.1742605289197212	1.2464168764605474	1.1068399250825138	1.1190294054822263	1.0	11.407100928055957	-5.62434827899564	0.9244931285777326	1.157887749893201	0.6741830782593538	0.20331943148789167	0.0780637471956989	8.707212820137302	2.5509563610792467	0.025831772497238614	5.599251083963856	2.374934962597546e-06	5.62434827899564	-0.4837046716338472	
LQDSSDPDTGSEEEGSSRLS(ph)PPHS(ph)PRDFTR	ddPTM_K562_Methotrexat_30min_R1	2	LQDSSDPDTGSEEEGSSRLSPPHSPRDFTR	30	2	V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974	V9GYM8	ARHGEF2	Rho guanine nucleotide exchange factor 2	2	LQDSSDPDT(0.01)GS(0.032)EEEGS(0.209)S(0.209)RLS(0.599)PPHS(0.754)PRDFT(0.187)R;LQDS(0.001)S(0.001)DPDT(0.002)GS(0.022)EEEGS(0.017)S(0.247)RLS(0.761)PPHS(0.898)PRDFT(0.051)R	66.98	0.00016592	58995000.0	1068.96	1193.4	1590.8899999999999	1285.33	841.29	1195.4099999999999	1082.4499999999998	1273.57	1245.5700000000002	1620.25	True	False	1021.9697983365639	1390.5890656683853	1256.9839297981953	1172.647114503564	951.9343810714821	1426.406064128931	1325.2169669748193	1228.777821233652	1187.6637225687055	1326.8070244564926	0.7702475035924679	1.0480718296151772	0.9473750942139462	0.8838113552978225	0.7174625725707386	1.075066711161887	0.9988015909982655	0.9261164574682615	0.8951292092044921	1.0	10.373742839918236	-8.30028921203599	24.999310771851793	0.9756412047261561	0.8877865731312852	0.22553017468010328	0.09593423370633651	1071.42226905818	689441.2069419266	0.035152900081368135	0.03100239728412047	5.008535864511213e-09	8.30028921203599	-0.08785463159487095	
LQDSSDPDTGSEEEGSSRLS(ph)PPHS(ph)PRGETLAETWTR	ddPTM_K562_Methotrexat_30min_R1	1	LQDSSDPDTGSEEEGSSRLSPPHSPRGETLAETWTR	36	2	V9GYF0	V9GYF0	ARHGEF2		2	LQDS(0.013)S(0.011)DPDT(0.037)GS(0.037)EEEGS(0.139)S(0.139)RLS(0.637)PPHS(0.91)PRGET(0.063)LAET(0.008)WT(0.006)R	54.375	0.0019767	89080000.0	696.0	528.32	808.63	747.06	538.43	475.76	567.63	764.15	666.23	1050.1	True	False	665.4046733668691	615.6159000954591	638.9096135827833	681.566409685476	609.2429825628714	567.6938866748482	694.935476894006	737.2744113756572	635.2571127170286	859.9167143229515	0.7738013022467765	0.7159017726270843	0.7429901093221843	0.7925958390308784	0.7084906856852455	0.6601731042311666	0.8081427716417372	0.8573788590167645	0.7387426039476312	1.0	9.748053126738524	-11.163139141825285	0.45539324345782295	1.0372588794039084	0.7358589932304825	0.6762265600225938	0.051535184914599894	3.2405984956124283	0.77112470750701	0.26683230761435245	0.030616542174639882	6.868483482377559e-12	11.163139141825285	-0.30139988617342583	
LQEDPNYS(ph)PQRFPNAQR	ddPTM_K562_Methotrexat_30min_R1	4	LQEDPNYSPQRFPNAQR	17	1	P46379-3;P46379;P46379-2;P46379-5;A0A0G2JK23;A0A024RCR6;A0A0G2JL47;H0Y710;P46379-4;H0Y4L1	P46379-3;P46379-4	BAG6;BAT3	Large proline-rich protein BAG6	1	LQEDPNY(0.026)S(0.974)PQRFPNAQR;LQEDPNY(0.054)S(0.946)PQRFPNAQR;LQEDPNY(0.409)S(0.591)PQRFPNAQR;LQEDPNY(0.313)S(0.687)PQRFPNAQR	93.839	0.0055436999999999995	727822000.0	6685.9	6550.2	8963.5	8084.200000000001	6073.18	6058.7	6367.800000000001	6563.0	6729.18	8033.8	True	False	6391.995841470615	7632.50921563688	7082.18384347511	7375.470737530219	6871.909620268518	7229.458027570414	7795.941246526177	6332.175570056184	6416.341890568083	6578.800970886324	0.97160498847094	1.16016721731112	1.0765158992978272	1.1210964992206724	1.0445535061296596	1.0989020734269805	1.1850094388059706	0.9625121048772337	0.9753056702829005	1.0	12.683608952059796	-9.287709982735208	24.979673853474804	0.9766816370002512	1.095184006869966	0.4638151075153307	0.05648614663874928	648.3574695185682	616493.1531469622	0.029372833261839794	0.014117909182254763	5.1557282373177e-10	9.287709982735208	0.11850236986971485	
LQEEQDGGS(ph)S(ph)DEDRAGPAPPGASDGVDIQDVK	ddPTM_K562_Methotrexat_30min_R1	1	LQEEQDGGSSDEDRAGPAPPGASDGVDIQDVK	32	1	H7C504;Q14147	H7C504	DHX34	Probable ATP-dependent RNA helicase DHX34	2	LQEEQDGGS(0.882)S(0.897)DEDRAGPAPPGAS(0.221)DGVDIQDVK	53.091	0.0097574	0.0	696.74	532.64	1173.1	879.81	509.12	593.94	530.14	821.82	766.92	985.44	True	False	666.1121438529201	620.6497066680142	926.8823413600327	802.6784232931469	576.0782038192693	708.7104990996703	649.037390061463	792.9161247879896	731.2660565944848	806.9672668911622	0.825451255810058	0.7691138564505403	1.148599676082083	0.9946852322591249	0.7138805097245245	0.8782394629586083	0.8042920905105317	0.9825877173961409	0.9061904820646368	1.0	9.656366344254788	-9.290580885425992	24.663137063639997	0.9582918301941373	0.8810501728623716	0.10048992657297029	0.1179010014066354	1870.340202549278	1582900.3121819173	0.06866620711844922	0.032995801581418814	5.121758708908048e-10	9.290580885425992	-0.07724165733176569	
LQEET(ph)GAKISVLGKGS(ph)MR	ddPTM_K562_Methotrexat_30min_R1	1	LQEETGAKISVLGKGSMR	18	2	Q07666;Q07666-2	Q07666	KHDRBS1	KH domain-containing, RNA-binding, signal transduction-associated protein 1	2	LQEET(0.943)GAKIS(0.057)VLGKGS(1)MR	57.578	0.033923	6535700.0	1084.6	855.64	864.66	866.53	696.73	987.2	930.26	948.57	944.44	1002.6	True	False	1036.9222826633707	997.0199666067512	683.1796822780378	790.562660274617	788.3622072340497	1177.962428378615	1138.8944853785354	915.208255445406	900.5331905415102	821.0194246073627	1.262969244801071	1.2143683044814164	0.8321114723987875	0.9629037225918119	0.9602235752352258	1.434755857258741	1.3871711816357946	1.1147218056175558	1.0968476062209775	1.0	9.681272545094737	-8.23113062293754	24.9882809535673	1.2251489819468284	1.0392840225472555	0.17899155731869176	0.16888703665954544	1160.223429140827	956556.1848002439	0.05982691562623256	0.0598195301999197	5.873126796756279e-09	8.23113062293754	-0.18586495939957293	
LQELAS(ph)PPAGRPTPAPR	ddPTM_K562_Methotrexat_30min_R1	1	LQELASPPAGRPTPAPR	17	1	Q8N3F8	Q8N3F8	MICALL1	MICAL-like protein 1	1	LQELAS(1)PPAGRPTPAPR	89.353	0.005106899999999999	14661000.0	1870.5	1536.2	1992.1	2160.1	1607.6	1683.6	1985.7	1946.8	2017.7	2383.9	True	False	1788.2750596734609	1790.0309390646676	1573.9854336572512	1970.7273867716067	1819.0275778988403	2008.9318723847612	2431.043772296087	1878.329940543255	1923.8975674003693	1952.152609536697	0.9160529002380972	0.9169523582941062	0.8062819607278573	1.0095150231309622	0.9318060324856206	1.029085463180842	1.2453144085251844	0.9621839662366549	0.9855262124496336	1.0	10.930850124661095	-7.87344456448922	1.5725608797745536	1.0510406429564196	0.8920347376291184	0.3622309366857316	0.08563494664175055	0.41774535016970404	2.136506170222469	0.033814990553434184	0.04168700951382161	1.3383060322995354e-08	7.87344456448922	-0.1590059053273012	
LQELASPPAGR	ddPTM_K562_Methotrexat_30min_R1	1	LQELASPPAGR	11	0	Q8N3F8	Q8N3F8	MICALL1	MICAL-like protein 1	0		94.82	0.017183	8264800.0	1890.9	1789.0	1502.3	1922.4	1791.8	1625.1	2045.0	1878.8	2051.0	2324.6	False	True	1807.778300099731	2084.6018421993804	1186.9877601442138	1753.866176718547	2027.4531065433812	1939.1275753222108	2503.6433068164865	1812.7215390860224	1955.649457668711	1903.5924141654439	0.9496666863385675	1.0950883322958045	0.6235514237771338	0.9213454328076115	1.065066813387276	1.0186674210783435	1.3152202583839943	0.9522634811931312	1.0273467382596655	1.0	10.89450889513061	-7.7317607159587185	4.929412089584715	1.0718932837121207	0.8893426919146341	0.2475469864544294	0.1415674794282947	0.2730571787544538	16.21254807742051	0.044032934031293894	0.05535809453901617	1.8545531485828534e-08	7.7317607159587185	-0.18255059179748656	
LQELESCSGLGS(ph)TSDDTDVR	ddPTM_K562_Methotrexat_30min_R1	2	LQELESCSGLGSTSDDTDVR	20	0	Q14C86-4;Q14C86-2;Q14C86-6;F8W9S7;Q14C86-3;Q14C86-5;Q14C86;H0Y4E7;H0Y7I9;C9IZ08;B4DGD8	Q14C86-4	GAPVD1	GTPase-activating protein and VPS9 domain-containing protein 1	1	LQELESCS(0.031)GLGS(0.933)T(0.028)S(0.007)DDTDVR;LQELESCS(0.007)GLGS(0.891)T(0.099)S(0.003)DDTDVR	132.48	1.0579e-11	10217000.0	1193.51	712.91	1067.18	1029.29	949.1199999999999	743.4399999999999	876.21	1134.0	1152.84	1105.5	True	False	1141.044729468523	830.7062601019347	843.193501877589	939.053743775819	1073.9459161080777	887.0992582595193	1072.72239700033	1094.1165772426807	1099.244720028667	905.2832374859761	1.260428429711424	0.9176202824751887	0.9314140226645378	1.0373038016075782	1.186309291543371	0.9799134917410436	1.1849577597165524	1.208590341605248	1.2142550248487238	1.0	9.822225431015982	-8.77662561050451	24.842946851818034	1.169333352013471	1.0459825143330537	0.1452193697981694	0.11497777428611092	369.655371891683	604707.9071448646	0.04780169008987857	0.03237080960518036	1.6725318219378518e-09	8.77662561050451	-0.12335083768041732	
LQELESCSGLGSTSDDT(ph)DVR	ddPTM_K562_Methotrexat_30min_R1	1	LQELESCSGLGSTSDDTDVR	20	0	Q14C86-4;Q14C86-2;Q14C86-6;F8W9S7;Q14C86-3;Q14C86-5;Q14C86;H0Y4E7;H0Y7I9;C9IZ08;B4DGD8	Q14C86-4	GAPVD1	GTPase-activating protein and VPS9 domain-containing protein 1	1	LQELESCS(0.001)GLGS(0.032)T(0.188)S(0.017)DDT(0.763)DVR	137.39	5.6003e-09	13386000.0	1039.8	1116.8	1354.0	1088.9	1363.1	972.31	991.45	1219.9	1096.2	1164.5	True	False	994.0916370213648	1301.3322176457616	1069.813903504803	993.4378276263142	1542.3715423201706	1160.1951466134633	1213.807900510125	1176.9954255540972	1045.2379012659394	953.5977657642867	1.042464310122018	1.3646552711905462	1.1218712353498141	1.0417786862473368	1.6174236116042022	1.2166504455718743	1.2728720054595406	1.2342682290271123	1.0960993605392995	1.0	9.897237045410622	-9.90773333681746	2.6866782955561965	1.0015538935858694	1.2470126613060606	0.19836348278958993	0.15887207207033865	0.3962285161234671	5.934631619939769	0.15025688803221207	0.040976717265748905	1.2367065563311625e-10	9.90773333681746	0.24545876772019115	
LQGLHRQPGLRQPS(ph)PSHDGSLS(ph)PLQDR	ddPTM_K562_Methotrexat_30min_R1	1	LQGLHRQPGLRQPSPSHDGSLSPLQDR	27	2	Q96A00-2;Q96A00;A0A0B4J2A3	Q96A00-2	PPP1R14A	Protein phosphatase 1 regulatory subunit 14A	2	LQGLHRQPGLRQPS(0.98)PS(0.049)HDGS(0.289)LS(0.682)PLQDR	46.416000000000004	0.033514999999999996	14263000.0	566.41	640.41	648.74	852.6	512.14	527.71	588.67	759.22	599.85	909.09	True	False	541.5112946001841	746.2268673912273	512.5783395566514	777.8538817468967	579.4953867536149	629.6824889380866	720.6942324810079	732.5178022700077	571.9631044283648	744.4449917377892	0.7274026967877257	1.0023935625509126	0.6885375618689008	1.0448775804524115	0.7784260666471466	0.8458415274823629	0.9680960184830596	0.9839784139860497	0.7683080829024147	1.0	9.540021439416146	-15.999999984892769	0.017712873923716812	2.0885463936783437	1.8638645772048107e-12	0.1156794148679876	0.11859048530372383	9509.7522122302	12.73492762423401	978.7986976738973	573.0036375905074	1.0000000347856855e-16	15.999999984892769	-2.08854639367648	
LQGTSSHSADTPEAS(ph)LDSGEGPSGMASQGCPSASR	ddPTM_K562_Methotrexat_30min_R1	1	LQGTSSHSADTPEASLDSGEGPSGMASQGCPSASR	35	0	Q9UER7-2;Q9UER7;Q9UER7-3;Q9UER7-5;Q9UER7-4	Q9UER7-2	DAXX	Death domain-associated protein 6	1	LQGTSSHS(0.001)ADT(0.023)PEAS(0.563)LDS(0.23)GEGPS(0.119)GMAS(0.062)QGCPS(0.002)ASR	57.673	0.014172	17022000.0	742.96	593.98	965.82	783.86	770.85	774.18	461.13	969.78	752.83	694.87	True	False	710.3003679951855	692.1250990662871	763.1075807112326	715.1402108211615	872.230286404155	923.7793282031558	564.550140866644	935.672287723463	717.8310976190808	569.0223095720311	1.248282107830555	1.2163408840452024	1.3410855213834683	1.2567876492558396	1.5328578014105818	1.6234501049667842	0.9921406091990477	1.64435079606491	1.2615166146279408	1.0	9.152341406942735	-7.634212500166503	17.549332798416017	1.3733296357908193	1.267364245773509	0.01757686751519738	0.21614449455692433	4.517748708745695	687.2161973759387	0.06127572994142863	0.07910629967968083	2.3216005599058803e-08	7.634212500166503	-0.10596539001731031	
LQGTSSHSADTPEASLDS(ph)GEGPSGMASQGCPSASR	ddPTM_K562_Methotrexat_30min_R1	2	LQGTSSHSADTPEASLDSGEGPSGMASQGCPSASR	35	0	Q9UER7-2;Q9UER7;Q9UER7-3;Q9UER7-5;Q9UER7-4	Q9UER7-2	DAXX	Death domain-associated protein 6	1	LQGTSSHSADTPEAS(0.125)LDS(0.49)GEGPS(0.287)GMAS(0.098)QGCPS(0.001)ASR;LQGTSSHSADTPEAS(0.234)LDS(0.632)GEGPS(0.124)GMAS(0.009)QGCPSASR	116.0	7.6518e-23	33898000.0	1479.33	1357.06	1399.3400000000001	1186.92	1176.65	1294.63	1123.84	1227.38	1520.4099999999999	1594.08	True	False	1414.3004244997267	1581.29109892403	1105.6376571125643	1082.8645664121818	1331.4000992377896	1544.7989248904025	1375.88972808442	1184.2123497143937	1449.726470957623	1305.3766650489779	1.0834423981729917	1.211367677439446	0.8469874532888794	0.8295418444388637	1.0199355748310663	1.18341239448496	1.0540174073303177	0.9071805720304965	1.1105809608625332	1.0	10.350250439648896	-8.000369704269971	24.99997637789026	1.0516733353888343	0.9888656832663448	0.04804983993274137	0.12179675083135867	50.80326621216624	3435815.741817538	0.04160818887295612	0.046665645360189745	9.991490866913772e-09	8.000369704269971	-0.06280765212248951	
LQGTSSHSADTPEASLDSGEGPS(ph)GMASQGCPSASR	ddPTM_K562_Methotrexat_30min_R1	1	LQGTSSHSADTPEASLDSGEGPSGMASQGCPSASR	35	0	Q9UER7-2;Q9UER7;Q9UER7-3;Q9UER7-5;Q9UER7-4	Q9UER7-2	DAXX	Death domain-associated protein 6	1	LQGTSSHSADTPEAS(0.009)LDS(0.102)GEGPS(0.565)GMAS(0.323)QGCPS(0.001)ASR	92.238	3.401e-09	16123000.0	645.22	498.73	652.22	522.35	425.91	517.58	611.04	585.55	569.52	533.39	True	False	616.8569013646138	581.1366555394619	515.3279351136649	476.5563865006938	481.9246303202875	617.5950098057165	748.0812744240325	564.9558746071002	543.0431395082812	436.7879023452236	1.412257294793548	1.3304779102607782	1.1798127474381508	1.091047586121189	1.1033378619982686	1.4139471502981065	1.7126877150383444	1.2934329718696664	1.2432650643311014	1.0	8.770789088458658	-8.280947840819508	24.241695069503855	1.3747574718801245	1.2195632358247641	0.05476868619666986	0.19003093669959736	1229.2252866423892	1527458.9204473177	0.06925842060012286	0.06117639514114473	5.236633252727914e-09	8.280947840819508	-0.15519423605536042	
LQHSTS(ph)ILR	ddPTM_K562_Methotrexat_30min_R1	1	LQHSTSILR	9	0	A0A2R8Y695;A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3	A0A2R8Y695	IQSEC1	IQ motif and SEC7 domain-containing protein 1	1	LQHS(0.004)T(0.106)S(0.889)ILR	77.74	0.026518	2430500.0	1221.4	1347.3	1507.8	1428.0	1002.8	1431.9	1203.8	1391.4	1441.5	1625.3	True	False	1167.7087184630652	1569.9184248156653	1191.333385306161	1302.809457113028	1134.6857770073132	1708.5944096387138	1473.7827935186735	1342.463673346972	1374.4849796340543	1330.9424205209912	0.8773547979678724	1.1795539766484624	0.895105127718312	0.9788623737780101	0.8525430999209911	1.2837478040333952	1.1073227292145127	1.0086564622543708	1.0327155844172573	1.0	10.378232443120243	-8.23342132226148	24.997715212212928	1.0883317807858601	0.9668766665953339	0.24608726216909116	0.11287369995769334	1176.187641173254	1049396.135361484	0.03740434879348433	0.0373967404332325	5.842230366299042e-09	8.23342132226148	-0.12145511419052624	
LQLANEEIAQVRS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	LQLANEEIAQVRSK	14	1	A0A494BZT8;Q9Y6A5	A0A494BZT8	TACC3	Transforming acidic coiled-coil-containing protein 3	1	LQLANEEIAQVRS(1)K	77.795	0.028169	12087000.0	1565.6	1701.8	1726.8	1508.6	1663.0	1633.8	1458.0	1563.6	2045.1	1751.0	True	False	1496.778098596509	1982.9935243459504	1364.3682781182385	1376.3433802526015	1881.7136489461118	1949.5087271930508	1784.9936143464233	1508.6073017430838	1950.0237473809261	1433.8769324630875	1.0438678973831952	1.3829593596568992	0.9515239747769368	0.9598755298255228	1.312325769627759	1.3596067298775918	1.2448722578165714	1.05211770103005	1.3599659100667802	1.0	10.485705489633313	-6.70081657731167	24.999999967604953	1.1660454933275004	1.2134101424977748	0.01526034184685432	0.17007378526208533	530.861329603837	218908.48767775449	0.044246685658544053	0.1170656699477888	1.9915142701713076e-07	6.70081657731167	0.04736464917027439	
LQLDGSLTMSSSGSLQAS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	LQLDGSLTMSSSGSLQASPR	20	0	Q6P2E9-2;Q6P2E9	Q6P2E9-2	EDC4	Enhancer of mRNA-decapping protein 4	1	LQLDGSLT(0.003)MS(0.011)S(0.027)S(0.224)GS(0.077)LQAS(0.658)PR	108.12	0.00019271	10809000.0	489.23	323.66	540.06	421.94	259.65	452.53	417.88	494.43	425.4	432.93	True	False	467.7240349874619	377.1393137206548	426.708786356576	384.94917530411135	293.7985261267937	539.9750179438561	511.60022740952223	477.040616654408	405.6232468514237	354.52218182252676	1.319308237873826	1.0637960981224304	1.2036166091581422	1.0858253588679996	0.8287169074060048	1.523106439117445	1.443069724944964	1.3455875009062586	1.1441406705955512	1.0	8.469732086926948	-8.273587548030447	24.9936601280931	1.322273120113389	1.103168193362398	0.2097202077291822	0.1802890601420186	1090.0170979156533	2242596.1093110056	0.06315720034293243	0.05611654876767837	5.326138455849088e-09	8.273587548030447	-0.21910492675099102	
LQLEETMPSPY(ph)GRR	ddPTM_K562_Methotrexat_30min_R1	1	LQLEETMPSPYGRR	14	1	Q02880-2;Q02880	Q02880-2	TOP2B	DNA topoisomerase 2-beta	1	LQLEETMPS(0.019)PY(0.981)GRR	64.313	0.030683999999999996	5174400.0	2267.2	1907.6	2245.1	2473.5	1782.1	1725.1	1668.2	1868.9	2172.3	2643.1	True	False	2167.536602668628	2222.7984763440686	1773.8841911068187	2256.652095356497	2016.477386522469	2058.451160044519	2042.3363151253125	1803.169727697395	2071.310247144682	2164.4089778373436	1.0014450248836102	1.0269771097350868	0.8195697806055428	1.0426181551008542	0.9316526623066005	0.9510453805737321	0.943600001680826	0.833100281028729	0.9569865345939911	1.0	11.079757415319147	-9.01063148314166	23.620696077636307	0.9146960863633588	0.9598078270345504	0.027352186910376663	0.07025826485261545	681.5646182023762	1514274.0450908197	0.030112407876092647	0.018826324318373385	9.758173079200428e-10	9.01063148314166	0.045111740671191614	
LQLEY(ph)VDVVFANR	ddPTM_K562_Methotrexat_30min_R1	1	LQLEYVDVVFANR	13	0	Q5TG81;C9JQ60;A0A590UJJ4;A0A5F9UN28;A0A590UJB6;Q13303-4;Q13303-2;Q13303;Q13303-5;Q14722-2;Q14722-3;Q13303-3;Q14722	Q5TG81	KCNAB2;KCNAB1	Voltage-gated potassium channel subunit beta-2;Voltage-gated potassium channel subunit beta-1	1	LQLEY(1)VDVVFANR	89.82700000000001	0.011796	0.0	284.86	299.92	421.78	629.02	454.85	320.9	365.53	730.02	397.77	587.34	True	False	272.3378954817332	349.4766822316592	333.25414196473855	573.8747932165523	514.6707475785565	382.90938337388314	447.5094073059314	704.3447828207254	379.2777595206648	480.96703455903474	0.5662298575856054	0.7266125474733837	0.6928835409068651	1.193168662261226	1.0700748920358385	0.7961239666351482	0.9304367558500588	1.464434633168758	0.7885732956072514	1.0	8.909794204959207	-7.199315280578753	7.758992153099574	1.0410115200288443	0.6660276412541787	0.4508674369133979	0.1884520538637278	0.28845307798706743	32.57227536040586	0.05135869010210608	0.08921881186441222	6.319529120464906e-08	7.199315280578753	-0.37498387877466566	
LQLQGLDLS(ph)SR	ddPTM_K562_Methotrexat_30min_R1	3	LQLQGLDLSSR	11	0	P49454	P49454	CENPF	Centromere protein F	1	LQLQGLDLS(0.764)S(0.236)R;LQLQGLDLS(0.5)S(0.5)R;LQLQGLDLS(0.886)S(0.114)R	149.57	6.491e-08	19241000.0	6184.5	5164.599999999999	5821.13	6446.9	4822.45	4457.74	4895.24	6273.0	6883.6	7630.200000000001	True	False	5912.636785111211	6017.962366809902	4599.35436344824	5881.710286457975	5456.686702561742	5319.135165600167	5993.122181545394	6052.3750344297505	6563.582938473105	6248.2968418502915	0.9462797518692018	0.9631364384775002	0.7360972885670787	0.9413301632955453	0.8733078534319231	0.8512936085195699	0.959160925486803	0.9686439661271722	1.050459525948106	1.0	12.609247278809802	-9.140757993767618	1.9520830621062502	1.0167821777816712	0.8845093044444129	0.4264882428024611	0.06347016381069466	0.34531943797603903	2.5077181417012007	0.04230640012929733	0.019196671557490528	7.231726720431684e-10	9.140757993767618	-0.13227287333725835	
LQLS(ph)PWESSVVNR	ddPTM_K562_Methotrexat_30min_R1	1	LQLSPWESSVVNR	13	0	A0A087WZ40;Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;Q14244-2;Q14244-4	A0A087WZ40	MAP7	Ensconsin	1	LQLS(0.388)PWES(0.306)S(0.306)VVNR	105.58	0.0031090999999999996	5978400.0	734.78	763.02	824.47	714.23	806.66	645.13	543.04	781.54	845.23	895.54	True	False	702.4799510007297	889.0960858775691	651.4250140491912	651.6145648136123	912.7499290792964	769.792242119019	664.8305434394257	754.052795218911	805.9354417870916	733.3490280399735	0.9579067049127373	1.212377806313948	0.8882878263168342	0.8885462991001524	1.2446323567357944	1.049694228376422	0.9065677024435723	1.0282318055759514	1.098979354947971	1.0	9.518356183736062	-12.97211996419545	2.9249367699379363	0.9745510637810751	1.0307061846839844	0.0057700223849384	0.12041570837736074	104893039.15136549	29377.03058494689	17978447.993876874	0.02922344806707363	1.0663015384520327e-13	12.97211996419545	0.056155120902909306	
LQLSPWES(ph)SVVNR	ddPTM_K562_Methotrexat_30min_R1	1	LQLSPWESSVVNR	13	0	A0A087WZ40;Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;Q14244-2;Q14244-4	A0A087WZ40	MAP7	Ensconsin	1	LQLS(0.212)PWES(0.394)S(0.394)VVNR	85.271	0.026392000000000002	4108000.0	2125.7	2254.4	2716.6	2306.9	1909.8	1958.9	2277.6	2293.3	2358.9	3029.1	True	False	2032.2567732413127	2626.901281751975	2146.4227845355604	2104.6576586933106	2160.9721748390157	2337.429701125271	2788.4097778020678	2212.643339145185	2249.2352538735845	2480.5006374208674	0.8192929856911377	1.0590206033905034	0.865318376522302	0.8484809989332055	0.8711838820916065	0.9423217498366152	1.1241318529558424	0.8920148238485476	0.9067666502243902	1.0	11.27641561262592	-8.520612971512648	24.988351790170704	0.9805148734685567	0.8988107993898262	0.19521696775125275	0.08407431707946351	169.2697397221612	1866855.6652140913	0.032379571120264294	0.025511921973510786	3.0156923095749802e-09	8.520612971512648	-0.08170407407873048	
LQNGQNGERAT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LQNGQNGERATR	12	1	P13521	P13521	SCG2	Secretogranin-2;Secretoneurin;Manserin	1	LQNGQNGERAT(1)R	73.36	0.033044	0.0	872.72	755.87	814.49	762.26	689.39	805.94	892.54	763.96	660.36	787.63	True	False	834.3562737654217	880.7646699067895	643.5396796644216	695.4338492849978	780.0568685790497	961.6764987109611	1092.714815191191	737.0910937833497	629.660007735792	644.9825747092531	1.293610566365355	1.3655635120124336	0.9977628929812841	1.078221143568859	1.2094231676424527	1.4910115969326274	1.6941772662366388	1.1428077636293004	0.9762434404055517	1.0	9.33311637400033	-8.019869514481647	24.16251476256458	1.3027855519484262	1.1785277895406256	0.00896896695613425	0.22438405246564344	1686.2673051348668	2050598.9203212636	0.07889992846880847	0.0800358151867191	9.552795604820199e-09	8.019869514481647	-0.12425776240780051	
LQPLS(ph)PVPSDIEISR	ddPTM_K562_Methotrexat_30min_R1	1	LQPLSPVPSDIEISR	15	0	H0Y327;A0A087WVM4;B7ZM99;Q6UB35	H0Y327	MTHFD1L	Monofunctional C1-tetrahydrofolate synthase, mitochondrial	1	LQPLS(0.833)PVPS(0.167)DIEISR	90.259	0.012189	17915000.0	1379.3	1007.8	1497.6	1386.1	1081.2	1244.9	1047.6	1288.4	1483.5	1718.8	True	False	1318.6676235271873	1174.3218203289741	1183.274225914913	1264.5827650590813	1223.396751196955	1485.4593062080005	1282.5509673452082	1243.0862417279282	1414.5324088013315	1407.5086644874673	0.9368806436494437	0.8343265302431326	0.8406869923928976	0.898454693008635	0.8691930515699133	1.0553819977718704	0.9112206551227439	0.883181946294155	1.0049901961466232	1.0	10.458928088086331														
LQPQEIS(ph)PPPTANLDR	ddPTM_K562_Methotrexat_30min_R1	2	LQPQEISPPPTANLDR	16	0	B4DWJ1;E9PEI4;H0YB16;H0YBZ1;H0YBP1;E7ESA6;Q05397-6;Q05397-2;Q05397-7;Q05397;Q05397-5	B4DWJ1	PTK2	Focal adhesion kinase 1	1	LQPQEIS(0.999)PPPT(0.001)ANLDR;LQPQEIS(0.998)PPPT(0.002)ANLDR	177.07	3.3199e-07	217580000.0	3162.2	3004.5	3993.1	3206.8	3077.9	2913.6	2523.0	3409.0	3216.9	3696.3	True	False	3023.193474311368	3500.9425572319938	3155.002878940199	2925.6648228781937	3482.6977992130114	3476.6119644691366	3088.8469746200453	3289.103537760408	3067.3470211479635	3026.864252120679	0.9987872671175329	1.1566235766203148	1.042333787096578	0.9665662478350052	1.1505959663612157	1.1485853592652382	1.0204775362674228	1.0866372799691957	1.0133744911087181	1.0	11.56360825973376	-9.839132008239476	5.176525454182514	1.0016888830810302	1.0732074992378329	0.1448355285509979	0.06285581066356509	0.4022527236974157	17.945757600495785	0.06019518765285508	0.015867313984232603	1.4483315514766164e-10	9.839132008239476	0.07151861615680266	
LQPSS(ph)SPENSLDPFPPR	ddPTM_K562_Methotrexat_30min_R1	1	LQPSSSPENSLDPFPPR	17	0	Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6	Q8WWM7-6	ATXN2L	Ataxin-2-like protein	1	LQPS(0.112)S(0.355)S(0.355)PENS(0.177)LDPFPPR	108.66	0.0058738	0.0	586.45	735.57	855.27	695.03	539.19	873.06	512.32	737.67	835.56	758.83	True	False	560.6703601954028	857.1104399477907	675.7605149560949	634.0977990036893	610.1029358840975	1041.766488776573	627.2208014416732	711.7257279846634	796.7149979764353	621.3985337869591	0.9022717784326534	1.3793248508720224	1.0874832787870292	1.020436587031092	0.9818222971431501	1.6764868794069818	1.0093696192349082	1.14536113184437	1.2821320853801401	1.0	9.279375027145681	-6.225326665281126	22.628501231154985	1.1771315422142434	0.9022695997634386	0.13470239868416567	0.20797303859174518	10589.464126462524	6635015.051640126	0.050884366301369596	8.747186590384958	5.952142700511083e-07	6.225326665281126	-0.27486194245080486	
LQPSSS(ph)PENSLDPFPPR	ddPTM_K562_Methotrexat_30min_R1	1	LQPSSSPENSLDPFPPR	17	0	Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6	Q8WWM7-6	ATXN2L	Ataxin-2-like protein	1	LQPS(0.038)S(0.126)S(0.418)PENS(0.418)LDPFPPR	178.99	1.134e-07	158510000.0	1910.9	1828.6	2595.1	2404.7	1790.2	1774.5	1771.8	2028.3	1895.7	2117.4	True	False	1826.8991240470555	2130.7450691144713	2050.423974139819	2193.8836845376063	2025.6426784986945	2117.3970108973385	2169.171252331271	1956.9635393486146	1807.5693207716122	1733.9183419744954	1.0536246602978305	1.2288612546125386	1.1825377957562313	1.2652750890444624	1.1682457180722816	1.2211630499774042	1.2510227268610195	1.1286365060998933	1.0424766132373033	1.0	10.759820241813273	-9.68551764167931	2.562124909496876	1.0071085541831146	1.1990401630715317	0.603586561932208	0.056243794212448316	0.17999400335993107	2.1898161133811413	0.04904530088265039	0.014540792829313675	2.06291986677574e-10	9.68551764167931	0.1919316088884171	
LQPSSSPENS(ph)LDPFPPR	ddPTM_K562_Methotrexat_30min_R1	1	LQPSSSPENSLDPFPPR	17	0	Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6	Q8WWM7-6	ATXN2L	Ataxin-2-like protein	1	LQPSS(0.004)S(0.039)PENS(0.958)LDPFPPR	161.48	7.694699999999999e-09	181400000.0	2590.8	2397.1	3059.8	2994.9	2632.0	2326.0	2075.4	3006.3	2874.5	2762.2	True	False	2476.911534136327	2793.1800312667056	2417.5897946410623	2732.341766882221	2978.1541335094207	2775.4665806408607	2540.861280668428	2900.566725012939	2740.8651224128284	2261.938813734747	1.0950391403588116	1.2348610025639077	1.0688130819282933	1.2079644905914935	1.3166377956051392	1.2270299107066538	1.12331123425622	1.2823365103425308	1.2117326542035476	1.0	11.143344189093556	-6.245769656302023	23.277780931431735	1.1951297807320271	1.095038946777365	0.07286290253941563	0.0919756658008256	2743.103893275943	4074774.321033398	0.02217207780744554	0.476606131532615	5.678457029437915e-07	6.245769656302023	-0.10009083395466223	
LQQELDDLLVDLDHQR	ddPTM_K562_Methotrexat_30min_R1	2	LQQELDDLLVDLDHQR	16	0	P35579	P35579	MYH9	Myosin-9	0	;	211.45	5.1956e-22	7942400.0	4052.8	3434.0	4200.4	4374.4	4187.5	3426.6	3741.1000000000004	4701.8	3828.2	5158.1	False	True	3874.6437646857007	4001.4101319802544	3318.7934418623145	3990.90314369414	4738.2296482031525	4088.741954094573	4580.136907154599	4536.435028994391	3650.227817575505	4223.918106989064	0.917310342327556	0.9473219012838723	0.785714438064248	0.944834403179037	1.1217617217443416	0.9679974494129461	1.0843337373364605	1.073987448167668	0.864180536913273	1.0	12.044366148765162	-7.527987438740599	24.943075120700836	1.0240771717800925	0.8857425599366746	0.3833758267608034	0.0772980629241655	130.76814657727647	638467.8474992684	0.02222226548548607	0.02878958015885846	2.9649171436757387e-08	7.527987438740599	-0.1383346118434179	
LQQELDDLTVDLDHQR	ddPTM_K562_Methotrexat_30min_R1	4	LQQELDDLTVDLDHQR	16	0	P35580;P35580-5;P35580-2;P35580-3;P35580-4	P35580	MYH10	Myosin-10	0	;;;	226.06	1.5443e-39	16574400.0	13462.4	11574.1	15149.6	13955.7	12381.1	11401.099999999999	11423.4	13451.4	13460.0	16010.0	False	True	12870.609015422602	13486.523298937866	11969.905991533506	12732.225448622052	14009.431665043126	13604.20121777495	13985.388240140557	12978.3066376739	12834.24753789413	13110.433859928055	0.9817073296682823	1.0286862695032029	0.9130060926602465	0.9711521056170388	1.0685711712304848	1.0376621676385624	1.0667372559566313	0.9899219794199183	0.9789338533732217	1.0	13.678427808603374	-6.199221612603223	19.6659728048326	1.0065957162755912	0.9817046702924258	0.025891478273915802	0.044735938625473724	22568.14883273306	7129589.9463478	0.01211790231017074	12.906026171103749	6.320892253920117e-07	6.199221612603223	-0.024891045983165383	
LQQGAGLES(ph)PQGQPEPGAAS(ph)PQR	ddPTM_K562_Methotrexat_30min_R1	3	LQQGAGLESPQGQPEPGAASPQR	23	0	Q9H6F5	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	2	LQQGAGLES(1)PQGQPEPGAAS(1)PQR;LQQGAGLES(1)PQGQPEPGAAS(1)PQR;LQQGAGLES(1)PQGQPEPGAAS(1)PQR	147.49	9.152100000000001e-17	42270400.0	2819.05	2557.3500000000004	3336.42	2930.49	2741.1400000000003	2804.45	2520.83	3461.07	3045.5400000000004	2895.0	True	False	2695.127937435162	2979.90861998244	2636.151036877029	2673.5784915792433	3101.6479565076056	3346.3702717447377	3086.1902968812715	3339.3422063468483	2903.9535101454735	2370.6874468764363	1.1368550253160539	1.2569808069421804	1.1119774731799257	1.1277650687786318	1.3083327203652537	1.4115611385861258	1.3018123924128275	1.4085965700567948	1.2249415307663845	1.0	11.211089754076355	-7.769048376082313	24.780491029170115	1.3043851844180394	1.1621209548413292	0.1731048050904752	0.11604395685595995	207.54554919515036	675919.0516936643	0.03387945828134902	0.03914935695428491	1.7019689154399974e-08	7.769048376082313	-0.14226422957671025	
LQQGAGLES(ph)PQGQPEPGAAS(ph)PQRQQDLHLESPQR	ddPTM_K562_Methotrexat_30min_R1	1	LQQGAGLESPQGQPEPGAASPQRQQDLHLESPQR	34	1	Q9H6F5	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	2	LQQGAGLES(0.998)PQGQPEPGAAS(0.963)PQRQQDLHLES(0.039)PQR	50.891000000000005	0.0050238999999999995	37835000.0	1156.5	1009.8	1381.6	1144.6	795.76	1038.8	889.24	1096.6	1252.7	1341.4	True	False	1105.6616447540002	1176.6522863347866	1091.6210406811201	1044.2546951061427	900.41638802487	1239.5333980953246	1088.6747061875274	1058.031956441203	1194.4622504249603	1098.4594615682392	1.0065566217395758	1.07118407870502	0.9937745350407778	0.950653830788885	0.8197083456674598	1.1284288965253921	0.9910922926853009	0.9631961792478723	1.0873976621036707	1.0	10.10126591302716	-9.750592201205952	24.97953452013628	1.0436988500669029	0.990954212911273	0.0687738379573386	0.07818343118116589	566.5417884428916	1304685.648387567	0.055223185574391626	0.02041198756016111	1.7758562119981207e-10	9.750592201205952	-0.052744637155629936	
LQQGAGLESPQGQPEPGAAS(ph)PQR	ddPTM_K562_Methotrexat_30min_R1	4	LQQGAGLESPQGQPEPGAASPQR	23	0	Q9H6F5	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	1	LQQGAGLESPQGQPEPGAAS(1)PQR;LQQGAGLESPQGQPEPGAAS(1)PQR;LQQGAGLESPQGQPEPGAAS(1)PQR;LQQGAGLESPQGQPEPGAAS(1)PQR	151.19	4.3386e-18	463240000.0	9732.400000000001	8856.5	11598.3	9191.0	9352.5	8742.4	7431.7	10499.4	10632.4	10923.9	True	False	9304.575349246717	10319.886090239697	9163.975330147528	8385.239299948076	10582.517679957013	10431.745070762969	9098.447903798578	10130.130150883424	10138.102044718084	8945.475855244733	1.0401431404894401	1.153643054571451	1.0244256961215417	0.9373720789858049	1.1830022070600619	1.1661475856141108	1.017100493146394	1.132430550907376	1.133321715778162	1.0	13.126942513249148														
LQQGAGLESPQGQPEPGAAS(ph)PQRQQDLHLESPQR	ddPTM_K562_Methotrexat_30min_R1	5	LQQGAGLESPQGQPEPGAASPQRQQDLHLESPQR	34	1	Q9H6F5	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	1	LQQGAGLES(0.03)PQGQPEPGAAS(0.943)PQRQQDLHLES(0.027)PQR;LQQGAGLES(0.002)PQGQPEPGAAS(0.954)PQRQQDLHLES(0.044)PQR;LQQGAGLES(0.007)PQGQPEPGAAS(0.982)PQRQQDLHLES(0.011)PQR;LQQGAGLESPQGQPEPGAAS(0.998)PQRQQDLHLES(0.002)PQR;LQQGAGLES(0.03)PQGQPEPGAAS(0.968)PQRQQDLHLES(0.002)PQR	81.803	2.0002e-06	1056436000.0	7817.3	6851.299999999999	9746.800000000001	7842.099999999999	7020.19	7566.41	7617.1	8410.699999999999	8665.6	9576.199999999999	True	False	7473.66085217072	7983.360872811967	7701.07987790297	7154.595268645713	7943.468034392669	9028.511646787108	9325.428573277197	8114.890913769859	8262.73814742759	7841.857384724737	0.9530472801926707	1.0180446393175764	0.9820479384009215	0.9123597787664754	1.0129574722776598	1.1513231118400433	1.1891861985965633	1.0348174565858552	1.0536710554724817	1.0	12.936979689303978	-8.045812681909318	6.518137491120288	1.0936670368764545	0.9700219284303685	0.4945032230140719	0.05689251467467307	0.1882550485685852	20.6341130745994	0.01955552008892208	0.01989734702610287	8.998856327682238e-09	8.045812681909318	-0.123645108446086	
LQQGAGLESPQGQPEPGAAS(ph)PQRQQDLHLESPQRQPEYSPESPR	ddPTM_K562_Methotrexat_30min_R1	2	LQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPR	44	2	Q9H6F5	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	1	LQQGAGLES(0.002)PQGQPEPGAAS(0.949)PQRQQDLHLES(0.037)PQRQPEY(0.005)S(0.006)PES(0.001)PR;LQQGAGLESPQGQPEPGAAS(0.727)PQRQQDLHLES(0.26)PQRQPEY(0.008)S(0.004)PES(0.001)PR	59.426	6.8388e-05	252640000.0	492.84000000000003	524.05	734.22	778.9100000000001	618.4300000000001	634.1099999999999	590.48	534.1600000000001	595.5	751.2	True	False	471.1753437099535	610.640355173049	580.1172557099678	710.6241696357907	699.7643847972001	756.6427830826206	722.9101710557452	515.3732900352297	567.8153349788965	615.1504007231706	0.7659514537518628	0.9926683855772188	0.9430494640464872	1.1552039449220568	1.1375500755173977	1.2300126638836804	1.1751762986838539	0.8378004621786104	0.9230512315547109	1.0	9.264795373966168	-6.074199833870168	1.2724366382653765	1.06697982066332	0.5346706095948794	0.3452822396691031	0.11845957917345207	2.651582085570151	2.7582192061199646	0.03912725100675481	2.0565340159665886	8.429467996184777e-07	6.074199833870168	-0.5323092110684406	
LQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEY(ph)S(ph)PESPR	ddPTM_K562_Methotrexat_30min_R1	1	LQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPR	44	2	Q9H6F5	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	2	LQQGAGLES(0.006)PQGQPEPGAAS(0.339)PQRQQDLHLES(0.196)PQRQPEY(0.566)S(0.584)PES(0.309)PR	47.91	0.00021909	97743000.0	2563.3	1865.0	2829.8	2950.0	1870.1	1821.7	2152.3	1994.7	2138.4	2759.5	True	False	2450.620401208757	2173.1595504202605	2235.8636515050894	2691.3780801704725	2116.050928980232	2173.7177428862683	2635.008063208374	1924.5452703932767	2038.9862507453774	2259.7278098982815	1.084475922486907	0.9616908465263709	0.9894393659764419	1.1910187007397237	0.9364185012510349	0.9619378640935144	1.1660732109709202	0.8516712773826983	0.9023149787394791	1.0	11.141933291391451	-9.284872868614313	24.98221472999488	0.9077448453122726	1.0351411118695135	0.28707318966759665	0.08840146038617061	1020.4354386455472	1087869.4141798846	0.04749019432725802	0.022835906909138996	5.189519299272993e-10	9.284872868614313	0.1273962665572409	
LQQQAALSPT(ph)TAPAVSSVSK	ddPTM_K562_Methotrexat_30min_R1	1	LQQQAALSPTTAPAVSSVSK	20	0	A0A0U1RRM1;Q8WXI9;A0A0U1RR30	A0A0U1RRM1	GATAD2B	Transcriptional repressor p66-beta	1	LQQQAALS(0.081)PT(0.457)T(0.457)APAVS(0.004)S(0.001)VSK	99.991	0.00071362	10293000.0	2135.4	1243.9	2445.4	1972.3	1581.1	1774.6	1218.5	1838.3	1664.7	2417.7	True	False	2041.5303728557647	1449.4333323151536	1932.143958368277	1799.3915211932963	1789.0423634087172	2117.51633448206	1491.7796427168169	1773.6459470416414	1587.3084603515863	1979.8311020079996	1.031163906246946	0.732099486084999	0.9759135293958374	0.9088611242485803	0.9036338309839768	1.0695439284363277	0.7534883360524101	0.895857199759495	0.8017393295527553	1.0	10.951161644922141	-11.9206070360158	4.864766314267722	1.0000003614455528	0.8957735134829988	0.07918639437623798	0.10538448727588064	159557019.79689664	27.53639654025367	1045.1325260049236	0.024187066504155048	1.200585140893696e-12	11.9206070360158	-0.10422684796255399	
LQQQHSEQPPLQPS(ph)PVMTR	ddPTM_K562_Methotrexat_30min_R1	5	LQQQHSEQPPLQPSPVMTR	19	0	A0A0A0MSK5;Q5JTV8;H0YDU3;J3KN66;Q5JTV8-2;Q5JTV8-3	A0A0A0MSK5	TOR1AIP1	Torsin-1A-interacting protein 1	1	LQQQHSEQPPLQPS(0.969)PVMT(0.031)R;LQQQHSEQPPLQPS(1)PVMTR;LQQQHSEQPPLQPS(0.985)PVMT(0.015)R;LQQQHSEQPPLQPS(0.997)PVMT(0.003)R;LQQQHSEQPPLQPS(0.998)PVMT(0.002)R	199.91	4.429899999999999e-87	501147000.0	7736.26	6842.24	8410.79	7932.4400000000005	7169.82	7056.670000000001	6499.0	8006.81	8209.24	8602.27	True	False	7396.183273536167	7972.803861805638	6645.480119246058	7237.015301107618	8112.777002096702	8420.271606023627	7956.566186308241	7725.205953996887	7827.59422421857	7044.3155452994015	1.0499505915051695	1.1318067469487234	0.943381947686957	1.027355355473365	1.1516771146786964	1.1953285669666498	1.129501671971179	1.0966581358144634	1.1111930142655013	1.0	12.782243819816797	-7.7543393031934	24.979847012927397	1.123728195809667	1.0380480290770853	0.24853316793317093	0.06336248774666668	214.20489363701338	753622.5836988838	0.019115331344682896	0.02414202117987831	1.7605999971068735e-08	7.7543393031934	-0.08568016673258172	
LQQQHSEQPPLQPS(ph)PVMTRR	ddPTM_K562_Methotrexat_30min_R1	3	LQQQHSEQPPLQPSPVMTRR	20	1	A0A0A0MSK5;Q5JTV8;H0YDU3;J3KN66;Q5JTV8-2;Q5JTV8-3	A0A0A0MSK5	TOR1AIP1	Torsin-1A-interacting protein 1	1	LQQQHSEQPPLQPS(0.981)PVMT(0.019)RR;LQQQHSEQPPLQPS(0.879)PVMT(0.12)RR;LQQQHSEQPPLQPS(0.963)PVMT(0.037)RR	97.081	0.00011799	238039000.0	7261.200000000001	6773.4	9118.8	8775.6	6124.5	6839.0	6362.7	7843.299999999999	7143.799999999999	8875.8	True	False	6942.006342315383	7892.589221885565	7204.888495775186	8006.256772997965	6929.979099801838	8160.53995915858	7789.697441702327	7567.44669337524	6811.686297266571	7268.306611739508	0.9551064248036679	1.0858910669973303	0.991274705464146	1.1015298611737905	0.9534516731323338	1.1227567018124922	1.0717348424900908	1.0411567779973083	0.9371765200802866	1.0	12.827403565255825	-9.744053143320171	24.103989116188398	0.9685882988952073	1.043178192388761	0.19931753491564586	0.0573205613109335	199.47180614984197	276548.0732490476	0.036445770171373425	0.013692245609709096	1.8027971244557114e-10	9.744053143320171	0.07458989349355383	
LQQQHSEQPPLQPSPVMT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LQQQHSEQPPLQPSPVMTR	19	0	A0A0A0MSK5;Q5JTV8;H0YDU3;J3KN66;Q5JTV8-2;Q5JTV8-3	A0A0A0MSK5	TOR1AIP1	Torsin-1A-interacting protein 1	1	LQQQHSEQPPLQPS(0.393)PVMT(0.607)R	89.631	0.016247	290390000.0	1647.2	1304.8	2176.2	1433.6	1635.6	1425.0	1293.7	1668.5	1712.1	1917.6	True	False	1574.7910603015903	1520.3960221921473	1719.4453595326095	1307.9185138075898	1850.710068680854	1700.3610822928752	1583.8451569821466	1609.8179092851967	1632.5048446975122	1570.304058076081	1.0028574098133622	0.9682175973326589	1.0949760657431242	0.8329078098480093	1.178567971701177	1.0828228288323591	1.0086232337211534	1.0251631848022653	1.0396106641268181	1.0	10.616828219961526	-6.6974141115349175	24.999989921064724	1.0327199975350705	0.9855373285148876	0.04868168044594978	0.08362925437586441	218.24740827466397	85214.2520007862	0.020875710284456134	0.05523191472354437	2.007178001328949e-07	6.6974141115349175	-0.047182669020182866	
LQSFDS(ph)PER	ddPTM_K562_Methotrexat_30min_R1	4	LQSFDSPER	9	0	P78332;E9PGM9;P78332-2	P78332	RBM6	RNA-binding protein 6	1	LQS(0.041)FDS(0.959)PER;LQSFDS(1)PER;LQSFDS(1)PER;LQS(0.001)FDS(0.999)PER	152.96	4.8035e-11	212087000.0	13697.8	11458.1	15543.7	14045.0	12749.4	11197.9	11677.6	15643.4	14185.199999999999	16039.9	True	False	13095.661113282613	13351.356270600734	12281.289787228667	12813.696656269252	14426.169570579417	13361.735693619212	14296.599060968309	15093.212755236471	13525.733148182448	13134.91868019114	0.9970112059416301	1.0164780304834322	0.9350107211360329	0.975544422333857	1.0983067289434856	1.0172682464924687	1.0884421448706116	1.149090688928181	1.0297538551632373	1.0	13.68111964815589	-7.752131868935954	24.88526358721837	1.0701693040826477	0.9802586830912857	0.44309636441339584	0.04513530058015155	164.86042293736506	440781.44220558426	0.013418323271255148	0.01708267246901896	1.7695715650047144e-08	7.752131868935954	-0.08991062099136193	
LQSIGTENTEENRR	ddPTM_K562_Methotrexat_30min_R1	4	LQSIGTENTEENRR	14	1	H3BMQ8;H3BUH7;H3BR04;H3BPS8;H3BQN4;J3KPS3;P04075;P04075-2	H3BMQ8	ALDOA	Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A	0	;;;	111.07	0.0022438000000000002	491780000.0	5633.32	5328.9	6694.7	5668.5	5146.62	5303.83	5345.5	5907.51	6217.460000000001	6956.299999999999	False	True	5385.685997946907	6209.410149187408	5289.57395848863	5171.5514059140105	5823.49073959052	6328.720083577137	6544.364448209062	5699.739524891456	5928.411641675723	5696.446662074802	0.9454465770395353	1.0900497305676116	0.9285742976766541	0.9078556708596285	1.0223023377646172	1.1109943547285044	1.1488502985166942	1.0005780555865778	1.0407209956243904	1.0	12.475846558054847	-7.997781882195403	24.937054189163792	1.065897568409817	0.9727850432702161	0.3246629119913842	0.062311054969340224	86.25217719859934	969659.981508365	0.020269143527322547	0.022840130515891715	1.0051204700175664e-08	7.997781882195403	-0.093112525139601	
LQSKS(ph)LHLSPQEQSASY(ph)QDRR	ddPTM_K562_Methotrexat_30min_R1	1	LQSKSLHLSPQEQSASYQDRR	21	2	Q5JW53;Q9H410-4;Q9H410	Q5JW53	DSN1	Kinetochore-associated protein DSN1 homolog	2	LQS(0.216)KS(0.767)LHLS(0.016)PQEQS(0.002)AS(0.07)Y(0.928)QDRR	46.494	0.031386000000000004	0.0	295.91	218.85	286.68	407.99	308.45	143.78	253.96	243.36	244.72	295.44	True	False	282.90215071262963	255.01124268604494	226.50978571400074	372.2221501453392	349.0165814897342	171.56345011373298	310.9169947183938	234.80089086223893	233.34302061466937	241.93295312786665	1.1693411213937024	1.0540574956370914	0.9362502411744033	1.538534314292489	1.4426169605149721	0.7091363449900027	1.2851370212228495	0.970520500934578	0.9644945742109909	1.0	7.918463478630644	-8.249714208065795	24.989597414207413	1.0027201636607754	1.219513448494792	0.252088555677059	0.20739737152531648	1312.6529086194018	2797629.7893125606	0.07245510040587476	0.07188815811968857	5.627115014477076e-09	8.249714208065795	0.2167932848340166	
LQT(ph)MY(ph)EMET(ph)SGK	ddPTM_K562_Methotrexat_30min_R1	1	LQTMYEMETSGK	12	0	Q9Y619	Q9Y619	SLC25A15	Mitochondrial ornithine transporter 1	3	LQT(1)MY(1)EMET(0.831)S(0.17)GK	52.527	0.033836	0.0	531.16	485.05	850.2	564.78	598.55	556.49	506.59	476.88	652.62	1019.3	True	False	507.8108423930259	565.1962680597035	671.7546386704456	515.2666142775186	677.2698163419697	664.023816621166	620.2057030807646	460.10786010184313	622.2798386463941	834.6948927810535	0.6083789978648263	0.6771291797132855	0.8047906420420039	0.6173113298450201	0.8113980595777078	0.7955287882602923	0.743032823663687	0.5512287951934705	0.745517726331198	1.0	9.705105133336124	-13.412291824323725	1.938356184845789	2.8406596122773844	0.7077460937997242	0.5122588406005378	0.08603855650312177	6600544.341410812	555319.1918217241	53255078.02980291	0.02242467244697186	3.8699751442355617e-14	13.412291824323725	-2.13291351847766	
LQWDGSSDLS(ph)PSDSGSSK	ddPTM_K562_Methotrexat_30min_R1	1	LQWDGSSDLSPSDSGSSK	18	0	K7EJK2;K7ENU1;K7EKG9;Q14CW9;Q14CW9-2	K7EJK2	ATXN7L3	Ataxin-7-like protein 3	1	LQWDGS(0.001)S(0.022)DLS(0.962)PS(0.014)DS(0.002)GSSK	95.954	0.0015960999999999998	13271000.0	1656.3	941.76	2255.6	1512.0	1309.0	897.95	998.35	1798.6	1511.7	1665.1	True	False	1583.4910351976218	1097.369832817042	1782.1803845978104	1379.4453075314414	1481.156444059207	1071.4661290139552	1222.2554011541515	1735.342218543816	1441.421396956505	1363.534254851106	1.1613137180558288	0.804798140503534	1.3070301521632248	1.0116689790694497	1.086262731419934	0.7858006685214932	0.8963877488267563	1.2726795915613505	1.0571215147901833	1.0	10.413135228907235	-13.8750602594296	1.61467275387866	0.0003836566505864066	1.0386416216789234	0.00522531355563538	0.16853455592390487	3155884.895423672	68515.44448866836	11616320.882741306	0.043434892353609644	1.3333364156144474e-14	13.8750602594296	1.038257965028337	
LQY(ph)LLGSHAGS(ph)VS(ph)TIHFNQR	ddPTM_K562_Methotrexat_30min_R1	2	LQYLLGSHAGSVSTIHFNQR	20	0	A6NGE4	A6NGE4	DCAF8L1	DDB1- and CUL4-associated factor 8-like protein 1	3	LQY(0.877)LLGS(0.124)HAGS(0.999)VS(0.537)T(0.464)IHFNQR;LQY(0.849)LLGS(0.152)HAGS(0.999)VS(0.541)T(0.46)IHFNQR	57.768	0.022307	218090000.0	1164.85	1074.67	1361.3899999999999	1197.77	1177.8899999999999	1053.51	1044.73	1081.27	1305.72	1345.23	True	False	1113.644588752007	1252.2409512333202	1075.652843495128	1092.7633637578936	1332.8031809724203	1257.0858974079767	1279.0372967874753	1043.24112123033	1245.0173621975578	1101.5958114547796	1.010937566366847	1.1367517361740846	0.9764496490546829	0.9919821339142333	1.209884031069713	1.1411498521838561	1.1610767610838721	0.94702713135103	1.1301943500977678	1.0	10.105379263767476	-4.396010143464094	19.043229814261156	1.0744633591495774	0.518924731592402	0.0	0.08916482694341098	0.0	0.0	0.020553593318686645	0.0	4.017814266563268e-05	4.396010143464094	-0.5555386275571753	
LRCDS(ph)ADLR	ddPTM_K562_Methotrexat_30min_R1	2	LRCDSADLR	9	1	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;Q9NYF8-4	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	LRCDS(1)ADLR;LRCDS(1)ADLR	78.548	0.02506	30369000.0	5396.299999999999	5130.4	6994.5	5458.9	5279.6	5376.3	4859.8	5888.4	5854.4	6644.7	True	False	5159.085113347179	5978.111398110511	5526.450035498036	4980.326712489014	5973.959940454534	6415.193885425392	5949.733859396951	5681.301634423109	5582.230221831152	5441.2804415405335	0.9481380658054339	1.0986589392584203	1.015652491150298	0.91528579825946	1.0978959832408839	1.1789860776977568	1.093443707472733	1.044111160132489	1.0259037889711697	1.0	12.40973047093402	-7.816254001153068	24.999999049028244	1.081878271577251	1.003392739368735	0.25677497648020553	0.06412934451365328	131.07774562414883	59781.374673191014	0.020773708436415454	0.023555187965175025	1.5266729082794013e-08	7.816254001153068	-0.07848553220851606	
LRDLEDSLAR	ddPTM_K562_Methotrexat_30min_R1	4	LRDLEDSLAR	10	1	P02545-3;P02545;P02545-5;P02545-4;P02545-6;Q3BDU5;P02545-2;Q5TCI8	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	0	;;;	179.42	8.3996e-34	39744100.0	12768.899999999998	10703.3	14337.500000000002	13919.0	11282.8	10709.5	10944.5	13170.2	12707.2	15455.5	False	True	12207.594445049152	12471.838400007055	11328.254683530362	12698.742880641636	12766.685964118571	12778.959305835475	13399.082724426917	12706.996601059578	12116.445045581584	12656.359183142913	0.9645423512718038	0.9854207058707987	0.8950642534401629	1.0033488064683858	1.0087171025552595	1.009686839707888	1.0586838229333158	1.0040009466532926	0.9573404855418102	1.0	13.627574828245384	-7.483858238267074	24.49883066421433	1.0090784226712226	0.9515762771890324	0.4145867028363276	0.031230405658835482	420.4470970685552	263975.1778384378	0.008965850715454974	0.013295748146639027	3.282024069521467e-08	7.483858238267074	-0.05750214548219024	
LREEESCYHHYS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LREEESCYHHYSR	13	1	V9GYB8	V9GYB8	SLC25A16		1	LREEESCY(0.005)HHY(0.018)S(0.977)R	97.47200000000001	0.017387	10836000.0	2152.2	2056.5	2575.9	2394.1	1978.1	1616.6	1655.3	2131.7	1867.7	2116.0	True	False	2057.591864971517	2396.301670476818	2035.2537917562945	2184.212970080044	2238.254821996575	1928.9850706208158	2026.5431617473507	2056.7269027409366	1780.8710346600935	1732.7718955407736	1.1874568546885231	1.382929672765131	1.1745653291087808	1.2605311614881556	1.2917192550021406	1.1132365867573164	1.1695383373671902	1.1869576763299599	1.0277584944926113	1.0	10.758866033313781	-9.372469630925261	0.5060495902473211	0.9920275942377983	1.274373032192839	0.6120146641947461	0.06835344871087962	0.5712355036220248	0.3483574079319634	0.06871626095266262	0.043821020602798744	4.2416064331544336e-10	9.372469630925261	0.28234543795504075	
LREQGTESRS(ph)S(ph)TPLPTISSSAENTR	ddPTM_K562_Methotrexat_30min_R1	1	LREQGTESRSSTPLPTISSSAENTR	25	2	G5E972;P42167;H0YJH7;P42167-2;P42167-3;P42166	G5E972;P42166	TMPO	Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin	2	LREQGT(0.047)ES(0.068)RS(0.751)S(0.886)T(0.24)PLPT(0.004)IS(0.003)S(0.001)S(0.001)AENTR	63.522	0.0070969	33488000.0	1855.6	1896.2	2837.1	2433.6	2201.8	1765.1	2163.6	2589.7	2290.6	2822.9	True	False	1774.0300458327026	2209.5148201109364	2241.6314812654937	2220.250066407749	2491.3752929943175	2106.180593933442	2648.842375857285	2498.6187831440657	2184.1105059658457	2311.64545553972	0.7674317190732454	0.9558190745972599	0.96971249457548	0.9604630593705676	1.077749741866291	0.9111174851169787	1.1458687877544078	1.080883219853752	0.9448293641794228	1.0	11.174704428712714	-5.371818101615539	0.7968771770279063	1.028141610152431	1.2374342231162463e-14	0.5483268709921745	0.06716122789502624	6.808688632829687	1.1699978653842562	0.024128400444753527	8.638078550634845	4.247974473713524e-06	5.371818101615539	-1.0281416101524186	
LRGTQEVAPPTPLTPTSHT(ph)ANTSPRPVSGMER	ddPTM_K562_Methotrexat_30min_R1	1	LRGTQEVAPPTPLTPTSHTANTSPRPVSGMER	32	2	H7BYT1;P48730-2;P48730	H7BYT1	CSNK1D	Casein kinase I isoform delta	1	LRGTQEVAPPTPLT(0.012)PT(0.107)S(0.107)HT(0.256)ANT(0.256)S(0.256)PRPVS(0.006)GMER	52.577	0.0014529000000000002	34916000.0	1436.3	1356.2	2242.7	2019.3	1868.2	1545.3	1518.2	1899.1	1753.0	2258.8	True	False	1373.1619717770595	1580.2889985415306	1771.9879183088785	1842.271104165503	2113.901045677165	1843.9073547138091	1858.6949967769153	1832.3075765798735	1671.503412624696	1849.7094317804806	0.7423663134243148	0.8543444561562228	0.9579817715494972	0.9959786507614778	1.1428287110167246	0.996863249455842	1.0048578251492104	0.9905921141441894	0.903657290115968	1.0	10.853082942293682	-6.584832263435155	1.7048813657717623	1.0092931747482632	0.7248913717913724	0.7063614656378501	0.054814157144145684	0.29610931345096336	1.335644996132267	0.01659809646313945	0.11300606408019075	2.601164010809042e-07	6.584832263435155	-0.28440180295689077	
LRGTQEVAPPTPLTPTSHTANT(ph)SPRPVSGMER	ddPTM_K562_Methotrexat_30min_R1	2	LRGTQEVAPPTPLTPTSHTANTSPRPVSGMER	32	2	H7BYT1;P48730-2;P48730	H7BYT1	CSNK1D	Casein kinase I isoform delta	1	LRGTQEVAPPTPLT(0.004)PT(0.11)S(0.11)HT(0.11)ANT(0.314)S(0.314)PRPVS(0.039)GMER;LRGTQEVAPPTPLT(0.013)PT(0.161)S(0.161)HT(0.161)ANT(0.202)S(0.202)PRPVS(0.098)GMER	55.153	0.0008648999999999999	121830000.0	2904.1499999999996	2966.77	4343.1	3975.5	2934.29	3300.11	3169.3	3335.8599999999997	3739.2	4111.4	True	False	2776.487043331024	3456.9783160323404	3431.542661973197	3626.9740873619367	3320.20056702711	3937.809551779327	3880.096201610508	3218.535913016554	3565.3654081496074	3366.7856197194387	0.8246699840551162	1.0267889632724574	1.0192340854358153	1.077280972723229	0.9861633445208161	1.169605076342067	1.1524631027543253	0.9559669894529136	1.0589820115860886	1.0	11.717156145057137	-5.573659748470952	1.2742169177037632	1.0602334769171395	1.5139471128534597e-14	0.5205676583745885	0.06497903002440374	5.7516635597109955	2.281807142893274	0.01948046524496348	12.234635593080487	2.668948855221667e-06	5.573659748470952	-1.0602334769171244	
LRIMS(ph)PMRTGNTY(ph)S(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LRIMSPMRTGNTYSR	15	2	Q03164-2;Q03164;Q03164-3	Q03164-2	KMT2A	Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180	3	LRIMS(1)PMRTGNTY(1)S(1)R	78.32600000000001	0.012704	48202000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
LRLDTGPQSLS(ph)GK	ddPTM_K562_Methotrexat_30min_R1	1	LRLDTGPQSLSGK	13	1	P35269;M0QXD6	P35269	GTF2F1	General transcription factor IIF subunit 1	1	LRLDTGPQS(0.001)LS(0.999)GK	87.15700000000001	0.011874	0.0	1629.9	1313.2	2185.0	2023.8	1818.1	1508.7	1537.9	1730.9	1683.2	2687.9	True	False	1558.251547587155	1530.1839794165599	1726.3983597917245	1846.3765961522038	2057.2120175279174	1800.2349227054463	1882.8132232533371	1670.0232659165415	1604.9483993895537	2201.0952637164673	0.7079437102400127	0.6951920730740664	0.784336047716883	0.8388444728351583	0.9346310681957453	0.8178814213001471	0.8553983347700622	0.7587237560525979	0.7291589900019403	1.0	11.104005871289624	-15.999999951477369	0.02402865281080021	2.0424213074642275	2.1893991202240833e-09	0.3874921427030972	0.07339984130437602	2938.0056987290136	5.321620953437418	323.57610533018453	156.61898429561506	1.0000001117274936e-16	15.999999951477369	-2.042421305274828	
LRLDTGS(ph)PEPETR	ddPTM_K562_Methotrexat_30min_R1	1	LRLDTGSPEPETR	13	1	Q9Y2F5	Q9Y2F5	ICE1	Little elongation complex subunit 1	1	LRLDT(0.22)GS(0.777)PEPET(0.002)R	82.663	0.017019	0.0	1471.6	1408.7	1815.3	1627.3	1435.3	1258.2	1377.3	1529.7	1455.9	1903.4	True	False	1406.910226044086	1641.463731194112	1434.2933375422956	1484.6371355462402	1624.0671078366531	1501.3293429760665	1686.1945850749855	1475.8995839577863	1388.2155267771218	1558.6758156768933	0.9026317159050168	1.0531142619167835	0.9201999050196454	0.952498987033747	1.0419531062855185	0.9632082103770099	1.0818122460844843	0.9468932340602466	0.8906377534152315	1.0	10.606105182069447	-6.209189660071743	22.23822775219542	0.9830474524584555	0.9026300309554138	0.14883692136413595	0.0579175334681604	26857.95851410588	11429797.992263116	0.014307876240058028	12.333126026867507	6.177465660755032e-07	6.209189660071743	-0.08041742150304165	
LRLS(ph)PSPT(ph)SQR	ddPTM_K562_Methotrexat_30min_R1	2	LRLSPSPTSQR	11	1	P02545-3;P02545;P02545-5;P02545-4;P02545-6;A0A0C4DGC5;Q3BDU5;P02545-2;Q5TCI8	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	2	LRLS(0.831)PS(0.19)PT(0.895)S(0.084)QR;LRLS(0.941)PS(0.079)PT(0.765)S(0.216)QR	120.6	0.0083223	815070000.0	9903.7	9998.8	12299.5	10163.400000000001	8732.1	8752.2	8641.9	9410.8	9587.0	10819.0	True	False	9468.345206355545	11650.931749459562	9718.0030326125	9272.390501696473	9880.524205629792	10443.438782065758	10580.06606023345	9079.816829907786	9141.30246254019	8859.574261746517	1.068713340689242	1.3150667746830056	1.0968927789874137	1.0465954940670679	1.1152369079732747	1.1787743376290645	1.1941957646786254	1.0248592722013994	1.0317992933373907	1.0	13.113021657796283	-9.278466150642641	22.464687348996957	1.0212468509173969	1.1461150883027356	0.3922368231589759	0.07195162563554615	248.54955747832437	327924.2411244203	0.04032827408534634	0.019487070787783705	5.266642620470112e-10	9.278466150642641	0.1248682373853387	
LRLS(ph)PSPTSQR	ddPTM_K562_Methotrexat_30min_R1	1	LRLSPSPTSQR	11	1	P02545-3;P02545;P02545-5;P02545-4;P02545-6;A0A0C4DGC5;Q3BDU5;P02545-2;Q5TCI8	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	1	LRLS(0.926)PS(0.071)PT(0.003)SQR	98.368	0.020408000000000003	446020000.0	3126.7	2817.4	3267.3	2851.5	2367.0	2423.7	2744.9	2730.0	3003.7	2895.5	True	False	2989.2540118048705	3282.927462388224	2581.53838029634	2601.5134222393563	2678.3019886082056	2892.0457229145536	3360.5136982301087	2633.9843526212685	2864.0586426131185	2371.0968920313358	1.2607051284369721	1.3845606535191888	1.088752800010934	1.097177188744329	1.129562439059032	1.2197079472517538	1.4172823175315845	1.1108716651240327	1.2079045155170605	1.0	11.211338902689509	-6.756751526874528	24.99807416377409	1.1710135054328932	1.3226328981230597	0.25981122429083203	0.10901836649290061	170.0911955527363	906985.4499461325	0.02881490910020176	0.07117954924250836	1.7508481157574956e-07	6.756751526874528	0.15161939269016655	
LRPQSAQSSFPPS(ph)PGPSPDVQLATLAQR	ddPTM_K562_Methotrexat_30min_R1	4	LRPQSAQSSFPPSPGPSPDVQLATLAQR	28	1	Q9Y679-3;Q9Y679	Q9Y679-3	AUP1	Ancient ubiquitous protein 1	1	LRPQS(0.023)AQS(0.023)S(0.023)FPPS(0.895)PGPS(0.028)PDVQLAT(0.007)LAQR;LRPQSAQSSFPPS(0.948)PGPS(0.051)PDVQLAT(0.001)LAQR;LRPQSAQSSFPPS(0.993)PGPS(0.007)PDVQLATLAQR;LRPQSAQSSFPPS(0.997)PGPS(0.002)PDVQLATLAQR	104.25	2.3374000000000004e-11	67204000.0	3156.46	1953.8200000000002	2977.5	2613.7299999999996	2026.4	2306.42	1992.0400000000002	3098.7599999999998	3408.94	4144.81	True	False	3017.7057978384883	2276.655545738399	2352.5634399450164	2384.588348977615	2292.907118595552	2752.1030227522338	2438.8056786849456	2989.7748544061114	3250.459123464249	3394.144744969919	0.8890916636100129	0.6707597102664448	0.6931240759344417	0.702559415744289	0.6755478304199055	0.8108384378217272	0.718533198178783	0.8808625085411933	0.9576666193394933	1.0	11.728832375293269	-9.51436118650975	1.6390322065273806	0.9987511479763426	0.7280199436249788	0.6986711918746871	0.06476437039712009	0.20540644355844612	0.9818166150965404	0.0562786296843583	0.0184816073764443	3.059417971625958e-10	9.51436118650975	-0.2707312043513638	
LRQDLQDR	ddPTM_K562_Methotrexat_30min_R1	1	LRQDLQDR	8	1	P12270	P12270	TPR	Nucleoprotein TPR	0		120.87	0.015614	7309700.0	1799.7	1534.3	1972.2	1822.8	1581.5	1993.9	1458.7	1709.1	1994.0	2013.2	False	True	1720.5873428999344	1787.8169963591445	1558.26217170766	1662.9979540795712	1789.4949704198903	2379.1929557780786	1785.8506071653842	1648.989984272899	1901.2993752274058	1648.5899716931397	1.0436720909644086	1.0844521846284285	0.9452090565049895	1.0087395790547204	1.085470008398776	1.4431684024709874	1.083259414304986	1.0002426392169232	1.1532882086348784	1.0	10.687016908809294	-7.999866919624584	24.999244891726768	1.1473342349886297	1.0231305644694253	0.16603958585267653	0.1206081915619978	8.596050715164834	1614209.658242488	0.03935226883180095	0.04416858306894171	1.0003064758427298e-08	7.999866919624584	-0.12420367051920445	
LRQHHDEYEDEIR	ddPTM_K562_Methotrexat_30min_R1	2	LRQHHDEYEDEIR	13	1	O75976-2;O75976	O75976-2	CPD	Carboxypeptidase D	0	;	120.57	0.0038529000000000002	13759900.0	4806.799999999999	3592.9	4563.1	5105.2	4539.1	3870.0	3631.3	5495.9	5289.3	5815.2	False	True	4595.498827499808	4186.5656561420665	3605.3676684510847	4657.635042334338	5136.071211023027	4617.822728753278	4445.711462123574	5302.606081894223	5043.401597487619	4762.010929559879	0.9650332381585985	0.8791591867532743	0.7571103304427538	0.9780815523589764	1.0785509077984665	0.969721152903795	0.9335785927174388	1.1135224509836033	1.0590907228248945	1.0	12.217355216484895	-7.505967187620879	22.184738575762978	1.0244021244864778	0.8681881808976537	0.5239115505570249	0.06763861721603616	136.08911234134712	178522.4055243598	0.020013326122044244	0.02878593330459163	3.119125235380853e-08	7.505967187620879	-0.15621394358882412	
LRRPS(ph)PPEPWDEEDGASCSTFFGSEER	ddPTM_K562_Methotrexat_30min_R1	1	LRRPSPPEPWDEEDGASCSTFFGSEER	27	2	A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6	A0A0J9YX88	PHRF1	PHD and RING finger domain-containing protein 1	1	LRRPS(0.999)PPEPWDEEDGASCSTFFGSEER	79.021	0.0015632999999999999	85225000.0	1162.8	953.36	1196.2	1066.3	801.26	822.18	753.42	1108.6	1196.8	1066.1	True	False	1111.6847042974066	1110.886535650755	945.1339670402111	972.819134537551	906.6397344284799	981.0546488698636	922.393613800331	1069.6099096395378	1141.1610292237506	873.0189592797819	1.273379796029307	1.2724655333570392	1.0826041714144699	1.1143161602585374	1.0385109335728908	1.1237495342360129	1.0565562225146654	1.225185201615711	1.3071434670389963	1.0	9.76986917485729	-6.752105075679201	24.76544167588031	1.1215183978371615	1.2729227774486362	0.34387891559543926	0.08523620726742463	205.33429024632872	544773.0030639127	0.022610984445731442	0.058084714383422026	1.7696807398844782e-07	6.752105075679201	0.1514043796114748	
LRS(ph)PPEALVQGR	ddPTM_K562_Methotrexat_30min_R1	1	LRSPPEALVQGR	12	1	Q9UHB6;F8VRN8;Q9UHB6-4	Q9UHB6	LIMA1	LIM domain and actin-binding protein 1	1	LRS(1)PPEALVQGR	112.62	0.00091698	17874000.0	1291.7	1353.9	1743.1	1281.8	1339.4	1331.9	1202.1	1094.6	1361.3	1383.1	True	False	1234.9184146379084	1577.6089626348473	1377.2471308709166	1169.426584122885	1515.554576908252	1589.2708249164077	1471.7015252440574	1056.102297574814	1298.0134601289205	1132.6071874869765	1.0903324897468996	1.3929003630422288	1.2159971666140899	1.0325085316804348	1.3381113890606304	1.4031968386521319	1.2993927122336755	0.9324524064853312	1.146040281634577	1.0	10.145431874923295	-9.252828549489495	24.925221161680362	1.0294347559850487	1.2576935728890002	0.41558488627133894	0.1232815445935464	592.6190464458191	1715422.2411133521	0.06061730869008967	0.034291304877547925	5.586907107841922e-10	9.252828549489495	0.22825881690395144	
LRT(ph)STSDLSRGEIGDPQTENPSTR	ddPTM_K562_Methotrexat_30min_R1	1	LRTSTSDLSRGEIGDPQTENPSTR	24	2	A0A087WW76;A0A452Q6Z5;Q5T5U3	A0A087WW76	ARHGAP21	Rho GTPase-activating protein 21	1	LRT(0.409)S(0.409)T(0.08)S(0.08)DLS(0.023)RGEIGDPQTENPSTR	84.689	0.00046354	54265000.0	1390.7	1188.4	1118.7	1749.7	842.13	952.97	1165.4	1091.8	1064.0	1608.4	True	False	1329.5664931771616	1384.7629006538527	883.9001579400465	1596.3065175845004	952.8848557949428	1137.1179653281686	1426.7706160214843	1053.4007751618692	1014.5348722376925	1317.1031742853406	1.009462674705483	1.0513701034888359	0.6710940913339232	1.2119828945448068	0.7234701687754853	0.8633476765745159	1.0832641237810767	0.7997860727451696	0.7702774483010251	1.0	10.363152647112754														
LRVQS(ph)PEPPAPER	ddPTM_K562_Methotrexat_30min_R1	4	LRVQSPEPPAPER	13	1	A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160-2;Q14160;Q14160-3;H0YCG0	A0A0G2JMS7	SCRIB	Protein scribble homolog	1	LRVQS(1)PEPPAPER;LRVQS(1)PEPPAPER;LRVQS(1)PEPPAPER;LRVQS(1)PEPPAPER	121.03	0.00085339	416621000.0	4069.5	3567.2200000000003	4005.2	4068.1400000000003	3503.6000000000004	2963.92	2844.7799999999997	3366.52	3145.5699999999997	3827.1899999999996	True	False	3890.609652681714	4156.642472627431	3164.563254296482	3711.4924823948177	3964.384810852437	3536.6555923014034	3482.794330741031	3248.117583438298	2999.3331372788734	3134.048804770647	1.2414004679057424	1.3262851766380257	1.009736430868398	1.184248463758824	1.264940356007811	1.128462194627572	1.1112763545479967	1.0363966184872473	0.9570154532096917	1.0	11.613811930921958	-9.082531735033635	1.3002597497292656	0.9776382353263782	1.1993664519541587	0.5608281776422857	0.07906138801291734	0.3723419310477871	1.1663640181067099	0.06354629357483087	0.02771886892563586	8.269290804894995e-10	9.082531735033635	0.22172821662778053	
LS(ph)ADVDPLS(ph)LQMDMLS(ph)LS(ph)SQTPSLNR	ddPTM_K562_Methotrexat_30min_R1	1	LSADVDPLSLQMDMLSLSSQTPSLNR	26	0	Q7Z3G6;A0A1X7SBR1	Q7Z3G6	PRICKLE2	Prickle-like protein 2	4	LS(0.999)ADVDPLS(0.991)LQMDMLS(0.853)LS(0.53)S(0.53)QT(0.049)PS(0.049)LNR	43.176	0.020127000000000003	10613000.0	215.07	142.31	212.54	233.43	179.96	142.71	153.4	100.08	220.94	190.97	True	False	205.61578031754672	165.82430864359634	167.9307585309533	212.96555432345536	203.62789432612286	170.28668775720433	187.80385489762796	96.56012967411601	210.6685476242442	156.38348246286455	1.3148177613091143	1.0603697144484145	1.0738394866659324	1.3618161647859903	1.302106150337694	1.0889045638029022	1.2009187411606888	0.6174573436618894	1.347127869941574	1.0	7.288944330122402														
LS(ph)ALTQS(ph)LT(ph)RVRQAPT(ph)ASGAT(ph)IR	ddPTM_K562_Methotrexat_30min_R1	1	LSALTQSLTRVRQAPTASGATIR	23	2	Q8N7S6	Q8N7S6	ARIH2OS	Uncharacterized protein ARIH2OS	5	LS(0.926)ALT(0.315)QS(0.794)LT(0.963)RVRQAPT(0.789)AS(0.3)GAT(0.915)IR	42.618	0.026733999999999997	12043000.0	653.86	543.51	788.33	818.23	709.7	506.19	681.91	623.77	698.23	828.2	True	False	625.1170973098579	633.3157894096063	622.8703061668696	746.4970462840295	803.0379895712905	604.0040535058456	834.8456759663716	601.8316555437982	665.7694397016206	678.2049545779149	0.9217229881472974	0.9338118000092676	0.9184101383548824	1.100695359485565	1.1840638794375458	0.8905922161564733	1.230963693690417	0.8873890576608245	0.9816640754504166	1.0	9.405577513682271	-7.244518907156214	24.046887024994184	1.0424630699737876	0.9255646308353808	0.19782851405835955	0.1056979542125164	816.5303868247947	1160426.0845386256	0.02827440292378957	0.048794002744599024	5.6948343093570375e-08	7.244518907156214	-0.1168984391384068	
LS(ph)DGSHCPIILCGDLNSVPDSPLYNFIR	ddPTM_K562_Methotrexat_30min_R1	1	LSDGSHCPIILCGDLNSVPDSPLYNFIR	28	0	Q9UNK9	Q9UNK9	ANGEL1	Protein angel homolog 1	1	LS(0.789)DGS(0.211)HCPIILCGDLNSVPDSPLYNFIR	45.305	0.014355000000000001	17373000.0	904.53	1064.4	1153.6	1092.2	1031.1	1272.8	1298.8	1122.4	1118.5	1197.7	True	False	864.7679442536405	1240.2740082934718	911.475124876766	996.448521749895	1166.7077230477062	1518.7505863455237	1590.088961805991	1082.9245558176242	1066.501179133326	980.784924049709	0.8817100702190357	1.2645728720750717	0.9293323159100372	1.0159704715234714	1.1895653108433935	1.5485052319875883	1.6212412352755543	1.1041407032911716	1.0873955675518445	1.0	9.93779299285941	-7.941523283120032	4.813435204126366	1.3074274530732253	1.036498127360461	0.23368414925684	0.20728532012150747	0.29328308200467373	13.96637241973531	0.06893875653713333	0.07787319834318293	1.1441335396118136e-08	7.941523283120032	-0.2709293257127643	
LS(ph)LTDPLVAER	ddPTM_K562_Methotrexat_30min_R1	2	LSLTDPLVAER	11	0	P13224;P13224-2	P13224	GP1BB	Platelet glycoprotein Ib beta chain	1	LS(0.999)LT(0.001)DPLVAER;LS(1)LTDPLVAER	154.67	6.5474e-08	24365000.0	1305.3000000000002	902.11	1544.1399999999999	1249.03	1175.8400000000001	1027.84	953.7	1463.77	1185.46	1558.12	True	False	1247.920574922089	1051.1683442518079	1220.0461159216443	1139.529479144178	1330.4835700401657	1226.455533209761	1167.5915020591124	1412.288379427266	1130.3482233485856	1275.9293695085018	0.9780483189306928	0.8238452451774241	0.9562019223615926	0.8930976168243026	1.0427564423512554	0.9612252547193905	0.9150910151937939	1.1068703434354603	0.8859018769855613	1.0	10.317332753984216	-7.741007771847591	24.999682176331543	0.9859360819480907	0.9095447282458882	0.20698461510321042	0.06940640439463518	362.36764847326367	443383.77486002725	0.019307012771794578	0.02489580076204941	1.815483173793036e-08	7.741007771847591	-0.07639135370220251	
LS(ph)PEVAPPAHR	ddPTM_K562_Methotrexat_30min_R1	3	LSPEVAPPAHR	11	0	Q8TAD8	Q8TAD8	SNIP1	Smad nuclear-interacting protein 1	1	LS(1)PEVAPPAHR;LS(1)PEVAPPAHR;LS(1)PEVAPPAHR	89.62899999999999	0.012582	38965100.0	9721.25	8178.81	12655.099999999999	10233.2	9570.3	8934.6	8040.599999999999	10767.2	10427.3	11346.300000000001	True	False	9293.915489896088	9530.219336500126	9998.967452174022	9336.071244067956	10828.962197539973	10661.085000599245	9843.909228747507	10388.511473092945	9942.537098951214	9291.37512210505	1.0002734113904188	1.0257060135078222	1.0761558241670324	1.004810495903515	1.1654854157999563	1.1474173478622693	1.0594674199869432	1.1180811598465878	1.0700824117300989	1.0	13.181676415718586	-7.018325336273425	1.2103884488060652	1.0950669475440942	1.0053745122733544	0.21687607705359624	0.05117328103056844	0.8006096811239521	2.058327562529563	0.017157100873773975	0.06498440424739338	9.586821997636664e-08	7.018325336273425	-0.08969243527073978	
LS(ph)PGESAYQK	ddPTM_K562_Methotrexat_30min_R1	1	LSPGESAYQK	10	0	A0A0G2JHC2;Q6NYC8;Q6NYC8-2	A0A0G2JHC2	PPP1R18	Phostensin	1	LS(0.975)PGES(0.024)AYQK	88.155	0.016616	18776000.0	2765.5	1808.0	3867.6	3382.7	2233.6	1880.5	1937.0	2406.8	2479.6	3538.5	True	False	2643.9319313162027	2106.7412692546004	3055.843613881224	3086.1439429805623	2527.3575503824623	2243.880010702982	2371.421557605639	2322.1514798127746	2364.323937218592	2897.643361233944	0.9124421475354718	0.7270533349409354	1.0545961779712987	1.0650530649383805	0.8722113922626429	0.7743810162156876	0.8183966285608674	0.8013931289404437	0.8159471827519034	1.0	11.500664325160374	-7.993445110168794	24.993768323906682	0.8275964359401168	0.9372717636287223	0.1579806981857652	0.10409764714489164	291.46135156112257	1111330.6201369083	0.03361111437323697	0.03801920743714531	1.0152076690462194e-08	7.993445110168794	0.10967532768860555	
LS(ph)PGSYPTVIQQQNATSQR	ddPTM_K562_Methotrexat_30min_R1	2	LSPGSYPTVIQQQNATSQR	19	0	Q13469-3;Q13469-4;Q13469-2;Q13469;Q13469-5	Q13469-3	NFATC2	Nuclear factor of activated T-cells, cytoplasmic 2	1	LS(0.999)PGS(0.001)YPTVIQQQNATSQR;LS(0.994)PGS(0.006)YPTVIQQQNATSQR	230.27	1.3647e-45	54651000.0	1701.94	1229.6100000000001	1688.58	1715.99	1443.3000000000002	1107.79	1396.8200000000002	1599.76	2100.0	1897.36	True	False	1627.1247554454155	1432.782152703622	1334.1701338110342	1565.5518209463485	1633.1192480600864	1321.8547391952447	1710.0924419693906	1543.4955340474	2002.3714583638678	1553.72971820569	1.0472379696286462	0.9221566247431097	0.858688688372253	1.0076088541025727	1.0510961005148816	0.8507623454108711	1.1006370168064203	0.9934131502806622	1.288751470028061	1.0	10.60151984367272	-9.132215943581421	1.9188179474928457	1.1206222676213908	0.9589070939204207	0.2742624279533512	0.10268891155403993	0.4401453680138087	3.089677806418494	0.06527755946306923	0.029696858132868133	7.375374143398187e-10	9.132215943581421	-0.1617151737009701	
LS(ph)SPVLHR	ddPTM_K562_Methotrexat_30min_R1	4	LSSPVLHR	8	0	Q16643;Q16643-2;Q16643-3;D6RCR4;D6R9W4	Q16643	DBN1	Drebrin	1	LS(0.5)S(0.5)PVLHR;LS(0.627)S(0.373)PVLHR;LS(0.643)S(0.357)PVLHR;LS(0.562)S(0.438)PVLHR	106.88	0.0091815	1394525000.0	25698.300000000003	22405.5	30242.6	27087.3	20976.3	19516.3	20166.8	23676.2	24337.9	25788.6	True	False	24568.633502275592	26107.628046617232	23895.091549582252	24712.59846474632	23735.051121099426	23287.548765159612	24689.718259123103	22843.494626202104	23206.436341197124	21118.034643356703	1.1633958328600609	1.2362716743070667	1.1315016739542643	1.170212990086196	1.123923296932652	1.102732766492804	1.1691295461952458	1.0817055190970717	1.098891858693744	1.0	14.366187955618072	-15.999999995926121	0.04817503153655854	0.3503976235325425	1.4702027347914872	0.7275381444185594	0.03153135305630666	289.72423463639393	1.031929709414274	24.252386833202625	5.712432586360994	1.0000000093804531e-16	15.999999995926121	1.1198051112589447	
LS(ph)SSWESLQPEPSHPY	ddPTM_K562_Methotrexat_30min_R1	1	LSSSWESLQPEPSHPY	16	0	P11277	P11277	SPTB	Spectrin beta chain, erythrocytic	1	LS(0.998)S(0.002)SWESLQPEPSHPY	82.529	0.019551	7537300.0	462.48	347.84	594.32	375.13	388.52	433.21	506.12	445.25	356.98	538.4	True	False	442.1499329579159	405.31464773092944	469.580353863349	342.242935326898	439.6171899510183	516.9217013755065	619.6302936166062	429.59030512989733	340.384077717492	440.890542797331	1.0028564689834225	0.9193090084430431	1.0650724120412947	0.776253745783385	0.9971118617373064	1.1724490575274724	1.4054061801489772	0.974369516760925	0.7720376027071193	1.0	8.78427672092271	-8.007715833335597	24.48749659258901	1.084562440876417	0.9405138802166497	0.10546371889442463	0.16566903404067024	609.7423301458932	1935128.8447863606	0.055958225177612494	0.060795019150698	9.82390528501981e-09	8.007715833335597	-0.14404856065976723	
LSAS(ph)SEDISER	ddPTM_K562_Methotrexat_30min_R1	2	LSASSEDISER	11	0	Q13233	Q13233	MAP3K1	Mitogen-activated protein kinase kinase kinase 1	1	LS(0.001)AS(0.979)S(0.021)EDISER;LS(0.001)AS(0.952)S(0.047)EDISER	153.49	3.7179000000000005e-08	37338000.0	2804.4	2229.2	3049.8	3481.2	2311.0	2717.3	2477.7	2888.1	2793.6000000000004	2995.1	True	False	2681.1219338937462	2597.5374100787344	2409.688657982975	3176.008600911679	2614.9370070441773	3242.3797676592503	3033.38729647883	2786.523886009336	2663.7261457549043	2452.658366887604	1.0931493640086776	1.059070209347982	0.9824803529571234	1.2949249857989795	1.0661643881379628	1.3219858955626966	1.2367753036588478	1.1361239394891363	1.0860567381567874	1.0	11.260130578189973	-7.2449290437545	24.965227941070026	1.174464309857195	1.046317001553426	0.22498424754297297	0.09901497469570127	1117.2129405845744	1689332.7664667305	0.026213139114747343	0.045232847647409806	5.6894587921744554e-08	7.2449290437545	-0.12814730830376897	
LSASS(ph)EDISER	ddPTM_K562_Methotrexat_30min_R1	1	LSASSEDISER	11	0	Q13233	Q13233	MAP3K1	Mitogen-activated protein kinase kinase kinase 1	1	LS(0.002)AS(0.289)S(0.707)EDIS(0.002)ER	116.74	0.002539	22455000.0	430.05	427.24	785.16	569.43	526.88	553.61	423.71	576.32	544.52	525.8	True	False	411.1455169273302	497.8341481616898	620.3656458462567	519.5089559971092	596.17395511529	660.5872973811638	518.7377533159967	556.0504989387144	519.2053840515684	430.572524893827	0.9548809855638438	1.1562143875400517	1.4407924565071355	1.2065538926925554	1.3846075182393442	1.5342068041709238	1.2047627828643037	1.2914212282259034	1.205848850155028	1.0	8.750112452930438	-6.445480025513507	3.6241990728877846	1.3013755043243274	0.9652145841940296	0.3293781359509701	0.14179942089031228	0.2569170104861294	5.992126723570807	0.03495934049664095	0.17075121599270437	3.585254375416147e-07	6.445480025513507	-0.33616092013029775	
LSASTASELS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	LSASTASELSPK	12	0	Q3KQU3-4;Q3KQU3;Q3KQU3-2;H0YF21	Q3KQU3-4	MAP7D1	MAP7 domain-containing protein 1	1	LSAST(0.004)AS(0.168)ELS(0.828)PK;LSASTAS(0.027)ELS(0.973)PK	118.73	0.0013618	60247000.0	3881.2000000000003	2621.6	5165.0	3962.5	2330.66	2680.6	2646.8	3599.7	3453.7	5105.4	True	False	3710.5870952176606	3054.77484041917	4080.937083901261	3615.113777178137	2637.1826416432614	3198.5880120661623	3240.412276030256	3473.096510670619	3293.138240833948	4180.762587662505	0.8875383419684391	0.7306740759290798	0.9761226566522024	0.8647020014593494	0.6307898586314439	0.7650728652962129	0.7750768449738722	0.8307327761016089	0.7876884113324325	1.0	12.029550404263487	-12.483123374043116	6.5052484553519605	1.0000853086332346	0.803481311061139	0.30119970680447494	0.0888908899964461	0.00011362956939237818	9.028394742462702e-06	0.08892379499589687	0.021557865346361164	3.287582242251372e-13	12.483123374043116	-0.19660399757209568	
LSDDFDS(ph)PVKGPLCK	ddPTM_K562_Methotrexat_30min_R1	1	LSDDFDSPVKGPLCK	15	1	Q96T23-3;Q96T23-2;Q96T23;H0YER1;H0YCN2	Q96T23-3	RSF1	Remodeling and spacing factor 1	1	LS(0.076)DDFDS(0.924)PVKGPLCK	71.143	0.032119	0.0	2102.0	1277.3	3102.1	2190.6	1570.1	1461.0	1092.7	1839.9	1965.3	3027.5	True	False	2009.5985968637322	1488.3521146122237	2451.011602704763	1998.5534991259099	1776.595670601497	1743.3175727929047	1337.7657903952932	1775.1896741347518	1873.9336319630997	2479.1904129251843	0.8105866279519115	0.6003379598649401	0.9886338660905141	0.8061315051504361	0.7166031545375737	0.7031801848313752	0.5395978394482698	0.7160360353443826	0.7558651494429002	1.0	11.275653365781446	-5.944762651951366	20.96714215893753	0.7458901212803221	1.7418257226048734	0.005188861132996436	0.1394775789878496	353.02106536504857	992964.3461588863	0.03357839681984481	101737.98629707479	1.1356312845945421e-06	5.944762651951366	0.9959356013245514	
LSDLDSETR	ddPTM_K562_Methotrexat_30min_R1	2	LSDLDSETR	9	0	Q9Y266	Q9Y266	NUDC	Nuclear migration protein nudC	0	;	132.76	0.0072797	31732000.0	5971.3	4970.5	6240.1	5881.5	4943.4	4964.4	4714.5	5573.5	5362.5	6336.1	False	True	5708.8088018327335	5791.790640945794	4930.388286012054	5365.878026617839	5593.543747564771	5923.700039954207	5771.846635690137	5377.476845910128	5113.198545464877	5188.570891935678	1.1002661273657517	1.1162593248841735	0.9502401313770418	1.0341726341173714	1.0780509439041337	1.1416823945030992	1.1124154908745707	1.0364080896086543	0.9854733898715831	1.0	12.341121510907776	-9.549608153395035	4.5513553409914955	0.9953467864588899	1.0740279969878717	0.3030033210668287	0.050613649250814415	0.2867499575907089	14.429383769024774	0.03953220550494725	0.014610781035975736	2.820926993404891e-10	9.549608153395035	0.0786812105289818	
LSDRLGSPVDNLEDMDRDDLT(ph)DDSVFTR	ddPTM_K562_Methotrexat_30min_R1	1	LSDRLGSPVDNLEDMDRDDLTDDSVFTR	28	2	Q5VUA4;Q5VUA4-2	Q5VUA4	ZNF318	Zinc finger protein 318	1	LS(0.021)DRLGS(0.107)PVDNLEDMDRDDLT(0.79)DDS(0.082)VFT(0.001)R	69.528	0.00028147	18412000.0	319.58	512.91	415.85	595.98	549.29	440.83	350.17	472.13	408.31	420.15	True	False	305.5316458542874	597.6596595206734	328.56876792649354	543.7313587186434	621.5312629161814	526.0141585313456	428.7045363070558	455.5249202941683	389.3277572212146	344.05676366325883	0.8880268552235833	1.7370960918112486	0.9549841846680742	1.5803536397000277	1.8064788388363067	1.528858648005465	1.246028509198688	1.3239818785832895	1.1315800133557734	1.0	8.426502795108055	-9.743905039699484	1.3321245416774008	1.0049862419596949	1.422011849969276	0.1765883019106348	0.2848292831598104	0.6923297856746802	2.465133239336784	0.2643383709411261	0.08359813026079098	1.8034120213154698e-10	9.743905039699484	0.4170256080095811	
LSEGS(ph)QPAEEEEDQETPSR	ddPTM_K562_Methotrexat_30min_R1	2	LSEGSQPAEEEEDQETPSR	19	0	S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5	S4R3H4	ACIN1	Apoptotic chromatin condensation inducer in the nucleus	1	LS(0.011)EGS(0.989)QPAEEEEDQETPSR;LSEGS(1)QPAEEEEDQETPSR	310.98	3.802699999999998e-228	58176000.0	3916.9	3426.8999999999996	4448.5	4132.8	3203.0	3522.1	3128.1	3737.0	3629.0	4576.0	True	False	3744.717765963634	3993.1369776596152	3514.82064234942	3770.4838405859423	3624.2506419569427	4202.695977504374	3829.6560528374825	3605.567591848237	3460.2885820964184	3747.2420576533914	0.9993263601200777	1.0656202391580247	0.9379753398024362	1.0062023703232839	0.9671781502758141	1.1215437681483	1.0219932403394567	0.9621923367571632	0.9234227543505237	1.0	11.871613457978144	-9.28386395331123	7.044998463054484	0.956726924397747	1.017639841694528	0.19910950759520019	0.05047914062218811	0.3064493871476829	67.45019267694771	0.02754615727778423	0.01360907373292906	5.201589155162942e-10	9.28386395331123	0.060912917296781055	
LSEGSQPAEEEEDQET(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	2	LSEGSQPAEEEEDQETPSR	19	0	S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5	S4R3H4	ACIN1	Apoptotic chromatin condensation inducer in the nucleus	1	LSEGSQPAEEEEDQET(1)PSR;LSEGSQPAEEEEDQET(0.97)PS(0.03)R	316.88	7.097199999999997e-254	36646000.0	1645.62	1177.67	1611.42	1927.8000000000002	1320.54	1537.9	1320.24	1794.9900000000002	1827.2	2415.1	True	False	1573.280515209751	1372.2599505326684	1273.2049633572456	1758.7927671025882	1494.2141563315085	1835.0774094443593	1616.337427575256	1731.8591842899832	1742.2538708202183	1977.7019872025137	0.7955093969618636	0.6938658905196069	0.6437799888941869	0.8893113211613972	0.7555304924606435	0.9278836858732701	0.8172805802059122	0.875692695611699	0.8809486374055072	1.0	10.949609332611182	-8.305590592892605	0.21569200084424103	1.0264868187965763	0.6164201571800645	0.5657293158590369	0.06808678391488689	3.349711703287886	0.38165918595276055	0.1878306120665073	0.4354600747451749	4.9477689076221375e-09	8.305590592892605	-0.41006666161651184	
LSELHAYILR	ddPTM_K562_Methotrexat_30min_R1	2	LSELHAYILR	10	0	P02008	P02008	HBZ	Hemoglobin subunit zeta	0	;	166.34	2.5353000000000003e-05	78950000.0	17105.8	12858.3	15565.0	13496.599999999999	14583.8	12525.0	12940.400000000001	19229.3	18021.6	18566.5	False	True	16353.849513906598	14982.915521270144	12298.119208310387	12313.37403282332	16501.825323812565	14945.278986468955	15842.614106370695	18552.994619728997	17183.779749547757	15203.92693693656	1.0756332611791501	0.9854635307981198	0.8088778155354867	0.8098811631953516	1.0853659973676195	0.9829880825170737	1.042008039902014	1.2202764915066897	1.1302198320751808	1.0	13.892156376951379	-8.5729914609829	1.3538740584483224	1.125747725822799	0.9315467693640344	0.33005934548182736	0.10072690017390346	0.4751334643479642	1.7744396728362044	0.05897942271797503	0.04078433611208873	2.673058965333437e-09	8.5729914609829	-0.19420095645876467	
LSELLR	ddPTM_K562_Methotrexat_30min_R1	1	LSELLR	6	0	P08238;P07900;P07900-2;A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538	P08238;P07900;A0A669KB10	HSP90AB1;HSP90AA1;GBF1	Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha;Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1	0		119.22	0.013316999999999999	127430000.0	4207.9	3530.2	5175.5	5195.9	4022.8	3223.8	3947.5	4354.1	4392.4	4895.5	False	True	4022.925754397193	4113.505546859841	4089.2332773922526	4740.383514155173	4551.868711353228	3846.753724277731	4832.827361201995	4200.963835072626	4188.198282722594	4008.877511635094	1.0035042833614463	1.0260990850733358	1.020044455218185	1.1824715273532318	1.1354471914250792	0.9595588074500092	1.2055313107411052	1.0479152388368151	1.0447309179607138	1.0	11.968982622316332	-7.053125331243986	24.989824017919894	1.0876128472680067	1.0168687312210993	0.14347574579570488	0.07276226611107108	560.7490100488417	263771.67820167774	0.01938511519786115	0.033576322649925675	8.848602148400692e-08	7.053125331243986	-0.07074411604690733	
LSFASETPLEKEPHS(ph)PADQPEQQAESTLTSAETR	ddPTM_K562_Methotrexat_30min_R1	2	LSFASETPLEKEPHSPADQPEQQAESTLTSAETR	34	1	H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2	H3BSS6	ZNF106	Zinc finger protein 106	1	LSFAS(0.003)ET(0.006)PLEKEPHS(0.991)PADQPEQQAESTLTSAETR;LS(0.004)FAS(0.133)ET(0.049)PLEKEPHS(0.813)PADQPEQQAESTLTSAETR	96.307	3.5026000000000004e-10	138047000.0	4476.1	3629.2	6480.1	4840.8	3787.0	3565.8999999999996	3093.8999999999996	3906.9	3745.2	5481.0	True	False	4279.336003530806	4228.863614147562	5120.015565806112	4416.414579826854	4285.056878267545	4254.959707612747	3787.785832254048	3769.492112548001	3571.0864694592165	4488.337788024091	0.9534344796750926	0.9421892499782735	1.1407375753820226	0.9839755358009941	0.9547090884516432	0.9480034499555602	0.8439172832224714	0.8398414492344728	0.7956367452974884	1.0	12.1319655405484	-8.418749842547337	1.658193618380632	0.8563325927896189	1.0060877174237655	0.3914350566183281	0.0725116088811446	0.3530764930878083	1.938210995729316	0.033482523184487335	0.02707092583473389	3.812853838979063e-09	8.418749842547337	0.14975512463414653	
LSGINEIPRPFS(ph)PPVT(ph)SNTSPPPAAPLAR	ddPTM_K562_Methotrexat_30min_R1	1	LSGINEIPRPFSPPVTSNTSPPPAAPLAR	29	1	Q0JRZ9-3;Q0JRZ9	Q0JRZ9-3	FCHO2	F-BAR domain only protein 2	2	LS(0.002)GINEIPRPFS(0.879)PPVT(0.367)S(0.367)NT(0.367)S(0.019)PPPAAPLAR	58.318999999999996	0.0039271	28991000.0	1872.8	1476.3	1672.2	1937.0	1447.1	1462.6	1694.7	1884.5	1559.8	2169.5	True	False	1790.4739544274025	1720.233482190578	1321.2280719650905	1767.1862173865093	1637.4190146662158	1745.2267501484623	2074.7796147001945	1818.2210668552316	1487.2852384552193	1776.5825271151737	1.007819184923982	0.9682823375415631	0.743690794995327	0.9947110198455446	0.921667859316993	0.9823505092005903	1.1678487112384446	1.0234374362600935	0.8371607936898281	1.0	10.794888992016498	-8.378307495448885	4.549759937859788	1.0167580134896923	0.9232903833047514	0.11824386150376787	0.10114105850436107	0.46539750276489267	15.355933942062345	0.03792079431222562	0.03313543906550976	4.184971498004281e-09	8.378307495448885	-0.09346763018494086	
LSGINEIPRPFS(ph)PPVTSNT(ph)SPPPAAPLAR	ddPTM_K562_Methotrexat_30min_R1	1	LSGINEIPRPFSPPVTSNTSPPPAAPLAR	29	1	Q0JRZ9-3;Q0JRZ9	Q0JRZ9-3	FCHO2	F-BAR domain only protein 2	2	LSGINEIPRPFS(0.684)PPVT(0.243)S(0.243)NT(0.415)S(0.415)PPPAAPLAR	69.528	0.00037686	23971000.0	1502.5	1257.8	1683.9	1635.5	1420.6	1375.8	1312.4	1375.8	1716.9	1857.2	True	False	1436.451899042702	1465.630071055551	1330.4724018550505	1492.1182542775618	1607.4338001760964	1641.6538786095	1606.7391080029126	1327.4123341891368	1637.0816937452012	1520.8430833640473	0.9445102619432143	0.9636957862961331	0.8748255598546669	0.9811125622355811	1.0569359967239444	1.079436725962697	1.0564792157576617	0.8728134734669345	1.0764303771063866	1.0	10.570655591879055	-7.51565090711903	13.255433842428056	1.0215080739259876	0.9307217148615419	0.3402823120257574	0.05985380994195263	0.9333943959427013	1702.7528266572924	0.017854299293236287	0.02439292969366678	3.0503459214986375e-08	7.51565090711903	-0.09078635906444577	
LSGINEIPRPFS(ph)PPVTSNTSPPPAAPLAR	ddPTM_K562_Methotrexat_30min_R1	2	LSGINEIPRPFSPPVTSNTSPPPAAPLAR	29	1	Q0JRZ9-3;Q0JRZ9	Q0JRZ9-3	FCHO2	F-BAR domain only protein 2	1	LSGINEIPRPFS(0.998)PPVT(0.001)SNTSPPPAAPLAR;LS(0.001)GINEIPRPFS(0.941)PPVT(0.039)S(0.015)NT(0.004)SPPPAAPLAR	155.8	1.3997999999999998e-35	124804000.0	3164.9	2461.3999999999996	3261.5	3357.4	2703.8	2941.3	2614.8	3265.2	3028.4	3333.2	True	False	3025.7747855442576	2868.10451335358	2576.955721034648	3063.0619546997796	3059.397092014731	3509.6645974372163	3201.235461449264	3150.361065267023	2887.6103450043515	2729.5251806316182	1.1085352159470045	1.0507704906718955	0.9441040292723494	1.1221958956212963	1.1208532215507092	1.285815064957588	1.1728177062314153	1.1541791545363296	1.0579167268704779	1.0	11.414434291072226	-7.471295133789596	10.469579177220519	1.146873008490345	1.0354997979913159	0.22034440619293083	0.08007132307723716	0.9746539174575732	194.99430670714278	0.022842518671252823	0.033797286688638094	3.3783517530488756e-08	7.471295133789596	-0.11137321049902904	
LSGLAAPDYT(ph)RLSPAK	ddPTM_K562_Methotrexat_30min_R1	1	LSGLAAPDYTRLSPAK	16	1	Q8TEK3;Q8TEK3-1	Q8TEK3	DOT1L	Histone-lysine N-methyltransferase, H3 lysine-79 specific	1	LSGLAAPDYT(0.922)RLS(0.078)PAK	102.38	0.028868	7437200.0	533.14	567.02	826.69	1023.0	719.57	610.59	609.51	535.34	833.67	900.73	True	False	509.70380396381125	660.7104173079333	653.1790663872865	933.3151783099642	814.2060675719506	728.5778759559342	746.2081329768782	516.5117887663994	794.9128636639072	737.599068747845	0.691030975444545	0.8957582042905253	0.8855475746412335	1.2653421321346958	1.1038599451517128	0.9877695171074101	1.011671739558522	0.7002609014179405	1.0777031823174053	1.0	9.526693024075444	-6.410865411587967	1.789984457471542	1.007948998409003	0.6486712825760933	0.3373392863964023	0.13676538256275433	0.8123040019429185	3.35224610312173	0.04038192760986691	0.44738798533630336	3.88270672923173e-07	6.410865411587967	-0.3592777158329098	
LSIVPVRR	ddPTM_K562_Methotrexat_30min_R1	1	LSIVPVRR	8	1	H0YEN5;P15880;I3L404;E9PPT0;E9PM36;E9PMM9	H0YEN5	RPS2	40S ribosomal protein S2	0		93.429	0.023193000000000002	6181800.0	3373.7	2523.4	3237.9	4052.4	3165.8	2575.9	2959.2	4154.8	3867.6	4779.6	False	True	3225.3961875543177	2940.348959533773	2558.309038521568	3697.1323837568907	3582.1581899179805	3073.656218861907	3622.8759283771847	4008.67332903694	3687.7961201752837	3913.968124729054	0.8240731873046608	0.7512449937842351	0.6536356344748382	0.944599512805901	0.9152241601778391	0.7853043563237199	0.9256273461930606	1.0241967234504348	0.9422141424390299	1.0	11.934416291397735	-8.199794747263342	0.5044880631930696	1.0050850646378195	0.73785840629554	0.5229541713223769	0.0776392520996986	0.8924462770352137	0.4825535725232852	0.07361555955733502	0.10249628879229755	6.312556129014158e-09	8.199794747263342	-0.26722665834227954	
LSLEGDHS(ph)TPPSAYGSVK	ddPTM_K562_Methotrexat_30min_R1	1	LSLEGDHSTPPSAYGSVK	18	0	P07355;H0YN42;H0YMU9;H0YMD0;P07355-2;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YNB8;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YKV8;H0YKN4;H0YMD9;H0YMW4	P07355	ANXA2;ANXA2P2	Annexin A2;Annexin;Putative annexin A2-like protein	1	LSLEGDHS(0.792)T(0.207)PPS(0.001)AYGSVK	111.22	0.0011324000000000002	0.0	1017.8	623.39	1253.7	930.57	695.86	695.32	647.5	737.88	926.69	1012.7	True	False	973.0587306793092	726.3946016817617	990.5655028242041	848.9883729031313	787.377786984751	829.6807492911456	792.7183575372495	711.928342165635	883.6083841672441	829.290216736362	1.1733633305222655	0.8759232739299134	1.1944738799916566	1.0237530309284133	0.9494598767647884	1.0004709238658578	0.9558998062909272	0.858479128051697	1.0654995878820916	1.0	9.695733262515155	-7.54559029657168	7.201698522512616	0.9667696339042047	1.0686133415508698	0.21138760938443113	0.0938571874461704	0.2641075020327231	55.93237046727192	0.026295760456937902	0.03459600897884935	2.8471457727795137e-08	7.54559029657168	0.10184370764666517	
LSLEGDHST(ph)PPSAYGSVK	ddPTM_K562_Methotrexat_30min_R1	1	LSLEGDHSTPPSAYGSVK	18	0	P07355;H0YN42;H0YMU9;H0YMD0;P07355-2;A6NMY6;H0YKS4;H0YMM1;H0YKX9;H0YNB8;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YKV8;H0YKN4;H0YMD9;H0YMW4	P07355	ANXA2;ANXA2P2	Annexin A2;Annexin;Putative annexin A2-like protein	1	LSLEGDHS(0.065)T(0.934)PPS(0.001)AYGSVK	87.15700000000001	0.01193	25150000.0	2520.9	2240.2	3799.9	2801.1	1831.6	1627.1	1788.8	2231.9	2051.7	3036.0	True	False	2410.08425444043	2610.3549731107046	3002.352918705983	2555.5319119883084	2072.48750415496	1941.5140470166566	2189.9839350774223	2153.4028119470377	1956.316914821498	2486.150980558501	0.9694038187089574	1.0499583466665816	1.207630969391698	1.027906966219011	0.8336128901107149	0.7809316739808398	0.8808732664278714	0.8661593076150536	0.7868858046513415	1.0	11.279698196615222	-7.685566712094002	4.650389171524071	0.8485258677845723	1.0789583502105613	0.6185942388447991	0.07931080840031611	0.130154130010442	5.213966496774636	0.023803688195325773	0.030646804522927583	2.062686793092009e-08	7.685566712094002	0.23043248242598902	
LSLFSDGDS(ph)SESEDTLSSSER	ddPTM_K562_Methotrexat_30min_R1	1	LSLFSDGDSSESEDTLSSSER	21	0	M0QZ79;M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63	M0QZ79	VRK3	Inactive serine/threonine-protein kinase VRK3	1	LSLFSDGDS(0.849)S(0.141)ES(0.009)EDTLSSSER	150.68	7.3692e-27	0.0	1072.6	798.35	833.26	1052.2	759.5	595.13	788.82	698.3	712.96	1034.7	True	False	1025.4497882949759	930.2637678702496	658.3701131716483	959.9552596458881	859.3875624621604	710.1304497578659	965.7329649305527	673.7403931997918	679.8146452167155	847.3058035520032	1.2102475682288172	1.0979079382797534	0.777015937353061	1.1329501764553547	1.0142590300450074	0.838104078575784	1.1397690903120092	0.7951561176323763	0.802325019334052	1.0	9.726738940494403	-6.534375797044802	22.971888381808338	0.9431299339174889	1.182162788957806	0.3286570874984136	0.12811227665109973	78.49826155560699	156845.4292958581	0.032409149407515464	0.08597722089665456	2.9216231895422304e-07	6.534375797044802	0.23903285504031702	
LSLFSDGDSS(ph)ESEDTLSSSER	ddPTM_K562_Methotrexat_30min_R1	2	LSLFSDGDSSESEDTLSSSER	21	0	M0QZ79;M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63	M0QZ79	VRK3	Inactive serine/threonine-protein kinase VRK3	1	LSLFSDGDS(0.261)S(0.738)ES(0.001)EDTLSSSER;LSLFSDGDS(0.045)S(0.941)ES(0.014)EDTLSSSER	195.25	6.628e-22	47766000.0	4500.2	3962.2000000000003	4819.1	4775.700000000001	3400.8	3382.4	3623.9	3638.0	4050.5	4631.0	True	False	4302.376596387333	4616.886204115365	3807.6367668980783	4357.021795752584	3848.0648089813208	4036.0009296473118	4436.651823751718	3510.0494779619685	3862.1931390965956	3792.2810246924955	1.1345089059522426	1.2174430571082833	1.004049209988816	1.1489184919004998	1.0147098234349203	1.0642673639869764	1.1699164157043116	0.9255773649439885	1.0184353727872182	1.0	11.888850162903449	-3.3501480758906927	0.1792292573453685	0.9739212286307899	1.7308115182773791	0.3135053250227875	0.0731605113327032	59.44492115830264	0.7445294936114973	0.16840499381211424	11.93508584657462	0.00044653131806317244	3.3501480758906927	0.7568902896465892	
LSLT(ph)DPLVAER	ddPTM_K562_Methotrexat_30min_R1	2	LSLTDPLVAER	11	0	P13224;P13224-2	P13224	GP1BB	Platelet glycoprotein Ib beta chain	1	LS(0.001)LT(0.999)DPLVAER;LS(0.004)LT(0.996)DPLVAER	132.5	0.0014379000000000002	14439500.0	2734.1000000000004	2083.5699999999997	2946.6	2849.6000000000004	2385.5	2010.68	2043.85	2733.9	2637.5	3013.2	True	False	2613.9122377189037	2427.8445278654913	2328.14892767153	2599.779992289416	2699.235062874893	2399.2154532944833	2502.2353900424832	2637.7471874107277	2514.88320068319	2467.4802814950176	1.0593447320823834	0.9839367495956193	0.9435329413294974	1.0536173325422644	1.0939236609580758	0.9723341950440335	1.0140852629332495	1.0690043633550528	1.0192110630199045	1.0	11.268822840305049	-7.298804659094154	24.9554706872603	1.033994795764022	0.9944379165076453	0.1325200093909763	0.04205864542969037	1039.800619621222	694457.9057945198	0.012161587679707061	0.01803898178451787	5.025685885445812e-08	7.298804659094154	-0.03955687925637674	
LSMPQSAAVSTT(ph)PPHNRR	ddPTM_K562_Methotrexat_30min_R1	1	LSMPQSAAVSTTPPHNRR	18	1	A2A2F0;Q86X10-4;Q86X10-2;Q86X10-3;Q86X10	A2A2F0	RALGAPB	Ral GTPase-activating protein subunit beta	1	LSMPQSAAVS(0.097)T(0.25)T(0.652)PPHNRR	69.581	0.017796	13817000.0	2400.8	2680.8	3508.6	2972.3	2585.2	3000.7	2576.5	2860.3	2853.5	3527.7	True	False	2295.2637066367524	3123.7566341912243	2772.1928078559467	2711.723073793456	2925.1991132023395	3580.542806762267	3154.3457114976436	2759.701627766527	2720.8414078291894	2888.799345888085	0.794538987245282	1.0813338900251335	0.9596349472322763	0.9387024673947398	1.0126003100097851	1.2394570816622514	1.091922744993534	0.9553109431759892	0.9418589116277782	1.0	11.496254283391337	-7.992974714370162	16.994222274528752	1.054718365745972	0.9571792760414111	0.1766985696960266	0.10165599109519989	6.820241625870668	16486.236233761665	0.03319624128949527	0.03734419013647959	1.0163078629440231e-08	7.992974714370162	-0.09753908970456093	
LSMS(ph)LMEQLLK	ddPTM_K562_Methotrexat_30min_R1	1	LSMSLMEQLLK	11	0	Q5SRE5-2;Q5SRE5	Q5SRE5-2	NUP188	Nucleoporin NUP188 homolog	1	LSMS(1)LMEQLLK	74.392	0.020621	50691000.0	3131.5	3227.1	3692.0	3823.0	3419.8	3507.1	3656.4	3815.6	3520.3	3173.9	True	False	2993.843009552228	3760.323423678938	2917.099654165238	3487.8435255904133	3869.5636420119745	4184.797439796029	4476.440776060539	3681.4031852973344	3356.64202137063	2599.07595428018	1.1518874639357661	1.4467924330900779	1.1223602947660432	1.3419552129081118	1.4888228393785663	1.610109713378891	1.7223201071475802	1.416427703559324	1.2914751551769326	1.0	11.343783079788935	-6.255552106833093	23.215222635082775	1.4069620722299727	1.151887160965277	0.09278032889353927	0.20329198894556	556.64620305184	2194833.3883187138	0.05235362211970082	0.4426371794671159	5.551980002356281e-07	6.255552106833093	-0.2550749112646957	
LSPERS(ph)SDSESNENEPHLPHGVSQR	ddPTM_K562_Methotrexat_30min_R1	1	LSPERSSDSESNENEPHLPHGVSQR	25	1	V9GYS7;E7ES68;G5E9D5;Q9BQ52-2;Q9BQ52	V9GYS7	ELAC2	Zinc phosphodiesterase ELAC protein 2	1	LS(0.091)PERS(0.375)S(0.375)DS(0.127)ES(0.032)NENEPHLPHGVSQR	83.647	0.00047311	24159000.0	519.18	334.55	468.97	393.42	400.0	315.73	330.07	372.53	344.65	512.5	True	False	496.3574688485787	389.8287011223047	370.5396058542449	358.92947942395483	452.6070111716447	376.7403540437401	404.09659964837056	359.4279087479861	328.6272967262413	419.6812837734625	1.1827009877250205	0.9288684442090305	0.8829071492600954	0.8552429982026538	1.0784541238106653	0.8976820473297512	0.9628654297257051	0.8564306359251412	0.7830401531644886	1.0	8.713150315592564	-9.258532968261099	22.815718398359596	0.8648015326890375	0.9618968670259814	0.12602804675720325	0.1049778345073754	146.55709240278682	1150527.1694666084	0.05143483651860957	0.027963028970565164	5.51400342765197e-10	9.258532968261099	0.09709533433694395	
LSPLPPGS(ph)PGSAAR	ddPTM_K562_Methotrexat_30min_R1	2	LSPLPPGSPGSAAR	14	0	Q6ZN18-2;Q6ZN18	Q6ZN18-2	AEBP2	Zinc finger protein AEBP2	1	LSPLPPGS(0.978)PGS(0.022)AAR;LSPLPPGS(0.895)PGS(0.105)AAR	142.54	5.415199999999999e-06	21160400.0	2711.6	2934.2	3565.9	3515.8999999999996	2803.1	2799.6	2802.6000000000004	3248.1000000000004	3422.6	3234.6	True	False	2592.401310778163	3419.0266771276833	2817.4663209067785	3207.666505786904	3171.7567825380897	3340.5830778857066	3431.154392021462	3133.8624819593933	3263.4840730457977	2648.782596085154	0.9787142646624447	1.2907917328439615	1.0636834918316571	1.2109965198834245	1.1974394528361372	1.2611767695933291	1.2953703324284285	1.1831331444834987	1.2320694336595082	1.0	11.371113721264647	-6.24605084856081	24.394874501010122	1.2004931961562955	0.978714036897263	0.3338809935438015	0.09009466804400829	2258.4408674134756	3580144.67209763	0.0211734724964218	0.4822180177331992	5.674781593950513e-07	6.24605084856081	-0.22177915925903247	
LSPPAGLFTSARGSLS(ph)	ddPTM_K562_Methotrexat_30min_R1	1	LSPPAGLFTSARGSLS	16	1	K7EK35;P42229-2;P42229	K7EK35	STAT5A	Signal transducer and activator of transcription;Signal transducer and activator of transcription 5A	1	LSPPAGLFT(0.002)S(0.011)ARGS(0.422)LS(0.565)	105.53	0.0027087	12965000.0	572.68	532.46	592.83	791.68	496.61	396.65	501.75	681.13	590.17	854.24	True	False	547.5056729076705	620.4399647274918	468.4030845012943	722.2746435624948	561.9229195448761	473.2969988010308	614.2802098753897	657.1742718318409	562.7331255155256	699.5288582451558	0.7826777501090492	0.8869397701246134	0.6695979429302379	1.032515864140901	0.8032876884515112	0.6765939578080421	0.8781341936576833	0.9394526960337762	0.8044459051013317	1.0	9.450239765089542	-11.094475813519624	0.43995532538047527	1.0255391169229218	0.8173749436064884	0.19589497625571528	0.10507485211098956	8.37476286621126	1.9774298295292667	0.47782335047369273	0.0632818545023708	8.044965508672447e-12	11.094475813519624	-0.20816417331643333	
LSPPSSSAASSYS(ph)FSDLNSTR	ddPTM_K562_Methotrexat_30min_R1	1	LSPPSSSAASSYSFSDLNSTR	21	0	P50402	P50402	EMD	Emerin	1	LSPPSSSAAS(0.033)S(0.072)YS(0.738)FS(0.157)DLNS(0.001)T(0.001)R	97.49	0.0016707	0.0	387.65	583.45	667.58	728.67	641.47	476.11	312.43	453.74	642.58	679.46	True	False	370.609370159004	679.8551955456836	527.4640810204847	664.7886324331586	725.8345486406872	568.1115192213762	382.5003806105988	437.78170701771967	612.706596054978	556.4032098979836	0.6660805753204679	1.2218750421485434	0.9479889253643866	1.1947965443172899	1.3045117923992005	1.021042850068279	0.6874517864135438	0.7868065806054333	1.1011916990330046	1.0	9.11998693260697	-8.53756897358217	24.91035160899845	0.8729750376236147	1.0847986996347476	0.14346727701295092	0.19577209707855683	373.8550458730284	633943.4160110456	0.07401657536644698	0.05735454181278392	2.9002205562147406e-09	8.53756897358217	0.2118236620111329	
LSPPYS(ph)SPQEFAQDVGR	ddPTM_K562_Methotrexat_30min_R1	1	LSPPYSSPQEFAQDVGR	17	0	Q13263;Q13263-2;M0R0K9	Q13263	TRIM28	Transcription intermediary factor 1-beta	1	LSPPYS(0.5)S(0.5)PQEFAQDVGR	110.32	0.00093081	46517000.0	967.88	1171.1	1260.1	1036.5	925.46	1066.8	1154.9	1262.5	938.89	1092.3	True	False	925.3331541067887	1364.6043697035734	995.6222302853778	945.631654270066	1047.1742113972748	1272.944001817571	1413.9157237370964	1218.0971594081875	895.2412088301203	894.4738853965906	1.034499910186328	1.5255944214609876	1.1130813839734852	1.0571931385685933	1.1707152422152383	1.4231203644958006	1.5807233132470897	1.3618029316396523	1.0008578488942574	1.0	9.804895552478063	-9.770563873351724	24.687376515213153	1.0004285934673338	1.2890206657530026	0.28050878895046616	0.1810562302259127	253.48201379124401	685795.1181271423	0.17603233738742596	0.048115724909538395	1.696040140800771e-10	9.770563873351724	0.28859207228566874	
LSPS(ph)PTSQR	ddPTM_K562_Methotrexat_30min_R1	4	LSPSPTSQR	9	0	P02545-3;P02545;P02545-5;P02545-4;P02545-6;A0A0C4DGC5;Q3BDU5;P02545-2;Q5TCI8	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	1	LSPS(0.998)PT(0.001)SQR;LS(0.074)PS(0.915)PT(0.011)SQR;LSPS(0.964)PT(0.009)S(0.026)QR;LS(0.01)PS(0.98)PT(0.009)SQR	149.94	1.1943e-07	275423000.0	7587.0	6228.0	9673.7	8503.5	6374.7	6199.300000000001	5495.4	7520.399999999999	7239.999999999999	8147.5	True	False	7253.484564417292	7257.0711421004735	7643.322568932357	7758.011357535459	7213.084785289709	7397.226987689978	6727.883339011891	7255.903269396702	6903.413980263999	6671.908799110797	1.0871678230050155	1.087705386960275	1.145597579204174	1.1627873808121316	1.081112617464291	1.1087122456883476	1.0083895840885226	1.0875303436947066	1.0346984930585466	1.0	12.703883852825681	-8.704006648347034	8.737434620953602	1.040029432243975	1.1136657583829541	0.581087662607527	0.03283002732056623	0.2367007732797312	33.10942705958655	0.012990586372226602	0.010023504016832841	1.9769393761315692e-09	8.704006648347034	0.07363632613897919	
LSQMQS(ph)PIPLTETR	ddPTM_K562_Methotrexat_30min_R1	3	LSQMQSPIPLTETR	14	0	H3BSW6;Q2VPK5-3;Q2VPK5;Q2VPK5-5	H3BSW6	CTU2	Cytoplasmic tRNA 2-thiolation protein 2	1	LS(0.001)QMQS(0.993)PIPLT(0.006)ETR;LS(0.001)QMQS(0.969)PIPLT(0.03)ETR;LSQMQS(1)PIPLTETR	140.49	1.0619000000000001e-05	270764000.0	9120.300000000001	7267.999999999999	9801.5	9495.6	7967.4	7924.0	8082.2	9191.6	8358.8	9691.0	True	False	8719.382532338877	8468.91346512303	7744.299095422695	8663.13549087008	9015.252752022407	9455.200853395605	9894.839087702789	8868.32621815152	7970.201212462809	7935.865992289996	1.0987310699059307	1.0671694145731432	0.9758606184815349	1.0916433693924084	1.1360137331932114	1.1914516780628228	1.2468505765238491	1.1174994924016415	1.0043265876976968	1.0	12.954171948757466	-7.523483767020292	6.329155186810466	1.1309261441937783	1.0465967739315603	0.12151092101106975	0.07657541664612656	0.2506804852849521	45.9300106171436	0.023311606562522534	0.031854026855148244	2.9958235676806345e-08	7.523483767020292	-0.0843293702622181	
LSQNSMHSSPASSNYQQTT(ph)ISHSPSSR	ddPTM_K562_Methotrexat_30min_R1	1	LSQNSMHSSPASSNYQQTTISHSPSSR	27	0	A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79	A0A590UJS4;Q6KC79	NIPBL	Nipped-B-like protein	1	LSQNSMHSSPASSNYQQT(0.189)T(0.598)IS(0.113)HS(0.08)PS(0.017)S(0.004)R	124.48	7.475599999999999e-14	11275000.0	758.48	633.05	792.92	799.75	659.88	554.57	619.38	832.32	805.15	957.24	True	False	725.1381273783088	737.6507524898365	626.4969278929309	729.6371591919782	746.6657863298618	661.7328037944983	758.2917317242031	803.0468338365332	767.7187522388898	783.8745601547491	0.9250690917117596	0.9410316267238124	0.7992311011716602	0.9308085710141383	0.9525322344718755	0.8441820125708147	0.9673636194731265	1.0244583440467812	0.97938980452093	1.0	9.61447899472501	-8.95722074292624	7.163846520391906	1.000481524180071	0.9002435004065722	0.5202906014274641	0.04508193564226696	0.1649876858076822	21.8783646818645	0.01924458602537773	0.012847261856568802	1.103517582109284e-09	8.95722074292624	-0.10023802377349889	
LSQNSMHSSPASSNYQQTTIS(ph)HSPSSR	ddPTM_K562_Methotrexat_30min_R1	1	LSQNSMHSSPASSNYQQTTISHSPSSR	27	0	A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79	A0A590UJS4;Q6KC79	NIPBL	Nipped-B-like protein	1	LSQNSMHSSPAS(0.001)SNYQQT(0.121)T(0.346)IS(0.445)HS(0.083)PS(0.003)S(0.001)R	167.86	1.4969e-67	0.0	573.66	467.91	565.47	324.51	437.06	399.44	383.83	487.67	410.57	586.72	True	False	548.4425932810893	545.2241743898892	446.78557460477174	296.0607121342778	494.5410507566974	476.62612681478305	469.9136481444362	470.5183696860125	391.48269031450144	480.4593225669577	1.1414964129552452	1.1347977836644136	0.929913425797887	0.6162034915932311	1.0293088874090424	0.9920218100219286	0.9780508485792742	0.9793094807114293	0.8148092292661127	1.0	8.908270482136697	-6.768566490575896	6.316163532081196	0.9141921609582396	1.140178729556663	0.3685111363342447	0.11564439986737989	0.14784141861331776	24.26423007716537	0.031320564861818063	0.07335860957482501	1.7038584382627697e-07	6.768566490575896	0.22598656859842337	
LSQNSMHSSPASSNYQQTTISHS(ph)PSSR	ddPTM_K562_Methotrexat_30min_R1	1	LSQNSMHSSPASSNYQQTTISHSPSSR	27	0	A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79	A0A590UJS4;Q6KC79	NIPBL	Nipped-B-like protein	1	LSQNSMHSSPASSNYQQT(0.06)T(0.184)IS(0.07)HS(0.652)PS(0.028)S(0.006)R	155.46	4.8057e-34	14999000.0	958.61	861.56	1179.2	1044.6	928.02	737.42	724.07	1008.8	1267.7	1229.3	True	False	916.470652207204	1003.9181459839559	931.7020347214648	953.0215398461273	1050.070896268774	879.9159784592363	886.4611291768286	973.319932206717	1208.7649036989885	1006.6618578394485	0.9104056591298515	0.9972744454017745	0.9255362438397472	0.946714661357641	1.043121767345484	0.8740928958486208	0.8805947322563694	0.9668787236020924	1.2007655741455272	1.0	9.975363441748486	-9.618617889033242	7.814112305524678	1.0987499583933469	0.9417476835086169	0.48216018509125935	0.0656817495977061	0.19359584760675616	13.760903597170309	0.04344365523835178	0.016206730238531083	2.406479192734423e-10	9.618617889033242	-0.15700227488472995	
LSQNSVNLS(ph)PSSHANNLSVVTYSK	ddPTM_K562_Methotrexat_30min_R1	1	LSQNSVNLSPSSHANNLSVVTYSK	24	0	Q5TH58;Q9H6K1-2;Q9H6K1	Q5TH58	C6orf106	Uncharacterized protein C6orf106	1	LS(0.001)QNS(0.008)VNLS(0.446)PS(0.228)S(0.314)HANNLS(0.002)VVT(0.001)YS(0.001)K	65.782	0.0032134999999999998	26537000.0	3750.0	2533.5	4395.0	3815.6	2805.9	2478.6	2411.8	3218.8	3853.9	4707.4	True	False	3585.154490123214	2952.1178128631245	3472.5495612286627	3481.092272101173	3174.925031616293	2957.554370927101	2952.7075439511	3105.5929795667926	3674.7330301850066	3854.8442443613567	0.930038741608658	0.7658202577656184	0.9008274630831343	0.9030435606297488	0.8236195369658293	0.7672305762426693	0.7659732421796678	0.8056338421739022	0.9532766558753167	1.0	11.912456853641027	-9.880699406618511	4.373527878640509	0.9972914990776931	0.8306190806051844	0.5035684635610762	0.05780035223694949	0.17078190630370302	5.23178173977442	0.05802991824009865	0.015283340543748759	1.3161354694353578e-10	9.880699406618511	-0.1666724184725087	
LSQNSVNLSPSS(ph)HANNLSVVTYSK	ddPTM_K562_Methotrexat_30min_R1	1	LSQNSVNLSPSSHANNLSVVTYSK	24	0	Q5TH58;Q9H6K1-2;Q9H6K1	Q5TH58	C6orf106	Uncharacterized protein C6orf106	1	LS(0.285)QNS(0.191)VNLS(0.129)PS(0.101)S(0.286)HANNLS(0.006)VVT(0.001)YSK	77.233	0.00082325	20545000.0	2006.9	1641.7	2590.5	2167.8	1425.2	1493.1	1504.2	2181.4	1832.0	3075.3	True	False	1918.6790789942097	1912.9630208712827	2046.7894512770993	1977.7523397266268	1612.6387808045697	1781.620443488765	1841.555140397731	2104.67892557071	1746.8307198679072	2518.333369733714	0.7618844677410953	0.7596146895649314	0.8127555612279898	0.7853417516108093	0.6403595330887779	0.7074601261695356	0.7312594760210223	0.8357427776900151	0.6936455438592768	1.0	11.298253560183973	-12.152393240480874	4.002688199955856	1.0001008926112358	0.7487272263255335	0.6558443491785568	0.05485367059027111	15821118.434455931	34171288.85176882	20432.3886376466	0.014387217906691644	7.040552795601428e-13	12.152393240480874	-0.25137366628570235	
LSQSS(ph)QDSSPVRNLQSFGTEEPAYSTR	ddPTM_K562_Methotrexat_30min_R1	1	LSQSSQDSSPVRNLQSFGTEEPAYSTR	27	1	O95251;O95251-4;O95251-2	O95251	KAT7	Histone acetyltransferase KAT7	1	LS(0.011)QS(0.093)S(0.36)QDS(0.263)S(0.263)PVRNLQS(0.008)FGT(0.003)EEPAYSTR	66.075	0.00057686	24505000.0	522.84	723.02	734.64	745.35	723.47	711.06	665.63	684.33	704.29	678.92	True	False	499.856579630939	842.4867657613171	580.4491034496074	680.0063227305296	818.6189859308746	848.4622815264357	814.914471548292	660.2617260180635	671.547711624328	555.9610091306906	0.8990856758327758	1.5153702362664652	1.0440464239699232	1.2231187287644474	1.472439564081805	1.5261183205151467	1.4657763011519551	1.1876043736420638	1.207904332489738	1.0	9.118839896633062	-6.241046317469716	23.867314754480446	1.3076949467888366	0.8990849444004375	0.28992503139388603	0.18403480768766747	3436.405195382572	4021734.829807688	0.04659779024127933	1.7562851665945287	5.74055236000196e-07	6.241046317469716	-0.40861000238839906	
LSQSSQDS(ph)SPVR	ddPTM_K562_Methotrexat_30min_R1	1	LSQSSQDSSPVR	12	0	O95251;O95251-4;O95251-2	O95251	KAT7	Histone acetyltransferase KAT7	1	LSQSSQDS(0.526)S(0.474)PVR	142.1	1.8368000000000001e-06	17078000.0	2280.3	2564.5	3025.2	2167.0	2305.0	2290.2	2112.6	2128.5	2342.6	2482.0	True	False	2180.060742354125	2988.240035953219	2390.251861804085	1977.0224744845473	2608.1479018766017	2732.748737310274	2586.4043276188304	2053.639448554716	2233.6930373158084	2032.4857489282604	1.072608131940744	1.4702391087017128	1.176023921970659	0.9727116047564126	1.2832305974356233	1.3445352513547835	1.2725325769111315	1.0104077972687435	1.0989956699542152	1.0	10.989029521330112	-9.263325730235762	24.867328252138215	1.0410262891333009	1.2316301583716016	0.3033338260956885	0.13244522877230866	211.72573594126902	2791083.4231354655	0.07032993851247331	0.036492828013564745	5.453486843800227e-10	9.263325730235762	0.19060386923830075	
LSQSSQDS(ph)SPVRNLQSFGTEEPAYSTR	ddPTM_K562_Methotrexat_30min_R1	3	LSQSSQDSSPVRNLQSFGTEEPAYSTR	27	1	O95251;O95251-4;O95251-2	O95251	KAT7	Histone acetyltransferase KAT7	1	LSQS(0.009)S(0.024)QDS(0.482)S(0.482)PVRNLQS(0.002)FGT(0.002)EEPAYSTR;LSQS(0.002)S(0.005)QDS(0.489)S(0.489)PVRNLQS(0.006)FGT(0.009)EEPAYSTR;LSQS(0.002)S(0.005)QDS(0.495)S(0.495)PVRNLQS(0.001)FGT(0.001)EEPAYSTR	82.62700000000001	0.00028537	514618000.0	2998.2999999999997	2288.86	3453.56	3306.71	2450.9300000000003	2500.68	2831.76	2690.8199999999997	3030.22	3248.88	True	False	2866.4983220630484	2667.055211032126	2728.7049516898437	3016.815868298474	2773.2702547272966	2983.901018433785	3466.854264308388	2596.1823354287044	2889.3457336016004	2660.4763497091244	1.077438001798606	1.002472813307933	1.0256452578457158	1.1339382395292892	1.0423961314410872	1.1215664513462114	1.3030953139979713	0.9758336456223528	1.08602571637876	1.0	11.377468863409788	-7.246791550756552	23.702376495264005	1.1013107509547717	1.0319140890136345	0.08658056075418619	0.08653514274954914	936.7245524538981	1515754.1786531173	0.023770700249904006	0.04090757094953291	5.6651113334421004e-08	7.246791550756552	-0.06939666194113725	
LSQSSQDSS(ph)PVR	ddPTM_K562_Methotrexat_30min_R1	2	LSQSSQDSSPVR	12	0	O95251;O95251-4;O95251-2	O95251	KAT7	Histone acetyltransferase KAT7	1	LSQSS(0.002)QDS(0.244)S(0.755)PVR;LSQSSQDS(0.334)S(0.666)PVR	89.74700000000001	0.018596	40697000.0	6937.5	6081.9	8587.3	6624.0	6668.1	6499.9	5425.1	7643.0	7303.5	7875.200000000001	True	False	6632.535806727947	7086.830600375862	6784.9430823979255	6043.284204423457	7545.072027984103	7755.913683365235	6641.816774479281	7374.191357906363	6963.961879124053	6448.924967751745	1.0284715421398698	1.0989165846732603	1.052104516074611	0.937099475438663	1.1699736104410752	1.2026676883587837	1.0299106917342198	1.1434760669075035	1.0798639949988227	1.0	12.654842968770552	-7.782333328533989	24.999996072198076	1.1126865112931168	1.0357711691258527	0.2162103101891456	0.06855462831934377	368.29164914825867	440665.53844478715	0.021291461688244986	0.024166873353732306	1.650694375394448e-08	7.782333328533989	-0.07691534216726414	
LSS(ph)GFDDIDLPSAVK	ddPTM_K562_Methotrexat_30min_R1	2	LSSGFDDIDLPSAVK	15	0	Q9Y446;Q9Y446-2;E9PKC4	Q9Y446	PKP3	Plakophilin-3	1	LS(0.003)S(0.997)GFDDIDLPSAVK;LS(0.003)S(0.997)GFDDIDLPSAVK	255.72	3.1048e-90	30880000.0	4279.700000000001	2687.3999999999996	4448.4	4736.0	2092.51	2503.3	2357.2	3115.3999999999996	3663.6	5646.6	True	False	4091.569512368086	3131.4471720104066	3514.7416309828404	4320.802233114357	2367.7117423669456	2987.0272963535103	2885.862104072286	3005.8296161744684	3493.280035648507	4623.946023327281	0.8848653275203872	0.677223989253467	0.7601173571774776	0.9344404565529963	0.5120543644804912	0.645990952594234	0.6241124116746692	0.6500572456967275	0.7554759545257032	1.0	12.174908841598308	-10.036177107944418	19.4306113487802	1.0000000051912128	0.7070642758942239	0.34815057245657954	0.11785917226089401	304.0821518705683	163323.063457564	0.11678238643388408	0.030154118738317814	9.200742833190674e-11	10.036177107944418	-0.29293572929698886	
LSS(ph)PVLHR	ddPTM_K562_Methotrexat_30min_R1	2	LSSPVLHR	8	0	Q16643;Q16643-2;Q16643-3;D6RCR4;D6R9W4	Q16643	DBN1	Drebrin	1	LS(0.087)S(0.913)PVLHR;LS(0.266)S(0.734)PVLHR	130.66	0.00030277	334640000.0	8257.099999999999	7190.4	9887.2	8439.3	6666.200000000001	6849.9	6755.1	7616.1	7990.1	8714.5	True	False	7894.127770772372	8378.491384097497	7812.011836582489	7699.439671858529	7542.922144681041	8173.546229893306	8270.103130501733	7348.237446153425	7618.6419949872125	7136.219604768461	1.1062058355795936	1.1740798137012127	1.094698911922842	1.0789241500799276	1.0569913150711925	1.145360804820482	1.15889134423156	1.0297101060683855	1.0676019541069608	1.0	12.800944297038512	-9.279441988205411	24.53033106328079	1.0364920054140958	1.1152119817215842	0.5161900612333942	0.037196909768246356	617.2659817404665	841080.2988412766	0.02153842925918426	0.010378055672931865	5.254822028075455e-10	9.279441988205411	0.07871997630748839	
LSS(ph)TDDGYIDLQFK	ddPTM_K562_Methotrexat_30min_R1	2	LSSTDDGYIDLQFK	14	0	Q5JWB9;A0A087WTT2;Q96A57;Q96A57-2	Q5JWB9	TMEM230	Transmembrane protein 230	1	LS(0.001)S(0.967)T(0.032)DDGYIDLQFK;LSS(0.966)T(0.034)DDGYIDLQFK	255.28	2.1703e-76	20032200.0	7583.6	5059.5	10206.3	7991.0	5015.4	4467.9	4358.9	6052.7	5970.7	8798.4	True	False	7250.2340243462495	5895.49637820445	8064.137107342001	7290.441436827881	5675.013009575661	5331.258441807957	5336.494283658869	5839.823110296984	5693.123460215783	7204.924501760837	1.0062886880458413	0.8182592859597111	1.1192535196407927	1.0118692340282183	0.7876575262084599	0.7399464686278158	0.7406731718499845	0.8105321726646503	0.7901711473623936	1.0	12.814767597573434	-7.76483347612513	24.96164472306614	0.7949046388403506	0.9860375142184081	0.4365901011155594	0.09763101175803586	75.46050795940208	554969.5628205141	0.029324576267928313	0.03460666939871462	1.7185672203351793e-08	7.76483347612513	0.19113287537805757	
LSS(ph)TPPLSALGR	ddPTM_K562_Methotrexat_30min_R1	1	LSSTPPLSALGR	12	0	Q8N201	Q8N201	INTS1	Integrator complex subunit 1	1	LS(0.001)S(0.489)T(0.489)PPLS(0.021)ALGR	124.6	0.00073263	82861000.0	2460.5	2158.8	3197.0	2742.7	1976.8	2239.2	2107.4	2295.1	2598.4	2646.9	True	False	2352.3393661195137	2515.5050066741337	2525.993389589997	2502.251749316458	2236.7838492102683	2671.8937091018975	2580.0380952494197	2214.3800321249378	2477.6009511488937	2167.5207610145912	1.0852672825234722	1.1605448270293177	1.1653837116686296	1.1544303493292414	1.0319549825964554	1.232695786429845	1.1903175931019614	1.0216188338091914	1.143057540998665	1.0	11.08183009664177	-10.28644459901688	0.8686027689214848	1.0018293420728355	1.1416327159575907	0.28310402839639803	0.06340682353914094	1.3256786759408306	1.9385385100666186	0.061730200825003266	0.021116710631917546	5.170772149636699e-11	10.28644459901688	0.13980337388475528	
LSSAHNGGSAFGAAGYGGAQPTPPMPT(ph)RPVSFHER	ddPTM_K562_Methotrexat_30min_R1	1	LSSAHNGGSAFGAAGYGGAQPTPPMPTRPVSFHER	35	1	Q9Y446;Q9Y446-2;E9PK71;E9PQ15	Q9Y446	PKP3	Plakophilin-3	1	LSSAHNGGSAFGAAGY(0.162)GGAQPT(0.144)PPMPT(0.347)RPVS(0.347)FHER	45.132	0.026391	18267000.0	500.01	464.44	635.95	473.23	456.13	583.35	367.04	707.01	679.3	692.22	True	False	478.0301590950694	541.1808158698046	502.47278577096	431.74266063697405	516.1190900143055	696.0741314775781	449.35806324397237	682.1440575629168	647.7194912697979	566.8522502510555	0.8433064504610376	0.9547123004806259	0.8864263757415055	0.7616493723818822	0.9105002049223928	1.2279639556326911	0.7927251996352742	1.2033895203923055	1.1426601746450276	1.0	9.146828936216618	-8.02324909524049	23.564443804330924	1.0685998009132351	0.8657232317144157	0.40966023275147867	0.12228835773454215	381.650196699923	386826.16560588195	0.03945969446280067	0.03975869957383029	9.47874641546623e-09	8.02324909524049	-0.20287656919881947	
LSSESHHGGS(ph)PIHWVLPAGMSAK	ddPTM_K562_Methotrexat_30min_R1	2	LSSESHHGGSPIHWVLPAGMSAK	23	0	J3QR07;Q96MU7-2;Q96MU7	J3QR07	YTHDC1	YTH domain-containing protein 1	1	LS(0.149)S(0.149)ES(0.128)HHGGS(0.574)PIHWVLPAGMSAK;LS(0.164)S(0.149)ES(0.136)HHGGS(0.551)PIHWVLPAGMSAK	83.31200000000001	0.00066451	50276000.0	6539.0	4250.0	7446.1	6203.6	4373.3	4435.3	4249.6	6081.0	6326.9	8592.400000000001	True	False	6251.5533895775225	4952.240262351797	5883.265366977188	5659.740019710356	4948.46560489238	5292.358953188482	5202.680976355667	5867.127783256392	6032.763799963028	7036.233097941652	0.888480143076318	0.7038198128769361	0.836138496989	0.8043707394182309	0.7032833528980132	0.7521579912889306	0.739412822732896	0.8338449993893373	0.8573854384852352	1.0	12.780587562195393	-10.067948558952965	1.4342114380581708	0.9982728722226611	0.7734415141652144	0.5942458803025368	0.05580222409364195	0.32884618519126485	1.489152684063767	0.05173758622793057	0.015391771055018672	8.551679993018878e-11	10.067948558952965	-0.2248313580574467	
LSSETGGMGS(ph)S	ddPTM_K562_Methotrexat_30min_R1	1	LSSETGGMGSS	11	0	Q15366;Q15366-6;Q15366-3;Q15366-2;Q15366-7;Q15366-8;Q15366-4;H3BSS4;H3BRU6;Q15366-5;F8VZX2	Q15366	PCBP2	Poly(rC)-binding protein 2	1	LSSETGGMGS(0.625)S(0.375)	105.17	0.0030878	15857000.0	2795.6	3069.9	3724.8	3099.6	2687.8	2365.4	2422.7	2829.7	2643.4	3271.9	True	False	2672.7087713569244	3577.1487956220694	2943.0153824037593	2827.862880439456	3041.2928115678637	2822.4800730214515	2966.0521464177523	2730.1778471107727	2520.508910970976	2679.327204640764	0.997529815219143	1.3350921788970833	1.0984158177120997	1.0554376768695584	1.135095708467466	1.0534286622898232	1.1070137836395504	1.0189788848416617	0.9407245619741013	1.0	11.387655061320984	-8.87951743301629	0.650463793710875	0.9696570547903401	1.1468487243681966	0.3026371160775263	0.08616686542010327	0.8927597076758492	0.7489136244760358	0.0761423839792333	0.04869273267007255	1.3197223356650592e-09	8.87951743301629	0.17719166957785648	
LSSETGGMGSS(ph)	ddPTM_K562_Methotrexat_30min_R1	1	LSSETGGMGSS	11	0	Q15366;Q15366-6;Q15366-3;Q15366-2;Q15366-7;Q15366-8;Q15366-4;H3BSS4;H3BRU6;Q15366-5;F8VZX2	Q15366	PCBP2	Poly(rC)-binding protein 2	1	LSSETGGMGS(0.118)S(0.882)	103.34	0.0038305	19051000.0	4959.6	4177.7	5810.0	5179.6	4494.9	4425.8	3637.9	4843.4	5122.5	5494.7	True	False	4741.581922457363	4867.99391624167	4590.560398347788	4725.512509847789	5086.058136288561	5281.023212639867	4453.791680130905	4673.054876734748	4884.356093080436	4499.556585268379	1.0537887084210429	1.0818830309145484	1.0202250624822358	1.0502173759341515	1.1303465219084914	1.1736763640066272	0.9898290188665901	1.0385589753520168	1.085519428530335	1.0	12.135567120825739	-10.757769085852289	0.649339229981768	0.998344629705346	1.0731569349039398	0.14253331517466894	0.050416368308262405	6.138216018963066	3.5846829962711846	0.09000420384003324	0.021357906878990588	1.746750652460886e-11	10.757769085852289	0.07481230519859383	
LSSGDPSTS(ph)PSLSQTTPSKDTDDQSR	ddPTM_K562_Methotrexat_30min_R1	1	LSSGDPSTSPSLSQTTPSKDTDDQSR	26	1	Q99504-2;Q99504-4;Q99504-5;Q99504-3;Q99504	Q99504-2	EYA3	Eyes absent homolog 3	1	LSSGDPS(0.008)T(0.035)S(0.261)PS(0.224)LS(0.192)QT(0.13)T(0.13)PS(0.013)KDT(0.008)DDQSR	67.194	0.0010503	17981000.0	1999.9	1814.0	3002.4	2517.8	1576.3	1283.4	1461.1	1822.2	2240.4	2762.8	True	False	1911.9867906126444	2113.7326672720383	2372.2372702236485	2297.068383136682	1783.6110792746588	1531.3988863260874	1788.7888682589585	1758.112193167208	2136.2442930087673	2262.4301479206265	0.8451031261097407	0.9342753274459084	1.0485350331827679	1.0153101899070303	0.7883607283583783	0.6768822841817144	0.7906493245340696	0.7770901544885568	0.94422552447516	1.0	11.14365753462403	-7.768116183359891	24.997045116369957	0.8088122719795406	0.9651772468813695	0.28130442669212163	0.09944045779600591	176.16472505641065	659535.4418657917	0.03116368618130245	0.03613746587895857	1.7056260353515547e-08	7.768116183359891	0.15636497490182888	
LSSGDPSTSPSLSQT(ph)TPSKDTDDQSR	ddPTM_K562_Methotrexat_30min_R1	1	LSSGDPSTSPSLSQTTPSKDTDDQSR	26	1	Q99504-2;Q99504-4;Q99504-5;Q99504-3;Q99504	Q99504-2	EYA3	Eyes absent homolog 3	1	LSS(0.001)GDPS(0.008)T(0.037)S(0.161)PS(0.161)LS(0.115)QT(0.241)T(0.241)PS(0.033)KDT(0.002)DDQSR	72.271	0.0025019	23079000.0	958.76	519.95	1148.2	660.24	649.9	702.71	639.45	725.67	659.61	1272.2	True	False	916.6140583868087	605.8628998611332	907.2085110814	602.3577842887299	735.3732414011291	838.4987622021235	782.8629401192189	700.1477747863281	628.9448750720906	1041.7922521299486	0.879843420329521	0.5815582700125135	0.870815183379036	0.5781937646946471	0.7058732102275243	0.8048617759325906	0.7514578252224975	0.6720608387659566	0.6037142950393518	1.0	10.024851897495644	-10.775658060440708	21.959469911615976	0.9999875605458609	0.7149987250447047	0.39302805569720556	0.10568362691673298	0.0	0.0	0.09601037383391517	0.02328593602778061	1.676262153106057e-11	10.775658060440708	-0.28498883550115617	
LSSLSLS(ph)PANHENQPSEGER	ddPTM_K562_Methotrexat_30min_R1	3	LSSLSLSPANHENQPSEGER	20	0	G8JLP4;Q9Y4F3-3;Q9Y4F3-4;Q9Y4F3-5;Q9Y4F3	G8JLP4	KIAA0430	Meiosis arrest female protein 1	1	LSS(0.002)LS(0.428)LS(0.57)PANHENQPSEGER;LSS(0.004)LS(0.014)LS(0.982)PANHENQPSEGER;LS(0.007)S(0.008)LS(0.107)LS(0.874)PANHENQPS(0.004)EGER	131.25	1.0985999999999999e-07	50143000.0	2673.13	2329.91	3305.67	2941.95	2440.73	2650.92	2339.19	3361.31	3044.7200000000003	3432.62	True	False	2555.622405915485	2714.8880258014296	2611.8550416534126	2684.0338111720425	2761.7287759424203	3163.1727721205807	2863.8129031159206	3243.090822091356	2903.1716317664946	2810.9392552321206	0.9091702715235118	0.965829489466232	0.9291751989274959	0.9548530108490023	0.9824932256369102	1.1253081212028446	1.018809957484988	1.1537392051624216	1.0328119422583388	1.0	11.456836561887178	-8.063230812392726	4.227116443920261	1.0725434976859338	0.9428689619840541	0.6269569066541497	0.04612271547663269	0.1345161358267367	4.760294216081175	0.01440638889729818	0.014825147779392511	8.645083405852899e-09	8.063230812392726	-0.1296745357018797	
LSSS(ph)ASREPYK	ddPTM_K562_Methotrexat_30min_R1	1	LSSSASREPYK	11	1	J3QR07;Q96MU7-2;Q96MU7	J3QR07	YTHDC1	YTH domain-containing protein 1	1	LS(0.001)S(0.029)S(0.912)AS(0.058)REPYK	97.463	0.022113	10301000.0	2502.1	1610.5	2477.7	2382.9	1592.3	1532.3	1230.6	1839.5	1895.8	2813.3	True	False	2392.1106799299455	1876.6077511806043	1957.664629773892	2173.9948566909216	1801.715359721525	1828.3952886999107	1506.5933757302541	1774.803742361475	1807.6646717934389	2303.7841085656232	1.0383397780355885	0.8145762201428733	0.849760453896337	0.9436625804509474	0.782067795772454	0.7936487112233368	0.6539646532540264	0.7703863117045717	0.7846502044494624	1.0	11.169789810428743	-7.776430383059236	23.548802728266562	0.7786075621341058	0.9002395354948904	0.23012532058112511	0.09784496101867546	159.76227974587798	250963.012089066	0.02930237361751143	0.03338339221805094	1.673283840510912e-08	7.776430383059236	0.12163197336078468	
LSSS(ph)DRYSDASDDS(ph)FSEPR	ddPTM_K562_Methotrexat_30min_R1	1	LSSSDRYSDASDDSFSEPR	19	1	Q9NRF8	Q9NRF8	CTPS2	CTP synthase 2	2	LS(0.009)S(0.083)S(0.464)DRY(0.001)S(0.287)DAS(0.157)DDS(0.54)FS(0.46)EPR	129.06	1.6406e-05	10944000.0	1762.2	1729.9	2333.8	1622.3	1769.9	1521.1	1631.8	1770.0	1936.6	2347.7	True	False	1684.735797998702	2015.736571727619	1843.9672732640386	1480.0754777832406	2002.6728726817335	1815.0310472110118	1997.7726885394338	1707.7480967544502	1846.5678886987923	1922.5087803218676	0.8763215103322662	1.0484927779576347	0.9591463467622345	0.7698666934230831	1.0416976469394563	0.9440950625500594	1.0391487981682797	0.8882914420128359	0.9604990664280029	1.0	10.908774471820783														
LSSS(ph)PGLFGAFSVR	ddPTM_K562_Methotrexat_30min_R1	2	LSSSPGLFGAFSVR	14	0	Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5	Q5VT52-2	RPRD2	Regulation of nuclear pre-mRNA domain-containing protein 2	1	LSS(0.084)S(0.916)PGLFGAFSVR;LSS(0.117)S(0.882)PGLFGAFSVR	203.85	9.379200000000001e-13	16394300.0	3884.1000000000004	3122.7	3333.8	3712.5	3177.4	2793.3999999999996	3096.9	4585.0	4082.9	5045.200000000001	True	False	3713.3596146900227	3638.673098175522	2634.0809390726095	3387.030889028093	3595.2837932419584	3333.185015632922	3791.4586586210144	4423.742951197262	3893.0868701684944	4131.465391012433	0.8987996420756772	0.8807221539580292	0.6375657762504254	0.8198134483702129	0.8702199953225116	0.8067803309895597	0.917703114945349	1.070744283812869	0.9423017021121595	1.0	12.012437867123905	-8.954507333152995	3.5862072902580455	1.0049503759299891	0.8161677257484119	0.5596581645675818	0.07392158974128887	0.17756968729990513	4.745621083597004	0.035968913295087133	0.022322087068050406	1.1104337852690517e-09	8.954507333152995	-0.18878265018157725	
LSSS(ph)PPSGSGGGGGASSSSHCSGESQCR	ddPTM_K562_Methotrexat_30min_R1	4	LSSSPPSGSGGGGGASSSSHCSGESQCR	28	0	Q9Y4X0-2;Q9Y4X0-3;Q9Y4X0	Q9Y4X0-2	AMMECR1	AMME syndrome candidate gene 1 protein	1	LS(0.028)S(0.15)S(0.82)PPS(0.001)GSGGGGGASSSSHCSGESQCR;LS(0.01)S(0.044)S(0.83)PPS(0.058)GS(0.058)GGGGGASSSSHCSGESQCR;LS(0.008)S(0.157)S(0.714)PPS(0.099)GS(0.02)GGGGGASSSSHCSGESQCR;LS(0.003)S(0.036)S(0.529)PPS(0.241)GS(0.19)GGGGGASSSSHCSGESQCR	180.4	7.118499999999999e-35	104858000.0	4179.54	3413.41	5156.960000000001	4540.78	3373.44	3244.54	3422.49	3970.8500000000004	3606.0800000000004	4625.03	True	False	3995.8124260398913	3977.4179844504106	4074.584570028161	4142.696867415758	3817.106489417183	3871.5014357491405	4190.07050422805	3831.1929548007943	3438.434127893702	3787.3922495429783	1.0550299949845603	1.0501732385734175	1.075828512486352	1.0938124689661215	1.0078455670594433	1.0222076776484694	1.1063207157203383	1.0115648716509629	0.9078632212727941	1.0	11.886989129482329	-9.534819337322261	7.913083649036295	0.9552764425346546	1.0572358193133236	0.5930291672174921	0.0347344761516233	0.10056586372425279	39.73011427324862	0.022350117164612385	0.008777048978928921	2.918640890395874e-10	9.534819337322261	0.10195937677866895	
LSSS(ph)WESLQPEPSHPY	ddPTM_K562_Methotrexat_30min_R1	3	LSSSWESLQPEPSHPY	16	0	P11277	P11277	SPTB	Spectrin beta chain, erythrocytic	1	LS(0.004)S(0.029)S(0.507)WES(0.46)LQPEPSHPY;LS(0.018)S(0.123)S(0.847)WES(0.012)LQPEPSHPY;LS(0.002)S(0.039)S(0.959)WESLQPEPSHPY	230.23	2.5782e-40	307634000.0	4834.6	3795.2000000000003	5140.629999999999	4775.139999999999	4077.35	3857.09	3724.13	4451.4	4726.9	4828.71	True	False	4622.07677278659	4422.2922926300125	4061.6820138655044	4356.510890083127	4613.592992501761	4602.418053965629	4559.360952672119	4294.841738922461	4507.147450733412	3954.1838278434266	1.1689079147611166	1.1183830811027033	1.0271859353794146	1.1017471821635378	1.1667623948120716	1.163936289850172	1.1530472914707028	1.0861512579866137	1.1398426696797166	1.0	11.949164227391655	-12.301666550060755	4.090977762992317	0.9998284570250185	1.1233854554254044	0.4401598078496408	0.0422881301333979	37755162.67387755	16.789644884701183	61012.20613560964	0.011091953720526435	4.992676764895121e-13	12.301666550060755	0.12355699840038581	
LSSSPPRAS(ph)PVR	ddPTM_K562_Methotrexat_30min_R1	1	LSSSPPRASPVR	12	1	Q9Y2K6	Q9Y2K6	USP20	Ubiquitin carboxyl-terminal hydrolase 20	1	LSS(0.001)S(0.004)PPRAS(0.995)PVR	118.08	0.0031666999999999997	21158000.0	3955.6	3053.7	3581.0	4004.6	3376.8	3191.8	3216.6	3766.8	4230.4	4946.3	True	False	3781.716560301705	3558.2720209749837	2829.397037260488	3653.522935542602	3820.908388311022	3808.570177166593	3938.0044306630384	3634.3195089574374	4033.7296273630973	4050.47713937303	0.9336471803633174	0.878482188280111	0.698534256558833	0.9019981621493927	0.9433230349998858	0.9402769219816208	0.9722322321939086	0.8972571338891672	0.9958652989675866	1.0	11.983876149711566	-7.515006759101819	18.8959883438739	0.9500891619200734	0.8342504341271073	0.43302341546212897	0.061858861837603	14.419147738682595	34611.42984583686	0.018158530535004633	0.024720359531846477	3.054873568604576e-08	7.515006759101819	-0.11583872779296611	
LSSSSATLLNS(ph)PDR	ddPTM_K562_Methotrexat_30min_R1	1	LSSSSATLLNSPDR	14	0	A0A087WZ40;Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7	A0A087WZ40	MAP7	Ensconsin	1	LSSSSATLLNS(1)PDR	90.229	0.015388999999999998	15719000.0	597.47	693.56	781.33	739.09	552.57	612.11	524.76	654.46	580.72	818.95	True	False	571.2059341903778	808.159001495697	617.3395105062098	674.2951272112525	625.2426404077894	730.3915944437134	642.4507881100344	631.4422708485405	553.7224539528886	670.6302192122479	0.8517449972077633	1.2050739414114033	0.9205363743246826	1.00546487154025	0.9323210056687086	1.0891122611528956	0.9579806720679628	0.9415654898317297	0.8256747729073641	1.0	9.38937368353179	-9.181564102854978	3.038615573010324	0.9099555762568761	1.004066796932384	0.10398981405250995	0.09979633427076355	0.5139253899757851	9.17828324378646	0.05267941233389559	0.026493698964354613	6.5831825349777e-10	9.181564102854978	0.09411122067550792	
LSSSSATLLNS(ph)PDRAR	ddPTM_K562_Methotrexat_30min_R1	2	LSSSSATLLNSPDRAR	16	1	A0A087WZ40;Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7	A0A087WZ40	MAP7	Ensconsin	1	LSSSSAT(0.006)LLNS(0.994)PDRAR;LSSSSATLLNS(1)PDRAR	137.27	8.3145e-06	29692800.0	5167.66	4461.4	6069.0	5528.799999999999	4589.0	5193.2	4142.51	4836.65	4961.04	6320.200000000001	True	False	4940.495853981368	5198.570519166189	4795.199837792211	5044.0986880157625	5192.533935666695	6196.712401798846	5071.573317809468	4666.542278060681	4730.4023332388	5175.5505360098305	0.9545836369690476	1.0044478327467181	0.9265100986704196	0.9746013787172074	1.0032814672639556	1.1973049743566597	0.9799099211809599	0.9016513790354027	0.9139901736687079	1.0	12.337496618448206	-9.00710585890038	24.991380122059002	0.9328485793377401	1.0111768142406095	0.16290932299921312	0.07231772166972515	589.2727777839245	2072477.998076063	0.03364913236096492	0.021696553764801542	9.837712831436196e-10	9.00710585890038	0.07832823490286933	
LSSTPPLS(ph)ALGR	ddPTM_K562_Methotrexat_30min_R1	1	LSSTPPLSALGR	12	0	Q8N201	Q8N201	INTS1	Integrator complex subunit 1	1	LS(0.06)S(0.342)T(0.242)PPLS(0.356)ALGR	90.861	0.017283	83401000.0	4016.2	3381.7	4108.9	3498.5	3595.5	3230.0	3175.5	4079.3	3888.5	4471.6	True	False	3839.652656862096	3940.468445928253	3246.49804144083	3191.7919367716586	4068.371271669119	3854.1517865305177	3887.6867094355785	3935.82870683075	3707.724483737094	3661.7499093100773	1.048584079185664	1.076116213155226	0.8865974252328209	0.8716575451142797	1.11104564004363	1.0525436968623265	1.0617018654253398	1.0748491306912635	1.0125553562000849	1.0	11.83831754578123	-7.782719084341846	24.99998262906153	1.0563590736792035	0.9722555958425432	0.2705222456397145	0.0652235469310175	343.70023030764133	403786.2407362325	0.021880054932664983	0.02483308113622094	1.6492288209057263e-08	7.782719084341846	-0.08410347783666028	
LSSVT(ph)AADT(ph)AVY(ph)Y(ph)CAR	ddPTM_K562_Methotrexat_30min_R1	1	LSSVTAADTAVYYCAR	16	0	P0DP08;A0A087WW49;A0A075B6R2;P0DP07;P0DP06;A0A0C4DH41;A0A087WSY4;P01825;P06331;P01824	P0DP08	IGHV4-4;IGHV4-61;IGHV4-31	Ig heavy chain V-II region NEWM;Ig heavy chain V-II region ARH-77;Ig heavy chain V-II region WAH	4	LS(0.123)S(0.123)VT(0.836)AADT(0.966)AVY(0.961)Y(0.991)CAR	41.088	0.032471	32291000.0	1575.5	1649.4	1726.4	1970.6	1438.5	1457.2	1548.6	1894.7	1626.0	1965.0	True	False	1506.2429064504336	1921.9353149936596	1364.0522326519144	1797.8405575538752	1627.6879639260267	1738.7832765734586	1895.9129706288566	1828.0623270738167	1550.4076149045939	1609.1194587606888	0.9360665538222447	1.194401885161401	0.8477010362564876	1.1172822177779986	1.011539544229761	1.080580603948842	1.1782300936743693	1.1360637752039575	0.9635130608007726	1.0	10.652055718345723	-7.932413519056931	1.7280455098461285	1.0840569732459313	1.01906749784324	0.04300815748871878	0.10509301323171516	1.0893629667980458	6.65350210604686	0.03834066560907217	0.044588388564403975	1.1683863671602782e-08	7.932413519056931	-0.0649894754026914	
LSSWDQAET(ph)PGHTPSLR	ddPTM_K562_Methotrexat_30min_R1	2	LSSWDQAETPGHTPSLR	17	0	O75533	O75533	SF3B1	Splicing factor 3B subunit 1	1	LSSWDQAET(1)PGHTPSLR;LSSWDQAET(0.998)PGHT(0.001)PSLR	129.2	0.00010438	36374000.0	2902.0	2455.5	2704.8	2989.8	2629.6	2247.2	2749.3999999999996	2613.5	2767.3	3406.5	True	False	2774.4315547566857	2861.2296386364314	2137.09944327902	2727.6888759639605	2975.43849144239	2681.4395958796827	3366.0229377805604	2521.5817236540997	2638.6488270144423	2789.5498403400975	0.9945803852059626	1.0256958299363437	0.7661090733616246	0.9778240332968581	1.0666375084661077	0.9612445553411463	1.2066545250792795	0.9039385807663765	0.945904887181633	1.0	11.4458166126278	-7.518394319325878	24.958606977563047	1.0167927070061815	0.9273987382064202	0.12715231776606495	0.09992536769383067	382.4748095643116	2128716.5326847266	0.02966255290738225	0.0393009055539705	3.031137801321174e-08	7.518394319325878	-0.08939396879976136	
LST(ph)HSPFR	ddPTM_K562_Methotrexat_30min_R1	1	LSTHSPFR	8	0	A0A2R8Y6D0;A0A1B0GWG0;A0A2R8Y783;P11171;A0A2R8Y5Z6;A0A2R8Y420;A0A2R8Y5G2;A0A2R8YD30;A0A2R8YCW8;P11171-2;P11171-4;P11171-7;P11171-3;Q4VB86;A0A2R8Y6G5;A0A2U3TZH6;A0A3B3IU06;A0A2R8Y570;A0A2R8Y5C8;A0A2R8Y4N6;A0A2R8YFR9;A0A2R8Y7Y3;A0A2R8Y7N0;P11171-5;P11171-6;A0A3B3IUD6	A0A2R8Y6D0;P11171	EPB41	Protein 4.1	1	LS(0.02)T(0.606)HS(0.374)PFR	110.53	0.0011543	0.0	3239.0	3254.0	4038.6	4090.5	3540.4	3056.7	3067.9	3467.7	3486.1	4173.5	True	False	3096.617438269091	3791.6681914571172	3190.953050734488	3731.892215910956	4006.024655880225	3647.364014206757	3755.954670406991	3345.7390254889274	3324.0319719058452	3417.638707958138	0.9060692784929157	1.1094409080246057	0.9336718487253197	1.0919504765735077	1.172161541403426	1.0672175516135431	1.098991143113246	0.9789621757555037	0.972610698774471	1.0	11.738784176764788	-9.281615347180287	23.458678884835017	0.9818397892438537	1.0581904054584208	0.15141330428115396	0.07587550762528164	709.51943209485	824952.207508919	0.04172018507146449	0.020097853311714653	5.228590780942822e-10	9.281615347180287	0.07635061621456707	
LST(ph)PPPLAEEEGLASR	ddPTM_K562_Methotrexat_30min_R1	2	LSTPPPLAEEEGLASR	16	0	P16157-10;P16157-8;P16157-5;P16157-16;P16157-3;P16157;P16157-21;P16157-12;P16157-14;P16157-2;H0YBS0;P16157-11;P16157-9;P16157-6;P16157-7;P16157-4;P16157-13;P16157-15	P16157-10;H0YBS0	ANK1	Ankyrin-1	1	LS(0.007)T(0.993)PPPLAEEEGLASR;LS(0.084)T(0.916)PPPLAEEEGLASR	246.77	6.288499999999999e-65	41812000.0	3786.2	3755.7	5491.8	4405.0	3510.7	3062.3999999999996	3247.5	4328.700000000001	3914.3999999999996	4652.0	True	False	3619.763181467874	4376.265589015213	4339.146229887502	4018.8204892037056	3972.418585300729	3654.1654585359306	3975.8345422428088	4176.4571674694835	3732.4203983902485	3809.477721198334	0.9501993308230235	1.1487836153136988	1.1390396656585648	1.0549531414347055	1.0427724942964463	0.9592300378085562	1.0436691938421796	1.096333270103942	0.9797722080432995	1.0	11.895377502672973	-7.664183451307594	3.161290817250768	1.0225905095199013	1.0870689079562856	0.1526116680505929	0.06165157360849797	0.4451393714862998	8.866524001345539	0.019328463666118168	0.025445185065770374	2.16678863342655e-08	7.664183451307594	0.06447839843638437	
LSTHS(ph)PFR	ddPTM_K562_Methotrexat_30min_R1	4	LSTHSPFR	8	0	A0A2R8Y6D0;A0A1B0GWG0;A0A2R8Y783;P11171;A0A2R8Y5Z6;A0A2R8Y420;A0A2R8Y5G2;A0A2R8YD30;A0A2R8YCW8;P11171-2;P11171-4;P11171-7;P11171-3;Q4VB86;A0A2R8Y6G5;A0A2U3TZH6;A0A3B3IU06;A0A2R8Y570;A0A2R8Y5C8;A0A2R8Y4N6;A0A2R8YFR9;A0A2R8Y7Y3;A0A2R8Y7N0;P11171-5;P11171-6;A0A3B3IUD6	A0A2R8Y6D0;P11171	EPB41	Protein 4.1	1	LST(0.046)HS(0.954)PFR;LS(0.01)T(0.261)HS(0.729)PFR;LS(0.004)T(0.046)HS(0.951)PFR;LS(0.002)T(0.106)HS(0.892)PFR	121.61	2.1051999999999997e-09	181335000.0	22219.899999999998	20485.9	26694.7	24093.1	20289.8	19085.1	19583.5	21965.2	21239.699999999997	25290.1	True	False	21243.139801357018	23870.846774238278	21091.847274660016	21980.895329950923	22958.26433817609	22773.02546783701	23975.598385838948	21192.67146600611	20252.270982957638	20709.817823920454	1.0257521327310066	1.1526343194900894	1.0184467798793626	1.061375600540645	1.108569111199936	1.0996246157961607	1.1576923848237053	1.023315204710683	0.9779067664982386	1.0	14.338027242345802	-9.488312535013574	9.526202804427058	0.9927215251179863	1.0891133315903536	0.47295006509006454	0.04390627867195733	0.3820951433785174	103.93782236266178	0.024252774031707232	0.011358722764495753	3.248534362201453e-10	9.488312535013574	0.09639180647236734	
LSVGEQPDVTHDPYEFLQS(ph)PEPAASAK	ddPTM_K562_Methotrexat_30min_R1	2	LSVGEQPDVTHDPYEFLQSPEPAASAK	27	0	Q9H8M2-2;Q9H8M2-3;Q9H8M2-1;Q9H8M2-6;Q9H8M2	Q9H8M2-2	BRD9	Bromodomain-containing protein 9	1	LSVGEQPDVTHDPY(0.011)EFLQS(0.987)PEPAAS(0.002)AK;LSVGEQPDVTHDPY(0.008)EFLQS(0.984)PEPAAS(0.008)AK	73.805	0.00017853	20861500.0	2496.1000000000004	1671.6100000000001	3221.3	2081.14	1720.55	1418.4	1524.79	2051.92	1811.77	2532.43	True	False	2386.3744327457507	1947.8151399882092	2545.1931516691457	1898.689687378297	1946.8324826784326	1692.4857257012022	1866.7629720296873	1979.7528105606723	1727.5412081523348	2073.78238725157	1.1507352205399264	0.9392572489583596	1.2273193018300954	0.9155684314084048	0.9387834011159739	0.8161346803336926	0.9001730285228962	0.9546579345697321	0.8330388081084455	1.0	11.018048797277759	-7.385863357861819	8.387776583587101	0.9024828798840009	1.0887909002201221	0.531690364888712	0.08441048811150414	0.2275924011064092	14.482390563609927	0.02241664392411199	0.03328095293839516	4.1127910155555914e-08	7.385863357861819	0.18630802033612126	
LSVGEQPDVTHDPYEFLQS(ph)PEPAASAKT	ddPTM_K562_Methotrexat_30min_R1	2	LSVGEQPDVTHDPYEFLQSPEPAASAKT	28	1	Q9H8M2-2;Q9H8M2-3;Q9H8M2-1;Q9H8M2-6;Q9H8M2	Q9H8M2-2	BRD9	Bromodomain-containing protein 9	1	LSVGEQPDVTHDPYEFLQS(0.993)PEPAAS(0.007)AKT(0.001);LS(0.002)VGEQPDVT(0.003)HDPY(0.01)EFLQS(0.865)PEPAAS(0.086)AKT(0.034)	108.99	1.024e-11	18986100.0	3931.0	3015.93	5609.799999999999	4641.32	2951.7400000000002	2729.77	2934.5	3604.46	3474.0	5488.900000000001	True	False	3758.197946846495	3514.2611704552155	4432.37964245291	4234.422681714175	3339.9455478894765	3257.2594186741185	3592.636324622485	3477.6890987726224	3312.494498264796	4494.807021471528	0.8361199777640557	0.7818491769875144	0.9861112215228808	0.9420699624002752	0.7430676182391545	0.7246716940492239	0.7992859999240441	0.7737126604456719	0.7369603372160655	1.0	12.134043461549195	-7.7672803946567806	24.99992816244662	0.7815382611462516	0.8861722460671816	0.18327808890547703	0.09016853600611754	209.77346521098042	897843.2060067975	0.027427774949277523	0.031927399972245	1.7089116298560376e-08	7.7672803946567806	0.10463398492093001	
LSVPT(ph)S(ph)DEEDEVPAPKPR	ddPTM_K562_Methotrexat_30min_R1	2	LSVPTSDEEDEVPAPKPR	18	1	Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6	Q5STZ8	ABCF1	ATP-binding cassette sub-family F member 1	2	LS(0.001)VPT(1)S(0.999)DEEDEVPAPKPR;LS(0.008)VPT(0.996)S(0.996)DEEDEVPAPKPR	116.87	0.00067109	123089000.0	9237.0	6140.1	10348.6	10614.8	5816.8	5045.4	5784.9	6753.1	7621.4	9401.5	True	False	8830.952540071507	7154.647161145007	8176.570281986567	9684.21696454018	6581.811156458057	6020.3521435792745	7082.311083424302	6515.589645306486	7267.082777511608	7698.797247602351	1.147056125269664	0.9293201172914627	1.0620581396052495	1.2578869988498724	0.854914208645752	0.7819860622325394	0.9199243538502014	0.8463126688179309	0.9439244266076506	1.0	12.910417361579428	-7.793535014614311	24.98859689806453	0.8794703067756481	1.084310296017807	0.5310571445122272	0.09492469967489883	154.25252443714797	120095.02084839686	0.029627492520601328	0.033596923034614874	1.6086626756333057e-08	7.793535014614311	0.20483998924215896	
LSVPTS(ph)DEEDEVPAPKPR	ddPTM_K562_Methotrexat_30min_R1	6	LSVPTSDEEDEVPAPKPR	18	1	Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6	Q5STZ8	ABCF1	ATP-binding cassette sub-family F member 1	1	LSVPT(0.146)S(0.853)DEEDEVPAPKPR;LSVPT(0.163)S(0.837)DEEDEVPAPKPR;LSVPT(0.002)S(0.998)DEEDEVPAPKPR;LSVPT(0.029)S(0.971)DEEDEVPAPKPR;LSVPT(0.065)S(0.935)DEEDEVPAPKPR;LSVPT(0.041)S(0.959)DEEDEVPAPKPR	273.54	2.8305999999999995e-134	1912264000.0	24226.699999999997	18823.5	40059.4	26756.3	19223.2	19169.0	17557.6	25620.8	24212.799999999996	33789.50000000001	True	False	23161.723276231503	21933.763430206855	31651.479384091814	24410.616720835653	21751.3877428869	22873.137955419024	21495.338740225507	24719.70194199231	23087.15221289175	27669.894123050544	0.8370730720265573	0.7926941582307979	1.1438959340912112	0.8822085336604257	0.7861030348058613	0.8266434939613463	0.7768493310684086	0.8933789855523674	0.8343780467760764	1.0	14.75602950313439	-7.520630829801314	24.973401327521056	0.8416928121322648	0.9283156668760224	0.08052732750102609	0.10416370324516395	188.0340452491624	2088999.053840233	0.030725933943821636	0.04033845033427686	3.0155683061653514e-08	7.520630829801314	0.08662285474375764	
LSVPYVPQVTDEDRLS(ph)R	ddPTM_K562_Methotrexat_30min_R1	4	LSVPYVPQVTDEDRLSR	17	1	A0A1B0GUZ7;Q14156-3;Q14156-2;Q14156	A0A1B0GUZ7	EFR3A	Protein EFR3 homolog A	1	LSVPYVPQVTDEDRLS(1)R;LSVPYVPQVTDEDRLS(1)R;LSVPYVPQVTDEDRLS(1)R;LSVPYVPQVTDEDRLS(1)R	166.38	7.161e-11	278280000.0	9379.4	7566.9	8470.6	10241.599999999999	7535.9	7225.700000000001	7578.4	9958.3	10592.1	12140.0	True	False	8967.09280657645	8817.20160969172	6692.7368175980655	9343.734829109795	8527.002938720989	8621.964261279743	9278.04911314331	9608.060944581823	10099.675582921864	9941.3283609948	0.9020014711272588	0.8869238887920012	0.6732235949329757	0.9398879596181848	0.8577327525139424	0.8672849289546019	0.9332806216869476	0.9664765709056986	1.0159281754084641	1.0	13.2792229223428	-9.0091923000695	1.061141692025652	1.011660108201435	0.8435515673289609	0.48185760942711375	0.06629930412944036	0.4721460610395402	0.9873593809498573	0.053947136562832586	0.025006478859626934	9.790563757142355e-10	9.0091923000695	-0.16810854087247407	
LSVQSNPS(ph)PQLR	ddPTM_K562_Methotrexat_30min_R1	3	LSVQSNPSPQLR	12	0	E9PBY7;E9PQ61;O75152;A0A1W2PPR9	E9PBY7	ZC3H11A	Zinc finger CCCH domain-containing protein 11A	1	LSVQS(0.001)NPS(0.999)PQLR;LSVQS(0.001)NPS(0.999)PQLR;LSVQSNPS(1)PQLR	164.88	0.00015377	213676000.0	4355.8	3825.8799999999997	5892.4	4775.8	4186.2	4072.8	3756.1000000000004	4816.2	5179.3	5368.7	True	False	4164.324247487654	4458.041641159176	4655.665764410413	4357.1130289078465	4736.758675416846	4859.8109585701195	4598.501038989443	4646.811516151854	4938.515473478089	4396.37640623334	0.947217404220286	1.0140263774590375	1.0589779705417042	0.9910691502051951	1.0774233681858767	1.1054128467434465	1.045975279202555	1.0569639827844217	1.1233149796901112	1.0	12.102099196008087	-4.469458060965402	0.5930140235490625	1.0680939457496352	3.1945549716742994e-19	0.45007790962051186	0.03820353461805924	23.273218966392786	1.1150820052583756	0.017334351221016408	26.84067547777651	3.392672503858809e-05	4.469458060965402	-1.0680939457496352	
LSYLPATVEPASPT(ph)PAHSLPR	ddPTM_K562_Methotrexat_30min_R1	3	LSYLPATVEPASPTPAHSLPR	21	0	E9PCV4;M0R344;Q9NRA0-4;Q9NRA0-2;Q9NRA0;Q9NRA0-5	E9PCV4	SPHK2	Sphingosine kinase 2	1	LSYLPATVEPAS(0.019)PT(0.969)PAHS(0.012)LPR;LSYLPAT(0.024)VEPAS(0.26)PT(0.56)PAHS(0.156)LPR;LSYLPATVEPAS(0.122)PT(0.868)PAHS(0.011)LPR	121.38	5.738e-06	41833900.0	4777.16	3919.39	4928.0	4374.88	4300.8099999999995	3593.34	3997.23	4517.719999999999	4593.620000000001	4999.299999999999	True	False	4567.16176640987	4567.002579260945	3893.680145104632	3991.34106283939	4866.441899292801	4287.702099260546	4893.710579611767	4358.82922693193	4380.063608842585	4093.878325792529	1.1156075982120741	1.115568714020543	0.9510981605323747	0.9749535147864247	1.1887119039745064	1.0473447811692094	1.1953727468596418	1.06471880208802	1.069905664085572	1.0	11.99925250930375	-6.601711292830255	24.44413049886862	1.0671363375757066	1.1157749029850657	0.07077786909525818	0.07622361375545558	75.73419350363731	23476.740812305135	0.020176030064552913	0.05338076595896175	2.5020080759491335e-07	6.601711292830255	0.04863856540935907	
LT(ph)ALLGQPRPGPARRPY(ph)AGGAAQES(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	LTALLGQPRPGPARRPYAGGAAQESK	26	3	P49748-2	P49748-2			3	LT(1)ALLGQPRPGPARRPY(1)AGGAAQES(1)K	41.354	0.032567	46944000.0	1674.7	1231.1	1945.8	1826.3	1257.9	1267.2	1288.6	1684.0	1963.7	2210.3	True	False	1601.0821932291603	1434.5183498779518	1537.4031709303144	1666.1911145136721	1423.3358983820292	1512.068465601074	1577.6013521582997	1624.7727654997127	1872.4080156138702	1809.9932517550894	0.8845790953511262	0.7925545294088515	0.8493971839063744	0.920551009180848	0.7863763563769469	0.8354000569531804	0.871606206613507	0.8976678581117501	1.034483423514568	1.0	10.821768603143155	-9.604693602509803	2.684473218890193	1.0195186432369208	0.8466506741689602	0.7387983809146512	0.039297801489803594	0.13860036558704553	1.8781387019907698	0.03344281943147142	0.010551791909411093	2.484885589450461e-10	9.604693602509803	-0.17286796906796054	
LT(ph)GLGQSNAALR	ddPTM_K562_Methotrexat_30min_R1	1	LTGLGQSNAALR	12	0	Q08378;Q08378-2	Q08378	GOLGA3	Golgin subfamily A member 3	1	LT(1)GLGQSNAALR	95.18299999999999	0.026444	19165000.0	4211.5	3091.2	3327.2	3710.1	3029.1	2740.1	3005.6	4313.0	4167.1	4691.2	True	False	4026.367502707713	3601.96825858397	2628.866188878272	3384.841293301854	3427.4797438500705	3269.5855449759333	3679.6823095196255	4161.3093453683305	3973.372430546704	3841.5782213425678	1.0481024388202005	0.9376272071131073	0.6843193181055486	0.8811069561194327	0.8922061575651643	0.8511047690793259	0.9578569268943944	1.083229106789871	1.034307308509802	1.0	11.907483414446205	-9.001019985878507	3.9062938724380825	1.0426584967018888	0.8768668256195269	0.3966785858777412	0.08647844988324074	0.22690236734730082	7.803820786997186	0.04325790990754176	0.026055662118461137	9.97654151534254e-10	9.001019985878507	-0.16579167108236192	
LT(ph)KTAMRANYK	ddPTM_K562_Methotrexat_30min_R1	1	LTKTAMRANYK	11	2	G3V5N2;G3V2E1;Q9P0W8-3;Q9P0W8-2;Q9P0W8	G3V5N2	SPATA7	Spermatogenesis-associated protein 7	1	LT(0.959)KT(0.041)AMRANYK	51.463	0.033987	6270700.0	1317.1	1233.3	1130.9	1359.9	1133.0	1624.5	1531.5	1356.3	1367.7	1064.7	True	False	1259.2018610510097	1437.081862484346	893.5395446629115	1240.6796783809573	1282.0093591436826	1938.4116338138763	1874.9778603371392	1308.598160241842	1304.115925525839	871.8725128460586	1.4442499820766108	1.6482706374046259	1.024851146810587	1.423005840992738	1.4704091942970101	2.223274165951519	2.150518375922459	1.5009053972468718	1.495764468211993	1.0	9.767973386094493	-8.021405675383436	24.298340643440092	1.7475830390781466	1.3867292486589204	0.11371020185293879	0.35717867662336006	949.7336225277465	1078074.7170512471	0.11916490137344234	0.12039859413662389	9.519065706852053e-09	8.021405675383436	-0.36085379041922616	
LTALAEDRPLFDGPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LTALAEDRPLFDGPSR	16	1	E9PKN0;E9PQ01;O94913	E9PKN0	PCF11	Pre-mRNA cleavage complex 2 protein Pcf11	1	LTALAEDRPLFDGPS(1)R	89.911	0.022454	19435000.0	303.98	271.17	198.62	260.51	262.98	216.4	168.51	285.51	357.71	337.52	True	False	290.6174031753746	315.9762333981029	156.93237630289806	237.6714927678676	297.56647949479776	258.2162373390723	206.3026570325898	275.46845147139146	341.08014017682837	276.39185736432967	1.0514687586917342	1.1432183147913602	0.5677894341729305	0.8599077231663077	1.0766108753433952	0.9342396690026257	0.7464136570443505	0.9966590698374989	1.2340455447181606	1.0	8.110571303644381	-9.528807313898938	23.22492762416345	1.1164662201275748	0.9094208587523056	0.19542295909498308	0.1662923744742943	111.00200641326956	434807.6368575508	0.11449465750450702	0.04362456360586796	2.9593251572996643e-10	9.528807313898938	-0.2070453613752692	
LTATPT(ph)PLGGMTGFHMQTEDR	ddPTM_K562_Methotrexat_30min_R1	4	LTATPTPLGGMTGFHMQTEDR	21	0	O75533	O75533	SF3B1	Splicing factor 3B subunit 1	1	LT(0.024)AT(0.189)PT(0.771)PLGGMT(0.017)GFHMQTEDR;LT(0.045)AT(0.368)PT(0.433)PLGGMT(0.154)GFHMQTEDR;LT(0.028)AT(0.201)PT(0.521)PLGGMT(0.25)GFHMQTEDR;LT(0.018)AT(0.207)PT(0.747)PLGGMT(0.028)GFHMQTEDR	65.67699999999999	0.005479100000000001	139864000.0	13513.0	11743.6	15056.099999999999	14592.900000000001	11418.3	11190.9	11091.9	12431.199999999999	12259.2	13911.8	True	False	12918.984700009338	13684.030292930493	11896.0303637804	13313.563113938873	12920.006589152974	13353.383042688663	13579.54092659061	11993.987649928762	11689.2724677973	11392.238211901766	1.13401637673908	1.2011713623258362	1.0442224032282181	1.1686521003423058	1.134106077210983	1.1721474563916718	1.191999383615742	1.0528210020572017	1.026073388773175	1.0	13.475763598060524	-9.426200567882358	4.465325736402872	1.0197435248457283	1.1481479974194404	0.6512350116173906	0.04183115859926023	0.14187989044808805	4.736537266830785	0.025036052034582694	0.011076638555462502	3.747998704640287e-10	9.426200567882358	0.12840447257371213	
LTEDLEYHELLDR	ddPTM_K562_Methotrexat_30min_R1	1	LTEDLEYHELLDR	13	0	P22059;H0YCV6	P22059	OSBP	Oxysterol-binding protein 1	0		152.16	9.4699e-09	5267800.0	7412.6	5591.5	7351.0	7424.7	5767.0	5527.4	5755.0	7409.5	8573.8	8791.8	False	True	7086.750979596629	6515.400335750607	5808.125557358797	6773.788078590411	6525.461583567183	6595.4918219408	7045.70524730019	7148.903685255424	8175.205909390537	7199.519825716143	0.9843366156564064	0.9049770670091202	0.8067379072438428	0.9408666470220625	0.9063745557389432	0.9161016264421135	0.9786354392876955	0.992969511622161	1.1355209940792603	1.0	12.813684973417176	-9.13211682182832	1.5663312994787628	1.0612478121527276	0.9046158771404899	0.5585731729300045	0.05397922819069828	0.2949471831399046	1.35009773394151	0.03928875155462635	0.01691172797645884	7.377057663403357e-10	9.13211682182832	-0.1566319350122377	
LTEGCS(ph)FR	ddPTM_K562_Methotrexat_30min_R1	4	LTEGCSFR	8	0	C9J1C5;H0YMV8;Q71UM5;P42677	C9J1C5	RPS27L;RPS27	40S ribosomal protein S27;40S ribosomal protein S27-like	1	LTEGCS(1)FR;LTEGCS(1)FR;LTEGCS(1)FR;LTEGCS(1)FR	129.82	0.00020679	411193000.0	21712.2	19549.6	34637.6	21335.0	20838.4	20716.0	20637.6	24549.5	19295.0	22278.9	True	False	20757.757685454213	22779.839113617105	27367.6411108109	19464.593674724427	23579.01485399798	24719.073811073125	25266.107143645913	23686.08017021095	18397.97966149087	18243.97532304506	1.137786985451238	1.2486225567759086	1.5000919824881143	1.0669052840768498	1.292427469149989	1.3549170821256802	1.384901409712541	1.2982959991341165	1.008441380549955	1.0	14.15513250345759	-9.763059099932171	23.519315333791493	1.0042202845405932	1.2899904395590795	0.4889774041913998	0.11494387907363257	16.857086229619156	244692.76868109682	0.0935124202263393	0.02910938871697342	1.725603051422532e-10	9.763059099932171	0.28577015501848635	
LTEGCS(ph)FRR	ddPTM_K562_Methotrexat_30min_R1	1	LTEGCSFRR	9	1	C9J1C5;H0YMV8;Q71UM5;P42677	C9J1C5	RPS27L;RPS27	40S ribosomal protein S27;40S ribosomal protein S27-like	1	LTEGCS(1)FRR	80.24	0.025889999999999996	23713000.0	5319.9	4791.9	8012.7	5452.0	5161.2	5000.4	5545.4	6536.4	4690.6	5578.2	True	False	5086.043565868401	5583.6800266267255	6330.943770024326	4974.031624776076	5839.988265147731	5966.656530454238	6789.097111794689	6306.5111071332085	4472.535029810268	4567.933926136836	1.113423190464083	1.22236444679683	1.3859534468745023	1.088901832908665	1.278474767713352	1.306204648958292	1.4862511633429691	1.3806047130079027	0.9791155262161928	1.0	12.157326067340922	-9.771721597191299	24.99784106624817	0.9895574830434978	1.285156164094413	0.5095371733845009	0.11505055385418617	197.74746843871657	480741.5592030155	0.11307577954863099	0.03051030841855863	1.6915249297156842e-10	9.771721597191299	0.29559868105091514	
LTFDTTFS(ph)PNTGKK	ddPTM_K562_Methotrexat_30min_R1	1	LTFDTTFSPNTGKK	14	1	Q5JSD2;Q5JSD1;A0A0A0MR02;P45880-2;P45880;P45880-1	Q5JSD2	VDAC2	Voltage-dependent anion-selective channel protein 2	1	LT(0.024)FDT(0.184)T(0.149)FS(0.643)PNT(0.001)GKK	75.548	0.028763	40606000.0	2499.4	2235.5	4312.6	3064.9	2067.1	1675.6	1922.5	3040.7	3263.3	5703.1	True	False	2389.529368697059	2604.878377997045	3407.444195166036	2796.204975564232	2338.9598819822645	1999.3859856069753	2353.669563498628	2933.756857514833	3111.5898952756243	4670.2133258310905	0.5116531520049631	0.5577643238670457	0.7296121092197994	0.5987317453141462	0.5008250627536449	0.4281144877362049	0.5039747436119054	0.628184764342163	0.6662629045369998	1.0	12.189272735472716	-10.247390659153172	1.488408622716268	0.9990257265069368	0.5527953890300952	0.7536966039043952	0.0766619928256638	0.48840718620176204	1.9031758182063923	0.08292927690131187	0.024209336786618997	5.657301711247949e-11	10.247390659153172	-0.4462303374768416	
LTIFGNSAVSQPASSSNHSS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	LTIFGNSAVSQPASSSNHSSR	21	0	P46934-2;P46934;H0Y8X6;P46934-4;P46934-3	P46934-2	NEDD4	E3 ubiquitin-protein ligase NEDD4	1	LTIFGNSAVSQPAS(0.013)S(0.013)S(0.043)NHS(0.043)S(0.887)R	143.14	6.1365e-25	0.0	499.98	560.45	769.51	477.77	554.36	513.75	463.46	835.7	624.01	603.48	True	False	478.0014778591482	653.0548364788389	608.0003669763526	435.8846458857786	627.2680567827819	613.0249165108522	567.4027026783222	806.3079573207307	594.9999113017321	494.18392415923745	0.9672542033259769	1.3214813444000448	1.230311908690176	0.8820291890865445	1.26930081315365	1.2404792761193129	1.1481609881253279	1.6315948736950814	1.204004991287433	1.0	8.948904270224972	-7.945219325809838	24.999797501041403	1.2756838047998635	1.1191468610194146	0.11684837130575076	0.189184198787391	187.5290663160001	85579.92576744252	0.05836801787734094	0.06618310547843842	1.1344377613771212e-08	7.945219325809838	-0.1565369437804489	
LTLTSDEST(ph)LIEDGGAR	ddPTM_K562_Methotrexat_30min_R1	4	LTLTSDESTLIEDGGAR	17	0	Q9NRX5	Q9NRX5	SERINC1	Serine incorporator 1	1	LTLTSDES(0.005)T(0.995)LIEDGGAR;LTLTSDES(0.004)T(0.996)LIEDGGAR;LTLTSDES(0.008)T(0.992)LIEDGGAR;LTLTSDES(0.227)T(0.773)LIEDGGAR	317.7	1.878399999999999e-247	53036000.0	6156.299999999999	5417.3	6877.9	6313.400000000001	5370.0	4900.83	5000.16	6334.299999999999	6694.8	7012.2	True	False	5885.676423345477	6312.416746644329	5434.322782064759	5759.914024185851	6076.249124979325	5847.846037146242	6121.573162352824	6111.519078684583	6383.560209264012	5742.222630392725	1.024982276408698	1.0992985038987608	0.9463796741877791	1.0030809313626206	1.0581702445353909	1.018394167825272	1.066063361937981	1.0643124573988525	1.1116880379170224	1.0	12.487393550689088	-8.76741434458154	24.527633657336516	1.0658753494392867	1.025356669515403	0.12806092266352886	0.044460273442003914	222.24102884511126	912299.228694768	0.018314154367968277	0.012718707287540576	1.7083846296381124e-09	8.76741434458154	-0.040518679923883694	
LTMRVNDLVGTS(ph)MT(ph)VLQEQQ	ddPTM_K562_Methotrexat_30min_R1	1	LTMRVNDLVGTSMTVLQEQQ	20	1	H0Y900	H0Y900	CEP63		2	LTMRVNDLVGT(0.034)S(0.971)MT(0.995)VLQEQQ	47.09	0.030083999999999996	0.0	207.51	56.271	276.8	145.31	167.74	141.89	326.96	251.2	251.09	299.56	True	False	198.3881088654583	65.56882630654073	218.703462695812	132.5708979083293	189.80075013482917	169.30823436248141	400.2891029812803	242.36515361848456	239.4168807050398	245.3067812042504	0.8087347112523314	0.2672931664777175	0.8915508231046918	0.540428997753415	0.7737281016165424	0.690189784119787	1.6317897981303116	0.9880083723273979	0.9759896547894187	1.0	7.938443305751445	-8.565394827046957	24.998102759774618	1.1498116709288766	0.6504197464398394	0.500636377222536	0.23841928788045627	114.90384077652624	67558.84667400607	0.08803539650987019	0.06819197508011335	2.7202271628648e-09	8.565394827046957	-0.49939192448903724	
LTPLSHEVISR	ddPTM_K562_Methotrexat_30min_R1	2	LTPLSHEVISR	11	0	H7BZU1;Q2VIR3-2;Q2VIR3;P41091	H7BZU1	EIF2S3;EIF2S3L	Putative eukaryotic translation initiation factor 2 subunit 3-like protein;Eukaryotic translation initiation factor 2 subunit 3	0	;	154.15	7.271899999999999e-08	18246200.0	8538.1	7525.2	9224.8	8996.7	7718.799999999999	7955.1	6994.9	9124.5	8773.4	8979.800000000001	False	True	8162.775347232279	8768.611393470532	7288.6405443508875	8207.97327927786	8733.957494579226	9492.31048824425	8563.684384768043	8803.586163184165	8365.526548956932	7353.471203958902	1.1100574301341752	1.1924451936045875	0.9911836658076376	1.116203905831428	1.1877326030565143	1.290861176301861	1.1645771292553095	1.1972014194391027	1.137629606063211	1.0	12.84420971917778	-7.691548766422364	5.4747475168184625	1.1792625129199625	1.0994609883988815	0.09816551315704225	0.08216753031748518	0.36822292653045885	20.138823818048195	0.024080202623187535	0.030971278677226072	2.0344697347831486e-08	7.691548766422364	-0.07980152452108102	
LTPS(ph)PDIIVLS(ph)DNEASSPR	ddPTM_K562_Methotrexat_30min_R1	1	LTPSPDIIVLSDNEASSPR	19	0	A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34	A0A0U1RRM1	GATAD2B	Transcriptional repressor p66-beta	2	LT(0.205)PS(0.793)PDIIVLS(0.973)DNEAS(0.021)S(0.007)PR	115.74	0.00023566	0.0	443.68	382.45	340.26	546.69	289.69	290.33	507.86	471.07	438.03	601.1	True	False	424.1763584474319	445.64336196151646	268.8440759280239	498.76253649098174	327.7893126657842	346.43216352427396	621.7605329094478	454.5022010949823	417.6660809081547	492.2349652219086	0.8617355296087211	0.9053468230575863	0.5461702132574512	1.0132610881596564	0.6659204157063705	0.7037943015041525	1.2631376818774884	0.9233439987142813	0.8485095745278134	1.0	8.943203331034011	-8.720397220125543	24.999999487566672	1.0023613729937277	0.7826991998116599	0.33041014318080675	0.15753780068180612	179.9319925730121	109601.64003756132	0.05938494191227517	0.04599889512432143	1.9037187172114263e-09	8.720397220125543	-0.21966217318206782	
LTPS(ph)PDIIVLSDNEASSPR	ddPTM_K562_Methotrexat_30min_R1	3	LTPSPDIIVLSDNEASSPR	19	0	A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34	A0A0U1RRM1	GATAD2B	Transcriptional repressor p66-beta	1	LT(0.237)PS(0.763)PDIIVLSDNEASSPR;LT(0.246)PS(0.753)PDIIVLS(0.001)DNEASSPR;LT(0.006)PS(0.983)PDIIVLS(0.01)DNEASSPR	126.07	2.3706e-05	40571400.0	3332.37	2854.35	3674.9	3359.34	3004.31	2695.87	2661.21	3341.29	3329.9	3880.7000000000003	True	False	3185.8830048671725	3325.9828218456128	2903.588710479913	3064.831877911821	3399.42942433271	3216.808723453259	3258.054085346262	3223.7749368387995	3175.0936758123044	3177.867625248145	1.0025222509444212	1.0466083594611346	0.9136908936706214	0.9644303159646249	1.069720273218512	1.0122538452815741	1.0252327880057168	1.0144459483541481	0.9991271035288564	1.0	11.63384331483135	-7.721878121080815	24.99996610387074	1.020713794506461	0.9815753321224762	0.21316301178959873	0.03605314225475499	263.35861794397886	166423.32404766185	0.011105292155652445	0.014336621399472017	1.897238280975136e-08	7.721878121080815	-0.039138462383984884	
LTPSPDIIVLS(ph)DNEASSPR	ddPTM_K562_Methotrexat_30min_R1	4	LTPSPDIIVLSDNEASSPR	19	0	A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34	A0A0U1RRM1	GATAD2B	Transcriptional repressor p66-beta	1	LTPSPDIIVLS(1)DNEASSPR;LTPS(0.011)PDIIVLS(0.988)DNEASSPR;LTPSPDIIVLS(1)DNEASSPR;LTPSPDIIVLS(0.999)DNEASS(0.001)PR	214.34	1.3474999999999999e-27	71084000.0	4421.099999999999	3899.91	5089.79	4776.6	3709.81	3378.74	3583.85	4072.3199999999997	4567.41	4371.179999999999	True	False	4226.7537376756645	4544.303840364331	4021.512635095801	4357.842894149926	4197.715040286696	4031.633686446478	4387.6195917526975	3929.09419738705	4355.0721060217675	3579.516944399771	1.1808167982801447	1.2695299144969796	1.1234791446894927	1.2174388225673474	1.172704335665769	1.1263066355235594	1.225757458312139	1.0976604548650621	1.216664754956774	1.0	11.80554919367669	-15.999999999985725	0.2132589180342446	0.12412553963833	1.2046076807942823	0.5363073621494336	0.050632988498679005	108.02087659764089	1.0786414584172301	40.52781019741364	0.09750275947306661	1.000000000032869e-16	15.999999999985725	1.0804821411559522	
LTPSPDIIVLSDNEASS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	LTPSPDIIVLSDNEASSPR	19	0	A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34	A0A0U1RRM1	GATAD2B	Transcriptional repressor p66-beta	1	LTPSPDIIVLS(0.002)DNEAS(0.244)S(0.753)PR;LTPSPDIIVLSDNEAS(0.431)S(0.568)PR	224.12	7.899499999999999e-45	68459000.0	2984.0	2533.3999999999996	3461.3	3432.1000000000004	2888.2	2673.7	2765.3	3028.8	3168.8	3641.2000000000003	True	False	2852.8269329407126	2952.0012895628333	2734.8204314632003	3131.2131216790085	3268.048924164859	3190.3546847203224	3385.488917525491	2922.275387259819	3021.4831796492495	2981.743396050598	0.9567647359324618	0.9900252628958082	0.9171883922290381	1.050128299378943	1.0960195060693285	1.0699628576174716	1.1354058575294121	0.9800559602581678	1.0133277007174017	1.0	11.541940391654913	-7.2839590458606915	19.82479719961678	1.054839532568628	0.9581961573629635	0.4635740453380498	0.04632235146290441	49.83526444902351	43871.373388212705	0.01359902868092127	0.020218169427058116	5.200450346712564e-08	7.2839590458606915	-0.09664337520566446	
LTPVRPAAASPIVS(ph)GAR	ddPTM_K562_Methotrexat_30min_R1	1	LTPVRPAAASPIVSGAR	17	1	I3VM54;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-3	I3VM54	KDM2A	Lysine-specific demethylase 2A	1	LTPVRPAAAS(0.492)PIVS(0.508)GAR	77.372	0.014458000000000002	231470000.0	2300.9	2048.2	2488.6	2028.0	2001.7	1771.1	2061.8	2260.8	2248.5	2349.0	True	False	2199.75519101987	2386.630236552696	1966.2768687312066	1850.208388673126	2264.958635655703	2113.34000901678	2524.2111344715076	2181.2863825663608	2143.9677257767407	1923.5733377246108	1.1435775012466922	1.2407274470625766	1.0222001054855072	0.9618600717671268	1.1774745424236934	1.0986532031664795	1.3122510511906915	1.1339761992888704	1.1145755057682563	1.0	10.909573119211952														
LTPVS(ph)PESSSTEEK	ddPTM_K562_Methotrexat_30min_R1	4	LTPVSPESSSTEEK	14	0	Q13501;E7EMC7;Q13501-2	Q13501	SQSTM1	Sequestosome-1	1	LT(0.001)PVS(0.833)PES(0.043)S(0.12)S(0.002)TEEK;LT(0.001)PVS(0.92)PES(0.026)S(0.026)S(0.008)T(0.018)EEK;LT(0.053)PVS(0.888)PES(0.053)S(0.005)STEEK;LT(0.001)PVS(0.988)PES(0.003)S(0.006)S(0.002)TEEK	192.32	4.4478e-08	346026000.0	11038.1	8577.5	15354.400000000001	12079.6	8908.3	7054.749999999999	7343.0	9531.9	10491.6	12218.6	True	False	10552.878340647752	9994.786082428835	12131.721270291104	11020.60022278889	10079.897594050906	8417.980593196951	8989.854670881889	9196.657674267652	10003.847805985884	10005.693139345227	1.0546873858394514	0.998909914908993	1.2124818442198402	1.1014329611461657	1.0074162233112953	0.8413190846414289	0.8984739533467428	0.9191424868012174	0.9998155716616887	1.0	13.288533492226222	-7.973042717069961	4.270260436949729	0.9239997290077101	1.0922192249995886	0.5619824457061298	0.06631373812443603	0.15430083537407677	6.524854389814299	0.02237384374582977	0.024750236333172356	1.0640383545959398e-08	7.973042717069961	0.16821949599187846	
LTPYEVDELRR	ddPTM_K562_Methotrexat_30min_R1	2	LTPYEVDELRR	11	1	A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2	A0A1X7SBZ2	DDX17	Probable ATP-dependent RNA helicase DDX17	0	;	125.74	0.0021109	18286100.0	3494.9	2504.4	3237.3999999999996	3422.2	2875.3	2382.22	2553.2	3315.0	3301.0	3960.2000000000003	False	True	3341.268380675099	2918.2095324785505	2557.913981688662	3122.1810393082665	3253.4523480545745	2842.5502999717432	3125.8200933808585	3198.409571040112	3147.5372305043466	3242.9694048773954	1.030311410169292	0.8998572506079122	0.788756741843319	0.9627537757872571	1.0032325137454003	0.8765270173984911	0.9638759122055406	0.986259557746593	0.9705725949096159	1.0	11.663099697712708	-9.164180380231386	0.7880092496952645	0.99832450380126	0.919561696030415	0.12726934284597102	0.06455920530663205	1.3424721339830938	1.5498857662136936	0.06122227897562291	0.02902864354834278	6.852035743203753e-10	9.164180380231386	-0.07876280777084499	
LTRDETNYGIPQR	ddPTM_K562_Methotrexat_30min_R1	2	LTRDETNYGIPQR	13	1	P63244;D6RFX4;D6R9L0;D6R9Z1;D6RFZ9;D6RHH4;D6RBD0;E9PD14;D6R909;D6RAU2;D6RAC2;D6REE5;D6RGK8	P63244	GNB2L1	Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed	0	;	171.49	0.0017695	60321000.0	4203.0	3306.4	4458.9	4782.4	3812.1	4180.7	3495.9	5056.5	4976.2	5351.1	False	True	4018.241152530098	3852.7264008094107	3523.0378244738286	4363.134417155006	4313.457968218564	4988.561106485491	4279.944565427752	4878.660028948515	4744.857548147751	4381.963936780829	0.9169954866132614	0.8792236669204043	0.8039860380644751	0.9957029496596781	0.9843663778272461	1.1384304340373677	0.9767183452842326	1.113350109524767	1.0828152893548273	1.0	12.09736189577216	-7.594815016215261	2.09736539756081	1.0604247954291484	0.8693989113164275	0.6607654154940119	0.05777524304318165	0.17900313493101142	1.5978845081903703	0.018108388561164864	0.02644887109973411	2.5420552402951082e-08	7.594815016215261	-0.1910258841127208	
LTRPAAS(ph)PAVGEK	ddPTM_K562_Methotrexat_30min_R1	1	LTRPAASPAVGEK	13	1	F5H0Q6;A0A0A0MQS2;Q8N2M8-3;Q8N2M8;Q8N2M8-4	F5H0Q6	CLASRP	CLK4-associating serine/arginine rich protein	1	LTRPAAS(1)PAVGEK	98.676	0.015708	33022000.0	2088.9	1564.5	3477.1	2316.4	1857.4	1353.2	1502.2	1979.8	1839.3	2373.4	True	False	1997.0744571782363	1823.007033046915	2747.3042273829756	2113.3248084430106	2101.6806563755313	1614.6867484622578	1839.1065894864191	1910.169311838677	1753.791344461267	1943.5542612837771	1.0275372789741961	0.9379758874561922	1.4135464504954427	1.0873505569363908	1.0813593930674756	0.8307906707969696	0.9462594516253088	0.9828227335299359	0.9023629437044037	1.0	10.924481670904795	-8.095760744266132	5.676184390715859	0.9326669034397425	1.1205821514160947	0.34920092660349855	0.12149475544032318	0.27360065255691035	13.059414640145473	0.04164871910663319	0.041918892592818134	8.021198348692526e-09	8.095760744266132	0.18791524797635228	
LTS(ph)DEEGEPSGKR	ddPTM_K562_Methotrexat_30min_R1	2	LTSDEEGEPSGKR	13	1	Q8WVC0-2;Q8WVC0	Q8WVC0-2	LEO1	RNA polymerase-associated protein LEO1	1	LTS(1)DEEGEPSGKR;LT(0.242)S(0.758)DEEGEPSGKR	145.31	1.4228e-08	17537300.0	5925.3	5343.7	9872.7	7335.0	4901.0	4515.9	3912.5	5518.8	5733.9	8346.6	True	False	5664.8309067538885	6226.655597630422	7800.555188428269	6691.951938322177	5545.567404380574	5388.533762474661	4789.977720254037	5324.700675914383	5467.332240529801	6834.949859792351	0.8288035790983825	0.9110023811966326	1.141274676251283	0.9790784242161918	0.8113545114651435	0.7883794136038281	0.7008065631076273	0.7790401956330006	0.7999081708985502	1.0	12.73871503912923	-7.783999649909552	5.972138416778278	0.7942995209448915	0.974250555850264	0.33617302170026253	0.10225862776350483	0.17341500518375785	19.56095604741561	0.03216493220155619	0.037910284415445465	1.644373048764967e-08	7.783999649909552	0.17995103490537245	
LTSS(ph)LEAGLQR	ddPTM_K562_Methotrexat_30min_R1	2	LTSSLEAGLQR	11	0	B7Z879;A0A087WXL6;Q9H270	B7Z879	VPS11	Vacuolar protein sorting-associated protein 11 homolog	1	LTS(0.02)S(0.98)LEAGLQR;LT(0.004)S(0.296)S(0.7)LEAGLQR	164.48	6.133600000000001e-05	25314000.0	3108.0	3096.0	3522.5	3150.0	2762.3	2700.7	2754.0	2977.5	2993.1000000000004	3879.3	True	False	2971.376041414123	3607.5613769979213	2783.175387810687	2873.8443906905045	3125.5908673985855	3222.572052595345	3371.654604876577	2872.779637336935	2853.951434299472	3176.7211788144227	0.9353594080683731	1.1356241778651444	0.8761157278679994	0.9046574215754892	0.9839046902331795	1.0144333956932394	1.0613630895157458	0.904322247887389	0.8983953182081247	1.0	11.633322754759401	-9.309095906806006	24.983622743887988	0.9260190700339579	0.9865043152704444	0.09138330202829037	0.07538881266364834	963.4843905047554	505095.2029934892	0.04198648593305021	0.020169744733816924	4.907994791772529e-10	9.309095906806006	0.06048524523648646	
LTST(ph)PLQSHSSVEPWLDR	ddPTM_K562_Methotrexat_30min_R1	1	LTSTPLQSHSSVEPWLDR	18	0	A0A494C143;Q14689-3;Q14689-2;Q14689-4;Q14689-5;Q14689-6;Q14689	A0A494C143	DIP2A	Disco-interacting protein 2 homolog A	1	LT(0.002)S(0.183)T(0.815)PLQSHSSVEPWLDR	111.45	0.0016136	15216000.0	1797.9	1469.3	2076.8	2041.6	1388.8	1893.7	1559.6	2228.2	2011.6	2236.4	True	False	1718.8664687446744	1712.0768511702352	1640.9080611512381	1862.6160977884874	1571.4515427879496	2259.6307238863283	1909.3800006410722	2149.832943044217	1918.081155068932	1831.366288840919	0.9385705520617362	0.9348631464947502	0.8960021111832178	1.017063658503481	0.8580760453893302	1.2338496878832799	1.0425986392102524	1.1738956625683314	1.0473498211452257	1.0	10.838704655941655	-8.250597380880668	24.99989277933505	1.1068484865504231	0.932314191690291	0.5740304655298786	0.07332623268021417	487.33096333345435	1123707.0371703906	0.022419684604724717	0.022202913892369624	5.615683450228595e-09	8.250597380880668	-0.17453429486013217	
LTTTGQVT(ph)SPVK	ddPTM_K562_Methotrexat_30min_R1	2	LTTTGQVTSPVK	12	0	K7ENR9;K7ERZ5;P49916-4;P49916-3;P49916-2;P49916	K7ENR9	LIG3	DNA ligase 3	1	LTTTGQVT(0.5)S(0.5)PVK;LTTTGQVT(0.697)S(0.303)PVK	138.2	1.3544000000000001e-05	38597000.0	6353.0	4639.6	8910.4	5855.200000000001	4711.1	4363.2	3891.9	5583.4	5170.1	6544.3	True	False	6073.729726867414	5406.215040284096	7040.228807820679	5341.883706784455	5330.692225826834	5206.326648603697	4764.757645867523	5387.028657298753	4929.743179470017	5359.063854436427	1.1333564764001385	1.0087983997071868	1.3137049677048582	0.9967941886645464	0.9947058610645018	0.9714992748768446	0.8891026073374894	1.0052182253509026	0.9198888674164606	1.0	12.387765290845635	-7.496778225196731	24.37679748665174	0.9635710976976244	1.1405731338104619	0.5481331236150669	0.07677158559452706	408.8313486778931	381831.3844992689	0.020923785319855226	0.030901963948119764	3.18582396448569e-08	7.496778225196731	0.1770020361128375	
LTTTGQVT(ph)SPVKGASFVTSTNPR	ddPTM_K562_Methotrexat_30min_R1	2	LTTTGQVTSPVKGASFVTSTNPR	23	1	K7ENR9;K7ERZ5;P49916-4;P49916-3;P49916-2;P49916	K7ENR9	LIG3	DNA ligase 3	1	LTTTGQVT(0.882)S(0.118)PVKGASFVTSTNPR;LTTTGQVT(0.572)S(0.426)PVKGAS(0.002)FVTSTNPR	139.93	7.5209e-13	575480000.0	3980.7000000000003	2939.9	5231.6	4284.7	2666.8	2595.8999999999996	2598.6	3252.2	3278.2	4413.1	True	False	3805.7131943555946	3425.6685052442467	4133.558654044114	3909.067003425904	3017.5309434813544	3097.520935806368	3181.4021990676397	3137.818282635493	3125.7971975278238	3613.8448261866683	1.0530925862612053	0.9479290534062622	1.143811882594264	1.0816919905082794	0.8349918407164857	0.857126159197841	0.8803372452559501	0.8682769829789623	0.8649505852818167	1.0	11.819318844739195	-7.758608327384587	24.999999570377852	0.8761394329434123	1.0550941287793216	0.6530010852808698	0.06137374883808975	44.5162367387899	393103.42674903874	0.018298840076239428	0.02258214689732159	1.7433784470749393e-08	7.758608327384587	0.17895469583590928	
LTTTGQVTS(ph)PVK	ddPTM_K562_Methotrexat_30min_R1	1	LTTTGQVTSPVK	12	0	K7ENR9;K7ERZ5;P49916-4;P49916-3;P49916-2;P49916	K7ENR9	LIG3	DNA ligase 3	1	LTTTGQVT(0.423)S(0.577)PVK	117.27	0.0013442999999999999	14958000.0	2752.7	2044.2	3343.6	2490.3	1921.9	1592.3	1703.9	2221.3	2418.8	2806.1	True	False	2631.6946039899126	2381.969304541071	2641.8240529975315	2271.97926544018	2174.663536926959	1899.9894395332956	2086.0429488922305	2143.1756199551737	2306.3505159478677	2297.8880983350496	1.1452666497975792	1.0365906443690374	1.1496748057103752	0.9887249370786845	0.9463748641644587	0.826841585937081	0.9078087616205885	0.9326718831556794	1.0036826935214773	1.0	11.166092828552163	-7.480025395050765	3.1887443086815854	0.9267336676259527	1.1028352936592754	0.6580653295970613	0.05562443216849035	0.15240717362423628	3.1097712671847746	0.01694686110562796	0.02515279706759975	3.311117593996328e-08	7.480025395050765	0.1761016260333227	
LTVENS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	LTVENSPK	8	0	F8VVL1;O43583	F8VVL1	DENR	Density-regulated protein	1	LTVENS(1)PK;LT(0.003)VENS(0.997)PK	87.568	0.023704	24755000.0	6936.0	5279.4	10047.0	7405.0	5895.3	5263.8	4651.5	7221.7	7492.1	8885.7	True	False	6631.101744931897	6151.73111554355	7938.272000378702	6755.8151470041885	6670.635282400486	6280.954852612797	5694.717281983804	6967.708717701475	7143.793906289493	7276.413625806547	0.9113145686790006	0.8454345000022819	1.0909594215788951	0.9284539739527722	0.9167476761824526	0.8631937621490822	0.7826269333819762	0.9575745794590045	0.9817740268300987	1.0	12.829011839600211	-9.511300545394676	24.467662525556708	0.9838161681433512	0.9071851224381676	0.17922273621859885	0.07474159498035997	834.0983269811074	1762686.5621027763	0.04754357336253641	0.020705100159311336	3.081055025654028e-10	9.511300545394676	-0.07663104570518353	
LTWHS(ph)CPEDEAQ	ddPTM_K562_Methotrexat_30min_R1	6	LTWHSCPEDEAQ	12	0	Q13185	Q13185	CBX3	Chromobox protein homolog 3	1	LTWHS(1)CPEDEAQ;LTWHS(1)CPEDEAQ;LTWHS(1)CPEDEAQ;LTWHS(1)CPEDEAQ;LTWHS(1)CPEDEAQ;LTWHS(1)CPEDEAQ	125.36	0.00062354	339683000.0	19743.3	15649.8	19483.6	20777.7	15931.7	14453.2	15070.3	21175.6	21098.799999999996	25405.799999999996	True	False	18875.40817195992	18235.663448883093	15394.258619147846	18956.151300460355	18026.997799708228	17246.076347084487	18450.198399372373	20430.84214555567	20117.9213932036	20804.56343276453	0.9072724949485631	0.8765222835757395	0.7399462463559247	0.9111535246448305	0.866492481708028	0.8289564163564287	0.8868342014961808	0.9820365715235199	0.9669956045085975	1.0	14.344612394440468	-9.17333951906415	3.276642625379003	0.9828391585508879	0.8539376817751988	0.6081287282802	0.0459129770975611	0.17761382323653035	3.6394037923787965	0.025343443136931838	0.013108326713743079	6.70904154084386e-10	9.17333951906415	-0.12890147677568908	
LVAIVDVIDQNR	ddPTM_K562_Methotrexat_30min_R1	1	LVAIVDVIDQNR	12	0	E7EPB3;P50914	E7EPB3	RPL14	60S ribosomal protein L14	0		208.63	5.5419e-16	9791900.0	2128.6	1800.1	2184.8	2093.8	1765.1	2387.5	2099.8	2563.1	2647.0	3092.9	False	True	2035.0292927136738	2097.535928531639	1726.2403370585628	1910.239804834216	1997.2415885476753	2848.850585245079	2570.7336017864354	2472.954320221089	2523.941547756743	2532.7458391862287	0.8034873698055423	0.8281667651285441	0.6815687189572893	0.7542169353431752	0.788567710840417	1.1248071327048017	1.0149986477176138	0.9763926099334346	0.9965238156575891	1.0	11.306486594660397	-8.188237349953637	7.117603378085367	1.0202580686406517	0.7670570596583884	0.855314344401153	0.05169116699337585	0.10149612317740553	8.558835899737483	0.01800306733421222	0.017992440718672825	6.4828003970343715e-09	8.188237349953637	-0.2532010089822633	
LVDVS(ph)PDRGS(ph)PPSRVPQALNFSPEESDSTFSK	ddPTM_K562_Methotrexat_30min_R1	2	LVDVSPDRGSPPSRVPQALNFSPEESDSTFSK	32	2	Q9NYZ3	Q9NYZ3	GTSE1	G2 and S phase-expressed protein 1	2	LVDVS(0.611)PDRGS(0.816)PPS(0.433)RVPQALNFS(0.106)PEES(0.025)DS(0.005)T(0.003)FS(0.001)K;LVDVS(0.82)PDRGS(0.578)PPS(0.534)RVPQALNFS(0.043)PEES(0.009)DS(0.01)T(0.005)FS(0.001)K	47.718999999999994	0.009861499999999999	60213000.0	3169.6000000000004	2594.2	4701.7	3725.0	2703.4	2687.3	2445.7	3412.5	3377.3999999999996	4443.1	True	False	3030.268179171879	3022.8474561395387	3714.877422532153	3398.435033435595	3058.9444850035607	3206.5826922425563	2994.2104818978373	3292.4804407765882	3220.3854111800615	3638.4115354807223	0.8328547086061026	0.8308151583903076	1.021016283151523	0.9340436067484541	0.8407362540420816	0.8813139088233704	0.8229444230536251	0.9049224939700429	0.885107520074573	1.0	11.829093018035902	-10.795182527378838	1.7934475798105507	1.0000098798792343	0.8848155854699661	0.2704747001863096	0.057251709633370125	27.225769796871205	58.88544553607327	0.05882339042706722	0.01640561511154855	1.602571712565335e-11	10.795182527378838	-0.1151942944092682	
LVEPHS(ph)PSPSSK	ddPTM_K562_Methotrexat_30min_R1	4	LVEPHSPSPSSK	12	0	O15014	O15014	ZNF609	Zinc finger protein 609	1	LVEPHS(0.997)PS(0.002)PS(0.001)SK;LVEPHS(0.964)PS(0.036)PSSK;LVEPHS(0.892)PS(0.103)PS(0.002)S(0.002)K;LVEPHS(0.718)PS(0.281)PS(0.001)SK	142.1	1.8368000000000001e-06	183561000.0	23243.199999999997	18267.100000000002	30527.5	23729.0	19165.6	16399.1	16210.399999999998	20240.399999999998	20925.9	28221.100000000002	True	False	22221.45675862185	21285.42778738977	24120.19493297111	21648.71541164919	21686.212333278163	19567.99398219585	19845.994846365767	19528.53365963206	19953.059476464994	23109.98532194978	0.9615521796768944	0.9210489531195395	1.0437131221395384	0.9367688949195185	0.9383914369119342	0.8467332934050045	0.8587627629307109	0.8450257924259228	0.8633955927922485	1.0	14.49622872304357	-8.016873603287824	2.645103374070516	0.8719034829827184	0.9684708661107221	0.35147657453576087	0.0521723550977869	0.2695186241268172	3.7887169887405348	0.0174367735597813	0.018782643711238698	9.61892185967764e-09	8.016873603287824	0.09656738312800373	
LVEQLLS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	LVEQLLSPR	9	0	Q99719-2;G3XAH0	Q99719-2	SEPT5		1	LVEQLLS(1)PR;LVEQLLS(1)PR	100.09	0.008212899999999999	95654000.0	5047.299999999999	3909.5	4662.5	5199.1	4371.0	4017.0	4167.9	5610.9	5774.0	5874.700000000001	True	False	4825.4267354663725	4555.478424862199	3683.904966832455	4743.302975123495	4945.863114578145	4793.228398295074	5102.657671628576	5413.561466711606	5505.568000282369	4810.73490299309	1.00305396842053	0.9469402319441717	0.765767609547648	0.9859830297804103	1.0280888916786877	0.9963609500313301	1.0606815329719916	1.125308622460875	1.1444338778378695	1.0	12.232041586124488	-8.1567106661388	1.1130333611479997	1.0928605976621326	0.913052803271991	0.47062845717655655	0.07225168023298398	0.4247030205504242	1.1023478357532774	0.0382387542337675	0.03809505843446079	6.97090772356963e-09	8.1567106661388	-0.1798077943901416	
LVGATATSS(ph)PPPK	ddPTM_K562_Methotrexat_30min_R1	2	LVGATATSSPPPK	13	0	H9KVD1;Q96QD9-4;Q96QD9	H9KVD1	FYTTD1	UAP56-interacting factor	1	LVGATAT(0.003)S(0.019)S(0.978)PPPK;LVGATAT(0.007)S(0.034)S(0.959)PPPK	151.55	1.0589000000000001e-09	69613000.0	7336.8	6008.200000000001	9911.6	6719.6	5534.5	5059.1	4750.9	6865.2	6894.1	8492.0	True	False	7014.283056836272	7000.95292806167	7831.290610028221	6130.503100852033	6262.383758323663	6036.699474686235	5816.410262276009	6623.747024767596	6573.594795764929	6954.016510837547	1.0086664370015233	1.0067495406648768	1.1261535830154383	0.8815773001542199	0.9005419743487806	0.8680881710991466	0.8364101887321341	0.9525066577631445	0.9452946776183596	1.0	12.763630777105133	-7.277547261280713	24.990633124177183	0.9046168238697616	1.0431458252459733	0.5667152149319359	0.05383660357687106	548.8332299527592	851487.7222289772	0.015313993212355171	0.022801636680704323	5.2777976901498294e-08	7.277547261280713	0.1385290013762117	
LVGATATSS(ph)PPPKAR	ddPTM_K562_Methotrexat_30min_R1	2	LVGATATSSPPPKAR	15	1	H9KVD1;Q96QD9-4;Q96QD9	H9KVD1	FYTTD1	UAP56-interacting factor	1	LVGATAT(0.06)S(0.321)S(0.619)PPPKAR;LVGATAT(0.083)S(0.186)S(0.731)PPPKAR	101.43	0.006336100000000001	84254000.0	3451.7	2295.5699999999997	4013.8	4158.5	2365.5	2273.1	2215.11	2322.8	2590.04	3504.7	True	False	3299.9674009488817	2674.873924481627	3171.358231822438	3793.930761487768	2676.604712316313	2712.3444043227596	2711.9048045781274	2241.1058074244274	2469.629605724167	2869.964868762639	1.1498285002950697	0.9320232291327232	1.1050163945699245	1.3219432763034096	0.9326262984781094	0.9450793052711352	0.9449261327534445	0.7808826622991595	0.8605086538180959	1.0	11.486817361642448	-7.9702770739491156	24.977604678708303	0.8998724260669443	1.113627851652356	0.510457848255941	0.10371465621933461	180.33681908470555	151545.01211199982	0.033717895076160576	0.038232032054985064	1.070835908574628e-08	7.9702770739491156	0.2137554255854116	
LVGS(ph)QEELASWGHEYVR	ddPTM_K562_Methotrexat_30min_R1	2	LVGSQEELASWGHEYVR	17	0	Q13200;Q13200-3;H7C2Q3	Q13200	PSMD2	26S proteasome non-ATPase regulatory subunit 2	1	LVGS(1)QEELASWGHEYVR;LVGS(1)QEELASWGHEYVR	196.98	6.7089e-12	43077000.0	3113.23	3013.24	3701.7	4295.6	3088.2400000000002	2843.13	3025.14	3810.1800000000003	3707.2200000000003	4174.3	True	False	2976.3761368763476	3511.1266936773945	2924.7637567235834	3919.0114173492493	3494.397690451798	3392.5246343153294	3703.604651923143	3676.173809769416	3534.872151369382	3418.2938202059777	0.8707198074321765	1.027157663546261	0.855620935636055	1.1464817313782287	1.022263700620456	0.9924613894398652	1.083465859497114	1.0754411420221037	1.0341042453619098	1.0	11.739060694179255	-7.255195307985964	24.99996316766493	1.0515119291503283	0.9287652918136823	0.5023418284082262	0.06025968949342087	436.8531107944448	1749063.8204954758	0.01574297392865164	0.026464961442865486	5.556543159614453e-08	7.255195307985964	-0.12274663733664604	
LVHDS(ph)LEDLQMTR	ddPTM_K562_Methotrexat_30min_R1	3	LVHDSLEDLQMTR	13	0	A0A087WYY3;A0A2R8Y635;A0A2R8YDN7;Q9H7F0-2;Q9H7F0	A0A087WYY3	ATP13A3	Probable cation-transporting ATPase 13A3	1	LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR	140.49	7.2538e-06	119782000.0	7315.1	6502.1	7922.200000000001	7601.0	7121.799999999999	6150.700000000001	6579.9	9393.1	8906.3	9532.9	True	False	6993.536962853426	7576.461508197088	6259.438483268653	6934.632131313814	8058.4415304055465	7339.23572551494	8055.610070670802	9062.739348940242	8492.248056964812	7806.399434310316	0.8958722932003409	0.9705449448176305	0.8018342561049934	0.888326582526004	1.0322866000152986	0.9401563149917592	1.0319238899389604	1.1609371804763309	1.0878572289857584	1.0	12.930441568493967	-8.447906544285004	1.0840812145299463	1.0907567422949478	0.894575480148643	0.566714814388773	0.06552533190849111	0.3603697907861836	0.8739021985056443	0.03989075067069774	0.0302385896022266	3.5652784630523197e-09	8.447906544285004	-0.19618126214630482	
LVHSGSGCRS(ph)PSLGSDLTFATR	ddPTM_K562_Methotrexat_30min_R1	1	LVHSGSGCRSPSLGSDLTFATR	22	1	Q13425	Q13425	SNTB2	Beta-2-syntrophin	1	LVHS(0.059)GS(0.059)GCRS(0.664)PS(0.209)LGS(0.008)DLTFATR	56.488	0.020372	25621000.0	1529.6	1012.3	1442.8	1500.3	965.29	1017.7	1322.1	1924.0	1559.4	1614.9	True	False	1462.3606154913255	1179.5653688420525	1139.9759970286048	1368.7710283660197	1092.2425545346916	1214.3561217189188	1618.6145799227752	1856.3318294664186	1486.903834367912	1322.4259612990527	1.105816626629752	0.8919708198131073	0.862033891038238	1.0350454909562128	0.8259385300192942	0.9182791001214358	1.2239736872170666	1.4037321436452266	1.1243758651768212	1.0	10.36897123705298	-8.762972552054595	24.956628289199514	1.2216648285863743	0.9332837098657273	0.4874259152663406	0.12264125410486881	29.185227436397845	475054.15292590344	0.047763398955846775	0.034153857721308	1.7259469705145357e-09	8.762972552054595	-0.288381118720647	
LVINGNPITIFQERDPSK	ddPTM_K562_Methotrexat_30min_R1	2	LVINGNPITIFQERDPSK	18	1	P04406;P04406-2	P04406	GAPDH	Glyceraldehyde-3-phosphate dehydrogenase	0	;	146.1	1.8890000000000002e-11	18614700.0	4650.4	3514.8999999999996	5618.4	4652.9	4083.5	3271.8999999999996	3203.8	4676.0	4570.3	5521.3	False	True	4445.973984231736	4095.6774819153743	4439.174619978867	4244.987481093287	4620.5518252985285	3904.1483685291637	3922.333704830642	4511.542429617967	4357.827750552567	4521.339067509106	0.9833312471920205	0.9058549736619871	0.9818274085832928	0.9388783760099491	1.0219432244094184	0.8634938256643591	0.8675159385893021	0.9978332441462887	0.9638356437075132	1.0	12.142534397999432														
LVLAES(ph)PQPK	ddPTM_K562_Methotrexat_30min_R1	1	LVLAESPQPK	10	0	E7EUR8;A0A1B0GVL4;P78312-4;P78312-6;P78312-2;P78312-5;P78312	E7EUR8	FAM193A	Protein FAM193A	1	LVLAES(1)PQPK	119.45	0.0038640999999999997	19539000.0	4064.7	3403.3	5205.9	4415.1	3038.0	2672.2	3194.9	3557.9	3749.1	4843.6	True	False	3886.0206549343575	3965.6374787910295	4113.25273283283	4028.0350378849685	3437.5502498486417	3188.5648309494863	3911.4376532753017	3432.7666403630824	3574.805159310467	3966.377104556374	0.9797405926103933	0.9998135261106427	1.0370301724734474	1.0155451515837375	0.8666725727868279	0.8038985570198618	0.9861487070359597	0.865466532776143	0.9012771768987652	1.0	11.953606133436574	-7.754090114785095	24.994926047550113	0.8962952199204454	1.0095165983562182	0.452961847659208	0.055670737685285375	143.70913805842116	488753.7356955781	0.01629173102577325	0.020604783384953005	1.761610479665271e-08	7.754090114785095	0.11322137843577285	
LVLEVAQHLGESTVR	ddPTM_K562_Methotrexat_30min_R1	2	LVLEVAQHLGESTVR	15	0	P06576	P06576	ATP5B	ATP synthase subunit beta, mitochondrial	0	;	130.66	0.00033959	9450400.0	5095.1	4489.1	5072.1	5090.0	4439.8	4902.700000000001	4440.6	4925.1	4932.9	6134.5	False	True	4871.12550470048	5230.847473346696	4007.535524347645	4643.767602734813	5023.71152049967	5850.0773881805435	5436.517588385961	4751.881441426748	4703.570555696727	5023.48260547962	0.9696710205360421	1.0412791053841575	0.7977604062918863	0.9244120000872277	1.000045568988295	1.164546162019009	1.0822208446498454	0.9459336907513904	0.9363166800987958	1.0	12.294472165900503	-7.8721487062292566	4.9274888417016	1.0313362267899324	0.9317685910903667	0.21407655829119088	0.08323568759539648	0.3458922722702354	13.528757893009608	0.028553743994499083	0.03274824793441121	1.3423052653767952e-08	7.8721487062292566	-0.09956763569956573	
LVLVS(ph)PTSEQYDSLLR	ddPTM_K562_Methotrexat_30min_R1	1	LVLVSPTSEQYDSLLR	16	0	O00178	O00178	GTPBP1	GTP-binding protein 1	1	LVLVS(0.565)PT(0.182)S(0.254)EQYDSLLR	104.16	0.0011792999999999999	5046000.0	933.66	772.84	819.79	1111.3	908.53	857.62	931.71	1030.7	917.12	1302.3	True	False	892.6174243329183	900.5386739661091	647.7272820932072	1013.8740544045577	1028.0176196494356	1023.3429272954492	1140.6696847892372	994.4496967936783	874.4832913784146	1066.4408504549858	0.8370060317476514	0.844433775752217	0.6073729094462774	0.9507081934942748	0.9639705935972376	0.9595871415267435	1.0696042675996351	0.9324940022406369	0.8200016822361272	1.0	10.05858823428643	-7.396424640865084	10.398547355711228	0.9596781228992547	0.7712131682463315	0.5270629900611243	0.08397312034352543	0.3356928248190418	26.62405894490317	0.02406776813004424	0.03570506046238008	4.013981431553659e-08	7.396424640865084	-0.18846495465292323	
LVPLLDTGDIIIDGGNSEYRDTTRR	ddPTM_K562_Methotrexat_30min_R1	2	LVPLLDTGDIIIDGGNSEYRDTTRR	25	2	P52209-2;P52209;K7EMN2;K7EM49	P52209-2	PGD	6-phosphogluconate dehydrogenase, decarboxylating	0	;	60.325	0.017584	26386000.0	3730.3	3033.6	3791.1	4222.7	2802.7	2887.1	3408.1	3900.2	4012.3999999999996	5330.9	False	True	3566.3204785351	3534.850837616568	2995.3999184468676	3852.5024471646966	3171.304175526919	3444.9912145177263	4172.45318042116	3763.0277553455944	3825.864399780561	4365.422352522828	0.816947408645141	0.809738566435327	0.6861649747854961	0.882503944879077	0.7264598747688608	0.789154161114978	0.9557959902802649	0.8620077168869805	0.8764018898582745	1.0	12.091905525323961	-8.747065752610888	24.465466759872562	0.9120520286495865	0.7835351451604418	0.5458337086652976	0.0614749378246628	145.03566279266866	246866.57810132322	0.02267526409593338	0.017476257652260744	1.790334775072561e-09	8.747065752610888	-0.1285168834891447	
LVPRPGSGSSSGSSNSGSQPGSHPGS(ph)QSGSGERFR	ddPTM_K562_Methotrexat_30min_R1	1	LVPRPGSGSSSGSSNSGSQPGSHPGSQSGSGERFR	35	2	C9J840;A0A0D9SG62;G5E948;A0A0D9SEY1;O95819-2;O95819-3;E7EX83;H7C0P6;E7ENQ1;G3XAA2;H7C360;O95819-4;O95819;O95819-5;O95819-6;E7EN19	C9J840	MAP4K4	Mitogen-activated protein kinase kinase kinase kinase 4	1	LVPRPGSGSSSGSSNSGSQPGS(0.009)HPGS(0.346)QS(0.346)GS(0.297)GERFR	42.218	0.014409	17712000.0	428.62	274.96	457.41	269.26	359.77	278.26	251.28	532.32	272.06	497.64	True	False	409.77837801509673	320.3924664791178	361.4058918774977	245.65439385311907	407.0860610230564	332.0298068482914	307.63593649723555	513.598003878152	259.41198998213036	407.5125737698063	1.0055600842553887	0.78621492219305	0.8868582594500432	0.6028142679884109	0.9989533752472854	0.8147719315179874	0.7549115200332724	1.2603243112892775	0.63657419839189	1.0	8.670700764052148														
LVPRPGSGSSSGSSNSGSQPGSHPGSQSGS(ph)GER	ddPTM_K562_Methotrexat_30min_R1	1	LVPRPGSGSSSGSSNSGSQPGSHPGSQSGSGER	33	1	C9J840;A0A0D9SG62;G5E948;A0A0D9SEY1;O95819-2;O95819-3;E7EX83;H7C0P6;E7ENQ1;G3XAA2;H7C360;O95819-4;O95819;O95819-5;O95819-6;E7EN19	C9J840	MAP4K4	Mitogen-activated protein kinase kinase kinase kinase 4	1	LVPRPGSGSSSGSSNSGS(0.001)QPGS(0.014)HPGS(0.049)QS(0.348)GS(0.588)GER	82.605	6.0685e-08	0.0	62.965	140.37	264.8	196.95	0.0	126.2	161.77	174.1	0.0	287.96	True	False	60.19713399216223	163.5637566179581	209.22209870610925	179.68369928460154	0.0	150.58636391955147	198.05104046146846	167.97680431918062	0.0	235.80765361054875	0.2552806623129443	0.693632094266516	0.887257455399021	0.7619926517794903	0.0	0.6385982881126258	0.8398838520676783	0.7123467018445675	0.0	1.0	7.881466734414662														
LVPTGPTHREPS(ph)PVR	ddPTM_K562_Methotrexat_30min_R1	2	LVPTGPTHREPSPVR	15	1	Q9C0B5-2;Q9C0B5	Q9C0B5-2	ZDHHC5	Palmitoyltransferase ZDHHC5	1	LVPTGPT(0.14)HREPS(0.86)PVR;LVPT(0.002)GPT(0.393)HREPS(0.604)PVR	86.411	0.012950999999999999	97364000.0	2770.7	2469.3	2807.6	2641.6000000000004	2738.6	2526.2	2394.8	3372.1	2713.5	3302.8	True	False	2648.903345542505	2877.3098540765395	2218.3231281241397	2410.015029348584	3098.773901986663	3014.3523972549183	2931.8948612049503	3253.501331675523	2587.3499772715963	2704.6309152136414	0.9793954992684337	1.0638456574209714	0.8201943990383295	0.8910698372159274	1.1457289364533823	1.1145152487531969	1.08402771140156	1.2029372708026322	0.9566369898079861	1.0	11.401216016192457	-7.7609873122930155	24.99999972786577	1.0956509411436794	0.939111150125551	0.3943441975773473	0.08752932412755816	11.976249710485206	662275.2596584208	0.026622662773806524	0.0322930614817365	1.7338546507542157e-08	7.7609873122930155	-0.15653979101812843	
LVPTGPTHREPS(ph)PVRYDNLSR	ddPTM_K562_Methotrexat_30min_R1	2	LVPTGPTHREPSPVRYDNLSR	21	2	Q9C0B5-2;Q9C0B5	Q9C0B5-2	ZDHHC5	Palmitoyltransferase ZDHHC5	1	LVPT(0.045)GPT(0.147)HREPS(0.697)PVRY(0.109)DNLS(0.002)R;LVPTGPTHREPS(0.939)PVRY(0.058)DNLS(0.003)R	67.153	0.006688500000000001	794630000.0	2412.72	1808.79	2291.2	2589.44	1961.03	2012.4299999999998	2097.67	2612.2	2669.77	2946.79	True	False	2306.659717709357	2107.6618033268956	1810.308431100595	2362.427815564959	2218.9398177948256	2401.3036160271217	2568.125895065888	2520.327445390946	2545.6529754267153	2413.0977760210762	0.9558915269122567	0.8734257783794365	0.7502010275296792	0.9790021104989511	0.9195399539315828	0.9951124400713668	1.064244441557787	1.0444365207391968	1.0549315492819389	1.0	11.236670657788428	-8.100198324215054	1.3053525929562972	1.0452239577331572	0.870639978394047	0.5934880770603768	0.058167575578340736	0.29606736751162915	1.0363295818090956	0.02659530288290456	0.027555112261927705	7.939655808892595e-09	8.100198324215054	-0.17458397933911018	
LVPTGPTHREPSPVRY(ph)DNLSR	ddPTM_K562_Methotrexat_30min_R1	1	LVPTGPTHREPSPVRYDNLSR	21	2	Q9C0B5-2;Q9C0B5	Q9C0B5-2	ZDHHC5	Palmitoyltransferase ZDHHC5	1	LVPTGPTHREPS(0.156)PVRY(0.752)DNLS(0.091)R	66.893	0.008739499999999999	12194000.0	670.31	635.74	701.81	877.91	588.99	402.32	384.27	644.89	751.86	820.33	True	False	640.8439750065317	740.7852292676546	554.5096718011121	800.9449933432062	666.4525087749671	480.0626460547853	470.4523293449251	622.2088531728683	716.9061927073607	671.7602878397743	0.9539771650797305	1.102752339900664	0.8254576548195294	1.1923077440598044	0.9920987007405934	0.7146338578580699	0.7003276881070046	0.9262364334958652	1.0672053791878129	1.0	9.391802700693882	-8.026334676340834	24.50261217695868	0.8643614610824147	1.0210063196004926	0.18117432009806522	0.13836769569564097	908.7631738767764	845539.7001597678	0.046684482262507224	0.046843199307204646	9.411640364540954e-09	8.026334676340834	0.15664485851807786	
LVPVS(ph)PLPPK	ddPTM_K562_Methotrexat_30min_R1	2	LVPVSPLPPK	10	0	O95396	O95396	MOCS3	Adenylyltransferase and sulfurtransferase MOCS3;Molybdopterin-synthase adenylyltransferase;Molybdopterin-synthase sulfurtransferase	1	LVPVS(1)PLPPK;LVPVS(1)PLPPK	117.14	0.0034378	14531000.0	9929.7	7423.700000000001	12159.9	10596.3	7428.2	6609.5	6790.3	8617.7	8084.1	10429.1	True	False	9493.20227748707	8650.34024367554	9607.703164865621	9667.33883081708	8405.138500963027	7886.692332220878	8313.197626540828	8314.610606441145	7708.271955504446	8540.288929954768	1.1115785842080812	1.012886134722535	1.1249857286639255	1.1319685914734363	0.9841749582361663	0.9234690297840601	0.9734094121081285	0.973574860831457	0.9025774208256525	1.0	13.060069163730537	-7.8814821313906105	5.328557539037861	0.9542213332838299	1.0909952473351903	0.7370778231591685	0.03996077623326379	0.10992958776208744	4.692952145722344	0.01256642501592115	0.014361752847407136	1.31376554740938e-08	7.8814821313906105	0.1367739140513604	
LVREDENDAS(ph)DDEDDDEKRR	ddPTM_K562_Methotrexat_30min_R1	3	LVREDENDASDDEDDDEKRR	20	3	Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4	Q9Y5B6-2	PAXBP1	PAX3- and PAX7-binding protein 1	1	LVREDENDAS(1)DDEDDDEKRR;LVREDENDAS(1)DDEDDDEKRR;LVREDENDAS(1)DDEDDDEKRR	67.55199999999999	0.015305000000000001	20765000.0	3008.1	2499.78	4829.11	3159.04	2508.77	2510.79	2466.5699999999997	2898.38	3453.6	3915.58	True	False	2875.8675257972372	2912.8261560051264	3815.545804692819	2882.091867926008	2838.717228542715	2995.9646328492126	3019.761110657378	2796.442332582578	3293.0428898121227	3206.430519254034	0.8969062353068853	0.9084326444980277	1.1899667813729808	0.8988474412963476	0.8853200502854288	0.934361313884392	0.9417827994476288	0.8721356398619737	1.0270120840099284	1.0	11.646752430146327	-6.554754946063276	24.999749272806408	0.9626374430169361	0.8997859742847673	0.0807517326192474	0.0875780518259743	480.71159680080024	377008.8202393882	0.022871221456050236	0.0605123599311034	2.7876937021264264e-07	6.554754946063276	-0.06285146873216885	
LVRFPEDLENDIR	ddPTM_K562_Methotrexat_30min_R1	1	LVRFPEDLENDIR	13	1	F8W9G7;O14929	F8W9G7	HAT1	Histone acetyltransferase type B catalytic subunit	0		111.72	0.0050762	5243500.0	2191.3	1791.9	2368.2	2803.5	2167.5	2056.5	2417.9	2681.8	2378.8	2983.7	False	True	2094.9730757885354	2087.9810179078086	1871.1471833678531	2557.7215077145493	2452.5642417863496	2453.889519814244	2960.1756242306046	2587.4795739412907	2268.210107217128	2443.3230173558636	0.8574277984970204	0.854566098332507	0.7658206344705037	1.046820862221683	1.0037822360632802	1.0043246440946705	1.2115367486015307	1.0590002040505604	0.9283300206747773	1.0	11.254628891096353	-7.271478063707885	24.639655682042186	1.0433345107153429	0.8288009698276783	0.6393388936466758	0.07224229536047852	350.33690999449163	859891.0273021843	0.021282026808113898	0.03200207755380469	5.352071864994763e-08	7.271478063707885	-0.21453354088766463	
LVRLS(ph)SDSFAR	ddPTM_K562_Methotrexat_30min_R1	1	LVRLSSDSFAR	11	1	A0A087WSV0;Q9HB09-3;Q9HB09	A0A087WSV0	BCL2L12	Bcl-2-like protein 12	1	LVRLS(0.96)S(0.036)DS(0.003)FAR	113.95	0.0053395000000000005	28856000.0	1953.3	1695.5	2192.0	2178.6	1687.5	1816.7	1632.2	2045.7	2563.9	2296.2	True	False	1867.435270815381	1975.6525564276399	1731.929155452385	1987.6055204947097	1909.4358283803747	2167.7515636501503	1998.2623987216973	1973.751571486201	2444.7048486186295	1880.3359293670708	0.9931391735113884	1.0506912757299984	0.921074329540339	1.057048099465794	1.0154759043630566	1.1528533438064041	1.0627156390051649	1.0496802941751873	1.3001426024133504	1.0	10.876774712702044	-8.192899031605235	6.88810380216291	1.1129081088245463	1.0072440315455986	0.2909156889217024	0.08244208893144228	0.34131656613592787	29.188368188876623	0.026374235224588313	0.026338315569723485	6.4135866765310135e-09	8.192899031605235	-0.10566407727894767	
LVS(ph)FHDDSDEDLLHI	ddPTM_K562_Methotrexat_30min_R1	2	LVSFHDDSDEDLLHI	15	0	P11717	P11717	IGF2R	Cation-independent mannose-6-phosphate receptor	1	LVS(1)FHDDSDEDLLHI;LVS(1)FHDDSDEDLLHI	117.0	0.00069481	6979600.0	3062.1	2792.5	3624.8	3433.2	2873.9	2817.0	2749.8	3116.3	2976.9	3849.5	True	False	2927.493750455015	3253.91316061586	2864.0040158229012	3132.2166863868692	3251.8682235154747	3361.3453816273877	3366.512647962824	3006.6979626643474	2838.504568763523	3152.3182475823282	0.9286796321089272	1.0322286346283247	0.9085389833401023	0.9936232449845837	1.0315799256656577	1.0663090201014358	1.0679482157440074	0.9538053351593976	0.9004498739746583	1.0	11.622197476509577	-6.239096193220046	22.870783921155798	0.9964141976039229	0.9286794011962258	0.11164296158444842	0.05593663656962253	4429.2814169680305	4533645.664505513	0.014968782028858535	0.6309324990087344	5.766387277617919e-07	6.239096193220046	-0.06773479640769708	
LVSFHDDS(ph)DEDLLHI	ddPTM_K562_Methotrexat_30min_R1	15	LVSFHDDSDEDLLHI	15	0	P11717	P11717	IGF2R	Cation-independent mannose-6-phosphate receptor	1	LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVS(0.009)FHDDS(0.991)DEDLLHI;LVS(0.005)FHDDS(0.995)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI	219.35	3.5499000000000006e-27	1585272500.0	51488.869999999995	46647.5	57144.57	58228.96	50958.41	46713.74	49197.94	56196.310000000005	54645.82999999999	61412.51	True	False	49225.48092583214	54355.20650307185	45150.705683754415	53124.117483092596	57660.33411039808	55740.509125858196	60231.83041083574	54219.85392492828	52105.357290763764	50290.10933961089	0.9788302624957668	1.080832935478609	0.8978048820464894	1.0563531911283697	1.1465541607996077	1.108379159596583	1.1976874021905193	1.0781415001263903	1.036095526038618	1.0	15.617987069644272	-7.517540033297472	24.112942600828767	1.1039858640114588	0.992282931204528	0.34456394951916847	0.06606784964726103	154.7475108061063	698938.4310255706	0.019005826267548848	0.02533058895924348	3.037106118375628e-08	7.517540033297472	-0.11170293280693078	
LVSFHDDSDEDLLHI	ddPTM_K562_Methotrexat_30min_R1	4	LVSFHDDSDEDLLHI	15	0	P11717	P11717	IGF2R	Cation-independent mannose-6-phosphate receptor	0	;;;	177.16	8.15e-09	21643700.0	9135.2	8241.7	10234.900000000001	9826.4	8286.599999999999	8273.599999999999	8413.1	10326.3	9634.5	11327.599999999999	False	True	8733.627546179623	9603.500840052893	8086.734358184125	8964.934768470219	9376.433146937374	9872.356105584788	10299.951835979353	9963.11817599744	9186.594197907945	9276.061873311744	0.9415232094675042	1.0352993512994157	0.8717852973200355	0.9664591386850628	1.0108204618507783	1.0642831236376988	1.1103798116756263	1.0740676713964612	0.9903549936788145	1.0	13.17929672776182	-7.9280370491031045	2.8192515276272165	1.0556532806359227	0.953213165826022	0.4423874703174645	0.049431110485571673	0.24148882905320396	3.895328065073724	0.01681085879260157	0.019113705267674534	1.1802199483127595e-08	7.9280370491031045	-0.10244011480990067	
LVSPETEASEES(ph)LQFNLEKPATGER	ddPTM_K562_Methotrexat_30min_R1	1	LVSPETEASEESLQFNLEKPATGER	25	1	A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	LVS(0.001)PET(0.046)EAS(0.216)EES(0.736)LQFNLEKPAT(0.001)GER	49.577	0.02226	15612000.0	451.33	454.55	748.3	770.12	528.28	478.61	441.43	594.72	441.65	731.3	True	False	431.49007360728314	529.6566614710614	591.2420561245523	702.604775288435	597.7580796543909	571.0946088394335	540.4319143902208	573.8033605094951	421.11778789828656	598.8544835581132	0.7205257461605212	0.8844496885521993	0.9872883519409733	1.1732479167791916	0.9981691647406429	0.9536450415237046	0.9024427957510264	0.9581682633487586	0.7032055356690354	1.0	9.226061673000293														
LVST(ph)AT(ph)TAPPSTAPSGPGSVQK	ddPTM_K562_Methotrexat_30min_R1	1	LVSTATTAPPSTAPSGPGSVQK	22	0	J3KR72;P49848-4;P49848-2;P49848;P49848-3	J3KR72	TAF6	Transcription initiation factor TFIID subunit 6	2	LVS(0.464)T(0.51)AT(0.51)T(0.51)APPS(0.001)T(0.001)APS(0.004)GPGSVQK	50.957	0.024368	0.0	299.93	260.58	294.56	97.76100000000001	247.51	173.15	123.04	332.02	311.41	223.16	True	False	286.7454363260417	303.6364158973251	232.7358814005723	89.19044491374424	280.06190333773435	206.60878694667463	150.6348520639122	320.3426684092724	296.93261707099634	182.74356153538704	1.5691137565495867	1.6615437137495428	1.2735654238385006	0.4880634051584527	1.5325404681001704	1.13059406969403	0.8242963571372817	1.7529628169539655	1.6248595276145879	1.0	7.513676767473107	-6.819301149378546	5.738199141327621	1.1972854632105057	1.615219848677768	0.17475261506279072	0.36004408334052257	0.32387587462077355	21.480721669282705	0.09848310016874176	0.21562896592594671	1.5159987758940712e-07	6.819301149378546	0.41793438546726236	
LVTLTTT(ph)VTELEEDLGT(ph)AR	ddPTM_K562_Methotrexat_30min_R1	1	LVTLTTTVTELEEDLGTAR	19	0	B1APN9;O75335	B1APN9	PPFIA4	Liprin-alpha-4	2	LVT(0.035)LT(0.041)T(0.419)T(0.505)VT(0.001)ELEEDLGT(0.999)AR	63.522	0.024243999999999998	24222000.0	709.6	374.19	813.86	715.02	484.48	410.06	496.21	618.44	775.96	736.87	True	False	678.4068336510493	436.0185373575105	643.0419080549627	652.3353067401662	548.1976119310959	489.2982915122923	607.4977238510559	596.6891146648711	739.8857889676315	603.4157025837094	1.124277725531905	0.7225840088193983	1.065669828116142	1.0810711487072553	0.9084907959534692	0.8108809389898399	1.0067648575432626	0.9888524811501651	1.2261626368017662	1.0	9.23700842975434	-9.589232691657582	8.341989469871795	1.1130610766343285	0.9550620121822019	0.18309667150884468	0.12728358100915457	0.43660388544982326	48.75478847023357	0.08435910750311874	0.0316147458098199	2.574941153586734e-10	9.589232691657582	-0.15799906445212664	
LVTSGAESGNLNT(ph)SPSSNQTR	ddPTM_K562_Methotrexat_30min_R1	1	LVTSGAESGNLNTSPSSNQTR	21	0	Q8NHV4-2;Q8NHV4;Q8NHV4-3	Q8NHV4-2	NEDD1	Protein NEDD1	1	LVTSGAESGNLNT(0.922)S(0.073)PS(0.004)S(0.001)NQTR	143.69	1.8211e-13	39474000.0	935.62	690.85	1291.8	1250.3	1085.6	906.62	874.57	996.32	986.49	993.68	True	False	894.4912650797559	805.0012200578207	1020.6688334915102	1140.6881402159804	1228.3754283198425	1081.8114838093793	1070.714585253054	961.2788608804478	940.6282952197012	813.7149230439295	1.099268601015279	0.9892914548580322	1.254332204789131	1.4018277260406085	1.5095894072149478	1.329472341200969	1.3158350116620021	1.1813459894338842	1.1559678562868387	1.0	9.668379638877841	-9.950162523002618	1.5564433114191067	1.0052754106425388	1.274232892279442	0.2618362216744987	0.13878392532047923	0.6062168006455034	3.307118973904167	0.15305903997089312	0.045161580364131135	1.121598647697136e-10	9.950162523002618	0.26895748163690314	
LVTSGAESGNLNTS(ph)PSSNQTR	ddPTM_K562_Methotrexat_30min_R1	1	LVTSGAESGNLNTSPSSNQTR	21	0	Q8NHV4-2;Q8NHV4;Q8NHV4-3	Q8NHV4-2	NEDD1	Protein NEDD1	1	LVTSGAESGNLNT(0.079)S(0.903)PS(0.009)S(0.009)NQTR	242.94	7.414999999999999e-77	41020000.0	1844.5	2152.7	2381.6	2218.8	2425.5	2135.4	2143.2	2248.4	2434.1	2488.3	True	False	1763.41798854194	2508.3970853564033	1881.73470648969	2024.281248909236	2744.4957639920594	2548.0358281601443	2623.867156561905	2169.322497594748	2320.9392222873776	2037.6447578800132	0.8654197360567494	1.2310276733252392	0.9234851655140646	0.9934416885381528	1.3468960933344738	1.2504808889313697	1.28769607480148	1.064622520292366	1.1390303502667987	1.0	10.992686839248607	-6.249566223070816	24.01837652861722	1.1430207417236848	0.8654194432564095	0.27029850317833237	0.13378188474002872	1546.4236032965773	3128184.041181084	0.035255526796135035	0.5469459987912202	5.629032769625491e-07	6.249566223070816	-0.2776012984672753	
LY(ph)FGY(ph)S(ph)LLGAHPILNQT(ph)IGR	ddPTM_K562_Methotrexat_30min_R1	1	LYFGYSLLGAHPILNQTIGR	20	0	B7Z4T2;B7Z3R9;E9PDB7;Q8TE99-2;Q8TE99	B7Z4T2	PXYLP1	2-phosphoxylose phosphatase 1	4	LY(1)FGY(1)S(1)LLGAHPILNQT(1)IGR	45.328	0.028620999999999997	10908000.0	696.1	664.07	944.08	861.21	845.42	834.87	621.45	821.33	861.64	1031.5	True	False	665.5002774866051	773.7962802399902	745.9305096165541	785.7090564147837	956.6075484618295	996.1968117711245	760.8259819174108	792.4433583657241	821.5825444688776	844.6853545606366	0.7878676644426555	0.9160763544225063	0.8830868270523645	0.9301795658851817	1.1325016389794154	1.1793702902417393	0.9007211712734794	0.9381521226657396	0.9726492119615642	1.0	9.72227022708624	-7.531543835410323	23.980067376057974	1.02050494456843	0.874202915223128	0.417974785136353	0.08420706945294396	133.2468381528858	368748.6198650347	0.027550889873199053	0.03563509207191681	2.9407368561912156e-08	7.531543835410323	-0.146302029345302	
LY(ph)KSEKY(ph)GRGFIDR	ddPTM_K562_Methotrexat_30min_R1	1	LYKSEKYGRGFIDR	14	3	Q9UK12;Q9UK12-2	Q9UK12	ZNF222	Zinc finger protein 222	2	LY(0.797)KS(0.275)EKY(0.928)GRGFIDR	42.468999999999994	0.033065	38613000.0	213.6	236.15	166.35	195.39	216.07	177.39	251.53	235.05	290.0	242.18	True	False	204.21039975741832	275.1697736363243	131.43540830725553	178.26046206254532	244.48699225964305	211.66810693890042	307.9420053611496	226.7831582723918	276.5179632978674	198.31885522781877	1.0297074351444377	1.3875119101520783	0.6627479175203442	0.8988578612848921	1.232797516800854	1.067312065187885	1.552762116377695	1.1435279717194549	1.3943100013370762	1.0	7.631678038549213	-7.796200490942834	12.56660087939988	1.2468649511310814	0.9990807498567595	0.21257271686935486	0.2223402486957033	1.6303457387823466	586.7549578605569	0.0695685309040852	0.07908152645130487	1.598819767141013e-08	7.796200490942834	-0.24778420127432188	
LY(ph)QAMQPVYTSGIYNVGPENPSR	ddPTM_K562_Methotrexat_30min_R1	1	LYQAMQPVYTSGIYNVGPENPSR	23	0	C9JHU5;E9PCX8;Q68CZ2-4;Q68CZ2-3;Q68CZ2-2;Q68CZ2	C9JHU5	TNS3	Tensin-3	1	LY(0.998)QAMQPVY(0.001)T(0.001)SGIYNVGPENPSR	44.641000000000005	0.031235000000000002	23037000.0	2213.0	2253.4	2154.9	2349.5	2079.3	2153.5	2179.8	1881.9	2120.1	2053.9	True	False	2115.7191697713793	2625.736048749069	1702.615938450887	2143.5229828340775	2352.764395823002	2569.633396994881	2668.675638238915	1815.7125103289259	2021.5370137510633	1681.9188073020764	1.257919918955631	1.56115505537449	1.012305666039855	1.2744509268390005	1.3988572965641617	1.5277987176543708	1.5866851756772196	1.0795482531296885	1.2019230684469009	1.0	10.715892347490628	-9.293129790367287	24.76557861266049	1.105551638775772	1.370464862197745	0.3701779611575978	0.16731464591391268	752.4440069256465	588019.1910932583	0.09584770519914743	0.04605121338545381	5.091786785552714e-10	9.293129790367287	0.2649132234219731	
LY(ph)RRT(ph)LMRY(ph)AGLSAVLILR	ddPTM_K562_Methotrexat_30min_R1	1	LYRRTLMRYAGLSAVLILR	19	3	Q8NFU1	Q8NFU1	BEST2	Bestrophin-2	3	LY(0.999)RRT(0.998)LMRY(0.993)AGLS(0.009)AVLILR	43.532	0.033486	12012000.0	260.6	174.13	276.09	276.11	45.352	158.28	0.0	47.865	193.59	267.95	True	False	249.14433603362946	202.90202279607493	218.14248199308798	251.90386498843012	51.31658292664104	188.86536989846758	0.0	46.18156081985973	184.59004315460055	219.42165851141303	1.1354591781133148	0.9247128299575821	0.9941702358509039	1.1480355526313166	0.2338720036790345	0.8607416933212357	0.0	0.21046947294611593	0.841257168535162	1.0	7.777562127023685	-7.753178488315721	24.99987610046279	0.4755115991002638	1.037572686404751	0.4064768758559062	0.3079632711532035	172.56890949717186	522241.4758041981	0.08940832424949759	0.11345123497325627	1.7653121555823246e-08	7.753178488315721	0.5620610873044871	
LY(ph)RS(ph)DVFKGENY(ph)QK	ddPTM_K562_Methotrexat_30min_R1	1	LYRSDVFKGENYQK	14	2	E9PCC8;E7ENG7;G5E9U2;A4D0V7-2;A4D0V7	E9PCC8	CPED1	Cadherin-like and PC-esterase domain-containing protein 1	3	LY(1)RS(1)DVFKGENY(1)QK	81.23899999999999	0.016636	64964000.0	1904.6	1542.1	2039.4	2140.8	1581.1	1625.3	1465.3	1402.3	1387.3	1597.4	True	False	1820.8760645036461	1796.9058137818135	1611.3578100499963	1953.1193878064234	1789.0423634087172	1939.3662224916548	1793.9308251727118	1352.9803141687942	1322.804725803902	1308.095380877519	1.392005576292254	1.3736810327824738	1.2318351043859184	1.4931016624309144	1.3676696589269821	1.4825877767343356	1.371406742503193	1.0343131960768523	1.0112448565612362	1.0	10.353252024658678	-9.264658232933881	5.001549137262191	1.0119834535075025	1.389281709528869	0.8659552627859378	0.06720594913051182	0.06238935890367931	4.933918106506736	0.03648004555375797	0.018479974673544668	5.436780093774272e-10	9.264658232933881	0.37729825602136646	
LYEALT(ph)PVH	ddPTM_K562_Methotrexat_30min_R1	3	LYEALTPVH	9	0	G5E9W3;Q9UKF6	G5E9W3	CPSF3	Cleavage and polyadenylation specificity factor subunit 3	1	LYEALT(1)PVH;LYEALT(1)PVH;LYEALT(1)PVH	168.26	5.7867e-07	106461000.0	16815.2	13152.800000000001	16943.7	16923.300000000003	13397.7	12610.199999999999	14379.7	17273.8	17414.6	19474.8	True	False	16076.02394195197	15326.076640626055	13387.448919360659	15439.6605641183	15159.732383935861	15046.942680652355	17604.71376969635	16666.27066311696	16604.999047058765	15947.7250053296	1.0080449679549588	0.9610196210120382	0.8394582245985984	0.9681418860030814	0.9505890262635958	0.9435165627463347	1.1039012626448599	1.045056311012839	1.0412142823825663	1.0	13.961063013093156	-8.74261273456086	24.94971251368475	1.0512976448174238	0.9423417669970818	0.5380399285584228	0.046395108179583935	176.85693669452635	234376.86624083447	0.018107429974181587	0.01400274100436186	1.808786322891984e-09	8.74261273456086	-0.108955877820342	
LYENFISEFEHR	ddPTM_K562_Methotrexat_30min_R1	3	LYENFISEFEHR	12	0	E9PPD2;E9PQG3;J3KNQ3;A0A087WUL9;Q9UNM6	E9PPD2	PSMD13	26S proteasome non-ATPase regulatory subunit 13	0	;;	155.08	2.6105e-07	2799500.0	7187.4	5289.9	7108.9	6541.0	5828.9	5231.3	5757.3	7853.200000000001	7851.599999999999	8733.2	False	True	6871.450501949758	6163.966062074069	5616.8390388665375	5967.560685557648	6595.502518545997	6242.17468757805	7048.521080848199	7576.998504763863	7486.580829757022	7151.532853561757	0.9608360393013498	0.8619083752099608	0.7854035147260942	0.8344449795242929	0.9222501879804923	0.8728443000117367	0.9855958470969962	1.059492931084027	1.0468498129080672	1.0	12.804036785744149	-8.864284031453765	2.603202632282874	1.039984654212622	0.8667726555064377	0.7169842647955208	0.04676647336754837	0.15349721583535555	2.104773477425268	0.024175065322276763	0.015077343210666028	1.3668346143705773e-09	8.864284031453765	-0.17321199870618442	
LYFLQCETCHSR	ddPTM_K562_Methotrexat_30min_R1	1	LYFLQCETCHSR	12	0	P20042	P20042	EIF2S2	Eukaryotic translation initiation factor 2 subunit 2	0		96.06700000000001	0.01602	6515000.0	2110.1	1731.0	2223.2	2330.7	1520.9	1472.8	1557.6	1984.2	2168.8	2503.5	False	True	2017.3425305624	2017.018328030814	1756.5807018256114	2126.3711496451942	1720.9250082273845	1757.3977557901376	1906.931449729759	1914.414561344733	2067.972961380742	2050.0918905890007	0.9840254184815141	0.9838672779937271	0.8568302278981933	1.0372077268371995	0.8394379862323903	0.8572287729430651	0.9301687687676716	0.933818903500327	1.0087220825924073	1.0	11.00147286128351	-9.729183939771612	5.26630355378299	1.0052794900419186	0.9252814160483632	0.20543586081444376	0.060161763196971856	0.2736626159329819	18.962080942870056	0.04724861146882992	0.015588347805369539	1.8655893773994108e-10	9.729183939771612	-0.07999807399355541	
LYLPT(ph)S(ph)Y(ph)LVK	ddPTM_K562_Methotrexat_30min_R1	1	LYLPTSYLVK	10	0	E9PKB8;A6NE52-2;A6NE52	E9PKB8	KIAA1875	WD repeat-containing protein KIAA1875	3	LYLPT(1)S(1)Y(1)LVK	72.289	0.017925999999999997	12438000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
LYMHS(ph)VSFLEGHLDQLLR	ddPTM_K562_Methotrexat_30min_R1	1	LYMHSVSFLEGHLDQLLR	18	0	O95522	O95522	PRAMEF12	PRAME family member 12	1	LY(0.001)MHS(0.998)VS(0.001)FLEGHLDQLLR	71.531	0.025504	0.0	767.4	819.92	681.96	688.08	734.42	998.68	962.43	942.79	957.86	834.99	True	False	733.6660148588153	955.3978437429375	538.8259155348122	627.7570947131181	831.0091028616976	1191.660775904735	1178.2794267869886	909.6315413215405	913.3292976706733	683.7652197814699	1.0729794286601673	1.397260077147944	0.7880276737489221	0.9180886604816608	1.2153427504360144	1.7427923231977016	1.723222229939634	1.33032730388401	1.3357352366687671	1.0	9.417357230672788	-8.011897857795317	15.999486483249846	1.4671104247244329	1.0529806709328104	0.34507465475632726	0.24557670624347877	5.4898228753406455	7383.449471973014	0.08091394778396362	0.08547072004796467	9.729760321897277e-09	8.011897857795317	-0.4141297537916224	
LYPCWET(ph)QVGQEMYK	ddPTM_K562_Methotrexat_30min_R1	1	LYPCWETQVGQEMYK	15	0	H3BNW8;Q7Z402-2;Q7Z402	H3BNW8	TMC7	Transmembrane channel-like protein;Transmembrane channel-like protein 7	1	LYPCWET(1)QVGQEMYK	80.312	0.022251	0.0	1339.1	1088.6	1619.0	1264.5	793.04	1036.1	913.0	1247.2	1142.8	1344.1	True	False	1280.234767393066	1268.4726469638047	1279.1940249440747	1153.6432482629027	897.3386603489021	1236.3116613078225	1117.763491013913	1203.33526908031	1089.6714774372513	1100.6704654047032	1.1631408379095	1.1524545146193257	1.1621952847383168	1.048127740793628	0.8152655027578681	1.1232350645960556	1.015529648651856	1.0932747874159212	0.9900070108963923	1.0	10.104166883366302	-7.330806527815685	4.683123104819529	1.0108782186491088	1.1588680400514504	0.4402483258492139	0.07670539075595433	0.20870454068381836	8.867696688431105	0.02215008645144189	0.033944821034491056	4.6686731692616164e-08	7.330806527815685	0.14798982140234163	
LYSGS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	1	LYSGSPTR	8	0	H3BMH3;Q6PJI9-4;Q6PJI9-3;Q6PJI9	H3BMH3	WDR59	WD repeat-containing protein 59	1	LYS(0.028)GS(0.95)PT(0.023)R	99.01299999999999	0.015701	13160000.0	2987.7	2254.0	3154.4	3024.2	2915.9	2674.8	2732.0	3404.7	3109.1	3344.8	True	False	2856.3642853709675	2626.435188550813	2492.334547426552	2759.073081373405	3299.391959688496	3191.667244152267	3344.7205448521463	3284.9547711976693	2964.5586196186205	2739.024308225321	1.0428400641766022	0.9588944430553604	0.9099351692287079	1.0073196769695973	1.204586593036208	1.1652569984748415	1.2211357653190271	1.1993156692085254	1.082341113481913	1.0	11.41944635435653	-7.659779593694001	5.207182439423432	1.1597704067972174	0.9682087858203962	0.5747143990136926	0.06950607333710086	0.13312905591603705	5.668465429142298	0.02022171099979389	0.02616790160922725	2.188872204113756e-08	7.659779593694001	-0.19156162097682128	
LYSILQGDSPT(ph)KWR	ddPTM_K562_Methotrexat_30min_R1	1	LYSILQGDSPTKWR	14	1	O15042-2;O15042;O15042-3	O15042-2	U2SURP	U2 snRNP-associated SURP motif-containing protein	1	LYSILQGDS(0.352)PT(0.648)KWR	102.03	0.017917	14861000.0	1184.5	1027.1	1379.9	1363.6	1030.8	861.49	1014.3	1508.0	1336.8	1986.3	True	False	1132.4307982802527	1196.8108172850668	1090.2778474492447	1244.0553051255781	1166.3682677893278	1027.9607500242028	1241.782594671865	1454.9627852574627	1274.6524597813425	1626.56182235947	0.6962113475881064	0.7357917792199181	0.6702959779713147	0.7648373938354014	0.7170758908489618	0.6319838175797438	0.7634401457121075	0.8945019889541684	0.7836483324884312	1.0	10.66760994203432	-9.891388436159257	0.7249667997643559	0.9928944306855225	0.7028695599137608	0.7267096002485827	0.05404656850075888	0.3550522083661289	0.4312736115599216	0.053276798170938396	0.021331192581638278	1.2841376040982376e-10	9.891388436159257	-0.29002487077176176	
LYT(ph)YIQSR	ddPTM_K562_Methotrexat_30min_R1	1	LYTYIQSR	8	0	O43781-2;O43781	O43781-2	DYRK3	Dual specificity tyrosine-phosphorylation-regulated kinase 3	1	LYT(0.633)Y(0.367)IQSR	143.89	2.3245000000000002e-07	13215000.0	567.09	738.07	1035.2	873.04	741.18	792.6	971.44	701.45	793.85	817.26	True	False	542.1614026143934	860.0235224550566	817.9256668450316	796.5019386820436	838.658161350499	945.7587325090051	1189.3101486424491	676.7796059143551	756.9440867724553	669.2462945886824	0.8101074402624894	1.2850628078316453	1.2221594253991759	1.1901477006631351	1.253138296217145	1.413169919887665	1.7770888808183796	1.011256410960486	1.1310396380119994	1.0	9.386393435903264	-6.260419248550491	23.3444054253959	1.2723796994995475	0.8101070912099119	0.2802338574404021	0.21135789753806458	45.735335932075	1046193.090672377	0.054213975896237616	0.3209159353211384	5.490106275523753e-07	6.260419248550491	-0.4622726082896357	
LYTY(ph)IQSR	ddPTM_K562_Methotrexat_30min_R1	3	LYTYIQSR	8	0	O43781-2;O43781	O43781-2	DYRK3	Dual specificity tyrosine-phosphorylation-regulated kinase 3	1	LYT(0.076)Y(0.924)IQSR;LYT(0.075)Y(0.924)IQSR;LYT(0.004)Y(0.996)IQSR	180.87	1.9183000000000002e-10	41917100.0	3216.95	2821.3500000000004	3393.33	3239.7299999999996	3133.6000000000004	3139.5800000000004	2819.14	3355.45	3327.5099999999998	3785.56	True	False	3075.536729867169	3287.530132749704	2681.1164055981912	2955.7079009053155	3545.7233255186616	3746.259401224605	3451.40390805801	3237.4369216128357	3172.8147863906443	3099.9584011735947	0.9921219357984997	1.0605078221388706	0.8648878657801226	0.9534669561328086	1.143797066494927	1.2084869912468281	1.1133710396731014	1.044348504930645	1.0235023751252492	1.0	11.598033140541203	-7.7528257485937475	24.999333513094026	1.0983362249985449	0.9670249321099823	0.39752650747629614	0.07252271425452346	196.57709810945892	570522.6431801516	0.023147741231327817	0.029406764736868284	1.7667465478996173e-08	7.7528257485937475	-0.13131129288856258	
MADHLEGLS(ph)SDDEET(ph)STDITNFNLEKDR	ddPTM_K562_Methotrexat_30min_R1	1	MADHLEGLSSDDEETSTDITNFNLEKDR	28	1	Q9Y5B6-2;Q9Y5B6	Q9Y5B6-2	PAXBP1	PAX3- and PAX7-binding protein 1	2	MADHLEGLS(0.518)S(0.518)DDEET(0.463)S(0.463)T(0.035)DIT(0.002)NFNLEKDR	62.871	0.00088159	9416200.0	1086.1	738.1	1342.4	1452.0	719.32	771.39	644.37	859.59	949.8	1389.8	True	False	1038.3563444594197	860.0584794451437	1060.6485849814233	1324.7054143754326	813.9231881899689	920.4502001894041	788.8863753610462	829.3577324797499	905.6440053114292	1138.0937525626496	0.9123645061062405	0.7557009055787778	0.931951855981247	1.16396861980183	0.7151635674629223	0.808764829889298	0.6931646655512413	0.7287253186411772	0.7957551856094346	1.0	10.152403691854962														
MAEESSSSSSSSS(ph)PTAATSQQQQLK	ddPTM_K562_Methotrexat_30min_R1	1	MAEESSSSSSSSSPTAATSQQQQLK	25	0	A0A669KAU9;A0A669KAX4;K4DI93;Q13620-1;Q13620	A0A669KAU9	CUL4B	Cullin-4B	1	MAEESSSSSSS(0.024)S(0.401)S(0.498)PT(0.075)AAT(0.001)SQQQQLK	135.23	3.3826e-12	11768000.0	1616.5	1118.8	2632.1	1747.8	1150.2	1230.5	1187.7	1168.5	1453.5	1933.3	True	False	1545.4405955424477	1303.6626836515752	2079.658179774736	1594.5730876345594	1301.4714606240634	1468.2767100079884	1454.0719586826112	1127.403192687895	1385.9271022532762	1583.1606359399696	0.9761742178644264	0.8234557214578241	1.3136116023627513	1.0072086504903617	0.8220716401600909	0.9274338160487605	0.9184614155210381	0.7121217942729622	0.8754178639809409	1.0	10.628591931114032	-7.6776982698952025	6.121271173762204	0.8665720090502053	1.038498685547628	0.24391822884459347	0.13277470076559542	0.2954104336441367	17.111501964705877	0.04028183799247857	0.05196844149049124	2.100398648191249e-08	7.6776982698952025	0.17192667649742266	
MAFT(ph)EHS(ph)PLT(ph)PHRRDLCS(ph)RS(ph)IWLAR	ddPTM_K562_Methotrexat_30min_R1	1	MAFTEHSPLTPHRRDLCSRSIWLAR	25	3	P26441	P26441	CNTF	Ciliary neurotrophic factor	5	MAFT(1)EHS(1)PLT(1)PHRRDLCS(1)RS(1)IWLAR	44.341	0.021348	28112000.0	615.5	596.18	612.0	859.48	925.8	717.51	726.76	647.33	689.63	880.92	True	False	588.4433569788906	694.688611672681	483.5495634748444	784.130722828786	1047.5589273567712	856.1586527410248	889.7544301525429	624.5630369898629	657.5692518245119	721.3768517106702	0.8157225388969142	0.963003747660185	0.670314776982595	1.0869918004290013	1.4521659862977223	1.1868396535191468	1.2334113966127176	0.8657930116675863	0.9115474807171242	1.0	9.494609318946733	-7.380281342563361	7.026854805445466	1.1252422166429215	0.8323648119439978	0.3694280228607745	0.17175291827204883	0.2905394330297472	15.610134637833935	0.052827124819015574	0.07857355067005403	4.165994166042287e-08	7.380281342563361	-0.29287740469892365	
MAGLS(ph)GAQIPDGEFTAVVY(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	MAGLSGAQIPDGEFTAVVYR	20	0	Q8N4P2	Q8N4P2	TTC30B	Tetratricopeptide repeat protein 30B	2	MAGLS(1)GAQIPDGEFT(0.069)AVVY(0.931)R	55.093999999999994	0.030154000000000004	0.0	632.38	654.85	797.37	692.71	490.79	569.48	526.51	761.9	565.85	918.83	True	False	604.5813323904321	763.0528319531942	630.0129337057793	631.9811898016571	555.3374875323284	679.5239502765938	644.5932701574322	735.1035451509689	539.5437570072356	752.4209833552592	0.8035147155179431	1.0141301862031074	0.8373144125996759	0.8399303100020858	0.7380675178088743	0.9031166930597858	0.8566923097798356	0.9769843763167437	0.7170769674727259	1.0	9.555396272767215														
MAHSVPSDS(ph)RTSRRPT(ph)T(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	MAHSVPSDSRTSRRPTTR	18	3	Q9Y4P1-2	Q9Y4P1-2	ATG4B	Cysteine protease ATG4B	3	MAHS(0.012)VPS(0.045)DS(0.641)RT(0.338)S(0.225)RRPT(0.849)T(0.889)R	42.185	0.034027999999999996	0.0	856.06	1001.3	1097.2	846.8	1046.5	1105.4	670.86	722.45	750.94	728.67	True	False	818.4286274173014	1166.7478058100835	866.9127141251623	772.5623587418155	1184.1330929778144	1319.0029055203825	821.3174321813738	697.0410240114422	716.0289633065537	596.7008020433341	1.3715896218250179	1.9553313852012404	1.4528432191753693	1.2947231780085824	1.9844670711399837	2.2104929321422175	1.3764309170841829	1.1681583494181749	1.1999798908508148	1.0	9.220863905838248	-8.991991302442125	24.987431704766003	1.1649003188800349	1.7117763351394037	0.4789528673937463	0.2770446795499648	175.53480592774136	547673.3949544448	0.12304950940637024	0.08279484745797959	1.0186117874527502e-09	8.991991302442125	0.5468760162593689	
MAKGT(ph)VTY(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	MAKGTVTYR	9	1	V9GYA9;H0YCN8;Q9BYV7-6;Q9BYV7-5;Q9BYV7-4;Q9BYV7-2;Q9BYV7	V9GYA9	BCO2	Beta,beta-carotene 9,10-oxygenase	2	MAKGT(0.83)VT(0.19)Y(0.98)R	79.20100000000001	0.028914999999999996	20671000.0	1485.4	1538.6	2232.7	1821.9	1321.2	1281.2	1333.6	1403.1	1277.0	1333.5	True	False	1420.1035945677393	1792.8274982716425	1764.0867816507937	1662.176855682231	1494.9609578999427	1528.7737674621978	1632.6937476628193	1353.7521777153486	1217.632548728885	1091.9902281208033	1.300472804607037	1.641798115132316	1.6154785420439115	1.5221535988858226	1.3690241170679782	1.3999885054768775	1.4951541741106127	1.2397108901285767	1.1150580997636752	1.0	10.09274423075068	-9.581257102183628	1.026996688914269	0.9888778798299508	1.5027042256611605	0.7413343618588895	0.10140675518449314	0.2565871118987348	0.5156231336418089	0.09799633781519154	0.03499775884255322	2.6226654666668697e-10	9.581257102183628	0.5138263458312097	
MALPPQEDAT(ph)ASPPR	ddPTM_K562_Methotrexat_30min_R1	1	MALPPQEDATASPPR	15	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	MALPPQEDAT(0.631)AS(0.369)PPR	72.209	0.024981	0.0	1519.1	1079.3	1747.6	1425.2	1338.4	1316.4	948.1	1385.6	1618.6	1722.9	True	False	1452.3221829189813	1257.635980036776	1380.8026423670553	1300.2549287657484	1514.423059380322	1570.7756692844505	1160.735559507438	1336.8676626344438	1543.3516392894076	1410.8661147576543	1.029383417553017	0.8913928592386678	0.9786914774717919	0.9216005084855939	1.0733995547412065	1.1133414098291416	0.8227113454396192	0.9475510458794163	1.093903683096472	1.0	10.462365373419578	-7.720685893804891	24.99816739780998	1.0018166112103966	0.9523778217197874	0.08239049873771687	0.08506314679310202	473.3403877126065	290344.87437987933	0.02621684748705304	0.03384534168365562	1.9024537440032205e-08	7.720685893804891	-0.0494387894906092	
MALPPQEDATAS(ph)PPR	ddPTM_K562_Methotrexat_30min_R1	6	MALPPQEDATASPPR	15	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	MALPPQEDAT(0.118)AS(0.882)PPR;MALPPQEDAT(0.425)AS(0.575)PPR;MALPPQEDAT(0.029)AS(0.971)PPR;MALPPQEDAT(0.32)AS(0.68)PPR;MALPPQEDAT(0.013)AS(0.987)PPR;MALPPQEDAT(0.028)AS(0.972)PPR	179.74	2.39e-06	445302000.0	15960.6	13430.1	16982.899999999998	14160.8	14758.7	13023.0	13740.8	18609.199999999997	17512.2	17206.3	True	False	15258.991134682825	15649.195752331982	13418.42137506036	12919.344650060342	16699.727739447375	15539.510438386043	16822.524181077744	17954.703888205022	16698.06164436177	14090.07233754405	1.0829604539377773	1.1106540390593689	0.9523316171561429	0.9169111655754799	1.1852123494745803	1.1028694577372649	1.1939274531794186	1.2742804620217152	1.1850941034467606	1.0	13.782391397921497	-7.783627726192553	24.99985857773869	1.169761488723243	1.0179683785037676	0.39205153107562185	0.08521203465015076	236.42213271271504	266377.96301163407	0.02742218498102037	0.031118377954809463	1.6457818699946724e-08	7.783627726192553	-0.1517931102194754	
MALPPQEDATAS(ph)PPRQK	ddPTM_K562_Methotrexat_30min_R1	6	MALPPQEDATASPPRQK	17	1	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	MALPPQEDAT(0.262)AS(0.738)PPRQK;MALPPQEDAT(0.149)AS(0.851)PPRQK;MALPPQEDAT(0.015)AS(0.985)PPRQK;MALPPQEDAT(0.039)AS(0.961)PPRQK;MALPPQEDAT(0.023)AS(0.977)PPRQK;MALPPQEDAT(0.077)AS(0.923)PPRQK	147.75	9.7468e-10	877813000.0	52624.7	41141.9	68043.1	57451.4	41144.6	38871.5	37577.50000000001	52180.2	52678.3	69974.6	True	False	50311.381199036594	47939.89968227092	53761.78317397912	52414.72496105285	46555.83607963212	46382.867235331585	46005.210934912735	50344.99278998108	50229.297331013964	57301.52187226241	0.8780112561616014	0.8366252433772948	0.9382260962252601	0.9147178512622528	0.8124711972469987	0.8094526239412823	0.8028619385968209	0.8785978303021523	0.8765787659704052	1.0	15.806285835606833	-10.370334116128939	1.867173369692429	0.9999144793643024	0.8575702543941028	0.4918792133673041	0.04283293712355929	1.8318858838808765	8.019753787264339	0.045738616637602675	0.012780633524728148	4.2625146423894904e-11	10.370334116128939	-0.1423442249701996	
MANS(ph)SPVLSKVPGYGLQVR	ddPTM_K562_Methotrexat_30min_R1	1	MANSSPVLSKVPGYGLQVR	19	1	Q9NXE8	Q9NXE8	CWC25	Pre-mRNA-splicing factor CWC25 homolog	1	MANS(0.624)S(0.376)PVLS(0.001)KVPGYGLQVR	72.29	0.014544999999999999	0.0	1685.6	1118.8	1576.2	1902.5	1268.2	887.91	1094.9	1376.9	1472.3	2284.2	True	False	1611.5030422804512	1303.6626836515752	1245.3771600474665	1735.710778821804	1434.9905289196986	1059.4860411078364	1340.4591963977373	1328.473646565651	1403.8530943567243	1870.5092456494494	0.861531717113181	0.6969560223686238	0.6657957788468807	0.9279348834328575	0.7671656968589124	0.5664158269049229	0.7166279447778531	0.7102203047942695	0.7505191955730216	1.0	10.869215381595811	-12.942558673156222	6.806291648889116	1.10711164364731	0.7364887814717114	0.4021701990387415	0.094865645312784	0.05864085397061841	0.0004948959964391304	0.03493309665060734	0.022943689417010308	1.1414090899081676e-13	12.942558673156222	-0.3706228621755987	
MANSS(ph)PVLSK	ddPTM_K562_Methotrexat_30min_R1	2	MANSSPVLSK	10	0	Q9NXE8	Q9NXE8	CWC25	Pre-mRNA-splicing factor CWC25 homolog	1	MANS(0.196)S(0.804)PVLSK;MANS(0.035)S(0.963)PVLS(0.003)K	96.82	0.007277800000000001	77949000.0	13673.1	9660.2	18386.800000000003	13162.1	10638.9	9073.4	8856.5	12587.6	12781.7	15064.2	True	False	13072.046895707663	11256.383854675492	14527.661950489002	12008.199128478565	12038.101827885022	10826.706136193809	10842.795573017222	12144.886973280398	12187.481556842593	12335.927404917438	1.0596728131276767	0.9124878483143788	1.1776708368677558	0.9734330248807859	0.9758570582286586	0.8776564404779156	0.8789607150812988	0.9845134925517731	0.9879663811886839	1.0	13.590578559896084	-7.506629909160619	24.481302324689498	0.9456946613627228	1.04275718478714	0.2732273360424293	0.0718979770604141	735.0385675944337	1107445.8969963368	0.020550950334919996	0.029544081436263577	3.114369165044344e-08	7.506629909160619	0.09706252342441712	
MAPALSGANLTS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	MAPALSGANLTSPR	14	0	Q9UQ35	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	MAPALS(0.006)GANLT(0.127)S(0.867)PR;MAPALS(0.02)GANLT(0.348)S(0.632)PR	115.09	0.0012068	101071000.0	5268.700000000001	4996.5	6830.799999999999	5214.1	5235.799999999999	5325.3	4697.6	6611.299999999999	6660.700000000001	6476.5	True	False	5037.09425656325	5822.086699021353	5397.108428405174	4756.987948412496	5924.399472731244	6354.338857217015	5751.156380489546	6378.776831679488	6351.045510821058	5303.543091431864	0.9497602206157097	1.0977730544750774	1.0176420433209017	0.8969452809948212	1.1170644549494477	1.1981308999794427	1.0843989162227838	1.2027387581680475	1.197509928990958	1.0	12.37274077502223	-7.932961875942248	8.845084266071396	1.1472537583006606	1.0004289448010415	0.4590443719634719	0.07542073599025005	0.26396217080589246	31.919104527332404	0.02284079827560248	0.02591484809415445	1.1669120486404667e-08	7.932961875942248	-0.14682481349961907	
MAPPVDDLS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	3	MAPPVDDLSPK	11	0	Q92576-2;Q92576;E7ER40;E7EVH3	Q92576-2	PHF3	PHD finger protein 3	1	MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK	123.26	0.0017898	59585000.0	14966.6	9510.5	17397.300000000003	15832.3	10879.300000000001	9824.9	10322.4	14959.0	15527.400000000001	19933.4	True	False	14308.686184500826	11081.94847414042	13745.844478171433	14444.306840231515	12310.118641599182	11723.422875381946	12637.460963463329	14432.883491158082	14805.534563142446	16323.268101404743	0.8765821951591577	0.6789050088068291	0.8421012503610412	0.8848906205852535	0.7541454667732744	0.7182031687865897	0.7741991912989395	0.8841908006103276	0.9070202407487454	1.0	13.994642309510386	-9.737859186283728	1.5950175900552572	0.9898664598334652	0.7877819439204302	0.5294477652723437	0.06407580714058259	0.2881426792811183	1.4311027753547931	0.06124156955885981	0.01860528307572345	1.828693047350616e-10	9.737859186283728	-0.202084515913035	
MAPPVRLERPFPS(ph)RR	ddPTM_K562_Methotrexat_30min_R1	1	MAPPVRLERPFPSRR	15	3	Q2VPA4-3;Q2VPA4	Q2VPA4-3	CR1L	Complement component receptor 1-like protein	1	MAPPVRLERPFPS(1)RR	41.092	0.033908999999999995	1940000.0	738.5	594.56	859.12	857.62	633.24	562.61	657.71	772.57	912.09	590.67	True	False	706.0364242549321	692.8009342079729	678.802452569458	782.4337861409492	716.5221593858308	671.3264200061717	805.2182099394971	745.3982752031553	869.6871349805238	483.69393929067513	1.4596759787611078	1.4323126215390416	1.4033718379124298	1.6176216458043045	1.4813544292835101	1.3879157158567148	1.6647266887824337	1.5410535767643956	1.798011230522958	1.0	8.917950650630514	-7.228844428115053	24.72246838984358	1.5227958769422778	1.4318393825851536	0.013122305812260038	0.20000605243027453	2160.358415683427	1638576.428581036	0.050995236236714495	0.08831925029966609	5.904125384009084e-08	7.228844428115053	-0.09095649435712416	
MAPT(ph)PIPT(ph)RSPSDSSTASTPVAEQIER	ddPTM_K562_Methotrexat_30min_R1	1	MAPTPIPTRSPSDSSTASTPVAEQIER	27	1	Q16643;Q16643-2;Q16643-3;D6R9Q9	Q16643	DBN1	Drebrin	2	MAPT(0.988)PIPT(0.842)RS(0.082)PS(0.021)DS(0.033)S(0.014)T(0.014)AS(0.003)T(0.005)PVAEQIER	55.177	0.0050445	34008000.0	1528.7	1366.0	1215.4	1546.8	1422.0	1220.8	1327.0	1778.1	1732.3	1979.4	True	False	1461.5001784136957	1591.7082819700126	960.3041494237355	1411.194445561927	1609.017924715197	1456.7023222899247	1624.6135296554899	1715.5632151633251	1651.7657511065377	1620.9114792218359	0.9016532964004487	0.9819834718760564	0.5924470038825047	0.8706178367244402	0.9926624281096778	0.8986933222221707	1.002283931282559	1.0583941425270982	1.019035136884535	1.0	10.662589589598479	-8.16539752364582	1.2498846576558655	1.0204454200769635	0.8346968792936216	0.36077952803837954	0.10125330374111009	0.5211305103063595	1.6734401938923327	0.050416472040754536	0.04943656734208721	6.832859274655314e-09	8.16539752364582	-0.1857485407833419	
MAPT(ph)PIPTRSPSDS(ph)STASTPVAEQIER	ddPTM_K562_Methotrexat_30min_R1	1	MAPTPIPTRSPSDSSTASTPVAEQIER	27	1	Q16643;Q16643-2;Q16643-3;D6R9Q9	Q16643	DBN1	Drebrin	2	MAPT(0.923)PIPT(0.284)RS(0.223)PS(0.142)DS(0.406)S(0.014)T(0.006)AS(0.001)T(0.001)PVAEQIER	55.163000000000004	0.0052347	28469000.0	2357.3	1680.7	1791.6	2135.8	1434.9	1680.5	1573.7	2211.1	1954.2	2537.0	True	False	2253.6759145513224	1958.4071079846283	1415.5676436626338	1948.5577300434225	1623.6145008254812	2005.2328412583697	1926.642284565822	2133.3343597365897	1863.3496685403186	2077.5247159673627	1.0847889785522662	0.9426636867098501	0.6813722276240164	0.9379227669674731	0.7815139277750897	0.9652028810279007	0.9273739415748491	1.026863528188275	0.8969085442012096	1.0	11.020649925263694	-8.400486385247895	23.51180201332157	0.9627181423899664	0.8796692330562755	0.11965006023043134	0.10463434769139662	22.379848685627138	4210.6300288792145	0.03750523781950065	0.033076505564147776	3.976615626212937e-09	8.400486385247895	-0.08304890933369091	
MAPT(ph)PIPTRSPSDSSTASTPVAEQIER	ddPTM_K562_Methotrexat_30min_R1	1	MAPTPIPTRSPSDSSTASTPVAEQIER	27	1	Q16643;Q16643-2;Q16643-3;D6R9Q9	Q16643	DBN1	Drebrin	1	MAPT(0.969)PIPT(0.02)RS(0.008)PS(0.001)DSSTASTPVAEQIER	64.547	0.00078603	25542000.0	585.01	442.98	470.21	917.61	278.27	346.09	401.71	507.65	563.84	914.34	True	False	559.2936608711951	516.1749156274351	371.5193467998475	837.1645559814328	314.86738249683384	412.9669943654323	491.8036932915652	489.7956617612407	537.6272014685159	748.7441658642484	0.7469756511900465	0.6893875627486633	0.4961899721395706	1.1180915914251217	0.42052732675839116	0.5515461932030674	0.6568380973278021	0.6541562313155218	0.7180385851126494	1.0	9.548329046391997	-10.249642159475211	2.8466087291744144	0.9999772716874376	0.6646926474583904	0.2393671501289828	0.17720259274516767	2.257100333676622	23.701273790011967	0.16669437861131817	0.044608767535950895	5.628048619103103e-11	10.249642159475211	-0.33528462422904715	
MAPTPIPT(ph)RSPSDSSTASTPVAEQIER	ddPTM_K562_Methotrexat_30min_R1	7	MAPTPIPTRSPSDSSTASTPVAEQIER	27	1	Q16643;Q16643-2;Q16643-3;D6R9Q9	Q16643	DBN1	Drebrin	1	MAPT(0.006)PIPT(0.436)RS(0.436)PS(0.11)DS(0.003)S(0.003)T(0.003)AS(0.001)T(0.001)PVAEQIER;MAPT(0.007)PIPT(0.782)RS(0.202)PS(0.006)DS(0.001)S(0.001)T(0.001)ASTPVAEQIER;MAPT(0.239)PIPT(0.691)RS(0.063)PS(0.007)DSSTASTPVAEQIER;MAPT(0.003)PIPT(0.497)RS(0.497)PS(0.003)DSSTASTPVAEQIER;MAPT(0.006)PIPT(0.496)RS(0.496)PS(0.002)DSSTASTPVAEQIER;MAPT(0.042)PIPT(0.773)RS(0.1)PS(0.082)DS(0.002)S(0.001)TASTPVAEQIER;MAPT(0.002)PIPT(0.49)RS(0.49)PS(0.009)DS(0.003)S(0.001)T(0.003)AS(0.001)T(0.001)PVAEQIER	95.666	1.2821e-05	2725216000.0	7549.989999999999	7288.22	9363.630000000001	8698.43	6995.83	6534.130000000001	6775.05	7880.21	8218.890000000001	8797.230000000001	True	False	7218.101479702766	8492.474476441792	7398.332024575098	7935.852147083809	7915.904267412311	7796.7581464156765	8294.527425842072	7603.058547754454	7836.79559782486	7203.966400098373	1.001962124587949	1.178860922550364	1.0269803624395126	1.101594830727617	1.0988258173031202	1.0822868560726782	1.151383413688438	1.0553989462875106	1.0878445515400856	1.0	12.81457573707167	-10.573804872195742	1.3138226524361443	1.0000488077928051	1.0913517437846254	0.21377282399208097	0.04987662909132706	4.42451981990997	8.73664367030706	0.04402218514383709	0.013035796812869852	2.6680571489997056e-11	10.573804872195742	0.09130293599182027	
MAPTPIPTRS(ph)PSDSSTASTPVAEQIER	ddPTM_K562_Methotrexat_30min_R1	3	MAPTPIPTRSPSDSSTASTPVAEQIER	27	1	Q16643;Q16643-2;Q16643-3;D6R9Q9	Q16643	DBN1	Drebrin	1	MAPT(0.002)PIPT(0.061)RS(0.935)PS(0.002)DSSTASTPVAEQIER;MAPT(0.001)PIPT(0.179)RS(0.819)PS(0.001)DSSTASTPVAEQIER;MAPT(0.001)PIPT(0.128)RS(0.867)PS(0.004)DSSTASTPVAEQIER	128.07	3.4734e-17	982313000.0	3349.58	2647.54	3698.41	3546.1000000000004	3189.6	3071.08	3354.5	3596.5899999999997	3333.15	3943.1400000000003	True	False	3202.336473873846	3085.000984514559	2922.164282763071	3235.2189186754276	3609.0883070826935	3664.5227456898247	4106.832015997999	3470.095891133383	3178.19258402168	3228.9991361921766	0.9917427471505078	0.9554047103749218	0.9049752444991536	1.001926226121753	1.1177111404677365	1.134878825025405	1.2718591250046025	1.0746660945922462	0.984265541727456	1.0	11.656871339670522	-7.641391102542662	3.7586234004183696	1.1117380286094893	0.9512241803028576	0.4179511378162014	0.07770346902189519	0.2146999086951338	5.73512365052976	0.024940633851854264	0.03278970396355269	2.2835414410083595e-08	7.641391102542662	-0.16051384830663173	
MAPTPIPTRSPSDSS(ph)TASTPVAEQIER	ddPTM_K562_Methotrexat_30min_R1	1	MAPTPIPTRSPSDSSTASTPVAEQIER	27	1	Q16643;Q16643-2;Q16643-3;D6R9Q9	Q16643	DBN1	Drebrin	1	MAPT(0.002)PIPT(0.026)RS(0.123)PS(0.15)DS(0.231)S(0.36)T(0.07)AS(0.007)T(0.032)PVAEQIER	106.58	2.4642000000000003e-11	197570000.0	725.28	730.27	802.8	1071.2	778.76	650.35	591.39	869.92	873.18	985.11	True	False	693.3975596257511	850.9347050323876	634.3032509111198	977.2895591452912	881.1805900500752	776.0209332415235	724.0242617203921	839.3244205246498	832.5860523876958	806.6970330889282	0.8595513943700259	1.0548380248456706	0.7862967444944053	1.21147037742676	1.0923315122108999	0.9619732085415728	0.8975169512499962	1.0404456519578211	1.0320926174720586	1.0	9.655883139699773	-7.243874331356628	24.99422952029265	1.0291566127147114	0.91568968235353	0.26898591617398815	0.09965665382906175	1362.4781491915342	1938740.2981708872	0.02780851872051863	0.048028397027147916	5.7032928045206706e-08	7.243874331356628	-0.11346693036118138	
MAQEKMELDLEPDTSYGGT(ph)LR	ddPTM_K562_Methotrexat_30min_R1	1	MAQEKMELDLEPDTSYGGTLR	21	1	G1UD79;Q7Z309-4;Q7Z309;Q7Z309-2;Q7Z309-3	G1UD79	SPACIA2;FAM122B	Protein FAM122B	1	MAQEKMELDLEPDT(0.05)S(0.05)Y(0.044)GGT(0.857)LR	52.81399999999999	0.017569	139520000.0	1226.5	1248.5	1330.5	1254.0	1399.8	1122.8	1002.6	1325.9	1314.1	1103.8	True	False	1172.5845285696325	1454.7934041285225	1051.2462323583015	1144.0637669606012	1583.8982355951698	1339.7652092620629	1227.4585718406895	1279.267345472726	1253.0077778266464	903.8911239593131	1.2972630192819707	1.609478581619535	1.1630230726832775	1.2657097040064518	1.7523108631238933	1.4822196764069229	1.3579717062206058	1.4152891997314379	1.3862375065019978	1.0	9.82000519650409	-11.642711941206894	7.393532326678664	1.0000000006717078	1.4186621387909846	0.3725586852131282	0.16124563077415682	0.0	0.0	0.15877835265346857	0.03850940700304831	2.276606957693644e-12	11.642711941206894	0.41866213811927677	
MAQIS(ph)SNSGFKECPSSHPEPT(ph)RAK	ddPTM_K562_Methotrexat_30min_R1	1	MAQISSNSGFKECPSSHPEPTRAK	24	2	A0A0C4DGF9;O00443-2;O00443;E9PPP3	A0A0C4DGF9	PIK3C2A	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha	2	MAQIS(0.333)S(0.333)NS(0.333)GFKECPS(0.032)S(0.097)HPEPT(0.872)RAK	43.823	0.033393	0.0	160.46	94.62	0.0	55.292	0.0	0.0	130.86	0.0	0.0	172.26	True	False	153.40637052937896	110.2543467349946	0.0	50.44463620636805	0.0	0.0	160.20868612714202	0.0	0.0	141.06204476647142	1.0875099023507253	0.7816017903151834	0.0	0.35760601861315194	0.0	0.0	1.1357320560067588	0.0	0.0	1.0	7.140186047353368	-11.922776549517295	8.447769363925447	1.0000000005063976	0.363596740199781	0.15259663571825632	0.4422691793849493	4.389982698196846e-09	7.744763391046755e-10	0.439066310161524	0.10648922196742168	1.194602585827953e-12	11.922776549517295	-0.6364032603066165	
MAS(ph)LLQDQLT(ph)T(ph)DQDLLLMQEGMPMR	ddPTM_K562_Methotrexat_30min_R1	1	MASLLQDQLTTDQDLLLMQEGMPMR	25	0	F2Z3H8;C9JAE4;C9JEA7;Q9BRC7-2;Q9BRC7	F2Z3H8	PLCD4	Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4	3	MAS(1)LLQDQLT(1)T(1)DQDLLLMQEGMPMR	44.541000000000004	0.017399	9387200.0	492.78	467.06	366.75	651.09	516.52	576.77	641.54	634.28	726.79	424.29	True	False	471.1179812381116	544.2337263374193	289.77418693529273	594.0099505824384	584.4514335259444	688.2226396028498	785.4216758215399	611.9720128866734	693.0016915353688	347.4469695458385	1.3559421222004853	1.5663792579593037	0.8340098269214087	1.7096420537467687	1.682131331552276	1.9807990856919906	2.2605512341874654	1.7613393309678478	1.9945538521784154	1.0	8.44064898743386	-7.466190014106185	8.994176016843506	1.8381826146364073	1.280375847000397	0.304591980141246	0.3525313818484948	0.48165336891214056	73.20269909428615	0.09606303421304677	0.14210588997056292	3.418298511476227e-08	7.466190014106185	-0.5578067676360103	
MAS(ph)PPPSGPPSATHTPFHQSPVEEK	ddPTM_K562_Methotrexat_30min_R1	3	MASPPPSGPPSATHTPFHQSPVEEK	25	0	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	MAS(0.922)PPPS(0.076)GPPS(0.001)ATHTPFHQSPVEEK;MAS(0.966)PPPS(0.033)GPPS(0.001)ATHTPFHQSPVEEK;MAS(0.761)PPPS(0.174)GPPS(0.059)AT(0.005)HTPFHQSPVEEK	72.805	0.0079497	142735000.0	10948.4	8056.200000000001	14518.2	11481.6	8377.4	7851.7	7010.7	10577.1	10882.7	13540.7	True	False	10467.121445244009	9387.350118013781	11471.028222941979	10475.025954334	9479.17493847334	9368.929901641382	8583.027936967408	10205.09739784265	10376.7656523507	11088.348017934288	0.9439748309048825	0.8465959133705657	1.0345119222799235	0.9446876971566638	0.854877112726055	0.8449346905858366	0.7740583108579586	0.9203442551890445	0.9358261154472537	1.0	13.436756823149901	-5.870418162559775	17.609703249221877	0.9009262037679893	9.183070026792734	0.01828580398598112	0.07448067212246882	883.5597230726639	120144.7662677214	0.01884223125642469	176.08160297405396	1.3476646522058425e-06	5.870418162559775	8.282143823024745	
MAS(ph)RPRPRT(ph)PS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	MASRPRPRTPSR	12	3	B1APH4	B1APH4	ZNF487	Putative zinc finger protein 487	3	MAS(1)RPRPRT(1)PS(1)R	51.092	0.034108	0.0	465.16	572.66	824.71	614.42	613.41	525.01	702.43	480.4	496.92	619.01	True	False	444.7121233668572	667.2823314443252	651.6146413289857	560.5547525485906	694.084166806996	626.4607521505836	859.9678083164325	463.50405970668777	473.8182976619873	506.9012906704601	0.8773150346069398	1.3163950136361555	1.2854862540734873	1.1058459760620554	1.3692688884042015	1.2358633992073418	1.6965192713930242	0.9143872154944163	0.9347348416400456	1.0	8.985561027092333	-12.271186419519587	11.890575706582243	0.999999999547443	1.209741579466048	0.051935645267099595	0.23756276100716947	2.9536247925402212e-09	1.4515088902582008e-10	0.23165008752121477	0.05618339876667903	5.355667178629469e-13	12.271186419519587	0.20974157991860498	
MAS(ph)S(ph)LNEDPEGSRITYVK	ddPTM_K562_Methotrexat_30min_R1	1	MASSLNEDPEGSRITYVK	18	1	C9JA90;C9J5P1;C9IZY1;C9JNE2;Q9Y530	C9JA90	OARD1	O-acetyl-ADP-ribose deacetylase 1	2	MAS(1)S(1)LNEDPEGSRITYVK	68.257	0.026414	0.0	1367.9	1380.7	1853.3	1522.2	1292.3	1264.6	1208.2	1682.4	1616.9	1931.8	True	False	1307.7687538772125	1608.8372071127358	1464.3176568430215	1388.7510893679637	1462.260101342791	1508.9660523982946	1479.1696055235602	1623.229038406603	1541.7306719183523	1581.9323004752675	0.8266907208888227	1.017007622026167	0.9256512787576874	0.8778827570248957	0.9243506191152915	0.9538752397589635	0.9350397643939417	1.026105249838396	0.9745870107432301	1.0	10.627472144992081	-9.007294593128233	1.7808175408583573	1.0006671797091398	0.9213061491397125	0.3460832642822639	0.047930293952626817	0.43782443589019887	2.7191057876041884	0.029417223879016498	0.014681178767294942	9.833438520274503e-10	9.007294593128233	-0.07936103056942723	
MASPPPS(ph)GPPSATHTPFHQSPVEEK	ddPTM_K562_Methotrexat_30min_R1	1	MASPPPSGPPSATHTPFHQSPVEEK	25	0	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	MAS(0.15)PPPS(0.714)GPPS(0.127)AT(0.009)HTPFHQSPVEEK	85.06200000000001	0.0038924999999999997	31547000.0	2000.4	1097.4	2538.0	2014.7	1401.3	1381.7	1308.1	1816.9	2082.3	2418.0	True	False	1912.4648112113277	1278.7266973893793	2005.3084838221494	1838.0743790235435	1585.595511887063	1648.693970108115	1601.4747235435927	1752.9985971712763	1985.4943275005153	1980.0767691009403	0.9658538704434617	0.6457965253387569	1.0127427961960613	0.9282844017498002	0.8007747662263657	0.8326414388754783	0.808794259159329	0.8853185010433866	1.0027360345235679	1.0	10.951340650448879	-9.702543874910043	3.9916468114953028	1.0046199188447287	0.8536888430488411	0.260875525742723	0.09595391892020554	0.2838011775049889	8.680815277409291	0.07683520967686953	0.024203704924857496	1.983609251173069e-10	9.702543874910043	-0.1509310757958876	
MAT(ph)ES(ph)T(ph)PS(ph)EIIERER	ddPTM_K562_Methotrexat_30min_R1	1	MATESTPSEIIERER	15	1	A0A0B4J1T5;Q9BX69	A0A0B4J1T5	CARD6	Caspase recruitment domain-containing protein 6	4	MAT(1)ES(1)T(1)PS(1)EIIERER	71.03	0.032739	12046000.0	0.0	0.0	0.0	0.0	0.0	0.0	146.92	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	179.87054994497706	0.0	0.0	0.0											0.0														
MATADT(ph)PAPAS(ph)S(ph)GLS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	MATADTPAPASSGLSPK	17	0	O60293-2;O60293;G3V1X1;O60293-4	O60293-2	ZFC3H1	Zinc finger C3H1 domain-containing protein	4	MAT(0.027)ADT(0.973)PAPAS(1)S(1)GLS(1)PK	45.763999999999996	0.034177	0.0	863.86	714.27	707.01	841.98	786.36	732.29	750.4	823.63	828.25	938.2	True	False	825.885748756758	832.290976985887	558.6182628633164	768.1649206582829	889.7801232623359	873.7946785629819	918.6963019242501	794.6624660620724	789.744838280892	768.2828886561219	1.0749761070448864	1.083313177053478	0.7270997065162415	0.999846452394579	1.1581412737419372	1.1373345566649555	1.1957786845041294	1.0343357606884798	1.02793495721649	1.0	9.585493811808375	-7.585782924467095	7.074314091623649	1.1002409210912711	0.9560817363310529	0.23465949888476434	0.10783734592285185	0.3022517841547899	27.784445310916606	0.03336069565146353	0.04323261771501876	2.5954763475771432e-08	7.585782924467095	-0.14415918476021827	
MCSPS(ph)PDATSGTGSQR	ddPTM_K562_Methotrexat_30min_R1	1	MCSPSPDATSGTGSQR	16	0	A0A2R8Y589;A0A2R8Y4C1;A0A2R8Y7U5;A8MST6;A0A2U3TZI9;A0A2R8Y5W6;A0A2R8Y432;A0A2R8YCP0;A0A2R8Y7A4;Q5JTW2;Q5JTW2-3;Q5JTW2-5;Q5JTW2-2	A0A2R8Y589	CEP78	Centrosomal protein of 78 kDa	1	MCS(0.025)PS(0.974)PDAT(0.001)SGTGSQR	99.796	0.0019562	945970.0	371.87	260.88	405.48	490.12	323.41	325.65	372.51	399.32	468.69	406.61	True	False	355.52304006456535	303.9859857981971	320.37528921205865	447.1519405603907	365.94408370755383	388.57725364819294	456.0548499864104	385.27568926326927	446.9007042002671	332.9689888685414	1.0677361915073973	0.9129558486247288	0.9621775598404005	1.3429236821118185	1.0990335314741015	1.1670073389375193	1.3696616358662284	1.157091807776066	1.3421691483007951	1.0	8.37924400764508	-7.243752042246168	24.70738182526134	1.2177689881864957	0.9741564230708499	0.45145589215147486	0.11603299946104619	586.921074973729	819866.9471027253	0.029814645003335274	0.051499096999803005	5.7048989700062815e-08	7.243752042246168	-0.24361256511564577	
MCWS(ph)GMIT(ph)S(ph)LIS(ph)IPLSLLPPVR	ddPTM_K562_Methotrexat_30min_R1	1	MCWSGMITSLISIPLSLLPPVR	22	0	Q6ZS86-2;Q6ZS86	Q6ZS86-2	GK5	Putative glycerol kinase 5	4	MCWS(1)GMIT(0.997)S(0.874)LIS(0.965)IPLS(0.164)LLPPVR	47.082	0.029274	0.0	538.85	503.98	729.25	607.79	630.78	754.4	546.83	577.07	597.46	728.54	True	False	515.1627992007717	587.2541288047197	576.1903907908991	554.5059943548515	713.7386262671246	900.1771231450841	669.4705474163618	556.7741210136104	569.6842150067033	596.5943463030598	0.8635060026852447	0.9843441065839478	0.9657992811386854	0.9294523117608827	1.1963549951319141	1.5088596275228687	1.1221536904680658	0.9332541021613682	0.9548937540841419	1.0	9.220606495642308	-7.752362643986694	24.619765717320806	1.1355407976178635	0.9413891222599542	0.24489620615371632	0.15614684848125884	255.50785799425117	693035.867145489	0.05196375552326312	0.06607512965829068	1.7686315012841712e-08	7.752362643986694	-0.19415167535790934	
MDAPASGSACSGLNKQEPGGSHGS(ph)ETEDTGR	ddPTM_K562_Methotrexat_30min_R1	4	MDAPASGSACSGLNKQEPGGSHGSETEDTGR	31	1	Q9UKJ3-2;Q9UKJ3	Q9UKJ3-2	GPATCH8	G patch domain-containing protein 8	1	MDAPASGSACS(0.002)GLNKQEPGGS(0.06)HGS(0.436)ET(0.357)EDT(0.145)GR;MDAPASGS(0.001)ACS(0.001)GLNKQEPGGS(0.041)HGS(0.808)ET(0.1)EDT(0.048)GR;MDAPAS(0.002)GS(0.002)ACS(0.004)GLNKQEPGGS(0.074)HGS(0.752)ET(0.146)EDT(0.02)GR;MDAPAS(0.124)GS(0.113)ACS(0.113)GLNKQEPGGS(0.062)HGS(0.552)ET(0.029)EDT(0.008)GR	61.519	0.00029629	142542000.0	6653.200000000001	4782.49	9069.5	7605.500000000001	4539.59	5021.35	5134.66	5505.02	5349.0	8074.0	True	False	6360.733294316745	5572.715184069376	7165.93589205082	6938.737623300514	5136.625654611714	5991.654821453567	6286.238211138551	5311.405326324962	5100.326157518249	6611.720361340359	0.9620390680024566	0.8428540348823296	1.083823195843405	1.0494602378939482	0.7768969910836327	0.9062172163976564	0.950771942487927	0.8033318162367364	0.7714068168007466	1.0	12.690809992680265	-7.755614685609944	24.999811032988166	0.8643097658032615	0.9815147661838813	0.2825220661057507	0.0907324565789881	199.1867069487	854912.1256500689	0.027958415686534555	0.03511512895367901	1.7554372687406388e-08	7.755614685609944	0.11720500038061987	
MDFGSLETVVANSAFIAARGS(ph)FDGS(ph)SSQPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	MDFGSLETVVANSAFIAARGSFDGSSSQPSR	31	1	Q15835	Q15835	GRK1	Rhodopsin kinase	3	MDFGS(0.002)LET(0.002)VVANS(0.014)AFIAARGS(0.949)FDGS(0.735)S(0.412)S(0.239)QPS(0.647)R	41.232	0.020204	18565000.0	1239.1	959.95	858.47	921.06	1049.3	1150.1	1148.0	1220.4	1515.1	1077.9	True	False	1184.6306476564464	1118.5654211399085	678.2888786866828	840.3120998379037	1187.3013420560167	1372.3405478912525	1405.468223093069	1177.4778402706954	1444.6633316986176	882.6818649354445	1.3420810993359256	1.267235077070169	0.7684409362327727	0.9519988267792954	1.345106758416126	1.554739711335997	1.592270419191017	1.3339776051214227	1.6366749891301708	1.0	9.785749747035714	-7.916722073222698	5.234912190907966	1.454632467233184	1.0754006298650154	0.3391025839711309	0.22397683756584502	0.22114448358553976	10.344539994858213	0.07121584890991513	0.08102436938634906	1.2113731038365451e-08	7.916722073222698	-0.3792318373681687	
MDMTS(ph)PEQSR	ddPTM_K562_Methotrexat_30min_R1	2	MDMTSPEQSR	10	0	Q96JM3	Q96JM3	CHAMP1	Chromosome alignment-maintaining phosphoprotein 1	1	MDMT(0.214)S(0.786)PEQSR;MDMT(0.216)S(0.784)PEQSR	92.11200000000001	0.0075455	35897000.0	7191.9	6521.900000000001	9114.7	7571.299999999999	6607.7	6198.6	6350.0	7862.4	7173.6	7961.9	True	False	6875.752687337912	7599.533121654638	7201.649029745369	6907.535884201593	7476.728369297191	7396.391722596923	7774.149143415498	7585.874935549259	6840.100901770973	6519.922757611569	1.0545757891550074	1.165586373363503	1.1045604829195148	1.0594505703518515	1.14675106550436	1.1344293479492737	1.1923682890782263	1.1634915347261228	1.049107659103111	1.0	12.670639157420458	-9.949400628881824	4.733862272674658	1.0006042220328975	1.128545259883586	0.5023876007575896	0.04236002589482668	0.14333042623404904	6.600640358150208	0.042257879375541166	0.011042822038720838	1.1235680243761166e-10	9.949400628881824	0.12794103785068844	
MDRT(ph)PPPPT(ph)LSPAAITVGR	ddPTM_K562_Methotrexat_30min_R1	2	MDRTPPPPTLSPAAITVGR	19	1	H7C4H9;E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7	H7C4H9	PHC3	Polyhomeotic-like protein 3	2	MDRT(1)PPPPT(0.967)LS(0.033)PAAITVGR;MDRT(1)PPPPT(0.793)LS(0.206)PAAIT(0.001)VGR	79.17699999999999	0.0049457	33358000.0	2831.5	2374.41	3182.2	3078.3	2903.3999999999996	2076.38	2522.8	2935.5	3057.1000000000004	3207.8999999999996	True	False	2707.0306503423685	2766.7408944307604	2514.2997073360284	2808.430218369073	3285.2479905893824	2477.611048457038	3088.6021195289145	2832.25680114276	2914.9760882686573	2626.918224813442	1.0304967336905266	1.0532268832339644	0.9571290356838529	1.069096933372763	1.2506091585027141	0.9431626097279798	1.1757511483815832	1.0781670987660459	1.1096561974157655	1.0	11.359155575163177	-7.513445401689789	24.953147055849957	1.0994920641600643	1.0168342241196933	0.15181050049052836	0.08283915521540261	764.3998358036143	2022000.0413499905	0.02277821783214186	0.031167120931969303	3.0658760887256226e-08	7.513445401689789	-0.08265784004037102	
MDS(ph)FDEDLARPSGLLAQER	ddPTM_K562_Methotrexat_30min_R1	3	MDSFDEDLARPSGLLAQER	19	1	Q9Y2W1;A0A3B3ITZ9	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	1	MDS(0.999)FDEDLARPS(0.001)GLLAQER;MDS(1)FDEDLARPSGLLAQER;MDS(1)FDEDLARPSGLLAQER	77.051	0.014339	40490000.0	1659.46	1496.1100000000001	1967.3899999999999	1728.02	1371.81	1216.92	1111.9499999999998	1590.8999999999999	1805.9599999999998	1959.49	True	False	1586.5121253812988	1743.316747978153	1554.4617249751216	1576.5271695241283	1552.227059988434	1452.0725672026986	1361.3330929166714	1534.947145269296	1722.0013137841963	1604.6073731536821	0.9887229436464454	1.0864444331648886	0.9687489606382621	0.9825002651119786	0.9673563053232764	0.9049394833259472	0.8483901518170881	0.956587368941552	1.0731605392039232	1.0	10.648004616215989	-6.9019563943715125	6.9899898372799685	0.9548571172209764	1.0370951888438553	0.19559468314335626	0.05964658255035205	0.3197483042959243	19.59698240605946	0.016493214460327404	0.03478828586237087	1.2532670037377048e-07	6.9019563943715125	0.08223807162287888	
MDYEDDRLR	ddPTM_K562_Methotrexat_30min_R1	1	MDYEDDRLR	9	1	D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991	D6REM6	MATR3	Matrin-3	0		76.221	0.015787	0.0	1148.6	1013.2	1015.2	991.62	1132.0	1046.8	1078.4	1263.7	1352.1	1558.6	False	True	1098.1089192948064	1180.6140785446694	802.12339352886	904.6862141893704	1280.877841615754	1249.0792848731094	1320.2586513794135	1219.2549547280214	1289.24116612085	1276.3224368572066	0.8603695175952324	0.9250123984749435	0.6284645402802713	0.7088226204164	1.0035691645206555	0.9786549611623374	1.034424071263994	0.9552875664634501	1.0101218382522947	1.0	10.31777712731586	-7.771973359524672	24.999572511277698	0.9957270114751428	0.7801060129751513	0.6547414812733292	0.0769596055522176	140.52191508801218	333490.0123540878	0.025818192066100816	0.0295793058522808	1.6905446297860653e-08	7.771973359524672	-0.2156209984999915	
MEEIS(ph)QLEAAES(ph)IAFR	ddPTM_K562_Methotrexat_30min_R1	1	MEEISQLEAAESIAFR	16	0	M0R300;M0R0P8;Q13459-2;Q13459;M0R240;M0R332;M0QXP0	M0R300	MYO9B	Unconventional myosin-IXb	2	MEEIS(1)QLEAAES(1)IAFR	64.5	0.028451999999999998	24838000.0	3391.6	3080.7	3634.6	4279.9	2828.2	3137.3	3047.7	3393.2	3577.2	3827.2	True	False	3242.509324987174	3589.733312053454	2871.7471297478255	3904.6878119734265	3200.1578724891124	3743.53882349294	3731.2243062027433	3273.8592327159313	3410.89675279011	3134.056993673747	1.0346044540773647	1.1453950324769182	0.916303416161414	1.2458892163911623	1.0210911540373366	1.194470563569668	1.190541305960424	1.044607433535632	1.0883327136919265	1.0	11.613815700510498	-6.221818819402853	20.511560086825455	1.0985248456720975	1.0346026690294292	0.031126199727098958	0.09669768559375069	7027.5890142285125	3637414.992391178	0.022878483700102856	3.947270206514542	6.000413515429588e-07	6.221818819402853	-0.0639221766426683	
MEGS(ph)DFESSGGR	ddPTM_K562_Methotrexat_30min_R1	1	MEGSDFESSGGR	12	0	E9PEN0;A0A1B0GW41;Q8WYH8-2;Q8WYH8	E9PEN0	ING5	Inhibitor of growth protein 5	1	MEGS(1)DFESSGGR	116.71	0.0010857999999999998	10250000.0	3658.6	2777.2	4210.1	3633.8	2952.6	2970.4	2913.6	3891.1	3859.5	3823.4	True	False	3497.7723246839455	3236.0850956713916	3326.4575444206585	3315.2303958384614	3340.918652963492	3544.3877605914076	3567.048967599274	3754.247807503524	3680.072687407309	3130.9452104964985	1.117161780077677	1.0335808767340966	1.0624451470018397	1.0588592814477067	1.067063914680799	1.1320503944651739	1.1392882109979878	1.199078091471356	1.1753871243322496	1.0	11.612382547135283	-8.303862965199507	3.539046320888258	1.1440370038678904	1.0644622053326727	0.22687297493019976	0.0534419693815358	0.283340659654668	7.381036726844944	0.018700831586885857	0.016878727527845958	4.967490380787618e-09	8.303862965199507	-0.07957479853521776	
MELAGSNTTAS(ph)SPAR	ddPTM_K562_Methotrexat_30min_R1	1	MELAGSNTTASSPAR	15	0	J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9	J3KPG5	BAZ2A	Bromodomain adjacent to zinc finger domain protein 2A	1	MELAGSNTTAS(0.554)S(0.445)PAR	136.57	1.1028e-05	28534000.0	2634.3	2428.6	3657.9	3161.2	2532.7	2471.8	2595.2	3073.2	2708.9	3610.8	True	False	2518.499326221756	2829.884870858253	2890.1567781611666	2884.062504079627	2865.79444298606	2949.4403671659848	3177.2396625184106	2965.113814093658	2582.9638302675635	2956.8491306326187	0.8517510413806342	0.9570609611227606	0.9774447902057204	0.975383719852687	0.9692055009830421	0.9974943721714172	1.0745356026462667	1.002795098125034	0.8735527976413655	1.0	11.529844918366885	-5.258332148469793	1.0630791491169607	0.9894057511737039	3.152836966504516e-14	0.4179231771714397	0.04650385923460277	12.659391796221406	2.2919156222863597	0.014914236138245662	23.301581289442534	5.516553718107903e-06	5.258332148469793	-0.9894057511736724	
MELAGSNTTASS(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	3	MELAGSNTTASSPAR	15	0	J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9	J3KPG5	BAZ2A	Bromodomain adjacent to zinc finger domain protein 2A	1	MELAGSNTTAS(0.116)S(0.884)PAR;MELAGSNTTAS(0.082)S(0.918)PAR;MELAGS(0.001)NT(0.001)T(0.001)AS(0.042)S(0.955)PAR	163.9	1.2699e-08	103102000.0	12327.5	10908.699999999999	14227.3	13004.8	11475.6	11148.8	11478.8	13469.0	13249.2	15265.4	True	False	11785.597860531714	12711.177258804018	11241.184157558255	11864.689375254564	12984.842543503315	13303.14781352057	14053.213100383911	12995.287635698123	12633.247583883118	12500.688135249577	0.9427959271536865	1.0168382029274774	0.8992452284174853	0.94912290002647	1.0387302205299014	1.064193240371161	1.124195160165344	1.039565781907147	1.010604172122313	1.0	13.609719893795743	-7.8087223555022955	4.804008478946352	1.0543009584820118	0.9525345403026514	0.5505992145553399	0.04148281527393136	0.1501981721404876	7.500598983154405	0.013362793489832818	0.015665331305464176	1.5533797684016355e-08	7.8087223555022955	-0.10176641817936039	
MEQTALS(ph)PEVR	ddPTM_K562_Methotrexat_30min_R1	1	MEQTALSPEVR	11	0	P12980	P12980	LYL1	Protein lyl-1	1	MEQT(0.007)ALS(0.993)PEVR	83.243	0.021648	123010000.0	3994.5	3966.2	5177.4	4359.4	3818.9	3737.0	3498.4	4417.8	4515.2	4337.5	True	False	3818.9065628792487	4621.547136126987	4090.734493357285	3977.2181704051354	4321.152287408483	4459.122361072614	4283.005254066894	4262.423469967125	4305.289337525967	3551.936718765645	1.0751617681427557	1.3011344238511797	1.1516912651469988	1.1197322715217974	1.2165622953187503	1.2554059134877353	1.2058225112623366	1.2000279868297838	1.2120962951789649	1.0	11.794390163552741	-12.231131769242099	6.150332086762556	0.999996340577352	1.195978848812926	0.4699198323927605	0.0614473043601171	2.9739392048327447e-06	3.7178743746258183e-07	0.057385695970201024	0.013917815811550854	5.873111294871228e-13	12.231131769242099	0.19598250823557395	
MEREDS(ph)S(ph)EEEEEEIDDEEIER	ddPTM_K562_Methotrexat_30min_R1	3	MEREDSSEEEEEEIDDEEIER	21	1	P55081	P55081	MFAP1	Microfibrillar-associated protein 1	2	MEREDS(1)S(1)EEEEEEIDDEEIER;MEREDS(1)S(1)EEEEEEIDDEEIER;MEREDS(1)S(1)EEEEEEIDDEEIER	114.56	2.2704e-05	287330000.0	4313.0	3886.6800000000003	5550.56	4967.650000000001	3984.29	4198.73	3983.23	4125.03	4602.05	5403.35	True	False	4123.405684240383	4528.887807735878	4385.573308890415	4532.143837274187	4508.293971352679	5010.075148810923	4876.570723232582	3979.95035681074	4388.10169998259	4424.7509554679755	0.9318955407297673	1.0235350765084785	0.9911457962330862	1.0242709438083737	1.018880840238356	1.1322840989772816	1.102111909192598	0.8994744329943442	0.9917172162107574	1.0	12.111380540892188	-3.0200082430300523	23.207207626655922	1.0149347406286566	0.005075685803965557	0.0	0.06565214234501607	0.0	0.0	0.0159096050394492	0.0	0.0009549744601685685	3.0200082430300523	-1.009859054824691	
MES(ph)PASSQPAS(ph)MPQSKGR	ddPTM_K562_Methotrexat_30min_R1	1	MESPASSQPASMPQSKGR	18	1	J3QL77	J3QL77	MAP2K3		2	MES(0.819)PAS(0.179)S(0.001)QPAS(0.96)MPQS(0.04)KGR	75.868	0.013711000000000001	0.0	1288.2	1427.1	2196.9	1811.8	1612.0	1637.6	1490.2	944.61	1026.3	1006.3	True	False	1231.5722704471275	1662.9040184475878	1735.800712414846	1652.9623070009704	1824.0062550217276	1954.0430234125006	1824.4152840185477	911.3875308899547	978.5875370089705	824.049318753629	1.4945370894910455	2.0179666199624107	2.106428186895703	2.005902158260465	2.213467341712665	2.371269508926944	2.2139637064174362	1.1059866322909222	1.1875351568630381	1.0	9.686586874018225	-9.266299674642253	24.8505009491657	1.1100705638055244	2.076370688244351	0.7984688241621499	0.2215031201576306	173.05149368617668	884797.3116021379	0.12343761029043164	0.06228894590461221	5.41627024501433e-10	9.266299674642253	0.9663001244388267	
MESLSSHRIDEDGENTQIEDT(ph)EPMSPVLNSK	ddPTM_K562_Methotrexat_30min_R1	1	MESLSSHRIDEDGENTQIEDTEPMSPVLNSK	31	1	A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	MES(0.007)LS(0.007)S(0.007)HRIDEDGENT(0.018)QIEDT(0.479)EPMS(0.479)PVLNS(0.003)K	47.286	0.005469600000000001	66668000.0	2560.1	1775.0	3301.6	2542.0	1960.3	1766.0	1773.3	2073.0	2482.3	3448.5	True	False	2447.561069377187	2068.288580158692	2608.639279033574	2319.1468067096066	2218.1138099994355	2107.2545061959413	2171.007665514757	2000.0914150124147	2366.898414807919	2823.943233351775	0.8667175177144567	0.7324115285787149	0.9237576903900246	0.8212441310149784	0.7854668549292074	0.7462099383969605	0.7687858735524083	0.7082619053352854	0.8381536805889035	1.0	11.463495372639091	-5.872177246996071	17.418034365941292	0.8036978517531194	11.482665308881423	0.021293944085153726	0.08572619774143277	560.9062175652285	76451.6225802191	0.019773343293257	56.76586255808196	1.3422170552696815e-06	5.872177246996071	10.678967457128303	
MESLSSHRIDEDGENTQIEDTEPMS(ph)PVLNSK	ddPTM_K562_Methotrexat_30min_R1	2	MESLSSHRIDEDGENTQIEDTEPMSPVLNSK	31	1	A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	MESLSSHRIDEDGENTQIEDT(0.004)EPMS(0.962)PVLNS(0.034)K;MESLSSHRIDEDGENTQIEDT(0.004)EPMS(0.971)PVLNS(0.025)K	97.839	7.422899999999999e-10	65099000.0	2779.9	2180.0	3443.8	3406.1	2172.77	1916.69	1829.72	2574.3999999999996	2762.5	3589.4	True	False	2657.6989245582727	2540.207946335746	2720.99344231155	3107.4925013114066	2458.5273391585356	2287.063216013986	2240.081286722868	2483.85689281619	2634.0719779667556	2939.324878002858	0.9041868574813895	0.8642147607928612	0.9257205498700591	1.057213009887771	0.8364258600869587	0.7780913342141156	0.7621074157154429	0.8450433333874483	0.8961486352459589	1.0	11.521269110810369	-7.90447608200006	23.014285603178593	0.8368750807312106	0.9336032229933381	0.2062538611318413	0.0776261959024883	12.093158183388677	2901.5384783147692	0.024445901080344654	0.02771904675731254	1.2460168575542845e-08	7.90447608200006	0.09672814226212745	
MET(ph)AKEMT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	METAKEMTR	9	1	Q86V25-3	Q86V25-3			2	MET(1)AKEMT(1)R	94.465	0.014153	11295000.0	2140.5	1908.1	2346.6	2398.3	2293.6	1716.2	1769.2	2533.8	2651.5	2287.4	True	False	2046.4061829623308	2223.3810928455223	1854.0807281863883	2188.0447626009645	2595.2486020582087	2047.8313610042321	2165.988136146566	2444.6848178284895	2528.232343738949	1873.1296946408143	1.0925064018883879	1.1869872647936806	0.9898304070941127	1.1681224043701564	1.3855146333344877	1.0932672557929408	1.156347124464283	1.3051337688057285	1.3497369407854887	1.0	10.871235079244265	-7.519160817524966	24.99546019832169	1.2262901956068843	1.0960760136567103	0.17872179429745627	0.11839254388279993	247.94665449450858	1666940.0800862585	0.03415503052350191	0.045110662966081364	3.0257927815568266e-08	7.519160817524966	-0.1302141819501741	
METEADAPS(ph)PAPSLGER	ddPTM_K562_Methotrexat_30min_R1	1	METEADAPSPAPSLGER	17	0	Q12873-2;Q12873;Q12873-3	Q12873-2	CHD3	Chromodomain-helicase-DNA-binding protein 3	1	MET(0.002)EADAPS(0.997)PAPS(0.001)LGER	190.18	2.6277e-09	57549000.0	3486.6	3126.1	5029.8	3740.2	3562.9	3286.2	3035.2	4158.8	3509.9	4173.6	True	False	3333.3332387369605	3642.6348903854027	3974.113716283943	3412.302473035121	4031.483800258628	3921.211641144451	3715.92086300704	4012.532646769722	3346.725515100639	3417.720596989117	0.9753088774060412	1.0658082739690384	1.1627965491927537	0.9984146966376451	1.179582615328536	1.1473177896984588	1.0872512124837315	1.1740376467007314	0.9792273593250946	1.0	11.738818744340136	-5.036761330659303	14.133197533789248	1.0867901069248356	0.7529218717535515	0.0	0.08089756325327048	0.0	0.0	0.017757614333412133	0.0	9.18837410799238e-06	5.036761330659303	-0.33386823517128406	
METVSNASSSS(ph)NPSS(ph)PGR	ddPTM_K562_Methotrexat_30min_R1	4	METVSNASSSSNPSSPGR	18	0	Q9NTI5-2;Q9NTI5;A9IYQ1	Q9NTI5-2	PDS5B	Sister chromatid cohesion protein PDS5 homolog B	2	METVS(0.001)NAS(0.073)S(0.095)S(0.359)S(0.473)NPS(0.084)S(0.914)PGR;METVS(0.01)NAS(0.07)S(0.091)S(0.346)S(0.484)NPS(0.108)S(0.891)PGR;METVSNAS(0.008)S(0.011)S(0.049)S(0.932)NPS(0.016)S(0.984)PGR;METVS(0.001)NAS(0.013)S(0.017)S(0.071)S(0.898)NPS(0.028)S(0.972)PGR	140.3	1.592e-08	69687000.0	12408.8	11329.9	14890.0	13390.7	12491.399999999998	11389.7	11168.8	13443.699999999999	12512.8	13741.599999999999	True	False	11863.324009877591	13201.973399628152	11764.792483889598	12216.758121402963	14134.238048373702	13590.598329116609	13673.687709130543	12970.877451038294	11931.082659150192	11252.863081173473	1.0542493874048326	1.1732101692160126	1.0454932579400709	1.0856577595653971	1.256057053784018	1.207745818204637	1.2151296617131346	1.152673533612893	1.060270846013528	1.0	13.45800449454687	-6.247803419756868	23.428423403930978	1.1422334796879288	1.054249244238978	0.07048935105225962	0.07945929556974077	2527.3311298405492	4342117.482321115	0.020325852017357895	0.36699815602317276	5.651927473134632e-07	6.247803419756868	-0.08798423544895084	
METVSNASSSSNPS(ph)SPGR	ddPTM_K562_Methotrexat_30min_R1	1	METVSNASSSSNPSSPGR	18	0	Q9NTI5-2;Q9NTI5;A9IYQ1	Q9NTI5-2	PDS5B	Sister chromatid cohesion protein PDS5 homolog B	1	METVSNASSSS(0.002)NPS(0.499)S(0.499)PGR	200.71	2.7300000000000004e-20	3274300.0	1396.2	1099.9	1455.4	1311.2	1292.7	1076.7	1274.9	1222.9	1197.2	1328.3	True	False	1334.824719762675	1281.639779896646	1149.9314292177924	1196.2491317693302	1462.7127083539617	1284.757036705079	1560.8287784158135	1179.8899138536822	1141.5424333110577	1087.731998509834	1.2271632365245775	1.1782679756157406	1.0571826799185553	1.0997645866887817	1.3447363048598753	1.1811338072844821	1.4349387354183847	1.0847248361453945	1.0494703059898418	1.0	10.087107425764394	-9.504872375309192	24.71130807998152	1.0388558684862181	1.2125111075457098	0.3746332266816449	0.10382220744110655	726.5309765061513	997073.3892086116	0.06143414079069164	0.028551852796700937	3.126998152778142e-10	9.504872375309192	0.17365523905949165	
METVSNASSSSNPSS(ph)PGR	ddPTM_K562_Methotrexat_30min_R1	10	METVSNASSSSNPSSPGR	18	0	Q9NTI5-2;Q9NTI5;A9IYQ1	Q9NTI5-2	PDS5B	Sister chromatid cohesion protein PDS5 homolog B	1	METVSNASSSS(0.002)NPS(0.071)S(0.926)PGR;METVS(0.01)NAS(0.055)S(0.055)S(0.055)S(0.167)NPS(0.045)S(0.611)PGR;METVSNASSSSNPS(0.226)S(0.774)PGR;METVSNASSSSNPS(0.029)S(0.971)PGR;METVSNASSSSNPS(0.042)S(0.958)PGR;METVSNASSSSNPS(0.145)S(0.855)PGR;METVSNASSSSNPS(0.055)S(0.945)PGR;METVSNASSSSNPS(0.006)S(0.994)PGR;METVSNASSSSNPS(0.008)S(0.992)PGR;METVSNASSSSNPS(0.033)S(0.967)PGR	344.39	0.0	1089022900.0	30867.7	28433.4	39057.5	32445.6	30431.0	28455.9	28585.7	32818.5	30964.800000000003	34269.7	True	False	29510.79286794037	33131.53606483614	30859.864502318196	29601.14462304375	34433.2098924108	33954.59994499496	34996.770892745255	31664.254753297137	29525.25320664073	28063.125249817407	1.0515861154178607	1.1806074972013927	1.0996588664877582	1.0548057053352013	1.2269912771969274	1.2099365142952454	1.2470731816647171	1.1283224684144244	1.0521013944030642	1.0	14.776388063180944	-9.838230501329448	2.91064301071858	1.0041915650819697	1.1550177591944781	0.38601204877369777	0.06438651794254018	0.26521616408319815	4.272473247805202	0.06496772460688247	0.017833403752606405	1.4513411153972694e-10	9.838230501329448	0.15082619411250842	
MFDRNT(ph)KRDIT(ph)LEAS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	MFDRNTKRDITLEASR	16	3	E5RFR9;A0A590UJJ1;A0A590UJY3;P63151;P63151-2	E5RFR9	PPP2R2A	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform	3	MFDRNT(1)KRDIT(1)LEAS(1)R	56.527	0.033675	164140000.0	2701.3	2152.7	2489.5	2528.2	2100.2	2026.4	2364.9	2608.6	2643.1	2378.1	True	False	2582.5540864452933	2508.3970853564033	1966.9879710304344	2306.556631283726	2376.413112156719	2417.9731208128305	2895.2890250808377	2516.854059431446	2520.2228579054954	1947.4030457398453	1.3261528434470253	1.2880728983369893	1.0100569449829264	1.184426940447468	1.2202985495762573	1.2416397961903203	1.4867436052411418	1.292415591593808	1.2941454843766191	1.0	10.927335788090387	-8.530260975143161	24.98894628382592	1.3029080578112042	1.2015759629716067	0.020390151600102158	0.1364041612185258	427.2648167572753	1446280.648995362	0.05147359472338766	0.039951825193841654	2.949436326208594e-09	8.530260975143161	-0.10133209483959749	
MFPAAPSPRT(ph)PGT(ph)GSRR	ddPTM_K562_Methotrexat_30min_R1	1	MFPAAPSPRTPGTGSRR	17	2	Q8WUM0	Q8WUM0	NUP133	Nuclear pore complex protein Nup133	2	MFPAAPS(0.02)PRT(0.962)PGT(0.843)GS(0.175)RR	52.555	0.030805000000000003	0.0	386.85	231.95	312.53	338.74	403.17	401.9	306.15	495.47	326.88	466.09	True	False	369.84453720111105	270.2757950241177	246.9342239751523	309.04319012777813	456.19392173517974	479.5614869989521	374.8119307490794	478.0440392649308	311.6834201476101	381.67658449555705	0.9689998082798718	0.7081277867263662	0.6469724211704341	0.8096991083071683	1.1952368582896133	1.2564603291888201	0.9820144750154105	1.2524845869094585	0.8166165617928764	1.0	8.576206871040409	-7.685443405943904	6.2310961325005705	1.0994366070344355	0.7634784420018907	0.49288929765994816	0.14858847128223204	0.16170501766804862	10.3104685813527	0.043203692888251655	0.05568509684990285	2.0632725202612162e-08	7.685443405943904	-0.3359581650325447	
MFYFHCPPQLEGTATFGNHSSGDFDDGFLRR	ddPTM_K562_Methotrexat_30min_R1	1	MFYFHCPPQLEGTATFGNHSSGDFDDGFLRR	31	1	A6NNA5	A6NNA5	DRGX	Dorsal root ganglia homeobox protein	0		40.28	0.017669	44297000.0	1236.5	1466.0	1306.6	1158.9	1284.8	1183.5	1280.2	1111.7	1309.0	1456.7	False	True	1182.1449405432945	1708.2315822606429	1032.362515745477	1057.3010363083258	1453.7737198833222	1412.1946251885029	1567.3174383307912	1072.6008808824413	1248.1448757134779	1192.8775142883956	0.9910027864415707	1.432025972322631	0.8654388261826924	0.8863450133344603	1.2187116468119217	1.1838555159881103	1.3138963720560746	0.8991710113022755	1.0463311285216501	1.0	10.220230198105332	-9.294611330034638	24.96534178976461	0.9795633167071106	1.1253925934125846	0.1305369944342184	0.17198923232385466	1461.653341119059	1100037.5787828024	0.09664925089298262	0.046432996140309976	5.074446405050068e-10	9.294611330034638	0.14582927670547396	
MGAGLGHGMDR	ddPTM_K562_Methotrexat_30min_R1	4	MGAGLGHGMDR	11	0	A0A087X0X3;P52272-2;P52272;M0R2T0;M0QZM1	A0A087X0X3	HNRNPM	Heterogeneous nuclear ribonucleoprotein M	0	;;;	67.214	0.023271	26654000.0	13267.21	12268.76	14703.26	15388.900000000001	12582.47	11004.47	11218.78	13002.799999999997	12817.849999999999	14032.15	False	True	12683.999334108705	14295.964056736773	11617.246657936505	14039.779029808613	14237.285349642207	13130.92808369086	13734.876996404237	12545.4841539428	12221.950951232993	11490.791660686416	1.1038403365631129	1.2441235102754258	1.0110048986165792	1.2218286993961502	1.2390169250350611	1.1427348499073273	1.195294232284755	1.0917858859859775	1.0636300189000991	1.0	13.48819057575819	-9.716064306211225	1.6632219411050218	1.0064997249025733	1.1667818410910205	0.39866379465324875	0.06731712440683386	0.3533912090504291	1.8714944265244375	0.06126890397487678	0.018572068582035372	1.9228069967921403e-10	9.716064306211225	0.16028211618844712	
MGDSGSRRST(ph)LVSRLPIFR	ddPTM_K562_Methotrexat_30min_R1	1	MGDSGSRRSTLVSRLPIFR	19	3	E7EUW0;Q9C0I3-2;Q9C0I3	E7EUW0	CCSER1	Serine-rich coiled-coil domain-containing protein 1	1	MGDS(0.002)GS(0.021)RRS(0.075)T(0.635)LVS(0.267)RLPIFR	48.623000000000005	0.031694	62530000.0	939.34	861.72	1074.9	908.24	896.15	1035.7	759.26	1041.1	909.83	1002.1	True	False	898.0477383339573	1004.1045832644221	849.2931793776314	828.6160093335699	1014.0094326536735	1235.8343669689343	929.5433824613618	1004.4839228989022	867.5322018872371	820.6099794524617	1.0943660945156488	1.2236075704738494	1.0349535109776609	1.0097561936627313	1.2356776764160902	1.505994806197122	1.1327468660344395	1.2240698359153848	1.0571796878050197	1.0	9.680552888751741	-6.223098281064073	20.864685632587378	1.1692236490742773	1.094364479445875	0.012149758574524383	0.14483647929631938	10836.640308217478	5896138.240792259	0.03774594886716823	5.884078772749308	5.982761895310862e-07	6.223098281064073	-0.07485916962840244	
MGMGNNYSGGYGT(ph)PDGLGGYGR	ddPTM_K562_Methotrexat_30min_R1	3	MGMGNNYSGGYGTPDGLGGYGR	22	0	P31942-4;P31942-3;P31942;P31942-2	P31942-4	HNRNPH3	Heterogeneous nuclear ribonucleoprotein H3	1	MGMGNNY(0.04)S(0.048)GGY(0.401)GT(0.511)PDGLGGYGR;MGMGNNY(0.063)S(0.272)GGY(0.012)GT(0.654)PDGLGGYGR;MGMGNNY(0.023)S(0.031)GGY(0.396)GT(0.55)PDGLGGYGR	78.456	0.0014605	37582000.0	3836.3	3365.26	4074.0	4090.9	3847.5	3401.7700000000004	3377.62	4404.5	4337.6	4802.7	True	False	3667.66084545592	3921.3120153604755	3218.923074504113	3732.257148531996	4353.513688707257	4059.1139080080216	4135.137264532766	4249.591238505633	4135.945922761484	3932.8844908854758	0.9325625641830529	0.9970575094305923	0.8184636701037166	0.9489872273598584	1.1069518311042685	1.0320958872336792	1.0514260650461549	1.080527853882851	1.0516316795844391	1.0	11.941372099502825	-7.6327415148651125	5.920587306936587	1.0560797476552821	0.917944334623284	0.6355415963281574	0.04842421416918679	0.12966984118357466	6.278469670587613	0.014180045634472623	0.018366249235560742	2.3294773128128558e-08	7.6327415148651125	-0.13813541303199817	
MGPIGAEADENQTVEEMKVEQYGPQT(ph)T(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	MGPIGAEADENQTVEEMKVEQYGPQTTPR	29	1	P49146	P49146	NPY2R	Neuropeptide Y receptor type 2	2	MGPIGAEADENQT(0.001)VEEMKVEQY(0.292)GPQT(0.79)T(0.917)PR	45.489	0.032449	19610000.0	617.44	679.02	969.89	838.15	856.36	779.32	664.94	929.47	728.97	828.77	True	False	590.298076901781	791.2165136334391	766.3233433310739	764.6706908118241	968.9863502173736	929.9125604578827	814.0697214838898	896.7800132713888	695.080343811195	678.6717220545024	0.8697844004974995	1.1658309723561733	1.1291517215587368	1.1267165935497978	1.4277688589765005	1.3701949414406334	1.1995044069605627	1.3213752453934875	1.0241775533346515	1.0	9.406570091949524	-5.618021132463524	1.040559729106926	1.2327353654839648	6.011384004683275e-13	0.33706572193971507	0.13470939298976123	6.523126809408186	2.2192794081869422	0.042244817244067714	12.311698192943382	2.409788167239192e-06	5.618021132463524	-1.2327353654833637	
MGPSGGEGMEPERRDS(ph)QDGSSYR	ddPTM_K562_Methotrexat_30min_R1	1	MGPSGGEGMEPERRDSQDGSSYR	23	2	C9J9W2;Q14847;Q14847-2;Q14847-3	C9J9W2	LASP1	LIM and SH3 domain protein 1	1	MGPSGGEGMEPERRDS(0.91)QDGS(0.031)S(0.031)Y(0.028)R	45.424	0.028495999999999997	142090000.0	886.86	738.54	996.13	807.85	754.58	786.5	685.79	543.54	902.46	799.94	True	False	847.8746962961803	860.5711819664225	787.0559259218904	737.0270447680392	853.8204962247491	938.479993840945	839.5958647343165	524.4233901185955	860.5048315785976	655.063114422914	1.2943404652590247	1.313722545230704	1.2014963269840908	1.125123714861174	1.303417147791832	1.4326558360223205	1.281702245552276	0.8005692559572566	1.3136212566886323	1.0	9.35549010478863	-9.138545640976613	23.972878524455105	1.0424316734491423	1.2782310902415812	0.3915924109658422	0.13754457298099673	11.153297320520162	2126.8164305256914	0.06297520936140567	0.036358754026420546	7.268660072287481e-10	9.138545640976613	0.23579941679243888	
MGQAPSQSLLPPAQDQPRS(ph)PVPSAFSDQSR	ddPTM_K562_Methotrexat_30min_R1	1	MGQAPSQSLLPPAQDQPRSPVPSAFSDQSR	30	1	Q9UQ35;I3L3Q8	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	MGQAPSQS(0.001)LLPPAQDQPRS(0.94)PVPS(0.037)AFS(0.003)DQS(0.02)R	69.72	7.133399999999999e-05	30013000.0	294.24	320.31	256.54	372.0	396.54	253.5	285.64	418.04	284.93	463.46	True	False	281.3055619130279	373.2357831609189	202.6957598265304	339.38733756725946	448.69196052501	302.4852872710481	349.7020411535752	403.33729625267216	271.68366649124613	379.5229029807782	0.7412083953396489	0.9834341491106856	0.5340804421407906	0.8942473165695839	1.1822526572203602	0.7970145803990336	0.9214253959563716	1.0627482375499748	0.715855787246142	1.0	8.56804314002622	-7.50820044080345	24.83235476699859	0.9497990059014771	0.7656608954742955	0.22988046531381168	0.1580640888534268	934.8065351317423	1581480.948407983	0.04366764100835324	0.06215588452233524	3.103127065116777e-08	7.50820044080345	-0.18413811042718164	
MGVPNSHWQLS(ph)DANR	ddPTM_K562_Methotrexat_30min_R1	1	MGVPNSHWQLSDANR	15	0	Q9Y217;Q9Y217-2	Q9Y217	MTMR6	Myotubularin-related protein 6	1	MGVPNS(0.149)HWQLS(0.851)DANR	74.649	0.031198000000000004	0.0	0.0	126.56	186.77	216.61	136.67	118.76	169.81	0.0	145.95	131.83	True	False	0.0	147.47188884782202	147.56952936306652	197.62013760872074	154.6445005420716	141.7086892162118	207.8942151249426	0.0	139.16481635628875	107.95430954118157	0.0	1.366058376683569	1.3669628381697243	1.83059053824372	1.432499556519131	1.312672831853497	1.9257611484758441	0.0	1.289108484392661	1.0	6.754277026739506	-9.252503328228032	24.99190074749456	0.7334156522938048	1.346631508158777	0.162386846937291	0.5753348540954505	1046.806083282159	2927664.651635737	0.27073756129458815	0.15332346548557793	5.591092428046632e-10	9.252503328228032	0.6132158558649722	
MHLKTEPDS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	MHLKTEPDSR	10	1	D6RF73;D6RE68;A9YTQ3;A9YTQ3-3;A9YTQ3-2	D6RF73	AHRR	Aryl hydrocarbon receptor repressor	1	MHLKTEPDS(1)R	106.16	0.009051299999999998	46543000.0	2869.4	2756.1	3232.5	2294.4	2824.2	2628.1	2305.9	3277.4	2926.7	2599.8	True	False	2743.264611722547	3211.498679310067	2554.0424247262013	2093.253514285807	3195.6318023773943	3135.943130086949	2823.056773197132	3162.1319843519955	2790.638355806443	2128.9510274229206	1.2885522383496293	1.5084887524151096	1.1996717593912203	0.9832323465043133	1.5010358440446059	1.4729991858398852	1.3260318047871777	1.485300480668986	1.3108043913929246	1.0	11.055927048305417	-10.042334695027451	22.24017182710536	0.9999999961415418	1.3463594216629755	0.3044272593863304	0.1557839493409511	2891.443683478898	1518993.5049074604	0.15813809639483933	0.040831080946241084	9.071211752943658e-11	10.042334695027451	0.34635942552143373	
MKCTAREWLR	ddPTM_K562_Methotrexat_30min_R1	1	MKCTAREWLR	10	2	E5RJS4;Q9H336	E5RJS4	CRISPLD1	Cysteine-rich secretory protein LCCL domain-containing 1	0		67.726	0.03094	0.0	577.37	522.56	581.73	831.0	468.26	539.17	444.19	659.42	476.35	637.01	False	True	551.989506123318	608.9041579987189	459.6328228108192	758.1475202107333	529.8443976280859	643.3569717472625	543.8109146478313	636.227824837186	454.20459247220384	521.641316246894	1.0581782710287853	1.1672851421732922	0.8811281018110038	1.4533885576116834	1.015725520823794	1.2333320841533193	1.0424996979925654	1.219665323703113	0.8707220427632457	1.0	9.026914331552081	-9.765216056830084	24.999994508550635	0.9353609798570609	1.1335655759490246	0.2222243557890896	0.1485711707653284	144.0401697213764	953416.4144330769	0.11677546365330342	0.034657099280511056	1.717053958778297e-10	9.765216056830084	0.19820459609196373	
MKEVQT(ph)STPAEQDLEMASEGEQK	ddPTM_K562_Methotrexat_30min_R1	1	MKEVQTSTPAEQDLEMASEGEQK	23	1	A0A087X1R3;Q8N2N9-3;Q8N2N9-2;Q8N2N9	A0A087X1R3	ANKRD36B	Ankyrin repeat domain-containing protein 36B	1	MKEVQT(0.807)S(0.096)T(0.096)PAEQDLEMASEGEQK	53.254	0.023698	53959000.0	0.0	0.0	143.99	132.53	139.99	196.11	131.43	0.0	129.7	0.0	True	False	0.0	0.0	113.7684667397759	120.9113006660992	158.4011387347963	234.00548199891622	160.90652313686593	0.0	123.67027530942552	0.0											0.0														
MKSS(ph)SSVTTSETQPCTPSSSDYSDLQR	ddPTM_K562_Methotrexat_30min_R1	2	MKSSSSVTTSETQPCTPSSSDYSDLQR	27	1	P50552;K7EM16	P50552	VASP	Vasodilator-stimulated phosphoprotein	1	MKS(0.096)S(0.247)S(0.247)S(0.096)VT(0.096)T(0.096)S(0.096)ET(0.026)QPCTPSSSDYSDLQR;MKS(0.11)S(0.473)S(0.157)S(0.224)VT(0.025)T(0.008)S(0.003)ETQPCTPSSSDYSDLQR	106.39	2.536e-11	94588000.0	1896.4	1681.3899999999999	1710.27	1785.19	1414.69	1208.85	1490.4099999999999	1731.9299999999998	1641.3600000000001	1700.19	True	False	1813.0365266852452	1959.211118756632	1351.3076992224228	1628.685164386279	1600.746531586034	1442.4431539156083	1824.6723818642345	1671.0170402327308	1565.053531857199	1392.2691158220553	1.3022170111234213	1.407207196146005	0.9705793828692041	1.1698062866421004	1.149739309300763	1.036037600434689	1.3105744867341038	1.2002112387920714	1.1241027428329649	1.0	10.44322238560181	-6.742262861449525	24.999782233256216	1.1339114806600574	1.3547122167879784	0.4716149997143283	0.09845870754361839	217.19310425399146	283143.0484251509	0.024806668458148287	0.06541099522215228	1.810244091082959e-07	6.742262861449525	0.22080073612792095	
MKSSSSVTTSET(ph)QPCTPSSSDYSDLQR	ddPTM_K562_Methotrexat_30min_R1	1	MKSSSSVTTSETQPCTPSSSDYSDLQR	27	1	P50552;K7EM16	P50552	VASP	Vasodilator-stimulated phosphoprotein	1	MKS(0.082)S(0.082)S(0.082)S(0.082)VT(0.082)T(0.118)S(0.118)ET(0.347)QPCT(0.007)PS(0.001)SS(0.001)DYSDLQR	46.57	0.028762	70935000.0	1438.6	1156.5	1387.5	1460.8	1281.7	1219.3	1204.8	999.23	1230.6	1446.5	True	False	1375.3608665310028	1347.5919678611428	1096.2827113093902	1332.7339320383144	1450.266015546742	1454.9124685190895	1475.0070689743295	964.0865145310445	1173.389674601227	1184.5248331284165	1.161107667872673	1.1376645977966153	0.9255042027392769	1.1251211412077085	1.2243441209387596	1.2282667512141214	1.245231022365929	0.813901479789851	0.9905994722814035	1.0	10.210092729129356	-9.259366142061666	24.999986155652227	0.9266878565113146	1.1454853590058194	0.5058585535008515	0.09711459764682867	161.20175972914058	1943867.8942037364	0.05237505558587927	0.02829114113144626	5.50343520863443e-10	9.259366142061666	0.2187975024945048	
MKT(ph)SVT(ph)TPSSSK	ddPTM_K562_Methotrexat_30min_R1	1	MKTSVTTPSSSK	12	1	A0A0B4J2F5	A0A0B4J2F5	DUSP10		2	MKT(0.363)S(0.587)VT(0.423)T(0.392)PS(0.233)S(0.001)S(0.001)K	64.65	0.030554	0.0	503.89	445.26	579.86	647.99	381.16	523.9	543.74	485.1	643.85	452.08	True	False	481.7395989408498	518.8316468740614	458.15531025575683	591.1817227693776	431.28922094546033	625.1362603601661	665.6875362583846	468.03875804270274	613.9175540321789	370.2039312552328	1.3012816944094525	1.4014752493710256	1.2375754863064568	1.5969082790798195	1.1650044327814362	1.6886267475349233	1.7981644171126698	1.2642727927165605	1.6583226222114875	1.0	8.532176405275797	-7.253167507924678	24.999999805461627	1.4762485953763071	1.32224725749484	0.059951203164267164	0.24061366085226565	1728.3685878889708	5223621.976998959	0.06338090267049089	0.10742782031784001	5.582548336196495e-08	7.253167507924678	-0.15400133788146708	
MLAAES(ph)INRLFQDT(ph)KGDS(ph)S(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	MLAAESINRLFQDTKGDSSR	20	2	Q13315;E9PIN0	Q13315	ATM	Serine-protein kinase ATM	4	MLAAES(1)INRLFQDT(1)KGDS(1)S(1)R	42.806000000000004	0.030991	28774000.0	0.0	0.0	58.56399999999999	0.0	0.0	0.0	0.0	0.0	0.0	137.83	True	False	0.0	0.0	46.27221672441304	0.0	0.0	0.0	0.0	0.0	0.0	112.8676513999928	0.0	0.0	0.4099688099332241	0.0	0.0	0.0	0.0	0.0	0.0	1.0	6.818488249384188	-12.903655960197659	2.5643322415016807	1.538804770411572	0.04823162098226059	0.8457977467652786	0.1222555170677543	36501330.22367594	20314823.340418454	118561315.91327623	0.03281095111407896	1.2483720591646984e-13	12.903655960197659	-1.4905731494293113	
MLAES(ph)DES(ph)GDEESVSQTDKTELQNTLR	ddPTM_K562_Methotrexat_30min_R1	1	MLAESDESGDEESVSQTDKTELQNTLR	27	1	P22059	P22059	OSBP	Oxysterol-binding protein 1	2	MLAES(0.928)DES(0.75)GDEES(0.316)VS(0.005)QT(0.001)DKTELQNTLR	57.693999999999996	0.0039707	70840000.0	1272.2	845.46	1233.9	1296.5	841.46	874.01	855.88	1061.3	979.77	1659.7	True	False	1216.2756112892678	985.1578946371652	974.9212522411945	1182.8378579461069	952.1267390512298	1042.900062831436	1047.832876986844	1023.9734774494341	934.220706552936	1359.1122471781757	0.8949044597416665	0.7248539601365345	0.7173221007060685	0.8703018167939739	0.7005504814102442	0.7673391693708391	0.7709686077528783	0.7534134723422841	0.6873756810687193	1.0	10.408448895852004	-12.516055614795663	6.197792133966138	1.0002366327862104	0.7637011428377191	0.5400971789634097	0.064979691295007	0.00020270539603474424	1.582788274941917e-05	0.06002568835792897	0.014543970005160584	3.04750470789252e-13	12.516055614795663	-0.23653548994849138	
MLAESDES(ph)GDEES(ph)VSQTDKTELQNTLR	ddPTM_K562_Methotrexat_30min_R1	1	MLAESDESGDEESVSQTDKTELQNTLR	27	1	P22059	P22059	OSBP	Oxysterol-binding protein 1	2	MLAES(0.234)DES(0.782)GDEES(0.954)VS(0.029)QT(0.001)DKTELQNTLR	74.408	0.00069119	19490000.0	2032.3	1557.9	2432.6	2303.6	1675.6	1593.6	1372.2	1847.7	2208.4	2448.9	True	False	1942.9625254073103	1815.3164952277332	1922.0305034459268	2101.64696456973	1895.970769798018	1901.5406461346836	1679.9507802511403	1782.7153437136712	2105.7319660241737	2005.3804796738189	0.9688747572347662	0.9052229806899287	0.9584368267903709	1.0480040999060531	0.945441919383998	0.9482193855023336	0.8377217177881323	0.8889661397340595	1.0500411205591655	1.0	10.969660269004384	-8.182404862735737	3.7688985973784077	0.931131932590374	0.9672504755604501	0.0074632603162434474	0.06351239601296396	0.7901410672534246	21.49677701816666	0.02275437717963226	0.022462132663505236	6.570450340792542e-09	8.182404862735737	0.036118542970076106	
MLAESDES(ph)GDEESVSQTDKTELQNTLR	ddPTM_K562_Methotrexat_30min_R1	1	MLAESDESGDEESVSQTDKTELQNTLR	27	1	P22059	P22059	OSBP	Oxysterol-binding protein 1	1	MLAES(0.071)DES(0.835)GDEES(0.049)VS(0.041)QT(0.004)DKTELQNTLR	51.857	0.027860000000000003	0.0	406.91	415.87	644.72	528.12	385.2	309.35	317.41	422.07	445.17	488.3	True	False	389.02272362027696	484.5854489186453	509.40208262010117	481.82053955919673	435.86055175829364	369.12750933845695	388.597272379766	407.2255588684468	424.4741438665917	399.86413827625665	0.9728872543991689	1.2118752409446047	1.273937905049558	1.2049606189648303	1.0900216099328415	0.9231323192164722	0.9718232649092762	1.0184098044498913	1.0615459183122158	1.0	8.643366088949856	-8.001898718904584	4.668100024258474	0.9949143057216039	1.175289804943781	0.5036291123975258	0.07987257068539036	0.16097182135186058	9.358150900759172	0.027160811547698335	0.029293502578047272	9.956375812672666e-09	8.001898718904584	0.1803754992221771	
MLGEDS(ph)DEEEEMDTSER	ddPTM_K562_Methotrexat_30min_R1	3	MLGEDSDEEEEMDTSER	17	0	A0A087X0M4;Q9BWU0;H7C256;A0A087WWF4	A0A087X0M4	SLC4A1AP	Kanadaptin	1	MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER	121.45	0.00013919	232100000.0	8853.9	6917.699999999999	10723.0	9078.099999999999	7154.0	7292.299999999999	7787.5	8008.4	8030.099999999999	9677.1	True	False	8464.693157360518	8060.7323442049465	8472.388838465295	8282.237067659516	8094.87639480486	8701.433768704797	9534.045110920968	7726.740032795669	7656.782403717945	7924.483416983753	1.0681697104973413	1.0171934143907961	1.0691408376610734	1.0451453592431055	1.0215020927996292	1.0980442901875325	1.2031125070547315	0.9750465268481375	0.9662184903192464	1.0	12.952101176248934														
MLGEDSDEEEEMDT(ph)SER	ddPTM_K562_Methotrexat_30min_R1	1	MLGEDSDEEEEMDTSER	17	0	A0A087X0M4;Q9BWU0;H7C256;A0A087WWF4	A0A087X0M4	SLC4A1AP	Kanadaptin	1	MLGEDS(0.001)DEEEEMDT(0.682)S(0.317)ER	80.706	0.011996	0.0	712.51	510.28	713.22	803.41	635.08	590.56	518.94	654.81	649.37	689.53	True	False	681.1889135353845	594.5950967230297	563.524868727988	732.976292674495	718.6041516372202	704.6773619360564	635.3255049581163	631.7799611501586	619.1809304370217	564.6494353176886	1.2063926233311955	1.0530340766009847	0.9980083809185643	1.2981086083298758	1.2726553976502466	1.247990908800934	1.1251680515728546	1.118888856755343	1.0965758428300776	1.0	9.141211632706025	-9.933203946328335	1.23810490099615	1.0037292501123953	1.1716422802958135	0.2645744058174959	0.08933287146107141	0.7171935576078694	2.4640688754906206	0.09474071990618442	0.02971965490755306	1.1662618074964094e-10	9.933203946328335	0.1679130301834182	
MLLAAGSAAS(ph)GNNHRDDDTASVTS(ph)LNSSATGR	ddPTM_K562_Methotrexat_30min_R1	1	MLLAAGSAASGNNHRDDDTASVTSLNSSATGR	32	1	P21675-10;P21675-11;P21675-8;P21675-6;P21675-7;P21675-3;P21675-5;P21675-9;P21675;P21675-2;P21675-12;P21675-4	P21675-10	TAF1	Transcription initiation factor TFIID subunit 1	2	MLLAAGS(0.05)AAS(0.632)GNNHRDDDT(0.171)AS(0.189)VT(0.117)S(0.726)LNS(0.065)S(0.027)AT(0.022)GR	49.191	0.0037506999999999996	9746600.0	555.76	370.99	686.93	635.49	476.65	457.7	533.61	593.23	557.04	835.89	True	False	531.3294558482341	432.2897917482104	542.7527804538804	579.7775783618756	539.3378296874108	546.1440472739995	653.2856258925896	572.3657646540354	531.1433319842902	684.5022210602917	0.7762275117605996	0.6315389175488648	0.7929160253317485	0.8470061316438127	0.7879270703489877	0.7978703800668815	0.9543951879084516	0.8361780970811792	0.775955600496885	1.0	9.418911412495985	-3.5221151893695	0.06152599890645522	1.22991784143829	5.5650024877534584e-11	0.509435132753104	0.06757298455998324	246.62637443455108	1.2468696469647713	5.312212077088617	27.61613697838772	0.0003005279096742492	3.5221151893695	-1.2299178413826402	
MLNS(ph)SFEDDPFFSESILAHR	ddPTM_K562_Methotrexat_30min_R1	1	MLNSSFEDDPFFSESILAHR	20	0	A0A494C175;A0A0S2Z4A4;P58340	A0A494C175	MLF1	Myeloid leukemia factor 1	1	MLNS(0.746)S(0.254)FEDDPFFSESILAHR	95.223	0.0050891999999999995	5299700.0	584.28	400.47	504.62	616.72	555.17	433.53	432.53	573.09	623.16	786.12	True	False	558.595750797118	466.6408606738881	398.7071580403201	562.6531151195708	628.1845859804046	517.3035368466172	529.5358628348827	552.9340998694956	594.189427616204	643.7460503414524	0.8677268784807776	0.7248834543161468	0.619354725095152	0.8740296190106818	0.9758267031653339	0.8035832399627646	0.8225850279842635	0.8589320269634451	0.923018366172557	1.0	9.330347865431294	-9.257987534922016	0.17148657706849987	1.0703438147580528	0.6732418719113771	0.3567659588024623	0.08649265959566017	4.544437665905761	0.773622870149045	0.6884411857429816	0.781481419939576	5.520932851811321e-10	9.257987534922016	-0.39710194284667577	
MLNSS(ph)FEDDPFFSESILAHR	ddPTM_K562_Methotrexat_30min_R1	1	MLNSSFEDDPFFSESILAHR	20	0	A0A494C175;A0A0S2Z4A4;P58340	A0A494C175	MLF1	Myeloid leukemia factor 1	1	MLNS(0.185)S(0.815)FEDDPFFSESILAHR	127.53	2.0423e-05	8320000.0	555.69	489.69	687.8	664.93	595.55	688.75	596.99	969.43	861.12	1001.1	True	False	531.2625329644189	570.6029491931887	543.4401793431343	606.6366192704241	673.8752637581819	821.8411897748894	730.8802042720658	935.3345974218453	821.0867191553784	819.7910891426598	0.6480462400732058	0.6960345833838315	0.6629008128296026	0.739989281787445	0.8220085247119762	1.0025007598391604	0.891544460475196	1.1409426252730086	1.0015804392483378	1.0	9.679112498215868	-8.058313878737208	1.0733883464301415	1.036165415057111	0.6603040873520808	0.8772818864916957	0.057174358723804435	0.15324385411398245	0.3750076701216125	0.02726865075889313	0.030067397786949036	8.743516244804293e-09	8.058313878737208	-0.3758613277050301	
MLPHAPGVQMQAIPEDAIPEES(ph)GDEDEDDPDKR	ddPTM_K562_Methotrexat_30min_R1	12	MLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKR	33	1	Q13547	Q13547	HDAC1	Histone deacetylase 1	1	MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR	116.1	1.7384e-18	1927151000.0	32951.2	23590.5	44229.799999999996	34305.9	24975.4	23081.1	21692.899999999998	29992.999999999996	33467.0	41509.0	True	False	31502.70470265281	27488.429155061185	34946.56941597985	31298.355010345844	28260.10286704071	27541.195913340394	26558.085031999675	28938.12918980575	31911.12647479218	33991.31786956615	0.926786799603863	0.8086897148425283	1.0281028099610394	0.9207749793769713	0.8313917976196846	0.8102420747269461	0.7813196632713745	0.8513388419021927	0.9388022728993262	1.0	15.052878676910941	-5.879235544022331	18.740945358170194	0.8785480064433542	9.772080758814505	0.016369058627148214	0.08030828010185218	1420.6251197227718	222429.81798711332	0.020014227785313973	4840.38123693573	1.3205792103796197e-06	5.879235544022331	8.89353275237115	
MLPHAPGVQMQAIPEDAVHEDS(ph)GDEDGEDPDKR	ddPTM_K562_Methotrexat_30min_R1	11	MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR	33	1	Q92769-3;Q92769	Q92769-3	HDAC2	Histone deacetylase 2	1	MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR	78.45	4.6598e-07	1858801000.0	32433.000000000004	22602.399999999998	42895.799999999996	35642.3	24874.899999999998	22481.6	21355.399999999998	29302.800000000003	29763.8	40883.0	True	False	31007.284154177658	26337.06242488946	33892.55778579122	32517.594897240702	28146.38535548386	26825.851022930183	26144.892065715798	28272.203915014838	28380.087434500234	33478.69253563017	0.9261796625175167	0.7866813316218926	1.012362049375751	0.9712922588787896	0.8407253456964806	0.8012813222732755	0.7809412520483208	0.8444835139522173	0.8477059671400347	1.0	15.030955566063904	-7.793346869863196	20.81592415383125	0.83860547900096	0.9206133423502272	0.1563938172183602	0.07735842458958238	51.744458620660374	33756.023742689555	0.02402971910594154	0.027254827568149082	1.6093597303282316e-08	7.793346869863196	0.08200786334926713	
MLS(ph)ARPS(ph)RLAPS(ph)S(ph)PPGK	ddPTM_K562_Methotrexat_30min_R1	1	MLSARPSRLAPSSPPGK	17	2	D6RA96	D6RA96	RTEL1-TNFRSF6B	Regulator of telomere elongation helicase 1	4	MLS(1)ARPS(1)RLAPS(1)S(1)PPGK	66.82600000000001	0.021509999999999998	0.0	170.17	211.34	213.66	228.47	115.68	131.17	187.94	182.42	175.39	267.29	True	False	162.68953055580474	246.2603428342186	168.815685836659	208.44038982255856	130.89394763083965	156.51674608025004	230.09032913598557	176.0041852033597	167.2361571821137	218.88119090694394	0.7432778023625212	1.1250868190812922	0.7712662981097813	0.9522992311896538	0.5980136853627064	0.7150762723453575	1.0512110619582984	0.8041083131633127	0.764049923564301	1.0	7.774004174667406														
MLS(ph)SSDAITQEFMDLR	ddPTM_K562_Methotrexat_30min_R1	3	MLSSSDAITQEFMDLR	16	0	Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;H3BQK9;H3BPE1;A0A590UJG2;H0Y390;A0A5F9ZGX0;E9PLY5;E9PNZ4;A0A669KBB0	Q9UPN3	MACF1	Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5	1	MLS(0.906)S(0.087)S(0.007)DAITQEFMDLR;MLS(0.958)S(0.039)S(0.003)DAITQEFMDLR;MLS(0.937)S(0.061)S(0.002)DAITQEFMDLR	98.421	0.002271	92755000.0	8671.8	7839.0	9139.1	9403.2	8257.7	7666.700000000001	7744.5	8961.0	8901.6	10565.9	True	False	8290.598055320135	9134.261509782527	7220.927803191099	8578.836055409822	9343.732290380218	9148.181269905112	9481.40126632777	8645.836550856853	8487.76655893895	8652.313124335662	0.9581944083833305	1.0557016809864783	0.834566167384925	0.9915078120879401	1.0799114821792402	1.057310471598024	1.095822715853891	0.9992514633502348	0.980982361244659	1.0	13.078870161560676	-7.526328026169905	24.69114168093881	1.039256352532561	0.9522635408230934	0.29125687202134887	0.0602520957477438	109.05443372791184	780640.9098496026	0.018024496875950907	0.02339128871841549	2.97626758103243e-08	7.526328026169905	-0.08699281170946771	
MLS(ph)T(ph)PGRSKIK	ddPTM_K562_Methotrexat_30min_R1	1	MLSTPGRSKIK	11	2	A0JNU9;H0Y8P0;Q86TI0-2;Q86TI0	A0JNU9	TBC1D1	TBC1 domain family member 1	2	MLS(0.985)T(0.985)PGRS(0.029)KIK	82.45200000000001	0.020703	4169500.0	2781.6	1751.5	3040.8	2120.9	1683.4	1592.8	1362.2	2009.2	2387.2	2814.9	True	False	2659.324194593798	2040.9056045903938	2402.5776349906987	1934.9639899096794	1904.796606515866	1900.586057456906	1667.7080256945821	1938.535297174599	2276.219593050583	2305.094333061306	1.1536726095986074	0.8853891900727319	1.0422903742077787	0.8394294160360584	0.8263421497315383	0.8245155220753208	0.7234879726070751	0.8409787267144533	0.9874735104778227	1.0	11.170610076989137	-3.000001027912783	0.72321345957965	0.852879378717877	43.16886864025917	0.42177083524283154	0.09324497681042557	304.7043987291537	1.4679900584111547	0.03581791945624481	20927.1741218489	0.0009999976331461502	3.000001027912783	42.31598926154129	
MLSDSGLGMIAPYYEDSDLKDLSHS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	MLSDSGLGMIAPYYEDSDLKDLSHSR	26	1	A0A087WV00;E7EM72;E7EWQ4;O75912	A0A087WV00	DGKI	Diacylglycerol kinase;Diacylglycerol kinase iota	1	MLSDSGLGMIAPYYEDSDLKDLS(0.022)HS(0.977)R	45.07	0.030438	0.0	0.0	0.0	0.0	152.97	0.0	0.0	108.9	0.0	0.0	0.0	True	False	0.0	0.0	0.0	139.5593576012465	0.0	0.0	133.32359712093668	0.0	0.0	0.0											0.0														
MLSST(ph)PPTPIACAPSAVNQAAPHQQNR	ddPTM_K562_Methotrexat_30min_R1	1	MLSSTPPTPIACAPSAVNQAAPHQQNR	27	0	E7EVK1;A0A088AWL3;O75376-2;O75376	E7EVK1	NCOR1	Nuclear receptor corepressor 1	1	MLS(0.072)S(0.292)T(0.604)PPT(0.032)PIACAPSAVNQAAPHQQNR	125.08	6.235700000000001e-14	11355000.0	2642.6	2331.2	3653.5	2642.9	2530.9	2583.7	2599.5	3258.7	2913.2	3127.7	True	False	2526.4344681598955	2716.3911763751803	2886.680278031607	2411.2010603669637	2863.7577114357873	3082.9634584702444	3182.5040469777305	3144.089673951258	2777.7659678598175	2561.243221967332	0.9864094305808648	1.0605752523138652	1.1270621443809237	0.9414182298996506	1.118112363118755	1.2036980447730266	1.2425622134133745	1.2275638826429895	1.0845381430531111	1.0	11.322628545978821	-7.992267538656815	24.598481054393666	1.1703901941974937	1.0370976696837566	0.3245763805903019	0.08146109087491847	161.25113519952026	512965.9935514344	0.024758755853206943	0.028017605872117064	1.0179640979034062e-08	7.992267538656815	-0.13329252451373708	
MLY(ph)DAQLSEEQGR	ddPTM_K562_Methotrexat_30min_R1	1	MLYDAQLSEEQGR	13	0	H7BYL6;A0A0A0MRF6;Q99996-5;Q99996-3;Q99996;Q99996-1;Q99996-6	H7BYL6	AKAP9	A-kinase anchor protein 9	1	MLY(0.722)DAQLS(0.278)EEQGR	66.498	0.028551	29697000.0	306.0	370.73	233.07	285.54	284.33	286.26	225.51	356.32	251.55	269.54	True	False	292.54860639405433	431.9868311674544	184.15179209000323	260.50715152944986	321.7243787160841	341.5756936260761	276.0863580049811	343.7880236359016	239.8554954054433	220.72369410399807	1.3254064434795778	1.95713846182692	0.8343091249788375	1.180240991285272	1.4575887741553368	1.547526172994986	1.2508233840762826	1.5575492474039487	1.0866776055878755	1.0	7.7860976971970715	-9.903101666274608	6.0626444606615175	1.0030783336817524	1.3845166461371468	0.20406371549169156	0.2750023815160551	0.31536633286058674	15.088431448304876	0.26503864274693173	0.06882861201082802	1.2499663847743006e-10	9.903101666274608	0.3814383124553944	
MMLRGNLKQVRIEK	ddPTM_K562_Methotrexat_30min_R1	1	MMLRGNLKQVRIEK	14	3	X6RDA4;Q8WXF1-2;Q8WXF1	X6RDA4	PSPC1	Paraspeckle component 1	0		47.18899999999999	0.032924	16218000.0	4768.6	3104.8	6688.5	4881.4	2892.4	3052.6	2373.3	3661.6	3499.8	5415.8	False	True	4558.9780537604165	3617.815427423496	5284.675253760614	4453.4552408624195	3272.8012977821627	3642.4717472331427	2905.5729389083476	3532.8194525853646	3337.0950618961247	4434.946139825011	1.0279669493213506	0.8157518295286994	1.1915985193834013	1.00417346692696	0.7379573944298897	0.8213113829104727	0.6551540531274619	0.7965867772014833	0.7524544733316187	1.0	12.114700868494133	-7.754483222978398	24.675827935956974	0.7781722170402594	1.0089874024962597	0.4411903691252578	0.11827508938689696	120.9065996847121	428893.41636358923	0.03411388569486209	0.04305122919521188	1.760016652846472e-08	7.754483222978398	0.23081518545600033	
MMLT(ph)QAPS(ph)S(ph)VVRS(ph)RNSR	ddPTM_K562_Methotrexat_30min_R1	1	MMLTQAPSSVVRSRNSR	17	2	C9JLP9;C9JIV0;Q6ZU64-3;Q6ZU64-4	C9JLP9	CCDC108		4	MMLT(1)QAPS(0.787)S(0.787)VVRS(0.846)RNS(0.58)R	46.808	0.031091000000000004	5301800.0	598.98	731.59	1201.7	922.22	598.81	703.41	500.33	497.17	411.46	633.24	True	False	572.6495563984008	852.4728125962235	949.4795922021582	841.3704044389193	677.564010899231	839.3340272951801	612.5417387283585	479.68424930136143	392.33131440876065	518.5540997789412	1.1043197935230296	1.6439419010661207	1.8310135675466066	1.6225315831030824	1.306640929438366	1.6186045538025577	1.181249437598669	0.9250418606387454	0.7565870457412464	1.0	9.018350700339305	-9.018056425095546	2.4283319172149382	0.8729378940421921	1.5380141705058636	0.6694357216934017	0.1978457187436413	0.17894505390414242	2.091860420364356	0.11197606578114383	0.06072760836239549	9.592759908445714e-10	9.018056425095546	0.6650762764636715	
MMT(ph)S(ph)WAIVCS(ph)VWYLPPMTR	ddPTM_K562_Methotrexat_30min_R1	1	MMTSWAIVCSVWYLPPMTR	19	0	Q86UL3	Q86UL3	AGPAT6	Glycerol-3-phosphate acyltransferase 4	3	MMT(0.777)S(0.788)WAIVCS(0.873)VWY(0.314)LPPMT(0.249)R	41.553999999999995	0.032477	12410000.0	0.0	124.69	169.83	64.369	56.88	0.0	0.0	147.09	0.0	58.799	True	False	0.0	145.29290313238724	134.18500386426936	58.725869709319696	64.36071698860786	0.0	0.0	141.9167613285944	0.0	48.149931326040594	0.0	3.0175100800986914	2.7868161006430974	1.2196459702437705	1.336673079610398	0.0	0.0	2.947392808675566	0.0	1.0	5.589461835310171	-7.462888815175108	5.375463265156299	0.9184828379101746	2.048515439704677	0.14755779450750606	1.1188165918516872	0.3880928985987653	23.1396157770144	0.31984057233656177	0.4712988760323201	3.4443809994272535e-08	7.462888815175108	1.1300326017945026	
MNEEIS(ph)S(ph)DS(ph)ESESLAPR	ddPTM_K562_Methotrexat_30min_R1	2	MNEEISSDSESESLAPR	17	0	O43818	O43818	RRP9	U3 small nucleolar RNA-interacting protein 2	3	MNEEIS(0.999)S(0.998)DS(0.998)ES(0.004)ESLAPR;MNEEIS(0.891)S(0.992)DS(0.997)ES(0.117)ES(0.003)LAPR	100.02	0.0010067	23924000.0	4187.1	3563.6000000000004	5198.1	4373.6	3065.1000000000004	3756.0	3841.4	4103.8	3913.6	4831.0	True	False	4003.04009749198	4152.424329156909	4107.089846239525	3990.1732784520614	3468.2143748555213	4481.79384216985	4702.931735356894	3959.467027944015	3731.657590215633	3956.05908665287	1.0118757100968527	1.0496365797888472	1.0381770737692493	1.0086232766123961	0.8766841694950257	1.1328935549245782	1.1887920863527688	1.0008614485316063	0.943276505349899	1.0	11.949848258631832	-8.320016003022602	24.999953391640965	1.0616951783933315	1.0028551214014807	0.10565760731440821	0.07888144319090319	660.0240928067115	281689.5589904919	0.029913762245598264	0.026381459429507762	4.786124559321573e-09	8.320016003022602	-0.0588400569918508	
MNGVMFPGNS(ph)PSYTER	ddPTM_K562_Methotrexat_30min_R1	1	MNGVMFPGNSPSYTER	16	0	Q9NY27-2;Q9NY27-3;Q9NY27	Q9NY27-2	PPP4R2	Serine/threonine-protein phosphatase 4 regulatory subunit 2	1	MNGVMFPGNS(0.949)PS(0.05)YT(0.001)ER	114.06	0.00053576	35651000.0	2924.3	2602.5	2844.3	2791.9	2402.4	2730.7	2326.9	2484.7	2433.7	2872.2	True	False	2795.751273457951	3032.5188900636617	2247.320299659314	2547.1384617043864	2718.3577090968965	3258.369128012036	2848.76655776591	2397.311692658634	2320.557818200068	2352.0167478129515	1.1886612950599142	1.2893270819110803	0.9554865209820506	1.0829593216429563	1.1557561023426348	1.3853511591879037	1.211201646593234	1.0192579176520749	0.9866246999975082	1.0	11.199682617753314	-9.309800370327078	6.171324219411912	0.9996768766130232	1.1797718538887982	0.36809015746890805	0.10771525102233999	0.27709803502586444	26.044075562958035	0.06540421047414273	0.031261574149312216	4.900040049619336e-10	9.309800370327078	0.18009497727577506	
MNHSMS(ph)SGS(ph)GSLRT(ph)NQK	ddPTM_K562_Methotrexat_30min_R1	1	MNHSMSSGSGSLRTNQK	17	1	E9PQT9;E9PRL2;A8MVA8;F8W750;Q15700-5;B5MCC5	E9PQT9	DLG2		3	MNHS(0.019)MS(0.821)S(0.466)GS(0.604)GS(0.228)LRT(0.862)NQK	55.093999999999994	0.028238	34559000.0	1686.2	1110.3	2678.8	1768.4	1259.5	1619.9	1372.6	1330.0	1180.0	1924.1	True	False	1612.0766669988707	1293.7582031268712	2116.5564879679964	1613.3671176181235	1425.1463264267163	1932.9227489166506	1680.4404904334028	1283.223146148824	1125.1420575568404	1575.626845089792	1.0231335369936538	0.8211069817442356	1.343310755693159	1.0239525447576268	0.9044948243094322	1.2267642906315785	1.0665218707527402	0.8144207177910171	0.7140917032882369	1.0	10.621710187170946	-9.261174224100989	24.487511066315918	0.8231921408723485	1.0595186138394832	0.29082628760760765	0.15338197673122236	21.318278934287928	1969088.7466066023	0.0770235374778642	0.040864967927630086	5.4805705905616e-10	9.261174224100989	0.23632647296713472	
MNILGS(ph)QS(ph)PLHPSTLSTVIHR	ddPTM_K562_Methotrexat_30min_R1	1	MNILGSQSPLHPSTLSTVIHR	21	0	A0A2R8YCL1;Q13322-3;Q13322-2;Q13322-4;Q13322	A0A2R8YCL1	GRB10	Growth factor receptor-bound protein 10	2	MNILGS(0.988)QS(0.985)PLHPS(0.004)T(0.009)LS(0.01)T(0.004)VIHR	53.751000000000005	0.021128	6043500.0	966.77	871.25	1210.7	1469.7	1103.7	713.38	1022.4	1204.3	1282.9	1818.4	True	False	924.2719483777126	1015.209253782118	956.5906151944356	1340.853682856456	1248.8558955753595	851.230588691994	1251.6992258626774	1161.9440863962618	1223.2582590166699	1489.070139343734	0.6207041051706669	0.6817739654826086	0.6424080303000543	0.9004637507857084	0.8386817132239035	0.5716524468532759	0.8405911802209188	0.7803152153117221	0.8214913634328782	1.0	10.54019599513024	-15.999999976614172	0.06198428749606134	1.9186451163430167	0.36909766476131367	0.4768562616444616	0.09376905557512358	367.5835229524428	1.6563410832369452	50.652370833308254	7.951825371074646	1.0000000538478613e-16	15.999999976614172	-1.5495474515817032	
MNILGSQS(ph)PLHPSTLSTVIHR	ddPTM_K562_Methotrexat_30min_R1	1	MNILGSQSPLHPSTLSTVIHR	21	0	A0A2R8YCL1;Q13322-3;Q13322-2;Q13322-4;Q13322	A0A2R8YCL1	GRB10	Growth factor receptor-bound protein 10	1	MNILGS(0.072)QS(0.928)PLHPSTLSTVIHR	88.471	0.0095979	66446000.0	594.79	443.86	375.59	588.45	357.35	429.79	552.85	856.74	705.46	840.99	True	False	568.6437437814368	517.2003206699925	296.75879174104045	536.861502127564	404.347788605468	512.8408347780036	676.8406856594104	826.6079685951452	672.6633185797017	688.6785616402809	0.8257026941960447	0.7510039508680727	0.4309104541227859	0.779553092009831	0.5871357279401881	0.7446737321930414	0.9828107383614856	1.200281255490728	0.9767449664435112	1.0	9.427686956833993	-8.772291899181651	3.1523048512413308	1.0703013097809095	0.6710630667751754	0.687983238279938	0.11785848825036503	0.13556752755829427	2.783439701460127	0.051664681400617064	0.03525218854344523	1.6893051296546937e-09	8.772291899181651	-0.3992382430057342	
MNILT(ph)NEMRR	ddPTM_K562_Methotrexat_30min_R1	1	MNILTNEMRR	10	1	K7ELN3;Q9UFH2	K7ELN3	DNAH17	Dynein heavy chain 17, axonemal	1	MNILT(1)NEMRR	61.765	0.027045999999999997	26913000.0	1692.2	1685.1	3120.1	2117.0	1432.2	1456.3	1585.8	1440.6	1565.7	1686.4	True	False	1617.8129141830686	1963.5341331974143	2465.233648689319	1931.405896854538	1620.559403500074	1737.709364310957	1941.456017579258	1389.9332814601478	1492.910948743003	1380.9766184498865	1.1714991351548192	1.4218445895205922	1.7851378624038439	1.3985797232559196	1.1734879373403972	1.2583191786849328	1.4058572691538374	1.0064857455880136	1.0810544717395434	1.0	10.431473177949607	-9.002138675230935	0.6911291953256942	0.9847787810842067	1.4435555218774594	0.4405366379869021	0.1706635443191998	0.7024057931023281	0.6485155805682877	0.16557749293114382	0.09365128481758464	9.950876236754673e-10	9.002138675230935	0.4587767407932527	
MNTPT(ph)LPS(ph)ITYS(ph)IRPEALHS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	MNTPTLPSITYSIRPEALHSPR	22	1	Q96T58	Q96T58	SPEN	Msx2-interacting protein	4	MNT(0.468)PT(0.55)LPS(0.981)IT(0.137)Y(0.127)S(0.74)IRPEALHS(0.998)PR	56.533	0.014622	31050000.0	433.89	456.89	359.07	236.28	363.82	303.43	339.3	223.6	331.22	356.65	True	False	414.81671512521643	532.3833066978622	283.706113981883	215.56569924836586	411.66870701116926	362.063553122896	415.3966621040752	215.73586126231353	315.82165449489554	292.05722899083975	1.4203268193653478	1.8228732380206214	0.9714058952150824	0.7380940372310626	1.4095480821811162	1.2397007065154753	1.4223125499732243	0.7386766696642184	1.0813690713500577	1.0	8.190107284535811	-6.767224132407194	24.999273668983893	1.0839875775458	1.6216000686242538	0.4495179994851305	0.241731160317673	116.40495882557732	503061.52803770726	0.06535106476562802	0.14214323825169978	1.7091330313354134e-07	6.767224132407194	0.5376124910784537	
MNVEEAGGEALGR	ddPTM_K562_Methotrexat_30min_R1	4	MNVEEAGGEALGR	13	0	P02100	P02100	HBE1	Hemoglobin subunit epsilon	0	;;;	122.18	0.0023956999999999997	129556000.0	2700.46	2057.44	3146.5	2693.3999999999996	2423.4700000000003	2428.0299999999997	2362.3199999999997	2637.1600000000003	2983.05	2881.82	False	True	2581.7510118395053	2397.3969894995485	2486.0926494666637	2457.273803773271	2742.1987834103643	2897.2124341330305	2892.1303944052434	2544.4095880434816	2844.3686566058736	2359.894472593246	1.0940112118668022	1.0158916075874747	1.0534761949481328	1.0412642735982243	1.162000595898261	1.2276872833848944	1.2255337804266868	1.0781878671241918	1.2052948509516392	1.0	11.204506632693993	-7.76359025341796	24.847842744207878	1.1613761186361862	1.0488069634096027	0.32571378028363585	0.06827202838205182	53.695034008812954	620311.204829966	0.020072036456247083	0.023889980036305256	1.723493883901412e-08	7.76359025341796	-0.1125691552265835	
MNY(ph)LDRYLSCVPTRK	ddPTM_K562_Methotrexat_30min_R1	1	MNYLDRYLSCVPTRK	15	2	P30281-2;D6RDL3;D6RIX2;D6RI00	P30281-2	CCND3	G1/S-specific cyclin-D3	1	MNY(0.985)LDRY(0.012)LS(0.003)CVPTRK	43.593999999999994	0.032138	2635000.0	0.0	166.69	148.22	186.63	0.0	0.0	163.53	174.33	132.97	223.14	True	False	0.0	194.23268925445205	117.11064754614618	170.26843766176785	0.0	0.0	200.20576526342296	168.1987150888154	126.78825372316359	182.72718372919095	0.0	1.0629654837909215	0.640904353452461	0.9318177743827789	0.0	0.0	1.095653975382973	0.9204909289145103	0.6938664031021727	1.0	7.513547464758174	-8.790852243598753	24.999813976314172	0.9208771310313233	0.4792154734913108	0.2941986121975041	0.36729293639625404	325.4770178924144	276639.90374120645	0.16190840336208914	0.10917686480256662	1.6186306372206694e-09	8.790852243598753	-0.4416616575400125	
MNYMQNHQAGAPAPSLS(ph)R	ddPTM_K562_Methotrexat_30min_R1	3	MNYMQNHQAGAPAPSLSR	18	0	H0YJG4;Q9HCK8-2;Q9HCK8;A0A2R8Y840	H0YJG4	CHD8	Chromodomain-helicase-DNA-binding protein 8	1	MNYMQNHQAGAPAPS(0.092)LS(0.908)R;MNYMQNHQAGAPAPS(0.094)LS(0.906)R;MNYMQNHQAGAPAPS(0.255)LS(0.745)R	95.361	0.00086376	46560500.0	4339.51	3781.06	3833.4	4408.85	3361.33	3365.76	3928.95	4304.360000000001	4748.0	4867.799999999999	True	False	4148.75033638256	4405.815897968914	3028.8217265105686	4022.3329656812152	3803.403812153957	4016.14548514952	4810.117051499577	4152.973219065526	4527.266516338876	3986.1942500535806	1.0407797704105348	1.1052687404558104	0.7598279302294053	1.0090659695340107	0.9541441218281907	1.0075137419847358	1.2066940920992302	1.0418391474549198	1.135736552797953	1.0	11.960796300097625	-8.539989280078307	24.575940342564476	1.1006326542712397	0.9721539958705755	0.2601527887546593	0.09760284806688484	267.98435563408725	384903.09608832764	0.037092478321231796	0.028738974543159747	2.884102692088771e-09	8.539989280078307	-0.1284786584006642	
MPCES(ph)SPPESADTPTSTR	ddPTM_K562_Methotrexat_30min_R1	6	MPCESSPPESADTPTSTR	18	0	P46013;P46013-2	P46013	MKI67	Antigen KI-67	1	MPCES(0.98)S(0.02)PPESADTPTSTR;MPCES(0.995)S(0.005)PPESADTPTSTR;MPCES(0.865)S(0.128)PPES(0.006)ADTPTSTR;MPCES(0.98)S(0.016)PPES(0.005)ADTPTSTR;MPCES(0.493)S(0.493)PPES(0.014)ADTPTSTR;MPCES(0.49)S(0.49)PPES(0.02)ADTPTSTR	172.42	2.3004e-12	956494000.0	10679.7	9078.78	12853.1	11842.400000000001	10970.7	9515.0	9680.78	11039.099999999999	11640.9	12131.7	True	False	10210.23317551171	10578.894082125713	10155.40995800412	10804.19517851214	12413.539343651908	11353.639086327506	11851.941345605343	10650.848595978552	11099.71709984188	9934.53157142344	1.0277518473927167	1.0648608850925365	1.022233397215832	1.0875394678487185	1.249534439989028	1.1428459414217487	1.193004547863868	1.072103754405048	1.1172864085278145	1.0	13.278236228431279	-7.525666792190866	24.979644174414986	1.1395160658352081	1.0432643316504502	0.28126847365190666	0.06374073026470727	98.09141805506113	878845.668845023	0.01842231580733615	0.023925579287587363	2.980802541276674e-08	7.525666792190866	-0.09625173418475796	
MPCESS(ph)PPESADTPT(ph)STR	ddPTM_K562_Methotrexat_30min_R1	1	MPCESSPPESADTPTSTR	18	0	P46013;P46013-2	P46013	MKI67	Antigen KI-67	2	MPCES(0.445)S(0.549)PPES(0.085)ADT(0.281)PT(0.489)S(0.121)T(0.031)R	77.969	0.007737899999999999	0.0	536.17	451.32	572.04	760.24	447.26	461.82	382.68	500.23	629.99	590.87	True	False	512.6006087918308	525.892958871674	451.97662138913404	693.5909395487455	506.08252954157416	551.060178964558	468.5057313704318	482.6366273669371	600.7019024069778	483.8577173526357	1.0594036023574411	1.086875211475449	0.9341105973509425	1.433460529148192	1.045932536346715	1.1388888906838395	0.9682716934511238	0.9974763449214376	1.241484595293095	1.0	8.91843906238286	-8.70121610116347	24.99961897193647	1.0515939839759028	1.1180179380966973	0.04957223347563422	0.1385478809274069	257.54078827990696	106907.8304512719	0.05285299902488954	0.0409397328856119	1.9896830436191844e-09	8.70121610116347	0.06642395412079449	
MPCESS(ph)PPESADTPTSTR	ddPTM_K562_Methotrexat_30min_R1	3	MPCESSPPESADTPTSTR	18	0	P46013;P46013-2	P46013	MKI67	Antigen KI-67	1	MPCES(0.049)S(0.939)PPES(0.011)ADT(0.001)PTSTR;MPCES(0.249)S(0.708)PPES(0.042)ADTPTSTR;MPCES(0.05)S(0.9)PPES(0.05)ADTPTSTR	173.19	1.4965e-11	136451000.0	3883.6400000000003	3457.17	4692.8	4495.52	3954.4	3396.87	3992.85	3773.7799999999997	4209.43	4310.12	True	False	3712.919835739235	4028.4085806575936	3707.845410906456	4101.4047413450735	4474.47291244288	4053.267052356628	4888.3482531159925	3641.054018401135	4013.7345180860084	3529.515502083271	1.0519630338916803	1.141348884366666	1.0505253224466438	1.1620305220147777	1.2677300637444022	1.148391911004277	1.3849912970294875	1.0316016507795558	1.1371913555038733	1.0	11.785254442460412	-7.375799635764569	6.167543153254788	1.177111777141078	1.087784730437965	0.09649784472458978	0.10582443719111355	0.4961388749562175	23.512228562892638	0.029497447071816955	0.043998211641738255	4.209207777958202e-08	7.375799635764569	-0.08932704670311287	
MPCESSPPESADT(ph)PTSTR	ddPTM_K562_Methotrexat_30min_R1	2	MPCESSPPESADTPTSTR	18	0	P46013;P46013-2	P46013	MKI67	Antigen KI-67	1	MPCESS(0.002)PPES(0.02)ADT(0.94)PT(0.031)S(0.006)T(0.001)R;MPCESSPPES(0.001)ADT(0.995)PT(0.001)S(0.002)TR	171.29	1.9837e-10	19388500.0	2056.21	1879.04	2051.48	2441.5299999999997	2007.93	1830.57	1598.37	2116.92	2125.33	2344.3199999999997	True	False	1965.8214704363343	2189.519421781064	1620.9023831329635	2227.484855619869	2272.0079898546996	2184.3017448511364	1956.8451600568544	2042.466723718322	2026.5238721926087	1919.7409310747373	1.0240035197539907	1.1405285923425592	0.8443339186530373	1.1603049242549859	1.1834971860410097	1.1378106855430168	1.0193277271852224	1.0639283096260694	1.0556236205570146	1.0	10.90669591713359	-3.0723445557572293	19.245029245445558	1.0677168554310172	0.0053243165752627775	0.0	0.09544150109203606	0.0	0.0	0.02196681602014793	0.0	0.0008465555167828667	3.0723445557572293	-1.0623925388557545	
MPDPLDVIDVDWS(ph)GLMPK	ddPTM_K562_Methotrexat_30min_R1	1	MPDPLDVIDVDWSGLMPK	18	0	Q5T200-2;Q5T200	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	1	MPDPLDVIDVDWS(1)GLMPK	68.536	0.030168	4834500.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
MPETVPQEEMPGPPLNSES(ph)GEEAPTGR	ddPTM_K562_Methotrexat_30min_R1	1	MPETVPQEEMPGPPLNSESGEEAPTGR	27	0	O15446;O15446-2	O15446	CD3EAP	DNA-directed RNA polymerase I subunit RPA34	1	MPETVPQEEMPGPPLNS(0.345)ES(0.649)GEEAPT(0.006)GR	93.191	1.1493e-05	14578000.0	2134.7	2317.8	2389.4	2290.0	1953.8	1953.0	2078.8	2344.6	1952.2	2455.7	True	False	2040.8611440176076	2700.7770541362356	1887.8975930829959	2089.239255454368	2210.7589460678964	2330.3896096266544	2545.0238172176605	2262.139089068069	1861.4426481037817	2010.9489337804716	1.014874674207118	1.343036120295171	0.9388093160246759	1.0389320287346706	1.0993610573252068	1.1588507149436422	1.2655835135669795	1.1249112551134623	0.9256538626291089	1.0	10.973660730841855	-9.752916934425622	24.647975145867512	0.9628269260324633	1.1265883183361431	0.24516951251414587	0.11231318430145905	193.52230844458086	559704.8045687815	0.07909735104284162	0.028804768063909136	1.766375635192202e-10	9.752916934425622	0.1637613923036798	
MPGMS(ph)PANPSLHS(ph)PVPDASHSPR	ddPTM_K562_Methotrexat_30min_R1	1	MPGMSPANPSLHSPVPDASHSPR	23	0	H7C3E5;O60244	H7C3E5	MED14	Mediator of RNA polymerase II transcription subunit 14	2	MPGMS(0.995)PANPS(0.416)LHS(0.582)PVPDAS(0.004)HS(0.003)PR	50.088	0.015341	6608000.0	473.37	478.78	807.09	673.03	493.76	529.87	374.75	494.02	574.31	598.62	True	False	452.56122159723355	557.8902571314806	637.6928385374384	614.0265048464858	558.6980945902782	632.2598783680883	458.79722700707987	476.6450365867982	547.6104534537873	490.20411725360015	0.9232097521594406	1.1380774609913444	1.3008720573587862	1.2525935283583671	1.1397254223820474	1.2897890003665506	0.9359309945773622	0.9723399290426862	1.11710700538749	1.0	8.937238791312007	-8.769780698665633	24.99990392601681	1.0040394692764996	1.180185010181913	0.35969328257953415	0.10941296861188982	212.59715264800934	637171.9740603399	0.04703925302811714	0.03230579631031774	1.699101414097704e-09	8.769780698665633	0.17614554090541334	
MPGMS(ph)PANPSLHSPVPDASHSPR	ddPTM_K562_Methotrexat_30min_R1	1	MPGMSPANPSLHSPVPDASHSPR	23	0	H7C3E5;O60244	H7C3E5	MED14	Mediator of RNA polymerase II transcription subunit 14	1	MPGMS(0.49)PANPS(0.49)LHS(0.009)PVPDAS(0.003)HS(0.007)PR	61.766999999999996	0.0048843	15324000.0	407.57	324.79	575.48	489.13	389.77	410.15	380.25	312.07	338.0	484.67	True	False	389.65371081053826	378.45602701393886	454.6946123995157	446.2487323233166	441.0315868609296	489.4056827385421	465.53074201318805	301.09432121704026	322.28645377475567	396.8915664516761	0.9817636446502345	0.9535501860053207	1.1456393907903242	1.1243593213957848	1.1112143067283538	1.2330967047598633	1.1729418847953	0.758631189644339	0.8120264601641415	1.0	8.632601096613323	-9.259788860996084	24.999901443020867	0.8389966116325371	1.1052137041821042	0.5727380617045645	0.09712250527822544	104.88279890674525	1588657.254007711	0.05178225323676868	0.027887933770797242	5.498081066383742e-10	9.259788860996084	0.26621709254956705	
MPGMSPANPS(ph)LHSPVPDASHSPR	ddPTM_K562_Methotrexat_30min_R1	4	MPGMSPANPSLHSPVPDASHSPR	23	0	H7C3E5;O60244	H7C3E5	MED14	Mediator of RNA polymerase II transcription subunit 14	1	MPGMSPANPS(0.503)LHS(0.497)PVPDASHSPR;MPGMSPANPS(0.953)LHS(0.046)PVPDAS(0.001)HSPR;MPGMS(0.005)PANPS(0.567)LHS(0.425)PVPDAS(0.002)HS(0.001)PR;MPGMS(0.001)PANPS(0.901)LHS(0.098)PVPDASHSPR	101.05	5.0361e-06	65115000.0	3103.67	2931.32	4023.3999999999996	3542.0600000000004	3012.29	2633.22	2731.36	2903.0499999999997	3186.4	3901.71	True	False	2967.2363830295253	3415.6708060793135	3178.943323014197	3231.533099202925	3408.4589342055824	3142.052497624732	3343.937008560529	2800.948086035597	3038.2649594907753	3195.072510657084	0.9286914062614802	1.0690432829572505	0.9949518555246905	1.0114115058184838	1.066786097290986	0.9834056933432638	1.0465918996851906	0.8766461720956583	0.9509220680772404	1.0	11.641632957486417	-9.248645913360383	24.977533111744226	0.9353380859691397	1.0164709105114984	0.31352411397838165	0.04833087247801935	735.1696416452771	1435323.9168546232	0.021328613008985784	0.012213875799644764	5.640973852325971e-10	9.248645913360383	0.0811328245423587	
MPGMSPANPSLHS(ph)PVPDASHSPR	ddPTM_K562_Methotrexat_30min_R1	1	MPGMSPANPSLHSPVPDASHSPR	23	0	H7C3E5;O60244	H7C3E5	MED14	Mediator of RNA polymerase II transcription subunit 14	1	MPGMS(0.002)PANPS(0.376)LHS(0.622)PVPDASHSPR	111.4	1.7619999999999998e-06	9500200.0	1421.7	1331.4	1404.9	1545.0	1199.9	912.73	1173.0	904.13	1195.7	1489.7	True	False	1359.2037702955136	1551.3912200694556	1110.0306890944594	1409.5522487672467	1357.7078817621414	1089.102154835913	1436.0751094844695	872.3312354342376	1140.1121679836563	1219.9008945118576	1.11419196133912	1.2717354557644156	0.9099351382463223	1.1554645587265333	1.1129657235848058	0.8927792083238996	1.17720637466957	0.7150836919283514	0.9345940913010571	1.0	10.252548231791264	-8.595839253178656	0.9604230067929593	0.8950078883073204	1.1206541292280527	0.2610266446516514	0.13652048371806155	0.7147764928739733	1.3427134638836584	0.09235161909307198	0.06122106696409967	2.5360671395339474e-09	8.595839253178656	0.22564624092073238	
MPGTQLILY(ph)DGS(ph)LT(ph)FR	ddPTM_K562_Methotrexat_30min_R1	1	MPGTQLILYDGSLTFR	16	0	M0R1F2	M0R1F2	ZNF208		3	MPGT(0.054)QLILY(0.946)DGS(1)LT(1)FR	94.007	0.0059538	6438300.0	3080.1	2744.1	3197.2	3042.3	2827.9	2598.9	2439.0	2752.6	3192.4	3046.6	True	False	2944.702492007603	3197.515883275193	2526.1514123231595	2775.5862824754663	3199.818417230732	3101.1006433480366	2986.0078363449456	2655.7894978114678	3043.9860208003856	2494.8312178424003	1.1803213263277441	1.2816561939771196	1.0125540334178782	1.1125346927780833	1.2825791157118935	1.2430101969102163	1.196877694566981	1.064516701097026	1.2201170159450345	1.0	11.284726501259358	-12.104614448420286	4.288771451865859	0.9999751577175564	1.17577145708825	0.27993942340916655	0.08519955471468207	71621909.92941539	1.3957323490890012	17965.49462685083	0.021384080832818474	7.859330490989252e-13	12.104614448420286	0.17579629937069363	
MPLDLS(ph)PLATPIIR	ddPTM_K562_Methotrexat_30min_R1	1	MPLDLSPLATPIIR	14	0	B8ZZU6;E9PBF9;P15336-5;P15336;P15336-4;E9PEK8;H7C2N6;P15336-3;P15336-7;C9JCI8	B8ZZU6	ATF2	Cyclic AMP-dependent transcription factor ATF-2	1	MPLDLS(0.965)PLAT(0.035)PIIR	82.48299999999999	0.025568	106010000.0	5577.0	4643.4	6506.1	5574.3	5209.1	5149.9	5261.8	5181.4	5628.9	6103.8	True	False	5331.841757711247	5410.64292569514	5140.558521117136	5085.60977365907	5894.187954735533	6145.045289614084	6441.892592570652	4999.167225154522	5367.213667611605	4998.342672968699	1.066721932961125	1.0824873922622757	1.0284526006825316	1.017459207261302	1.1792284643891289	1.2294165669846555	1.288805713023388	1.0001649651173943	1.073798660631609	1.0	12.287234096780136	-7.759425286408553	24.995031535301912	1.1416315196074134	1.0497359523931784	0.15396928237149965	0.08849266737743472	95.99814630959301	1191332.3136777072	0.028429546101796724	0.034883898901497026	1.7401020297018192e-08	7.759425286408553	-0.09189556721423497	
MPPKNFS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	MPPKNFSR	8	1	E5RI87;Q86XS8-2;Q86XS8	E5RI87	RNF130	E3 ubiquitin-protein ligase RNF130	1	MPPKNFS(1)R	76.282	0.025353999999999998	0.0	2218.4	1503.4	2431.4	1847.6	1692.8	1674.2	1832.1	1751.1	1794.7	2186.8	True	False	2120.881792237158	1751.8112965693404	1921.0823670469565	1685.6237765840547	1915.4328712783986	1997.715455420864	2242.995062307327	1689.5128204670718	1711.2647887264911	1790.7493294747467	1.1843543690502145	0.9782560114559264	1.072781285145274	0.9412952158292713	1.0696264629289145	1.115575151998981	1.2525455268299504	0.9434669569093911	0.9556138095712315	1.0	10.806347686511977														
MPQDGS(ph)DDEDEEWPTLEK	ddPTM_K562_Methotrexat_30min_R1	3	MPQDGSDDEDEEWPTLEK	18	0	F8WBL2;Q13895	F8WBL2	BYSL	Bystin	1	MPQDGS(1)DDEDEEWPTLEK;MPQDGS(1)DDEDEEWPTLEK;MPQDGS(1)DDEDEEWPTLEK	108.77	0.0069315	63691000.0	9932.2	6784.799999999999	13068.1	10658.6	6880.4	6092.9	6062.4	7895.299999999999	8488.2	10762.3	True	False	9495.59238048048	7905.872878118704	10325.284396152963	9724.177086544069	7785.29319916346	7270.266693545442	7422.047522368833	7617.617823901356	8093.585434706755	8813.143181180743	1.0774353922624353	0.8970548549580596	1.1715779698440836	1.103372189312516	0.8833730530768958	0.8249345941718157	0.8421566936774153	0.8643474487249603	0.9183540160778841	1.0	13.105440928458275	-7.771700250613707	24.827217576046465	0.8765467629813352	1.0583538563693786	0.5337467860730238	0.07890392326746652	144.48219422056886	349588.19842283695	0.024660063242979702	0.02827259618031659	1.6916080741190377e-08	7.771700250613707	0.18180709338804346	
MPS(ph)DDITYES(ph)LKK	ddPTM_K562_Methotrexat_30min_R1	1	MPSDDITYESLKK	13	1	Q8N807	Q8N807	PDILT	Protein disulfide-isomerase-like protein of the testis	2	MPS(0.998)DDIT(0.027)Y(0.006)ES(0.969)LKK	58.824	0.029686	26722000.0	851.19	733.57	1007.9	948.36	556.11	657.66	809.2	920.83	787.78	1090.7	True	False	813.7727067861285	854.7799739419783	796.3555637684569	865.2187512238874	629.2482124566582	784.7434872847246	990.6836987168217	888.443886968587	751.1562797475657	893.1636609009079	0.9111126464385038	0.9570250239242681	0.8916121407863778	0.9687124421868739	0.7045161374142271	0.878611078392035	1.109184959134531	0.9947156673083182	0.8410063156733185	1.0	9.802780744893308														
MPT(ph)TT(ph)ALRWT(ph)AAARVRR	ddPTM_K562_Methotrexat_30min_R1	1	MPTTTALRWTAAARVRR	17	3	U3KQM2;Q5TYM6;A0A087X1Y7	U3KQM2	FAM72A;FAM72B		3	MPT(0.753)T(0.269)T(0.98)ALRWT(0.998)AAARVRR	40.242	0.032715	17555000.0	1198.1	1183.8	1144.1	1346.1	1153.2	1210.3	987.44	1158.5	1392.4	1049.4	True	False	1145.4329585644332	1379.4028288404847	903.9690450515843	1228.0895029550761	1304.866013207851	1444.1733458940819	1208.8985559329446	1117.7548983559486	1327.6676279170706	859.3434911060909	1.3329163139294935	1.6051821455760458	1.0519298213198243	1.4291020013130713	1.518445216275872	1.680554238020976	1.4067698987013089	1.3007079356791862	1.544978977158695	1.0	9.747091100955203	-12.175247708240155	4.09470913471051	0.9998237900898362	1.4295426735858499	0.3694234998734769	0.16856172007742087	22380299.980343305	16636501.823364545	32340.38559075898	0.04125686452187622	6.67962823407931e-13	12.175247708240155	0.4297188834960136	
MPWIEY(ph)NHEK	ddPTM_K562_Methotrexat_30min_R1	1	MPWIEYNHEK	10	0	Q5TGI0	Q5TGI0	FAXC	Failed axon connections homolog	1	MPWIEY(1)NHEK	65.24600000000001	0.033716	0.0	0.0	65.736	0.0	118.85	0.0	0.0	136.16	146.59	62.193000000000005	111.68	True	False	0.0	76.59775667904889	0.0	108.43060502652904	0.0	0.0	166.69734604211874	141.43434661199709	59.30166100477334	91.4536697986737	0.0	0.8375580427518255	0.0	1.1856342699557973	0.0	0.0	1.82275185248538	1.5465136273191764	0.6484339134265485	1.0	6.514969157634683	-8.75561015153437	24.99869888598506	1.2999676700598397	0.36785313169115064	0.4680204933690668	0.47741169334245614	124.1285701635582	532329.0719480796	0.18305110263719712	0.1379001914928548	1.7554555957678577e-09	8.75561015153437	-0.9321145383686891	
MQAS(ph)IEK	ddPTM_K562_Methotrexat_30min_R1	4	MQASIEK	7	0	P06748;P06748-3;P06748-2	P06748	NPM1	Nucleophosmin	1	MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK	98.04	0.0093718	207036000.0	12208.3	9875.7	16743.9	13786.599999999999	9827.9	8800.1	7442.7	8370.5	10251.5	11347.1	True	False	11671.637749805664	11507.4915668018	13229.584208932103	12577.950183077366	11120.441112734516	10500.594779147741	9111.91493381079	8076.1047705554365	9774.910002579609	9292.030234352884	1.2560912368381356	1.2384259711358123	1.423756044187413	1.3536277719562673	1.1967719467401159	1.1300646375779926	0.9806161521218256	0.8691431868891109	1.0519670896508178	1.0	13.181778133049015	-8.381840751053874	1.6428010407005558	0.96188058917	1.3159433972504133	0.8297466951050563	0.0687659236391503	0.14850187721681923	0.7980829097320482	0.032651714611371	0.02712852962733414	4.151062276462506e-09	8.381840751053874	0.35406280808041335	
MQHLIAR	ddPTM_K562_Methotrexat_30min_R1	2	MQHLIAR	7	0	B4DNK4;H3BTN5;P14618-2;P14618;H3BR70;P14618-3	B4DNK4	PKM	Pyruvate kinase;Pyruvate kinase PKM	0	;	105.2	0.016338	11380200.0	7860.6	6213.9	7994.3	7662.5	6945.7	6924.8	7116.5	8747.099999999999	8668.0	10020.5	False	True	7515.057436016685	7240.641356759493	6316.40567857345	6990.74052179873	7859.181293737231	8262.919594850313	8712.556280175806	8439.459535096525	8265.026571951432	8205.690349369714	0.9158348799493662	0.8823927114573185	0.7697592048496711	0.8519381336800864	0.9577721019342268	1.0069743364718844	1.061770053368517	1.0284886677139562	1.0072311067144126	1.0	13.002408998256712	-7.951681730064557	2.5750300311398706	1.0249095351459387	0.8501359662242668	0.8070679763772423	0.03817701764017773	0.12404687042936852	1.668643062154191	0.014174975038079565	0.015922834076640635	1.1176820338581387e-08	7.951681730064557	-0.17477356892167195	
MQIVRLR	ddPTM_K562_Methotrexat_30min_R1	1	MQIVRLR	7	1	A3KN83-3;A3KN83-2;A3KN83	A3KN83-3	SBNO1	Protein strawberry notch homolog 1	0		46.663000000000004	0.029269999999999997	2101400.0	174.19	0.0	126.84	213.33	128.22	0.0	156.99	61.9	162.88	165.23	False	True	166.53281616921677	0.0	100.21801737115898	194.62769011619213	145.08317743107068	0.0	192.19900378343291	59.722941914745995	155.3077443515746	135.30524588856423	1.230793492710336	0.0	0.7406809448740616	1.43843417775897	1.0722657239066653	0.0	1.4204844943094497	0.4413941345920401	1.147832394314439	1.0	7.080073964571081	-4.303565852402526	0.05527030405008292	1.3198781835093099	1.6398444064372718e-07	0.011837220320260022	0.5069939665009727	1872.0422177890484	9.94634526359208	60.89698290677869	220.9902203620393	4.970889940282987e-05	4.303565852402526	-1.3198780195248692	
MQLNY(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	MQLNYK	6	0	Q9NYV9	Q9NYV9	TAS2R13	Taste receptor type 2 member 13	1	MQLNY(1)K	59.608999999999995	0.034010000000000006	18490000.0	3658.9	5024.6	6389.0	4527.4	6085.2	6256.8	4635.2	4516.5	3482.9	4408.2	True	False	3498.0591370431544	5854.829746403026	5048.036210850953	4130.489871241965	6885.5104609542295	7465.838048905308	5674.761592056619	4357.652135023428	3320.9807392073885	3609.8322636686357	0.969036476361955	1.621911855941146	1.3984129572050212	1.1442331857946748	1.9074322456070454	2.0681952798875627	1.572029163008648	1.2071619445815442	0.9199820093115101	1.0	11.817716086318683	-9.465355463859044	3.261211003551921	0.9717071248214459	1.544013436797545	0.3608656223282689	0.3052522371632566	0.29459949606103497	6.086127134402404	0.22931724878885837	0.08850665078171631	3.42487350768319e-10	9.465355463859044	0.5723063119760992	
MQNNSSPS(ph)IS(ph)PNTSFTSDGSPSPLGGIKR	ddPTM_K562_Methotrexat_30min_R1	1	MQNNSSPSISPNTSFTSDGSPSPLGGIKR	29	1	Q9H0D6-2;Q9H0D6	Q9H0D6-2	XRN2	5-3 exoribonuclease 2	2	MQNNS(0.08)S(0.08)PS(0.84)IS(0.84)PNT(0.158)S(0.002)FTSDGSPSPLGGIKR	131.26	4.3374999999999995e-18	13212000.0	1439.8	1208.1	2030.8	1462.0	1335.9	1327.5	1298.0	1404.5	1650.4	1890.9	True	False	1376.5081159678414	1407.7179908111077	1604.5628325240432	1333.8287299014337	1511.5942655604993	1584.020587188626	1589.1095414414672	1355.1029389218209	1573.6732642303466	1548.439686804371	0.8889646317504575	0.9091203246774946	1.0362449672389227	0.8614017977375369	0.9762048069693225	1.0229785510455922	1.0262650557097446	0.8751409244220849	1.016296131932689	1.0	10.596599474427752	-7.970122409698979	24.996877839908752	0.9845906694675769	0.9293854171507447	0.2109191474531943	0.05875165040067045	380.9890542000894	318750.47971751436	0.018320358390517443	0.020773136075357485	1.0712173307067414e-08	7.970122409698979	-0.055205252316832154	
MQPDCS(ph)NPLTLDECAR	ddPTM_K562_Methotrexat_30min_R1	1	MQPDCSNPLTLDECAR	16	0	Q9UBB9	Q9UBB9	TFIP11	Tuftelin-interacting protein 11	1	MQPDCS(1)NPLTLDECAR	92.8	0.005495399999999999	10621000.0	650.81	779.38	1149.2	832.39	642.51	690.2	585.91	827.79	681.37	801.55	True	False	622.2011716578907	908.1592978051159	907.9986247472077	759.4156610688473	727.0113268697336	823.5713817533633	717.315232223397	798.676156504161	649.6932574216133	656.3815278216949	0.9479260845788315	1.383584484497888	1.3833396984228725	1.1569729324789002	1.1076047939411622	1.2547144409845203	1.092832753237161	1.2167864613050479	0.9898103921018654	1.0	9.358390828237829	-9.601782689312238	0.6900431106125803	0.988371659644379	1.2249379068546147	0.2317150786719001	0.12954417956768258	0.9749929660311858	1.0057257662256618	0.12503958239670854	0.05553989273674482	2.5015967884487967e-10	9.601782689312238	0.23656624721023567	
MQPS(ph)S(ph)LVQR	ddPTM_K562_Methotrexat_30min_R1	2	MQPSSLVQR	9	0	G3XAL1;Q9Y239	G3XAL1	NOD1	Nucleotide-binding oligomerization domain-containing protein 1	2	MQPS(1)S(1)LVQR;MQPS(1)S(1)LVQR	90.149	0.024868	16012300.0	413.28	591.42	586.96	487.36	510.58	385.76	323.24	372.72	473.06	409.63	True	False	395.1127060474996	689.1421025788475	463.76511728299806	444.63390547521385	577.7302194100456	460.30266042477155	395.73479828624005	359.61122634029283	451.0675438541004	335.4420376041431	1.1778866741614962	2.054429753351629	1.3825491897061803	1.3255163504579253	1.7222952243446246	1.3722271177233223	1.1797412188189984	1.0720517586548646	1.3446959333892659	1.0	8.389919688583662	-8.610325581855959	3.3402939025051683	1.153649079377666	1.5429399226157972	0.3624986337868522	0.2386839983411995	0.26742231684358336	5.949008305192453	0.09479136165264637	0.07159089444645624	2.452869359307066e-09	8.610325581855959	0.38929084323813123	
MQS(ph)LQLDCVAVPSSR	ddPTM_K562_Methotrexat_30min_R1	1	MQSLQLDCVAVPSSR	15	0	Q13546-2;Q13546	Q13546-2	RIPK1	Receptor-interacting serine/threonine-protein kinase 1	1	MQS(1)LQLDCVAVPSSR	132.5	0.00012997	14609000.0	2279.0	1607.3	2259.9	2814.5	1741.6	1885.7	1833.9	1807.1	2410.8	2647.8	True	False	2178.8178887975487	1872.8790055713055	1785.5778733607858	2567.7571547931507	1970.650926641339	2250.0848371085435	2245.198758127509	1743.5432687259686	2298.72243420172	2168.257762293411	1.0048703280060984	0.8637713827853764	0.8235081199350318	1.1842490313869238	0.9088637711398948	1.03773862879134	1.0354851702468788	0.8041217695823152	1.0601702778042006	1.0	11.082320559009535														
MQSRVGQRGSGLS(ph)MSAAR	ddPTM_K562_Methotrexat_30min_R1	1	MQSRVGQRGSGLSMSAAR	18	2	C9J330;C9JQE8;Q9Y618-5;Q9Y618-4;Q9Y618	C9J330	NCOR2	Nuclear receptor corepressor 2	1	MQS(0.001)RVGQRGS(0.052)GLS(0.831)MS(0.116)AAR	58.163999999999994	0.025355000000000003	0.0	389.66	432.38	534.8	508.24	459.52	578.84	435.28	422.43	438.03	355.7	True	False	372.53101296570986	503.8234457966283	422.55278847442275	463.6833882935054	519.954934433985	690.6926378066017	532.9026203379366	407.57289746439665	417.6660809081547	291.27928319652784	1.2789478499037674	1.7296919996081412	1.4506791689312277	1.5918859151430125	1.7850735168253227	2.3712384561884114	1.8295246214897614	1.3992512374778292	1.4339024606372468	1.0	8.186259285374243	-9.907515578483713	1.5835129087707767	1.026440774562143	1.7211434331704625	0.3725471946596338	0.2800791740262335	0.41732512301785374	2.311748693119729	0.2890126880021238	0.08537504145644116	1.2373268052562765e-10	9.907515578483713	0.6947026586083194	
MQTNQT(ph)PPTYNK	ddPTM_K562_Methotrexat_30min_R1	1	MQTNQTPPTYNK	12	0	F5H1T6;B7Z641;B7Z2A9;Q93050-1;Q93050;Q93050-3	F5H1T6	ATP6V0A1	V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1	1	MQT(0.005)NQT(0.967)PPT(0.027)YNK	71.933	0.031972	0.0	1542.0	1319.3	1855.6	1879.7	1246.9	1172.4	1306.9	1689.9	1418.7	2149.0	True	False	1474.2155263386671	1537.2919007342884	1466.1349182743807	1714.9096194225208	1410.8892055748092	1398.9497072843271	1600.0055929968055	1630.465259155562	1352.744946657533	1759.7952757642358	0.8377199022189962	0.8735629205884079	0.8331281135174512	0.9744938192755278	0.8017348523464439	0.7949502573114919	0.9091998455911086	0.9265084874418082	0.7686944983245675	1.0	10.78119188862754	-13.21396297588794	2.42618139729955	1.4594533848112445	0.8609869533170537	0.32646750602483654	0.061128180521173046	6315654.957157343	1736148.7727385326	15871030.747508481	0.015312308314305568	6.109941106472414e-14	13.21396297588794	-0.5984664314941909	
MRDAGLLVEQPPLAGVAAS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	MRDAGLLVEQPPLAGVAASPR	21	1	Q13469-3;Q13469-4;Q13469-2;Q13469	Q13469-3	NFATC2	Nuclear factor of activated T-cells, cytoplasmic 2	1	MRDAGLLVEQPPLAGVAAS(1)PR;MRDAGLLVEQPPLAGVAAS(1)PR;MRDAGLLVEQPPLAGVAAS(1)PR;MRDAGLLVEQPPLAGVAAS(1)PR	105.44	7.9765e-05	134612000.0	5603.2	3976.77	3688.96	5017.4	3829.65	3526.38	3789.39	5299.16	6097.7	6958.2	True	False	5356.890037082243	4633.863648967709	2914.697708621181	4577.532332016043	4333.316100833719	4207.803026930488	4639.257168908226	5112.78553920752	5814.219257935885	5698.002553663427	0.9401347203044211	0.8132435191676864	0.5115297301415264	0.8033573675871736	0.7604973953631686	0.7384698387376394	0.8141900824395911	0.8972943572867211	1.020396042855007	1.0	12.476240552894005	-9.398322893380154	1.709931561931478	1.0143855176431187	0.754196308845733	0.4864552417937432	0.10075616680935787	0.33949472642388623	1.7716750906926737	0.08745794486526799	0.030837995993460883	3.9964750555822326e-10	9.398322893380154	-0.2601892087973857	
MREDYDS(ph)VEQDGDEPGPQR	ddPTM_K562_Methotrexat_30min_R1	2	MREDYDSVEQDGDEPGPQR	19	1	Q9Y5S9-2;Q9Y5S9	Q9Y5S9-2	RBM8A	RNA-binding protein 8A	1	MREDY(0.004)DS(0.996)VEQDGDEPGPQR;MREDY(0.301)DS(0.699)VEQDGDEPGPQR	131.48	6.653100000000001e-07	70122000.0	2905.3999999999996	2626.85	3195.94	3262.7	2922.3799999999997	2571.26	2499.0	3003.2999999999997	3320.0	3301.03	True	False	2777.6820948277314	3060.8923136844273	2525.155869104239	2976.664156668544	3306.7241932694747	3068.1196045307906	3059.4643636843043	2897.672236713355	3165.653924651448	2703.1814793652907	1.0275603454785187	1.1323295668639781	0.9341421907407963	1.1011706684848503	1.2232712522305	1.1350031908516878	1.1318013189416603	1.0719488346722954	1.1710844975879113	1.0	11.400442655799012	-7.5091361958019025	24.923631044589794	1.1301146615861377	1.0374782222294696	0.24175055905209275	0.0710422312548716	836.2765346090958	1516681.5693284369	0.019569832344290303	0.027698308126770044	3.096448093312935e-08	7.5091361958019025	-0.0926364393566681	
MREDYDSVEQDGDEPGPQR	ddPTM_K562_Methotrexat_30min_R1	4	MREDYDSVEQDGDEPGPQR	19	1	Q9Y5S9-2;Q9Y5S9	Q9Y5S9-2	RBM8A	RNA-binding protein 8A	0	;;;	129.36	6.1116e-06	180035000.0	5946.7	5501.2	6305.500000000001	5808.200000000001	5353.9	5318.0	5236.0	6293.3	5980.7	7159.0	False	True	5685.290188377526	6410.179795588168	4982.061719755938	5299.004123812249	6058.03169277967	6345.628235532287	6410.306285814731	6071.961071923602	5702.658562398467	5862.435727871643	0.9697829455678433	1.0934328482464035	0.8498279471227013	0.9038912100339652	1.0333642830365046	1.0824218004409691	1.0934544246410003	1.0357403225856816	0.9727456004824836	1.0	12.517284485558479	-7.880831928552233	7.6696994537588346	1.0442259845325386	0.9569725051017948	0.2642935579732305	0.06642401234570013	0.3316617841877366	20.896137547798975	0.02195941124666351	0.024955100069940783	1.3157339211394787e-08	7.880831928552233	-0.0872534794307438	
MRKT(ph)SNS(ph)CIMENGHQPGAEK	ddPTM_K562_Methotrexat_30min_R1	1	MRKTSNSCIMENGHQPGAEK	20	2	I3L3R4	I3L3R4	SMTNL2		2	MRKT(0.537)S(0.537)NS(0.925)CIMENGHQPGAEK	40.085	0.03366	27755000.0	5882.5	5022.6	7568.5	7029.4	4869.6	4716.5	5188.0	6115.7	5900.1	7508.8	True	False	5623.9123435066185	5852.499280397209	5979.975279672157	6413.143415847568	5510.037754003603	5627.896873427613	6351.541063943243	5900.607364588242	5625.805638806028	6148.883558240341	0.9146233279974558	0.9517986842593666	0.9725302525298558	1.042976884357012	0.8961037726303018	0.9152713366779349	1.0329584230671134	0.9596225572820654	0.9149312367879666	1.0	12.586108771340657														
MRPEGSLTY(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	MRPEGSLTYR	10	1	A0A087WSY7;C9JPU3;A0A1W2PPS3;F2Z2I4;A6NGT6;A6NEC3;A0A494C1R9;Q01534-2;Q01534;P0CW01;P0CV98;A6NKD2;P0CV99	A0A087WSY7	TSPY2;TSPY10;TSPY4;TSPY1;TSPY3	Testis-specific Y-encoded protein 1;Testis-specific Y-encoded protein 10;Testis-specific Y-encoded protein 3;Testis-specific Y-encoded protein 2;Testis-specific Y-encoded protein 4	1	MRPEGSLT(0.157)Y(0.843)R	84.81700000000001	0.018616999999999998	47104000.0	0.0	165.53	135.3	237.53	256.6	126.12	206.51	115.87	144.87	191.2	True	False	0.0	192.8810189710808	106.90237898389944	216.70611368911608	290.34739766660994	150.49090505177364	252.8251243475172	111.79478642425877	138.13502532055884	156.57182723411898	0.0	1.2319011815750822	0.6827689302242751	1.3840683698803578	1.8544038400500928	0.9611620922501425	1.6147548943749148	0.7140159784754513	0.8822470029298953	1.0	7.290680834293141	-6.259351615317671	24.999999949338807	1.1620981706873292	5.9621680308509326e-05	0.4737161156881964	0.3624679981540747	170.44755565181225	2040887.1253869452	0.09232372534442555	0.5894704449731393	5.503619296470652e-07	6.259351615317671	-1.1620385490070206	
MRPVDADEAREPREEPGS(ph)PLSPAPR	ddPTM_K562_Methotrexat_30min_R1	1	MRPVDADEAREPREEPGSPLSPAPR	25	3	B2RBV5	B2RBV5	LOC93622		1	MRPVDADEAREPREEPGS(0.731)PLS(0.269)PAPR	43.035	0.023911	33628000.0	105.4	140.53	244.27	170.78	101.41	169.03	123.33	183.13	349.38	0.0	True	False	100.76674220239653	163.75019389842313	193.00106514705928	155.80798255305533	114.7471925072912	201.6926552561155	150.98989194605247	176.68921410092784	333.13740005865134	0.0											0.0														
MRS(ph)PPDPHASQGPPASVHASDQPYGTGLGQR	ddPTM_K562_Methotrexat_30min_R1	1	MRSPPDPHASQGPPASVHASDQPYGTGLGQR	31	1	Q2M3G4-2;Q2M3G4	Q2M3G4-2	SHROOM1	Protein Shroom1	1	MRS(0.976)PPDPHAS(0.021)QGPPAS(0.003)VHASDQPYGTGLGQR	60.645	0.00036814	20350000.0	270.02	228.25	428.73	351.05	197.82	277.81	173.24	262.61	349.26	275.08	True	False	258.15024411281894	265.9644329133642	338.7454319421079	320.2739915402861	223.83679737493676	331.4928507170411	212.0934799378426	253.37385745123498	333.0229788324591	225.26034642030055	1.1460083774849168	1.1806979663305506	1.5037952188445185	1.4217948104488172	0.9936804277007207	1.4715987788570979	0.941548227676563	1.124804527195741	1.4783914884472846	1.0	7.815449561680149	-7.738560060952769	24.999745716598976	1.1784009619306535	1.317241537550247	0.11166632900706353	0.19863997278167442	589.2537794383351	643862.3182377665	0.058576166697438835	0.07556949754034215	1.8257442394854756e-08	7.738560060952769	0.13884057561959362	
MRSPPDPHASQGPPAS(ph)VHASDQPYGTGLGQR	ddPTM_K562_Methotrexat_30min_R1	1	MRSPPDPHASQGPPASVHASDQPYGTGLGQR	31	1	Q2M3G4-2;Q2M3G4	Q2M3G4-2	SHROOM1	Protein Shroom1	1	MRS(0.033)PPDPHAS(0.106)QGPPAS(0.861)VHASDQPYGTGLGQR	72.822	1.5225999999999998e-06	20295000.0	248.28	202.99	215.22	324.42	240.62	173.98	166.24	130.26	249.93	337.26	True	False	237.3659084820779	236.53064725995094	170.04826315532037	295.9786022945441	272.2657475703027	207.59917269986968	203.52355174825078	125.67868196792911	238.31080885184838	276.1789458837813	0.8594641699514768	0.8564398220256995	0.6157176920607057	1.0716914040909356	0.9858309318222784	0.7516835580480106	0.7369263833525362	0.45506250147256294	0.8628855037781621	1.0	8.109459531721106	-8.449152874055624	8.117904481885468	0.7218851358865273	0.8728730374092416	0.08562779577787616	0.1695654436365196	0.6482811434479876	65.61053796420055	0.06020905889701454	0.05292070081239648	3.5550615641137795e-09	8.449152874055624	0.15098790152271435	
MRST(ph)FAT(ph)TRTATATPR	ddPTM_K562_Methotrexat_30min_R1	1	MRSTFATTRTATATPR	16	2	H0YMD1	H0YMD1	LDLR		2	MRS(0.188)T(0.579)FAT(0.541)T(0.507)RT(0.18)AT(0.005)AT(0.001)PR	48.711000000000006	0.03269	1325300.0	159.71	305.61	313.26	259.39	318.92	209.08	161.35	330.39	388.83	315.02	True	False	152.68933963135436	356.10685801819585	247.5110069511924	236.64968142895543	360.8635700071522	249.48175093739954	197.53684477009296	318.7699964331655	370.75337816934405	257.96682539378736	0.5918952539663714	1.3804366413185003	0.959468360217892	0.9173647854436662	1.398875880479176	0.967107885118812	0.7657451475341924	1.2357015129622262	1.437213399836927	1.0	8.011041736364366	-6.23992216223744	23.8379259578666	1.1071876264627596	0.5918942566528086	0.3357554308496874	0.2215238412953015	3593.593693282759	3981063.925522328	0.05577833935859629	2.3664625718041816	5.755430815704241e-07	6.23992216223744	-0.515293369809951	
MS(ph)EASMIVSGADRYTMR	ddPTM_K562_Methotrexat_30min_R1	1	MSEASMIVSGADRYTMR	17	1	A2A341;Q9BX26	A2A341	SYCP2	Synaptonemal complex protein 2	1	MS(0.985)EAS(0.014)MIVS(0.001)GADRYTMR	58.824	0.031481999999999996	0.0	608.29	593.21	562.62	637.95	763.14	566.62	749.3	783.43	781.71	951.85	True	False	581.5502999458802	691.2278696540493	444.53375065721747	582.021913981272	863.5062862638216	676.1112957535358	917.3495989230283	755.8763228476488	745.3684727226762	779.4607413849172	0.7460931244755226	0.8868026738920821	0.5703093524215039	0.7466981761610685	1.1078252443215746	0.8674090430163887	1.1769028896735905	0.9697426473392816	0.9562617244818935	1.0	9.606332551202469	-7.74717014766893	24.59316878636504	1.0124239455495592	0.7362014365242524	0.6178074031285636	0.10617120752713019	129.00666505798893	222343.09587045084	0.03078798561576041	0.039545832115005966	1.789904468797163e-08	7.74717014766893	-0.27622250902530676	
MS(ph)EKEGMSEVLEDTISQFRKES(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	MSEKEGMSEVLEDTISQFRKESR	23	3	C9K0I1;A4D1F6	C9K0I1	LRRD1	Leucine-rich repeat and death domain-containing protein 1	2	MS(0.981)EKEGMS(0.019)EVLEDT(0.013)IS(0.266)QFRKES(0.721)R	46.971000000000004	0.017344	12526000.0	187.83	275.08	366.88	269.89	242.61	378.8	288.09	323.51	304.34	420.92	True	False	179.57321810129167	320.53229443946657	289.8769017118482	246.22916273125708	274.5174674508819	451.99773892809907	352.70151601993217	312.13196993278626	290.1912998278379	344.68730920180633	0.5209742665522848	0.9299219492058596	0.8409851305031136	0.714355173973335	0.7964246437926102	1.3113268950191173	1.0232506582173981	0.9055510939918021	0.8418972560951982	1.0	8.429144371889635	-8.035983748210036	24.99137596700757	1.0157017649733477	0.7687746887854228	0.4211055062531094	0.1501959542189399	635.6995081000348	441503.35398779355	0.05075068071592634	0.050769245820215594	9.204840166600947e-09	8.035983748210036	-0.24692707618792498	
MS(ph)ELPS(ph)Y(ph)	ddPTM_K562_Methotrexat_30min_R1	2	MSELPSY	7	0	H7C0Q4	H7C0Q4	EHBP1		3	MS(1)ELPS(1)Y(1);MS(1)ELPS(1)Y(1)	58.23	0.032143	441590000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
MS(ph)GGSTMS(ph)SGGGNTNNSNSK	ddPTM_K562_Methotrexat_30min_R1	1	MSGGSTMSSGGGNTNNSNSK	20	0	A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70	A0A6E1WJ75	LDB1	LIM domain-binding protein 1	2	MS(0.469)GGS(0.412)T(0.416)MS(0.618)S(0.079)GGGNT(0.006)NNSNSK	63.754	0.017141999999999998	0.0	121.93	0.0	59.085	129.85	119.84	137.04	0.0	181.01	136.08	289.04	True	False	116.57010319485966	0.0	46.68386594429931	118.46625210513082	135.60106054702473	163.52104050344954	0.0	174.64377570255533	129.75367050197866	236.6920551451348	0.4924968990758106	0.0	0.1972346132009953	0.5005079364936423	0.5729007695838244	0.6908598617861581	0.0	0.7378522933330707	0.5481961378991632	1.0	7.886867470857474	-14.296074844674786	0.11042356579998505	2.374532794792261	9.23651412340956e-14	0.4170699135110999	0.23353630107150222	103.55063999245097	1.1308103840921095	36.37676345939198	3.348608147251346	5.057374975975913e-15	14.296074844674786	-2.374532794792169	
MS(ph)GGSTMSSGGGNTNNSNSK	ddPTM_K562_Methotrexat_30min_R1	4	MSGGSTMSSGGGNTNNSNSK	20	0	A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70	A0A6E1WJ75	LDB1	LIM domain-binding protein 1	1	MS(0.373)GGS(0.312)T(0.06)MS(0.104)S(0.152)GGGNTNNSNSK;MS(0.97)GGS(0.006)T(0.006)MS(0.018)S(0.001)GGGNTNNSNSK;MS(0.438)GGS(0.147)T(0.278)MS(0.049)S(0.071)GGGNT(0.016)NNSNSK;MS(0.823)GGS(0.017)T(0.157)MS(0.003)SGGGNTNNSNSK	194.19	1.8039e-16	15516400.0	5308.1900000000005	4279.96	7883.57	5587.22	4172.6	4153.63	3899.83	4953.5	5131.9	6705.030000000001	True	False	5074.848323447244	4987.150643118868	6228.916392358467	5097.397097318664	4721.37003703701	4956.260212101163	4774.466150230873	4779.282597329471	4893.319089132159	5490.684093930883	0.9242652166160348	0.9082931302916162	1.1344517888478756	0.9283719496725484	0.8598873940418038	0.9026671590120356	0.8695576122305633	0.8704348156930467	0.8912039019948316	1.0	12.42277019298852	-7.514034419761958	24.648408837319256	0.8914623327490099	0.9893456044218689	0.257923403513278	0.06759123858722202	431.6327516881677	1202926.8282784692	0.019392386570569266	0.026430203344449184	3.06172076913789e-08	7.514034419761958	0.09788327167285904	
MS(ph)HPPNIPK	ddPTM_K562_Methotrexat_30min_R1	1	MSHPPNIPK	9	0	P31644	P31644	GABRA5	Gamma-aminobutyric acid receptor subunit alpha-5	1	MS(1)HPPNIPK	78.556	0.028579000000000004	5016000.0	0.0	132.04	147.53	138.43	0.0	0.0	65.551	0.0	0.0	0.0	True	False	0.0	153.8573657037486	116.56546911673823	126.29405682644021	0.0	0.0	80.25248039370538	0.0	0.0	0.0											0.0														
MS(ph)KLLNPEEMTS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	MSKLLNPEEMTSR	13	1	Q9NR22-2;Q9NR22	Q9NR22-2	PRMT8	Protein arginine N-methyltransferase 8	2	MS(1)KLLNPEEMT(0.14)S(0.86)R	63.754	0.030406	0.0	0.0	0.0	164.76	74.67399999999999	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	130.17912757861987	68.12744635886438	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
MS(ph)LWES(ph)LGESWMRPR	ddPTM_K562_Methotrexat_30min_R1	1	MSLWESLGESWMRPR	15	1	A0A087WX39;Q9H6S3-2	A0A087WX39	EPS8L2		2	MS(1)LWES(0.58)LGES(0.42)WMRPR	110.51	0.03293	22354000.0	0.0	0.0	0.0	0.0	120.83	114.59	0.0	116.32	169.95	0.0	True	False	0.0	0.0	0.0	0.0	136.7212628996745	136.7328957332916	0.0	112.22895966919639	162.049061594733	0.0											0.0														
MS(ph)MDVTFLGTGAAY(ph)PS(ph)PT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	MSMDVTFLGTGAAYPSPTR	19	0	E7EUB6;K7EPH7;K7EIJ1;Q9H777	E7EUB6	ELAC1	Zinc phosphodiesterase ELAC protein 1	4	MS(0.645)MDVT(0.355)FLGT(0.083)GAAY(0.957)PS(0.965)PT(0.995)R	43.81	0.032254000000000005	0.0	910.21	855.71	1176.7	823.01	869.46	1036.1	804.04	1153.7	767.17	982.56	True	False	870.1982582546807	997.1015329169543	929.726750556944	750.857991105458	983.8092298332448	1236.3116613078225	984.3664373656369	1113.1237170766153	731.5044341490515	804.6088627989326	1.0815171178050254	1.239237571219899	1.1555015033301685	0.9331962719047172	1.2227173665611155	1.5365374636903175	1.2234098863159364	1.3834345711834135	0.9091428990782202	1.0	9.652143819169597	-6.245364712096805	21.65027340407488	1.1957602953736892	1.0815165467193422	0.015947949326022948	0.1859474229280628	2071.2928658180062	2789428.148469802	0.047023313305146905	0.9524454605360698	5.683754196973963e-07	6.245364712096805	-0.11424374865434705	
MS(ph)PLSAARAALR	ddPTM_K562_Methotrexat_30min_R1	1	MSPLSAARAALR	12	1	C9JB06;Q8N5I4	C9JB06	DHRSX	Dehydrogenase/reductase SDR family member on chromosome X	1	MS(0.901)PLS(0.099)AARAALR	81.128	0.02401	27403000.0	2595.5	2868.7	1832.4	2368.5	3103.0	2754.2	3273.2	3269.3	2543.1	2649.8	True	False	2481.4049277639497	3342.703915437319	1447.8042812276233	2160.85728233348	3511.0988891640327	3286.4101704217787	4007.2984214531643	3154.31686594312	2424.8718360786447	2169.895542913015	1.1435596224289872	1.540490705349736	0.6672230310607452	0.9958347024542012	1.6180958114004396	1.514547638551245	1.846770198013078	1.4536722176536436	1.117506252316336	1.0	11.083409878784098	-7.756764505980795	24.999964509139033	1.4733383298777356	1.0892169556999154	0.2233583052475403	0.3010908713599971	165.77756688505903	886527.9109398384	0.09216042989460246	0.1150433795671711	1.7507957915739406e-08	7.756764505980795	-0.3841213741778202	
MS(ph)PMGTAS(ph)GSNSPTSDSASVQR	ddPTM_K562_Methotrexat_30min_R1	1	MSPMGTASGSNSPTSDSASVQR	22	0	Q5QPB1;O76080	Q5QPB1	ZFAND5	AN1-type zinc finger protein 5	2	MS(0.994)PMGT(0.012)AS(0.737)GS(0.077)NS(0.156)PT(0.019)S(0.004)DS(0.001)ASVQR	107.57	3.9107e-06	0.0	468.05	358.84	546.15	679.87	481.64	619.55	304.16	427.96	364.01	485.2	True	False	447.47508242724575	418.13221076289847	431.52057858135004	620.2668526662706	544.9841021517774	739.2692691470526	372.37562259232385	412.9084042299629	347.0872545519199	397.325578315871	1.126217658384697	1.0523667077644983	1.0860629220258613	1.561104762737331	1.3716310549695316	1.8606133344864568	0.9372052616665114	1.0392192870646342	0.8735587978581838	1.0	8.634177861432903														
MS(ph)PMGTASGSNSPTSDSASVQR	ddPTM_K562_Methotrexat_30min_R1	5	MSPMGTASGSNSPTSDSASVQR	22	0	Q5QPB1;O76080	Q5QPB1	ZFAND5	AN1-type zinc finger protein 5	1	MS(0.994)PMGT(0.006)ASGSNSPTSDSASVQR;MS(0.962)PMGT(0.036)AS(0.001)GSNSPTSDSASVQR;MS(0.999)PMGT(0.001)ASGSNSPTSDSASVQR;MS(0.84)PMGT(0.159)AS(0.001)GSNSPTSDSASVQR;MS(1)PMGTASGSNSPTSDSASVQR	207.31	3.2104999999999995e-92	69360600.0	8009.929999999999	7062.68	9968.05	8461.38	7143.23	6342.08	7329.370000000001	7909.1	8177.009999999999	8747.82	True	False	7657.823068019369	8229.667824966304	7875.8925264631125	7719.583952539944	8082.689951029067	7567.597201956487	8973.167796421301	7630.932470079443	7796.862589883772	7163.505029891064	1.0690050521449586	1.1488325604053429	1.0994467783018897	1.0776266534787842	1.1283149683433644	1.056409839928816	1.252622530308708	1.0652512196526631	1.0884144782965748	1.0	12.806449940859297	-10.137217697765136	1.83302308730246	1.0010740103614941	1.1155796248797136	0.2796448217921298	0.05445399135419162	0.7018536751463249	4.776616038449572	0.050167948317855766	0.01415186955648761	7.29091948447912e-11	10.137217697765136	0.1145056145182195	
MS(ph)PTPPLFSLPEAR	ddPTM_K562_Methotrexat_30min_R1	2	MSPTPPLFSLPEAR	14	0	J3KRD7;J3QQZ3;J3KT14;A0A087WWS1;Q96FV9-2;Q96FV9	J3KRD7	THOC1	THO complex subunit 1	1	MS(1)PTPPLFSLPEAR;MS(1)PTPPLFSLPEAR	120.6	0.00088502	15429600.0	2255.8	2061.5299999999997	2465.5	2774.5	1891.22	2026.34	2200.8	2424.7	2362.4	2767.4	True	False	2156.6377330186533	2402.162792481436	1948.0252430510282	2531.2638926891436	2139.948579170094	2417.901526661996	2694.385422807689	2339.421926666956	2252.5725396375233	2266.1970433457163	0.9516549937046452	1.0599973199748711	0.8596009992913268	1.1169654907642514	0.9442906059089926	1.066942318083828	1.188945785062809	1.0323117901579881	0.9939879439220879	1.0	11.146057592024714	-8.288565906064267	22.66922058260544	1.066738864229094	0.990782898064467	0.14674298560543309	0.08214649749250885	429.65152408608503	359050.1120608731	0.02835069727813632	0.025014444666875076	5.145577147317801e-09	8.288565906064267	-0.07595596616462708	
MS(ph)RAEPT(ph)ATMDDMALPPPPPELLSDQQK	ddPTM_K562_Methotrexat_30min_R1	1	MSRAEPTATMDDMALPPPPPELLSDQQK	28	1	C9K0J5;Q70E73	C9K0J5	RAPH1	Ras-associated and pleckstrin homology domains-containing protein 1	2	MS(0.931)RAEPT(0.75)AT(0.317)MDDMALPPPPPELLS(0.002)DQQK	44.711000000000006	0.027761	24819000.0	570.88	493.62	784.15	682.55	398.53	574.38	434.34	632.05	597.96	580.7	True	False	545.7847987524109	575.1823148946107	619.5676310437896	622.7119012272392	450.94368040558845	685.3708059279874	531.75180140962	609.8204432506499	570.1609701158372	475.52960290195045	1.1477409511873151	1.2095615317837694	1.3029002343131482	1.309512378255947	0.9482978087035491	1.441278948241008	1.1182307014422865	1.2824026927644059	1.1990020529455847	1.0	8.893391345015083	-10.045809272622126	20.62640485072958	0.9999999965155265	1.2215925648459514	0.2147410170177042	0.12540865781704524	1577.073068380044	710105.2478883315	0.11369970135382669	0.029357136674576775	8.998926970546287e-11	10.045809272622126	0.22159256833042484	
MS(ph)TAKRT(ph)LS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	MSTAKRTLSK	10	2	O15042-2;O15042;C9J5L1;E7EW00;H0Y8D9;E7ET15;U3KPT1;C9JDJ7	O15042-2	U2SURP	U2 snRNP-associated SURP motif-containing protein	3	MS(0.957)T(0.378)AKRT(0.666)LS(0.999)K	72.547	0.019459999999999998	35953000.0	855.46	851.03	882.12	945.92	973.9	811.55	927.99	1009.4	875.69	686.81	True	False	817.8550026988818	991.6482424633526	696.9750668830552	862.9926622355431	1101.9849204501609	968.3705518138819	1136.115380094196	973.8988298666336	834.9793630355504	562.4220536750275	1.4541659548283745	1.7631745341130165	1.2392385083920867	1.5344218040464463	1.959355813395784	1.7217862377306687	2.02004059526203	1.7316156496760722	1.4846134812451874	1.0	9.135509356204713	-7.5482682754914325	24.81584398945785	1.7145207668191598	1.4922141943397682	0.0410631010064445	0.2925564468319385	448.4628972903019	438326.78222633625	0.08278011897371529	0.10687263180146093	2.829643508198405e-08	7.5482682754914325	-0.22230657247939156	
MSCFSRPS(ph)MS(ph)PTPLDR	ddPTM_K562_Methotrexat_30min_R1	2	MSCFSRPSMSPTPLDR	16	1	Q9UQ35	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	MSCFS(0.013)RPS(0.984)MS(0.945)PT(0.056)PLDR;MSCFS(0.006)RPS(0.993)MS(0.585)PT(0.417)PLDR	132.15	0.00139	46661000.0	3494.8	2844.3	3447.2	3811.8	3284.9	3028.4	2591.9	2929.6	3459.3999999999996	3559.2	True	False	3341.1727765553646	3314.2722301664044	2723.6798287753	3477.625412201289	3716.921927494336	3613.5954397303462	3173.199553514743	2826.5643074869135	3298.573249078079	2914.594390646844	1.1463594341900345	1.13712983213107	0.9344970392847102	1.1931764582273452	1.2752793113931127	1.2398278989785507	1.0887276678009752	0.96979679798931	1.1317434973674045	1.0	11.50907940948818	-8.996723047251091	24.902376018130756	1.0363145259261286	1.1519770140258232	0.25373560874461565	0.09328354928200133	146.06671122269495	1109991.3242479926	0.04272696351859261	0.028643102851463122	1.0075740012867968e-09	8.996723047251091	0.1156624880996946	
MSCFSRPSMS(ph)PTPLDR	ddPTM_K562_Methotrexat_30min_R1	2	MSCFSRPSMSPTPLDR	16	1	Q9UQ35	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	MSCFSRPS(0.074)MS(0.823)PT(0.103)PLDR;MSCFSRPS(0.063)MS(0.921)PT(0.016)PLDR	153.41	7.959899999999999e-11	40155000.0	7169.4	5817.9	8269.2	7831.900000000001	6329.4	6869.5	6915.799999999999	7835.900000000001	8429.5	9741.4	True	False	6854.241760397168	6779.209087608593	6533.607925304221	7145.28948680919	7161.827041274516	8196.933652498876	8466.844196225651	7560.306955569599	8037.614384894393	7977.138063904016	0.8592356939905711	0.8498297300737508	0.8190416002536465	0.8957209251700329	0.8977940439167369	1.0275531884786373	1.0613886996061308	0.9477467852511481	1.0075812052525488	1.0	12.961655532164627	-8.043340825844899	2.3468965637590657	1.0088853307856056	0.8512260819000028	0.8350918193934396	0.03236967486410755	0.1208737232315853	1.325612370822688	0.012142225644549236	0.012893548112260336	9.05022078444504e-09	8.043340825844899	-0.1576592488856028	
MSDYS(ph)PNSTGSVQNTSR	ddPTM_K562_Methotrexat_30min_R1	2	MSDYSPNSTGSVQNTSR	17	0	H7C1W4;Q93075	H7C1W4	TATDN2	Putative deoxyribonuclease TATDN2	1	MS(0.365)DY(0.008)S(0.623)PNST(0.003)GSVQNTSR;MS(0.002)DY(0.004)S(0.744)PNS(0.066)T(0.066)GS(0.117)VQNTSR	171.15	7.7729e-08	25898200.0	5295.5	4718.5	6108.4	5990.9	4914.0	4839.9	4316.0	5134.700000000001	5280.5	6583.1	True	False	5062.716160652664	5498.151924213403	4826.330316225066	5465.687098472302	5560.277132243652	5775.142176974934	5283.972866611223	4954.109690624333	5035.010707566857	5390.836798456743	0.9391336354500639	1.0199069513266255	0.8952840712237327	1.0138847275133587	1.0314311748104517	1.0712886315957864	0.9801767451249661	0.9189871398152075	0.9339942750647264	1.0	12.396293518916485	-9.013034389727608	24.067546808194155	0.9458107973616908	0.9968649882863022	0.13200748709450827	0.05000150379339926	710.5414330248832	1311985.4665449911	0.023452967802396748	0.014373549291336449	9.704331201902937e-10	9.013034389727608	0.05105419092461139	
MSDYSPNS(ph)TGSVQNTSR	ddPTM_K562_Methotrexat_30min_R1	1	MSDYSPNSTGSVQNTSR	17	0	H7C1W4;Q93075	H7C1W4	TATDN2	Putative deoxyribonuclease TATDN2	1	MS(0.001)DYS(0.419)PNS(0.437)T(0.137)GS(0.004)VQNTSR	134.08	1.2249e-05	7193900.0	1941.5	1768.8	2687.7	2717.8	1755.5	1808.8	1692.5	2352.7	2162.9	1999.5	True	False	1856.1539846864591	2061.064135540672	2123.5884995936917	2479.534693656715	1986.3790202795549	2158.3250004570887	2072.0862086977513	2269.9542074769465	2062.347251092957	1637.371174448854	1.1336183350798565	1.258764150550308	1.2969499724511155	1.5143387964499477	1.2131513314005777	1.3181647717620228	1.2654957171792305	1.3863406434042194	1.2595477942178577	1.0	10.677165687009884	-10.034624539536738	22.62445880391583	0.9999999975261247	1.3022882654815673	0.46220408834755744	0.09589252805869587	1335.4280317288592	872598.2176943638	0.09285274402388785	0.023974475445112234	9.233693623919233e-11	10.034624539536738	0.3022882679554426	
MSDYSPNST(ph)GSVQNTSR	ddPTM_K562_Methotrexat_30min_R1	1	MSDYSPNSTGSVQNTSR	17	0	H7C1W4;Q93075	H7C1W4	TATDN2	Putative deoxyribonuclease TATDN2	1	MS(0.007)DY(0.026)S(0.257)PNS(0.145)T(0.283)GS(0.283)VQNTSR	116.0	0.010319	15297000.0	3448.5	3559.5	4922.5	4360.8	3693.5	3615.1	3688.3	3963.2	4813.4	4903.7	True	False	3296.908069117309	4147.646873844993	3889.334519942684	3978.4954345787805	4179.259989406171	4313.666911296119	4515.495163095968	3823.8120096368543	4589.62608461364	4015.5924121754665	0.8210265711034136	1.03288542464348	0.9685580907439802	0.9907617671842874	1.0407580153639242	1.074229271431253	1.1244904112789864	0.9522410686012044	1.1429511796809049	1.0	11.971397125968995	-5.195731651140569	0.7750717044176032	1.0508379513380675	2.017101385644338e-25	0.5262399054162741	0.06054885763899077	9.487818621400363	1.2554013849726333	0.021568428556558616	12.639269038964047	6.371891159541374e-06	5.195731651140569	-1.0508379513380675	
MSGGS(ph)TMSSGGGNTNNSNSK	ddPTM_K562_Methotrexat_30min_R1	1	MSGGSTMSSGGGNTNNSNSK	20	0	A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70	A0A6E1WJ75	LDB1	LIM domain-binding protein 1	1	MS(0.085)GGS(0.802)T(0.113)MSSGGGNTNNSNSK	173.06	2.0269999999999997e-12	2506300.0	1414.7	833.87	2048.0	1779.8	1087.1	1162.4	789.04	1184.6	1523.4	1869.6	True	False	1352.5114819139508	971.6528441334815	1618.1527875759502	1623.7676973177645	1230.0727046117374	1387.0173488120975	966.0023055307975	1142.9369465623283	1452.5774665102465	1530.9973232055909	0.8834185804336171	0.6346535225150113	1.0569272480423897	1.0605947330580119	0.8034453659502293	0.9059567432214517	0.6309627658317448	0.7465309894659093	0.9487785801407219	1.0	10.580256045095219														
MSGGST(ph)MSSGGGNTNNSNSK	ddPTM_K562_Methotrexat_30min_R1	1	MSGGSTMSSGGGNTNNSNSK	20	0	A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70	A0A6E1WJ75	LDB1	LIM domain-binding protein 1	1	MS(0.101)GGS(0.083)T(0.618)MS(0.198)SGGGNTNNSNSK	154.52	2.9122000000000006e-14	3438400.0	1214.1	914.96	1661.9	1306.4	665.76	1062.5	778.94	1024.1	1207.0	1324.7	True	False	1160.729617722292	1066.1415883391533	1313.0899012072612	1191.86994031685	753.3191093940848	1267.8130876745117	953.6371234286725	988.0818225345946	1150.8868334500903	1084.783993394547	1.070009905004307	0.9828146385189025	1.2104620912577173	1.0987163781677913	0.6944415791357413	1.168723999795778	0.879103240124806	0.9108558280277087	1.060936408038887	1.0	10.083192080619298														
MSGGSTMS(ph)SGGGNTNNSNSK	ddPTM_K562_Methotrexat_30min_R1	2	MSGGSTMSSGGGNTNNSNSK	20	0	A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70	A0A6E1WJ75	LDB1	LIM domain-binding protein 1	1	MS(0.104)GGS(0.144)T(0.144)MS(0.547)S(0.062)GGGNTNNSNSK;MS(0.017)GGS(0.02)T(0.049)MS(0.805)S(0.108)GGGNTNNSNSK	97.551	0.00019564	10548000.0	1648.73	1032.72	2055.89	1829.6599999999999	1325.4	885.94	922.56	1308.75	1470.57	1797.6899999999998	True	False	1576.2538033335595	1203.3594267613994	1624.3867843991793	1669.2565485304096	1499.7133315172432	1057.1353664888068	1129.4675643699848	1262.7205206934384	1402.2035216791196	1472.1109210277377	1.0707439098632021	0.8174380133810076	1.10344048209705	1.1339203620370106	1.018750224657144	0.7181085007852395	0.767243519653709	0.8577618049405437	0.9525121386234856	1.0	10.523670664744298	-8.165949283379227	9.00289182285797	0.8446479577242337	1.0277524420886333	0.3697036545576501	0.11002941298434148	0.40240547740835014	35.100952532301505	0.03764650562092421	0.037663642554319234	6.824183818534365e-09	8.165949283379227	0.18310448436439952	
MSGGSTMSS(ph)GGGNTNNSNSK	ddPTM_K562_Methotrexat_30min_R1	1	MSGGSTMSSGGGNTNNSNSK	20	0	A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70	A0A6E1WJ75	LDB1	LIM domain-binding protein 1	1	MS(0.001)GGS(0.012)T(0.121)MS(0.336)S(0.522)GGGNT(0.007)NNSNSK	90.926	0.00081553	6988700.0	749.82	596.05	1332.5	918.92	646.62	733.16	462.54	687.18	673.21	1210.9	True	False	716.8588106091171	694.5371313823036	1052.826459689919	838.3597103153393	731.6618639095218	874.8327937500659	566.2763692591186	663.0114899026685	641.9126140405423	991.5942761390935	0.7229356076966316	0.7004247080636427	1.061751247485253	0.8454664679788252	0.7378641461690827	0.8822487329760976	0.5710766821526968	0.6686318243830465	0.6473540937931952	1.0	9.953606133436574	-8.741833054057743	24.998042295465293	0.6941515682240307	0.8271626977754801	0.09920866226394942	0.143119996896855	441.4451727163212	562842.1386091997	0.054108709726989695	0.04185229650592072	1.8120365187086822e-09	8.741833054057743	0.13301112955144945	
MSMQELNPETS(ph)TDCDAR	ddPTM_K562_Methotrexat_30min_R1	4	MSMQELNPETSTDCDAR	17	0	H0YNU5;A0A3B3IT82;P54132	H0YNU5	BLM	Bloom syndrome protein	1	MSMQELNPET(0.173)S(0.655)T(0.173)DCDAR;MSMQELNPET(0.187)S(0.683)T(0.13)DCDAR;MSMQELNPET(0.196)S(0.608)T(0.196)DCDAR;MSMQELNPET(0.199)S(0.602)T(0.199)DCDAR	95.073	0.0018562000000000001	48642000.0	9284.2	7242.200000000001	8786.9	9889.8	7373.5	6893.0	7530.150000000001	8479.800000000001	10522.800000000001	10745.6	True	False	8876.077684587186	8438.850453648043	6942.649770093321	9022.776588905057	8343.244492185302	8224.974694908626	9218.977822407911	8181.560627603603	10033.597324795866	8799.467713007058	1.008706205202263	0.9590182871145759	0.7889851973467605	1.025377543640272	0.9481533161207714	0.9347127534487981	1.0476744870352497	0.9297790382831809	1.1402504846929051	1.0	13.103200541249423	-8.933352086114608	1.0190276767973516	1.0422072458938993	0.9372751830832053	0.20753914926657813	0.07762002124537654	0.8799401973914341	1.7273597861168193	0.06023036477125808	0.029718380378550326	1.1658640582290855e-09	8.933352086114608	-0.104932062810694	
MSPAS(ph)S(ph)TTSLPVS(ph)PLTEEPVPFKDIMK	ddPTM_K562_Methotrexat_30min_R1	1	MSPASSTTSLPVSPLTEEPVPFKDIMK	27	1	D6RAM6;D6RAM2	D6RAM6	CCSER1		3	MS(0.397)PAS(0.471)S(0.479)T(0.221)T(0.221)S(0.22)LPVS(0.942)PLT(0.05)EEPVPFKDIMK	45.22	0.019139	26919000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	57.35	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	46.963359267137676	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	5.553463702328218														
MSPMGT(ph)ASGSNSPTSDSASVQR	ddPTM_K562_Methotrexat_30min_R1	2	MSPMGTASGSNSPTSDSASVQR	22	0	Q5QPB1;O76080	Q5QPB1	ZFAND5	AN1-type zinc finger protein 5	1	MS(0.35)PMGT(0.629)AS(0.018)GSNS(0.001)PT(0.001)SDSASVQR;MS(0.316)PMGT(0.683)AS(0.001)GSNSPTSDSASVQR	141.65	1.9271e-13	85650000.0	6478.1	5325.799999999999	8023.5	6786.9	5958.2	5614.3	5504.2	6928.700000000001	6496.3	7147.6	True	False	6193.330480657919	6205.7979268784	6339.476997615061	6191.903014342025	6741.807734907229	6699.184017064479	6738.656963021666	6685.013693775454	6194.288430937709	5853.1003783399	1.0581281851199889	1.0602582436213976	1.0830972626191506	1.0578843030363712	1.151835317886585	1.1445530717114665	1.1512970096940205	1.1421320773028512	1.058291850565286	1.0	12.514985305187592	-7.7439259842297945	24.982664378476827	1.1191155094669376	1.0658185196522483	0.14716934573218177	0.04650016932144977	356.121988092637	508001.5717630506	0.013246697453391265	0.017062251193421255	1.803325051048674e-08	7.7439259842297945	-0.05329698981468933	
MSPMGTASGS(ph)NSPTSDSASVQR	ddPTM_K562_Methotrexat_30min_R1	1	MSPMGTASGSNSPTSDSASVQR	22	0	Q5QPB1;O76080	Q5QPB1	ZFAND5	AN1-type zinc finger protein 5	1	MSPMGT(0.022)AS(0.263)GS(0.558)NS(0.068)PT(0.068)S(0.019)DSASVQR	128.29	2.5614999999999997e-14	0.0	160.58	280.52	287.08	388.64	241.99	344.2	153.89	271.46	264.15	368.29	True	False	153.52109547306293	326.8711619752767	226.82583118032417	354.56853460252637	273.8159265835656	410.7117786141806	188.40374987089936	261.9125979350071	251.86972415562656	301.5891121969334	0.5090405762818647	1.0838294512496676	0.752102188066425	1.1756675564965295	0.9079105163609743	1.3618256163902618	0.6247034201548841	0.868441821480551	0.8351419662363647	1.0	8.23644053594422	-6.250590195566857	24.126265345458375	0.9537349590122963	0.5090401558651723	0.30679584994026055	0.2017953788513429	1223.1496340029876	2719938.826395725	0.048991259411150734	0.6823927195394461	5.61577636133692e-07	6.250590195566857	-0.44469480314712406	
MSQPGS(ph)PSPK	ddPTM_K562_Methotrexat_30min_R1	2	MSQPGSPSPK	10	0	Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;F5GWX5;A0A2R8YFD8;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8YDJ9;A0A2R8Y425;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y4X2;A0A2R8YDW2;A0A2R8Y7I0;A0A2R8Y7M9;A0A2R8Y5M9;A0A2R8YE38	Q14839-2	CHD4	Chromodomain-helicase-DNA-binding protein 4	1	MS(0.001)QPGS(0.499)PS(0.499)PK;MSQPGS(0.5)PS(0.5)PK	124.6	0.0022535999999999997	87008000.0	22533.0	16056.9	32282.0	23788.0	17035.6	16131.4	15399.3	21460.0	21131.0	25935.0	True	False	21542.476300252376	18710.029804366255	25506.449359632235	21702.542973252603	19276.079998789155	19248.564745894237	18852.98502428319	20705.2396363562	20148.624422231864	21237.92018471171	1.0143402043557872	0.8809727902563087	1.2009862141770953	1.021877038076231	0.9076255975698222	0.9063300256562068	0.8877039211143972	0.9749184221560939	0.9487098664555682	1.0	14.374354870450556	-7.718197453561758	7.9384827044404	0.9322810113505644	1.031638771041166	0.24614048977350844	0.07854833582855948	0.3422970395499328	54.21733769089053	0.023746471303669383	0.030468964796623033	1.9133857994379833e-08	7.718197453561758	0.09935775969060168	
MSQPGSPS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	4	MSQPGSPSPK	10	0	Q14839-2;Q14839;A0A0C4DGG9;A0A2R8Y521;A0A2R8Y212;F5GWX5;A0A2R8YFD8;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8YDJ9;A0A2R8Y425;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y4X2;A0A2R8YDW2;A0A2R8Y7I0;A0A2R8Y7M9;A0A2R8Y5M9;A0A2R8YE38	Q14839-2	CHD4	Chromodomain-helicase-DNA-binding protein 4	1	MS(0.004)QPGS(0.441)PS(0.556)PK;MS(0.041)QPGS(0.326)PS(0.634)PK;MS(0.054)QPGS(0.325)PS(0.621)PK;MSQPGS(0.011)PS(0.989)PK	137.4	0.00012861	387034000.0	33749.3	25428.199999999997	47984.4	37250.7	25914.399999999998	22247.2	22757.199999999997	30727.199999999997	30954.0	37443.4	True	False	32265.721182270805	29629.777844502114	37913.130185624716	33984.9889664428	29322.597825766145	26546.156540341093	27861.08139945436	29646.50695965723	29514.955296283413	30662.037426035622	1.0523019306888417	0.9663342795134351	1.2364843750869625	1.108373474803263	0.9563160274818483	0.8657662298005132	0.9086506878958107	0.9668798764978321	0.9625895006970997	1.0	14.904165943694794	-7.807801635066199	5.775883995202766	0.9347323710324676	1.0924715140031578	0.5085316971334496	0.07088928974966281	0.1601196233533833	12.332127515853559	0.023239194385371097	0.026924100670415573	1.5566764845658117e-08	7.807801635066199	0.15773914297069014	
MSRRSADAS(ph)QRSLAYNR	ddPTM_K562_Methotrexat_30min_R1	1	MSRRSADASQRSLAYNR	17	3	A0A087WX11;J3KNG8;Q8TF40-3;Q8TF40;Q8TF40-2	A0A087WX11	FNIP1	Folliculin-interacting protein 1	1	MSRRSADAS(0.465)QRS(0.465)LAY(0.069)NR	60.657	0.022288	39057000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
MSS(ph)PEDDSDTKR	ddPTM_K562_Methotrexat_30min_R1	2	MSSPEDDSDTKR	12	1	Q15424-2;Q15424;Q15424-4;Q15424-3	Q15424-2	SAFB	Scaffold attachment factor B1	1	MS(0.004)S(0.981)PEDDS(0.015)DTKR;MS(0.307)S(0.692)PEDDS(0.001)DTKR	107.09	0.007830199999999999	5133000.0	5719.3	4318.7	7793.7	5927.3	4308.3	4179.6	3377.79	5101.0	5478.2	7209.1	True	False	5467.886420096453	5032.291769651459	6157.908877212245	5407.662811726931	4874.916965576993	4987.248547053544	4135.345391360225	4921.594938725675	5223.519677718544	5903.462132392714	0.9262169041609962	0.8524306003487204	1.043101274999862	0.9160154991178318	0.8257725477441413	0.8448006331213948	0.7004949466295876	0.8336794288423628	0.8848231022024724	1.0	12.52734556732758	-7.695515989394331	4.933076534611622	0.8322909886663312	0.9386151770858705	0.1981622098539657	0.08191863681207669	0.2822934947888226	13.215575098155867	0.0244782713279744	0.03141565180137806	2.0159697474587183e-08	7.695515989394331	0.10632418841953928	
MSS(ph)PPSSPQK	ddPTM_K562_Methotrexat_30min_R1	1	MSSPPSSPQK	10	0	A0A087X1M6;G5E9X3;Q9Y2H6-2;Q9Y2H6	A0A087X1M6	FNDC3A	Fibronectin type-III domain-containing protein 3A	1	MS(0.311)S(0.679)PPS(0.002)S(0.009)PQK	84.31	0.018737	6316000.0	3676.0	2311.0	4667.5	3574.8	2644.0	2370.3	2228.9	3112.3	3225.4	4110.2	True	False	3514.4074415181194	2692.8534697164732	3687.855535161497	3261.4028342350525	2991.732343844572	2828.3269286728414	2728.7875631116212	3002.838644931567	3075.4518580032486	3365.802951347676	1.044151274545333	0.8000627216273157	1.0956837308865246	0.9689821066111962	0.8888614060566662	0.8403126889945748	0.8107389536927608	0.8921611539169942	0.9137349697705358	1.0	11.716735002198968	-7.775628686831802	5.436517413521082	0.8783935960276231	0.9735292769088313	0.18998552513415812	0.08501876732976311	0.26919317466337594	23.70391954353359	0.025633023565527994	0.030663501407702166	1.6763755313231565e-08	7.775628686831802	0.09513568088120816	
MT(ph)GY(ph)EARLITFGTWMY(ph)SVNK	ddPTM_K562_Methotrexat_30min_R1	1	MTGYEARLITFGTWMYSVNK	20	1	Q96P09	Q96P09	BIRC8	Baculoviral IAP repeat-containing protein 8	3	MT(0.98)GY(0.957)EARLIT(0.046)FGT(0.016)WMY(0.717)S(0.284)VNK	45.395	0.02798	2673900.0	617.35	592.12	854.48	632.21	659.11	702.12	396.16	795.93	531.16	804.72	True	False	590.2120331940176	689.9577656808814	675.1363251601063	576.7851308693473	745.7945178333567	837.7947530522621	485.0089645126746	767.9366907625808	506.46648753550085	658.9774101037672	0.8956483547760442	1.0470127732788834	1.0245211972498338	0.8752729942268017	1.1317451955081719	1.2713558009831278	0.7360024138555853	1.1653460027433356	0.7685642630082709	1.0	9.364085199939971	-8.774895698078108	24.999312631510836	0.9312571447637353	1.037055556739759	0.13225121591533162	0.15310299223704396	590.1529029673566	1096382.9645925427	0.06256995527110928	0.042443543742515376	1.6792072549151326e-09	8.774895698078108	0.10579841197602369	
MT(ph)KDMFPGPYPR	ddPTM_K562_Methotrexat_30min_R1	1	MTKDMFPGPYPR	12	1	O95169-3	O95169-3			1	MT(0.99)KDMFPGPY(0.01)PR	55.31399999999999	0.033652999999999995	0.0	969.36	1049.0	913.71	1163.2	1254.7	1306.8	1497.3	1112.0	1295.8	1202.9	True	False	926.7480950788911	1222.3294200487148	721.9347575859481	1061.2240619845065	1419.7150422926559	1559.3206051511083	1833.1076397537033	1072.8903297123995	1235.5585408323325	985.043153660679	0.9408197921429654	1.2408892092759771	0.7328965791021936	1.0773376354535529	1.4412719250081807	1.5829972518018764	1.8609414551447763	1.089181043211414	1.254319200372768	1.0	9.944043118616348	-7.687849018834746	4.772072805421896	1.411132605690563	0.9860951465359742	0.3328855090261774	0.2575333034574772	0.23479717271652853	9.929290406890706	0.07992352160229685	0.10282454372612901	2.0518753831278975e-08	7.687849018834746	-0.4250374591545889	
MT(ph)LETKQIVEILTAY(ph)ASAVGIGT(ph)TQVQPE	ddPTM_K562_Methotrexat_30min_R1	1	MTLETKQIVEILTAYASAVGIGTTQVQPE	29	1	A0A087WYS0;H7C463;C9J406;B9A067;Q16891-3;Q16891-2;Q16891-4;Q16891	A0A087WYS0	IMMT	MICOS complex subunit MIC60	3	MT(0.5)LET(0.5)KQIVEILT(0.174)AY(0.699)AS(0.222)AVGIGT(0.756)T(0.151)QVQPE	47.018	0.0077155	14558000.0	797.43	799.49	983.66	901.5	501.69	757.88	784.56	932.52	514.66	877.47	True	False	762.3759320157216	931.5921334935626	777.2032085092575	822.4668946690447	567.6710285867557	904.3295838934207	960.5175514894586	899.722743042632	490.73356893407083	718.5516801418538	1.0609897006506424	1.2964859163778606	1.081624648565048	1.1446175931377356	0.7900211554368479	1.2585449437887213	1.336741083536033	1.2521336570600072	0.6829481893872853	1.0	9.488948112641152	-9.754791261562506	24.99965939137884	0.841474067753781	1.152383724198268	0.363767773464866	0.1646089569000191	154.8511637830228	582320.5946067108	0.12020701656047988	0.04309099075948046	1.7587687419582163e-10	9.754791261562506	0.310909656444487	
MT(ph)LSEDERKILS(ph)NK	ddPTM_K562_Methotrexat_30min_R1	1	MTLSEDERKILSNK	14	2	Q15911	Q15911	ZFHX3	Zinc finger homeobox protein 3	2	MT(0.855)LS(0.145)EDERKILS(1)NK	73.887	0.033093	3183600.0	614.1	286.89	380.05	424.16	257.97	287.55	432.38	390.9	422.96	558.75	True	False	587.1048993025781	334.29369620378986	300.2826986905468	386.97455135088387	291.89757667987277	343.1149678689937	529.3522215165341	377.15182543577095	403.29668191884826	457.55496060179905	1.2831352511846632	0.730608833885464	0.6562767854065008	0.845744412522412	0.6379508514036315	0.7498879859541066	1.1569150530469687	0.8242765523506118	0.8814169152235011	1.0	8.837801237270435														
MT(ph)PCTTAARGT(ph)PS(ph)ALQDT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	MTPCTTAARGTPSALQDTR	19	1	I3L2V5;K7EIF8;A0A590UJK2	I3L2V5	CACNA1A		4	MT(0.969)PCT(0.038)T(0.086)AARGT(0.932)PS(0.98)ALQDT(0.995)R	44.238	0.033237	0.0	3111.7	1804.9	4124.5	2627.8	1929.5	1658.7	1772.6	2442.1	2668.2	3449.2	True	False	2974.9133938443756	2103.12904694559	3258.823814627446	2397.4248539227005	2183.2630701392213	1979.2202997889055	2170.1506726957978	2356.209958804543	2544.155964384033	2824.516456568635	1.05324696796366	0.7445979088047435	1.1537634369411427	0.8487912500376128	0.7729687908391794	0.7007288965111438	0.7683264396102001	0.8341994090085726	0.9007403580416032	1.0	11.463788190979143	-7.502499741076567	24.630722621958256	0.8116320941425599	0.9668314747622778	0.232286908726421	0.12304500726261577	880.555938353611	1064268.6088068967	0.03362398215826239	0.04916697327015839	3.144128294766265e-08	7.502499741076567	0.15519938061971794	
MT(ph)S(ph)NFPVDLSDYPK	ddPTM_K562_Methotrexat_30min_R1	1	MTSNFPVDLSDYPK	14	0	P04114	P04114	APOB	Apolipoprotein B-100;Apolipoprotein B-48	2	MT(1)S(0.547)NFPVDLS(0.443)DY(0.01)PK	106.55	0.033325	17723000.0	992.21	927.44	1217.9	1160.8	824.52	993.0	907.12	1041.9	1033.2	1023.7	True	False	948.593636438708	1080.6836962154246	962.2794335882573	1059.0344662582663	932.9588321281111	1184.8831962925083	1110.5647513346566	1005.2557864454578	985.166757515023	838.2980101441821	1.1315709031392736	1.2891402378845604	1.1478965975629016	1.2633150185768889	1.112920251316889	1.413439113482705	1.3247851454921697	1.199162796858554	1.175198730753972	1.0	9.711319394711145	-10.167760070583926	1.9303005171008918	1.0007531487364614	1.2406412195581913	0.39346993565119825	0.08823108999491791	0.6544273010479438	4.64148482733346	0.08510638904111492	0.0237863623291499	6.79578967696443e-11	10.167760070583926	0.23988807082172992	
MT(ph)S(ph)PFISLRPT(ph)NPAMQALS(ph)SQK	ddPTM_K562_Methotrexat_30min_R1	1	MTSPFISLRPTNPAMQALSSQK	22	1	Q9H0K1	Q9H0K1	SIK2	Serine/threonine-protein kinase SIK2	4	MT(0.937)S(0.533)PFIS(0.53)LRPT(0.98)NPAMQALS(0.535)S(0.486)QK	41.818000000000005	0.03182	64485000.0	1275.1	844.0	1205.0	1194.5	1028.5	1439.6	754.18	1802.8	1266.6	1051.8	True	False	1219.0481307616299	983.4566544529222	952.0869672993266	1089.780039580892	1163.7657774750908	1717.7823256623321	923.3240631466293	1739.3945021632323	1207.7160424588922	861.3088278496145	1.4153438248220034	1.1418165269573144	1.1053955753319669	1.2652605016271454	1.3511597000353577	1.994386067017368	1.0720011606659658	2.019478317093172	1.402187001234081	1.0	9.750386807793086	-8.009236651916524	22.512092548583656	1.550065685912434	1.2279423236827673	0.12248867128028396	0.3208897320502264	197.1278642974838	480456.45380449126	0.09562136886306291	0.10267661726576784	9.78956395762321e-09	8.009236651916524	-0.32212336222966664	
MTDQEAIQDLWQWR	ddPTM_K562_Methotrexat_30min_R1	2	MTDQEAIQDLWQWR	14	0	P06748;P06748-2	P06748	NPM1	Nucleophosmin	0	;	133.88	0.00043924	134624000.0	2089.59	1679.18	1650.24	2216.54	1759.7400000000002	1774.44	1950.0300000000002	2891.6000000000004	3049.4	3497.2	False	True	1997.7341256044201	1956.6359538202107	1303.8771758639336	2022.2193796003587	1991.1766545979756	2117.3254167465047	2387.373866792838	2789.900789025519	2907.634059587988	2863.8231914391267	0.6975759298186701	0.6832251235583309	0.4552924844528234	0.706125778171436	0.6952861686958303	0.7393352435568858	0.8336317248667632	0.9741875117728688	1.0152980352557468	1.0	11.483726709977955	-8.883258537698001	1.0326284024519035	1.0253145524922362	0.6295644078096594	0.8382229834045286	0.06733132422305826	0.20908868118177013	0.4275984125488973	0.05363776197718477	0.02748487784310255	1.3084027923232914e-09	8.883258537698001	-0.39575014468257685	
MTEDRAEPKEAVERQLMT(ph)	ddPTM_K562_Methotrexat_30min_R1	1	MTEDRAEPKEAVERQLMT	18	3	B8ZZI7;Q6ZRH7	B8ZZI7	CATSPERG	Cation channel sperm-associated protein subunit gamma	1	MT(0.001)EDRAEPKEAVERQLMT(0.999)	42.711000000000006	0.033566000000000006	175960000.0	50.103	0.0	117.97	0.0	0.0	0.0	126.39	182.59	0.0	0.0	True	False	47.90053211163827	0.0	93.20970915543693	0.0	0.0	0.0	154.7361748403598	176.16820620700284	0.0	0.0											0.0														
MTEEEVEMLVAGHEDS(ph)NGCINYEELVR	ddPTM_K562_Methotrexat_30min_R1	4	MTEEEVEMLVAGHEDSNGCINYEELVR	27	0	F8VXL3;F8VZU9;P60660-2;G8JLA2;F8W180	F8VXL3	MYL6		1	MTEEEVEMLVAGHEDS(1)NGCINYEELVR;MTEEEVEMLVAGHEDS(0.999)NGCINY(0.001)EELVR;MTEEEVEMLVAGHEDS(1)NGCINYEELVR;MTEEEVEMLVAGHEDS(0.974)NGCINY(0.026)EELVR	160.07	3.7221999999999994e-36	41625300.0	3389.19	2916.08	3806.7900000000004	3593.26	2994.42	3107.74	3369.0299999999997	4187.870000000001	3521.17	5308.24	True	False	3240.20526570152	3397.912655115018	3007.7968018634056	3278.2444746960505	3388.2387159814884	3708.2667718490234	4124.620738368676	4040.5802383926903	3357.4715752605234	4346.866298102721	0.7454117618284635	0.7816924704121004	0.6919460125047371	0.7541627116819553	0.779466973129667	0.8530896782971155	0.9488722347335485	0.929538651822874	0.7723889682841086	1.0	12.08576000621997	-8.29166697702281	2.2582231162512056	0.9066931745323579	0.7438725190252161	0.63724363398599	0.05822480153264057	0.20592794542448925	2.0637656112939524	0.022575189786256368	0.020397503360583085	5.108966123528945e-09	8.29166697702281	-0.16282065550714175	
MTEFHLQSQMPS(ph)IR	ddPTM_K562_Methotrexat_30min_R1	1	MTEFHLQSQMPSIR	14	0	Q8NGC0	Q8NGC0	OR5AU1	Olfactory receptor 5AU1	1	MTEFHLQS(0.002)QMPS(0.998)IR	80.905	0.028447000000000004	3430000.0	0.0	58.373000000000005	0.0	0.0	0.0	0.0	0.0	0.0	0.0	105.59	True	False	0.0	68.01814607864978	0.0	0.0	0.0	0.0	0.0	0.0	0.0	86.46662781198026	0.0	0.786640439205675	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	6.434071520353173	-12.24082404690678	3.534803441215181	1.001872677877384	0.09254593339312964	0.5765717174331928	0.23458158142178984	166072728.1524786	261719271.5809379	3402190.179844511	0.06231730448522714	5.743491108774079e-13	12.24082404690678	-0.9093267444842544	
MTNHCVFSANEDHETIR	ddPTM_K562_Methotrexat_30min_R1	1	MTNHCVFSANEDHETIR	17	0	B5MCH7;Q9Y6E2;E9PFE3;C9JF98;F8WDX8;E7EMS9;Q75MG1;E7ETZ4;Q9Y6E2-2	B5MCH7	BZW2	Basic leucine zipper and W2 domain-containing protein 2	0		72.187	0.013359999999999999	9527500.0	428.27	413.73	738.58	535.62	381.24	429.58	331.59	677.42	484.52	564.07	False	True	409.44376359601864	482.09185029242565	583.5621512928933	488.66302620369794	431.3797423476942	512.5902552500866	405.95749834096745	653.5947546346888	461.99477095545797	461.9114570499451	0.886411794613154	1.0436888778887736	1.2633636650190179	1.0579149288147236	0.933901369545485	1.1097153955084982	0.8788643194383301	1.4149784437237234	1.0001803676965386	1.0	8.851472520382865	-9.217331759412536	24.999985006423273	1.1556863677261302	1.0357756463778451	0.09894067678105323	0.15191383571187494	958.9574849498431	543533.6777394656	0.06962107137264863	0.04019552376410615	6.062730180962025e-10	9.217331759412536	-0.11991072134828507	
MTPQS(ph)LLQT(ph)T(ph)LFLLS(ph)LLFLVQGSGTR	ddPTM_K562_Methotrexat_30min_R1	1	MTPQSLLQTTLFLLSLLFLVQGSGTR	26	0	H3BPC0	H3BPC0	ADGRG1		4	MT(0.27)PQS(0.752)LLQT(0.98)T(0.992)LFLLS(0.982)LLFLVQGS(0.012)GT(0.012)R	47.56399999999999	0.010354	3900500.0	1033.0	802.46	1299.4	1069.5	939.51	879.45	967.98	840.23	848.1	929.34	True	False	987.5905568792755	935.052875512194	1026.6736973516552	975.7385955058717	1063.0720326646788	1049.3912658403292	1185.074155565879	810.6786346531021	808.6720161135223	761.027520511277	1.2977067586409856	1.2286715661530907	1.3490625104620535	1.2821331281822061	1.3968903935963852	1.3789136891335052	1.5572027602493494	1.0652422058383229	1.06260548313711	1.0	9.571804815628703	-9.374301266834333	7.950438304666756	1.0430145630296461	1.3500181581694197	0.745358739859356	0.08390896614384549	0.15724317450437045	10.012770200959219	0.048929814234364086	0.023333456989249237	4.223755138812347e-10	9.374301266834333	0.3070035951397736	
MTRKS(ph)APTS(ph)GLLNFDTELS(ph)TKEMR	ddPTM_K562_Methotrexat_30min_R1	1	MTRKSAPTSGLLNFDTELSTKEMR	24	3	Q63HN8-6	Q63HN8-6			3	MT(0.445)RKS(0.504)APT(0.3)S(0.751)GLLNFDT(0.004)ELS(0.529)T(0.466)KEMR	52.81399999999999	0.01172	30288000.0	473.41	384.37	318.14	406.64	410.77	587.19	334.74	417.36	422.87	459.89	True	False	452.5994632451283	447.88060932709664	251.36676164033838	370.9905025493293	464.79345494744075	700.656157130915	409.81396602628377	402.6812122381003	403.2108659992039	376.59946457478566	1.2018059126986635	1.1892757464028627	0.6674644689794073	0.9851062931494355	1.2341851188562734	1.8604810230466424	1.0881958275989592	1.0692559340007646	1.0706623453500257	1.0	8.556887138596089	-7.773309849409886	9.03928406135143	1.2495719119656468	0.9989853176257149	0.12263154816223187	0.26715522996164925	0.33361868871322253	198.80253378110442	0.08749934266477633	0.10289203822886592	1.6853501754606475e-08	7.773309849409886	-0.2505865943399319	
MTSGDVLSNR	ddPTM_K562_Methotrexat_30min_R1	1	MTSGDVLSNR	10	0	H0YBS3;Q9NX62	H0YBS3	IMPAD1	Inositol monophosphatase 3	0		90.709	0.031291	17995000.0	2082.4	1652.9	2081.9	2289.5	1772.2	1833.9	2026.9	2278.0	1931.2	1939.8	False	True	1990.860189395357	1926.0136305038325	1644.937640846861	2088.7830896780656	2005.2753629959711	2188.2752202223887	2481.483921069113	2197.8814488173075	1841.418933520143	1588.4834229536827	1.2533087601842774	1.2124858230641993	1.0355396959624579	1.3149542887857828	1.2623835628497089	1.3775876969200167	1.5621717452077362	1.3836351182881645	1.1592308153245583	1.0	10.633434319159635	-7.413777429434548	10.780520065609002	1.3243666480436735	1.1716811310758497	0.10896932621119815	0.1503615622350462	0.873984216714278	81.44025049289947	0.042618664541733985	0.06322102192791043	3.85675961200005e-08	7.413777429434548	-0.15268551696782384	
MVCS(ph)PVTVR	ddPTM_K562_Methotrexat_30min_R1	2	MVCSPVTVR	9	0	A8CG34-2;A8CG34;A8MY32;Q96HA1-2;Q96HA1-3;Q96HA1	A8CG34-2;Q96HA1-2	POM121C;POM121	Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121	1	MVCS(0.997)PVT(0.003)VR;MVCS(1)PVTVR	80.688	0.025043	129393000.0	8870.3	7422.0	11786.7	10064.1	8912.5	8461.4	8261.0	8421.2	8540.7	8963.0	True	False	8480.372232997324	8648.359347570602	9312.832744785868	9181.795978523276	10084.649967668201	10096.445797693288	10113.739539174077	8125.021622818401	8143.644721165851	7339.713846754228	1.1554091085918177	1.1782965287393437	1.2688277689332799	1.250974652449653	1.373984078701902	1.3755912026676822	1.3779473900943129	1.106994331449509	1.1095316372268569	1.0	12.841508102510407	-9.394677859111995	5.474146247248131	1.0716216396994416	1.28383552287358	0.6065735380470028	0.07821493610638044	0.1819273554516634	7.266565506154188	0.05040605769821983	0.023382986411880885	4.0301586324227905e-10	9.394677859111995	0.21221388317413847	
MVEPENAVTITPLRPEDDYS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	MVEPENAVTITPLRPEDDYSPR	22	1	A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160-2;Q14160;Q14160-3;A0A669KAX5;H0YDF9	A0A0G2JMS7	SCRIB	Protein scribble homolog	1	MVEPENAVTIT(0.001)PLRPEDDY(0.051)S(0.948)PR;MVEPENAVTIT(0.002)PLRPEDDY(0.285)S(0.713)PR;MVEPENAVT(0.003)IT(0.001)PLRPEDDY(0.395)S(0.601)PR;MVEPENAVT(0.001)IT(0.014)PLRPEDDY(0.107)S(0.878)PR	76.152	0.0022629	146581000.0	3483.12	3673.62	4348.139999999999	3437.8199999999997	3555.45	3241.6600000000003	3456.27	4641.49	4458.52	4528.3	True	False	3330.0062153701288	4280.623264136663	3435.524834848873	3136.4316581598814	4023.053994675556	3868.0649165091386	4231.426529120108	4478.246165878426	4251.244378354509	3708.180989875842	0.8980160958868474	1.1543727978282925	0.9264717240686523	0.8458140707595009	1.08491306267396	1.0431165380195344	1.1411057175129378	1.207666556218543	1.1464500761859657	1.0	11.856495945784102	-8.31970223572786	1.8113721907842752	1.1373558308039566	0.973062177455099	0.3379207164215995	0.09520456758339645	0.3983122820887643	2.5787002961970145	0.04094281444277537	0.035885807368499285	4.789583668359729e-09	8.31970223572786	-0.1642936533488576	
MVEPENAVTITPLRPEDDYS(ph)PRER	ddPTM_K562_Methotrexat_30min_R1	3	MVEPENAVTITPLRPEDDYSPRER	24	2	A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160-2;Q14160;Q14160-3;A0A669KAX5;H0YDF9	A0A0G2JMS7	SCRIB	Protein scribble homolog	1	MVEPENAVT(0.003)IT(0.057)PLRPEDDY(0.425)S(0.515)PRER;MVEPENAVTITPLRPEDDY(0.438)S(0.561)PRER;MVEPENAVTITPLRPEDDY(0.439)S(0.56)PRER	88.57	0.00049931	115508000.0	3003.6800000000003	2884.19	3414.76	3295.5800000000004	2689.2799999999997	2956.01	2757.84	3424.6	3538.15	3604.2000000000003	True	False	2871.64182370488	3360.7533746523377	2698.0485414564714	3006.661618118035	3042.9674575091994	3527.217096749866	3376.355822626297	3304.154876918241	3373.662178766723	2951.4444545879264	0.9729615000007892	1.1386808819756555	0.914145118761236	1.0187085220066654	1.0310095630561515	1.1950816459604785	1.1439672589392151	1.1195043402500893	1.1430546062022182	1.0	11.527205475560018	-8.123722715522682	6.503052507014053	1.128966418224457	1.0147451032434056	0.3606812326956701	0.06985514267675648	0.25378405321787906	12.423202034482854	0.022231744689689616	0.022285473953192237	7.521029367475329e-09	8.123722715522682	-0.11422131498105137	
MVIQGPS(ph)SPQGEAMVTDVLEDQKEGR	ddPTM_K562_Methotrexat_30min_R1	8	MVIQGPSSPQGEAMVTDVLEDQKEGR	26	1	A6NNK5;Q12888;Q12888-3;Q12888-2	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	MVIQGPS(0.498)S(0.498)PQGEAMVT(0.004)DVLEDQKEGR;MVIQGPS(0.496)S(0.496)PQGEAMVT(0.008)DVLEDQKEGR;MVIQGPS(0.499)S(0.499)PQGEAMVT(0.002)DVLEDQKEGR;MVIQGPS(0.611)S(0.389)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.499)S(0.499)PQGEAMVT(0.003)DVLEDQKEGR;MVIQGPS(0.504)S(0.496)PQGEAMVT(0.001)DVLEDQKEGR;MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.589)S(0.411)PQGEAMVTDVLEDQKEGR	98.135	7.609e-07	634887000.0	18687.299999999996	13882.840000000002	22939.100000000002	20097.6	13907.03	13482.449999999999	12638.61	17440.899999999998	17094.8	21749.4	True	False	17865.828667541213	16176.74334206778	18124.496391349363	18335.67461153697	15736.048206435982	16087.742648392681	15473.140016608266	16827.49366140377	16300.066479256495	17810.37290400497	1.0031136778457779	0.9082765099449525	1.017637108949794	1.0294941442474728	0.8835327756050217	0.9032793830372342	0.8687712548190871	0.9448142243905414	0.9152007410013938	1.0	14.12043010267773	-7.768232547223169	24.99999189288074	0.9131829988721942	0.9858198547001308	0.35892375062637305	0.0455228043986688	173.23022559337036	637514.7297565026	0.013976476130986038	0.016202479513584573	1.7051690950582867e-08	7.768232547223169	0.07263685582793655	
MVIQGPSS(ph)PQGEAMVTDVLEDQKEGR	ddPTM_K562_Methotrexat_30min_R1	1	MVIQGPSSPQGEAMVTDVLEDQKEGR	26	1	A6NNK5;Q12888;Q12888-3;Q12888-2	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	MVIQGPS(0.206)S(0.78)PQGEAMVT(0.013)DVLEDQKEGR	74.222	0.00051771	29862000.0	1420.6	1170.9	2131.5	1723.7	930.43	1145.7	1081.3	1344.6	1436.3	2078.4	True	False	1358.1521249784116	1364.371323102994	1684.1272786709656	1572.5858972168955	1052.7978535110824	1367.0903101634713	1323.809050200815	1297.3096558734642	1369.5267264990582	1701.9816198922226	0.7979828390064613	0.8016369314196191	0.9895096744802757	0.9239734899819182	0.618571811355842	0.8032344733840555	0.7778045513115733	0.7622348212876798	0.804665990802993	1.0	10.732999741760274	-6.559206386328616	24.998225601362947	0.8238982631140102	0.7988937556623792	0.008460873793626034	0.1083225169462835	1335.1367367443133	918745.941010284	0.028688467730746032	0.07590297785323823	2.759266280328981e-07	6.559206386328616	-0.025004507451630964	
MVQLS(ph)PPALAAPAAPGR	ddPTM_K562_Methotrexat_30min_R1	6	MVQLSPPALAAPAAPGR	17	0	P17542-2;P17542	P17542-2	TAL1	T-cell acute lymphocytic leukemia protein 1	1	MVQLS(1)PPALAAPAAPGR;MVQLS(1)PPALAAPAAPGR;MVQLS(1)PPALAAPAAPGR;MVQLS(1)PPALAAPAAPGR;MVQLS(1)PPALAAPAAPGR;MVQLS(1)PPALAAPAAPGR	157.47	4.2822e-11	934993000.0	17335.7	16246.8	19507.0	18667.2	16636.600000000002	16037.300000000001	16172.4	18590.6	17312.600000000002	19547.4	True	False	16573.643385181083	18931.307551618167	15412.747278927773	17030.675558697712	18824.604505145464	19136.281252670546	19799.47237905084	17936.758060747616	16507.741004795378	16007.176441821235	1.0353883113251545	1.1826762590157491	0.9628648334667929	1.0639400159420014	1.1760103084740954	1.1954813718848027	1.2369122343976695	1.1205447835187878	1.0312712591626303	1.0	13.966431228151091	-7.743898146924217	23.950841723006818	1.141679904609148	1.0628677502562316	0.11183531837283767	0.0842396957628341	282.9957355136807	386399.8192194057	0.02521974391122062	0.032469634921379886	1.803440643858327e-08	7.743898146924217	-0.07881215435291633	
MVSPLRRY(ph)T(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	MVSPLRRYTR	10	2	Q53ET0;H0YDQ8	Q53ET0	CRTC2	CREB-regulated transcription coactivator 2	2	MVS(0.001)PLRRY(1)T(1)R	57.347	0.028493	19482000.0	152.81	0.0	111.31	56.946999999999996	0.0	64.348	0.0	0.0	137.56	159.1	True	False	146.09265536952762	0.0	87.94755214115186	51.954544925921304	0.0	76.7823402971101	0.0	0.0	131.16486562501606	130.28544828947875	1.1213274950317331	0.0	0.6750374143530049	0.3987747335411127	0.0	0.5893393414628231	0.0	0.0	1.0067499275405136	1.0	7.025532146643441	-9.780314312689347	24.891846167498635	1.0033761109403843	0.3338863054539427	0.35383019739371024	0.3538160113077925	275.1405562854616	362838.4404490509	0.3228673575271829	0.08394155898280925	1.6583862462928008e-10	9.780314312689347	-0.6694898054864415	
MVSQS(ph)QPGS(ph)RS(ph)GSPGR	ddPTM_K562_Methotrexat_30min_R1	1	MVSQSQPGSRSGSPGR	16	1	E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3	E3W994	CLASP2	CLIP-associating protein 2	3	MVS(0.052)QS(0.948)QPGS(0.97)RS(0.982)GS(0.048)PGR	64.53699999999999	0.026113	3026900.0	1009.4	1009.7	583.38	1119.5	729.34	937.32	846.32	830.07	867.25	1229.5	True	False	965.0279846214331	1176.5357630344965	460.93651035940326	1021.3551731358797	825.2609938198183	1118.4438243191275	1036.1288036307728	800.875967611845	826.9317367933637	1006.8256359014082	0.9584857101472652	1.1685596006712198	0.4578116546930473	1.0144310362354483	0.8196662504336855	1.1108614882633454	1.0291045109346362	0.7954465391565273	0.8213256668350662	1.0	9.975598140795837	-5.907033242607144	18.818580513202864	0.9119406528034029	3.5730541573748917	0.004922006284332481	0.1933749070118739	2717.820528127119	553172.2534273776	0.0461050314234436	1691.1635067400143	1.2387017677980512e-06	5.907033242607144	2.661113504571489	
MVY(ph)VIKSEDY(ph)MYRR	ddPTM_K562_Methotrexat_30min_R1	1	MVYVIKSEDYMYRR	14	2	Q96ST3	Q96ST3	SIN3A	Paired amphipathic helix protein Sin3a	2	MVY(0.995)VIKS(0.011)EDY(0.497)MY(0.497)RR	50.222	0.032632	25308000.0	441.6	370.96	539.59	480.78	511.4	560.53	283.63	469.56	520.86	468.79	True	False	422.18779275690986	432.25483475812325	426.3374329336462	438.630763859105	578.6580637829472	668.8444894439476	347.2412474877065	453.0453086508582	496.64533228733546	383.8875883320224	1.0997693220333078	1.1259932540050455	1.1105788410249646	1.1426020980905887	1.5073633047038468	1.7422925610855318	0.9045388755506713	1.1801509671602657	1.2937259431732122	1.0	8.58454010619479	-7.5523518525738185	24.967471331894146	1.2891438136612974	1.1156830044675998	0.09791791886090395	0.2228844257640817	474.33516164106067	401819.3736440593	0.06947148697160731	0.0896885906088411	2.8031616788640242e-08	7.5523518525738185	-0.17346080919369755	
MVYY(ph)LK	ddPTM_K562_Methotrexat_30min_R1	1	MVYYLK	6	0	Q9HC73-3	Q9HC73-3			1	MVY(0.153)Y(0.847)LK	63.67100000000001	0.029593	3578900.0	1588.7	1283.1	1523.2	1714.8	1567.4	1601.1	1089.4	1689.4	1788.3	1602.5	True	False	1518.8626502556676	1495.1104660290814	1203.501135759613	1564.466146398755	1773.54057327609	1910.489914988858	1333.725681391628	1629.9828444389636	1705.1623233295738	1312.2717214575089	1.1574299936667867	1.1393299433203499	0.9171127565127388	1.1921815587560933	1.3515040705946637	1.4558645772438976	1.0163487177109103	1.2421077264612397	1.2993972935999039	1.0	10.357850762705858	-7.507917648493683	24.25411807450196	1.2433488165816897	1.0741868391089293	0.18710418060009826	0.14373464621684923	714.339045110422	1158047.6646803028	0.04127476470423093	0.058868722163032766	3.105148334728893e-08	7.507917648493683	-0.1691619774727604	
MY(ph)FPS(ph)WLS(ph)QLYR	ddPTM_K562_Methotrexat_30min_R1	1	MYFPSWLSQLYR	12	0	A0A3B3IT89;A0A3B3ITS3;A0A3B3IS54;A0A3B3IS01;A0A3B3IT01;A0A3B3ISK7;Q6PI48	A0A3B3IT89	DARS2	Aspartate--tRNA ligase, mitochondrial	3	MY(1)FPS(1)WLS(0.5)QLY(0.5)R	65.565	0.024641	6276700.0	160.49	156.88	149.05	103.53	60.355	144.9	0.0	121.13	138.88	167.45	True	False	153.43505176529996	182.80175349594123	117.76644188876728	94.45368564069459	68.29274039816153	172.8998742626229	0.0	116.86978924286241	132.42349911313042	137.12318237632437	1.11895778019656	1.3331207045228533	0.8588368490862912	0.6888236110322576	0.49803934837755726	1.2609091421763539	0.0	0.8522978187752526	0.9657265592750319	1.0	7.099328687019108	-6.894555382289911	4.492617575143184	0.7282766963021764	1.2224832719384704	0.24786960281924741	0.3224428373977712	0.2640158164520113	9.149876214903012	0.08309045579594002	0.18433219877282456	1.2748075230181288e-07	6.894555382289911	0.494206575636294	
MY(ph)NEIGEAKK	ddPTM_K562_Methotrexat_30min_R1	1	MYNEIGEAKK	10	1	A0A3B3IU69;G3V4H6	A0A3B3IU69	EML1		1	MY(1)NEIGEAKK	72.243	0.024048	4704100.0	2737.9	2714.7	2906.2	3000.7	3337.6	3031.3	3414.7	2973.7	2884.1	2779.6	True	False	2617.545194268893	3163.2580329897487	2296.2283355728655	2737.6332898873006	3776.5529012162037	3617.055823687293	4180.533398428486	2869.113285490794	2750.018820508204	2276.187505125299	1.1499690549987456	1.389717686204247	1.0088045604338132	1.2027274922311815	1.6591572059474569	1.589085176657352	1.8366384091886827	1.2604907456131809	1.2081688412382448	1.0	11.152403691854962	-6.259089261490538	22.99206483185617	1.3756648144994377	1.1499688636709193	0.0426192451525268	0.2618297374552883	243.54376783730797	2382161.261266301	0.06962038661513269	0.4471960612525204	5.506944993334011e-07	6.259089261490538	-0.22569595082851834	
MYAFYS(ph)LLIYIFYS(ph)LFRR	ddPTM_K562_Methotrexat_30min_R1	1	MYAFYSLLIYIFYSLFRR	18	1	A0A2R8Y870;A0A2R8YEU8;Q96AC6	A0A2R8Y870	KIFC2	Kinesin-like protein KIFC2	2	MYAFY(0.005)S(0.53)LLIY(0.458)IFY(0.467)S(0.54)LFRR	53.169	0.02599	2486100.0	1419.6	1748.0	1321.0	1233.7	1487.7	1461.3	1737.4	2000.1	1795.5	1939.3	True	False	1357.196083781044	2036.8272890802232	1043.7401525331209	1125.5434364428177	1683.3586263001396	1743.6755435470716	2127.0561766567066	1929.755349332528	1712.027596901108	1588.0739777987812	0.8546176706844882	1.282577082399811	0.6572364808721582	0.7087474841713142	1.0600001321307662	1.0979813081277037	1.3393936342971913	1.2151545685594252	1.0780527990730873	1.0	10.633062404269872	-7.9779919900805085	5.467836748665304	1.1632586730857863	0.8872018365462229	0.33843605229582074	0.17735165909173167	0.21249722017338257	18.950795627174383	0.05923802566945362	0.06567805934789037	1.051981275883283e-08	7.9779919900805085	-0.2760568365395635	
MYYSRR	ddPTM_K562_Methotrexat_30min_R1	1	MYYSRR	6	1	E9PKT4;Q8N131-2;Q8N131;P15924-2;P15924-3;P15924	E9PKT4	TMEM123;DSP	Porimin;Desmoplakin	0		80.999	0.020729	0.0	309.32	245.35	374.53	336.76	235.41	258.28	186.86	283.26	373.54	345.29	False	True	295.72266316931007	285.88991726306216	295.92127125528344	307.2367736536297	266.37054124979204	308.1889546207746	228.76811164387718	273.29758524670353	356.1742069320184	282.7546350714905	1.0458631848582811	1.0110883494121288	1.0465655892094003	1.086584393482884	0.9420554368010414	1.089951910223694	0.8090693600337848	0.9665538645462137	1.259658243416469	1.0	8.143406863644444	-13.951366316434347	0.001847558268819453	0.14604389792785497	1.8733704852286612	0.0	0.11054055511125434	6855229.746903077	1380.225845504501	657827.9516348093	632787.1675084416	1.118494063965808e-14	13.951366316434347	1.7273265873008063	
NADSEIKHSTPS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	1	NADSEIKHSTPSPTR	15	1	P49792	P49792	RANBP2	E3 SUMO-protein ligase RanBP2	1	NADSEIKHS(0.013)T(0.414)PS(0.572)PT(0.001)R	188.96	2.0295999999999995e-82	0.0	1134.6	857.65	2056.1	1338.5	940.04	995.94	870.8	1122.2	1005.2	1459.1	True	False	1084.7243425316808	999.3620849425922	1624.5527082689994	1221.1557831553137	1063.671736954482	1188.3913096833442	1066.09906678523	1082.7315899309854	958.4684714035049	1194.8428510319195	0.9078385007659079	0.8363962541848065	1.3596371329216752	1.022022086084935	0.890218940537534	0.9946005105667214	0.8922504460435943	0.9061707060438032	0.8021711562953477	1.0	10.222605168185632	-7.706906211282509	6.479082730221307	0.9125298337511552	1.0423239418456764	0.14746382761209964	0.13745096260241957	0.4002904286798557	35.34561656088426	0.042595709939467985	0.054669909433434874	1.9637843230412612e-08	7.706906211282509	0.1297941080945213	
NADSELMPPPPERGDPPRLS(ph)PDPVAGSAVSQELR	ddPTM_K562_Methotrexat_30min_R1	1	NADSELMPPPPERGDPPRLSPDPVAGSAVSQELR	34	2	E9PMR3;E9PMG4;Q9BUR4	E9PMR3	WRAP53	Telomerase Cajal body protein 1	1	NADSELMPPPPERGDPPRLS(0.979)PDPVAGS(0.011)AVS(0.011)QELR	57.144	0.00098034	38711000.0	1648.2	1424.4	1908.0	2000.3	1416.5	1282.2	1292.5	1923.7	1825.5	2095.2	True	False	1575.7471014989562	1659.7578893397413	1507.53687436275	1824.9368046661011	1602.7945783115854	1529.967003309421	1582.3760264353596	1856.0423806364602	1740.632903449163	1715.7389770968934	0.9184072417385949	0.9673720254045434	0.8786516448519281	1.063644778737833	0.9341715725451345	0.8917248041413579	0.9222708393049449	1.08177432896988	1.0145091570947413	1.0	10.744614370662989	-9.251286971294697	24.960466362259996	1.0361063083987698	0.9409343649657109	0.40106173973661163	0.051782932872195285	647.5191507451581	1591980.3425530067	0.024763738748844123	0.014078357879574182	5.606773715498088e-10	9.251286971294697	-0.0951719434330589	
NAEAVLQS(ph)PGLSGK	ddPTM_K562_Methotrexat_30min_R1	3	NAEAVLQSPGLSGK	14	0	Q13045-2;Q13045-3;Q13045	Q13045-2	FLII	Protein flightless-1 homolog	1	NAEAVLQS(0.999)PGLS(0.001)GK;NAEAVLQS(1)PGLSGK;NAEAVLQS(1)PGLSGK	175.7	1.7981e-09	133365000.0	12259.6	8398.2	17249.6	14981.400000000001	9490.0	8368.0	7952.5	11513.4	11609.0	15624.300000000001	True	False	11720.68266323056	9785.859805007736	13629.144689731504	13668.003922124046	10738.101340047268	9984.997569562654	9736.050561104208	11108.467196142752	11069.300123879118	12794.58786743748	0.9160656665667182	0.7648436906602497	1.0652273313482796	1.0682644930603375	0.8392690293194971	0.7804079094235385	0.7609506974337704	0.8682161013106219	0.865154879435448	1.0	13.643246056338281	-7.929561604723716	24.999973498800465	0.8373886972477784	0.9488012994455538	0.18821554672642238	0.09999590134855603	76.69204767293448	27218.008869484343	0.03253741969844722	0.036893966441265545	1.1760841451765574e-08	7.929561604723716	0.11141260219777538	
NAEEESES(ph)EAEEGD	ddPTM_K562_Methotrexat_30min_R1	2	NAEEESESEAEEGD	14	0	H0Y503;Q7L1Q6-2;Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3	H0Y503	BZW1	Basic leucine zipper and W2 domain-containing protein 1	1	NAEEES(0.272)ES(0.728)EAEEGD;NAEEES(0.271)ES(0.729)EAEEGD	201.48	1.5192e-12	36755000.0	6164.4	5828.700000000001	9498.5	6530.9	6106.4	6432.8	5695.8	7575.299999999999	6396.200000000001	8068.8	True	False	5893.420357044143	6791.7936040399845	7504.894654682694	5958.346136876383	6909.498632546323	7675.847558016562	6973.228140325352	7308.872405279085	6098.842058089037	6607.462131729394	0.89193403451283	1.0278974693514202	1.1358210618633409	0.9017601642034511	1.0457114236594007	1.1616937645630572	1.0553565047069327	1.1061542630992134	0.9230233842434094	1.0	12.689880536269717	-7.9811166231946835	24.914973804975826	1.0615333437558148	0.9989642682540955	0.08845215469690648	0.08689284885413454	566.2402628172392	747101.9007932009	0.026948305384993983	0.030552084848800534	1.0444397131192921e-08	7.9811166231946835	-0.0625690755017193	
NALPPVLTTVNGQS(ph)PPEHSAPAK	ddPTM_K562_Methotrexat_30min_R1	2	NALPPVLTTVNGQSPPEHSAPAK	23	0	Q6PKG0;A0A0B4J210;H0YBM7	Q6PKG0	LARP1	La-related protein 1	1	NALPPVLT(0.005)T(0.005)VNGQS(0.99)PPEHSAPAK;NALPPVLTTVNGQS(1)PPEHSAPAK	122.35	2.2510000000000002e-07	628230000.0	12768.5	8965.1	19553.3	14608.9	9616.0	8933.4	8671.3	10842.6	11289.599999999999	15062.7	True	False	12207.21202857021	10446.430394355315	15449.329541654693	13328.160418780488	10880.67254856634	10659.653117582575	10616.059758629734	10461.25961235581	10764.74896016415	12334.699069452747	0.9896643574225282	0.8469140864754628	1.2525096441076071	1.080542001368163	0.882119011359803	0.8642005011684093	0.8606662958580582	0.848116322372504	0.8727208421990104	1.0	13.590434898081353	-7.770543146511585	24.354320830097567	0.8778225539258924	1.0434509977638127	0.35486014241862884	0.1014569865165046	155.38390821007653	415680.4381955328	0.03253862009456388	0.03744214862551037	1.696121086779142e-08	7.770543146511585	0.1656284438379203	
NAPAAVDEGSIS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	NAPAAVDEGSISPR	14	0	A0A494C0S2;A0A090HNM7;A0A1W2PS85;R4GMW8;P28715	A0A494C0S2	ERCC5-201;BIVM-ERCC5;ERCC5	DNA repair protein complementing XP-G cells	1	NAPAAVDEGSIS(1)PR;NAPAAVDEGSIS(1)PR	233.14	1.5807e-47	271780000.0	2439.7	1969.79	2878.8999999999996	2804.5	1908.42	2375.3	1978.63	2362.7	2448.5	2591.0	True	False	2332.4537092142946	2295.2643167948104	2274.65823249629	2558.6338392671496	2159.4106806504756	2834.2931079089576	2422.388144824598	2279.602501808892	2334.669769430443	2121.7447926966643	1.0993092653003882	1.0817815246656544	1.0720696665904281	1.2059102716190548	1.017752317848717	1.3358313015141983	1.1416962837202613	1.0743999512361693	1.1003537171231412	1.0	11.051035421379849	-10.086908044395003	1.4201683994434147	1.0025259223598089	1.134061935196497	0.1822723429323888	0.08358521622431156	0.9175629911921245	4.019680177808931	0.07982641871873931	0.023770858735792176	8.186381046200974e-11	10.086908044395003	0.13153601283668803	
NASVYS(ph)PSGPVNR	ddPTM_K562_Methotrexat_30min_R1	1	NASVYSPSGPVNR	13	0	Q9NS56-2;Q9NS56	Q9NS56-2	TOPORS	E3 ubiquitin-protein ligase Topors	1	NAS(0.016)VY(0.002)S(0.743)PS(0.24)GPVNR	88.78	0.019153	9955900.0	2280.8	1590.0	2837.9	2648.5	2471.7	1984.9	1971.8	2539.4	2529.3	2211.3	True	False	2180.538762952808	1852.7204746210266	2242.263572198139	2416.3101170615246	2796.7718737823857	2368.4538331530725	2414.02634346247	2450.0878626543786	2411.7133950665375	1810.8121420648922	1.2041772375495075	1.0231433905166694	1.2382640474462787	1.334379232903848	1.5444848246893192	1.30795115524921	1.3331180454255873	1.3530326010850093	1.331840746504179	1.0	10.82242117011687	-7.005410977010351	4.015186087603923	1.337911629643909	1.1135551460129978	0.2538213348105993	0.13234156774596897	0.23061653992479542	8.600518390502458	0.034229516329738356	0.07018142928564547	9.876180599209645e-08	7.005410977010351	-0.22435648363091132	
NASVYSPS(ph)GPVNR	ddPTM_K562_Methotrexat_30min_R1	1	NASVYSPSGPVNR	13	0	Q9NS56-2;Q9NS56	Q9NS56-2	TOPORS	E3 ubiquitin-protein ligase Topors	1	NAS(0.002)VYS(0.229)PS(0.769)GPVNR	85.976	0.024865	10662000.0	1412.5	1424.9	1616.1	1936.9	1549.1	1588.3	1579.5	1709.8	1557.4	1895.5	True	False	1350.4081912797453	1660.3405058411943	1276.90269531323	1767.094984231251	1752.8338025149856	1895.2164961444014	1933.7430822086262	1649.665364876134	1484.9968139313744	1552.2065822294587	0.869992568476377	1.0696646469933282	0.8226370831897869	1.1384405944814024	1.12925291168226	1.2209821281792737	1.245802655617631	1.0627872499462627	0.9567005003924478	1.0	10.600104862370399	-7.281584000911844	24.701769892489917	1.121696808006563	0.9356547515080956	0.4020066733173636	0.10302654761781072	681.4109220468679	835558.7694738865	0.02976012183026854	0.044208489013681615	5.228968180914484e-08	7.281584000911844	-0.1860420564984674	
NATDLQNS(ph)SMSEEELTK	ddPTM_K562_Methotrexat_30min_R1	1	NATDLQNSSMSEEELTK	17	0	Q5QNY5;H0YJ60;P40855-5;P40855	Q5QNY5	PEX19	Peroxisomal biogenesis factor 19	1	NAT(0.002)DLQNS(0.333)S(0.333)MS(0.333)EEELTK	83.53	0.009972	27134000.0	1297.0	1041.9	2045.0	1804.9	1305.8	1075.9	1223.7	1471.1	1584.8	1842.1	True	False	1239.9854329839497	1214.056265728079	1615.7824465785245	1646.6672192880283	1477.535587969833	1283.8024480273016	1498.1458750862264	1419.360579172583	1511.1229939119323	1508.4778396860393	0.8220110367958928	0.804822075464338	1.0711343607903572	1.0916084916638553	0.9794877651483125	0.8510582086472682	0.9931507349143669	0.9409223933100639	1.0017535254123744	1.0	10.558877787371504	-6.7453333779272855	24.997272076739193	0.9872704989715754	0.8134164112184404	0.5623553900413061	0.06263880291890203	194.41469087357427	301735.9547068517	0.017593594592806454	0.04623349154746838	1.7974905758305574e-07	6.7453333779272855	-0.17385408775313493	
NATDLQNSS(ph)MSEEELTK	ddPTM_K562_Methotrexat_30min_R1	1	NATDLQNSSMSEEELTK	17	0	Q5QNY5;H0YJ60;P40855-5;P40855	Q5QNY5	PEX19	Peroxisomal biogenesis factor 19	1	NATDLQNS(0.068)S(0.466)MS(0.466)EEELTK	127.05	6.822e-05	21142000.0	1534.8	1187.7	1928.9	1652.2	1112.1	1026.9	1021.3	1459.6	1379.9	2025.8	True	False	1467.3320297176306	1383.9472375518185	1524.05024997815	1507.3541912059845	1258.3606428099645	1225.3338915133704	1250.3525228614565	1408.2650406908442	1315.7487501887147	1658.9079895966445	0.8845168260805142	0.834251957450828	0.9187069201762754	0.908642432647811	0.7585475811204748	0.7386388510982483	0.7537202368682748	0.8489108796403212	0.7931414873157809	1.0	10.696018154901722	-7.753489391926792	24.999178931425842	0.8010073520956569	0.8850938142112189	0.1668320008315023	0.07358875211917915	266.58728161404235	838294.0797528519	0.02118784982820013	0.026856360214356053	1.764048852591985e-08	7.753489391926792	0.08408646211556203	
NAVALSAS(ph)PQLK	ddPTM_K562_Methotrexat_30min_R1	1	NAVALSASPQLK	12	0	Q92547;A0A2R8YD63	Q92547	TOPBP1	DNA topoisomerase 2-binding protein 1	1	NAVALS(0.032)AS(0.968)PQLK	85.271	0.025965	10372000.0	1065.8	755.33	1580.5	866.11	700.23	597.88	490.49	995.98	995.05	1108.1	True	False	1018.948708152886	880.1354440852198	1248.7746488104435	790.1794810225246	792.3225185818017	713.4118483377291	600.4948682447033	960.9508188731623	948.7903426880792	907.4123522914604	1.122916946832128	0.9699398976249782	1.3761931338679174	0.870805294888381	0.873166996879615	0.7862046913249221	0.6617662485288989	1.0590012538913571	1.0455999858191574	1.0	9.825614488507178	-7.310563991055892	24.887194510383786	0.8862404304068403	1.1377092441242551	0.38877194758176625	0.14636527906841643	371.46224395623125	188186.88923777427	0.04277567563258393	0.06344672825303287	4.891431870941777e-08	7.310563991055892	0.2514688137174148	
NCPHIVVGT(ph)PGR	ddPTM_K562_Methotrexat_30min_R1	2	NCPHIVVGTPGR	12	0	A0A140T9L4;F6UJC5;Q5STU3;A0A0G2JJZ9;A0A140T9X3;F6WLT2;A0A140T973;A0A140TA18;F6TRA5;A0A0A0MT12;F6S4E6;A0A140T996;A0A140T9X9;A0A140T9K1;Q13838;Q13838-2	A0A140T9L4	DDX39B	Spliceosome RNA helicase DDX39B	1	NCPHIVVGT(1)PGR;NCPHIVVGT(1)PGR	109.0	0.0061738	35371000.0	2802.0	2309.6	3722.8	3510.2	2486.9	2780.9	2544.5	2876.4	3189.2	3331.5	True	False	2678.827435020066	2691.2221435124015	2941.435155072142	3202.466215937081	2813.970940206908	3318.2695675426367	3115.1688969166494	2775.2353816409604	3040.934788101926	2728.133067104956	0.9819269695164788	0.9864702627457526	1.0781861011616778	1.1738673067496221	1.0314639612476972	1.21631514516406	1.14186838408964	1.0172654021550307	1.114657794654023	1.0	11.413698299467892	-6.813971364935415	4.085236055869542	1.1052248954891477	0.9819759839232998	0.3215470103908521	0.06545369400601991	0.21947215398961287	7.451996638122076	0.01705474043072684	0.04102020329631767	1.5347181706038623e-07	6.813971364935415	-0.12324891156584794	
NCPPS(ph)PLPLISK	ddPTM_K562_Methotrexat_30min_R1	1	NCPPSPLPLISK	12	0	A0A0A0MRP0;Q8IWC1-2;Q8IWC1-3;Q8IWC1-4;Q8IWC1	A0A0A0MRP0	MAP7D3	MAP7 domain-containing protein 3	1	NCPPS(0.967)PLPLIS(0.033)K	81.703	0.032669	6373400.0	1685.6	1320.6	2668.2	1543.8	1460.3	1148.1	1074.8	1758.6	1892.5	2541.6	True	False	1611.5030422804512	1538.8067036380664	2108.181283110424	1408.4574509041263	1652.3550460348806	1369.9540761968062	1315.8512597390513	1696.7490412160307	1804.5180880731525	2081.2916113924534	0.7742802755075258	0.7393518021285607	1.0129197040774025	0.6767227827155952	0.7939084734644176	0.6582230326101498	0.6322282050897726	0.8152384951385304	0.8670183832941458	1.0	11.023263401025886	-9.97703374730647	2.144528734507519	0.9967441113522643	0.7590324799707716	0.35822055153034726	0.10063119507397641	0.3511777330849814	3.6915400255988886	0.09966608946397133	0.02772745184230374	1.0543049673390778e-10	9.97703374730647	-0.23771163138149265	
NCSASTSQAS(ph)PSPCITER	ddPTM_K562_Methotrexat_30min_R1	4	NCSASTSQASPSPCITER	18	0	F5H7X4;Q66PJ3-7	F5H7X4	ARL6IP4	ADP-ribosylation factor-like protein 6-interacting protein 4	1	NCSAST(0.001)S(0.017)QAS(0.782)PS(0.183)PCIT(0.017)ER;NCSASTS(0.016)QAS(0.928)PS(0.056)PCITER;NCSASTSQAS(1)PSPCITER;NCSASTS(0.019)QAS(0.491)PS(0.491)PCITER	300.28	3.8099999999999986e-201	38420600.0	3708.6000000000004	3402.85	5895.52	4384.95	3820.67	3358.0	3587.31	3940.85	4500.03	4610.1	True	False	3545.5743845522547	3965.1131239397214	4658.130919047737	4000.528241574071	4323.155073432919	4006.8859749750686	4391.855584829269	3802.2480718049574	4290.824587514839	3775.166217217637	0.9391836492872107	1.0503148459677834	1.2338876359411957	1.0596959210242483	1.145156219537046	1.061380014660179	1.163354229225473	1.0071736853502784	1.1365922294879114	1.0	11.88232445108031	-6.365811986859279	3.967614282903698	1.1039850156813653	0.9384287094889164	0.3298084260156636	0.06910189928605302	0.23224277251758102	5.809533630411991	0.016230648835631554	0.08490401310003326	4.307130328093651e-07	6.365811986859279	-0.16555630619244888	
NDFAFMLHLIDQYDSLY(ph)S(ph)KR	ddPTM_K562_Methotrexat_30min_R1	1	NDFAFMLHLIDQYDSLYSKR	20	1	Q6NSJ5	Q6NSJ5	LRRC8E	Volume-regulated anion channel subunit LRRC8E	2	NDFAFMLHLIDQY(0.002)DS(0.049)LY(0.972)S(0.976)KR	56.906000000000006	0.020388	0.0	1775.8	1913.3	2317.6	1841.2	1774.2	1693.3	1749.2	1464.2	1505.6	1840.9	True	False	1697.7379582828826	2229.440304460634	1831.1674318779417	1679.7848546474152	2007.5383980518282	2020.5062601028242	2141.502627033447	1412.7032560835396	1435.6049846250664	1507.4951713142766	1.1261979411866023	1.4789037781905099	1.2147086549414805	1.114288713232117	1.3317046954794554	1.3403069532496679	1.4205701403119089	0.9371195894789536	0.9523114978693203	1.0	10.557937665671624	-9.273264219094848	24.872332103691036	0.9585366122275226	1.290767515989489	0.6458921701009148	0.11072647473756926	451.4482000163035	949568.9040889682	0.06049304028980636	0.02943597522204378	5.330105201805733e-10	9.273264219094848	0.3322309037619663	
NDKS(ph)EEEQSSSSVK	ddPTM_K562_Methotrexat_30min_R1	1	NDKSEEEQSSSSVK	14	1	G3V2D6;G3V4C1;P07910-4;P07910-2;G3V4W0;B4DY08;B2R5W2;P07910-3;G3V5V7;G3V2Q1;P07910	G3V2D6;G3V2Q1	HNRNPC	Heterogeneous nuclear ribonucleoproteins C1/C2	1	NDKS(0.994)EEEQS(0.005)S(0.001)SSVK	73.057	0.032462	37024000.0	4394.2	3135.7	8053.5	3945.8	2792.9	2542.2	2404.3	4346.6	3660.7	5466.7	True	False	4201.036229466514	3653.8211272133035	6363.1804075893115	3599.877840249711	3160.215303753215	3033.444170810489	2943.5254780336827	4193.727614323665	3490.5148560155303	4476.627656593925	0.9384377151131892	0.8161994714551132	1.4214227529547954	0.8041494884988277	0.7059365991938868	0.6776181544476512	0.6575318976323542	0.9368050988440914	0.779719718452375	1.0	12.128196611765569	-7.485876229048889	24.99501690764294	0.7752214959242391	1.0474960153885085	0.31771487990009506	0.1760810979423643	657.9028088532743	444410.1186192343	0.04933217825950346	0.07314692073345544	3.2668092073056024e-08	7.485876229048889	0.2722745194642694	
NDLQDTEIS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	NDLQDTEISPR	11	0	Q9NS91	Q9NS91	RAD18	E3 ubiquitin-protein ligase RAD18	1	NDLQDTEIS(1)PR	165.51	7.4977e-05	30951000.0	2245.0	2152.1	3360.0	2339.8	1864.5	1649.6	2092.3	2657.3	2326.0	2692.1	True	False	2146.312488087099	2507.69794555466	2654.781917116795	2134.673366773856	2109.7144308238267	1968.361853579176	2561.5515358690145	2563.841252828022	2217.8647676925502	2204.5346030176347	0.973589838485257	1.1375180694020615	1.2042369003792672	0.9683102110766822	0.9569885761538897	0.8928695657055334	1.1619466223676798	1.162985261977089	1.0060467023999844	1.0	11.106258406755302	-10.573069812710031	0.004285050529608117	7.02608855824606e-06	2.0808857934353915	0.008946252536606414	0.10293123619800826	125163.98377078137	215.39370527853814	52885.12271119636	51704.238080520656	2.6725767582045528e-11	10.573069812710031	2.0808787673468334	
NDS(ph)GEENVPLDLTREPSDNLR	ddPTM_K562_Methotrexat_30min_R1	1	NDSGEENVPLDLTREPSDNLR	21	1	Q6R327-3;Q6R327;Q6R327-4	Q6R327-3	RICTOR	Rapamycin-insensitive companion of mTOR	1	NDS(0.713)GEENVPLDLT(0.237)REPS(0.049)DNLR	55.206	0.026076	17744000.0	443.48	424.74	729.35	575.46	395.78	421.64	340.57	532.61	488.11	655.17	True	False	423.98515020795844	494.9210656544243	576.2694021574804	525.010315259288	447.83200720378335	503.1159626231352	416.95149193275836	513.8778044137784	465.41787263904143	536.5123642728963	0.7902616574038523	0.9224783967936354	1.0741027430718477	0.9785614465210015	0.8347095743277114	0.9377527828365684	0.7771516924830394	0.9578116715170336	0.867487692049362	1.0	9.067467608975809	-7.7451220433697525	24.97872816974227	0.8898728060849121	0.9494852722279892	0.05470242957797222	0.08817187007587272	630.8083845935938	965643.5219708674	0.026327504745474902	0.03388680070667356	1.7983654760012206e-08	7.7451220433697525	0.059612466143077025	
NDS(ph)PTQIPVSSDVCR	ddPTM_K562_Methotrexat_30min_R1	2	NDSPTQIPVSSDVCR	15	0	Q8TC07-2;Q8TC07-3;Q8TC07	Q8TC07-2	TBC1D15	TBC1 domain family member 15	1	NDS(0.901)PT(0.099)QIPVSSDVCR;NDS(0.926)PT(0.074)QIPVSSDVCR	274.45	6.561299999999998e-125	90692000.0	2974.5	2233.6	3824.3999999999996	2944.0	2342.3999999999996	2099.48	2351.4700000000003	2550.8	2841.7	3234.2	True	False	2843.744541565736	2602.664435291523	3021.7107035182935	2685.90409085487	2650.4666574211487	2505.174796527893	2878.8470057113755	2461.086918192798	2709.5899872536206	2648.4550399612326	1.0737371405811602	0.9827104466646412	1.1409333584769952	1.014139960969164	1.000759543745151	0.9459004433636007	1.0869910805635254	0.9292538030884687	1.0230832490527317	1.0	11.370935302387238	-7.5047926378246	24.12477253240989	0.9970458592133981	1.0608272208364224	0.24365461258631071	0.05356128552719851	687.4626997151096	916995.9428425636	0.014453902270369051	0.020956922438554407	3.1275723296752186e-08	7.5047926378246	0.06378136162302439	
NDS(ph)WGSFDLR	ddPTM_K562_Methotrexat_30min_R1	4	NDSWGSFDLR	10	0	Q7Z417	Q7Z417	NUFIP2	Nuclear fragile X mental retardation-interacting protein 2	1	NDS(0.999)WGS(0.001)FDLR;NDS(0.975)WGS(0.025)FDLR;NDS(0.936)WGS(0.064)FDLR;NDS(0.998)WGS(0.002)FDLR	162.67	4.379e-09	375637000.0	15420.0	12473.4	18892.3	16285.8	12037.0	11149.900000000001	11672.2	14867.3	14732.4	17410.8	True	False	14742.155263386665	14534.417338451509	14927.064408555238	14858.049199335686	13620.07648368272	13304.460372952506	14289.987973507768	14344.408632134142	14047.493939618967	14257.535405898538	1.0339904368946988	1.0194200417302433	1.0469596591273207	1.0421190462685934	0.955289683380194	0.9331528903269122	1.0022761695261724	1.0060931446959385	0.9852680382478536	1.0	13.799436994922392	-7.750350320728353	24.998268558481424	0.9793880986634984	1.0352748161549443	0.6016432828692401	0.022025624195615195	166.20529252447506	374678.0681386289	0.007235568153109544	0.00925137685453071	1.7768455512746514e-08	7.750350320728353	0.055886717491445914	
NDSGEENVPLDLT(ph)REPSDNLR	ddPTM_K562_Methotrexat_30min_R1	1	NDSGEENVPLDLTREPSDNLR	21	1	Q6R327-3;Q6R327;Q6R327-4	Q6R327-3	RICTOR	Rapamycin-insensitive companion of mTOR	1	NDS(0.119)GEENVPLDLT(0.775)REPS(0.106)DNLR	72.968	0.032082	17575000.0	321.41	311.15	559.41	512.3	481.65	397.32	358.16	599.41	500.73	663.35	True	False	307.2812012454676	362.5622488542968	441.99748578997185	467.3874543970619	544.9954173270562	474.09646681867014	438.4864971977473	578.328410551178	477.4511715935903	543.2108870070754	0.5656757045840748	0.6674428983776505	0.8136756761729166	0.8604162132541613	1.0032851519781074	0.8727668722377705	0.8072122773784466	1.064648048086056	0.8789425672673814	1.0	9.08536858407335	-6.699406846222561	1.1475010889339647	0.9327204700086642	0.5103855909000884	0.7549107574162264	0.07186736483956786	0.40685132081726505	0.7447735304835523	0.023407228925718827	0.17429654606962822	1.9979892801945937e-07	6.699406846222561	-0.4223348791085758	
NDSPT(ph)QIPVSSDVCR	ddPTM_K562_Methotrexat_30min_R1	1	NDSPTQIPVSSDVCR	15	0	Q8TC07-2;Q8TC07-3;Q8TC07	Q8TC07-2	TBC1D15	TBC1 domain family member 15	1	NDS(0.095)PT(0.905)QIPVSSDVCR	232.73	1.5715999999999999e-47	57187000.0	1313.3	1235.8	2083.9	1486.2	1127.0	1040.8	1030.8	1481.7	1238.3	1444.8	True	False	1255.5689045010192	1439.994944991612	1646.5178681784785	1355.9071534743573	1275.2202539761088	1241.9198697897707	1261.9831396901877	1429.587771164446	1180.7317032818935	1183.132719601753	1.0612240568612188	1.2171034754886332	1.3916594824059152	1.1460313209246389	1.0778336469346843	1.0496877055414422	1.0666454564074401	1.2083071894467179	0.9979706280790985	1.0	10.208396203793251	-7.515588287675275	14.028805232305555	1.0795286152406858	1.2303966822637045	0.36248274622964316	0.092423776111998	1.2608926302248071	2420.7246337658476	0.027071400551245912	0.03695764217617875	3.050785772208458e-08	7.515588287675275	0.1508680670230187	
NDSVIVADQTPT(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	3	NDSVIVADQTPTPTR	15	0	B8ZZU6;E9PBF9;P15336-5;P15336;E9PEK8;H7C2N6;P15336-3;P15336-7	B8ZZU6	ATF2	Cyclic AMP-dependent transcription factor ATF-2	1	NDSVIVADQT(0.115)PT(0.885)PTR;NDSVIVADQT(0.082)PT(0.913)PT(0.005)R;NDSVIVADQT(0.136)PT(0.823)PT(0.041)R	195.89	2.1519e-08	55672000.0	5365.9	3609.22	4894.8	4897.6	3876.7000000000003	3902.9000000000005	3848.2100000000005	4935.5	5475.6	6194.099999999999	True	False	5130.021460947241	4205.582258749495	3867.448371399784	4468.235012014542	4386.554000522783	4657.080188126921	4711.269051209915	4761.91566753197	5221.040551151043	5072.288467943808	1.0113820405460567	0.8291291564602877	0.762466171993479	0.8809110602153635	0.8648076757158477	0.9181418244563674	0.9288251409564956	0.9388101046749701	1.0293264241865043	1.0	12.30842108050172	-9.090499982217203	0.949193645129087	1.0106651772199886	0.8615993516372983	0.43077698845560086	0.06066585540791904	0.5513229229679556	0.9040426400170598	0.05326291324996067	0.024019566921291143	8.118952821798658e-10	9.090499982217203	-0.14906582558269033	
NDSWGS(ph)FDLR	ddPTM_K562_Methotrexat_30min_R1	1	NDSWGSFDLR	10	0	Q7Z417	Q7Z417	NUFIP2	Nuclear fragile X mental retardation-interacting protein 2	1	NDS(0.139)WGS(0.861)FDLR	114.71	0.0029906999999999998	19074000.0	1712.2	1282.6	1638.7	1588.7	1219.7	1174.6	1079.0	1681.3	1496.2	1802.1	True	False	1636.9337381303928	1494.5278495276277	1294.7592641605027	1449.4211376158746	1380.1119288151365	1401.5748261482172	1320.9932166528058	1622.1677260300878	1426.6419885733415	1475.7222272939632	1.1092424494628936	1.012743334677657	0.8773732889655711	0.982177479479782	0.9352111822194699	0.949755177651752	0.8951503150258268	1.0992364931743708	0.9667415467403914	1.0	10.527205475560018	-11.6659599263943	7.4834584197427985	1.0000025025147603	0.9774865021584576	0.004297854352003583	0.07274704512580783	0.0	0.0	0.07136353871930547	0.017308200468091305	2.1579435196450436e-12	11.6659599263943	-0.022516000356302746	
NEEPS(ph)EEEIDAPKPK	ddPTM_K562_Methotrexat_30min_R1	4	NEEPSEEEIDAPKPK	15	1	Q9NR30;Q9NR30-2	Q9NR30	DDX21	Nucleolar RNA helicase 2	1	NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK	136.36	3.2650999999999996e-05	692778000.0	24584.300000000003	13151.500000000002	45948.8	25524.7	14536.0	11675.3	11431.8	17171.4	18351.2	31183.0	True	False	23503.603608409645	15324.561837722285	36304.77480750481	23286.9891806533	16447.738785977566	13931.38648708351	13995.67215396807	16567.472129157824	17498.056717489042	25535.456530551968	0.9204301313465335	0.6001287589821303	1.4217397979185473	0.9119472429557512	0.6441137547824384	0.5455702924447527	0.5480877985174422	0.6488026603062932	0.685245501546191	1.0	14.640214231765068	-7.7155087375585705	5.143056445607294	0.6472385449497096	0.9756587563199796	0.28030729085600115	0.2214692547038811	0.2361576201781148	13.92666335515318	0.06667639327545995	0.08484896619747294	1.925268310268587e-08	7.7155087375585705	0.32842021137027	
NEEQMKLPAEGPEPEADS(ph)QEQVHPK	ddPTM_K562_Methotrexat_30min_R1	1	NEEQMKLPAEGPEPEADSQEQVHPK	25	1	O75459	O75459	PAGE1	P antigen family member 1	1	NEEQMKLPAEGPEPEADS(1)QEQVHPK	40.937	0.033572000000000005	16102000.0	1627.2	681.72	2364.9	1412.7	1163.8	886.89	907.37	1155.4	1256.8	1869.4	True	False	1555.6702363542665	794.3626427412869	1868.5398082706872	1288.8507843582468	1316.8600990039	1058.268940543669	1110.8708201985698	1114.7639271130463	1198.3716423198614	1530.8335451436305	1.0162242925035365	0.5189085679898371	1.2206028631907013	0.8419274508629351	0.8602242243655207	0.6913024240296334	0.7256640173078663	0.7282071461325689	0.7828229568926934	1.0	10.580101704892783	-8.072709498653284	5.090477447409388	0.7648064782440251	0.8907710542134358	0.07506660459143943	0.18144865545400346	0.5467064738425899	26.20365683211724	0.058198505208798386	0.059095203712755756	8.458444447653276e-09	8.072709498653284	0.12596457596941069	
NEGY(ph)GCAGVS(ph)S(ph)VAY(ph)GLLAR	ddPTM_K562_Methotrexat_30min_R1	1	NEGYGCAGVSSVAYGLLAR	19	0	K7EKH1	K7EKH1	GCDH		4	NEGY(1)GCAGVS(1)S(1)VAY(1)GLLAR	52.568999999999996	0.024373	19828000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
NESSDSALGDS(ph)ESEDTGHDMTR	ddPTM_K562_Methotrexat_30min_R1	2	NESSDSALGDSESEDTGHDMTR	22	0	A0A087WX11;J3KNG8;Q8TF40-3;Q8TF40	A0A087WX11	FNIP1	Folliculin-interacting protein 1	1	NESSDSALGDS(0.998)ES(0.002)EDTGHDMTR;NESSDSALGDS(0.993)ES(0.007)EDTGHDMTR	115.34	0.00010592	22328000.0	5924.700000000001	4745.5	7353.6	6430.4	5212.2	5886.8	5121.3	5783.4	7604.799999999999	7668.0	True	False	5664.257282035472	5529.613215291871	5810.179852889899	5866.656815840072	5897.695659072115	7024.3407854327725	6269.881891050989	5579.9945439376725	7251.254507888349	6279.250895560801	0.902059397887715	0.8806167020975549	0.9252982480756553	0.9342924679100787	0.9392355485017437	1.1186590410647108	0.9985079423221589	0.8886401637307602	1.1547961099969295	1.0	12.616376742867907	-8.029702909610092	17.029931866017932	1.023715224339187	0.9128891301302781	0.41633512475335577	0.06885528286885324	15.225264783907052	8728.899572138811	0.022404397674527142	0.02253223708735811	9.338929359881733e-09	8.029702909610092	-0.11082609420890888	
NESVSRSWS(ph)DFSK	ddPTM_K562_Methotrexat_30min_R1	1	NESVSRSWSDFSK	13	1	A0A3B3IRM4;O75191-2;O75191	A0A3B3IRM4	XYLB	Xylulose kinase	1	NES(0.002)VSRS(0.003)WS(0.992)DFS(0.003)K	81.632	0.024382	18647000.0	2889.9	2496.0	3069.3	2495.8	2860.9	2356.0	2476.8	3106.4	2738.8	3018.1	True	False	2762.863456268554	2908.421575254139	2425.0958744662416	2276.9970889794813	3237.1584956523952	2811.263656057552	3032.2854485687412	2997.146151275719	2611.4737857937916	2471.492844013047	1.117892557512891	1.1767873746021598	0.9812271479323933	0.921304342229955	1.309798854362091	1.1374759440908628	1.2269044014892296	1.2126865584644586	1.0566382144782798	1.0	11.271167013951088	-7.759302170467372	24.999711700374217	1.1703789283537591	1.053546372044898	0.19695404489848345	0.10465103259496107	90.28242389784157	1056054.1393981776	0.03184922720502351	0.039118523760889846	1.740595392332555e-08	7.759302170467372	-0.11683255630886102	
NFDFEGS(ph)LSPVIAPK	ddPTM_K562_Methotrexat_30min_R1	1	NFDFEGSLSPVIAPK	15	0	Q9H1A4;H0Y564	Q9H1A4	ANAPC1	Anaphase-promoting complex subunit 1	1	NFDFEGS(0.5)LS(0.5)PVIAPK	154.47	9.2855e-09	59800000.0	6821.4	4986.8	9715.2	7914.6	5258.8	4329.4	4624.5	6185.2	7363.3	8966.6	True	False	6521.539423713734	5810.783938893162	7676.112286063419	7220.739306209228	5950.424375873614	5165.995276967557	5661.6618446810935	5967.66301019527	7020.981790176512	7342.661851869519	0.8881710141742782	0.7913729456864033	1.0454127455302875	0.9833953206452987	0.8103906316152327	0.7035589247041576	0.7710639491371342	0.8127383679906001	0.9561902661211201	1.0	12.842087446412892	-5.899357398495904	19.235501202690024	0.8655433394429688	2.842938782773545	0.0	0.10910283759045779	4305.360332823636	896627.964936778	0.028319412947407935	33410.202514455385	1.2607895528300536e-06	5.899357398495904	1.977395443330576	
NFDFEGSLS(ph)PVIAPK	ddPTM_K562_Methotrexat_30min_R1	1	NFDFEGSLSPVIAPK	15	0	Q9H1A4;H0Y564	Q9H1A4	ANAPC1	Anaphase-promoting complex subunit 1	1	NFDFEGS(0.117)LS(0.883)PVIAPK	144.4	1.1201e-08	61519000.0	11175.0	7512.3	15673.0	11400.0	8254.2	6798.2	6995.2	9525.9	10694.0	13740.0	True	False	10683.760380567177	8753.579887733034	12383.451484217712	10400.579699641827	9339.771979032468	8111.855936591876	8564.051667404734	9190.868697668477	10196.838274163425	11251.552856677805	0.9495365232387775	0.7779886029276197	1.100599325440499	0.9243683811580794	0.8300873753163153	0.720954346472939	0.7611439751022423	0.8168533547983725	0.9062605316839972	1.0	13.457836504905218	-7.753764493679092	5.287029201118869	0.8196346365654636	0.9393965609813255	0.16877804729820878	0.10268423721187686	0.26838764253611025	22.033984753318034	0.03138643649668207	0.03860277508010806	1.7629317781645703e-08	7.753764493679092	0.11976192441586186	
NFIGNSNHGSQS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	NFIGNSNHGSQSPR	14	0	E7EUL6;A0A0C3SFZ7;Q03112-5;Q03112-6;Q03112-1;Q03112-4;Q03112;Q03112-3	E7EUL6	MECOM	MDS1 and EVI1 complex locus protein EVI1	1	NFIGNSNHGS(0.093)QS(0.907)PR	102.15	0.0033398000000000004	6723200.0	2866.7	1721.4	2718.0	2800.2	1486.5	1550.7	1725.4	2417.5	2268.0	2863.0	True	False	2740.683300489658	2005.832091202914	2147.5289436676912	2554.710813590967	1682.0008052666233	1850.3508282888151	2112.3648711888336	2332.475154747955	2162.561175032976	2344.482956962776	1.1689926311258627	0.8555541362524655	0.9159925591652693	1.0896691767384552	0.7174293164602983	0.7892362035704036	0.9009939120757585	0.9948782727640824	0.9224043060797185	1.0	11.195054076199108	-6.254686733783236	24.504915787087796	0.905208532739708	1.168992791946598	0.3704100746557488	0.10132015984386672	676.0738418189051	2453344.532287499	0.02617946548844669	0.245502190485601	5.563053879630806e-07	6.254686733783236	0.2637842592068901	
NFQAATESVPNSGNIHNGSLEQTEEPETSSHSPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	NFQAATESVPNSGNIHNGSLEQTEEPETSSHSPSR	35	0	E7EUR8;A0A1B0GVL4;P78312-4;P78312-6;P78312-2;P78312-5;P78312	E7EUR8	FAM193A	Protein FAM193A	1	NFQAATESVPNSGNIHNGSLEQTEEPET(0.179)S(0.179)S(0.179)HS(0.041)PS(0.422)R	93.175	1.9488999999999999e-10	81196000.0	1352.6	1120.9	1634.6	1597.5	1222.5	1482.4	1244.4	1551.9	1515.3	1606.0	True	False	1293.1413235575092	1306.1096729576777	1291.5197981306883	1457.449655278756	1383.2801778933392	1768.8528199234802	1523.4883770183067	1497.3187973747065	1444.854033742271	1315.137837541815	0.9832743661109922	0.9931351951663011	0.9820413961662966	1.1082105720590798	1.0518138391325522	1.3449942427553638	1.1584248688836518	1.1385261336358585	1.0986331565388723	1.0	10.36099829871707	-7.489027776233037	1.7820384197731312	1.153789432585248	0.9835274231872967	0.3610022450778916	0.08545585405194363	0.35978355819063856	2.285654553485638	0.028203124164294557	0.04709070213145509	3.243188741783365e-08	7.489027776233037	-0.17026200939795133	
NFS(ph)DNQLQEGK	ddPTM_K562_Methotrexat_30min_R1	1	NFSDNQLQEGK	11	0	P37802;P37802-2;X6RJP6	P37802	TAGLN2	Transgelin-2	1	NFS(1)DNQLQEGK	105.19	0.0037976999999999998	58236000.0	2334.1	1807.0	3309.5	2484.2	1718.2	1713.9	1331.4	2271.0	2406.6	2599.7	True	False	2231.4957587724257	2105.5760362516935	2614.88117699346	2266.414042969319	1944.173416487799	2045.0869185556205	1630.0003416603772	2191.1276427849475	2294.717691284991	2128.8691383919404	1.048207106077927	0.989058462204097	1.2282958730702598	1.064609375041847	0.9132423320093536	0.960644729952915	0.7656648838883596	1.029244871500197	1.0779045315196432	1.0	11.055871554698683	-7.676061320030765	5.985771980896933	0.950059286109401	1.088740355745336	0.28839817503122533	0.09583252098501793	0.27008231950620104	14.971002040459188	0.029815142005277854	0.03847189655133401	2.1083304440665733e-08	7.676061320030765	0.13868106963593485	
NFVFHTLS(ph)PVKAEAAK	ddPTM_K562_Methotrexat_30min_R1	1	NFVFHTLSPVKAEAAK	16	1	E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4	E7ESG2	CLSPN	Claspin	1	NFVFHT(0.01)LS(0.99)PVKAEAAK	82.609	0.013827	9564000.0	3045.0	1959.3	5259.6	3651.4	1795.9	1552.9	1325.5	2433.5	2416.2	3437.6	True	False	2911.1454459800507	2283.0410225943256	4155.681836686751	3331.2874311642267	2032.09232840789	1852.9759471527066	1622.7771164720068	2347.9124256790706	2303.87138938037	2815.0173289749346	1.034148321580713	0.811022013646245	1.4762544421707018	1.1833985520711832	0.7218756017917161	0.6582467283877974	0.5764714482460851	0.834066775188927	0.8184217431511536	1.0	11.458928088086331	-7.76432245894524	24.994350999723935	0.7448015471010101	1.1286962063661858	0.466164177919544	0.1866848019848161	66.46881147714087	576240.5690202758	0.05936489265173588	0.07029086378496185	1.720590580740575e-08	7.76432245894524	0.38389465926517574	
NFYQEHPDLAR	ddPTM_K562_Methotrexat_30min_R1	2	NFYQEHPDLAR	11	0	J3KTA4;P17844-2;P17844;J3QR02;J3KRX8;J3KTQ4;J3QRQ7;X6RLV5	J3KTA4	DDX5	Probable ATP-dependent RNA helicase DDX5	0	;	174.57	0.0014960999999999998	63617700.0	5002.6	4355.7	6543.1	5558.9	4341.2	4492.7	4059.6	4988.4	5043.0	5553.4	False	True	4782.691693944107	5075.405390758992	5169.792726752049	5071.559867749031	4912.143892245859	5360.850690819088	4970.068639781029	4812.955144547964	4808.5520307280885	4547.625446453748	1.05168988744965	1.1160561595319616	1.1368114607555178	1.1152105483321737	1.080155775818425	1.1788241476657881	1.0928931369351675	1.058344668271025	1.0573764456520516	1.0	12.15089771989575	-9.73306320502056	1.2664914796467417	1.0057531341824804	1.113346704976471	0.5307892936578404	0.03293572434879267	0.3274654962876787	1.0531740556644176	0.031004515318251876	0.0099654639999989	1.848999505367195e-10	9.73306320502056	0.10759357079399057	
NFYQEHPDLARR	ddPTM_K562_Methotrexat_30min_R1	2	NFYQEHPDLARR	12	1	J3KTA4;P17844-2;P17844;J3QR02;J3KRX8;J3KTQ4;J3QRQ7;X6RLV5	J3KTA4	DDX5	Probable ATP-dependent RNA helicase DDX5	0	;	123.62	0.00030285	20355900.0	5816.0	4862.700000000001	6671.2	7649.799999999999	5674.4	4818.5	5118.8	5700.5	5542.6	8091.900000000001	False	True	5560.335603881766	5666.178523232489	5271.006287342127	6979.153911080703	6420.683060480948	5749.606929844361	6266.821202411847	5500.0101839258405	5284.925735775038	6626.378497885811	0.839121339907738	0.8550943060436889	0.7954580754817847	1.0532380414592144	0.9689580911397544	0.8676846533410082	0.945738491154907	0.8300175104215152	0.7975586872167396	1.0	12.694004896989435														
NGDECAYHHPIS(ph)PCK	ddPTM_K562_Methotrexat_30min_R1	1	NGDECAYHHPISPCK	15	0	G3V5I6;G3V256;H0YJA2;Q6PJT7-10;Q6PJT7-4;Q6PJT7-3;Q6PJT7-11;Q6PJT7-5;Q6PJT7-9;Q6PJT7-2;Q6PJT7;H0YJ51;G3V411;Q6PJT7-8;Q6PJT7-6	G3V5I6	ZC3H14	Zinc finger CCCH domain-containing protein 14	1	NGDECAYHHPIS(1)PCK	70.986	0.032858	10282000.0	1929.5	1472.2	3019.7	2193.4	1646.5	1440.3	1145.0	1767.3	2002.8	2482.7	True	False	1844.6814903180662	1715.4560268786627	2385.906236642136	2001.1080274731908	1863.043609735282	1718.6175907553884	1401.7953967261021	1705.1430572848233	1909.6902651481694	2033.058972145121	0.9073428344145403	0.8437807512630343	1.1735548596136975	0.9842843001065442	0.9163746036198583	0.8453358285726659	0.6895006076715227	0.8387081145441112	0.939318677575406	1.0	10.989436348141526	-8.032877138734403	3.1498227196161266	0.8425530911780269	0.9805534413648905	0.18528017420120935	0.10910472698627392	0.3849521876190582	7.744987991992881	0.0387898762237715	0.041185643372896576	9.270920592547646e-09	8.032877138734403	0.13800035018686363	
NGGELTHPTHSPGQS(ph)SPRPVISQR	ddPTM_K562_Methotrexat_30min_R1	1	NGGELTHPTHSPGQSSPRPVISQR	24	1	Q9H9J4-2;Q9H9J4;C9JPC9;E7EWZ4	Q9H9J4-2	USP42	Ubiquitin carboxyl-terminal hydrolase 42	1	NGGELTHPTHSPGQS(0.592)S(0.386)PRPVIS(0.022)QR	80.277	0.00088896	29465000.0	1342.8	1443.0	2007.1	1798.8	1364.8	1652.8	1337.2	1464.1	1534.1	1695.4	True	False	1283.772119823321	1681.4312231937986	1585.8371386443807	1641.1019968171686	1544.2951221176504	1972.180208290289	1637.1011393031815	1412.6067731402193	1462.7800258457187	1388.346631238104	0.9246769437388087	1.2111033263316429	1.142248702854674	1.1820549421102866	1.1123267686690566	1.4205243589142664	1.1791731995944288	1.0174741245134729	1.0536129759908994	1.0	10.439152098064326	-11.404574513325308	11.271901899995056	0.9999999999989063	1.1468967996998218	0.09482706821029918	0.12542840070849987	0.0	0.0	0.12453479814640982	0.030204125107213074	3.939358329863367e-12	11.404574513325308	0.14689679970091551	
NGGELTHPTHSPGQSS(ph)PRPVISQR	ddPTM_K562_Methotrexat_30min_R1	2	NGGELTHPTHSPGQSSPRPVISQR	24	1	Q9H9J4-2;Q9H9J4;C9JPC9;E7EWZ4	Q9H9J4-2	USP42	Ubiquitin carboxyl-terminal hydrolase 42	1	NGGELTHPTHS(0.002)PGQS(0.174)S(0.783)PRPVIS(0.04)QR;NGGELTHPTHS(0.001)PGQS(0.174)S(0.652)PRPVIS(0.174)QR	69.133	0.0024107	50734000.0	4617.4	3838.7	6364.3	4894.299999999999	3983.4	4165.7	3946.9	4534.0	4497.8	4978.4	True	False	4414.42462471865	4472.9799282564345	5028.5204033054815	4465.224317890962	4507.286920752821	4970.662568777143	4832.092795928604	4374.536650104337	4288.698259728096	4076.7635183176662	1.0828257770861147	1.0971889608407486	1.2334589388644674	1.0952865668631178	1.1056042128763988	1.2192668391097545	1.185276696628858	1.073041551330785	1.051986027754165	1.0	11.993208557199766	-9.601089565912345	2.444026155832779	1.0180739864309591	1.1459578072151428	0.46975703826082016	0.05181066737764472	0.27504252325679357	3.052859788933491	0.046637401174316265	0.014605184444706421	2.505592463556587e-10	9.601089565912345	0.1278838207841837	
NGGQASSS(ph)PNYEGPLHSLQSR	ddPTM_K562_Methotrexat_30min_R1	1	NGGQASSSPNYEGPLHSLQSR	21	0	E9PH57;P15884-5;A0A1B0GVR6;P15884-15;H3BTP3;H3BPJ7;A0A1B0GVB8;P15884-10;P15884-4;P15884-14;P15884-13;P15884-12;P15884;P15884-3;A0A1B0GW91;P15884-2;A0A1B0GWD5;P15884-16;P15884-8;P15884-6;P15884-9;P15884-7;P15884-11;A0A0D9SG78	E9PH57	TCF4	Transcription factor 4	1	NGGQAS(0.033)S(0.224)S(0.742)PNY(0.001)EGPLHSLQSR	81.763	0.0017047	12340000.0	2114.4	1721.6	2377.8	2106.8	1871.3	1691.4	1447.2	1784.7	1765.9	2057.8	True	False	2021.4535077110734	2006.0651378034952	1878.7322745596157	1922.1001150180168	2117.4087500137457	2018.2391119931006	1771.7714394253394	1721.9310894224095	1683.8036944403598	1685.1124795103037	1.1995955951252055	1.1904636409709937	1.114900220254483	1.1406360930734916	1.2565385253268482	1.1976880692139933	1.0514262169254238	1.0218493485507896	0.9992233248012475	1.0	10.71862917768097	-8.861879261457661	4.01478290977134	1.012629154120855	1.1819787944266047	0.8356015870470189	0.03619221501586012	0.09873943803106852	2.939642374921519	0.017777200824619806	0.011747493199582008	1.3744240265816594e-09	8.861879261457661	0.16934964030574973	
NGLVNS(ph)EVHNEDGR	ddPTM_K562_Methotrexat_30min_R1	2	NGLVNSEVHNEDGR	14	0	F2Z3N7;C9JZ87;Q9NUM4	F2Z3N7	TMEM106B	Transmembrane protein 106B	1	NGLVNS(1)EVHNEDGR;NGLVNS(1)EVHNEDGR	126.84	0.00073183	14593400.0	3353.5	2594.5	3053.8	3846.1	2352.77	2231.2	2331.5	2286.3999999999996	2958.8	3632.2	True	False	3206.0841553675214	3023.19702604041	2412.849112646211	3508.9183844554755	2662.200494185775	2662.347822324115	2854.3982248619245	2205.986016056144	2821.2460338128644	2974.37338326238	1.0779023821989002	1.0164147658975078	0.8112125821942796	1.1797168453029898	0.8950458302130836	0.8950953627092958	0.9596637197348562	0.7416641193973279	0.9485177784634554	1.0	11.538370049862948	-7.907649269784095	23.76358193204845	0.8957485736672443	1.009885605042212	0.20934192447417543	0.10698836844375574	19.239092618435038	4939.8794686124065	0.03232402161386963	0.03665199107796146	1.2369459706428036e-08	7.907649269784095	0.11413703137496778	
NGPLNESQEDEEDS(ph)EHGTSLNR	ddPTM_K562_Methotrexat_30min_R1	1	NGPLNESQEDEEDSEHGTSLNR	22	0	Q9H2K8	Q9H2K8	TAOK3	Serine/threonine-protein kinase TAO3	1	NGPLNESQEDEEDS(0.982)EHGT(0.013)S(0.005)LNR	116.99	5.8812e-06	19619000.0	1130.9	779.43	1082.5	1197.4	1095.7	1038.7	737.65	920.57	817.24	1050.8	True	False	1081.1869901014256	908.217559455262	855.2980432377769	1092.425801083432	1239.8037553519268	1239.4140745106022	903.0867898646363	888.1930313159572	779.2466907777562	860.4899375398127	1.256478365328243	1.0554656363000654	0.9939663509408609	1.2695393094389185	1.4408114508539087	1.4403585915881296	1.0495030220186077	1.0321945586666001	0.9055848962111802	1.0	9.749014511446024	-8.979649001000112	23.98778864355439	0.9895035357990146	1.2341460837182037	0.4438771011423849	0.1362254114317093	167.34776554581276	197252.60602948096	0.06617560333185772	0.04460861487242486	1.047975184728869e-09	8.979649001000112	0.24464254791918905	
NGPSS(ph)SPFSSPASSR	ddPTM_K562_Methotrexat_30min_R1	4	NGPSSSPFSSPASSR	15	0	A8CG34-2;A8CG34;C9JFL1;A6NF01;Q96HA1-2;Q96HA1-3;Q96HA1	A8CG34-2;Q96HA1-2	POM121C;POM121B;POM121	Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121	1	NGPS(0.19)S(0.695)S(0.114)PFSSPASSR;NGPS(0.012)S(0.861)S(0.126)PFSSPASSR;NGPS(0.003)S(0.498)S(0.498)PFSSPASSR;NGPS(0.188)S(0.446)S(0.361)PFS(0.005)S(0.001)PASSR	149.6	3.4778999999999997e-09	83493900.0	4111.8	3539.24	4553.58	4382.85	3701.83	3908.23	3291.0499999999997	4288.26	4475.1	4578.3099999999995	True	False	3931.050195330304	4124.039253206114	3597.8457863525873	3998.6123453136133	4188.685530413821	4663.440135192621	4029.151738336624	4137.439465191095	4267.053577773402	3749.133694269033	1.0485222763166195	1.0999979167214458	0.9596472358007114	1.0665430127034243	1.117240907363931	1.2438713888280928	1.074688732625254	1.1035721322810201	1.1381438822243302	1.0	11.872341557772708	-7.669602095448761	4.2204262983355765	1.122782248161728	1.0386449237276063	0.21081899465051357	0.06551556113871075	0.3072534195420719	10.031702622698228	0.019689585194301452	0.02550778010013281	2.139921807417277e-08	7.669602095448761	-0.0841373244341217	
NGPSSS(ph)PFSS(ph)PASSR	ddPTM_K562_Methotrexat_30min_R1	1	NGPSSSPFSSPASSR	15	0	A8CG34-2;A8CG34;C9JFL1;A6NF01;Q96HA1-2;Q96HA1-3;Q96HA1	A8CG34-2;Q96HA1-2	POM121C;POM121B;POM121	Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121	2	NGPS(0.018)S(0.095)S(0.886)PFS(0.173)S(0.565)PAS(0.148)S(0.115)R	115.73	0.0019248000000000002	14880000.0	1797.1	1602.9	2662.8	2253.1	1416.3	1475.6	1371.6	1778.6	2036.9	2144.4	True	False	1718.101635786782	1867.7519803585164	2103.9146693150597	2055.5742211634197	1602.568274806001	1760.7388161623617	1679.216214977747	1716.045629879924	1942.204963591125	1756.0283803391471	0.9784019751747747	1.0636228897381441	1.1981097189948173	1.170581434889122	0.912609552754775	1.0026824371837912	0.9562580159743403	0.9772311479091806	1.1060213976815232	1.0	10.77810044607504	-7.757388115212843	24.999670720286716	0.9900289635665573	1.106705756736358	0.35947604544990663	0.07194763321762573	118.5294543378516	731419.5281314417	0.0227341005746733	0.028276170911545565	1.7482836046464554e-08	7.757388115212843	0.11667679316980073	
NGPSSS(ph)PFSSPASSR	ddPTM_K562_Methotrexat_30min_R1	2	NGPSSSPFSSPASSR	15	0	A8CG34-2;A8CG34;C9JFL1;A6NF01;Q96HA1-2;Q96HA1-3;Q96HA1	A8CG34-2;Q96HA1-2	POM121C;POM121B;POM121	Nuclear envelope pore membrane protein POM 121C;Putative nuclear envelope pore membrane protein POM 121B;Nuclear envelope pore membrane protein POM 121	1	NGPSS(0.029)S(0.971)PFSSPASSR;NGPS(0.086)S(0.086)S(0.822)PFS(0.005)S(0.002)PASSR	226.67	1.02e-36	73060800.0	2697.2	2382.12	4100.0	2888.7	2768.4	2524.3	2229.7200000000003	2612.1	2625.8	3287.4	True	False	2578.63431753609	2775.724840883168	3239.466029815136	2635.452155996083	3132.493124318953	3012.085249145195	2729.7914689852596	2520.2309624476275	2503.7271311294503	2692.0200044426942	0.9578808156256337	1.0310936903523502	1.203358825145794	0.9789868394910677	1.1636217855548388	1.1188940810894015	1.0140309003945849	0.9361858226493266	0.930055173066136	1.0	11.39447341533953	-9.009470198196075	4.210715324741758	0.9521330732464586	1.0788183529511124	0.34865111290698203	0.07372309648273859	0.22966028132008182	9.670199997987766	0.03497858033079755	0.021053029601290334	9.78430093517822e-10	9.009470198196075	0.12668527970465382	
NGS(ph)EADIDEGLYSR	ddPTM_K562_Methotrexat_30min_R1	2	NGSEADIDEGLYSR	14	0	Q5JRS1;Q5JRS0;Q5JRS3;Q5JRS2;Q5JRR9;P22314-2;P22314	Q5JRS1	UBA1	Ubiquitin-like modifier-activating enzyme 1	1	NGS(1)EADIDEGLYSR;NGS(1)EADIDEGLYSR	189.44	6.2041e-06	16589200.0	1811.9099999999999	1413.15	2611.87	2057.52	1636.2800000000002	1503.4299999999998	1236.8600000000001	1878.66	1856.09	2121.07	True	False	1732.2606059197747	1646.649018057045	2063.6741803154287	1877.1404161058827	1851.479500599847	1793.9465697905796	1514.2573400826595	1812.5864629653745	1769.8007810259949	1736.923669411468	0.9973153319435889	0.948026126338061	1.1881202476874966	1.080727063119547	1.0659532904098168	1.032829825157736	0.8718041942486421	1.043561380897955	1.0189283571831724	1.0	10.762318639642341	-8.535151942032384	24.99201147898926	0.9822198005681007	1.0578041521165564	0.18710050418408308	0.0713458580405641	402.6391831207101	819890.4190934097	0.028510890181480678	0.022100741259043648	2.916406503093166e-09	8.535151942032384	0.07558435154845577	
NGSTAVAESVAS(ph)PQK	ddPTM_K562_Methotrexat_30min_R1	2	NGSTAVAESVASPQK	15	0	A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	NGSTAVAESVAS(1)PQK;NGSTAVAES(0.001)VAS(0.999)PQK	159.04	4.043e-09	36510000.0	4474.2	3067.42	5942.5	4357.6	3010.92	2802.67	2117.86	3133.6	3960.3	5223.4	True	False	4277.519525255811	3574.25901777486	4695.250459067423	3975.5759736104565	3406.9087551923176	3344.246311936684	2592.8440165155826	3023.3895118586106	3776.186517408773	4277.391644219129	1.0000298969669645	0.8356164960029907	1.0976900993887309	0.9294393182311058	0.7964921238383059	0.781842438126145	0.606174096781574	0.706830181413176	0.8828245883241175	1.0	12.062515593186777	-7.749532326572677	3.5369011406331157	0.7679549948921747	0.9705174082138752	0.33497099113463447	0.11519436319803833	0.23879916185801048	6.322757527916545	0.035826521258834614	0.044645448409907244	1.780195395639639e-08	7.749532326572677	0.20256241332170055	
NHLS(ph)PQQGGATPQVPSPCCR	ddPTM_K562_Methotrexat_30min_R1	5	NHLSPQQGGATPQVPSPCCR	20	0	A0A087X0R7;Q9H4L4	A0A087X0R7	SENP3-EIF4A1;SENP3	Sentrin-specific protease 3	1	NHLS(0.999)PQQGGAT(0.001)PQVPSPCCR;NHLS(1)PQQGGATPQVPSPCCR;NHLS(0.999)PQQGGAT(0.001)PQVPSPCCR;NHLS(1)PQQGGATPQVPSPCCR;NHLS(0.86)PQQGGAT(0.132)PQVPS(0.008)PCCR	267.93	7.487199999999998e-117	176578000.0	5571.18	5000.950000000001	6895.0	6297.0	4868.1	4364.15	4782.050000000001	5202.6900000000005	5296.67	6386.99	True	False	5326.277597942579	5827.271985884288	5447.833725750087	5744.951786723209	5508.34047771171	5207.460222658561	5854.546442719696	5019.708443787234	5050.428967796262	5230.244219801495	1.018361165197125	1.1141491182806473	1.0416021693833735	1.0984098534009274	1.053170797810426	0.9956437986095038	1.1193638760795561	0.9597464731728623	0.9656201040623573	1.0	12.35266259757225	-9.28031998462333	24.831562274593036	0.9720124513270938	1.0625030038684693	0.5170094197438451	0.038867717198976616	588.874737147101	774476.5203518358	0.020165844746304028	0.009715214057834124	5.244209288181454e-10	9.28031998462333	0.0904905525413755	
NHLSPQQGGATPQVPS(ph)PCCR	ddPTM_K562_Methotrexat_30min_R1	2	NHLSPQQGGATPQVPSPCCR	20	0	A0A087X0R7;Q9H4L4	A0A087X0R7	SENP3-EIF4A1;SENP3	Sentrin-specific protease 3	1	NHLS(0.001)PQQGGAT(0.066)PQVPS(0.934)PCCR;NHLSPQQGGAT(0.003)PQVPS(0.997)PCCR	123.71	1.1910999999999998e-05	38783000.0	3778.6	3725.0	4359.8	4632.4	3103.02	3424.8	3197.74	3834.6	4830.0	4938.1	True	False	3612.497268367889	4340.492935825986	3444.737560192201	4226.2846842649815	3511.121519514593	4086.59412956957	3914.914595569363	3699.7349445280297	4605.454354236896	4043.7622388326513	0.8933505619288686	1.073379857535589	0.8518645154534663	1.0451367896162511	0.8682809008395557	1.0105920892988218	0.9681366916120954	0.9149239559633617	1.138903348473424	1.0	11.981482458228179	-9.752678823194506	24.998787786596708	1.0694516894149786	0.9564795621487235	0.26848637936635555	0.07659790176225183	207.24071927472906	591386.3061935889	0.04824513773926643	0.017615508868817242	1.7673443539199448e-10	9.752678823194506	-0.11297212726625505	
NHSVNEEEQEEQGEGS(ph)EDEWEQVGPR	ddPTM_K562_Methotrexat_30min_R1	3	NHSVNEEEQEEQGEGSEDEWEQVGPR	26	0	Q14694;Q14694-3;Q14694-2;H3BNA1	Q14694	USP10	Ubiquitin carboxyl-terminal hydrolase 10	1	NHSVNEEEQEEQGEGS(1)EDEWEQVGPR;NHSVNEEEQEEQGEGS(1)EDEWEQVGPR;NHSVNEEEQEEQGEGS(1)EDEWEQVGPR	163.75	6.434199999999999e-28	204826000.0	3222.95	2787.33	4251.4	4054.2	3164.8	2597.7000000000003	2843.94	3213.3199999999997	3272.95	3663.82	True	False	3081.272977051366	3247.8889059908315	3359.0892388185534	3698.774580551571	3581.026672390051	3099.668760331371	3481.7659393582767	3100.305714272887	3120.7912688819138	3000.266694858314	1.0269996938378432	1.082533399966369	1.119596882695518	1.232815265019713	1.193569451184793	1.033131076528432	1.1604854812824235	1.0333433756359107	1.040171286849315	1.0	11.550875032799347	-9.309664224180477	8.99980840872582	1.0272384826461627	1.12340223649672	0.33855423363597603	0.061921186068304115	0.5900560140178699	105.22113018346447	0.03635392633402581	0.017464619781954134	4.901576394604165e-10	9.309664224180477	0.09616375385055731	
NHVDES(ph)PVEFPATR	ddPTM_K562_Methotrexat_30min_R1	1	NHVDESPVEFPATR	14	0	Q9UBC3-4;Q9UBC3-3;Q9UBC3-5;Q9UBC3-2;Q9UBC3-6;Q9UBC3	Q9UBC3-4	DNMT3B	DNA (cytosine-5)-methyltransferase 3B	1	NHVDES(1)PVEFPATR	92.671	0.008285899999999999	8902700.0	3091.4	2554.3	3832.7	3397.4	2742.4	2905.1	2336.1	3101.5	2701.1	3129.7	True	False	2955.505757537843	2976.3546593235747	3028.268646944503	3099.555216803786	3103.0736685927964	3466.469459767742	2860.029891957942	2992.4184870530635	2575.526450565067	2562.881002586936	1.1531966386869297	1.161331585945381	1.1815876913082626	1.209402704875934	1.2107755551118438	1.3525674646106225	1.1159433032868353	1.167599464833739	1.0049340753493303	1.0	11.323550778912638	-9.683384774434607	1.975982119145959	0.9893376667126657	1.2032844872172623	0.6230237001236609	0.059552419490033766	0.21852925786838856	1.5826417247214521	0.056494254077968355	0.016912203928986763	2.073076008245591e-10	9.683384774434607	0.21394682050459668	
NIDDAS(ph)QMDLFHRDSDDDQTEEQLDESEAR	ddPTM_K562_Methotrexat_30min_R1	1	NIDDASQMDLFHRDSDDDQTEEQLDESEAR	30	1	E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4	E7ESG2	CLSPN	Claspin	1	NIDDAS(0.685)QMDLFHRDS(0.311)DDDQT(0.004)EEQLDESEAR	75.10300000000001	1.8874000000000003e-05	12701000.0	887.71	628.72	1073.1	837.34	814.68	751.73	751.92	973.89	936.74	1075.8	True	False	848.687331313941	732.605293587252	847.870974779176	763.9317022542184	921.8246996532879	896.9911834329989	920.5572006168468	939.6377366938926	893.1911618608422	880.9621952848596	0.9633640760708437	0.8315967444554914	0.9624374114090293	0.8671560554391334	1.0463839476735042	1.0181948649260215	1.0449451810122046	1.0666039266191896	1.0138813749800335	1.0	9.782936299901923	-7.768553556555224	24.999999933032406	1.0349886110317548	0.904835497486914	0.6931757250175521	0.04087481573307512	83.202143699288	292381.00581733714	0.011659319343545556	0.01349763741837859	1.7039091827906077e-08	7.768553556555224	-0.13015311354484072	
NIDDASQMDLFHRDS(ph)DDDQTEEQLDESEAR	ddPTM_K562_Methotrexat_30min_R1	4	NIDDASQMDLFHRDSDDDQTEEQLDESEAR	30	1	E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4	E7ESG2	CLSPN	Claspin	1	NIDDAS(0.089)QMDLFHRDS(0.909)DDDQT(0.002)EEQLDESEAR;NIDDAS(0.063)QMDLFHRDS(0.936)DDDQT(0.001)EEQLDESEAR;NIDDAS(0.005)QMDLFHRDS(0.992)DDDQT(0.003)EEQLDESEAR;NIDDAS(0.011)QMDLFHRDS(0.982)DDDQT(0.008)EEQLDESEAR	105.58	4.8854e-12	179501000.0	3696.45	3000.54	4175.16	4188.3	3411.96	2985.39	3183.7799999999997	3673.2299999999996	3725.5699999999997	4318.530000000001	True	False	3533.958484004257	3496.3282345404878	3298.850972937305	3821.1182417552486	3860.692544593009	3562.2743659412813	3897.823710208407	3544.040418893416	3552.369063874607	3536.4023695887013	0.9993089345246852	0.9886681064935282	0.9328268189462205	1.080510033195024	1.0917005875216694	1.0073159085558436	1.10220028798978	1.0021598360442234	1.004514954074008	1.0	11.788066717645025	-7.264598945727842	24.999856959248746	1.044524226500808	0.9751079688984129	0.37042431454935565	0.040207869129535494	291.8949453875343	2309601.5554660717	0.011351542554742104	0.017663379113112256	5.4375223401471724e-08	7.264598945727842	-0.069416257602395	
NIDDGTSDRPYSHALVAGIDRYPR	ddPTM_K562_Methotrexat_30min_R1	1	NIDDGTSDRPYSHALVAGIDRYPR	24	2	K7ELC7;P61353	K7ELC7	RPL27	60S ribosomal protein L27	0		100.95	5.1016e-06	13356000.0	978.04	657.09	967.25	972.7	1037.9	861.87	817.91	1212.8	1102.7	1283.8	False	True	935.0465326720295	765.6629538797047	764.2374432533388	887.424901214176	1174.402042237624	1028.4141796461474	1001.347137935585	1170.1451365784158	1051.4357176846843	1051.2913797236504	0.8894266144537608	0.72830707893845	0.7269511174477922	0.8441283913575421	1.1171042252304355	0.9782389539962588	0.9524924842423858	1.1130550094361167	1.0001372958666053	1.0	10.037946871965051	-7.6091904757312365	5.412727781216575	1.0254727977056564	0.777513219009188	0.7509940328083231	0.06541532314327088	0.09720692428586084	4.669146747069189	0.019424330238010566	0.02528423300252057	2.459288756537584e-08	7.6091904757312365	-0.24795957869646834	
NIDEHANEDVER	ddPTM_K562_Methotrexat_30min_R1	2	NIDEHANEDVER	12	0	P61026	P61026	RAB10	Ras-related protein Rab-10	0	;	174.46	0.00026818	20039600.0	12741.0	11833.7	14732.0	14968.900000000001	11268.400000000001	10617.2	11378.8	13089.0	14376.0	15741.099999999999	False	True	12180.92089564264	13789.017786492353	11639.954524691848	13656.59977771653	12750.392111716394	12668.823637136788	13930.78555481831	12628.652451084168	13707.662897828077	12890.234255622343	0.9449728107407883	1.0697259268564485	0.9030056625708598	1.0594531881187434	0.9891513108968556	0.9828233828730473	1.0807240022610225	0.9797069782169334	1.0634145684240917	1.0	13.653990861740382	-8.039350965086742	0.9184399487063017	1.026222892480206	0.9878640303948337	0.08239000288521614	0.05390118629419562	1.6536405468556918	3.040899182912555	0.02815040250487263	0.03279265044599194	9.133748203090999e-09	8.039350965086742	-0.0383588620853722	
NIEDYIHR	ddPTM_K562_Methotrexat_30min_R1	2	NIEDYIHR	8	0	Q9BUQ8	Q9BUQ8	DDX23	Probable ATP-dependent RNA helicase DDX23	0	;	152.06	2.9038e-12	10300500.0	7428.200000000001	7662.7	9158.4	8686.4	7196.8	7287.2	6799.1	8471.5	8801.1	10188.8	False	True	7101.665222275541	8928.830931370148	7236.176996941203	7924.876798506031	8143.305345000229	8695.348265883955	8323.971250550603	8173.552543308092	8391.938782002973	8343.509588509369	0.8511604315833605	1.070152893893342	0.8672821574876383	0.9498253360216813	0.9760047925413953	1.0421691464056249	0.9976582590633475	0.9796300293781239	1.005804415154062	1.0	13.026438646856041	-7.883531238424918	3.441850850076346	1.0037267661821727	0.9392152785711255	0.25149447334935937	0.056889278395506684	0.36905908234048174	8.542509098773335	0.01756833814550773	0.020336300241523036	1.3075814823371088e-08	7.883531238424918	-0.06451148761104719	
NIGRDT(ph)PTSAGPNSFNK	ddPTM_K562_Methotrexat_30min_R1	1	NIGRDTPTSAGPNSFNK	17	1	Q8WW12;Q8WW12-3	Q8WW12	PCNP	PEST proteolytic signal-containing nuclear protein	1	NIGRDT(0.997)PT(0.003)SAGPNSFNK	109.32	0.0049552	29306000.0	1670.7	1202.2	2643.6	1993.7	1350.9	1100.8	1181.0	1072.3	1294.7	1825.9	True	False	1597.2580284396954	1400.8431160939604	2088.7444869315345	1818.915416418938	1528.5670284794357	1313.514020623156	1445.8693131297166	1034.5866012145739	1234.5096795922382	1495.211816667248	1.0682486659314285	0.9368860655585034	1.396955577563078	1.2164934734619801	1.0223080177941175	0.8784802300124358	0.966999656511869	0.6919331359490024	0.825642003247338	1.0	10.546134160529729	-8.106986048948734	2.614243394882153	0.8553027659325532	1.1550846759207174	0.49172742971470995	0.1342780210202513	0.2511507164523259	3.3521369441419737	0.05084373566744626	0.0518669951122028	7.816529135988622e-09	8.106986048948734	0.29978190998816423	
NIGS(ph)DFIPR	ddPTM_K562_Methotrexat_30min_R1	1	NIGSDFIPR	9	0	Q5T853;Q5T857;P41279-2;P41279	Q5T853	MAP3K8	Mitogen-activated protein kinase kinase kinase 8	1	NIGS(1)DFIPR	96.604	0.0094308	4343800.0	1543.9	1415.9	2152.9	1780.5	1395.9	1503.7	1447.9	1614.5	1909.9	2385.2	True	False	1476.0320046136617	1649.8534088150386	1701.03571111927	1624.406329404584	1579.4853172362461	1794.2687434693314	1772.6284322442982	1557.717119892688	1821.1091658710252	1953.2171669394377	0.7556927256207288	0.8446850850692911	0.8708891872912834	0.8316567952092708	0.8086583222648996	0.9186222473565662	0.9075429308364568	0.7975135311418177	0.9323638951651152	1.0	10.931636647736562	-15.999999999913234	0.07800358250435101	1.4941463979544727	0.6979781899586003	0.575770912841014	0.04543133932331822	207.241620954218	1.146362358010646	17.731512353482724	1.7494870181233826	1.0000000001997864e-16	15.999999999913234	-0.7961682079958724	
NIIS(ph)PPWDFR	ddPTM_K562_Methotrexat_30min_R1	2	NIISPPWDFR	10	0	Q5T8C6;Q13042-4;Q13042-3;Q13042-2;Q13042	Q5T8C6	CDC16	Cell division cycle protein 16 homolog	1	NIIS(1)PPWDFR;NIIS(1)PPWDFR	113.52	0.00011809	4509100.0	3726.7	3561.7000000000003	4640.2	3361.2000000000003	3278.1	3248.38	3035.98	4609.799999999999	3764.8999999999996	4029.1000000000004	True	False	3562.878730224585	4150.210386451389	3666.2854320849247	3066.5288145996574	3709.227608304419	3876.0834614024757	3716.8757978624535	4447.670721140487	3589.8706207591053	3299.390947222746	1.0798595217167668	1.2578716656614513	1.1112006702846207	0.9294226915367214	1.1242158530581687	1.1747875663734724	1.1265339140822714	1.3480278003685204	1.0880403923581319	1.0	11.687984018673678	-8.007682829817385	24.814384865462397	1.165874131192811	1.0973609332077023	0.035287186019892114	0.11083508716990513	967.0465117224134	3123425.288392743	0.03580141817947232	0.038871513537551625	9.824651865439845e-09	8.007682829817385	-0.06851319798510858	
NINMDNDLEVLTS(ph)SPTR	ddPTM_K562_Methotrexat_30min_R1	1	NINMDNDLEVLTSSPTR	17	0	Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5	Q9Y5T5-4	USP16	Ubiquitin carboxyl-terminal hydrolase 16	1	NINMDNDLEVLT(0.026)S(0.589)S(0.365)PT(0.02)R	185.96	1.1867000000000001e-08	24756000.0	1374.7	1318.4	1441.0	1716.4	1449.4	1290.0	1225.6	1424.9	1712.3	1824.4	True	False	1314.2698340193024	1536.2431910316739	1138.5537924301493	1565.9258768829152	1640.0215049804542	1539.2742429177597	1500.4719984519743	1374.7854593589914	1632.6955467411665	1493.9834812025451	0.879708410806131	1.028286597784276	0.7620926246879909	1.0481547464115613	1.0977507620501663	1.030315436740143	1.004343098388348	0.9202146319933817	1.092847121326247	1.0	10.544948481170147	-7.339793899085977	24.999902560930238	1.0263960621058472	0.9038444919712354	0.4007243648466102	0.07656091760398828	117.976131087731	37640.70772601261	0.02122512212188365	0.0314819500641047	4.5730515910132185e-08	7.339793899085977	-0.12255157013461182	
NINMDNDLEVLTSS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	5	NINMDNDLEVLTSSPTR	17	0	Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5	Q9Y5T5-4	USP16	Ubiquitin carboxyl-terminal hydrolase 16	1	NINMDNDLEVLT(0.004)S(0.208)S(0.661)PT(0.126)R;NINMDNDLEVLT(0.01)S(0.336)S(0.621)PT(0.033)R;NINMDNDLEVLT(0.003)S(0.222)S(0.754)PT(0.02)R;NINMDNDLEVLTS(0.005)S(0.98)PT(0.015)R;NINMDNDLEVLTS(0.22)S(0.753)PT(0.026)R	250.38	3.574999999999999e-79	351555000.0	11028.3	9373.7	12807.800000000001	11771.5	9978.9	10094.0	9629.3	12033.1	11603.900000000001	13039.5	True	False	10543.50913691356	10922.54459934283	10119.617808942994	10739.510871432789	11291.300259451811	12044.522641869664	11788.915645148156	11609.889052573995	11064.437221765951	10677.920194661587	0.9874122436487937	1.0229093681373964	0.9477143136921257	1.0057680405592462	1.0574437768411946	1.1279839540186214	1.1040460529984115	1.0872799984381176	1.036197781970463	1.0	13.382343051196239	-7.7792894666457615	3.459197586156576	1.079647856630249	0.9882837006445983	0.5039411078070105	0.03772471672544127	0.17598401107849165	4.420293011683651	0.011858818354019104	0.0145032527457757	1.6623043193408227e-08	7.7792894666457615	-0.09136415598565073	
NINMDNDLEVLTSSPT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	NINMDNDLEVLTSSPTR	17	0	Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5	Q9Y5T5-4	USP16	Ubiquitin carboxyl-terminal hydrolase 16	1	NINMDNDLEVLT(0.001)S(0.126)S(0.426)PT(0.447)R	124.98	0.0024094	13750000.0	2033.7	1534.2	2220.5	1902.2	1778.4	1319.8	1374.1	1703.8	1867.8	1883.8	True	False	1944.3009830836222	1787.7004730588528	1754.4473949279288	1735.4370793560238	2012.2907716691323	1574.832671165008	1682.2769036168875	1643.8763882769658	1780.9663856819197	1542.6255656047767	1.2603842607271785	1.1588686930376368	1.137312536526068	1.1249891860022796	1.3044583316497975	1.0208781095544754	1.0905283440945446	1.065635384846286	1.154503351552911	1.0	10.59117221034306	-8.283839340433175	24.943279444937016	1.07192495618162	1.187733875401821	0.5061606057372391	0.06418638059125271	746.2630031028891	830991.769375266	0.022337005857214983	0.019715348404705155	5.201883954458795e-09	8.283839340433175	0.11580891922020098	
NIPSPGQLDPDT(ph)RIPVINLEDGTR	ddPTM_K562_Methotrexat_30min_R1	4	NIPSPGQLDPDTRIPVINLEDGTR	24	1	Q9P2D1	Q9P2D1	CHD7	Chromodomain-helicase-DNA-binding protein 7	1	NIPS(0.003)PGQLDPDT(0.994)RIPVINLEDGT(0.003)R;NIPS(0.135)PGQLDPDT(0.862)RIPVINLEDGT(0.003)R;NIPS(0.012)PGQLDPDT(0.987)RIPVINLEDGT(0.001)R;NIPS(0.001)PGQLDPDT(0.999)RIPVINLEDGTR	99.87299999999999	1.2907e-05	266287000.0	7985.84	6303.620000000001	8970.6	8066.0	7101.77	6195.719999999999	6387.070000000001	7249.48	7335.49	8083.18	True	False	7634.792035574824	7345.186061780245	7087.7936505023545	7358.866303272892	8035.777234321123	7392.955203356915	7819.533034556668	6994.511679355623	6994.464671006461	6619.2377743843435	1.1534246533823809	1.1096724898152526	1.0707869836510884	1.1117392295153412	1.214003410697621	1.1168892031597302	1.1813343622157408	1.056694428839457	1.0566873270626718	1.0	12.692449380481909	-9.419394806784856	5.260269124745698	1.0366978108291711	1.134322705448097	0.5635105028215115	0.04023074311025954	0.1847747294686165	7.520443817913569	0.024340303648384916	0.01116698772795642	3.8071956292887626e-10	9.419394806784856	0.09762489461892598	
NIS(ph)AGSLGSLLGHHHGQGAESDPHVTEPLMGGVPETR	ddPTM_K562_Methotrexat_30min_R1	1	NISAGSLGSLLGHHHGQGAESDPHVTEPLMGGVPETR	37	0	P04920-2;P04920-3;P04920	P04920-2	SLC4A2	Anion exchange protein 2	1	NIS(0.871)AGS(0.118)LGS(0.009)LLGHHHGQGAES(0.002)DPHVTEPLMGGVPETR	42.94	0.006219	48880000.0	653.45	525.6	793.71	691.97	723.39	670.87	535.34	593.81	669.72	631.85	True	False	624.7251204189376	612.4464663275545	627.1211176889195	631.3060644527327	818.5284645286396	800.5061328265413	655.4036224308742	572.9253657252881	638.5848633787856	517.4158422483164	1.2073946512815157	1.1836639242940523	1.2120253507583052	1.2201135197359467	1.5819547792968702	1.5471233531391666	1.266686423018983	1.1072822262955215	1.2341811193951	1.0	9.015180416938437	-9.144833626717475	4.666223041163741	1.1292411278999326	1.3264758766626594	0.30341867252926835	0.14214421655327936	0.34676978576604517	11.720368559439741	0.07899382319137946	0.044306568975149806	7.164178091743265e-10	9.144833626717475	0.19723474876272684	
NIS(ph)PGLQNGEKEDR	ddPTM_K562_Methotrexat_30min_R1	1	NISPGLQNGEKEDR	14	1	Q9Y2I7	Q9Y2I7	PIKFYVE	1-phosphatidylinositol 3-phosphate 5-kinase	1	NIS(1)PGLQNGEKEDR	137.39	1.2882e-13	0.0	973.17	797.56	1385.6	1045.2	704.24	573.53	851.3	809.77	911.85	1076.3	True	False	930.3906120408561	929.343233797953	1094.781495344354	953.5689387776878	796.8599038687969	684.3565554578475	1042.2256953999388	781.2899301179945	869.4582925281392	881.3716404397612	1.0556166880711488	1.0544283377829768	1.242133789099581	1.0819147054719207	0.9041133924744877	0.7764676375522898	1.1825042326979336	0.886447775569644	0.9864831730849907	1.0	9.783606666086975	-7.645573541342644	5.675123324059831	0.9532551666548128	1.1186736326999547	0.3244725443877682	0.10843110423912453	0.24827441545777476	11.370900203728247	0.03254335859215996	0.042134188847606446	2.2616555294521635e-08	7.645573541342644	0.16541846604514188	
NIS(ph)SSPSVESLPGGR	ddPTM_K562_Methotrexat_30min_R1	1	NISSSPSVESLPGGR	15	0	C9J3F6;Q92609;Q92609-2	C9J3F6	TBC1D5	TBC1 domain family member 5	1	NIS(0.88)S(0.049)S(0.049)PS(0.023)VESLPGGR	151.38	8.433600000000001e-10	47337000.0	817.93	645.83	1030.5	760.45	611.32	640.39	654.93	569.75	795.36	1002.5	True	False	781.9747765617285	752.5424302669791	814.2121326157305	693.7825291747914	691.719295173624	764.136304203182	801.8147241727738	549.7115695626256	758.3838872020406	820.9375355763826	0.9525387044371186	0.9166865902149508	0.9918076556751299	0.8451100103343243	0.8425967448156283	0.9308093138495364	0.9767061310088805	0.6696143686214464	0.9238021826710324	1.0	9.681128642542038	-7.267365898145987	24.53655945077917	0.8744017838992001	0.9499785441516202	0.10761223803839493	0.08862016781459102	764.2777126553259	3164213.8171159136	0.02462451992794551	0.03764356695578054	5.4029892301362914e-08	7.267365898145987	0.0755767602524201	
NISSSPS(ph)VESLPGGR	ddPTM_K562_Methotrexat_30min_R1	1	NISSSPSVESLPGGR	15	0	C9J3F6;Q92609;Q92609-2	C9J3F6	TBC1D5	TBC1 domain family member 5	1	NISSS(0.229)PS(0.756)VES(0.015)LPGGR	163.91	3.6729e-09	46254000.0	1818.8	1608.5	2373.6	2464.1	1710.3	1611.1	1807.5	1653.6	1818.3	1691.7	True	False	1738.8477297696277	1874.2772851747932	1875.4137971632204	2248.076178762054	1935.2344280171596	1922.4222734610892	2212.877886098191	1595.4419507305984	1733.767629877629	1385.316737091837	1.2551986727742495	1.3529593882691546	1.3537797869245647	1.622788578647644	1.3969617028375416	1.3877131647862606	1.5973804595356538	1.1516802677775138	1.2515315692476847	1.0	10.436000154646921	-9.289349091927829	23.56833705448479	1.1512042238548805	1.4236364452327506	0.5503545948244755	0.11959330862885084	302.71567356072796	255625.22481413593	0.06583076415947778	0.031638796726696054	5.136306221875767e-10	9.289349091927829	0.27243222137787004	
NITSS(ph)SPERHIFGEDR	ddPTM_K562_Methotrexat_30min_R1	1	NITSSSPERHIFGEDR	16	1	A6NF31;O75665-3;O75665	A6NF31	OFD1	Oral-facial-digital syndrome 1 protein	1	NITS(0.004)S(0.63)S(0.366)PERHIFGEDR	93.427	0.014398	24382000.0	782.17	608.56	902.35	975.92	810.56	816.86	682.93	632.18	952.56	1073.6	True	False	747.7867433439138	709.1141962486615	712.9590663423626	890.3626088135481	917.1628474382202	974.706634162637	836.0944369311413	609.9458710769646	908.2756935138503	879.160636603296	0.8505689543074231	0.8065809213073712	0.810954263258344	1.0127416671582703	1.043225559986112	1.1086786573253442	0.9510144132037756	0.6937820526559707	1.0331168795534824	1.0	9.779982982512577	-7.254015572917138	24.20695868469818	0.9718490993992078	0.8210893152010627	0.31492819682480844	0.10439012297897816	517.192063709883	1686410.7873525228	0.03117205610915721	0.052583603813333386	5.57165769742021e-08	7.254015572917138	-0.15075978419814517	
NITSSS(ph)PERHIFGEDR	ddPTM_K562_Methotrexat_30min_R1	1	NITSSSPERHIFGEDR	16	1	A6NF31;O75665-3;O75665	A6NF31	OFD1	Oral-facial-digital syndrome 1 protein	1	NIT(0.1)S(0.157)S(0.157)S(0.586)PERHIFGEDR	74.793	0.023163999999999997	47099000.0	671.83	487.31	782.53	652.85	490.7	430.35	441.13	623.04	568.19	827.88	True	False	642.2971576265278	567.8296946462717	618.2876469051802	595.6156541150149	555.2356509548151	513.5090468524481	540.0646317535237	601.1273300575662	541.7749709179836	677.9429096787785	0.9474207170790527	0.8375774516401677	0.9120054772726157	0.8785631439042976	0.8190006017142295	0.7574517551865214	0.7966225828800482	0.8866931440324246	0.7991454194493844	1.0	9.40501997730863	-6.25787871764042	23.569513768418535	0.8472348557448873	0.9474207990221651	0.144401777715507	0.0662544200131151	286.1962962588536	1894257.9843767881	0.01624609231770267	0.11420724678214206	5.522316355865087e-07	6.25787871764042	0.10018594327727781	
NKPGPNIES(ph)GNEDDDASFK	ddPTM_K562_Methotrexat_30min_R1	4	NKPGPNIESGNEDDDASFK	19	1	A0A087WUT6;O60841	A0A087WUT6	EIF5B	Eukaryotic translation initiation factor 5B	1	NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(0.999)GNEDDDAS(0.001)FK;NKPGPNIES(0.999)GNEDDDAS(0.001)FK;NKPGPNIES(0.996)GNEDDDAS(0.004)FK	139.51	3.7936e-09	1469610000.0	15614.9	10275.4	28073.700000000004	16633.0	9072.3	8036.6	7291.18	12541.300000000001	11572.599999999999	19290.5	True	False	14928.487692753342	11973.235198063454	22181.41401981005	15174.810714398465	10265.46646863128	9589.55920979293	8926.412716769799	12100.215370523494	11034.592351934132	15796.803521233118	0.9450321815225063	0.7579530366361618	1.404171039412823	0.9606254008288064	0.6498445368921032	0.6070569401526845	0.5650771502457095	0.7659913826401087	0.6985332404180437	1.0	13.947345038546375	-7.686071062427804	5.2514676851093975	0.690119127882254	1.0333109427902645	0.3852886623208477	0.18677296989712663	0.20143845662752594	9.872876801175865	0.05608176607610099	0.07221116712090461	2.06029276557195e-08	7.686071062427804	0.34319181490801043	
NKQDDDLNCEPLS(ph)PHNITPEPVSK	ddPTM_K562_Methotrexat_30min_R1	1	NKQDDDLNCEPLSPHNITPEPVSK	24	1	F8WE35;F5H8I0;F5H2W9;F5H2H9;F5GZ10;F5H502;F5H1K9;A8MV73;Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4	F8WE35	ATF7IP	Activating transcription factor 7-interacting protein 1	1	NKQDDDLNCEPLS(0.987)PHNIT(0.013)PEPVS(0.001)K	67.979	0.0028829	18089000.0	5061.9	3553.7	8448.4	5232.0	3101.6	2660.9	2323.4	4158.4	4261.1	6667.2	True	False	4839.384936947924	4140.8885224281385	6675.196294217114	4773.318683204039	3509.51476462493	3175.0812658758655	2844.481593671111	4012.1467149964424	4063.0023910639393	5459.705473511078	0.8863820512713056	0.7584454037893692	1.222629375632669	0.8742813520551264	0.642802946358936	0.5815480855662357	0.5209954286859829	0.7348650461938332	0.7441797750403313	1.0	12.414607411014941	-7.652798238578277	4.883739602314058	0.6761924539879599	0.9522541634422145	0.32646097793242557	0.16224886129322266	0.22429637085025567	8.68802018299081	0.048594096084227656	0.06302051562129346	2.2243430200092913e-08	7.652798238578277	0.27606170945425457	
NLAANDLSPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	NLAANDLSPSR	11	0	Q96CB9-4;Q96CB9	Q96CB9-4	NSUN4	5-methylcytosine rRNA methyltransferase NSUN4	1	NLAANDLS(0.101)PS(0.899)R;NLAANDLS(0.003)PS(0.997)R	135.94	0.00011091	34216000.0	3805.7	3308.2	4494.299999999999	4957.5	3334.2	3404.0	3342.0	3249.1000000000004	3658.8999999999996	4736.6	True	False	3638.405984816513	3854.8238202146376	3551.0078482434546	4522.883672015294	3772.7057416212424	4061.774823947332	4091.528572802297	3134.8273113925893	3488.798537622644	3878.7558414075725	0.9380342907833461	0.9938299748240276	0.915501772587681	1.1660655779699638	0.9726587328198918	1.0471849711667707	1.0548559229027188	0.8082043416929752	0.8994633022213082	1.0	11.921378249116923	-9.249393438191891	24.986538629856764	0.8903753619746473	1.0138321072862324	0.2860177853021869	0.07895069965839223	817.419498904516	1695553.9769477986	0.03680318775623026	0.02104394902251288	5.631272736490069e-10	9.249393438191891	0.12345674531158513	
NLATS(ph)ADTPPST(ph)VPGTGK	ddPTM_K562_Methotrexat_30min_R1	1	NLATSADTPPSTVPGTGK	18	0	J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2;Q96Q15	J3KRA9	SMG1	Serine/threonine-protein kinase SMG1	2	NLAT(0.201)S(0.799)ADT(0.123)PPS(0.273)T(0.605)VPGTGK	108.47	0.011314	19534000.0	2278.8	1761.2	3909.4	2634.2	1807.2	2209.6	1945.2	2551.7	2370.3	3689.1	True	False	2178.626680558077	2052.208364718584	3088.870365112021	2403.263775859341	2044.8784764734903	2636.5739280240955	2381.460616342019	2461.9552646826705	2260.1052703618443	3020.9682418901084	0.7211683493882051	0.6793213964522159	1.022476940432657	0.7955276531989318	0.6768950590470575	0.8727579096874214	0.7883103778846834	0.8149556921996359	0.7481393677107243	1.0	11.560795302389485	-12.22114122529036	4.224871849081423	1.0001008184092337	0.7943795078597966	0.2960854391550013	0.09652571345762384	159213777.99241737	119958004.5954356	183547.26861053135	0.02426604688584997	6.009782776363649e-13	12.22114122529036	-0.2057213105494371	
NLDDGIDDERLR	ddPTM_K562_Methotrexat_30min_R1	2	NLDDGIDDERLR	12	1	H0YAP2;H0YAR2;A0A087WTT1;E7EQV3;E7ERJ7;P11940-2;Q9H361;P11940	H0YAP2	PABPC1;PABPC3	Polyadenylate-binding protein;Polyadenylate-binding protein 1;Polyadenylate-binding protein 3	0	;	232.78	7.036199999999999e-45	146420000.0	11580.5	9472.3	12838.5	12072.4	9602.0	8837.5	8986.9	10424.3	11307.9	12719.2	False	True	11071.435086099176	11037.436573429392	10143.874298483319	11014.031435610174	10864.831303175326	10545.221799833877	11002.441092434767	10057.671460450509	10782.198197158461	10415.62962843204	1.062963592318697	1.0596994101345516	0.9739088908070523	1.0574522931906727	1.0431276543779051	1.0124420871349038	1.0563395094619032	0.9656325944036647	1.0351940863686033	1.0	13.346462432980871	-9.246404211545364	24.965120057702084	1.0003100002874445	1.03632425497311	0.2472506853747395	0.030058106764984906	1126.1226021516034	1869873.3426262974	0.013911102349434008	0.007986811751250466	5.670166195233424e-10	9.246404211545364	0.03601425468566544	
NLDIERPTYTNLNR	ddPTM_K562_Methotrexat_30min_R1	2	NLDIERPTYTNLNR	14	1	P68363;Q71U36;Q9BQE3;Q71U36-2;F5H5D3;F8VVB9;F8VQQ4;P68366;P0DPH8;P0DPH7;P68366-2;P0DPH7-2;Q9NY65-2;Q9NY65;Q6PEY2;C9J2C0;C9JDS9	P68363	TUBA1B;TUBA1A;TUBA1C;TUBA4A;TUBA8;TUBA3E	Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-8 chain;Tubulin alpha-3E chain	0	;	116.98	0.0040591	307340000.0	3893.9	3077.1000000000004	3892.1000000000004	4178.1	3178.0	2971.7	3201.3999999999996	4266.3	4501.1	4858.0	False	True	3722.728818424211	3585.538473242994	3075.2013986935335	3811.812459918727	3595.962703758717	3545.9389671927947	3919.3954437370644	4116.251810838139	4291.844843448383	3978.16912501752	0.9357894803951594	0.9013036803022303	0.7730192714418571	0.9581826061509991	0.9039240391125605	0.8913494765452382	0.9852259470541749	1.0347101094702733	1.0788492667288199	1.0	11.95788889583562	-8.935431788454464	2.3241345290096342	1.043218703562695	0.8907444733314835	0.6397405775521243	0.049093997937600595	0.19318987781210464	2.099826509409171	0.02643365133526054	0.015201558448456892	1.1602944410330438e-09	8.935431788454464	-0.15247423023121143	
NLDLKGDLYMAGLAQGMY(ph)SNLPK	ddPTM_K562_Methotrexat_30min_R1	1	NLDLKGDLYMAGLAQGMYSNLPK	23	1	A0A0A0MR89;A0A0U1RRJ0;A0A0U1RQC5;Q9Y4C0-3;Q9Y4C0-4;Q9Y4C0	A0A0A0MR89	NRXN3	Neurexin-3	1	NLDLKGDLY(0.016)MAGLAQGMY(0.762)S(0.222)NLPK	40.81	0.032619	0.0	212.19	220.82	332.74	327.25	250.21	210.43	158.32	271.7	236.33	224.7	True	False	202.86238166913208	257.3067517017704	262.90242116114354	298.5605005884025	283.11700066314296	251.09261933115062	193.8272901394553	262.144156998974	225.34306988339657	184.00465261248186	1.1024850664856014	1.3983709001297076	1.4287813782340724	1.6225703880280566	1.5386404454641374	1.36459929554041	1.0533825497753047	1.4246604815534516	1.2246596305256172	1.0	7.5235984354923	-8.539731526320775	21.542023926354165	1.210767365577243	1.4312753669263236	0.31884823514603244	0.16506033851673885	65.80651650010644	84113.1951237279	0.06460852873833405	0.05007451190003009	2.8858149149723077e-09	8.539731526320775	0.22050800134908055	
NLDPDPEPPS(ph)PDS(ph)PTETFAAPAEVR	ddPTM_K562_Methotrexat_30min_R1	1	NLDPDPEPPSPDSPTETFAAPAEVR	25	0	Q9BUA3;H0YGY5	Q9BUA3	C11orf84	Uncharacterized protein C11orf84	2	NLDPDPEPPS(0.998)PDS(0.933)PT(0.052)ET(0.018)FAAPAEVR	71.765	0.0027404	5368100.0	841.46	936.89	1234.1	1240.3	1051.2	1156.5	1070.5	913.66	1253.4	923.43	True	False	804.470425935755	1091.6951480928878	975.0792749743558	1131.5648246899793	1189.4512253590824	1379.977257313481	1310.5868752797307	881.5260599325821	1195.1297075777486	756.1878787803477	1.0638499353272919	1.4436824216935062	1.2894669464248187	1.496406986204375	1.5729572752178247	1.8249132206922447	1.733149805830756	1.1657500532200964	1.5804666288824523	1.0	9.5626009137843	-5.576082187208826	0.963886458663957	1.5067533123915733	7.707069589128425e-09	0.18427981893805767	0.23936629626708733	10.422504917365544	3.0018012384166157	0.07800905806869958	22.414667315488888	2.6541032438756094e-06	5.576082187208826	-1.5067533046845036	
NLEELEEKST(ph)TPPPAEPVSLPQEPPKPR	ddPTM_K562_Methotrexat_30min_R1	1	NLEELEEKSTTPPPAEPVSLPQEPPKPR	28	2	Q9UN86-2	Q9UN86-2	G3BP2	Ras GTPase-activating protein-binding protein 2	1	NLEELEEKS(0.14)T(0.489)T(0.371)PPPAEPVSLPQEPPKPR	54.56	0.0082057	63335000.0	4284.6	2473.0	6619.7	4493.8	3028.8	2361.9	2035.3	3141.1	3987.2	5823.5	True	False	4096.254114235179	2881.6212161872922	5230.315433552988	4099.835531074598	3427.1402885916946	2818.3037475561705	2491.7678348966224	3030.6257326075724	3801.835942280195	4768.807719131233	0.8589681856540491	0.6042645008786929	1.0967763310251122	0.859719194512102	0.7186576793278721	0.5909870796949642	0.5225137983442463	0.6355101549700735	0.7972298667082349	1.0	12.219412898334122	-7.845842546177034	4.4650007627683195	0.6733633094917794	0.854295209409509	0.1356530528030898	0.16575122608359497	0.35229185913931477	12.806212489948544	0.05218468388780126	0.060496962082052956	1.426124542516692e-08	7.845842546177034	0.18093189991772962	
NLEY(ph)TASLLEAVY(ph)IDETRVS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	NLEYTASLLEAVYIDETRVSR	21	1	F8VZK3	F8VZK3	PDE1B		3	NLEY(0.898)T(0.058)AS(0.045)LLEAVY(0.952)IDET(0.222)RVS(0.825)R	46.57	0.026691000000000003	10820000.0	174.57	62.193000000000005	270.05	162.49	180.48	139.5	184.44	198.74	179.64	310.1	True	False	166.89611182421592	72.46933614975184	213.37019545160433	148.244753982	204.21628344064595	166.45640068761833	225.80536504118956	191.75020155309562	171.28857560975482	253.93788506956224	0.6572320304963452	0.2853821363830766	0.8402456190936416	0.5837835262012626	0.804197780038627	0.6555004608391546	0.8892149549852861	0.7551067124173643	0.6745294250317673	1.0	7.988331836925015	-5.952933182976967	0.12992918433706405	1.0652135850471383	6.069708855846961e-20	0.37771375377987637	0.14697406916434239	38.22440303960697	0.7486903886297626	1.0632854976822737	7.207052919861717	1.1144659830905038e-06	5.952933182976967	-1.0652135850471383	
NLFASFPTEESSINYTFKT(ph)PEK	ddPTM_K562_Methotrexat_30min_R1	1	NLFASFPTEESSINYTFKTPEK	22	1	P49792	P49792	RANBP2	E3 SUMO-protein ligase RanBP2	1	NLFASFPTEESSINY(0.024)T(0.02)FKT(0.956)PEK	104.26	0.00026101	5417200.0	2220.6	1255.7	3501.4	2052.1	1214.7	1253.1	1261.3	1822.7	1873.9	2441.2	True	False	2122.985082871364	1463.1830817494485	2766.503989462127	1872.1955790907873	1374.4543411754914	1495.2438401552283	1544.178632218892	1758.594607883805	1786.7827980133573	1999.0750242883441	1.0619836959981683	0.7319300496339955	1.3838920279877849	0.9365309237242234	0.6875451518708193	0.7479678461229958	0.7724465632642318	0.8797041564309732	0.8938047728596072	1.0	10.965116901385784	-7.524001042884335	24.99956054598442	0.8167545250465758	1.0488141894015894	0.2715733693447274	0.1672525986385382	47.784061207535906	1064382.8803098577	0.04866509589869693	0.06334979102596056	2.992257451202203e-08	7.524001042884335	0.23205966435501368	
NLGS(ph)INTELQDVQR	ddPTM_K562_Methotrexat_30min_R1	2	NLGSINTELQDVQR	14	0	A0A087X1A9;O75396	A0A087X1A9	SEC22B	Vesicle-trafficking protein SEC22b	1	NLGS(1)INTELQDVQR;NLGS(1)INTELQDVQR	191.93	4.6806e-08	32335000.0	895.02	802.5	1198.79	1009.0999999999999	810.03	694.74	741.0799999999999	889.4	835.13	1269.99	True	False	855.6759924666885	935.0994848323105	947.1803614346545	920.633769728822	916.5631431484175	828.9886724997557	907.2860546775361	858.1192978832806	796.3049885825798	1039.9825045452865	0.8227792186185068	0.8991492460165624	0.910765668936702	0.8852396705763358	0.8813255407110604	0.7971179023460746	0.872405113270853	0.8251285902722736	0.765690754510096	1.0	10.022343543011088	-8.053713943289585	24.844867621143433	0.8420557638277882	0.8831426535061069	0.03439885229878348	0.06218713993791529	736.0410042848264	340446.6975900308	0.019397834995586213	0.019397964511372563	8.836617501858429e-09	8.053713943289585	0.04108688967831864	
NLLEDDS(ph)DEEEDFFLR	ddPTM_K562_Methotrexat_30min_R1	5	NLLEDDSDEEEDFFLR	16	0	O75379	O75379	VAMP4	Vesicle-associated membrane protein 4	1	NLLEDDS(1)DEEEDFFLR;NLLEDDS(1)DEEEDFFLR;NLLEDDS(1)DEEEDFFLR;NLLEDDS(1)DEEEDFFLR;NLLEDDS(1)DEEEDFFLR	218.37	4.3357999999999994e-30	123838200.0	10302.509999999998	8008.85	11581.72	8903.91	8217.4	7411.549999999999	7435.9400000000005	9730.73	10345.029999999999	10623.91	True	False	9849.623996277149	9332.17633532616	9150.875245568426	8123.318034512093	9298.13213400468	8843.727143486149	9103.63883173056	9388.494710469728	9864.091813294262	8699.816951207269	1.1321645100717115	1.0726865160112522	1.05184687182396	0.9337343624666521	1.068773307088304	1.0165417494512812	1.0464172847300255	1.079160028667832	1.1338275125346664	1.0	13.086769330869002	-9.246852942117899	5.899220311818653	1.0800540691520617	1.0425772115749399	0.030406300779954654	0.056157224751945345	0.46098884288899145	65.04983282537238	0.028908159816945722	0.015481248865027854	5.664310576510864e-10	9.246852942117899	-0.037476857577121825	
NLLEDDS(ph)DEEEDFFLRGPSGPR	ddPTM_K562_Methotrexat_30min_R1	2	NLLEDDSDEEEDFFLRGPSGPR	22	1	O75379	O75379	VAMP4	Vesicle-associated membrane protein 4	1	NLLEDDS(0.999)DEEEDFFLRGPS(0.001)GPR;NLLEDDS(1)DEEEDFFLRGPSGPR	77.554	0.0019799	93331000.0	1029.04	1223.5900000000001	1604.51	1563.45	1017.95	827.36	1208.79	1352.24	1284.56	1393.1599999999999	True	False	983.8046337377057	1425.767450026126	1267.7452779265086	1426.384765912721	1151.8282675554383	987.2356105584792	1479.891928042397	1304.6809527430723	1224.841085978995	1140.845224003583	0.8623471554583252	1.249746608941975	1.1112333656248246	1.250287712917875	1.0096271109531512	0.8653545544889606	1.2971890462485287	1.1436090762290596	1.0736259925607121	1.0	10.155887362258236	-12.118056176456912	12.207535088120954	0.9999999999982958	1.1034149807399838	0.036214928727483886	0.1437635687705653	0.0	0.0	0.1371350355137958	0.033260131552718196	7.619804406634795e-13	12.118056176456912	0.10341498074168798	
NLLEENFEEHSMS(ph)PEREMGNENIPSTVSTISR	ddPTM_K562_Methotrexat_30min_R1	1	NLLEENFEEHSMSPEREMGNENIPSTVSTISR	32	1	P38398-8;P38398-4;P38398;P38398-7;Q5YLB2	P38398-8	BRCA1	Breast cancer type 1 susceptibility protein	1	NLLEENFEEHS(0.213)MS(0.784)PEREMGNENIPS(0.002)T(0.001)VSTISR	57.919	0.00056696	19244000.0	685.31	520.7	753.87	675.61	530.8	674.94	602.71	585.96	600.91	962.08	True	False	655.1845929670246	606.7368246133134	595.642989243106	616.3803202521943	600.6095038247723	805.3626027247386	737.883059878418	565.3514546747102	572.9738252597293	787.8379892541906	0.8316235087714636	0.7701289261104085	0.7560475597362007	0.7823693813441172	0.7623515392972371	1.0222439304902493	0.9365923831331584	0.7175986210183924	0.7272736693011426	1.0	9.621755174621098														
NLLLSTS(ph)EEQIEK	ddPTM_K562_Methotrexat_30min_R1	1	NLLLSTSEEQIEK	13	0	P17181-4;P17181-3;P17181	P17181-4	IFNAR1	Interferon alpha/beta receptor 1	1	NLLLST(0.203)S(0.797)EEQIEK	124.3	0.00089173	8060900.0	2582.3	2115.7	4392.8	3275.9	2502.6	2276.6	1944.4	3116.3	2516.1	3565.6	True	False	2468.785183958714	2465.283464248871	3470.811311163883	2988.706933162866	2831.735765395393	2716.5207297880397	2380.481195977495	3006.6979626643474	2399.127060185395	2919.8352886295756	0.8455220722801243	0.844322785552041	1.188701062926364	1.0235875101590457	0.9698272284134452	0.930367798610667	0.8152792745698932	1.029749169199041	0.8216652047216763	1.0	11.511671271925048	-8.273050728657932	4.146972695052467	0.9138508099132814	0.982484819675705	0.05684208312674732	0.11014832958745438	0.648908411634829	27.158328973162245	0.04077522960788656	0.037682579238358556	5.332726018492339e-09	8.273050728657932	0.06863400976242362	
NLLS(ph)DS(ph)EPSGEEK	ddPTM_K562_Methotrexat_30min_R1	1	NLLSDSEPSGEEK	13	0	D6RIE9;A1A519-4;A1A519-3;A1A519-2;A1A519	D6RIE9	FAM170A	Protein FAM170A	2	NLLS(1)DS(1)EPSGEEK	105.95	0.0054424	9334400.0	63.852	0.0	126.42	134.59	52.288000000000004	142.38	154.34	0.0	0.0	124.13	True	False	61.04514253422604	0.0	99.88616963151938	122.79070366445556	59.16478850035736	169.8929199276207	188.95467382594452	0.0	0.0	101.64885415570706	0.6005492441726523	0.0	0.9826590812180964	1.207989058847266	0.5820507175587829	1.6713707334799515	1.8588962501879387	0.0	0.0	1.0	6.667450142161537	-6.776289686989841	24.7531967027711	0.9367574063124574	0.30027465355699773	0.1443939842962616	0.5942092029747721	368.3328683145836	613956.6179809894	0.1681972820141635	0.3525027500074864	1.673826013179173e-07	6.776289686989841	-0.6364827527554597	
NLNNSNLFS(ph)PVNR	ddPTM_K562_Methotrexat_30min_R1	4	NLNNSNLFSPVNR	13	0	P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3;H0YEN4	P52948-6	NUP98	Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96	1	NLNNSNLFS(1)PVNR;NLNNSNLFS(1)PVNR;NLNNS(0.003)NLFS(0.997)PVNR;NLNNSNLFS(1)PVNR	198.29	1.0175000000000001e-07	186532000.0	8384.3	6342.300000000001	9380.4	7295.2	7352.5	6808.1	6269.299999999999	8118.5	8501.3	8874.8	True	False	8015.736211077354	7390.257274332664	7411.582230750704	6655.641142528687	8319.48262409879	8123.66897147938	7675.350114144056	7832.967753390397	8106.076418566073	7267.487721429707	1.102958342460116	1.0168929838768004	1.0198272793631429	0.9158104420187925	1.1447535851442936	1.117809796571798	1.0561215110844537	1.0778095613829872	1.1153890765668049	1.0	12.827241013562652	-7.784385803311721	24.999868917379917	1.0893695529645648	1.0145132853675565	0.2791146495291813	0.05601602959986866	300.0224846470773	326869.2319701345	0.017351103592284697	0.01968700416081102	1.6429116025329053e-08	7.784385803311721	-0.07485626759700836	
NLNNSNLFS(ph)PVNRDS(ph)ENLASPSEYPENGER	ddPTM_K562_Methotrexat_30min_R1	2	NLNNSNLFSPVNRDSENLASPSEYPENGER	30	1	P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3	P52948-6	NUP98	Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96	2	NLNNS(0.109)NLFS(0.746)PVNRDS(0.695)ENLAS(0.332)PS(0.105)EY(0.013)PENGER;NLNNS(0.219)NLFS(0.795)PVNRDS(0.336)ENLAS(0.431)PS(0.103)EY(0.116)PENGER	70.983	0.00016044	59491000.0	2632.6	2089.04	2240.8	2775.5	2502.51	2113.32	1875.84	2508.21	2556.6000000000004	2802.6	True	False	2516.8740561862337	2434.218352391387	1770.4867023438424	2532.1762242417453	2831.6339288178815	2521.6891806534586	2296.544870737721	2419.9948326330373	2437.7442240252676	2295.021982250741	1.0966666444379418	1.0606514321941853	0.7714465116397343	1.103334191927184	1.2338156020801518	1.0987647177916893	1.0006635616123756	1.0544538794612044	1.0621877449882018	1.0	11.164292256833741	-6.324517742754142	5.807877113043048	1.0440350677147208	1.096400161987714	0.02174116783458968	0.11012214477976422	0.9871479028725326	65.05080439905934	0.02945609117629565	0.12737285700201925	4.736769560856626e-07	6.324517742754142	0.052365094272993185	
NLNNSNLFS(ph)PVNRDSENLASPSEYPENGER	ddPTM_K562_Methotrexat_30min_R1	1	NLNNSNLFSPVNRDSENLASPSEYPENGER	30	1	P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3	P52948-6	NUP98	Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96	1	NLNNS(0.065)NLFS(0.933)PVNRDS(0.002)ENLASPSEYPENGER	81.53399999999999	4.9095e-05	20587000.0	0.0	0.0	0.0	141.52	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	129.1131613239747	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
NLNNSNLFSPVNRDSENLASPSEY(ph)PENGER	ddPTM_K562_Methotrexat_30min_R1	1	NLNNSNLFSPVNRDSENLASPSEYPENGER	30	1	P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3	P52948-6	NUP98	Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96	1	NLNNS(0.001)NLFS(0.002)PVNRDS(0.021)ENLAS(0.19)PS(0.076)EY(0.711)PENGER	51.619	0.020672	40761000.0	174.06	198.38	106.89	168.24	167.67	230.4	129.78	0.0	241.34	248.97	True	False	166.40853081355922	231.1589231165529	84.45524973827798	153.49066040945098	189.72154390787406	274.9215392001954	158.88646863503354	0.0	230.1201560769218	203.87912043137354	0.8162117359613239	1.1338038079988766	0.4142417799310937	0.7528512977919998	0.9305589680122984	1.3484536259451592	0.7793170202954417	0.0	1.1287087936715967	1.0	7.6715702241163655	-9.005515239557683	24.99734679899207	0.6165443493612489	0.8978162471998838	0.03600670350843771	0.36205417394336764	560.6983467823735	2541315.612921755	0.15388246676313933	0.10020875191409857	9.873809875665364e-10	9.005515239557683	0.28127189783863493	
NLQDGQISDTGDLGEDIAS(ph)N	ddPTM_K562_Methotrexat_30min_R1	1	NLQDGQISDTGDLGEDIASN	20	0	A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YI78;H0YHT2;Q7Z4S6-3	A0A1B0GV47	KIF21A	Kinesin-like protein KIF21A	1	NLQDGQISDTGDLGEDIAS(1)N	165.03	6.6742e-45	0.0	417.91	632.22	610.69	543.18	525.82	320.13	405.62	507.6	553.43	688.54	True	False	399.5391767913051	736.6836090974246	482.5145145726355	495.56025274135516	594.9745465356856	381.9905917715215	496.5906103231803	489.7474202895813	527.7011600963405	563.8387339109846	0.7086054092452292	1.306550197407558	0.8557668807634843	0.8789042379262847	1.0552211310647852	0.6774819975951276	0.8807316355842607	0.8685948496168758	0.9359079615478327	1.0	9.139138779605403														
NLQPLMRS(ph)PISR	ddPTM_K562_Methotrexat_30min_R1	1	NLQPLMRSPISR	12	1	A0A2R8Y880;Q7Z6E9-2;Q7Z6E9;H3BSK8;Q7Z6E9-4	A0A2R8Y880	RBBP6	E3 ubiquitin-protein ligase RBBP6	1	NLQPLMRS(1)PISR	91.12299999999999	0.012076	9165300.0	2498.2	1963.7	2766.2	2819.1	2133.9	2259.7	2291.0	2292.0	2493.2	2427.5	True	False	2388.3821192602186	2288.168047807112	2185.612422359664	2571.9538799351117	2414.5452528479295	2696.3550439699716	2804.8150689078584	2211.3890608820343	2377.291676187044	1987.8562270440586	1.201486348342074	1.1510732097610585	1.0994821419301881	1.2938329467416292	1.2146478301594061	1.356413510839992	1.410974813343829	1.112449195669633	1.195907251160752	1.0	10.95699770150631	-10.178935492501305	1.5254251726970078	1.0027325681205534	1.237256538425162	0.3511385007444846	0.0946425240682356	0.8333903382022337	3.7713164833	0.09810032757624766	0.028579474136498233	6.623148726765438e-11	10.178935492501305	0.23452397030460848	
NLQS(ph)PTQFQTPR	ddPTM_K562_Methotrexat_30min_R1	1	NLQSPTQFQTPR	12	0	O75385	O75385	ULK1	Serine/threonine-protein kinase ULK1	1	NLQS(0.516)PT(0.484)QFQTPR	120.87	0.0012679	18694000.0	1291.9	805.04	1629.2	1862.0	1135.8	1224.5	1016.1	1240.1	1615.1	1546.3	True	False	1235.109622877383	938.059176659692	1287.253184335322	1698.7613509414991	1285.1776082218853	1461.1172949246502	1243.9862904920456	1196.4849801046284	1540.0143535254676	1266.2500860466441	0.9754073357921855	0.7408166735754419	1.016586848459179	1.3415685966468103	1.0149476966547222	1.1538931456158084	0.9824175367884015	0.9449041648953966	1.216200788845387	1.0	10.306346651725272	-6.969800795402686	10.310937250837368	1.0929032895152115	0.86278149224305	0.35536436538530836	0.12535457507645406	0.4541369919385433	149.38960591644795	0.03233402073641413	0.06712271627462997	1.0720109083817177e-07	6.969800795402686	-0.23012179727216153	
NLRDIDEVSSLLR	ddPTM_K562_Methotrexat_30min_R1	2	NLRDIDEVSSLLR	13	1	H7C4C8;P50990-2;P50990;P50990-3	H7C4C8	CCT8	T-complex protein 1 subunit theta	0	;	164.48	2.0866999999999998e-07	70472000.0	4104.0	4210.4	4937.0	5361.7	4014.9	4046.8999999999996	3944.7	4387.2	4412.0	5762.9	False	True	3923.593073990846	4906.0970354367055	3900.791168096907	4891.648085576278	4542.929722882591	4828.9061501270435	4829.399389926158	4232.899689311365	4206.887083000659	4719.182966357243	0.8314136370557983	1.0396072944007388	0.8265818884127615	1.0365455462202946	0.9626517461325085	1.023250461902412	1.0233549799519623	0.8969560450373381	0.8914439454861767	1.0	12.20432139161875	-6.2382227356359214	23.782795068453485	0.9647036340025719	0.831413345254301	0.2554041990978724	0.06922709844850775	4903.03906033591	5022457.271055684	0.016968062380824697	0.8727732726179835	5.777996366000083e-07	6.2382227356359214	-0.13329028874827087	
NLS(ph)FEIK	ddPTM_K562_Methotrexat_30min_R1	1	NLSFEIK	7	0	Q05209-2;Q05209-3;Q05209	Q05209-2	PTPN12	Tyrosine-protein phosphatase non-receptor type 12	1	NLS(1)FEIK	86.882	0.023997	7644200.0	2532.9	2067.0	3911.1	3434.8	1920.7	1702.1	1680.8	1978.0	2445.9	2955.8	True	False	2421.556748808824	2408.5366170073335	3090.2135583438944	3133.676416871032	2173.3057158934434	2031.0067355583863	2057.7621858665784	1908.4326188589264	2332.1906428629445	2420.475977712389	1.0004465118044494	0.9950673500522242	1.2766966442957552	1.2946529714509682	0.8978836129361019	0.8390939444389391	0.8501477415245351	0.7884534432201228	0.9635256306353085	1.0	11.241075060741796	-7.860719350333054	7.837592896031718	0.8726401595512191	1.1402681786356759	0.564313522737832	0.10793196816329802	0.18098872288906348	12.622457946417379	0.03589914992422849	0.0408038882428582	1.3780997364613794e-08	7.860719350333054	0.26762801908445677	
NLS(ph)NEELTK	ddPTM_K562_Methotrexat_30min_R1	4	NLSNEELTK	9	0	Q0JRZ9-3;Q0JRZ9	Q0JRZ9-3	FCHO2	F-BAR domain only protein 2	1	NLS(1)NEELTK;NLS(1)NEELTK;NLS(1)NEELTK;NLS(1)NEELTK	136.27	0.0001382	109801000.0	6986.5	4847.02	9932.7	7801.1	4482.85	4558.889999999999	4643.1	5922.32	6052.799999999999	8011.999999999999	True	False	6679.381825398893	5647.907669746919	7847.962008376775	7117.189674989108	5072.423350077015	5439.830971546782	5684.4333681563	5714.02864879707	5771.406649135629	6560.949162132642	1.0180511478354077	0.8608369810795884	1.1961626000201757	1.084780494271603	0.7731234040576256	0.8291225609464348	0.8664041174049534	0.8709149404443365	0.8796603214739174	1.0	12.679688827012463	-7.753118677779139	24.998973754077838	0.8612058790941588	1.0383209651547303	0.44079334348067933	0.09354008404747081	174.91466552654	525516.3794860067	0.028473298249868027	0.03614219151710836	1.7655552890838218e-08	7.753118677779139	0.17711508606057147	
NLS(ph)PGAVESDVR	ddPTM_K562_Methotrexat_30min_R1	3	NLSPGAVESDVR	12	0	A0A3B3IU78;A0A3B3ISK1;A0A3B3ITV3;A0A3B3ISC6;A0A3B3IT15;A0A3B3IS84;P53621;P53621-2	A0A3B3IU78	COPA	Coatomer subunit alpha;Xenin;Proxenin	1	NLS(0.991)PGAVES(0.009)DVR;NLS(0.956)PGAVES(0.044)DVR;NLS(1)PGAVESDVR	119.62	0.0012997	219639000.0	6829.5	5200.5	7699.8	6521.6	5382.6	5786.9	5067.5	6545.2	6034.0	7148.299999999999	True	False	6529.2833574124	6059.794231614241	6083.7172039928255	5949.861453437207	6090.506245831236	6905.136524295182	6204.015871536699	6315.0016061453225	5753.480657032182	5853.67360155676	1.1154163695898527	1.0352121836794357	1.0392990142762464	1.0164320490734	1.0404588059388025	1.179624453686449	1.0598499837583644	1.0788099979585253	0.9828837493607548	1.0	12.515126588566662	-9.762058233275608	24.999999992689876	0.991441840394451	1.0688728394447229	0.32999991851828214	0.045082047534919095	20.56991559863454	830653.6455384686	0.037797678462935684	0.012000711510472913	1.7295844287536084e-10	9.762058233275608	0.07743099905027184	
NLSELQDT(ph)SLQQLVSQR	ddPTM_K562_Methotrexat_30min_R1	2	NLSELQDTSLQQLVSQR	17	0	Q5QJE6;J3KP30	Q5QJE6	DNTTIP2	Deoxynucleotidyltransferase terminal-interacting protein 2	1	NLSELQDT(0.724)S(0.276)LQQLVSQR;NLSELQDT(0.5)S(0.5)LQQLVSQR	218.64	4.5335e-30	56247000.0	5758.5	5062.7	4796.3	5892.5	4395.9	4390.3	4850.6	5490.3	6164.299999999999	7356.3	True	False	5505.363235033209	5899.225123813751	3789.6221753176405	5375.913673696442	4974.0379010235765	5238.663340063447	5938.470525204918	5297.203037068339	5877.723038472568	6024.002785995553	0.9139044968292406	0.9792865862426423	0.6290870555584166	0.8924155357620731	0.825703120952582	0.8696316263734403	0.9858014240980303	0.8793493670658886	0.9757171846163398	1.0	12.556506721893216	-8.629599896323048	5.427167723069008	0.9496299428313429	0.8458776536975283	0.2563725606581113	0.09030029868970657	0.33216157646291977	14.700409115901877	0.035533839943697215	0.0272378597183609	2.3463894846059017e-09	8.629599896323048	-0.10375228913381462	
NLSES(ph)PVITK	ddPTM_K562_Methotrexat_30min_R1	1	NLSESPVITK	10	0	F5GXF5;E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-4;Q12830-2;Q12830	F5GXF5	BPTF	Nucleosome-remodeling factor subunit BPTF	1	NLS(0.003)ES(0.929)PVIT(0.067)K	107.99	0.0034551	5644700.0	3371.4	2792.4	4867.1	3585.0	2532.7	2408.2	2301.8	2828.5	3316.0	3647.4	True	False	3223.197292800375	3253.7966373155655	3845.5622228568895	3270.708616071575	2865.79444298606	2873.5505672825975	2818.0372438289432	2729.0200517909393	3161.839883778374	2986.820515971368	1.0791399334392657	1.0893847219531945	1.2875103148292937	1.095046923168693	0.959479964618514	0.9620767474700659	0.9434906546141982	0.9136873264389684	1.0585972162944268	1.0	11.54439483048019	-7.656571025826721	4.267313142646245	0.96655702804553	1.1519649183233363	0.6195641989835949	0.06410488885274489	0.13957190713636747	4.536852501990872	0.019670211543854565	0.025576284720933706	2.2051034776422356e-08	7.656571025826721	0.18540789027780624	
NLSFNELYPS(ph)GTLK	ddPTM_K562_Methotrexat_30min_R1	2	NLSFNELYPSGTLK	14	0	Q8WYP5;Q8WYP5-3;Q8WYP5-2	Q8WYP5	AHCTF1	Protein ELYS	1	NLS(0.18)FNELY(0.141)PS(0.677)GT(0.001)LK;NLS(0.054)FNELY(0.006)PS(0.94)GTLK	206.49	2.9006e-13	79709000.0	9918.900000000001	7024.3	13814.900000000001	11154.7	6919.5	6848.5	6251.1	8114.200000000001	9300.2	11498.5	True	False	9482.877032555512	8184.946182314757	10915.341281778808	10176.78476978901	7829.53553450549	8171.875699707199	7653.068300851124	7828.818986827659	8867.835731940786	9416.01022725689	1.007101394718653	0.8692584210052657	1.1592320970703438	1.080795849215401	0.8315130661010787	0.8678703083872779	0.8127718764256958	0.8314369672374902	0.9417827209098306	1.0	13.200900172031306	-7.765161700021697	24.999865446789745	0.8684101873010395	1.026975278460196	0.4109794706733929	0.08612889535996993	92.71780070882816	622712.0692850057	0.026990737844295773	0.03178595113259113	1.71726888072189e-08	7.765161700021697	0.1585650911591565	
NLSPGAVES(ph)DVR	ddPTM_K562_Methotrexat_30min_R1	1	NLSPGAVESDVR	12	0	A0A3B3IU78;A0A3B3ISK1;A0A3B3ITV3;A0A3B3ISC6;A0A3B3IT15;A0A3B3IS84;P53621;P53621-2	A0A3B3IU78	COPA	Coatomer subunit alpha;Xenin;Proxenin	1	NLS(0.046)PGAVES(0.954)DVR	142.1	1.8368000000000001e-06	42549000.0	1354.7	1080.1	1578.2	1292.6	1200.2	1090.0	1039.3	1184.7	1342.8	1429.4	True	False	1295.1490100719782	1258.5681664391002	1246.9573873790848	1179.2797648909673	1358.04733702052	1300.6270734731463	1272.3894810632632	1143.0334295056475	1280.3735210909529	1170.5218088308043	1.1064714901516102	1.0752197498107638	1.0653004309459466	1.0074820955868486	1.1602067785281411	1.1111515083792414	1.0870275730566792	0.976516132277267	1.0938484968254252	1.0	10.192936099247799	-9.217587207085733	23.02482319755542	1.02638674519128	1.0868438696244203	0.2905950673646863	0.045815077319580615	241.96258164709147	127043.74386165122	0.02173236604539896	0.012546999804382923	6.059165192218701e-10	9.217587207085733	0.06045712443314022	
NLSS(ph)DEATNPISR	ddPTM_K562_Methotrexat_30min_R1	1	NLSSDEATNPISR	13	0	Q7Z417	Q7Z417	NUFIP2	Nuclear fragile X mental retardation-interacting protein 2	1	NLS(0.281)S(0.719)DEATNPISR	209.6	2.1791e-17	65656000.0	1908.8	1128.7	2091.4	1757.2	1393.2	1243.0	1166.2	1269.2	1639.5	1748.8	True	False	1824.8914375325855	1315.198490380347	1652.4437206720413	1603.1490042290022	1576.4302199108379	1483.1921580982753	1427.750036386009	1224.5615166105918	1563.2800028512204	1432.0753737815232	1.274298455893279	0.9183863604242056	1.1538804108533867	1.119458537992832	1.1008011510931388	1.035694199657783	0.9969796719678987	0.8550957156514936	1.0916185219519834	1.0	10.483891711984297	-8.518506848166549	2.30964802980941	0.9731683653930395	1.105531348278159	0.2731293390638577	0.09752501639078281	0.40182526354989956	4.302314002011023	0.03978022340921865	0.030984950675248694	3.030352513339804e-09	8.518506848166549	0.1323629828851195	
NLTANDPSQEYVAS(ph)EGEEDPEVEFLK	ddPTM_K562_Methotrexat_30min_R1	1	NLTANDPSQEYVASEGEEDPEVEFLK	26	0	Q86X95	Q86X95	CIR1	Corepressor interacting with RBPJ 1	1	NLTANDPSQEY(0.006)VAS(0.994)EGEEDPEVEFLK	120.27	3.2120999999999997e-10	6362200.0	1454.0	1268.7	2135.5	1778.4	988.46	1142.2	1065.4	1319.8	1665.5	2169.0	True	False	1390.0839009704414	1478.3311107872303	1687.2877333342008	1622.4904331441255	1118.4598156568095	1362.9139846981911	1304.3430704558853	1273.3818859302387	1588.0712685262004	1776.1730819602717	0.7826286272936175	0.8323125295625309	0.9499568203522302	0.9134754093635208	0.6297020414375509	0.7673317417883692	0.7343558371103949	0.7169244365109239	0.8940971376356672	1.0	10.794556458872028	-6.2304735052377005	20.283321660290362	0.8133191841936391	0.7826279786111809	0.0014320090925368234	0.1103602844682191	7979.654390937783	5225717.680335613	0.028321266190700745	2.0453738290723393	5.882019971610998e-07	6.2304735052377005	-0.030691205582458192	
NLVS(ph)PAYCTQESR	ddPTM_K562_Methotrexat_30min_R1	1	NLVSPAYCTQESR	13	0	Q9NUQ3	Q9NUQ3	TXLNG	Gamma-taxilin	1	NLVS(0.837)PAYCT(0.158)QES(0.005)R	84.62	0.027801999999999997	23541000.0	2205.1	1771.1	3161.7	2372.0	2061.4	1902.1	1917.7	2662.4	2677.4	2673.9	True	False	2108.1664443121867	2063.7441714473584	2498.1023771869527	2164.0504427675796	2332.510232073069	2269.653905003003	2347.7930413114796	2568.761882937313	2552.9282583921054	2189.630799379242	0.9627953922231317	0.9425078291885681	1.1408783516815537	0.9883175023757821	1.0652527507077143	1.0365463920431002	1.0722323790737125	1.1731484064188147	1.1659172218055471	1.0	11.09647191759012	-5.313449084470684	0.40629096980904933	1.105242178638869	0.6561369442913493	0.30242941301863757	0.06629593042670748	13.800372415751632	0.9905569413414147	0.05070584785381593	3.515870108351341	4.859044937481034e-06	5.313449084470684	-0.4491052343475198	
NLVSPAYCT(ph)QESR	ddPTM_K562_Methotrexat_30min_R1	1	NLVSPAYCTQESR	13	0	Q9NUQ3	Q9NUQ3	TXLNG	Gamma-taxilin	1	NLVS(0.484)PAYCT(0.493)QES(0.022)R	125.47	0.0018847000000000002	61143000.0	1211.0	1037.9	1450.5	1142.0	1266.2	948.49	825.29	1387.9	1298.1	1204.7	True	False	1157.7658900104575	1209.395333716454	1146.0598722553302	1041.8826330693835	1432.7274938638413	1131.7722687326102	1010.3822907983262	1339.0867703307918	1237.7516143343512	986.5171562183216	1.1735892099926517	1.225924279261909	1.161723204742423	1.0561221632103164	1.452308745806313	1.1472403308940964	1.0241913021274645	1.3573882237020565	1.2546681084382785	1.0	9.9462003304102	-13.366774465345218	1.8740199517940337	6.814506508099922e-05	1.2054225277992805	0.20459681041760902	0.12179302923461338	2050727.152679487	209085.6297268052	8673581.242029473	0.030629436833512765	4.297595484309936e-14	13.366774465345218	1.2053543827341995	
NLVSPAYCTQES(ph)REEIPGGEAR	ddPTM_K562_Methotrexat_30min_R1	1	NLVSPAYCTQESREEIPGGEAR	22	1	Q9NUQ3	Q9NUQ3	TXLNG	Gamma-taxilin	1	NLVS(0.001)PAY(0.002)CT(0.126)QES(0.871)REEIPGGEAR	57.227	0.016231	29565000.0	900.81	575.04	744.79	1090.4	582.3	488.48	738.01	785.5	756.47	821.33	True	False	861.2114709994379	670.0555859912416	588.4687571575641	994.8063249552144	658.8826565131218	582.8718466515255	903.5275290286723	757.8735197743613	721.3018748135783	672.579178149576	1.2804610951068003	0.9962478883671698	0.8749434658036552	1.4790917668491632	0.9796358226935651	0.8666219020564143	1.3433771939156514	1.1268168037248047	1.0724415775077216	1.0	9.393560306068109	-10.057054416618117	4.266768454016215	1.0000988053916409	1.1123521824335578	0.03476377345397952	0.19084028074176093	1.2166258563128323	62.091088659250104	0.18224284001654475	0.0477490813459897	8.768909407950698e-11	10.057054416618117	0.11225337704191696	
NLYSDDIPHALR	ddPTM_K562_Methotrexat_30min_R1	2	NLYSDDIPHALR	12	0	P60228;H0YBR5;E5RIT4	P60228	EIF3E	Eukaryotic translation initiation factor 3 subunit E	0	;	98.337	0.013297	23619800.0	7844.299999999999	7147.2	9049.4	8518.8	7131.7	6674.3	6404.1	8138.799999999999	8443.7	9032.1	False	True	7499.473964499606	8328.153318371942	7150.054607368064	7771.970030290244	8069.643553932045	7964.014015120937	7840.3824455664835	7852.553790884244	8051.154229993809	7396.299167161539	1.013949516509033	1.1259892454523333	0.9667070579179972	1.050791734438843	1.0910380139516331	1.0767566096406656	1.0600412812365145	1.0616868806157014	1.0885382064776028	1.0	12.852587865035803	-7.527895344090575	24.90584265864277	1.0670226162650145	1.0386187931822293	0.06786544225078028	0.04372312613499579	343.59361589157385	1705826.3162043542	0.012369018261439288	0.01601373096741516	2.965545938125947e-08	7.527895344090575	-0.028403823082785218	
NMAS(ph)LY(ph)GQLDT(ph)TK	ddPTM_K562_Methotrexat_30min_R1	1	NMASLYGQLDTTK	13	0	Q9Y2I2-2;Q9Y2I2-1;Q9Y2I2-5;Q9Y2I2-4;Q9Y2I2-6;Q9Y2I2	Q9Y2I2-2	NTNG1	Netrin-G1	3	NMAS(1)LY(1)GQLDT(0.711)T(0.289)K	100.4	0.0020517	16551000.0	2192.8	1468.0	4440.1	2139.8	2470.0	2416.0	1574.2	2365.0	2464.5	3582.8	True	False	2096.4071375845833	1710.562048266457	3508.1836875566287	1952.2070562538222	2794.848293984904	2882.8578068909364	1927.254422293649	2281.8216095052394	2349.9259329227375	2933.9202019581658	0.7145412939947695	0.5830295067755382	1.1957324828450298	0.6653920086002593	0.9525986058242342	0.9825958473467856	0.6568871304023044	0.7777381293404978	0.8009508681777858	1.0	11.518613917157776														
NMGGPY(ph)GGGNYGPGGSGGSGGYGGR	ddPTM_K562_Methotrexat_30min_R1	1	NMGGPYGGGNYGPGGSGGSGGYGGR	25	0	P22626;P22626-2	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	1	NMGGPY(0.998)GGGNY(0.001)GPGGS(0.001)GGSGGYGGR	87.15700000000001	0.00015339	0.0	233.79	129.71	345.3	255.38	275.01	236.3	157.06	190.64	193.89	195.02	True	False	223.51287153224175	151.1423728069769	272.8262488036991	232.99123190302885	311.17863535578493	281.96163069881175	192.28470306532878	183.93508314421933	184.8760962200811	159.69998821756224	1.3995797621960124	0.946414426788015	1.7083673696457817	1.458930802083846	1.9485200896311936	1.765570767072883	1.2040370522969344	1.1517538930162048	1.1576462733874533	1.0	7.319220396083888	-8.906021601628588	6.878923356147925	1.1281911848223944	1.5330032059278744	0.3879693502848115	0.2536063222897724	0.26942643721478055	16.685584422887594	0.11779811793678602	0.07910947393464718	1.2415905498541435e-09	8.906021601628588	0.40481202110548	
NMGGPYGGGNYGPGGS(ph)GGSGGYGGR	ddPTM_K562_Methotrexat_30min_R1	4	NMGGPYGGGNYGPGGSGGSGGYGGR	25	0	P22626;P22626-2	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	1	NMGGPYGGGNYGPGGS(0.5)GGS(0.5)GGYGGR;NMGGPYGGGNYGPGGS(0.765)GGS(0.235)GGYGGR;NMGGPYGGGNYGPGGS(0.548)GGS(0.452)GGYGGR;NMGGPYGGGNYGPGGS(0.688)GGS(0.312)GGYGGR	215.43	9.422599999999999e-43	308520000.0	6780.21	5703.99	8575.07	7778.8	6062.5	6488.75	5966.8099999999995	6645.58	6997.24	8031.6	True	False	6482.1600867942225	6646.477396247534	6775.279992265092	7096.844681366123	6859.825013070234	7742.609103668696	7305.019031562683	6411.851184649402	6671.939839677141	6576.999412204764	0.9855801529745387	1.0105637813976145	1.0301475745447664	1.079039883779934	1.043002223831834	1.1772251475803603	1.1106917567921555	0.9748900346183853	1.014435219090365	1.0	12.683213825998847	-3.4682984525079728	22.70956344809133	1.0472857701782536	0.17281054625033676	0.0	0.059947713999377185	0.0	0.0	0.014828240192441987	0.0	0.0003401743373697409	3.4682984525079728	-0.8744752239279169	
NMGGPYGGGNYGPGGSGGS(ph)GGYGGR	ddPTM_K562_Methotrexat_30min_R1	4	NMGGPYGGGNYGPGGSGGSGGYGGR	25	0	P22626;P22626-2	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	1	NMGGPYGGGNYGPGGS(0.058)GGS(0.942)GGYGGR;NMGGPYGGGNYGPGGS(0.04)GGS(0.96)GGYGGR;NMGGPYGGGNYGPGGS(0.013)GGS(0.987)GGYGGR;NMGGPYGGGNYGPGGSGGS(1)GGYGGR	338.03	0.0	407658000.0	9712.1	8398.6	10797.6	11437.4	8216.5	8311.900000000001	7744.700000000001	9033.800000000001	9630.0	9757.0	True	False	9285.167712940185	9786.325898208897	8531.331317934611	10434.700899709069	9297.113768229543	9918.057038533436	9481.646121418902	8716.076133593418	9182.30340192574	7989.912752736925	1.162111277092428	1.2248351391392374	1.067762763118061	1.305984335828284	1.1636064192371613	1.2413223204641415	1.186702084847045	1.090885020065801	1.1492370049698433	1.0	12.963964034138117	-10.098452944792026	0.8630059990888498	1.0030788722664334	1.1944549606636876	0.44974972715261263	0.06287879217299742	0.6398353626914095	1.0516579351930175	0.058117435842713436	0.020491949549910023	7.971628574072069e-11	10.098452944792026	0.19137608839725417	
NMPGLSAATLASLGGTSS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	NMPGLSAATLASLGGTSSR	19	0	Q32MZ4-3;Q32MZ4-2;Q32MZ4;Q32MZ4-4;C9JTC6	Q32MZ4-3	LRRFIP1	Leucine-rich repeat flightless-interacting protein 1	1	NMPGLSAATLAS(0.003)LGGT(0.043)S(0.092)S(0.862)R	72.564	0.012528000000000001	19644000.0	1976.6	1814.2	1980.2	2036.3	2029.9	2269.5	1967.2	2641.9	2330.6	3030.7	True	False	1889.711030714014	2113.9657138726197	1564.583081034129	1857.780740559705	2296.8674299433033	2708.048755272758	2408.394676366451	2548.982879556825	2222.2509146965854	2481.81086191655	0.7614242727806849	0.8517835691315067	0.6304199506266556	0.7485585501568218	0.92548044864691	1.0911583943917058	0.9704182995260953	1.0270657279613975	0.8954150974182125	1.0	11.277177456950506	-7.855640497137514	3.864855828663109	0.9977283798404712	0.7462402888163298	0.7497876778137655	0.06794171866697515	0.11187130959461539	3.1701289417735032	0.021771586164572573	0.025358769628586558	1.3943105159957575e-08	7.855640497137514	-0.2514880910241415	
NMPNKQPES(ph)SL	ddPTM_K562_Methotrexat_30min_R1	2	NMPNKQPESSL	11	1	Q9Y6M5	Q9Y6M5	SLC30A1	Zinc transporter 1	1	NMPNKQPES(0.994)S(0.006)L;NMPNKQPES(0.967)S(0.033)L	101.35	0.008974	36005000.0	9447.099999999999	6911.8	12376.5	10663.7	7147.3	5930.6	6101.7	8176.200000000001	8149.4	10717.6	True	False	9031.816795638144	8053.8574694878025	9778.841784879756	9728.82997746233	8087.295227367737	7076.604515541139	7470.161547776113	7888.638411685729	7770.536172757384	8776.538784332604	1.0290864106658137	0.9176575945707786	1.1142025376035947	1.108504185594178	0.9214674971646833	0.8063092626188704	0.8511512033777411	0.898832513082275	0.8853759282222872	1.0	13.099436378956671	-7.923809087409969	6.156314225180503	0.877990881973824	1.0376606924363396	0.5323358502652609	0.06832000080596067	0.162818290907872	10.21779788156873	0.021945879764079596	0.024932283900427715	1.1917657841761677e-08	7.923809087409969	0.1596698104625156	
NMSVIAHVDHGK	ddPTM_K562_Methotrexat_30min_R1	1	NMSVIAHVDHGK	12	0	P13639	P13639	EEF2	Elongation factor 2	0		76.357	0.019441	9667500.0	5664.0	4057.2	7701.0	6184.2	3583.3	3676.7	3724.1	5234.6	4710.1	6369.5	False	True	5415.017341882103	4727.5833393914645	6084.665340391791	5642.040787589907	4054.5667578283865	4387.17023948506	4559.3242244084495	5050.496151000473	4491.1284790664995	5215.921828283057	1.0381707242082236	0.9063754203056489	1.1665560836050146	1.0816958101243472	0.777344233926727	0.8411111945151984	0.8741166709373898	0.9682844791910853	0.8610421373099565	1.0	12.348706532529874	-7.745617504845101	24.999993502542534	0.8824604143664079	1.04652329172808	0.47129774437671934	0.08356139598023807	222.2629281358932	351194.09885021206	0.02538952641991642	0.032666221975705866	1.7963149946223114e-08	7.745617504845101	0.16406287736167213	
NMTVEQLLTGSPT(ph)SPTVEPEKPTR	ddPTM_K562_Methotrexat_30min_R1	2	NMTVEQLLTGSPTSPTVEPEKPTR	24	1	Q9C0C9;K7ES11	Q9C0C9	UBE2O	E2/E3 hybrid ubiquitin-protein ligase UBE2O	1	NMTVEQLLT(0.021)GS(0.005)PT(0.403)S(0.403)PT(0.165)VEPEKPT(0.002)R;NMTVEQLLTGSPT(0.492)S(0.492)PT(0.016)VEPEKPTR	131.62	2.741e-12	61068000.0	4089.9	3311.51	6055.7	4729.6	3163.08	3462.13	3003.88	3903.11	4246.6	5757.0	True	False	3910.1128931079857	3858.680741454261	4784.6913260369565	4314.963311177718	3579.0804622420114	4131.137623746406	3677.5765557358955	3765.8354089961917	4049.1764928990488	4714.351513529411	0.8294063100484991	0.8184966119688962	1.0149203580398454	0.9152824728479592	0.759188289623852	0.8762896894494868	0.7800811087552249	0.7988024223880772	0.8589042376832912	1.0	12.202843618116292	-7.7119126771296544	24.99906775751079	0.8337479528470432	0.8976953754240153	0.07014613101254852	0.08045478908497274	240.81191632227828	121550.79097745927	0.023504912995430064	0.030344659298821807	1.9412761675295727e-08	7.7119126771296544	0.06394742257697217	
NMTVEQLLTGSPTS(ph)PTVEPEKPTR	ddPTM_K562_Methotrexat_30min_R1	1	NMTVEQLLTGSPTSPTVEPEKPTR	24	1	Q9C0C9;K7ES11	Q9C0C9	UBE2O	E2/E3 hybrid ubiquitin-protein ligase UBE2O	1	NMTVEQLLTGSPT(0.355)S(0.5)PT(0.145)VEPEKPTR	111.01	1.229e-07	8755800.0	2344.3	1638.6	3109.1	2612.1	1608.4	1322.1	1521.0	1850.4	2220.3	2149.1	True	False	2241.247378985563	1909.350798562272	2456.542398365424	2383.1012485468796	1819.9327919211833	1577.5771136136202	1862.1229680527522	1785.320383183295	2117.0787376215694	1759.8771647952149	1.273524893566286	1.0849341287887273	1.3958601472343528	1.3541293086919421	1.0341248970822101	0.8964131958591509	1.058098261232587	1.0144573831043717	1.202969604908715	1.0	10.781259020385345	-7.774737466169603	24.532253114798912	1.0293578649264201	1.2718671073213264	0.5692516212445439	0.1033615087248555	140.98098841009795	260079.91591033177	0.033282480105972116	0.03796792651030852	1.679819172840238e-08	7.774737466169603	0.24250924239490623	
NMTVEQLLTGSPTSPT(ph)VEPEKPTR	ddPTM_K562_Methotrexat_30min_R1	1	NMTVEQLLTGSPTSPTVEPEKPTR	24	1	Q9C0C9;K7ES11	Q9C0C9	UBE2O	E2/E3 hybrid ubiquitin-protein ligase UBE2O	1	NMTVEQLLTGSPT(0.241)S(0.241)PT(0.516)VEPEKPT(0.002)R	113.64	5.085e-08	39112000.0	3375.7	2507.4	5325.5	3665.8	2461.2	2174.7	2248.6	3308.6	3178.8	4550.5	True	False	3227.3082699490524	2921.705231487272	4207.750327263534	3344.425005521669	2784.89093973913	2594.9299969560093	2752.9057895880446	3192.2346626676667	3031.0182818319345	3726.3603547534426	0.8660751947492715	0.7840640607289278	1.1291850295412298	0.8975044512953325	0.7473488000661692	0.69637119062998	0.7387653172287447	0.8566628985829481	0.8133991330080271	1.0	11.86355148037952	-5.898356845784371	18.67575915848625	0.8442905785137222	2.592313188665038	0.0	0.12465553065488563	4093.3838422921845	764105.0303598141	0.03209490905447852	4844.026732432467	1.2636975811785392e-06	5.898356845784371	1.7480226101513159	
NNLKQNS(ph)DIIRHER	ddPTM_K562_Methotrexat_30min_R1	1	NNLKQNSDIIRHER	14	2	A0A087WUV0	A0A087WUV0			1	NNLKQNS(1)DIIRHER	68.515	0.032047000000000006	71191000.0	4295.3	4569.4	4685.5	4828.2	4837.8	4805.4	4916.1	4531.3	4805.0	4926.4	True	False	4106.483755047	5324.415683480069	3702.077581146052	4404.919202264094	5474.055496615457	5733.97554024574	6018.66056755038	4371.9316106347105	4581.616598780185	4034.1812222079725	1.017922480140705	1.3198256077762243	0.9176775601369354	1.0918991883694333	1.3569185901914982	1.4213480318336922	1.491916261574454	1.0837221656199871	1.1356992525666936	1.0	11.978060178357211	-6.238107718638566	22.82787096262131	1.213140669680631	1.0179217746355653	0.08345843960389221	0.17980353976642116	5272.515340639797	5158407.561087899	0.047922369352020974	2.233286572050792	5.779526792540351e-07	6.238107718638566	-0.19521889504506573	
NNS(ph)FTAPSTVGK	ddPTM_K562_Methotrexat_30min_R1	1	NNSFTAPSTVGK	12	0	O95453;O95453-3;O95453-2;A0A494C0W0;A0A494C0K5;A0A494C0Q6;O95453-4	O95453	PARN	Poly(A)-specific ribonuclease PARN	1	NNS(0.968)FT(0.032)APSTVGK	100.11	0.007813299999999999	3634400.0	1388.2	1143.6	1877.6	1616.7	1142.3	1002.6	874.78	1380.4	1466.8	2163.7	True	False	1327.1763901837464	1332.5604621236507	1483.5174189221696	1474.9664210886795	1292.5324721534246	1196.3382604258502	1070.9716830987413	1331.8505495818322	1398.6087881562478	1771.8329633183225	0.7490414828371774	0.7520801845948312	0.8372783719656112	0.8324522974932886	0.7294888959130466	0.6751981056867375	0.6044428031709068	0.7516795189810201	0.7893570201656631	1.0	10.79102688722822	-10.227491399239735	2.6437610542196293	0.9998964158734044	0.7413202389122227	0.5928370482772134	0.06406117055816549	0.9107449481939536	9.280230406563236	0.07093101496045567	0.019098759241550068	5.922548157639233e-11	10.227491399239735	-0.25857617696118174	
NNS(ph)GEEFDCAFR	ddPTM_K562_Methotrexat_30min_R1	1	NNSGEEFDCAFR	12	0	Q08J23-3;Q08J23-2;Q08J23	Q08J23-3	NSUN2	tRNA (cytosine(34)-C(5))-methyltransferase	1	NNS(1)GEEFDCAFR	160.63	2.2746999999999998e-05	9401700.0	393.85	530.16	722.88	687.35	554.86	650.01	390.38	635.17	752.73	708.62	True	False	376.5368255826744	617.7599288208069	571.1573667396984	627.0910926797198	627.8338155467466	775.6152330534679	477.9326523789828	612.830711082217	717.735746597254	580.2820513318064	0.6488858732033569	1.064585622462361	0.9842754319711149	1.080666016190716	1.0819459504318703	1.3366176521802664	0.8236212912015436	1.0560911020351365	1.2368739390611467	1.0	9.180610495445142	-5.897414289265287	1.7235498196412309	1.0811811607697746	7.232495581359982e-11	0.47877375977665493	0.1320942254264512	2.6515799408378826	3.413958651806871	0.03572640112169481	6.416495944484948	1.2664431833391491e-06	5.897414289265287	-1.0811811606974495	
NNS(ph)PPTVGAFGHTR	ddPTM_K562_Methotrexat_30min_R1	2	NNSPPTVGAFGHTR	14	0	F5H1D4;Q86XL3-3;Q86XL3	F5H1D4	ANKLE2	Ankyrin repeat and LEM domain-containing protein 2	1	NNS(0.999)PPT(0.001)VGAFGHTR;NNS(1)PPTVGAFGHTR	100.39	0.0029468000000000003	30799000.0	2878.6	2517.0	3389.0	3307.5	2707.1	2367.2	2133.5	2688.7	2681.6000000000004	3454.3	True	False	2752.060190738319	2932.891468315172	2677.6952134252415	3017.53661022503	3063.131099856898	2824.627897546453	2611.9916846420406	2594.136897030331	2556.933001308834	2828.6927971486275	0.9729088268306987	1.0368363334723298	0.9466193063185956	1.0667600996710425	1.0828786720652692	0.9985629759420068	0.9233917826902145	0.9170797548766225	0.9039274267910137	1.0	11.465919789747032	-8.674115232878007	4.516418191835056	0.9291459903141255	1.0220765713596245	0.4447061847369016	0.04468695228265719	0.18907832284163895	6.92411770116249	0.018088860771819593	0.013607113862989037	2.1177991376208335e-09	8.674115232878007	0.092930581045499	
NNSQIASGQNQPQAAAGS(ph)HQLSMGQPHNAAGPSPHTLR	ddPTM_K562_Methotrexat_30min_R1	2	NNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLR	38	0	Q68EM7-7;Q68EM7-3;Q68EM7-2;Q68EM7-6;Q68EM7-5;Q68EM7	Q68EM7-7	ARHGAP17	Rho GTPase-activating protein 17	1	NNSQIAS(0.012)GQNQPQAAAGS(0.681)HQLS(0.276)MGQPHNAAGPS(0.026)PHT(0.004)LR;NNSQIAS(0.001)GQNQPQAAAGS(0.702)HQLS(0.078)MGQPHNAAGPS(0.194)PHT(0.025)LR	68.763	0.00022852	45480000.0	5447.4	4658.0	6106.799999999999	5919.2	4701.5	4910.799999999999	4422.6	5727.6	5925.0	6330.099999999999	True	False	5207.938818532589	5427.655327537572	4825.066134359772	5400.272926150866	5319.829657558714	5859.74259854305	5414.4806301841545	5526.157061565415	5649.548043240911	5183.657550076864	1.0046841960953545	1.0470705819401764	0.9308227034187907	1.0417881339539472	1.0262695029843996	1.130426256351784	1.0445289986611612	1.0660729433184628	1.089876788476727	1.0	12.339754696726285	-7.771314148486641	2.451598131969464	1.0684745645635287	0.999942149271947	0.30248133475344785	0.04286286428228332	0.3241151103152627	3.992993628078265	0.013601043023238196	0.017145277409336537	1.693112638228116e-08	7.771314148486641	-0.06853241529158172	
NNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPS(ph)PHTLR	ddPTM_K562_Methotrexat_30min_R1	3	NNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLR	38	0	Q68EM7-7;Q68EM7-3;Q68EM7-2;Q68EM7-6;Q68EM7-5;Q68EM7	Q68EM7-7	ARHGAP17	Rho GTPase-activating protein 17	1	NNSQIASGQNQPQAAAGS(0.007)HQLS(0.007)MGQPHNAAGPS(0.863)PHT(0.123)LR;NNSQIASGQNQPQAAAGS(0.017)HQLS(0.076)MGQPHNAAGPS(0.673)PHT(0.234)LR;NNSQIASGQNQPQAAAGS(0.026)HQLS(0.026)MGQPHNAAGPS(0.714)PHT(0.235)LR	66.41199999999999	2.2109e-05	77942000.0	8145.4	6886.8	8831.8	8352.9	7086.9	6462.7	6095.299999999999	7878.2	8432.0	10252.7	True	False	7787.337969026575	8024.726644415144	6978.125873688126	7620.614225713882	8018.951568680817	7711.52530984853	7462.326184859914	7601.119240593732	8039.99816044006	8395.836679305707	0.9275237556991817	0.9557983261149796	0.8311412120352467	0.9076658487768569	0.9551104761775743	0.9184939636636946	0.8888126901340595	0.9053438663628586	0.9576172652640175	1.0	13.035458387422759	-9.975004713357285	3.26799530123016	0.9996065601370251	0.9109537000573678	0.42050456353571153	0.03352765290090577	0.21407640146944096	5.321196207159424	0.03336261766860396	0.008887488502650817	1.0592422292583271e-10	9.975004713357285	-0.08865286007965734	
NNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPS(ph)PHTLRR	ddPTM_K562_Methotrexat_30min_R1	2	NNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRR	39	1	Q68EM7-7;Q68EM7-3;Q68EM7-2;Q68EM7-6;Q68EM7-5;Q68EM7	Q68EM7-7	ARHGAP17	Rho GTPase-activating protein 17	1	NNSQIAS(0.007)GQNQPQAAAGS(0.217)HQLS(0.217)MGQPHNAAGPS(0.508)PHT(0.051)LRR;NNSQIAS(0.002)GQNQPQAAAGS(0.067)HQLS(0.067)MGQPHNAAGPS(0.701)PHT(0.162)LRR	47.506	0.001083	150700000.0	5366.0	4610.92	5417.799999999999	5304.1	4051.33	4091.82	3787.85	5116.53	5264.16	6500.0	True	False	5130.117065066982	5372.796157760743	4280.677818617669	4839.0977881465105	4584.150906425045	4882.506304384301	4637.371784706518	4936.578739823189	5019.430350600352	5322.787013712206	0.9638028070353217	1.0093952930898242	0.8042173785255872	0.9091285778822921	0.8612313238564052	0.9172838011001222	0.8712300102859709	0.9274424708533154	0.9430079275517943	1.0	12.377966124002935	-10.02698149743586	1.7569965309480726	0.9991856276046324	0.9043863192458608	0.22700563256837014	0.05293773255636507	0.6085131945062848	4.253409790095823	0.05201102151656273	0.014875143760747694	9.39763347134151e-11	10.02698149743586	-0.0947993083587716	
NNTAAET(ph)EDDES(ph)DGEDRGGGTSGVR	ddPTM_K562_Methotrexat_30min_R1	1	NNTAAETEDDESDGEDRGGGTSGVR	25	1	A0A590UJS4;Q6KC79-2	A0A590UJS4	NIPBL	Nipped-B-like protein	2	NNT(0.017)AAET(0.928)EDDES(0.814)DGEDRGGGT(0.126)S(0.114)GVR	60.762	0.010796	9665700.0	1188.4	896.81	1045.7	1113.3	829.71	907.72	839.6	949.78	1066.1	1010.3	True	False	1136.1593589499807	1044.9926093364043	826.2218603360207	1015.6987175097578	938.8314080980632	1083.1240432413251	1027.9016725687645	916.3756990595707	1016.537243696057	827.3248799928365	1.3732928700993718	1.2630982514939626	0.9986667635852733	1.2276902847628037	1.1347796141537436	1.3091882879802956	1.2424401797002222	1.107637061594842	1.2287038239498598	1.0	9.692310158488912	-15.436348209675955	0.27265511890146177	2.5136308529784565e-11	1.2189554703512826	0.2851968790416942	0.10051179443473565	218.28555554394222	2.8268124278357925	122.06257302108914	0.12636730856410272	3.6614388919809736e-16	15.436348209675955	1.2189554703261463	
NNTAAETEDDES(ph)DGEDRGGGT(ph)SGSLRR	ddPTM_K562_Methotrexat_30min_R1	1	NNTAAETEDDESDGEDRGGGTSGSLRR	27	2	Q6KC79	Q6KC79	NIPBL	Nipped-B-like protein	2	NNTAAET(0.004)EDDES(0.993)DGEDRGGGT(0.533)S(0.364)GS(0.105)LRR	72.726	0.00084146	13802000.0	1354.9	1272.0	1503.8	1960.5	1309.5	1265.7	1371.2	1438.6	1488.9	1883.5	True	False	1295.3402183114526	1482.17637969682	1188.1729306429263	1788.6260088726133	1481.722202823172	1510.2786118302404	1678.7265047954859	1388.0036225937583	1419.6813639799825	1542.3798985118358	0.8398321448310243	0.9609671269230732	0.7703503733349574	1.159653345196192	0.9606726619380936	0.9791871725554979	1.088400144747221	0.8999103424084901	0.9204485648119255	1.0	10.590942439147147	-7.242628785469243	24.998420918473823	0.9980411410643374	0.8674416226599614	0.3797054016443149	0.08403884101217377	962.4053572647284	1278991.729576065	0.022558495336208826	0.03898774226509057	5.719673185980432e-08	7.242628785469243	-0.130599518404376	
NNTAAETEDDES(ph)DGEDRGGGTS(ph)GSLRR	ddPTM_K562_Methotrexat_30min_R1	1	NNTAAETEDDESDGEDRGGGTSGSLRR	27	2	Q6KC79	Q6KC79	NIPBL	Nipped-B-like protein	2	NNTAAET(0.011)EDDES(0.978)DGEDRGGGT(0.298)S(0.356)GS(0.357)LRR	61.903	0.0036069	8092400.0	1501.9	960.44	1144.8	1466.5	713.87	961.72	1150.3	1011.8	1560.2	1706.8	True	False	1435.8782743242828	1119.1363853113326	904.5221246176503	1337.9342218881347	807.7564176627544	1147.5587789913704	1408.2840566410785	976.2144205063005	1487.6666425425274	1397.681980769845	1.0273283150816606	0.8007088885090375	0.6471587507477476	0.9572522507238728	0.5779257576303882	0.8210442681383741	1.0075854708131773	0.6984524619603383	1.0643813564249562	1.0	10.448820421513505	-9.775474168913345	24.968343528755625	1.0321908625216973	0.8141347929968614	0.2671352396308323	0.14237833158541288	343.87280241028435	611741.9860521484	0.13073013025162233	0.03443793610381307	1.676972076188798e-10	9.775474168913345	-0.21805606952483592	
NNTAAETEDDES(ph)DGEDRGGGTSGSLRR	ddPTM_K562_Methotrexat_30min_R1	1	NNTAAETEDDESDGEDRGGGTSGSLRR	27	2	Q6KC79	Q6KC79	NIPBL	Nipped-B-like protein	1	NNTAAETEDDES(0.963)DGEDRGGGT(0.008)S(0.008)GS(0.019)LRR	65.495	0.00050616	32581000.0	2980.3	3269.7	5393.9	3924.7	2896.2	3018.8	2827.6	3746.5	3705.7	4154.9	True	False	2849.289580510457	3809.962349602749	4261.794102004841	3580.6276444898467	3277.1010643882923	3602.140375597003	3461.7612784128605	3614.733471463587	3533.4228158376113	3402.4073481958194	0.837433407854982	1.119784305551492	1.2525819708991415	1.0523806464233425	0.9631712869789172	1.058703443462493	1.017444686700584	1.0624046745550197	1.0385066966514944	1.0	11.732340160537314	-7.517645871223532	24.958733386963438	1.0261271379250392	1.087845491184937	0.034363223467773096	0.09905371642391604	658.3862360663627	3140248.975100269	0.02963648562898583	0.039449156903694264	3.0363660632709746e-08	7.517645871223532	0.06171835325989772	
NNTAAETEDDES(ph)DGEDRGGGTSGVR	ddPTM_K562_Methotrexat_30min_R1	2	NNTAAETEDDESDGEDRGGGTSGVR	25	1	A0A590UJS4;Q6KC79-2	A0A590UJS4	NIPBL	Nipped-B-like protein	1	NNTAAETEDDES(1)DGEDRGGGTSGVR;NNTAAETEDDES(1)DGEDRGGGTSGVR	147.03	2.4404e-22	70804000.0	1995.35	1926.3	3378.5	2210.1400000000003	2010.1100000000001	2438.5	1681.81	1987.36	2003.62	2620.6	True	False	1907.6368031646293	2244.588333498417	2669.3990199342525	2016.3804576637176	2274.4746980655873	2909.705613453457	2058.9987040767896	1917.463422353628	1910.4721435271476	2145.9839458668007	0.8889333989840736	1.0459483342461764	1.2439044686590306	0.9396064968460265	1.0598749829635314	1.355884147715828	0.9594660333048874	0.8935124729365721	0.890254629913121	1.0	11.067423567976938	-8.978770795386543	24.998526248947016	0.9204278108652123	1.0919641702712297	0.2525685994752599	0.12972575926447175	315.3079251921304	371291.4897860701	0.0552578320225592	0.037251329812067975	1.0500964846378372e-09	8.978770795386543	0.1715363594060174	
NNTAAETEDDESDGEDRGGGT(ph)SGVRR	ddPTM_K562_Methotrexat_30min_R1	2	NNTAAETEDDESDGEDRGGGTSGVRR	26	2	A0A590UJS4;Q6KC79-2	A0A590UJS4	NIPBL	Nipped-B-like protein	1	NNTAAETEDDES(0.001)DGEDRGGGT(0.732)S(0.267)GVRR;NNTAAETEDDES(0.096)DGEDRGGGT(0.452)S(0.452)GVRR	96.777	8.687e-07	23800000.0	3456.2799999999997	3415.54	5175.16	3950.14	3487.47	3256.84	3018.4700000000003	4179.21	3402.07	4276.34	True	False	3304.346069632817	3979.8999307466042	4088.9646387458756	3603.8373591879977	3946.1334331269372	3886.1782366699827	3695.4387346339186	4032.224815501222	3243.9085082647443	3501.8533874181603	0.943599204211413	1.1365124379695681	1.1676572906898823	1.0291228559528667	1.1268699732847283	1.1097489833905287	1.0552808258367676	1.1514544926377095	0.9263404687128854	1.0	11.773902968184414	-9.767324354856603	24.999993860152145	0.963170195576287	1.0928643536073546	0.3748208118571701	0.06545371685504704	150.6379252315589	639894.0512995931	0.05482704013103365	0.015648118218152308	1.7087386589851734e-10	9.767324354856603	0.12969415803106754	
NPDDITNEEYGEFYK	ddPTM_K562_Methotrexat_30min_R1	2	NPDDITNEEYGEFYK	15	0	P07900;P07900-2	P07900	HSP90AA1	Heat shock protein HSP 90-alpha	0	;	244.0	3.4336999999999993e-60	25489000.0	3346.71	2647.16	4584.16	3612.7400000000002	2509.84	2449.91	2047.29	3317.56	3272.7799999999997	3805.11	False	True	3199.5926356374034	3084.558195973455	3622.0074622530115	3296.0166933407013	2839.9279522976	2923.3204344702713	2506.44689760994	3200.8795343890906	3120.629172144808	3115.967706730224	1.0268375467199344	0.9899198214766709	1.162402118105969	1.0577826869712375	0.9114112274538655	0.9381741756039862	0.8043879569727982	1.0272505480321457	1.001495992851439	1.0	11.60546456633459	-7.75136168201972	24.444094353962768	0.9408986210184831	1.0616535122374755	0.3712609209284955	0.07117366253860553	169.92280257752302	412155.74881786626	0.022024630522501355	0.028083960680719788	1.772712544539812e-08	7.75136168201972	0.12075489121899241	
NPDDITQEEYGEFYK	ddPTM_K562_Methotrexat_30min_R1	3	NPDDITQEEYGEFYK	15	0	P08238	P08238	HSP90AB1	Heat shock protein HSP 90-beta	0	;;	146.77	6.962900000000001e-08	56244000.0	3463.86	2408.6800000000003	4995.6	3615.9	2524.7200000000003	2473.38	2354.65	3247.99	3208.45	4445.099999999999	False	True	3311.5928619088536	2806.67342944036	3947.09182891329	3298.89966104692	2856.764933113185	2951.3256798045986	2882.7402016603605	3133.756350721743	3059.2898598035945	3640.049316100328	0.9097659329123163	0.7710536824394502	1.0843511958628913	0.9062788370628754	0.784814898105201	0.8107927732601229	0.7919508642121116	0.860910410433398	0.8404528604247278	1.0	11.82974228113315	-7.615531164942249	8.052506525475936	0.8368202022676804	0.9211729667979586	0.11893080462568206	0.09051025142559951	0.45920689827611677	34.9972286887519	0.026402218288699052	0.03411045070092401	2.423644037784219e-08	7.615531164942249	0.08435276453027818	
NPEAALSPT(ph)FR	ddPTM_K562_Methotrexat_30min_R1	1	NPEAALSPTFR	11	0	B4E349;F5H6D8;B4DTN4;Q86U44	B4E349	METTL3	N6-adenosine-methyltransferase 70 kDa subunit	1	NPEAALS(0.193)PT(0.807)FR	98.368	0.021028	15871000.0	1428.3	988.72	1139.4	1147.8	951.92	1108.2	921.04	1039.1	1280.6	1291.6	True	False	1365.513642198131	1152.089174633523	900.2555108222846	1047.1741560744638	1077.1141651862793	1322.3439658926059	1127.606665677387	1002.5542640325133	1221.0651855146523	1057.6787241401053	1.2910476603453436	1.089261935915534	0.851161595931878	0.9900682808248963	1.0183755620705852	1.2502321694781882	1.0661145392653457	0.9478816592889223	1.1544764564564542	1.0	10.046685751926374	-9.280594684233655	0.0072462731149611935	2.0530766040897865e-07	2.1041849905398817	0.029385092465998963	0.1267250073481539	12595.932834341715	89.12542989586204	12902.968611696204	12966.589527285612	5.240893273804137e-10	9.280594684233655	2.1041847852322215	
NPEMEDLPS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	NPEMEDLPSK	10	0	O15381-3;O15381-4;O15381-2;O15381-5;O15381	O15381-3	NVL	Nuclear valosin-containing protein-like	1	NPEMEDLPS(1)K	83.499	0.024447999999999998	35282000.0	0.0	0.0	0.0	0.0	0.0	0.0	71.755	0.0	54.599	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	87.84788532059511	0.0	52.06070440724228	0.0											0.0														
NPLPPILGS(ph)PTK	ddPTM_K562_Methotrexat_30min_R1	1	NPLPPILGSPTK	12	0	O75385	O75385	ULK1	Serine/threonine-protein kinase ULK1	1	NPLPPILGS(0.948)PT(0.052)K	92.265	0.020981	0.0	2910.0	1773.4	3488.2	2406.2	1921.0	1542.4	1533.1	2478.9	2252.3	2998.8	True	False	2782.079884335616	2066.424207354042	2756.074489073452	2195.252181866504	2173.6451711518225	1840.4469707568633	1876.9367010661888	2391.715681946105	2147.591064606161	2455.68826103387	1.1329124826146832	0.8414847438673085	1.1223226224623137	0.8939457897405433	0.8851470301188376	0.7494627880747438	0.7643220562026791	0.9739492263318343	0.8745373338641947	1.0	11.261911713120252	-7.447022876594991	7.690518607186087	0.8639291634213245	1.0132092539443323	0.3079933008244361	0.10485358625272864	0.37336624057269757	33.93399278107779	0.02911226138375461	0.043159940204096185	3.572540191912895e-08	7.447022876594991	0.14928009052300772	
NPPGFAFVEFEDPRDAADAVR	ddPTM_K562_Methotrexat_30min_R1	2	NPPGFAFVEFEDPRDAADAVR	21	1	A0A087X2D0;P84103-2;P84103	A0A087X2D0	SRSF3	Serine/arginine-rich splicing factor 3	0	;	88.574	0.0031254	18040500.0	386.75	266.37	383.62	336.802	499.5	229.66	499.02000000000004	292.08	516.28	474.36	False	True	369.7489330813743	310.3831149841524	303.10340447748354	307.2750915788391	565.1930052005907	274.0385446732503	610.937937881449	281.80738084748003	492.27825548766543	388.44880735761876	0.951860132089352	0.7990322253670958	0.7802917623542517	0.7910311108149486	1.4549999755315388	0.7054688789942954	1.5727630676414959	0.7254685186561505	1.2672924878733323	1.0	8.6015806719658														
NPQMPQYS(ph)SPQPGSALSPR	ddPTM_K562_Methotrexat_30min_R1	1	NPQMPQYSSPQPGSALSPR	19	0	O14497-2;O14497;A0A087WUV6;H0Y488;A0A1B0GTU5;O14497-3	O14497-2	ARID1A	AT-rich interactive domain-containing protein 1A	1	NPQMPQY(0.049)S(0.424)S(0.424)PQPGS(0.013)ALS(0.089)PR	68.515	0.018146000000000002	115960000.0	2539.6	2031.1	2917.4	2749.5	2392.6	1856.1	2095.2	2281.2	2473.5	2811.6	True	False	2427.9622248311794	2366.704752202996	2305.0776086299215	2508.455603874141	2707.2688373231904	2214.7650560307416	2565.1019346904163	2200.968903003532	2358.5075248871567	2302.3919950389604	1.05453903160834	1.0279330180536643	1.0011664449827604	1.0894997938140825	1.175850525521558	0.9619409122351747	1.1141030459702455	0.9559488165985774	1.0243727088910621	1.0	11.168917765896685	-9.271420975844443	24.988759328740766	0.9926205749964119	1.0589034243208046	0.21914225233991103	0.05812119886814678	1144.3334662232025	2864801.334290858	0.031230550725553696	0.015308150080892882	5.352775439280952e-10	9.271420975844443	0.06628284932439277	
NPQMPQYSSPQPGS(ph)ALSPR	ddPTM_K562_Methotrexat_30min_R1	1	NPQMPQYSSPQPGSALSPR	19	0	O14497-2;O14497;A0A087WUV6;H0Y488;A0A1B0GTU5;O14497-3	O14497-2	ARID1A	AT-rich interactive domain-containing protein 1A	1	NPQMPQYSSPQPGS(0.66)ALS(0.34)PR	169.49	3.9878e-12	13928000.0	1088.0	915.9	1383.8	1224.7	800.97	914.66	768.39	961.75	1049.8	1295.6	True	False	1040.1728227344156	1067.236907361885	1093.359290745899	1117.332452469416	906.3115943453801	1091.4051000210536	940.7210173715008	927.9247073749108	1000.99502713828	1060.9542853793128	0.9804124806023407	1.0059216707723897	1.0305432626204067	1.0531391105790642	0.8542418903764126	1.028701344686924	0.8866744122110538	0.8746132799144676	0.9434855402656712	1.0	10.05114677910758	-7.74583617521876	24.99999216246476	0.9276569091390756	1.0176081825326269	0.3837131156171555	0.05341056429878639	245.70827843930326	393680.73177805106	0.015461283254857221	0.01988796906994352	1.7954107648542162e-08	7.74583617521876	0.08995127339355125	
NPQMPQYSSPQPGSALS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	5	NPQMPQYSSPQPGSALSPR	19	0	O14497-2;O14497;A0A087WUV6;H0Y488;A0A1B0GTU5;O14497-3	O14497-2	ARID1A	AT-rich interactive domain-containing protein 1A	1	NPQMPQYS(0.001)S(0.002)PQPGS(0.007)ALS(0.989)PR;NPQMPQY(0.01)S(0.177)S(0.177)PQPGS(0.24)ALS(0.397)PR;NPQMPQYS(0.004)S(0.004)PQPGS(0.007)ALS(0.985)PR;NPQMPQY(0.052)S(0.065)S(0.065)PQPGS(0.114)ALS(0.704)PR;NPQMPQYSSPQPGS(0.066)ALS(0.934)PR	267.22	3.0591999999999995e-116	203988000.0	7075.0	6024.32	9220.5	8662.9	6394.43	6410.85	5285.25	6880.1	6906.89	7895.4	True	False	6763.991471365804	7019.736484068517	7285.24305558792	7903.437007019924	7235.409626115745	7649.6560311700205	6470.601852005788	6638.122983322197	6585.790191456579	6465.4665520097415	1.046172216181873	1.0857277549269024	1.126793093272342	1.2224078407092216	1.1190854624198268	1.183156075378997	1.000794265959732	1.026704404071008	1.018610202137607	1.0	12.658538764208028	-8.773081897798104	24.993062830695592	1.0137525523311886	1.132001886084371	0.6175274068292487	0.04586980605535005	164.6378981636279	353425.74951197987	0.020520253312506	0.013965869581221218	1.6862350108567464e-09	8.773081897798104	0.11824933375318247	
NPRQPTRT(ph)SS(ph)ES(ph)IY(ph)S(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	NPRQPTRTSSESIYSR	16	2	A0A3B3IS55	A0A3B3IS55			5	NPRQPT(0.003)RT(0.711)S(0.408)S(0.927)ES(0.987)IY(0.986)S(0.979)R	52.464	0.030079	741400.0	51.466	48.7	0.0	0.0	0.0	0.0	0.0	0.0	0.0	62.858000000000004	True	False	49.20361626364837	56.74684724153708	0.0	0.0	0.0	0.0	0.0	0.0	0.0	51.473807093526446	0.9558961934610121	1.1024412307104015	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	5.6857665856468715	-11.854161213726703	13.373990464783187	1.0000014214087538	0.21404275009484397	0.2431761719173079	0.4074676040955205	0.0	0.0	0.44023560599109496	0.10677281945333576	1.3990678805250344e-12	11.854161213726703	-0.7859586713139098	
NPRQPTRTS(ph)S(ph)ES(ph)IY(ph)S(ph)R	ddPTM_K562_Methotrexat_30min_R1	3	NPRQPTRTSSESIYSR	16	2	A0A3B3IS55	A0A3B3IS55			5	NPRQPTRT(0.131)S(0.993)S(0.992)ES(0.912)IY(0.99)S(0.982)R;NPRQPT(0.001)RT(0.27)S(0.981)S(0.992)ES(0.838)IY(0.969)S(0.949)R;NPRQPT(0.001)RT(0.24)S(0.878)S(0.977)ES(0.972)IY(0.969)S(0.963)R	57.496	0.026108	20798400.0	1895.63	1363.656	2543.87	1382.1399999999999	1736.16	1288.601	1492.9799999999998	1446.8020000000001	1507.24	1875.0299999999997	True	False	1812.3003749632728	1588.976975811201	2009.9464510404446	1260.969932110785	1964.495471289405	1537.6049059674958	1827.81876978527	1395.9171536048202	1437.1687413830273	1535.4438975878136	1.1803103830823136	1.0348648871557522	1.3090328172837027	0.8212412932128437	1.2794316186841035	1.0014074160463156	1.1904171638291559	0.9091293767214873	0.9359956059878339	1.0	10.584440084406351	-9.271275342698074	24.719356339400743	0.941921853853644	1.1113882610930212	0.2423811215576288	0.13598462891254567	831.0013637054362	2088425.0728391812	0.06727567465134397	0.03297248023242891	5.354570700973227e-10	9.271275342698074	0.16946640723937723	
NPSKHYVYIINVT(ph)WSDS(ph)T(ph)S(ph)QTIY(ph)RR	ddPTM_K562_Methotrexat_30min_R1	2	NPSKHYVYIINVTWSDSTSQTIYRR	25	2	Q5TCZ1-3;Q5TCZ1	Q5TCZ1-3	SH3PXD2A	SH3 and PX domain-containing protein 2A	5	NPS(0.003)KHY(0.01)VY(0.01)IINVT(0.91)WS(0.117)DS(0.758)T(0.758)S(0.757)QT(0.757)IY(0.921)RR;NPS(0.005)KHY(0.018)VY(0.018)IINVT(0.941)WS(0.183)DS(0.735)T(0.735)S(0.735)QT(0.735)IY(0.896)RR	43.841	0.020134	867250000.0	1589.53	1858.67	1712.29	1441.65	1641.4499999999998	1782.8000000000002	1663.34	2084.28	2187.86	1690.71	True	False	1519.6561644494823	2165.7836255118623	1352.9037288273553	1315.2627828060204	1857.3294462192405	2127.30086842929	2036.386336410824	2010.9746910188508	2086.1468661409376	1384.5060356851332	1.09761613548869	1.5643006023011723	0.9771743090725211	0.9499870342964253	1.3415105448060594	1.5365053048516175	1.4708396236085046	1.4524853190861713	1.5067806223817524	1.0	10.435155627737844	-7.987117845168887	24.57892361940515	1.42784298372896	1.1625128450261006	0.225481966427036	0.2118270056585171	265.13934752015166	505877.49402367347	0.0653853918241946	0.0740943156925787	1.0301065646136126e-08	7.987117845168887	-0.26533013870285926	
NQGETPTTEVPAPFFLPAS(ph)LS(ph)ANNTPTRR	ddPTM_K562_Methotrexat_30min_R1	1	NQGETPTTEVPAPFFLPASLSANNTPTRR	29	1	Q9UJX2-3;Q9UJX2	Q9UJX2-3	CDC23	Cell division cycle protein 23 homolog	2	NQGET(0.001)PT(0.003)T(0.003)EVPAPFFLPAS(0.688)LS(0.687)ANNT(0.309)PT(0.309)RR	51.242	0.017122	8289400.0	673.22	739.56	1058.4	842.04	653.01	810.34	727.16	768.39	1066.5	867.01	True	False	643.6260548908671	861.7597196293872	836.2563038917897	768.2196605514388	738.8922609129894	966.926736438743	890.2441403348049	741.3652881724016	1016.9186477833648	709.9860875013259	0.9065333338516511	1.2137698678888238	1.1778488601584436	1.0820207241737032	1.0407137180862147	1.3618953293038116	1.2538895564388681	1.0441969233249477	1.4323078517809207	1.0	9.471646944406837	-8.234334698551608	24.92337075902837	1.2234347590394232	1.0964610535106805	0.17697645735712486	0.14337024422576508	1347.3810501417413	1238948.3662582226	0.04551700469067948	0.04550588521514961	5.829956327490498e-09	8.234334698551608	-0.12697370552874276	
NQGETPTTEVPAPFFLPAS(ph)LSANNTPTRR	ddPTM_K562_Methotrexat_30min_R1	1	NQGETPTTEVPAPFFLPASLSANNTPTRR	29	1	Q9UJX2-3;Q9UJX2	Q9UJX2-3	CDC23	Cell division cycle protein 23 homolog	1	NQGETPTTEVPAPFFLPAS(0.486)LS(0.486)ANNT(0.022)PT(0.007)RR	65.836	0.00027943	10224000.0	395.72	477.3	601.05	729.26	554.22	378.18	462.73	368.44	628.17	746.46	True	False	378.3246226217491	556.1657122871795	474.89781883424047	665.3269080491931	627.1096443288718	451.2579327028204	566.5089815956931	355.4817563662199	598.966513809729	611.2688606547094	0.6189168907058972	0.9098544815312353	0.7769049748838727	1.088435794580774	1.0259145928964806	0.7382315078499063	0.9267754634007112	0.5815473014370066	0.9798740821971468	1.0	9.255663264773304	-15.999999440356277	0.012814579477705014	1.9413151471962804	4.2503942005294485e-10	0.06243943977776589	0.16138548063291822	39466.66172685602	38.29989025196881	3516.8201792334007	2386.8305428971894	1.0000012886281251e-16	15.999999440356277	-1.941315146771241	
NQGGYGGSSSSSSYGS(ph)GR	ddPTM_K562_Methotrexat_30min_R1	4	NQGGYGGSSSSSSYGSGR	18	0	F8W6I7;P09651-3;P09651-2;P09651;A0A2R8Y4L2;H0YH80	F8W6I7	HNRNPA1	Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed	1	NQGGYGGSSSSSSYGS(1)GR;NQGGYGGSSSSSSYGS(1)GR;NQGGYGGSSSSSSYGS(1)GR;NQGGYGGSSSSSSYGS(1)GR	267.38	5.135899999999999e-116	16925600.0	3830.2599999999998	3187.25	8346.4	3934.1600000000003	4372.76	3764.54	3597.41	4398.599999999999	3777.39	4363.88	True	False	3661.8863566238256	3713.8888885131205	6594.6047003046415	3589.258300977445	4947.854585427303	4491.984076305138	4404.220766931395	4243.898744849786	3601.7799633852796	3573.5390451382195	1.0247226378023775	1.039274747414848	1.8453988096972287	1.0043987922450746	1.3845810897627753	1.257012731515123	1.2324535177314806	1.187589862946534	1.007902787094346	1.0	11.803137836170201	-9.646872501653524	2.056199883238088	0.9880499686832247	1.2664303100230918	0.15509225278012162	0.23011968828686688	0.6060294308137639	4.702137339152554	0.20647289534271346	0.06264005582566448	2.2549010993667194e-10	9.646872501653524	0.2783803413398671	
NQGGYGGSSSSSSYGS(ph)GRRF	ddPTM_K562_Methotrexat_30min_R1	1	NQGGYGGSSSSSSYGSGRRF	20	2	F8W6I7;P09651-3;P09651-2;P09651;A0A2R8Y4L2;H0YH80	F8W6I7	HNRNPA1	Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed	1	NQGGYGGSSSSSSY(0.009)GS(0.991)GRRF	124.45	0.00025777	7414900.0	1542.9	1319.2	3467.2	2008.9	1429.5	1542.7	1483.2	1516.1	1403.2	1927.8	True	False	1475.0759634162953	1537.1753774339977	2739.4821020914706	1832.7828560184612	1617.5043061746655	1840.8049415110306	1815.8453558289557	1462.7779036663396	1337.9655382743708	1578.6567392360591	0.9343867648708176	0.9737236342954866	1.7353247441347863	1.1609761707319466	1.0246079885342303	1.1660577602207747	1.1502471124328626	0.9265965597905752	0.847534175746044	1.0	10.62448179250496	-9.250226432976964	4.242334175425977	0.9108497438992899	1.1748680048117877	0.2104657989131289	0.21148046936049375	0.3353812478381695	15.08171938424337	0.12044584179183077	0.06104939205485621	5.620482074166069e-10	9.250226432976964	0.2640182609124978	
NQIHVKS(ph)PPREGSQGELTPANSQSR	ddPTM_K562_Methotrexat_30min_R1	3	NQIHVKSPPREGSQGELTPANSQSR	25	2	C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7	C9JFE4	GPS1	COP9 signalosome complex subunit 1	1	NQIHVKS(0.865)PPREGS(0.125)QGELT(0.008)PANS(0.002)QSR;NQIHVKS(0.968)PPREGS(0.026)QGELT(0.006)PANSQSR;NQIHVKS(0.996)PPREGS(0.004)QGELTPANSQSR	83.064	0.00035739999999999996	218976000.0	6129.73	4549.49	8792.1	6710.7	4384.29	4092.17	3482.72	4512.21	5569.6	7450.9	True	False	5860.274408731461	5301.215894392208	6946.758361155527	6122.383350033896	4960.900982524321	4882.923936930832	4263.808614922205	4353.513016755026	5310.670511668282	6101.469809302814	0.9604692954140975	0.8688424363437034	1.138538512566909	1.0034276234062809	0.8130665458608866	0.8002865030137354	0.6988166373324087	0.7135187344723551	0.8703920002310243	1.0	12.574941106217143	-7.786974624764529	5.962891489643219	0.7938364288085966	0.9948508952642242	0.41488715872451953	0.10092763193916748	0.15361919264430976	16.64453302806179	0.03132677685648074	0.03680779609096439	1.633147367684544e-08	7.786974624764529	0.2010144664556276	
NQKPSQVNGAPGS(ph)PTEPAGQK	ddPTM_K562_Methotrexat_30min_R1	6	NQKPSQVNGAPGSPTEPAGQK	21	1	Q9BQG0-2;Q9BQG0;I3L1L3	Q9BQG0-2	MYBBP1A	Myb-binding protein 1A	1	NQKPSQVNGAPGS(0.997)PT(0.003)EPAGQK;NQKPSQVNGAPGS(0.997)PT(0.003)EPAGQK;NQKPSQVNGAPGS(0.933)PT(0.067)EPAGQK;NQKPSQVNGAPGS(0.997)PT(0.003)EPAGQK;NQKPSQVNGAPGS(0.917)PT(0.083)EPAGQK;NQKPSQVNGAPGS(0.823)PT(0.177)EPAGQK	151.41	2.1936e-17	154184000.0	28971.7	18336.300000000003	50848.799999999996	29713.999999999996	18087.699999999997	14711.0	13951.590000000002	23263.6	23737.999999999996	34589.200000000004	True	False	27698.138757734072	21366.061911190885	40176.331769966804	27109.01975396117	20466.54958992338	17553.692548498584	17080.589204375476	22445.40600206598	22634.425561257856	28324.76070379912	0.9778772377772992	0.7543245337400191	1.4184173412832424	0.9570785094161489	0.7225674315115488	0.6197295974381933	0.6030267786899434	0.7924305605538776	0.7991038582091875	1.0	14.789776147319843	-7.677400993050973	4.6822292055747115	0.731264634153519	1.0443014954403376	0.3422885903975381	0.18433750600299326	0.22709124102044448	8.889518373005615	0.05606900689230253	0.07236280398978105	2.101836874231522e-08	7.677400993050973	0.3130368612868185	
NQNYLVPS(ph)PVLR	ddPTM_K562_Methotrexat_30min_R1	3	NQNYLVPSPVLR	12	0	C9J3R1;C9IZP0;J3KR59;J3KR68;Q9UID6	C9J3R1	ZNF639	Zinc finger protein 639	1	NQNYLVPS(1)PVLR;NQNYLVPS(1)PVLR;NQNYLVPS(1)PVLR	181.76	0.00012851	75986000.0	7903.4	6924.2	9751.300000000001	8320.9	7948.2	7072.8	6867.3	8518.9	8682.9	9421.4	True	False	7555.975999263951	8068.306358723842	7704.6353893991	7591.419616030667	8993.527615486159	8439.518500239326	8407.466836626336	8219.285458441514	8279.233874203628	7715.093164767408	0.9793758594866879	1.045782103522671	0.9986445043313196	0.9839699215426818	1.165705640024801	1.0938971597621348	1.0897427493190617	1.0653514199901832	1.0731216976111821	1.0	12.913467863044149	-7.72895011797049	24.9999892245764	1.085622452003829	1.0048388048155614	0.46539689775549997	0.04146778678475025	169.93753156916594	130763.72737938022	0.01197194802239702	0.01545458157699889	1.8665940710707855e-08	7.72895011797049	-0.08078364718826747	
NQPTVYIAAS(ph)PPNTDELMSR	ddPTM_K562_Methotrexat_30min_R1	2	NQPTVYIAASPPNTDELMSR	20	0	A0A1B0GV57;Q9NYJ8-2;Q9NYJ8	A0A1B0GV57	TAB2	TGF-beta-activated kinase 1 and MAP3K7-binding protein 2	1	NQPTVY(0.001)IAAS(0.958)PPNT(0.04)DELMSR;NQPT(0.008)VY(0.26)IAAS(0.362)PPNT(0.056)DELMS(0.314)R	96.561	0.00028728	41761000.0	2983.34	2218.15	3144.65	2799.3199999999997	2297.18	2089.56	1937.07	2472.54	2910.32	2818.14	True	False	2852.1959457504536	2584.661585396621	2484.6309391849195	2553.9079618246806	2599.2994348081957	2493.3378969234377	2371.507256887537	2385.5793667509865	2775.0198584312043	2307.747537665062	1.2359219971852966	1.1199932155541312	1.0766476395848852	1.106666964276638	1.12633613182754	1.0804205643075468	1.0276285504293015	1.0337263187656451	1.2024798263847007	1.0	11.172269689719721	-6.248786384609397	2.259649397899448	1.0832121191391924	1.2779848108239613	0.4236444765020484	0.054037220727753695	0.6242721776055459	3.621421475975574	0.01397552584249332	0.24544277608039244	5.63914959127573e-07	6.248786384609397	0.19477269168476896	
NQSPTEAEKPASSSLPS(ph)SPPPQLLTR	ddPTM_K562_Methotrexat_30min_R1	1	NQSPTEAEKPASSSLPSSPPPQLLTR	26	1	Q99567;I3L2W3	Q99567	NUP88	Nuclear pore complex protein Nup88	1	NQSPTEAEKPAS(0.001)S(0.059)S(0.059)LPS(0.44)S(0.44)PPPQLLT(0.001)R	105.82	5.6549e-08	18276000.0	4958.9	3734.2	6476.1	5686.2	3240.6	3425.9	3354.6	4303.5	4387.4	6254.8	True	False	4740.912693619203	4351.2130794527275	5116.855111142876	5187.699674395032	3666.79570100708	4087.906689001518	4106.954443543562	4152.143465752977	4183.430731631255	5121.9951097487865	0.9255988324931701	0.8495152740718133	0.9989964850618215	1.012827924126907	0.7158920737796101	0.7981082764450381	0.8018270918936882	0.8106496349147477	0.8167580487667502	1.0	12.322490160177605	-7.754253664607007	24.999972321160673	0.8120145166576891	0.943523373109508	0.36330692839682643	0.07870123506305945	171.82176189177406	597785.5877067812	0.02297508578290177	0.029031581318539355	1.76094720428522e-08	7.754253664607007	0.13150885645181887	
NQVIIPLVLS(ph)PDRDEDLMR	ddPTM_K562_Methotrexat_30min_R1	1	NQVIIPLVLSPDRDEDLMR	19	1	Q96G25;Q96G25-2	Q96G25	MED8	Mediator of RNA polymerase II transcription subunit 8	1	NQVIIPLVLS(1)PDRDEDLMR	79.92	0.009504799999999999	7207200.0	1913.2	1835.6	2543.0	2317.9	1848.1	1652.7	1756.7	2112.3	2100.9	2551.5	True	False	1829.0980188009958	2138.901700134814	2009.2590521511931	2114.6933057719116	2091.1575433657904	1972.0608847055687	2150.6846929508665	2038.0092117369618	2003.2296175603087	2089.398625459492	0.8754184082028618	1.0236924989191258	0.9616446702262595	1.012106201279259	1.000841829742236	0.943841381283517	1.0293319172055533	0.9754046867379226	0.958758942956501	1.0	11.028872047584297	-6.250301233565484	24.851307694744474	0.9887511582204367	0.8754183368016382	0.6091111038389485	0.027413840430474307	1007.6082378971829	2248120.294766285	0.006464959144532638	0.09556737323908815	5.619514115369801e-07	6.250301233565484	-0.11333282141879852	
NQVVSS(ph)TNGELNTDDPTAGR	ddPTM_K562_Methotrexat_30min_R1	1	NQVVSSTNGELNTDDPTAGR	20	0	H0YBN6;Q9Y6M4-6;Q9Y6M4-5;Q9Y6M4-3;Q9Y6M4-4	H0YBN6	CSNK1G3		1	NQVVS(0.075)S(0.924)T(0.002)NGELNTDDPTAGR	312.63	0.0	0.0	1576.8	974.22	1642.8	1535.6	1166.9	1218.4	998.75	1366.0	1295.6	1609.8	True	False	1507.4857600070106	1135.1932960913807	1297.9987301903175	1400.9763321728062	1320.3678033404792	1453.8385562565893	1222.7451113364132	1317.9570057438289	1235.3678387886796	1318.2496207190618	1.1435510667431308	0.8611368273879496	0.9846380456246988	1.0627549670058845	1.0016068145123092	1.1028552812809218	0.9275520296902843	0.9997780276431459	0.9371273993728343	1.0	10.36440786629407														
NQYDNDVT(ph)VWSPQGR	ddPTM_K562_Methotrexat_30min_R1	1	NQYDNDVTVWSPQGR	15	0	B4DEV8;P25786;P25786-2	B4DEV8	PSMA1	Proteasome subunit alpha type;Proteasome subunit alpha type-1	1	NQYDNDVT(0.883)VWS(0.117)PQGR	142.74	5.5246000000000004e-06	11061000.0	1041.6	725.85	1139.4	1133.1	1147.8	665.84	875.17	1239.5	1641.2	2132.8	True	False	995.8125111766244	845.784375159542	900.2555108222846	1033.7628822512418	1298.7558185570338	794.5041565150088	1071.4491505264475	1195.9060824447126	1564.900970222277	1746.529252745445	0.5701665228974915	0.4842657939052649	0.5154540122400664	0.5918955440489904	0.7436209937597456	0.4549045801930276	0.6134733494112338	0.6847329242065748	0.8960061606539605	1.0	10.770275091401366	-9.730741022507651	1.6944543487397654	1.001891434805573	0.5636423285760915	0.8076672972144695	0.07434933333326088	0.14986159200083923	0.8296226776206009	0.07216084154192277	0.021718805300413615	1.8589126271746075e-10	9.730741022507651	-0.43824910622948143	
NQYDNDVTVWS(ph)PQGR	ddPTM_K562_Methotrexat_30min_R1	2	NQYDNDVTVWSPQGR	15	0	B4DEV8;P25786;P25786-2	B4DEV8	PSMA1	Proteasome subunit alpha type;Proteasome subunit alpha type-1	1	NQYDNDVTVWS(1)PQGR;NQYDNDVTVWS(1)PQGR	190.18	2.6877999999999995e-83	10088000.0	2347.3	1672.36	1991.66	1786.83	1640.22	1820.76	1603.13	2453.7	2481.4	3212.6	True	False	2244.115502577659	1948.6890647403895	1573.6377836442953	1630.1813881325447	1855.9376796598872	2172.5961011898776	1962.6727112257777	2367.4019802296	2366.040255611476	2630.767009269514	0.8530270809503512	0.7407303869457762	0.5981669140975155	0.6196601152396227	0.7054739827284158	0.8258413206242629	0.7460458126129359	0.8998904015019398	0.8993727864439258	1.0	11.361267768264451	-9.351834085176915	0.8604012048229214	0.9896346133828932	0.6993713083371758	0.6396929422248014	0.07368764067450025	0.3975827076318322	0.5440822577405138	0.07313208219851831	0.03043623594092854	4.4480116373630085e-10	9.351834085176915	-0.2902633050457174	
NREEEWDPEYT(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	NREEEWDPEYTPK	13	1	Q9Y2W1;A0A3B3ITZ9	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	1	NREEEWDPEYT(1)PK;NREEEWDPEYT(1)PK	177.93	0.0054572	25122000.0	5743.700000000001	4416.700000000001	9395.1	4801.3	4935.3	4740.1	4361.1	7530.6	5940.700000000001	11612.0	True	False	5491.213825312193	5146.484603936277	7423.196901638094	4380.377483499147	5584.37845558854	5656.0572394220735	5339.187689661309	7265.744529615291	5664.518153667732	9508.954277419398	0.5774782026612536	0.541225086775048	0.780653338429202	0.46065817078341476	0.587275771096048	0.5948138012245286	0.5614905208178468	0.7640950116743138	0.5957035851059961	1.0	13.215070977826416	-11.306898088295819	0.4949709449824219	1.05932824707685	0.5857149313426179	0.6383584021806996	0.08983487951479463	4.188268385500459	1.0298132217004856	0.5418132756414316	0.044104950377133065	4.932895458821555e-12	11.306898088295819	-0.47361331573423204	
NREPVQLETLSIR	ddPTM_K562_Methotrexat_30min_R1	1	NREPVQLETLSIR	13	1	J3QLI9;P62314	J3QLI9	SNRPD1	Small nuclear ribonucleoprotein Sm D1	0		150.51	1.1393e-08	6979500.0	849.95	676.18	990.74	1093.2	1016.3	759.52	795.37	1138.1	1162.8	1200.9	False	True	812.5872157013943	787.9072519051861	782.7972132631826	997.3608533024945	1149.9612636343563	906.2864906828665	973.7519691651	1098.0723779187795	1108.7416818026215	983.4053730410744	0.82629934508956	0.8012029154047312	0.796006646620678	1.0141909741841906	1.169366463880735	0.9215797630638054	0.9901836982585093	1.1166019710906294	1.1274513158027175	1.0	9.941642427421087	-7.309116829354292	4.73560511377147	1.052898848679313	0.8061657211269174	0.7173311825556183	0.0694542681912838	0.11176367235928492	5.712283648793122	0.02067129625109124	0.03207453012678263	4.907758350167119e-08	7.309116829354292	-0.24673312755239551	
NRHS(ph)PDHPGMGSSQASSSSSLR	ddPTM_K562_Methotrexat_30min_R1	7	NRHSPDHPGMGSSQASSSSSLR	22	1	J3KR33;A0JLT2	J3KR33	MED19	Mediator of RNA polymerase II transcription subunit 19	1	NRHS(1)PDHPGMGSSQASSSSSLR;NRHS(1)PDHPGMGSSQASSSSSLR;NRHS(1)PDHPGMGSSQASSSSSLR;NRHS(0.999)PDHPGMGSSQASSSSSLR;NRHS(0.967)PDHPGMGS(0.033)SQASSSSSLR;NRHS(1)PDHPGMGSSQASSSSSLR;NRHS(1)PDHPGMGSSQASSSSSLR	102.61	4.4045e-05	100735500.0	6398.179999999999	5588.530000000001	8538.669999999998	6883.709999999999	5773.64	5697.09	5354.37	6286.2699999999995	6787.709999999999	6623.280000000001	True	False	6116.923668164416	6511.939593731977	6746.519854829658	6280.225831949245	6532.974859952636	6797.972012856079	6555.223771500729	6065.178321008246	6472.1508436433405	5423.73981110458	1.127805514497692	1.200636428096977	1.2438870760387166	1.1579142898947867	1.2045147974423485	1.2533735484393798	1.2086169321912428	1.1182649854608406	1.1933003921744625	1.0	12.405072255497569	-10.811279162476788	0.7556801218316697	0.9960766744613267	1.1988213353239352	0.6526609101494583	0.041703057980462976	2.098049746069487	1.484059719190461	0.06485789555973852	0.014897198039083187	1.5442614763286652e-11	10.811279162476788	0.20274466086260845	
NRLVQTAELT(ph)KVQT(ph)GMGLQSVR	ddPTM_K562_Methotrexat_30min_R1	1	NRLVQTAELTKVQTGMGLQSVR	22	2	M0QYJ8	M0QYJ8	GMFG		2	NRLVQT(0.131)AELT(0.867)KVQT(0.572)GMGLQS(0.43)VR	45.369	0.027993999999999998	10507000.0	1773.3	1610.9	1309.1	1793.8	1444.8	1358.3	2011.4	2051.2	2236.7	1963.5	True	False	1695.3478552894671	1877.0738443817675	1034.3377999099987	1636.5403390541667	1634.81652435198	1620.7722512830962	2462.507651506445	1979.0581333687715	2132.716305201173	1607.891123295987	1.0543921977840167	1.1674135251981412	0.6432884571125241	1.0178178829045665	1.0167457862450282	1.0080111941663714	1.5315139289149102	1.230840885116609	1.326405920339529	1.0	10.650954003866152	-8.629504275237192	9.204104128862424	1.2909491391171	0.9776567994564463	0.39376890860266933	0.17443942480695848	0.27075356300370224	21.49595247764882	0.06561219247012384	0.050754317685540964	2.346906159399864e-09	8.629504275237192	-0.3132923396606536	
NRNS(ph)NVIPYDYNR	ddPTM_K562_Methotrexat_30min_R1	2	NRNSNVIPYDYNR	13	1	P08575-4;P08575-9;P08575-10;P08575-8;P08575-7;P08575-5;P08575-6;P08575	P08575-4	PTPRC	Receptor-type tyrosine-protein phosphatase C	1	NRNS(1)NVIPYDYNR;NRNS(0.993)NVIPY(0.005)DY(0.002)NR	135.86	7.5546e-14	22568000.0	2470.08	1801.76	3640.3999999999996	2724.2	2186.29	1772.89	1853.6	2513.1000000000004	2752.7	3209.7	True	False	2361.4982407902803	2099.4702153164644	2876.3297890095164	2485.3736155933548	2473.8254561361373	2115.475901183309	2269.3169846039314	2424.712848561359	2624.7275778277217	2628.392227371086	0.8984573216274678	0.7987659503225482	1.094330503285051	0.945587035949814	0.9411934148848301	0.8048554850959991	0.8633859745026331	0.9225079968321749	0.9986057447951634	1.0	11.359964865596266	-9.729357962810989	4.507180063091145	1.0015550087641545	0.9077372888563507	0.17713557606436836	0.07868811395246025	0.361307642057015	16.1621384183051	0.06770283258995402	0.02131393973842607	1.8648419801592997e-10	9.729357962810989	-0.09381771990780374	
NRS(ph)AEEGELAESK	ddPTM_K562_Methotrexat_30min_R1	1	NRSAEEGELAESK	13	1	Q9C0C2	Q9C0C2	TNKS1BP1	182 kDa tankyrase-1-binding protein	1	NRS(1)AEEGELAESK	118.55	0.00095716	16287000.0	3159.1	2627.6	5425.7	3407.0	2547.0	2173.5	1869.3	2695.5	3099.3	4541.9	True	False	3020.229746599534	3061.7662384366095	4286.919716577555	3108.3135997087456	2881.975143635446	2593.4981139393435	2288.53810925773	2600.6977371760554	2955.2142194795883	3719.3178980891466	0.8120386128196303	0.8232063841624391	1.1526091165210754	0.8357214104515472	0.7748665810782408	0.6973047706601769	0.6153112403845608	0.6992405081889347	0.7945581153463307	1.0	11.860822348125867	-7.649026244647749	3.578610146099113	0.7368263889364541	0.9277427639687262	0.2269467546317312	0.12968814779661364	0.29342997384363917	7.238759826890439	0.039767572815573485	0.052281387894187716	2.243746328895434e-08	7.649026244647749	0.1909163750322721	
NRVS(ph)EELIMVVQEMK	ddPTM_K562_Methotrexat_30min_R1	1	NRVSEELIMVVQEMK	15	1	A0A087WV69;P56645;P56645-2;Q8TAR6	A0A087WV69	PER3	Period circadian protein homolog 3	1	NRVS(1)EELIMVVQEMK	68.809	0.017597	13146000.0	2645.0	1668.2	3029.5	2475.8	2071.7	2372.6	2053.9	2444.5	2537.7	2350.7	True	False	2528.7289670335745	1943.841695448299	2393.64935056706	2258.750457927477	2344.16486261074	2831.0713711214553	2514.5393583718246	2358.525549444209	2419.722880899994	1924.9654512512736	1.3136490140068955	1.0098060171338428	1.243476525259781	1.1733979207051404	1.2177698363817264	1.4707128220307493	1.3062776564313472	1.2252300673298375	1.2570214594382025	1.0	10.910616837609501	-5.931589000107018	21.849771765616577	1.2256293157426503	4.065074892648372	0.04321946560376899	0.12967359215563096	4029.318425442422	1235356.4537852402	0.031740931555230785	22350.572837215877	1.170606684935727e-06	5.931589000107018	2.839445576905722	
NS(ph)DSGS(ph)S(ph)KT(ph)FPT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	NSDSGSSKTFPTR	13	1	Q15397	Q15397	KIAA0020	Pumilio domain-containing protein KIAA0020	5	NS(0.998)DS(0.555)GS(0.965)S(0.895)KT(0.972)FPT(0.614)R	49.223	0.034171	42029000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
NS(ph)IRHNLSLHSRFMR	ddPTM_K562_Methotrexat_30min_R1	1	NSIRHNLSLHSRFMR	15	2	O43524	O43524	FOXO3	Forkhead box protein O3	1	NS(1)IRHNLSLHSRFMR	102.9	0.0066746999999999996	15944000.0	352.17	364.62	348.93	554.61	288.3	386.28	448.19	585.08	576.67	678.92	True	False	336.6890284764513	424.8672575196973	275.6943614105841	505.98820238757474	326.21650330196275	460.9231430653273	548.7080164704552	564.5024047734994	549.8607375689004	555.9610091306906	0.6055982756828641	0.7642033353814262	0.49588794336794256	0.910114547742738	0.5867614777734863	0.8290565983863399	0.9869541342987769	1.0153632997683852	0.9890275190856842	1.0	9.118839896633062	-8.584161363758483	2.9671250420356223	1.0012025065451984	0.6808134343743019	0.6797319857237096	0.1049194010975049	0.1491392857099886	2.6704490018510803	0.040998367940031255	0.03120993754736857	2.605185403653897e-09	8.584161363758483	-0.3203890721708965	
NS(ph)KAVYS(ph)LIS(ph)TPFS(ph)SENASLEENT(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	NSKAVYSLISTPFSSENASLEENTK	25	1	Q0VDD8-4;A0A1W2PR53;H7BXS7;Q0VDD8	Q0VDD8-4	DNAH14	Dynein heavy chain 14, axonemal	5	NS(0.543)KAVY(0.514)S(0.887)LIS(0.55)T(0.55)PFS(0.824)S(0.14)ENAS(0.465)LEENT(0.527)K	42.903999999999996	0.032362	0.0	373.81	431.22	551.45	484.75	444.09	150.68	109.68	370.28	379.32	294.29	True	False	357.37775998745605	502.4717755132568	435.7081810101356	442.25272012292766	502.4956189780388	179.79677745957216	134.2785319763483	357.25704252329814	361.68549599361074	240.99122927159456	1.4829492387239334	2.0850210069138093	1.8079835615888622	1.8351403138597775	2.0851199460530223	0.746071871590576	0.5571926097983334	1.4824483181529948	1.5008243125146892	1.0	7.912836831181702	-8.257456312649625	24.998948503850546	1.0562032593206532	1.867599296819851	0.6224735535069104	0.3122299810801408	249.00435787082975	1562830.2139003775	0.11213288380890532	0.10817843516866084	5.527690103060944e-09	8.257456312649625	0.8113960374991978	
NS(ph)LTGEEGQLAR	ddPTM_K562_Methotrexat_30min_R1	1	NSLTGEEGQLAR	12	0	Q9BX95	Q9BX95	SGPP1	Sphingosine-1-phosphate phosphatase 1	1	NS(0.973)LT(0.027)GEEGQLAR	103.66	0.0049446	6152600.0	575.35	526.76	947.98	714.64	688.16	682.99	546.69	653.89	543.23	694.95	True	False	550.0583029046383	613.7981366109258	749.0119529132074	651.9886207501788	778.6651020196969	814.9681512948845	669.29914885257	630.8923180716199	517.9753558700021	569.0878207968152	0.9665613685678028	1.0785648790576978	1.3161623312628081	1.1456731227129215	1.3682687865810228	1.4320604334034015	1.1760911486656713	1.1086027411169481	0.9101852771067085	1.0	9.152507494066821	-9.50694668944851	2.7403929824541016	0.9574755179495272	1.2224630730479626	0.3714778414832325	0.13170542845485975	0.31803644901663325	4.584886248226448	0.11133548643697033	0.03883388571501845	3.1120983302071224e-10	9.50694668944851	0.2649875550984354	
NS(ph)PGLLVSPGNLNK	ddPTM_K562_Methotrexat_30min_R1	1	NSPGLLVSPGNLNK	14	0	Q06413-5;Q06413-6;A0A0D9SGI5;A0A0D9SFD0;D6RC63;Q06413-3;Q06413-4;D6RJG6;A0A0D9SGF3;D8L7E9;Q06413-2;A0A0R4J2G5;Q06413;A0A0D9SFV9;A0A1B0GV32	Q06413-5	MEF2C	Myocyte-specific enhancer factor 2C	1	NS(1)PGLLVSPGNLNK	161.48	6.0891e-40	0.0	2032.6	1177.5	3059.9	2168.9	1390.2	1241.5	1464.9	1594.4	1797.6	2335.8	True	False	1943.2493377665207	1372.061860922175	2417.668806007643	1978.7559044344864	1573.0356673270503	1481.402304327441	1793.4411149904495	1538.3240482854771	1714.0299683594703	1912.7639856352257	1.0159378534729002	0.7173189537372617	1.2639660847675043	1.0345008162506495	0.8223887939863358	0.7744825370263702	0.9376175672791386	0.804241432732017	0.8961011296907307	1.0	10.901443156380832	-7.759120959261825	24.974410791941192	0.8610417904646785	1.0054611689488786	0.1858151182249358	0.137629590218904	101.94588231142512	1098168.2737200072	0.04171596152905335	0.05129657438160057	1.7413218146471692e-08	7.759120959261825	0.14441937848420006	
NS(ph)SVAMGASLSCSEYSLK	ddPTM_K562_Methotrexat_30min_R1	1	NSSVAMGASLSCSEYSLK	18	0	Q9NTM9	Q9NTM9	CUTC	Copper homeostasis protein cutC homolog	1	NS(0.5)S(0.5)VAMGAS(0.001)LSCSEYSLK	73.44800000000001	0.014305000000000002	73280000.0	1805.7	1609.9	1653.0	1341.7	1863.7	2107.7	1446.5	1789.6	1285.2	1737.1	True	False	1726.3235900841314	1875.9086113788615	1306.0578895815656	1224.075244123634	2108.8092168014855	2514.983195192064	1770.9144466063813	1726.6587536450636	1225.4513325186867	1422.4943571568413	1.2135890602297768	1.3187459071038183	0.9181462710277468	0.8605132512231611	1.4824728169863473	1.7680092596070434	1.244936008144125	1.213824677024491	0.861480628273291	1.0	10.47420721422875	-9.692698961189791	5.742719453951811	0.9322611559453462	1.2574975414397578	0.21702641798972433	0.2450289893471917	0.32565184248305284	19.041870488751158	0.1987710397693403	0.07036180593119233	2.0290887304799614e-10	9.692698961189791	0.3252363854944116	
NSAS(ph)VGIIQR	ddPTM_K562_Methotrexat_30min_R1	2	NSASVGIIQR	10	0	Q53EU6	Q53EU6	AGPAT9	Glycerol-3-phosphate acyltransferase 3	1	NS(0.007)AS(0.993)VGIIQR;NS(0.004)AS(0.996)VGIIQR	120.59	0.0038545000000000003	97364000.0	4367.8	3215.3	3857.1	4535.9	3462.8	3704.9	3378.7	3639.4	4632.9	4243.8	True	False	4175.796741856048	3746.5736742446447	3047.547420390234	4138.244689439067	3918.2188957129274	4420.819490376753	4136.459482024873	3511.4002391684435	4417.5174902161725	3475.2066967372075	1.2015966548915231	1.078086571875629	0.8769399020931639	1.1907909516071002	1.1274779423599908	1.272102604581005	1.1902772534101356	1.0104147884110655	1.2711524452239573	1.0	11.762883072998793	-6.242547513116876	22.094229228083805	1.1162415954896552	1.201597006867479	0.04649249561218227	0.1195356424796429	3161.9961789626263	3697688.429470417	0.03022198560025395	0.8413691041688961	5.720743645799759e-07	6.242547513116876	0.08535541137782388	
NSASATT(ph)PLSGNSSR	ddPTM_K562_Methotrexat_30min_R1	1	NSASATTPLSGNSSR	15	0	Q9Y608-2;Q9Y608-5;C9JSU1;Q9Y608-4;Q9Y608	Q9Y608-2	LRRFIP2	Leucine-rich repeat flightless-interacting protein 2	1	NSASAT(0.024)T(0.782)PLS(0.191)GNS(0.002)SR	101.67	0.006321899999999999	13615000.0	1480.5	1051.0	1982.1	1504.8	1156.3	1171.7	1281.6	1271.3	1217.1	1208.1	True	False	1415.4189927006453	1224.6598860545264	1566.084296999165	1372.8765203527203	1308.373717544431	1398.1144421912707	1569.031423968708	1226.5876584203	1160.517286654601	989.3013832716484	1.4307257794584431	1.2379037437555587	1.5830204258080371	1.3877232394162613	1.3225228829839508	1.4132340920899813	1.585999423936794	1.2398523636588266	1.1730674860847123	1.0	9.950266283979303	-9.767242993422393	2.0014984705220353	1.0208583379014076	1.4154324146030812	0.627576744377711	0.10563125234896241	0.19946890747047352	1.5442651713782383	0.09794388685182874	0.028475253047571755	1.7090588068507748e-10	9.767242993422393	0.39457407670167366	
NSASATTPLS(ph)GNSSR	ddPTM_K562_Methotrexat_30min_R1	1	NSASATTPLSGNSSR	15	0	Q9Y608-2;Q9Y608-5;C9JSU1;Q9Y608-4;Q9Y608	Q9Y608-2	LRRFIP2	Leucine-rich repeat flightless-interacting protein 2	1	NSASAT(0.045)T(0.045)PLS(0.908)GNS(0.001)SR	141.6	4.3778e-06	14085000.0	847.98	715.75	1255.7	908.26	655.98	727.14	697.92	860.96	692.52	1052.5	True	False	810.7038145425827	834.0155218301882	992.1457301558213	828.6342559646215	742.252867970938	867.6495139497831	854.4463260114236	830.6795488032269	660.3248963553078	861.8820510664764	0.940620370895801	0.967667815797061	1.1511386377383763	0.9614241936460857	0.8612000528987563	1.006691707845836	0.9913726883558465	0.9637972478662944	0.7661429954809181	1.0	9.751346639153514	-8.471495914320501	0.7138855356004702	0.9137071476720748	1.0036932735705582	0.09946259362696308	0.08956605420502647	1.7267101605328423	1.855692010109678	0.07333052722918205	0.06015961848598266	3.376790253846326e-09	8.471495914320501	0.08998612589848332	
NSASATTPLSGNSS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	NSASATTPLSGNSSR	15	0	Q9Y608-2;Q9Y608-5;C9JSU1;Q9Y608-4;Q9Y608	Q9Y608-2	LRRFIP2	Leucine-rich repeat flightless-interacting protein 2	1	NSASAT(0.001)T(0.001)PLS(0.005)GNS(0.172)S(0.82)R	95.554	0.0054424	23497000.0	2924.8	1967.0	2988.8	3062.5	2659.8	2441.6	2566.3	2867.6	3299.1	3281.4	True	False	2796.229294056634	2292.0133167167032	2361.4917243686523	2794.015379837989	3009.61032078585	2913.4046445798494	3141.8581018499526	2766.744882628847	3145.725561089635	2687.1066625838816	1.040609713411161	0.8529670029967241	0.8788232180176566	1.0397858107914872	1.1200189269345393	1.0842162260050976	1.169234606723348	1.0296371637024584	1.170673871972299	1.0	11.39183787379384	-7.440289666137298	3.9841314563239854	1.0993240013863295	0.9182443332477416	0.5566575155600708	0.06815764647175719	0.15481204394169645	4.544087379256373	0.018886050947605273	0.02826575753306874	3.628359693737275e-08	7.440289666137298	-0.1810796681385879	
NSATFKS(ph)FEDR	ddPTM_K562_Methotrexat_30min_R1	2	NSATFKSFEDR	11	1	O43399;O43399-5;O43399-7;O43399-6;O43399-2;O43399-4;O43399-3	O43399	TPD52L2	Tumor protein D54	1	NSATFKS(1)FEDR;NSATFKS(1)FEDR	120.53	0.006458800000000001	39253000.0	4069.1000000000004	3457.9500000000003	9208.599999999999	4177.5	3365.0	3097.0	3223.6000000000004	4763.7	3716.0	5889.9	True	False	3890.2272362027684	4029.31746239986	7275.840702964789	3811.2650609871666	3807.5564814814616	3695.4514188498465	3946.5743588526293	4596.157970909134	3543.2439710857784	4823.182035702076	0.8065686112210972	0.835406466638438	1.5085146380766234	0.79019722514628	0.7894283179231536	0.7661853505622302	0.8182511731133852	0.9529306455546425	0.7346278753026608	1.0	12.235769545736117														
NSCNVLHPQS(ph)PNNSNR	ddPTM_K562_Methotrexat_30min_R1	1	NSCNVLHPQSPNNSNR	16	0	Q7Z333-3;Q7Z333;Q7Z333-4	Q7Z333-3	SETX	Probable helicase senataxin	1	NSCNVLHPQS(0.986)PNNS(0.014)NR	82.265	0.014338	10034000.0	1789.9	1776.5	2356.8	2071.3	1576.5	1781.6	1534.3	1676.5	1877.9	2143.3	True	False	1711.218139165746	2070.0364296630523	1862.1398875776363	1889.7123449007122	1783.837382780245	2125.868985412622	1878.4058316129756	1617.5365447507534	1790.5968388864321	1755.1276009983646	0.9749821826016286	1.17942218473777	1.060971228825984	1.0766808885153376	1.0163576606997402	1.2112332939231139	1.0702388991800293	0.9216062375354671	1.0202089226264186	1.0	10.777360205582564	-9.121076731344177	6.608937816159778	0.9791630095899405	1.0902826596898703	0.3212570620352636	0.0691842929564196	0.26910421704367604	13.430077206013237	0.0315490024013277	0.01811229431006834	7.566991892570072e-10	9.121076731344177	0.11111965009992975	
NSEMT(ph)SAMKK	ddPTM_K562_Methotrexat_30min_R1	1	NSEMTSAMKK	10	1	Q8NGN8;Q6IF82	Q8NGN8	OR4A4P;OR4A47	Putative olfactory receptor 4A4;Olfactory receptor 4A47	1	NSEMT(0.5)S(0.5)AMKK	81.625	0.012097	45096000.0	1832.9	1941.1	1503.0	1576.8	1986.6	2121.8	1873.9	1733.4	1899.5	1399.2	True	False	1752.3279106524924	2261.833781941429	1187.5408397102794	1438.564392139933	2247.8727209839712	2531.807820637912	2294.169776353747	1672.4353394995267	1811.1926596010323	1145.7913214747866	1.5293604322268841	1.9740364057131683	1.0364372791563436	1.2555204121185943	1.9618517603106458	2.2096587512804136	2.0022579446673094	1.459633449960922	1.5807351876865197	1.0	10.162128600234045	-7.762026885829776	24.999999826090942	1.765698061234718	1.4568955323687527	0.07991692047718546	0.3867481701785757	35.91768514539191	1528426.0112132197	0.12189510956415027	0.14673361602064003	1.7297092749426173e-08	7.762026885829776	-0.30880252886596526	
NSFNNPAY(ph)YVLEGVPHQLLPPEPPSPAR	ddPTM_K562_Methotrexat_30min_R1	1	NSFNNPAYYVLEGVPHQLLPPEPPSPAR	28	0	O15357;O15357-2;A0A0A0MTP6	O15357;A0A0A0MTP6	INPPL1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	NSFNNPAY(0.739)Y(0.261)VLEGVPHQLLPPEPPSPAR	132.77	1.3857e-17	62270000.0	867.01	793.74	1034.9	925.14	861.2	789.52	540.6	874.91	992.85	1058.3	True	False	828.8972785284611	924.8920437268504	817.6886327452885	844.0344125725117	974.4628950525508	942.0835660995582	661.8433113276246	844.1389193962908	946.6926202078887	866.6316148633273	0.9564586201475963	1.0672262906918195	0.9435250442302899	0.9739252504717597	1.124425740233616	1.087063464962711	0.7636962464518458	0.9740458401456036	1.0923818194160704	1.0	9.75927505709601	-10.920843432388747	11.534806907056016	0.9999981615441921	0.9965339066894534	0.0	0.09918788541459621	149748706.22011116	0.0	0.09911343868330448	0.024778359670826134	1.1999318128977083e-11	10.920843432388747	-0.0034642548547386687	
NSGIS(ph)DEYIT(ph)PMFS(ph)FYKS(ph)IGELK	ddPTM_K562_Methotrexat_30min_R1	1	NSGISDEYITPMFSFYKSIGELK	23	1	Q96RI1-5;Q96RI1-2;Q96RI1-1;Q96RI1-4;Q96RI1	Q96RI1-5	NR1H4	Bile acid receptor	4	NS(0.06)GIS(0.806)DEY(0.222)IT(0.876)PMFS(0.84)FY(0.325)KS(0.871)IGELK	47.81399999999999	0.030983	2484300.0	574.55	589.78	556.64	681.9	507.7	561.13	568.23	700.31	563.57	484.15	True	False	549.2934699467447	687.2311204540805	439.808870935682	622.118885718049	574.4714489296099	669.5604309522812	695.6700421673995	675.6797003605134	537.3697537095836	396.4657434905788	1.3854752370548695	1.7333934437904623	1.109323764175689	1.5691617647486167	1.4489813013145258	1.6888229107950457	1.7546788180046902	1.7042574584418528	1.355400214350053	1.0	8.6310524054358	-10.041313919316146	6.358518130959083	1.0000421499583603	1.5489200723152718	0.4475531207410107	0.1872198130522839	0.27982943939661026	39.30134293097938	0.18427842380548273	0.04778145992920198	9.0925580136495e-11	10.041313919316146	0.5488779223569116	
NSGSDGSPS(ph)PLLAR	ddPTM_K562_Methotrexat_30min_R1	1	NSGSDGSPSPLLAR	14	0	H7C1V4;Q9HCH0-2;Q9HCH0	H7C1V4	NCKAP5L	Nck-associated protein 5-like	1	NSGS(0.001)DGS(0.058)PS(0.942)PLLAR	132.84	0.00028267	20251000.0	1770.2	1315.3	1991.4	1808.3	1358.4	1396.5	1418.4	1708.6	1558.0	2026.5	True	False	1692.384127577631	1532.630968722663	1573.4323540911846	1649.7691465668688	1537.0534099389054	1666.353860647018	1736.5123063024469	1648.5075695563012	1485.568920062336	1659.4812128135059	1.0198272294437978	0.9235603011884785	0.9481471329365441	0.9941475286543491	0.9262252552609289	1.0041414435911933	1.046418780094739	0.9933873049164565	0.8952008064880007	1.0	10.696516581246597	-8.294282297825848	24.747599721422727	0.9910781931694476	0.9611987188625377	0.07285268185680405	0.04454626658639911	1510.3177259216855	1138039.795445098	0.015934934728118	0.014053994009672067	5.078292387499284e-09	8.294282297825848	-0.029879474306909848	
NSHHVYMALIILLILTEDDGFNR	ddPTM_K562_Methotrexat_30min_R1	1	NSHHVYMALIILLILTEDDGFNR	23	0	Q7RTS9-2;Q7RTS9	Q7RTS9-2	DYM	Dymeclin	0		64.265	0.01137	0.0	603.4	453.45	580.96	649.35	312.47	409.62	425.42	559.53	352.07	689.49	False	True	576.8752584907593	528.3749051678645	459.0244352881464	592.422493680914	353.56528195200923	488.77326773951415	520.8312643451684	539.851012755377	335.7023425457936	564.616679705297	1.0217113295198093	0.935811718215004	0.8129841922625015	1.0492472414915732	0.626204103882573	0.86567273923723	0.9224510771042356	0.9561372027428477	0.5945668178294241	1.0	9.141127938776059	-5.726523221598759	0.8892268375694456	0.8468621733273337	1.3363125673684768	0.1240173956492987	0.14020308430984035	10.855984868762475	3.467021139129695	0.04643692204895114	6.460524333132848	1.8770540501613727e-06	5.726523221598759	0.4894503940411431	
NSKYEYDPDIS(ph)PPR	ddPTM_K562_Methotrexat_30min_R1	2	NSKYEYDPDISPPR	14	1	Q9BRD0;H7C462	Q9BRD0	BUD13	BUD13 homolog	1	NSKYEYDPDIS(1)PPR;NSKYEYDPDIS(1)PPR	144.4	5.5836e-08	32465000.0	9799.4	6932.3	14345.1	10658.599999999999	7450.2	7284.700000000001	6189.4	8274.4	9189.8	11948.300000000001	True	False	9368.630109470247	8077.744746047386	11334.259547390511	9724.177086544069	8430.03188657747	8692.3651762659	7577.530505237145	7983.384662025435	8762.568203843939	9784.347088605777	0.9575120367899002	0.8255783112451325	1.1584073464227023	0.9938503814800501	0.8615834874045448	0.8883950147668485	0.7744543848062638	0.8159343275262969	0.895570049231825	1.0	13.256259867403976	-7.764682557046825	23.706357687575974	0.8593297407263354	0.9850021538719298	0.2466145314862319	0.09346532081911535	57.782488304628146	422368.7257506586	0.029018515478281263	0.03431809208759445	1.7191645331310927e-08	7.764682557046825	0.1256724131455944	
NSLETLLY(ph)KPVDR	ddPTM_K562_Methotrexat_30min_R1	2	NSLETLLYKPVDR	13	1	P11274;P11274-2;H0Y554	P11274	BCR	Breakpoint cluster region protein	1	NSLET(0.008)LLY(0.992)KPVDR;NSLETLLY(1)KPVDR	191.48	5.5269e-07	96697000.0	5303.5	3482.6	7083.6	6268.700000000001	4101.2	3390.5	3415.1	4882.5	5211.8	7516.299999999999	True	False	5070.3644902315955	4058.0404559215017	5596.84916312158	5719.132803784623	4640.579685542872	4045.66614000982	4181.02310861075	4710.779707572657	4969.50455557181	6155.02523556385	0.8237763934638213	0.6593052506875307	0.9093137637816465	0.929181048802102	0.7539497415428155	0.6572948095539699	0.6792861034025857	0.7653550598547807	0.8073897937668753	1.0	12.587549056424328	-10.217675241206873	3.252327275979162	0.999976601985175	0.7710534554652435	0.36288057047189937	0.09005379546223119	1.7626441913689181	24.691517271611456	0.09500984287586027	0.025203519372909305	6.057937087222292e-11	10.217675241206873	-0.2289231465199315	
NSLLAGGDDDTMSVIS(ph)GISSR	ddPTM_K562_Methotrexat_30min_R1	2	NSLLAGGDDDTMSVISGISSR	21	0	Q8N3U4;Q8N3U4-2	Q8N3U4	STAG2	Cohesin subunit SA-2	1	NSLLAGGDDDT(0.002)MS(0.029)VIS(0.845)GIS(0.071)S(0.052)R;NSLLAGGDDDTMSVIS(1)GISSR	200.23	1.1629000000000001e-26	45639000.0	3132.58	2319.04	3597.8100000000004	3480.71	2309.9700000000003	2417.6099999999997	2242.09	2738.63	3125.7200000000003	3450.25	True	False	2994.875534045383	2702.22194305984	2842.6788479827314	3175.5615584509046	2613.771543990411	2884.7789166049665	2744.935756371724	2642.310830629739	2980.405959446244	2825.3762913939295	1.0599917409825186	0.9564113464428734	1.006123983074929	1.1239428773164255	0.9251056406015493	1.0210246774533986	0.9715292666441541	0.9352066974859928	1.0548704498315973	1.0	11.464227307083943														
NSLLAGGDDDTMSVISGISS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	NSLLAGGDDDTMSVISGISSR	21	0	Q8N3U4;Q8N3U4-2	Q8N3U4	STAG2	Cohesin subunit SA-2	1	NSLLAGGDDDTMSVISGIS(0.048)S(0.952)R	185.3	1.2551e-18	17247000.0	1465.7	1399.7	2401.1	1555.2	1460.2	1695.2	1228.4	1527.2	1735.9	1946.2	True	False	1401.2695829796269	1630.9766341679563	1897.1419229729563	1418.858030603769	1652.2418942820887	2022.7734082125494	1503.8999697278111	1473.4875103748002	1655.1983878923038	1593.7243209364142	0.8792421402945599	1.023374377075236	1.190382739380086	0.8902782068169104	1.0367175003712634	1.2692116080803997	0.9436387146581126	0.9245560797547676	1.038572585075297	1.0	10.638186381233645														
NSLPAS(ph)PAHQLSS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	1	NSLPASPAHQLSSSPR	16	0	Q8TEK3;Q8TEK3-1	Q8TEK3	DOT1L	Histone-lysine N-methyltransferase, H3 lysine-79 specific	2	NS(0.003)LPAS(0.997)PAHQLS(0.022)S(0.882)S(0.097)PR	163.15	6.1976e-08	14308000.0	1877.5	1863.5	2700.0	2063.8	1671.4	1721.5	1584.2	2296.9	2243.6	2413.4	True	False	1794.9673480550232	2171.4117009159	2133.306897683138	1882.8698582562101	1891.2183961807164	2054.155510994516	1939.4971768502098	2216.1167251046877	2139.2955257072244	1976.3098736758518	0.908241856180408	1.0987202613511045	1.0794394776337772	0.9527199571968705	0.9569442633321115	1.039389388453479	0.981373013758631	1.1213407141375078	1.082469684639194	1.0	10.948593455352883	-9.251301722478802	24.5996436389405	1.076428901660909	1.0068345381246593	0.18388668089394367	0.06201246471543118	878.2860670300862	2131222.305272153	0.029872889332198938	0.016986827370266033	5.606583279860113e-10	9.251301722478802	-0.0695943635362497	
NSLPAS(ph)PAHQLSSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	NSLPASPAHQLSSSPR	16	0	Q8TEK3;Q8TEK3-1	Q8TEK3	DOT1L	Histone-lysine N-methyltransferase, H3 lysine-79 specific	2	NS(0.08)LPAS(0.919)PAHQLS(0.131)S(0.229)S(0.641)PR	131.98	0.00011362	14727000.0	2754.3	2189.1	2864.1	2826.8	2257.2	2112.7	2180.6	2663.5	2165.3	3010.7	True	False	2633.224269905701	2550.8115666621948	2262.964550242325	2578.9788328901345	2554.0613640415886	2520.9493744281785	2669.655058603437	2569.823195313828	2064.635675616802	2465.4330557205135	1.068057501620603	1.0346302288531333	0.9178771027635881	1.0460551045611084	1.0359483734978858	1.0225178771651704	1.0828341302592133	1.0423415023786995	0.8374332739744256	1.0	11.267625364314647	-9.736331333252428	24.993460337328067	0.9187165636758766	1.0296883018060423	0.398620382847824	0.0552769468088293	191.77910239919044	190904.91766157318	0.03681932726526875	0.013904171631477873	1.8351377403354664e-10	9.736331333252428	0.1109717381301657	
NSLPASPAHQLSS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	2	NSLPASPAHQLSSSPR	16	0	Q8TEK3;Q8TEK3-1	Q8TEK3	DOT1L	Histone-lysine N-methyltransferase, H3 lysine-79 specific	1	NSLPASPAHQLS(0.105)S(0.448)S(0.448)PR;NSLPAS(0.002)PAHQLS(0.045)S(0.722)S(0.231)PR	120.99	0.00037754	23256000.0	2655.8	2200.52	2545.4	2777.6	2070.7	1956.73	1817.6100000000001	2106.59	2030.25	2740.1	True	False	2539.0542119651313	2564.1185275553844	2011.1553249491317	2534.0921205022046	2343.03334508281	2334.8403793367993	2225.255310954873	2032.5000356734224	1935.864120639639	2243.841337888124	1.1315658416182215	1.1427361125135083	0.8963001487627491	1.1293544145537764	1.0442063373732315	1.040555024953022	0.9917168711443992	0.9058127245246255	0.8627455461987569	1.0	11.131754951190526	-8.947961541471875	2.0590370883610336	0.9129591130695416	1.064775978168326	0.4268587250611434	0.07357317656084034	0.3152065816150906	2.674233776555924	0.04144325010385106	0.02280367099861464	1.1272972784766415e-09	8.947961541471875	0.15181686509878434	
NSLSSLPTYSTGGAEPT(ph)TSSPGGHLPSHGSGR	ddPTM_K562_Methotrexat_30min_R1	1	NSLSSLPTYSTGGAEPTTSSPGGHLPSHGSGR	32	0	Q9BRK4	Q9BRK4	LZTS2	Leucine zipper putative tumor suppressor 2	1	NSLSSLPTYSTGGAEPT(0.25)T(0.25)S(0.25)S(0.25)PGGHLPSHGSGR	111.09	1.8538e-14	8968400.0	1068.4	890.23	1209.2	1122.9	1049.9	1028.9	748.28	1013.2	1025.4	1182.3	True	False	1021.4344152660382	1037.32537617728	955.4054446957228	1024.4571004147194	1187.9802525727744	1227.7203632078167	916.1008379582596	977.5651817127736	977.7293778125282	968.1740132787601	1.0550111873039327	1.0714245186816533	0.9868117007811479	1.0581332346913077	1.2270317487138822	1.2680782032664693	0.946215066086981	1.0096998765771557	1.0098694701600268	1.0	9.919122561171383	-8.84941751173918	24.819002482708488	0.992253733943843	1.1066092393616662	0.34854119455167787	0.07998229671299634	28.661690766972505	8079.2190213212825	0.03791183533823306	0.025560158043624083	1.414433351710526e-09	8.84941751173918	0.11435550541782324	
NSMSPGVTHRPPS(ph)AGNTGGLMGGDLTSGAGTSAGNGYGNPR	ddPTM_K562_Methotrexat_30min_R1	1	NSMSPGVTHRPPSAGNTGGLMGGDLTSGAGTSAGNGYGNPR	41	1	Q06413-5;Q06413-6;A0A0D9SGI5;A0A0D9SFD0;D6RC63;Q06413-3;Q06413-4;D6R942;D6RJG6;A0A0D9SGF3;D8L7E9;Q06413-2;A0A0R4J2G5;Q06413	Q06413-5	MEF2C	Myocyte-specific enhancer factor 2C	1	NS(0.011)MS(0.038)PGVT(0.135)HRPPS(0.406)AGNT(0.406)GGLMGGDLT(0.003)S(0.001)GAGTSAGNGYGNPR	72.072	2.2731e-07	17376000.0	757.72	482.45	637.85	623.5	426.22	482.71	414.98	362.9	623.1	608.33	True	False	724.4115360683106	562.1666622521471	503.97400173599596	568.8387230462001	482.27540075394603	575.9868758130484	508.0498285881202	350.1366013063218	594.1322170031076	498.1555421617764	1.4541874470063758	1.1284962520191797	1.0116800057045838	1.1418897812070699	0.9681221223818619	1.1562390198722234	1.0198618415112013	0.702866016077795	1.1926640711951824	1.0	8.960452463933377	-3.0232074276818897	0.8900121431739064	1.0075412308857228	199.9695940313669	0.4971499457354519	0.12961128191400298	678.9518477169491	1.6339635905175895	0.04305318527804605	274113.8729609179	0.0009479655879402435	3.0232074276818897	198.9620528004812	
NSMSPGVTHRPPSAGNT(ph)GGLMGGDLTSGAGTSAGNGYGNPR	ddPTM_K562_Methotrexat_30min_R1	1	NSMSPGVTHRPPSAGNTGGLMGGDLTSGAGTSAGNGYGNPR	41	1	Q06413-5;Q06413-6;A0A0D9SGI5;A0A0D9SFD0;D6RC63;Q06413-3;Q06413-4;D6R942;D6RJG6;A0A0D9SGF3;D8L7E9;Q06413-2;A0A0R4J2G5;Q06413	Q06413-5	MEF2C	Myocyte-specific enhancer factor 2C	1	NS(0.005)MS(0.099)PGVT(0.027)HRPPS(0.377)AGNT(0.492)GGLMGGDLTSGAGTSAGNGYGNPR	84.272	6.7612e-14	16844000.0	1251.6	1077.7	1301.8	1163.1	863.28	937.34	780.09	936.68	1133.4	1237.3	True	False	1196.5811626235252	1255.7716072321248	1028.5699701495957	1061.1328288292457	976.8164515106437	1118.4676890360724	955.0450402026762	903.7364334847218	1080.7084813855274	1013.2129803178628	1.1809769375912818	1.239395498899123	1.015156724331458	1.047294941381771	0.9640781064650387	1.1038821163593753	0.9425906090376592	0.8919511011408516	1.0666153142318509	1.0	9.984721749375726	-6.779496894445988	10.286111838459133	1.0014932037104032	1.2102305817372347	0.6564953637028652	0.05965323088539486	0.16446732786296958	91.06119391041403	0.01577002212086879	0.03401806912720892	1.6615105588578227e-07	6.779496894445988	0.20873737802683157	
NSNFSVQHPSST(ph)SPTEK	ddPTM_K562_Methotrexat_30min_R1	1	NSNFSVQHPSSTSPTEK	17	0	Q03468	Q03468	ERCC6	DNA excision repair protein ERCC-6	1	NSNFSVQHPS(0.002)S(0.018)T(0.499)S(0.481)PTEK	198.67	4.913599999999999e-121	0.0	2337.4	1817.8	4012.0	2738.8	1726.1	1602.2	1555.6	2219.1	2468.5	2725.3	True	False	2234.650694723734	2118.1605526830817	3169.936027223983	2498.693656261319	1953.1124049584387	1911.8024744208024	1904.4828988184488	2141.0529952021475	2353.7399737958126	2231.721761303057	1.0013124097597932	0.9491149790314052	1.4203992998540829	1.1196259764937644	0.8751594570723081	0.8566491161983112	0.8533693275932659	0.9593727284139714	1.0546744735873848	1.0	11.123941455821019	-7.750156440249649	22.862525158673627	0.9233533377952573	1.13149110343192	0.3339933715157424	0.13034703324703473	89.90966387900846	182180.08778232202	0.04087434335370423	0.052175466827320126	1.7776389589457826e-08	7.750156440249649	0.20813776563666264	
NSNFSVQHPSSTS(ph)PTEK	ddPTM_K562_Methotrexat_30min_R1	1	NSNFSVQHPSSTSPTEK	17	0	Q03468	Q03468	ERCC6	DNA excision repair protein ERCC-6	1	NSNFSVQHPS(0.057)S(0.181)T(0.181)S(0.576)PT(0.005)EK	122.16	0.00022012	6976400.0	2915.9	2254.4	4776.6	2999.8	2376.2	2157.8	1914.2	2504.9	2648.6	3169.5	True	False	2787.7205274000767	2626.901281751975	3774.056936101214	2736.8121914899607	2688.711949865154	2574.7643111379416	2343.5080772166843	2416.801247209164	2525.4671641059717	2595.4728369170516	1.0740703920104901	1.0121089476984297	1.454092249558699	1.054456110101616	1.0359237483135648	0.9920212897301179	0.9029214422449301	0.9311602929660722	0.9730277767444355	1.0	11.341781673855852	-7.783474847206796	2.3487908682232987	0.9568824056980477	1.1693022627721035	0.3911487359837559	0.11376494735806951	0.305095668824002	3.451754076590556	0.03895620148664284	0.048921320680737776	1.6463613149644547e-08	7.783474847206796	0.21241985707405575	
NSNS(ph)PPS(ph)PSSMNQR	ddPTM_K562_Methotrexat_30min_R1	2	NSNSPPSPSSMNQR	14	0	Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3	Q7Z5L9	IRF2BP2	Interferon regulatory factor 2-binding protein 2	2	NSNS(1)PPS(0.958)PS(0.035)S(0.007)MNQR;NSNS(1)PPS(0.96)PS(0.034)S(0.007)MNQR	160.63	1.4643e-07	40178000.0	11471.4	10062.5	13358.3	12608.400000000001	8971.5	9947.0	9354.7	10973.5	10896.7	11835.3	True	False	10967.130991466518	11725.157091744704	10554.575381970608	11503.041147803866	10151.40950181602	11869.116972327874	11452.729605025026	10587.555785160988	10390.11479540646	9691.812483598163	1.1315872041505783	1.2098002423785696	1.0890197679569773	1.1868823470605643	1.047421162862535	1.2246540048535244	1.181691208368603	1.092422681833633	1.0720507452027226	1.0	13.242550776574738	-9.831707067501005	1.71005983080696	1.0049930888111582	1.151816937300974	0.4611630468204747	0.05241725787671522	0.2948290014264415	1.791242830316762	0.04782802869884075	0.014064793586440508	1.473305915160017e-10	9.831707067501005	0.14682384848981567	
NSNS(ph)PPSPSSMNQR	ddPTM_K562_Methotrexat_30min_R1	1	NSNSPPSPSSMNQR	14	0	Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3	Q7Z5L9	IRF2BP2	Interferon regulatory factor 2-binding protein 2	1	NS(0.001)NS(0.999)PPSPSSMNQR	80.507	0.029173	6902900.0	3572.4	3161.2	4107.1	4470.4	2953.4	3531.4	3064.4	3088.4	3757.9	4571.3	True	False	3415.361573470982	3683.534568787414	3245.0758368423762	4078.486972743754	3341.8238669858374	4213.79307088355	3751.6697063121974	2979.7792214782157	3583.1960492312264	3743.3932731973237	0.9123704949530559	0.9840095068721479	0.8668808217605941	1.0895160286646075	0.89272583004123	1.125661335413056	1.0022109440581979	0.7960101982373637	0.9572053449171081	1.0	11.870130907435605	-10.324598004231028	0.0026743288971928523	1.3909210003155343	0.5386891055760311	0.003663738540669925	0.09494217203461279	890731.8645674983	1167.1722862257857	186991.5184570371	184937.00885395205	4.735894244663821e-11	10.324598004231028	-0.8522318947395032	
NSPNNISGISNPPGT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	NSPNNISGISNPPGTPR	17	0	Q9NW25;A0A087WVT6;Q9BWW4-2;Q9BWW4-3;Q9BWW4	Q9NW25	SSBP3	Single-stranded DNA-binding protein 3	1	NSPNNISGIS(0.001)NPPGT(0.999)PR;NSPNNISGISNPPGT(1)PR;NSPNNISGISNPPGT(1)PR;NSPNNISGISNPPGT(1)PR	220.16	1.2231999999999996e-165	66298600.0	3828.13	3136.52	3487.1399999999994	3575.48	3262.8500000000004	3170.5400000000004	2958.63	3499.94	3994.03	3920.32	True	False	3659.849988873435	3654.7766182756873	2755.236968587694	3262.023219690822	3691.9719660035025	3783.201983054632	3622.178091367464	3376.845126415125	3808.348417070973	3210.312059322498	1.1400293557897319	1.1384490201388673	0.8582458395552852	1.016107829834847	1.1500352295292606	1.1784530329593679	1.1282947029554147	1.0518744171953713	1.1862860515418816	1.0	11.648497826419353	-7.756974023868485	24.992011146379063	1.1221726253042434	1.0325136314556445	0.14755496831338732	0.09021095733774698	207.30810416063034	1160266.4724390167	0.02803878670556557	0.03495324938979579	1.7499513540279656e-08	7.756974023868485	-0.08965899384859899	
NSQEDS(ph)EDSEDKDVK	ddPTM_K562_Methotrexat_30min_R1	2	NSQEDSEDSEDKDVK	15	1	Q9H1E3	Q9H1E3	NUCKS1	Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1	1	NSQEDS(0.998)EDS(0.002)EDKDVK;NSQEDS(1)EDSEDKDVK	188.44	8.0675e-06	44595900.0	4260.2	3008.6	9201.9	5059.9	2746.3	2662.9	2291.3599999999997	3295.9	4126.0	6287.5	True	False	4072.926709019446	3505.7200125439085	7270.546941403875	4616.3064230015525	3107.4865869517166	3177.4677375703127	2805.2558080718945	3179.9813288660976	3934.183160575865	5148.772822879306	0.7910480514737057	0.6808845783534558	1.4120931708418294	0.896583823331326	0.603539269229972	0.6171310809152002	0.5448396937628206	0.6176192732247571	0.7641011355353962	1.0	12.330012900780007	-7.667788234690489	5.558761813877272	0.6617891361801489	0.9666196247140636	0.24817516725021982	0.21405255991605454	0.2661208348801096	12.69621232427993	0.06470574347189413	0.08359310567613253	2.1488780280665526e-08	7.667788234690489	0.3048304885339147	
NSS(ph)MS(ph)LDEKSRTMS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	NSSMSLDEKSRTMSR	15	2	E9PNV5;A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-6;Q8IVL1-5;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1	E9PNV5	NAV2	Neuron navigator 2	3	NS(0.622)S(0.687)MS(0.688)LDEKS(0.016)RT(0.029)MS(0.958)R	58.082	0.024971	37219000.0	1713.8	1356.5	2008.8	1506.3	1654.6	1491.7	1411.7	1854.8	1485.0	1480.0	True	False	1638.4634040461776	1580.6385684424035	1587.1803318762543	1374.245017681622	1872.2089017115086	1779.9499133026538	1728.3096607495515	1789.565632689352	1415.962674128735	1211.9576585067794	1.3519147245332683	1.3042027973071815	1.3096004804588444	1.1339051393716117	1.5447807838585774	1.468656846886617	1.4260478892298563	1.4765908859342727	1.1683268505215807	1.0	10.243123581716068	-9.978380563123672	4.762329892688642	1.0008442285737695	1.3735096631451045	0.5586319047771362	0.10912002454608742	0.12437700268583626	7.59465822016333	0.11320508632855492	0.029562941965024216	1.0510404655144779e-10	9.978380563123672	0.37266543457133494	
NSSDAKLEPTNVQTVTCS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	NSSDAKLEPTNVQTVTCSPR	20	1	J3KTI7;J3QR52;J3QLN7;Q99741	J3KTI7	CDC6	Cell division control protein 6 homolog	1	NSSDAKLEPTNVQTVT(0.007)CS(0.992)PR;NSSDAKLEPTNVQT(0.002)VT(0.317)CS(0.681)PR	105.24	0.00015416	62036000.0	2542.1000000000004	1678.33	3445.6000000000004	2349.6000000000004	2146.4	1732.1599999999999	1833.97	2503.3	2420.6	4219.299999999999	True	False	2430.352327824595	1955.645505767739	2722.4156469100076	2143.614215989337	2428.6892219470433	2066.875405125912	2245.2844574094033	2415.257520116052	2308.0668343407515	3455.1438841470604	0.7034011923426898	0.5660098598905415	0.7879311942408631	0.620412430817917	0.7029198503397758	0.5982024119485092	0.6498381927627527	0.699032399547171	0.6680088910133833	1.0	11.754530075340215	-11.279251819677281	0.9855394394957174	1.0067833161801207	0.6625247270809344	0.738062005160727	0.0596725446969097	8.68177545078322	5.9733631363420505	0.29946684920032995	0.01725178971191724	5.257123509284612e-12	11.279251819677281	-0.3442585890991864	
NSSLGSPSNLCGS(ph)PPGSIR	ddPTM_K562_Methotrexat_30min_R1	2	NSSLGSPSNLCGSPPGSIR	19	0	Q9C0B0	Q9C0B0	UNK	RING finger protein unkempt homolog	1	NSSLGS(0.003)PS(0.001)NLCGS(0.993)PPGS(0.003)IR;NSSLGSPSNLCGS(1)PPGSIR	184.88	7.663e-13	56731000.0	3214.7	3029.6	3682.3	3419.2	2937.2	2501.7	2925.5	3415.1	3146.6000000000004	3617.9	True	False	3073.385637173095	3530.189905604945	2909.435551606895	3119.444044650469	3323.493283033387	2985.118118997953	3581.617845521578	3294.9889973028926	3000.315252803688	2962.663251832214	1.037372585383238	1.1915596223842697	0.9820338338512143	1.0529188704525554	1.1217924551425218	1.0075792843320455	1.208918307980693	1.1121712855030543	1.012708835858476	1.0	11.532678937785093	-9.810442117219281	7.350873459695667	1.004419588854159	1.0902265830767652	0.1845649165002463	0.06973452593063605	0.4097851010237742	49.1577889181106	0.06476855618550867	0.01706303662040093	1.5472407064909948e-10	9.810442117219281	0.08580699422260629	
NSSNTSVGS(ph)PSNTIGR	ddPTM_K562_Methotrexat_30min_R1	4	NSSNTSVGSPSNTIGR	16	0	H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-4;Q7Z460-5;Q7Z460-3;Q7Z460	H0Y5T1;Q7Z460	CLASP1	CLIP-associating protein 1	1	NSSNTSVGS(0.964)PS(0.036)NTIGR;NSSNT(0.007)S(0.002)VGS(0.913)PS(0.078)NTIGR;NSSNT(0.002)SVGS(0.997)PS(0.001)NTIGR;NSSNTSVGS(0.5)PS(0.5)NTIGR	266.39	3.169499999999999e-110	358655000.0	8103.2	7321.1	10794.4	9905.1	7613.7	7805.3	7512.299999999999	8905.5	9028.3	10336.300000000001	True	False	7746.9930304977215	8530.787337577349	8528.802954204026	9036.73526165985	8615.035002393874	9313.563758330232	9197.124505524442	8592.288517314544	8608.57630359358	8464.295909205144	0.9152554581737464	1.007855517940942	1.0076210763057951	1.0676298842331542	1.0178088165637966	1.1003353212405402	1.0865788016132951	1.015121471352414	1.0170457644600452	1.0	13.047174349174572	-5.805591638043496	1.0450023443407428	1.046784799574768	0.7076942777561513	0.5710241081758362	0.0325775939278968	3.017667471590385	1.3996653789989626	0.010568676184376907	1.4282620800988586	1.5646181430903766e-06	5.805591638043496	-0.33909052181861676	
NSSS(ph)PVS(ph)PASVPGQR	ddPTM_K562_Methotrexat_30min_R1	2	NSSSPVSPASVPGQR	15	0	Q9H1B7	Q9H1B7	IRF2BPL	Interferon regulatory factor 2-binding protein-like	2	NS(0.004)S(0.105)S(0.891)PVS(0.991)PAS(0.009)VPGQR;NS(0.007)S(0.114)S(0.882)PVS(0.959)PAS(0.038)VPGQR	99.74700000000001	0.0059719	32372000.0	5435.200000000001	4936.4	6038.5	5460.7	4421.8	4892.799999999999	4251.8	5186.9	4830.2	6113.299999999999	True	False	5196.275115924721	5752.056195546687	4771.1013709850495	4981.968909283694	5003.344204996946	5838.264353293033	5205.374382358111	5004.473787037094	4605.645056280547	5006.122130911817	1.0379840882903648	1.1490043680774136	0.9530533307456562	0.995175263208426	0.9994450942581449	1.1662249143389654	1.0398017160260533	0.9996707343864935	0.9200025360631129	1.0	12.289477772554395	-9.42944640742971	3.4613880993044215	0.9597359588884044	1.0492163076393504	0.2345350405306874	0.06471273939772992	0.37304391351630606	8.266848097403454	0.044269061242620096	0.01810154759091108	3.7200912479630473e-10	9.42944640742971	0.08948034875094601	
NSSS(ph)PVSPASVPGQR	ddPTM_K562_Methotrexat_30min_R1	2	NSSSPVSPASVPGQR	15	0	Q9H1B7	Q9H1B7	IRF2BPL	Interferon regulatory factor 2-binding protein-like	1	NS(0.001)S(0.043)S(0.92)PVS(0.036)PAS(0.001)VPGQR;NS(0.001)S(0.231)S(0.728)PVS(0.038)PAS(0.002)VPGQR	139.49	8.2335e-06	27917000.0	3171.0	2704.1	3568.7	3300.2	2916.6000000000004	2846.6000000000004	2600.96	3241.3	3301.3	2981.2	True	False	3031.6066368481897	3150.9065631589406	2819.6786391710434	3010.876589891047	3300.1840219580463	3396.665162705192	3184.291489142989	3127.3016418136704	3147.8232835698254	2441.275791581358	1.241812435654572	1.2906802967631579	1.1550020890284467	1.2333209546721162	1.3518276113410042	1.391348398414655	1.3043554931908516	1.2810112043047512	1.2894173179552135	1.0	11.253419570633843	-11.983250615647561	4.167143592017695	0.9999853905707806	1.2830551014569969	0.6557858103392269	0.06130711112195889	55102071.16206677	114742630.09657747	13068.939980042167	0.017129844917386762	1.039320238604968e-12	11.983250615647561	0.28306971088621624	
NSSSPVS(ph)PASVPGQR	ddPTM_K562_Methotrexat_30min_R1	1	NSSSPVSPASVPGQR	15	0	Q9H1B7	Q9H1B7	IRF2BPL	Interferon regulatory factor 2-binding protein-like	1	NSSSPVS(0.998)PAS(0.002)VPGQR	163.02	4.4818e-06	11207000.0	682.33	641.17	937.46	1031.2	746.81	447.8	680.4	703.94	731.2	734.92	True	False	652.3355901988729	747.1124444734356	740.6999571489018	940.7962970412848	845.0286050327392	534.3310123864906	832.9970200283311	679.1820312030095	697.2066715979331	601.8188664795957	1.0839400798695131	1.2414240996526917	1.230768921356198	1.5632549084819725	1.4041244834609872	0.8878601887510064	1.384132446530028	1.1285489190060756	1.1584991937463154	1.0	9.233185524345457	-8.211131244808856	24.999419175180122	1.136861626318884	1.3114436238243075	0.2441342907459867	0.16660756444298103	614.7242547759923	305472.5224094329	0.05643420338954417	0.05643410172997534	6.14990992907243e-09	8.211131244808856	0.17458199750542347	
NSSTETDQQPHS(ph)PDSSSSVHSIR	ddPTM_K562_Methotrexat_30min_R1	1	NSSTETDQQPHSPDSSSSVHSIR	23	0	Q92613	Q92613	JADE3	Protein Jade-3	1	NSSTETDQQPHS(0.96)PDS(0.027)S(0.006)S(0.002)S(0.004)VHSIR	130.53	2.2473e-14	0.0	1812.2	1732.1	2668.2	1720.4	1507.5	1678.3	1504.3	1805.5	1962.6	1863.8	True	False	1732.5378578670122	2018.3000843340105	2108.181283110424	1569.575203093316	1705.7626733531358	2002.6077223944778	1841.6775679432951	1741.9995416328584	1871.3591543737753	1526.2477594087388	1.1351616060934886	1.322393478969555	1.3812837857512226	1.028388211165245	1.117618461902896	1.31211181805127	1.206670120621014	1.1413609165969887	1.2261175440471939	1.0	10.57577346194371	-15.985542227531186	0.21133976415422218	3.5698783303468255e-10	1.2386720836836935	0.2711720774224252	0.10221713882238753	208.25903752049	2.0893225208461184	88.34515577320892	0.22674025336868095	1.0338505722360815e-16	15.985542227531186	1.2386720833267058	
NSTGGTSVGWDS(ph)PPASPLQR	ddPTM_K562_Methotrexat_30min_R1	2	NSTGGTSVGWDSPPASPLQR	20	0	Q13424-2;Q13424	Q13424-2	SNTA1	Alpha-1-syntrophin	1	NSTGGTSVGWDS(1)PPASPLQR;NSTGGTS(0.017)VGWDS(0.814)PPAS(0.169)PLQR	203.75	3.2156999999999996e-21	65308000.0	2516.0099999999998	1893.08	2650.8	2568.48	1780.7	1880.69	1807.1	2245.38	2409.81	2563.48	True	False	2405.4092129853098	2205.879293141868	2094.433305325355	2343.3053462224593	2014.8932619833674	2244.1067255139556	2212.388175915927	2166.4087127065004	2297.7784590856354	2099.208931370918	1.1458646050131005	1.050814552175751	0.9977250353815691	1.116280190696469	0.9598345509455855	1.0690249512459964	1.0539151881709534	1.0320119547565456	1.094592550911566	1.0	11.035630047886743	-6.269409483392169	4.934817480299501	1.0418263414688425	1.150635960697838	0.33301770943954045	0.04442921662376098	0.1783981711641041	13.22814356904509	0.01031565684291847	0.06578813339314149	5.377625030825072e-07	6.269409483392169	0.10880961922899557	
NSTLPMEETS(ph)PCSSR	ddPTM_K562_Methotrexat_30min_R1	1	NSTLPMEETSPCSSR	15	0	Q9BYW2;H7BZ93;C9JG86;H7BXT4;H7C3H4;Q9BYW2-3;Q9BYW2-2	Q9BYW2	SETD2	Histone-lysine N-methyltransferase SETD2	1	NSTLPMEET(0.093)S(0.904)PCS(0.002)S(0.002)R	102.15	0.001987	7829200.0	1463.7	1068.0	1716.2	1685.7	1236.1	1282.8	1401.5	1589.6	1398.6	1675.2	True	False	1399.3575005848936	1244.4688471039349	1355.9930732606663	1537.9172982180894	1398.668816273175	1530.6829448177539	1715.822051101862	1533.6928670061434	1333.5793912703352	1371.8050469801049	1.0200848172015715	0.9071761689778819	0.9884735999811	1.121090275621645	1.0195827893709883	1.1158166739416824	1.2507768905494823	1.118010806551863	0.9721347754231408	1.0	10.4218597532432	-7.1612729441877505	4.672330215070408	1.095556126419031	0.9605941168771718	0.2978163189337818	0.07899670771615767	0.25884905308894546	9.24629528489429	0.022478444659558953	0.040189504310359135	6.898061401367704e-08	7.1612729441877505	-0.13496200954185922	
NSVHEQEAINS(ph)DPELSNCENFQK	ddPTM_K562_Methotrexat_30min_R1	2	NSVHEQEAINSDPELSNCENFQK	23	0	Q8IX90-3;Q8IX90	Q8IX90-3	SKA3	Spindle and kinetochore-associated protein 3	1	NSVHEQEAINS(0.998)DPELS(0.002)NCENFQK;NSVHEQEAINS(0.998)DPELS(0.002)NCENFQK	126.9	4.6913e-08	45882000.0	3069.5	2516.64	4168.9	3143.7	2245.33	2568.8	2219.23	3066.1	2434.7400000000002	3113.8	True	False	2934.5684553155243	2932.4719844341244	3293.904861389347	2868.0967019091227	2540.6302509850725	3065.184244346621	2716.9488194554274	2958.2635251179754	2321.549468827067	2549.8606466610863	1.15087405233623	1.1500518619611815	1.2917979912755424	1.1248052734429823	0.996380039164846	1.202098729732672	1.065528354662493	1.1601667444029429	0.9104613116277623	1.0	11.31620268866208	-9.083381619791323	0.4650110086495687	0.9774774288421166	1.186197981498127	0.36632303731158433	0.08503742528887297	1.1328154727837632	0.5760744832733908	0.08993564382774048	0.07265391074242789	8.253124188961215e-10	9.083381619791323	0.2087205526560103	
NSVLSDPGLDS(ph)PRT(ph)SPVIMAR	ddPTM_K562_Methotrexat_30min_R1	2	NSVLSDPGLDSPRTSPVIMAR	21	1	O15085;O15085-2	O15085	ARHGEF11	Rho guanine nucleotide exchange factor 11	2	NSVLS(0.002)DPGLDS(0.983)PRT(0.542)S(0.474)PVIMAR;NSVLS(0.001)DPGLDS(0.983)PRT(0.508)S(0.508)PVIMAR	84.581	0.0030816	18336000.0	1155.13	984.7	1414.15	1242.85	1012.6099999999999	736.25	726.88	1020.49	1125.55	1438.73	True	False	1104.351868313609	1147.404937961839	1117.339240503189	1133.8912701491085	1145.7859639562976	878.5198925179857	889.9013432072211	984.5987882807624	1073.22342617212	1178.162055421256	0.9373514137821594	0.9738939840084907	0.9483748312567074	0.9624238575088737	0.9725198317871626	0.7456698240072482	0.7553301679615151	0.8357074340920916	0.9109302249497293	1.0	10.202322279240118	-8.237444250571972	24.62173358956145	0.8333719050218921	0.9593547057176985	0.3706819959140456	0.06968979667606683	617.8881836565328	634024.1621973714	0.022873548099290254	0.02286083442336083	5.788362875221087e-09	8.237444250571972	0.12598280069580647	
NSVQT(ph)PVENSTNSQHQVK	ddPTM_K562_Methotrexat_30min_R1	1	NSVQTPVENSTNSQHQVK	18	0	E9PJ60;Q9UHI6	E9PJ60	DDX20	Probable ATP-dependent RNA helicase DDX20	1	NS(0.001)VQT(0.999)PVENSTNSQHQVK	132.67	1.308e-06	11767000.0	3201.3	2041.7	3857.6	2862.8	1880.3	2044.0	1842.5	2408.8	2741.2	3311.3	True	False	3060.574685128386	2379.0562220338024	3047.9424772231364	2611.8227687837375	2127.592407765108	2438.974071723955	2255.72752704615	2324.081138679163	2613.7622103176354	2711.5914828469568	1.1287005083505517	0.8773652805311151	1.124041912841177	0.9632065837740167	0.7846286659417089	0.899462211454959	0.8318832469107088	0.8570911781442319	0.9639218248220015	1.0	11.404924129041845	-7.526944905238999	24.88527023566643	0.8794196761972098	1.029578079415395	0.3810235730190372	0.0870304247249891	106.5884550238668	652325.4449194496	0.024061646031041464	0.031202089103569974	2.9720430423196734e-08	7.526944905238999	0.1501584032181852	
NSYNNSQAPS(ph)PGLGSK	ddPTM_K562_Methotrexat_30min_R1	2	NSYNNSQAPSPGLGSK	16	0	Q9UHB7	Q9UHB7	AFF4	AF4/FMR2 family member 4	1	NSYNNSQAPS(1)PGLGSK;NSY(0.001)NNS(0.007)QAPS(0.991)PGLGSK	196.65	7.8012e-53	22698000.0	4447.4	3126.5	6175.0	4854.4	3394.4	2964.6000000000004	3033.6	4061.7	3931.2999999999997	5520.200000000001	True	False	4251.897621166399	3643.1009835865652	4878.9518863679195	4428.822288942218	3840.823096802575	3537.4669926775146	3713.9620222779918	3918.8477088065247	3748.534721078985	4520.438288168325	0.9405941083844023	0.8059176458888778	1.0793094773880574	0.9797329388466821	0.8496572349755207	0.7825495598372367	0.8215933468218817	0.8669176435974388	0.8292414323828511	1.0	12.142246943477813	-7.773952232288379	22.94604668166733	0.8460468333416351	0.9501349598927568	0.22742405442053237	0.08216706464178485	114.94853264357903	210790.97869339533	0.025525944187975075	0.02918850194490348	1.6828591472577006e-08	7.773952232288379	0.10408812655112165	
NT(ph)IDTKDYS(ph)T(ph)HRLY(ph)QVLEGENK	ddPTM_K562_Methotrexat_30min_R1	1	NTIDTKDYSTHRLYQVLEGENK	22	2	A0A5F9ZHQ7;Q68CZ6-2;Q68CZ6	A0A5F9ZHQ7	HAUS3	HAUS augmin-like complex subunit 3	4	NT(0.521)IDT(0.521)KDY(0.309)S(0.843)T(0.843)HRLY(0.963)QVLEGENK	41.912	0.032774	0.0	458.75	681.43	899.96	588.28	554.12	407.01	431.34	618.93	621.36	775.98	True	False	438.58389929174007	794.024725170444	711.07069468108	536.7064057636219	626.9964925760793	485.6589221782615	528.0789750426521	597.1618810871364	592.4731092233203	635.4425026000613	0.6902023353760123	1.2495618752625242	1.119016577851762	0.8446183621139007	0.9867084590825713	0.7642846051233191	0.8310413182654509	0.9397575369033535	0.9323787861200318	1.0	9.311617780045836	-7.268157514556037	24.947167290109526	0.8924232951150614	1.0425904255879117	0.11361784302928768	0.14819834977080426	870.3672757501902	3232028.2307880158	0.04056146208624248	0.06175001096988756	5.3931498252724146e-08	7.268157514556037	0.15016713047285035	
NTADHDES(ph)PPRT(ph)PTGNAPSSESDIDISSPNVSHDESIAK	ddPTM_K562_Methotrexat_30min_R1	1	NTADHDESPPRTPTGNAPSSESDIDISSPNVSHDESIAK	39	1	O95251;O95251-4	O95251	KAT7	Histone acetyltransferase KAT7	2	NT(0.027)ADHDES(0.329)PPRT(0.329)PT(0.329)GNAPS(0.328)S(0.328)ES(0.328)DIDISSPNVSHDESIAK	69.523	6.5885000000000005e-06	18613000.0	1114.5	791.85	1316.6	970.85	655.02	695.92	837.6	952.03	805.07	1175.2	True	False	1065.5079144646204	922.6897533513579	1040.263652403563	885.7370878418654	741.1666111441266	830.3966907994792	1025.4531216574514	918.5465652842587	767.642471421428	962.3598920791662	1.1071823786864228	0.958778270941756	1.0809507554975994	0.9203803017270824	0.770155341306718	0.8628754145244122	1.0655609508434243	0.954473033263835	0.7976667333495645	1.0	9.910432706868672	-7.321179002834017	7.050419159654169	0.9064588083608313	1.0397551696150766	0.32978525874738174	0.09034712550730173	0.3227401530103043	32.77681109135312	0.026675717135847064	0.03986902818406466	4.773324913282695e-08	7.321179002834017	0.13329636125424538	
NTADHDESPPRTPT(ph)GNAPS(ph)SESDIDISSPNVSHDESIAK	ddPTM_K562_Methotrexat_30min_R1	1	NTADHDESPPRTPTGNAPSSESDIDISSPNVSHDESIAK	39	1	O95251;O95251-4	O95251	KAT7	Histone acetyltransferase KAT7	2	NT(0.003)ADHDES(0.018)PPRT(0.174)PT(0.425)GNAPS(0.425)S(0.425)ES(0.425)DIDIS(0.06)S(0.042)PNVS(0.003)HDES(0.001)IAK	46.361000000000004	0.0024286	8238900.0	1184.9	1066.7	2043.3	1562.9	1227.6	1239.7	1016.5	1229.9	1405.9	1502.8	True	False	1132.8132147591998	1242.9540442001567	1614.439253346651	1425.8829835587894	1389.0509172857762	1479.25447980244	1244.4760006743068	1186.6437198860438	1340.5400158636953	1230.628357570262	0.9205160987804739	1.010015766786189	1.3118820506738367	1.1586625440470393	1.1287330644877238	1.2020318487728192	1.0112524979770376	0.9642583909157911	1.0893134451333801	1.0	10.265179426954164	-8.787987275282555	24.533708172953315	1.013227500217465	1.1274917009670131	0.20149131981655055	0.10273004059385026	307.7009734247943	284352.0148120015	0.04583393044313947	0.03091240231302671	1.6293437712968828e-09	8.787987275282555	0.11426420074954802	
NTAPDNGPILLQAQT(ph)T(ph)QR	ddPTM_K562_Methotrexat_30min_R1	1	NTAPDNGPILLQAQTTQR	18	0	A0A087WYP7;J3KNP2;Q12788	A0A087WYP7	TBL3	Transducin beta-like protein 3	2	NTAPDNGPILLQAQT(1)T(1)QR	50.653	0.033332	0.0	133.33	0.0	150.84	0.0	0.0	0.0	80.081	0.0	0.0	0.0	True	False	127.46897284483423	0.0	119.18074535056465	0.0	0.0	0.0	98.04120276438682	0.0	0.0	0.0											0.0														
NTENCDFLFS(ph)PPEVTGR	ddPTM_K562_Methotrexat_30min_R1	1	NTENCDFLFSPPEVTGR	17	0	A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91;F8WC55;Q8IX09;C9JWI7	A0A494BZT8	TACC3;ERIC-1s	Transforming acidic coiled-coil-containing protein 3	1	NTENCDFLFS(1)PPEVTGR	142.72	3.0904e-07	12186000.0	613.16	424.61	369.14	498.53	321.9	408.55	264.45	502.91	529.21	632.62	True	False	586.2062205770536	494.7695853640464	291.6625585965754	454.8246489177579	364.23549224038106	487.49650538298545	323.759644248225	485.22237024789865	504.60714260987737	518.0463877868636	1.1315709063842223	0.9550681117143628	0.5630047143897319	0.877961239843416	0.7030943576238892	0.9410286740259115	0.6249626517643576	0.9366388448741205	0.9740578344066835	1.0	9.016937477712984	-9.503888350171106	24.346626661744626	0.976468826679773	0.8211368016615807	0.14760526383237693	0.15859382906905184	992.7726259256663	1272795.3569662462	0.08934805609691401	0.04173831871781461	3.134091343086365e-10	9.503888350171106	-0.15533202501819232	
NTFTAWS(ph)DEESDYEIDDRDVNK	ddPTM_K562_Methotrexat_30min_R1	2	NTFTAWSDEESDYEIDDRDVNK	22	1	Q6PKG0;A0A0B4J210;Q6PKG0-3;E5RH50	Q6PKG0	LARP1	La-related protein 1	1	NT(0.001)FT(0.039)AWS(0.951)DEES(0.006)DY(0.003)EIDDRDVNK;NT(0.005)FT(0.034)AWS(0.854)DEES(0.011)DY(0.095)EIDDRDVNK	89.87899999999999	0.00039583	161713000.0	2496.88	1866.87	4280.4	2705.8999999999996	1962.3100000000002	1639.27	1522.33	2492.11	2458.64	3520.95	True	False	2387.1201448796937	2175.338536135693	3382.002535126999	2468.6779481807735	2220.3881602305737	1956.0357272773624	1863.7512544087724	2404.4610787586043	2344.338363043687	2883.2718362969194	0.8279205986853985	0.7544687631428995	1.1729738738302997	0.856207145335064	0.7700932434738068	0.6784083632535888	0.646401505035491	0.8339349236826495	0.813082670017891	1.0	11.493491145910308	-7.613507080011589	4.930422545149919	0.7702760201447009	0.9185841947814216	0.14205749726076766	0.13525179774816165	0.3490795244754675	14.427105999281359	0.041095799552535825	0.05366145323643237	2.434966104009579e-08	7.613507080011589	0.14830817463672075	
NTGNGTQSS(ph)MGSPLTRPTPR	ddPTM_K562_Methotrexat_30min_R1	1	NTGNGTQSSMGSPLTRPTPR	20	1	E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3;A0A0U1RQI6;H7C4I5	E3W994	CLASP2	CLIP-associating protein 2	1	NTGNGT(0.003)QS(0.158)S(0.706)MGS(0.123)PLT(0.01)RPTPR	145.48	2.7539e-12	6004300.0	1187.4	1175.7	1646.6	1364.2	1147.7	1212.6	1090.1	1197.2	1378.0	1448.1	True	False	1135.203317752615	1369.9644415169432	1301.0011621203907	1244.6027040571387	1298.6426668042407	1446.9177883426955	1334.5826742105871	1155.0937974205797	1313.9370807740047	1185.8350576240991	0.9573028815888373	1.1552740262728949	1.097118147887308	1.049558027531067	1.0951292580320229	1.2201678294464438	1.1254370206295923	0.9740762764552503	1.108026847685349	1.0	10.211687638478152	-12.359680923703442	6.720214456895609	0.9999955167780472	1.090089162730614	0.10769845570899628	0.07453155434050943	5.044823109562587e-06	4.807034959270919e-07	0.07272047566328191	0.017636428295721113	4.368366584046485e-13	12.359680923703442	0.09009364595256675	
NTLQPEEALSTSDPRVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	NTLQPEEALSTSDPRVSPR	19	1	Q9BXL7	Q9BXL7	CARD11	Caspase recruitment domain-containing protein 11	1	NTLQPEEALST(0.025)S(0.006)DPRVS(0.969)PR;NTLQPEEALSTSDPRVS(1)PR;NTLQPEEALSTSDPRVS(1)PR;NTLQPEEALSTSDPRVS(1)PR	137.04	5.8840999999999996e-09	137873000.0	8611.8	6813.799999999999	9154.300000000001	9149.900000000001	7947.0	7256.6	6695.299999999999	8576.4	8826.2	10081.1	True	False	8233.235583478161	7939.664635202979	7232.937530911392	8347.742473136206	8992.169794452642	8658.835248958934	8196.891458253504	8274.763150850205	8415.871888481513	8255.315102143706	0.9973254178196286	0.9617639710858814	0.8761552334971651	1.0111961045519025	1.0892582152457866	1.0488800417455226	0.9929229056471713	1.0023558214878374	1.0194488986006258	1.0	13.011107567956175	-7.498201974990969	24.41609389472977	1.027418669339194	0.9462374103232208	0.4704346779455004	0.03831539479162532	505.0726514707616	499737.04908036644	0.011422173630589028	0.016835813986851876	3.1753969624721594e-08	7.498201974990969	-0.08118125901597317	
NTPSQHSHSIQHS(ph)PER	ddPTM_K562_Methotrexat_30min_R1	4	NTPSQHSHSIQHSPER	16	0	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4;E9PJA7	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	NTPSQHSHSIQHS(1)PER;NTPSQHS(0.001)HS(0.018)IQHS(0.981)PER;NT(0.002)PS(0.025)QHS(0.012)HS(0.081)IQHS(0.88)PER;NTPSQHSHSIQHS(1)PER	112.53	0.00072073	36452500.0	2059.13	1370.01	2513.45	1839.1799999999998	1715.0	1813.36	1512.8000000000002	1669.9699999999998	1636.2	1752.1999999999998	True	False	1968.613110732646	1596.3808663116668	1985.9111933265476	1677.9419449111617	1940.5525603984258	2163.766155920427	1852.0839093163731	1611.2362085519926	1560.1334191309327	1434.8596008348493	1.3719900606214301	1.1125693868465172	1.3840456530876457	1.1694119368437714	1.3524337567726818	1.507998521013119	1.2907770964063445	1.1229225546628545	1.0873073701588607	1.0	10.486693862616173	-9.372558423800413	2.866417569272389	1.0539452059105794	1.3122107813130766	0.530911526173707	0.10633764737085938	0.23969247665602023	3.7234941038195903	0.07469483147550535	0.030262983614342775	4.2407393120010377e-10	9.372558423800413	0.25826557540249717	
NTS(ph)IGEEFISTEDVELEEAIRR	ddPTM_K562_Methotrexat_30min_R1	4	NTSIGEEFISTEDVELEEAIRR	22	1	Q9Y4E5-2;Q9Y4E5	Q9Y4E5-2	ZNF451	Zinc finger protein 451	1	NT(0.053)S(0.947)IGEEFISTEDVELEEAIRR;NT(0.031)S(0.969)IGEEFISTEDVELEEAIRR;NT(0.27)S(0.73)IGEEFISTEDVELEEAIRR;NT(0.236)S(0.764)IGEEFISTEDVELEEAIRR	137.86	5.9172e-13	13234800.0	1877.2099999999998	1520.05	2529.5600000000004	2248.14	1590.9599999999998	1356.75	1543.06	1992.32	1836.08	2447.54	True	False	1794.6900961077874	1771.2124260677288	1998.6399244827262	2051.049056662523	1800.1991262340996	1618.9227357198995	1889.1304846045218	1922.2489763422745	1750.7210415584425	2004.266788852487	0.8954347325863292	0.8837208878174397	0.9971925571979455	1.0233413376254268	0.8981833836925356	0.8077381438060895	0.9425544019946143	0.9590783956674896	0.8734970071328636	1.0	10.968858843762344	-12.094441142064825	4.205963531700472	1.0000097560489163	0.9221774014824629	0.13728361347004325	0.05989510185815825	52140528.97319092	1.4016815790697932	6103.807035680012	0.015580639471819521	8.045607795885346e-13	12.094441142064825	-0.07783235456645343	
NTSAEKELSSPIS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	NTSAEKELSSPISPK	15	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	NTSAEKELS(0.003)S(0.15)PIS(0.847)PK;NTSAEKELS(0.001)S(0.03)PIS(0.969)PK	140.16	1.641e-05	14297800.0	2883.8	1501.8	4629.3	3478.5	1737.12	1487.87	1277.81	1848.95	1790.6799999999998	3987.5	True	False	2757.0316049646203	1749.9469237646902	3657.6731931276113	3173.5453057196582	1965.581728116218	1775.3798200077892	1564.3914199917717	1783.9213805051638	1707.4316776490523	3265.325110334988	0.844336019172614	0.5359181290175311	1.1201559016438558	0.9718925982822231	0.6019559038378784	0.5437069081999171	0.47909208643279066	0.5463227458910369	0.5228979106077091	1.0	11.67301092473935	-7.813155150147603	8.8899335368244	0.5818720929552841	0.8621413990045966	0.2789400073362551	0.1942444124764678	0.36786825729353684	58.7070383175676	0.060050919522257426	0.06834179497580915	1.537605238210731e-08	7.813155150147603	0.28026930604931255	
NTSLPPLWS(ph)PEAER	ddPTM_K562_Methotrexat_30min_R1	3	NTSLPPLWSPEAER	14	0	P49790-2;P49790;P49790-3	P49790-2	NUP153	Nuclear pore complex protein Nup153	1	NTSLPPLWS(1)PEAER;NTSLPPLWS(1)PEAER;NT(0.001)S(0.001)LPPLWS(0.999)PEAER	178.22	7.0229e-08	254813000.0	13231.7	11652.2	14612.3	13842.2	11427.3	11387.9	11687.0	13282.400000000001	13112.7	13755.3	True	False	12650.050311190234	13577.527996464858	11545.377918894561	12628.675817401941	12930.190246904333	13588.4505045916	14308.107250251489	12815.250463464019	12503.093439089474	11264.081878417765	1.12304317810651	1.205382572944512	1.024972833428685	1.121145598346437	1.147913375139688	1.2063522487906784	1.2702417653467297	1.137709278198548	1.1099966756319202	1.0	13.459442105600893	-6.0014818751099295	19.10505372849063	1.144350103728172	1.1031255635666497	0.0	0.07764098721488785	7726.957618899086	362.2705975579902	0.018966804860241365	6778.133467861663	9.965936712084956e-07	6.0014818751099295	-0.04122454016152233	
NTT(ph)ST(ph)CIAT(ph)VVGLTGAR	ddPTM_K562_Methotrexat_30min_R1	1	NTTSTCIATVVGLTGAR	17	0	Q96GD3-6;Q96GD3-5;Q96GD3-4;Q96GD3-3;Q96GD3-2;Q96GD3	Q96GD3-6	SCMH1	Polycomb protein SCMH1	3	NT(0.438)T(0.537)S(0.115)T(0.937)CIAT(0.965)VVGLT(0.008)GAR	60.246	0.024728999999999998	12954000.0	1263.2	1375.1	1204.8	1119.3	984.0	1361.2	965.56	1321.3	1330.7	1749.9	True	False	1207.6712405129717	1602.3119022964613	951.9289445661649	1021.1727068253597	1113.4132474822454	1624.2326352400426	1182.1114089631913	1274.8291300800302	1268.8360474499043	1432.976153122305	0.8427713454139363	1.1181706679522834	0.6643020140230605	0.712623657135069	0.776993563400364	1.133468014593969	0.8249344599262829	0.8896373657735412	0.8854551031329051	1.0	10.484798885847313														
NVALLSQLYHS(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	2	NVALLSQLYHSPAR	14	0	Q15717;Q15717-2	Q15717	ELAVL1	ELAV-like protein 1	1	NVALLSQLYHS(1)PAR;NVALLSQLYHS(1)PAR	180.04	1.2366e-05	200397000.0	6704.8	5249.1	7100.6	5709.0	5653.1	5454.299999999999	4826.0	6557.4	6707.700000000001	7733.8	True	False	6410.065020100839	6116.424555555488	5610.281095440331	5208.500833794314	6396.581737136063	6508.2662815087915	5908.3533489957745	6326.772525230301	6395.860491079674	6333.13387794576	1.0121474050032293	0.9657816609333127	0.88586175558002	0.8224207689548737	1.0100183985390314	1.0276533556590213	0.9329272778475087	0.9989955442537521	1.0099045139961986	1.0	12.628703861937717														
NVALLSQLYHS(ph)PARR	ddPTM_K562_Methotrexat_30min_R1	2	NVALLSQLYHSPARR	15	1	Q15717;Q15717-2	Q15717	ELAVL1	ELAV-like protein 1	1	NVALLSQLYHS(1)PARR;NVALLSQLYHS(1)PARR	135.43	2.6385e-05	302600000.0	3721.7	3237.1	4316.5	4291.299999999999	2829.9	2934.3	2678.3	3714.9	3701.0	4290.4	True	False	3558.0985242377524	3771.975753708002	3410.5256384626905	3915.0883916730654	3202.0814522865912	3501.3119465066547	3278.9769528834227	3584.2448613746337	3528.941317811749	3513.3669851739746	1.0127318151654923	1.0736071038480546	0.9707285498084136	1.1143408611153662	0.9113996533237279	0.996568807437939	0.933286208562996	1.020173775327131	1.0044328795436106	1.0	11.778638564335992	-7.766171412224556	24.99993503687457	0.9773806507588512	1.0398971844882512	0.31670775199902335	0.046841438066727595	147.13989726293318	777358.1823008349	0.01368604391536076	0.01603160938674446	1.7132809570689574e-08	7.766171412224556	0.06251653372940003	
NVDNAEGS(ph)DTDY	ddPTM_K562_Methotrexat_30min_R1	1	NVDNAEGSDTDY	12	0	Q15751	Q15751	HERC1	Probable E3 ubiquitin-protein ligase HERC1	1	NVDNAEGS(1)DTDY	113.65	0.0013011	9191800.0	2076.1	2286.0	2803.8	2656.9	1940.8	1910.9	2266.8	2333.9	2118.3	2548.4	True	False	1984.8371298519482	2663.722644643813	2215.3206961940673	2423.973702103365	2196.0492182048188	2280.1543804585663	2775.187602880984	2251.815414132886	2019.8206953581825	2086.8600654991055	0.9511117504552195	1.2764260952047792	1.0615568972825393	1.1615410837446993	1.0523222205987246	1.0926244735596258	1.329838856357268	1.0790447578929203	0.9678754837234909	1.0	11.027118148418595	-9.585996656957217	5.575992786865379	0.9908113377597408	1.1363534019246355	0.2411303088417882	0.1036360805583709	0.2808346249430077	16.865367621298528	0.07010776372750713	0.025541067707866807	2.5941993312557336e-10	9.585996656957217	0.14554206416489468	
NVFSSSGTSFS(ph)GR	ddPTM_K562_Methotrexat_30min_R1	1	NVFSSSGTSFSGR	13	0	P49790-2;P49790;P49790-3	P49790-2	NUP153	Nuclear pore complex protein Nup153	1	NVFSSSGT(0.001)S(0.041)FS(0.958)GR	87.447	0.021681	2603800.0	1209.4	987.8	1425.9	1081.7	1082.5	1002.4	1004.3	1099.8	1256.3	1436.5	True	False	1156.2362240946711	1151.0171602708479	1126.62307607644	986.8690404475936	1224.8677239832637	1196.0996132564055	1229.539840115304	1061.1194106274254	1197.8948872107273	1176.3359300303978	0.9829132942192735	0.9784765821452928	0.9577392369944245	0.8389347084060349	1.041256747085513	1.016801053781888	1.0452285004025434	0.9020547477454037	1.0183272113262514	1.0	10.20008439873228														
NVHS(ph)EDFENR	ddPTM_K562_Methotrexat_30min_R1	2	NVHSEDFENR	10	0	A0A669KBJ7;Q9H2P0	A0A669KBJ7	ADNP	Activity-dependent neuroprotector homeobox protein	1	NVHS(1)EDFENR;NVHS(1)EDFENR	101.56	0.004298	15205500.0	5443.5	3971.3999999999996	6961.700000000001	6159.4	4953.6	4528.5	4176.6	5296.8	5423.0	5741.5	True	False	5204.210257862862	4627.606347742102	5500.534307259517	5619.414965085428	5605.085226349647	5403.568534149673	5113.308868092785	5110.508541745182	5170.885913670119	4701.658713727478	1.10688813772639	0.9842497359986668	1.169913565014737	1.1951983985307926	1.1921505935733756	1.149289827943662	1.0875542397757216	1.086958635858443	1.099800353133381	1.0	12.198954104409566	-12.080542241937263	6.1863711750214625	0.9999997594032914	1.1200389840988505	0.26517025928027527	0.059466749013759354	2.2266226267944545e-07	3.303497365116132e-08	0.06349436526230308	0.0153996141276232	8.307259136720491e-13	12.080542241937263	0.12003922469555905	
NVIPDT(ph)PPSTPLVPSR	ddPTM_K562_Methotrexat_30min_R1	1	NVIPDTPPSTPLVPSR	16	0	Q9UKA4	Q9UKA4	AKAP11	A-kinase anchor protein 11	1	NVIPDT(0.46)PPS(0.46)T(0.071)PLVPS(0.009)R	112.01	0.0026225000000000003	8271600.0	1110.9	1198.7	1572.6	1330.1	952.63	1238.2	1060.1	1189.1	1280.6	1516.9	True	False	1062.066166154102	1396.7648005837877	1242.5327508505563	1213.492198113472	1077.9175426311097	1477.4646260316058	1297.8544105409087	1147.2786790117034	1221.0651855146523	1242.1747109384687	0.85500546485261	1.1244511647870576	1.0002882363559125	0.9769094374789462	0.8677664527695448	1.189417730872475	1.0448243706075562	0.9236049236141098	0.9830059932488336	1.0	10.278652386463671	-6.226511507193723	23.291729460058594	1.0104254957906533	0.8550046400505885	0.22579845974435164	0.0872922591156799	11817.616973450919	7880262.051766977	0.022124871002533776	3.908246052060903	5.93592619979181e-07	6.226511507193723	-0.1554208557400648	
NVPHEDICEDS(ph)DIDGDYR	ddPTM_K562_Methotrexat_30min_R1	2	NVPHEDICEDSDIDGDYR	18	0	O00629	O00629	KPNA4	Importin subunit alpha-3	1	NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR	151.21	5.654899999999999e-13	39191000.0	4366.700000000001	3820.4	4095.5	4465.5	3370.8	3320.3	3379.7	3700.6000000000004	4895.8	3971.3	True	False	4174.745096538947	4451.656164303248	3235.9105183189945	4074.016548136015	3814.1192831434473	3961.900983534759	4137.6837574805295	3570.4478004799516	4668.195326598963	3252.059087316197	1.2837236299984354	1.3688730877202586	0.995034355599446	1.2527498544001392	1.1728320982910239	1.2182745999256637	1.2723273613380763	1.0979037294880485	1.4354583361680093	1.0	11.667137754929774														
NVPNWHR	ddPTM_K562_Methotrexat_30min_R1	2	NVPNWHR	7	0	B4DV51;F5H018;B5MDF5;J3KQE5;P62826	B4DV51	RAN	GTP-binding nuclear protein Ran	0	;	108.24	0.014391999999999999	13156200.0	15913.5	13846.1	18460.2	17182.9	14096.7	13191.1	13739.7	15961.5	16327.8	18102.0	False	True	15213.961594286882	16133.932681540988	14585.656293559354	15676.501835173298	15950.663135958308	15740.093384304248	16821.177478076526	15400.124997935669	15568.724141844552	14823.552388033593	1.026337088171149	1.0883985335772286	0.9839514788191877	1.0575401512951952	1.0760351310145186	1.0618300507380767	1.1347602138644937	1.038895711015095	1.050269445157593	1.0	13.855603603067614	-7.506276563272577	24.70950084624579	1.0661105918204603	1.0354959571759002	0.07716685644905696	0.03966256781120265	1449.8811581689263	2157902.3808874106	0.011045774020035334	0.015881896730598907	3.116904074819695e-08	7.506276563272577	-0.030614634644560157	
NVPQEESLEDS(ph)DVDADFK	ddPTM_K562_Methotrexat_30min_R1	2	NVPQEESLEDSDVDADFK	18	0	O00505	O00505	KPNA3	Importin subunit alpha-4	1	NVPQEES(0.023)LEDS(0.977)DVDADFK;NVPQEES(0.101)LEDS(0.899)DVDADFK	176.1	5.6653e-12	19072300.0	6653.8	3937.3	8921.7	6166.1	4024.8	4122.6	3610.4	5620.299999999999	5647.200000000001	6932.0	True	False	6361.306919035162	4587.871902342994	7049.157092244317	5625.527586487846	4554.13174640909	4919.234103761828	4420.124105100364	5422.630863383631	5384.662904605919	5676.547627546618	1.1206295333744067	0.8082151693891194	1.2418035670196492	0.9910121354727675	0.8022713883891728	0.8665890654894235	0.7786641450255435	0.9552691563916765	0.9485805912163463	1.0	12.470798060359925	-7.5503485129535335	10.757137483871366	0.8839012673019795	1.0460454617869792	0.2819383321883765	0.11884515661841727	0.619158913770506	237.85999538055762	0.03426906438898238	0.0444004892448769	2.8161221405098987e-08	7.5503485129535335	0.16214419448499973	
NVRS(ph)DISDQEEDEES(ph)EGCPVSINLSK	ddPTM_K562_Methotrexat_30min_R1	1	NVRSDISDQEEDEESEGCPVSINLSK	26	1	A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154-4;Q15154-2;Q15154;H0YBA1	A0A5H1ZRS1	PCM1	Pericentriolar material 1 protein	2	NVRS(0.824)DIS(0.472)DQEEDEES(0.628)EGCPVS(0.075)INLSK	55.063	0.026747000000000003	16201000.0	1084.7	747.27	1619.0	1165.9	850.35	994.1	508.77	866.96	1141.2	1164.4	True	False	1037.0178867831069	870.7436660817947	1279.1940249440747	1063.6873571765263	962.1859298745198	1186.1957557244534	622.8746235740945	836.4685254023941	1088.1458610880225	953.5158767333063	1.0875727526801902	0.913192624610421	1.3415550345386216	1.1155423660282004	1.0090927202711262	1.244023077820472	0.6532399079793293	0.8772465627610627	1.141193227758253	1.0	9.897113150435159	-8.737168772450202	24.99995362603467	0.9076901459528676	1.1141962613557967	0.2779706697751131	0.15793152031130112	303.0670615123665	312174.3721245573	0.0606790739277171	0.04697828552576109	1.8316024996387693e-09	8.737168772450202	0.20650611540292918	
NVS(ph)PEFVPCEGEGGFGLHK	ddPTM_K562_Methotrexat_30min_R1	2	NVSPEFVPCEGEGGFGLHK	19	0	O94986-3;O94986	O94986-3	CEP152	Centrosomal protein of 152 kDa	1	NVS(1)PEFVPCEGEGGFGLHK;NVS(1)PEFVPCEGEGGFGLHK	129.29	4.969e-07	52533000.0	5362.700000000001	3602.9	6625.2	5209.9	4177.5	3986.8	3861.7999999999997	4785.7	5841.4	6844.7	True	False	5126.962129115673	4198.2179861711265	5234.6610587149335	4753.156155891575	4726.91447292386	4757.192675708935	4727.906954652274	4617.38421843942	5569.834588993665	5605.058503500912	0.9147026968431069	0.749005203701072	0.9339172919328802	0.8480118722976325	0.8433300865586747	0.8487320288874057	0.8435071554916385	0.8237887643019975	0.993715691908435	1.0	12.452513716081755	-9.768297693596354	24.997924425832792	0.9968579780411199	0.8493829622846883	0.6060056516831129	0.04715579955144707	105.74951691393079	385430.1450966055	0.03890950981679753	0.010934460689774276	1.7049133302361328e-10	9.768297693596354	-0.14747501575643152	
NVSPGESEAFKPE	ddPTM_K562_Methotrexat_30min_R1	3	NVSPGESEAFKPE	13	1	A0A087X1Q6;B6A8C7;B6A8C7-2	A0A087X1Q6	TARM1	T-cell-interacting, activating receptor on myeloid cells protein 1	0	;;	61.48	0.025686	37493000.0	7524.200000000001	8157.9	8985.8	8765.0	7982.4	7548.5	7261.3	7450.599999999999	6915.0	6028.2	False	True	7193.445177222692	9505.854314409347	7099.803378222647	7996.586058540403	9032.22551494134	9007.140792763339	8889.831366154795	7188.5581749597195	6593.523159326735	4936.434565547676	1.4572147329627594	1.9256518420709003	1.4382452119944091	1.6199112846243544	1.8297063183980953	1.824624771819301	1.800860772712077	1.4562247467291567	1.3356853153375512	1.0	12.26925368846142	-9.86177397631585	1.5978927978452073	1.0155017033412312	1.702532029418606	0.664040182995759	0.15739347826153188	0.2087424431548543	1.1418097033908614	0.1483709936018795	0.04401656605671736	1.3747572658385207e-10	9.86177397631585	0.6870303260773747	
NVSSAGHGPRS(ph)SPAELSSSSQHLLR	ddPTM_K562_Methotrexat_30min_R1	4	NVSSAGHGPRSSPAELSSSSQHLLR	25	1	Q9UQC2;Q9UQC2-2;E9PJE2	Q9UQC2	GAB2	GRB2-associated-binding protein 2	1	NVS(0.013)S(0.013)AGHGPRS(0.487)S(0.487)PAELSSSSQHLLR;NVS(0.03)S(0.02)AGHGPRS(0.475)S(0.475)PAELSSSSQHLLR;NVS(0.133)S(0.133)AGHGPRS(0.367)S(0.367)PAELSSSSQHLLR;NVS(0.004)S(0.006)AGHGPRS(0.495)S(0.495)PAELSSSSQHLLR	152.0	1.9706e-27	250052000.0	8687.400000000001	7128.0	9362.4	9902.400000000001	7294.4	6980.8	7686.9	8547.8	8267.3	10626.7	True	False	8305.512297999045	8305.780844716148	7397.360184766149	9034.271966467826	8253.741455726109	8329.740802294808	9410.883000081976	8247.16902906084	7882.955027491243	8702.101655171613	0.9544260257018627	0.9544568856857776	0.8500659355513203	1.038171274533297	0.9484767913301673	0.9572102386719978	1.0814494443981975	0.9477215224393054	0.9058679546459267	1.0	13.08714815474156	-7.271765415788955	24.99882029779571	0.9821478998723084	0.9231303389761487	0.2204947645103652	0.05420030737634078	1148.7847763939733	2781146.4055867493	0.01550816674653019	0.02329540760340955	5.348531823899778e-08	7.271765415788955	-0.059017560896159726	
NVSSFPDDAT(ph)SPLQENR	ddPTM_K562_Methotrexat_30min_R1	1	NVSSFPDDATSPLQENR	17	0	P52292;J3QLL0;J3KS65	P52292	KPNA2	Importin subunit alpha-1	1	NVSSFPDDAT(0.5)S(0.5)PLQENR	120.84	0.00061894	53212000.0	1989.8	1895.4	2798.1	2018.4	1875.4	1983.8	1603.2	2579.9	1970.7	2396.7	True	False	1902.3307745192471	2208.582633708612	2210.8170482989576	1841.4500057681632	2122.047971878255	2367.1412737211253	1962.7584105076733	2489.163454698759	1879.0825871417503	1962.6344055021602	0.9692741394862667	1.12531535548187	1.1264538327163878	0.9382542161727819	1.0812242799418912	1.2061040339886775	1.0000631829367534	1.268276683482414	0.9574287406120182	1.0	10.93857574096532	-7.991904101691517	24.904754765691585	1.1028492386197466	1.0468212804283072	0.030497354259045983	0.10517646236721341	576.1709388125431	1772413.7595474601	0.031040469364445458	0.035138881022252336	1.0188163321432133e-08	7.991904101691517	-0.05602795819143935	
NVSSFPDDATS(ph)PLQENR	ddPTM_K562_Methotrexat_30min_R1	2	NVSSFPDDATSPLQENR	17	0	P52292;J3QLL0;J3KS65	P52292	KPNA2	Importin subunit alpha-1	1	NVSSFPDDAT(0.033)S(0.967)PLQENR;NVSSFPDDAT(0.162)S(0.838)PLQENR	232.15	2.6414999999999994e-51	254762000.0	5763.6	4762.4	6667.3	5825.2	4863.4	4936.7	4690.2	5966.6	5888.6	6267.1	True	False	5510.239045139779	5549.305653040987	5267.924844045476	5314.513760206452	5503.022345330437	5890.647406986131	5742.096742117694	5756.751296098926	5614.84027129594	5132.067460559348	1.073687960551324	1.0813002158853469	1.0264722520758371	1.035550253586733	1.0722817631728205	1.1478117644120183	1.1188661852648092	1.1217216726670802	1.0940698489345217	1.0	12.325324419309238	-8.011417884565844	23.62963743040184	1.106004994185248	1.0541647740627635	0.1832952741811581	0.03971221462110139	351.5482395430187	727541.16072039	0.012288739774286683	0.013021565611742494	9.740519394914106e-09	8.011417884565844	-0.05184022012248435	
NVYSS(ph)SRYDDYDR	ddPTM_K562_Methotrexat_30min_R1	2	NVYSSSRYDDYDR	13	1	O75494-6;O75494-3;Q5JRI1;O75494-5;O75494-4;O75494-2;O75494	O75494-6	SRSF10	Serine/arginine-rich splicing factor 10	1	NVYS(0.002)S(0.773)S(0.225)RYDDYDR;NVYS(0.098)S(0.873)S(0.029)RYDDYDR	209.53	5.1589e-17	321820000.0	4648.200000000001	3633.3999999999996	4434.4	5025.7	3447.5	3038.5	3284.3999999999996	4375.4	4523.8	4749.3	True	False	4443.870693597531	4233.757592759768	3503.680039661519	4585.104683902625	3900.9066775356114	3625.6471217872972	4021.0103065565104	4221.514701999672	4313.489525403081	3889.155748342058	1.1426311984270485	1.088605822629915	0.9008844763172915	1.1789460182604539	1.0030214601712886	0.9322452882821435	1.0339031313597205	1.0854578667360644	1.1091069127899842	1.0	11.925241295947822	-6.528750350870316	24.999977949000044	1.0317919846164354	1.1291249087211948	0.17762543129976305	0.07719041733597398	219.42970765078385	934285.2968033168	0.019717857546653967	0.0525019403389978	2.959713334415169e-07	6.528750350870316	0.09733292410475936	
NWGAVVRSPEGT(ph)PQK	ddPTM_K562_Methotrexat_30min_R1	1	NWGAVVRSPEGTPQK	15	1	C9J0I9;Q86WB0;Q86WB0-3;F8WAU5;F8WBD7;F8WDK5;F8WF13	C9J0I9	ZC3HC1	Nuclear-interacting partner of ALK	1	NWGAVVRS(0.006)PEGT(0.994)PQK	109.84	0.025128	9344400.0	1812.1	1097.8	2162.2	1827.6	1241.8	1193.1	1242.2	1526.4	1530.2	1935.6	True	False	1732.4422537472744	1279.1927905905416	1708.383768211289	1667.3771455320532	1405.1184661823704	1423.6496893218448	1520.7949710158628	1472.715646828244	1459.061335994471	1585.044083652515	1.0929931044915173	0.8070392513265743	1.07781467142198	1.0519437047389957	0.8864854174556894	0.8981767157171054	0.9594654096379459	0.9291322948157847	0.9205178272595838	1.0	10.630307250189192	-7.767407009963705	24.99987105499214	0.9284053746915043	0.9981590088373461	0.1710354821590987	0.07973858090294929	280.33504253496955	1174388.9781659655	0.02416359762775456	0.02811263256739081	1.708413482075128e-08	7.767407009963705	0.06975363414584179	
NWRAT(ph)RDMCRYR	ddPTM_K562_Methotrexat_30min_R1	1	NWRATRDMCRYR	12	3	Q9NZT2-2;Q9NZT2;Q4VXW3;A0A087X028	Q9NZT2-2	OGFR	Opioid growth factor receptor	1	NWRAT(0.974)RDMCRY(0.026)R	68.016	0.024357	0.0	196.29	74.866	200.57	0.0	63.235	64.65899999999999	145.01	241.56	65.788	105.32	True	False	187.66132663100962	87.23633399558346	158.47309795122482	0.0	71.55151087859737	77.15343664559647	177.53218382467415	233.06419788248857	62.729530239448614	86.24552742833374	2.175896330240985	1.0114882081053194	1.8374645349917886	0.0	0.82962575581735	0.8945789879910886	2.0584509031172153	2.702333730594374	0.7273366180243271	1.0	6.430377737471093	-8.75617971181497	24.99716073108784	1.7638914764491593	1.087533599696754	0.08176648030729361	0.7526357683737578	251.75510773520296	1196501.2362698498	0.29371547542502174	0.22060428633562265	1.7531548931669255e-09	8.75617971181497	-0.6763578767524054	
NY(ph)KT(ph)S(ph)S(ph)VPS(ph)Y	ddPTM_K562_Methotrexat_30min_R1	1	NYKTSSVPSY	10	1	A7E2U8	A7E2U8	C4orf47	UPF0602 protein C4orf47	5	NY(0.999)KT(0.828)S(0.828)S(0.828)VPS(0.786)Y(0.731)	41.979	0.033866	94870000.0	2875.9	2562.7	2656.7	3040.5	2759.9	2089.0	2523.9	3029.2	3361.7	3494.1	True	False	2749.4788795054296	2986.1426165479897	2099.0949759536275	2773.9440856807887	3122.8752253315533	2492.669684848993	3089.948822530139	2922.661319033096	3205.415300753246	2861.284631478741	0.960924631285099	1.0436370376073774	0.7336197709449107	0.9694750585673771	1.0914241774393552	0.8711715211501889	1.079916618058799	1.0214507451929502	1.1202713863166611	1.0	11.482447304167916	-8.552381131107545	0.929571405031158	1.0605469905740024	0.9336106233944348	0.18575485794863533	0.09902077575749424	0.9863305885431308	1.7497523791879412	0.06963392988134486	0.048257180811639745	2.8029727064024217e-09	8.552381131107545	-0.12693636717956758	
NY(ph)SIY(ph)LNHT(ph)MLLK	ddPTM_K562_Methotrexat_30min_R1	1	NYSIYLNHTMLLK	13	0	H0YME5;Q9P2K8-2;Q9P2K8	H0YME5	EIF2AK4	Eukaryotic translation initiation factor 2-alpha kinase 4	3	NY(0.947)S(0.186)IY(0.887)LNHT(0.98)MLLK	50.897	0.033981	0.0	271.41	170.78	287.43	203.7	177.32	0.0	162.64	257.68	273.4	214.61	True	False	259.479141377158	198.99849223633882	227.1023709633572	185.84193726465264	200.64068805238998	0.0	199.11616010788913	248.61724834558575	260.68969367461017	175.74204938658096	1.4764772704247917	1.1323328305942337	1.2922483364456425	1.0574699561847882	1.1416771839904933	0.0	1.1330023793559616	1.414671384642276	1.4833655040699412	1.0	7.457315612671354	-7.311857491087677	2.230485640947119	1.0069316691611103	1.2977817820685198	0.08988466195014777	0.3873567059271785	0.9057060229498548	8.804935948917134	0.12866073244285497	0.2335557176244699	4.8768849341466946e-08	7.311857491087677	0.2908501129074095	
NYGYNPS(ph)PVKPEGLR	ddPTM_K562_Methotrexat_30min_R1	2	NYGYNPSPVKPEGLR	15	1	E9PRF4;Q15047-3;Q15047	E9PRF4	SETDB1	Histone-lysine N-methyltransferase SETDB1	1	NYGYNPS(1)PVKPEGLR;NYGY(0.001)NPS(0.999)PVKPEGLR	114.21	0.00084901	50073000.0	3438.9	2575.66	5075.9	3461.3999999999996	2558.1	2315.8	2431.4	3522.3	3340.0	4760.2	True	False	3287.7300736225934	3001.2440362656557	4010.537956277717	3157.944436170192	2894.5349881954576	2763.2955749991847	2976.7033428819595	3398.4187125413564	3184.72412901682	3898.081652718896	0.8434225771872724	0.7699284683203853	1.0288491400585167	0.8101278314597486	0.7425537087394081	0.7088860165542703	0.7636328861417567	0.871818246847388	0.8169977985954933	1.0	11.928548595560313	-12.141592013812197	5.970823933478556	1.0000013740203049	0.8166013623480627	0.2973589759735781	0.08421943602228035	1.6405159344797571e-06	2.3579878139128314e-07	0.08684074864469292	0.021061817393529175	7.217852223663277e-13	12.141592013812197	-0.18340001167224218	
NYPS(ph)QEELIK	ddPTM_K562_Methotrexat_30min_R1	1	NYPSQEELIK	10	0	P38398-8;P38398-4;P38398;P38398-7;K7EPC7;H0Y8B8;B7ZA85;E7EUM2;A0A2R8Y7V5;P38398-6;P38398-5;P38398-3	P38398-8	BRCA1	Breast cancer type 1 susceptibility protein	1	NY(0.01)PS(0.99)QEELIK	89.44	0.015387	11199000.0	1243.2	1282.6	1793.6	1447.2	1000.2	1006.7	789.9	1442.5	1274.5	1791.7	True	False	1188.5504165656482	1494.5278495276277	1417.14787099425	1320.3262229229517	1131.7438314346966	1201.230527399465	967.0551824226615	1391.7664573832174	1215.2487731832134	1467.2057680720238	0.8100775245229974	1.0186218470852295	0.9658821562952604	0.8998916523194435	0.7713599933033662	0.8187198779745376	0.659113536401521	0.9485830056489368	0.8282742609307667	1.0	10.518855500431075	-7.56772339623874	6.186576110796525	0.8255207171098011	0.9392704034495913	0.14810364437581403	0.09999475606091311	0.2911331027928267	27.162713871659314	0.0289789553989871	0.03789467034646636	2.705681073730239e-08	7.56772339623874	0.11374968633979021	
NYQQNYQNS(ph)ESGEK	ddPTM_K562_Methotrexat_30min_R1	1	NYQQNYQNSESGEK	14	0	P67809;H0Y449;C9J5V9	P67809	YBX1	Nuclease-sensitive element-binding protein 1	1	NYQQNYQNS(1)ESGEK	157.38	5.1265e-08	5274300.0	751.18	531.73	1214.0	903.65	766.98	684.49	664.46	703.94	722.3	1569.5	True	False	718.1590266375349	619.5893446353698	959.197990291603	824.4284075071351	867.8513135710698	816.7580050657197	813.4820692651745	679.1820312030095	688.7204306553435	1285.2483412340473	0.5587706310112687	0.48207752911041557	0.7463133462367413	0.6414545586696108	0.6752401740023188	0.6354865272819564	0.6329376534997894	0.5284441997807866	0.5358656444512973	1.0	10.32783143478187	-12.358680014742925	3.142889772603451	1.003784684416653	0.607403669160984	0.7160017328288386	0.07478093805598916	22840353.610084675	30125708.437987104	794450.4592524193	0.020098747402502393	4.3784458729320813e-13	12.358680014742925	-0.39638101525566893	
NYQQNYQNS(ph)ESGEKNEGSESAPEGQAQQR	ddPTM_K562_Methotrexat_30min_R1	7	NYQQNYQNSESGEKNEGSESAPEGQAQQR	29	1	P67809;H0Y449;C9J5V9	P67809	YBX1	Nuclease-sensitive element-binding protein 1	1	NYQQNY(0.13)QNS(0.761)ES(0.104)GEKNEGS(0.004)ES(0.001)APEGQAQQR;NYQQNY(0.041)QNS(0.468)ES(0.314)GEKNEGS(0.124)ES(0.053)APEGQAQQR;NYQQNY(0.001)QNS(0.856)ES(0.137)GEKNEGS(0.006)ESAPEGQAQQR;NYQQNY(0.017)QNS(0.965)ES(0.017)GEKNEGSESAPEGQAQQR;NYQQNY(0.007)QNS(0.931)ES(0.055)GEKNEGS(0.005)ES(0.001)APEGQAQQR;NYQQNY(0.001)QNS(0.971)ES(0.028)GEKNEGSESAPEGQAQQR;NYQQNY(0.006)QNS(0.958)ES(0.034)GEKNEGS(0.001)ESAPEGQAQQR	116.38	7.446899999999999e-13	1368446400.0	8546.740000000002	5820.75	9940.349999999999	9342.99	5167.110000000001	4931.26	5285.569999999999	6261.6900000000005	7672.790000000001	10049.630000000001	True	False	8171.0355431775215	6782.530001666874	7854.0063779202155	8523.904572627769	5846.675533737793	5884.156203977237	6470.993620151595	6041.46281354032	7316.083667628425	8229.544624094242	0.9928903622752808	0.8241683241876061	0.9543670684919144	1.0357686800399268	0.7104494599397458	0.715003863852899	0.7863124772670886	0.7341187258226033	0.889002247610225	1.0	13.006596887029877	-7.765096927986978	24.999999728210657	0.7870047708381762	0.9428656211943192	0.3390010072676246	0.09745129775127347	100.24596802447972	685199.1620500076	0.02909988374319039	0.03429269697861755	1.7175250186634955e-08	7.765096927986978	0.15586085035614294	
NYQQNYQNSES(ph)GEKNEGSESAPEGQAQQR	ddPTM_K562_Methotrexat_30min_R1	1	NYQQNYQNSESGEKNEGSESAPEGQAQQR	29	1	P67809;H0Y449;C9J5V9	P67809	YBX1	Nuclease-sensitive element-binding protein 1	1	NYQQNY(0.065)QNS(0.155)ES(0.387)GEKNEGS(0.196)ES(0.196)APEGQAQQR	53.097	0.005628899999999999	34446000.0	377.15	231.32	543.02	344.72	263.41	414.1	300.67	289.88	351.04	382.71	True	False	360.5709375866589	269.5416982322866	429.0475228073696	314.49893281232727	298.05303203180716	494.1189643350732	368.1029012520845	279.68475609445204	334.7202270209772	313.39751046427665	1.150522660669825	0.8600633037351806	1.3690202011233767	1.0035144578730666	0.951038288690495	1.5766524871338967	1.1745559200734097	0.8924281360120522	1.0680372876131417	1.0	8.29184990929451	-9.244868846896749	24.052940328915323	0.9851745317338846	1.1544765767741005	0.1318610965088477	0.19779385562247592	1027.6639974502584	1491708.7463649625	0.09559914480985539	0.05496632907448066	5.690247453538551e-10	9.244868846896749	0.16930204504021595	
NYQSQADIPIRS(ph)PFGIVK	ddPTM_K562_Methotrexat_30min_R1	2	NYQSQADIPIRSPFGIVK	18	1	Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4	Q14966-3	ZNF638	Zinc finger protein 638	1	NYQSQADIPIRS(1)PFGIVK;NYQSQADIPIRS(1)PFGIVK	79.347	0.0072491	32676000.0	6613.799999999999	4965.5	8990.8	7721.1	5430.9	4995.5	4402.1	5604.6	6434.9	8507.0	True	False	6323.0652711405155	5785.964475931259	7103.753946551682	7044.203150781101	6145.158542430208	5960.809674802844	5389.382983343207	5407.483041282477	6135.742903536028	6966.299865484576	0.9076648139235222	0.8305649466223181	1.0197312897407904	1.011182878543961	0.8821266183038119	0.8556636650593291	0.7736363761838038	0.7762346074240277	0.8807750200269661	1.0	12.766176859960598	-7.985221787206714	6.349900744476176	0.8410608342450813	0.9409692136149197	0.19790449819961675	0.07762719204809039	0.2233434651895467	36.32239321144967	0.025310809671763947	0.027979634629326428	1.0346136711826115e-08	7.985221787206714	0.09990837936983843	
NYS(ph)SPPPCHLSR	ddPTM_K562_Methotrexat_30min_R1	2	NYSSPPPCHLSR	12	0	Q12986-3;Q12986-2;Q12986	Q12986-3	NFX1	Transcriptional repressor NF-X1	1	NYS(0.5)S(0.5)PPPCHLSR;NYS(0.5)S(0.5)PPPCHLSR	136.83	5.0045999999999995e-06	107230000.0	7069.5	5978.0	9051.0	7637.7	6566.5	6567.1	6093.6	8051.1	7682.0	8802.4	True	False	6758.733244780291	6965.762891373893	7151.318789233364	6968.114699294247	7430.10984714651	7836.099132298624	7460.244916585305	7767.938249593078	7324.865496738686	7208.200063000048	0.9376450689088269	0.9663664757488357	0.9921088103452265	0.9666927441514604	1.0307857415453177	1.0871089958395583	1.0349664065068076	1.0776529760135523	1.0161850992923303	1.0	12.815423338251462	-7.823950900070877	4.111097968123386	1.0485505321448196	0.9671310746716295	0.6449609430239369	0.027332659877105592	0.12718070253668812	4.2902792766932984	0.008318475202989107	0.009783277806989836	1.4998543946029133e-08	7.823950900070877	-0.08141945747319013	
NYYEQWGK	ddPTM_K562_Methotrexat_30min_R1	1	NYYEQWGK	8	0	P22626;P22626-2;A0A087WUI2	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	0		124.23	0.026913	16903000.0	2909.6	2043.2	3947.9	3136.6	2116.9	1614.4	1858.0	2999.6	2783.3	3612.9	False	True	2781.697467856668	2380.8040715381635	3119.289741245652	2861.6191478856613	2395.309454873135	1926.3599517569235	2274.7037966088183	2894.102367810536	2653.9049905067386	2958.568800283203	0.9402172657233442	0.8047147902425882	1.0543238815156384	0.967230894752807	0.809617628173409	0.6511121024370049	0.7688527629950931	0.97821026421069	0.8970232465956847	1.0	11.530683729411423	-5.822940227179424	15.65597884060569	0.8755154835598828	39.24001679158815	0.020148911633336652	0.11746422295229236	1550886.2210963394	1985791.9397899983	0.03175029091912856	2110280964.102624	1.503348860770893e-06	5.822940227179424	38.36450130802827	
PAQS(ph)EASPVASPDPQR	ddPTM_K562_Methotrexat_30min_R1	2	PAQSEASPVASPDPQR	16	0	B9DI78	B9DI78	FAM184A		1	PAQS(0.5)EAS(0.5)PVASPDPQR;PAQS(0.5)EAS(0.5)PVASPDPQR	85.56299999999999	0.010889	159992000.0	162.45	209.6	290.66	176.16	107.86	142.91	188.66	0.0	172.06	257.82000000000005	True	False	155.3088925121377	244.23283740916156	229.65443810391875	160.71632630604418	122.04548056243391	170.52533492664892	230.97180746405792	0.0	164.06096815527957	211.12629967312017	0.7356207765332755	1.1568091601439476	1.0877585523901336	0.7612330939104978	0.5780685814670785	0.8076934763251553	1.0939982741215277	0.0	0.7770749944904529	1.0	7.721962493920126	-7.392771729244846	4.738270264825142	0.6826958022151581	1.0076222992576356	0.15204285404873008	0.2958249907228296	0.3820365420789126	13.027010251554042	0.084868296603098	0.12768345988429528	4.047885978757101e-08	7.392771729244846	0.32492649704247745	
PAT(ph)S(ph)PKPLPS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	PATSPKPLPSPK	12	1	Q6ZU65	Q6ZU65	UBN2	Ubinuclein-2	3	PAT(1)S(1)PKPLPS(1)PK	60.541000000000004	0.033144	0.0	1939.4	2029.5	2180.3	2435.8	2028.5	2353.0	2327.7	2456.5	2031.3	2258.0	True	False	1854.1462981719899	2364.8403793983484	1722.6848255624236	2222.257195823471	2295.2833054042035	2807.6839485158853	2849.7459781304324	2370.103502642547	1936.8653063688216	1849.05431953264	1.0027538285844608	1.2789458667693854	0.9316572300579266	1.2018344579434317	1.2413282190565125	1.51844319491141	1.5411910553556498	1.281792253264688	1.0474896739963684	1.0	10.852571891972756	-7.663720397963196	2.9548926653480585	1.3143134075374991	1.0901247163033585	0.1663845329487742	0.1840642243111033	0.4050312978728832	7.112571881786926	0.0591403249723747	0.07832043223497082	2.1691001382811295e-08	7.663720397963196	-0.22418869123414065	
PCSEETPAIS(ph)PSKR	ddPTM_K562_Methotrexat_30min_R1	4	PCSEETPAISPSKR	14	1	P33316-2;H0YNJ9	P33316-2	DUT	Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial	1	PCSEETPAIS(0.68)PS(0.32)KR;PCSEET(0.002)PAIS(0.707)PS(0.291)KR;PCSEETPAIS(0.996)PS(0.004)KR;PCSEETPAIS(0.5)PS(0.5)KR	141.59	7.3143e-06	1174830000.0	16196.8	10937.1	24957.4	16994.0	10800.8	9181.0	9402.6	13109.4	13787.5	19161.2	True	False	15484.808065500714	12744.269876086555	19719.18280305079	15504.162404887114	12221.294515656744	10955.098313355009	11511.372399350954	12648.334971521352	13146.522134377063	15690.92100417574	0.9868641911701567	0.8122066176163267	1.2567256439442294	0.9880976649338223	0.7788768111447605	0.6981807065652544	0.7336326781766026	0.8060925785143727	0.8378426053434627	1.0	13.93764241567702	-7.730284937998199	6.001557436976145	0.7897811543457691	1.01641228856041	0.3758309460424021	0.12615978950076048	0.17805988877501827	18.277877584718453	0.03802207424652168	0.048061347567377816	1.8608658331778284e-08	7.730284937998199	0.22663113421464098	
PCSEETPAISPS(ph)KR	ddPTM_K562_Methotrexat_30min_R1	1	PCSEETPAISPSKR	14	1	P33316-2;H0YNJ9	P33316-2	DUT	Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial	1	PCSEETPAIS(0.007)PS(0.993)KR	140.68	8.38e-06	976690000.0	3497.8	2534.7	6162.3	4109.5	2140.3	2177.8	2141.6	3182.4	3087.0	4528.5	True	False	3344.0409001474613	2953.5160924666106	4868.917442812149	3749.22651541036	2421.7869650266775	2598.6290280824014	2621.908315832854	3070.47318819851	2943.4860437948864	3708.3447679378028	0.9017610576718492	0.7964513218950379	1.312962452927411	1.011024257460099	0.6530641341563893	0.700751734453075	0.7070292758380413	0.8279902167526859	0.7937465980089409	1.0	11.856559663434536	-7.744245006337803	24.709249423593338	0.7641758722422511	1.0125723423967672	0.34313969272906264	0.15146549637975154	232.82708134948055	334583.5627302031	0.04585348888850086	0.05904162855943297	1.8020008589761487e-08	7.744245006337803	0.24839647015451605	
PCTPRGMQPERTRPK	ddPTM_K562_Methotrexat_30min_R1	2	PCTPRGMQPERTRPK	15	3	K7EQ55;K7EK33;Q96EP5-2;Q96EP5	K7EQ55	DAZAP1	DAZ-associated protein 1	0	;	71.529	0.023025	121113000.0	7296.8	5843.9	11192.9	8629.7	5637.4	5068.799999999999	5281.700000000001	7219.5	6599.7	9278.599999999999	False	True	6976.041408941623	6809.505145684156	8843.663250028743	7873.147599473598	6378.816911947569	6048.273862404296	6466.255674138209	6965.586092948449	6292.881387506676	7598.155628527697	0.9181229958951732	0.8962050106104027	1.1639223625302855	1.0361919371476715	0.8395217502518567	0.7960186863895912	0.8510296432808367	0.9167469624859708	0.8282116996761297	1.0	12.891433546836872	-7.762739933411715	24.99792614264927	0.862919064495132	1.007389604266308	0.3578245219853584	0.08586053589605856	37.53665646913557	721496.4508196084	0.027165991774346487	0.032522772928625314	1.7268716771389523e-08	7.762739933411715	0.14447053977117597	
PCVLTGT(ph)PES(ph)IEQAK	ddPTM_K562_Methotrexat_30min_R1	1	PCVLTGTPESIEQAK	15	0	Q96I24;Q96I24-2	Q96I24	FUBP3	Far upstream element-binding protein 3	2	PCVLT(0.543)GT(0.818)PES(0.639)IEQAK	108.17	0.022882	5860800.0	904.77	1224.5	1425.4	1054.8	1465.5	1299.1	1105.1	1365.6	1339.4	1482.4	True	False	864.9973941410088	1426.8278120587718	1126.2280192435355	962.3273216826484	1658.2389371801116	1550.1326891274898	1352.9468060454271	1317.5710739705519	1277.1315863488405	1213.9229952503042	0.712563644914438	1.1753857679947548	0.9277590289088424	0.7927416528461279	1.36601657903201	1.276961302481844	1.1145244066873097	1.0853827459614735	1.0520696875714945	1.0	10.24546119233966	-7.749564539500428	24.99955240354266	1.1580866543998107	0.9234639560331733	0.389655671662714	0.15027675972483	255.8862277249856	538703.0731113593	0.04537069985143668	0.058095795484090884	1.780063358090539e-08	7.749564539500428	-0.2346226983666374	
PDSAVYLNS(ph)GSSLLGGLR	ddPTM_K562_Methotrexat_30min_R1	1	PDSAVYLNSGSSLLGGLR	18	0	O60296	O60296	TRAK2	Trafficking kinesin-binding protein 2	1	PDSAVYLNS(0.386)GS(0.386)S(0.228)LLGGLR	90.706	0.0039146	6514100.0	953.27	993.89	992.41	1483.5	751.23	1037.0	796.98	740.04	806.21	818.12	True	False	911.3653922132693	1158.1134292585484	784.1167030850827	1353.4438582823368	850.0299125061863	1237.3855735703237	975.7230526487062	714.0123737413348	768.729473070254	669.9505402551121	1.3603472755857893	1.7286551165665867	1.1704098376971186	2.0202145934040976	1.2687950250514035	1.8469804847073288	1.4564105766332516	1.0657687856620646	1.147442127261406	1.0	9.387910780923423	-9.190338166725525	4.129840264797412	1.076772474620905	1.5678920671649264	0.4439010231233924	0.24757760696123532	0.1980665441546008	6.535668791434329	0.11704709154150506	0.06314076026039	6.451516811045599e-10	9.190338166725525	0.49111959254402127	
PDY(ph)FS(ph)SVAT(ph)VVYLRK	ddPTM_K562_Methotrexat_30min_R1	1	PDYFSSVATVVYLRK	15	1	P27694	P27694	RPA1	Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed	3	PDY(0.937)FS(0.739)S(0.314)VAT(0.752)VVY(0.257)LRK	53.188	0.033622000000000006	78414000.0	1805.6	1689.4	1905.7	1729.3	1685.2	1683.2	1815.4	1843.1	1681.7	1790.3	True	False	1726.227985964395	1968.5446351099115	1505.7196129313902	1577.6949539114578	1906.833338066138	2008.454578045872	2222.549662197872	1778.2771283209747	1603.518134062151	1466.0593216383024	1.177461212166611	1.342745553372348	1.0270523100311983	1.0761467361009676	1.3006522382295391	1.36996815094866	1.516002544640691	1.2129639654238362	1.0937607437809815	1.0	10.517727765556653	-7.781631702839892	24.939451020834934	1.2789489047172373	1.1600010730548755	0.0599194791875135	0.15486073587413357	544.1813465959999	672112.6208935535	0.05000729783672142	0.05677261738161065	1.6533633147461623e-08	7.781631702839892	-0.11894783166236178	
PEENLILDAQATS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	PEENLILDAQATSR	14	0	P98095;P98095-2	P98095	FBLN2	Fibulin-2	1	PEENLILDAQAT(0.088)S(0.912)R	106.55	0.0022399	124670000.0	1355.3	1311.4	1502.7	1665.8	1105.8	1034.2	1249.3	1071.6	1122.7	1550.0	True	False	1295.7226347903982	1528.0865600113295	1187.3038056105372	1519.7619003213463	1251.2320823840107	1234.0445131980998	1529.4873267510209	1033.9112206113382	1070.505922050054	1269.2799801929107	1.0208327989175947	1.2039003087239148	0.9354152150340271	1.197341740228477	0.9857809954536926	0.9722397992998711	1.2050039003361281	0.8145651367275168	0.8433962078936705	1.0	10.309794621361355	-9.275460448834286	24.99028415747717	0.8717354921176024	1.0713931693329992	0.40166402520480715	0.10488258799882781	753.0891996929007	1342251.8482619973	0.053767944583363786	0.026020741583488605	5.303218868043439e-10	9.275460448834286	0.19965767721539684	
PERFT(ph)LY(ph)SS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	PERFTLYSSK	10	1	E7EUK8;O94921-3;O94921-2;O94921	E7EUK8	CDK14	Cyclin-dependent kinase 14	3	PERFT(0.983)LY(0.975)S(0.044)S(0.998)K	108.68	0.017349	44599000.0	1593.2	1395.7	1495.6	1485.1	1328.6	1675.0	1659.1	1466.3	1424.3	1708.3	True	False	1523.1648356438154	1626.3157021563313	1181.6939985832964	1354.9035887664973	1503.3341876066165	1998.6700440986426	2031.1954084788417	1414.7293978932478	1358.0846038798363	1398.9103162345477	1.0888223626398896	1.1625589455469107	0.8447246294988136	0.9685421381504259	1.0746465803849006	1.4287335084342436	1.4519840084861324	1.0113081456867659	0.9708160617010803	1.0	10.450087759336991	-8.013005139345564	24.283762268402757	1.1975109691268988	1.0152759969114162	0.1469699794567687	0.17368540619342593	778.9338859011874	1454461.5697348716	0.060800031174171404	0.06367078899727721	9.704984825115341e-09	8.013005139345564	-0.18223497221548257	
PFS(ph)GTTPSR	ddPTM_K562_Methotrexat_30min_R1	1	PFSGTTPSR	9	0	A0A1B0GTR0	A0A1B0GTR0			1	PFS(0.333)GT(0.333)T(0.333)PSR	87.75399999999999	0.016189	13132000.0	2220.5	1909.8	2428.7	2324.3	2013.7	2484.5	2324.6	2377.1	1967.9	2365.2	True	False	2122.8894787516274	2225.361988950461	1918.9490601492737	2120.532227708552	2278.536845990851	2964.5944624257177	2845.9507242178984	2293.496045646895	1876.4127585305973	1936.8393607434018	1.096058620956988	1.1489656984750238	0.9907631469306462	1.0948415602699466	1.176420147263167	1.5306351794130417	1.4693788147332774	1.1841436580298534	0.9688014383445763	1.0	10.919488588077035	-8.000770049698357	13.788797938246326	1.2677430021551919	1.0876569777882799	0.12544486815196743	0.17061064997115863	0.2121045956909286	3175.34908831753	0.05706484751993358	0.06280040997539216	9.982284660656262e-09	8.000770049698357	-0.180086024366912	
PGGATSSNRT(ph)LKASLPR	ddPTM_K562_Methotrexat_30min_R1	1	PGGATSSNRTLKASLPR	17	2	K7EP10;Q96C55	K7EP10	ZNF524	Zinc finger protein 524	1	PGGATSS(0.024)NRT(0.943)LKAS(0.032)LPR	44.816	0.03209	23984000.0	736.58	626.43	865.37	759.44	952.26	933.65	658.39	1029.7	624.18	690.68	True	False	704.2008251559886	729.9369100105968	683.740662980762	692.861074306666	1077.4988811457754	1114.0646487598192	806.0507172493434	993.4848673604836	595.1620080388377	565.5911591739612	1.2450704254013891	1.290573408319643	1.2088955986853767	1.2250210475683194	1.9050843770603647	1.9697349060174434	1.4251473068047429	1.7565424268856251	1.0522830818431894	1.0	9.143615759151938	-7.699059184498016	24.99998427034929	1.573892645609216	1.2434376685193345	0.15017367926584357	0.3044752434707384	105.86875575293698	42427.70329950245	0.0888340075374869	0.1146841776967348	1.999589352340435e-08	7.699059184498016	-0.3304549770898815	
PGLQT(ph)AGGSRAPS(ph)QQPS(ph)QAR	ddPTM_K562_Methotrexat_30min_R1	1	PGLQTAGGSRAPSQQPSQAR	20	1	F5H465	F5H465	TMEM120B		3	PGLQT(0.996)AGGS(0.259)RAPS(0.745)QQPS(1)QAR	73.722	0.016904	22755000.0	0.0	0.0	0.0	93.458	0.0	50.523	0.0	70.67	0.0	0.0	True	False	0.0	0.0	0.0	85.26468224290576	0.0	60.28585470925118	0.0	68.18449604386268	0.0	0.0											0.0														
PGLQT(ph)AGGSRAPSQQPS(ph)QAR	ddPTM_K562_Methotrexat_30min_R1	2	PGLQTAGGSRAPSQQPSQAR	20	1	F5H465	F5H465	TMEM120B		2	PGLQT(0.934)AGGS(0.055)RAPS(0.011)QQPS(1)QAR;PGLQT(0.962)AGGS(0.037)RAPSQQPS(1)QAR	111.72	0.00061016	122094000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
PGPTPSGTNVGSSGRS(ph)PSK	ddPTM_K562_Methotrexat_30min_R1	5	PGPTPSGTNVGSSGRSPSK	19	1	P60468	P60468	SEC61B	Protein transport protein Sec61 subunit beta	1	PGPTPSGTNVGS(0.048)S(0.375)GRS(0.566)PS(0.011)K;PGPTPSGTNVGS(0.03)S(0.051)GRS(0.902)PS(0.017)K;PGPTPSGTNVGS(0.022)S(0.056)GRS(0.84)PS(0.082)K;PGPTPSGTNVGS(0.001)S(0.011)GRS(0.989)PSK;PGPTPSGTNVGS(0.001)S(0.038)GRS(0.948)PS(0.013)K	132.52	3.6985999999999995e-07	360276000.0	13069.9	9148.44	21329.6	13442.4	8649.5	7486.03	7173.26	10133.84	11109.0	15377.199999999999	True	False	12495.362845456373	10660.064213108168	16852.808446230454	12263.925662672398	9787.06085782285	8932.599349387316	8782.046155038846	9777.427103284812	10592.54501474486	12592.240071885433	0.9923065931179825	0.8465582098381991	1.3383487250896327	0.9739272434976792	0.7772295319936221	0.7093733361493829	0.6974173066034877	0.7764644771278444	0.8411962410401249	1.0	13.620247330845555	-7.6746294698744375	4.447876629401536	0.7792129581072588	1.0542082553361234	0.4144760213266532	0.13899170473052253	0.1970381399831564	7.061504130885115	0.04207470204451969	0.05437214102188856	2.1152929898137563e-08	7.6746294698744375	0.2749952972288646	
PGPTPSGTNVGSSGRS(ph)PSKAVAAR	ddPTM_K562_Methotrexat_30min_R1	1	PGPTPSGTNVGSSGRSPSKAVAAR	24	2	P60468	P60468	SEC61B	Protein transport protein Sec61 subunit beta	1	PGPTPS(0.002)GTNVGS(0.01)S(0.075)GRS(0.893)PS(0.02)KAVAAR	62.847	0.0038358000000000003	78787000.0	2688.0	1818.0	4528.5	3386.8	1849.1	1525.7	1951.5	2069.3	1995.4	3461.9	True	False	2569.8387385203205	2118.393599283664	3578.029735614107	3089.884502346223	2092.2890608937196	1820.5199321082378	2389.173551712653	1996.5215461095945	1902.6342895329817	2834.916363503122	0.9064954337293946	0.7472508277690257	1.2621288520810947	1.0899385047564634	0.7380426060641403	0.6421776513570973	0.8427668563598604	0.7042611809691915	0.6711430058493457	1.0	11.4690904576641	-7.7723521068729715	24.995554039531267	0.7492189309783962	1.001915750907202	0.3520815669044276	0.15516453031551256	232.81536513269916	533260.7838966595	0.04939594442316422	0.056542619861243926	1.6890709518877268e-08	7.7723521068729715	0.2526968199288059	
PGPTQTLS(ph)PNGENNNDIIQDNNGTIIPFRK	ddPTM_K562_Methotrexat_30min_R1	1	PGPTQTLSPNGENNNDIIQDNNGTIIPFRK	30	1	Q15555-2;Q15555	Q15555-2	MAPRE2	Microtubule-associated protein RP/EB family member 2	1	PGPT(0.022)QT(0.145)LS(0.834)PNGENNNDIIQDNNGTIIPFRK	53.798	0.01296	0.0	613.67	305.98	797.16	591.45	464.46	405.26	512.97	489.78	457.51	620.22	True	False	586.6938015877104	356.53799422927125	629.8470098359592	539.5984967853648	525.5446310219548	483.5707594456212	628.0165804878501	472.55415979005306	436.24045996002525	507.8921479453206	1.1551543058131184	0.7019954840248012	1.240119604888572	1.0624273262902613	1.0347563614599034	0.9521130842481191	1.2365156323611093	0.9304222593355155	0.8589234185345009	1.0	8.988378359717005	-9.484161447892738	24.96446897348984	0.9178651027056588	1.046699836383987	0.12542317198334452	0.14952646034231898	1028.2199392294115	662987.1254879151	0.07888177090730221	0.03788133953420008	3.2797334717245015e-10	9.484161447892738	0.1288347336783282	
PGTMEQAIRTPRT(ph)AYTAR	ddPTM_K562_Methotrexat_30min_R1	1	PGTMEQAIRTPRTAYTAR	18	2	G3V2Z9;G3V324;H0YJX0;A0A0C4DGH8;A0A0C4DGY3;A0A0C4DGX9;Q8TAM2-6;Q8TAM2-3;Q8TAM2-4;Q8TAM2	G3V2Z9	TTC8	Tetratricopeptide repeat protein 8	1	PGTMEQAIRT(0.03)PRT(0.878)AY(0.003)T(0.089)AR	75.91199999999999	0.013128	21911000.0	568.47	401.78	515.86	717.53	618.2	520.56	501.29	671.01	607.01	746.69	True	False	543.4807394667588	468.16731590769547	407.5880356440086	654.6252589371927	699.5041357657767	621.1508526304415	613.7170431657879	647.4101979679117	578.7902375911669	611.4572054259637	0.8888287432775447	0.7656583514811193	0.6665847291145546	1.0705986504503722	1.1439952453883935	1.0158533534619563	1.0036958232232294	1.0587988696885202	0.9465752181102522	1.0	9.256107720939166	-7.271489542765542	24.982541493101706	1.0392039577939691	0.7728873808845356	0.7436693176637224	0.07004915672933242	324.8622538701745	807536.9753160881	0.020286683171652747	0.03049076341746862	5.351930403539106e-08	7.271489542765542	-0.26631657690943356	
PKDRAT(ph)NSKATTPK	ddPTM_K562_Methotrexat_30min_R1	1	PKDRATNSKATTPK	14	3	Q92954-5;Q92954-4;Q92954-3;Q92954-6;Q92954-2;Q92954	Q92954-5	PRG4	Proteoglycan 4;Proteoglycan 4 C-terminal part	1	PKDRAT(0.778)NS(0.215)KAT(0.004)T(0.003)PK	61.593	0.030657	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
PKS(ph)S(ph)MAS(ph)TS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	PKSSMASTSR	10	1	F2Z390;A0A140TA04;A0A0A0MRT5;Q9UBC1-3;Q9UBC1	F2Z390	NFKBIL1	NF-kappa-B inhibitor-like protein 1	4	PKS(0.992)S(0.993)MAS(0.773)T(0.255)S(0.987)R	62.338	0.030268	203000000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
PLDEGY(ph)GIS(ph)S(ph)VPSASNS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	PLDEGYGISSVPSASNSK	18	0	E9PI26;P32780-2;P32780	E9PI26	GTF2H1	General transcription factor IIH subunit 1	4	PLDEGY(0.998)GIS(0.949)S(0.949)VPS(0.111)AS(0.229)NS(0.764)K	49.28	0.031457	0.0	212.36	141.65	292.67	343.3	284.19	61.467	256.71	149.59	238.82	381.4	True	False	203.02490867268432	165.05525486167818	231.2425665721941	313.2034220076349	321.56596626217396	73.34462782126046	314.28375222144757	144.32883491158086	227.71731032688518	312.3247641584361	0.6500442231013543	0.5284731593616091	0.7403913909781723	1.0028132826789011	1.0295884385877578	0.2348344935723835	1.0062722790115282	0.4621114028549005	0.7291042416712392	1.0	8.286903154625149	-6.840515591977006	6.877855801010046	0.7635723623452665	0.5902676546722728	0.08082723031704597	0.24941398051375277	0.5652204201661717	39.912565045716605	0.06498071735250943	0.13789429804654477	1.4437247709645958e-07	6.840515591977006	-0.17330470767299366	
PLPPAT(ph)CRPAGIVS(ph)GPSPR	ddPTM_K562_Methotrexat_30min_R1	1	PLPPATCRPAGIVSGPSPR	19	1	Q5SNV9;Q5SNV9-2	Q5SNV9	C1orf167	Uncharacterized protein C1orf167	2	PLPPAT(1)CRPAGIVS(0.857)GPS(0.143)PR	66.02199999999999	0.017731	38785000.0	317.36	198.23	260.32	330.08	265.8	239.51	269.11	319.55	361.97	360.32	True	False	303.4092343961343	230.98413816611694	205.6823894832867	301.1423988822607	300.7573589235578	285.7919177683977	329.46476787158184	308.3112453773358	345.14209370665185	295.06255642781247	1.028287825027246	0.7828310747474581	0.6970806190164872	1.0206052659749651	1.0193003224966586	0.9685807688659308	1.1165929417146696	1.0449012884247977	1.1697251521342777	1.0	8.20487704350526	-7.403522881422769	6.6533706110997395	1.0513323983776932	0.8315528554504817	0.5201359815451995	0.09386585629574194	0.19211642171301008	9.734861276267607	0.026910706308386965	0.040028231812649334	3.948908934122456e-08	7.403522881422769	-0.21977954292721147	
PMEY(ph)APRDGILF	ddPTM_K562_Methotrexat_30min_R1	1	PMEYAPRDGILF	12	1	Q8NCR9-2;Q8NCR9	Q8NCR9-2	CLRN3	Clarin-3	1	PMEY(1)APRDGILF	58.676	0.032747000000000005	0.0	1104.6	871.86	1469.9	1068.7	1001.3	899.89	941.19	1021.7	979.82	1341.0	True	False	1056.0431066106944	1015.920045913891	1161.388077372016	975.008730263791	1132.988500715419	1073.7810065575688	1152.275816108855	985.7662318949267	934.2683820638505	1098.1319054443181	0.9616723650183043	0.9251348047326217	1.0576034369041518	0.8878794299936946	1.031741719822809	0.9778251603782547	1.0493054708601965	0.8976756134738414	0.8507797446116764	1.0	10.10083564310423	-9.296684257391592	24.42483164954648	0.9056707150383908	0.9828335390210073	0.20256911858471172	0.06098715434796433	655.9096590477174	454543.76661685616	0.0315714873454242	0.015167624244829824	5.05028331956722e-10	9.296684257391592	0.07716282398261654	
PMGKVVT(ph)Y(ph)GMANLLTGPK	ddPTM_K562_Methotrexat_30min_R1	1	PMGKVVTYGMANLLTGPK	18	1	K7ESA3;Q99536-2;Q99536-3;Q99536	K7ESA3	VAT1	Synaptic vesicle membrane protein VAT-1 homolog	2	PMGKVVT(1)Y(0.999)GMANLLT(0.001)GPK	70.094	0.015302000000000001	15553000.0	2245.4	1289.2	3204.7	2267.6	1365.5	1129.8	984.29	1813.8	1698.5	2409.8	True	False	2146.6949045660444	1502.2183873468093	2532.0772648167213	2068.8030286761236	1545.087184387201	1348.117860192624	1205.0420882476287	1750.0076259283742	1619.5371057290608	1973.3618685605659	1.0878364170135268	0.7612483099425531	1.2831287079970286	1.0483647533866536	0.7829720483624413	0.6831579558066483	0.6106543900772875	0.8868153650931172	0.8206995034876212	1.0	10.946439821619398	-7.765067129101338	11.695791369029534	0.7766253387122448	1.0419149439745878	0.37671268437896976	0.15472912263245392	0.1643247558907849	459.03634434476743	0.04739509561691162	0.056604913580522616	1.717642869775226e-08	7.765067129101338	0.265289605262343	
PMVTHGLS(ph)HPVALTFT(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	PMVTHGLSHPVALTFTK	17	0	Q6VVB1	Q6VVB1	NHLRC1	E3 ubiquitin-protein ligase NHLRC1	2	PMVT(0.004)HGLS(0.996)HPVALT(0.423)FT(0.577)K	45.614	0.030774	2128800.0	346.6	543.56	338.37	188.69	520.04	522.76	576.43	532.46	499.95	393.18	True	False	331.3638790071216	633.3740510597515	267.3507610996457	172.14784066012422	588.4343752242547	623.7759714943318	705.7091009037787	513.7330799987992	476.70743362334093	321.97129200790226	1.0291721256906	1.9671755426077129	0.8303558973608244	0.5346682916559503	1.827598887946235	1.9373651843438955	2.1918385844364603	1.5955866027527401	1.4805898707628906	1.0	8.330788248536328	-7.8045788906834375	24.99940027211622	1.7411869429121751	1.134401524466389	0.2751774425812721	0.45213041514588653	182.02922820686715	105485.09377811904	0.14474129150432063	0.16412224134932135	1.568270991439551e-08	7.8045788906834375	-0.6067854184457862	
PPAPNPT(ph)PPRNLDS(ph)RTFIT(ph)IGDR	ddPTM_K562_Methotrexat_30min_R1	1	PPAPNPTPPRNLDSRTFITIGDR	23	2	E9PRZ0;J3QR49;P46734-2;P46734;P46734-3	E9PRZ0	MAP2K3	Dual specificity mitogen-activated protein kinase kinase 3	3	PPAPNPT(1)PPRNLDS(0.928)RT(0.46)FIT(0.612)IGDR	47.795	0.020174	36298000.0	1404.4	1163.9	866.35	1576.9	1321.1	1126.0	1003.0	1252.7	1305.6	1492.6	True	False	1342.6642575810793	1356.2146920826497	684.5149743732543	1438.6556252951927	1494.8478061471494	1343.583563973177	1227.9482820229523	1208.6418309628805	1244.9029409713648	1222.2756764102828	1.0984954405084515	1.1095816747869303	0.5600332131157311	1.1770303975289755	1.22300380756769	1.0992475673893511	1.0046410197978655	0.9888455233867995	1.0185124068144238	1.0	10.25535399709809														
PPT(ph)VS(ph)ESQETPAGNSEGLPDK	ddPTM_K562_Methotrexat_30min_R1	1	PPTVSESQETPAGNSEGLPDK	21	0	Q8TDV0	Q8TDV0	GPR151	Probable G-protein coupled receptor 151	2	PPT(0.656)VS(0.73)ES(0.611)QET(0.002)PAGNSEGLPDK	65.753	0.017190999999999998	340130000.0	2279.9	2428.4	2696.9	2605.5	2888.7	3229.6	3454.9	3337.8	2789.3	3065.0	True	False	2179.6783258751775	2829.651824257673	2130.8575453191306	2377.0798602997183	3268.6146829288245	3853.674492191628	4229.749271745859	3220.40768211695	2659.6260518163517	2509.8987995427537	0.8684327536521652	1.1273967798116684	0.8489814592155366	0.9470819543532066	1.3022894323565124	1.5353903882075561	1.6852270189206127	1.2830826815422338	1.059654696954664	1.0	11.293413479777898	-7.796099779549308	5.07670172362234	1.3591096061258832	0.9520552275464172	0.42544392402879927	0.20277687366585442	0.1755436941831555	10.935784074841196	0.0655684781149078	0.07722086522439688	1.5991905709269634e-08	7.796099779549308	-0.4070543785794659	
PPTVS(ph)ES(ph)QETPAGNSEGLPDK	ddPTM_K562_Methotrexat_30min_R1	1	PPTVSESQETPAGNSEGLPDK	21	0	Q8TDV0	Q8TDV0	GPR151	Probable G-protein coupled receptor 151	2	PPT(0.423)VS(0.596)ES(0.979)QET(0.002)PAGNSEGLPDK	69.084	0.024669999999999997	198660000.0	4323.4	3568.1	4588.2	4573.4	4435.5	5587.1	4813.0	5338.2	4874.5	4640.7	True	False	4133.348512692989	4157.667877669988	3625.199521462878	4172.45712266157	5018.8459951295745	6666.728002020014	5892.437768072252	5150.452480279437	4647.885558949844	3800.2242606975733	1.0876591035536063	1.0940585587722136	0.9539435761608006	1.0979502356778463	1.3206710054022732	1.7542985741573742	1.5505500106961134	1.3553022471715956	1.2230555988547565	1.0	11.891868842757685	-7.801902712928537	3.8307793717550775	1.4206424645412867	1.048699291638172	0.37795037195137526	0.19076241940626118	0.2112430548360386	6.496453235254129	0.06141461547031297	0.07351679865540355	1.57796471276347e-08	7.801902712928537	-0.3719431729031146	
PQAQRNSANNTT(ph)T(ph)S(ph)GLTPNS(ph)MIPEKER	ddPTM_K562_Methotrexat_30min_R1	1	PQAQRNSANNTTTSGLTPNSMIPEKER	27	2	Q5T7W0-2;Q5T7W0-4;Q5T7W0	Q5T7W0-2	ZNF618	Zinc finger protein 618	4	PQAQRNS(0.087)ANNT(0.28)T(0.848)T(0.85)S(0.85)GLT(0.204)PNS(0.881)MIPEKER	48.388999999999996	0.020538999999999998	0.0	0.0	0.0	144.84	157.57	0.0	0.0	140.27	0.0	0.0	176.33	True	False	0.0	0.0	114.4400633557132	143.75608274320723	0.0	0.0	171.72911816486484	0.0	0.0	144.39492832736505	0.0	0.0	0.7925490505889539	0.9955757062137982	0.0	0.0	1.1893015921967083	0.0	0.0	1.0	7.1738762602168755	-12.538561589876286	2.91602165001135	1.029267906034063	0.35028545232555053	0.16298844904581333	0.4530059707916168	138620195.68281907	150680802.2831672	31980075.459397692	0.11922806869577818	2.8935994294689013e-13	12.538561589876286	-0.6789824537085125	
PQEYRR	ddPTM_K562_Methotrexat_30min_R1	1	PQEYRR	6	1	P07315	P07315	CRYGC	Gamma-crystallin C	0		47.045	0.032764999999999996	0.0	2235.4	1398.6	2768.4	2351.7	1659.0	1601.8	1339.2	1599.2	1900.3	2435.4	False	True	2137.1344925923845	1629.6948778647582	2187.350672424445	2145.530112249797	1877.1875788343964	1911.3251800819137	1639.5496902144932	1542.9552295648118	1811.9554677756469	1994.3254604914923	1.0716076863731647	0.817165959192602	1.096787217411035	1.0758174404096716	0.9412644104597512	0.958381777671773	0.822107385526951	0.7736727330275158	0.9085555510729422	1.0	10.961685151731242	-8.495048613971877	2.4269429435199896	0.8587035854607682	1.001051900869181	0.26597887556720456	0.09443777742930032	0.36663051444831196	4.314071234228859	0.039353888392599394	0.03128020702565517	3.1985370524285885e-09	8.495048613971877	0.14234831540841275	
PQKHESTSSY(ph)NYR	ddPTM_K562_Methotrexat_30min_R1	1	PQKHESTSSYNYR	13	1	A0A3B3IU13;A0A3B3IU05;A0A3B3ITQ1;A0A3B3ITU8;A0A3B3IU04;A0A3F2YNW8;Q14643-4;Q14643-3;Q14643-8;Q14643-7;Q14643-5;Q14643-6;Q14643-2;Q14643	A0A3B3IU13	ITPR1	Inositol 1,4,5-trisphosphate receptor type 1	1	PQKHEST(0.001)S(0.021)S(0.075)Y(0.451)NY(0.451)R	70.41199999999999	0.023639	0.0	1512.9	1431.3	1850.6	1592.3	1388.4	1294.0	1454.1	1695.3	1503.3	1487.4	True	False	1446.394727495311	1667.7979970597946	1462.1843499453385	1452.705531205236	1570.9989357767781	1544.047186306653	1780.2189400693655	1635.6753380948119	1433.4119111230484	1218.0174467993124	1.1874991867285027	1.3692726663664865	1.2004625662691812	1.1926803963462373	1.289800027007023	1.2676724708369953	1.4615709690755232	1.3428997609131252	1.1768402126666955	1.0	10.25031908312027	-10.041903995460881	4.3813054180394015	1.000216257428634	1.2898509445870199	0.5429918844118938	0.08196363438607801	0.17524056895242018	10.309560447661342	0.08322116609856745	0.021784709952431435	9.080212339151989e-11	10.041903995460881	0.2896346871583859	
PQPSSSAMRFQFQDVT(ph)GEFVACLLSLLRQMT(ph)DR	ddPTM_K562_Methotrexat_30min_R1	1	PQPSSSAMRFQFQDVTGEFVACLLSLLRQMTDR	33	2	F5GXW1;H0Y7H7;Q8N1I0-2;Q8N1I0;Q8N1I0-3	F5GXW1	DOCK4	Dedicator of cytokinesis protein 4	2	PQPS(0.037)S(0.038)S(0.039)AMRFQFQDVT(0.867)GEFVACLLS(0.096)LLRQMT(0.924)DR	40.163000000000004	0.014011000000000001	59650000.0	0.0	120.22	0.0	165.16	0.0	111.64	66.76100000000001	0.0	0.0	69.806	True	False	0.0	140.084311609396	0.0	150.68067922744243	0.0	133.21284998398355	81.73385369504912	0.0	0.0	57.16345696602989	0.0	2.450592022323683	0.0	2.6359616304693807	0.0	2.330384778218486	1.4298269914575057	0.0	0.0	1.0	5.8370212610926036	-9.2572241614175	24.74419017708838	0.24999997469047183	1.306047514095045	0.1521269091952514	0.9973977376997648	486.2075225522084	2854159.8348534848	0.4470604785216004	0.24621190348405153	5.530645708450523e-10	9.2572241614175	1.0560475394045732	
PRAS(ph)PPPQGPLPGPPGALHR	ddPTM_K562_Methotrexat_30min_R1	1	PRASPPPQGPLPGPPGALHR	20	1	A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74	A0A087WXV6	OTUD5	OTU domain-containing protein 5	1	PRAS(1)PPPQGPLPGPPGALHR	110.4	0.0001236	8952200.0	1625.1	1767.7	2461.1	2067.4	1609.4	1626.2	1487.7	1734.6	1686.3	1986.5	True	False	1553.6625498397966	2059.7823792374766	1944.5487429214709	1886.1542518455703	1821.064309449112	1940.4401347541564	1821.3545953794078	1673.5931348193596	1607.9042810661854	1626.7256004214294	0.9550858174465905	1.2662137847365633	1.195376000978717	1.1594790488063456	1.1194661896126403	1.1928503087745432	1.1196446376128566	1.0288109650366284	0.9884299359705362	1.0	10.667755199287853	-9.2611874069221	2.6181660325380443	0.9968010016086446	1.1551104183760565	0.4186293682271309	0.07551944022277576	0.2692243052425517	3.6014967420459	0.04669612088712193	0.020669252476282915	5.480404232737243e-10	9.2611874069221	0.15830941676741195	
PRS(ph)DALMS(ph)S(ph)Y(ph)GHTFFK	ddPTM_K562_Methotrexat_30min_R1	1	PRSDALMSSYGHTFFK	16	1	Q58EX7-2;Q58EX7	Q58EX7-2	PLEKHG4	Puratrophin-1	4	PRS(1)DALMS(0.999)S(0.998)Y(0.989)GHT(0.014)FFK	64.52	0.021465	5640800.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
PS(ph)EPVGTGNS(ph)APTQTS(ph)YQRRDTPTLR	ddPTM_K562_Methotrexat_30min_R1	1	PSEPVGTGNSAPTQTSYQRRDTPTLR	26	2	Q9UPZ9	Q9UPZ9	ICK	Serine/threonine-protein kinase ICK	3	PS(0.874)EPVGT(0.139)GNS(0.766)APT(0.11)QT(0.12)S(0.322)Y(0.303)QRRDT(0.322)PT(0.045)LR	42.041000000000004	0.023315	16792000.0	343.15	207.84	299.7	383.65	266.49	149.14	266.54	195.6	206.57	239.73	True	False	328.06553687620834	242.1820273240465	236.79706564282822	350.01600015505136	301.538106017829	177.95919425484863	326.3183799505461	188.72063713286462	196.96660578772574	196.3125739688041	1.671138685840577	1.233655198074737	1.2062246490663278	1.782952528607119	1.5360101491295521	0.9065094031273209	1.6622388131001795	0.9613273022585609	1.0033315839413608	1.0	7.617008771246523	-9.28272114446208	24.409521365950106	0.9867469558610807	1.4100592387117519	0.39716363631847706	0.24778949202330658	672.4761081924828	771303.482036169	0.13546748393584224	0.06518849781241288	5.215294717514148e-10	9.28272114446208	0.42331228285067113	
PS(ph)LYWWY(ph)LLELGFYLS(ph)LLIR	ddPTM_K562_Methotrexat_30min_R1	1	PSLYWWYLLELGFYLSLLIR	20	0	H0YN04;H0YKC9;Q9HA82	H0YN04	CERS4	Ceramide synthase 4	3	PS(0.577)LY(0.523)WWY(0.9)LLELGFY(0.47)LS(0.53)LLIR	46.663000000000004	0.030794	14303000.0	3449.5	2179.5	4490.9	3824.7	2439.5	2517.4	2453.0	3030.5	3247.2	4051.8	True	False	3297.8641103146774	2539.625329834293	3548.3214617797053	3489.394489229832	2760.337009383066	3003.851921799356	3003.147692724126	2923.915597296247	3096.2383807614997	3317.9797572552493	0.99393738105346	0.7654131476483634	1.069422275413459	1.0516623802781675	0.8319330470136788	0.9053255720535948	0.9051133257089056	0.8812337058123024	0.9331697621093439	1.0	11.696089369208861	-7.772238121550153	24.99795031675343	0.9030999646519904	0.9625815131095186	0.1001958909560744	0.08663406228217836	545.1754034853235	1262019.5655597625	0.027338936714507774	0.03130413992106313	1.689514325160139e-08	7.772238121550153	0.05948154845752818	
PS(ph)S(ph)S(ph)GYKMTTEDYK	ddPTM_K562_Methotrexat_30min_R1	2	PSSSGYKMTTEDYK	14	1	H7BZT5;O15231-4;O15231-7;O15231;O15231-3;O15231-8;O15231-6	H7BZT5	ZNF185	Zinc finger protein 185	3	PS(0.961)S(0.969)S(0.961)GY(0.109)KMTTEDYK;PS(0.82)S(0.866)S(0.821)GY(0.491)KMT(0.002)TEDYK	82.20200000000001	0.014653	397950000.0	9559.1	9565.3	9705.8	10067.3	10124.9	10219.7	10090.5	11323.6	10834.1	10007.900000000001	True	False	9138.893409743157	11145.803242699683	7668.685217604814	9184.715439491594	11456.501818529465	12194.512387865603	12353.55148529671	10925.34256972242	10330.425055742842	8195.372331466207	1.1151285188903854	1.3600118203178237	0.9357335954293164	1.1207197266958566	1.3979232858697732	1.4879753957052886	1.5073813593392378	1.3331111910284377	1.2605193074729601	1.0	13.00059377987548	-7.758532565503739	24.994158135958504	1.364459991404242	1.135037561708158	0.24347937042158962	0.165032343497126	95.2631496666429	819110.632843486	0.049185178397147276	0.06072760979413628	1.743682602796585e-08	7.758532565503739	-0.22942242969608384	
PS(ph)S(ph)S(ph)NMKR	ddPTM_K562_Methotrexat_30min_R1	1	PSSSNMKR	8	1	Q9NSK0-3;Q9NSK0-5;Q9NSK0	Q9NSK0-3	KLC4	Kinesin light chain 4	3	PS(1)S(1)S(1)NMKR	76.221	0.021858000000000002	242420000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
PSGGFVISGVLS(ph)PDTISSK	ddPTM_K562_Methotrexat_30min_R1	2	PSGGFVISGVLSPDTISSK	19	0	H0Y8J2;Q03188;H0Y9W1	H0Y8J2	CENPC	Centromere protein C	1	PSGGFVIS(0.001)GVLS(0.988)PDT(0.009)IS(0.001)S(0.001)K;PSGGFVIS(0.001)GVLS(0.998)PDT(0.001)ISSK	96.15299999999999	0.00092583	7926700.0	2518.3999999999996	1380.29	2973.6000000000004	2227.7	1395.4699999999998	1503.29	1271.1599999999999	2076.3199999999997	2150.1800000000003	3183.0	True	False	2407.694151447014	1608.3594615815443	2349.4819966483615	2032.4009997273754	1578.998764699237	1793.7795167719685	1556.24998821166	2003.2946487306212	2050.2186011165822	2606.527856099378	0.9237170229402747	0.6170505555188753	0.9013838049535826	0.779735000710419	0.6057862612150173	0.688187357205661	0.5970586443455701	0.7685682867508332	0.7865707616816716	1.0	11.347913562835677	-10.231612148211916	2.002632558245227	0.9995731145458928	0.727617432772553	0.3461598135224947	0.10879304661600307	1.0238482867686585	6.727701442492629	0.10410084514066123	0.02888763738034312	5.866618558959171e-11	10.231612148211916	-0.27195568177333984	
PT(ph)ET(ph)LERSLEMNKHK	ddPTM_K562_Methotrexat_30min_R1	1	PTETLERSLEMNKHK	15	2	Q2KHT3;Q2KHT3-2	Q2KHT3	CLEC16A	Protein CLEC16A	2	PT(1)ET(1)LERSLEMNKHK	90.861	0.0037908	4370600.0	1566.9	1396.4	1765.9	1500.1	1599.8	1557.4	1635.2	1885.0	1654.4	1730.8	True	False	1498.0209521530846	1627.1313652583651	1395.2617224513533	1368.588562055501	1810.2017411809916	1858.3455084652085	2001.9352250886654	1818.7034815718298	1577.4873051034203	1417.3353482050904	1.056927673503786	1.1480214384824028	0.9844259682215002	0.9656067378751808	1.2771866188714096	1.3111544214420476	1.4124640492625198	1.2831850160761396	1.1129951052876412	1.0	10.468965431734285	-7.771252863183069	24.996750928408837	1.2598879915786423	1.0426709170975959	0.3863796929752079	0.11683422727277351	189.1804487292856	481875.9913693061	0.03638479912583143	0.041754827590737245	1.693351578044111e-08	7.771252863183069	-0.21721707448104643	
PT(ph)EYVT(ph)ARMPVDPPGKPEVIDVT(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	PTEYVTARMPVDPPGKPEVIDVTK	24	2	A0A0A0MRA3;A0A0A0MTS7;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42;Q8WZ42-8;Q8WZ42-13;Q8WZ42-12	A0A0A0MRA3	TTN	Titin	3	PT(0.578)EY(0.524)VT(0.898)ARMPVDPPGKPEVIDVT(1)K	45.885	0.027458	0.0	2013.1	1546.3	2648.4	2069.2	1420.2	1318.8	1340.1	2001.8	2060.3	2271.7	True	False	1924.606534417879	1801.799792394021	2092.537032527416	1887.7964486402516	1606.9811931649238	1573.639435317784	1640.6515381245827	1931.3955593689595	1964.517102698609	1860.2731167769243	1.0345827809157493	0.9685673443025328	1.1248547396916149	1.014795317749371	0.8638415395418659	0.8459184950456325	0.8819412178396395	1.0382322584520602	1.0560369254286144	1.0	10.86129873142218	-7.542163988708661	23.287232884294678	0.9410290298384796	1.04101933715213	0.24924154201413495	0.07547664955908533	156.72959098817543	189251.25227796365	0.02454784420593468	0.031698463214521036	2.8696967857773456e-08	7.542163988708661	0.09999030731365033	
PT(ph)MQASR	ddPTM_K562_Methotrexat_30min_R1	1	PTMQASR	7	0	Q13636	Q13636	RAB31	Ras-related protein Rab-31	1	PT(0.986)MQAS(0.014)R	48.761	0.031072000000000002	98775000.0	232.0	258.62	322.94	340.14	286.96	326.13	293.36	333.49	326.12	306.16	True	False	221.80155778895625	301.3525592116288	255.1593072362195	310.32045430141864	324.7002698145377	389.15000685485967	359.15344767123946	321.7609676760686	310.95875238172613	250.7114572489429	0.8846885588029562	1.201989580047002	1.0177409123463397	1.2377593657129407	1.2951154022934337	1.5521827806555117	1.4325370352525195	1.2833915577961696	1.2403053127044008	1.0	7.969884117093526	-7.442140390314275	2.4462440927713023	1.3340085143180185	1.0470473470047845	0.36359695973616846	0.15296778310119272	0.3010339043614798	3.5389112321944767	0.04665461849157426	0.07412792952071486	3.6129305193552984e-08	7.442140390314275	-0.28696116731323396	
PT(ph)RENHHPSPY(ph)SLFLK	ddPTM_K562_Methotrexat_30min_R1	1	PTRENHHPSPYSLFLK	16	1	H0YGY9	H0YGY9	TRPT1		2	PT(0.527)RENHHPS(0.473)PY(0.808)S(0.192)LFLK	62.556000000000004	0.030289999999999997	0.0	913.44	676.41	1080.9	843.8	707.34	740.79	827.51	947.99	834.98	806.42	True	False	873.2862713221731	788.1752554958542	854.0338613724824	769.8253640840154	800.3676082053779	883.9371832643783	1013.100182309883	914.6486543741532	796.161962049839	660.3695236304305	1.3224206146298467	1.1935366901288875	1.2932666193881386	1.1657493820305989	1.2119996147085914	1.338549329782616	1.5341413345974682	1.3850558235119699	1.2056309892571653	1.0	9.36712973049561	-8.267399929683197	23.096402554293796	1.3318331127005771	1.2340817453061912	0.0	0.137096322108241	410.52759970156916	1590735.2453004024	0.04662432672334098	0.04230227377181165	5.402565865730963e-09	8.267399929683197	-0.09775136739438595	
PT(ph)T(ph)AVT(ph)PQAT(ph)SGLPPTATLR	ddPTM_K562_Methotrexat_30min_R1	1	PTTAVTPQATSGLPPTATLR	20	0	A0A0G2JN42;A0A0G2JNJ8;Q6W4X9	A0A0G2JN42	MUC6	Mucin-6	4	PT(0.999)T(0.998)AVT(0.831)PQAT(0.504)S(0.474)GLPPT(0.099)AT(0.095)LR	46.702	0.028857	0.0	0.0	147.57	147.25	0.0	178.42	0.0	61.33	179.54	72.516	272.17	True	False	0.0	171.95343423888355	116.34423729031188	0.0	201.88535733311198	0.0	75.08481369538148	173.22547643575922	69.14474698795915	222.87737561877717	0.0	0.7715158784577714	0.5220100827520243	0.0	0.905813597152314	0.0	0.3368884503728681	0.7772232419501137	0.31023672454860773	1.0	7.800106365191628	-11.549902657775814	0.5075094389679558	1.1105939020760462	0.3921756528254709	0.2371005194023178	0.3226058393244514	14.946791712458388	3.2289975666127297	3.186240636334863	0.15038897219099134	2.819014710904399e-12	11.549902657775814	-0.7184182492505753	
PT(ph)VPS(ph)SQRLPEPRAS(ph)S(ph)S(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	PTVPSSQRLPEPRASSSK	18	2	H0Y517;H7C1U3;Q5T0F9-3;Q5T0F9-2;Q5T0F9	H0Y517	CC2D1B	Coiled-coil and C2 domain-containing protein 1B	5	PT(0.92)VPS(0.54)S(0.54)QRLPEPRAS(1)S(1)S(1)K	58.802	0.021855	18469000.0	974.47	1151.2	1315.3	1455.4	1089.9	1028.2	983.05	1057.2	1328.9	1082.3	True	False	931.6334655974322	1341.4162329457397	1039.236504638011	1327.8073416542734	1233.240953689939	1226.8850981147602	1203.523986682615	1020.0176767733353	1267.1197290570212	886.2849822985725	1.0511669318611818	1.5135269803024172	1.1725760059058656	1.498171996788907	1.3914722446176842	1.3843008993933805	1.3579424346797415	1.1508913014952913	1.4296978447843685	1.0	9.791626857450023	-12.93461663491147	0.534240512772543	0.6894396326513981	1.3367362439591695	0.30625959345995535	0.1468037403214245	100.95978876124452	8.986983599742494	39.04029479955453	0.061799530421491194	1.1624743128738455e-13	12.93461663491147	0.6472966113077714	
PTT(ph)APPRT(ph)TT(ph)RRPPR	ddPTM_K562_Methotrexat_30min_R1	1	PTTAPPRTTTRRPPR	15	3	D6RIE1;E9PB58;Q6UXF1-2;Q6UXF1	D6RIE1	TMEM108	Transmembrane protein 108	3	PTT(0.978)APPRT(0.831)T(0.405)T(0.785)RRPPR	71.531	0.015519	0.0	203.63	201.92	390.57	287.45	152.54	245.13	244.89	174.08	221.53	163.23	True	False	194.67866901967741	235.28384794684118	308.594694454853	262.2497047949159	172.60168371030662	292.49790322979135	299.81281633559405	167.9575077305167	211.23111865302266	133.66746526896048	1.4564401937895102	1.7602177723158896	2.308674693830026	1.9619561444307125	1.2912767019484077	2.1882505413059072	2.2429752500529756	1.2565324508290714	1.5802732417196033	1.0	7.062504545206037	-9.741560979570924	1.5344359667405294	1.0872748860023358	1.8781805442435762	0.3581646554610083	0.3494963064141028	0.41386085448780474	1.9167861961997705	0.3344525710211385	0.10232118282450305	1.8131720693258822e-10	9.741560979570924	0.7909056582412404	
PTT(ph)VNVPTTEVS(ph)PT(ph)SQKT	ddPTM_K562_Methotrexat_30min_R1	1	PTTVNVPTTEVSPTSQKT	18	1	H3BLV0	H3BLV0	CD55		3	PT(0.198)T(0.716)VNVPT(0.076)T(0.049)EVS(0.889)PT(0.516)S(0.469)QKT(0.087)	55.846000000000004	0.02657	0.0	261.81	61.915	223.42	436.87	147.04	185.68	235.03	302.03	271.44	270.63	True	False	250.30114588244243	72.1454013749439	176.5271952149506	398.57028538443177	166.37833730669652	221.56003211237964	287.7414603428258	291.40743370776613	258.82081364680397	221.61628454168215	1.1294348084577024	0.3255419678393472	0.7965443314782625	1.7984702081288961	0.7507496015050449	0.99974617195023	1.298376881184048	1.3149188666817373	1.167878137574878	1.0	7.791920085441346	-7.022176815508218	24.857250712775528	1.1903548551611955	0.685876983311053	0.29053477951744755	0.3146265602412849	752.8786350512739	843877.3880088136	0.082306590444645	0.14416249063650668	9.502178500832591e-08	7.022176815508218	-0.5044778718501426	
PVEMMTGPQLIT(ph)IR	ddPTM_K562_Methotrexat_30min_R1	1	PVEMMTGPQLITIR	14	0	A6NNT2	A6NNT2	C16orf96	Uncharacterized protein C16orf96	1	PVEMMTGPQLIT(1)IR	51.726000000000006	0.033353	11632000.0	160.11	0.0	0.0	0.0	0.0	0.0	62.702	64.7	134.25	58.03	True	False	153.07175611030084	0.0	0.0	0.0	0.0	0.0	76.76451962054149	62.42446432769089	128.00874680254725	47.52020467780296	3.221193114553267	0.0	0.0	0.0	0.0	0.0	1.6154080173059264	1.3136404767391463	2.6937751567038406	1.0	5.570469144978385	-8.779025729513226	21.334677902454317	1.6818472847947286	0.43925419247921976	0.22176505685745918	1.0165043098183193	64.007580271299	77646.16981669918	0.4235462017628446	0.2868270587412509	1.6633141054155328e-09	8.779025729513226	-1.2425930923155089	
PVLQQINTVDVLT(ph)T(ph)MGAIPAGFR	ddPTM_K562_Methotrexat_30min_R1	1	PVLQQINTVDVLTTMGAIPAGFR	23	0	O15259-4	O15259-4			2	PVLQQINTVDVLT(1)T(1)MGAIPAGFR	49.528	0.030385000000000002	21425000.0	217.7	202.85	302.99	294.34	256.87	240.68	241.37	208.43	233.3	282.24	True	False	208.13016866661977	236.367514639544	239.39653960333837	268.53566919233106	290.6529073991508	287.18800370964874	295.5033667316849	201.09939876075143	222.453933922043	231.12360103848198	0.9005145633394929	1.0226887846048613	1.0357944343532401	1.1618703930959435	1.2575648098817793	1.2425732483366425	1.2785512401326928	0.8700946067695979	0.9624890444875187	1.0	7.852520776982551	-9.276691156556828	24.90056671398449	0.9372188620818425	1.1315063159656564	0.34639545155548146	0.11585152100498988	984.4694688967214	1607268.5722748868	0.0706986206484481	0.03417198596108249	5.288211830913036e-10	9.276691156556828	0.19428745388381397	
PY(ph)DCKECGKAFTQS(ph)SQLR	ddPTM_K562_Methotrexat_30min_R1	1	PYDCKECGKAFTQSSQLR	18	2	Q8NA42	Q8NA42	ZNF383	Zinc finger protein 383	2	PY(1)DCKECGKAFT(0.029)QS(0.486)S(0.486)QLR	51.495	0.032503	0.0	2301.8	2345.2	2456.2	2494.2	2100.7	2563.9	2137.0	2840.4	2821.2	2583.0	True	False	2200.6156280974983	2732.704438415868	1940.6771859590078	2275.5373584953195	2376.978870920685	3059.3373886952304	2616.276648736837	2740.501522045954	2690.043027779115	2115.1936702182493	1.040384934524901	1.291940533338445	0.9174938509336431	1.0758056770567612	1.1237641755402115	1.4463627760287137	1.2368969733475448	1.2956267601553404	1.271771500479931	1.0	11.046574049317755	-8.025513891911677	23.289163216107777	1.2697014235735418	1.0866174006146037	0.26251361964873954	0.13368445300963713	385.67795393616575	352047.1872179653	0.04208866130771568	0.04229485547931924	9.42944448722283e-09	8.025513891911677	-0.1830840229589381	
PY(ph)ECIQCGKAFS(ph)ER	ddPTM_K562_Methotrexat_30min_R1	1	PYECIQCGKAFSER	14	1	A0A1W2PPT3;P52740-2;P52740	A0A1W2PPT3	ZNF132	Zinc finger protein 132	2	PY(1)ECIQCGKAFS(1)ER	85.536	0.012454	0.0	5322.0	4822.8	5648.3	5150.5	5025.9	4917.1	4716.8	5970.5	5767.5	5724.4	True	False	5088.051252382867	5619.685726416533	4462.79901858654	4698.963661667127	5686.893943618919	5867.2599843805565	5774.662469238141	5760.514130888388	5499.370183863621	4687.655689429869	1.085414883148488	1.1988264707854472	0.9520321700780295	1.00241228728952	1.2131637475939665	1.2516405583308008	1.2318870778541497	1.2288688659189906	1.173160007520193	1.0	12.194650891667486	-7.773653920516493	24.99581241595228	1.200427888682454	1.061922576558749	0.3017972874633007	0.08967181421393777	249.75119978060795	511088.3801000912	0.0277895532458049	0.031735146184588094	1.684015480504252e-08	7.773653920516493	-0.13850531212370498	
PY(ph)ETITPK	ddPTM_K562_Methotrexat_30min_R1	1	PYETITPK	8	0	Q5VUA4	Q5VUA4	ZNF318	Zinc finger protein 318	1	PY(0.992)ET(0.008)ITPK	86.794	0.024768000000000002	11844000.0	3683.7	3731.7	3178.2	3662.5	4076.7	4169.4	4082.4	4792.4	4404.1	4475.0	True	False	3521.7689587378363	4348.29999694546	2511.139252672794	3341.414311398085	4612.857506108607	4975.077541411868	4997.982120169986	4623.848575641821	4199.354352276339	3664.534136363404	0.9610413841669806	1.1865901189995762	0.6852547033890612	0.9118251289409531	1.2587841549448073	1.3576289253370186	1.3638792638263875	1.2617834637584842	1.1459449403420425	1.0	11.839414088238737	-7.763920826973846	24.9958684019057	1.257367736713241	0.9361413117500572	0.4746137610183585	0.1506491650292217	54.20990178589969	546062.3070694617	0.046642130192947266	0.05538553714781825	1.7221825047696237e-08	7.763920826973846	-0.32122642496318377	
PYECT(ph)ECGKK	ddPTM_K562_Methotrexat_30min_R1	1	PYECTECGKK	10	1	P17014-3;P17014-2;P17014-4;P17014-5;P17014	P17014-3	ZNF12	Zinc finger protein 12	1	PY(0.027)ECT(0.973)ECGKK	74.611	0.021779	0.0	2841.9	2457.2	2278.8	3236.0	2818.3	2588.5	2693.6	3510.4	3499.9	3433.4	True	False	2716.973478794979	2863.2105347413726	1800.5110216445692	2952.304904214118	3188.9558489626133	3088.6909905369157	3297.7083673549578	3386.937242286337	3337.190412917954	2811.5779896737663	0.9663518098284144	1.0183642585257247	0.6403916335443665	1.0500526448340424	1.1342227961219156	1.0985613779453807	1.1729030386020336	1.2046392647565616	1.1869457027955947	1.0	11.45716435066051	-7.509616911775031	20.92446369890782	1.138736443432544	0.8820108458944481	0.5403796870879897	0.10620846276273697	54.24623345090635	85588.97015399531	0.03046205679080545	0.04286304837723487	3.093022563827423e-08	7.509616911775031	-0.2567255975380959	
PYMET(ph)AKT(ph)GDNRK	ddPTM_K562_Methotrexat_30min_R1	1	PYMETAKTGDNRK	13	2	Q9Y615	Q9Y615	ACTL7A	Actin-like protein 7A	2	PY(0.005)MET(0.995)AKT(1)GDNRK	62.162	0.024664	4841100.0	680.25	710.11	1789.9	1075.3	738.57	804.05	499.64	572.1	470.23	909.55	True	False	650.3470245083514	827.4436076937964	1414.2244504307591	981.0301185109525	835.7049006026037	959.4212829597095	611.6969886639553	551.9789187306329	448.369109936401	744.8216812802975	0.873158020038366	1.1109284658194662	1.8987423244712802	1.3171342123454688	1.1220201044175893	1.2881221197945392	0.8212663568177687	0.7410886828399234	0.6019818182060506	1.0	9.540751259207815	-8.791109792371406	4.4647220922879365	0.7590246208698747	1.2879857846604068	0.44083073808162143	0.26247183079055425	0.19516357732832976	8.885956268049348	0.11828730928270469	0.08140761631915161	1.6176710285538998e-09	8.791109792371406	0.5289611637905322	
QAAPPIELDAVWEDIRER	ddPTM_K562_Methotrexat_30min_R1	2	QAAPPIELDAVWEDIRER	18	1	O75400-3;O75400;O75400-2	O75400-3	PRPF40A	Pre-mRNA-processing factor 40 homolog A	0	;	202.35	7.7471e-20	10626400.0	2925.7	2932.1000000000004	3042.1	3368.8	2867.2	3031.2	3190.0	3419.7	3126.5	3610.9	False	True	2797.0897311342637	3416.579687821579	2403.604782756249	3073.4625343994203	3244.2870560783485	3616.936500102569	3905.4387035425857	3299.427212695586	2981.1496974164925	2956.9310196635997	0.9459435179696818	1.155447883329477	0.8128714423069967	1.039409615564545	1.0971805004931905	1.223206248657791	1.320774369632368	1.1158282661159107	1.0081904777594872	1.0	11.52988487281088	-7.773135596504337	3.1010581230759096	1.1519598346242066	0.9830880573128372	0.24957002160085884	0.11865926317768391	0.3312808856685501	6.579117183023473	0.03877491434134288	0.047935068095142856	1.6860265278008682e-08	7.773135596504337	-0.16887177731136938	
QACTAQT(ph)PEPLRR	ddPTM_K562_Methotrexat_30min_R1	1	QACTAQTPEPLRR	13	1	F2Z2E2;Q86VI3	F2Z2E2	IQGAP3	Ras GTPase-activating-like protein IQGAP3	1	QACTAQT(1)PEPLRR	99.711	0.0056435	13523000.0	1096.9	938.12	1643.7	1332.3	1031.8	1082.4	1169.7	1116.9	1423.5	1616.9	True	False	1048.681589390975	1093.1283846864628	1298.7098324895464	1215.499327529194	1167.4997853172576	1291.558481034251	1432.035000480804	1077.6179939350538	1357.3217957052225	1324.0637419186567	0.7920174506639427	0.8255859216433545	0.9808514434566642	0.9180066556069684	0.8817549702142531	0.9754503806309933	1.0815453630696734	0.8138716889668117	1.0251181666966975	1.0	10.370756861441942	-4.9208928354479795	0.5764554368697462	0.9660751389064682	9.091803132610002e-11	0.3856127828677277	0.0733038546754128	16.634527652993707	1.2687697669086553	0.03487566038884314	15.107122702624	1.1997953227203795e-05	4.9208928354479795	-0.9660751388155502	
QADFEAHNILR	ddPTM_K562_Methotrexat_30min_R1	2	QADFEAHNILR	11	0	P49915-2;P49915	P49915-2	GMPS	GMP synthase [glutamine-hydrolyzing]	0	;	171.67	1.9685e-05	15047200.0	11103.0	10273.5	11756.099999999999	10867.900000000001	10215.7	9735.3	9612.400000000001	11982.0	12153.4	13643.2	False	True	10614.925414356814	11971.021255357928	9288.655266612117	9915.128080503277	11559.24361006543	11616.508943470757	11768.225389947573	11560.586268537741	11588.391086704487	11172.284274688971	0.9501123631811925	1.0714927190385328	0.8314016219275541	0.8874754559339484	1.03463565067469	1.0397613109244084	1.0533410268308978	1.0347558282891598	1.0372445600008777	1.0	13.44763656759487	-7.782112282351439	24.371386349983506	1.036353715959612	0.937452931180029	0.40761875791475377	0.05787886398318234	190.54346105219204	224631.18359354234	0.018957859471546816	0.021522428909392294	1.651534755779198e-08	7.782112282351439	-0.09890078477958286	
QADLYISEGLHPR	ddPTM_K562_Methotrexat_30min_R1	2	QADLYISEGLHPR	13	0	P40227;Q92526-3;Q92526	P40227	CCT6A;CCT6B	T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2	0	;	159.58	1.498e-07	20529100.0	6398.299999999999	5471.7	7154.5	7209.9	5481.6	5600.4	5763.8	6749.700000000001	7341.1	7535.9	False	True	6117.038393108096	6375.805422002434	5652.868222027413	6577.819261091891	6202.526481096214	6682.598038788078	7056.478871309956	6512.309225233624	6999.813863330947	6171.075485635969	0.9912434886506166	1.0331757303638567	0.9160264260557572	1.0659113271912934	1.0050965177031868	1.0828903412934663	1.1434763499060878	1.0552956677311633	1.1342939945596162	1.0	12.591306226643045	-8.035496848683758	1.6092458172099042	1.0907591070008713	0.9928801196630073	0.36904764629757414	0.05201464049547089	0.3726938727262868	1.9543445790260765	0.01979955088763746	0.02137456026770363	9.2151657539513e-09	8.035496848683758	-0.09787898733786404	
QAEQLS(ph)AAGEGGDAGR	ddPTM_K562_Methotrexat_30min_R1	1	QAEQLSAAGEGGDAGR	16	0	F8WBJ6;Q9NRX1	F8WBJ6	PNO1	RNA-binding protein PNO1	1	QAEQLS(1)AAGEGGDAGR	130.38	8.6381e-05	8201400.0	850.83	667.28	924.48	1009.6	824.7	676.23	740.29	872.33	965.03	1111.0	True	False	813.4285319550764	777.53667817932	730.4442817667066	921.0899355051212	933.1625052831378	806.9018769676567	906.3188770675682	841.6496594586487	920.1659659356587	909.787134189886	0.8940866510267684	0.8546358251940686	0.802873830939724	1.012423566887764	1.0256932311029725	0.8869128245984234	0.9961878367015972	0.925106135083005	1.0114079781475636	1.0	9.829385222588847	-7.264504065755891	24.99995596623537	0.9752956157284581	0.8509424729954834	0.6266624401814105	0.04559107562696405	174.63890539298222	1424606.9426894453	0.012708813898905491	0.01978469996501142	5.4387104011245986e-08	7.264504065755891	-0.12435314273297471	
QAESLS(ph)LTR	ddPTM_K562_Methotrexat_30min_R1	2	QAESLSLTR	9	0	A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154-4;Q15154-2;Q15154;E5RGQ4;E9PGW9;E7EV93;Q15154-3	A0A5H1ZRS1	PCM1	Pericentriolar material 1 protein	1	QAES(0.014)LS(0.986)LTR;QAES(0.169)LS(0.794)LT(0.037)R	88.338	0.015083000000000001	42633000.0	4961.200000000001	4646.6	4152.8	4512.0	4912.0	4308.2	4474.6	4936.5	5790.6	5421.7	True	False	4743.111588373149	5414.371671304442	3281.1840313698262	4116.439965331923	5558.014097187792	5140.698677006429	5478.142953878265	4762.880496965165	5521.396269905622	4439.777592652838	1.0683218898672497	1.2195141667151097	0.739042432395643	0.9271725620094146	1.251867685080772	1.157873017223545	1.2338777876945377	1.0727745697998505	1.2436200135436286	1.0	12.116271692315522	-7.756657868573852	24.996598430608746	1.1672282325296284	0.9871935435752897	0.28057842830331414	0.13422079921932953	161.17451460539343	842575.7691853904	0.04120386345861296	0.05146401001736415	1.7512257377379248e-08	7.756657868573852	-0.18003468895433872	
QAFLDQNADRAS(ph)RR	ddPTM_K562_Methotrexat_30min_R1	1	QAFLDQNADRASRR	14	2	Q9NZJ4-2;Q9NZJ4	Q9NZJ4-2	SACS	Sacsin	1	QAFLDQNADRAS(1)RR	67.415	0.033469	22692000.0	0.0	0.0	0.0	0.0	0.0	0.0	50.486999999999995	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	61.809994929703635	0.0	0.0	0.0											0.0														
QAGIGGEPAAAGAGCS(ph)PRPK	ddPTM_K562_Methotrexat_30min_R1	2	QAGIGGEPAAAGAGCSPRPK	20	1	J3QQY0;J3KSZ8;Q68DK7	J3QQY0	MSL1	Male-specific lethal 1 homolog	1	QAGIGGEPAAAGAGCS(1)PRPK;QAGIGGEPAAAGAGCS(1)PRPK	118.52	3.9668e-05	73395000.0	7827.299999999999	6734.799999999999	12334.599999999999	9301.5	6802.4	5932.3	5589.2	7988.8	8303.2	10434.7	True	False	7483.221264144381	7847.611227973383	9745.736022282383	8486.051936510388	7697.03483198499	7078.633016481419	6842.720376752426	7707.829375905051	7917.186044327076	8544.874715689652	0.8757555275098513	0.9183997997728405	1.1405358588099335	0.9931160161925773	0.9007779620047673	0.8284068815525175	0.8007982099711984	0.9020412390309642	0.9265420860752883	1.0	13.060843624032398	-7.824457020892237	4.848314470910144	0.8786699782188679	0.9888468663880365	0.21046514277531003	0.0818868896847378	0.2860498170300874	13.205236849878487	0.02700746436800769	0.031392003158531155	1.4981075030011093e-08	7.824457020892237	0.1101768881691686	
QAGQHS(ph)Y(ph)YSAMKPIRNMDK	ddPTM_K562_Methotrexat_30min_R1	1	QAGQHSYYSAMKPIRNMDK	19	2	G5E9Y6;Q8NEY3	G5E9Y6	SPATA4	Spermatogenesis-associated protein 4	2	QAGQHS(0.864)Y(0.853)Y(0.22)S(0.062)AMKPIRNMDK	48.547	0.029019999999999997	0.0	130.24	0.0	104.4	0.0	0.0	0.0	100.08	164.38	67.054	143.79	True	False	124.51480554497269	0.0	82.48786671041466	0.0	0.0	0.0	122.52548760205087	158.5986622285291	63.93667417577658	117.74823764641201	1.0574664048805564	0.0	0.7005443848605084	0.0	0.0	0.0	1.0405717321220938	1.346930242003175	0.5429947441572162	1.0	6.87956165676515	-8.773270113161642	24.985825416851192	1.011535285630468	0.27157167797885073	0.44261875481899426	0.37810703771078313	198.2164327965307	418617.5948431752	0.15466269836121396	0.10520935133776652	1.6855043854714985e-09	8.773270113161642	-0.7399636076516173	
QALDS(ph)EEEEEDVAAKETLLR	ddPTM_K562_Methotrexat_30min_R1	3	QALDSEEEEEDVAAKETLLR	20	1	H7C3D5;Q8NC44	H7C3D5	FAM134A	Protein FAM134A	1	QALDS(0.988)EEEEEDVAAKET(0.012)LLR;QALDS(1)EEEEEDVAAKETLLR;QALDS(1)EEEEEDVAAKETLLR	130.95	1.1540999999999999e-07	49465000.0	5334.7	3849.7	7204.9	6104.3	4041.6	3311.7999999999997	3209.3100000000004	4234.0	4571.1	6555.4	True	False	5100.192975589422	4485.797491288404	5692.689950784163	5569.145496537154	4573.141240878295	3951.7584788333643	3929.0794625913068	4085.0878201459523	4358.59055872718	5368.15353687523	0.9500832903818569	0.8356313694223357	1.0604558740132166	1.0374415445238774	0.8519020943540846	0.7361485567966186	0.7319238236390683	0.7609856521584994	0.811934779582383	1.0	12.390210219933557	-7.951568757110757	5.6708598853932966	0.7888149169575985	0.9666713030222183	0.4084879175054499	0.0912553070566051	0.17656859918117576	12.9577503063427	0.028727579017954	0.03241683507642957	1.1179728141247018e-08	7.951568757110757	0.17785638606461973	
QALPCVAES(ph)PTVHVEVHQR	ddPTM_K562_Methotrexat_30min_R1	1	QALPCVAESPTVHVEVHQR	19	0	Q15645-2;Q15645	Q15645-2	TRIP13	Pachytene checkpoint protein 2 homolog	1	QALPCVAES(0.964)PT(0.036)VHVEVHQR	105.16	0.00033578	12269000.0	2228.9	2236.5	2385.0	2783.1	2461.7	2189.2	1654.3	2299.6	2642.5	2330.1	True	False	2130.9202248095025	2606.043610999953	1884.421092953439	2539.109944041506	2785.4566985030933	2612.2319167407454	2025.318886291693	2218.721764574311	2519.6507517745345	1908.096310869356	1.116778127325567	1.3657820080437146	0.9875922311777174	1.3307032404903352	1.4598092783031478	1.3690251911605946	1.0614343074584787	1.1627933830884194	1.3205050171846646	1.0	10.897918277654817	-12.228397921006756	4.432540389136237	0.999907666331306	1.2429531762497201	0.19837329332158193	0.14567980404948194	0.0001366481480353922	2.378721433296503e-05	0.14500045308452691	0.03515444711994558	5.910198658503521e-13	12.228397921006756	0.24304550991841412	
QAPFRS(ph)PTAPSVFSPTGNR	ddPTM_K562_Methotrexat_30min_R1	1	QAPFRSPTAPSVFSPTGNR	19	1	H0Y3X6;A0A0C4DFX9;Q9H3P2;C9JEM7;H7C2C7;C9JHL4	H0Y3X6	NELFA	Negative elongation factor A	1	QAPFRS(0.982)PT(0.018)APSVFSPTGNR	101.05	0.00046766	28367000.0	622.82	428.85	706.31	642.53	528.48	518.21	530.02	457.36	584.62	628.03	True	False	595.4415785436113	499.71017329636896	558.0651832972509	586.2003924921805	597.9843831599766	618.3467483894669	648.8904770067849	441.27438956588423	557.4411438041353	514.2876812648731	1.1577986411790828	0.9716549540275761	1.085122595051681	1.1398297370266397	1.1627429645782188	1.2023363010925405	1.2617266573658945	0.8580302535743902	1.0839091895670683	1.0	9.0064317869982	-9.262928938496106	24.99989407571899	0.9782272996573163	1.134820079243391	0.4081501814078212	0.08785173936296725	146.87828732614867	2465064.7975361524	0.04726004652932756	0.024587197376639273	5.458471681146073e-10	9.262928938496106	0.15659277958607465	
QAPGVGAVGGGS(ph)PEREEVGAGYNS(ph)EDEYEAAAAR	ddPTM_K562_Methotrexat_30min_R1	3	QAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAAR	34	1	A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3	A0A087WXV6	OTUD5	OTU domain-containing protein 5	2	QAPGVGAVGGGS(0.995)PEREEVGAGY(0.218)NS(0.712)EDEY(0.075)EAAAAR;QAPGVGAVGGGS(0.993)PEREEVGAGY(0.265)NS(0.723)EDEY(0.019)EAAAAR;QAPGVGAVGGGS(0.999)PEREEVGAGY(0.106)NS(0.881)EDEY(0.015)EAAAAR	89.164	5.185100000000001e-07	241018000.0	2612.5800000000004	2228.8	3271.03	2640.68	2325.42	2579.98	2512.92	3037.9900000000002	3190.34	3118.5699999999997	True	False	2497.734111414965	2597.0713168775724	2584.4855042698046	2409.1756843201915	2631.253489796913	3078.524621118575	3076.5062780270355	2931.1421697508754	3042.021789750754	2553.7667534388406	0.9780588254787077	1.0169571333718785	1.012028800511871	0.9433812547978604	1.0303421353002309	1.2054838669087957	1.2046935272707604	1.1477720766016983	1.1911901451667193	1.0	11.3184110481429	-8.133889350691698	4.764036272035035	1.161857838042438	0.9910911665425828	0.6305101363943539	0.059020596399043626	0.13515221820945345	4.6619953388461415	0.018766088254672835	0.018846509786143373	7.347010310364948e-09	8.133889350691698	-0.17076667149985525	
QAPGVGAVGGGSPEREEVGAGYNS(ph)EDEYEAAAAR	ddPTM_K562_Methotrexat_30min_R1	2	QAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAAR	34	1	A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3	A0A087WXV6	OTUD5	OTU domain-containing protein 5	1	QAPGVGAVGGGS(0.001)PEREEVGAGY(0.2)NS(0.797)EDEY(0.002)EAAAAR;QAPGVGAVGGGSPEREEVGAGY(0.398)NS(0.485)EDEY(0.117)EAAAAR	88.721	1.5614000000000002e-07	30248000.0	518.59	386.14399999999995	640.9100000000001	558.84	562.8299999999999	509.67	553.1	681.96	546.94	724.69	True	False	495.7934045421329	449.9477326742523	506.3917495533704	509.8473648550735	636.852010244342	608.1565142541823	677.1467545233245	657.9750802613926	521.5128787797778	593.4416186103227	0.8354543884251746	0.7582005012184793	0.8533135083097151	0.8591365163248846	1.0731502312488201	1.0247958605908325	1.141050329616275	1.1087444149977035	0.8787939073114179	1.0	9.212962297680262	-7.677926645763498	4.154239342158493	1.0480409962040615	0.8164595462260076	0.6814110943326767	0.07082194990421134	0.12370454459647148	4.011552454622053	0.021810966415701207	0.02818417727165525	2.0992944336870214e-08	7.677926645763498	-0.23158144997805397	
QAPLPS(ph)PESLDLGR	ddPTM_K562_Methotrexat_30min_R1	2	QAPLPSPESLDLGR	14	0	H3BRS1;Q12968	H3BRS1	NFATC3	Nuclear factor of activated T-cells, cytoplasmic 3	1	QAPLPS(0.525)PES(0.475)LDLGR;QAPLPS(0.99)PES(0.01)LDLGR	117.13	0.0013371	37465000.0	3692.3999999999996	3184.2999999999997	4380.4	3522.5	3266.9	3231.7000000000003	2971.81	3292.4	3414.6	3491.7	True	False	3530.0865171549244	3710.451451154546	3461.0139017078586	3213.6878940340653	3696.5546119916153	3856.1802874707964	3638.3140418730068	3176.6044258499146	3255.855991299647	2859.3192947352177	1.2345898283045098	1.2976695040622057	1.2104328145795133	1.123934602180084	1.2928093126213553	1.34863577305657	1.2724406289889099	1.110965267747084	1.1386822021921654	1.0	11.481456016631956	-9.734260125486838	1.438385838236631	1.0174390317083346	1.2529386800521582	0.6068338872455474	0.06400018199001635	0.2834944774616478	1.1575049523366452	0.06491155945178606	0.020178395261172627	1.843910657660569e-10	9.734260125486838	0.23549964834382364	
QAPLPS(ph)PESLDLGRSDGL	ddPTM_K562_Methotrexat_30min_R1	1	QAPLPSPESLDLGRSDGL	18	1	H3BRS1;Q12968	H3BRS1	NFATC3	Nuclear factor of activated T-cells, cytoplasmic 3	1	QAPLPS(0.631)PES(0.362)LDLGRS(0.007)DGL	79.92	0.021629	10917000.0	2228.2	1892.4	3032.9	3408.4	1947.7	2226.8	2655.8	2255.9	2424.1	2919.6	True	False	2130.250995971346	2205.086934699894	2396.335737030811	3109.5908638823867	2203.8566891475307	2657.097584596334	3251.4307551311636	2176.5587183437074	2311.404120104691	2390.8321484975627	0.8910081777635582	0.9223093875852414	1.002301955215345	1.3006311906239438	0.9217948196540982	1.1113693557559432	1.3599577691702092	0.9103770499788083	0.9667780825003607	1.0	11.223297131971979	-6.93491363358039	4.51987295171903	1.0884100891631543	0.9111714028231412	0.19102856115054678	0.1423780762200442	0.33234876052613627	13.448574019130266	0.03858435482070325	0.08395649961465004	1.1616796094834411e-07	6.93491363358039	-0.17723868634001305	
QAPLPSPES(ph)LDLGRSDGL	ddPTM_K562_Methotrexat_30min_R1	1	QAPLPSPESLDLGRSDGL	18	1	H3BRS1;Q12968	H3BRS1	NFATC3	Nuclear factor of activated T-cells, cytoplasmic 3	1	QAPLPS(0.215)PES(0.783)LDLGRS(0.002)DGL	104.16	0.0018399	11595000.0	821.71	918.93	1110.2	1102.6	997.42	1069.0	1017.6	1121.5	922.35	1051.5	True	False	785.5886122877731	1070.7675633606918	877.1841917806735	1005.936769896937	1128.598212707054	1275.569120681461	1245.822703675529	1082.056209327748	879.4701498199588	861.0631607566744	0.9123472563817773	1.2435412547666491	1.0187222398526867	1.1682496891551513	1.3107031680640924	1.4813885656895742	1.4468424158115654	1.256651380111155	1.0213770486326565	1.0	9.749975255931535	-6.260468943033111	23.22267080966232	1.2351557836478697	0.9123470210481494	0.23261322964635645	0.16248110540107868	46.366795566726246	1109080.561404854	0.04342787988613355	0.25563436471043693	5.489478101799299e-07	6.260468943033111	-0.32280876259972036	
QAQAQES(ph)EEEEESR	ddPTM_K562_Methotrexat_30min_R1	5	QAQAQESEEEEESR	14	0	H0YLQ7;Q9NVM6	H0YLQ7	DNAJC17	DnaJ homolog subfamily C member 17	1	QAQAQES(0.935)EEEEES(0.065)R;QAQAQES(0.929)EEEEES(0.071)R;QAQAQES(0.997)EEEEES(0.003)R;QAQAQES(0.999)EEEEES(0.001)R;QAQAQES(1)EEEEESR	222.42	2.5167e-27	122253800.0	9390.199999999999	7708.360000000001	10233.619999999999	9597.400000000001	8097.750000000001	8379.3	7357.740000000001	9099.53	8927.77	10044.57	True	False	8977.418051508008	8982.035470282854	8085.723012691896	8756.010842924783	9162.746061787959	9998.481134636268	9007.900491098262	8779.494372237295	8512.719921351043	8225.401039126642	1.0914261819945517	1.091987542924296	0.9830186971102899	1.0645086848986611	1.1139573642917284	1.2155615376168805	1.0951320729833622	1.067363686034874	1.0349306837268701	1.0	13.005870305522656	-9.810147637493028	2.1093947188772497	1.0026538391846205	1.0929857774300955	0.2507858253152584	0.053422100977726684	0.48203891942877325	4.240840682982559	0.05654446686142525	0.016153006004147225	1.5482901914539574e-10	9.810147637493028	0.09033193824547503	
QAQAQES(ph)EEEEESRSTR	ddPTM_K562_Methotrexat_30min_R1	2	QAQAQESEEEEESRSTR	17	1	H0YLQ7;Q9NVM6	H0YLQ7	DNAJC17	DnaJ homolog subfamily C member 17	1	QAQAQES(1)EEEEESRSTR;QAQAQES(1)EEEEESRSTR	83.06299999999999	0.0090457	15547600.0	2197.58	1936.37	2372.7	2444.2	1775.8600000000001	2070.25	2084.75	1785.1	2099.02	2460.1	True	False	2100.9770145079933	2256.322229837683	1874.7026948639916	2229.920780865311	2009.4167171481913	2470.2965127135612	2552.3082561788133	1722.3170211956874	2001.437018349966	2014.5520511435984	1.0429003377278507	1.120011879840404	0.9305804204958523	1.1069065103577018	0.997450880461246	1.226226203145881	1.2669358702992795	0.8549379601375808	0.9934898516093503	1.0	10.976243366374268	-9.283308099263026	24.993590157831484	0.9431604416589218	1.0943927967303455	0.3166551079930623	0.10019721339860188	1061.0907775845594	1212704.9405146395	0.05698436904608584	0.027412221180770337	5.208250937902631e-10	9.283308099263026	0.15123235507142374	
QAQTQT(ph)SPEHLVLQQK	ddPTM_K562_Methotrexat_30min_R1	1	QAQTQTSPEHLVLQQK	16	0	H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3	H0Y5D5	CIZ1	Cip1-interacting zinc finger protein	1	QAQT(0.026)QT(0.487)S(0.487)PEHLVLQQK	124.45	0.00054578	51765000.0	3045.7	2215.8	4091.4	3017.1	2090.4	2058.4	2025.3	2346.8	2831.1	3408.4	True	False	2911.814674818207	2581.923287839793	3232.67105228918	2752.5955273499426	2365.324240383015	2456.156667923966	2479.525080340063	2264.261713821098	2699.482778939975	2791.1057319287206	1.0432477141616823	0.9250539161967262	1.158204440379737	0.9862025275007527	0.8474506047280838	0.8799941327291471	0.8883665896191801	0.811241827179524	0.9671732417942362	1.0	11.446621061893001	-7.591284239246298	5.575364481306813	0.8890512000524474	1.0369925939778324	0.4363625600116232	0.07326603856917753	0.1714071750230285	9.861726264488388	0.02095484614522993	0.027338099665837945	2.562806169180777e-08	7.591284239246298	0.14794139392538497	
QAQTQTS(ph)PEHLVLQQK	ddPTM_K562_Methotrexat_30min_R1	4	QAQTQTSPEHLVLQQK	16	0	H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3	H0Y5D5	CIZ1	Cip1-interacting zinc finger protein	1	QAQTQT(0.043)S(0.957)PEHLVLQQK;QAQT(0.001)QT(0.003)S(0.997)PEHLVLQQK;QAQTQT(0.455)S(0.545)PEHLVLQQK;QAQT(0.002)QT(0.032)S(0.965)PEHLVLQQK	333.07	0.0	90328000.0	8765.6	6599.02	11965.0	9030.300000000001	7036.299999999999	6434.139999999999	6485.8	7764.299999999999	8593.0	10185.2	True	False	8380.274719633082	7689.39589083877	9453.710011399535	8238.627619445222	7961.6967817676095	7677.446494051845	7940.405750293577	7491.225168152863	8193.51330558129	8340.561583394083	1.0047614463177237	0.9219278359083432	1.1334620477141146	0.9877785251113295	0.9545756244542589	0.9204951509904934	0.9520229148721581	0.8981679582664752	0.9823694991826972	1.0	13.025928810574383	-7.673190833854357	4.076445711824492	0.9444430947224071	1.0169924569132285	0.231007820736854	0.05509357541658323	0.30348790003166337	9.447530836454591	0.016602472644760453	0.021499219559929245	2.122311689578488e-08	7.673190833854357	0.07254936219082142	
QAREES(ph)EESEAEPVQR	ddPTM_K562_Methotrexat_30min_R1	1	QAREESEESEAEPVQR	16	1	Q9BW71	Q9BW71	HIRIP3	HIRA-interacting protein 3	1	QAREES(0.997)EES(0.003)EAEPVQR	94.61	0.011689	4185800.0	858.38	791.89	1450.1	1231.7	903.9	1152.8	907.45	855.27	1045.8	1042.9	True	False	820.646642995191	922.7363626714739	1145.7438267890059	1123.7187733376168	1022.7786934951234	1375.5622846787548	1110.9687622350218	825.1896693283488	997.1809862652066	854.0207040923781	0.9609212505771089	1.0804613497656643	1.3415878810650854	1.3157980455893794	1.1976040962403776	1.610689621559763	1.3008686521431805	0.9662408245773505	1.1676309268461753	1.0	9.73812723541596	-9.252995251277563	24.615802411653277	1.0502019048308342	1.2680743791155673	0.25083830024248366	0.16852581172135364	740.6534090200636	2159116.4341179505	0.08669446969179984	0.048973201578377326	5.584763012718064e-10	9.252995251277563	0.2178724742847331	
QAS(ph)LDGLQQLR	ddPTM_K562_Methotrexat_30min_R1	2	QASLDGLQQLR	11	0	Q3MII6	Q3MII6	TBC1D25	TBC1 domain family member 25	1	QAS(1)LDGLQQLR;QAS(1)LDGLQQLR	119.62	8.628e-08	0.0	1496.87	1190.98	1476.6100000000001	1293.1799999999998	1321.06	1228.03	1296.84	1325.52	1296.49	1625.73	True	False	1431.0693871015308	1387.7692018013513	1166.6897400695916	1179.8089171914744	1494.8025454460321	1465.3294174653463	1587.6893819129054	1278.9007102881121	1236.2164628829387	1331.2945433542072	1.0749457317656692	1.0424208592524205	0.8763573364689886	0.8862117876776813	1.1228188028772845	1.1006801047748886	1.1925906177852343	0.9606444469199968	0.9285822352792654	1.0	10.378614081475597	-6.526225128934282	24.992199630645732	1.0128460078089927	1.0668145688524597	0.042917035718449514	0.09840674479941057	365.5855001196923	2730374.3963198806	0.027970539051855394	0.07478521036849684	2.9769728305854556e-07	6.526225128934282	0.053968561043467034	
QAS(ph)PTEVVER	ddPTM_K562_Methotrexat_30min_R1	1	QASPTEVVER	10	0	C9JW01;A0A0A0MR59;Q8TB72-2;Q8TB72-4;Q8TB72-3;Q8TB72;A0A0C4DG68	C9JW01	PUM2	Pumilio homolog 2	1	QAS(0.859)PT(0.141)EVVER	131.79	0.0010531	59980000.0	2519.9	3196.8	3592.6	3077.5	2788.3	3025.4	2828.2	2960.0	2778.8	3330.0	True	False	2409.1282132430656	3725.0168636908766	2838.562355783867	2807.700353126992	3155.01032312474	3610.0157321886745	3462.4958436862526	2855.89512225603	2649.6141945245326	2726.9047316402534	0.8834662191494886	1.36602383664876	1.040946653855579	1.029629059112065	1.156993233579883	1.323851064652788	1.2697531393418118	1.0473028592158362	0.9716563119279822	1.0	11.41304858315838	-9.483298910576705	7.696644214988528	0.9931177203218844	1.1590165786134656	0.19981608555238706	0.1376281587203567	0.3941660213110585	69.33207831278028	0.07787564346468125	0.03612704464172452	3.286253710105745e-10	9.483298910576705	0.16589885829158124	
QASASYDS(ph)EEEEEGLPMSYDEKR	ddPTM_K562_Methotrexat_30min_R1	1	QASASYDSEEEEEGLPMSYDEKR	23	1	Q15059	Q15059	BRD3	Bromodomain-containing protein 3	1	QAS(0.014)AS(0.008)YDS(0.978)EEEEEGLPMSYDEKR	81.345	0.00044345	22444000.0	581.52	469.18	741.82	750.72	474.11	548.86	553.32	620.46	555.0	744.17	True	False	555.9570770923875	546.7040203035806	586.1221195701131	684.9055431679923	536.4637751664712	654.9194271068544	677.4160951235687	598.6380701199245	529.1981711390224	609.3936018452632	0.9123119694872605	0.8971279295485601	0.9618120666106711	1.1239132493253563	0.8803239376685968	1.074706766076535	1.111623248213193	0.9823504354283165	0.8684012591149521	1.0	9.251230542712536	-6.996610937045008	10.285344523029806	1.0099434683833197	0.9107485129175914	0.19810593412212385	0.08087410168554199	0.19145684791950904	370.04831132795783	0.021660405791264194	0.04316949633267466	1.0078341333279272e-07	6.996610937045008	-0.09919495546572832	
QASNMDHRYT(ph)GDSALLWPS(ph)Y(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	QASNMDHRYTGDSALLWPSYK	21	1	C9JRV4	C9JRV4	NDUFB2		3	QAS(0.026)NMDHRY(0.438)T(0.526)GDS(0.079)ALLWPS(0.955)Y(0.976)K	42.716	0.029017	4459000.0	1275.9	1442.6	1333.3	1312.9	1516.4	1527.2	1363.0	1815.8	1547.7	1427.6	True	False	1219.8129637195225	1680.9651299926365	1053.458550622565	1197.8000954087506	1715.8331793517048	1822.3097858790734	1668.6874460591068	1751.9372847947627	1475.7477648141712	1169.0478062731602	1.043424363977208	1.437892548938124	0.9011252961338807	1.0245946222056141	1.4677185741630676	1.5587983452006682	1.427390254791001	1.498601918068528	1.2623502280191161	1.0	10.191118212361415	-7.764460868295972	24.99991933538041	1.4064684462062003	1.1114377229002417	0.2973423154326662	0.1961735554359497	89.61975955591451	741518.036909351	0.05878158929234059	0.06952954800977645	1.7200423170838778e-08	7.764460868295972	-0.2950307233059586	
QASPT(ph)EVVER	ddPTM_K562_Methotrexat_30min_R1	1	QASPTEVVER	10	0	C9JW01;A0A0A0MR59;Q8TB72-2;Q8TB72-4;Q8TB72-3;Q8TB72;A0A0C4DG68	C9JW01	PUM2	Pumilio homolog 2	1	QAS(0.145)PT(0.855)EVVER	107.93	0.008362999999999999	26826000.0	1183.3	1212.1	1662.5	1761.2	1441.7	1144.6	1316.7	1392.9	1461.2	1640.9	True	False	1131.2835488434132	1412.3789228227322	1313.5639694067468	1606.7983304394013	1631.3088200154002	1365.7777507315254	1612.0034924622344	1343.9109174967643	1393.2691309339443	1343.7171093539012	0.8419060388293841	1.0510984142353041	0.9775599047319916	1.1957861660420455	1.214026976853619	1.0164176233405495	1.199659869804987	1.0001442328459718	1.0368768256615184	1.0	10.392013726431903	-5.880267789037903	1.255814231454242	1.0941923063120782	0.4926055509347426	0.405406978983855	0.0863086094916022	3.299903644707277	2.373774213911463	0.025622425128269476	3.224884053207747	1.3174441427139034e-06	5.880267789037903	-0.6015867553773355	
QATDFQGNDFDNDHNRR	ddPTM_K562_Methotrexat_30min_R1	2	QATDFQGNDFDNDHNRR	17	1	Q16384	Q16384	SSX1	Protein SSX1	0	;	75.316	0.0082793	46092000.0	7529.2	6123.0	8177.900000000001	7314.5	7145.2	6178.1	5427.1	6426.6	7225.6	7776.799999999999	False	True	7198.225383209525	7134.721676795306	6461.470547615898	6673.249141493874	8084.919040559089	7371.930387728851	6644.265325390589	6200.572835368442	6889.683433120938	6368.346161267241	1.130313145819502	1.120341372174336	1.014623009489504	1.0478778905080688	1.2695476715339649	1.1575894590287013	1.0433266592512682	0.9736551183540856	1.0818638401009841	1.0	12.636703042586737	-8.898158799217537	5.689837509408615	1.018610497232763	1.121139625990415	0.3374558741668058	0.06825583939252834	0.2734626371862721	12.929214898036642	0.031694480375911896	0.02118034166490634	1.2642739827925185e-09	8.898158799217537	0.10252912875765197	
QATPGVPAQQS(ph)PSM	ddPTM_K562_Methotrexat_30min_R1	3	QATPGVPAQQSPSM	14	0	R4GMQ1;O60341;O60341-2	R4GMQ1	KDM1A	Lysine-specific histone demethylase 1A	1	QATPGVPAQQS(1)PSM;QATPGVPAQQS(1)PSM;QATPGVPAQQS(1)PSM	143.05	2.8377e-06	68650900.0	7654.2	6776.5	9347.9	9129.2	7273.700000000001	7258.1	6413.2	7752.299999999999	7939.4	8394.1	True	False	7317.730532880297	7896.201444194583	7385.903536611928	8328.85720999738	8230.319042897974	8660.625102729768	7851.5233522129565	7479.647214954534	7570.299026920992	6873.847149507942	1.064575684288256	1.1487310195368288	1.0744934206371815	1.2116733219174933	1.197338093775788	1.2599385634214648	1.142231298054831	1.0881311516346357	1.1013190811877311	1.0	12.746902056200835	-9.923405158989413	1.266130087440104	1.0053733498015196	1.1593488525618552	0.4006839152161109	0.05762801801401487	0.47094915442564644	1.6872079281272576	0.058732608955252764	0.018322938016787603	1.1928747367992542e-10	9.923405158989413	0.15397550276033556	
QATPLLYALAAEAEAAAQAAEPPS(ph)PPASR	ddPTM_K562_Methotrexat_30min_R1	1	QATPLLYALAAEAEAAAQAAEPPSPPASR	29	0	Q2M3G4-2;Q2M3G4;C9JXU1;A6NN40	Q2M3G4-2	SHROOM1	Protein Shroom1	1	QATPLLYALAAEAEAAAQAAEPPS(0.5)PPAS(0.5)R	70.718	0.00011479	44067000.0	536.89	442.69	869.41	578.93	453.0	480.5	362.61	471.08	579.66	501.4	True	False	513.2889584539342	515.836998056592	686.9327221906285	528.1761057468109	512.5774401518872	573.349824590685	443.9345229754162	454.51184938931414	552.7117331215233	410.59160133466156	1.2501204525018206	1.2563262287387802	1.673031596256956	1.2863782503829384	1.2483875424770317	1.3963992997590904	1.0812070230671322	1.1069682085846038	1.3461350191404027	1.0	8.681560307146333	-8.758273325895033	24.99648341614644	1.1424915668685207	1.3543660937420812	0.3555701793889994	0.14368003177799613	99.72309692866327	787337.9486101725	0.0576078630034775	0.04269257234951621	1.74472375472225e-09	8.758273325895033	0.21187452687356045	
QAVDVSPLRR	ddPTM_K562_Methotrexat_30min_R1	2	QAVDVSPLRR	10	1	M0QZN2;M0R0F0;M0R0R2;P46782	M0QZN2	RPS5	40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed	0	;	170.89	0.00010029	16073800.0	6535.299999999999	5864.299999999999	7785.1	7395.9	6554.1	6154.4	5837.4	6629.5	6737.4	8136.5	False	True	6248.016037147267	6833.275898943444	6151.113899686296	6747.512929875525	7416.079029800193	7343.650698149667	7146.585544846238	6396.336727363627	6424.179744562246	6662.901005702981	0.9377320827368437	1.0255706775614157	0.9231885472140993	1.0126989616234914	1.1130405544750768	1.1021701645970743	1.07259368535256	0.9599927601939164	0.9641715731726457	1.0	12.70193474353268	-6.2598532323412055	23.214666042088734	1.0219989232673135	0.9377320063911453	0.1452693087235054	0.05900109609609071	113.75966256392717	1664512.6745042943	0.0164602334129959	0.10110280722377704	5.497266198452286e-07	6.2598532323412055	-0.08426691687616816	
QAVGGAGPPNPAINGS(ph)APR	ddPTM_K562_Methotrexat_30min_R1	2	QAVGGAGPPNPAINGSAPR	19	0	H0Y539;X6R6D0;P29353-5;P29353-3;P29353-2;P29353-7;P29353;P29353-6	H0Y539	SHC1	SHC-transforming protein 1	1	QAVGGAGPPNPAINGS(1)APR;QAVGGAGPPNPAINGS(1)APR	168.62	1.0256e-56	11477000.0	2451.99	2116.21	2897.3	2337.92	2383.1	2365.6	2295.8	2718.8	2496.3	3294.8	True	False	2344.203455529925	2465.877733080352	2289.1963239471693	2132.958183454967	2696.519420807864	2822.7187201908932	2810.6915910950083	2623.1782629694894	2380.2475578636795	2698.079792735225	0.8688414115260277	0.9139380309358922	0.8484539004780347	0.7905467396472526	0.9994216731723197	1.0461954193464802	1.0417377568532253	0.9722389493567191	0.882200579935652	1.0	11.397717299694438	-7.779136191009618	24.993420420749946	0.9942778011138249	0.8591237321599969	0.6261516562022857	0.05096057820057076	169.87214787165544	239911.33822472053	0.01712484483872006	0.01945878439422149	1.6628911002684983e-08	7.779136191009618	-0.13515406895382798	
QCEGITS(ph)PEGSK	ddPTM_K562_Methotrexat_30min_R1	1	QCEGITSPEGSK	12	0	Q9Y570-2;Q9Y570;Q9Y570-4	Q9Y570-2	PPME1	Protein phosphatase methylesterase 1	1	QCEGIT(0.236)S(0.764)PEGSK	94.54700000000001	0.012937	27719000.0	2608.7	2039.2	3827.4	2740.7	2026.2	1873.1	2067.9	2703.6	2345.0	3565.3	True	False	2494.024671569182	2376.143139526538	3024.08104451572	2500.4270862112594	2292.6808150899665	2235.0500654335315	2531.6792147510073	2608.5128555849333	2235.981461839653	2919.5896215366342	0.8542380933168718	0.8138620311562588	1.0357897638107405	0.8564310092646644	0.785275025701484	0.7655356934229623	0.8671352973979054	0.893451886642899	0.7658547096296412	1.0	11.511549882335368														
QDDATGAGQDS(ph)ENEVSLVSGHQR	ddPTM_K562_Methotrexat_30min_R1	2	QDDATGAGQDSENEVSLVSGHQR	23	0	P16157-10;P16157-8;P16157-5;P16157-16;P16157-3;P16157;P16157-21;P16157-12;P16157-14	P16157-10	ANK1	Ankyrin-1	1	QDDATGAGQDS(1)ENEVSLVSGHQR;QDDATGAGQDS(1)ENEVSLVSGHQR	148.69	1.8687000000000002e-17	70694000.0	2835.8	2077.52	2489.5	2780.5	2336.2	2600.5	2255.5	2421.2	2418.7	2561.4	True	False	2711.1416274910453	2420.7948681979074	1966.9879710304344	2536.7378820047456	2643.451248747988	3103.009820703595	2761.3532902320717	2336.0450236507745	2306.255164926041	2097.50563952653	1.292555107552908	1.1541303263167164	0.9377748187959307	1.2094069423228646	1.2602832616672697	1.4793809190444118	1.316493857368313	1.113725264728294	1.0995227480993242	1.0	11.034458974281188	-9.46978622085546	4.613183976044268	1.063624084680421	1.23038604455789	0.2551542681392499	0.13101492028106632	0.36174746613931347	16.32609181015638	0.09188003711103591	0.03950958681174254	3.3901099142802353e-10	9.46978622085546	0.166761959877469	
QDDS(ph)PPRPIIGPALPPGFIK	ddPTM_K562_Methotrexat_30min_R1	2	QDDSPPRPIIGPALPPGFIK	20	1	A0A0A0MRI1;Q8IXQ4-4;Q8IXQ4	A0A0A0MRI1	GPALPP1	GPALPP motifs-containing protein 1	1	QDDS(1)PPRPIIGPALPPGFIK;QDDS(1)PPRPIIGPALPPGFIK	106.69	0.0001456	43951000.0	4021.1	3371.8	6489.5	4942.6	2746.1	2863.8	3147.9	3780.0	4159.700000000001	5043.7	True	False	3844.33725872919	3928.932639199483	5127.442634264708	4509.289931881549	3107.260283446131	3417.1888192774277	3853.896706859471	3647.0552574756052	3966.3164549315165	4130.23705554773	0.9307788407848117	0.9512608081229006	1.2414402769878627	1.0917750897190455	0.7523200827595264	0.827359004657484	0.9330933442870842	0.883013543393807	0.9603120599588744	1.0	12.012008872371796	-7.738336795802278	24.999976575689807	0.8855879674445947	1.059890499339205	0.37177149003421117	0.10224254052941964	255.25914783250974	276222.2268274914	0.03190032962926619	0.04115598407219889	1.826683072177826e-08	7.738336795802278	0.17430253189461042	
QDGPMPKPHSVS(ph)LNDTETR	ddPTM_K562_Methotrexat_30min_R1	1	QDGPMPKPHSVSLNDTETR	19	1	Q9P0L0;Q9P0L0-2	Q9P0L0	VAPA	Vesicle-associated membrane protein-associated protein A	1	QDGPMPKPHS(0.011)VS(0.858)LNDT(0.093)ET(0.038)R	68.406	0.022549	12030000.0	1586.4	1387.0	2432.8	1783.2	1177.9	1320.9	1185.0	1805.8	1474.4	2163.4	True	False	1516.6637555017248	1616.1781750310458	1922.1885261790892	1626.8696245966053	1332.8144961477003	1576.1452305969524	1450.766414952341	1742.2889904628164	1405.8554658150883	1771.587296225383	0.85610444302304	0.9122769047139487	1.0850092063058836	0.9183118596881344	0.752327869469063	0.8896796866601789	0.8189076643546743	0.9834621156829298	0.7935569806864511	1.0	10.790826841695203	-7.5280568019722	24.998725147334856	0.8671132787106682	0.9563141444144571	0.13122483274921737	0.0900882108965971	246.11710642457203	1188201.0163804863	0.026038973607874744	0.033731952506371975	2.9644436405095883e-08	7.5280568019722	0.08920086570378882	
QDPSVLHTEEMR	ddPTM_K562_Methotrexat_30min_R1	1	QDPSVLHTEEMR	12	0	F8WAQ7;Q3KNR6;Q8NFI4;P50502	F8WAQ7	ST13;ST13P5	Putative protein FAM10A5;Hsc70-interacting protein	0		64.53399999999999	0.032871	0.0	3683.0	3268.8	4125.3	3430.8	3444.7	2926.8	2845.2	3513.8	3920.9	3643.8	False	True	3521.0997298996817	3808.91363990013	3259.455905560093	3130.027090660629	3897.738428457412	3492.36267765248	3483.3085264324036	3390.2176623591986	3738.6182148089933	2983.87251085608	1.1800436235425722	1.2765001272816925	1.0923576304622167	1.048981509522542	1.3062684194034622	1.1704128326349013	1.167378470011453	1.1361804668345354	1.2529416726776892	1.0	11.542970180883621	-12.601948221166154	4.7636820883709055	0.9977247058717483	1.1791551092150354	0.33877254977824045	0.07590783718959493	0.0018662292472140683	0.00015594135868428487	0.07477716952419616	0.017919834511639816	2.5006434835710675e-13	12.601948221166154	0.18143040334328708	
QDWTIQWPTT(ph)ETGK	ddPTM_K562_Methotrexat_30min_R1	1	QDWTIQWPTTETGK	14	0	E9PB13;Q6VAB6	E9PB13	KSR2	Kinase suppressor of Ras 2	1	QDWTIQWPT(0.069)T(0.926)ET(0.005)GK	77.192	0.028216	0.0	1719.6	1456.1	3470.5	2211.6	1487.8	1404.9	1264.5	1221.7	1079.2	1070.9	True	False	1644.0084429909014	1696.6957755318715	2742.0894771886396	2017.7124617305135	1683.4717780529313	1676.3770417636913	1548.0963136769917	1178.7321185338483	1029.028227555374	876.9496327668309	1.8746896988872122	1.934769925358986	3.1268494503352215	2.300830499654244	1.919690384887297	1.9116001411330967	1.7653195301452504	1.3441275011597587	1.1734177073644763	1.0	9.776350174241534	-9.022401229586054	0.8399957054179671	1.0102067453727384	2.3079717340546018	0.6667948108383078	0.3311547632822204	0.40305525011020477	0.5282168918336093	0.3093817389043117	0.15280522268190783	9.497269684664387e-10	9.022401229586054	1.2977649886818634	
QEAEDLSLSAPSSPEIS(ph)PQSSPRPHRPNNDR	ddPTM_K562_Methotrexat_30min_R1	2	QEAEDLSLSAPSSPEISPQSSPRPHRPNNDR	31	2	Q9UPU5	Q9UPU5	USP24	Ubiquitin carboxyl-terminal hydrolase 24	1	QEAEDLSLSAPS(0.005)S(0.035)PEIS(0.378)PQS(0.291)S(0.291)PRPHRPNNDR;QEAEDLSLS(0.001)APS(0.009)S(0.009)PEIS(0.62)PQS(0.18)S(0.18)PRPHRPNNDR	60.951	0.00046525	97829000.0	2371.9	2011.5	2557.0	2357.5	2257.6	1902.12	1799.6999999999998	2544.2	2553.2	2509.4	True	False	2267.634116032867	2343.866185346034	2020.3206434725128	2150.8216352548784	2554.51397105276	2269.677769719945	2203.3285375440746	2454.719043933711	2434.502289283156	2054.923343416832	1.1035127530656932	1.1406100343620416	0.9831610750565599	1.0466675762603346	1.2431188634050125	1.104507268843435	1.0722193334377532	1.1945550435239678	1.1847168397217085	1.0	11.004868861471664														
QEASTGQSPEDHASLAPPLS(ph)PDHSSLEAK	ddPTM_K562_Methotrexat_30min_R1	3	QEASTGQSPEDHASLAPPLSPDHSSLEAK	29	0	P48681	P48681	NES	Nestin	1	QEASTGQSPEDHASLAPPLS(0.956)PDHS(0.032)S(0.012)LEAK;QEASTGQSPEDHASLAPPLS(0.971)PDHS(0.022)S(0.007)LEAK;QEASTGQSPEDHAS(0.001)LAPPLS(0.759)PDHS(0.12)S(0.12)LEAK	131.92	1.5309999999999999e-24	78184000.0	6777.8	4928.9	9286.1	5978.299999999999	4890.9	4253.6	4038.8	6464.3	6232.2	7375.6	True	False	6479.856027508571	5743.316948024891	7337.074512064957	5454.191720909535	5534.139077348492	5075.54799974805	4944.603710303386	6236.946904999882	5942.466382292994	6039.807368974727	1.0728580617975145	0.9509106163761368	1.2147861784059588	0.9030406745961169	0.9162774140407605	0.8403493174004384	0.8186691078432101	1.0326400370047926	0.9838834286037409	1.0	12.560286822249433	-7.311521446650118	24.999300277149917	0.9205214446126685	1.0666578369177533	0.38619843585069913	0.08683611739083227	379.59005800280954	189477.76867760785	0.025042140325612913	0.037143560128015216	4.8806599861767604e-08	7.311521446650118	0.1461363923050848	
QEDVIAT(ph)ANLSR	ddPTM_K562_Methotrexat_30min_R1	1	QEDVIATANLSR	12	0	Q9Y490;H0YMT1;A0A1B0GVU7;Q9Y4G6	Q9Y490	TLN1;TLN2	Talin-1;Talin-2	1	QEDVIAT(1)ANLSR	85.973	0.012676	0.0	219.93	250.73	201.29	185.47	167.97	168.15	212.58	231.59	162.23	149.86	True	False	210.26214053674636	292.1588708186982	159.04197979060692	169.21013306075173	190.06099916625286	200.6426077105592	260.25647636334884	223.44484843353843	154.68796270970006	122.71890182690942	1.7133639350302656	2.3807161445331193	1.2959860088621873	1.378843279574132	1.5487508145593336	1.634977209896796	2.1207529768350697	1.8207859189344713	1.2605064126786423	1.0	6.939213667559038	-6.766429889804556	24.99978443024618	1.5602113699280635	2.047040038548222	0.28421267784887483	0.3341970456193078	155.17647660090603	777366.475055321	0.08856139143658438	0.19402549020009288	1.71226157281004e-07	6.766429889804556	0.4868286686201584	
QEEAEEQGAGS(ph)PGQPAHLAR	ddPTM_K562_Methotrexat_30min_R1	2	QEEAEEQGAGSPGQPAHLAR	20	0	Q96S99	Q96S99	PLEKHF1	Pleckstrin homology domain-containing family F member 1	1	QEEAEEQGAGS(1)PGQPAHLAR;QEEAEEQGAGS(1)PGQPAHLAR	200.57	7.617999999999998e-125	14545000.0	5819.4	5121.9	5946.6	5340.0	5058.3	5220.6	4201.8	6213.5	6336.6	6719.900000000001	True	False	5563.5861439528135	5968.206917585802	4698.489925097242	4871.850490884855	5723.55511152382	6229.4070640127575	5144.16060957531	5994.967683154671	6042.01284908023	5502.860992837639	1.011035196272305	1.0845643612211617	0.8538267514321473	0.885330466683769	1.0401053413803165	1.1320306059194971	0.934815656123387	1.08942742528978	1.0979766446843442	1.0	12.425966170029936	-7.927365784226219	10.856197559677366	1.0532727393975643	0.9603216215478982	0.2426408720442127	0.0783275299649338	0.7306205146250319	105.15421814480601	0.025539345383563578	0.02896820400100788	1.1820455592927729e-08	7.927365784226219	-0.09295111784966603	
QEIY(ph)S(ph)SEERDERLT(ph)RMYNVR	ddPTM_K562_Methotrexat_30min_R1	1	QEIYSSEERDERLTRMYNVR	20	3	Q9UP52-2;Q9UP52-3;Q9UP52	Q9UP52-2	TFR2	Transferrin receptor protein 2	3	QEIY(0.896)S(0.73)S(0.373)EERDERLT(0.999)RMY(0.001)NVR	51.46	0.027768	41750000.0	3522.5	3737.1	4063.2	3752.4	3755.9	4174.9	3641.6	4029.3	4029.0	3749.2	True	False	3367.6551177224087	4354.592255161155	3210.389846913381	3423.4329179768397	4249.86668314895	4981.640338571598	4458.321499316831	3887.587235171019	3841.692669403822	3070.1835495091977	1.0968904833917064	1.4183491589150374	1.0456670733665407	1.1150580617644548	1.3842386341456157	1.6225871379474908	1.4521351663256559	1.266239354253752	1.2512908780382066	1.0	11.584109193694307	-6.235041917799963	22.516152455238643	1.2985194201747494	1.0968894473482451	0.07997795480305447	0.18447314450868776	5768.588558876556	4920112.769047488	0.048745972012446175	3.055195694646477	5.820470362863351e-07	6.235041917799963	-0.2016299728265043	
QEKPAEKPAETPVAT(ph)SPTATDSTSGDSSR	ddPTM_K562_Methotrexat_30min_R1	1	QEKPAEKPAETPVATSPTATDSTSGDSSR	29	2	H0Y579;P54727-2;P54727	H0Y579	RAD23B	UV excision repair protein RAD23 homolog B	1	QEKPAEKPAET(0.006)PVAT(0.518)S(0.424)PT(0.023)AT(0.023)DS(0.002)T(0.002)S(0.002)GDSSR	68.304	0.00031431	370160000.0	1608.8	920.59	3080.3	1508.2	1338.4	1121.0	945.31	1354.9	1158.3	2329.8	True	False	1538.0790783227287	1072.7018501455152	2433.7871247901367	1375.9784476315613	1514.423059380322	1337.6173847370608	1157.3198309861577	1307.2473990353699	1104.450885820413	1907.8506437764147	0.80618421748059	0.5622567225819106	1.275669629973067	0.721219164676297	0.7937849140971858	0.7011122118497548	0.6066092410123624	0.6851937824901189	0.5788979810464903	1.0	10.897732518942027	-7.910637285459539	2.1315417877724734	0.6906076990056893	0.8557956118122421	0.08114518918689828	0.1990207765349982	0.7079980282761156	6.555087073434182	0.06928932821076703	0.08058283245320574	1.2284647934036402e-08	7.910637285459539	0.16518791280655276	
QEKPAEKPAETPVATS(ph)PTATDSTSGDSSR	ddPTM_K562_Methotrexat_30min_R1	3	QEKPAEKPAETPVATSPTATDSTSGDSSR	29	2	H0Y579;P54727-2;P54727	H0Y579	RAD23B	UV excision repair protein RAD23 homolog B	1	QEKPAEKPAETPVAT(0.24)S(0.625)PT(0.106)AT(0.017)DS(0.007)T(0.003)S(0.003)GDSSR;QEKPAEKPAETPVAT(0.214)S(0.592)PT(0.064)AT(0.108)DS(0.009)T(0.004)S(0.002)GDS(0.002)S(0.004)R;QEKPAEKPAET(0.002)PVAT(0.217)S(0.647)PT(0.046)AT(0.079)DS(0.004)T(0.003)S(0.001)GDSSR	118.33	1.4254e-12	819290000.0	12655.2	8670.4	21686.4	13082.6	8143.1	7412.5	6624.4	10290.9	10560.099999999999	16050.2	True	False	12098.892560908624	10103.036228398827	17134.721002190963	11935.668770046852	9214.060381679548	8844.86071754101	8110.0903284475	9928.96321406235	10069.16325593727	13143.353250382102	0.9205331645907703	0.7686802626342796	1.3036795615070929	0.9081144318859313	0.7010433491477281	0.6729531306848101	0.6170487982746506	0.7554360766932667	0.7661030685334841	1.0	13.682045775493073	-7.63689011699379	4.887952874609319	0.7301248396622858	0.9938633674336796	0.33132688209613714	0.15650923534491767	0.22592938820236866	8.716606562750142	0.04674533093540098	0.06079006044706621	2.3073309041368576e-08	7.63689011699379	0.26373852777139384	
QELGS(ph)PEER	ddPTM_K562_Methotrexat_30min_R1	1	QELGSPEER	9	0	V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF0	V9GYM8;V9GYF0	ARHGEF2	Rho guanine nucleotide exchange factor 2	1	QELGS(1)PEER	101.56	0.007698899999999999	29282000.0	1918.5	1714.5	2480.8	1817.1	1946.5	2044.7	1644.9	2068.1	1887.1	2279.5	True	False	1834.1650371470375	1997.7919834828597	1960.113982137899	1657.7976642297508	2202.498868114014	2439.80933681701	2013.8106970085275	1995.3637507897604	1799.3691328945029	1866.6604611933794	0.9825916792464939	1.0702492633318252	1.050064552652909	0.8881088439457812	1.1799140303780413	1.3070450612411906	1.0788307455342323	1.0689484200646213	0.9639509542855713	1.0	10.86624381506452	-7.7797670190425015	24.999651181393162	1.1125445774127205	1.006668283547299	0.19041396087006834	0.1003566292329339	422.49971341984906	576303.9716076193	0.03327590463671486	0.037801797229983614	1.6604774457538925e-08	7.7797670190425015	-0.10587629386542141	
QELIYKRNER	ddPTM_K562_Methotrexat_30min_R1	1	QELIYKRNER	10	2	A6NFA1	A6NFA1	TRABD2B	Metalloprotease TIKI2	0		89.171	0.026956	3559700.0	1961.5	1791.9	2349.1	2436.3	1921.6	2316.4	1939.3	3710.2	2803.5	2511.0	False	True	1875.2748086337845	2087.9810179078086	1856.0560123509094	2222.7133615997705	2174.3240816685793	2764.0115165075194	2374.237391153649	3579.7101630386223	2673.165896915764	2056.233567912514	0.9119950368953277	1.0154396127418173	0.9026484351362747	1.0809634646010893	1.0574304960286933	1.3442108715857317	1.1546535511352303	1.7409063925907697	1.3000302779949064	1.0	11.005788434471254	-8.148508378175379	1.3255339121296643	1.3685334288532411	0.9570196987476524	0.4120231332344314	0.18485727381809924	0.3740794090486838	1.3415771189422967	0.08113573499097453	0.08055725378979121	7.103814655739077e-09	8.148508378175379	-0.4115137301055888	
QELSHALYQHDAACR	ddPTM_K562_Methotrexat_30min_R1	1	QELSHALYQHDAACR	15	0	F5H2I0;F5GY56;Q9UMS4	F5H2I0	PRPF19	Pre-mRNA-processing factor 19	0		128.85	0.00018480000000000002	9670200.0	2625.8	2331.0	3089.4	3001.3	2155.1	2151.5	2714.7	2909.7	3104.9	3409.2	False	True	2510.372976044145	2716.1581297745993	2440.977159148994	2738.1806888188594	2438.533424440027	2567.2469253004356	3323.5405794693	2807.364201766341	2960.5538767018907	2791.760844176562	0.8992077459932235	0.9729193442340646	0.8743503814951482	0.9808077559833008	0.8734750433679356	0.9195798166793376	1.1904818374403372	1.0055890738715412	1.0604611361597898	1.0	11.44695964322309	-8.715581370589396	24.99652727174706	1.0645987957961875	0.9210258411425989	0.5893867020459267	0.0589096184120669	83.08916819452615	45290.50759394788	0.021194113062124192	0.016416828993621797	1.924946348131179e-09	8.715581370589396	-0.14357295465358866	
QEMQEVQSSR	ddPTM_K562_Methotrexat_30min_R1	1	QEMQEVQSSR	10	0	P22626;P22626-2	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	0		96.665	0.019894	1188900.0	56.839	151.73	0.0	183.03	123.74	53.226000000000006	168.19	136.9	164.33	184.09	False	True	54.34042561709691	176.8008035309737	0.0	166.9840440724073	140.0139789059482	63.511171204295145	205.91088888677987	132.08514940434137	156.69033416806406	150.74951713142764	0.360468322891684	1.1728117402647056	0.0	1.107692065950871	0.9287855879755826	0.4213026509990366	1.365914085862451	0.8761895355803087	1.039408531116269	1.0	7.236009570784261	-8.018629731972895	0.6704471523464883	1.0367172943706746	0.5892661251067589	0.16875758099881477	0.3695354097359329	1.5237541890489024	1.5198631820009256	0.25306562049990333	0.34369894327985295	9.580104977104007e-09	8.018629731972895	-0.4474511692639157	
QENCGAQQVPAGPGTST(ph)PPS(ph)SPVR	ddPTM_K562_Methotrexat_30min_R1	2	QENCGAQQVPAGPGTSTPPSSPVR	24	0	Q96G46-2;Q96G46	Q96G46-2	DUS3L	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like	2	QENCGAQQVPAGPGT(0.02)S(0.465)T(0.561)PPS(0.526)S(0.428)PVR;QENCGAQQVPAGPGT(0.011)S(0.152)T(0.847)PPS(0.551)S(0.438)PVR	137.7	3.3443e-16	38707000.0	2063.99	1879.88	2903.8	2208.75	2233.8599999999997	2325.11	1734.3400000000001	2569.0	2674.41	2234.07	True	False	1973.259470951844	2190.4982175035057	2294.332062774923	2015.1123168056045	2527.6517449397243	2774.4046007368333	2123.3098937623995	2478.6468138769387	2550.077262839481	1829.4582744190816	1.0786031573080967	1.1973480063102653	1.2541046138390095	1.10148033709349	1.3816394614096044	1.5165170146434774	1.160622203551828	1.3548528810606504	1.393897471451882	1.0	10.837200796280523	-7.763049445233489	24.99999722034589	1.322728963772825	1.1675757792459662	0.18899134130790662	0.1407878352174535	66.07361886713475	1025949.630868115	0.041476090101424355	0.04954476241129638	1.7256414133253114e-08	7.763049445233489	-0.15515318452685878	
QEQINTEPLEDTVLS(ph)PTK	ddPTM_K562_Methotrexat_30min_R1	1	QEQINTEPLEDTVLSPTK	18	0	O15446;O15446-2	O15446	CD3EAP	DNA-directed RNA polymerase I subunit RPA34	1	QEQINTEPLEDTVLS(0.994)PT(0.006)K	336.39	0.0	22427000.0	4875.5	3823.0	6816.6	4514.2	3888.8	3306.7	2803.0	4008.6	4728.1	5433.6	True	False	4661.178857758864	4454.685770110807	5385.8888143506965	4118.447094747642	4400.245362610729	3945.672976012523	3431.644102203724	3867.6152659038908	4508.291662995335	4449.522387339484	1.047568357228996	1.001160435283125	1.2104420082648684	0.9255930718465711	0.9889253226663234	0.8867632596342032	0.7712387540667295	0.8692203183219548	1.0132079963959886	1.0	12.119434769865432	-7.407984138575711	8.568466344411684	0.910385471950541	1.0777012458223039	0.44027896413352374	0.08413497551537925	0.29371819879015026	20.102423214951116	0.024626059918309517	0.03655054520339054	3.908551704533604e-08	7.407984138575711	0.16731577387176289	
QERLS(ph)PEVAPPAHR	ddPTM_K562_Methotrexat_30min_R1	5	QERLSPEVAPPAHR	14	1	Q8TAD8	Q8TAD8	SNIP1	Smad nuclear-interacting protein 1	1	QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR	133.28	0.00017623	1395402000.0	10592.900000000001	8357.5	12602.199999999999	10717.4	9800.099999999999	9125.0	8971.6	9999.699999999999	10342.699999999999	11620.3	True	False	10127.248799580328	9738.434821789453	9957.170439252757	9777.822181836958	11088.98492545808	10888.277105910516	10983.70967796322	9648.004883116088	9861.870134485707	9515.75106699076	1.0642616361319912	1.0234015952320528	1.0463882849766046	1.0275407703502561	1.165329446660781	1.1442372787242112	1.154266184627787	1.0138984106660907	1.0363732788991928	1.0	13.216101815870763														
QES(ph)DPEDDDVKKPALQSSVVATSK	ddPTM_K562_Methotrexat_30min_R1	1	QESDPEDDDVKKPALQSSVVATSK	24	2	Q9H307	Q9H307	PNN	Pinin	1	QES(0.996)DPEDDDVKKPALQS(0.002)S(0.002)VVATSK	64.726	0.0028995	15248000.0	2328.3	1240.4	4906.7	2517.9	1396.8	1212.6	994.55	1946.2	1675.7	3624.3	True	False	2225.9507198277024	1445.3550168049812	3876.8507240229087	2297.1596162919427	1580.5036830113822	1446.9177883426955	1217.6031544226587	1877.7510428833386	1597.7970727525396	2967.9041498149454	0.7500076173169187	0.4869951803851556	1.3062587362414106	0.7740006079492746	0.5325319158672728	0.48752173766558926	0.41025689946846117	0.6326858780127451	0.5383587178353335	1.0	11.53522878470046	-7.670071137291834	5.307913377912645	0.5672829914755321	0.8458119299198843	0.1748323341082464	0.23999965990918734	0.3205226396149515	14.550225441112339	0.07128188306936209	0.0920792453659336	2.1376119207018956e-08	7.670071137291834	0.2785289384443522	
QESTVSFNPY(ph)EPELAPWAADKGPQR	ddPTM_K562_Methotrexat_30min_R1	1	QESTVSFNPYEPELAPWAADKGPQR	25	1	P43405-2;P43405	P43405-2	SYK	Tyrosine-protein kinase SYK	1	QESTVS(0.002)FNPY(0.998)EPELAPWAADKGPQR	109.03	3.5793e-07	6672600.0	1024.8	1028.0	3186.3	1159.1	1019.7	843.35	783.72	1431.4	1413.1	1428.8	True	False	979.7510190608729	1197.8595269876828	2517.539173365846	1057.483502618845	1153.8084232293145	1006.3154517555756	959.4891601067072	1381.056850674756	1347.4052894352296	1170.0304746449233	0.8373722225980518	1.0237848953047184	2.1516868388661927	0.9038085122866277	0.986135359918269	0.8600762745611124	0.8200548454927121	1.180359726180529	1.151598457163379	1.0	10.192330391433616														
QEYDESGPSIVHR	ddPTM_K562_Methotrexat_30min_R1	2	QEYDESGPSIVHR	13	0	P60709;P63261;A5A3E0;Q6S8J3;Q9BYX7;P0CG38;A0A2R8YFE2;P0CG39	P60709	ACTB;ACTG1;POTEF;POTEE;POTEKP;POTEI;POTEJ	Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member F;POTE ankyrin domain family member E;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;POTE ankyrin domain family member I;POTE ankyrin domain family member J	0	;	201.3	3.9527e-11	109473000.0	10159.2	9011.1	11692.400000000001	10260.4	9967.3	8497.0	8593.0	11273.3	11254.8	11383.7	False	True	9712.613732282613	10500.031112489007	9238.325026100123	9360.886662298682	11278.174656127832	10138.924993854422	10520.198990451865	10876.811649232728	10731.566804568405	9322.001619691639	1.0419021717144794	1.1263708740737524	0.9910237525152583	1.0041713190142452	1.2098447432474166	1.087633901761734	1.128534344837398	1.1667892897869419	1.1512084252269625	1.0	13.186424048206279	-7.744322833251337	24.998993958963677	1.130749501873413	1.0434142139489242	0.2994707125551487	0.06172654999772828	294.5309350190606	430165.67464464804	0.017750716820505084	0.022857715593600506	1.801677963785124e-08	7.744322833251337	-0.08733528792448886	
QEYDESGPSIVHRK	ddPTM_K562_Methotrexat_30min_R1	4	QEYDESGPSIVHRK	14	1	P60709;P63261;A5A3E0;Q6S8J3;Q9BYX7;P0CG38;A0A2R8YFE2;P0CG39	P60709	ACTB;ACTG1;POTEF;POTEE;POTEKP;POTEI;POTEJ	Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member F;POTE ankyrin domain family member E;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;POTE ankyrin domain family member I;POTE ankyrin domain family member J	0	;;;	90.412	0.0052355	147819000.0	27734.699999999997	20487.8	38218.7	28899.2	21666.699999999997	19986.0	19188.2	24047.6	26484.9	33352.9	False	True	26515.51579659208	23873.060716943794	30197.117159437978	26365.65200490255	24516.250822381662	23848.011642600268	23491.642298218132	23201.832277690566	25253.622779819634	27312.366613791048	0.9708245415541322	0.8740751416572368	1.1056206730979625	0.9653375109423704	0.8976245511438938	0.8731580085981456	0.8601100970267553	0.8494991520059298	0.9246222832651977	1.0	14.737266708447644	-7.741871088817431	4.6584633226316425	0.8892940106173741	0.9818760232093132	0.24507443209319213	0.06583626596769966	0.24800605274535975	13.147074102614823	0.020033435867200865	0.024958751240940494	1.8118778306328903e-08	7.741871088817431	0.0925820125919391	
QFCQEGQPHVLEALS(ph)PPQTSGLSPSR	ddPTM_K562_Methotrexat_30min_R1	1	QFCQEGQPHVLEALSPPQTSGLSPSR	26	0	E9PR76;E9PSH4;Q9H063	E9PR76	MAF1	Repressor of RNA polymerase III transcription MAF1 homolog	1	QFCQEGQPHVLEALS(0.39)PPQT(0.221)S(0.221)GLS(0.154)PS(0.014)R	101.3	1.9797000000000002e-07	0.0	599.6	440.04	654.49	617.64	509.88	552.96	514.01	663.56	562.38	657.45	True	False	573.2423019407682	512.7491305988907	517.1214931350504	563.492460147963	576.9381571404953	659.8116940804692	629.2898269617318	640.2222186906118	536.2350765498436	538.3794341792444	1.064755199675619	0.9523936057858025	0.9605149459755988	1.046645589289649	1.0716199774979023	1.2255514460472425	1.1688593341628652	1.1891654436366539	0.9960170142221909	1.0	9.072479490558203	-7.744882835173703	2.4465528848614486	1.1310688309350836	0.9913392792723015	0.3032801720465419	0.07689968990169521	0.29505982501368094	3.6188888765042	0.02502232520040881	0.03209518142118133	1.799356283559336e-08	7.744882835173703	-0.13972955166278211	
QFCQEGQPHVLEALSPPQTSGLS(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	1	QFCQEGQPHVLEALSPPQTSGLSPSR	26	0	E9PR76;E9PSH4;Q9H063	E9PR76	MAF1	Repressor of RNA polymerase III transcription MAF1 homolog	1	QFCQEGQPHVLEALS(0.128)PPQT(0.133)S(0.133)GLS(0.418)PS(0.186)R	101.59	3.0805e-07	33358000.0	861.45	779.36	647.98	1007.7	795.4	895.59	764.6	1110.8	949.01	1083.9	True	False	823.5816894711047	908.1359931450583	511.97785317063676	919.3565055551812	900.0090417148151	1068.6500924145093	936.0810133945647	1071.7325343925659	904.8907322389967	887.5952067942551	0.9278798298670976	1.023142065429793	0.5768145763424717	1.0357835401969318	1.0139859192856564	1.2039836225278566	1.054626034738771	1.2074564240419494	1.0194858256470405	1.0	9.793758066465992	-7.50185381381128	24.672484417665917	1.0915659026156	0.8516041086981608	0.4239593197227217	0.1256120852899283	605.657594644634	710731.6886688997	0.03492278220446745	0.051150686359233546	3.148808043853469e-08	7.50185381381128	-0.2399617939174391	
QFKIFS(ph)DFR	ddPTM_K562_Methotrexat_30min_R1	1	QFKIFSDFR	9	1	Q0VDD8-4;M9MMK7;Q0VDD8-2	Q0VDD8-4	DNAH14	Dynein heavy chain 14, axonemal	1	QFKIFS(1)DFR	116.37	0.003073	34713000.0	1919.0	1635.3	2040.6	2235.1	1882.3	1765.0	1598.5	2414.0	2690.8	3038.5	True	False	1834.643057745721	1905.5055296526823	1612.3059464489672	2039.152253216618	2129.8554428209663	2106.061270348718	1957.0043158660903	2329.098251731776	2565.705295316902	2488.1982063330047	0.7373379874144094	0.7658174195298256	0.6479813152928486	0.8195296693111235	0.8559830311749369	0.8464202188508676	0.7865146397441689	0.9360581668308077	1.0311498854016632	1.0	11.280885697744814	-8.936451164458582	0.5265185317696682	1.0284188440413968	0.7230169325647358	0.7524588168843048	0.05624210905979158	0.4680746950262285	0.27811424773882615	0.05837606719541068	0.044478684684026354	1.1575741916647643e-09	8.936451164458582	-0.30540191147666107	
QFS(ph)RIEEVFK	ddPTM_K562_Methotrexat_30min_R1	1	QFSRIEEVFK	10	1	A0A1B0GVK0;Q14314	A0A1B0GVK0	FGL2	Fibroleukin	1	QFS(1)RIEEVFK	75.73899999999999	0.02868	8608800.0	2345.9	2498.4	3693.0	3102.2	2765.4	2500.6	2664.9	3271.1	3441.1	3194.1	True	False	2242.7770449013474	2911.2181344611136	2917.8897678310473	2830.234942476217	3129.098571735164	2983.80555956601	3262.571661777631	3156.0535589228693	3281.1240120837647	2615.617538538179	0.8574560354702296	1.1130136923948524	1.1155643838746405	1.0820522881407133	1.19631349982611	1.1407652363554668	1.247342783762271	1.206618900669526	1.2544356977807716	1.0	11.35293588681565	-5.474547157623171	0.8915846992441804	1.1771668957467658	1.6023944884910441e-13	0.584595813969141	0.07429215770984778	5.251719379384147	1.1801423656446959	0.024355100228853545	8.404427891936766	3.3531489249384042e-06	5.474547157623171	-1.1771668957466055	
QGAIYHGLATLLNQPS(ph)PMMQR	ddPTM_K562_Methotrexat_30min_R1	2	QGAIYHGLATLLNQPSPMMQR	21	0	A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6	A8MQ02	MLLT4	Afadin	1	QGAIYHGLATLLNQPS(1)PMMQR;QGAIYHGLATLLNQPS(1)PMMQR	122.83	9.6286e-07	424460000.0	7370.1	5015.6	5385.8	6623.8	5989.6	5597.5	6075.7	8160.8	8069.5	9914.3	True	False	7046.119228708569	5844.342649376867	4255.3941813117945	6043.1017381129395	6777.337385284202	6679.137654831135	7438.330385929062	7873.780038414529	7694.350706317734	8118.724198468756	0.8678850342074081	0.719859734917359	0.5241456757595472	0.7443413017100282	0.8347786203357483	0.8226831570520481	0.9161944911654936	0.9698297227413607	0.9477290419311125	1.0	12.987037320304937	-8.430873599011427	1.0531495647688205	0.9740895105380243	0.7036380211770665	0.6290143304694811	0.08263023563964883	0.35337608175893576	0.8117175015954303	0.05304855806302662	0.04085996073459758	3.7078862374946187e-09	8.430873599011427	-0.27045148936095775	
QGGYSQSNYNS(ph)PGSGQNYSGPPSSYQSSQGGYGR	ddPTM_K562_Methotrexat_30min_R1	3	QGGYSQSNYNSPGSGQNYSGPPSSYQSSQGGYGR	34	0	Q12906;Q12906-7;K7ELV3	Q12906	ILF3	Interleukin enhancer-binding factor 3	1	QGGYSQS(0.001)NY(0.011)NS(0.434)PGS(0.434)GQNY(0.108)S(0.013)GPPSSYQSSQGGYGR;QGGYSQS(0.003)NY(0.002)NS(0.969)PGS(0.026)GQNY(0.001)SGPPSSYQSSQGGYGR;QGGYSQSNYNS(0.895)PGS(0.104)GQNYSGPPSSYQSSQGGYGR	178.04	1.1529999999999997e-98	34072000.0	3571.3999999999996	3072.92	3800.3	3560.0	3195.9	3083.08	3063.66	3397.3900000000003	3803.4	3629.7	True	False	3414.405532273612	3580.667799290843	3002.668964172306	3247.9003272565706	3616.216867508646	3678.841575856501	3750.7637424750087	3277.901868041016	3626.5807641624465	2972.326157487876	1.1487317849261094	1.2046685355409044	1.0102084377947522	1.0927133010199668	1.2166285514793462	1.237697810043078	1.261895076025252	1.1028069243960104	1.2201153480503388	1.0	11.537376718160582														
QGGYSQSNYNSPGS(ph)GQNYSGPPSSYQSSQGGYGR	ddPTM_K562_Methotrexat_30min_R1	1	QGGYSQSNYNSPGSGQNYSGPPSSYQSSQGGYGR	34	0	Q12906;Q12906-7;K7ELV3	Q12906	ILF3	Interleukin enhancer-binding factor 3	1	QGGYSQS(0.002)NY(0.011)NS(0.243)PGS(0.68)GQNY(0.046)S(0.017)GPPSSYQSSQGGYGR	108.78	5.2308e-15	21276000.0	528.26	437.71	621.16	590.83	616.4	344.5	488.45	608.57	478.39	507.88	True	False	505.0383229206638	510.03413770211876	490.7870046536509	539.0328512227527	697.467404215504	411.0697493683477	597.9973463151649	587.1662481592406	456.14975331747155	415.8980105421779	1.2143321442251667	1.2263442593467135	1.1800657666379442	1.2960697997089534	1.6770154858549655	0.9883907567445781	1.4378461333238803	1.411803454875372	1.0967827249830318	1.0	8.700085973610163	-9.932708126902982	5.3452373553023005	1.0015991892269296	1.3026030807712892	0.26720835045100033	0.17269521989739292	0.23506260766847495	11.645043208026028	0.16408621921688593	0.04272380233271108	1.1675940497796322e-10	9.932708126902982	0.3010038915443596	
QGLAETAS(ph)PVAVSLR	ddPTM_K562_Methotrexat_30min_R1	1	QGLAETASPVAVSLR	15	0	A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154-4;Q15154-2;Q15154	A0A5H1ZRS1	PCM1	Pericentriolar material 1 protein	1	QGLAET(0.02)AS(0.659)PVAVS(0.32)LR	156.08	1.5211e-08	62313000.0	1108.6	1295.6	1686.5	1536.5	1064.1	1078.5	1220.0	1199.6	1258.1	1479.0	True	False	1059.8672714001589	1509.6758785654094	1332.526697386152	1401.7974305701457	1204.0478014693672	1286.9048612300803	1493.6160559003	1157.409388060248	1199.611205603611	1211.1387681969773	0.8750997814874539	1.2464929025539035	1.1002262766056816	1.1574209887253482	0.9941452070449645	1.0625577308089114	1.2332328013278335	0.9556373047023206	0.9904820464045361	1.0	10.242148458298823	-9.318261022299437	24.99775400001668	0.979794625110827	1.0987838485525507	0.20184981993109719	0.10331365730330158	446.69058364686043	196511.58382009674	0.05402625491716794	0.02595337749313715	4.805504383027021e-10	9.318261022299437	0.11898922344172369	
QGLAETASPVAVS(ph)LR	ddPTM_K562_Methotrexat_30min_R1	1	QGLAETASPVAVSLR	15	0	A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154-4;Q15154-2;Q15154	A0A5H1ZRS1	PCM1	Pericentriolar material 1 protein	1	QGLAET(0.012)AS(0.203)PVAVS(0.785)LR	95.755	0.0051863	67273000.0	1523.1	1586.2	1902.6	1747.6	1687.1	1423.5	1381.0	1479.0	1599.7	1857.0	True	False	1456.1463477084455	1848.292589209981	1503.270260567384	1594.390621324039	1908.9832213692039	1698.571228522041	1690.7244042609125	1426.98273169482	1525.3302961641327	1520.6793053020876	0.9575630723922935	1.2154387731625058	0.9885517974276337	1.0484726238891693	1.2553489843080219	1.1169818794795887	1.1118218011949896	0.9383850537844634	1.003058495532772	1.0	10.570500221135177	-9.252229742413954	24.440606088089798	0.9780413303792382	1.104128115745018	0.27861882470607735	0.08723509752211389	587.6354203896032	1559477.965063925	0.04135060368537084	0.023434697156715277	5.594615672162031e-10	9.252229742413954	0.12608678536577977	
QGLAETASPVAVS(ph)LRSDGSENLCTPQQSR	ddPTM_K562_Methotrexat_30min_R1	1	QGLAETASPVAVSLRSDGSENLCTPQQSR	29	1	A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154-4;Q15154-2;Q15154	A0A5H1ZRS1	PCM1	Pericentriolar material 1 protein	1	QGLAET(0.117)AS(0.249)PVAVS(0.436)LRS(0.139)DGS(0.023)ENLCT(0.016)PQQS(0.019)R	42.909	0.033025	10893000.0	298.99	293.52	587.99	376.31	247.51	288.68	263.83	363.62	303.14	286.93	True	False	285.8467576005176	342.01919101305873	464.5789343587805	343.31948655896633	280.06190333773435	344.46332437635584	323.00059346571834	350.83127849822216	289.04708756591566	234.96419659145266	1.2165545293589461	1.4556225840984167	1.9772328767457865	1.4611565997687639	1.191934377239167	1.4660247364209975	1.3746800497751588	1.4931265426291098	1.2301750298940242	1.0	7.876297128117413	-10.711534946287466	0.38612647628458163	0.9330103900972975	1.5114786393683959	0.3201201534724927	0.20493081025207105	4.0969334639407515	1.0245216757077769	0.6836002702498332	0.17097604363952001	1.9429653413333503e-11	10.711534946287466	0.5784682492710984	
QGMMMS(ph)IAT(ph)KIAMQMT(ph)CK	ddPTM_K562_Methotrexat_30min_R1	1	QGMMMSIATKIAMQMTCK	18	1	Q7Z3Z4	Q7Z3Z4	PIWIL4	Piwi-like protein 4	3	QGMMMS(1)IAT(1)KIAMQMT(1)CK	46.558	0.031981	0.0	289.72	345.86	331.82	398.31	177.98	168.93	334.74	226.73	237.13	261.59	True	False	276.98425570093303	403.0074863851747	262.1755165885995	363.3907807161696	201.38748962082326	201.57333167139322	409.81396602628377	218.75577738821266	226.10587805801134	214.2135161410731	1.2930288465949153	1.8813354714730925	1.2238981055515676	1.696395200743794	0.9401250362194555	0.9409925914228703	1.9131097486696194	1.021204363426574	1.0555163937886458	1.0	7.7429057018633785	-6.93051672027673	0.19054778998478739	0.9346859535071864	1.9674456596561285	0.1715784136364299	0.3359773921521188	21.749707113242472	1.0003720460851042	0.9529955923001071	5.54482175991469	1.173500502016597e-07	6.93051672027673	1.032759706148942	
QGPVSQSATQQPVT(ph)ADKQQGHEPVSPR	ddPTM_K562_Methotrexat_30min_R1	1	QGPVSQSATQQPVTADKQQGHEPVSPR	27	1	A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9	A0A0A0MRT2	WAC	WW domain-containing adapter protein with coiled-coil	1	QGPVSQS(0.005)AT(0.153)QQPVT(0.469)ADKQQGHEPVS(0.372)PR	58.938	0.0029636999999999997	63876000.0	2773.5	1866.8	3412.5	2925.6	2246.6	1813.1	1791.8	2242.4	2903.9	3443.9	True	False	2651.5802608951303	2175.2569698254897	2696.2628845717445	2669.1171902870274	2542.0672782455417	2163.4559146001475	2193.656761444391	2163.53352099558	2768.898322829922	2820.1763379266877	0.9402178953265368	0.7713194882787634	0.9560618066010579	0.9464362757717787	0.9013859325244875	0.7671349785845867	0.7778438291050638	0.7671624968622166	0.9818174436799708	1.0	11.461569657888518	-8.109441556573358	20.920008768856093	0.8386295778278766	0.9011504934211257	0.03288487350325342	0.0916001204802781	19.223144294431403	3645.8660563143726	0.02994774580441345	0.02994781157783657	7.772459064863878e-09	8.109441556573358	0.06252091559324913	
QGPVSQSATQQPVTADKQQGHEPVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	QGPVSQSATQQPVTADKQQGHEPVSPR	27	1	A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9	A0A0A0MRT2	WAC	WW domain-containing adapter protein with coiled-coil	1	QGPVSQSAT(0.001)QQPVT(0.017)ADKQQGHEPVS(0.981)PR;QGPVSQSATQQPVT(0.001)ADKQQGHEPVS(0.999)PR;QGPVSQSATQQPVTADKQQGHEPVS(1)PR;QGPVSQSATQQPVTADKQQGHEPVS(1)PR	137.05	1.2e-21	516217000.0	8678.4	6390.06	12368.1	9302.699999999999	6298.54	6151.900000000001	6074.87	7453.799999999999	7502.13	10059.4	True	False	8296.907927222755	7445.908802551469	9772.20483008697	8487.146734373504	7126.908410362629	7340.667608531609	7437.314237300867	7191.645629145939	7153.357613778728	8237.545182421003	1.0072063634841644	0.9038989938945776	1.1863006045710007	1.030300477438977	0.8651738172643371	0.891123198231029	0.9028556533045989	0.8730326171069722	0.8683846285959145	1.0	13.0079987578967	-7.753330668692836	24.670797249481403	0.8934360591780388	1.0338085404730302	0.43349568239747494	0.07358185049270946	142.8471115981697	434610.42890585324	0.022006302140889326	0.02789662416065863	1.7646936839728875e-08	7.753330668692836	0.14037248129499136	
QGS(ph)FTIEKPSPNIPIELIPHINK	ddPTM_K562_Methotrexat_30min_R1	1	QGSFTIEKPSPNIPIELIPHINK	23	1	Q5SW79-2;H0Y2V6;Q5SW79-3;Q5SW79	Q5SW79-2	CEP170	Centrosomal protein of 170 kDa	1	QGS(0.687)FT(0.294)IEKPS(0.019)PNIPIELIPHINK	66.972	0.004807100000000001	12608000.0	2638.4	1534.5	4853.7	2868.6	1891.4	1680.6	1464.8	1947.1	2238.0	3958.3	True	False	2522.4190951309574	1788.0500429597264	3834.9746997350553	2617.1142917888187	2140.1522523251197	2005.3521648430913	1793.3186874448854	1878.6193893732134	2133.9558684849208	3241.413513288774	0.7781849137081196	0.5516266393131529	1.1831180082432764	0.8073990810057016	0.6602527704506598	0.6186659482419565	0.5532520550348926	0.5795679513494547	0.6583411402884495	1.0	11.66240736440961	-5.917702503043594	20.293220987876396	0.7226099508693475	3.3805726155450846	0.0009873957105521747	0.19834408650068944	4795.284434212123	1215661.1689277475	0.04968126704888307	16381.317604922142	1.2086414855893945e-06	5.917702503043594	2.657962664675737	
QGS(ph)LAMEELK	ddPTM_K562_Methotrexat_30min_R1	2	QGSLAMEELK	10	0	P16150	P16150	SPN	Leukosialin	1	QGS(1)LAMEELK;QGS(1)LAMEELK	124.07	0.0029192	48703000.0	8422.2	5531.4	10046.6	8903.2	5164.84	5309.1	5177.2	8726.7	8268.5	12343.1	True	False	8051.970172457533	6445.369832275938	7937.955954912371	8122.670279109747	5844.106988949395	6335.008436492	6338.318889022159	8419.777014659358	7884.0992397531645	10107.644982915559	0.7966217834191219	0.6376727559357517	0.7853417851863116	0.8036164994753067	0.5781868079881508	0.6267541496757895	0.6270816693438975	0.8330107585783711	0.7800134703068082	1.0	13.303159277161843	-10.08523002512623	1.2581410176340873	0.9952234574004716	0.6964167512874774	0.5371818137968072	0.0830209511439884	0.44693835224484674	1.5427865881683487	0.08236905171037989	0.025329930067996304	8.218072624444175e-11	10.08523002512623	-0.2988067061129942	
QGS(ph)LHVGDEILEINGTNVTNHSVDQLQK	ddPTM_K562_Methotrexat_30min_R1	1	QGSLHVGDEILEINGTNVTNHSVDQLQK	28	0	A6NFY0;Q00013-3;Q00013;A8MTH1;Q00013-2	A6NFY0	MPP1	55 kDa erythrocyte membrane protein	1	QGS(0.991)LHVGDEILEINGT(0.005)NVT(0.003)NHS(0.001)VDQLQK	77.613	0.00021269	10506000.0	657.97	488.56	1419.6	624.28	670.34	709.49	630.18	822.8	751.96	1306.8	True	False	629.0464266310329	569.2862358999047	1121.6453599818446	569.5503416572279	758.5014596720005	846.5889012462958	771.5139066452876	793.8616576325206	717.0015437291873	1070.1258568490941	0.5878247148267338	0.5319806378439688	1.0481434055658143	0.532227436625283	0.7087964979234793	0.791111527516038	0.7209562330518327	0.7418395252778838	0.6700160912290681	1.0	10.063564765750456	-15.999999999999895	0.24816888956919333	2.729369780695448	0.6819643746752692	0.2834900366536637	0.14178059984097377	243.80745740794097	2.4229878575912513	213.93979430153618	0.20627371595326877	1.0000000000002413e-16	15.999999999999895	-2.0474054060201787	
QGS(ph)PGSVSK	ddPTM_K562_Methotrexat_30min_R1	1	QGSPGSVSK	9	0	O00425	O00425	IGF2BP3	Insulin-like growth factor 2 mRNA-binding protein 3	1	QGS(0.832)PGS(0.167)VS(0.002)K	82.774	0.026523	20335000.0	5428.5	3683.5	8490.1	6480.7	3935.5	3821.5	3483.4	5008.8	5297.6	5992.7	True	False	5189.86963990237	4292.135766205378	6708.144034081337	5912.547092935859	4453.08723116502	4559.950790162964	4264.641122232056	4832.637664985133	5051.315732299248	4907.363959549713	1.0575677049188295	0.8746316355551531	1.3669546602565135	1.2048315840584969	0.9074295829432678	0.9292057462518784	0.8690289037830746	0.9847726202538608	1.0293338284945026	1.0	12.260732558954988	-7.769353974308978	24.999971528253262	0.9471159496614409	1.1252530798075937	0.320729110968187	0.12292792661684739	226.5332254809224	715552.7847122822	0.0404932379553875	0.04673722828135588	1.7007717191778237e-08	7.769353974308978	0.17813713014615284	
QGS(ph)PVAAGAPAKQQQVDIPLR	ddPTM_K562_Methotrexat_30min_R1	2	QGSPVAAGAPAKQQQVDIPLR	21	1	Q9NZI8	Q9NZI8	IGF2BP1	Insulin-like growth factor 2 mRNA-binding protein 1	1	QGS(1)PVAAGAPAKQQQVDIPLR;QGS(1)PVAAGAPAKQQQVDIPLR	89.65899999999999	0.00064434	147138000.0	5172.2	3955.6	7375.0	9109.599999999999	3095.6	3257.9	4174.3	3333.2	3747.5	7211.200000000001	True	False	4944.836281017415	4609.195666296182	5827.088285338197	8310.975511566416	3502.725659457358	3887.443066668038	5110.493034544773	3215.9694667242547	3573.279542961234	5905.181802043299	0.8373724038955773	0.7805340835910111	0.9867754254952692	1.4074038344917117	0.5931613584268229	0.6583104800131493	0.8654251817914311	0.544601262845366	0.6051091503609278	1.0	12.527765761027752														
QGSITS(ph)PQANEQSVT(ph)PQRR	ddPTM_K562_Methotrexat_30min_R1	2	QGSITSPQANEQSVTPQRR	19	1	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	QGSIT(0.103)S(0.862)PQANEQS(0.344)VT(0.691)PQRR;QGS(0.002)IT(0.038)S(0.96)PQANEQS(0.045)VT(0.956)PQRR	114.03	0.002241	56277000.0	5876.1	5363.4	7869.7	5649.2	5602.7	5256.6	4956.200000000001	6366.5	6409.5	6248.2	True	False	5617.793679843471	6249.610687787677	6217.9575158137	5153.943406948827	6339.553253728433	6272.363554512794	6067.754013322184	6142.586586433451	6111.5237439920065	5116.590433704092	1.09795649126767	1.2214404824392695	1.215254102586493	1.0073003641250398	1.239019095991819	1.2258873630367937	1.1858979318243983	1.2005234083171676	1.1944524040333722	1.0	12.320967039621852	-12.209032406212831	5.452137516519947	0.9999913219597075	1.1781916964466879	0.3798506010877799	0.06758917533775384	7.099886956300976e-06	1.0300822873204515e-06	0.06516948174722083	0.015805151478441564	6.179702866724618e-13	12.209032406212831	0.17820037448698034	
QGSITSPQANEQSVT(ph)PQRR	ddPTM_K562_Methotrexat_30min_R1	4	QGSITSPQANEQSVTPQRR	19	1	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	QGSITSPQANEQS(0.043)VT(0.957)PQRR;QGSITSPQANEQS(0.002)VT(0.998)PQRR;QGSITSPQANEQS(0.122)VT(0.878)PQRR;QGSITSPQANEQS(0.043)VT(0.957)PQRR	160.98	4.2404e-13	452470000.0	5394.1	4814.55	6902.1	5659.4	5143.5	4935.299999999999	4688.93	6426.1	5992.299999999999	6567.8	True	False	5156.98182271297	5610.072554142551	5453.443532777325	5163.249188785348	5819.960404903381	5888.976876800016	5740.541912289015	6200.090420651849	5713.719280930382	5378.307776716774	0.9588484030307923	1.0430925092143497	1.0139701480800003	0.9600137074969127	1.08211739575384	1.0949497725462976	1.0673509495199194	1.1527957636587205	1.0623637616399786	1.0	12.392936601278205	-7.780267797269316	24.34030912565954	1.0846915127589036	0.9989169392942546	0.4686071478797964	0.04244873809795968	145.6726307868234	188316.21072680314	0.012664807416052989	0.01438680240909701	1.6585638784462783e-08	7.780267797269316	-0.085774573464649	
QHDYS(ph)DYEDSSLEFLER	ddPTM_K562_Methotrexat_30min_R1	3	QHDYSDYEDSSLEFLER	17	0	A0A0A0MQS0;F8W9L8;A8MW92	A0A0A0MQS0	PHF20L1	PHD finger protein 20-like protein 1	1	QHDY(0.041)S(0.959)DYEDSSLEFLER;QHDY(0.41)S(0.523)DY(0.067)EDSSLEFLER;QHDY(0.138)S(0.862)DYEDSSLEFLER	96.579	0.0016808	15797000.0	4147.16	3085.15	4559.6	4475.27	3389.25	3495.17	3626.98	4046.58	4054.42	4744.7	True	False	3964.8558120691714	3594.918598916389	3602.602270620756	4082.9300274049174	3834.995781533741	4170.562136138658	4440.42259215514	3904.25948777662	3865.930899152206	3885.388852916969	1.0204527686057838	0.9252403646079057	0.9272179457446299	1.050842060335774	0.9870301086221023	1.0733963302045288	1.1428515292160468	1.0048568201469679	0.9949920189455028	1.0	11.9238432766288	-7.268314107274498	24.928875866813954	1.0404183937603206	0.9543973591610089	0.3352572530589236	0.05045101651595508	565.1192920195475	2049212.2688892572	0.014872562928216333	0.022610310288255185	5.391205578244701e-08	7.268314107274498	-0.08602103459931176	
QHEAPSNRPLNELLTPQGPS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	QHEAPSNRPLNELLTPQGPSPR	22	1	P10398;Q96II5	P10398	ARAF	Serine/threonine-protein kinase A-Raf	1	QHEAPSNRPLNELLT(0.004)PQGPS(0.996)PR;QHEAPSNRPLNELLT(0.001)PQGPS(0.999)PR;QHEAPSNRPLNELLTPQGPS(1)PR;QHEAPSNRPLNELLT(0.042)PQGPS(0.958)PR	112.48	1.2445e-05	400378000.0	3926.51	3485.59	4241.38	3991.9	2987.29	3370.0199999999995	3223.88	4631.14	3814.51	4595.08	True	False	3753.9053218703216	4061.524502600188	3351.1722998871523	3641.93632482458	3380.1709960073567	4021.2286698586877	3946.9171559802153	4468.260181244858	3637.1742626874075	3762.8664847644113	0.9976185275426666	1.079369815284444	0.8905902756464572	0.9678622240705406	0.8982968196435982	1.0686610024938081	1.0489123576297519	1.187461792581942	0.9665966829846546	1.0	11.877616384807833	-8.292831076720216	23.871011168599523	1.065704390013998	0.9688352936005709	0.25736327263881065	0.07307547313648735	504.8205549382067	383875.54382253	0.025611567995999483	0.022590028659846547	5.095290190411993e-09	8.292831076720216	-0.09686909641342711	
QHFISFDTDR	ddPTM_K562_Methotrexat_30min_R1	2	QHFISFDTDR	10	0	C9J0K6;P30626-3;P30626-2;P30626	C9J0K6	SRI	Sorcin	0	;	95.48299999999999	0.014379	12604800.0	1056.0500000000002	823.98	1240.7399999999998	1361.54	1042.63	757.0799999999999	928.0	1119.5	1372.47	1315.25	False	True	1009.6273064785665	960.1286897347379	980.3256297153243	1242.1759021272226	1179.7541201447295	903.3749952156415	1136.1276228487534	1080.12655046136	1308.6641692669793	1077.04547996692	0.9374045249320166	0.891446747229492	0.9101989172689658	1.1533179658907016	1.0953614699547916	0.8387528772168353	1.0548557549154265	1.0028606688870136	1.215050054624595	1.0	10.072863455934545	-7.220458170605588	23.67359548942057	1.0446844592657298	0.9108595884053533	0.305504703521723	0.09525385449673869	364.0545958677063	210302.09820190634	0.02641029963851631	0.04574303014582536	6.019242348858414e-08	7.220458170605588	-0.13382487086037653	
QHYIDLK	ddPTM_K562_Methotrexat_30min_R1	2	QHYIDLK	7	0	F6XY72;J3KPD9;Q32Q12;P22392;P22392-2;O60361	F6XY72	NME2;NME1-NME2;NME2P1	Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase	0	;	89.296	0.029133999999999997	5275900.0	14826.900000000001	10493.3	16829.8	13419.2	11330.0	9059.6	9178.2	14546.300000000001	15909.7	17976.1	False	True	14175.127229228772	12227.139469396734	13297.454972825068	12242.759570652073	12820.093591436835	10810.239481502123	11236.64498710175	14034.69838407867	15170.061519586483	14720.454098029539	0.9629544805364555	0.8306224378657886	0.9033318458976783	0.8316835533144914	0.8709034046139186	0.7343686145490015	0.7633354862745623	0.953414771760155	1.0305430402189242	1.0	13.845534556030687	-9.468544446543483	5.2833185642492335	1.0095368525952788	0.841179515357062	0.5738967775519574	0.061545322369414734	0.1488103911934066	9.096899044684127	0.038355684642904134	0.01709390046744284	3.399817096329434e-10	9.468544446543483	-0.16835733723821678	
QHYQKETESAPGS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	3	QHYQKETESAPGSPR	15	1	Q6PKG0;A0A0B4J210;Q6PKG0-3;E5RH50;H0YBW1	Q6PKG0	LARP1	La-related protein 1	1	QHYQKETESAPGS(1)PR;QHYQKETESAPGS(1)PR;QHYQKETESAPGS(1)PR	99.37100000000001	0.0024571	72750500.0	11462.4	10266.5	19669.8	17448.7	9455.8	9207.4	10359.3	8955.6	10472.3	15053.599999999999	True	False	10958.526620690223	11962.864624337586	15541.37778372141	15918.999561854424	10699.403440592092	10986.599739721692	12682.636727777026	8640.6264719176	9985.445058773299	12327.247167633543	0.8889678670078883	0.9704408828393836	1.2607338501759662	1.2913669487905943	0.8679475064541967	0.8912451896452714	1.0288295963657317	0.7009372290842398	0.8100304084914525	1.0	13.58956304295495	-7.7979063937522035	24.968731427603284	0.8758988999424375	1.1046931510265057	0.36871574638275484	0.14063953185968558	192.4085902718699	131739.85247760286	0.04710726150691824	0.053416180880466915	1.5925519428963073e-08	7.7979063937522035	0.22879425108406815	
QIAERPAEETGPQEEEGETAGEAPVS(ph)HHAATERTSPVSLWSR	ddPTM_K562_Methotrexat_30min_R1	1	QIAERPAEETGPQEEEGETAGEAPVSHHAATERTSPVSLWSR	42	2	P11277	P11277	SPTB	Spectrin beta chain, erythrocytic	1	QIAERPAEETGPQEEEGET(0.006)AGEAPVS(0.247)HHAAT(0.208)ERT(0.061)S(0.061)PVS(0.177)LWS(0.239)R	58.635	0.00012727	175120000.0	966.98	836.81	1042.7	1205.2	753.05	836.55	969.99	884.41	1074.9	1225.3	True	False	924.4727170291591	975.0786291620249	823.8515193385954	1099.5419871937129	852.0892744070169	998.2014479944596	1187.5349492317469	853.3047990116403	1024.9281336168199	1003.3862966002407	0.921352743366674	0.9717878672111326	0.821071128966022	1.0958311778018845	0.8492135853301352	0.994832649575394	1.183527175182135	0.8504250076993084	1.0214691361538115	1.0	9.970661424905163	-8.502868818376196	24.591524715253374	1.0139320427619565	0.9355252896355063	0.13031196953967228	0.10174047750222216	1374.118984666624	1688751.0031162929	0.03514623283701093	0.03057042982985496	3.141457449326053e-09	8.502868818376196	-0.07840675312645018	
QIAERPAEETGPQEEEGETAGEAPVSHHAAT(ph)ERTSPVSLWSR	ddPTM_K562_Methotrexat_30min_R1	1	QIAERPAEETGPQEEEGETAGEAPVSHHAATERTSPVSLWSR	42	2	P11277	P11277	SPTB	Spectrin beta chain, erythrocytic	1	QIAERPAEETGPQEEEGET(0.005)AGEAPVS(0.14)HHAAT(0.275)ERT(0.275)S(0.216)PVS(0.087)LWS(0.002)R	63.534	6.6912e-05	28935000.0	251.61	326.49	420.16	297.35	230.29	334.29	314.52	272.77	240.3	365.83	True	False	240.54952566930734	380.4369231188796	331.9741578261287	271.28178716565765	260.57717150679497	398.8868113682	385.0591163129202	263.1765244924923	229.1285054499226	299.574642034821	0.8029702515386703	1.2699236508631446	1.1081517299703283	0.9055565762275876	0.8698238600465616	1.3315106000254702	1.285352837935338	0.8785006725031889	0.7648461294774406	1.0	8.226771699556322	-9.430482595034487	11.976975051337924	0.8622096358637924	1.084745735813058	0.20642448951736614	0.17948227978408107	1.1752222876027751	148.26028294588943	0.10153933340198089	0.04873554910190499	3.71122602458007e-10	9.430482595034487	0.2225360999492657	
QIAERPAEETGPQEEEGETAGEAPVSHHAATERTSPVSLWS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	QIAERPAEETGPQEEEGETAGEAPVSHHAATERTSPVSLWSR	42	2	P11277	P11277	SPTB	Spectrin beta chain, erythrocytic	1	QIAERPAEETGPQEEEGETAGEAPVS(0.11)HHAAT(0.11)ERT(0.134)S(0.134)PVS(0.202)LWS(0.309)R	55.527	0.00019066	136540000.0	1210.2	1252.7	1290.4	1692.7	1334.6	1431.4	1293.9	1732.0	1403.3	1802.2	True	False	1157.001057052564	1459.6873827407287	1019.5626743593785	1544.3036190862913	1510.1232927741924	1707.9977917151018	1584.0900120732765	1671.0845782930542	1338.0608892961975	1475.8041163249432	0.7839800988858436	0.9890793544983812	0.6908523042328274	1.04641503706598	1.0232545607303976	1.1573336683518467	1.073374165683985	1.1323213967273649	0.906665643831002	1.0	10.527285529664352	-7.363891397898832	8.255218072637541	1.0594065290904398	0.8384880079581049	0.5404231499378538	0.0952808628853122	0.22419025206997584	16.23940326564585	0.025693577043402298	0.038159462477688914	4.326220013809625e-08	7.363891397898832	-0.2209185211323349	
QIANS(ph)QDGYVWQVTDMNR	ddPTM_K562_Methotrexat_30min_R1	4	QIANSQDGYVWQVTDMNR	18	0	P10155-3;P10155-5;P10155-4;P10155;D6RDN1;D6RE09;P10155-2	P10155-3	TROVE2	60 kDa SS-A/Ro ribonucleoprotein	1	QIANS(1)QDGYVWQVTDMNR;QIANS(0.998)QDGYVWQVT(0.002)DMNR;QIANS(0.999)QDGYVWQVT(0.001)DMNR;QIANS(0.998)QDGY(0.002)VWQVTDMNR	241.13	1.1459999999999999e-69	112682000.0	2487.2	2499.6400000000003	2448.19	3126.6	2053.7200000000003	2084.8900000000003	2621.7799999999997	2590.92	2695.6	2989.0	True	False	2377.8656660891897	2912.6630233847172	1934.3483754958818	2852.4958323596597	2323.820177458573	2487.765485516907	3209.780904129746	2499.7958750525627	2570.282144364592	2447.663135997812	0.971484037618531	1.1899770767260194	0.7902837392316763	1.1653955932121411	0.9494035936898837	1.0163839332828564	1.3113654640311645	1.0212989844427667	1.0500963578539142	1.0	11.25718930287785														
QICLVMLET(ph)LSQSPQGR	ddPTM_K562_Methotrexat_30min_R1	1	QICLVMLETLSQSPQGR	17	0	Q15365	Q15365	PCBP1	Poly(rC)-binding protein 1	1	QICLVMLET(0.414)LS(0.414)QS(0.171)PQGR	167.18	8.4684e-08	11642000.0	1839.2	1182.3	1307.0	1293.5	1247.9	1146.1	1504.8	1916.6	1942.5	2159.4	True	False	1758.350970195899	1377.654979336125	1032.6785612118001	1180.1008632883068	1412.0207231027389	1367.5676045023608	1842.2897056711233	1849.1920916607774	1852.1935989865779	1768.311734986175	0.994367076464403	0.779079249477975	0.5839912390899072	0.6673601944385292	0.7985134607014177	0.7733747265512847	1.041835367159132	1.0457387433869145	1.047436129241691	1.0	10.788156913958277	-8.746991882220255	5.8954396067386075	1.0388310485027292	0.7540839099600711	0.6344707728949768	0.09929627485185807	0.10956102195279616	12.832549438314919	0.04286959233039465	0.03140195588192808	1.790639324135397e-09	8.746991882220255	-0.2847471385426581	
QICLVMLETLS(ph)QSPQGR	ddPTM_K562_Methotrexat_30min_R1	3	QICLVMLETLSQSPQGR	17	0	Q15365	Q15365	PCBP1	Poly(rC)-binding protein 1	1	QICLVMLET(0.023)LS(0.859)QS(0.118)PQGR;QICLVMLET(0.093)LS(0.669)QS(0.239)PQGR;QICLVMLET(0.013)LS(0.968)QS(0.019)PQGR	161.2	6.384300000000001e-09	526565000.0	4666.5	3941.3	4300.6	4303.1	3784.8500000000004	3764.0	3851.6400000000003	5657.9	5905.3	6357.5	True	False	4461.36624750933	4592.53283435462	3397.962831176334	3925.8539039937486	4282.6241155825	4491.339728947634	4715.468316022813	5458.908450071751	5630.763891941024	5206.095144565437	0.8569505788165399	0.8821453905137893	0.6526893452424539	0.7540880054971503	0.8226173353848644	0.8627079613856221	0.9057591505881751	1.0485610228945241	1.0815714533797738	1.0	12.345985962777224	-8.934478473870854	1.4650894015198517	1.0560026726051204	0.7896027204917487	0.7420002654461985	0.06330060045334938	0.22104681033819404	0.931776532293912	0.045225922267403816	0.022866107529437484	1.162844186812332e-09	8.934478473870854	-0.26639995211337164	
QICLVMLETLSQS(ph)PQGR	ddPTM_K562_Methotrexat_30min_R1	8	QICLVMLETLSQSPQGR	17	0	Q15365	Q15365	PCBP1	Poly(rC)-binding protein 1	1	QICLVMLETLSQS(1)PQGR;QICLVMLETLS(0.003)QS(0.996)PQGR;QICLVMLET(0.002)LS(0.006)QS(0.992)PQGR;QICLVMLET(0.026)LS(0.026)QS(0.947)PQGR;QICLVMLET(0.015)LS(0.234)QS(0.751)PQGR;QICLVMLETLS(0.085)QS(0.915)PQGR;QICLVMLET(0.004)LS(0.012)QS(0.984)PQGR;QICLVMLET(0.026)LS(0.239)QS(0.736)PQGR	202.84	3.5077e-16	833917000.0	20974.999999999996	15220.719999999998	16638.69	20052.1	16292.920000000002	14109.64	17395.14	24283.55	22861.5	26697.969999999998	True	False	20052.964114755847	17735.685271996055	13146.456350152379	18294.163525893677	18435.72456114678	16836.128239412516	21296.442949699616	23429.48378245283	21798.673854945497	21862.708924381226	0.9172222977543667	0.8112299959415036	0.6013187293314549	0.8367747834529362	0.8432497832227606	0.770084269870003	0.9740990022489797	1.071664260064513	0.9970710368208617	1.0	14.416184550442107	-8.848575254088098	4.300978674143935	1.025046855723779	0.7921588160374442	0.6430035259763451	0.07852469580575155	0.14099078031039608	4.782174704279009	0.03567224387157686	0.023781114850266086	1.4171791228675139e-09	8.848575254088098	-0.23288803968633487	
QIDSS(ph)PVGGETDETTVSQNYR	ddPTM_K562_Methotrexat_30min_R1	1	QIDSSPVGGETDETTVSQNYR	21	0	F1T0I1;O15027-2;O15027-4;O15027-3;O15027;O15027-5;A0A3F2YNX0;A0A3F2YNZ0	F1T0I1	SEC16A	Protein transport protein Sec16A	1	QIDS(0.036)S(0.964)PVGGETDETTVSQNYR	222.13	5.820499999999999e-42	8520400.0	22440.0	19689.0	24542.0	23257.0	20389.0	20077.0	20017.0	22600.0	22215.0	23195.0	True	False	21453.564468897323	22942.27259422226	19390.969586273914	21218.09491882193	23070.510876946642	23956.596104697568	24506.321795865824	21805.14519019807	21182.229498834924	18994.160735854548	1.1294820954315845	1.2078592422836043	1.0208910967922011	1.1170851512680604	1.2146107005084634	1.2612611021805045	1.2902029279770273	1.147992032574376	1.1151969172741623	1.0	14.213268346936953	-6.002556933459152	16.07622494348105	1.1621967016219872	1.0997629910084288	0.0	0.09041708529395238	2676856.5547894104	86619119.6708417	0.02346054750397152	2962131.66498311	9.941297408323975e-07	6.002556933459152	-0.0624337106135584	
QIIGYVIGTQQATPGPAY(ph)S(ph)GR	ddPTM_K562_Methotrexat_30min_R1	1	QIIGYVIGTQQATPGPAYSGR	21	0	M0QX98;T2HUW8;A0A087WYX0;A0A024R0K5;P06731-2;P06731	M0QX98	CEACAM5	Carcinoembryonic antigen-related cell adhesion molecule 5	2	QIIGY(0.001)VIGT(0.002)QQAT(0.005)PGPAY(0.994)S(0.999)GR	51.166000000000004	0.032397	0.0	832.4	938.53	1228.3	1304.3	926.61	877.4	1157.7	901.49	975.75	1081.3	True	False	795.8086926876177	1093.6061302176554	970.4966157126664	1189.9540440563892	1048.4754565543935	1046.9451323535218	1417.3436950129317	869.7840857306041	930.3875954754974	885.4660919887701	0.8987455306167845	1.2350626863208276	1.0960291133598536	1.3438730797514047	1.1840944176636983	1.1823661479820953	1.6006752916190798	0.9822895462626423	1.0507320425854285	1.0	9.79029325129027														
QILIACS(ph)PVSSVR	ddPTM_K562_Methotrexat_30min_R1	5	QILIACSPVSSVR	13	0	Q5QJE6;J3KP30;E9PRB3	Q5QJE6	DNTTIP2	Deoxynucleotidyltransferase terminal-interacting protein 2	1	QILIACS(0.986)PVS(0.014)S(0.001)VR;QILIACS(0.995)PVS(0.004)S(0.001)VR;QILIACS(0.992)PVS(0.008)SVR;QILIACS(0.995)PVS(0.005)SVR;QILIACS(0.999)PVS(0.001)SVR	150.12	4.805e-09	895727000.0	23508.5	20310.799999999996	24692.300000000003	23577.9	20554.9	20102.0	20446.6	22166.8	22726.8	23907.3	True	False	22475.094488283103	23666.81447542939	19509.723670244948	21510.862114051306	23258.229634830088	23986.427000878157	25032.270531615624	21387.181079738166	21670.23602854473	19577.456303526425	1.1480089210688078	1.2088809755722127	0.9965402740666939	1.0987567424771432	1.1880108056040282	1.2252065145234194	1.2786273223404738	1.0924392192812995	1.1068974279687875	1.0	14.25690570747959	-10.032052512571465	1.837174870986287	1.0028707007054702	1.1583160954319565	0.2912432893022643	0.07459535038902057	0.5416629098401544	4.143299825769423	0.07760123618279362	0.022013253290701633	9.288540679118161e-11	10.032052512571465	0.15544539472648622	
QIMEY(ph)KR	ddPTM_K562_Methotrexat_30min_R1	1	QIMEYKR	7	1	Q8N0V3	Q8N0V3	RBFA	Putative ribosome-binding factor A, mitochondrial	1	QIMEY(1)KR	60.799	0.030705	9865400.0	0.0	0.0	0.0	55.041000000000004	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	50.21564098666541	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
QIPS(ph)AEDLETDGGGPGQVVDDGLEHR	ddPTM_K562_Methotrexat_30min_R1	2	QIPSAEDLETDGGGPGQVVDDGLEHR	26	0	J3KPH8;Q8WUI4-8;Q8WUI4-5;Q8WUI4-6;Q8WUI4-7;Q8WUI4;Q8WUI4-4;Q8WUI4-3;Q8WUI4-10	J3KPH8	HDAC7	Histone deacetylase;Histone deacetylase 7	1	QIPS(0.992)AEDLET(0.008)DGGGPGQVVDDGLEHR;QIPS(1)AEDLETDGGGPGQVVDDGLEHR	135.88	1.9301e-14	70433000.0	4917.4	4289.2	5171.1	5070.1	4624.3	4683.3	4190.6	4704.7	5252.700000000001	5392.200000000001	True	False	4701.236983928504	4997.917396065724	4085.756777262692	4625.612204838072	5232.476504402593	5588.281443299803	5130.448724471967	4539.2330343506555	5008.503123498995	4415.620328513683	1.0646832458783795	1.1318720868712109	0.9252962150932882	1.0475565969674467	1.184992394072945	1.2655710925175587	1.1618862906627887	1.0279944145194615	1.1342694232918524	1.0	12.108400413816529	-7.695108552338833	8.53923712131924	1.1388898467667579	1.0398718058464154	0.19419916529421855	0.08518316417920835	0.45169378499018664	52.573447794307654	0.02643319123976726	0.03409192778388511	2.017861934040204e-08	7.695108552338833	-0.0990180409203425	
QIS(ph)QDVKLEPDILLR	ddPTM_K562_Methotrexat_30min_R1	2	QISQDVKLEPDILLR	15	1	E9PIJ1;E9PJF6;A0A590UK85;A0A590UJY6;A0A5F9UK94;H0Y360;Q01433-3;Q01433-5;Q01433-2;Q01433-4;Q01433	E9PIJ1	AMPD2	AMP deaminase 2	1	QIS(1)QDVKLEPDILLR;QIS(1)QDVKLEPDILLR	74.812	0.027302999999999997	25942800.0	6329.299999999999	3785.7999999999997	8602.6	6743.5	4188.6	4082.7	4259.5	5033.9	5251.5	6736.4	True	False	6051.071550489829	4411.339102402692	6797.031821484804	6152.307824959178	4739.474317483879	4871.623993457629	5214.801303366664	4856.8548837583185	5007.358911237074	5516.372682949369	1.0969294313984927	0.7996811230752702	1.232156022107397	1.1152813956851446	0.8591649966169226	0.8831208972728397	0.9453315798414352	0.8804435745921295	0.9077267253378996	1.0	12.429504212449478	-7.764520322322252	24.990039739132115	0.9068129627602884	1.0545700797344766	0.31204664963322526	0.10755495827809183	102.93617213522997	834933.8128174029	0.033284151143424714	0.03936486273910135	1.719806862925755e-08	7.764520322322252	0.14775711697418814	
QITT(ph)SPITVRK	ddPTM_K562_Methotrexat_30min_R1	1	QITTSPITVRK	11	1	O95835-2;O95835	O95835-2	LATS1	Serine/threonine-protein kinase LATS1	1	QIT(0.04)T(0.834)S(0.126)PITVRK	104.9	0.0035778	105290000.0	4638.4	3154.3	5391.7	5125.7	3379.6	3288.5	3265.8	3867.8	3961.7	4921.7	True	False	4434.501489863338	3675.494461067359	4260.0558519400665	4676.337839162644	3824.0766373892225	3923.956083593067	3998.238783081313	3731.7672817100924	3777.521431714348	4030.332437751902	1.1002818150496982	0.9119581369117855	1.056998626722788	1.160285884945779	0.9488241221913376	0.9736060595988525	0.992036970853826	0.9259204642165082	0.9372729148420892	1.0	11.976683127513498														
QITTS(ph)PITVR	ddPTM_K562_Methotrexat_30min_R1	2	QITTSPITVR	10	0	O95835-2;O95835	O95835-2	LATS1	Serine/threonine-protein kinase LATS1	1	QIT(0.008)T(0.082)S(0.909)PIT(0.002)VR;QIT(0.006)T(0.206)S(0.781)PIT(0.006)VR	145.23	3.5255e-07	429810000.0	9072.9	7987.8	10037.2	9296.1	8835.900000000001	8526.6	8291.4	8818.1	9099.3	9248.5	True	False	8674.066179583715	9307.648180614982	7930.52888645377	8481.125346126344	9997.975725028838	10174.244774932235	10150.957513026024	8507.962424853346	8676.275529090643	7573.507030202667	1.1453169773253116	1.2289746538158175	1.0471408892640255	1.1198412191741756	1.3201249678857554	1.343399396654415	1.3403245646362574	1.123384766254805	1.1456086981223104	1.0	12.886745801972607	-10.019913730324765	1.736518685080147	1.0044637002662833	1.2162684132241033	0.311855838758092	0.0959114610221668	0.5327922810530088	3.6433309986370808	0.10256288533089028	0.029411693668199974	9.551823077126494e-11	10.019913730324765	0.21180471295782	
QIVGT(ph)PVNSEDSDTR	ddPTM_K562_Methotrexat_30min_R1	2	QIVGTPVNSEDSDTR	15	0	Q5QJE6;J3KP30	Q5QJE6	DNTTIP2	Deoxynucleotidyltransferase terminal-interacting protein 2	1	QIVGT(0.684)PVNS(0.309)EDS(0.006)DTR;QIVGT(0.548)PVNS(0.357)EDS(0.095)DTR	185.63	2.2905000000000002e-08	78077000.0	4260.2	3957.2999999999997	4919.3	3963.5	3536.3	3555.3	3524.5	4198.4	4733.1	4469.0	True	False	4072.926709019446	4611.176562401123	3886.8061562120943	3616.026108730733	4001.385434015714	4242.311407632182	4314.958843459516	4050.7398923242285	4513.05921408668	3659.620794504593	1.1129368144195395	1.2600148543601615	1.06207893507673	0.9880876494528277	1.0933879925549461	1.1592215821930447	1.1790726651075434	1.1068742145106818	1.2332040578804335	1.0	11.837478450594766	-8.257695643257398	23.54808667349073	1.145066527130627	1.1033166758263901	0.02963409844623921	0.08446992571568293	533.945820235934	3358525.454873678	0.029361994788286654	0.028340387686266268	5.5246447478233684e-09	8.257695643257398	-0.04174985130423692	
QIVGTPVNS(ph)EDSDTR	ddPTM_K562_Methotrexat_30min_R1	1	QIVGTPVNSEDSDTR	15	0	Q5QJE6;J3KP30	Q5QJE6	DNTTIP2	Deoxynucleotidyltransferase terminal-interacting protein 2	1	QIVGT(0.126)PVNS(0.533)EDS(0.338)DT(0.003)R	112.57	0.0013265999999999998	62467000.0	4236.3	3819.2	4709.2	4013.2	4034.4	4054.6	3972.4	4423.5	4052.3	4643.7	True	False	4050.0773244023967	4450.257884699759	3720.803275025716	3661.3689868949614	4564.994314677208	4838.094066150662	4863.31182004783	4267.922997736331	3863.9094574894784	3802.680931626978	1.065058414635269	1.1702948432214941	0.9784684389583456	0.9628388636141618	1.2004673536267674	1.2722850413012912	1.2789166136973424	1.1223458066754761	1.0161014102848498	1.0	11.892801177700878	-6.183086197297	18.953240606185357	1.1193898534203623	1.0650426584809773	0.010386098550823508	0.11282235659264511	41997.40380713542	10147150.93087534	0.030865729444475205	112.46972959431021	6.560150497369398e-07	6.183086197297	-0.054347194939385	
QIVGTPVNS(ph)EDSDTRQTSHLQAR	ddPTM_K562_Methotrexat_30min_R1	1	QIVGTPVNSEDSDTRQTSHLQAR	23	1	Q5QJE6;J3KP30	Q5QJE6	DNTTIP2	Deoxynucleotidyltransferase terminal-interacting protein 2	1	QIVGT(0.001)PVNS(0.624)EDS(0.365)DT(0.01)RQTSHLQAR	101.05	1.0785e-05	31712000.0	658.83	557.79	445.95	708.85	526.98	526.33	422.68	394.98	709.9	598.11	True	False	629.868622060768	649.9553166911078	352.35118926733156	646.7062210606238	596.287106868083	628.0358234689182	517.4767495966712	381.08832952320506	676.8969039488142	489.7864831956009	1.286006542996459	1.3270176678835417	0.7193975361843883	1.3203839698498896	1.2174429620385216	1.2822645071201488	1.0565353829701583	0.7780703277820221	1.3820244681568497	1.0	8.936009149679565	-3.0000000157196443	0.09578214757166134	0.9417297179337023	1.729031472822375	0.04997844211153246	0.21968732151438822	489.76248881323846	3.352454236762788	3.325434392092123	50.636730446485515	0.0009999999638041822	3.0000000157196443	0.7873017548886727	
QKEAGLSQS(ph)HDDLSNATATPSVR	ddPTM_K562_Methotrexat_30min_R1	4	QKEAGLSQSHDDLSNATATPSVR	23	1	O14523-2;O14523	O14523-2	C2CD2L	C2 domain-containing protein 2-like	1	QKEAGLS(0.325)QS(0.673)HDDLS(0.002)NATATPSVR;QKEAGLS(0.001)QS(0.999)HDDLSNATATPSVR;QKEAGLS(0.013)QS(0.984)HDDLS(0.003)NATATPSVR;QKEAGLS(0.278)QS(0.722)HDDLSNATATPSVR	114.33	2.4325e-06	191791000.0	6313.79	4819.610000000001	8858.5	7273.19	4371.74	4573.93	4297.92	5068.360000000001	5456.3099999999995	7355.24	True	False	6036.243351518682	5615.96863313726	6999.221908565213	6635.560725055959	4946.700437548816	5457.777238689015	5261.8379663729675	4890.102906026205	5202.647339040647	6023.134762267163	1.0021763732290434	0.9323996315538785	1.1620563352513538	1.101678940777721	0.8212833736575459	0.9061356675729861	0.8736045554445413	0.8118866834361723	0.8637773425946597	1.0	12.55629882295864	-7.761953411515216	24.9999999841556	0.8710844799109307	1.0492421402363357	0.5555580153049621	0.07432101309488308	10.390049992154108	505333.38532042596	0.02320637635273386	0.02794069483186609	1.7300019334031743e-08	7.761953411515216	0.17815766032540492	
QKFNDS(ph)EGDDTEETEDYR	ddPTM_K562_Methotrexat_30min_R1	3	QKFNDSEGDDTEETEDYR	18	1	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	QKFNDS(0.616)EGDDT(0.324)EET(0.06)EDYR;QKFNDS(0.795)EGDDT(0.167)EET(0.039)EDYR;QKFNDS(0.778)EGDDT(0.218)EET(0.004)EDYR	95.344	0.0013272	284887000.0	6686.5	5457.5	10560.8	6869.400000000001	5401.3	5127.099999999999	4494.0	6657.200000000001	6959.4	8273.9	True	False	6392.569466189038	6359.259113361162	8344.232401871139	6267.170367431539	6111.665623603511	6117.839512297403	5501.893897717994	6423.0625026631205	6635.859013017859	6775.4165342697515	0.943494681670966	0.9385783266897786	1.2315453019997202	0.9249867274923207	0.9020354088477044	0.902946627908948	0.8120377352284782	0.9479952221646536	0.979402370238639	1.0	12.726093926841234	-7.481515873342612	24.99881025976439	0.9146932229434656	1.0363304579356307	0.25025915262437326	0.08927076278488179	664.8728045720459	401834.3809295729	0.025474996599651016	0.03778102743030414	3.2997734711009875e-08	7.481515873342612	0.12163723499216517	
QKFNDS(ph)EGDDTEETEDYRQFR	ddPTM_K562_Methotrexat_30min_R1	1	QKFNDSEGDDTEETEDYRQFR	21	2	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	QKFNDS(0.504)EGDDT(0.495)EET(0.001)EDYRQFR	114.66	7.508e-05	142540000.0	1029.7	822.62	1710.8	1307.0	795.49	611.08	829.45	1066.3	1051.4	1293.4	True	False	984.4356209279664	958.543972850785	1351.7264594653	1192.417339248409	900.1108782923288	729.1625615210737	1015.4752766938557	1028.797624615407	1002.5206434875101	1059.1527266977482	0.9294557773525858	0.9050101545216774	1.276233753067648	1.1258219038590935	0.8498404957127534	0.688439488603758	0.9587618962752699	0.9713402030536397	0.9465307676761529	1.0	10.04869492136027														
QKFNDSEGDDT(ph)EETEDYRQFR	ddPTM_K562_Methotrexat_30min_R1	1	QKFNDSEGDDTEETEDYRQFR	21	2	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	QKFNDS(0.17)EGDDT(0.829)EET(0.001)EDYRQFR	85.046	0.0014227999999999999	132250000.0	990.83	710.57	1214.5	848.02	673.47	514.68	508.19	640.81	653.19	971.87	True	False	947.2742995863433	827.9796148751337	959.5930471245072	773.6754032359883	762.0431095344185	614.1346258487694	622.1645438098141	618.2723490854347	622.8233394708072	795.8549253871505	1.1902600202235774	1.040365006816231	1.2057386547651319	0.9721311994891872	0.9575151013405063	0.7716665516017486	0.7817562271253856	0.7768656439296029	0.7825840107326464	1.0	9.636361658860698	-7.742369105902741	1.5702786545282061	0.8073959157348761	1.135793195846054	0.7258962185104202	0.08317795748363542	0.17999899697905006	0.9212092970279222	0.02854712320525014	0.03940939669040389	1.809801292755407e-08	7.742369105902741	0.32839728011117797	
QKIDDRDS(ph)DEEGASDR	ddPTM_K562_Methotrexat_30min_R1	2	QKIDDRDSDEEGASDR	16	2	Q8TDD1-2;Q8TDD1	Q8TDD1-2	DDX54	ATP-dependent RNA helicase DDX54	1	QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR	103.45	0.004469699999999999	161123000.0	8452.7	5816.9	12685.2	8921.2	5986.799999999999	5753.9	5277.1	7490.5	7410.3	9665.3	True	False	8081.129428977204	6778.043854605691	10022.749873514871	8139.092247056554	6774.169136206005	6865.759741336826	6460.624007042192	7227.054869344182	7065.79677043513	7914.820511328091	1.021012342277514	0.8563736656952122	1.266326868584045	1.028335669192684	0.8558841134186772	0.8674561515968939	0.816269174745709	0.9131040759547808	0.8927298806488669	1.0	12.950340918618608	-7.722414780395593	7.007660104696549	0.881662022919619	1.0467175718843054	0.3426315782904241	0.10277244566160583	0.22181102628421245	29.8266545033224	0.030859061627408507	0.03940278275791358	1.8948953044495942e-08	7.722414780395593	0.16505554896468633	
QKLSSSPPS(ph)GSGGGGGASSSSHCSGESQCR	ddPTM_K562_Methotrexat_30min_R1	2	QKLSSSPPSGSGGGGGASSSSHCSGESQCR	30	1	Q9Y4X0-2;Q9Y4X0-3;Q9Y4X0	Q9Y4X0-2	AMMECR1	AMME syndrome candidate gene 1 protein	1	QKLS(0.002)S(0.022)S(0.299)PPS(0.502)GS(0.176)GGGGGASSSSHCSGESQCR;QKLS(0.014)S(0.036)S(0.314)PPS(0.414)GS(0.203)GGGGGAS(0.014)S(0.003)S(0.001)SHCSGESQCR	138.46	1.1475e-22	4497600.0	601.8	289.62	463.77	681.7	288.62	339.40999999999997	228.96	535.89	394.34	457.09000000000003	True	False	575.3455925749736	337.47478230172436	366.43101479204023	621.936419407529	326.5785889109	404.99617890598205	280.3101083269941	517.0424449546563	376.0072194720035	374.3065717073403	1.5370972247444803	0.9015999392219763	0.978959608217999	1.6615695967363444	0.8724895943484597	1.0819905647358954	0.7488784048017213	1.3813341363370908	1.004543462213089	1.0	8.548076567658233														
QKS(ph)DAEEDGGTVSQEEEDRKPK	ddPTM_K562_Methotrexat_30min_R1	3	QKSDAEEDGGTVSQEEEDRKPK	22	3	P27824-3;P27824;P27824-2	P27824-3	CANX	Calnexin	1	QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(0.999)DAEEDGGT(0.001)VSQEEEDRKPK	88.28299999999999	0.00036015	186469000.0	7885.2	4238.4	20359.0	8126.700000000001	4848.6	3251.29	3180.06	6290.1	5866.0	12598.8	True	False	7538.576049471886	4938.7235595180855	16085.924122196671	7414.244828515723	5486.275885917091	3879.5557777178974	3893.269405513365	6068.873617737382	5593.29094036307	10317.0352351319	0.7306920910574469	0.47869600587391475	1.5591614989760203	0.7186410300575982	0.5317686487330244	0.3760339757789243	0.3773631975449574	0.5882381400687146	0.5421413044434138	1.0	13.332740828403443	-7.520610310923215	22.636399816897235	0.5381215685503999	0.9218454043414855	0.21274208348440715	0.3011823864074595	36.801068273133	367240.70935112797	0.08842461129221098	0.11648653616994738	3.0157107844670276e-08	7.520610310923215	0.3837238357910856	
QKSDAEEDGGT(ph)VS(ph)QEEEDRKPK	ddPTM_K562_Methotrexat_30min_R1	1	QKSDAEEDGGTVSQEEEDRKPK	22	3	P27824-3;P27824;P27824-2	P27824-3	CANX	Calnexin	2	QKS(0.003)DAEEDGGT(0.999)VS(0.998)QEEEDRKPK	58.848	0.017908	13736000.0	2694.2	1546.4	6970.7	2525.4	1607.1	1276.7	980.72	1960.1	2063.9	4322.6	True	False	2575.7661939439927	1801.916315694311	5507.645330251794	2304.0021029364448	1818.4618191348736	1523.4042061496941	1200.6714248709357	1891.1621720047435	1967.9497394843747	3539.7352531495967	0.7276719894947283	0.5090539791333254	1.5559483792894353	0.6508967304507823	0.5137281997338182	0.4303723575920529	0.3391980865807968	0.5342665585857076	0.555959584190181	1.0	11.789425745746819	-7.509115458932244	24.939925887398104	0.5267743226349517	0.9244935023287316	0.23164100267124532	0.2965742413484563	840.3885342744491	1522837.11012749	0.08406072762709055	0.11896730556541711	3.0965959473064676e-08	7.509115458932244	0.3977191796937799	
QLDETNALLRT(ph)ES(ph)DT(ph)AARLR	ddPTM_K562_Methotrexat_30min_R1	1	QLDETNALLRTESDTAARLR	20	2	O75116;E9PF63	O75116	ROCK2	Rho-associated protein kinase 2	3	QLDET(0.001)NALLRT(0.999)ES(1)DT(1)AARLR	43.751999999999995	0.032135000000000004	0.0	342.82	463.53	460.93	344.67	331.35	396.82	332.05	183.98	402.3	279.37	True	False	327.75004328107764	540.1204538371599	364.187091981144	314.4533162346971	374.9283328793108	473.4998488950586	406.52066505056916	177.50931911914333	383.59716080942115	228.77338584935063	1.432640610988308	2.360940945258528	1.591911972754403	1.3745187844610889	1.638863417120576	2.0697330991414473	1.7769578552212657	0.7759176989059158	1.6767560587752257	1.0	7.837775416993907	-9.233860882250733	23.814896329367546	1.1697526749153704	1.7604873563931906	0.3852630800971161	0.34598966636024486	403.28281950378806	348248.02971525316	0.1605253037843844	0.09264317321773684	5.836320294471484e-10	9.233860882250733	0.5907346814778203	
QLEEPGAGTPS(ph)PVR	ddPTM_K562_Methotrexat_30min_R1	2	QLEEPGAGTPSPVR	14	0	Q96P11-5;Q96P11;Q96P11-2;Q96P11-4;Q63ZY6-4;Q63ZY6-5;Q63ZY6	Q96P11-5	NSUN5;NSUN5P2	Probable 28S rRNA (cytosine-C(5))-methyltransferase;Putative methyltransferase NSUN5C	1	QLEEPGAGT(0.19)PS(0.81)PVR;QLEEPGAGT(0.003)PS(0.997)PVR	199.61	5.7471e-10	246780000.0	5567.0	4649.9	5559.200000000001	4640.5	5246.0	4369.7	4624.1	5547.1	5961.9	5642.4	True	False	5322.281345737586	5418.216940214029	4392.399890963	4233.674569841044	5935.94095151612	5214.082681610649	5661.1721344988355	5352.005348873792	5684.732570295018	4620.506684026113	1.1518826201761871	1.1726456232485793	0.9506316495868911	0.9162792869616628	1.2846948089129897	1.1284655640985501	1.2252275608799532	1.1583156815629323	1.2303266630796394	1.0	12.17383535068657	-7.769194970897074	24.99979978855013	1.179654962390439	1.0498281956998863	0.25701573203355	0.10208037986096583	242.64573637848574	782155.4265811057	0.03209771395681586	0.03706569467744676	1.7013945178271836e-08	7.769194970897074	-0.12982676669055282	
QLEEPGAGTPS(ph)PVRLHALAGFQQR	ddPTM_K562_Methotrexat_30min_R1	2	QLEEPGAGTPSPVRLHALAGFQQR	24	1	Q96P11-5;Q96P11;Q96P11-2;Q96P11-4;Q63ZY6-4;Q63ZY6-5;Q63ZY6	Q96P11-5	NSUN5;NSUN5P2	Probable 28S rRNA (cytosine-C(5))-methyltransferase;Putative methyltransferase NSUN5C	1	QLEEPGAGTPS(1)PVRLHALAGFQQR;QLEEPGAGT(0.096)PS(0.904)PVRLHALAGFQQR	64.619	0.0035786	19795100.0	2216.9	1516.0900000000001	1993.79	2600.7	1579.2	1805.08	1515.7800000000002	2007.17	1929.8	3082.0	True	False	2119.447730441109	1766.5981033762205	1575.3207257524682	2372.700668847236	1786.892480105653	2153.8861631054197	1855.732250174227	1936.5766934252144	1840.084019214568	2523.819934809388	0.8397777120344286	0.6999699459579881	0.6241811089710109	0.9401228019963456	0.7080110809254735	0.8534230724618206	0.7352871037189828	0.7673196755106361	0.729086886839865	1.0	11.301393267714541	-13.013833971865276	2.6670909677986687	1.2555754339835445	0.7652897931580519	0.40040976313997145	0.08576516380443806	21688039.891956616	7281324.947626971	33981648.24239166	0.02102354105122488	9.686480937522401e-14	13.013833971865276	-0.49028564082549264	
QLFHPEQLITGKEDAANNYAR	ddPTM_K562_Methotrexat_30min_R1	2	QLFHPEQLITGKEDAANNYAR	21	1	P68363;Q71U36;Q9BQE3;Q71U36-2;F5H5D3;F8VVB9;F8VQQ4;P68366;F8VRZ4;P0DPH8;P0DPH7;P68363-2;P68366-2;F8VS66;A0A1W2PQM2;P0DPH7-2;F8VWV9;F8VX09;Q9NY65-2;Q9NY65;C9J2C0;C9JJQ8;C9JQ00;C9JDL2;C9JEV8;C9K0S6	P68363	TUBA1B;TUBA1A;TUBA1C;TUBA4A;TUBA8	Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-4A chain;Tubulin alpha-8 chain	0	;	85.49600000000001	0.0050448	62524000.0	10227.9	8247.2	12495.0	11267.3	8512.5	6992.9	7640.4	10169.7	9989.6	12970.6	False	True	9778.293762541667	9609.909621568884	9872.470254278076	10279.513302611782	9632.042956496556	8344.178956046206	9353.954191393974	9812.025886759167	9525.185676415094	10621.498652316235	0.9206133788294847	0.9047602354563447	0.9294799705242331	0.9678025332489332	0.9068440595617919	0.7855933733255793	0.8806623714398488	0.9237892135512774	0.8967835884758063	1.0	13.37469971873536	-11.255516360905103	1.5106314779777106	1.0002282311273911	0.9012807561294405	0.3026039134329299	0.04469672305317417	111.43961460884996	129.09003200287742	0.2123863609797832	0.013677438633391896	5.552436993760306e-12	11.255516360905103	-0.09894747499795065	
QLHDDYFYHDEL	ddPTM_K562_Methotrexat_30min_R1	2	QLHDDYFYHDEL	12	0	A8MXP8;Q14257;Q14257-2	A8MXP8	RCN2	Reticulocalbin-2	0	;	116.74	0.0019234999999999999	18711800.0	4571.299999999999	3420.9	3804.5	4105.4	3882.2	3407.8	3377.5	4840.4	4708.3	5687.5	False	True	4370.351125520069	3986.145579642181	3005.987441568704	3745.4859560446966	4392.777346926396	4066.3091201667785	4134.990351478085	4670.160388435163	4489.412160673621	4657.438636998179	0.9383593571802495	0.8558664730387814	0.645416435052836	0.8041943754859096	0.9431744976800459	0.8730784100652378	0.8878249771516424	1.0027314909392309	0.9639229865553622	1.0	12.185321046060539	-8.726736325030483	0.8513835796832263	0.9961789926323614	0.8136040976476976	0.4190317297930204	0.07775235796124644	0.6456793305579988	0.9258450527936818	0.06613092501008358	0.04013664903948792	1.876133226727173e-09	8.726736325030483	-0.18257489498466384	
QLHLEGASLELS(ph)DDDTESK	ddPTM_K562_Methotrexat_30min_R1	2	QLHLEGASLELSDDDTESK	19	0	P35580;P35580-5;P35580-2;P35580-3;P35580-4	P35580	MYH10	Myosin-10	1	QLHLEGASLELS(0.999)DDDT(0.001)ESK;QLHLEGASLELS(1)DDDTESK	173.78	6.5924e-12	87002000.0	7948.0	6718.0	11286.9	7492.200000000001	6459.3	5195.5	5181.5	6834.1	7348.599999999999	9150.0	True	False	7598.615436666484	7828.035313524556	8917.93393461474	6835.370458390921	7308.811168152505	6199.456844247458	6343.583273481477	6593.740829395241	7006.965189967958	7492.846334687185	1.014116011093095	1.0447345326282291	1.1901930903520992	0.9122528546658482	0.9754385505435081	0.8273834224449335	0.8466186266378719	0.880004811905771	0.9351539958226687	1.0	12.871298149258523	-7.358444857317975	8.009265724551424	0.9017873422934873	1.0788427935673988	0.5884838049061335	0.06561072104366486	0.1998156473767455	14.750706920767552	0.018847330348900685	0.02800209150339577	4.380817311910133e-08	7.358444857317975	0.17705545127391142	
QLHVLVPQS(ph)PPTDLPGLTR	ddPTM_K562_Methotrexat_30min_R1	1	QLHVLVPQSPPTDLPGLTR	19	0	O95402	O95402	MED26	Mediator of RNA polymerase II transcription subunit 26	1	QLHVLVPQS(0.999)PPT(0.001)DLPGLTR	129.43	4.8683e-07	56045000.0	2447.3	1973.2	2456.4	2292.7	1968.5	2034.6	1907.0	2420.4	2448.2	2744.1	True	False	2339.7196223142782	2299.2377613347217	1940.835208692171	2091.702550646388	2227.3922537284543	2427.757654760058	2334.6932939359594	2335.2731601042196	2334.3837163649628	2247.1168991273325	1.0412095709052378	1.0231945486359122	0.8637001526026056	0.9308383339819571	0.9912222433080636	1.0803877874368162	1.0389727810078049	1.0392308299631063	1.0388350144451854	1.0	11.133859462764454	-8.036479821981722	6.573149117628663	1.0415429650389818	0.961487567868609	0.34407972793369324	0.04891357535458792	0.24179792763730276	31.893882798774165	0.017302715522583046	0.01773444585570548	9.194331921525797e-09	8.036479821981722	-0.0800553971703728	
QLLAEQVSSHIT(ph)SSPLHSR	ddPTM_K562_Methotrexat_30min_R1	1	QLLAEQVSSHITSSPLHSR	19	0	H0YEW0;H3BU86;O14662-5;O14662	H0YEW0	STX16;STX16-NPEPL1	Syntaxin-16	1	QLLAEQVSSHIT(0.331)S(0.331)S(0.331)PLHS(0.006)R	136.77	2.0034999999999997e-08	10789000.0	2715.5	2559.4	2600.8	2685.1	2556.8	2408.1	2270.1	2767.0	2713.3	3287.3	True	False	2596.129871447892	2982.297347638397	2054.927622034927	2449.7014518866886	2893.064015409153	2873.431243697876	2779.2277118846478	2669.683041649471	2587.1592752279457	2691.938115411711	0.9644091952131798	1.107862521268353	0.763363619048368	0.9100140296174772	1.0747141618323128	1.0674209883381391	1.032426301322899	0.9917326948807528	0.9610768020320036	1.0	11.39442952907731	-7.7513239074429015	24.998118504426575	1.0236846441979242	0.9362981518195499	0.19545868645300501	0.08421206152649051	369.37272817144594	912817.3801408403	0.026336115966603627	0.03360037679956183	1.7728667403246528e-08	7.7513239074429015	-0.08738649237837426	
QLLAEQVSSHITSS(ph)PLHSR	ddPTM_K562_Methotrexat_30min_R1	1	QLLAEQVSSHITSSPLHSR	19	0	H0YEW0;H3BU86;O14662-5;O14662	H0YEW0	STX16;STX16-NPEPL1	Syntaxin-16	1	QLLAEQVSSHIT(0.201)S(0.201)S(0.571)PLHS(0.027)R	110.1	0.00031207	12629000.0	1752.3	1430.8	1809.4	2055.5	1538.7	1577.1	1599.6	1874.0	1863.4	2022.0	True	False	1675.2709901447772	1667.215380558342	1429.6316669140256	1875.2975063696301	1741.0660202245233	1881.8522546555043	1958.3510188673117	1808.090357806688	1776.770940721538	1655.7962064193969	1.011761582524394	1.0068964852647166	0.8634104012145043	1.1325654081699446	1.0514977709663433	1.1365240766706104	1.182724668213958	1.0919763862224459	1.073061366992587	1.0	10.69330940310277	-7.281694591551549	24.99386280658115	1.1028238361079064	0.9653101783687354	0.5055332150067785	0.06073361255356056	609.9863740193239	752689.4106166306	0.01704237745674378	0.02531121691796742	5.227636823185479e-08	7.281694591551549	-0.1375136577391709	
QLLDS(ph)DEEQEEDEGR	ddPTM_K562_Methotrexat_30min_R1	1	QLLDSDEEQEEDEGR	15	0	Q9UNS1-2;Q9UNS1	Q9UNS1-2	TIMELESS	Protein timeless homolog	1	QLLDS(1)DEEQEEDEGR	206.81	8.1568e-14	6416900.0	596.84	814.32	1019.8	781.76	878.64	734.54	563.44	887.87	915.43	1083.4	True	False	570.6036282360377	948.8725389266629	805.7579163915793	713.224314560701	994.196560739634	876.4794592192342	689.8057627348073	856.6431088504936	872.8718591095405	887.1857616393542	0.643161390667123	1.0695308468130993	0.908217817768726	0.8039176747413025	1.120618255755755	0.9879322878217334	0.7775212278657118	0.9655735539167993	0.9838659465145561	1.0	9.793092401783445	-6.247052966626271	24.677287809410327	0.9504785495166678	0.6431611350667438	0.46570308479758704	0.100746716638692	2039.5584009171207	3498427.503178107	0.025280094194499447	0.5267338259406108	5.661702346126855e-07	6.247052966626271	-0.307317414449924	
QLLDS(ph)DEEQEEDEGRNR	ddPTM_K562_Methotrexat_30min_R1	2	QLLDSDEEQEEDEGRNR	17	1	Q9UNS1-2;Q9UNS1	Q9UNS1-2	TIMELESS	Protein timeless homolog	1	QLLDS(1)DEEQEEDEGRNR;QLLDS(1)DEEQEEDEGRNR	104.81	0.00069326	69377000.0	2113.46	1768.48	2446.6000000000004	1795.5	1747.29	1656.74	1450.9	2030.5	2073.21	1920.73	True	False	2020.554828985551	2060.6912609797423	1933.0920947672469	1638.0913026935884	1977.0892613752558	1976.8815575283495	1776.3012586112675	1959.0861641016434	1976.8269196164538	1572.8671847457601	1.2846315623986748	1.3101495669596759	1.2290243661480635	1.0414682934327804	1.256996954701445	1.256864900419354	1.1293396389971673	1.2455509168870555	1.25683016264084	1.0	10.619181137234875	-12.749142806983908	2.706672167754132	0.953827362907917	1.2206459924134594	0.43962589600907553	0.07561712165796411	15426545.827967772	11876257.585213095	4757187.982703765	0.021609208364930195	1.781792772686009e-13	12.749142806983908	0.26681862950554236	
QLLDS(ph)DEEQEEDEGRNRAPELGAPGIQK	ddPTM_K562_Methotrexat_30min_R1	2	QLLDSDEEQEEDEGRNRAPELGAPGIQK	28	2	Q9UNS1-2;Q9UNS1	Q9UNS1-2	TIMELESS	Protein timeless homolog	1	QLLDS(1)DEEQEEDEGRNRAPELGAPGIQK;QLLDS(1)DEEQEEDEGRNRAPELGAPGIQK	71.05	0.00013142	98518000.0	2176.67	1744.46	2731.7	2177.94	1745.1799999999998	1555.24	1393.19	1943.6599999999999	2099.91	2527.5	True	False	2080.9861930710663	2032.7023642499346	2158.353500889268	1987.0033816699936	1974.7017593913272	1855.7681190352077	1705.6483220653593	1875.3003761230239	2002.2856424442227	2069.7452580242452	1.005431071772355	0.9821026797231697	1.042811182932535	0.9600231593557382	0.9540796152258634	0.8966166787147044	0.8240861117824477	0.9060537130608836	0.9674068026881634	1.0	11.015237497990132	-7.7739187822758105	1.9968893539927908	0.9087081762689361	1.005928141637999	0.38369118270170977	0.04718392016370328	0.3086950702536913	2.5347411541837666	0.016565428628570182	0.02134008527902975	1.6829887685857685e-08	7.7739187822758105	0.09721996536906297	
QLLFPAEEDNGAGPPRDGDGVPGGGPLS(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	4	QLLFPAEEDNGAGPPRDGDGVPGGGPLSPAR	31	1	M0QZR4;Q92888-2;Q92888;Q92888-3	M0QZR4	ARHGEF1	Rho guanine nucleotide exchange factor 1	1	QLLFPAEEDNGAGPPRDGDGVPGGGPLS(1)PAR;QLLFPAEEDNGAGPPRDGDGVPGGGPLS(1)PAR;QLLFPAEEDNGAGPPRDGDGVPGGGPLS(1)PAR;QLLFPAEEDNGAGPPRDGDGVPGGGPLS(1)PAR	86.48299999999999	3.0208e-06	104478000.0	4972.18	3904.49	4621.639999999999	4520.53	3980.9300000000003	3698.21	4374.65	5368.219999999999	5438.67	6382.790000000001	True	False	4753.608920720225	4549.640607517639	3651.6209224475147	4124.2221534756	4504.492072458838	4412.836742558832	5355.776622085448	5179.41665986394	5185.827418790391	5226.804880500326	0.9094674527558018	0.8704439349727807	0.6986334875576932	0.7890522504220239	0.8618060508177329	0.844270418247643	1.0246750633577844	0.9909336159049714	0.9921601317350088	1.0	12.351713588366104	-8.710011327543597	5.472793209952748	1.0013375963953317	0.8229618869989368	0.7133246868502263	0.05371779417032416	0.11445651221407593	7.3965279436649585	0.02316636492010681	0.017453361877966613	1.949793743340127e-09	8.710011327543597	-0.1783757093963949	
QLMEQDASS(ph)SPSAQVIGLK	ddPTM_K562_Methotrexat_30min_R1	1	QLMEQDASSSPSAQVIGLK	19	0	Q9H4L5-7;Q9H4L5-5;Q9H4L5-3;Q9H4L5;Q9H4L5-8;Q9H4L5-6;Q9H4L5-4;Q9H4L5-2	Q9H4L5-7	OSBPL3	Oxysterol-binding protein-related protein 3	1	QLMEQDAS(0.099)S(0.412)S(0.412)PS(0.077)AQVIGLK	104.76	0.0004007	16191000.0	2872.8	1787.0	3346.2	2881.9	2148.4	1877.2	1672.6	2780.2	3014.9	3322.4	True	False	2746.515151793593	2082.271376193568	2643.8783485286363	2629.2483014384006	2430.9522570029035	2239.942332407148	2047.723127130198	2682.418790167638	2874.737957057726	2720.6811652857587	1.0094954112365169	0.7653492819232506	0.9717707397187587	0.9663933925760997	0.8935086874641467	0.8233020322217295	0.752650899803293	0.985936472231173	1.0566243460415863	1.0	11.409752182737188	-9.505495349488724	23.74756411875468	1.0259683168428377	0.8823686603464299	0.3571784464185007	0.08182997183758764	400.6216694100383	547298.7653040214	0.046962728944502624	0.021710121015055556	3.122515842561959e-10	9.505495349488724	-0.14359965649640782	
QLMEQDASSSPS(ph)AQVIGLK	ddPTM_K562_Methotrexat_30min_R1	1	QLMEQDASSSPSAQVIGLK	19	0	Q9H4L5-7;Q9H4L5-5;Q9H4L5-3;Q9H4L5;Q9H4L5-8;Q9H4L5-6;Q9H4L5-4;Q9H4L5-2	Q9H4L5-7	OSBPL3	Oxysterol-binding protein-related protein 3	1	QLMEQDAS(0.213)S(0.213)S(0.213)PS(0.361)AQVIGLK	68.676	0.01792	8192300.0	1682.9	1188.6	2435.1	1984.7	1577.3	1292.8	1469.3	2177.7	2063.4	2554.2	True	False	1608.9217310475622	1384.995947254435	1924.0057876104468	1810.7044324455373	1784.7425968025868	1542.6153032899847	1798.8279269953373	2101.10905666789	1967.472984375241	2091.609629295955	0.769226584402909	0.6621675134095795	0.9198684882025885	0.8656990324982528	0.8532866610502932	0.7375254357617562	0.8600208670873402	1.0045416827494393	0.9406501848232076	1.0	11.030397901815256	-4.313717383290164	0.11643011610219776	1.0927569526068976	0.19188785605215677	0.494807647737192	0.07556218142620634	65.37298021137228	0.7186949769298739	0.708333021454569	9.264432924445229	4.856044039554177e-05	4.313717383290164	-0.9008690965547409	
QLNTITLPDFS(ph)DPETGSVHATSVAASR	ddPTM_K562_Methotrexat_30min_R1	1	QLNTITLPDFSDPETGSVHATSVAASR	27	0	Q86TV6;H0YK02	Q86TV6	TTC7B	Tetratricopeptide repeat protein 7B	1	QLNT(0.004)IT(0.008)LPDFS(0.622)DPET(0.328)GS(0.037)VHATSVAASR	110.27	2.4866e-10	0.0	939.39	689.48	735.49	682.41	545.17	625.87	639.69	709.54	940.27	783.42	True	False	898.0955403938264	803.4048508438397	581.1207000655446	622.5841748098751	616.8694107011138	746.8105197015029	783.156766228576	684.5850760288997	896.5570529313304	641.5350465049868	1.3999165677487977	1.2523163858634099	0.9058284550959874	0.9704601146915449	0.9615521615876659	1.1640993329515597	1.2207544552634013	1.0671047197786696	1.3975184330391237	1.0	9.32538427042539														
QLPFRGDDGIFDDNFIEER	ddPTM_K562_Methotrexat_30min_R1	4	QLPFRGDDGIFDDNFIEER	19	1	O60493-4;O60493;O60493-2	O60493-4	SNX3	Sorting nexin-3	0	;;;	183.73	1.6469999999999995e-87	37020000.0	3932.61	3037.47	3839.8	4125.5	3439.3599999999997	3369.5099999999998	3845.91	4184.57	4203.01	5044.99	False	True	3759.7371731742564	3539.3602893378143	3033.8784539717467	3763.823820251959	3891.6961248582656	4020.620119576607	4708.453217661904	4037.396301263145	4007.6129824847217	4131.293424047374	0.91006297235864	0.8567196579976518	0.7343652804499894	0.9110521654897584	0.9420042890697465	0.9732109794413145	1.1397043817451955	0.9772717371664588	0.9700625375959173	1.0	12.012377815537437	-7.876833958061245	1.8122347112451798	1.0183171060039222	0.8374012720602402	0.5964818993064774	0.0628256789046728	0.24165264807542242	1.6304317525654428	0.023784096652082833	0.02872056425004697	1.327902051762598e-08	7.876833958061245	-0.18091583394368205	
QLQAS(ph)PGLGAGATR	ddPTM_K562_Methotrexat_30min_R1	1	QLQASPGLGAGATR	14	0	Q92630	Q92630	DYRK2	Dual specificity tyrosine-phosphorylation-regulated kinase 2	1	QLQAS(1)PGLGAGATR	117.13	0.0013371	18452000.0	1246.5	1117.0	1367.4	1261.3	1264.4	1203.4	969.44	1038.1	1220.3	1533.9	True	False	1191.7053525169572	1301.5652642463428	1080.4014266266379	1150.7237872945818	1430.6907623135683	1435.9400185482432	1186.8615977311372	1001.5894345993189	1163.56851935306	1256.0958462050994	0.9487375952379128	1.036199003586084	0.8601265818135875	0.9161114502298003	1.1389980841318381	1.1431771093634986	0.9448813968431375	0.7973829685252984	0.9263373673819704	1.0	10.294730837720492	-8.99739820346316	24.981344174280107	0.891342523139327	1.0070642961592224	0.17632293104254693	0.09586795811370535	127.44548020776165	1223667.680656497	0.043437908967907335	0.029090597979365085	1.0060088389994745e-09	8.99739820346316	0.11572177301989539	
QLRELS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	QLRELSR	7	1	P57086	P57086	SCAND1	SCAN domain-containing protein 1	1	QLRELS(1)R	61.691	0.02479	14403000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
QLS(ph)ADSAEAHSLNVNR	ddPTM_K562_Methotrexat_30min_R1	2	QLSADSAEAHSLNVNR	16	0	H0Y4E8;Q9Y2K2-7;Q9Y2K2	H0Y4E8	SIK3	Serine/threonine-protein kinase SIK3	1	QLS(0.983)ADS(0.017)AEAHSLNVNR;QLS(0.998)ADS(0.002)AEAHSLNVNR	218.64	4.1068999999999996e-30	28295000.0	1642.0900000000001	1653.12	1872.69	1822.23	1391.63	1368.8	1186.48	1436.38	1502.6799999999998	1584.21	True	False	1569.9056897830494	1926.2699817644727	1479.63796082305	1662.4779250945899	1574.6537373919887	1633.301227678939	1452.5783426267114	1385.861701252065	1432.8207347877217	1297.2942176912334	1.2101385085774736	1.4848366357422096	1.1405569689937645	1.281496442690746	1.2137984706309461	1.2590060183769956	1.1196984637855196	1.0682709306439777	1.1044686049226997	1.0	10.34128999498984	-8.879086674087883	0.4815324668858379	0.9977041845360073	1.32023331887763	0.557469920938794	0.08586950624993613	0.6915249438669657	0.3564701891410539	0.0830737804454361	0.07250027837528306	1.3210319636321325e-09	8.879086674087883	0.3225291343416228	
QLS(ph)LAATAS(ph)PPQAPSPNR	ddPTM_K562_Methotrexat_30min_R1	1	QLSLAATASPPQAPSPNR	18	0	Q8NEQ6	Q8NEQ6	C1orf64	Uncharacterized protein C1orf64	2	QLS(0.692)LAAT(0.505)AS(0.803)PPQAPSPNR	83.404	0.012972999999999998	18237000.0	1709.1	1266.9	1926.0	1721.7	1631.2	1217.4	1294.7	1395.1	1791.3	1937.6	True	False	1633.9700104185576	1476.233691381999	1521.7589203473042	1570.7612341116956	1845.7313915579666	1452.6453204093664	1585.0694324378023	1346.0335422497922	1708.02285398438	1586.6818642721173	1.0298031679892765	0.9303904737445362	0.9590825701189972	0.9899660855027638	1.1632649449892636	0.9155239957795576	0.9989837711827287	0.848332342203507	1.0764746811850197	1.0	10.631797176006721	-11.840213841383656	18.820529800622204	0.9999999997107559	0.9865003024002443	0.0	0.08331397287524388	0.0	0.0	0.07912220360443828	0.019189953105454443	1.4447282287654496e-12	11.840213841383656	-0.013499697310511594	
QLS(ph)MTLR	ddPTM_K562_Methotrexat_30min_R1	1	QLSMTLR	7	0	E5RGV7;Q00536-3;E5RJQ8;E5RIY8;E5RIU4;E5RJM2;E5RGN0;A0A087WZU2;Q00536;Q00536-2	E5RGV7	CDK16	Cyclin-dependent kinase 16	1	QLS(0.995)MT(0.005)LR	82.287	0.030698000000000003	10620000.0	3646.9	3190.3	3438.0	3046.6	2792.8	2931.3	2613.3	2889.9	3161.0	3242.6	True	False	3486.586642674762	3717.442849171986	2716.4107830498633	2779.5093081516475	3160.1021520004224	3497.732238964984	3199.3990482657837	2788.2605789890854	3014.045799946754	2655.333718563567	1.3130502649440503	1.3999908272105923	1.0230016528842698	1.0467645888424355	1.190096043261152	1.3172477020542346	1.204895273953187	1.050060321795419	1.1350911483838786	1.0	11.374677472946209	-3.0000000000000013	0.08459991837958128	0.8923124468940746	1.9451210077604146	0.2956136916262161	0.11194932950589981	269.4293555753772	1.6550263228111937	2.909068122307126	33.01910261141331	0.000999999999999997	3.0000000000000013	1.05280856086634	
QLS(ph)PQSK	ddPTM_K562_Methotrexat_30min_R1	2	QLSPQSK	7	0	E7ERS3;Q86VM9;H3BRH3	E7ERS3	ZC3H18	Zinc finger CCCH domain-containing protein 18	1	QLS(0.884)PQS(0.116)K;QLS(0.993)PQS(0.007)K	99.788	0.009966	194567000.0	15408.7	11917.7	21447.0	17277.1	12461.4	10759.3	11303.3	12629.4	13485.7	16591.1	True	False	14731.351997856436	13886.897358736473	16945.567790596382	15762.443467428231	14100.29252253582	12838.382451027179	13838.352757916275	12185.216843587928	12858.752750503623	13586.291018953929	1.084280616196507	1.022125710347524	1.2472548811854538	1.160172665625843	1.0378323637308238	0.9449512330566628	1.0185526527152038	0.8968758895704948	0.9464505605366959	1.0	13.729864041770856	-7.995729419597564	3.564472597371156	0.9595292182245471	1.12862314571313	0.6180588744840794	0.061751624354312695	0.16533205455067573	4.523797838060897	0.021820472785240026	0.023703030219796025	1.0098818812666001e-08	7.995729419597564	0.16909392748858287	
QLS(ph)SGVSEIR	ddPTM_K562_Methotrexat_30min_R1	3	QLSSGVSEIR	10	0	F8WE04;P04792	F8WE04	HSPB1	Heat shock protein beta-1	1	QLS(0.5)S(0.5)GVSEIR;QLS(0.495)S(0.495)GVS(0.011)EIR;QLS(0.915)S(0.084)GVSEIR	153.49	6.4113e-09	7512050000.0	10466.0	8455.599999999999	11805.900000000001	10310.300000000001	8440.1	8169.200000000001	7471.6	9164.2	9175.6	9764.2	True	False	10005.927171634561	9852.744179374558	9328.00292716939	9406.412006773431	9550.121087474492	9747.782283134706	9147.296494479244	8841.889891681998	8749.028358744521	7995.808762967491	1.2513965088781154	1.2322385979273849	1.1666115590923012	1.176417831594364	1.1943908828467462	1.21911148354141	1.144011414685761	1.1058155783606436	1.0942018022323845	1.0	12.965028251990033	-9.71180702078746	0.5539373354824316	0.9960199418730009	1.2165789388180515	0.8748382366557861	0.025427533489352554	0.2941402219663364	0.22053695141245913	0.029211914362400726	0.014925379301460897	1.9417485039263175e-10	9.71180702078746	0.22055899694505054	
QLS(ph)TSSDSPAPASSSSQVTASTSQQPVRR	ddPTM_K562_Methotrexat_30min_R1	2	QLSTSSDSPAPASSSSQVTASTSQQPVRR	29	1	A0A3B3IT55;A0A0G2JNT7;Q7Z3B3-4;Q7Z3B3-2;Q7Z3B3;A0A0G2JQF4;A0A1W2PQT4;A0A1W2PPV8	A0A3B3IT55	KANSL1	KAT8 regulatory NSL complex subunit 1	1	QLS(0.615)T(0.228)S(0.055)S(0.021)DS(0.078)PAPASSSSQVT(0.001)AS(0.001)T(0.001)S(0.001)QQPVRR;QLS(0.29)T(0.29)S(0.29)S(0.025)DS(0.103)PAPASSSSQVTASTSQQPVRR	126.62	1.518e-15	33357000.0	1319.66	1254.71	1239.8600000000001	1390.06	851.4100000000001	898.98	899.1400000000001	1158.81	1250.5700000000002	1461.28	True	False	1261.6493265162674	1462.0295010765708	979.6303296894134	1268.1955980073785	963.3853384541252	1072.6951619365957	1100.7950331985214	1118.0539954802396	1192.4312736600484	1196.628031907288	1.0543370979746671	1.2217911181190226	0.8186590181478491	1.0598076964535252	0.805083378264672	0.896431583862232	0.9199141285734216	0.934337125379045	0.9964928464524181	1.0	10.224759049374597	-6.757687305388963	24.99999936111396	0.9252768284505818	1.1380641230815378	0.5014566841614831	0.08338528577106294	68.86301669654371	458814.043917919	0.020131201248102255	0.049181768044907516	1.747079607891515e-07	6.757687305388963	0.21278729463095603	
QLSES(ph)FKSK	ddPTM_K562_Methotrexat_30min_R1	1	QLSESFKSK	9	1	Q08945	Q08945	SSRP1	FACT complex subunit SSRP1	1	QLS(0.001)ES(0.988)FKS(0.01)K	91.961	0.029344	4907000.0	1121.8	893.26	1564.0	1008.8	503.95	669.67	478.36	583.79	828.29	1179.1	True	False	1072.4870152053925	1040.8560321760863	1235.7377733246033	920.3600702630417	570.2282581998754	799.0742498098735	585.6444069675961	563.2577748046779	789.7829786896232	965.5535642873936	1.1107483363669408	1.0779889077870766	1.2798231180852337	0.9531942134585708	0.5905713357505136	0.8275814821310441	0.6065374606118498	0.5833521781056014	0.8179587419083331	1.0	9.915212484982007	-7.543274216397205	4.911071190225415	0.7164619017071695	1.146006670067049	0.6698112927449489	0.13165955158630246	0.09933346206211463	6.393189736602881	0.03736727847486306	0.050609397436540554	2.8623700798827606e-08	7.543274216397205	0.42954476835987954	
QLSLAAT(ph)AS(ph)PPQAPSPNR	ddPTM_K562_Methotrexat_30min_R1	1	QLSLAATASPPQAPSPNR	18	0	Q8NEQ6	Q8NEQ6	C1orf64	Uncharacterized protein C1orf64	2	QLS(0.48)LAAT(0.822)AS(0.699)PPQAPSPNR	78.249	0.027045999999999997	0.0	2585.1	2365.9	2885.3	2752.4	2666.2	2303.8	2523.9	2755.7	2661.7	3526.7	True	False	2471.462099311341	2756.824761576027	2279.714959957466	2511.1013653766813	3016.8520329645944	2748.9767448325097	3089.948822530139	2658.78046905437	2537.9581479652884	2887.980455578281	0.8557752163930286	0.9545856711914652	0.789380328233898	0.8695008169208214	1.0446234243508785	0.9518681954798971	1.0699341183427145	0.92063658669116	0.8788003198093302	1.0	11.495845263474532	-7.733892192475051	23.59860392261252	0.9770013145386099	0.8679778376093923	0.4159354969308263	0.0640468577587069	122.01135725431017	104521.21543707009	0.0192406060841243	0.024831065491881965	1.8454734752774658e-08	7.733892192475051	-0.10902347692921766	
QLSS(ph)GVSEIR	ddPTM_K562_Methotrexat_30min_R1	5	QLSSGVSEIR	10	0	F8WE04;P04792	F8WE04	HSPB1	Heat shock protein beta-1	1	QLS(0.27)S(0.73)GVSEIR;QLS(0.036)S(0.963)GVS(0.001)EIR;QLS(0.271)S(0.729)GVSEIR;QLS(0.032)S(0.961)GVS(0.007)EIR;QLS(0.082)S(0.86)GVS(0.058)EIR	148.13	2.0024e-07	2612735000.0	14360.8	10695.95	15361.699999999999	13421.949999999999	11433.519999999999	11578.7	10096.640000000001	12260.990000000002	12426.84	13240.9	True	False	13729.5164271364	12463.273937435693	12137.489100051504	12245.268482421712	12937.228285928048	13816.119904241768	12361.068536594428	11829.76403210471	11849.118920787834	10842.844703055682	1.2662282641811893	1.1494468729154952	1.119400806010896	1.1293409449063496	1.1931581278003673	1.2742154187957864	1.1400208040525461	1.091020332401413	1.092805370296281	1.0	13.404455687955364	-9.711219581516158	1.2310793603711765	1.0102901368450803	1.1807796438848457	0.5623880783784964	0.05180067821213008	0.35429664089193136	1.0655285357007234	0.052006146328561875	0.016931256253516425	1.944376746204526e-10	9.711219581516158	0.1704895070397654	
QLSS(ph)SSSYSGDISR	ddPTM_K562_Methotrexat_30min_R1	1	QLSSSSSYSGDISR	14	0	A0A0A0MS99;I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9	A0A0A0MS99	ABCC1	Multidrug resistance-associated protein 1	1	QLS(0.164)S(0.326)S(0.164)S(0.164)S(0.164)Y(0.001)S(0.017)GDISR	100.18	0.0041876000000000005	19328000.0	418.6	482.3	404.64	325.28	377.95	362.26	270.42	316.31	416.51	517.25	True	False	400.19884521748753	561.9918773017113	319.7115937327795	296.7632074297802	427.65704968080746	432.26161801502934	331.0685687184912	305.1851980137851	397.1465410110163	423.57101274502094	0.9448211354784024	1.32679494203258	0.7548004563882604	0.7006220881513064	1.009646639672782	1.0205174693463737	0.7816129025755266	0.7205053906686927	0.9376150139199646	1.0	8.726460051059764	-6.772858545678572	24.99994153467347	0.8574594350516298	1.1358080885870976	0.3572690317359464	0.14459934212850933	198.34167691738133	434231.0068412398	0.03807716341231001	0.08037033356854317	1.6871024430773032e-07	6.772858545678572	0.2783486535354678	
QLSSSSSYS(ph)GDISR	ddPTM_K562_Methotrexat_30min_R1	1	QLSSSSSYSGDISR	14	0	A0A0A0MS99;I3L4X2;P33527-8;P33527-6;P33527-7;P33527-5;P33527-4;P33527-2;P33527-3;P33527;P33527-9	A0A0A0MS99	ABCC1	Multidrug resistance-associated protein 1	1	QLS(0.001)S(0.005)S(0.235)S(0.104)S(0.104)YS(0.546)GDIS(0.005)R	158.91	6.5666e-08	22065000.0	501.33	381.1	740.32	720.46	416.6	405.71	394.96	481.18	469.09	464.62	True	False	479.2921334755928	444.0702974075931	584.9369490714001	657.2983903863118	471.3902021352679	484.107715576872	483.53983396588706	464.25662666457964	447.28210828757466	380.4728157401484	1.25972766948726	1.1671538124050362	1.5373948541724323	1.727583057695315	1.2389589548421598	1.272384505671236	1.270891937510012	1.2202097165902468	1.1755954427846824	1.0	8.571649568607613	-9.593423886638892	0.6803728104055812	1.0134257972740914	1.3922967657680185	0.37896652860480384	0.15239066861981945	0.8026125272452341	0.8070044214926904	0.16307262065499592	0.07337427786981097	2.550210992215629e-10	9.593423886638892	0.3788709684939271	
QLSSTS(ph)PLAPYPTSQMVSSDR	ddPTM_K562_Methotrexat_30min_R1	1	QLSSTSPLAPYPTSQMVSSDR	21	0	Q6UUV7;Q6UUV7-3	Q6UUV7	CRTC3	CREB-regulated transcription coactivator 3	1	QLSS(0.002)T(0.04)S(0.957)PLAPY(0.001)PTSQMVSSDR	191.89	9.422100000000001e-22	10776000.0	2189.1	1639.3	2197.9	2036.7	1946.8	1403.7	1542.3	1957.4	2242.2	2343.1	True	False	2092.8697851543297	1910.1664616643077	1736.5908260806555	1858.1456731807468	2202.838323372393	1674.9451587470237	1888.2000352582227	1888.557132535118	2137.9606114016506	1918.7418848967789	1.0907510810225098	0.995530705145923	0.9050674505779487	0.9684187788920384	1.1480639166277946	0.8729392796035875	0.9840823563195426	0.9842684664366491	1.1142512852981603	1.0	10.905944933441226	-9.72636051113872	24.849814949843136	1.0571258182439287	0.990715588916708	0.09182084524965262	0.07943868302864306	343.2917631299598	243188.14696172817	0.053210257406034335	0.02010971044043469	1.8777574289992862e-10	9.72636051113872	-0.06641022932722074	
QLSSTSPLAPY(ph)PTSQMVSSDR	ddPTM_K562_Methotrexat_30min_R1	1	QLSSTSPLAPYPTSQMVSSDR	21	0	Q6UUV7;Q6UUV7-3	Q6UUV7	CRTC3	CREB-regulated transcription coactivator 3	1	QLSST(0.002)S(0.011)PLAPY(0.983)PT(0.001)S(0.002)QMVSSDR	125.47	1.2079000000000001e-06	13021000.0	2247.3	1976.1	2454.3	1795.2	1929.3	1776.5	1605.7	1967.6	2356.0	2077.3	True	False	2148.5113828410417	2302.61693704315	1939.1759699939732	1637.8176032278068	2183.036766633635	2119.7834825917844	1965.819099146814	1898.3983927537045	2246.470074240605	1701.0808405514401	1.26302720695188	1.3536199351329532	1.1399669690979235	0.9628099759779052	1.2833233521846963	1.2461391793141432	1.155629439991549	1.115995399806102	1.3206133539852025	1.0	10.732235988562477	-13.39129716255305	1.789441116233212	6.155390326238546e-05	1.1994370701681605	0.2375453253154961	0.10960322401150219	1681251.3117355632	163688.45465849902	6780156.618862304	0.029151534955462067	4.061653186665063e-14	13.39129716255305	1.199375516264898	
QLSTSSDSPAPASSSSQVT(ph)ASTSQQPVRR	ddPTM_K562_Methotrexat_30min_R1	1	QLSTSSDSPAPASSSSQVTASTSQQPVRR	29	1	A0A3B3IT55;A0A0G2JNT7;Q7Z3B3-4;Q7Z3B3-2;Q7Z3B3;A0A0G2JQF4;A0A1W2PQT4;A0A1W2PPV8	A0A3B3IT55	KANSL1	KAT8 regulatory NSL complex subunit 1	1	QLS(0.052)T(0.029)S(0.004)S(0.013)DS(0.077)PAPAS(0.011)S(0.004)S(0.01)S(0.003)QVT(0.203)AS(0.199)T(0.199)S(0.199)QQPVRR	61.903999999999996	0.0011384000000000001	44478000.0	617.39	489.1	608.6	584.95	447.37	308.01	480.56	462.47	543.77	564.4	True	False	590.2502748419128	569.9154617214742	480.8631770110955	533.668341693464	506.2069964696466	367.5285733031778	588.3378129700396	446.2046679695089	518.490251387867	462.1816908521795	1.2770957537361507	1.2330983096077501	1.040420221156902	1.1546721825121977	1.0952554081843708	0.7952036624936862	1.2729578531881067	0.9654312942314701	1.1218320882245785	1.0	8.852316298909656	-6.481998373628822	1.0698865290092314	1.04767230911297	1.362188766983631	0.2953032962657406	0.12073266103798803	1.5737749605877018	1.9320380218397442	0.038285263696673566	0.5182861913661839	3.2961094652134644e-07	6.481998373628822	0.31451645787066096	
QLTEMLPSILNQLGADS(ph)LTSLRR	ddPTM_K562_Methotrexat_30min_R1	1	QLTEMLPSILNQLGADSLTSLRR	23	1	P20290;H0Y9Y1;D6RDG3;P20290-2	P20290	BTF3	Transcription factor BTF3	1	QLTEMLPSILNQLGADS(0.99)LT(0.007)S(0.003)LRR	110.07	2.3898e-06	55797000.0	838.27	633.44	446.28	796.44	571.87	535.65	459.67	1057.1	768.86	1457.2	True	False	801.4206545161564	738.1051933609702	352.6119267770483	726.6173417528719	647.0809286968209	639.1567815650372	562.7626987013862	1019.9211938300156	733.1158664179258	1193.2869594432968	0.6716076532756569	0.6185479423200249	0.2954963380657005	0.6089208769128426	0.5422676612494811	0.5356270564317761	0.4716071806935118	0.8547157796024508	0.6143667796050882	1.0	10.220725306055176	-10.092211636284988	0.7279135977275822	0.9944810256834729	0.5284471075689987	0.5332577336642941	0.12648680397409479	0.6186202783394059	0.7364511869891205	0.12387346989539372	0.047410175069338416	8.087017142597822e-11	10.092211636284988	-0.46603391811447414	
QLVAGNS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	QLVAGNSPK	9	0	Q96EU6-2;Q96EU6	Q96EU6-2	RRP36	Ribosomal RNA processing protein 36 homolog	1	QLVAGNS(1)PK;QLVAGNS(1)PK	89.44	0.014311	65829000.0	10642.400000000001	7890.4	14033.6	11735.8	8121.8	8190.900000000001	7426.8	9737.0	9928.5	12497.5	True	False	10174.572838849952	9194.15448613191	11088.13914049114	10706.940635004956	9189.959058334658	9773.675501019443	9092.44895406586	9394.544191015859	9466.926202078883	10234.081646748971	0.9941852322511103	0.8983858839012281	1.0834522845548602	1.0462043400255847	0.8979759372209039	0.955012461144886	0.8884479592708965	0.9179665079181965	0.9250391514207054	1.0	13.321094027770641	-7.768218679904225	24.99939736979974	0.9257376464045667	1.0034658155313865	0.3219000671057666	0.05286432962595103	191.92735797507262	707751.5265177761	0.01668861342085418	0.019341741514581543	1.7052235431394897e-08	7.768218679904225	0.07772816912681979	
QLVHELDEAEYR	ddPTM_K562_Methotrexat_30min_R1	1	QLVHELDEAEYR	12	0	H0YKK6;Q06323-3;Q06323;Q06323-2	H0YKK6	PSME1	Proteasome activator complex subunit 1	0		87.641	0.030929	5874800.0	1489.0	1243.1	1347.3	1680.1	1307.2	1307.9	1103.6	1408.0	1689.3	1556.9	False	True	1423.5453428782587	1448.501145912828	1064.5201419438856	1532.8082415235297	1479.1197125089345	1560.633164583054	1351.110392861943	1358.479841938002	1610.7648117209915	1274.9303233305432	1.1165671698508852	1.13614141840227	0.834963387774011	1.202268244369091	1.1601572928667825	1.2240929061175356	1.0597523395101247	1.065532615452427	1.2634139938825337	1.0	10.31620268866208														
QLVIYEEIS(ph)DPEEDDE	ddPTM_K562_Methotrexat_30min_R1	6	QLVIYEEISDPEEDDE	16	0	Q16384;Q99909;Q7RTT5;Q7RTT3;Q16385	Q16384	SSX1;SSX3;SSX7;SSX9;SSX2	Protein SSX1;Protein SSX3;Protein SSX7;Protein SSX9;Protein SSX2	1	QLVIYEEIS(1)DPEEDDE;QLVIYEEIS(1)DPEEDDE;QLVIYEEIS(1)DPEEDDE;QLVIYEEIS(1)DPEEDDE;QLVIYEEIS(1)DPEEDDE;QLVIYEEIS(1)DPEEDDE	144.4	2.6875e-09	86497480.0	19023.3	17420.35	21648.41	20470.949999999997	17852.8	17130.350000000002	17982.11	18882.49	19405.06	20994.949999999997	True	False	18187.058509856266	20298.766742178865	17104.704584026895	18676.293596700238	20200.756122612846	20440.547695477722	22015.05591390602	18218.382124002786	18502.92299611351	17192.56110977492	1.0578446337187029	1.1806714899874862	0.994889852350266	1.0863008412447481	1.174970732611071	1.188918135289113	1.2804989188835423	1.0596665620484333	1.0762167938779974	1.0	14.0694968531118	-6.19772301996722	20.619193440638167	1.12223888846081	1.0578393148611158	0.03447222387008264	0.08612338375410929	36463.40370335928	11795681.551793551	0.02220545937165404	38.31656048064013	6.342741033434817e-07	6.19772301996722	-0.06439957359969428	
QLVIYEEIS(ph)DPQEDDE	ddPTM_K562_Methotrexat_30min_R1	1	QLVIYEEISDPQEDDE	16	0	H7BYZ5;O60225;O60225-2	H7BYZ5	SSX5	Protein SSX5	1	QLVIYEEIS(1)DPQEDDE	76.548	0.029445	1832500.0	755.77	620.9	804.24	610.85	691.39	526.46	588.36	748.77	574.26	717.47	True	False	722.5472557334465	723.4931715045251	635.4410145898843	557.297728905808	782.3199036349087	628.1909441290572	720.3147070897547	722.4353346931235	547.5627779428739	587.5292305735533	1.2298064813355531	1.2314164706294564	1.0815479154450902	0.9485446849372363	1.3315420968437577	1.0692079839428748	1.2260065875983304	1.2296159869150225	0.9319753800306011	1.0	9.198516819757819	-9.76695376531631	24.99999229791597	0.9659875923672951	1.1643776822262462	0.3739501917385266	0.10468470104158197	156.94860641792832	711504.5368560266	0.09178492127590117	0.026371315012503695	1.71019737180315e-10	9.76695376531631	0.198390089858951	
QLVNNKDTTS(ph)FEDISPQGVSDDSSTGSR	ddPTM_K562_Methotrexat_30min_R1	2	QLVNNKDTTSFEDISPQGVSDDSSTGSR	28	1	A0A2R8Y802;A0A2R8Y885;A0A2U3TZV9;A0A2R8Y7B1;H7C2C6;A0A2R8Y5D7;A0A2R8Y820;A0A2R8YCU9;A0A2R8Y7D4;A0A2R8YDS8;H0Y470;H0Y7U8;Q3V6T2-5;Q3V6T2-4;Q3V6T2-2;Q3V6T2-3;Q3V6T2	A0A2R8Y802	CCDC88A	Girdin	1	QLVNNKDT(0.159)T(0.159)S(0.682)FEDISPQGVSDDSSTGSR;QLVNNKDT(0.062)T(0.166)S(0.647)FEDIS(0.125)PQGVSDDSSTGSR	100.39	3.7875e-08	53479000.0	2123.6400000000003	1595.22	2781.8	2043.3400000000001	1739.1399999999999	1777.26	1341.75	1786.0500000000002	2230.1	2553.9	True	False	2030.2873283747383	1858.802990896196	2197.9381955462786	1864.2035546900108	1967.8673935226336	2120.690341835673	1642.671592626416	1723.2336091572242	2126.4231377606	2091.363962203015	0.9707957892877052	0.8887993790129948	1.050959199483862	0.8913816955735833	0.9409492699920622	1.0140226092457698	0.7854546708818907	0.8239759507675521	1.0167637848749456	1.0	11.030228442128577	-8.727105088214515	24.999746501214645	0.8918794061717246	0.9564914745463421	0.08238068579034685	0.0804518451811744	382.22700773759277	278309.69369656895	0.03014122227395172	0.023346197111668986	1.8745408619910863e-09	8.727105088214515	0.06461206837461753	
QLVRGEPNVSY(ph)ICSR	ddPTM_K562_Methotrexat_30min_R1	2	QLVRGEPNVSYICSR	15	1	P49841;P49841-2;A0A3B3ITW1;A8MT37;P49840	P49841	GSK3B;GSK3A	Glycogen synthase kinase-3 beta;Glycogen synthase kinase-3 alpha	1	QLVRGEPNVS(0.153)Y(0.847)ICSR;QLVRGEPNVS(0.06)Y(0.94)ICSR	132.24	0.00048975	41020000.0	1585.1100000000001	1443.43	1472.05	3356.9	1243.8899999999999	1392.32	1847.31	1317.5900000000001	1644.05	2412.9	True	False	1515.4304623571238	1681.9322733850481	1163.0868217535044	3062.6057889234767	1407.483337815742	1661.3661348056257	2261.616291987855	1271.2496128828793	1567.6184743443418	1975.9004285209505	0.7669568974644593	0.8512231937942588	0.5886363528065667	1.5499798191834866	0.7123250329315967	0.8408147044379317	1.144600334785481	0.643377365849587	0.7933691656303623	1.0	10.948294531737266														
QMLDDFGPHR	ddPTM_K562_Methotrexat_30min_R1	2	QMLDDFGPHR	10	0	A0A494BZY8;A0A1B0GVZ4;A0A494C0Q8;A0A494C085;P06132	A0A494BZY8	UROD	Uroporphyrinogen decarboxylase	0	;	96.229	0.013269	8468400.0	4842.700000000001	4017.3	5054.1	5384.700000000001	4237.6	3887.6	4118.8	4714.3	5117.7	5508.3	False	True	4629.820706485252	4681.0905425755	3993.3134783630903	4912.631711286081	4794.918676352405	4638.823679664409	5042.545746755864	4548.49539690932	4879.7792440327485	4510.6934934816845	1.0264099551822168	1.0377762420213328	0.8852992304029857	1.0891078541215955	1.063011415712783	1.0284058729257226	1.1179091982292186	1.0083805081152737	1.0818246132406075	1.0	12.139133541356138														
QMS(ph)FDLTK	ddPTM_K562_Methotrexat_30min_R1	1	QMSFDLTK	8	0	Q9ULH0-2;Q9ULH0-4;Q9ULH0;H0Y8E4;E9PH70;A0A1W2PPB7;Q9ULH0-3	Q9ULH0-2	KIDINS220	Kinase D-interacting substrate of 220 kDa	1	QMS(0.909)FDLT(0.091)K	80.834	0.027402	24176000.0	5292.6	3664.5	8399.2	5895.6	4302.4	3753.2	3948.5	4876.7	5035.9	6520.6	True	False	5059.943641180304	4269.996339150157	6636.322701859339	5378.741901509503	4868.24101216221	4478.452781797628	4834.051636657652	4705.183696860128	4801.7821081783795	5339.656154094121	0.9476160065663872	0.799676274262751	1.2428370873227508	1.007319899687813	0.911714326104976	0.8387155750401315	0.905311409041048	0.8811772820338781	0.8992680370432967	1.0	12.382531127557147	-7.801693296298836	5.669750625152409	0.8957647249516899	1.0026223234836755	0.14889484705129785	0.10792654991436403	0.34478215660473804	27.234162611365875	0.03458130659528618	0.04025936076295442	1.578725790213078e-08	7.801693296298836	0.10685759853198562	
QNDTPKGPQPPTVS(ph)PIR	ddPTM_K562_Methotrexat_30min_R1	2	QNDTPKGPQPPTVSPIR	17	1	P46087-2;P46087;P46087-4	P46087-2	NOP2	Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase	1	QNDTPKGPQPPT(0.05)VS(0.95)PIR;QNDTPKGPQPPT(0.188)VS(0.812)PIR	97.08	0.0015989	396830000.0	5667.799999999999	4426.200000000001	8871.5	7059.9	4422.4	4624.7	4425.3	5761.1	5323.2	7810.0	True	False	5418.650298432094	5157.554317463889	7009.49338622072	6440.9695282018665	5004.023115513704	5518.357822652532	5417.786173914425	5558.478847577433	5075.725593886924	6395.533319552663	0.8472554246361276	0.8064306852559147	1.0959982594088027	1.0071043658720837	0.7824246807088344	0.8628456059765341	0.8471203108818098	0.8691188943670803	0.793636017557633	1.0	12.642848954229096	-7.760024020120222	24.99999788404042	0.8522260712732145	0.9409139308411879	0.14922855295423387	0.09265871860182122	72.05062420685375	1272635.9418663892	0.029022227964150715	0.03547065009359576	1.73770471647477e-08	7.760024020120222	0.08868785956797343	
QNFRPPT(ph)PPYPGPGGGGWGSGSSFR	ddPTM_K562_Methotrexat_30min_R1	2	QNFRPPTPPYPGPGGGGWGSGSSFR	25	1	Q8TAP9	Q8TAP9	MPLKIP	M-phase-specific PLK1-interacting protein	1	QNFRPPT(0.999)PPY(0.001)PGPGGGGWGSGSSFR;QNFRPPT(1)PPYPGPGGGGWGSGSSFR	102.16	4.4805e-06	33704000.0	1793.87	1230.31	1852.19	1727.6799999999998	1386.1399999999999	1276.5500000000002	1419.82	1748.57	1721.6399999999999	1996.09	True	False	1715.0136227192877	1433.597815805657	1463.4406306739747	1576.216976796245	1568.4417061636582	1523.2252207726094	1738.2507774494788	1687.0718020010893	1641.6013321797948	1634.5787584924299	1.0492083136459223	0.8770441976915586	0.8953013876331688	0.9642955217709963	0.9595387790370102	0.931876309329676	1.0634243033065385	1.032114110889997	1.0042962589908129	1.0	10.67470317645007	-8.750752462818088	24.998670129063182	1.027634845425672	0.9421805978568621	0.40812049776438875	0.04626146144473037	197.06045054843412	460961.4704895404	0.017727445359585082	0.013590312103361818	1.7752010135406147e-09	8.750752462818088	-0.08545424756880993	
QNGSNDS(ph)DRY(ph)SDNEEDSKIELK	ddPTM_K562_Methotrexat_30min_R1	1	QNGSNDSDRYSDNEEDSKIELK	22	2	G5E972;P42167;H0YJH7;P42167-2;P42167-3	G5E972	TMPO	Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin	2	QNGS(0.279)NDS(0.511)DRY(0.812)S(0.398)DNEEDSKIELK	67.251	0.0057515	15858000.0	2542.7	1508.0	4619.2	2968.2	1589.0	1457.8	1126.9	2324.1	2058.0	3706.1	True	False	2430.925952543013	1757.171368382708	3649.6930451029425	2707.982514427794	1797.9813518793585	1739.4992180817908	1379.6360109787288	2242.3600856875805	1962.324029196591	3034.8893771567396	0.8009932654680302	0.5789902530249481	1.2025786088197346	0.8922837632272412	0.5924371957055686	0.5731672564986388	0.45459186135846963	0.7388605669009107	0.6465883217908291	1.0	11.567428215332173	-7.7574842336051635	24.949115653798742	0.6391777542030318	0.8718647920222505	0.19463989722261577	0.19529084841205832	146.6831290292562	925272.1871416705	0.058838913400866645	0.07313355841152627	1.7478967159749315e-08	7.7574842336051635	0.23268703781921873	
QNLWFANPGGSNS(ph)MPSQSR	ddPTM_K562_Methotrexat_30min_R1	1	QNLWFANPGGSNSMPSQSR	19	0	M0QZ22;Q5PRF9;M0QX45	M0QZ22	SAMD4B	Protein Smaug homolog 2	1	QNLWFANPGGS(0.1)NS(0.898)MPS(0.002)QS(0.001)R	104.16	0.00040501	20064000.0	1396.4	1338.9	1536.0	1852.1	1039.1	1378.4	1337.1	1794.5	1640.1	2073.8	True	False	1335.0159280021492	1560.1304675912527	1213.6145906819627	1689.7292685707569	1175.7598632711395	1644.7562918122803	1636.978711757616	1731.386417867718	1563.852108982181	1698.2147244671344	0.7861290499769105	0.9186885763699819	0.7146414250193069	0.995003308018637	0.6923505292536368	0.9685208048872452	0.9639409482044546	1.0195332739274134	0.920880078620733	1.0	10.7298031713142	-8.454772736220216	18.518662661442864	0.9760757514298373	0.8304784428651464	0.43752759337729585	0.0865844123903524	12.469287222170564	3389.884552226714	0.027991647617447643	0.024685932626571868	3.509354684036336e-09	8.454772736220216	-0.14559730856469089	
QNPQSPPQDSS(ph)VTSKR	ddPTM_K562_Methotrexat_30min_R1	1	QNPQSPPQDSSVTSKR	16	1	C9JEF4;C9J172;Q9BRX7;A0A2R8YCS4;E7EP63;E7ER52;A6NDI8;Q9UBN7	C9JEF4	HDAC6	Histone deacetylase 6	1	QNPQS(0.118)PPQDS(0.064)S(0.588)VT(0.194)S(0.036)KR	91.59200000000001	0.0064796	6187900.0	2159.2	1622.2	2334.9	2038.1	1337.4	1481.9	1284.0	1790.7	1837.6	2534.0	True	False	2064.28415335308	1890.2409773146087	1844.83639829643	1859.4229373543853	1513.291541852393	1768.2562019998668	1571.9696850622825	1727.7200660215783	1752.1703770902106	2075.0680450379577	0.9948031141867059	0.9109296352159053	0.8890486279271308	0.8960780547899442	0.7292732137006676	0.8521437194448828	0.7575509096298225	0.8326088728285411	0.8443917688772271	1.0	11.018942930340565	-6.591004446678538	1.069540092091099	0.8282407753949464	1.0184296478347183	0.29274049846827566	0.0703674949031506	1.185903010433069	1.636034383969674	0.022293999518451464	0.2272192760388425	2.564457779270109e-07	6.591004446678538	0.1901888724397719	
QNPTVGSHCAGLFSTSVLGGSS(ph)SAPNLQDYAR	ddPTM_K562_Methotrexat_30min_R1	1	QNPTVGSHCAGLFSTSVLGGSSSAPNLQDYAR	32	0	A0A087WZV0;O43314-2;O43314;K7ENU7	A0A087WZV0	PPIP5K2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2	1	QNPTVGSHCAGLFS(0.001)T(0.004)S(0.003)VLGGS(0.156)S(0.418)S(0.418)APNLQDYAR	89.17	5.558600000000001e-07	8665200.0	520.71	604.69	296.56	543.68	295.28	297.96	602.38	815.33	589.82	671.51	True	False	497.8202118805496	704.6047445274139	234.31610873218946	496.01641851765527	334.11449564690804	355.53655303858613	737.4790489780519	786.6543817665566	562.3993969391316	549.8930319350592	0.9053037281246015	1.2813487416778646	0.42611216204656605	0.9020234658587807	0.6075990715342725	0.6465558433927819	1.341131831372517	1.4305589197927104	1.0227432687409457	1.0	9.10300719512904	-8.76488934266066	24.998403242538583	1.2344884632731266	0.7965414644177652	0.39035812009877024	0.245569562610689	90.73309693387615	657439.4771824197	0.10164385328141648	0.07165386796339555	1.7183461624454842e-09	8.76488934266066	-0.43794699885536137	
QNQENLK	ddPTM_K562_Methotrexat_30min_R1	1	QNQENLK	7	0	H3BNA9;H0YKS7	H3BNA9	LRRC49		0		92.46700000000001	0.021557	4315000.0	2699.3	2458.6	3334.6	3656.0	2950.7	2567.8	2826.7	3338.6	3234.4	3614.8	False	True	2580.642004050559	2864.841860945444	2634.7130300052563	3335.484156306187	3338.7687696604303	3063.991008499399	3460.6594305027693	3221.179545663506	3084.0334499676637	2960.124691871828	0.8718017896802503	0.9678112103898798	0.8900682586919004	1.126805288123522	1.1279149080538116	1.0350884937086524	1.1690924507353875	1.0881904922817967	1.041859303574635	1.0	11.531442233677188	-7.259445525260778	24.9997914429807	1.0911308002398	0.9156854904594067	0.6942401795744377	0.05280602797930879	93.90648247311839	1177430.251662989	0.013991669985226529	0.02277884156835902	5.502429346516256e-08	7.259445525260778	-0.1754453097803932	
QNTAWDTETS(ph)PRGER	ddPTM_K562_Methotrexat_30min_R1	1	QNTAWDTETSPRGER	15	1	Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7	Q8NDV7-2	TNRC6A	Trinucleotide repeat-containing gene 6A protein	1	QNTAWDTET(0.003)S(0.997)PRGER	168.16	3.1901e-05	15549000.0	3100.6	2571.5	3474.9	2658.2	2443.3	2361.0	2407.7	2863.0	3362.6	3078.1	True	False	2964.301336553612	2996.3966669735655	2745.5659773181974	2425.1597331217463	2764.636775989199	2817.229835293669	2947.6880145829127	2762.306667236152	3206.2734599496857	2520.626262601161	1.176017793885318	1.1887508717303583	1.0892396140016845	0.9621258689176323	1.096805510998775	1.1176705873033426	1.169426843764234	1.0958810944013526	1.2720146209382786	1.0	11.299566507950507	-8.539274773530835	7.0648414806478295	1.142625871045698	1.0995896159352603	0.025674470474946864	0.08531750511565818	0.5697056242805918	132.4202109369231	0.03319244602532701	0.026219527732213147	2.88885155818259e-09	8.539274773530835	-0.04303625511043774	
QPAQELS(ph)PTPGGTAHQALK	ddPTM_K562_Methotrexat_30min_R1	3	QPAQELSPTPGGTAHQALK	19	0	I3L2J8;Q9UPN4-3;Q9UPN4-2;Q9UPN4	I3L2J8	CEP131	Centrosomal protein of 131 kDa	1	QPAQELS(0.973)PT(0.027)PGGTAHQALK;QPAQELS(0.977)PT(0.023)PGGTAHQALK;QPAQELS(0.994)PT(0.006)PGGTAHQALK	124.0	3.4212e-05	178276000.0	8467.0	5999.799999999999	10117.2	9308.199999999999	6142.1	5681.7	5605.6	7371.1	7473.2	10034.2	True	False	8094.8008180995375	6991.164970837252	7993.737979718457	8492.164557912809	6949.893808293392	6779.6081131673145	6862.79849422518	7111.854235020746	7125.7725631642215	8216.909146614003	0.9851393843675655	0.8508266120622922	0.9728400104085962	1.0334986558068775	0.8458039007474338	0.8250800869522859	0.8352043781636771	0.865514527193157	0.8672083913816409	1.0	13.004380099807445	-7.791222085565796	24.99981791524473	0.8621116083193181	0.9536129647133208	0.30493901428080983	0.06302571917312964	240.14183224770457	201575.45576750016	0.01932965534155763	0.021920682941418888	1.6172528101047113e-08	7.791222085565796	0.0915013563940027	
QPASAQSTPSTTPHSS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	QPASAQSTPSTTPHSSPK	18	0	A0A087WT18;Q96A73-2;Q96A73	A0A087WT18	KIAA1191	Putative monooxygenase p33MONOX	1	QPASAQSTPSTTPHS(0.104)S(0.896)PK;QPASAQSTPSTTPHS(0.239)S(0.761)PK	221.25	2.1198e-35	9947200.0	6635.2	4186.5	7224.299999999999	6680.799999999999	4301.1	4285.8	3840.7	5140.2	5442.6	7289.700000000001	True	False	6343.524552764146	4878.247966667246	5708.01815590085	6095.104636611149	4866.770039375899	5113.970194028635	4702.074742537939	4959.416252506907	5189.574713948185	5969.464691362748	1.0626622118969273	0.8172002380256324	0.9562026833259962	1.0210471041784013	0.8152774647310763	0.8566882389685739	0.7876878389684416	0.8307974850211801	0.8693534483011532	1.0	12.543385849026121	-7.773583756790203	24.97372269053164	0.8477293424129994	0.9531956956055063	0.2793857804001546	0.07985585297693824	278.38038757880366	572460.1423905657	0.023821709885348676	0.02721082090244574	1.6842875685718292e-08	7.773583756790203	0.10546635319250697	
QPEDDSSQAFIST(ph)QNGSPR	ddPTM_K562_Methotrexat_30min_R1	1	QPEDDSSQAFISTQNGSPR	19	0	Q5TCQ9-3;Q5TCQ9-2;Q5TCQ9;Q5TCQ9-1	Q5TCQ9-3	MAGI3	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3	1	QPEDDS(0.017)S(0.011)QAFIS(0.045)T(0.667)QNGS(0.26)PR	93.851	0.0039867	13384000.0	657.28	563.39	749.72	540.42	361.15	437.92	596.35	483.08	757.64	610.58	True	False	628.3867582048497	656.4806215073834	592.3640175300011	493.0422176561788	408.6475552115985	522.5418422159267	730.0966679804454	466.0898025876495	722.4174817689527	499.9980453588308	1.2567784295114173	1.3129663757710306	1.1847326665144913	0.9860882902098947	0.8172983054730278	1.0450877699750147	1.4601990442912254	0.9321832493428118	1.444840611827791	1.0	8.96577864474882	-6.983327733707028	5.339503825536772	1.0952679276712651	1.2797154368382861	0.12701113810524078	0.19609335722447227	0.35999490645444343	31.292685917983366	0.053256177833954574	0.10913486355883077	1.039135701965567e-07	6.983327733707028	0.18444750916702102	
QPEDDSSQAFISTQNGS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	QPEDDSSQAFISTQNGSPR	19	0	Q5TCQ9-3;Q5TCQ9-2;Q5TCQ9;Q5TCQ9-1	Q5TCQ9-3	MAGI3	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3	1	QPEDDSSQAFIST(0.013)QNGS(0.987)PR	119.37	6.498999999999999e-07	0.0	730.04	544.69	598.19	722.74	506.45	352.03	545.88	535.08	529.87	566.79	True	False	697.9483157252138	634.6907643530355	472.63809375002813	659.3785063262394	573.0570520196986	420.0548152979375	668.3074857334883	516.260933113769	505.23645935393466	464.1388386926064	1.503749002542441	1.3674588537792753	1.0183118807324174	1.420649278529647	1.2346673112594817	0.9050197490069019	1.4398870122913812	1.1122984979407908	1.0885459634817305	1.0	8.858412615670643	-3.0000000000000004	0.5569522832056643	1.144573219238997	18.109415482415542	0.3124026794924101	0.16729941897503128	179.80055707233555	1.6134302352528582	0.08047706769440731	3658.0591480206285	0.000999999999999999	3.0000000000000004	16.964842263176546	
QPEKEEEEEAGES(ph)VEDIFSEVVGR	ddPTM_K562_Methotrexat_30min_R1	1	QPEKEEEEEAGESVEDIFSEVVGR	24	1	Q8TDD1-2;Q8TDD1	Q8TDD1-2	DDX54	ATP-dependent RNA helicase DDX54	1	QPEKEEEEEAGES(0.921)VEDIFS(0.079)EVVGR	57.351000000000006	0.008359	4927200.0	370.85	190.69	598.17	326.39	285.31	266.33	169.18	496.91	454.83	429.53	True	False	354.5478780432521	222.19828132420335	472.62229147671195	297.77589545316624	322.8332658934548	317.79450319092024	207.1229215878793	479.4333936487307	433.68505257506587	351.73795476920066	1.0079886837230723	0.6317153958264267	1.3436772604959046	0.8465844854546828	0.9178232303798087	0.9034978991660054	0.588855762591179	1.3630413981434553	1.2329776946011877	1.0	8.458357209136222	-9.281662259615128	24.9837642283248	1.2235071592791167	0.8986048384348282	0.30348265179471956	0.21209507436516445	983.1126163000155	1214550.3905793577	0.11236218799842286	0.05408167917506282	5.228026019733217e-10	9.281662259615128	-0.3249023208442885	
QPEYS(ph)PESPR	ddPTM_K562_Methotrexat_30min_R1	1	QPEYSPESPR	10	0	Q9H6F5	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	1	QPEYS(0.728)PES(0.272)PR	144.28	4.0207999999999996e-07	65545000.0	1744.3	1549.8	1638.5	1396.0	1605.2	1514.7	1698.6	1779.4	1534.2	1767.8	True	False	1667.622660565847	1805.8781079041921	1294.6012414273418	1273.614847429824	1816.3119358318093	1807.3943377887854	2079.554288977255	1716.817493426479	1462.875376867545	1447.6342896677586	1.1519640509127322	1.2474684530432425	0.8942874942016338	0.8797904667774392	1.2546759556577405	1.2485158376592433	1.4365190876036282	1.1859469658048094	1.0105282717524495	1.0	10.499481470563195	-7.796121316203336	24.99976586866203	1.2139770760440427	1.0473059238245361	0.16346901092621557	0.15583071278786542	307.95652816539007	221982.41000788187	0.05141516936295185	0.05830186974224442	1.5991112690672095e-08	7.796121316203336	-0.16667115221950657	
QPEYSPES(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	QPEYSPESPR	10	0	Q9H6F5	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	1	QPEYS(0.003)PES(0.997)PR	169.09	7.2063e-05	31167000.0	1203.9	1096.5	1492.9	919.02	1208.4	1306.7	891.77	1276.1	1387.5	1302.3	True	False	1150.9779975091571	1277.6779876867636	1179.560691685614	838.4509434705992	1367.325780749538	1559.2012815663868	1091.7721230903367	1231.2188396996346	1322.9954278475554	1066.4408504549858	1.0792703571117934	1.198076749537169	1.1060723069473257	0.7862142031720586	1.2821393518132607	1.4620607236689873	1.0237530966903072	1.1545120755401934	1.2405708458027591	1.0	10.05858823428643														
QPEYSPES(ph)PRCQPKPSEEAPK	ddPTM_K562_Methotrexat_30min_R1	1	QPEYSPESPRCQPKPSEEAPK	21	2	Q9H6F5	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	1	QPEY(0.002)S(0.027)PES(0.659)PRCQPKPS(0.312)EEAPK	49.066	0.032192	0.0	1168.0	977.99	1424.7	1668.4	877.68	918.38	808.24	1046.7	1140.7	1486.4	True	False	1116.6561185237113	1139.5862245123371	1125.6749396774687	1522.133962358107	993.1103039128222	1095.8439373727238	989.5083942793921	1009.8869677247924	1087.6691059788875	1217.1985564895117	0.9173984906326441	0.9362369174992993	0.9248079811431886	1.250522319668248	0.8158983582571967	0.9003000632314391	0.8129391782497718	0.8296813714907608	0.8935839598066921	1.0	10.249348812695047														
QPGLRQPS(ph)PSHDGSLSPLQDR	ddPTM_K562_Methotrexat_30min_R1	7	QPGLRQPSPSHDGSLSPLQDR	21	1	Q96A00-2;Q96A00;A0A0B4J2A3	Q96A00-2	PPP1R14A	Protein phosphatase 1 regulatory subunit 14A	1	QPGLRQPS(0.729)PS(0.192)HDGS(0.068)LS(0.012)PLQDR;QPGLRQPS(0.95)PS(0.033)HDGS(0.017)LSPLQDR;QPGLRQPS(0.899)PS(0.101)HDGSLSPLQDR;QPGLRQPS(0.99)PS(0.008)HDGS(0.002)LSPLQDR;QPGLRQPS(0.95)PS(0.05)HDGSLSPLQDR;QPGLRQPS(1)PSHDGSLSPLQDR;QPGLRQPS(0.932)PS(0.018)HDGS(0.042)LS(0.008)PLQDR	141.29	4.8832e-13	884636000.0	7665.56	6492.599999999999	8681.449999999999	7934.889999999999	6738.299999999999	7081.85	7186.43	8452.0	9542.560000000001	10375.83	True	False	7328.591160882375	7565.391794669482	6859.332284033803	7239.250513411482	7624.504558444727	8450.317284656703	8798.169862789833	8154.738369360797	9098.928468440336	8496.666643151622	0.8625254430558689	0.8903952705696939	0.8072968579463426	0.8520106551722106	0.897352441688428	0.9945449950620016	1.035484882754724	0.9597573627221891	1.0708821294965292	1.0	13.052681248195661	-8.183335693142434	2.500232275285202	1.014180592454629	0.853017964581234	0.8471493731577322	0.03241878988272543	0.1078229501235151	1.321676821711055	0.011756455427575281	0.011447889355569028	6.556382868919421e-09	8.183335693142434	-0.16116262787339497	
QPGS(ph)S(ph)S(ph)SSAPGQPS(ph)T(ph)GVAR	ddPTM_K562_Methotrexat_30min_R1	1	QPGSSSSSAPGQPSTGVAR	19	0	Q68D10-2;Q68D10	Q68D10-2	SPTY2D1	Protein SPT2 homolog	5	QPGS(0.981)S(0.982)S(0.346)S(0.346)S(0.346)APGQPS(1)T(1)GVAR	43.81	0.033588	8399000.0	1552.2	1334.9	1777.2	1529.3	1303.0	1473.2	1168.1	1344.1	1222.6	1422.8	True	False	1483.9671465518015	1555.4695355796264	1404.1900068749896	1395.2286433914248	1474.3673388916318	1757.8750501290278	1430.0761597517535	1296.827241156867	1165.7615928550788	1165.1171327861114	1.273663483947947	1.33503275491287	1.2051921367915945	1.197500752611074	1.2654241341091768	1.5087539275347117	1.2274097766737437	1.1130445211596889	1.0005531289952163	1.0	10.186259285374243	-9.38149651766275	2.475242828684168	1.0072880052346078	1.2926360545393762	0.670597393671986	0.0831300684182833	0.19683624184802828	2.2678478578298065	0.06493953765714457	0.024979016142044314	4.154353823463699e-10	9.38149651766275	0.2853480493047684	
QPGT(ph)Y(ph)TLALR	ddPTM_K562_Methotrexat_30min_R1	1	QPGTYTLALR	10	0	A0A494C0I4;A0A494BZY1;F8WCQ9;A0A494C0I5;C9J1N1;P15882-3;P15882	A0A494C0I4	CHN1	N-chimaerin	2	QPGT(1)Y(1)TLALR	106.68	0.008378299999999998	7829400.0	176.34	0.0	198.19	0.0	0.0	134.17	60.071999999999996	0.0	0.0	63.998000000000005	True	False	168.58830474355412	0.0	156.59262742660036	0.0	0.0	160.0964536219193	73.54467517216625	0.0	0.0	52.40734204670056	3.2168833251135664	0.0	2.987990256919718	0.0	0.0	3.0548478012728864	1.4033277075305604	0.0	0.0	1.0	5.711697036275272	-6.2438004561963645	23.663429685219487	0.9932707641086993	3.2168872015512924	0.2584143518653984	1.1545619458619347	2602.250604793204	3490925.8535837214	0.29033932580764715	8.028223384987555	5.704263039061112e-07	6.2438004561963645	2.223616437442593	
QPGYQPPNPHPGPS(ph)SPPAAPASK	ddPTM_K562_Methotrexat_30min_R1	1	QPGYQPPNPHPGPSSPPAAPASK	23	0	Q9BUL9	Q9BUL9	RPP25	Ribonuclease P protein subunit p25	1	QPGYQPPNPHPGPS(0.959)S(0.04)PPAAPASK	112.74	3.0522e-06	15701000.0	3056.5	2294.0	3634.4	2633.7	2304.8	2371.1	1879.1	2654.0	2509.7	3347.1	True	False	2922.139919749762	2673.0445086670634	2871.5891070146663	2402.807610083041	2607.921598371016	2829.281517350623	2300.5360087231584	2560.6573156984787	2393.024594788476	2740.907755937863	1.0661212196650107	0.9752405942433555	1.047678128092307	0.8766466528753597	0.9514809802414008	1.0322425157217743	0.8393336126468723	0.9342369549471732	0.8730773918254863	1.0	11.420438060366692	-6.141650598612632	0.589721620081032	0.9224207576748676	1.1621390718817153	0.3035928348480411	0.06233677638095478	5.163783821604312	1.2382074093111601	0.03139656177782015	0.8727110039992497	7.216878626415167e-07	6.141650598612632	0.23971831420684764	
QPGYQPPNPHPGPS(ph)SPPAAPASKR	ddPTM_K562_Methotrexat_30min_R1	1	QPGYQPPNPHPGPSSPPAAPASKR	24	1	Q9BUL9	Q9BUL9	RPP25	Ribonuclease P protein subunit p25	1	QPGYQPPNPHPGPS(0.5)S(0.5)PPAAPASKR	62.823	0.010719	13545000.0	2647.4	2082.0	3599.9	3498.5	1874.7	2047.6	2002.4	2786.1	2638.4	3603.0	True	False	2531.0234659072544	2426.015112050927	2844.330185544268	3191.7919367716586	2121.255909608705	2443.269720773957	2451.489172405543	2688.1112838234867	2515.741359879632	2950.4617862161663	0.8578397719745346	0.8222492910718839	0.9640288170591739	1.0817940268479083	0.7189572559518285	0.8280973955291724	0.8308832142338867	0.9110815453979724	0.8526602078469745	1.0	11.526725057626546	-12.457605515535278	3.2148792347289743	1.002237885479252	0.8752901801003958	0.14482549116232124	0.09168887361738089	39134627.94880238	47943051.98143025	783973.7872600142	0.024696048674245772	3.4865386542439183e-13	12.457605515535278	-0.12694770537885613	
QPGYQPPNPHPGPSS(ph)PPAAPASK	ddPTM_K562_Methotrexat_30min_R1	2	QPGYQPPNPHPGPSSPPAAPASK	23	0	Q9BUL9	Q9BUL9	RPP25	Ribonuclease P protein subunit p25	1	QPGYQPPNPHPGPS(0.2)S(0.751)PPAAPAS(0.049)K;QPGYQPPNPHPGPS(0.245)S(0.731)PPAAPAS(0.024)K	64.538	0.005203	30120000.0	3503.1	2770.8	4868.1	3756.5	3120.1	2490.8	2494.7	3151.7	3290.8	3959.2	True	False	3349.107918493502	3228.6276044527895	3846.3523365226997	3427.1734773425023	3530.4478388916223	2972.1118482632246	3054.199979224982	3040.8529245994355	3137.8114262780073	3242.1505145675956	1.0329896479035525	0.9958290307454744	1.1863583504961632	1.057067974464345	1.088921634892844	0.9167100154385072	0.9420290530935821	0.9379123242231686	0.9678179381799911	1.0	11.662735353179396	-8.256915483957805	24.9755048134604	0.9483343342610666	1.0734864079524116	0.5856061598922508	0.05011583575825564	270.2843711125614	1492185.7966875331	0.01712845820116329	0.016579043023431623	5.5345780460210345e-09	8.256915483957805	0.12515207369134496	
QPLIRSMR	ddPTM_K562_Methotrexat_30min_R1	1	QPLIRSMR	8	1	O14980	O14980	XPO1	Exportin-1	0		27.525	0.034232	2471400.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	False	True	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
QPLLLS(ph)EDEEDTKR	ddPTM_K562_Methotrexat_30min_R1	4	QPLLLSEDEEDTKR	14	1	Q99613-2;Q99613;H3BPE4;B5ME19	Q99613-2	EIF3C;EIF3CL	Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein	1	QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(0.999)EDEEDT(0.001)KR	145.8	1.319e-08	5527530000.0	14603.400000000001	10211.3	19113.4	14937.599999999999	10349.1	10664.400000000001	10032.199999999999	13362.800000000001	15490.900000000001	17961.7	True	False	13961.452021617433	11898.54376257716	15101.758540065519	13628.043800120147	11710.188048291166	12725.144369125714	12282.17622623196	12892.822749892852	14770.731440175638	14708.662077568386	0.9491993186048856	0.8089480674604096	1.0267255077602626	0.9265318441779794	0.7961422994515539	0.865146286046801	0.8350301449214089	0.8765462611011506	1.0042199190028243	1.0	13.844378402359586	-9.762923906619942	24.99545766937226	1.0021100293556555	0.8837111046800127	0.33761848181458787	0.0652747870397509	45.81714290346712	771310.737909376	0.05431150649644671	0.016901888818948253	1.7261403050983305e-10	9.762923906619942	-0.11839892467564284	
QPPGTQQSHS(ph)SPGEITS(ph)SPQGLDNPALLR	ddPTM_K562_Methotrexat_30min_R1	1	QPPGTQQSHSSPGEITSSPQGLDNPALLR	29	0	Q5TDH0-2;Q5TDH0;Q5TDH0-3	Q5TDH0-2	DDI2	Protein DDI1 homolog 2	2	QPPGT(0.003)QQS(0.009)HS(0.517)S(0.47)PGEIT(0.139)S(0.453)S(0.411)PQGLDNPALLR	70.178	0.00048294	21641000.0	693.95	704.74	672.21	670.11	766.52	593.93	670.28	769.07	671.53	849.34	True	False	663.4447889122685	821.1863064681895	531.1223072931788	611.3624967128935	867.3308155082225	708.698566741198	820.6073524170931	742.0213721869742	640.3107168738514	695.5162957271272	0.9538882021716981	1.180685932900653	0.7636374741413028	0.8790052806365161	1.2470316236105898	1.0189532166177204	1.179853523861996	1.0668641076356498	0.920626476773544	1.0	9.441940506827356	-7.726405900897231	24.999896966220533	1.078283289798665	0.9482838835652491	0.18985558558224724	0.12898178464713678	317.7957446147506	226777.8828711043	0.0387150686058562	0.0499788043464119	1.877561187725114e-08	7.726405900897231	-0.12999940623341588	
QPPGTQQSHS(ph)SPGEITSSPQGLDNPALLR	ddPTM_K562_Methotrexat_30min_R1	1	QPPGTQQSHSSPGEITSSPQGLDNPALLR	29	0	Q5TDH0-2;Q5TDH0;Q5TDH0-3	Q5TDH0-2	DDI2	Protein DDI1 homolog 2	1	QPPGT(0.001)QQS(0.008)HS(0.797)S(0.194)PGEITSSPQGLDNPALLR	101.08	1.8429e-08	32558000.0	226.07	397.35	438.81	484.55	311.22	424.07	393.7	350.42	393.53	407.86	True	False	216.1322334885747	463.00533370482043	346.70977769345853	442.07025381240777	352.1508850420982	506.0155257318873	481.99724689176077	338.0955299800534	375.23487619520625	333.99260175579366	0.6471168293919419	1.386274220658808	1.0380762204635998	1.323592952324248	1.0543673218833194	1.5150501031213623	1.4431374957346632	1.0122844883470195	1.123482598783933	1.0	8.383672335802077	-6.250945694046483	24.51036801142507	1.2211032731256708	0.6471164044067066	0.45823809903833035	0.1835241318958461	1040.168476946562	2429487.3543200274	0.04544326409762269	0.6187601068110943	5.611181361463864e-07	6.250945694046483	-0.5739868687189642	
QPPGTQQSHSS(ph)PGEITSSPQGLDNPALLR	ddPTM_K562_Methotrexat_30min_R1	1	QPPGTQQSHSSPGEITSSPQGLDNPALLR	29	0	Q5TDH0-2;Q5TDH0;Q5TDH0-3	Q5TDH0-2	DDI2	Protein DDI1 homolog 2	1	QPPGTQQSHS(0.212)S(0.762)PGEIT(0.021)S(0.003)S(0.001)PQGLDNPALLR	76.818	0.00011599999999999999	163680000.0	281.82	189.49	278.48	266.64	142.52	161.52	281.15	239.19	238.23	264.5	True	False	269.43153024174	220.8000017207158	220.03085365437045	243.26408518530658	161.26387808045695	192.73145404347025	344.20504435768	230.7775521258174	227.15473929810676	216.5964869425967	1.2439330574791172	1.019407123529354	1.0158560591644497	1.1231211023740078	0.7445359818933526	0.8898180056565218	1.5891534032539625	1.0654722769671654	1.0487461846890815	1.0	7.758866033313781														
QPPGTQQSHSSPGEIT(ph)SSPQGLDNPALLR	ddPTM_K562_Methotrexat_30min_R1	1	QPPGTQQSHSSPGEITSSPQGLDNPALLR	29	0	Q5TDH0-2;Q5TDH0;Q5TDH0-3	Q5TDH0-2	DDI2	Protein DDI1 homolog 2	1	QPPGTQQSHSSPGEIT(0.483)S(0.483)S(0.034)PQGLDNPALLR	100.23	7.0954e-08	23357000.0	623.16	537.05	875.26	807.31	445.11	502.4	601.67	837.72	742.07	940.81	True	False	595.7666325507157	625.788384210831	691.5548871356083	736.5343857296352	503.6497668565267	599.4816896448704	736.6098134045357	808.2569127757837	707.5713276705123	770.4201923647047	0.7733009057331265	0.8122689285830567	0.8976333875842096	0.9560164609249644	0.6537338608826427	0.7781230237551786	0.9561143655173517	1.0491117974140114	0.9184226149352526	1.0	9.589501705835977	-8.85400668439835	5.328772297198496	0.9898013506079251	0.8154548379664341	0.5155067863094435	0.08054496577245221	0.18639774042508225	8.444082911372071	0.03652006554526127	0.02448520167993285	1.399565781135683e-09	8.85400668439835	-0.17434651264149092	
QPPGTQQSHSSPGEITSS(ph)PQGLDNPALLR	ddPTM_K562_Methotrexat_30min_R1	1	QPPGTQQSHSSPGEITSSPQGLDNPALLR	29	0	Q5TDH0-2;Q5TDH0;Q5TDH0-3	Q5TDH0-2	DDI2	Protein DDI1 homolog 2	1	QPPGTQQSHSSPGEIT(0.002)S(0.112)S(0.886)PQGLDNPALLR	166.65	3.8884e-35	26587000.0	295.8	318.84	497.64	397.76	402.27	384.45	430.51	525.12	463.34	499.79	True	False	282.7969861809194	371.52289064664626	393.19216465297643	362.8889983622398	455.1755559600433	458.73952146490905	527.0628264144575	506.65123195915066	441.7994245325307	409.2731879358805	0.6909736442965433	0.9077625937833278	0.9607083391804707	0.886666923363405	1.1121558151797477	1.1208638508144302	1.2878019913120493	1.2379292044865788	1.0794731674476217	1.0	8.676920346663326	-7.227390785077318	0.7612072447577087	1.1752422089103294	0.7306031711756706	0.6700186018671768	0.09667876836431658	0.5766415811759589	0.5706168870452343	0.047493329477965404	0.1768846410428032	5.923920409137684e-08	7.227390785077318	-0.44463903773465874	
QPS(ph)EEEIIK	ddPTM_K562_Methotrexat_30min_R1	2	QPSEEEIIK	9	0	B1AKZ5;Q15121;Q15121-2	B1AKZ5	PEA15	Astrocytic phosphoprotein PEA-15	1	QPS(1)EEEIIK;QPS(1)EEEIIK	97.463	0.0091304	25317000.0	2762.6	1992.3600000000001	3930.5	2615.2	2267.4	2051.2	1752.58	2396.0	2415.7	2807.3	True	False	2641.1594118438393	2321.563625670406	3105.541763460582	2385.9294763599382	2565.6028428264663	2447.5653698239603	2145.640678073563	2311.731321934272	2303.394634271236	2298.870766706812	1.148894252819337	1.0098713069443666	1.3508988014621395	1.0378702060654936	1.116027433983057	1.0646815842241348	0.9333454969055286	1.00559429238638	1.0019678651057469	1.0	11.166709650469517	-8.315883863339408	1.6201883692137982	0.9857012494182736	1.1421708830590684	0.3823256434948037	0.08757970842819639	0.40688216068871025	2.1217038521194813	0.03826930837597059	0.03339221906062281	4.8318799626220636e-09	8.315883863339408	0.1564696336407948	
QPS(ph)GAGLCDISEGTVVPEDR	ddPTM_K562_Methotrexat_30min_R1	5	QPSGAGLCDISEGTVVPEDR	20	0	H0Y332;Q5T5C0-3;Q5T5C0-2;Q5T5C0	H0Y332	STXBP5	Syntaxin-binding protein 5	1	QPS(0.997)GAGLCDIS(0.003)EGTVVPEDR;QPS(1)GAGLCDISEGTVVPEDR;QPS(1)GAGLCDISEGTVVPEDR;QPS(1)GAGLCDISEGTVVPEDR;QPS(0.993)GAGLCDIS(0.006)EGT(0.001)VVPEDR	241.25	1.9064999999999997e-70	245745900.0	2971.7799999999997	2270.94	2767.04	3081.8999999999996	2418.45	2289.81	2475.14	2808.0	2489.76	3080.62	True	False	2841.1441095089	2646.1742356200457	2186.276117838944	2811.714611958433	2736.518565420159	2732.2833753298573	3030.2531513123504	2709.241048410449	2374.011601036203	2522.689866181861	1.1262359862764366	1.0489494848707188	0.8666448250921603	1.114570066519519	1.0847621826625609	1.0830833436791896	1.2011992405149254	1.0739493128859858	0.9410635975754383	1.0	11.300747140194199	-6.259736438080837	21.5845239885502	1.0520898419777902	1.1262361476538014	0.065348603447418	0.08836470015797174	77.98729432513734	987796.0621395379	0.023035765762199557	0.14096592784065337	5.498744770036598e-07	6.259736438080837	0.07414630567601121	
QPS(ph)PIVPALQNK	ddPTM_K562_Methotrexat_30min_R1	2	QPSPIVPALQNK	12	0	Q1MSJ5-2;Q1MSJ5-1;Q1MSJ5	Q1MSJ5-2	CSPP1	Centrosome and spindle pole-associated protein 1	1	QPS(1)PIVPALQNK;QPS(1)PIVPALQNK	141.65	2.2812e-06	20663200.0	2669.5	2261.8	3364.3	2898.3	1973.92	2112.1	1981.4099999999999	2737.7	2840.5	3185.0	True	False	2552.151976369047	2635.5240059734824	2658.1794058797695	2644.210538901045	2233.5250787298323	2520.2334329198447	2425.791630591323	2641.4135392568664	2708.4457749916974	2608.165636718982	0.9785237334771426	1.010489506061017	1.0191758408502398	1.0138200203524674	0.8563586021091667	0.9662858054100605	0.9300757576282304	1.0127476192730265	1.038448531358946	1.0	11.348819778343419	-11.949500805100309	4.592473409245685	1.0000003143299667	0.9790214529763027	0.011840117534949401	0.051075322785940555	1.7477650971816345e-07	3.992301640207322e-08	0.05258083940219968	0.012752535578851917	1.1233088872689338e-12	11.949500805100309	-0.020978861353664002	
QPS(ph)PSHDGSLS(ph)PLQDR	ddPTM_K562_Methotrexat_30min_R1	1	QPSPSHDGSLSPLQDR	16	0	Q96A00-2;Q96A00;A0A0B4J2A3	Q96A00-2	PPP1R14A	Protein phosphatase 1 regulatory subunit 14A	2	QPS(0.978)PS(0.022)HDGS(0.002)LS(0.998)PLQDR	163.11	6.1199e-08	71041000.0	1829.4	1583.8	1934.5	1687.6	1688.9	1440.7	1634.8	1524.1	1893.8	1952.2	True	False	1748.9817664617099	1845.4960300030054	1528.4748865066776	1539.6507281680308	1911.0199529194765	1719.0948850942782	2001.445514906403	1470.4965391318967	1805.7576513569015	1598.6376627952252	1.0940451405377296	1.154417960337646	0.9561108949692405	0.9631017484449507	1.1954053112811376	1.0753499214377529	1.2519694496668285	0.9198435476371343	1.1295603083687682	1.0	10.642627268305406	-10.473782045723041	0.9932581943696662	1.0014292362400365	1.0835292109381485	0.04871061158252832	0.10313113516331869	6.076546661128716	9.138538720488649	0.10094061171402523	0.03217043510079407	3.359061492277041e-11	10.473782045723041	0.08209997469811192	
QPS(ph)PSHDGSLSPLQDR	ddPTM_K562_Methotrexat_30min_R1	6	QPSPSHDGSLSPLQDR	16	0	Q96A00-2;Q96A00;A0A0B4J2A3	Q96A00-2	PPP1R14A	Protein phosphatase 1 regulatory subunit 14A	1	QPS(0.999)PS(0.001)HDGSLSPLQDR;QPS(0.997)PS(0.003)HDGSLSPLQDR;QPS(0.476)PS(0.476)HDGS(0.047)LS(0.001)PLQDR;QPS(0.651)PS(0.349)HDGSLSPLQDR;QPS(0.976)PS(0.024)HDGSLSPLQDR;QPS(0.996)PS(0.004)HDGSLSPLQDR	134.08	3.2502e-05	314273000.0	11184.800000000001	9691.310000000001	12494.199999999999	11091.36	9585.28	9851.45	9678.7	11710.16	12060.5	11710.0	True	False	10693.129584301369	11292.634253395914	9871.838163345425	10118.997689247317	10845.912330108351	11755.103287125712	11849.394852657564	11298.307035418127	11499.809987427352	9589.205527779988	1.1151215346592902	1.1776402352291941	1.0294740408625769	1.055248806580745	1.1310543192225544	1.2258683217364676	1.2357014163821802	1.1782318152100153	1.1992453341533176	1.0	13.227195576588333	-8.02075378960503	7.99084175283861	1.1827946510045737	1.095292791290531	0.17439396103905092	0.07174346238582655	0.2984271832802242	94.92487405806628	0.022806074863352704	0.02371750429233553	9.533364767346507e-09	8.02075378960503	-0.08750185971404267	
QPSPSHDGSLS(ph)PLQDR	ddPTM_K562_Methotrexat_30min_R1	2	QPSPSHDGSLSPLQDR	16	0	Q96A00-2;Q96A00;A0A0B4J2A3	Q96A00-2	PPP1R14A	Protein phosphatase 1 regulatory subunit 14A	1	QPSPSHDGS(0.012)LS(0.988)PLQDR;QPSPSHDGS(0.003)LS(0.997)PLQDR	203.89	7.3798e-16	21172100.0	914.3399999999999	914.6400000000001	1112.9	1145.08	756.65	845.71	836.93	773.86	866.9599999999999	976.5999999999999	True	False	874.1467083998026	1065.7687137782239	879.3174986783572	1044.692614251392	856.1627375075624	1009.1314883550225	1024.6328571021627	746.642905171976	826.655218830066	799.7282765525133	1.0930546462207062	1.3326635371360929	1.0995203301663146	1.3063094614521777	1.0705670445946065	1.2618429508397644	1.2812262453932142	0.9336207397725401	1.0336701140462734	1.0	9.643366088949856	-9.26447265393419	24.99445145611586	0.9877340610381298	1.2079406156833872	0.5458679610313637	0.09084193222453905	190.80421089814644	1572224.3309583606	0.04376112592343483	0.022436513070203428	5.439103788530969e-10	9.26447265393419	0.2202065546452574	
QPSS(ph)SSSEDSDEEWRR	ddPTM_K562_Methotrexat_30min_R1	1	QPSSSSSEDSDEEWRR	16	1	F5H3K2;F5H8B7;E7ENF1;G5EA44	F5H3K2	C12orf43		1	QPS(0.078)S(0.229)S(0.229)S(0.229)S(0.229)EDS(0.006)DEEWRR	75.998	0.024782	17551000.0	2022.0	1856.8	4647.6	2816.5	2101.5	1710.1	1267.6	1683.1	1830.8	2017.6	True	False	1933.1153010744383	2163.6046397964283	3672.132273211909	2569.581817898351	2377.8840849430258	2040.5526223361728	1551.8915675895248	1623.904419009839	1745.6865076059862	1652.1930890562687	1.1700298917111631	1.3095349775565746	2.222580579434228	1.5552551544481366	1.4392289259007076	1.235056989314569	0.9392918889861499	0.9828781089608672	1.056587464969437	1.0	10.690166586640613	-8.35226055770351	1.975001041324964	0.9932273469151325	1.5844372501119361	0.4965189321395641	0.2593570293270744	0.30128222824936784	2.314192601162109	0.11651494835430294	0.1003514472919916	4.443645881521083e-09	8.35226055770351	0.5912099031968037	
QPT(ph)PPFFGR	ddPTM_K562_Methotrexat_30min_R1	1	QPTPPFFGR	9	0	Q96PK6	Q96PK6	RBM14	RNA-binding protein 14	1	QPT(1)PPFFGR	96.756	0.022599	1243100000.0	3139.0	2680.5	3508.5	3092.1	2436.9	2640.6	2616.1	3233.6	2793.1	3667.2	True	False	3001.013318532474	3123.407064290352	2772.113796489367	2821.0203937949536	2757.3950638104525	3150.8585781772385	3202.8270195416208	3119.8724551780742	2663.2493906457703	3003.034544105445	0.9993269389534867	1.0400836282157266	0.9231041986948353	0.9393899245455698	0.918202912191886	1.0492248863277156	1.0665301955411541	1.0389066157437203	0.8868527323048523	1.0	11.552205355069297	-8.269665721045724	24.961051700359555	1.014373753984227	0.9646055860951853	0.1269991418545885	0.05693758468122192	1299.585098004472	3943296.7281390633	0.021049590019215914	0.018873813909360222	5.374453119471198e-09	8.269665721045724	-0.0497681678890417	
QPVSEPPADQVASDMPHS(ph)PTLR	ddPTM_K562_Methotrexat_30min_R1	3	QPVSEPPADQVASDMPHSPTLR	22	0	H7BYY2;Q6W2J9-4;Q6W2J9-2;Q6W2J9;H7C2V9;H7C231	H7BYY2	BCOR	BCL-6 corepressor	1	QPVSEPPADQVAS(0.001)DMPHS(0.727)PT(0.272)LR;QPVSEPPADQVASDMPHS(0.5)PT(0.5)LR;QPVSEPPADQVASDMPHS(0.839)PT(0.161)LR	146.36	1.6517e-15	270195000.0	5903.3	4407.0	5273.0	4880.5	4609.900000000001	4385.799999999999	4090.5	5570.7	4916.0	5766.1	True	False	5643.798000411835	5135.18184380809	4166.269359808587	4452.634142465085	5216.182652000413	5233.293778750941	5007.898751360803	5374.775323497183	4687.456233007988	4721.803415348606	1.1952632297368015	1.0875467257098768	0.8823470596564418	0.9429943923525989	1.104701359451939	1.1083252135698183	1.0605902683458233	1.138288668695109	0.9927258338987663	1.0	12.205122263203345	-6.515773573784393	24.937643238690235	1.0338237390952452	1.1683341631937088	0.3065368017350044	0.07546978718475154	384.39636214730695	1349136.9707491049	0.021050455973742534	0.061327390647044615	3.049484471630161e-07	6.515773573784393	0.1345104240984636	
QPVSEPPADQVASDMPHS(ph)PTLRVDR	ddPTM_K562_Methotrexat_30min_R1	3	QPVSEPPADQVASDMPHSPTLRVDR	25	1	H7BYY2;Q6W2J9-4;Q6W2J9-2;Q6W2J9;H7C2V9;H7C231	H7BYY2	BCOR	BCL-6 corepressor	1	QPVSEPPADQVAS(0.003)DMPHS(0.97)PT(0.027)LRVDR;QPVSEPPADQVAS(0.018)DMPHS(0.908)PT(0.075)LRVDR;QPVSEPPADQVAS(0.028)DMPHS(0.903)PT(0.069)LRVDR	68.406	0.0021987	166234000.0	3118.48	2845.3	3660.8199999999997	3398.1000000000004	2531.21	2760.3	2830.76	3219.88	3025.21	3453.0000000000005	True	False	2981.39535316252	3315.4374631693117	2892.463910065326	3100.1938488906044	2864.108481869445	3293.688909089841	3465.6299888527324	3106.6349953546437	2884.5686474080744	2827.6282397458826	1.0543802439285501	1.1725153316007582	1.022929347432628	1.0963937215343476	1.0129013572614627	1.1648238841276544	1.2256314108548394	1.0986716541046553	1.0201371619019157	1.0	11.465376740053141	-9.782867065909878	4.434677865204882	1.0041514075007434	1.1084259632220057	0.26875589183476944	0.06371229647342316	0.2769877305721661	12.15449752140751	0.06007116709710833	0.01698327097396929	1.6486669581556724e-10	9.782867065909878	0.10427455572126232	
QQAAYYAQT(ph)SPQGMPQHPPAPQGQ	ddPTM_K562_Methotrexat_30min_R1	4	QQAAYYAQTSPQGMPQHPPAPQGQ	24	0	Q96AE4	Q96AE4	FUBP1	Far upstream element-binding protein 1	1	QQAAY(0.001)Y(0.002)AQT(0.557)S(0.44)PQGMPQHPPAPQGQ;QQAAYYAQT(0.592)S(0.408)PQGMPQHPPAPQGQ;QQAAYY(0.001)AQT(0.562)S(0.437)PQGMPQHPPAPQGQ;QQAAY(0.001)Y(0.003)AQT(0.498)S(0.498)PQGMPQHPPAPQGQ	89.891	0.00069672	539004000.0	5693.68	5476.9	6222.59	6298.29	5604.76	5282.65	5371.42	6029.75	5150.02	6043.52	True	False	5443.392644619933	6381.864633617545	4916.553395723747	5746.128694426062	6341.884179835969	6303.44734833295	6576.097668019662	5817.680274805165	4910.596694287183	4948.979965093843	1.0999019359571633	1.2895313132463917	0.9934478277142346	1.1610733393456167	1.2814527891740441	1.2736861722602313	1.3287783976500631	1.1755311833627213	0.9922442056590681	1.0	12.272915486430902	-9.728285804151557	4.97644499565783	0.992731964327679	1.206058542391583	0.42452193616844036	0.09543744207731543	0.17719101364444578	10.36536820572045	0.07923767233150121	0.02574962077661668	1.8694514711775855e-10	9.728285804151557	0.2133265780639041	
QQAAYYAQTS(ph)PQGMPQHPPAPQGQ	ddPTM_K562_Methotrexat_30min_R1	1	QQAAYYAQTSPQGMPQHPPAPQGQ	24	0	Q96AE4	Q96AE4	FUBP1	Far upstream element-binding protein 1	1	QQAAY(0.002)Y(0.006)AQT(0.331)S(0.661)PQGMPQHPPAPQGQ	64.733	0.0035781999999999997	32074000.0	1484.0	1102.0	1702.2	1060.5	1279.3	1008.7	1099.9	1487.1	1227.7	1361.6	True	False	1418.7651368914267	1284.0867692027489	1344.9314819393476	967.52761153247	1447.5503734797117	1203.6169990939102	1346.580573676017	1434.7978501036953	1170.6244949682473	1115.0010458262361	1.272433906857994	1.1516462464402597	1.2062154443476139	0.8677369542873518	1.2982502383278487	1.0794761167259785	1.2076944490022214	1.2868130083595428	1.0498864546811193	1.0	10.122829347998355	-9.984374391583064	23.07680267684098	0.999999928701281	1.16432875628623	0.196532465159308	0.11982765556886141	121.52027230451858	179466.7184483605	0.11238813542514829	0.029018491783308297	1.0366343806907165e-10	9.984374391583064	0.16432882758494893	
QQASKS(ph)PYNGVR	ddPTM_K562_Methotrexat_30min_R1	2	QQASKSPYNGVR	12	1	Q9UK58-6;Q9UK58	Q9UK58-6	CCNL1	Cyclin-L1	1	QQAS(0.05)KS(0.95)PYNGVR;QQAS(0.001)KS(0.999)PYNGVR	180.95	7.016e-06	48123000.0	6443.9	5122.5	9293.2	7437.8	5684.6	5028.4	5197.0	5689.299999999999	6251.6	7647.7	True	False	6160.633871707996	5968.906057387552	7342.684319092203	6785.739621929467	6432.224539265824	6000.067134176484	6362.559543044149	5489.204094274064	5960.964480527405	6262.627422271819	0.983713936070809	0.9530993391304576	1.1724606661062689	1.083529190607332	1.0270808249570884	0.9580750585350821	1.015956900200855	0.876501781784555	0.9518312488666324	1.0	12.612552336999391	-8.207322760920311	2.9923020502159723	0.9545242541201872	1.0509135892818338	0.2945998033295304	0.0647596479136394	0.351511712167053	6.260443481719199	0.024972753640578677	0.02408853795869609	6.204077854151191e-09	8.207322760920311	0.0963893351616466	
QQDLHLES(ph)PQRQPEYSPESPR	ddPTM_K562_Methotrexat_30min_R1	2	QQDLHLESPQRQPEYSPESPR	21	1	Q9H6F5	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	1	QQDLHLES(0.867)PQRQPEY(0.09)S(0.042)PESPR;QQDLHLES(0.999)PQRQPEYSPESPR	96.31700000000001	7.491899999999999e-05	182804000.0	1589.3	1629.54	2703.8	1583.75	1891.79	1782.1599999999999	1545.52	2170.3999999999996	2253.7	2363.9	True	False	1519.4362749740874	1898.7937875559417	2136.30932961321	1444.905096430503	2140.593544161013	2126.5371974870664	1892.1422022254362	2094.0658018055674	2148.9259789117377	1935.774803340659	0.7849240894921887	0.9808960134614328	1.1035939335125549	0.7464221013399706	1.1058071116882442	1.098545757397606	0.9774598775436462	1.081771391068702	1.1101115559533234	1.0	10.918695412377474	-7.830693189726862	24.99999999999999	1.0639435314762553	0.9236953391626176	0.3619180763709611	0.1016300941072508	60.797332749223365	21946.17590893334	0.03128756845153828	0.035476780070498495	1.476749424469423e-08	7.830693189726862	-0.14024819231363772	
QQDLHLESPQRQPEY(ph)S(ph)PESPR	ddPTM_K562_Methotrexat_30min_R1	1	QQDLHLESPQRQPEYSPESPR	21	1	Q9H6F5	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	2	QQDLHLES(0.001)PQRQPEY(0.917)S(0.888)PES(0.194)PR	71.969	0.01763	21691000.0	2132.2	1830.1	2765.6	1911.8	2152.6	1978.7	1752.0	2584.3	2207.9	2510.4	True	False	2038.4710410241926	2132.4929186188283	2185.138354160179	1744.1954622609862	2435.704630620206	2361.0557709002887	2144.9305983092836	2493.408704204815	2105.2552109150406	2055.7422337266325	0.9915985611332551	1.0373347804180015	1.062943747669657	0.8484504689574447	1.184829785884576	1.1485174221576342	1.0433849940519884	1.2128994887091384	1.0240852069759014	1.0	11.00544366328049	-7.786761728500117	24.999982547721327	1.1122976100845199	0.9943756211693227	0.31484597275457205	0.0834767555805741	263.2622110278579	259909.22152968936	0.024910063414629303	0.02825592008529967	1.6339481519987252e-08	7.786761728500117	-0.11792198891519723	
QQDLHLESPQRQPEYS(ph)PESPR	ddPTM_K562_Methotrexat_30min_R1	5	QQDLHLESPQRQPEYSPESPR	21	1	Q9H6F5	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	1	QQDLHLESPQRQPEY(0.435)S(0.559)PES(0.006)PR;QQDLHLESPQRQPEY(0.155)S(0.841)PES(0.004)PR;QQDLHLES(0.002)PQRQPEY(0.439)S(0.557)PES(0.001)PR;QQDLHLESPQRQPEY(0.012)S(0.749)PES(0.239)PR;QQDLHLESPQRQPEY(0.115)S(0.774)PES(0.111)PR	100.62	6.8412e-05	1002772000.0	4731.74	3906.48	4780.83	4902.7699999999995	4613.46	4293.01	3887.9	4969.469999999999	4624.37	5888.9400000000005	True	False	4523.738375225502	4551.959421193426	3777.399116907581	4472.9517661414875	5220.210854399837	5122.57342448711	4759.860544044897	4794.6909233775905	4409.3840480543395	4822.395901004667	0.9380686422454562	0.9439207221134831	0.7833034023856527	0.9275372362542074	1.0824932173885375	1.0622465532993477	0.9870323054673421	0.9942549350580476	0.9143554653270414	1.0	12.235534380432519	-7.537917616070708	20.174473362641304	1.007941803793217	0.8875533448852465	0.4597438530503878	0.05877929787107209	21.968596480005495	29469.244726041663	0.01824290594236259	0.023578811965251276	2.8978932543453698e-08	7.537917616070708	-0.12038845890797056	
QQFYHS(ph)VQDLSGGSR	ddPTM_K562_Methotrexat_30min_R1	1	QQFYHSVQDLSGGSR	15	0	P10398;P10398-2	P10398	ARAF	Serine/threonine-protein kinase A-Raf	1	QQFYHS(1)VQDLSGGSR	99.796	0.0032998000000000003	15217000.0	575.76	449.84	388.43	748.59	344.09	326.0	447.65	545.38	603.44	850.23	True	False	550.4502797955579	524.1684140273723	306.90385121002276	682.9622769609541	389.3438661851277	388.9948861947207	548.0469077244013	526.198676275673	575.3862061119489	696.2451081028508	0.7905984162609645	0.75285040846555	0.4407985745799829	0.9809221910684728	0.5592051730834036	0.5587039415683156	0.7871465111155117	0.7557664250014979	0.8264132837927984	1.0	9.44345147572391	-10.012919897084016	1.0857287148178647	0.99748628360704	0.686755856755251	0.3067581738785071	0.1425467178793994	0.6706029261336102	1.7764755211088692	0.13285549860835658	0.04313062666096786	9.706889882817694e-11	10.012919897084016	-0.310730426851789	
QQIENGSGAEDNGDS(ph)SHCSNASTHSNQEAGPSNKR	ddPTM_K562_Methotrexat_30min_R1	2	QQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNKR	35	1	X6RFN3;Q99496-2;Q99496	X6RFN3	RNF2	E3 ubiquitin-protein ligase RING2	1	QQIENGS(0.188)GAEDNGDS(0.381)S(0.381)HCS(0.026)NAS(0.011)T(0.013)HSNQEAGPSNKR;QQIENGS(0.049)GAEDNGDS(0.427)S(0.427)HCS(0.046)NAS(0.046)T(0.004)HSNQEAGPSNKR	78.025	4.0355e-08	24765000.0	3340.8799999999997	2766.9	4396.12	3772.22	2404.46	2380.35	1943.52	2817.85	3169.59	3517.12	True	False	3194.0189154567606	3224.083195741455	3473.4344885343685	3441.515329349378	2720.688635204431	2840.318948937436	2379.403833576518	2718.744618327416	3022.2364527216823	2880.1354864103814	1.1089821748064996	1.1194206699490197	1.2059969070633678	1.1949143870445709	0.944639114389485	0.9861754637374471	0.8261430216750173	0.9439641402828195	1.0493382922372192	1.0	11.491920964723695	-7.766680629457279	24.99972655197973	0.9503531057619029	1.1580971535989166	0.7210212620782428	0.0605027259851094	68.79044446527253	328116.4694760815	0.0194879349475418	0.022754405594184842	1.7112732849624514e-08	7.766680629457279	0.20774404783701372	
QQLETLVLSS(ph)DLEDGSPRR	ddPTM_K562_Methotrexat_30min_R1	1	QQLETLVLSSDLEDGSPRR	19	1	Q9H257;Q9H257-2	Q9H257	CARD9	Caspase recruitment domain-containing protein 9	1	QQLETLVLS(0.209)S(0.791)DLEDGSPRR	160.2	9.4247e-14	12403000.0	1229.0	795.09	917.93	1231.6	906.33	858.84	934.04	900.73	934.12	812.28	True	False	1174.9746315630487	926.4651082807741	725.2690372556602	1123.627540182358	1025.528281087991	1024.7986750290615	1143.5222466009145	869.0508153613756	890.6929650889795	665.1682208458689	1.7664323019955441	1.3928282789917774	1.0903543111746432	1.6892381580609548	1.5417577823905448	1.5406609078916376	1.7191474438552419	1.3065128310793879	1.339049186619769	1.0	9.377575433680631	-10.032273245726955	1.4776384099803803	1.0079700748332936	1.5135626992940536	0.4126438787101585	0.18977376091989942	0.47195122043970794	2.3117084236033167	0.18577050540116555	0.05503428725466696	9.283820914002626e-11	10.032273245726955	0.50559262446076	
QQLETLVLSSDLEDGS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	QQLETLVLSSDLEDGSPR	18	0	Q9H257;Q9H257-2	Q9H257	CARD9	Caspase recruitment domain-containing protein 9	1	QQLETLVLSSDLEDGS(1)PR;QQLETLVLS(0.002)S(0.043)DLEDGS(0.955)PR	173.09	2.1953e-12	20901600.0	3823.6	3214.6	4517.9	4041.0	3770.8999999999996	3397.6	3706.9	4520.8	4308.5	4537.1	True	False	3655.5191222493677	3745.758011142611	3569.654530756538	3686.731804057249	4266.839446067887	4054.1381145251053	4538.266686571168	4361.800901586165	4108.198775409868	3715.3872246021	0.9838864433951042	1.0081743260404743	0.9607759070493199	0.9922873663463383	1.1484238891209637	1.0911751237340501	1.221478788676514	1.1739828550584772	1.1057256019525223	1.0	11.859296863636061	-7.756686803643299	23.66056091171809	1.1354497921428304	0.9860229525970982	0.5851001379542686	0.05605036824476998	39.09370258189987	194623.61562289298	0.01631747695163852	0.020350825129391133	1.751109065405048e-08	7.756686803643299	-0.14942683954573222	
QQLS(ph)AEELDAQLDAYNAR	ddPTM_K562_Methotrexat_30min_R1	1	QQLSAEELDAQLDAYNAR	18	0	E9PB61;Q86V81	E9PB61	ALYREF	THO complex subunit 4	1	QQLS(0.993)AEELDAQLDAY(0.007)NAR	144.75	7.7289e-12	31497000.0	1538.2	1423.6	1786.3	1489.1	1211.6	1364.1	1395.7	1315.9	1559.5	1640.7	True	False	1470.5825697886753	1658.825702937417	1411.3800412338483	1358.552914976899	1370.946636838912	1627.6930191969896	1708.7212534590572	1269.6190511407792	1486.9991853897386	1343.5533312919408	1.0945472245411985	1.234655643585294	1.0504830797276103	1.0111641148405586	1.0203886998074205	1.2114837433597252	1.2717926513687225	0.94497108642493	1.1067660291235797	1.0	10.39183787379384	-9.292200262339975	24.998151441730013	1.019401444035616	1.1235277755695856	0.23079279910219297	0.09222563786903717	1231.283824110233	1000608.5719742235	0.053749226568605785	0.02582343328179537	5.102696496258024e-10	9.292200262339975	0.10412633153396955	
QQLS(ph)PSPGQEAGILPETEK	ddPTM_K562_Methotrexat_30min_R1	1	QQLSPSPGQEAGILPETEK	19	0	E5RJM0;B7ZLQ8;Q17RY0-2;Q17RY0	E5RJM0	CPEB4	Cytoplasmic polyadenylation element-binding protein 4	1	QQLS(0.618)PS(0.382)PGQEAGILPETEK	189.84	2.1379000000000002e-13	16542000.0	11048.0	8276.4	16332.0	12486.0	9269.6	7806.4	7321.2	11146.0	10954.0	14009.0	True	False	10562.343148501672	9643.934425253748	12904.13638998555	11391.3717657656	10488.714876891696	9314.876317762175	8963.165465948588	10753.988862387061	10444.750930913246	11471.834350014506	0.9207196361311054	0.840661931737321	1.1248537937587315	0.9929860751302773	0.9143014584130944	0.8119779307788206	0.7813192897034166	0.9374253963467895	0.9104691204767996	1.0	13.485808476751242	-7.954822756347295	5.468963363777554	0.8760644738934156	0.9706274182954884	0.15450451230059759	0.08780925855442899	0.33288422613410185	23.340003417106637	0.029042955539380275	0.03270397742080466	1.1096275825119755e-08	7.954822756347295	0.0945629444020728	
QQLSPS(ph)PGQEAGILPETEK	ddPTM_K562_Methotrexat_30min_R1	1	QQLSPSPGQEAGILPETEK	19	0	E5RJM0;B7ZLQ8;Q17RY0-2;Q17RY0	E5RJM0	CPEB4	Cytoplasmic polyadenylation element-binding protein 4	1	QQLS(0.179)PS(0.821)PGQEAGILPETEK	200.45	2.0027e-20	19459000.0	4833.4	3202.4	6245.2	4293.1	3362.2	2895.7	2492.7	4186.4	4806.6	4827.1	True	False	4620.929523349745	3731.542168507151	4934.417865707678	3916.7305884677453	3804.3882324032566	3455.253042803844	3051.7514283136693	4039.1619391258905	4583.142215129411	3952.8654144446436	1.169007552461525	0.9440094152639934	1.2483141590594573	0.9908585741763801	0.9624380882033527	0.8741135051493496	0.7720352474338983	1.021831384485265	1.1594480799628535	1.0	11.948683120361306	-7.501516448090644	23.155726918296605	0.954130677215595	1.105598011116888	0.2550400880929339	0.11788666845698921	435.4469161375886	472003.142596803	0.03459833667443935	0.05064399954170775	3.151255030058299e-08	7.501516448090644	0.15146733390129297	
QQNSGRMS(ph)PMGT(ph)AS(ph)GSNSPTSDSASVQR	ddPTM_K562_Methotrexat_30min_R1	1	QQNSGRMSPMGTASGSNSPTSDSASVQR	28	1	Q5QPB1;O76080	Q5QPB1	ZFAND5	AN1-type zinc finger protein 5	3	QQNS(0.025)GRMS(0.252)PMGT(0.32)AS(0.318)GS(0.332)NS(0.505)PT(0.562)S(0.487)DS(0.149)AS(0.05)VQR	53.777	0.0042609	5578700.0	566.54	552.15	604.11	834.36	476.02	613.95	491.95	649.99	538.87	886.22	True	False	541.635579955842	643.3834025547169	477.315566651615	761.2129542274694	538.6249736448154	732.5871484026037	602.2823104099613	627.1294832821612	513.8180513183513	725.7169703526197	0.746345479137226	0.8865486530404579	0.6577158674127345	1.0489116078649814	0.7421970212204108	1.0094667457571591	0.8299134993595608	0.8641516030380885	0.7080143806871314	1.0	9.503263196560729	-7.241022811080558	24.995529454186443	0.8772372521734161	0.7758378991889388	0.1807819625532785	0.11763925605940494	1641.2299770672525	2009318.2306096188	0.03003550590973796	0.05194379005022643	5.7408630784551737e-08	7.241022811080558	-0.10139935298447733	
QQNSGRMS(ph)PMGT(ph)ASGSNSPTSDSASVQR	ddPTM_K562_Methotrexat_30min_R1	2	QQNSGRMSPMGTASGSNSPTSDSASVQR	28	1	Q5QPB1;O76080	Q5QPB1	ZFAND5	AN1-type zinc finger protein 5	2	QQNS(0.304)GRMS(0.505)PMGT(0.496)AS(0.558)GS(0.055)NS(0.035)PT(0.035)S(0.009)DS(0.002)AS(0.001)VQR;QQNS(0.065)GRMS(0.343)PMGT(0.529)AS(0.35)GS(0.181)NS(0.189)PT(0.232)S(0.097)DS(0.009)AS(0.006)VQR	52.674	0.010570999999999999	4984100.0	679.49	565.19	1149.04	842.36	721.72	786.49	474.97	686.03	562.3199999999999	836.55	True	False	649.6204331983529	658.5780409126145	907.8722065606787	768.5116066482706	816.6388302569982	938.4680614824726	581.4941131729227	661.9019360544945	536.1778659367475	685.042688664761	0.9482919005595829	0.9613678852572973	1.3252782951822197	1.1218448417370916	1.1920991841380506	1.3699409934754156	0.8488436163100022	0.9662199845452392	0.7826926333333024	1.0	9.420050082674187	-8.789135990281006	24.999126590348958	0.8966239216657501	1.1525937038139076	0.45011811940865354	0.13735581730762067	215.30902823769475	194337.06337423262	0.05975487653750273	0.04029664535145162	1.6250398286631782e-09	8.789135990281006	0.25596978214815747	
QQNSGRMS(ph)PMGTASGSNSPTSDSASVQR	ddPTM_K562_Methotrexat_30min_R1	9	QQNSGRMSPMGTASGSNSPTSDSASVQR	28	1	Q5QPB1;O76080	Q5QPB1	ZFAND5	AN1-type zinc finger protein 5	1	QQNS(0.049)GRMS(0.949)PMGT(0.003)ASGSNSPTSDSASVQR;QQNS(0.044)GRMS(0.949)PMGT(0.007)ASGSNSPTSDSASVQR;QQNS(0.077)GRMS(0.651)PMGT(0.221)AS(0.027)GS(0.012)NS(0.005)PT(0.005)S(0.002)DSASVQR;QQNS(0.049)GRMS(0.951)PMGTASGSNSPTSDSASVQR;QQNS(0.058)GRMS(0.876)PMGT(0.038)AS(0.008)GS(0.004)NS(0.005)PT(0.005)S(0.002)DS(0.002)AS(0.002)VQR;QQNS(0.066)GRMS(0.92)PMGT(0.013)ASGSNSPTSDSASVQR;QQNS(0.002)GRMS(0.972)PMGT(0.023)AS(0.003)GSNSPTSDSASVQR;QQNS(0.007)GRMS(0.991)PMGT(0.002)ASGSNSPTSDSASVQR;QQNS(0.004)GRMS(0.995)PMGT(0.001)ASGSNSPTSDSASVQR	140.07	5.7744e-22	227756900.0	9809.12	9079.3	12097.69	13959.29	9399.580000000002	9683.6	10170.869999999999	10419.059999999998	10721.639999999998	13616.51	True	False	9377.922829908648	10579.500003287216	9558.550193715673	12735.500718895884	10635.789525171924	11554.818650169327	12451.94650366778	10052.615754220566	10223.193296596368	11150.428092320364	0.8410370213828388	0.9487976529415616	0.8572361630042649	1.1421535221295411	0.9538458467345404	1.0362668190405604	1.116723627162244	0.9015452744046756	0.9168431213540034	1.0	13.444811479364246	-7.217994355041499	24.999641384831886	1.0087716202270234	0.8890009785368066	0.3603737077479764	0.07754204556804777	560.855210569521	322733.35349797277	0.021351496030239305	0.036981460902520254	6.053487430241015e-08	7.217994355041499	-0.11977064169021678	
QQNSGRMSPMGT(ph)AS(ph)GSNS(ph)PTSDSASVQR	ddPTM_K562_Methotrexat_30min_R1	1	QQNSGRMSPMGTASGSNSPTSDSASVQR	28	1	Q5QPB1;O76080	Q5QPB1	ZFAND5	AN1-type zinc finger protein 5	3	QQNS(0.008)GRMS(0.065)PMGT(0.827)AS(0.827)GS(0.152)NS(0.409)PT(0.409)S(0.195)DS(0.085)AS(0.024)VQR	58.277	0.0014575	3976700.0	510.18	513.16	526.45	637.12	474.2	447.77	573.66	425.11	276.69	673.31	True	False	487.7530980722831	597.9509677713994	415.9553393649214	581.2646787926143	536.5656117439844	534.2952153110741	702.317857891612	410.15864034535815	263.82674229271356	551.367034492702	0.8846250638126227	1.084488063965518	0.7544073427379109	1.0542245771501741	0.9731550458718736	0.9690372871179446	1.273775568642394	0.7438940210176586	0.4784956767236791	1.0	9.106869202868891	-9.493460589431347	24.580220813816382	0.6965634851080865	0.9940757787787556	0.3123162573449947	0.17324449217885743	541.454865216202	452412.9500124273	0.09000005871782886	0.04310986985522599	3.210254109315645e-10	9.493460589431347	0.2975122936706691	
QQPGS(ph)PRRISQQHS(ph)IY(ph)IS(ph)PHK	ddPTM_K562_Methotrexat_30min_R1	1	QQPGSPRRISQQHSIYISPHK	21	2	P28749;P28749-2	P28749	RBL1	Retinoblastoma-like protein 1	4	QQPGS(0.895)PRRIS(0.109)QQHS(0.998)IY(1)IS(0.999)PHK	48.477	0.020932	13384000.0	626.11	540.58	725.07	829.73	626.8	794.06	585.97	734.89	763.48	852.69	True	False	598.5869540829456	629.9016567110909	572.8877156678199	756.9888591389306	709.2351865059671	947.5008568459514	717.3886887507368	709.0435021603827	727.9859814436408	698.2595782649631	0.8572556291605992	0.9021024219621475	0.8204509232674365	1.0841080920363428	1.0157185215679765	1.356946451347368	1.0273954143719815	1.0154440042515642	1.0425721380758455	1.0	9.447619648355976	-7.26875017907347	24.359172141117426	1.0850857733142938	0.8641529328658769	0.49887871466106315	0.09967133922160022	325.9317351937569	1085986.53747431	0.028849657661121523	0.04382787863908717	5.385795026370155e-08	7.26875017907347	-0.22093284044841688	
QQPPEPEWIGDGES(ph)TSPSDKVVK	ddPTM_K562_Methotrexat_30min_R1	3	QQPPEPEWIGDGESTSPSDKVVK	23	1	Q5STZ8;Q8NE71;Q8NE71-2;A0A0G2JIC2	Q5STZ8	ABCF1	ATP-binding cassette sub-family F member 1	1	QQPPEPEWIGDGES(0.64)T(0.243)S(0.106)PS(0.011)DKVVK;QQPPEPEWIGDGES(0.373)T(0.373)S(0.224)PS(0.03)DKVVK;QQPPEPEWIGDGES(0.331)T(0.331)S(0.331)PS(0.007)DKVVK	88.85600000000001	0.00020292	325815800.0	5532.1	3426.44	9558.3	5905.599999999999	3727.3100000000004	3598.71	2666.35	4357.8	4670.5	8086.5	True	False	5288.915507949505	3992.6009704782796	7552.143451898053	5387.865217035504	4217.516597025455	4294.109775760137	3264.346861188331	4204.533703975445	4453.369474423071	6621.956490212882	0.7986937872162728	0.6029337366349753	1.1404701107686177	0.8136364569895106	0.6368988686740632	0.648465416845723	0.49295806549211996	0.6349382860170798	0.6725156652728028	1.0	12.693041816152009	-5.935281037783968	19.37535777928589	0.7263954056203067	2.096403837385243	0.005908565328457072	0.1868192325968421	997.0828598987563	488510.72614069894	0.04708125840189125	36743.9828864077	1.1606972679942628e-06	5.935281037783968	1.3700084317649361	
QQPPLGPSSS(ph)LLSLPGLK	ddPTM_K562_Methotrexat_30min_R1	2	QQPPLGPSSSLLSLPGLK	18	0	Q4KMP7;Q4KMP7-2	Q4KMP7	TBC1D10B	TBC1 domain family member 10B	1	QQPPLGPS(0.007)S(0.17)S(0.61)LLS(0.213)LPGLK;QQPPLGPS(0.002)S(0.21)S(0.788)LLSLPGLK	191.36	7.7503e-14	45037000.0	10553.8	7156.5	8642.2	10765.099999999999	6705.7	6167.6	6712.200000000001	7976.2	9946.8	11877.6	True	False	10089.867588763305	8338.98998529898	6828.320322650824	9821.340396895981	7587.617087034245	7359.4014113330095	8217.581713454092	7695.672525046805	9484.375439073196	9726.451543702786	1.037363682266613	0.8573517225506467	0.7020361220091305	1.009755752420792	0.7801012581969536	0.7566378527940871	0.84486944457914	0.7912106990374335	0.9751115703870115	1.0	13.247697853900553	-9.846983243558787	6.278112044513388	0.9957517991391666	0.8431516053213771	0.23900761483680122	0.09997370675215415	0.30411336942633305	17.289789955292612	0.0945053654862627	0.024619375247084536	1.4223836660804968e-10	9.846983243558787	-0.15260019381778944	
QQQQQQQQQQQQQQHSAVLALS(ph)PSQSPR	ddPTM_K562_Methotrexat_30min_R1	1	QQQQQQQQQQQQQQHSAVLALSPSQSPR	28	0	O14686;O14686-3	O14686	KMT2D	Histone-lysine N-methyltransferase 2D	1	QQQQQQQQQQQQQQHS(0.047)AVLALS(0.437)PS(0.437)QS(0.079)PR	76.109	0.00017829	10799000.0	664.17	708.49	735.59	807.53	457.2	710.36	617.44	721.53	826.03	837.92	True	False	634.973882054703	825.5559302290882	581.1997114321259	736.7350986712077	517.3298137691896	847.6270164333802	755.9166373402306	696.153380932903	787.6280455963356	686.1645683891891	0.9253959054536157	1.2031456712594886	0.8470267020585539	1.0737002937950233	0.7539442250474273	1.2353115498563756	1.1016550142115158	1.014557458959391	1.1478704699738984	1.0	9.422410820874381	-8.289989692406406	24.997788813337664	1.100899714547538	0.97408383829921	0.2213705320167011	0.12933576356673585	1230.4468585593474	1077337.2650952397	0.043867264533274435	0.038694137301587696	5.128735564450121e-09	8.289989692406406	-0.12681587624832813	
QQREDITQSAQHALR	ddPTM_K562_Methotrexat_30min_R1	2	QQREDITQSAQHALR	15	1	Q12906;Q12906-7;Q12906-5;Q12906-4;Q12906-2;Q12906-6;Q12906-3	Q12906	ILF3	Interleukin enhancer-binding factor 3	0	;	168.89	2.3839000000000003e-08	39138000.0	6050.7	5501.5	7760.0	8101.400000000001	6352.299999999999	5735.700000000001	5347.1	6616.6	6507.0	8079.2	False	True	5784.718472903614	6410.529365489037	6131.282046674501	7391.162840234934	7187.738792664096	6844.04284891736	6546.323288938108	6383.890427675422	6204.490990273181	6615.9785909513275	0.8743556819871474	0.9689465099322898	0.9267384956565993	1.117168494218501	1.0864211082083555	1.03447173457876	0.9894716554693077	0.9649200552744635	0.9378039703391818	1.0	12.691738850673946	-7.124776621327681	22.797580431246594	1.0196190639560847	0.9278814064336662	0.38973832284630183	0.05452654408100725	9.049788355040443	1613.4259272776092	0.016386596145915807	0.02838245877295478	7.50280015430796e-08	7.124776621327681	-0.09173765752241847	
QQS(ph)EEDLLLQDFSR	ddPTM_K562_Methotrexat_30min_R1	2	QQSEEDLLLQDFSR	14	0	C9JA28;Q9UNL2;Q9UNL2-2	C9JA28	SSR3	Translocon-associated protein subunit gamma	1	QQS(1)EEDLLLQDFSR;QQS(1)EEDLLLQDFSR	213.36	3.2614e-19	12333700.0	2425.6	2040.8400000000001	2854.3	2573.2	1914.46	2059.88	1872.1	2422.59	2309.57	2955.2	True	False	2318.9735283314317	2378.0541216513056	2255.2214363174	2347.6115511507305	2166.2450465191655	2457.9226569778566	2291.9660805335657	2337.3861365629173	2202.1985948064	2419.984643526508	0.958259604884154	0.9826732281184647	0.9319155980390817	0.9700935737053635	0.8951482615040143	1.0156769645430739	0.947099431669786	0.9658681689635746	0.9100051939161313	1.0	11.24078217729483	-8.269890327287078	24.976065721842	0.9643072980772078	0.9499418436361525	0.07142545431719471	0.03469002908435454	2599.247304625306	7681834.25939545	0.011772173204161594	0.010592149994712792	5.371674305398281e-09	8.269890327287078	-0.014365454441055303	
QQS(ph)LPLRPIIPLVAR	ddPTM_K562_Methotrexat_30min_R1	1	QQSLPLRPIIPLVAR	15	1	Q9NU19	Q9NU19	TBC1D22B	TBC1 domain family member 22B	1	QQS(1)LPLRPIIPLVAR	73.219	0.029104	6914600.0	1177.4	1077.4	1439.7	1471.6	1127.5	1028.8	1141.2	1293.8	1407.6	1590.0	True	False	1125.642905778953	1255.4220373312544	1137.5266446645978	1342.587112806395	1275.7860127400734	1227.601039623095	1397.1431499946093	1248.296320667179	1342.160983234752	1302.035592584986	0.8645254493728293	0.9641994769427249	0.8736524954791891	1.0311447094475354	0.9798395834995584	0.9428321672726987	1.0730452822881764	0.9587267258868737	1.0308174299368447	1.0	10.346553171371474	-6.053244275870642	0.5013811133718322	1.0092000057166772	0.7607323207995315	0.4494454800387393	0.04711738182570672	5.064765908560478	0.8418032557333992	0.027872251776576495	0.7760571887391086	8.846179023982972e-07	6.053244275870642	-0.24846768491714577	
QQSEEDLLLQDFSR	ddPTM_K562_Methotrexat_30min_R1	1	QQSEEDLLLQDFSR	14	0	C9JA28;Q9UNL2;Q9UNL2-2	C9JA28	SSR3	Translocon-associated protein subunit gamma	0		105.0	0.0056052	0.0	408.08	307.28	419.69	225.6	366.12	297.38	223.4	332.03	303.86	336.54	False	True	390.14129182119495	358.0527971330496	331.60280440319855	205.8219982665961	414.271197325406	354.8444762471964	273.5031367935468	320.3523167036045	289.73361492306884	275.5893448607238	1.4156617412707406	1.2992258365939393	1.203249728579973	0.7468430913779106	1.5032192102157236	1.287584164135686	0.9924300118778854	1.162426351662844	1.0513237188814146	1.0	8.106376299827971	-6.7021656680767645	2.9627310557461253	1.1238747318354625	1.3879267998314893	0.21790755547457163	0.18895219053736811	0.4196774052649201	7.216606150175957	0.05117686135521639	0.16569380603608608	1.9853374364550183e-07	6.7021656680767645	0.26405206799602676	
QQSQPAKESS(ph)PPREEAPPPPPPTEDSCAK	ddPTM_K562_Methotrexat_30min_R1	1	QQSQPAKESSPPREEAPPPPPPTEDSCAK	29	2	C9JR56;Q9UPW6-2;Q9UPW6	C9JR56	SATB2	DNA-binding protein SATB;DNA-binding protein SATB2	1	QQS(0.047)QPAKES(0.225)S(0.728)PPREEAPPPPPPTEDSCAK	48.025	0.010138	10381000.0	2072.6	2064.5	3920.8	2990.7	1638.7	1684.9	1294.5	1938.4	2029.6	3248.7	True	False	1981.4909856611673	2405.623534500067	3097.87766090224	2728.5099743612973	1854.2177730174344	2010.4830789861505	1584.8245773466713	1870.2253733044208	1935.2443389977648	2660.3289494533597	0.7448293137088634	0.9042579245677008	1.1644716573635705	1.0256287948608565	0.6969881575729333	0.7557272492182824	0.5957250428268724	0.7030053083054679	0.7274455060887924	1.0	11.377388930540189	-7.7653573432064915	24.999059844139758	0.7245565429763535	0.9704494898714674	0.357045454394761	0.1380747154495334	99.7770188404179	636639.4725816376	0.043000820678329124	0.05059094788820342	1.7164954509336787e-08	7.7653573432064915	0.24589294689511387	
QQSTPQAANS(ph)PPNLGAK	ddPTM_K562_Methotrexat_30min_R1	1	QQSTPQAANSPPNLGAK	17	0	F8WE62;Q9Y4C1	F8WE62	KDM3A	Lysine-specific demethylase 3A	1	QQST(0.001)PQAANS(0.999)PPNLGAK	153.36	6.864399999999998e-31	0.0	2006.3	1545.3	2614.7	2329.8	1554.4	1347.1	1445.9	1671.5	1708.9	2267.7	True	False	1918.1054542757888	1800.6345593911128	2065.910201989667	2125.550051247853	1758.8308454130117	1607.4080097941983	1770.1798813329874	1612.7123975847805	1629.453611999055	1856.9975555377173	1.0329068277746747	0.9696483196875917	1.1125002269545026	1.1446165046955987	0.9471368662645977	0.8655951134673157	0.9532483637655674	0.8684515457629663	0.877466751175785	1.0	10.858756200842295	-7.931279746045281	6.799149105843282	0.9071100106970514	1.0608983500344806	0.6070878030353866	0.05803505190264806	0.14904569629138523	11.874550140259487	0.018673287892306288	0.021195749084929928	1.1714405518397858e-08	7.931279746045281	0.1537883393374292	
QQTEKPES(ph)EDEWER	ddPTM_K562_Methotrexat_30min_R1	1	QQTEKPESEDEWER	14	1	A2AB15;A0A140T947;O60231	A2AB15	DHX16	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16	1	QQTEKPES(1)EDEWER	104.26	0.016885	0.0	747.33	651.26	898.24	790.4	602.25	763.82	481.31	924.6	540.8	868.0	True	False	714.4782680276751	758.8696454727601	709.7116991758895	721.106859175167	681.456431195307	911.4174048259255	589.2560195617817	892.0812939317308	515.6583260396093	710.7967889080295	1.0051793693740532	1.0676323490973885	0.99847341779103	1.0145049477263064	0.9587218763919896	1.282247498931589	0.829007711848324	1.2550440686461202	0.7254651879221288	1.0	9.473293353644234	-9.775782544434866	24.999973401586995	0.862732760787443	1.0461007468283954	0.2232566745251222	0.14045523200531934	383.2266818333433	667939.6813315937	0.12001017932812205	0.03156549532138746	1.675781746575746e-10	9.775782544434866	0.1833679860409524	
QQTST(ph)PVLTQPGR	ddPTM_K562_Methotrexat_30min_R1	2	QQTSTPVLTQPGR	13	0	A0A087WW76;A0A452Q6Z5;Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3	A0A087WW76	ARHGAP21	Rho GTPase-activating protein 21	1	QQTS(0.02)T(0.979)PVLT(0.001)QPGR;QQT(0.001)S(0.009)T(0.971)PVLT(0.019)QPGR	128.35	0.001251	31705000.0	3494.2	2698.1000000000004	3426.3	4128.2	2888.5	3057.9	3180.0	3291.9	3236.6000000000004	3474.5	True	False	3340.5991518369437	3143.9151651415027	2707.166453159902	3766.2871154439795	3268.3883794232383	3648.7958972234283	3893.1959489860296	3176.122011133318	3086.1311724478533	2845.234381406623	1.1741033264842746	1.1049758099672682	0.951473970246886	1.323717701450665	1.1487237750189905	1.282423662903842	1.3683217011673101	1.1162953856768423	1.084666765105705	1.0	11.474331786742324	-5.88053302233794	18.336691442394727	1.165053897299093	2.583004068989021	0.0	0.12877980162323982	9544.600217905776	1486277.8690504972	0.032003522296044085	8253.037308166638	1.316639795913503e-06	5.88053302233794	1.417950171689928	
QQVAFYGQTLGQAQAHS(ph)QEQ	ddPTM_K562_Methotrexat_30min_R1	1	QQVAFYGQTLGQAQAHSQEQ	20	0	Q96I24;Q96I24-2	Q96I24	FUBP3	Far upstream element-binding protein 3	1	QQVAFYGQTLGQAQAHS(1)QEQ	210.39	1.6151e-27	13809000.0	1192.6	1202.1	1526.8	1263.0	1061.0	1023.5	935.17	1317.8	1168.7	1650.3	True	False	1140.1747319789188	1400.7265927936692	1206.3455449565236	1152.274750934003	1200.5400971327877	1221.2768896328123	1144.9056778658062	1271.4522270638493	1114.3673920904055	1351.4146782660382	0.8436897647447819	1.0364891068009574	0.8926538717962952	0.8526433591889455	0.8883580417175626	0.9037025490945518	0.8471905006498835	0.94083055890381	0.8245932281275934	1.0	10.400254714678876	-6.956182301295566	24.99989836679232	0.8883587457091378	0.9462100151638313	0.07105561636260627	0.06414800367623544	258.9165452413066	147720.6218688484	0.015259556739374678	0.0317652786666146	1.1061593603608508e-07	6.956182301295566	0.057851269454693544	
QRAS(ph)LSSAPVVLVGDHA	ddPTM_K562_Methotrexat_30min_R1	2	QRASLSSAPVVLVGDHA	17	1	Q9HBH9	Q9HBH9	MKNK2	MAP kinase-interacting serine/threonine-protein kinase 2	1	QRAS(0.496)LS(0.217)S(0.288)APVVLVGDHA;QRAS(0.85)LS(0.115)S(0.035)APVVLVGDHA	137.45	3.7243e-06	28769000.0	2497.8	1697.71	2199.32	2624.6499999999996	1673.33	1827.17	1719.86	2189.2400000000002	2454.49	2632.08	True	False	2387.999702781272	1978.227721364063	1737.7127874861033	2394.5510095320105	1893.40222500962	2180.244742970578	2105.5823851644996	2112.2431883269555	2340.3812956378697	2155.3848066233263	1.1079226760080791	0.9178072125613609	0.806219280263204	1.1109621827961975	0.8784520607138666	1.0115338737987105	0.9768939535502951	0.9799842616669654	1.085829912341436	1.0	11.07372974518168	-9.62693965630084	7.106606171649575	1.042144323796198	0.968257044284577	0.08388124113473205	0.09076570772121408	0.5248324081946784	31.359766764932573	0.06044269658925303	0.022391320471959353	2.360806236161368e-10	9.62693965630084	-0.073887279511621	
QRDRDDRDFDFCR	ddPTM_K562_Methotrexat_30min_R1	1	QRDRDDRDFDFCR	13	3	A0A0A0MT33;Q9UPN6;Q9UPN6-2	A0A0A0MT33	SCAF8	Protein SCAF8	0		62.732	0.03108	23424000.0	453.43	426.08	459.55	538.63	508.25	325.08	579.91	377.72	325.35	568.24	False	True	433.4977601217519	496.4824778783183	363.096735122328	491.409144177024	575.0937835699705	387.89710921527575	709.9695794894614	364.4353735062659	310.22454951365916	465.3262296418188	0.9315996660137413	1.0669557103206535	0.7803057553876103	1.056052964294066	1.2358937599813455	0.833602501870261	1.5257458837769682	0.7831825293553452	0.6666818454494862	1.0	8.862098701408096														
QRDS(ph)QEDWTTFTHDR	ddPTM_K562_Methotrexat_30min_R1	2	QRDSQEDWTTFTHDR	15	1	O15357;O15357-2;F5GY16;A0A0A0MTP6	O15357;A0A0A0MTP6	INPPL1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	QRDS(1)QEDWTTFTHDR;QRDS(1)QEDWTTFTHDR	96.012	0.0034566	47551000.0	2098.45	2316.0	2642.3	2139.08	2132.12	2057.8	2108.8999999999996	2156.05	2285.2	2645.5	True	False	2006.2046506130825	2698.679634731002	2087.7173391659844	1951.5501775359498	2412.5311516482157	2455.4407264156334	2581.8745084329034	2080.220499439227	2178.9615507871963	2166.3743145808685	0.9260655636056254	1.2457125329484529	0.963691881460429	0.9008370180540656	1.113626179654448	1.1334332713830624	1.1917951994978404	0.9602313346489663	1.0058102776245126	1.0	11.081066823607095														
QRELEIEER	ddPTM_K562_Methotrexat_30min_R1	1	QRELEIEER	9	1	Q14152-2;Q14152	Q14152-2	EIF3A	Eukaryotic translation initiation factor 3 subunit A	0		102.06	0.022647	6538700.0	1240.9	1046.9	1509.6	1417.1	1607.9	1592.2	1275.7	1441.2	1600.4	1750.3	False	True	1186.351521811707	1219.8824307426119	1192.7555899046163	1292.865043189687	1819.367033157217	1899.870115948573	1561.8081987803382	1390.5121791200631	1525.9977533169213	1433.3037092462266	0.8277042152047512	0.8510983561077555	0.8321722620336242	0.902017510210452	1.269352072014117	1.3255181743356494	1.0896561480341749	0.9701448270522739	1.0646715999356775	1.0	10.485128625872951	-7.617079809326042	6.352730628166917	1.1263696243379178	0.8430634592859649	0.6194707600516853	0.10312953245740618	0.15474095850627057	8.702958862572652	0.034467286947634825	0.04463789884956961	2.4150169913906068e-08	7.617079809326042	-0.28330616505195283	
QRIDEFEAL	ddPTM_K562_Methotrexat_30min_R1	1	QRIDEFEAL	9	1	E7EQR4;P15311	E7EQR4	EZR	Ezrin	0		75.738	0.013280000000000002	0.0	2234.9	1600.3	2637.0	2210.8	1899.0	1802.9	2309.3	2431.8	2491.4	2274.1	False	True	2136.656471993699	1864.72237455096	2083.529736737198	2016.982596488435	2148.7517855373826	2151.2849089584724	2827.2193097463646	2346.2722156426375	2375.5753577941628	1862.2384535204503	1.1473592267168997	1.0013338361829087	1.1188307989228823	1.083095772550207	1.153854266877207	1.1552145241612841	1.518183294089796	1.2599203991342518	1.2756558395103912	1.0	10.862822101750767	-8.539119597811565	24.981416931924468	1.2924712341643754	1.1012875082470301	0.2662072985167504	0.12383173316190939	263.75757084342945	405703.8257891057	0.04508475777968437	0.03493145773912975	2.8898839445770014e-09	8.539119597811565	-0.19118372591734523	
QRLDS(ph)ISYCQLTR	ddPTM_K562_Methotrexat_30min_R1	1	QRLDSISYCQLTR	13	1	A0A494C0A7;Q5H9K5-2;Q5H9K5	A0A494C0A7	ZMAT1	Zinc finger matrin-type protein 1	1	QRLDS(0.766)IS(0.233)YCQLT(0.001)R	97.95700000000001	0.01671	1967600000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
QRPDLGS(ph)AQK	ddPTM_K562_Methotrexat_30min_R1	3	QRPDLGSAQK	10	1	A0A3B3ITP6;A0A3B3IS57;A0A3B3IU45;A0A3B3IT92;P33991;E5RFR3	A0A3B3ITP6	MCM4	DNA replication licensing factor MCM4	1	QRPDLGS(1)AQK;QRPDLGS(1)AQK;QRPDLGS(1)AQK	129.76	0.0034718	197716000.0	12938.0	8570.8	14160.4	13220.0	8460.8	9167.0	7488.3	10859.3	11379.4	15119.3	True	False	12369.261011523773	9986.979021309367	11188.325553315673	12061.023125374119	9573.543500302623	10938.393011493878	9167.741894588708	10477.372263890167	10850.374177764665	12381.04826098753	0.9990479603006719	0.8066343665566805	0.9036654504101962	0.9741520161405229	0.7732417561498968	0.8834787475920407	0.7404657264341747	0.8462427448008734	0.8763695891529643	1.0	13.595845847324966	-7.758668735103919	24.999992161020742	0.8414791498300478	0.9114856447771731	0.12953582036650113	0.081019820760198	141.54325719242695	1277155.7120232088	0.023344667059541458	0.02879807062339763	1.7431359706069798e-08	7.758668735103919	0.0700064949471253	
QRPSSTGPPLPPAS(ph)PSATSR	ddPTM_K562_Methotrexat_30min_R1	2	QRPSSTGPPLPPASPSATSR	20	1	O95155;O95155-4	O95155	UBE4B	Ubiquitin conjugation factor E4 B	1	QRPSSTGPPLPPAS(0.901)PS(0.08)AT(0.004)S(0.014)R;QRPSSTGPPLPPAS(0.822)PS(0.038)AT(0.038)S(0.103)R	77.689	0.0042417999999999996	12867100.0	2348.89	2000.38	3112.3	2844.8	2178.8	2012.35	2079.7	2464.9	2484.7	2617.2	True	False	2245.635608081471	2330.908794353716	2459.070762096011	2595.400800836935	2465.3503898519466	2401.2081571593444	2546.1256651277504	2378.208069881381	2369.1868393317636	2143.1997188134746	1.047795773939681	1.0875835667075215	1.147382924936837	1.2109934403471319	1.1503129494701605	1.1203846921409215	1.1880020526212764	1.1096530337350046	1.1054437990703923	1.0	11.0655505816743	-14.301928092770746	15.458426623623522	1.011499581309429	1.125471371079601	0.0	0.06017522537271579	0.0	0.0	0.0	0.013705071264904872	4.989670958575272e-15	14.301928092770746	0.11397178977017197	
QRQPPGTQQSHS(ph)SPGEITSSPQGLDNPALLR	ddPTM_K562_Methotrexat_30min_R1	2	QRQPPGTQQSHSSPGEITSSPQGLDNPALLR	31	1	Q5TDH0-2;Q5TDH0;Q5TDH0-3	Q5TDH0-2	DDI2	Protein DDI1 homolog 2	1	QRQPPGTQQS(0.006)HS(0.496)S(0.496)PGEIT(0.002)SSPQGLDNPALLR;QRQPPGTQQS(0.001)HS(0.98)S(0.016)PGEIT(0.002)S(0.001)SPQGLDNPALLR	122.38	6.2148e-21	49142000.0	3007.5	1982.6399999999999	2915.1000000000004	2765.38	1988.21	2222.47	2033.08	2526.7	2666.2	3024.3	True	False	2875.29390107882	2310.2375608821585	2303.260347198561	2522.9434289294322	2249.694464203939	2651.9308733778553	2489.049943385066	2437.8345288528076	2542.2489439474957	2476.569963933819	1.1609984546980705	0.9328375917200191	0.9300203025720417	1.0187248758044183	0.9083912415018117	1.0708079771610775	1.0050392194175786	0.984359240544336	1.0265201391320078	1.0	11.274127662829892	-8.292532671863242	24.96931734688468	1.015598614610968	0.985249942036877	0.03416552066677514	0.06943400748849021	2602.723916602567	2090094.4722368687	0.024018168329312268	0.021183614956072974	5.098792380468072e-09	8.292532671863242	-0.030348672574090907	
QRQPPGTQQSHSS(ph)PGEITSSPQGLDNPALLR	ddPTM_K562_Methotrexat_30min_R1	1	QRQPPGTQQSHSSPGEITSSPQGLDNPALLR	31	1	Q5TDH0-2;Q5TDH0;Q5TDH0-3	Q5TDH0-2	DDI2	Protein DDI1 homolog 2	1	QRQPPGT(0.001)QQS(0.009)HS(0.249)S(0.732)PGEIT(0.006)S(0.002)S(0.001)PQGLDNPALLR	62.858000000000004	0.00036739	21164000.0	266.11	377.93	299.65	365.61	325.09	308.44	314.36	320.43	440.16	303.71	True	False	254.41212303111706	440.37650878838	236.75755995953784	333.55753894614463	367.8450331544746	368.0416647174839	384.86323224001484	309.160295278547	419.69705767306687	248.7051759899282	1.0229466355835715	1.7706768949843406	0.9519607262581693	1.3411765059511778	1.4790405213334652	1.4798311424463015	1.5474677224071953	1.243079457626837	1.687528440059741	1.0	7.9582927226503966	-5.999441727603259	18.606689088054022	1.3923083356255384	0.6446444062978518	0.15795248085853975	0.25343054181489283	47528081.73998442	1669637218.9459996	0.059024226676701874	769513519.6326683	1.0012862962688789e-06	5.999441727603259	-0.7476639293276865	
QRQPPGTQQSHSSPGEITS(ph)SPQGLDNPALLR	ddPTM_K562_Methotrexat_30min_R1	2	QRQPPGTQQSHSSPGEITSSPQGLDNPALLR	31	1	Q5TDH0-2;Q5TDH0;Q5TDH0-3	Q5TDH0-2	DDI2	Protein DDI1 homolog 2	1	QRQPPGTQQSHSSPGEIT(0.095)S(0.452)S(0.452)PQGLDNPALLR;QRQPPGTQQSHS(0.001)S(0.012)PGEIT(0.135)S(0.426)S(0.426)PQGLDNPALLR	105.77	5.0813e-14	46708000.0	1188.8	1105.71	1106.61	1177.44	883.24	915.81	837.3399999999999	1254.3400000000001	1277.81	1578.1799999999998	True	False	1136.5417754289276	1288.4097836435312	874.3476837204215	1074.2156632935328	999.4015413681078	1092.7773212453603	1025.1348100389819	1210.2241512333196	1218.404892005682	1292.3563091231274	0.8794337655998902	0.9969462558802581	0.6765531127508267	0.8312070407443559	0.7733173385025749	0.8455696881201572	0.7932292377901129	0.9364477448595155	0.9427778418417582	1.0	10.335788167802281	-9.383957774138077	4.311656016149707	0.9625853336065269	0.827570832538412	0.3782477747872387	0.07786772011212012	0.26812568470755044	8.091550501060409	0.04764646491500218	0.021317675047566355	4.1308766398953577e-10	9.383957774138077	-0.13501450106811486	
QRQPS(ph)EGSSSREEEGPSTSCILESLFR	ddPTM_K562_Methotrexat_30min_R1	1	QRQPSEGSSSREEEGPSTSCILESLFR	27	2	P43355	P43355	MAGEA1	Melanoma-associated antigen 1	1	QRQPS(0.578)EGS(0.26)S(0.092)S(0.062)REEEGPS(0.003)T(0.003)S(0.003)CILESLFR	45.942	0.022724	6812400.0	208.02	0.0	259.51	141.07	0.0	63.104	56.863	133.96	0.0	355.8	True	False	198.87568987611505	0.0	205.04239741398177	128.7026121253046	0.0	75.29795490316464	69.6159752349662	129.2485508707492	0.0	291.3611722275082	0.6825744431067287	0.0	0.7037396089753347	0.44172876962757307	0.0	0.2584351041955877	0.23893360499183758	0.44360252219820834	0.0	1.0	8.186664821579553	-12.367040758962814	4.171728513805926	1.0015880076437385	0.3056906402669534	0.4083276726987375	0.2500080663290681	133528490.51629356	131978016.20858511	1732055.5803700243	0.05784991633641777	4.2949611624183265e-13	12.367040758962814	-0.695897367376785	
QRQS(ph)GVVVEEPPPSK	ddPTM_K562_Methotrexat_30min_R1	2	QRQSGVVVEEPPPSK	15	1	Q9NYV4-2;J3QSD7;Q9NYV4-3;Q9NYV4	Q9NYV4-2	CDK12	Cyclin-dependent kinase 12	1	QRQS(1)GVVVEEPPPSK;QRQS(1)GVVVEEPPPSK	130.95	2.9809e-08	0.0	3355.3	2559.3	3991.0	3038.9	2315.4	2317.7	2026.73	2703.0	2927.5	4046.3	True	False	3207.805029522782	2982.1808243381065	3153.343640242	2772.4843551966255	2619.915684167063	2765.562723108911	2481.2757942416506	2607.933957925014	2791.4011639810583	3313.475860551338	0.9681087669034737	0.9000158594310368	0.9516724349147083	0.8367299089770054	0.7906850070521196	0.8346409750662079	0.7488437817768754	0.7870689474378947	0.842438961820772	1.0	11.694129693743028	-7.328164788088579	4.8564421095791115	0.8189077635506935	0.9360236817040853	0.33711643917895884	0.06559168145992621	0.207277713227379	9.630140705278047	0.01761555806769465	0.02692399411423397	4.697158464661593e-08	7.328164788088579	0.11711591815339184	
QRS(ph)PIALPVK	ddPTM_K562_Methotrexat_30min_R1	1	QRSPIALPVK	10	1	Q8TF01-2;Q8TF01	Q8TF01-2	PNISR	Arginine/serine-rich protein PNISR	1	QRS(1)PIALPVK	90.61399999999999	0.010203	31176000.0	8887.5	7416.6	12250.0	9175.7	7309.8	6634.5	6656.7	9348.2	9956.4	10627.0	True	False	8496.81614159202	8642.067089354909	9678.892406154971	8371.280627193286	8271.166825656217	7916.523228401462	8149.634425665183	9019.418507389799	9493.52913716858	8702.34732226455	0.9763820986382964	0.9930731065220281	1.1122162846100128	0.961956621264214	0.9504523916776825	0.9096997551623119	0.9364869182840729	1.0364351333477622	1.0909159087318692	1.0	13.08718888256893	-6.378846188705186	0.0014473099325026351	1.982749674790079	8.744868268578156e-06	0.00554361117477431	0.062098301614913594	5408300.189233798	1269.0642587124228	860478.9429974788	878135.6777050797	4.179783731589072e-07	6.378846188705186	-1.9827409299218104	
QRS(ph)PIALPVKQEPPQIDAVK	ddPTM_K562_Methotrexat_30min_R1	1	QRSPIALPVKQEPPQIDAVK	20	2	Q8TF01-2;Q8TF01	Q8TF01-2	PNISR	Arginine/serine-rich protein PNISR	1	QRS(1)PIALPVKQEPPQIDAVK	83.89399999999999	0.0017833999999999999	79558000.0	5327.4	2958.9	6893.0	5354.5	3572.3	2584.9	2342.0	3709.3	3642.5	6593.0	True	False	5093.213874848647	3447.807932299466	5446.253498418471	4885.079298397556	4042.1200650211663	3084.3953414869125	2867.253117146315	3578.8418165487474	3473.1609700430404	5398.9438125237775	0.9433722690415971	0.6386078559109437	1.0087627668554267	0.9048212887612899	0.74868718871361	0.5712960624506089	0.5310766729031758	0.6628781370621063	0.6433037813778404	1.0	12.398461487221601	-7.972668158483493	4.589986599072266	0.6513153065165596	0.8649903901347541	0.2574131569743442	0.1491902656952967	0.2416115748644281	12.380677538092472	0.046456897057017596	0.05148826214923733	1.0649564335288277e-08	7.972668158483493	0.21367508361819454	
QRS(ph)PLLNQPVPELSHASLIANQSPFR	ddPTM_K562_Methotrexat_30min_R1	2	QRSPLLNQPVPELSHASLIANQSPFR	26	1	Q9NPI6-2;Q9NPI6	Q9NPI6-2	DCP1A	mRNA-decapping enzyme 1A	1	QRS(0.999)PLLNQPVPELS(0.001)HASLIANQSPFR;QRS(1)PLLNQPVPELSHASLIANQSPFR	143.48	3.9926999999999996e-18	51917000.0	1667.93	781.77	1263.55	1186.97	1181.03	1117.81	1319.6999999999998	2343.54	2210.8599999999997	2518.5699999999997	True	False	1594.6097943229915	910.9442046820623	998.3481224324177	1082.9101829898127	1336.356146010118	1333.8109623844198	1615.6763188292005	2261.1163698688815	2108.0776011611133	2062.432567557714	0.7731694211032036	0.4416843580785683	0.48406340073200016	0.5250645281809968	0.6479514370705467	0.6467173682986826	0.7833838275461524	1.0963346901307152	1.0221316489670502	1.0	11.010131235031231	-8.949334403438808	1.7203349473059995	1.054114480271909	0.5616424423866795	0.8260607927969843	0.09278822006121452	0.14263003651330178	0.8371083678255719	0.05739485477599322	0.029897417849902106	1.1237393700110476e-09	8.949334403438808	-0.4924720378852294	
QRS(ph)PS(ph)PAPAPAPAAAAGPPTR	ddPTM_K562_Methotrexat_30min_R1	4	QRSPSPAPAPAPAAAAGPPTR	21	1	Q9H7N4	Q9H7N4	SCAF1	Splicing factor, arginine/serine-rich 19	2	QRS(1)PS(1)PAPAPAPAAAAGPPTR;QRS(1)PS(1)PAPAPAPAAAAGPPTR;QRS(1)PS(1)PAPAPAPAAAAGPPTR;QRS(1)PS(1)PAPAPAPAAAAGPPTR	137.39	3.8624e-11	165093000.0	9772.9	8500.61	10783.900000000001	10529.7	8703.23	8744.53	8518.7	9682.9	9497.2	9791.5	True	False	9343.295017740047	9905.191316835371	8520.506760713037	9606.577549413909	9847.857294598478	10434.286663117557	10429.235324096624	9342.346918680038	9055.677244939685	8018.164468425083	1.1652660723702073	1.2353439937333857	1.0626505348282813	1.1981018333115858	1.2281934766215616	1.3013310844654007	1.300701097510054	1.1651478284674108	1.1293952974649306	1.0	12.969056294985357	-10.037848982798973	1.9917047418677418	1.0018281489687777	1.2112497444812749	0.4926863576549788	0.06533924629993532	0.33768622414622473	3.0475062602938165	0.06829515417313091	0.01911858966845542	9.165391428319326e-11	10.037848982798973	0.20942159551249717	
QRS(ph)PS(ph)PAPAPAPAAAAGPPTRK	ddPTM_K562_Methotrexat_30min_R1	2	QRSPSPAPAPAPAAAAGPPTRK	22	2	Q9H7N4	Q9H7N4	SCAF1	Splicing factor, arginine/serine-rich 19	2	QRS(1)PS(1)PAPAPAPAAAAGPPTRK;QRS(1)PS(1)PAPAPAPAAAAGPPTRK	85.84899999999999	0.0018229	42046000.0	4095.1000000000004	2877.2	5112.4	4410.4	2884.3	2773.8	2347.0	3971.8	3486.0	4394.299999999999	True	False	3915.0843073342867	3352.6083959620237	4039.3771050797304	4023.747079587748	3263.636005805936	3309.79759302735	2873.374494424595	3832.1095427623304	3323.9366208840206	3598.4496883623888	1.0879919538672207	0.9316813312145419	1.1225326056783087	1.1181890614174204	0.9069561306805924	0.919784318155522	0.7985034510048223	1.064933478201908	0.9237135179724312	1.0	11.813159772149648	-7.770928569270595	24.999977920986296	0.9312446823678493	1.0596713456474434	0.37884280460541875	0.08096764621873499	220.28912338400264	580366.1755777436	0.025428610613320444	0.029212378244822094	1.6946165001397645e-08	7.770928569270595	0.12842666327959407	
QRVEHFLEQR	ddPTM_K562_Methotrexat_30min_R1	1	QRVEHFLEQR	10	1	Q96HR9-2;Q96HR9	Q96HR9-2	REEP6	Receptor expression-enhancing protein 6	0		95.48299999999999	0.031018	6138800.0	2084.2	1736.4	2975.9	2319.1	2289.7	2269.8	2040.4	2272.2	2524.0	2591.0	False	True	1992.5810635506155	2023.31058624651	2351.2992580797227	2115.788103635032	2590.8356836992866	2708.406726026925	2498.0116397204692	2192.285438104781	2406.659790909716	2121.7447926966643	0.9391238147063454	0.9536069527357963	1.1081913650374995	0.9971925515820111	1.2210873299264349	1.2764997634727944	1.1773384095575334	1.0332465269390207	1.1342833498136855	1.0	11.051035421379849	-6.8716689614939	1.244338964712337	1.1413571568766578	0.917521617625094	0.3759492932693247	0.08755251788702713	0.6524259263083942	1.6663689031934732	0.029909350011297103	0.1439228904553969	1.3437888662985203e-07	6.8716689614939	-0.22383553925156385	
QRYDENEDLS(ph)DVEEIVSVR	ddPTM_K562_Methotrexat_30min_R1	3	QRYDENEDLSDVEEIVSVR	19	1	Q8NHM5-4;Q8NHM5-2;Q8NHM5-3;Q8NHM5;F5H0A1;S4R3G4;F8WBN2;F6SRV7	Q8NHM5-4	KDM2B	Lysine-specific demethylase 2B	1	QRYDENEDLS(0.996)DVEEIVS(0.004)VR;QRYDENEDLS(1)DVEEIVSVR;QRYDENEDLS(1)DVEEIVSVR	110.91	0.00032049	26149700.0	5263.949999999999	4146.219999999999	6237.299999999999	6172.92	4701.88	4869.19	4620.9800000000005	5680.5	5905.6	6115.25	True	False	5032.553060875758	4831.312381310182	4928.175967747793	5631.749687676583	5320.25963421933	5810.092054940102	5657.352395077186	5480.71359526195	5631.049945006502	5007.718967015931	1.0049591628490737	0.9647730659672243	0.9841159218813875	1.1246137662218907	1.0624117825425095	1.1602272597981471	1.129726414828819	1.0944531095617518	1.1244740334064731	1.0	12.289937885217562	-7.255426833980253	24.299257795863202	1.1056057373683552	0.9826317351083346	0.6002459541926575	0.04271411513111488	199.75199197313552	807278.9982850715	0.011051384777498655	0.018511009276468416	5.553581709776477e-08	7.255426833980253	-0.12297400226002064	
QS(ph)AGPNSPTGGGGGGGSGGTR	ddPTM_K562_Methotrexat_30min_R1	1	QSAGPNSPTGGGGGGGSGGTR	21	0	H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2	H7BZ52	ZSWIM8	Zinc finger SWIM domain-containing protein 8	1	QS(0.982)AGPNS(0.011)PT(0.006)GGGGGGGSGGTR	140.35	9.273799999999998e-13	576510.0	144.76	0.0	128.84	72.748	144.38	57.325	188.66	175.73	0.0	129.93	True	False	138.39652373072983	0.0	101.79824470277607	66.37029578855646	163.36850068240503	68.40224494206251	230.97180746405792	169.5494762952878	0.0	106.39841795255796	1.300738548503978	0.0	0.9567646461450859	0.6237902505105888	1.535441069765243	0.6428878009498451	2.1708199417687397	1.5935338095993898	0.0	1.0	6.733332889213755	-7.742166636249628	24.60825465652399	1.2117644958511524	0.6857601329614516	0.09962897752169142	0.6271275237623394	417.9596782122987	533665.7776117168	0.18263224551808446	0.235384747658516	1.810645225349421e-08	7.742166636249628	-0.5260043628897009	
QS(ph)PASPPPLGGGAPVR	ddPTM_K562_Methotrexat_30min_R1	2	QSPASPPPLGGGAPVR	16	0	A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160-2;Q14160;Q14160-3;H0YCG0	A0A0G2JMS7	SCRIB	Protein scribble homolog	1	QS(0.99)PAS(0.01)PPPLGGGAPVR;QS(0.886)PAS(0.114)PPPLGGGAPVR	149.59	8.4038e-10	186361000.0	2920.1	2474.3900000000003	3443.3	3123.7	2636.6	2388.58	2446.0	2121.75	2863.7	3028.0	True	False	2791.7359004290156	2883.2408900613345	2720.598385478648	2849.850070857121	2983.359114137896	2850.139279960079	2994.577764534537	2047.1268498806505	2730.567212055526	2479.599858080087	1.1258816180892228	1.1627847455572047	1.097192507336713	1.149318532815094	1.2031615118932382	1.149435168207702	1.2076858912442385	0.8255875814840975	1.101212844144038	1.0	11.275891611185488	-9.241482306861394	24.999265065246302	0.9725501352144272	1.1557027890015275	0.5871120388493409	0.06950045100903937	495.8390939495094	621115.3213050131	0.03039633441569453	0.017519691537865426	5.734792295893259e-10	9.241482306861394	0.18315265378710022	
QS(ph)PDTFS(ph)LMMAK	ddPTM_K562_Methotrexat_30min_R1	1	QSPDTFSLMMAK	12	0	O15055;E9PD89;O15055-2	O15055	PER2	Period circadian protein homolog 2	2	QS(0.578)PDT(0.423)FS(0.998)LMMAK	56.773999999999994	0.032325	4282200.0	371.52	379.97	682.54	518.4	468.67	566.81	508.57	536.01	678.15	698.25	True	False	355.18842564548703	442.75358411430875	539.284181460981	472.95267686792306	530.3083198145366	676.3380105645083	622.6297684829636	517.1582244866398	646.622954518789	571.7901588191613	0.6211866716611707	0.7743287940258821	0.9431505127242652	0.8271437861831104	0.9274526880800268	1.1828430415123883	1.0889130546926415	0.9044545739553383	1.1308745779293745	1.0	9.159341979479706	-5.815486685952948	0.5138328396866327	1.0554136353433126	0.10598184455921048	0.6877078362549482	0.09087445184203388	3.9707607506438114	0.5749041013827826	0.05559296927783626	2.497617918419018	1.5293726312582286e-06	5.815486685952948	-0.9494317907841021	
QS(ph)TCY(ph)KGLR	ddPTM_K562_Methotrexat_30min_R1	1	QSTCYKGLR	9	1	C9J6Z7;C9JXD7;Q15051-3;Q15051	C9J6Z7	IQCB1	IQ calmodulin-binding motif-containing protein 1	2	QS(0.955)T(0.045)CY(0.999)KGLR	112.85	0.013354	147070000.0	0.0	0.0	167.59	64.553	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	132.4151492528582	58.893738714998115	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
QSAGPNS(ph)PTGGGGGGGSGGTR	ddPTM_K562_Methotrexat_30min_R1	1	QSAGPNSPTGGGGGGGSGGTR	21	0	H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2	H7BZ52	ZSWIM8	Zinc finger SWIM domain-containing protein 8	1	QS(0.349)AGPNS(0.401)PT(0.247)GGGGGGGS(0.003)GGT(0.001)R	94.911	0.00026534	399590.0	171.43	0.0	153.23	159.26	0.0	121.25	145.31	195.99	64.098	172.5	True	False	163.8941424644861	0.0	121.0691170118471	145.29792306710152	0.0	144.6798464757973	177.89946646137102	189.09692061181048	61.11809797057485	141.25857844082392	1.1602420488263987	0.0	0.8570744399963319	1.0285953934328298	0.0	1.024219895688718	1.2593887636770797	1.338657961158989	0.43266822195990357	1.0	7.142194672865287	-8.474993554468167	24.99094938735326	1.0510303604318112	0.6023811527455082	0.18080668627275576	0.42362493177741056	622.1391189097761	324690.47885093105	0.1447821244212182	0.12768281942369294	3.3497041054593554e-09	8.474993554468167	-0.448649207686303	
QSCES(ph)SGDSADDPLSRGLRR	ddPTM_K562_Methotrexat_30min_R1	1	QSCESSGDSADDPLSRGLRR	20	2	Q9NWM0-3;Q9NWM0-2;Q9NWM0-4;Q9NWM0;Q9NWM0-6	Q9NWM0-3	SMOX	Spermine oxidase	1	QS(0.089)CES(0.416)S(0.416)GDS(0.079)ADDPLSRGLRR	77.468	0.01986	41297000.0	2479.4	2111.0	3016.6	2659.0	1948.5	2449.0	2094.6	2788.3	2837.3	3200.9	True	False	2370.408544749734	2459.8068691352114	2383.4568842781323	2425.8895983638263	2204.7619031698723	2922.2345898493004	2564.3673694170234	2690.2339085765143	2705.3945422932393	2621.1859926448305	0.9043267251546477	0.9384327842577915	0.9093047540183042	0.9254931184475215	0.8411314227058043	1.1148520547756726	0.9783233149470343	1.0263422420711217	1.0321261253053777	1.0	11.35600401190571	-8.25564760207815	24.999991208567025	1.0287247983206516	0.9071831717961402	0.7080699303208403	0.040605259191471746	268.26851860726055	1157971.829481265	0.013092099917437981	0.012761012534865094	5.550759334291559e-09	8.25564760207815	-0.12154162652451139	
QSFDDNDS(ph)EELEDKDSK	ddPTM_K562_Methotrexat_30min_R1	3	QSFDDNDSEELEDKDSK	17	1	A0A087WUT6;O60841	A0A087WUT6	EIF5B	Eukaryotic translation initiation factor 5B	1	QSFDDNDS(1)EELEDKDSK;QSFDDNDS(1)EELEDKDSK;QSFDDNDS(1)EELEDKDSK	132.6	1.7864e-05	168893000.0	3989.2	2348.0099999999998	7879.4	4514.8	2770.14	2268.06	2126.3799999999997	3636.7000000000003	3649.63	6492.1	True	False	3813.839544533207	2735.9787431540353	6225.621618372039	4118.994493679203	3134.4619648175485	2706.3304956527563	2603.27484339777	3508.7951996988186	3479.959497899298	5316.3177802647715	0.7173836670732773	0.5146379235098647	1.1710401589391033	0.7747833489129881	0.5895926643913753	0.5090610846663819	0.48967630435141474	0.6600047899175937	0.654580791016218	1.0	12.376211628235861	-3.390431632219556	17.878778393830807	0.6930855135142774	0.7785450871965653	0.0	0.21219652178688608	0.0	0.0	0.050020531247372296	0.0	0.00040697559593615927	3.390431632219556	0.08545957368228796	
QSFDDNDSEELEDKDS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	QSFDDNDSEELEDKDSK	17	1	A0A087WUT6;O60841	A0A087WUT6	EIF5B	Eukaryotic translation initiation factor 5B	1	QSFDDNDS(0.026)EELEDKDS(0.974)K	66.02199999999999	0.031567000000000005	104310000.0	1784.0	1144.7	3722.2	2321.6	1373.5	1059.9	791.43	1708.7	1695.8	2695.7	True	False	1705.5774961012846	1333.8422184268484	2940.9610868726563	2118.0689325165326	1554.139324610634	1264.7106744717323	968.9283238698149	1648.60405249962	1616.962628139737	2207.4826081329206	0.7726346245345302	0.604236796028489	1.3322691993302311	0.9594951845659098	0.7040324208602117	0.5729198815937305	0.43892908614547604	0.746825386721394	0.7324916727236901	1.0	11.108186356166982	-7.820179425795226	5.678718419172862	0.6645064484170423	0.9242921027496682	0.1838513595785205	0.21841209928990063	0.30656998308223027	19.870787746867595	0.07064564398002271	0.08147405149145279	1.5129360601121103e-08	7.820179425795226	0.2597856543326259	
QSFGGSLFAYS(ph)PGGAHGMLSSPK	ddPTM_K562_Methotrexat_30min_R1	2	QSFGGSLFAYSPGGAHGMLSSPK	23	0	Q99856;K7EJ04	Q99856	ARID3A	AT-rich interactive domain-containing protein 3A	1	QS(0.002)FGGS(0.004)LFAY(0.072)S(0.915)PGGAHGMLS(0.005)S(0.002)PK;QSFGGSLFAY(0.069)S(0.928)PGGAHGMLS(0.001)S(0.001)PK	83.939	0.0081056	19309700.0	3407.5	2216.7	4467.9	3219.5	2395.6	2654.5	2290.2	3481.8	3509.6000000000004	4531.6	True	False	3257.710380025296	2582.9719975424086	3530.148847466109	2937.251433596217	2710.66338990698	3167.444556453641	2803.8356485433324	3359.3431204969734	3346.4394620351577	3710.8833278981883	0.8778800334502661	0.6960531413434066	0.9512961027167498	0.7915235198892254	0.7304631136011155	0.8535554143243985	0.755570951925185	0.9052677822667294	0.9017905351205293	1.0	11.857546927328155	-9.797194120251435	1.407321626759748	0.9930700967617191	0.8075263166382051	0.4061091323917727	0.07289759557239928	0.3706742559247279	1.519494490849673	0.0653990325756222	0.020187703588153368	1.595165983129721e-10	9.797194120251435	-0.18554378012351402	
QSFPEMHEYMRR	ddPTM_K562_Methotrexat_30min_R1	1	QSFPEMHEYMRR	12	1	Q8TCU5	Q8TCU5	GRIN3A	Glutamate receptor ionotropic, NMDA 3A	0		42.083	0.033658999999999994	9303600.0	767.58	575.05	1086.5	928.21	705.43	569.4	468.24	816.1	683.07	822.78	False	True	733.8381022743408	670.0672383212708	858.4584979010106	846.8352704389948	798.206409727033	679.428491408816	573.2547393563577	787.3973004301168	651.3142247926705	673.7665690987888	1.089157782428864	0.99450947709907	1.2741185705447817	1.256867451247541	1.184692809550779	1.0084033886062356	0.8508209900101265	1.1686499991878752	0.9666763752672534	1.0	9.396105036471377	-8.269175270149375	21.350834533141352	1.0001951102958415	1.162418552048899	0.3761910653386207	0.1036025234699761	95.77825081232548	264341.97040940257	0.03819874787505019	0.03446249993878169	5.3805259442263e-09	8.269175270149375	0.16222344175305747	
QSFTMVADT(ph)PENLR	ddPTM_K562_Methotrexat_30min_R1	2	QSFTMVADTPENLR	14	0	C9J9W2;Q14847;Q14847-2;F6S2S5	C9J9W2	LASP1	LIM and SH3 domain protein 1	1	QSFT(0.002)MVADT(0.998)PENLR;QSFTMVADT(1)PENLR	99.796	0.010492	24624000.0	1630.67	1200.28	1399.6999999999998	1760.04	1177.08	1268.0700000000002	1296.92	1349.56	1247.08	1358.57	True	False	1558.9876993091266	1398.605868728381	1105.922098032255	1605.7400258383861	1331.8866517747986	1513.1065807881596	1587.7873239493574	1302.0952098621106	1189.1035229982917	1112.5198081875374	1.4013123072828275	1.257151430864787	0.9940695796095254	1.4433361222164476	1.1971801688139314	1.3600715867281847	1.4271991494120924	1.1704018214142362	1.0688380685423666	1.0	10.119615307859794	-9.648972431208815	2.966388318305541	1.0227095816388545	1.288664687537364	0.406445168685056	0.12671811050826623	0.27455950497186615	4.511459016728435	0.10980707714138534	0.03387627085586053	2.2440243687786753e-10	9.648972431208815	0.26595510589850946	
QSGLSSLVNGKS(ph)PIR	ddPTM_K562_Methotrexat_30min_R1	1	QSGLSSLVNGKSPIR	15	1	H0Y612;Q9UPN9-2;Q9UPN9	H0Y612	TRIM33	E3 ubiquitin-protein ligase TRIM33	1	QSGLSSLVNGKS(1)PIR	115.91	0.00075042	108870000.0	3278.7	2412.1	4776.5	3451.5	2591.2	2494.9	2534.7	2936.0	3422.4	4084.4	True	False	3134.5722738045315	2810.658526310299	3773.9779247346314	3148.912353799452	2931.9882183699133	2977.0041152368367	3103.17099745122	2832.7392158593593	3263.293371002142	3344.6755813547893	0.9371827543689144	0.8403381607407848	1.1283539562919132	0.9414701896211883	0.8766136347317388	0.8900726072903536	0.9277943172575961	0.8469399040226001	0.9756681303244117	1.0	11.707650567316971	-7.5248547857834875	24.99999997364655	0.9106434668484924	0.9689822359395219	0.06687179101835339	0.07817041164042475	151.0288938182583	1910723.74516085	0.022849179032091615	0.02970766286424725	2.986381002507365e-08	7.5248547857834875	0.05833876909102953	
QSHAASAAPQAS(ph)SPPDYTMAWAEYYR	ddPTM_K562_Methotrexat_30min_R1	2	QSHAASAAPQASSPPDYTMAWAEYYR	26	0	Q96I24	Q96I24	FUBP3	Far upstream element-binding protein 3	1	QSHAASAAPQAS(0.608)S(0.163)PPDY(0.197)T(0.028)MAWAEY(0.002)Y(0.002)R;QSHAASAAPQAS(0.871)S(0.128)PPDYTMAWAEYYR	97.395	8.8477e-06	66126000.0	3092.0	2404.2	2939.7	3070.3	3094.8999999999996	2596.4	2777.6	3796.7	3788.4	4558.9	True	False	2956.079382256264	2801.4531855873383	2322.6971433774515	2801.1315659482702	3501.933597187806	3098.11755372998	3400.54750563006	3663.1679090099537	3612.278110888416	3733.239033355779	0.7918269780863905	0.7504082006420933	0.6221667358089303	0.7503220503484223	0.9380416217388431	0.829873877897689	0.9108839469551283	0.9812304747379545	0.9675989344945233	1.0	11.866212169728621	-8.185917955805424	0.8440441154347206	0.979046490333691	0.7155495269473663	0.7286144992180285	0.06172309401992393	0.340955234153744	0.5301781304121467	0.041514681783062425	0.042269167669801135	6.5175150724598215e-09	8.185917955805424	-0.26349696338632467	
QSHSES(ph)PSLQSK	ddPTM_K562_Methotrexat_30min_R1	4	QSHSESPSLQSK	12	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	QSHS(0.009)ES(0.977)PS(0.014)LQSK;QS(0.025)HS(0.084)ES(0.788)PS(0.104)LQSK;QSHS(0.001)ES(0.975)PS(0.024)LQSK;QSHS(0.001)ES(0.917)PS(0.082)LQSK	233.28	2.1601999999999995e-45	298835000.0	13373.900000000001	10183.8	18649.0	14081.4	10022.800000000001	9239.4	9379.7	11647.7	12084.599999999999	15885.900000000001	True	False	12785.999369455703	11866.49985499724	14734.829753664013	12846.90552478389	11340.97387892789	11024.783286832837	11483.33649141643	11238.043789020787	11522.789583687612	13008.809572481652	0.9828723603197888	0.9121895273260967	1.1326808707257519	0.9875542764466129	0.8717918281253161	0.847485945997261	0.8827353823141396	0.8638794907716478	0.8857681803615981	1.0	13.667201327580944	-7.710070983040319	5.521928974359592	0.8823787737986535	1.0083180659143929	0.4194605153538201	0.06407271246415266	0.17627319315318074	11.617526988842812	0.019012743890842745	0.024297878724863206	1.9495259344436485e-08	7.710070983040319	0.1259392921157394	
QSHSGSIS(ph)PYPK	ddPTM_K562_Methotrexat_30min_R1	4	QSHSGSISPYPK	12	0	Q9UQ35;Q9UQ35-2;I3L4D8	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	QSHSGS(0.001)IS(0.999)PYPK;QSHSGSIS(1)PYPK;QSHSGSIS(1)PYPK;QSHSGSIS(1)PYPK	148.7	3.4826e-09	221552000.0	31162.9	23884.199999999997	46004.9	32067.699999999997	25902.699999999997	22818.199999999997	20665.5	29503.899999999998	31644.6	37699.6	True	False	29793.01622940288	27830.658088014767	36349.10018415667	29256.374529316137	29309.3590706894	27227.49420910544	25300.264428858718	28466.231114030266	30173.44945301964	30871.837123406884	0.9650548527549063	0.9014901826789469	1.177419407819982	0.9476719643332819	0.9493882386567523	0.8819525090219422	0.8195257161964027	0.9220776528536199	0.9773778389800544	1.0	14.914003717052752	-7.509396051030536	24.339370729288557	0.9168900634799179	1.0132062331996496	0.196684549100132	0.08007154422268815	692.0661465382402	1249338.853632214	0.023521593613687948	0.03321303084875781	3.0945959225195516e-08	7.509396051030536	0.09631616971973178	
QSIPIS(ph)S(ph)SSST(ph)VLQT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	QSIPISSSSSTVLQTR	16	0	A0A590UK59;H3BM45;Q8N957	A0A590UK59	ANKFN1	Ankyrin repeat and fibronectin type-III domain-containing protein 1	4	QS(0.035)IPIS(0.941)S(0.93)S(0.116)S(0.205)S(0.205)T(0.568)VLQT(1)R	86.411	0.010304	35754000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
QSIS(ph)FSGLPSGR	ddPTM_K562_Methotrexat_30min_R1	1	QSISFSGLPSGR	12	0	M0QY76;P26651	M0QY76	ZFP36	Tristetraprolin	1	QS(0.004)IS(0.894)FS(0.022)GLPS(0.08)GR	101.2	0.0069336	4942600.0	1222.2	1012.4	991.78	904.93	835.31	861.07	1001.2	740.56	1109.7	1360.3	True	False	1168.473551420958	1179.681892142343	783.6189314756233	825.5961918944631	945.167906254466	1027.4595909683696	1225.7445862027714	714.5140850465963	1058.1102892125643	1113.9364884234935	1.0489588621651567	1.0590207829639338	0.7034682314650142	0.7411519422107214	0.848493532689751	0.9223681975105144	1.1003720579595297	0.6414316188329708	0.9498838580196456	1.0	10.121451263795583	-6.7276644446062175	24.86322960277615	0.8562616247538437	1.0539903266535624	0.2466852789909082	0.13275722498582065	240.63335108667653	177137.5696305577	0.03401454479571569	0.08998280195466378	1.872128071806853e-07	6.7276644446062175	0.1977287018997187	
QSLTS(ph)PDSQSARPANR	ddPTM_K562_Methotrexat_30min_R1	1	QSLTSPDSQSARPANR	16	1	Q15751	Q15751	HERC1	Probable E3 ubiquitin-protein ligase HERC1	1	QSLT(0.028)S(0.6)PDS(0.089)QS(0.283)ARPANR	118.52	0.001273	6883700.0	2796.5	2435.7	3317.6	3080.1	2555.2	2573.2	2099.9	2403.5	2706.6	2850.8	True	False	2673.569208434552	2838.1580251788887	2621.2810976865085	2810.0724151637514	2891.2535873644665	3070.4344820744022	2570.8560293319997	2318.9675426832314	2580.770756765546	2334.492495183194	1.1452464353391505	1.2157494749008266	1.1228483720102127	1.203718761556026	1.2384934170189235	1.315247099063155	1.101248358963029	0.9933497526627326	1.1054954179936338	1.0	11.1888932353414	-8.990659450447346	23.8602565260933	1.039113344897842	1.2050507177454584	0.6628865877461358	0.056340404411805746	71.10901633942278	181645.7181677611	0.02422406943087386	0.016302916635247005	1.0217403615692077e-09	8.990659450447346	0.16593737284761634	
QSMIST(ph)QNQYS(ph)T(ph)LSK	ddPTM_K562_Methotrexat_30min_R1	1	QSMISTQNQYSTLSK	15	0	Q16513-4;Q16513-3;Q16513-2;Q16513;B1AL79;H0Y5V5	Q16513-4	PKN2	Serine/threonine-protein kinase N2	3	QS(0.165)MIS(0.299)T(0.536)QNQY(0.106)S(0.839)T(0.831)LS(0.225)K	58.246	0.033819999999999996	0.0	1247.6	881.07	1921.7	1209.6	1009.2	770.94	865.61	1071.1	1194.9	1990.7	True	False	1192.75699783406	1026.651841870659	1518.3614315843283	1103.5562460251535	1141.9274891860591	919.9132440581542	1059.7450771703761	1033.4288058947402	1139.3493598090406	1630.164939722599	0.731678720827494	0.6297840278943563	0.9314158307457551	0.67695987021592	0.7004981283552681	0.5643068511918147	0.650084572025399	0.6339412538651433	0.6989166139243068	1.0	10.670802228063948	-10.070068750143596	21.034023498903963	1.000000000342786	0.6888098515471921	0.5047421316294007	0.09190630785785743	5760.936416155584	1729380.230142021	0.092119481929799	0.023785147926176416	8.510033111141699e-11	10.070068750143596	-0.3111901487955939	
QSNAS(ph)SDVEVEEK	ddPTM_K562_Methotrexat_30min_R1	1	QSNASSDVEVEEK	13	0	O75475-3;O75475-2;O75475	O75475-3	PSIP1	PC4 and SFRS1-interacting protein	1	QS(0.013)NAS(0.663)S(0.324)DVEVEEK	122.16	0.0010934	12801000.0	1293.9	1032.4	2143.4	1272.5	1426.8	1193.0	995.91	1200.9	1523.0	1554.1	True	False	1237.0217052721139	1202.98655220047	1693.5296312940886	1160.9419006837034	1614.4492088492555	1423.530365737122	1219.2681690423503	1158.6636663233996	1452.1960624229384	1272.6374304630974	0.9720142403967929	0.9452704465581511	1.3307243608871646	0.9122330311008144	1.2685853568378678	1.1185671045516212	0.9580640486101948	0.9104428634491568	1.1410917419696682	1.0	10.313605744139261	-11.945297479024468	8.083502329013323	0.9999999997303669	1.0622019645611547	0.016752233712759024	0.14222236980398428	5.086007708039725e-10	4.220682786762353e-19	0.1359041179540359	0.03296159019299362	1.1342336326473156e-12	11.945297479024468	0.06220196483078777	
QSNASS(ph)DVEVEEK	ddPTM_K562_Methotrexat_30min_R1	1	QSNASSDVEVEEK	13	0	O75475-3;O75475-2;O75475	O75475-3	PSIP1	PC4 and SFRS1-interacting protein	1	QSNAS(0.193)S(0.807)DVEVEEK	136.83	2.0609000000000002e-05	9686100.0	2081.1	1469.1	2408.5	1757.1	1422.6	964.69	1402.0	1855.1	1951.8	2067.8	True	False	1989.6173358387796	1711.8438045696541	1902.9887640999395	1603.0577710737405	1609.6968352319532	1151.102689457623	1716.4341888296894	1789.8550815193112	1861.061244016475	1693.301382608323	1.1749930380225748	1.0109504558088585	1.123833467358669	0.9467055230324248	0.9506263041918815	0.6797978796216954	1.0136613638062075	1.0570209768341765	1.0990726536523219	1.0	10.725623059134787	-7.266837426935848	24.17246716055044	0.955906686760607	1.0940281356294184	0.24051749327496164	0.11255870140871259	439.58923152363883	1968483.7592469123	0.03392430500784427	0.052085738345015314	5.409567858995974e-08	7.266837426935848	0.1381214488688114	
QSNPKS(ph)SPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR	ddPTM_K562_Methotrexat_30min_R1	1	QSNPKSSPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR	41	2	P40222	P40222	TXLNA	Alpha-taxilin	1	QS(0.005)NPKS(0.498)S(0.498)PGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR	68.28699999999999	4.9325e-06	14210000.0	597.1	509.46	854.63	1035.1	549.94	480.76	451.9	478.0	572.24	858.77	True	False	570.8521989473529	593.6396056606463	675.254842209978	944.3543900964253	622.2667493093358	573.660065910963	553.2500784109387	461.1884690670206	545.636687301971	703.2384313485586	0.8117477280823	0.8441512568109495	0.9602075371721109	1.34286516208378	0.884858849531377	0.8157404947435668	0.7867176390658911	0.6558066915976518	0.7758914515744482	1.0	9.457870104398463	-7.997251725075199	24.998982053977855	0.791421774450784	0.9943123408319618	0.23248833861979934	0.15533236709210746	124.33141438837882	1130927.164212164	0.051369391163449206	0.057924867434686424	1.0063482018337152e-08	7.997251725075199	0.20289056638117786	
QSNPKSS(ph)PGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR	ddPTM_K562_Methotrexat_30min_R1	2	QSNPKSSPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR	41	2	P40222	P40222	TXLNA	Alpha-taxilin	1	QS(0.025)NPKS(0.104)S(0.843)PGQPEAGPEGAQERPS(0.027)QAAPAVEAEGPGSSQAPR;QS(0.044)NPKS(0.242)S(0.712)PGQPEAGPEGAQERPS(0.001)QAAPAVEAEGPGSSQAPR	53.748000000000005	0.00045054	68652000.0	1630.83	1191.03	2150.11	2147.8900000000003	1200.8	1174.46	1186.44	1327.13	1226.95	1993.93	True	False	1559.140665900706	1387.8274634514976	1698.8312939916625	1959.5878185143592	1358.7262475372765	1401.4077731296074	1452.5293716084848	1280.4540856755546	1169.909362304546	1632.8099554232588	0.9548818959133206	0.8499626419118343	1.040434184241172	1.2001322088989792	0.8321398598926757	0.8582797823316388	0.8895887526800133	0.7842027673965485	0.7165006303512406	1.0	10.673141168443728														
QSPAS(ph)PPPLGGGAPVR	ddPTM_K562_Methotrexat_30min_R1	2	QSPASPPPLGGGAPVR	16	0	A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160-2;Q14160;Q14160-3;H0YCG0	A0A0G2JMS7	SCRIB	Protein scribble homolog	1	QS(0.298)PAS(0.702)PPPLGGGAPVR;QS(0.065)PAS(0.935)PPPLGGGAPVR	90.259	0.0092599	179078000.0	4076.8	3747.2	3917.2	4399.700000000001	3070.7	3114.6	3311.3	3192.9	3539.4	3954.4	True	False	3897.588753422488	4366.361108490506	3095.0332517053266	4013.985131974923	3474.5508730119222	3716.4523697609725	4053.9433163136578	3080.6038972470515	3374.8540665395585	3238.219841080547	1.2036207992975299	1.3483831619762772	0.9557823136160387	1.239565356574282	1.0729817750275148	1.1476837744656787	1.2519049092605508	0.9513263609116478	1.0421942400962556	1.0	11.660985217452167	-3.0000000078273428	0.11562909976216613	0.9259478620894616	1.9102158862624254	0.2649055169628175	0.11168200458401786	136.96650575684498	1.0984588551077434	0.867533831290326	21.619250780157927	0.0009999999819768773	3.0000000078273428	0.9842680241729639	
QSPDHPT(ph)VGAGVLHITENGPTEVDYSPSDMQDSSLSHK	ddPTM_K562_Methotrexat_30min_R1	2	QSPDHPTVGAGVLHITENGPTEVDYSPSDMQDSSLSHK	38	0	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	QS(0.084)PDHPT(0.617)VGAGVLHIT(0.04)ENGPT(0.109)EVDY(0.102)S(0.038)PS(0.005)DMQDS(0.002)S(0.002)LS(0.001)HK;QS(0.158)PDHPT(0.743)VGAGVLHIT(0.065)ENGPT(0.021)EVDY(0.008)S(0.003)PS(0.001)DMQDSSLSHK	50.733000000000004	0.000734	38965000.0	1876.22	1502.99	2100.0099999999998	1347.62	1385.3	1062.47	1194.07	2598.4	2132.13	3011.2	True	False	1793.7436153223948	1751.3335510381476	1659.2465993346543	1229.476246915027	1567.4912314401975	1267.7772905990948	1461.8705933351412	2507.0127992128614	2033.0077416768345	2465.8425008754143	0.7274364095377489	0.7102373936763583	0.6728923679211445	0.49860291015283537	0.6356818129640123	0.5141355500803532	0.5928483237741881	1.0166962400570316	0.8244677999325113	1.0	11.26786493904093	-9.25595306374866	24.996716638286838	0.9404365220122751	0.618732850581204	0.7545222170427506	0.08500822693850742	222.03086445240794	1011621.0193920217	0.04309022084353393	0.023967928217141832	5.546856572116418e-10	9.25595306374866	-0.32170367143107115	
QSPGST(ph)S(ph)PKPPHTLSR	ddPTM_K562_Methotrexat_30min_R1	1	QSPGSTSPKPPHTLSR	16	1	E9PPY3;O43159	E9PPY3	RRP8	Ribosomal RNA-processing protein 8	2	QSPGS(0.484)T(0.58)S(0.936)PKPPHTLSR	91.65700000000001	0.029570999999999997	32133000.0	2233.6	2511.1	2593.2	2462.0	2509.5	2116.6	2111.2	2577.7	2577.7	2019.0	True	False	2135.413618437123	2926.0165935980235	2048.922758174782	2246.160282501595	2839.543236338106	2525.6029942323503	2584.690341980912	2487.0408299457317	2457.8632896307345	1653.3395354899903	1.291575972508432	1.7697614620525344	1.239263148429796	1.3585595906263221	1.7174592244275872	1.5275767257835835	1.5633149068892873	1.504252923588779	1.4866052839547639	1.0	10.691167316531228	-10.460537171976402	3.174961868623988	1.0000004295949774	1.5028264912818259	0.4623911737524571	0.16015736531303384	13.469210149085	91.54661582877168	0.15052910392155794	0.03996119308710882	3.463082422497654e-11	10.460537171976402	0.5028260616868485	
QSPPLS(ph)LEIYQTLSPR	ddPTM_K562_Methotrexat_30min_R1	1	QSPPLSLEIYQTLSPR	16	0	A0A1X7SBY3;H0Y860;Q9P246;Q9P246-2	A0A1X7SBY3	STIM2	Stromal interaction molecule 2	1	QS(0.001)PPLS(0.881)LEIYQT(0.1)LS(0.019)PR	98.421	0.0027978	15024000.0	1082.8	1192.0	1467.6	1240.2	1229.9	1205.6	1342.0	934.26	1067.0	1038.6	True	False	1035.2014085081119	1388.9577394643165	1159.5708159406558	1131.473591534719	1391.6534076000137	1438.5651374121335	1642.9776614903296	901.4015462563912	1017.3954028924986	850.4994757602301	1.217168779066893	1.6331082840736362	1.3633998009277528	1.3303636554547391	1.636277795887018	1.6914356544738058	1.9317797462740733	1.0598496200725598	1.1962328395124364	1.0	9.732166536400188	-9.299509034664881	24.878492528918088	1.0960306671536766	1.5409687646236163	0.527490416566569	0.19855735303638122	467.29762099265224	305376.0753175651	0.11337106274202813	0.05446372673944709	5.01754140894257e-10	9.299509034664881	0.44493809746993973	
QSPSPSEVS(ph)QSPGREVMSYAQAQR	ddPTM_K562_Methotrexat_30min_R1	1	QSPSPSEVSQSPGREVMSYAQAQR	24	1	A0A5F9ZH11;P55201-3;P55201;P55201-2;C9JHC0;A0A5F9ZHX4;A0A5F9ZHW9;P55201-4	A0A5F9ZH11	BRPF1	Peregrin	1	QS(0.001)PS(0.029)PS(0.071)EVS(0.457)QS(0.434)PGREVMS(0.006)Y(0.002)AQAQR	53.603	0.016037	28074000.0	160.06	156.12	147.89	162.66	0.0	174.1	164.56	155.15	215.64	292.5	True	False	153.02395405043256	181.9161764137324	116.8499100364293	148.3998503459421	0.0	207.74236100153652	201.4667689827487	149.69328656014284	205.61494346742117	239.52541561704916	0.6388631187893886	0.7594859023418966	0.48783929561465733	0.6195578450981681	0.0	0.8673082164010225	0.8411081073118845	0.62495784079745	0.8584264134882299	1.0	7.904034935670522														
QSPSPSEVSQS(ph)PGREVMSYAQAQR	ddPTM_K562_Methotrexat_30min_R1	1	QSPSPSEVSQSPGREVMSYAQAQR	24	1	A0A5F9ZH11;P55201-3;P55201;P55201-2;C9JHC0;A0A5F9ZHX4;A0A5F9ZHW9;P55201-4	A0A5F9ZH11	BRPF1	Peregrin	1	QSPS(0.002)PS(0.033)EVS(0.232)QS(0.729)PGREVMS(0.003)Y(0.001)AQAQR	58.324	0.007708700000000001	23153000.0	264.05	270.35	430.58	457.06	285.66	208.38	263.4	452.99	323.76	482.0	True	False	252.4426781645427	315.0207423357197	340.20714222385374	416.9902594314293	323.22929702822984	248.64648584434335	322.4741550197862	437.05808494282377	308.70846826661233	394.70512932450487	0.6395728340206043	0.7981166671810007	0.8619273400527666	1.0564601988959785	0.8189133431871073	0.6299550407917802	0.8170001630626536	1.1073027748354864	0.7821242880601361	1.0	8.624631457429716	-3.0000000000000004	0.10852207418053562	1.0381799367309283	0.1795281432822805	0.17766798280130736	0.13857334077973318	236.84693388298362	1.80227658036409	1.4497041292462844	30.42415543755761	0.000999999999999999	3.0000000000000004	-0.8586517934486478	
QSS(ph)GPGASSGTSGDHGELVVR	ddPTM_K562_Methotrexat_30min_R1	2	QSSGPGASSGTSGDHGELVVR	21	0	P29692-3;E9PL71;E9PN91	P29692-3	EEF1D	Elongation factor 1-delta	1	QS(0.242)S(0.758)GPGASSGTSGDHGELVVR;QS(0.227)S(0.773)GPGASSGTSGDHGELVVR	199.57	1.4960000000000002e-23	53089000.0	2038.44	1702.81	2324.7	1820.0300000000002	1995.28	2027.4	1589.95	1760.95	1730.1100000000001	1996.27	True	False	1948.8326183591378	1984.1704096788862	1836.7772389051813	1660.4707956788704	2257.694293126398	2419.1663566600537	1946.5367607202322	1699.0163903840385	1649.6775637285293	1634.7261587481937	1.1921462245710155	1.2137631731532836	1.1235993435816247	1.0157485929939427	1.3810840923076975	1.4798603079261619	1.1907417950727663	1.0393278294910724	1.0091461220586235	1.0	10.6748332674777	-9.247295062655237	4.158084194534877	1.0136099710132993	1.232671271306961	0.3978799718404199	0.1204378959085677	0.2500543709904323	10.528710262831968	0.07331180002573429	0.03718046906755895	5.658547128310492e-10	9.247295062655237	0.21906130029366166	
QSSVTQVTEQS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	QSSVTQVTEQSPK	13	0	Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;C9JWN0	Q14966-3	ZNF638	Zinc finger protein 638	1	QSSVTQVT(0.001)EQS(0.999)PK	167.92	0.00012756	11097000.0	1832.0	1408.3	2171.9	2124.6	1343.3	1431.1	1371.1	1660.5	1746.5	2149.5	True	False	1751.4674735748615	1640.9976379929499	1716.047870769632	1938.3396166543012	1519.967495267176	1707.639820960936	1678.60407724992	1602.09927381964	1665.305596205949	1760.204720919137	0.9950362322970518	0.9322765803832522	0.9749137985913098	1.1012012373436577	0.863517451807245	0.9701370531884764	0.953641390288621	0.9101778076035736	0.9460863139466904	1.0	10.781527516183058	-7.784428934246256	24.999989497772052	0.9382318607595823	0.9941054212386279	0.2383464625255275	0.05211833158935827	373.673297316528	406348.7254862577	0.016136345009127882	0.01830800304145183	1.642748448734775e-08	7.784428934246256	0.05587356047904557	
QSSVTQVTEQS(ph)PKVQSR	ddPTM_K562_Methotrexat_30min_R1	1	QSSVTQVTEQSPKVQSR	17	1	Q14966-3;Q14966;Q14966-2;Q14966-6;Q14966-4;C9JWN0	Q14966-3	ZNF638	Zinc finger protein 638	1	QSS(0.001)VT(0.044)QVT(0.051)EQS(0.899)PKVQS(0.005)R	76.156	0.015955	8372100.0	1430.2	1117.0	1643.1	1899.3	856.35	909.98	1109.4	1112.3	1166.6	1770.4	True	False	1367.330120473126	1301.5652642463428	1298.2357642900597	1732.7913178534848	968.9750350420948	1085.8207562560494	1358.2111905047486	1073.179778542359	1112.3650206320415	1449.763404473244	0.9431401815318485	0.8977777065073957	0.8954811249093156	1.1952235188907088	0.6683677019659366	0.7489641088371731	0.9368502379864114	0.7402447704439659	0.7672734855907108	1.0	10.501601762113404	-7.782613769090608	24.99999653118032	0.8005580487569888	0.9705806465223765	0.32605533675875165	0.12057869798119498	288.07022610511723	340114.5069734267	0.0370230530113031	0.04202100842882279	1.6496288029826723e-08	7.782613769090608	0.17002259776538775	
QSSYSQQPYNNQGQQQNMESS(ph)GSQGGR	ddPTM_K562_Methotrexat_30min_R1	1	QSSYSQQPYNNQGQQQNMESSGSQGGR	27	0	A0A075B7F2;Q92804-2;Q92804	A0A075B7F2	TAF15	TATA-binding protein-associated factor 2N	1	QSSYSQQPYNNQGQQQNMES(0.138)S(0.811)GS(0.051)QGGR	89.889	0.00047028	10419000.0	1792.0	1445.4	1621.6	1265.0	1363.8	1422.6	1341.4	1604.5	1919.3	1883.7	True	False	1713.2258256802138	1684.2277824007738	1281.2483204751761	1154.0994140392022	1543.1636045897214	1697.4973162595388	1642.2430962169374	1548.0688255607417	1830.0721619227488	1542.5436765737968	1.1106497998718103	1.0918509524097735	0.8306074829083648	0.748179407537177	1.000401886847899	1.100453323973241	1.0646331258928026	1.0035818428164167	1.1863989264716268	1.0	10.591095624010414	-8.00165676725501	24.989895962240507	1.0685706715198007	0.9384314285798881	0.21934991011094862	0.11174056684152357	106.67401564793832	1609060.2292372044	0.03812929628162823	0.04262644831022372	9.961924197029627e-09	8.00165676725501	-0.13013924293991253	
QSSYSQQPYNNQGQQQNMESSGS(ph)QGGR	ddPTM_K562_Methotrexat_30min_R1	1	QSSYSQQPYNNQGQQQNMESSGSQGGR	27	0	A0A075B7F2;Q92804-2;Q92804	A0A075B7F2	TAF15	TATA-binding protein-associated factor 2N	1	QSSYSQQPYNNQGQQQNMES(0.025)S(0.175)GS(0.8)QGGR	133.88	1.2017999999999999e-16	9134300.0	2393.1	2346.4	2346.8	2909.4	2294.1	2236.1	2194.0	2781.1	2776.1	3087.5	True	False	2287.9021894170323	2734.102718019356	1854.2387509195514	2654.337419134906	2595.814360822174	2668.194677975508	2686.060349709229	2683.287136657513	2647.0397169352073	2528.3238315132985	0.9049086833341421	1.0813894501729595	0.7333865732736137	1.0498407625047712	1.0266937836315373	1.055321571041986	1.0623877828583055	1.0612909245298152	1.0469543829560997	1.0	11.303965542559158	-7.412649652447302	19.846355632725523	1.046445915830813	0.9186270524365664	0.3764026450811073	0.08007031427360053	5.773936216456886	1029.4608595842253	0.02148327730591064	0.03186482794120291	3.866787869988851e-08	7.412649652447302	-0.12781886339424664	
QSTLYSFFPKS(ph)PALSDANK	ddPTM_K562_Methotrexat_30min_R1	1	QSTLYSFFPKSPALSDANK	19	1	F8WAX8;P52701-2;P52701;F8W7G9;A0A087WWJ1;P52701-3	F8WAX8	MSH6	DNA mismatch repair protein Msh6	1	QSTLY(0.001)S(0.004)FFPKS(0.755)PALS(0.239)DANK	88.781	0.0023182	10684000.0	2361.6	1223.3	3844.6	3068.0	1318.6	1495.6	1212.1	2163.5	2449.4	3600.8	True	False	2257.7868916999973	1425.429532455284	3037.670999567625	2799.033203377291	1492.0190123273262	1784.6035331068233	1483.944279800617	2087.408478716526	2335.527928626884	2948.6602275346013	0.7656992387989549	0.4834159999665669	1.0301868527278393	0.9492559289266046	0.5059989612892142	0.6052252193868213	0.503260520131665	0.7079176024501899	0.7920641065449707	1.0	11.525843875697944	-10.099459247319183	2.651069838202005	0.9993214902992504	0.6913728834532871	0.22046204697022886	0.17535888067076993	0.6833901184278147	10.429648694874741	0.1796935699012784	0.048486343997151356	7.953178918915717e-11	10.099459247319183	-0.30794860684596337	
QT(ph)PS(ph)RER	ddPTM_K562_Methotrexat_30min_R1	1	QTPSRER	7	1	A0A087WVQ4;Q5VU43-8;Q5VU43-9;A0A087WX83;A0A075B749	A0A087WVQ4	PDE4DIP		2	QT(1)PS(1)RER	41.302	0.032945999999999996	7357000.0	0.0	0.0	185.97	135.08	0.0	0.0	111.35	0.0	66.709	0.0	True	False	0.0	0.0	146.93743843041963	123.23774612522968	0.0	0.0	136.3230719872938	0.0	63.60771315047392	0.0											0.0														
QT(ph)SPDPCPQLPLVPR	ddPTM_K562_Methotrexat_30min_R1	1	QTSPDPCPQLPLVPR	15	0	A0A1W2PQC8;Q5D1E8	A0A1W2PQC8	ZC3H12A	Ribonuclease ZC3H12A	1	QT(0.541)S(0.459)PDPCPQLPLVPR	153.94	1.7688e-08	16492000.0	1743.4	1470.5	1700.4	1318.0	1260.9	1084.1	1226.5	1312.3	1628.2	1576.0	True	False	1666.7622234882178	1713.4751307737229	1343.5092773408912	1202.4529863270106	1426.730450965816	1293.5869819745308	1501.573846362063	1266.1456651812787	1552.5053373847854	1290.5711282477585	1.2914919503516429	1.327687481355756	1.0410191642556024	0.9317215920982301	1.1055031526258647	1.0023368365065373	1.1634956132954783	0.9810739117497206	1.2029599170505711	1.0	10.33379394065613	-6.762341061743698	24.999096493497866	1.0524450400188954	1.3095897897745503	0.6228824398066772	0.07969758444140448	13.149411180460175	364616.4589037193	0.019615315861094544	0.045028410202598734	1.7284584267324055e-07	6.762341061743698	0.25714474975565493	
QTAVS(ph)PVQACSEHTSTR	ddPTM_K562_Methotrexat_30min_R1	3	QTAVSPVQACSEHTSTR	17	0	A0A3B3IU55	A0A3B3IU55			1	QT(0.229)AVS(0.771)PVQACSEHTSTR;QT(0.047)AVS(0.953)PVQACSEHTSTR;QTAVS(0.578)PVQACS(0.366)EHT(0.038)S(0.012)T(0.006)R	122.97	0.00019749	69812000.0	4418.62	3987.3399999999997	5211.879999999999	4198.8099999999995	3667.6	3957.6800000000003	3579.6	4277.91	4443.18	4533.85	True	False	4224.3827555062	4646.18016180843	4117.977612554368	3830.706846373077	4149.953685432806	4722.4456478378	4382.416421066157	4127.453480557528	4236.617531606273	3712.725831095241	1.1378116639062523	1.251420216083616	1.1091520892991926	1.0317774650338325	1.1177646490014546	1.271961858396825	1.180377065379309	1.1117043564027305	1.1411070260355005	1.0	11.858263066937033	-10.523986204983165	1.305332577217699	1.0001135335985334	1.1541594266789645	0.3179289731212679	0.06648342190161749	3.3704237340983525	7.056178227413429	0.06945284300335779	0.02065243176544448	2.992359685010482e-11	10.523986204983165	0.15404589308043115	
QTEQLSLELEVAR	ddPTM_K562_Methotrexat_30min_R1	1	QTEQLSLELEVAR	13	0	P49454	P49454	CENPF	Centromere protein F	0		86.49799999999999	0.034124	26602000.0	2285.0	2298.4	2343.3	2446.6	2534.8	2208.2	2618.4	2484.4	2487.1	2844.4	False	True	2184.554135981746	2678.1715338798513	1851.4733530892215	2232.1103765915527	2868.170629794712	2634.9033978379825	3205.6428530896274	2397.0222438286746	2371.4752638556083	2329.2515972004608	0.937878131588435	1.1497991617130408	0.7948790741689377	0.9582950932713055	1.2313700388751394	1.1312231795847585	1.3762544402427397	1.0290954599793631	1.0181275679732908	1.0	11.185650767246042	-7.744217549526555	24.696903320799954	1.1447392491637638	0.9619450997984057	0.28190618118250843	0.13245115417723294	272.8921314609061	391337.98410730826	0.039756561515232595	0.05119219929148828	1.8021147880348044e-08	7.744217549526555	-0.1827941493653581	
QTNGCLNGYT(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	3	QTNGCLNGYTPSR	13	0	A0A2R8Y653;Q9BZX2-2;Q9BZX2	A0A2R8Y653	UCK2	Uridine-cytidine kinase 2	1	QTNGCLNGYT(0.922)PS(0.078)R;QTNGCLNGYT(0.645)PS(0.355)R;QTNGCLNGYT(0.9)PS(0.1)R	174.24	2.1398000000000004e-09	46042000.0	2959.78	2645.87	2638.02	2929.3	2504.2	2627.32	2274.7799999999997	2862.16	3053.01	3314.26	True	False	2829.6716151405035	3083.055045399706	2084.3356526763237	2672.492817031648	2833.54619344008	3135.0124061261163	2784.9573210171175	2761.496210512268	2911.0762314759377	2714.015398163971	1.0426144291792794	1.135975517119538	0.7679896193980237	0.9847006832900016	1.044042047571643	1.1551196092133262	1.026139101090266	1.0174946731622885	1.0726085907417025	1.0	11.406213190677432	-7.783552589899872	5.355330091062678	1.057906863738417	0.9780445386007959	0.11494661119061333	0.09433376801842563	0.3915794685329794	31.20651244301701	0.030438371147343102	0.03612498439769027	1.6460666275749135e-08	7.783552589899872	-0.07986232513762115	
QTNGCLNGYTPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	QTNGCLNGYTPSR	13	0	A0A2R8Y653;Q9BZX2-2;Q9BZX2	A0A2R8Y653	UCK2	Uridine-cytidine kinase 2	1	QTNGCLNGYT(0.009)PS(0.991)R	162.81	4.4363e-05	15667000.0	971.9	605.06	880.06	812.44	694.28	725.08	664.97	874.21	863.52	852.97	True	False	929.1764397202012	705.0358807384891	695.3474327314898	741.2146465944742	785.589989290623	865.1914481045033	814.1064497475593	843.4635387930552	823.3751436792222	698.4888675517078	1.3302666411521813	1.0093731102826726	0.9955025270034308	1.0611688761662381	1.1246993700045866	1.2386617572547851	1.1655253040769364	1.2075547341928328	1.178794941378603	1.0	9.448093312058095	-8.006039090709253	15.84359906162022	1.172670090832265	1.0862279903281042	0.052378086271557156	0.1047835699097367	4.95250828355269	12997.714557157247	0.032673592284644754	0.03543169147326877	9.8619071492115e-09	8.006039090709253	-0.08644210050416068	
QTQAADYNWVVSLMVSVVT(ph)PFLNPFIFT(ph)LR	ddPTM_K562_Methotrexat_30min_R1	1	QTQAADYNWVVSLMVSVVTPFLNPFIFTLR	30	0	Q8NGU2	Q8NGU2	OR9A4	Olfactory receptor 9A4	2	QT(0.001)QAADY(0.007)NWVVS(0.008)LMVS(0.016)VVT(0.975)PFLNPFIFT(0.994)LR	42.708	0.032211000000000004	10020000.0	1257.4	768.59	1479.7	1625.5	879.77	860.63	953.12	1774.1	1794.6	2594.6	True	False	1202.1262015682482	895.5864337037568	1169.1311912969404	1482.9949387515594	995.4751755461939	1026.9345671955912	1166.8814222948308	1711.7038974305474	1711.1694377046656	2124.692797811952	0.565788241390106	0.421513375781218	0.5502589327270904	0.6979808752958429	0.4685266390375835	0.48333319915855477	0.5492000648265514	0.805624182090367	0.8053726352660768	1.0	11.053038546565586	-9.565328971232757	1.3783856776721612	0.9670865878148729	0.5267369877736413	0.7975988219400318	0.07933340368996665	0.18638313256907385	0.6405370020454928	0.07534975561077953	0.024787733095714533	2.720639685623551e-10	9.565328971232757	-0.4403496000412316	
QTQS(ph)ASSTLQK	ddPTM_K562_Methotrexat_30min_R1	1	QTQSASSTLQK	11	0	C9J840;A0A0D9SG62;G5E948;A0A0D9SEY1;O95819-2;O95819-3;E7EX83;H7C0P6;E7ENQ1;G3XAA2;H7C360;O95819-4;O95819;O95819-5	C9J840	MAP4K4	Mitogen-activated protein kinase kinase kinase kinase 4	1	QTQS(0.98)AS(0.015)S(0.004)T(0.001)LQK	99.844	0.0075368	16137000.0	1502.8	1478.5	2007.0	1927.4	1610.8	1503.6	1241.5	1716.0	2136.0	2348.5	True	False	1436.7387114019123	1722.7969947969732	1585.7581272777988	1758.4278344815489	1822.6484339882127	1794.1494198846083	1519.9379781969033	1655.6473073619404	2036.697826221535	1923.1638925697087	0.7470703443179557	0.8958139248834338	0.8245569363092231	0.9143411236428521	0.94773432520762	0.9329155080419522	0.7903320065800425	0.8608976664748443	1.0590349756931656	1.0	10.909265999457542	-3.000000000000073	0.11027942371603243	1.0427276137242205	0.33840552683550906	0.3833021206418601	0.07086791799343586	139.49188362218797	1.0757608579331148	0.6826609868980898	14.955746459947683	0.0009999999999998324	3.000000000000073	-0.7043220868887115	
QTS(ph)PTPASPSPPAAPCPFVAR	ddPTM_K562_Methotrexat_30min_R1	1	QTSPTPASPSPPAAPCPFVAR	21	0	Q92545	Q92545	TMEM131	Transmembrane protein 131	1	QT(0.004)S(0.672)PT(0.323)PAS(0.001)PSPPAAPCPFVAR	170.22	1.4213e-57	0.0	390.23	371.6	388.16	303.71	351.67	384.94	385.87	136.58	334.46	329.47	True	False	373.07595644820856	433.0005838799834	306.69052052025444	277.08421584019453	397.9207690468308	459.3242070300486	472.41117007397446	131.77640398571904	318.9110276020853	269.7997903704246	1.3827881627928242	1.6048959240683267	1.1367337242893343	1.0269993740905754	1.474874270660111	1.7024631724117145	1.7509693740879944	0.48842292947965293	1.1820284484440589	1.0	8.075745417113291	-9.257200787812701	24.99948298652798	0.8764192698843536	1.4301976293312884	0.46818498892428606	0.2682697608501554	331.79827672198604	1956980.9839442936	0.1384093663092357	0.07628344074781425	5.530943374230749e-10	9.257200787812701	0.5537783594469348	
QTSPTPAS(ph)PSPPAAPCPFVAR	ddPTM_K562_Methotrexat_30min_R1	1	QTSPTPASPSPPAAPCPFVAR	21	0	Q92545	Q92545	TMEM131	Transmembrane protein 131	1	QT(0.009)S(0.042)PT(0.117)PAS(0.721)PS(0.11)PPAAPCPFVAR	82.705	0.0021826000000000003	11236000.0	431.8	312.48	781.03	538.45	461.86	241.31	389.44	466.27	446.74	582.11	True	False	412.8185890227212	364.1120087481624	617.1024764064668	491.2449244975561	522.6026854493392	287.9397422933989	476.78183345066634	449.8710198156481	425.97115490927365	476.6842382387709	0.8660210594501356	0.763843189138087	1.2945728574674638	1.030545768227167	1.0963288557226594	0.6040471221730853	1.000204737652447	0.9437505663661317	0.8936128378885163	1.0	8.896890112663536														
QVAEQGGDLS(ph)PAANR	ddPTM_K562_Methotrexat_30min_R1	4	QVAEQGGDLSPAANR	15	0	O94804	O94804	STK10	Serine/threonine-protein kinase 10	1	QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR	247.02	4.957499999999999e-62	173107000.0	7839.1	7116.7	9335.1	8659.2	7314.5	6956.0	7474.1	7881.1	8010.0	8814.2	True	False	7494.502550273304	8292.613711783304	7375.790081689574	7900.061380275305	8276.484958037487	8300.148553283674	9150.357183118393	7603.91724595	7637.616848330752	7217.862968655708	1.038327075869815	1.1489015166670258	1.0218800375844874	1.0945152899940207	1.1466669558536855	1.1499454325093037	1.2677377255365936	1.0534859526941383	1.0581548695919925	1.0	12.817356038548734	-6.239053461667606	22.23178466966686	1.1111904560195172	1.0383267180258462	0.06031302129723204	0.07446476835937914	3531.1905586389003	3506624.106098716	0.018952808916922352	0.7490413478321445	5.766954677880556e-07	6.239053461667606	-0.07286373799367096	
QVAGDAPVEQATAET(ph)ASPVHR	ddPTM_K562_Methotrexat_30min_R1	1	QVAGDAPVEQATAETASPVHR	21	0	A0A087X055;Q92766-4;Q92766;Q92766-2	A0A087X055	RREB1	Ras-responsive element-binding protein 1	1	QVAGDAPVEQATAET(0.528)AS(0.472)PVHR	167.11	1.6702e-17	102660000.0	2443.4	2106.2	2672.3	2032.1	2097.9	2222.7	1979.9	2567.0	2370.1	2572.5	True	False	2335.9910616445513	2454.2137507212606	2111.42074914024	1853.9489480387847	2373.8106218424814	2652.205317622717	2423.942974653281	2476.717155010548	2259.9145683181923	2106.59532196533	1.1088940705826729	1.1650143362283851	1.0022906284489457	0.8800688621624578	1.1268470014581895	1.2590008579096077	1.1506448103150082	1.175696693705707	1.072780588067491	1.0	11.040697482981086	-7.976500499021645	24.99685118458745	1.149253300779412	1.0401890196696284	0.17460994749387337	0.09393978698121222	362.88038009143776	386000.9917936218	0.03040358246993147	0.034472759188809904	1.0556002902884852e-08	7.976500499021645	-0.1090642811097835	
QVAGDAPVEQATAETAS(ph)PVHR	ddPTM_K562_Methotrexat_30min_R1	4	QVAGDAPVEQATAETASPVHR	21	0	A0A087X055;Q92766-4;Q92766;Q92766-2	A0A087X055	RREB1	Ras-responsive element-binding protein 1	1	QVAGDAPVEQATAET(0.052)AS(0.948)PVHR;QVAGDAPVEQATAET(0.005)AS(0.995)PVHR;QVAGDAPVEQATAET(0.32)AS(0.679)PVHR;QVAGDAPVEQATAET(0.045)AS(0.955)PVHR	217.41	1.7705e-41	176986300.0	4606.84	4149.9800000000005	5021.3099999999995	4132.639999999999	4334.46	4280.26	4035.2	5436.8	5214.549999999999	4909.84	True	False	4404.328829674465	4835.693657401111	3967.405651261229	3770.337867537523	4904.517464107618	5107.3596674350165	4940.196318663026	5245.584662392424	4972.126708672047	4020.620398677651	1.0954351301413614	1.202723256090411	0.9867645432446387	0.9377502707735245	1.2198409642752333	1.2702914378872439	1.2287149317274062	1.304670459344447	1.2366565891938814	1.0	11.973202417170116	-7.8662560894960025	9.45286674187395	1.2301000055261433	1.0614574317564398	0.34871618603500887	0.10108716047744751	0.30435063728127343	25.16068462763622	0.031447455511714587	0.035691694008795245	1.3606421189452317e-08	7.8662560894960025	-0.16864257376970349	
QVAGDAPVEQATAETAS(ph)PVHREEHGR	ddPTM_K562_Methotrexat_30min_R1	1	QVAGDAPVEQATAETASPVHREEHGR	26	1	A0A087X055;Q92766-4;Q92766;Q92766-2	A0A087X055	RREB1	Ras-responsive element-binding protein 1	1	QVAGDAPVEQAT(0.055)AET(0.126)AS(0.82)PVHREEHGR	72.946	0.00034053	25878000.0	1484.3	1792.2	2097.6	1423.8	1549.9	1602.3	1783.9	2057.8	1617.7	1933.4	True	False	1419.0519492506364	2088.33058780868	1657.3424254000547	1298.977664592108	1753.7390165373306	1911.9217980055255	2183.984985344709	1985.4260076278565	1542.4934800929652	1583.2425249709497	0.8962947412473488	1.3190212837714157	1.046802621367478	0.8204540012692891	1.1076881708754691	1.207598815627193	1.3794380525401704	1.2540251896431889	0.974262285003536	1.0	10.628666552628047	-8.001591011093396	24.977835214827138	1.1885957539105374	1.0338552646363024	0.13295192879206297	0.16386591895979621	118.06523861320179	1853600.843590827	0.052692825032257216	0.05892014187763018	9.963432637772425e-09	8.001591011093396	-0.154740489274235	
QVDEFLASIAS(ph)PSSDVPR	ddPTM_K562_Methotrexat_30min_R1	1	QVDEFLASIASPSSDVPR	18	0	A0A087WZV0;O43314-2;O43314;K7ENU7;A0A087WWN8;H0Y9S9	A0A087WZV0	PPIP5K2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2	1	QVDEFLAS(0.009)IAS(0.956)PS(0.014)S(0.021)DVPR	147.53	1.5688e-22	0.0	664.31	354.22	560.94	560.2	501.45	435.22	412.89	515.44	411.01	798.77	True	False	635.1077278223341	412.7488342894713	443.2063596986592	511.08813576660964	567.3994643800529	519.3201054284249	505.4910928857993	497.3116830458268	391.9022348105398	654.1050127604459	0.9709568271645869	0.6310131037638647	0.6775767668072825	0.7813548677906041	0.8674439934124961	0.7939399565779149	0.7727980722124907	0.7602933372228385	0.5991426868243049	1.0	9.353378460401355	-6.235835312234244	23.922649003172506	0.7595029847531963	0.9709573136968651	0.23999953459260948	0.10966670267700918	6579.449241574992	6147212.127945975	0.026592432894015264	1.7879126836106831	5.80984689560786e-07	6.235835312234244	0.21145432894366878	
QVDLESNPQNRS(ph)PESRPSVVYPSTK	ddPTM_K562_Methotrexat_30min_R1	2	QVDLESNPQNRSPESRPSVVYPSTK	25	2	J3QS41;P42694	J3QS41	HELZ	Probable helicase with zinc finger domain	1	QVDLES(0.003)NPQNRS(0.846)PES(0.078)RPS(0.029)VVY(0.029)PS(0.011)T(0.003)K;QVDLES(0.01)NPQNRS(0.976)PES(0.007)RPS(0.002)VVY(0.001)PS(0.002)T(0.001)K	69.98100000000001	0.00097078	47725000.0	3429.0	3108.9	5438.9	4063.8999999999996	2888.8	2562.08	2365.47	3533.5	3857.8	4477.3	True	False	3278.265265768667	3622.592882735413	4297.34921696623	3707.624196611789	3268.7278346816183	3057.1656994532837	2895.9868620905586	3409.224802193135	3678.451720036253	3666.4175840759467	0.8941330851147152	0.9880469967384855	1.1720839534565177	1.011238930533939	0.8915317908353969	0.8338291068456639	0.789868255778737	0.9298517487479178	1.0032822600493116	1.0	11.840155394644253	-7.736470368050888	6.0270093129902325	0.8946964014483543	1.0265693094026154	0.2529482407563365	0.08895472316020457	0.21964056377805552	24.728541325102803	0.028417998732875226	0.035712461548273115	1.834550334371563e-08	7.736470368050888	0.1318729079542611	
QVETEEAGVVTTATASVNLKVS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	QVETEEAGVVTTATASVNLKVSPK	24	1	O75475-3;O75475-2;O75475	O75475-3	PSIP1	PC4 and SFRS1-interacting protein	1	QVETEEAGVVTTAT(0.002)AS(0.003)VNLKVS(0.994)PK	70.461	0.0049347	0.0	579.35	541.16	1240.8	634.6	450.97	375.17	470.56	544.15	639.24	749.16	True	False	553.8824676941031	630.5774918527761	980.373036535273	578.9656032800616	510.2804595701911	447.6662928026791	576.0950584134797	525.0119360728436	609.5218719259609	613.4798644911745	0.9028535405208418	1.0278699079647586	1.5980525087785935	0.9437401890284708	0.8317802899585338	0.7297163586191658	0.9390610707187561	0.8557932647199319	0.9935482926265292	1.0	9.260872182602677	-7.5001036781553765	24.81659485050605	0.8795358153253185	1.1796658894780925	0.32956234657434025	0.18195008905457083	778.0603755999837	847805.0205058742	0.05222297287462023	0.07679306976889774	3.1615228267619466e-08	7.5001036781553765	0.30013007415277393	
QVHPDTGISSK	ddPTM_K562_Methotrexat_30min_R1	4	QVHPDTGISSK	11	0	Q5QNW6;O60814;P57053;P58876;P62807;Q16778;U3KQK0;P23527;Q93079;Q99877;Q99879;P06899;P33778;Q5QNW6-2;Q8N257;Q99880;Q96A08	Q5QNW6	HIST2H2BF;HIST1H2BK;H2BFS;HIST1H2BD;HIST1H2BC;HIST2H2BE;HIST1H2BN;HIST1H2BO;HIST1H2BH;HIST1H2BM;HIST1H2BJ;HIST1H2BB;HIST3H2BB;HIST1H2BL;HIST1H2BA	Histone H2B type 2-F;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 1-D;Histone H2B type 1-C/E/F/G/I;Histone H2B type 2-E;Histone H2B;Histone H2B type 1-O;Histone H2B type 1-H;Histone H2B type 1-N;Histone H2B type 1-M;Histone H2B type 1-J;Histone H2B type 1-B;Histone H2B type 3-B;Histone H2B type 1-L;Histone H2B type 1-A	0	;;;	140.45	6.306600000000001e-05	111381000.0	55238.0	42561.700000000004	71657.0	59439.0	42118.0	39185.1	38580.9	50143.4	49430.6	60969.0	False	True	52809.803660113655	49594.29749979729	56617.17495084469	54228.075155000886	47657.25524131831	46757.06599702073	47233.64892711797	48379.8282004503	47132.58219514333	49926.92329831066	1.0577419991329715	0.9933377469201147	1.1340008798972077	1.0861489467514567	0.954540197812086	0.9365100612679413	0.9460556711035341	0.9690128092088399	0.9440313778906163	1.0	15.607530384173925	-7.767186130977855	24.99230252008559	0.9551014267885749	1.0672162442315551	0.6860590624078229	0.0362300510006094	80.67795486352468	350863.2514165947	0.011498155588242633	0.013392847560022679	1.7092825896247798e-08	7.767186130977855	0.11211481744298024	
QVIEEQTTSHES(ph)Q	ddPTM_K562_Methotrexat_30min_R1	2	QVIEEQTTSHESQ	13	0	R4GN33;Q8IW41-2;Q8IW41	R4GN33	MAPKAPK5	MAP kinase-activated protein kinase 5	1	QVIEEQTTSHES(1)Q;QVIEEQTTSHES(1)Q	168.93	4.2151e-14	9826900.0	3118.5	3450.1	3755.6	3726.5	2924.3	2984.4	2984.5	3372.6000000000004	3611.2	3696.9	True	False	2981.414473986467	4020.1703833270453	2967.3508833106644	3399.803530764496	3308.896706923099	3561.0930624525313	3653.850097405283	3253.9837463921217	3443.316100211239	3027.355586306562	0.9848246725532019	1.3279478636441708	0.9801791691510198	1.1230274851565514	1.092999025912256	1.1763048511909828	1.2069444745547904	1.0748601059983345	1.137400613190655	1.0	11.563842425460763	-11.202475969544096	1.2908869917292696	0.9993988536108479	1.1267456047391522	0.12345793088077828	0.09745897844343798	68.6038363380541	69.46369517178914	0.31024774469650157	0.02603712185235473	6.273704087894864e-12	11.202475969544096	0.1273467511283043	
QVLLSAAEAAEVILR	ddPTM_K562_Methotrexat_30min_R1	3	QVLLSAAEAAEVILR	15	0	P78371-2;P78371	P78371-2	CCT2	T-complex protein 1 subunit beta	0	;;	201.76	5.1022e-12	33926800.0	2664.25	2312.6000000000004	2399.89	2643.88	1883.52	2310.16	2022.33	2837.03	2753.6800000000003	3662.5999999999995	False	True	2547.132760082875	2694.7178425211214	1896.1858854373274	2412.0951452885106	2131.235894205039	2756.565724820847	2475.888982236764	2737.250046856087	2625.6620178416274	2999.2676486803566	0.8492515701970059	0.8984586099565893	0.6322162966254871	0.8042280409185238	0.7105854307943336	0.9190796046607259	0.8254978455577737	0.9126394731928795	0.8754343811219678	1.0	11.550394555849854	-9.556047766046502	0.6396383906999831	0.9891973261249738	0.7844442099220551	0.3921502918269266	0.07921222467689723	0.7503033317794764	0.6760835539959388	0.07856413664090794	0.03752801723803144	2.7794075567330023e-10	9.556047766046502	-0.2047531162029187	
QVLTAPGS(ph)AGQPRS(ph)EDEDSLEEAGSPAPGPCPR	ddPTM_K562_Methotrexat_30min_R1	1	QVLTAPGSAGQPRSEDEDSLEEAGSPAPGPCPR	33	1	Q8TBB5-2;Q8TBB5-3;Q8TBB5	Q8TBB5-2	KLHDC4	Kelch domain-containing protein 4	2	QVLT(0.014)APGS(0.986)AGQPRS(0.994)EDEDS(0.006)LEEAGSPAPGPCPR	98.15100000000001	1.872e-09	48525000.0	1036.2	1097.7	1347.7	1047.4	1274.0	985.91	1118.0	1172.1	1030.6	1162.7	True	False	990.6498887108474	1279.0762672902522	1064.8361874102097	955.5760681934082	1441.5533305816875	1176.4231541356964	1368.7399594233902	1130.876578647396	982.6876309475244	952.1237632066437	1.04046335885416	1.3433928620607787	1.1183800137746416	1.0036258994052807	1.5140398615057156	1.235577977986431	1.4375651699035752	1.1877411554551829	1.0321007298861495	1.0	9.895005306332374	-9.722503549837143	3.8668854864379005	1.0066828201164137	1.2460390550287386	0.25045400621498526	0.1536927715346436	0.3010591744401481	8.967635489113514	0.13102819824368078	0.039941608755608975	1.8945080289596237e-10	9.722503549837143	0.23935623491232483	
QVLTAPGS(ph)AGQPRSEDEDS(ph)LEEAGSPAPGPCPR	ddPTM_K562_Methotrexat_30min_R1	1	QVLTAPGSAGQPRSEDEDSLEEAGSPAPGPCPR	33	1	Q8TBB5-2;Q8TBB5-3;Q8TBB5	Q8TBB5-2	KLHDC4	Kelch domain-containing protein 4	2	QVLT(0.346)APGS(0.65)AGQPRS(0.006)EDEDS(0.999)LEEAGSPAPGPCPR	81.001	1.5507e-05	95356000.0	1949.3	1528.0	2254.4	2099.8	1652.4	1573.2	1694.6	2040.0	1671.3	1881.2	True	False	1863.611106025917	1780.4760284408337	1781.232248198839	1915.713794149817	1869.719563150063	1877.198634851333	2074.6571871546294	1968.2520437169937	1593.6016277921576	1540.4964507992931	1.20974709487904	1.1557806754549977	1.1562715689962408	1.2435691060215301	1.213712347198172	1.218567322162502	1.3467458403284114	1.2776738581226577	1.0344727681555583	1.0	10.589179643170375	-9.819898417153551	6.466422328070014	1.0093050556486727	1.226575228234734	0.7150976390584809	0.053189728771898946	0.12944483783740984	10.497139904435459	0.05699382370753176	0.01499849500977712	1.5139153165840262e-10	9.819898417153551	0.2172701725860613	
QVLTAPGSAGQPRS(ph)EDEDS(ph)LEEAGSPAPGPCPR	ddPTM_K562_Methotrexat_30min_R1	1	QVLTAPGSAGQPRSEDEDSLEEAGSPAPGPCPR	33	1	Q8TBB5-2;Q8TBB5-3;Q8TBB5	Q8TBB5-2	KLHDC4	Kelch domain-containing protein 4	2	QVLT(0.029)APGS(0.24)AGQPRS(0.763)EDEDS(0.94)LEEAGS(0.027)PAPGPCPR	58.248999999999995	0.0035124	95561000.0	1257.1	1254.0	1252.7	1219.0	1082.7	1125.9	907.63	1099.7	1108.9	1400.5	True	False	1201.8393892090382	1461.2021856445076	989.7753891583949	1112.1321626195956	1225.0940274888485	1343.464240388454	1111.1891318170399	1061.022927684106	1057.347481037949	1146.855878877529	1.047942824677608	1.2740939925901074	0.8630338017076089	0.969722685389276	1.0682196865816254	1.1714324922006356	0.9689004104897666	0.9251580318205013	0.9219532292695877	1.0	10.16346838927426	-8.97659223178222	24.214851287119394	0.9435391798864426	1.062447530600147	0.21599877850811233	0.10453278302872325	256.0603075542026	264888.2539415287	0.04567440792046529	0.030791417419766338	1.0553773473159643e-09	8.97659223178222	0.11890835071370442	
QVLTAPGSAGQPRS(ph)EDEDSLEEAGSPAPGPCPR	ddPTM_K562_Methotrexat_30min_R1	4	QVLTAPGSAGQPRSEDEDSLEEAGSPAPGPCPR	33	1	Q8TBB5-2;Q8TBB5-3;Q8TBB5	Q8TBB5-2	KLHDC4	Kelch domain-containing protein 4	1	QVLTAPGS(0.005)AGQPRS(0.495)EDEDS(0.495)LEEAGS(0.005)PAPGPCPR;QVLT(0.004)APGS(0.094)AGQPRS(0.891)EDEDS(0.011)LEEAGSPAPGPCPR;QVLT(0.004)APGS(0.142)AGQPRS(0.558)EDEDS(0.295)LEEAGS(0.001)PAPGPCPR;QVLT(0.036)APGS(0.232)AGQPRS(0.678)EDEDS(0.051)LEEAGS(0.004)PAPGPCPR	91.249	2.4369e-07	254941000.0	3569.1400000000003	3525.0699999999997	4232.4	4169.0	3321.74	2884.7699999999995	3444.48	3404.23	3487.2700000000004	4109.86	True	False	3412.244879167566	4107.527901554932	3344.0770791681875	3803.510242790067	3758.607033223244	3442.2109749936953	4216.992321497925	3284.501301364068	3325.147578861224	3365.5245286423456	1.013882041306669	1.2204718362911209	0.9936273085245318	1.1301389160650108	1.1167968027674628	1.0227858824675644	1.2529970545777191	0.9759255276291323	0.9880027765545926	1.0	11.716615656035028														
QVPVMQGTGMQGASIQGGSQPGGFS(ph)PGQNQVTPQDHEK	ddPTM_K562_Methotrexat_30min_R1	1	QVPVMQGTGMQGASIQGGSQPGGFSPGQNQVTPQDHEK	38	0	E7EWR4;P33240-2;P33240	E7EWR4	CSTF2	Cleavage stimulation factor subunit 2	1	QVPVMQGT(0.014)GMQGAS(0.017)IQGGS(0.241)QPGGFS(0.729)PGQNQVTPQDHEK	63.085	7.278699999999999e-05	8560800.0	1157.6	1041.0	1804.3	1393.7	1105.2	840.23	940.32	1340.9	1449.5	2020.0	True	False	1106.713290071102	1213.0075560254636	1425.6020872184013	1271.516484858843	1250.5531718672535	1002.5925559122398	1151.2106964624345	1293.7397869706454	1382.1130613802034	1654.1584257997931	0.6690491508006563	0.7333079692405937	0.8618292329098504	0.768678782532005	0.756005683834428	0.6061043127882275	0.6959494801145295	0.7821135912934798	0.8355385069673392	1.0	10.691881698838912	-10.060447972016945	1.7384887048545625	0.9984085446335845	0.73194895277144	0.6267479185629473	0.06403188154454434	0.3109465323803286	2.088186183136838	0.06746063524488016	0.019285465574703342	8.700656596946186e-11	10.060447972016945	-0.2664595918621445	
QVS(ph)ASELHTSGILGPETLR	ddPTM_K562_Methotrexat_30min_R1	5	QVSASELHTSGILGPETLR	19	0	A0A075B730;P58107	A0A075B730	EPPK1	Epiplakin	1	QVS(0.869)AS(0.131)ELHTSGILGPETLR;QVS(0.996)AS(0.004)ELHTSGILGPETLR;QVS(0.626)AS(0.373)ELHT(0.001)SGILGPETLR;QVS(0.864)AS(0.136)ELHTSGILGPETLR;QVS(0.801)AS(0.198)ELHT(0.001)SGILGPETLR	140.59	2.9091000000000002e-09	406190000.0	7882.849999999999	6519.960000000001	10308.16	7474.5	8309.939999999999	7416.92	6278.7	8351.44	8196.79	8042.5199999999995	True	False	7536.329352658073	7597.272569628998	8144.618085341259	6819.222189909899	9402.842766039235	8850.13481998573	7686.858303427222	8057.715121558752	7815.723022001123	6585.941694387798	1.1443055074538766	1.1535590386569934	1.2366672016367357	1.0354209779477535	1.427714243819051	1.343791857059312	1.1671616087912788	1.2234719794779119	1.1867282439899647	1.0	12.685174024413458	-10.427061751772412	1.7745007673143178	0.9999982358550205	1.219203714423318	0.2823324617736557	0.1028394684964628	3.4152237772842464	12.536142200858274	0.10279821122863571	0.028916943780506927	3.7405739775151274e-11	10.427061751772412	0.21920547856829764	
QVS(ph)FPDDDEEIVR	ddPTM_K562_Methotrexat_30min_R1	2	QVSFPDDDEEIVR	13	0	H7C2T4;C9JG63;Q7Z698-2;Q7Z698	H7C2T4	SPRED2	Sprouty-related, EVH1 domain-containing protein 2	1	QVS(1)FPDDDEEIVR;QVS(1)FPDDDEEIVR	178.85	8.6401e-05	18565000.0	2386.37	2009.83	2491.63	2056.12	1646.22	1510.31	1793.54	2082.35	1836.27	2187.83	True	False	2281.468032158758	2341.92024623118	1968.670913138607	1875.8631519322412	1862.7267848274619	1802.156032419475	2195.787000737233	2009.112570212785	1750.9022084999133	1791.5927864938424	1.273430016774964	1.3071721787931128	1.0988383788881555	1.0470365621438544	1.0397043339702372	1.0058960082923223	1.2256060737074082	1.1214113973659328	0.9772880431866658	1.0	10.807027047244004	-6.8069883955544475	5.110345006835921	1.0692245658183104	1.2916019468010387	0.6366948411541551	0.06836886323766332	0.11573512860070681	6.7208879840210765	0.018727760723179943	0.042517074508469685	1.5595941749748845e-07	6.8069883955544475	0.2223773809827283	
QVSAS(ph)ELHTSGILGPETLR	ddPTM_K562_Methotrexat_30min_R1	1	QVSASELHTSGILGPETLR	19	0	A0A075B730;P58107	A0A075B730	EPPK1	Epiplakin	1	QVS(0.162)AS(0.838)ELHTSGILGPETLR	95.429	0.0011549000000000002	97578000.0	732.66	603.51	1008.8	698.32	770.99	726.87	545.25	781.39	675.04	904.11	True	False	700.4531436623136	703.2297695839844	797.0666660676851	637.0993698117437	872.3886988580655	867.3273402710328	667.536192196425	753.9080708039317	643.6575377399737	740.3669179949754	0.9460891979874596	0.9498395356297604	1.0765833084847458	0.8605184190794266	1.1783193949570638	1.1714831108606056	0.9016288761310581	1.0182897864286369	0.8693764160655567	1.0	9.532096622110602														
QWWREY(ph)LQIR	ddPTM_K562_Methotrexat_30min_R1	1	QWWREYLQIR	10	1	K7EPF5;K7EP44;Q8TAP6-3;Q8TAP6-2;Q8TAP6	K7EPF5	CEP76	Centrosomal protein of 76 kDa	1	QWWREY(1)LQIR	78.77	0.029539999999999997	4719300.0	0.0	151.97	137.17	54.413999999999994	66.344	60.91	51.839	134.6	0.0	59.248999999999995	True	False	0.0	177.08045945167126	108.37989153896149	49.64360910318512	75.06939887292896	72.6799954543572	63.46521534575055	129.86604170799376	0.0	48.51843196545144	0.0	3.649756438496716	2.2337880089804973	1.0231907152014905	1.547234645307245	1.4979873114223992	1.3080640238114511	2.6766331154409024	0.0	1.0	5.600461020609142	-9.773016322351289	24.984696342164106	0.4999998647160595	1.768999515113062	0.21302294449947812	0.9538216056290993	367.21411959414485	792474.4288878123	0.8595079582821076	0.22954295270074718	1.6864896398409366e-10	9.773016322351289	1.2689996503970025	
QY(ph)S(ph)KELGDAWNT(ph)VSVGS(ph)GIK	ddPTM_K562_Methotrexat_30min_R1	1	QYSKELGDAWNTVSVGSGIK	20	1	F8WF52	F8WF52	NSUN3		4	QY(1)S(1)KELGDAWNT(0.537)VS(0.537)VGS(0.926)GIK	44.816	0.033355	0.0	390.33	0.0	488.02	392.42	314.27	219.31	234.04	510.74	347.08	356.57	True	False	373.1715605679455	0.0	385.591271187898	358.0171478713548	355.6020135022817	261.68855365449133	286.5294276417265	492.776984709812	330.94432655663394	291.9917177660557	1.278021046017926	0.0	1.3205555080053142	1.2261209003133398	1.2178496575960784	0.8962190970915028	0.9812929963694875	1.6876402813062865	1.1334031289948683	1.0	8.189783637964613	-6.817282982221267	24.999977737282457	1.1927994099449128	0.6389820566486935	0.2738300928759373	0.3539765638368909	89.44204681103548	40040.75773494421	0.08804266531279778	0.18327565860244227	1.5230600187451016e-07	6.817282982221267	-0.5538173532962194	
QYAENYTRPSS(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	QYAENYTRPSSR	12	1	Q9Y608-2;Q9Y608-5;C9JSU1;Q9Y608-4;Q9Y608	Q9Y608-2	LRRFIP2	Leucine-rich repeat flightless-interacting protein 2	1	QYAENYTRPS(0.046)S(0.954)R;QYAENYTRPS(0.171)S(0.829)R	110.44	0.004621899999999999	17269300.0	5865.3	4848.0	5963.799999999999	5797.6	5731.0	5060.299999999999	4649.5	5858.9	5862.4	5742.9	True	False	5607.4684349119225	5649.049598089771	4712.079880149144	5289.333409354689	6484.726952561738	6038.131357702902	5692.268731072498	5652.839166143869	5589.858303577305	4702.805160161204	1.192366735159342	1.2012085140044653	1.001972167604669	1.1247188070137653	1.37890614892909	1.2839424879545562	1.2103985891853057	1.2020143241380001	1.1886221336428267	1.0	12.199305846436534	-5.07727256629336	2.9864708182755715	1.187239164060385	4.755030619575043	0.0	0.10969482613943451	74763.84813589221	1214.9857013615958	0.029457694416478043	1821977.9576377592	8.370038077293844e-06	5.07727256629336	3.5677914555146586	
RAAS(ph)ALLLR	ddPTM_K562_Methotrexat_30min_R1	1	RAASALLLR	9	1	F5H672;F5H5N2;B4DNC9;B3KQ30;Q9H1K1	F5H672	ISCU	Iron-sulfur cluster assembly enzyme ISCU, mitochondrial	1	RAAS(1)ALLLR	75.73899999999999	0.027738	10449000.0	1695.4	1607.7	2228.7	1866.0	1646.6	1808.6	1569.3	1999.2	1832.3	1951.7	True	False	1620.872246014641	1873.3450987724664	1760.9263269875578	1702.4106771518996	1863.1567614880748	2158.086353287644	1921.2554725609355	1928.8870028426522	1747.116772933387	1598.2282176403255	1.0141682070960727	1.1721386708703792	1.1017990469392693	1.0651862220687058	1.1657639008769962	1.3502992435422714	1.2021158501365579	1.2068908442190576	1.0931585074332408	1.0	10.642257716050283	-6.2587810677013636	23.911133050684906	1.1613785015578137	1.014168113065372	0.1598415365107846	0.09113540506860748	242.3938292146879	2180057.590478642	0.023537404111449202	0.15463441619005142	5.51085434208761e-07	6.2587810677013636	-0.14721038849244183	
RAAS(ph)LNYLNQPSAAPLQVSR	ddPTM_K562_Methotrexat_30min_R1	1	RAASLNYLNQPSAAPLQVSR	20	1	Q9NSK0-3;Q9NSK0-5;Q9NSK0	Q9NSK0-3	KLC4	Kinesin light chain 4	1	RAAS(0.998)LNY(0.002)LNQPSAAPLQVSR	109.37	0.00034609	0.0	681.42	449.04	764.5	980.62	614.0	643.11	483.32	905.74	675.46	885.4	True	False	651.4655927092698	523.2362276250471	604.0418975106514	894.6505671107687	694.751762148474	767.3819057076289	591.71681322765	873.8846108216807	644.0580120316465	725.0454802985824	0.8985168660605793	0.7216598707843433	0.8331089758147305	1.233923376423698	0.9582181822061243	1.0583914065523334	0.8161099259372998	1.2052824747791056	0.8883001543108933	1.0	9.501927684410258	-7.032202229813053	24.32453146016293	1.0225273823997787	0.8019123350285793	0.3557524812130548	0.12665507610129717	435.8262851705723	329208.96448202885	0.032249987714282176	0.055931676178795096	9.28533913023948e-08	7.032202229813053	-0.2206150473711994	
RAASVAAATT(ph)SPTPR	ddPTM_K562_Methotrexat_30min_R1	3	RAASVAAATTSPTPR	15	1	Q9Y2D9	Q9Y2D9	ZNF652	Zinc finger protein 652	1	RAASVAAAT(0.016)T(0.734)S(0.245)PT(0.005)PR;RAASVAAAT(0.01)T(0.49)S(0.49)PT(0.01)PR;RAASVAAAT(0.007)T(0.677)S(0.313)PT(0.003)PR	107.61	0.0014995	5946300.0	5101.8	3607.7000000000003	5612.3	5445.8	4413.1	4081.1000000000004	4161.7	5298.5	4932.1	5365.099999999999	True	False	4877.530980722835	4203.8111045850765	4434.354926617436	4968.375169149953	4993.5000025039635	4869.7148161020705	5095.06716380351	5112.148751781609	4702.80774752211	4393.428401118052	1.110187884132034	0.9568406995127721	1.0093153960330774	1.1308651730583767	1.1365839036396277	1.108408825978093	1.159701877127872	1.1635898630965864	1.0704186612726696	1.0	12.101131467460519	-7.260849578407475	24.986924609873704	1.1198745592266346	1.0185872592059437	0.2993871259284404	0.057561947870838764	50.813084711758485	2152665.1727314913	0.015136930494690724	0.024267844799796552	5.484668982077233e-08	7.260849578407475	-0.10128730002069086	
RAASVAAATTSPT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	RAASVAAATTSPTPR	15	1	Q9Y2D9	Q9Y2D9	ZNF652	Zinc finger protein 652	1	RAASVAAATT(0.025)S(0.089)PT(0.886)PR	115.91	0.00097566	5422500.0	2270.8	1637.0	2459.2	2640.4	2133.9	1710.2	1590.3	1902.2	2472.0	2799.5	True	False	2170.978350979147	1907.4864257576212	1943.0475269564329	2408.920231485462	2414.5452528479295	2040.6719459208941	1946.9652571297104	1835.2985478227754	2357.0772595597527	2292.4834222903555	0.9469984951124243	0.8320611644170169	0.8475732073190693	1.050790687541277	1.0532443678199537	0.8901577765313201	0.8492821532312553	0.8005722222362596	1.0281763595938518	1.0	11.162695585912747														
RAAVAASSSS(ph)	ddPTM_K562_Methotrexat_30min_R1	4	RAAVAASSSS	10	1	P61927	P61927	RPL37	60S ribosomal protein L37	1	RAAVAASS(0.002)S(0.121)S(0.877);RAAVAASSS(0.005)S(0.995);RAAVAASSS(0.009)S(0.991);RAAVAASSS(0.008)S(0.992)	135.55	0.00020878	36975900.0	10946.599999999999	10090.2	13127.4	13949.3	10626.599999999999	10670.5	11493.699999999999	13211.699999999999	12126.599999999999	13392.4	True	False	10465.400571088743	11757.434045925203	10372.138136535412	12726.38652668541	12024.184162291496	12732.423107793767	14071.454804673185	12747.037022537157	11562.837012854898	10966.90658499066	0.9542709687535518	1.0720829939425636	0.9457669814321888	1.1604353906052942	1.0964061806405672	1.1609858266887583	1.2830833102865504	1.1623183733490343	1.0543389718190752	1.0	13.420869024356302	-7.270417905565444	24.948874424343963	1.1439790818268927	0.9988445818645088	0.39441333130292366	0.07838543903780713	597.7375913049627	1660948.1845154366	0.02209196743078576	0.033308784468066	5.365152790281594e-08	7.270417905565444	-0.14513449996238392	
RADGDHCASVT(ph)DSAPERELS(ph)PLISLPSPVPPLS(ph)PIHSNQQTLPR	ddPTM_K562_Methotrexat_30min_R1	1	RADGDHCASVTDSAPERELSPLISLPSPVPPLSPIHSNQQTLPR	44	2	F5GXF9;P51825-3;P51825-2;E7ETI4;E7EMC5;A0A669KBI3;P51825	F5GXF9	AFF1	AF4/FMR2 family member 1	3	RADGDHCAS(0.141)VT(0.422)DS(0.384)APERELS(0.359)PLIS(0.359)LPS(0.357)PVPPLS(0.961)PIHS(0.008)NQQT(0.008)LPR	46.461000000000006	0.00041788	20831000.0	767.17	745.68	762.19	1142.8	697.11	605.73	813.0	909.27	894.48	1141.0	True	False	733.4461253834206	868.8909456071743	602.2167349426335	1042.6124983114628	788.7921838946625	722.77874973843	995.3359454483141	877.2904587208575	852.8958200368149	934.3538434839419	0.7849768377348424	0.9299377871313989	0.6445274872495169	1.115864728959486	0.8442114188276669	0.7735599899106659	1.0652666036423495	0.9389274361516927	0.9128188704790972	1.0	9.867825197488436	-3.0000282224773223	0.15284007820794393	1.0180307651162235	0.20686565881163554	0.16440365400554724	0.12402023773541321	128.18717433471164	1.2812266112421666	0.41264005636979273	23.158192777922288	0.0009999350174558874	3.0000282224773223	-0.8111651063045879	
RADLNQGIGEPQS(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	1	RADLNQGIGEPQSPSR	16	1	Q96C19	Q96C19	EFHD2	EF-hand domain-containing protein D2	1	RADLNQGIGEPQS(0.5)PS(0.5)R	124.94	0.00015831	51575000.0	1241.9	1247.7	1729.6	1478.8	1114.4	1336.7	1003.1	1389.6	1490.2	1758.8	True	False	1187.3075630090725	1453.861217726197	1366.5805963825019	1349.1558999851163	1260.963133124201	1594.998356983077	1228.0707095685166	1340.7269803672218	1420.9209272637318	1440.2642768795429	0.8243678483656326	1.009440587442822	0.9488401665722883	0.9367419033041486	0.875508164276758	1.1074345053109134	0.8526703947897937	0.9308895609575367	0.9865695831478094	1.0	10.49211784352504	-6.245798712311372	23.826868447991334	0.9561365386554529	0.8243676592445605	0.2612816492389284	0.06845111377651064	2136.359189883175	3254412.6782822493	0.016334740596904825	0.36487074809098685	5.678077131032142e-07	6.245798712311372	-0.13176887941089244	
RADLNQGIGEPQS(ph)PSRR	ddPTM_K562_Methotrexat_30min_R1	2	RADLNQGIGEPQSPSRR	17	2	Q96C19	Q96C19	EFHD2	EF-hand domain-containing protein D2	1	RADLNQGIGEPQS(0.868)PS(0.132)RR;RADLNQGIGEPQS(0.967)PS(0.033)RR	118.44	0.0013319	299274000.0	2636.5	2174.53	2831.7	3347.3999999999996	2776.15	2236.08	2175.31	2520.7599999999998	2703.6000000000004	3189.9	True	False	2520.6026168559624	2533.8341218098485	2237.3648674701253	3053.9386391737767	3141.2623851604017	2668.1708132585627	2663.178641443018	2432.103442019631	2577.9102261107405	2612.178199237011	0.9649428272512967	0.9700081420746693	0.8565131077671636	1.1691157364630786	1.2025452115318664	1.0214352198628358	1.0195241052930093	0.9310633718365853	0.9868814565804584	1.0	11.351037603593237	-7.2478116441573865	24.988123927126175	1.0485943054036004	0.9344400463833316	0.2955680726098534	0.0824988023056543	1172.4630698791073	2149852.6330915885	0.025247758947370438	0.043440167187598654	5.651820441438301e-08	7.2478116441573865	-0.11415425902026888	
RADLNQGIGEPQSPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	3	RADLNQGIGEPQSPSR	16	1	Q96C19	Q96C19	EFHD2	EF-hand domain-containing protein D2	1	RADLNQGIGEPQS(0.361)PS(0.639)R;RADLNQGIGEPQS(0.019)PS(0.981)R;RADLNQGIGEPQS(0.223)PS(0.777)R	202.81	7.7356e-16	157700000.0	3879.9	3517.7	4711.299999999999	4295.9	3668.9	3412.3	3806.8999999999996	3680.32	4049.0	3923.6000000000004	True	False	3709.3442416610837	4098.940134323512	3722.4625137239127	3919.285116815026	4151.424658219118	4071.67868147928	4660.694232136762	3550.8810595747664	3860.762873769189	3212.998019538647	1.1544807121274563	1.2757369003645005	1.1585635879907636	1.219821827770001	1.2920719629995974	1.2672521603558071	1.4505748848254783	1.10516129732462	1.201607610801937	1.0	11.649704376208215	-10.119608423006246	1.4628559658539184	1.0042708750222114	1.2515599147940097	0.4019830900861626	0.08922785228814015	0.5660663392085886	2.5509143152977076	0.08543794662921263	0.025207805584615765	7.592618468566234e-11	10.119608423006246	0.2472890397717984	
RAEDGSVIDYELIDQDAR	ddPTM_K562_Methotrexat_30min_R1	1	RAEDGSVIDYELIDQDAR	18	1	P07355;H0YN42;H0YMU9;H0YMD0;P07355-2;H0YN28;H0YM50;H0YNA0;H0YNP5;H0YL33	P07355	ANXA2	Annexin A2;Annexin	0		224.15	1.7049999999999997e-44	73154000.0	1583.0	1312.6	1498.6	1777.7	1439.3	1438.4	1558.4	1710.4	1607.5	1708.6	False	True	1513.4132154306794	1529.4848396148163	1184.064339580722	1621.851801057304	1628.5931779483708	1716.3504426456652	1907.9108700942852	1650.2442625360509	1532.7676758666266	1399.1559833274885	1.08166153986024	1.0931481963700562	0.8462704328110486	1.1591643965243945	1.1639825704602516	1.2267041438537978	1.3636155602585998	1.179456959910518	1.095494493917241	1.0	10.450341093361036	-7.494581086154157	23.814629911893057	1.1900311563584776	1.0134852238900969	0.31544200033482206	0.10782893965861381	439.3679695555259	369761.11831013235	0.030725625954904037	0.045438128202898664	3.201982203859086e-08	7.494581086154157	-0.17654593246838068	
RAELPGSSS(ph)PLLAQPR	ddPTM_K562_Methotrexat_30min_R1	2	RAELPGSSSPLLAQPR	16	1	Q9C0H5;Q9C0H5-2	Q9C0H5	ARHGAP39	Rho GTPase-activating protein 39	1	RAELPGSS(0.054)S(0.946)PLLAQPR;RAELPGSS(0.094)S(0.906)PLLAQPR	134.83	1.4647e-05	36087000.0	1884.22	1238.13	1962.4099999999999	2176.1	1353.19	1605.1	1769.94	1889.06	1945.1599999999999	1993.9499999999998	True	False	1801.3919449013238	1442.709937888384	1550.5269589193954	1985.3246916132086	1531.1582036183943	1915.2628583777496	2166.894099983752	1822.6206890705982	1854.729936167171	1632.8263332294543	1.1032354808600344	0.883566064882692	0.9495969824621308	1.215882333111674	0.9377348787546942	1.1729740140763676	1.3270817942395636	1.1162367068552617	1.1359015336914788	1.0	10.673155639240651	-7.600325941124556	1.156885698157156	1.1550065034039847	0.9766264636509345	0.1901940865110996	0.1191084683971861	0.7109355668819473	1.9740727691945628	0.04797786845077175	0.0849989037691738	2.510001949967875e-08	7.600325941124556	-0.17838003975305017	
RAGELTEDEVER	ddPTM_K562_Methotrexat_30min_R1	4	RAGELTEDEVER	12	1	P62269	P62269	RPS18	40S ribosomal protein S18	0	;;;	178.15	1.1323000000000002e-08	86979000.0	9253.5	7282.81	10249.1	10174.599999999999	8749.6	8374.1	8575.199999999999	10359.5	10349.7	11558.0	False	True	8846.72721982805	8486.170565896073	8097.953972238614	9282.608615085583	9900.325762368551	9992.276308230716	10498.406887341189	9995.1505131795	9868.54470601358	9464.734200690107	0.9347042433778018	0.8966094964692528	0.8555923283770783	0.9807574537495998	1.0460225878975749	1.0557376569013575	1.1092130708304215	1.0560413320905218	1.0426647486090026	1.0	13.208346275775359	-7.555752371849689	2.8866514501783773	1.0580316255498492	0.8961755120173401	0.8305414528992133	0.03141506933502275	0.09724283081460479	1.6494880633645441	0.00978804961269964	0.013912869037645373	2.7812986701994855e-08	7.555752371849689	-0.16185611353250906	
RAGGGGGLGAGS(ph)PALSGGQGR	ddPTM_K562_Methotrexat_30min_R1	1	RAGGGGGLGAGSPALSGGQGR	21	1	A0A3B3ITT1;Q6IQ22	A0A3B3ITT1	RAB12	Ras-related protein Rab-12	1	RAGGGGGLGAGS(1)PALSGGQGR	134.15	2.1588e-09	18036000.0	3482.5	2932.6	3841.7	4875.8	3144.9	2924.5	2952.0	3969.0	4026.0	4761.0	True	False	3329.4134698277594	3417.16230432303	3035.379669936782	4448.34618416786	3558.509473584264	3489.61823520387	3614.0611450964634	3829.408020349386	3838.8321387490137	3898.73676496674	0.8539723686259599	0.8764793599375469	0.7785546583221751	1.1409711535643543	0.9127339669506058	0.8950638233801456	0.9269826005109363	0.9822176389951924	0.9846348625647114	1.0	11.928791034756093	-7.216087013048359	24.999675990244164	0.9685340315055615	0.8403498525850621	0.46887642112013117	0.06835115961346173	429.90654906491443	236977.74246204115	0.018709035423164676	0.032404810677037606	6.080131706272257e-08	7.216087013048359	-0.12818417892049938	
RAGS(ph)SASSPPSASSSPHPSAAVPAADPADSASGSSNKR	ddPTM_K562_Methotrexat_30min_R1	1	RAGSSASSPPSASSSPHPSAAVPAADPADSASGSSNKR	38	2	G4U4J3;Q8NDF8-4;Q8NDF8-2;Q8NDF8;Q8NDF8-3;Q8NDF8-5	G4U4J3	PAPD5	Non-canonical poly(A) RNA polymerase PAPD5	1	RAGS(0.249)S(0.249)AS(0.217)S(0.217)PPS(0.019)AS(0.019)S(0.019)S(0.009)PHPS(0.001)AAVPAADPADSASGSSNKR	46.093999999999994	0.0039832	50213000.0	2095.4	1684.5	2920.6	2327.8	1851.7	1739.3	1412.1	2223.0	2001.5	2564.4	True	False	2003.2887249611172	1962.8349933956717	2307.6059723605076	2123.725388142654	2095.2310064663343	2075.3951090750847	1728.7993709318134	2144.8158299916054	1908.4507018644204	2099.962310455936	0.9539641330639742	0.9347001056268998	1.0988797088741507	1.011315954371371	0.9977469576639333	0.9883011227113323	0.8232525709266005	1.0213592021686957	0.9088023591480862	1.0	11.03614771969336	-8.547670414219867	24.99981687933948	0.9352253783255929	1.0010382779749352	0.17015317909710492	0.06415372944300408	389.3494062831316	392614.5214185146	0.02428575437489765	0.01881235738015091	2.833541552760373e-09	8.547670414219867	0.06581289964934223	
RAHT(ph)PTPGIYMGR	ddPTM_K562_Methotrexat_30min_R1	1	RAHTPTPGIYMGR	13	1	Q13595;Q13595-4;Q13595-3;Q13595-2	Q13595	TRA2A	Transformer-2 protein homolog alpha	1	RAHT(0.95)PT(0.05)PGIYMGR	61.495	0.032468000000000004	62276000.0	1297.1	1275.2	1471.7	1642.6	1072.8	979.27	1033.0	1436.6	1480.0	1406.9	True	False	1240.0810371036866	1485.9051253061216	1162.8102819704723	1498.5958083010228	1213.89200396235	1168.500068110136	1264.6765456926314	1386.0739637273691	1411.1951230373932	1152.0967768602618	1.0763688103383147	1.2897398509833238	1.0092991364314092	1.3007551434915505	1.0536371842567729	1.0142377720164941	1.0977172847746144	1.2030881359678403	1.2248928661038667	1.0	10.170046193831327	-5.925703316761806	16.908370636692865	1.1360278167997746	0.00017703153792061757	0.022172778085459588	0.10991315599931127	42281350.436760746	128420143.36162332	0.026580849600439438	1747924254.4173102	1.1865790690836138e-06	5.925703316761806	-1.135850785261854	
RALDPQSS(ph)PGLGR	ddPTM_K562_Methotrexat_30min_R1	1	RALDPQSSPGLGR	13	1	B7Z6T1;Q08493-3;Q08493	B7Z6T1	PDE4C	cAMP-specific 3,5-cyclic phosphodiesterase 4C	1	RALDPQS(0.126)S(0.874)PGLGR	83.53	0.024569999999999998	43374000.0	0.0	124.34	0.0	57.67	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	144.88507158137	0.0	52.61416063845123	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
RALLETAS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	RALLETASPR	10	1	Q96BT3;H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2	Q96BT3	CENPT	Centromere protein T	1	RALLET(0.001)AS(0.999)PR;RALLET(0.001)AS(0.999)PR;RALLET(0.037)AS(0.963)PR;RALLET(0.002)AS(0.998)PR	99.669	0.004855399999999999	89889000.0	9709.5	8587.9	11297.9	10477.300000000001	8351.5	9808.6	8491.800000000001	11402.000000000002	10933.9	13338.6	True	False	9282.682005827028	10006.904505659064	8926.625184938632	9558.771376057664	9449.86863449997	11703.973131072213	10396.30231433948	11000.985197284877	10425.585375526043	10922.850286323324	0.849840633396763	0.916144068933076	0.8172432058430574	0.8751169452561622	0.8651467690930729	1.0715127301274965	0.9517939037722468	1.0071533444946497	0.9544748030264669	1.0	13.415061752050581	-8.237253619412039	24.49796616120397	0.9946094705274474	0.8654988160241044	0.747400267902155	0.038439356050949954	296.2155781774017	300039.5603117876	0.012025805017491153	0.01201949016824243	5.7909042027888945e-09	8.237253619412039	-0.12911065450334303	
RALS(ph)PLPTR	ddPTM_K562_Methotrexat_30min_R1	1	RALSPLPTR	9	1	Q86UU1-3;Q86UU1-2;Q86UU1	Q86UU1-3	PHLDB1	Pleckstrin homology-like domain family B member 1	1	RALS(0.999)PLPT(0.001)R	76.843	0.031524	55872000.0	1177.7	961.51	1400.2	1118.8	864.24	924.48	1069.1	1235.2	1125.6	1353.1	True	False	1125.9297181381623	1120.3831846244418	1106.3171548651585	1020.7165410490597	977.9027083374554	1103.1226760407842	1308.8728896418113	1191.7573158819753	1073.2711016830328	1108.0404781929203	1.0161449335988313	1.0111392197978641	0.9984447108551735	0.9211906614763069	0.8825514298288959	0.9955617125466784	1.181250067485282	1.0755539525285096	0.9686208426549614	1.0	10.113794870581232	-8.537393750376317	24.99144909211067	1.0663314687473522	0.964865017300724	0.2995194958222347	0.06466844070434671	284.20201489810194	489325.0312340871	0.025986212894841616	0.020137355210269346	2.9013909336808837e-09	8.537393750376317	-0.10146645144662814	
RALS(ph)SAGPIPIRPPIVPVK	ddPTM_K562_Methotrexat_30min_R1	1	RALSSAGPIPIRPPIVPVK	19	2	Q765P7;A0A087WXN9	Q765P7	MTSS1L	MTSS1-like protein	1	RALS(0.837)S(0.163)AGPIPIRPPIVPVK	77.24	0.0057553000000000005	6157900.0	2229.9	1707.2	1848.3	1932.4	1573.4	1338.4	1374.0	1805.0	2337.5	2628.0	True	False	2131.876266006868	1989.2857825616459	1460.3670885139788	1762.9894922445496	1780.3296784436643	1597.0268579233564	1682.1544760713211	1741.5171269162615	2228.8301352026374	2152.0437341593347	0.9906286903781977	0.9243705185846198	0.6785954510745342	0.8192163868515602	0.8272739304432049	0.7420977708648715	0.7816544103498114	0.8092387246937435	1.0356806880011191	1.0	11.071491681522085	-9.759598140928139	24.99994078274975	1.0178404199949098	0.8164145216777166	0.4724160807100525	0.08279145510823072	40.9839559070923	556536.7822306118	0.06630560450540854	0.02213174522212727	1.7394095856048075e-10	9.759598140928139	-0.20142589831719326	
RALVEFESNPEET(ph)REPGSPPSVQR	ddPTM_K562_Methotrexat_30min_R1	2	RALVEFESNPEETREPGSPPSVQR	24	2	Q9H6F5;H0YG79	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	1	RALVEFES(0.001)NPEET(0.87)REPGS(0.126)PPS(0.003)VQR;RALVEFES(0.001)NPEET(0.659)REPGS(0.247)PPS(0.093)VQR	86.439	0.00030149	159582000.0	1607.5900000000001	1578.46	2047.5	1930.6	1316.69	1399.57	1678.71	1688.35	1533.04	1809.88	True	False	1536.9222684739154	1839.2736857674865	1617.7577307430452	1761.3472954498682	1489.8578138489825	1670.0170946979922	2055.203450164257	1628.9697735341101	1461.7693050143544	1482.093193904222	1.0369943501496415	1.240997322794768	1.0915357667094112	1.1884187193451834	1.0052389552672503	1.1267962781063243	1.3866897564992604	1.0991007719581902	0.9862870371624005	1.0	10.533420451709517	-9.638050089421675	4.82772834985677	0.9960651473975993	1.155094570122231	0.27699953682066225	0.10201169346469342	0.2791914636115614	10.295755763241647	0.07602225614007434	0.026516593741643554	2.3011763955647706e-10	9.638050089421675	0.15902942272463172	
RALVEFESNPEETREPGS(ph)PPSVQR	ddPTM_K562_Methotrexat_30min_R1	1	RALVEFESNPEETREPGSPPSVQR	24	2	Q9H6F5;H0YG79	Q9H6F5	CCDC86	Coiled-coil domain-containing protein 86	1	RALVEFESNPEET(0.032)REPGS(0.967)PPSVQR	107.06	9.261100000000001e-07	429780000.0	631.56	652.31	561.91	659.86	344.64	507.74	556.89	532.71	522.79	769.8	True	False	603.7973786085914	760.0931401258125	443.97276995449323	602.0110982987416	389.9662008254887	605.8535690690418	681.7867585002608	513.974287357098	498.4856070085933	630.3817604854853	0.9578281233003632	1.205766390735085	0.704291903389733	0.9549944748323711	0.6186191055482922	0.961089941121467	1.0815458207026583	0.8153381325012692	0.7907678144505437	1.0	9.300081982123231	-6.755552667239559	24.999996491409025	0.864697465272393	1.0817972255426413	0.26430098913278754	0.14411742195614624	184.25675895945923	782488.8948559123	0.03650155308245677	0.0912974444763252	1.7556879676029077e-07	6.755552667239559	0.21709976027024835	
RAPFDLFENK	ddPTM_K562_Methotrexat_30min_R1	1	RAPFDLFENK	10	1	P08238;Q58FF7	P08238	HSP90AB1;HSP90AB3P	Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3	0		129.0	0.0020449	16578000.0	8629.8	6483.7	9890.4	8899.7	6490.3	5163.7	5752.9	8307.2	9427.8	11877.0	False	True	8250.44432503075	7555.021220943609	7814.540200313073	8119.477118675648	7343.8882115183105	6161.511944305767	7043.13426884331	8015.031067434222	8989.50363579184	9725.960209516905	0.8482909807668806	0.7767892381002114	0.8034723597436172	0.8348252454015487	0.7550810463250998	0.6335119424277198	0.7241582442370641	0.8240863518638982	0.9242792939863729	1.0	13.247624973951009	-9.80137715274562	2.3334975045341024	0.9948115925736459	0.7669941310666489	0.647271261912443	0.05759980326396272	0.19083668964697414	2.0086705528547566	0.0605386889550571	0.017132544680553835	1.5798754379900979e-10	9.80137715274562	-0.227817461506997	
RAPFDLFENR	ddPTM_K562_Methotrexat_30min_R1	2	RAPFDLFENR	10	1	P07900;P07900-2	P07900	HSP90AA1	Heat shock protein HSP 90-alpha	0	;	166.69	1.7031000000000002e-08	156077000.0	7366.7	6161.9	7370.1	7486.4	7063.299999999999	5708.3	6386.3	8831.5	8876.099999999999	9545.900000000001	False	True	7042.868688637516	7180.049240608361	5823.216728375742	6830.07893538584	7992.247755021692	6811.348186703449	7818.590342455805	8520.891139258147	8463.452048373108	7817.04500833774	0.9009630469218893	0.9185119483065592	0.7449383650937969	0.8737417947703778	1.0224129126155828	0.8713456529210712	1.00019768776007	1.0900399230360933	1.0826919941417639	1.0	12.932407629088356	-8.635617712757183	0.9833999455748912	1.0682785119919287	0.8662183370002642	0.5451347033305808	0.06908541626853971	0.42468932689870575	0.8306434998727663	0.05032614212413683	0.03209561446359559	2.314100878679895e-09	8.635617712757183	-0.2020601749916645	
RAPS(ph)PDGFSPYSPEETNR	ddPTM_K562_Methotrexat_30min_R1	5	RAPSPDGFSPYSPEETNR	18	1	Q13233	Q13233	MAP3K1	Mitogen-activated protein kinase kinase kinase 1	1	RAPS(1)PDGFSPYSPEETNR;RAPS(0.998)PDGFS(0.001)PYS(0.001)PEETNR;RAPS(1)PDGFSPYSPEETNR;RAPS(0.952)PDGFS(0.024)PYS(0.023)PEETNR;RAPS(1)PDGFSPYSPEETNR	143.28	1.1922e-09	95556000.0	4419.51	4336.05	6438.93	4974.450000000001	4660.34	4674.049999999999	4531.119999999999	4742.48	4873.14	5153.490000000001	True	False	4225.233632171853	5052.5085622518845	5087.486586184772	4538.347691831866	5273.256396109155	5577.244011712987	5547.3390026319385	4575.684290336744	4646.588785052998	4220.143022660877	1.0012062646890498	1.1972363342003953	1.205524684558444	1.0754013945646692	1.2495444746287936	1.3215770133298546	1.3144907584516508	1.084248629908209	1.1010500734459088	1.0	12.043076178046466	-9.468374624264758	13.954888351651856	1.0645529799838276	1.197975052802481	0.29269041378772287	0.09529517029422924	3.7340649525578704	955.5206882380928	0.055261767271399594	0.026520547202974788	3.401146787607708e-10	9.468374624264758	0.13342207281865348	
RAPS(ph)WR	ddPTM_K562_Methotrexat_30min_R1	1	RAPSWR	6	1	A0A2R8Y7R9;Q13136-2;Q13136;M0QZB5;O75335-2;O75335-1;B1APN9;O75335	A0A2R8Y7R9;B1APN9	PPFIA1;PPFIA4	Liprin-alpha-1;Liprin-alpha-4	1	RAPS(1)WR	87.696	0.01626	8943200.0	1815.5	1603.4	2056.2	1926.3	1644.5	1692.6	1508.0	1949.0	1744.0	1989.8	True	False	1735.6927938183196	1868.3345968599704	1624.631719635581	1757.424269773689	1860.7805746794245	2019.6709950097688	1846.2073871292225	1880.4525652962827	1662.9218206602793	1629.4279384437766	1.0652160509019097	1.1466199595450457	0.9970565014290989	1.0785529254225004	1.1419839630690307	1.2394969715191597	1.1330402183311563	1.154056906064992	1.0205556081531852	1.0	10.670149834867653	-6.2046567026144706	20.51569765496217	1.1086961289697144	1.0652135125163793	0.012016023820912047	0.07433775085287275	27159.692126533944	9809821.219930682	0.019032373630567374	16.249894314170145	6.242280749776726e-07	6.2046567026144706	-0.043482616453335066	
RAPSPDGFSPYS(ph)PEETNR	ddPTM_K562_Methotrexat_30min_R1	1	RAPSPDGFSPYSPEETNR	18	1	Q13233	Q13233	MAP3K1	Mitogen-activated protein kinase kinase kinase 1	1	RAPS(0.025)PDGFS(0.201)PY(0.305)S(0.469)PEETNR	112.84	0.00056078	15993000.0	2205.0	1709.9	2280.2	1997.0	1878.5	1580.9	1856.3	1843.1	1951.7	1801.6	True	False	2108.070840192451	1992.4319116694915	1801.6171807767005	1821.926110542519	2125.5556762148353	1886.3865508749527	2272.622528334202	1778.2771283209747	1860.965892994649	1475.3127821390635	1.4288975637667483	1.3505149116790367	1.2211764193925891	1.234942266209406	1.440749176681694	1.2786349943636164	1.5404343782876435	1.2053560098236535	1.2614043039038982	1.0	10.526805138392623	-10.172513583080113	1.434219614434271	1.0027462699801544	1.3431344493856268	0.5125730309563625	0.10068785436569666	0.5561606223936378	2.26719368075947	0.09599948407083497	0.02836321210784678	6.72181285507967e-11	10.172513583080113	0.3403881794054724	
RAPSTSPS(ph)FEGTQETYTVAHEENVR	ddPTM_K562_Methotrexat_30min_R1	3	RAPSTSPSFEGTQETYTVAHEENVR	25	1	Q9BUT9	Q9BUT9	FAM195A	Protein FAM195A	1	RAPS(0.115)T(0.115)S(0.115)PS(0.601)FEGT(0.033)QET(0.022)Y(0.001)TVAHEENVR;RAPS(0.005)T(0.005)S(0.005)PS(0.978)FEGT(0.007)QET(0.001)YTVAHEENVR;RAPS(0.22)T(0.22)S(0.22)PS(0.328)FEGT(0.012)QETYTVAHEENVR	121.33	6.7675e-10	160738000.0	2714.14	2428.27	3268.34	2850.9900000000002	2677.71	2783.02	2017.23	2885.24	3023.53	3295.48	True	False	2594.8296554194735	2829.5003439672955	2582.3600985087805	2601.0481331475316	3029.87579971106	3320.799227538749	2469.6451774129196	2783.7644738304007	2882.9667502413827	2698.636638145892	0.961533545769341	1.0484925254373312	0.9569128581471421	0.9638378492239663	1.1227431499606213	1.2305470031046182	0.9151455006961212	1.0315447565193496	1.0683049023680844	1.0	11.39801502077193	-7.7437072378271266	24.98821180926148	1.0641046704423431	0.9855525389193122	0.18681364661331878	0.08021700650494885	456.3984705451334	643156.0676894884	0.02492937715424357	0.03211098777759448	1.804233582574768e-08	7.7437072378271266	-0.07855213152303098	
RAQS(ph)TDSLGTSGSLQSK	ddPTM_K562_Methotrexat_30min_R1	2	RAQSTDSLGTSGSLQSK	17	1	I3L456;Q15276-2;Q15276	I3L456	RABEP1	Rab GTPase-binding effector protein 1	1	RAQS(0.892)T(0.106)DS(0.002)LGTSGSLQSK;RAQS(0.968)T(0.032)DSLGTSGSLQSK	229.22	1.7028999999999998e-40	77865000.0	7091.4	5821.700000000001	9748.2	8501.8	5161.5	4813.299999999999	5113.4	6575.1	6059.0	7931.7	True	False	6779.670547002607	6783.636973019639	7702.186037035096	7756.460393896038	5840.3277204061105	5743.4021034388	6260.210114951308	6343.850006197846	5777.318412488889	6495.192270255553	1.0437982841631663	1.044408955233705	1.1858287971407586	1.1941848787781706	0.8991770339350282	0.8842543629909859	0.9638221402035572	0.9766993404104798	0.8894761189666185	1.0	12.665156517531326	-7.7698000054633125	24.999993277463588	0.9332531218938721	1.1167786114799343	0.6986664515905008	0.05837710457957233	109.2238957312784	326601.268167713	0.019380202548820225	0.02233184364103394	1.6990258812980656e-08	7.7698000054633125	0.18352548958606218	
RAQT(ph)PPISSLPTS(ph)PSDEVGR	ddPTM_K562_Methotrexat_30min_R1	1	RAQTPPISSLPTSPSDEVGR	20	1	Q15751	Q15751	HERC1	Probable E3 ubiquitin-protein ligase HERC1	2	RAQT(0.944)PPIS(0.025)S(0.031)LPT(0.035)S(0.821)PS(0.144)DEVGR	61.89	0.021533	0.0	598.53	528.24	692.01	612.29	698.58	428.4	577.85	657.13	576.83	625.98	True	False	572.219337859586	615.5226814552268	546.766557876188	558.6114863415523	790.4555146607186	511.1822369503631	707.4475720508103	634.0183654351699	550.0132992038235	512.6089561297792	1.1162882173964883	1.2007645869132892	1.0666348126343719	1.0897419556597183	1.5420243934649394	0.9972167494103343	1.3800921025494197	1.2368460555625818	1.0729685711237835	1.0	9.001714874902737	-6.255329132884454	21.473101252437413	1.189731990937863	1.1162880091517382	0.005799782923102237	0.1656904736001424	566.9080830816007	1991809.3904965024	0.03950428813022787	0.3279988659967017	5.55483121230957e-07	6.255329132884454	-0.07344398178612477	
RAS(ph)AGPAPGPVVTAEGLHPSLPSPTGNSTPLGSSK	ddPTM_K562_Methotrexat_30min_R1	2	RASAGPAPGPVVTAEGLHPSLPSPTGNSTPLGSSK	35	1	Q4KMP7;Q4KMP7-2	Q4KMP7	TBC1D10B	TBC1 domain family member 10B	1	RAS(0.941)AGPAPGPVVT(0.003)AEGLHPS(0.026)LPS(0.007)PT(0.002)GNS(0.009)T(0.01)PLGSSK;RAS(0.998)AGPAPGPVVT(0.001)AEGLHPSLPS(0.001)PTGNSTPLGSSK	55.428999999999995	0.0034716	85196000.0	7546.2	5731.6	10199.3	7212.8	5653.6	5953.0	5199.9	8042.9	7200.6	9741.2	True	False	7214.478083564746	6678.649479457782	8058.606311681347	6580.4650225944315	6397.147495900028	7103.332998518939	6366.10994186555	7760.026648240885	6865.845677664226	7976.974285842054	0.9044128544289499	0.837240943763777	1.010233457312778	0.8249324602028342	0.801951625599949	0.8904796159524171	0.7980607325216593	0.9728032672756363	0.8607080117896435	1.0	12.961625911989888	-10.593468890396938	0.8858047920242561	1.0001055632387938	0.8728207258611325	0.23012410384781656	0.06665030340352152	3.3023370446967917	3.6619400509377225	0.06885287829242535	0.02143326094424032	2.5499467403382127e-11	10.593468890396938	-0.1272848373776614	
RAS(ph)DGGANIQLHAQQLLK	ddPTM_K562_Methotrexat_30min_R1	1	RASDGGANIQLHAQQLLK	18	1	H0Y4E8;Q9Y2K2-7;Q9Y2K2;Q9Y2K2-8;H7C3X8	H0Y4E8	SIK3	Serine/threonine-protein kinase SIK3	1	RAS(1)DGGANIQLHAQQLLK	90.49799999999999	0.0027143000000000002	7684000.0	1895.4	1510.7	2587.9	1906.2	1705.3	1528.5	1691.5	2305.1	2229.3	3121.4	True	False	1812.0804854878788	1760.3174974905564	2044.7351557459983	1739.086405566426	1929.5768403775135	1823.8609924804628	2070.861933242097	2224.028326456883	2125.6603295859873	2556.0842130155797	0.7089283194429846	0.6886774264036453	0.7999482745264056	0.680371326074078	0.754895644889988	0.7135371296428198	0.8101696816940808	0.8700919614197887	0.8316080975588073	1.0	11.319719652910438	-9.814177804250395	0.5343893963681737	1.00170119625262	0.7117912093961352	0.8241963187423386	0.03944742391271483	0.33649442515984296	0.24015109464320974	0.04165801511705391	0.021044829325126226	1.5339888247516059e-10	9.814177804250395	-0.28990998685648495	
RAS(ph)DTSLTQGIVAFR	ddPTM_K562_Methotrexat_30min_R1	2	RASDTSLTQGIVAFR	15	1	Q9H0K1	Q9H0K1	SIK2	Serine/threonine-protein kinase SIK2	1	RAS(0.997)DT(0.003)SLTQGIVAFR;RAS(0.997)DT(0.003)SLTQGIVAFR	155.2	8.1122e-09	20241800.0	2247.91	1304.82	2257.69	1861.07	1828.57	1717.23	1831.48	2468.79	2319.01	2840.99	True	False	2149.094567971434	1520.4193268522051	1783.8317221593495	1697.9128825975804	2069.0590060453337	2049.0603939268717	2242.23601152482	2381.961256376506	2211.1997312668545	2326.4591812440367	0.9237619921713994	0.6535336356252703	0.7667582292183068	0.7298270677973592	0.88935968562274	0.8807635270141166	0.9637977015035442	1.0238568875740128	0.9504571363613828	1.0	11.183920159256315	-8.2770760533084	1.264154954953124	0.990353893206707	0.760254588135875	0.6401152559768324	0.06988687954535383	0.26397379498757373	0.8604926948610007	0.03325960150522077	0.029566722663192546	5.2835271896031745e-09	8.2770760533084	-0.23009930507083198	
RAS(ph)GQAFELILS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	3	RASGQAFELILSPR	14	1	A2A2D0;P16949;P16949-2	A2A2D0	STMN1	Stathmin	2	RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR	98.95700000000001	0.0075283	83173000.0	10650.5	8714.4	11040.099999999999	9953.3	7869.6	8199.9	8184.3	8986.2	9907.4	11375.0	True	False	10182.316772548611	10154.306480526713	8722.933881893188	9080.709642495169	8904.59033779093	9784.41462364445	10019.837611725263	8670.15025257336	9446.807136473422	9314.877273996359	1.093124093107895	1.090117044147616	0.9364518313348417	0.9748608999761169	0.9559535864899911	1.0504072502338666	1.0756811192453268	0.930785237157892	1.0141633495102895	1.0	13.185321046060539	-6.7372612332310355	24.225699244537967	0.9929499357928797	1.0916207887441167	0.44857626614033363	0.04404821988469245	154.46646265683287	154766.65711904893	0.011760348146639291	0.03107455570297584	1.8312125951424599e-07	6.7372612332310355	0.09867085295123701	
RAS(ph)GQAFELILSPR	ddPTM_K562_Methotrexat_30min_R1	2	RASGQAFELILSPR	14	1	A2A2D0;P16949;P16949-2	A2A2D0	STMN1	Stathmin	1	RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR	145.99	1.2776000000000001e-08	47926200.0	2636.7	2200.9	2635.3	2758.4	2316.5699999999997	2179.5	2304.0	2516.5	2608.6	2652.8	True	False	2520.793825095435	2564.5613160964867	2082.1865435053237	2516.575354692281	2621.2395596747406	2600.6575290226815	2820.730649831386	2427.993268634223	2487.326755375232	2172.352213842422	1.1603983042126926	1.1805458156163045	0.9584939910929018	1.1584564135854392	1.2066365403234192	1.197162003680186	1.2984683753663144	1.1176793768353188	1.1449923909786657	1.0	11.085042317808144	-5.093685492286335	11.648188099277933	1.1496095983630008	1.1613323388439099	0.0	0.0942194330372194	0.0	0.0	0.02192551259041911	0.0	8.059618920176994e-06	5.093685492286335	0.011722740480909044	
RAS(ph)ISEPSDTDPEPR	ddPTM_K562_Methotrexat_30min_R1	2	RASISEPSDTDPEPR	15	1	Q8N1F8	Q8N1F8	STK11IP	Serine/threonine-protein kinase 11-interacting protein	1	RAS(1)ISEPSDTDPEPR;RAS(0.993)IS(0.007)EPSDTDPEPR	221.78	1.2352999999999999e-27	85222400.0	3007.9	2391.1000000000004	3237.3	3005.0	2427.1000000000004	2516.7	2617.3999999999996	3268.3	3200.0	3169.8	True	False	2875.676317557765	2786.1886332492677	2557.834970322082	2741.5563155634813	2746.306192036745	3003.016656706301	3204.418577633971	3153.352036509925	3051.2326984592282	2595.718504009992	1.1078536879539442	1.0733785766619255	0.9854053767273355	1.0561839857936028	1.0580138746917733	1.156911526449072	1.234501573527187	1.2148281994517023	1.175486746249848	1.0	11.341918221585914	-8.29090299334333	4.169239273036517	1.1764948225916203	1.0523715233981028	0.34608698362055534	0.0663914648802332	0.20407474241996157	8.278226948590616	0.023091798358158073	0.020993888754476674	5.117961406723919e-09	8.29090299334333	-0.1241232991935175	
RAS(ph)LSDLTDLEDIEGLTVR	ddPTM_K562_Methotrexat_30min_R1	5	RASLSDLTDLEDIEGLTVR	19	1	J3KSI3;Q8WZ73-2;Q8WZ73;J3KSU7;K7EN88;Q8WZ73-3	J3KSI3	RFFL;hCG_2039718	E3 ubiquitin-protein ligase rififylin	1	RAS(0.995)LS(0.005)DLTDLEDIEGLTVR;RAS(0.812)LS(0.188)DLTDLEDIEGLTVR;RAS(0.988)LS(0.012)DLTDLEDIEGLTVR;RAS(0.952)LS(0.048)DLTDLEDIEGLTVR;RAS(0.848)LS(0.152)DLTDLEDIEGLTVR	226.23	3.8336e-45	158222100.0	6833.679999999999	5401.530000000001	6891.36	7087.58	6071.23	5467.1	5782.84	7197.99	7465.429999999999	8060.26	True	False	6533.279609617389	6294.041022188496	5444.9577120065405	6466.222865577846	6869.703161089055	6523.539700353248	7079.789075985648	6944.832611840428	7118.363788768269	6600.468808483681	0.9898205414167047	0.9535748451835226	0.8249349962851208	0.9796611503211278	1.040790186336359	0.9883449024057875	1.072619124703065	1.0521726279372963	1.0784633630294458	1.0	12.688352782414185	-7.566408117343321	4.532200319356139	1.039588007495622	0.9222083715254571	0.5495105461847862	0.04709479432765857	0.15208382297198642	6.938060458822893	0.014482250578605034	0.019390772853669965	2.71388776223407e-08	7.566408117343321	-0.11737963597016499	
RAS(ph)LSEIGFGK	ddPTM_K562_Methotrexat_30min_R1	2	RASLSEIGFGK	11	1	F5H6Z0;Q00537-2;Q00537	F5H6Z0	CDK17	Cyclin-dependent kinase 17	1	RAS(0.997)LS(0.003)EIGFGK;RAS(0.986)LS(0.014)EIGFGK	116.79	0.0017232	21654000.0	10158.0	7642.5	18105.8	10963.8	9154.2	9323.2	8610.5	11750.6	10329.5	15207.9	True	False	9711.466482845768	8905.293224711437	14305.640010396804	10002.62067639763	10358.137754168669	11124.776450830133	10541.623810925852	11337.324737696516	9849.28379960456	12453.601942435982	0.7798118590697593	0.7150777153368305	1.148715052602569	0.8031909741962631	0.8317383036688395	0.8932978990537798	0.8464718769438894	0.9103651128485388	0.790878321398957	1.0	13.60427545139523	-13.23549943935133	2.2771021135997427	1.4746023201357579	0.8619852455766794	0.12750833617978896	0.11114759193495405	14054888.757291995	2064655.1131148953	34462312.29697722	0.027476634015064956	5.814341829053459e-14	13.23549943935133	-0.6126170745590784	
RAS(ph)MQPIQIAEGTGITTR	ddPTM_K562_Methotrexat_30min_R1	1	RASMQPIQIAEGTGITTR	18	1	A0A087WY61;Q14980-5;Q14980-2;Q14980;H0YFY6	A0A087WY61	NUMA1	Nuclear mitotic apparatus protein 1	1	RAS(1)MQPIQIAEGTGITTR	103.71	0.00029648	22404000.0	1140.1	1175.5	1019.2	1519.2	1017.8	1161.1	932.58	1046.9	1331.5	1317.1	True	False	1089.9825691171945	1369.731394916363	805.2838481920942	1386.014094710164	1151.6585399262494	1385.4661422107065	1141.7348044356565	1010.0799336114317	1269.5988556245186	1078.5604270400527	1.0105901735227651	1.2699625914102795	0.7466284020841326	1.2850592882532061	1.0677737760941253	1.2845512476411827	1.0585728678818456	0.9365075041585241	1.177123528543266	1.0	10.07489129134022	-10.794077402195663	0.6467331367118263	0.9984252379726859	1.0977702349113856	0.024150231441765868	0.1631681030480228	14.420871249602577	8.111437068045118	0.2784924730535258	0.06195304272817776	1.6066548812001225e-11	10.794077402195663	0.09934499693869969	
RAS(ph)PNLFSEAQYQEAPVEK	ddPTM_K562_Methotrexat_30min_R1	1	RASPNLFSEAQYQEAPVEK	19	1	F6VUX8;Q9HC77-2;Q9HC77	F6VUX8	CENPJ	Centromere protein J	1	RAS(0.966)PNLFS(0.034)EAQYQEAPVEK	103.03	0.00037691	19902000.0	1275.3	977.57	2008.2	1703.3	1141.9	905.67	794.29	1058.8	1233.2	1571.9	True	False	1219.239339001103	1139.0968266511175	1586.7062636767687	1553.9743335438532	1292.0798651422515	1080.6779097545175	972.429751672991	1021.5614038664468	1175.8688011687245	1287.213677977571	0.9471926532949314	0.8849321959045914	1.2326673425112689	1.2072388292093104	1.0037804035553182	0.839548187098543	0.7554532462713117	0.7936222410808215	0.9134993057378104	1.0	10.330035846045506	-8.165345668075167	4.017622904243582	0.8407494365970151	1.0699648205703385	0.41242803320189136	0.11648610859090698	0.23332076005427912	6.768060182985132	0.04289629739631797	0.0427172639546978	6.8336751794983e-09	8.165345668075167	0.22921538397332342	
RAS(ph)PPDPSPSPSAASASER	ddPTM_K562_Methotrexat_30min_R1	1	RASPPDPSPSPSAASASER	19	1	Q9Y2F5	Q9Y2F5	ICE1	Little elongation complex subunit 1	1	RAS(1)PPDPSPSPSAASASER	81.854	0.003858	15248000.0	981.65	741.42	1155.3	1022.7	927.47	938.08	1149.2	1105.9	931.64	1217.6	True	False	938.4978413945208	863.9270530147932	912.8183181086401	933.0414788441835	1049.4485616284132	1119.3506835630183	1406.937353639856	1067.0048701699122	888.3282597476731	997.0808412147668	0.9412454864252803	0.8664563767590306	0.915490781064986	0.9357731492538132	1.0525210376621474	1.1226278124041449	1.411056451476644	1.0701287458998363	0.890929023032277	1.0	9.961566669815939	-7.839857381384389	2.533424432084504	1.1210475923951095	0.9058591647645117	0.32112587516133095	0.12546547397435068	0.3275814494594683	4.288858850206594	0.04464535983628655	0.0537516588555287	1.445914518825279e-08	7.839857381384389	-0.21518842763059787	
RAS(ph)QEANLLTLAQK	ddPTM_K562_Methotrexat_30min_R1	2	RASQEANLLTLAQK	14	1	A0A0A0MSU2;A0A1C7CYX1;Q6PJG2;H7C1L3	A0A0A0MSU2	ELMSAN1	ELM2 and SANT domain-containing protein 1	1	RAS(1)QEANLLTLAQK;RAS(1)QEANLLTLAQK	145.48	1.3873e-08	33321000.0	8901.4	6944.9	12345.8	10168.3	6730.9	6555.4	5933.6	8107.9	8540.7	11408.5	True	False	8510.105114235414	8092.426681884	9754.585295339433	9276.860926304205	7616.13132873805	7822.138272886115	7264.360843680349	7822.740561398533	8143.644721165851	9342.310099374723	0.9109208561600831	0.8662125957931563	1.0441298984490253	0.9929943266307444	0.8152299857021225	0.8372809497524224	0.77757650585443	0.8373454186585078	0.8716949699315698	1.0	13.18956361798314	-7.764899792639865	24.999879602312284	0.8434793114459738	0.9537939703884973	0.30268215055531733	0.07051096562850416	100.27162655754962	724416.3194909411	0.021702336624690028	0.02560524364221991	1.7183048161554072e-08	7.764899792639865	0.11031465894252357	
RAS(ph)SLNFLNK	ddPTM_K562_Methotrexat_30min_R1	1	RASSLNFLNK	10	1	Q9H0B6;Q9H0B6-2;A8MZ87	Q9H0B6	KLC2	Kinesin light chain 2	1	RAS(0.642)S(0.358)LNFLNK	91.93700000000001	0.010722	13455000.0	2139.0	1678.7	2977.9	2454.6	1619.0	1539.3	1525.9	2237.7	1964.8	2136.7	True	False	2044.9721211662834	1956.076641978816	2352.8794854113403	2239.409029012352	1831.9268777172322	1836.747939630471	1868.121917785465	2158.998822659567	1873.456876853965	1749.7229249536722	1.1687405428607667	1.1179350822248657	1.3447154700071373	1.279864941514466	1.0469811257492305	1.049736454518422	1.0676672809981773	1.2339089760264363	1.0707163117860898	1.0	10.772910768752059	-7.764070873252335	24.999135833061686	1.0879171511508803	1.228315623948986	0.45064259779085714	0.08051200340583707	73.82624070662783	701347.8247314024	0.026211620779257587	0.031087634615855345	1.7215876032626118e-08	7.764070873252335	0.1403984727981058	
RAS(ph)SLNVLNVGGK	ddPTM_K562_Methotrexat_30min_R1	1	RASSLNVLNVGGK	13	1	Q07866-4;Q07866-6;Q07866-7;H0YG16;H0YJK1;Q07866-9;G3V5R9	Q07866-4	KLC1	Kinesin light chain 1	1	RAS(0.5)S(0.5)LNVLNVGGK	137.17	1.3300000000000001e-05	85966000.0	11646.0	8694.8	15397.0	12367.0	9461.7	7880.1	8154.5	10370.0	10652.0	12468.0	True	False	11134.05578452666	10131.467913669747	12165.380112454543	11282.804311006175	10706.079394006878	9402.81779970251	9983.354203146719	10005.281222228043	10156.790844996149	10209.92438260981	1.090513050565868	0.9923156660127969	1.1915249963237131	1.1050820640967491	1.0485953659208438	0.9209488187510952	0.9778088288441196	0.9799564470104863	0.9947958931307893	1.0	13.317684560825123	-8.039213605010769	4.929737459741976	0.9738882164049188	1.0930939854453265	0.5739818952372324	0.04902424520919765	0.15373839954170587	9.026699586938445	0.016652917617838617	0.01726395860033672	9.136637511674795e-09	8.039213605010769	0.1192057690404077	
RAS(ph)VCAEAYNPDEEEDDAESR	ddPTM_K562_Methotrexat_30min_R1	5	RASVCAEAYNPDEEEDDAESR	21	1	P31323	P31323	PRKAR2B	cAMP-dependent protein kinase type II-beta regulatory subunit	1	RAS(0.974)VCAEAY(0.026)NPDEEEDDAESR;RAS(0.998)VCAEAY(0.002)NPDEEEDDAESR;RAS(0.996)VCAEAY(0.004)NPDEEEDDAESR;RAS(0.812)VCAEAY(0.188)NPDEEEDDAESR;RAS(0.991)VCAEAY(0.009)NPDEEEDDAESR	119.66	3.2363e-06	578083000.0	6462.920000000001	4862.66	5714.48	6574.500000000001	4765.36	4667.95	5035.5	5672.429999999999	6188.48	6537.61	True	False	6178.817775281905	5666.131913912372	4515.088740989756	5998.123792569757	5392.088366892271	5569.965273044928	6164.83905695571	5472.927421736068	5900.778915550298	5353.585478263851	1.1541457216604813	1.0583807687235953	0.8433766042069405	1.1203937654349225	1.0071919816699941	1.040417734181999	1.1515346270243818	1.0222919656287845	1.1022106473331028	1.0	12.386289721809474	-8.545385291982333	24.814260305427563	1.0744539988471746	1.0310113339937195	0.027889814684755154	0.08640061702944508	758.8832326575454	836687.8125253174	0.03292053106139911	0.025501653722760094	2.8484900581798224e-09	8.545385291982333	-0.04344266485345516	
RASGQAFELILS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	5	RASGQAFELILSPR	14	1	A2A2D0;P16949;P16949-2	A2A2D0	STMN1	Stathmin	1	RASGQAFELILS(1)PR;RASGQAFELILS(1)PR;RASGQAFELILS(1)PR;RASGQAFELILS(1)PR;RASGQAFELILS(1)PR	114.31	0.001258	327516000.0	8183.300000000001	6947.400000000001	8149.6	7636.6900000000005	6814.92	6725.56	6406.2699999999995	7580.37	7962.749999999999	9122.5	True	False	7823.571930406751	8095.339764391263	6439.110330873521	6967.193244426115	7711.201431434662	8025.179284649588	7843.039123305261	7313.764090505379	7592.563490517568	7470.326851167631	1.047286428864074	1.0836660732088237	0.8619583130913572	0.9326490504678687	1.0322441822246884	1.074274184321029	1.0498923647603684	0.9790420467830292	1.0163629573090007	1.0	12.8669556516716	-7.81341075483654	24.99575735608507	1.0279328733103374	0.9801642980561971	0.10910611420356608	0.06115644345401764	240.47714545409758	115656.33581279992	0.02079797125869311	0.023582710734691325	1.536700544525507e-08	7.81341075483654	-0.047768575254140355	
RASISEPSDT(ph)DPEPR	ddPTM_K562_Methotrexat_30min_R1	1	RASISEPSDTDPEPR	15	1	Q8N1F8	Q8N1F8	STK11IP	Serine/threonine-protein kinase 11-interacting protein	1	RAS(0.287)IS(0.011)EPS(0.009)DT(0.693)DPEPR	96.24700000000001	0.022977	65234000.0	1363.4	1387.7	1764.7	1634.5	1235.7	1383.7	1332.4	1715.8	1761.7	1989.4	True	False	1303.4665684890645	1616.9938381330805	1394.3135860523826	1491.2059227249626	1398.2162092620026	1651.0804418025623	1631.2246171160327	1655.4543414753011	1679.7989515236313	1629.1003823198555	0.8001143346568459	0.9925685707779804	0.8558794787506377	0.9153554556297324	0.8582750482637101	1.0134921455554549	1.0013039311875627	1.0161770013938105	1.0311205925392888	1.0	10.669859787612777	-8.270842682756856	24.40475582281799	1.0127351327631589	0.8905767872557946	0.6485155345559093	0.047000393515160194	306.53510377273676	795559.6207212915	0.015366271589874664	0.013736778770024292	5.359907776895414e-09	8.270842682756856	-0.12215834550736426	
RASS(ph)LNFLNK	ddPTM_K562_Methotrexat_30min_R1	1	RASSLNFLNK	10	1	Q9H0B6;Q9H0B6-2;A8MZ87	Q9H0B6	KLC2	Kinesin light chain 2	1	RAS(0.387)S(0.613)LNFLNK	83.243	0.016855000000000002	11880000.0	3924.1	3033.2	5512.0	4426.1	3532.5	2726.8	2788.5	3622.6	3763.4	4720.2	True	False	3751.601262584671	3534.3847444154067	4355.106525936835	4038.070684963568	3997.0856674095858	3253.7155082078666	3413.8921080967107	3495.1911046907717	3588.440355431704	3865.326040326824	0.970578218614506	0.9143820488986654	1.1267112995126793	1.0446908340550072	1.0340875842576067	0.8417700018735692	0.8832093521942735	0.904242247154717	0.9283667970033108	1.0	11.916374395299645	-8.245958848370108	24.531285381383594	0.9037635489402199	1.0198407941447918	0.41290828536367985	0.0631845174592623	620.4567792247726	983209.8552842943	0.02171255252609368	0.021635133774246328	5.675983857190929e-09	8.245958848370108	0.11607724520457186	
RASS(ph)LNVLNVGGK	ddPTM_K562_Methotrexat_30min_R1	1	RASSLNVLNVGGK	13	1	Q07866-4;Q07866-6;Q07866-7;H0YG16;H0YJK1;Q07866-9;G3V5R9	Q07866-4	KLC1	Kinesin light chain 1	1	RAS(0.34)S(0.66)LNVLNVGGK	133.28	0.00013591	73673000.0	11002.0	7724.9	14259.0	12441.0	8760.2	7984.0	8212.6	9685.6	10118.0	13109.0	True	False	10518.365253422839	9001.308424150913	11266.230760764394	11350.316845898593	9912.319848164607	9526.795004228989	10054.484607120336	9344.951958149664	9647.616388440763	10734.83307119281	0.9798350084873823	0.8385140564790101	1.0495021847146933	1.0573351975409333	0.9233790392851624	0.8874655936471316	0.9366223527128515	0.8705260618562457	0.898720671710339	1.0	13.390012136723335	-7.974285603671974	24.997704014457245	0.910999808384725	0.9777681367660955	0.17481971348109748	0.06464748342759155	390.49244426124295	379607.3045941277	0.020760158995209343	0.02353908777527181	1.0609975873188839e-08	7.974285603671974	0.06676832838137048	
RAT(ph)PEPGDEGEPGR	ddPTM_K562_Methotrexat_30min_R1	1	RATPEPGDEGEPGR	14	1	M0QZR4;M0QZH8;M0QYS3;M0QYC1	M0QZR4	ARHGEF1		1	RAT(1)PEPGDEGEPGR	105.5	0.0021655000000000003	4205400.0	2000.3	1377.3	2648.7	2162.8	1475.8	1573.0	1365.9	1970.8	1842.5	2339.7	True	False	1912.3692070915927	1604.8754149028537	2092.774066627159	1973.1906819636265	1669.8935677177824	1876.95998768189	1672.2378448805084	1901.485846939926	1756.8425771597267	1915.957657843453	0.9981270719959963	0.8376361598247716	1.0922861776510893	1.0298717583271613	0.8715712275172963	0.9796458601253967	0.8727947812597964	0.9924466958628845	0.9169527155089525	1.0	10.903849962910362	-7.744719289331785	24.999316152627365	0.9372560366749901	0.9859775386539532	0.10275012364864822	0.07283042172620922	635.0663914609466	949526.6282481763	0.021464530057790542	0.027633527435556672	1.800034009541877e-08	7.744719289331785	0.04872150197896308	
RAT(ph)PEPGDEGEPGRSGLELEPEEPPGWR	ddPTM_K562_Methotrexat_30min_R1	1	RATPEPGDEGEPGRSGLELEPEEPPGWR	28	2	M0QZR4;M0QZH8;M0QYS3;M0QYC1	M0QZR4	ARHGEF1		1	RAT(0.999)PEPGDEGEPGRS(0.001)GLELEPEEPPGWR	52.927	0.011745	16974000.0	504.78	435.46	544.36	566.82	486.89	497.91	574.49	595.18	692.61	727.38	True	False	482.5904756065057	507.41236344558	430.1062751195532	517.127770644823	550.9245691734052	594.1240606908387	703.3340065198059	574.2471820487643	660.410712274952	595.6444335436898	0.8101989180615893	0.8518712420878553	0.7220856116470454	0.8681819916762343	0.9249218798130437	0.9974475160561714	1.1807950631477147	0.9640771401696377	1.108733121781976	1.0	9.218307569050802	-8.01062320738546	1.6839150145228292	1.0608154275940196	0.8022718411859995	0.7505622588125385	0.06537476596685532	0.17432725412801425	1.00138170175478	0.024721112998753424	0.02713483429433026	9.758359029135683e-09	8.01062320738546	-0.2585435864080201	
RAT(ph)SPSSSVSGDFDDGHHSVSTPGPSR	ddPTM_K562_Methotrexat_30min_R1	3	RATSPSSSVSGDFDDGHHSVSTPGPSR	27	1	C9JCJ2;C9J053;C9JQF1;C9JPI5;E7EVG2;Q86U86-6;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;Q86U86-8;Q86U86;C9J409	C9JCJ2	PBRM1	Protein polybromo-1	1	RAT(0.359)S(0.359)PS(0.092)S(0.092)S(0.092)VS(0.005)GDFDDGHHSVSTPGPSR;RAT(0.283)S(0.283)PS(0.283)S(0.067)S(0.067)VS(0.017)GDFDDGHHSVSTPGPSR;RAT(0.309)S(0.309)PS(0.309)S(0.06)S(0.012)VS(0.001)GDFDDGHHSVSTPGPSR	98.766	2.7929e-07	160121000.0	1547.16	1611.68	2412.0699999999997	2132.24	1743.3899999999999	1518.8700000000001	1705.2599999999998	1664.72	1582.96	2003.65	True	False	1479.1486989170767	1877.9827261240334	1905.8094698868754	1945.309829716165	1972.6763430163332	1812.3701312717037	2087.7079635119217	1606.1708540277211	1509.3685351103188	1640.7695692345321	0.9014969113591883	1.1445743273994096	1.1615338958145063	1.1856081842276671	1.2022872559348146	1.1045854123911065	1.2723955896414507	0.9789131174446681	0.9199149980667207	1.0	10.680156924692472	-9.405203242680086	7.637354234333255	0.9566881960712	1.142703424595664	0.4230556201186815	0.09245106862341346	0.2482862527198462	14.552651899357766	0.050750427125519026	0.024146925444246386	3.93365943576999e-10	9.405203242680086	0.18601522852446395	
RCRDY(ph)DEKGFCMR	ddPTM_K562_Methotrexat_30min_R1	1	RCRDYDEKGFCMR	13	3	A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6	A0A087X0H9	RBM26	RNA-binding protein 26	1	RCRDY(1)DEKGFCMR	47.711999999999996	0.030347000000000002	1572000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
RCYRAPQSTST(ph)T(ph)T(ph)LASTMT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	RCYRAPQSTSTTTLASTMTR	20	2	A0A590UJH5;A0A590UK53;A0A590UJT0;A0A590UJJ8;A0A590UK84;A0A590UK97;A0A590UKB1;A0A590UJ98;E9PP15;A0A590UK45;A0A590UJF9;Q14114-4;Q14114-3;Q14114	A0A590UJH5	LRP8	Low-density lipoprotein receptor-related protein 8	4	RCY(0.006)RAPQS(0.01)T(0.056)S(0.448)T(0.51)T(0.941)T(0.948)LAS(0.049)T(0.052)MT(0.98)R	51.628	0.018749000000000002	7954300.0	2315.9	2447.7	3104.7	2299.6	2790.2	2914.2	2194.4	2876.2	2713.2	2631.8	True	False	2214.0958089803607	2852.140821213763	2453.065898235865	2097.997638359327	3157.1602064278054	3477.3279059774695	2686.55005989149	2775.042415754321	2587.063924206116	2155.1555173365805	1.0273485097338222	1.323403716469864	1.1382315004661254	0.97347853622745	1.4649338207989457	1.6134927980858096	1.2465690008355528	1.2876297758705688	1.2004070719700561	1.0	11.073576263486872	-6.251942558379925	23.125426081024113	1.2646491904842478	1.0273481359200975	0.11092014526106864	0.18467293569622303	1021.9331846143701	2488325.0124568585	0.0483545329510344	0.5628164054884031	5.598316422929647e-07	6.251942558379925	-0.2373010545641503	
RDAS(ph)EETSTSVMQK	ddPTM_K562_Methotrexat_30min_R1	3	RDASEETSTSVMQK	14	1	M0QZH1;M0QX70;M0QYR7;M0R2N0;M0QZC7;Q9H0W8-2;Q9H0W8	M0QZH1	SMG9	Protein SMG9	1	RDAS(1)EETSTSVMQK;RDAS(0.995)EET(0.001)S(0.004)TSVMQK;RDAS(0.996)EET(0.002)S(0.002)TSVMQK	142.54	1.2709000000000001e-05	39864000.0	16582.7	12584.400000000001	22972.2	16220.4	11681.5	10866.7	11348.699999999999	14141.3	15285.300000000001	21073.6	True	False	15853.744363564329	14663.758201774113	18150.649153687624	14798.382715795642	13217.822002503917	12966.535981018933	13893.934863603059	13643.94246363486	14574.689739299632	17256.966832640843	0.9186866103015058	0.8497297551756441	1.0517867554428173	0.8575309241369758	0.7659412068581456	0.7513797822507988	0.8051203318837731	0.7906338695527828	0.8445684505652643	1.0	14.07489129134022	-7.513804842607793	24.45079690751574	0.8110698530113197	0.9349714071032732	0.2764722321565338	0.08002902060548155	360.89836942264355	972488.4448951071	0.022158989730350305	0.030262640426533968	3.063339686686222e-08	7.513804842607793	0.12390155409195347	
RDDMES(ph)LGYVLMYFNR	ddPTM_K562_Methotrexat_30min_R1	1	RDDMESLGYVLMYFNR	16	1	H0Y9X2;U3KQK7;D6REM4;E7ETM0;A0A5F9W493;U3KPX3;A0A590UJ43;P48729-3;P48729;P48729-2	H0Y9X2	CSNK1A1	Casein kinase I isoform alpha	1	RDDMES(0.999)LGY(0.001)VLMYFNR	60.901	0.024401	43200000.0	1791.8	2084.4	3329.3	3207.1	1926.7	2300.0	2293.8	1694.8	2024.8	1890.0	True	False	1713.0346174407405	2428.8116712579026	2630.525427576472	2925.938522343975	2180.0948210610186	2744.442448613061	2808.2430401836973	1635.1929233782157	1930.667489950075	1547.7026855255492	1.1068240906095281	1.5693011932929208	1.699632269283833	1.8905042613855916	1.408600528673716	1.773236212794409	1.8144589826243727	1.0565290986898803	1.2474408088879703	1.0	10.59591264030819	-9.2711554009394	24.739158112788513	1.113988657557899	1.6203441195002863	0.5264021688676915	0.2203582987988151	497.782043863981	1267455.3792501322	0.12058206052808063	0.05908859131251461	5.356049709680351e-10	9.2711554009394	0.5063554619423873	
RDGEAQEAASETQPLSS(ph)PPTAASSK	ddPTM_K562_Methotrexat_30min_R1	2	RDGEAQEAASETQPLSSPPTAASSK	25	1	A0A087WWW8;Q9Y6J0-2;Q9Y6J0;B5MEB3	A0A087WWW8	CABIN1	Calcineurin-binding protein cabin-1	1	RDGEAQEAASETQPLS(0.21)S(0.79)PPTAASSK;RDGEAQEAASETQPLS(0.152)S(0.844)PPT(0.003)AASSK	134.66	4.3161e-13	42905000.0	4610.3	3627.8999999999996	7279.5	5804.9	3819.8999999999996	3431.6	3373.2	4995.799999999999	4420.9	6001.9	True	False	4407.636732217349	4227.348811243786	5751.63243025348	5295.993429688666	4322.28380493641	4094.708133330685	4129.725967018764	4820.094882353601	4215.373323943249	4914.897750399891	0.8967911350462439	0.8601092079483924	1.1702445752377066	1.0775388825246197	0.8794249696414814	0.8331217334068703	0.8402465680354707	0.9807111209915655	0.8576726389883234	1.0	12.262945687692755	-7.783543477262736	24.769125228109036	0.8913804886968042	1.003171810467115	0.2128850341043571	0.09606956750160264	335.50177965264584	375950.03484387515	0.03185417559159599	0.03614869950482488	1.6461011667318114e-08	7.783543477262736	0.11179132177031081	
RDPEDS(ph)DVFEEDTHL	ddPTM_K562_Methotrexat_30min_R1	2	RDPEDSDVFEEDTHL	15	1	Q9NZ53-2;Q9NZ53	Q9NZ53-2	PODXL2	Podocalyxin-like protein 2	1	RDPEDS(1)DVFEEDTHL;RDPEDS(1)DVFEEDTHL	163.64	4.3737e-06	28149000.0	4651.4	3425.7	4687.3	4199.5	3700.1	3401.7	3368.9	4118.200000000001	4017.7999999999997	4761.8	True	False	4446.930025429098	3991.738698056128	3703.4997857445073	3831.3363551443736	4186.728005090503	4059.030381498718	4124.461582559446	3973.3605717820215	3831.0133549592124	3899.3918772145807	1.1404162919387408	1.0236823647762001	0.949763425262607	0.9825471447309828	1.0736874202243998	1.0409393334424675	1.0577191809471678	1.0189692898012288	0.9824643112545507	1.0	11.92903343321777	-9.285853113043194	0.005698068391217855	7.228510015470197e-08	2.0398622620820124	0.09648375865752634	0.049309222024381795	10492.280024797557	58.63267524392255	10472.731073585071	10511.8555547119	5.177819263953652e-10	9.285853113043194	2.0398621897969123	
RDPHLACVAYER	ddPTM_K562_Methotrexat_30min_R1	2	RDPHLACVAYER	12	1	A0A087WVQ6;Q00610-2;Q00610;A0A087WX41;P53675-2;P53675	A0A087WVQ6	CLTC;CLTCL1	Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2	0	;	69.229	0.020137000000000002	27817000.0	4096.4	3076.8	3567.5	4142.200000000001	4133.4	3492.0	3562.1	4461.7	4752.0	5088.3	False	True	3916.327160890866	3585.188903342119	2818.7305027720727	3779.059757180384	4677.014549942189	4166.779578502963	4360.991600592179	4304.779482084368	4531.080557211954	4166.7595633648925	0.9398975634025333	0.8604261534224157	0.6764802383979626	0.9069541209929044	1.1224584665416204	1.0000048035260414	1.0466146496512587	1.0331240419852825	1.0874350891398332	1.0	12.024710138542499	-7.567432975178089	6.037415060967848	1.0460122985283533	0.822907821485015	0.6792878634728534	0.06974175564514601	0.1061317643386655	9.40918605604239	0.02083026435954235	0.02727676246450617	2.7074910197320795e-08	7.567432975178089	-0.22310447704333836	
RDPSSNDINGGMEPTPSTVSTPS(ph)PSADLLGLR	ddPTM_K562_Methotrexat_30min_R1	3	RDPSSNDINGGMEPTPSTVSTPSPSADLLGLR	32	1	O95782-2;O95782	O95782-2	AP2A1	AP-2 complex subunit alpha-1	1	RDPSSNDINGGMEPTPSTVS(0.003)T(0.009)PS(0.585)PS(0.403)ADLLGLR;RDPSSNDINGGMEPTPSTVS(0.019)T(0.165)PS(0.701)PS(0.114)ADLLGLR;RDPSSNDINGGMEPTPS(0.11)T(0.11)VS(0.026)T(0.116)PS(0.465)PS(0.174)ADLLGLR	114.02	1.7559999999999997e-18	90344000.0	2001.28	1378.24	1890.09	1690.9699999999998	1599.05	1645.71	1193.22	2131.38	2093.48	1897.38	True	False	1913.3061274650108	1605.9707339255856	1493.3859386081185	1542.725285500293	1809.3531030350464	1963.720166133478	1460.8299591978332	2056.418157322315	1996.154571740757	1553.746096011886	1.2314149218949182	1.0336120798937152	0.9611518525718595	0.9929069424278002	1.1645101523854158	1.2638616896119015	0.9401986353802931	1.3235226544418512	1.2847366611986561	1.0	10.601535050986433	-7.814945517880332	9.2005478439714	1.1731812956197856	1.0466681245787046	0.13608183656266326	0.13119238616039108	0.604131705486622	97.6592253505533	0.041071887810225395	0.04670536272224852	1.531279548218509e-08	7.814945517880332	-0.12651317104108095	
RDQMEGS(ph)PNSSESFEHIAR	ddPTM_K562_Methotrexat_30min_R1	1	RDQMEGSPNSSESFEHIAR	19	1	E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3	E7EPN9	PRRC2C	Protein PRRC2C	1	RDQMEGS(1)PNSSESFEHIAR	95.624	0.00039233	24896000.0	1088.9	1066.3	1334.2	1177.7	809.64	890.87	893.56	1072.6	938.84	1055.5	True	False	1041.0332598120451	1242.487950998994	1054.1696529217932	1074.452869497208	916.121851312526	1063.0180192156163	1093.963576155961	1034.8760500445321	895.1935333192065	864.3387219958821	1.2044274233232892	1.4375012010683856	1.2196256237225658	1.2430923689455242	1.0599106901019884	1.229862775048369	1.2656653558570674	1.1973038158638258	1.0356975923189884	1.0	9.755452984546912	-7.066347561079217	0.030392273079098153	7.27445734626203e-08	2.514234101415809	0.45458093797753274	0.09025632321694436	459.0146963117499	2.905713838371747	101.18678681831763	140.67383345786237	8.58326337477293e-08	7.066347561079217	2.5142340286712357	
RDS(ph)FDDRGPSLNPVLDYDHGSR	ddPTM_K562_Methotrexat_30min_R1	2	RDSFDDRGPSLNPVLDYDHGSR	22	2	D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991	D6REM6	MATR3	Matrin-3	1	RDS(0.788)FDDRGPS(0.212)LNPVLDYDHGSR;RDS(0.536)FDDRGPS(0.464)LNPVLDYDHGSR	80.031	0.0012118	269658000.0	4959.8	4120.7	5888.2	5604.2	4649.7	4494.9	4030.8	5871.200000000001	5458.5	6578.5	True	False	4741.773130696833	4801.575635076016	4652.347287014018	5112.88848708182	5261.217049611992	5363.475809682976	4934.809506658138	5664.706568172163	5204.735526418656	5387.06990303165	0.8802137741016378	0.8913148931618394	0.8636136843882132	0.9491037946629335	0.9766379765466134	0.9956202362743807	0.9160470525695247	1.0515376020987344	0.9661533301228591	1.0	12.3952850704819	-7.451254059101626	2.948806966291227	0.9838180421841255	0.8795184142499274	0.6797506706463636	0.03240142416958352	0.15262628973990514	2.5935502616501127	0.009507404465670864	0.01452124911155234	3.537903157830791e-08	7.451254059101626	-0.10429962793419811	
RDS(ph)FDNCSLGESSK	ddPTM_K562_Methotrexat_30min_R1	1	RDSFDNCSLGESSK	14	1	Q5UIP0-2;Q5UIP0	Q5UIP0-2	RIF1	Telomere-associated protein RIF1	1	RDS(0.501)FDNCS(0.498)LGESSK	103.79	0.0043452	0.0	955.06	751.98	849.1	780.25	546.7	576.01	552.12	831.86	759.82	872.49	True	False	913.0767059565544	876.2319135254834	670.8855136380561	711.8466939162753	618.6006325188454	687.3157803589606	675.946964576782	802.603012297264	724.4961340447777	714.4736063990405	1.2779712193407353	1.226402075146915	0.9389927180366128	0.99632328967895	0.8658131342830191	0.9619890422867322	0.9460768858678581	1.1233487215047695	1.0140278486930412	1.0	9.480736907015297	-6.711411929067392	5.842610488700574	0.9797280614316605	1.26020957400256	0.7491859179653965	0.06289455081070577	0.09538292241972544	7.149583351849016	0.017438140219026937	0.04654253636139555	1.943515779020247e-07	6.711411929067392	0.2804815125708996	
RDS(ph)GVGSGLEAQESWER	ddPTM_K562_Methotrexat_30min_R1	1	RDSGVGSGLEAQESWER	17	1	A0A0A0MTG6;Q12770-4;Q12770-2;Q12770	A0A0A0MTG6	SCAP	Sterol regulatory element-binding protein cleavage-activating protein	1	RDS(0.996)GVGS(0.003)GLEAQES(0.001)WER	113.14	0.00068129	16353000.0	959.36	675.64	956.14	1033.2	876.65	857.33	557.83	1062.0	918.99	1050.8	True	False	917.1876831052285	787.2780260836163	755.4592804262056	942.6209601464856	991.9448408590558	1022.9968888997553	682.9375774285771	1024.648858052669	876.2663554865768	860.4899375398127	1.0658900738892052	0.9149183409796595	0.8779408653936206	1.095446813522875	1.1527675078863557	1.1888539822145494	0.7936613173898729	1.1907737828779215	1.0183342271170186	1.0	9.749014511446024	-7.275076960841042	24.799625501507634	1.0685653986375216	0.9491166151983617	0.15212801799715892	0.1182730035499634	1212.7262824278891	2205311.53672113	0.033270909358735105	0.04965721259762964	5.307903751255756e-08	7.275076960841042	-0.11944878343915999	
RDS(ph)LTGSSDLYKR	ddPTM_K562_Methotrexat_30min_R1	1	RDSLTGSSDLYKR	13	2	Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;E9PR38;Q14671-4;H0YDK8	Q5T1Z4	PUM1	Pumilio homolog 1	1	RDS(1)LTGSSDLYKR	191.01	0.0003043	8760900.0	2174.6	1731.0	4416.0	2440.6	2102.7	2170.2	1803.0	2867.4	2819.4	4098.6	True	False	2079.007187792518	2017.018328030814	3489.1419482106407	2226.6363872759493	2379.2419059765425	2589.560435643508	2207.3686465477394	2766.5519167422076	2688.326709386232	3356.3038237539768	0.6194335486193198	0.60096416592429	1.039578694728562	0.6634191968906704	0.7088875235721047	0.7715512574624792	0.6576784351062801	0.8242853037207638	0.8009783531394895	1.0	11.712657603891328	-15.999999999999998	0.18683274790655782	2.1033530061504075	0.6954063251530195	0.32146831512253493	0.11891934903025171	173.61405250789468	1.690014467891497	70.8826873183352	0.34431922680617527	1.000000000000004e-16	15.999999999999998	-1.4079466809973882	
RDS(ph)SDDWEIPDGQITVGQR	ddPTM_K562_Methotrexat_30min_R1	3	RDSSDDWEIPDGQITVGQR	19	1	H7C560;P15056;A0A2R8Y679;A0A2R8Y492;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0	H7C560	BRAF	Serine/threonine-protein kinase B-raf	1	RDS(0.5)S(0.5)DDWEIPDGQITVGQR;RDS(0.791)S(0.209)DDWEIPDGQITVGQR;RDS(0.5)S(0.5)DDWEIPDGQITVGQR	167.88	1.1791e-12	284487000.0	3787.06	3294.57	4728.299999999999	4184.0	3255.87	3457.7499999999995	3081.91	3741.3500000000004	4064.2999999999997	4115.9	True	False	3620.5853768976053	3838.9416943850283	3735.8944460426574	3817.1952160790715	3684.073973658556	4125.911250735572	3773.1067695407337	3609.764599882634	3875.351580108699	3370.4706261135466	1.0742076637150413	1.1389927758580323	1.1084192270058373	1.132540715977293	1.0930443793561917	1.224135056620599	1.119459917647009	1.070997199000964	1.149795387648082	1.0	11.718734336768003	-12.237833434861809	4.297268302934508	0.9999341074670169	1.1241872423534909	0.439522201174551	0.041835776367748524	33887777.18670543	2.530189203442586	22095.029442117084	0.010007698178950213	5.783178073395727e-13	12.237833434861809	0.12425313488647394	
RDS(ph)SESQLASTESDKPTTGR	ddPTM_K562_Methotrexat_30min_R1	3	RDSSESQLASTESDKPTTGR	20	2	K7EQH1;A0A087WVF1;Q96B23-2;Q96B23	K7EQH1	C18orf25	Uncharacterized protein C18orf25	1	RDS(0.79)S(0.078)ES(0.132)QLASTESDKPTTGR;RDS(0.934)S(0.056)ES(0.011)QLASTESDKPTTGR;RDS(0.887)S(0.079)ES(0.035)QLASTESDKPTTGR	147.03	2.9005e-12	185131000.0	2173.37	1619.85	3281.75	2382.14	1941.52	1713.85	1444.45	1541.05	2237.92	2712.4300000000003	True	False	2077.8312571197584	1887.5026797577787	2592.9555227672718	2173.3014847109466	2196.863910824929	2045.0272567632578	1768.4046819222858	1486.8503980245457	2133.87958766746	2221.182643015907	0.9354616846359347	0.8497737390901542	1.1673760962072772	0.9784433943532227	0.9890514486652218	0.9206929755162021	0.7961545564398782	0.6693958296044085	0.9606952379071774	1.0	11.117112312098788	-8.546276552613602	3.7404619293217465	0.8298620092695208	0.9851128401311291	0.20597254774982943	0.1128184228942964	0.30129223258339416	9.186968759821337	0.04450373744034908	0.03507209411742055	2.8426503712358927e-09	8.546276552613602	0.1552508308616083	
RDSFDDRGPS(ph)LNPVLDYDHGSR	ddPTM_K562_Methotrexat_30min_R1	6	RDSFDDRGPSLNPVLDYDHGSR	22	2	D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991	D6REM6	MATR3	Matrin-3	1	RDS(0.389)FDDRGPS(0.611)LNPVLDYDHGSR;RDS(0.219)FDDRGPS(0.781)LNPVLDYDHGSR;RDS(0.175)FDDRGPS(0.825)LNPVLDYDHGSR;RDS(0.339)FDDRGPS(0.661)LNPVLDYDHGSR;RDS(0.034)FDDRGPS(0.966)LNPVLDYDHGSR;RDS(0.044)FDDRGPS(0.956)LNPVLDYDHGSR	95.307	7.7297e-05	8719509000.0	14062.300000000001	11527.6	16980.8	14663.8	12956.100000000002	11487.640000000001	11364.01	13442.99	14824.5	16883.1	True	False	13444.13812972258	13432.339964302722	13416.762136362164	13378.24742101822	14660.054243602368	13707.463847993622	13912.678520829151	12970.192422140728	14135.312230721504	13825.406989416088	0.9724225941424086	0.9715692257440035	0.9704424720829732	0.9676566795653694	1.0603705377227042	0.9914691016682	1.0063124023386707	0.9381418161555706	1.0224156324325686	1.0	13.755034330386996														
RDSFDDRGPSLNPVLDYDHGSR	ddPTM_K562_Methotrexat_30min_R1	2	RDSFDDRGPSLNPVLDYDHGSR	22	2	D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991	D6REM6	MATR3	Matrin-3	0	;	74.325	0.0013052	48683000.0	2376.7	2132.2	2933.6000000000004	2902.0	2439.4	1992.0700000000002	2107.5	2503.3	2692.2	3236.8999999999996	False	True	2272.223113780226	2484.509808796825	2317.877450016019	2647.5861656456646	2760.223857630273	2377.0093341776615	2580.1605227949854	2415.257520116052	2567.0402096224793	2650.6660437976984	0.8572272312828724	0.937315288966838	0.8744509537290175	0.9988380738647781	1.04133218293905	0.8967592653701634	0.9734008283813462	0.9111889163734981	0.9684510108804935	1.0	11.372139201828274	-7.255335594870874	24.986556512167468	0.9663580014000509	0.8944295686731516	0.4087217221042334	0.04401341534755065	560.6923124740041	2295255.5240052454	0.012239726368791769	0.020512505096576022	5.5547485610710504e-08	7.255335594870874	-0.0719284327268993	
RDSGDNS(ph)APSGQEREDHGLETGDPPLPPPPVLPGPGEELPGAR	ddPTM_K562_Methotrexat_30min_R1	1	RDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEELPGAR	43	2	Q8IXQ3	Q8IXQ3	C9orf40	Uncharacterized protein C9orf40	1	RDS(0.166)GDNS(0.551)APS(0.142)GQEREDHGLET(0.142)GDPPLPPPPVLPGPGEELPGAR	59.166000000000004	0.00012496	33771000.0	203.77	447.02	252.84	370.29	296.37	162.8	315.6	211.03	258.3	78.087	True	False	194.81251478730874	520.8824569591769	199.77233926303876	337.8272506123133	335.34784975235056	194.25879592791583	386.38133380502853	203.60795528705734	246.29168937875576	63.94468762149923	3.0465785670960046	8.145828470417735	3.1241428599280874	5.283116755718272	5.244342606493573	3.037919226031263	6.042430547039235	3.18412620126087	3.8516364461204837	1.0	5.998752603165983	-10.906087198331232	0.36027126339249504	0.26182058691438614	5.1858195649951	0.3517193594914231	1.5373975898577847	4.453887884573288	0.8631981987751834	6.298932040085478	1.2498659857673162	1.241403031709067e-11	10.906087198331232	4.923998978080714	
RDSGDNSAPS(ph)GQEREDHGLETGDPPLPPPPVLPGPGEELPGAR	ddPTM_K562_Methotrexat_30min_R1	1	RDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEELPGAR	43	2	Q8IXQ3	Q8IXQ3	C9orf40	Uncharacterized protein C9orf40	1	RDS(0.242)GDNS(0.242)APS(0.274)GQEREDHGLET(0.242)GDPPLPPPPVLPGPGEELPGAR	46.714	0.00096088	33729000.0	278.17	334.68	385.32	394.79	283.39	351.14	356.79	340.6	401.61	352.93	True	False	265.9419798713532	389.9801814126821	304.446597709358	360.17937365101744	320.6607522398308	418.99283539390905	436.80923982349844	328.6209049460824	382.93923875881546	289.01095703837683	0.9201795758769092	1.3493612332521285	1.053408496443031	1.2462481607684874	1.1095107103404778	1.449747233418117	1.5113933544239153	1.1370534470859037	1.3249990335417152	1.0	8.174980379266332	-8.234204936329123	24.68273946202734	1.307376657676173	1.1491745663608885	0.14826309560351747	0.17273512180654976	1152.3453753434599	1044378.4803163405	0.054962462031854474	0.05494853904684255	5.831698512000811e-09	8.234204936329123	-0.1582020913152844	
RDSS(ph)DDWEIPDGQITVGQR	ddPTM_K562_Methotrexat_30min_R1	1	RDSSDDWEIPDGQITVGQR	19	1	H7C560;P15056;A0A2R8Y679;A0A2R8Y492;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0	H7C560	BRAF	Serine/threonine-protein kinase B-raf	1	RDS(0.214)S(0.786)DDWEIPDGQITVGQR	151.45	2.0686999999999998e-13	133130000.0	1117.7	955.17	1482.3	1258.5	909.86	1065.3	1055.0	1131.3	1012.6	1244.4	True	False	1068.5672462961923	1112.9956073860153	1171.185486828043	1148.1692589473018	1029.522537961581	1271.1541480467363	1291.6106057170628	1091.5115377730563	965.5244470186916	1019.027101517457	1.0486151395826115	1.0922139418359214	1.149317309700599	1.126730836930182	1.010299467431725	1.2474193730017886	1.267493871157789	1.071131019133506	0.9474963380079947	1.0	9.992976705846775	-12.376829466512003	8.119398568777669	0.9999990141770201	1.1131399326334666	0.10128768555901668	0.09366412241652622	1.757121819461983e-06	1.3489472684725363e-07	0.09533240701964713	0.02312130337627374	4.199238422211854e-13	12.376829466512003	0.11314091845644647	
RDVQEIFR	ddPTM_K562_Methotrexat_30min_R1	4	RDVQEIFR	8	1	A0A140T9L4;F6UJC5;Q5STU3;A0A0G2JJZ9;A0A140T9X3;F6WLT2;A0A140T973;A0A140TA18;F6TRA5;A0A0A0MT12;F6S4E6;A0A140T996;A0A140T9X9;A0A140T9K1;Q13838;Q13838-2;K7EQN7;O00148-3;O00148-2;O00148	A0A140T9L4	DDX39B;DDX39A	Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A	0	;;;	140.11	3.7327999999999996e-06	35751300.0	7335.8	6448.6	7666.799999999999	8351.599999999999	6852.5	6678.299999999999	6979.099999999999	7952.299999999999	7739.5	8633.0	False	True	7013.327015638901	7514.1215425416	6057.643453021137	7619.428194695492	7753.723860134238	7968.786958509829	8544.340832568674	7672.613101593448	7379.692334289124	7069.48004451961	0.9920569789394569	1.0628959266059015	0.8568725585012625	1.0777918809746427	1.0967884216810353	1.1272097676670547	1.2086236581419314	1.0853150519239951	1.0438804958520247	1.0	12.78738839435328	-7.498360706351302	23.93706706605958	1.1036900624390968	0.9777530276284034	0.3835700671846911	0.0695300849184812	439.6156904921339	429198.41802983324	0.01963902121538824	0.028940831922008314	3.1742365908783245e-08	7.498360706351302	-0.1259370348106934	
RDVYLS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	3	RDVYLSPR	8	1	P38159;P38159-2;H3BUY5;H0Y6E7;H3BT71;Q96E39	P38159;Q96E39	RBMX;RBMXL1	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1	1	RDVYLS(1)PR;RDVYLS(1)PR;RDVYLS(1)PR	115.0	0.006852	70999000.0	7712.9	6762.0	8816.3	7387.400000000001	6886.900000000001	6966.5	7095.8	8549.4	8250.7	8904.4	True	False	7373.850151165692	7879.305565652438	6965.879111868092	6739.758111678422	7792.648063094994	8312.677529679515	8687.213778243726	8248.712756153947	7867.126757867986	7291.72687459984	1.0112625277904912	1.0805815551182234	0.9553126758125277	0.9243020518439661	1.068697195754832	1.1400149337238723	1.191379480833951	1.1312426943592324	1.0789113324132458	1.0	12.832044808183957	-7.9809826070748455	7.19500900633786	1.1199753761321862	0.9960977537231506	0.4468769329407912	0.05991956965174631	0.14431687529417891	33.40722723977863	0.01943585803473499	0.021666906613614284	1.0447620597350122e-08	7.9809826070748455	-0.12387762240903566	
RDYDDMS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	RDYDDMSPR	9	1	Q5T6W2;P61978-3;P61978;P61978-2	Q5T6W2	HNRNPK	Heterogeneous nuclear ribonucleoprotein K	1	RDYDDMS(1)PR;RDYDDMS(1)PR	111.5	0.0093936	81188100.0	8525.099999999999	6833.3	9638.9	8656.4	6983.700000000001	6970.6	6803.299999999999	7577.3	8237.2	9355.9	True	False	8150.346811666514	7962.386678759659	7615.826613362218	7897.506851928024	7902.178959798537	8317.569796653137	8329.113207464354	7310.802064145475	7854.254369921356	7661.455849475387	1.0638117574252683	1.0392785438168226	0.9940443125941536	1.0308102020151693	1.031420021866945	1.0856382859953015	1.0871449723272482	0.9542314421411274	1.025164736863839	1.0	12.903402847471476	-9.263939835483237	24.999351325366018	0.9922735696546253	1.0452936785975147	0.39654654022336955	0.03061992607957637	259.2559000771036	2591982.38860613	0.016979840356797272	0.008711688738871176	5.445780901542498e-10	9.263939835483237	0.05302010894288933	
REDS(ph)RGSLIPEGATGFPDQGNTGENTR	ddPTM_K562_Methotrexat_30min_R1	2	REDSRGSLIPEGATGFPDQGNTGENTR	27	2	A0A0J9YW64;A6NIW2;Q5JSL3	A0A0J9YW64	DOCK11	Dedicator of cytokinesis protein 11	1	REDS(0.804)RGS(0.195)LIPEGAT(0.001)GFPDQGNTGENTR;REDS(0.499)RGS(0.499)LIPEGAT(0.002)GFPDQGNTGENTR	58.919	0.011483	49397500.0	2032.65	1703.74	2672.2	2588.1000000000004	2025.04	1689.61	2076.4	2385.3	2294.33	2565.6000000000004	True	False	1943.2971398263883	1985.254076371589	2111.341737773658	2361.205291284474	2291.368254757567	2016.1032198265718	2542.0855561240837	2301.4076469990905	2187.667099079986	2100.944978827697	0.9249633662042523	0.9449338732703689	1.0049486107683612	1.1238777383889411	1.0906369647224763	0.9596173341728987	1.209972456081424	1.0954154774120974	1.0412776732024078	1.0	11.03682266475404	-6.958680280532834	3.049132980137515	1.0797517310869578	0.9339881010138523	0.4249466163530613	0.06484514889625204	0.22808934478059048	4.320877195573345	0.017803736949768497	0.04121825059658931	1.0998152048403407e-07	6.958680280532834	-0.14576363007310544	
REDSRGS(ph)LIPEGATGFPDQGNTGENTR	ddPTM_K562_Methotrexat_30min_R1	2	REDSRGSLIPEGATGFPDQGNTGENTR	27	2	A0A0J9YW64;A6NIW2;Q5JSL3	A0A0J9YW64	DOCK11	Dedicator of cytokinesis protein 11	1	REDS(0.23)RGS(0.733)LIPEGAT(0.037)GFPDQGNTGENTR;REDS(0.199)RGS(0.801)LIPEGATGFPDQGNTGENTR	80.68	0.0016764	46185000.0	1831.92	1430.06	2239.34	1805.58	1488.7	1316.04	1403.42	1565.95	1726.38	1980.9	True	False	1751.3909902790726	1666.3531081361916	1769.333136391763	1647.2876047437967	1684.4901438280683	1570.3461043794493	1718.1726599767203	1510.87465091109	1646.120970614387	1622.1398146865388	1.0796794298631467	1.0272561545246313	1.090740218797766	1.0155028498959058	1.038437086974268	0.9680707483792955	1.0592013366669868	0.9314084009478865	1.0147836553364435	1.0	10.663682457646262	-7.803037940671841	1.0094403298535175	0.9913733598414116	1.0640687642213755	0.38205783766002	0.03638582181482854	0.5473815650519069	1.1986475809738402	0.01600866683762595	0.023646795414259944	1.5738453647710164e-08	7.803037940671841	0.07269540437996391	
REEDEENDNDNES(ph)DHDEADS	ddPTM_K562_Methotrexat_30min_R1	2	REEDEENDNDNESDHDEADS	20	1	H0YBP8;Q9NRG0	H0YBP8	CHRAC1	Chromatin accessibility complex protein 1	1	REEDEENDNDNES(0.888)DHDEADS(0.112);REEDEENDNDNES(0.972)DHDEADS(0.028)	59.81399999999999	0.021698	7244200.0	1396.8899999999999	1297.91	1805.9699999999998	1848.21	1588.36	1652.17	1374.1999999999998	2057.38	1803.2600000000002	1807.93	True	False	1335.484388188859	1512.367566802123	1426.9215770403025	1686.180298831141	1797.257180661483	1971.428469706541	1682.3993311624529	1985.0207792659141	1719.4268361948707	1480.4963578001095	0.9020517890184303	1.0215273808909409	0.9638129601079096	1.1389290422413874	1.213955827174106	1.3315996755547	1.1363751908598774	1.3407805894338602	1.1613853874992244	1.0	10.531865225977835	-7.390433763110253	2.527953636078025	1.2177778149400982	0.9629947440534341	0.5370473911918805	0.09638433969649159	0.19946158417336102	2.480251260055023	0.027406895752816414	0.04494261034998819	4.0697359909203626e-08	7.390433763110253	-0.2547830708866641	
REEQT(ph)DT(ph)SDGESVTHHIR	ddPTM_K562_Methotrexat_30min_R1	2	REEQTDTSDGESVTHHIR	18	1	A2AB27;P36915	A2AB27	GNL1	Guanine nucleotide-binding protein-like 1	2	REEQT(0.984)DT(0.91)S(0.104)DGES(0.001)VTHHIR;REEQT(0.998)DT(0.989)S(0.013)DGES(0.001)VTHHIR	64.275	0.014036000000000002	60123000.0	1837.48	1338.74	1513.88	1819.81	1425.7800000000002	1385.3600000000001	1569.1100000000001	1662.25	2054.85	2070.6	True	False	1756.7065793364293	1559.944030310788	1196.1372763942777	1660.2700827372978	1613.295060970769	1653.0612133089517	1921.0228602243612	1603.78772532773	1959.3204720090446	1695.5942754757684	1.0360418201126051	0.9199984057937928	0.7054383785641481	0.9791670724244697	0.9514629084944823	0.9749155427203348	1.1329496023955021	0.9458558267883522	1.155536144670739	1.0	10.727575285469065	-8.193010755563591	1.5375468108390127	1.0530242806806958	0.8961362176066405	0.30623201407825473	0.09810810511067863	0.48222020258950743	2.279558532589838	0.04260515795520675	0.040750105504222825	6.411936968416567e-09	8.193010755563591	-0.15688806307405523	
REEQTDTS(ph)DGESVTHHIR	ddPTM_K562_Methotrexat_30min_R1	3	REEQTDTSDGESVTHHIR	18	1	A2AB27;P36915	A2AB27	GNL1	Guanine nucleotide-binding protein-like 1	1	REEQTDT(0.046)S(0.954)DGESVTHHIR;REEQTDT(0.016)S(0.959)DGES(0.024)VTHHIR;REEQT(0.003)DT(0.108)S(0.84)DGES(0.043)VT(0.006)HHIR	117.38	0.00057906	197377800.0	4244.0	3449.13	6265.299999999999	4832.4	4679.7	4748.9	4197.08	4755.3	4742.35	5335.9	True	False	4057.4388416221163	4019.040107314224	4950.299150390431	4408.750994785014	5295.162575449865	5666.557714877638	5138.382029424614	4588.053403670303	4521.879183605661	4369.516804071836	0.9285783814450828	0.9197905140378422	1.132916835513112	1.0089790685040085	1.2118416778979872	1.2968385221901708	1.1759611553928098	1.0500139052892115	1.0348693886225226	1.0	12.093258035117481	-6.76069014521485	24.997693060532566	1.1242105842681425	0.9241843741490242	0.4076747586306455	0.09081063856001638	18.64268080766527	621889.1686634056	0.02544096849361019	0.05976451318344243	1.735041451095666e-07	6.76069014521485	-0.20002621011911825	
REEVRGTS(ph)ALLENPDT(ph)GS(ph)VY(ph)VLRVR	ddPTM_K562_Methotrexat_30min_R1	1	REEVRGTSALLENPDTGSVYVLRVR	25	3	F5GYK0;Q5VT61;A0A0A0MS35;A0A087WUH1;Q7Z4K8-2;Q7Z4K8-5;Q7Z4K8	F5GYK0	TRIM46	Tripartite motif-containing protein 46	4	REEVRGT(0.27)S(0.731)ALLENPDT(1)GS(1)VY(1)VLRVR	51.39	0.03228	14192000.0	826.31	715.26	555.36	602.44	822.23	781.63	613.2	593.03	647.65	753.49	True	False	789.9864017956572	833.4445576587636	438.79752544344734	549.6250205484405	930.3676569891537	932.6689352649679	750.7257094082495	572.1727987673963	617.5408928615993	617.025659532617	1.2803136945618339	1.3507453778989986	0.7111495586355785	0.8907652575822681	1.5078265265238502	1.5115561579261443	1.216684748535267	0.9273079489122126	1.0008350273947644	1.0	9.26918667608737	-9.255579102404814	22.963547552882893	0.9730536044816488	1.20689105485829	0.170313382697989	0.23640000065156846	315.051641393426	1234548.415620473	0.12948981280072475	0.07196244727600183	5.551634904220145e-10	9.255579102404814	0.23383745037664128	
REFQLDLDEIENDNGTVR	ddPTM_K562_Methotrexat_30min_R1	1	REFQLDLDEIENDNGTVR	18	1	Q14008-2;Q14008;Q14008-3;H0YCF6;H0YEK7	Q14008-2	CKAP5	Cytoskeleton-associated protein 5	0		92.307	0.0039021999999999998	0.0	527.25	706.25	905.56	727.61	695.85	573.46	579.08	776.19	529.29	691.36	False	True	504.07272131132447	822.9458083025786	715.495331209608	663.8215609874024	787.3664718094725	684.2730289485415	708.9534308612672	748.8909577513203	504.68342342733854	566.1480045846264	0.8903550259461824	1.45358775733275	1.2637955541935635	1.172523007432372	1.390743172162464	1.2086468969374564	1.2522404479397835	1.3227830031844225	0.8914337228789079	1.0	9.145035447014765	-9.763131784579027	24.999340750337996	0.9457167414732833	1.2535187250457185	0.4032754999555834	0.14495448041048245	40.52913662349754	598587.4723101064	0.10969987929376393	0.03401726207451382	1.725314274202226e-10	9.763131784579027	0.30780198357243516	
REPAEQPGDGERTDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPS(ph)PEAR	ddPTM_K562_Methotrexat_30min_R1	2	REPAEQPGDGERTDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPSPEAR	54	2	Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151	Q15424-2;Q14151	SAFB;SAFB2	Scaffold attachment factor B1;Scaffold attachment factor B2	1	REPAEQPGDGERTDCEPVGLEPAVEQS(0.007)S(0.007)AAS(0.026)ELAEAS(0.026)S(0.026)EELAEAPT(0.201)EAPS(0.708)PEAR;REPAEQPGDGERTDCEPVGLEPAVEQS(0.006)S(0.006)AAS(0.016)ELAEAS(0.045)S(0.045)EELAEAPT(0.084)EAPS(0.798)PEAR	57.455	5.6151e-10	38902000.0	2237.44	1887.56	2682.92	2267.58	2213.18	1984.31	1744.49	2127.87	2356.99	2380.51	True	False	2139.0848166350106	2199.4472069658254	2119.8117562711277	2068.784782045071	2504.251962462149	2367.749824003209	2135.736289637306	2053.031606011802	2247.414049356693	1949.376571386467	1.0973173926644744	1.1282823643466173	1.0874306110919558	1.0612545633364603	1.2846424847924762	1.2146190011502909	1.0955996501580467	1.053173427929121	1.1528886118489927	1.0	10.928797095214025	-12.038954450055543	5.009561491177189	0.9999979931019263	1.1309007771993338	0.2489574140853087	0.06803776832948259	1.6459534714528076e-06	3.1554707999047754e-07	0.07109978506097951	0.017243966665258563	9.142091210927844e-13	12.038954450055543	0.13090278409740752	
REQGGSGLGSGSS(ph)GGGGSTSGLGSGYIGR	ddPTM_K562_Methotrexat_30min_R1	1	REQGGSGLGSGSSGGGGSTSGLGSGYIGR	29	1	E9PG46;Q2M2I8-2;Q2M2I8	E9PG46	AAK1	AP2-associated protein kinase 1	1	REQGGSGLGS(0.005)GS(0.438)S(0.551)GGGGS(0.004)T(0.001)S(0.001)GLGSGYIGR	74.369	7.7485e-05	11009000.0	742.37	563.16	839.52	969.94	628.38	770.93	825.07	825.61	575.47	804.23	True	False	709.7363036887394	656.2126179167146	663.3162247196102	884.906866128999	711.0229842000952	919.9013116996811	1010.1129501980821	796.5728283397974	548.7165253069788	658.5761538519638	1.0776829673190316	0.9964111425513587	1.0071974529292052	1.3436667285221966	1.0796366981120917	1.3968032494332592	1.5337830625813056	1.2095379155177441	0.8331861427073786	1.0	9.36320646462577	-7.241293976352984	23.897202355216056	1.2254000973790558	1.0240285277118009	0.13539720635834385	0.19197043567969643	844.4377076343002	1001699.3504641787	0.05404541094179992	0.09342711570954855	5.737279710780748e-08	7.241293976352984	-0.2013715696672549	
RETS(ph)CAAR	ddPTM_K562_Methotrexat_30min_R1	1	RETSCAAR	8	1	A0A2R8YFR7;A0A2R8YF49;Q12774	A0A2R8YFR7	ARHGEF5	Rho guanine nucleotide exchange factor 5	1	RET(0.136)S(0.864)CAAR	56.632	0.026701	1753600.0	2861.9	2786.4	3441.7	2828.8	2390.8	3892.4	2409.7	2614.5	2633.9	2506.1	True	False	2736.094302742302	3246.80523929813	2719.3342036133527	2580.8034959953343	2705.232105772919	4644.551211731077	2950.1365654942233	2522.546553087293	2511.4505638974238	2052.221005394485	1.3332356971058097	1.5820933665348669	1.3250688870571388	1.2575660658434997	1.3181972597794895	2.2631827661457375	1.4375335588805835	1.2291788001665056	1.2237719803548468	1.0	11.002970389007523	-9.290664916605467	3.7723626940052153	1.1540585767204607	1.5131186628481015	0.2563710959686638	0.2776742512616945	0.36916190591383224	11.513554422006218	0.1714344601482098	0.08029760295282609	5.120767801106299e-10	9.290664916605467	0.35906008612764073	
RFDDAVVQSDMK	ddPTM_K562_Methotrexat_30min_R1	1	RFDDAVVQSDMK	12	1	E9PKE3;P11142-2;P11142;E9PN89;E9PNE6;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PN25;E9PPY6	E9PKE3	HSPA8	Heat shock cognate 71 kDa protein	0		122.46	0.00095328	10036000.0	4925.1	2814.1	5271.4	4439.3	3445.9	3282.5	3158.3	4651.3	4761.9	5408.6	False	True	4708.598501148229	3279.082193478634	4165.0051779432915	4050.11346145789	3899.096249490923	3916.7966685097294	3866.629171598292	4487.711142618061	4540.520308372808	4429.050129594434	1.0631170032792998	0.7403578865744059	0.9403833905859807	0.9144429037719555	0.8803459286761248	0.884342365496863	0.8730154454025918	1.0132446035396303	1.025167965030141	1.0	12.112781610923024	-9.268440490263552	23.268205393304555	1.0144047524594821	0.8941495080417089	0.3243393054804915	0.07470564280572083	232.6968586250904	773355.4030051198	0.03685684555513516	0.018360327122768427	5.389636924776585e-10	9.268440490263552	-0.12025524441777324	
RFDYDWER	ddPTM_K562_Methotrexat_30min_R1	1	RFDYDWER	8	1	O00507-2;Q93008;O00507;Q93008-3	O00507-2	USP9Y;USP9X	Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X	0		89.88600000000001	0.026601999999999997	6165300.0	652.61	547.02	846.05	817.3	823.11	617.6	799.24	814.45	991.14	992.51	False	True	623.9220458131498	637.4057572498073	668.4756669573399	745.6485779401112	931.3633924137309	736.9424592449681	978.4899151784884	785.8053318653458	945.0621177346495	812.7568213814612	0.7676614079382998	0.7842515011641419	0.8224793066899353	0.9174313377926688	1.1459311911165155	0.9067195006648732	1.2039147373938086	0.9668394176374855	1.1627858331946153	1.0	9.666679949127031	-7.451804852734301	2.5231426339379146	1.0620963767788711	0.7858697694245854	0.6573206087431143	0.08832761137706614	0.16440610304814582	2.058887924108019	0.02503652720368113	0.03923886447679991	3.5334190590316145e-08	7.451804852734301	-0.2762266073542857	
RFPEAEALS(ph)PEQAAHYLR	ddPTM_K562_Methotrexat_30min_R1	3	RFPEAEALSPEQAAHYLR	18	1	Q2NKX8	Q2NKX8	ERCC6L	DNA excision repair protein ERCC-6-like	1	RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR	124.19	5.2516e-05	217524000.0	4222.58	3899.12	4647.19	4729.83	4228.65	3710.76	4128.86	4570.65	4399.1	4986.289999999999	True	False	4036.9604391745283	4543.383306292033	3671.8083266089243	4315.173147434814	4784.791594477437	4427.8118524414795	5054.861957839763	4409.897648830918	4194.586801184996	4083.224562862004	0.9886697087129961	1.1126949390967358	0.8992423194171053	1.0568052481566759	1.1718169110747345	1.0843909719572093	1.2379583537518497	1.08000370318598	1.027273111387471	1.0	11.995493197515001	-7.523862786046429	24.979662181728155	1.1106956625012367	1.0058802825568562	0.23259618199400567	0.0799097080085116	44.07952824417097	1118919.205485398	0.023094211267019944	0.030082979942545097	2.9932101824202e-08	7.523862786046429	-0.1048153799443805	
RFPGYDSESK	ddPTM_K562_Methotrexat_30min_R1	1	RFPGYDSESK	10	1	A0A2R8Y6J3;P46777	A0A2R8Y6J3	RPL5	60S ribosomal protein L5	0		99.75200000000001	0.0088395	13358000.0	3340.4	2331.0	4476.0	3311.3	2557.0	2294.8	2358.7	2900.4	2734.3	3795.2	False	True	3193.5600156820237	2716.1581297745993	3536.5487681591553	3021.0034701249097	2893.2903189147382	2738.237622207503	2887.6985172557697	2798.3912880376297	2607.1829898115825	3107.8525037600875	1.027577728292524	0.8739662279623662	1.1379397072030937	0.9720549692978988	0.9309612716222029	0.8810706489109764	0.9291620222523557	0.9004260287938212	0.8389017775641664	1.0	11.601702320858397	-7.746320286666884	3.377257142375444	0.9058175481447223	1.0061390721124865	0.28381716990562145	0.07103135319832986	0.30151340143923244	7.188235322168803	0.02179666493126911	0.02727611603337849	1.793410521514162e-08	7.746320286666884	0.10032152396776428	
RFS(ph)DS(ph)EGEETVPEPR	ddPTM_K562_Methotrexat_30min_R1	1	RFSDSEGEETVPEPR	15	1	A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286	A0A1B0GWH8	CLN3	Battenin	2	RFS(1)DS(0.971)EGEET(0.03)VPEPR	130.87	0.00060732	15340000.0	2929.3	2853.2	3756.7	3655.3	2485.2	2885.7	2785.0	3220.2	3453.5	4010.0	True	False	2800.531479444782	3324.642803892272	2968.2200083430544	3334.845524219366	2812.0473604094286	3443.3206843316134	3409.6071440019127	3106.9437407732653	3292.947538790295	3283.7501423055305	0.8528454839985239	1.01245303686779	0.9039116497027567	1.0155600699503773	0.8563524137177752	1.0485939962271453	1.038327216213843	0.9461571697388252	1.0028008819447836	1.0	11.681128642542038	-8.282318090715847	24.935887083489117	1.00575763260023	0.9364051387356256	0.3159980947291562	0.05743266852442891	1095.5903245725842	1308482.0902255191	0.01931491322750118	0.017052812274072016	5.220137099539239e-09	8.282318090715847	-0.0693524938646044	
RFS(ph)FCCSPEPEAEAEAAAGPGPCER	ddPTM_K562_Methotrexat_30min_R1	3	RFSFCCSPEPEAEAEAAAGPGPCER	25	1	Q13501;E7EMC7;D6RBF1;C9J6J8;E3W990	Q13501	SQSTM1	Sequestosome-1	1	RFS(0.885)FCCS(0.115)PEPEAEAEAAAGPGPCER;RFS(0.811)FCCS(0.189)PEPEAEAEAAAGPGPCER;RFS(0.856)FCCS(0.144)PEPEAEAEAAAGPGPCER	139.64	7.1519e-17	79215000.0	1364.68	1195.6100000000001	1302.5900000000001	1410.44	1088.9299999999998	1088.72	1276.82	1308.29	1201.44	1520.12	True	False	1304.6903012216933	1393.164230604808	1029.1941599455847	1286.7889150493697	1232.1433816878475	1299.0997315887016	1563.1793872906733	1262.2766991541694	1145.5853166365162	1244.8115377360305	1.0481026739152546	1.1191768298826907	0.8267871310201749	1.0337218735855265	0.9898232337473166	1.0436115766981133	1.2557558633603816	1.0140303659539525	0.9202881576114088	1.0	10.281711622011919	-8.385630615809992	5.908939606480065	1.0619184594400297	1.0021786196586957	0.03228734591879767	0.10563436524795124	0.7684812514552856	33.92860016066125	0.03916595446631026	0.03436503868149825	4.114995685419867e-09	8.385630615809992	-0.059739839781334014	
RFS(ph)FSQR	ddPTM_K562_Methotrexat_30min_R1	1	RFSFSQR	7	1	A0A0D9SFK2;Q92614-3;Q92614-4;Q92614	A0A0D9SFK2	MYO18A	Unconventional myosin-XVIIIa	1	RFS(0.998)FS(0.002)QR	82.029	0.021053	44390000.0	1749.4	1654.2	1532.6	1580.6	1739.3	1603.6	1270.2	1760.4	1870.2	1897.4	True	False	1672.4984706724151	1927.5284334076096	1210.9282042182128	1442.0312520398136	1968.0484363271023	1913.4730046069162	1555.0746837742302	1698.4857341957813	1783.254810205765	1553.7624738180828	1.0764183707967672	1.2405554039872428	0.7793522012683068	0.928089895552883	1.2666340380141816	1.2315093438348472	1.0008445370371977	1.0931437480415318	1.1477010419898657	1.0	10.601550258139849														
RFS(ph)GLLNCS(ph)PAAPPT(ph)APPACEAK	ddPTM_K562_Methotrexat_30min_R1	1	RFSGLLNCSPAAPPTAPPACEAK	23	1	Q9BTL4	Q9BTL4	IER2	Immediate early response gene 2 protein	3	RFS(1)GLLNCS(1)PAAPPT(1)APPACEAK	45.137	0.027315	0.0	138.72	0.0	166.95	0.0	170.76	167.18	0.0	0.0	0.0	0.0	True	False	132.62203489863796	0.0	131.90947650674065	0.0	193.21793306917507	199.48516893875282	0.0	0.0	0.0	0.0											0.0														
RFS(ph)GTAVYENPQR	ddPTM_K562_Methotrexat_30min_R1	3	RFSGTAVYENPQR	13	1	Q6AHZ1-2;Q6AHZ1	Q6AHZ1-2	ZNF518A	Zinc finger protein 518A	1	RFS(0.907)GT(0.093)AVYENPQR;RFS(0.927)GT(0.073)AVYENPQR;RFS(0.963)GT(0.037)AVYENPQR	142.95	2.4433e-06	79263000.0	6690.41	5996.29	8377.0	7740.8	5969.67	6176.96	5769.849999999999	6825.5	6700.299999999999	8146.4	True	False	6396.307587270736	6987.075002997054	6618.78217847839	7062.17608236732	6754.786240952577	7370.570098863012	7063.8857378166795	6585.443296269768	6388.804515464485	6671.008019770017	0.9588217505232812	1.0473791940124115	0.9921712219297515	1.058637024785167	1.0125585550091196	1.1048660227989222	1.0588933062113464	0.987173644036003	0.957697022178777	1.0	12.703689060351518	-9.385235477345637	5.773351392192458	0.9770906024873911	1.0350776639824464	0.26927838502554136	0.039024931713812994	0.29943972301568356	12.769266318063835	0.02220987406222625	0.010377816978769447	4.1187413765692084e-10	9.385235477345637	0.05798706149505528	
RFS(ph)SSDFSDLSNGEELQETCSSSLR	ddPTM_K562_Methotrexat_30min_R1	1	RFSSSDFSDLSNGEELQETCSSSLR	25	1	P23497-2;P23497-3;P23497;P23497-4;E9PHV6;P23497-7;P23497-6;H7C1G8;H7C4B4	P23497-2	SP100	Nuclear autoantigen Sp-100	1	RFS(0.594)S(0.164)S(0.164)DFS(0.047)DLS(0.031)NGEELQETCSSSLR	57.078	0.006210800000000001	11820000.0	471.21	395.34	507.63	455.31	421.04	334.3	374.05	485.0	288.32	397.6	True	False	450.496172610923	460.6632153689789	401.08540017440407	415.39367921437895	476.4141399592729	398.89874372667236	457.9402341881204	467.9422750993832	274.9160661311764	325.59078717722645	1.3836269033180835	1.414853348163778	1.2318696227608068	1.2758152121431825	1.463229792493944	1.2251536574022985	1.406490147213082	1.4372098152908475	0.8443607035525037	1.0	8.346916067874679	-9.762113313295071	24.999992896333808	0.9221801964827329	1.3510719268976883	0.7974242740214084	0.08719995349021577	7.336687059732908	272062.27888763475	0.06862906229922659	0.021756528284024194	1.7293650856416683e-10	9.762113313295071	0.42889173041495543	
RFSFCCS(ph)PEPEAEAEAAAGPGPCER	ddPTM_K562_Methotrexat_30min_R1	1	RFSFCCSPEPEAEAEAAAGPGPCER	25	1	Q13501;E7EMC7;D6RBF1;C9J6J8;E3W990	Q13501	SQSTM1	Sequestosome-1	1	RFS(0.159)FCCS(0.841)PEPEAEAEAAAGPGPCER	79.236	0.00059115	29355000.0	174.26	279.8	432.89	417.8	148.49	246.17	411.37	330.35	470.54	483.22	True	False	166.5997390530324	326.03219421318414	342.0323047918716	381.17212267634693	168.0190377221937	293.73886851090293	503.63019419320216	318.7314032558374	448.6646981040638	395.7041755024632	0.4210209276702347	0.8239291228079412	0.8643636483177379	0.96327546251524	0.4246076946467496	0.7423193554576845	1.2727441997641167	0.8054789991819364	1.1338386751525975	1.0	8.62827847860041	-8.643266573695556	9.173354264942137	1.036188297898477	0.7157738755153897	0.42593983493292376	0.19667550477220935	0.29689087345249354	22.49108468312028	0.07527076850440924	0.05821991198319461	2.273701384859587e-09	8.643266573695556	-0.32041442238308737	
RFSGT(ph)AVYENPQR	ddPTM_K562_Methotrexat_30min_R1	1	RFSGTAVYENPQR	13	1	Q6AHZ1-2;Q6AHZ1	Q6AHZ1-2	ZNF518A	Zinc finger protein 518A	1	RFS(0.009)GT(0.991)AVYENPQR	130.47	0.0019173999999999999	19030000.0	735.87	640.72	921.23	706.19	457.78	464.41	660.7	753.89	822.05	933.05	True	False	703.5220359058585	746.5880896221283	727.8764123528283	644.279419130707	517.9860939353882	554.1506598088658	808.8787935519081	727.3752613910801	783.8330749276274	764.0656035606422	0.9207612967098073	0.9771256370433815	0.9526360157568046	0.8432252625013918	0.6779340563447793	0.7252658112424558	1.0586509715689736	0.951980115321799	1.0258714320797406	1.0	9.577552704826694	-8.779479338368857	24.999742891025555	1.0051239891428714	0.8518983923524559	0.42358046963845464	0.09115527481188261	301.61189005654114	417969.1852108082	0.04443233010730581	0.030023748367841246	1.6615777257188608e-09	8.779479338368857	-0.15322559679041547	
RFSS(ph)SDFSDLSNGEELQETCSSSLR	ddPTM_K562_Methotrexat_30min_R1	1	RFSSSDFSDLSNGEELQETCSSSLR	25	1	P23497-2;P23497-3;P23497;P23497-4;E9PHV6;P23497-7;P23497-6;H7C1G8;H7C4B4	P23497-2	SP100	Nuclear autoantigen Sp-100	1	RFS(0.031)S(0.471)S(0.471)DFS(0.027)DLSNGEELQETCSSSLR	107.58	1.0922000000000001e-07	13936000.0	654.29	401.26	901.72	884.45	626.19	767.07	796.34	948.17	720.15	931.95	True	False	625.5281950247254	467.5613947461843	712.4612947329035	806.9116416972113	708.5449608139306	915.2954213294008	974.9395163570857	914.8223236721284	686.6703836860667	763.1648242198602	0.819650192426213	0.6126610922144448	0.9335614956588336	1.0573228955122125	0.9284297943609177	1.199341731014732	1.2774953527944775	1.1987218155754218	0.899766815625983	1.0	9.575850865975218	-7.1311226147320586	1.4062111489007156	1.1136880757291152	0.70332440946506	0.5449769298263331	0.12818726597415486	0.3335835788185775	1.2420159510107864	0.042988279682289084	0.12171369524570064	7.393964911436027e-08	7.1311226147320586	-0.4103636662640552	
RFVEVGR	ddPTM_K562_Methotrexat_30min_R1	1	RFVEVGR	7	1	E7EPB3;P50914	E7EPB3	RPL14	60S ribosomal protein L14	0		82.241	0.019025999999999998	0.0	2291.8	2225.6	2682.0	2471.1	2303.5	2266.6	2598.6	2544.1	2673.8	2453.9	False	True	2191.0552161238356	2593.3425712682747	2119.084851698584	2254.4624996302546	2606.450625584709	2704.5883713158096	3181.4021990676397	2454.6225609903913	2549.495621606338	2009.4749312228269	1.0903620553208453	1.2905573147360174	1.0545465478432499	1.1219162103497082	1.2970804388182162	1.3459179456744876	1.5832007404698796	1.2215243508893532	1.2687372118919105	1.0	10.972602864135828	-7.802286300778537	6.265370286374531	1.3161146638593442	1.1440166787306305	0.1762238931693395	0.14711400936003047	0.28087802427205544	28.225122664374336	0.04525875394654854	0.052357351989584806	1.5765716007461602e-08	7.802286300778537	-0.17209798512871366	
RGAAAADLLSSSPES(ph)QHGGTQSPGGGQPLLQPTK	ddPTM_K562_Methotrexat_30min_R1	1	RGAAAADLLSSSPESQHGGTQSPGGGQPLLQPTK	34	1	Q9H3S7	Q9H3S7	PTPN23	Tyrosine-protein phosphatase non-receptor type 23	1	RGAAAADLLS(0.042)S(0.139)S(0.139)PES(0.595)QHGGT(0.042)QS(0.042)PGGGQPLLQPTK	70.028	3.9338e-05	15011000.0	1783.3	1379.4	3043.0	2211.2	1903.6	1754.9	1330.3	1950.1	2456.1	2726.8	True	False	1704.9082672631291	1607.3224042089582	2404.3158850554764	2017.347529109475	2153.9567661658566	2094.009588291766	1628.6536386591554	1881.5138776727972	2341.9164470892824	2232.9500967677595	0.7635227807961398	0.7198201189249996	1.0767441191524039	0.9034449681744462	0.9646237814645982	0.9377771546811042	0.7293730572020685	0.8426134916298965	1.0487992770099313	1.0	11.124735294017652	-6.7304367790661646	24.999445311423536	0.9245700471293501	0.741671156321259	0.3947967213200152	0.09606159009861859	220.8813107641537	178108.2711995491	0.02528524837665589	0.06688353553451222	1.8602153379990898e-07	6.7304367790661646	-0.18289889080809107	
RGAAGDWGER	ddPTM_K562_Methotrexat_30min_R1	3	RGAAGDWGER	10	1	A0A0A0MRM9;Q14978;Q14978-3;Q14978-2	A0A0A0MRM9	NOLC1	Nucleolar and coiled-body phosphoprotein 1	0	;;	125.74	0.0030683000000000004	3580000.0	2417.5299999999997	2228.76	2311.83	2499.56	2581.48	2408.76	2175.58	2353.6	2827.93	3098.7799999999997	False	True	2311.258275868688	2597.024707557459	1826.6084760262252	2280.427455617257	2920.9898679984426	2874.218779357041	2663.5091958160447	2270.82255396682	2696.4601515480626	2537.5609142078633	0.9108188350978684	1.0234334446974873	0.71982842492529	0.8986690498143669	1.151101379140793	1.1326698654854834	1.0496335992972599	0.8948839577613412	1.0626188858957113	1.0	11.309226739303076	-7.657800343756979	8.404558628713717	1.0472561350945195	0.8841577613978157	0.40440723662171785	0.09536274100979851	0.27868457060885327	20.414678081370976	0.029926591111939203	0.03863831224353001	2.1988705172810985e-08	7.657800343756979	-0.16309837369670388	
RGAEEEEEEEDDDS(ph)GEEMK	ddPTM_K562_Methotrexat_30min_R1	2	RGAEEEEEEEDDDSGEEMK	19	1	Q08495-3;Q08495-2;Q08495;Q08495-4;E5RFK4	Q08495-3	DMTN	Dematin	1	RGAEEEEEEEDDDS(1)GEEMK;RGAEEEEEEEDDDS(1)GEEMK	87.287	0.0013525	34773000.0	4908.2	3561.3	7656.1	4861.9	3810.6000000000004	3721.8	3207.9	4178.0	5140.4	6566.5	True	False	4692.441404912739	4149.7442932502245	6049.189236796987	4435.664775586719	4311.76069192667	4440.985176194821	3927.3532341988284	4031.0573718870555	4901.423925987441	5377.24321931403	0.8726481606891773	0.7717233764589885	1.1249610609149043	0.8248956936994515	0.801853387706111	0.8258851227416404	0.7303655561073611	0.7496513003927864	0.9115124099989494	1.0	12.392651012619611	-7.478085969041172	24.999928201702517	0.8177476694865983	0.9191314843421418	0.10578134349209767	0.10993407040243267	844.2044903926351	471170.6605325252	0.030369889056198435	0.04504306260407292	3.325937095090429e-08	7.478085969041172	0.10138381485554349	
RGAPS(ph)SPATGVLPSPQGK	ddPTM_K562_Methotrexat_30min_R1	1	RGAPSSPATGVLPSPQGK	18	1	Q5SRE5-2;Q5SRE5	Q5SRE5-2	NUP188	Nucleoporin NUP188 homolog	1	RGAPS(0.497)S(0.497)PAT(0.007)GVLPSPQGK	99.11	0.00083068	15676000.0	3166.9	2308.1	4253.5	3846.6	2701.5	2177.5	2226.8	3108.4	3364.7	4051.2	True	False	3027.6868679389913	2689.474294008044	3360.748477516752	3509.374550231777	3056.7946017004956	2598.2710573282343	2726.216584654746	2999.0758101421097	3208.27583140805	3317.488423069365	0.9126442904472151	0.8106959093830756	1.0130400016309211	1.0578407827524166	0.9214183176779036	0.7832042575522523	0.821771242876691	0.9040199776695355	0.967079736917282	1.0	11.695875715740733	-5.477417645527339	18.29012318707383	0.9135342146548825	0.9248548680012604	0.0	0.08786624591822388	0.0	0.0	0.021792452784247497	0.0	3.3310592259028363e-06	5.477417645527339	0.011320653346377885	
RGAYGGGYGGYDDYNGYNDGYGFGSDR	ddPTM_K562_Methotrexat_30min_R1	1	RGAYGGGYGGYDDYNGYNDGYGFGSDR	27	1	P31943;E9PCY7;G8JLB6;H0YB39;H0YBD7	P31943	HNRNPH1	Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed	0		75.404	0.00039762	22306000.0	846.0	820.01	725.8	824.62	1129.1	907.79	835.86	1015.3	953.88	1018.8	False	True	808.8108529717975	955.5027147131998	573.4644986438595	752.3268449051438	1277.5964407847598	1083.2075697506311	1023.3228823646108	979.5913235224814	909.5343270019649	834.2854476261532	0.969465373360113	1.1452947158936477	0.687372050268377	0.901761917393847	1.5313660862957497	1.2983656527064595	1.2265860387189278	1.1741680575992024	1.0901956034231717	1.0	9.704397270586588	-7.711529163194818	24.999963094584373	1.2330589472610696	0.9245956347212257	0.425483593731634	0.16703491429457076	106.0031053517508	53096.22249955215	0.05062311983699962	0.06535406387364102	1.9429912141543554e-08	7.711529163194818	-0.3084633125398438	
RGCCLVLGY(ph)MAK	ddPTM_K562_Methotrexat_30min_R1	1	RGCCLVLGYMAK	12	1	E9PRX9;Q8IZU9-2;Q8IZU9	E9PRX9	KIRREL3	Kin of IRRE-like protein 3	1	RGCCLVLGY(1)MAK	85.963	0.011757	40740000.0	3545.4	3697.2	3717.0	3652.2	3869.8	3407.8	3567.4	3738.8	3323.0	3095.9	True	False	3389.5484611420957	4308.099458345193	2936.852495810454	3332.0172964063067	4378.746529580073	4066.3091201667785	4367.480260507157	3607.3042848279874	3168.5144553062546	2535.202510115634	1.3369931781061126	1.6993117674645621	1.158429152737191	1.3143002514045037	1.7271782084896847	1.6039385823980226	1.7227342758933883	1.4228860497079001	1.2498072413007095	1.0	11.307885277914556	-9.946311333357517	2.305496137342868	1.006044998557064	1.5095265079454734	0.43575532689761787	0.18239235719390157	0.2731420442210374	3.237490584256947	0.18287386520005403	0.050532660025503884	1.131588868537724e-10	9.946311333357517	0.5034815093884093	
RGDDSFGDKYRDR	ddPTM_K562_Methotrexat_30min_R1	2	RGDDSFGDKYRDR	13	3	E7EX17;P23588-2;P23588	E7EX17	EIF4B	Eukaryotic translation initiation factor 4B	0	;	77.279	0.028349	44916000.0	3677.9	2750.1	4341.9	4269.3	2678.5	2672.3	3011.6000000000004	3146.4	3108.2	4957.8	False	True	3516.2239197931117	3204.50728129263	3430.594525574226	3895.017097515862	3030.7696985581256	3188.6841545342095	3687.0279622535613	3035.7393286035017	2963.7004604221765	4059.89437793575	0.8660875363907701	0.7893080417825942	0.8449960038907487	0.9593887758962538	0.7465144204315773	0.7854106185283306	0.9081585920785032	0.7477384990855405	0.729994473878177	1.0	11.987226479459128														
RGDIVFVDR	ddPTM_K562_Methotrexat_30min_R1	2	RGDIVFVDR	9	1	O15269	O15269	SPTLC1	Serine palmitoyltransferase 1	0	;	136.02	0.00017779	11556000.0	5722.1	4894.4	6945.299999999999	6125.6	5657.6	5605.7	5290.5	6490.5	6194.0	6563.2	False	True	5470.563335449082	5703.116409424619	5487.576443140255	5588.578158607543	6401.673566011743	6688.922188778367	6477.029298147983	6262.225436149578	5906.042291955138	5374.540881291687	1.017866168716223	1.0611355528574868	1.02103166844298	1.0398242904916588	1.1911107771633884	1.244556946633698	1.2051316458851329	1.1651647228041087	1.0988924305169139	1.0	12.391925802792246	-7.753526628754786	24.44997587195896	1.166471145989644	1.0358385415038185	0.42442466758811126	0.06455884775518735	116.17107190534917	358959.56474844494	0.018928389206162355	0.023969647209591688	1.7638976078250004e-08	7.753526628754786	-0.13063260448582548	
RGDLPFVVPR	ddPTM_K562_Methotrexat_30min_R1	2	RGDLPFVVPR	10	1	P35579;P35579-2	P35579	MYH9	Myosin-9	0	;	138.76	1.4798e-17	6540700.0	5175.9	4579.2	5860.1	5187.5	4586.3	4216.3	4562.9	5142.6	4977.0	5176.6	False	True	4948.373633447665	5335.834966908554	4630.145093004797	4732.719929113333	5189.478838341285	5031.040302646628	5586.24647661269	4961.731843146571	4745.620356322368	4239.0675777204015	1.1673259608917816	1.2587284512642634	1.0922555510414158	1.1164530506631833	1.224202903868774	1.1868271053494546	1.3178007602362278	1.1704771750335694	1.1194962734881357	1.0	12.049531250173988	-10.05370605751546	2.425715468523415	1.0009636020073371	1.1934460699811358	0.48085997767609423	0.06159983103450214	0.30431844388908663	4.1380485579760125	0.06200771988860549	0.01690887352985881	8.836777955663844e-11	10.05370605751546	0.19248246797379864	
RGDS(ph)ES(ph)EEDEQDSEEVR	ddPTM_K562_Methotrexat_30min_R1	2	RGDSESEEDEQDSEEVR	17	1	Q9NZ63	Q9NZ63	C9orf78	Uncharacterized protein C9orf78	2	RGDS(1)ES(1)EEDEQDSEEVR;RGDS(1)ES(0.999)EEDEQDS(0.001)EEVR	115.38	0.0010475	18556200.0	3375.3	3043.1	4531.5	3598.5	3184.7999999999997	3087.3	3163.75	3914.6	4151.0	4732.8	True	False	3226.9258534701057	3545.920551144177	3580.4000766115346	3283.025092031676	3603.6570229486338	3683.8770311317858	3873.301472831618	3776.921299183599	3958.0209160325776	3875.644058230329	0.8326166709291574	0.914924203014477	0.9238206664020621	0.8470914879450383	0.9298214616215587	0.9505199589494535	0.9993955622953207	0.9745273927214544	1.0212550111838348	1.0	11.920220363411461	-8.342462802954588	1.5203952892136925	0.9989009842041067	0.8849442986898388	0.7635102307372275	0.029253701685006326	0.19756777123736646	0.9127376470190054	0.013405462761498062	0.011406146273577613	4.545034634742762e-09	8.342462802954588	-0.11395668551426785	
RGDSES(ph)EEDEQDSEEVR	ddPTM_K562_Methotrexat_30min_R1	2	RGDSESEEDEQDSEEVR	17	1	Q9NZ63	Q9NZ63	C9orf78	Uncharacterized protein C9orf78	1	RGDS(0.019)ES(0.981)EEDEQDSEEVR;RGDS(0.01)ES(0.99)EEDEQDSEEVR	138.05	1.0897e-06	9217000.0	1807.42	1437.8600000000001	1876.05	1814.4	1409.05	1617.81	1296.45	1766.48	1637.51	2225.2200000000003	True	False	1727.9679809436016	1675.4419255588614	1482.2927427401671	1655.3343690377303	1594.364772728514	1930.4288859959547	1587.2119144852	1704.351897149604	1561.3825175168658	1822.2110951773338	0.9482809019859685	0.9194554516724698	0.8134583016551732	0.9084207496149816	0.874961620499492	1.0593881746769243	0.8710362474940017	0.9353207768629791	0.8568614918706305	1.0	10.831474383387482														
RGEAHLAVNDFELAR	ddPTM_K562_Methotrexat_30min_R1	2	RGEAHLAVNDFELAR	15	1	Q02790	Q02790	FKBP4	Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed	0	;	116.79	0.00034086	19140400.0	1862.28	1373.3200000000002	1637.21	1720.89	1683.46	1429.72	1373.21	1879.63	1932.31	1989.97	False	True	1780.4164010311106	1600.2377875512882	1293.5819947984476	1570.0222455540902	1904.8644975675415	1705.9931554917682	1681.1872984613526	1813.5223475155738	1842.4773298624223	1629.5671497964418	1.092570135114415	0.9820017467529232	0.793819386307607	0.96345968053554	1.1689389405066792	1.046899574347012	1.031677214818278	1.1128859266352484	1.1306544379546288	1.0	10.670273087295355	-7.6380667951524845	7.915072666364276	1.0829328893642698	0.9457295694071387	0.35139840507460807	0.08207902835931244	0.26027862445382477	16.97854391431939	0.025112562536764627	0.03243550991001332	2.3010878793720893e-08	7.6380667951524845	-0.1372033199571311	
RGEEGHDPKEPEQLR	ddPTM_K562_Methotrexat_30min_R1	2	RGEEGHDPKEPEQLR	15	2	P51991	P51991	HNRNPA3	Heterogeneous nuclear ribonucleoprotein A3	0	;	74.133	0.013922	11453200.0	4759.3	3537.8	6936.3	5758.2	3529.9	3434.3	3386.1	4174.4	4624.700000000001	6267.0	False	True	4550.086870624911	4122.361317681925	5480.465420147982	5253.3875461822445	3994.143721836972	4097.929870118188	4145.519120396726	4027.5839859275566	4409.698706426371	5131.985571528366	0.886613340432647	0.8032682984442292	1.0679035129313184	1.0236559462145416	0.7782842851304956	0.7985076756359188	0.807780743460302	0.7848003330859121	0.8592578145369008	1.0	12.32530139898802	-7.771591314842054	24.99651459362746	0.8238490624536275	0.9439639429608925	0.24435948350467473	0.09032191475676322	274.3451065656882	675501.7825479201	0.028645882077366867	0.032846769900357856	1.6920324399627504e-08	7.771591314842054	0.12011488050726493	
RGEGDAPFSEPGTT(ph)STQRPSSPETATK	ddPTM_K562_Methotrexat_30min_R1	2	RGEGDAPFSEPGTTSTQRPSSPETATK	27	2	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	RGEGDAPFS(0.001)EPGT(0.023)T(0.317)S(0.317)T(0.03)QRPS(0.152)S(0.152)PET(0.006)AT(0.003)K;RGEGDAPFS(0.002)EPGT(0.019)T(0.326)S(0.134)T(0.134)QRPS(0.186)S(0.186)PET(0.011)AT(0.001)K	65.387	0.00097162	66587000.0	4282.700000000001	3205.4	5419.9	4225.0	3632.5	3339.1000000000004	3149.3	3849.3999999999996	3928.2	4606.200000000001	True	False	4094.4376359601847	3735.037867515871	4282.337057315866	3854.6008097356757	4110.237420202496	3984.3338174625537	3855.6106924973888	3714.0144201393086	3745.5788394023534	3771.972545009411	1.0854897767952787	0.9902081266359143	1.1353044080296142	1.0219058499870546	1.089678509362597	1.0562997927262519	1.0221735833148193	0.984634531620124	0.9930026782294642	1.0	11.881103459794152	-8.925973816588291	2.6643985006638875	0.9919940810028548	1.0628567448097255	0.4293542171963348	0.03688309219770301	0.26116679354241606	3.7405536796182446	0.01737297616575342	0.010402575335113696	1.1858402397668835e-09	8.925973816588291	0.07086266380687067	
RGEGDAPFSEPGTTST(ph)QRPS(ph)SPETATK	ddPTM_K562_Methotrexat_30min_R1	1	RGEGDAPFSEPGTTSTQRPSSPETATK	27	2	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	RGEGDAPFS(0.001)EPGT(0.011)T(0.04)S(0.08)T(0.534)QRPS(0.536)S(0.534)PET(0.235)AT(0.029)K	60.218	0.012359	13899000.0	1970.4	1275.3	2582.7	1617.8	1639.1	1526.3	1228.9	1674.9	1690.6	2245.7	True	False	1883.7835752903438	1486.021648606411	2040.6265646837928	1475.9699857965397	1854.670380028606	1821.2358736165713	1504.512107455638	1615.9928176576425	1612.0043750047398	1838.9819687220759	1.0243621782759518	0.808067547089143	1.1096501213124137	0.8026016627135304	1.0085310305230628	0.9903500439877415	0.8181222725642798	0.8787431552581288	0.876574323414892	1.0	10.84469161880956	-8.746891889857265	24.996612133789345	0.8832551805473863	0.9527062735051639	0.0882948926132131	0.09782014647849469	536.5242439687377	921897.736318466	0.035081843306074674	0.027047316298379913	1.791051650054045e-09	8.746891889857265	0.06945109295777763	
RGEGDAPFSEPGTTSTQRPS(ph)SPETATK	ddPTM_K562_Methotrexat_30min_R1	2	RGEGDAPFSEPGTTSTQRPSSPETATK	27	2	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	RGEGDAPFS(0.035)EPGT(0.13)T(0.037)S(0.13)T(0.13)QRPS(0.386)S(0.15)PET(0.003)ATK;RGEGDAPFS(0.001)EPGT(0.009)T(0.009)S(0.009)T(0.028)QRPS(0.466)S(0.466)PET(0.012)AT(0.001)K	84.947	0.00015292	445690000.0	3755.6	2734.3	5481.4	3832.9	3017.0	2538.1	2419.3	3250.0	3736.4	4570.8	True	False	3590.5083208284677	3186.096599846711	4330.929047763094	3496.875607961154	3413.7883817621296	3028.551903836875	2961.8896098685223	3135.6956578824647	3562.6955795384533	3742.983828042422	0.9592636478758984	0.8512183718178225	1.1570792839968445	0.9342481209142753	0.9120499950296442	0.8091277021148141	0.79131776837454	0.8377529270604493	0.9518330143044569	1.0	11.869973099596889	-7.797623090001678	2.993336169924091	0.8633524548454312	0.9825826907722667	0.19176710688759135	0.09246061376351211	0.36875075599861573	6.767865618775264	0.030053480515284264	0.03668729541500532	1.5935911528037857e-08	7.797623090001678	0.11923023592683546	
RGEQSISWLR	ddPTM_K562_Methotrexat_30min_R1	1	RGEQSISWLR	10	1	Q7Z304-2;Q7Z304	Q7Z304-2	MAMDC2	MAM domain-containing protein 2	0		96.665	0.011262000000000001	16324000.0	4897.2	4256.2	5154.2	4557.0	4887.7	4910.3	4039.3	5083.7	5334.3	5200.9	False	True	4681.924951741712	4959.4647069698185	4072.403856310531	4157.494885198931	5530.5182212591135	5859.145980619444	4945.2158480312155	4904.90338953141	5086.309557309702	4258.966612248588	1.0993100857557125	1.1644760709573612	0.9561952997232918	0.9761745662063119	1.298558717354957	1.375720101624844	1.161130456812929	1.1516651422965227	1.1942590821636672	1.0	12.056287704728268	-7.7587458504096976	24.99983105704057	1.211625810188781	1.0506528167310105	0.30691210061383634	0.10747509843272719	86.58813300477148	803655.3727438811	0.03370242020964426	0.041539760652067825	1.7428264789248115e-08	7.7587458504096976	-0.16097299345777039	
RGFS(ph)DSGGGPPAK	ddPTM_K562_Methotrexat_30min_R1	2	RGFSDSGGGPPAK	13	1	Q9H307;G3V5F0;G3V579	Q9H307	PNN	Pinin	1	RGFS(0.999)DS(0.001)GGGPPAK;RGFS(0.969)DS(0.031)GGGPPAK	100.77	0.0037045000000000003	136673000.0	8463.4	5873.5	12310.4	8529.5	6300.6	5547.200000000001	5613.0	7578.0	7596.5	10504.6	True	False	8091.35906978902	6843.996042570185	9726.615271569808	7781.731977903068	7129.239336470156	6619.117891715817	6871.858132597035	7311.477444748715	7243.340373076724	8602.115148344803	0.940624361596222	0.795617813124379	1.1307236771227573	0.904630064083763	0.8287774824592933	0.7694756205384499	0.7988567944151853	0.8499627497029694	0.8420417825342026	1.0	13.07047572806208	-7.609314316943803	5.046082648968752	0.8351316457270211	0.9512359995162639	0.1972916741293136	0.0948439306322985	0.300848477890112	13.089093356559966	0.02793660120447795	0.036471323789914356	2.458587578201457e-08	7.609314316943803	0.11610435378924278	
RGFS(ph)LDS(ph)AVPEEHQLLGSS(ph)T(ph)LNK	ddPTM_K562_Methotrexat_30min_R1	1	RGFSLDSAVPEEHQLLGSSTLNK	23	1	Q8IWU9;Q8IWU9-2	Q8IWU9	TPH2	Tryptophan 5-hydroxylase 2	4	RGFS(1)LDS(1)AVPEEHQLLGS(0.521)S(0.604)T(0.875)LNK	47.383	0.026773	0.0	70.044	0.0	0.0	0.0	0.0	56.494	0.0	0.0	0.0	0.0	True	False	66.96494962831747	0.0	0.0	0.0	0.0	67.41066595302013	0.0	0.0	0.0	0.0											0.0														
RGFSDS(ph)GGGPPAK	ddPTM_K562_Methotrexat_30min_R1	2	RGFSDSGGGPPAK	13	1	Q9H307;G3V5F0;G3V579	Q9H307	PNN	Pinin	1	RGFS(0.234)DS(0.766)GGGPPAK;RGFS(0.054)DS(0.946)GGGPPAK	96.435	0.005455399999999999	16235600.0	4939.299999999999	4144.8	6924.599999999999	5940.1	4248.5	3494.4	3668.8	4927.5	5440.200000000001	6106.7	True	False	4722.174286150824	4829.6577504460565	5471.221090258023	5419.340655600213	4807.252217406827	4169.643344536298	4491.621791710674	4754.19703206641	5187.286289424342	5000.717454867129	0.9442993587959657	0.9657929675161746	1.0940872264104742	1.0837126281401168	0.9613125038144267	0.8338090248386343	0.8981954753990431	0.950702989115935	1.0373084134908737	1.0	12.287919378414344	-7.985133469147121	23.350155030346457	0.9335593204847483	1.0230364353213852	0.22768069426743576	0.06699180823401901	155.56762905059048	244339.3145503197	0.022452397254617836	0.025445150111380346	1.0348240914557557e-08	7.985133469147121	0.0894771148366369	
RGGADVNIR	ddPTM_K562_Methotrexat_30min_R1	1	RGGADVNIR	9	1	P08621-2;P08621;P08621-4	P08621-2	SNRNP70	U1 small nuclear ribonucleoprotein 70 kDa	0		156.83	1.2377e-10	1473000.0	1086.1	881.88	1145.1	1255.2	810.68	923.22	767.47	1025.8	945.13	1064.7	False	True	1038.3563444594197	1027.5956806030122	904.7591587173926	1145.1585648237206	917.2986295415722	1101.619198873283	939.5946839522978	989.722032571025	901.1911125921158	871.8725128460586	1.1909497422620963	1.1786077270042905	1.0377195580624303	1.3134472620149162	1.0521017878488093	1.2635094955307868	1.0776743963233493	1.1351682935160663	1.0336271637356158	1.0	9.767973386094493	-9.704780718332227	1.187053855314375	0.9979069287575694	1.1652182373717066	0.32398225650384116	0.08265570027055491	0.5126300868589622	1.4352302664725678	0.07175209680378761	0.02365555133558691	1.973418892813628e-10	9.704780718332227	0.16731130861413723	
RGGDGYDGGYGGFDDYGGYNNYGYGNDGFDDR	ddPTM_K562_Methotrexat_30min_R1	2	RGGDGYDGGYGGFDDYGGYNNYGYGNDGFDDR	32	1	P31942-4;P31942-3;P31942;P31942-5	P31942-4	HNRNPH3	Heterogeneous nuclear ribonucleoprotein H3	0	;	214.6	2.5750999999999993e-62	99151000.0	871.47	738.44	1013.48	766.4300000000001	745.54	702.49	828.5699999999999	1070.49	853.1800000000001	1431.25	False	True	833.1612222687141	860.4546586661321	800.7643980236695	699.2382718593403	843.5915777722698	838.236250315735	1014.397914292878	1032.8402599404913	813.5158480223266	1172.0367559039375	0.7108661209401539	0.7341533056294838	0.6832246463175783	0.5966009754703046	0.7197654625785578	0.7151962138501725	0.865500087077491	0.8812353833936799	0.6941043819013164	1.0	10.194802099071424	-8.69272600371925	4.46046793562601	0.8506832448188463	0.6889535974164062	0.5259556154022162	0.07761316486646842	0.18011089036556122	6.9182014965728715	0.03053231327854714	0.02277690564410032	2.02896238767405e-09	8.69272600371925	-0.1617296474024401	
RGGGAAGAGGGGSGAGGGSGGS(ph)GGR	ddPTM_K562_Methotrexat_30min_R1	1	RGGGAAGAGGGGSGAGGGSGGSGGR	25	1	C9JRT7;Q6PID8	C9JRT7	KLHDC10	Kelch domain-containing protein 10	1	RGGGAAGAGGGGSGAGGGSGGS(1)GGR	72.66199999999999	0.00070882	16923000.0	222.81	0.0	133.1	126.16	145.66	0.0	0.0	0.0	0.0	0.0	True	False	213.01553918516097	0.0	105.16412891912059	115.09974867603619	164.81684311815434	0.0	0.0	0.0	0.0	0.0											0.0														
RGGGSGGGEES(ph)EGEEVDED	ddPTM_K562_Methotrexat_30min_R1	3	RGGGSGGGEESEGEEVDED	19	1	Q96QR8	Q96QR8	PURB	Transcriptional activator protein Pur-beta	1	RGGGS(0.001)GGGEES(0.999)EGEEVDED;RGGGS(0.023)GGGEES(0.977)EGEEVDED;RGGGS(0.001)GGGEES(0.999)EGEEVDED	112.57	0.00034458	79436100.0	6324.0	5059.6	7062.099999999999	7451.799999999999	4958.6	5117.7	4237.799999999999	6349.9	6466.099999999999	7710.8	True	False	6046.004532143788	5895.612901504744	5579.861719306701	6798.51226366587	5610.742813989291	6106.623095333509	5188.234525978924	6126.570417842419	6165.492422346003	6314.299400820316	0.9575099545261233	0.9336923270915568	0.8836865921469924	1.0766851288018822	0.8885772526498152	0.9671101586567423	0.8216643204002806	0.9702692300346879	0.9764333350339737	1.0	12.62440695421985	-9.504553345933074	24.871614929629953	0.9832615871287615	0.9331593676700287	0.1185172821889886	0.06287972725664014	1557.2310788036928	2113523.709271485	0.034738056791086734	0.016168040944812397	3.1292960654096135e-10	9.504553345933074	-0.05010221945873283	
RGLDEDRGSWR	ddPTM_K562_Methotrexat_30min_R1	2	RGLDEDRGSWR	11	2	Q14152-2;Q14152	Q14152-2	EIF3A	Eukaryotic translation initiation factor 3 subunit A	0	;	115.23	0.0063269	43194000.0	3148.2	2922.6000000000004	3454.1000000000004	4582.3	2986.4	2751.3999999999996	3096.6	3342.8999999999996	2805.8	4331.4	False	True	3009.80889754824	3405.509974293967	2729.1316130693785	4180.576873479712	3379.163945407497	3283.069110049554	3791.09137598432	3225.328312226244	2675.3589704177807	3546.9414878758544	0.8485645753775078	0.9601257832796711	0.7694323750188969	1.1786427511617399	0.9526979672368845	0.9256056580780179	1.0688339204193298	0.9093266193567198	0.7542720903524023	1.0	11.792359815711166														
RGLLYDS(ph)DEEDEERPAR	ddPTM_K562_Methotrexat_30min_R1	4	RGLLYDSDEEDEERPAR	17	2	P49736	P49736	MCM2	DNA replication licensing factor MCM2	1	RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLY(0.001)DS(0.999)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR	172.09	2.0946000000000002e-06	830619000.0	9462.13	7299.18	11547.54	10552.460000000001	8486.3	8295.869999999999	8398.65	9409.359999999999	9981.989999999998	11767.75	True	False	9046.186094834558	8505.245430153653	9123.869160471095	9627.34221555109	9602.397197264812	9898.929467902453	10282.261055645133	9078.427475523975	9517.92946365407	9636.49644317105	0.9387422231910002	0.8826076448335054	0.9468035622984916	0.999050046074946	0.9964614477774852	1.0272332404498916	1.0670123852877782	0.9420879807367589	0.987696049055152	1.0	13.234293003441044	-7.125807173898103	2.9176969110691067	1.004322681625091	0.9105986415459753	0.5768706137530328	0.032267482429382266	0.19054466449278065	3.104426090146511	0.009578150587413984	0.019006195006189594	7.485017604089299e-08	7.125807173898103	-0.09372404007911572	
RGLLYDS(ph)DEEDEERPARK	ddPTM_K562_Methotrexat_30min_R1	1	RGLLYDSDEEDEERPARK	18	3	P49736	P49736	MCM2	DNA replication licensing factor MCM2	1	RGLLYDS(1)DEEDEERPARK	60.036	0.027912	68926000.0	1347.9	992.92	1963.3	1680.9	976.39	929.86	1019.5	1286.9	1623.5	1689.5	True	False	1288.6479299298892	1156.9831532457295	1551.2301600819637	1533.5381067656092	1104.8023990947052	1109.542284898844	1248.1488270412751	1241.6389975781358	1548.023839358924	1383.5151784102725	0.9314302799414239	0.8362634333908504	1.1212238103989607	1.1084360552717032	0.7985473642321568	0.8019733373462249	0.9021576680318463	0.897452385744579	1.1189062928371196	1.0	10.434122756363557	-9.753107966226425	24.988000699258624	1.059453156145517	0.925368480795849	0.19552748598859482	0.10933749874655779	291.5391701308511	874418.5423366039	0.08365344668992306	0.03043798007673879	1.765598835738366e-10	9.753107966226425	-0.13408467534966795	
RGLQPECCAVFR	ddPTM_K562_Methotrexat_30min_R1	1	RGLQPECCAVFR	12	1	H7C155	H7C155	RAF1		0		70.942	0.018672	28115000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	False	True	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
RGNDPLTS(ph)SPGR	ddPTM_K562_Methotrexat_30min_R1	1	RGNDPLTSSPGR	12	1	P49736;F8WDM3;C9JZ21;C9J013	P49736	MCM2	DNA replication licensing factor MCM2	1	RGNDPLT(0.006)S(0.497)S(0.497)PGR	84.62	0.01842	11690000.0	1003.1	835.59	1387.9	1026.0	811.94	1051.5	802.69	1137.8	1051.1	970.23	True	False	959.0049250780256	973.6570448984804	1096.598756775714	936.0521729677639	918.7243416267623	1254.6874933550582	982.7136655005015	1097.7829290888208	1002.2345904220296	794.5119452790757	1.2070365093644642	1.2254781701947592	1.380216827816892	1.1781473878771849	1.1563379847033721	1.5791927368874787	1.2368771436851327	1.3817072677280136	1.2614468497009073	1.0	9.633925100053785	-10.039824815881678	22.446302748154192	0.9999999981102733	1.2948245773466676	0.34591877737665855	0.12015463599319474	2322.9540077372085	1309275.867548238	0.11532325065056097	0.029776335278332625	9.123787971575079e-11	10.039824815881678	0.29482457923639427	
RGNDPLTSS(ph)PGR	ddPTM_K562_Methotrexat_30min_R1	4	RGNDPLTSSPGR	12	1	P49736;F8WDM3;C9JZ21;C9J013	P49736	MCM2	DNA replication licensing factor MCM2	1	RGNDPLTS(0.008)S(0.992)PGR;RGNDPLT(0.001)S(0.089)S(0.909)PGR;RGNDPLT(0.001)S(0.364)S(0.635)PGR;RGNDPLTS(0.002)S(0.998)PGR	198.52	1.6073e-07	228339000.0	16649.1	15443.61	21006.699999999997	19167.600000000002	16526.8	15867.099999999999	15624.400000000001	16785.9	16941.5	19491.300000000003	True	False	15917.22549906944	17995.40405601385	16597.680743540866	17487.20626761883	18700.363880578843	18933.192511473186	19128.569429351362	16195.530382661304	16153.893362795941	15961.236695441343	0.9972426199039782	1.1274442199803654	1.0398743568711877	1.0956047204420767	1.1716112126775124	1.1861983424430174	1.198439055465836	1.0146789181622047	1.0120702844667182	1.0	13.962284817153478	-9.372609899163612	8.773522447672295	1.0087441503932895	1.1180114353317503	0.4079954993645285	0.05947299951744377	0.3648658402821762	26.351648071711367	0.03526762952789063	0.01686449103661217	4.240236702207119e-10	9.372609899163612	0.10926728493846083	
RGPGLYYVDSEGNR	ddPTM_K562_Methotrexat_30min_R1	1	RGPGLYYVDSEGNR	14	1	P28074-3;P28074	P28074-3	PSMB5	Proteasome subunit beta type-5	0		130.47	0.00058481	8336900.0	760.87	708.88	988.01	997.06	764.33	772.26	902.43	1128.0	1075.5	1218.3	False	True	727.4230658400138	826.0103711002222	780.6402029555244	909.6492978355158	864.8527921220573	921.4883153764882	1104.8228994476292	1088.3276006435137	1025.5002397477815	997.6540644316276	0.7291335662070731	0.8279526947758266	0.7824758408619946	0.9117882944262359	0.8668864518832704	0.9236551508477724	1.1074208373791938	1.0908867506729836	1.0279116542586515	1.0	9.962395838957875	-8.150320960601313	0.9488439151400642	1.0670294247724172	0.7852397147402276	0.8128449872355662	0.05274120231512866	0.22737280506524585	0.4407672824592497	0.030408289529684853	0.031211759791201887	7.0742277805648075e-09	8.150320960601313	-0.28178971003218967	
RGPLAGLGPGST(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	RGPLAGLGPGSTPR	14	1	Q8WUM0	Q8WUM0	NUP133	Nuclear pore complex protein Nup133	1	RGPLAGLGPGS(0.038)T(0.962)PR	118.16	0.0063251	19368000.0	1514.0	1223.6	1367.1	1374.0	1085.7	1318.7	1046.9	1414.7	1581.1	1629.6	True	False	1447.446372812414	1425.7791023561547	1080.164392526895	1253.5435532726196	1228.4885800726356	1573.520111733063	1281.69397452625	1364.9441991404071	1507.5950061043382	1334.4636488531394	1.0846652691187009	1.0684285807121785	0.8094371049036866	0.9393613339336265	0.9205860205547146	1.1791404832086456	0.9604562669262362	1.0228410495208793	1.1297385338296706	1.0	10.38204429127828	-8.206915613367462	24.99998062251514	1.05373990978404	0.9602589879376995	0.20271728327879934	0.09272603763834092	549.4344800987478	251924.05165295766	0.03174531750695472	0.03174531007991971	6.209896854004957e-09	8.206915613367462	-0.0934809218463406	
RGPNYTSGYGTNSELS(ph)NPSETESER	ddPTM_K562_Methotrexat_30min_R1	1	RGPNYTSGYGTNSELSNPSETESER	25	1	E7EU85;E9PFF5;B4DXZ6;P51114-3;P51114-2;P51114	E7EU85	FXR1	Fragile X mental retardation syndrome-related protein 1	1	RGPNYTSGYGT(0.02)NS(0.228)ELS(0.662)NPS(0.08)ET(0.01)ES(0.001)ER	86.434	0.00020135	18890000.0	1831.9	1784.5	2214.9	1798.9	1481.5	1559.5	1771.6	2165.0	1812.0	1713.9	True	False	1751.3718694551262	2079.358293686303	1750.0227583993997	1641.1932299724285	1676.343217626978	1860.8513037443772	2168.926397240142	2088.8557228663194	1727.7605155025367	1403.4961019694385	1.2478637218853228	1.4815561587727029	1.2469024715805779	1.1693607325801934	1.1944053248702793	1.325868522992804	1.5453740086606744	1.488323138151334	1.2310404803248673	1.0	10.454809341617498	-8.518616498866994	24.886142496097587	1.3681270185364776	1.271917914169379	0.0	0.16181859304309446	518.7259110400101	3028745.1981220446	0.060671804823870135	0.048174790823646285	3.029587506308899e-09	8.518616498866994	-0.09620910436709851	
RGPNYTSGYGTNSELSNPS(ph)ETESER	ddPTM_K562_Methotrexat_30min_R1	1	RGPNYTSGYGTNSELSNPSETESER	25	1	E7EU85;E9PFF5;B4DXZ6;P51114-3;P51114-2;P51114	E7EU85	FXR1	Fragile X mental retardation syndrome-related protein 1	1	RGPNYTSGYGTNSELSNPS(0.87)ET(0.115)ES(0.015)ER	131.83	1.3217e-12	20753000.0	1129.9	770.75	1008.1	1046.6	893.41	662.05	598.36	860.58	991.91	1047.9	True	False	1080.2309489040588	898.1033369900346	796.5135865016191	954.8462029513274	1010.9090746271477	789.9817926540331	732.5574616463149	830.3129136186126	945.7963206027166	858.1151556413874	1.2588414757651654	1.046600017591763	0.9282129342026071	1.1127250191003089	1.1780575928315313	0.9206011424697087	0.8536819992402698	0.9676008029458536	1.102178786127828	1.0	9.745027454428413	-8.274457267437006	24.589857692642074	0.9595919330769879	1.0922693965331114	0.3122050157368832	0.09964421317281548	872.8696667683072	1648782.7254014327	0.03703597986082271	0.03285876362655116	5.315482988211685e-09	8.274457267437006	0.13267746345612352	
RGPSASSVAVMTS(ph)STSDHHLDAAAAR	ddPTM_K562_Methotrexat_30min_R1	1	RGPSASSVAVMTSSTSDHHLDAAAAR	26	1	C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3	C9JMQ4	NCKIPSD	NCK-interacting protein with SH3 domain	1	RGPSASSVAVMT(0.02)S(0.339)S(0.237)T(0.237)S(0.167)DHHLDAAAAR	104.05	3.8474e-08	15046000.0	1134.6	932.1	1459.8	1266.3	1169.5	1030.5	1053.4	1561.8	1389.3	1360.6	True	False	1084.7243425316808	1086.1136820089675	1153.40792934735	1155.2854450575824	1323.3097489130962	1229.6295405633732	1289.651764988013	1506.8706087633338	1324.7117462404394	1114.1821555164347	0.973561044000835	0.9748080030105516	1.0352058894828862	1.0368909960886026	1.1876960534336765	1.1036162574273392	1.157487362908129	1.3524454698028117	1.1889543731082484	1.0	10.121769400084327	-7.586115675833397	0.9880505465077766	1.193832621101278	0.9670348180774241	0.442422094006931	0.08594630671179247	0.48570881185653364	0.9847602705448256	0.037399781476952165	0.07258989431918948	2.593488485509604e-08	7.586115675833397	-0.22679780302385388	
RGPSASSVAVMTSS(ph)TSDHHLDAAAAR	ddPTM_K562_Methotrexat_30min_R1	1	RGPSASSVAVMTSSTSDHHLDAAAAR	26	1	C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3	C9JMQ4	NCKIPSD	NCK-interacting protein with SH3 domain	1	RGPSASSVAVMT(0.007)S(0.052)S(0.314)T(0.314)S(0.314)DHHLDAAAAR	79.445	0.00023158	9177100.0	949.09	747.89	1218.1	1059.6	686.59	727.21	853.06	1123.7	976.11	1007.4	True	False	907.3691400082785	871.4661105435966	962.437456321419	966.7065131351297	776.8886195008481	867.7330404590889	1044.380420201894	1084.1788340807764	930.7308591540743	824.9500980944116	1.0999079121322008	1.056386456049444	1.1666614241814086	1.171836351517707	0.9417401383373578	1.0518612488967556	1.26599223712362	1.3142356569023612	1.1282268603931442	1.0	9.68816304197058	-8.751857718601602	24.997489032290915	1.2032999977399406	1.0819002162007891	0.16137543351016725	0.09999965628185631	286.31026670089966	746952.7625178583	0.038811253063805146	0.029666686401083584	1.7706889676162166e-09	8.751857718601602	-0.12139978153915143	
RGPSASSVAVMTSSTS(ph)DHHLDAAAAR	ddPTM_K562_Methotrexat_30min_R1	2	RGPSASSVAVMTSSTSDHHLDAAAAR	26	1	C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3	C9JMQ4	NCKIPSD	NCK-interacting protein with SH3 domain	1	RGPSASSVAVMTS(0.001)S(0.003)T(0.23)S(0.766)DHHLDAAAAR;RGPSASSVAVMT(0.001)S(0.004)S(0.012)T(0.068)S(0.916)DHHLDAAAAR	132.16	2.3762e-13	38132000.0	2277.2	1964.67	3301.6	2510.7	2136.43	1911.8899999999999	2159.45	2517.5	2504.53	3073.3	True	False	2177.097014642289	2289.29832381993	2608.639279033574	2290.590829113221	2417.4079921935922	2281.335683947316	2643.7616327163128	2428.9580980674173	2388.094946960028	2516.695589114111	0.8650617198437726	0.9096445091421541	1.0365334966680764	0.9101580815022289	0.9605484281253623	0.9064805826398563	1.0504892384092148	0.9651378214249671	0.9489009943394263	1.0	11.297315008258806	-6.533323071124202	23.94891183968469	0.9691246214509436	0.8762073824812424	0.3797239359649245	0.04487921717174756	107.08215084512675	245540.4462773237	0.011164495868585004	0.029617455954443594	2.928713768171069e-07	6.533323071124202	-0.09291723896970117	
RGQMPENPYS(ph)EVGK	ddPTM_K562_Methotrexat_30min_R1	3	RGQMPENPYSEVGK	14	1	H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;Q9UPX8;Q9UPX8-3;A0A590UJF3	H7C1X5	SHANK2	SH3 and multiple ankyrin repeat domains protein 2	1	RGQMPENPYS(1)EVGK;RGQMPENPYS(1)EVGK;RGQMPENPYS(1)EVGK	86.288	0.018693	93206000.0	0.0	0.0	0.0	59.066	0.0	45.629	0.0	0.0	56.093999999999994	55.317	True	False	0.0	0.0	0.0	53.88777548588104	0.0	54.446158472941455	0.0	0.0	53.4862021835537	45.29855526731046	0.0	0.0	0.0	1.1896135576043185	0.0	1.2019402859903643	0.0	0.0	1.1807485220649372	1.0	5.501393133195864	-9.476063209170821	0.20782844511763196	1.1468696994618868	1.0169005263884911e-23	0.2078789763209835	0.5005802614513908	5.180165690009299	1.126554736947447	2.3920439156687103	2.321331797099804	3.3414640331744674e-10	9.476063209170821	-1.1468696994618868	
RGRS(ph)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK	ddPTM_K562_Methotrexat_30min_R1	4	RGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFK	33	2	M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;M0R0K8;M0QYI8;M0QYZ0	M0R3F1	HNRNPUL1	Heterogeneous nuclear ribonucleoprotein U-like protein 1	1	RGRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;RGRS(0.986)PQPPAEEDEDDFDDT(0.009)LVAIDT(0.002)Y(0.002)NCDLHFK;RGRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;RGRS(0.879)PQPPAEEDEDDFDDT(0.081)LVAIDT(0.02)Y(0.02)NCDLHFK	125.99	8.419400000000001e-22	292216000.0	3725.8899999999994	2650.15	4741.41	4084.08	2535.79	2481.54	2533.49	3631.65	3250.47	5345.3099999999995	True	False	3562.1043368547153	3088.0422426521445	3746.252836201408	3726.0350473432622	2869.29083214736	2961.062484317939	3101.6896241498794	3503.9228110611857	3099.3563591752386	4377.2225618870725	0.8137818642968545	0.7054798331572276	0.8558515778522247	0.8512327154178161	0.6555048987297495	0.6764706254829752	0.7085976507469851	0.8004899822938414	0.7080646038338679	1.0	12.095800024994467	-12.387050384776078	4.84563523415575	1.0002652775015268	0.7523543687974862	0.534984651822288	0.06913074012401607	0.0002094112256652944	2.6489500349385164e-05	0.0707510058395275	0.01714142958861767	4.1015651582195486e-13	12.387050384776078	-0.24791090870404064	
RGS(ph)DASDFDLLETQSACSDTSESSAAGGQGNSR	ddPTM_K562_Methotrexat_30min_R1	2	RGSDASDFDLLETQSACSDTSESSAAGGQGNSR	33	1	Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;H3BQK9;H3BPE1;A0A590UJG2;H0Y390;Q9UPN3-5;H0Y6T5;H0Y4F5;H0Y314	Q9UPN3	MACF1	Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5	1	RGS(0.732)DAS(0.131)DFDLLET(0.131)QS(0.006)ACSDTSESSAAGGQGNSR;RGS(0.911)DAS(0.088)DFDLLETQS(0.001)ACSDTSESSAAGGQGNSR	77.024	1.3863e-06	35862000.0	714.31	531.63	844.77	564.61	463.90000000000003	534.85	625.11	619.49	757.54	849.3	True	False	682.9097876906441	619.4728213350792	667.464321465105	515.1115179135764	524.910981206315	638.2021928872592	765.3068300851118	597.7021855697254	722.3221307471256	695.4835401147351	0.9819208483035893	0.8907080981857366	0.9597126070805245	0.7406523493404281	0.7547424934308575	0.9176380979224525	1.1003953162699693	0.8594052211086426	1.0385898286362936	1.0	9.441872560939297	-8.527767493946348	24.97871688357175	0.9909007115567855	0.8623331372476082	0.32419431589443437	0.09088908756226513	178.4656999116804	911843.7750066073	0.03581797123862002	0.0278465198877799	2.966419081361028e-09	8.527767493946348	-0.1285675743091773	
RGS(ph)FSSENYWR	ddPTM_K562_Methotrexat_30min_R1	1	RGSFSSENYWR	11	1	Q6P6C2-3;Q6P6C2;K7ER58;Q6P6C2-1	Q6P6C2-3	ALKBH5	RNA demethylase ALKBH5	1	RGS(0.969)FS(0.003)S(0.028)ENYWR	136.24	7.8133e-05	76078000.0	1517.7	1373.4	2044.0	1675.4	1372.1	1401.1	1276.8	1751.3	1795.9	2351.7	True	False	1450.9837252426676	1600.3310061915206	1614.992332912716	1528.5202832263078	1552.5552000715336	1671.8427455442436	1563.1549017815598	1689.7057863537104	1712.4090009884135	1925.7843415610762	0.7534507857024497	0.8310021904603622	0.8386153620937501	0.7937131122310721	0.8061936981027709	0.8681360157851409	0.8116977940086675	0.8774117381097843	0.8892008123818803	1.0	10.911230437074726	-10.674113295754283	0.31632373764917376	1.0391081553747645	0.7915556097027516	0.8270533598594549	0.026754946722455795	1.4998074292607848	0.2765167147627569	0.11097388214808386	0.03153768709333055	2.1178085838566748e-11	10.674113295754283	-0.2475525456720129	
RGS(ph)GDTSISIDTEASIR	ddPTM_K562_Methotrexat_30min_R1	1	RGSGDTSISIDTEASIR	17	1	Q32MZ4-3;Q32MZ4-2;Q32MZ4;Q32MZ4-4	Q32MZ4-3	LRRFIP1	Leucine-rich repeat flightless-interacting protein 1	1	RGS(0.913)GDT(0.064)S(0.021)IS(0.002)IDTEASIR	66.137	0.029869999999999997	2336100.0	570.13	621.66	704.74	734.76	552.12	305.1	423.89	697.23	501.39	735.63	True	False	545.0677678543865	724.3787485867339	556.8247048419311	670.3447315884939	624.7334575202212	364.0562569877588	518.9581228980147	672.7080257062736	478.0804883376474	602.4002785995555	0.9048265534032386	1.2024874063318012	0.9243433720456151	1.1127895444319746	1.0370736530411064	0.604342776590521	0.8614838693376357	1.1167126736232058	0.7936259416231953	1.0	9.234578627005854	-8.053837265492986	24.998850618276908	0.874894890081956	1.0443781451075902	0.22882073356712318	0.14753702048906533	474.39770530583036	220280.94697460078	0.04839386647760934	0.04839414127932023	8.834108613354922e-09	8.053837265492986	0.16948325502563422	
RGS(ph)GDTSSLIDPDTSLSELR	ddPTM_K562_Methotrexat_30min_R1	2	RGSGDTSSLIDPDTSLSELR	20	1	Q9Y608-2;Q9Y608-5;C9JSU1;Q9Y608-4;Q9Y608	Q9Y608-2	LRRFIP2	Leucine-rich repeat flightless-interacting protein 2	1	RGS(0.988)GDT(0.002)S(0.002)S(0.002)LIDPDT(0.002)S(0.002)LS(0.002)ELR;RGS(0.953)GDT(0.041)S(0.005)SLIDPDTSLSELR	96.805	0.00028497	147862000.0	2350.67	2229.97	3637.7	2827.52	2627.7400000000002	2430.7799999999997	1993.25	2694.51	2747.47	3252.7	True	False	2247.3373614127836	2598.4346394909726	2874.196482111834	2579.635711608005	2973.3338688404424	2900.4938327128953	2440.287051986291	2599.742556037195	2619.740719386178	2663.604510692568	0.8437203617846591	0.9755332028685255	1.0790627777411705	0.9684755004928527	1.1162820369557571	1.088935621286635	0.9161596784320613	0.9760242354302184	0.9835321681089266	1.0	11.379164173070015	-6.31232262985463	3.479644277959162	1.0166300826283248	0.8311918209757806	0.4333918631569794	0.05893462649018461	0.25248626497869486	5.256026666607444	0.015816339551351536	0.11281504691151013	4.871664481193541e-07	6.31232262985463	-0.18543826165254418	
RGS(ph)GDTSSLIDPDTSLSELRESLSEVEEK	ddPTM_K562_Methotrexat_30min_R1	1	RGSGDTSSLIDPDTSLSELRESLSEVEEK	29	2	Q9Y608-2;Q9Y608-5	Q9Y608-2	LRRFIP2	Leucine-rich repeat flightless-interacting protein 2	1	RGS(0.732)GDT(0.195)S(0.041)S(0.032)LIDPDTSLSELRESLSEVEEK	76.79899999999999	9.3728e-05	29347000.0	2358.3	1471.3	3851.0	2978.0	1574.0	1732.0	1399.2	2093.8	1955.2	2991.3	True	False	2254.6319557486886	1714.4073171760474	3042.7277270287996	2716.9233636432778	1781.0085889604218	2066.684487390357	1713.0062175538515	2020.1598672228633	1864.3031787585871	2449.546583710358	0.920428282826763	0.6998876153558239	1.2421595683311901	1.1091535803854446	0.7270768397728148	0.8437008306492073	0.6993156321032851	0.8247076747415445	0.7610809245908295	1.0	11.258299012677575	-7.770587937817006	24.99996885875278	0.7967684853354189	0.9897810313518817	0.2606243863645106	0.15056782018792858	271.9330739250489	743100.6135381479	0.04820568124691054	0.055418053849112525	1.695946165007763e-08	7.770587937817006	0.19301254601646278	
RGS(ph)LEMSSDGEPLSR	ddPTM_K562_Methotrexat_30min_R1	1	RGSLEMSSDGEPLSR	15	1	Q6ZN18-2;Q6ZN18	Q6ZN18-2	AEBP2	Zinc finger protein AEBP2	1	RGS(0.651)LEMS(0.265)S(0.077)DGEPLS(0.007)R	95.755	0.012172	22160000.0	2579.1	1927.3	2962.1	2559.4	2048.9	2214.0	1952.1	2276.4	2259.5	2802.3	True	False	2465.7258521271433	2245.753566501323	2340.3956894915623	2335.021375724849	2318.3662629739547	2641.8241657518765	2389.908116986045	2196.3377217241964	2154.4563381776957	2294.7763151578006	1.0744950764221162	0.9786372430582165	1.0198796606154725	1.0175376834339869	1.0102798463015041	1.151233847195347	1.0414558060408179	0.9571031857077386	0.938852438011826	1.0	11.164137817499345	-9.260049894041176	24.49086556854623	0.9609833527709171	1.04069714763023	0.3671035719324952	0.045972537618108676	105.00710539588118	1850895.0085935055	0.024207792214971203	0.012972248455032892	5.494777433294191e-10	9.260049894041176	0.07971379485931296	
RGS(ph)LSNAGDPEIVK	ddPTM_K562_Methotrexat_30min_R1	3	RGSLSNAGDPEIVK	14	1	F5H7V1;O43847;O43847-2	F5H7V1	NRD1	Nardilysin	1	RGS(0.999)LS(0.001)NAGDPEIVK;RGS(0.843)LS(0.157)NAGDPEIVK;RGS(0.997)LS(0.003)NAGDPEIVK	165.89	1.7961e-05	67820000.0	10632.5	8815.9	15201.9	11475.4	9364.4	8450.1	7769.5	10956.5	11733.2	13250.2	True	False	10165.108030996025	10272.577630321695	12011.228936255287	10469.369498707874	10595.982738539367	10082.962232619666	9512.00815271917	10571.153684796685	11187.726092988067	10850.460382936833	0.9368365647398172	0.94674117666713	1.1069787375237874	0.9648779064869678	0.9765468343815483	0.9292658446526273	0.8766455815715912	0.9742585394275639	1.0310830783347782	1.0	13.40546863678961	-5.083113674589581	15.718530973327438	0.9723615948007193	0.2892450393738002	0.0	0.059454370622217555	0.0	0.0	0.014311066563492356	0.0	8.258217662246484e-06	5.083113674589581	-0.6831165554269191	
RGS(ph)NVALMLDVR	ddPTM_K562_Methotrexat_30min_R1	1	RGSNVALMLDVR	12	1	H7C5I3;J3KR55;P35236;P35236-2;P35236-3;C9JBA9;F8WF66;E9PE54;C9IYI6;E7EUM0	H7C5I3	PTPN7	Tyrosine-protein phosphatase non-receptor type 7	1	RGS(1)NVALMLDVR	52.111999999999995	0.033252	7607800.0	1582.7	1524.3	2106.0	1821.1	1747.5	1672.0	1583.9	2416.9	2326.9	2941.5	True	False	1513.1264030714697	1776.1646663300803	1663.9793801928474	1661.4469904401524	1977.3268800561227	1995.090336556974	1939.1298942135115	2331.89625708804	2218.7229268889932	2408.765846282224	0.6281749657846085	0.737375394570409	0.6908016330275909	0.6897503105187619	0.8208879593290481	0.8282624646294567	0.8050304670362353	0.9680875626359334	0.9211036142485373	1.0	11.234078442113061	-8.586753725791052	0.4677475174983696	1.0065045504241596	0.6484031827409631	0.8814822404068892	0.04086521803927402	0.3380857055501262	0.1610354068738789	0.04013954867664279	0.04401752459361959	2.5896810223389265e-09	8.586753725791052	-0.35810136768319656	
RGS(ph)SGSVDETLFALPAASEPVIR	ddPTM_K562_Methotrexat_30min_R1	3	RGSSGSVDETLFALPAASEPVIR	23	1	Q9NQC3-5;Q9NQC3	Q9NQC3-5	RTN4	Reticulon-4	1	RGS(0.619)S(0.221)GS(0.16)VDETLFALPAASEPVIR;RGS(0.512)S(0.244)GS(0.244)VDETLFALPAASEPVIR;RGS(0.587)S(0.206)GS(0.206)VDETLFALPAASEPVIR	137.31	1.5894e-13	39584000.0	6658.8	5037.7	6752.2	6674.5	5547.7	5431.3	4787.0	7101.799999999999	7487.9	8474.599999999999	True	False	6366.087125021993	5870.0942987410945	5335.005494272623	6089.356947829771	6277.319789692334	6480.821857022658	5860.606606225195	6852.025668661437	7139.789163372764	6939.767819446992	0.9173343101166297	0.8458632120647609	0.768758499286184	0.8774583107472049	0.9045431998606193	0.9338672453654356	0.8444960636582519	0.9873566158020908	1.0288224835656983	1.0	12.760671680702547	-9.349406854624254	4.575789407464735	1.0119246493717833	0.8695527047047151	0.6619433025068602	0.044379725501761946	0.1500267017748769	5.471613042997308	0.02813705269700451	0.012888116529634008	4.4729407496727965e-10	9.349406854624254	-0.14237194466706815	
RGSGDTSSLIDPDT(ph)SLSELRESLSEVEEK	ddPTM_K562_Methotrexat_30min_R1	1	RGSGDTSSLIDPDTSLSELRESLSEVEEK	29	2	Q9Y608-2;Q9Y608-5	Q9Y608-2	LRRFIP2	Leucine-rich repeat flightless-interacting protein 2	1	RGS(0.088)GDT(0.042)S(0.048)S(0.048)LIDPDT(0.63)S(0.024)LS(0.084)ELRES(0.032)LS(0.005)EVEEK	62.717	0.00081791	21399000.0	1209.5	1011.4	1969.1	1381.0	916.07	895.55	879.11	1307.7	1141.9	1876.9	True	False	1156.3318282144076	1178.5166591394375	1555.8128193436544	1259.9298741408204	1036.5492618100213	1068.6023629806207	1076.2727958217324	1261.7074497885847	1088.8133182408092	1536.975222467144	0.7523425305180068	0.7667766154666366	1.0122562788268457	0.8197463795925012	0.6744085699352773	0.6952632334991752	0.7002538362941891	0.8209029211045439	0.7084130585352262	1.0	10.585878192233446	-6.5380973981560135	24.999844013800104	0.7927779878757604	0.7559507446178043	0.016758137487675073	0.11482230362272285	1362.7556474547212	2238608.8163590045	0.03038681998733819	0.08044902135025378	2.896693880433076e-07	6.5380973981560135	-0.036827243257956055	
RGSMS(ph)YLAAVEEEVEESSVK	ddPTM_K562_Methotrexat_30min_R1	1	RGSMSYLAAVEEEVEESSVK	20	1	A0A0C4DGK3;G3V5X4;A0A0A0MRE3;Q8WXH0-7;Q8WXH0;Q8WXH0-2	A0A0C4DGK3	SYNE2	Nesprin-2	1	RGS(0.132)MS(0.461)Y(0.406)LAAVEEEVEESSVK	42.068000000000005	0.033522	10292000.0	2601.6	2393.1	2272.7	2362.2	2311.7	2134.1	2568.1	3035.3	2509.1	2590.1	True	False	2487.236779067882	2788.5190992550806	1795.6913282831358	2155.109593552098	2615.7290693137265	2546.4846215587545	3144.061797670132	2928.5467785755814	2392.4524886575155	2121.0077914178432	1.1726674409834315	1.3147142177120537	0.8466217500704035	1.0160781126180864	1.233248213371802	1.2006012575071636	1.4823433513030149	1.380733625979713	1.1279791136732307	1.0	11.050534205209592	-7.896248180714888	5.293086426575954	1.2712393960037967	1.0872703794668332	0.14808208533669343	0.16670764122096388	0.35170290491072304	15.242588122937537	0.0542041302106458	0.0618463984505497	1.269848233891555e-08	7.896248180714888	-0.1839690165369634	
RGSS(ph)GSVDETLFALPAASEPVIR	ddPTM_K562_Methotrexat_30min_R1	1	RGSSGSVDETLFALPAASEPVIR	23	1	Q9NQC3-5;Q9NQC3	Q9NQC3-5	RTN4	Reticulon-4	1	RGS(0.236)S(0.382)GS(0.382)VDETLFALPAASEPVIR	152.2	4.8885e-22	7745000.0	1788.5	1225.5	1701.7	1701.7	1369.7	1128.3	1414.3	1668.6	2134.8	2039.2	True	False	1709.879681489432	1427.9930450616769	1344.5364251064423	1552.514603059692	1549.839558004503	1346.3280064217897	1731.4927769342585	1609.914392228517	2035.5536139596124	1669.8811197479888	1.0239529396844007	0.8551465299980057	0.8051689483796032	0.9297156454430665	0.9281137080215615	0.8062418279362136	1.0368958343547041	0.9640892235918437	1.218981153740339	1.0	10.705529684334595	-9.143798122219005	1.842409604320185	1.0870315334294205	0.8910550347050749	0.43177271275121787	0.08891516240686442	0.32656493367345546	2.0996681078226938	0.05818818709847985	0.025862235972909757	7.18128028883205e-10	9.143798122219005	-0.19597649872434564	
RGT(ph)GQS(ph)DDSDIWDDTALIK	ddPTM_K562_Methotrexat_30min_R1	1	RGTGQSDDSDIWDDTALIK	19	1	B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637	B4DP61	SMN2;SMN1	Survival motor neuron protein	2	RGT(0.903)GQS(0.765)DDS(0.332)DIWDDTALIK	76.21	0.020066	20820000.0	2415.3	1744.8	2892.8	2370.8	1915.5	1570.0	1560.9	2122.1	2136.7	2713.1	True	False	2309.1263039985615	2033.0985434709223	2285.640812451031	2162.9556449044585	2167.4218247482117	1873.3802801402205	1910.9715587334256	2047.4645401822686	2037.3652833743224	2221.7312995234747	1.039336442032316	0.9150965033021721	1.0287656355839536	0.973545111133996	0.9755553361529761	0.8432074034074374	0.8601272166185434	0.9215626302881075	0.9170169605169195	1.0	11.11746862961332	-8.122595576301382	7.3521843770947655	0.9006148567990304	0.9852087778643817	0.37139248234951205	0.05040826569245456	0.2686416785432031	15.016059205088718	0.016105033932604287	0.01613062267381398	7.540574302318107e-09	8.122595576301382	0.08459392106535124	
RGT(ph)GQSDDSDIWDDTALIK	ddPTM_K562_Methotrexat_30min_R1	1	RGTGQSDDSDIWDDTALIK	19	1	B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637	B4DP61	SMN2;SMN1	Survival motor neuron protein	1	RGT(0.617)GQS(0.377)DDS(0.007)DIWDDTALIK	105.65	0.00045099	65908000.0	3743.1	3132.5	7425.0	4512.2	2859.1	2944.2	2807.3	4249.5	3550.5	5439.7	True	False	3578.5578058613887	3650.092381604004	5866.5939686286265	4116.622431642442	3235.121764102121	3513.124981394164	3436.908486663044	4100.042676360469	3385.438029962338	4454.517618229275	0.8033547316586681	0.8194136143196937	1.316998712637412	0.9241455045089371	0.7262563629478068	0.7886656384559713	0.7715557061887336	0.920423495370591	0.7600010416634272	1.0	12.121053494755332	-7.531148552210166	24.26275124224932	0.8196251104286908	0.9899882258523638	0.1715450066799119	0.1513608080202322	211.4119466629198	620255.6921097977	0.045544266323757486	0.05890974819125749	2.9434146545235844e-08	7.531148552210166	0.170363115423673	
RGTS(ph)LMEDDEEPIVEDVMMSSEGR	ddPTM_K562_Methotrexat_30min_R1	1	RGTSLMEDDEEPIVEDVMMSSEGR	24	1	Q8N3U4;Q8N3U4-2	Q8N3U4	STAG2	Cohesin subunit SA-2	1	RGT(0.463)S(0.537)LMEDDEEPIVEDVMMSSEGR	50.851000000000006	0.021834	51504000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
RHARAS(ph)S(ph)CPS(ph)S(ph)S(ph)DLSR	ddPTM_K562_Methotrexat_30min_R1	1	RHARASSCPSSSDLSR	16	2	Q8NEN0-2;Q8NEN0	Q8NEN0-2	ARMC2	Armadillo repeat-containing protein 2	5	RHARAS(1)S(1)CPS(0.999)S(0.999)S(0.99)DLS(0.012)R	63.461999999999996	0.018983	12155000.0	1441.9	1359.8	1663.0	1641.1	1187.9	1240.3	1235.0	1064.2	1079.8	1595.1	True	False	1378.5158024823102	1584.483837351994	1313.959026239651	1497.2273109721223	1344.129671426991	1479.9704213107746	1511.9801877351395	1026.771482805698	1029.6003336863353	1306.2119331649747	1.055353857579713	1.213037331172409	1.0059309617972214	1.1462361298019335	1.0290287795565771	1.1330247287856114	1.157530527279432	0.7860680619551627	0.7882337525363097	1.0	10.35117327811639	-9.261119217898258	24.99999981401734	0.8403631692587169	1.1056801913637455	0.6591141549913295	0.08131050188018675	15.300978280933323	1194910.6660833496	0.03861792653594815	0.020522737451979137	5.481264784205823e-10	9.261119217898258	0.2653170221050286	
RHEAT(ph)HT(ph)GVK	ddPTM_K562_Methotrexat_30min_R1	1	RHEATHTGVK	10	1	C9J2N8;P16415-2;P16415	C9J2N8	ZNF823	Zinc finger protein 823	2	RHEAT(1)HT(1)GVK	61.78	0.026277999999999996	4884800.0	301.42	172.79	480.85	253.94	450.26	275.44	244.8	266.38	238.74	523.51	True	False	288.1699377101174	201.34061057218054	379.9261562040505	231.67747446728464	509.4770821253614	328.66488175912247	299.70263154458485	257.01126441437856	227.64102950942376	428.69726608438083	0.6721991496288121	0.4696568569498423	0.8862341476403756	0.54042209455491	1.1884309101823864	0.7666596168458678	0.6991008696696334	0.5995169196245604	0.5310064876052113	1.0	8.743815406511876	-6.757911426955202	24.999265005444435	0.7652944115957366	0.5709280161874664	0.14069765806847367	0.2016416201150536	184.06531757593382	1304240.9227249522	0.05219175711747893	0.1271627478440241	1.746178244373931e-07	6.757911426955202	-0.19436639540827028	
RHGAPAAPS(ph)PPPR	ddPTM_K562_Methotrexat_30min_R1	3	RHGAPAAPSPPPR	13	1	Q4KMP7	Q4KMP7	TBC1D10B	TBC1 domain family member 10B	1	RHGAPAAPS(1)PPPR;RHGAPAAPS(1)PPPR;RHGAPAAPS(1)PPPR	94.639	0.0071224999999999995	29770500.0	2056.75	1826.26	3479.5000000000005	2638.57	1930.29	2158.08	2130.41	2032.5700000000002	2495.9	2568.9799999999996	True	False	1966.3377326829122	2128.0184238876695	2749.200500180919	2407.250664744205	2184.1569689862845	2575.098417175163	2608.208673484065	1961.0833610283576	2379.8661537763714	2103.7128280748275	0.9346987414068149	1.0115536662078943	1.3068325978203008	1.1442867261246652	1.0382391264805253	1.224073163793803	1.2398121258170571	0.9322010755731358	1.131269497440989	1.0	11.03872206448783	-9.266811832161764	24.986149391206087	1.023801475256257	1.131672065814044	0.15291448977529598	0.1155576669393122	924.4521796063742	4299393.74253975	0.06329212976559649	0.0317883639991364	5.409886676648526e-10	9.266811832161764	0.10787059055778703	
RHLS(ph)EGTNSYATR	ddPTM_K562_Methotrexat_30min_R1	2	RHLSEGTNSYATR	13	1	Q14149	Q14149	MORC3	MORC family CW-type zinc finger protein 3	1	RHLS(0.894)EGT(0.09)NS(0.015)YAT(0.001)R;RHLS(0.958)EGT(0.027)NS(0.015)YATR	87.49799999999999	0.017572	13049000.0	1064.79	1047.52	1343.76	1391.77	1000.8899999999999	1121.31	1005.28	1152.3000000000002	1133.09	1246.1799999999998	True	False	1017.9831065435469	1220.6048752044132	1061.7231395669237	1269.7556849623256	1132.5245785289685	1337.9872878497013	1230.7396300618473	1111.7729558701421	1080.412893217864	1020.4847262689033	0.9975485966022218	1.196103032004398	1.0404106129533133	1.2442672117247722	1.10979081741841	1.3111291657854116	1.2060343466008336	1.089455752988099	1.058725197356035	1.0	9.995038874185084	-9.67462665418116	2.3443922574202998	1.0148241177408321	1.1613712752342344	0.25507589358703453	0.08860912246833443	0.4048509371143548	4.110801031997643	0.07955671344921554	0.023708528287394753	2.115306704092444e-10	9.67462665418116	0.1465471574934023	
RHLSQDHT(ph)VPGRPAASELHSR	ddPTM_K562_Methotrexat_30min_R1	1	RHLSQDHTVPGRPAASELHSR	21	2	Q8TEK3;Q8TEK3-1	Q8TEK3	DOT1L	Histone-lysine N-methyltransferase, H3 lysine-79 specific	1	RHLS(0.009)QDHT(0.969)VPGRPAAS(0.019)ELHS(0.003)R	48.567	0.021816	7120100.0	630.71	452.76	692.88	609.76	663.55	517.88	527.79	650.9	715.43	653.23	True	False	602.9847435908301	527.5708943958585	547.4539567654415	556.303287513474	750.8184556573615	617.9529805598831	646.1603427406712	628.0074780663679	682.1698154558388	534.9237170718808	1.1272350137913283	0.9862544463044733	1.023424348731722	1.0399675126738122	1.4035991145938846	1.1552170166290183	1.2079485768133233	1.1740131499571909	1.2752656008411227	1.0	9.063189360075805	-7.602493086366874	24.999992445726612	1.210404884390018	1.0383460581141788	0.3717162007863919	0.10050606215448779	29.336614701492742	9210.172287766587	0.027880110745703752	0.035993067143531406	2.4975081472407483e-08	7.602493086366874	-0.17205882627583913	
RHMSVALSWAVTS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	RHMSVALSWAVTSR	14	1	P55345-3;P55345	P55345-3	PRMT2	Protein arginine N-methyltransferase 2	1	RHMSVALSWAVT(0.005)S(0.995)R	89.74700000000001	0.01316	42017000.0	4160.2	2980.5	5901.7	4503.5	3391.1	2660.7	2860.5	4039.9	3832.5	4776.5	True	False	3977.3225892828273	3472.9769651622423	4663.013821502432	4108.68514713482	3837.0890889604084	3174.842618706423	3502.0399409039433	3897.8144271628807	3654.3279115140567	3911.4295647686677	1.0168462766420943	0.8879047692547785	1.192150783821724	1.0504305597479981	0.9809940394995568	0.8116834436450325	0.8953350387407687	0.9965191402835367	0.9342691338301482	1.0	11.933480270472119	-8.00321446484156	11.346734576157502	0.922107323127874	1.034635155379696	0.26937601823204504	0.08459876868816436	0.21267631900286277	639.5151062447442	0.027907958994303237	0.03033056015592027	9.926257454027237e-09	8.00321446484156	0.11252783225182195	
RHNS(ph)SDGFFNNGPLR	ddPTM_K562_Methotrexat_30min_R1	1	RHNSSDGFFNNGPLR	15	1	Q9HC44	Q9HC44	GPBP1L1	Vasculin-like protein 1	1	RHNS(0.956)S(0.044)DGFFNNGPLR	81.60600000000001	0.018435	31058000.0	1024.3	1141.2	1157.7	1304.9	929.9	878.78	977.65	1036.9	934.17	1163.0	True	False	979.2729984621898	1329.7639029166764	914.7145909065805	1190.5014429879488	1052.1981492212801	1048.591797822689	1196.9128992220717	1000.4316392794855	890.7406405998926	952.3694302995835	1.0282490883334456	1.3962689903836762	0.9604619402985687	1.2500416383728916	1.1048214230167948	1.1010347082358964	1.2567737488650417	1.050465929975076	0.9352889879295007	1.0	9.895377502672973	-9.501516621748003	6.009404377586859	0.9739176626720177	1.158023207379318	0.2985975973261894	0.11796442018819474	0.18739449287178808	24.944677442253624	0.06621375518000666	0.028536157413640736	3.15125376999505e-10	9.501516621748003	0.18410554470730023	
RHQDGLPYIDDS(ph)PSSSPHLSSK	ddPTM_K562_Methotrexat_30min_R1	2	RHQDGLPYIDDSPSSSPHLSSK	22	1	P11274;P11274-2	P11274	BCR	Breakpoint cluster region protein	1	RHQDGLPY(0.005)IDDS(0.969)PS(0.015)S(0.005)S(0.006)PHLSSK;RHQDGLPYIDDS(0.987)PS(0.004)S(0.008)S(0.002)PHLSSK	112.26	2.9081999999999997e-05	44900000.0	5781.6	3948.8999999999996	7928.1	6652.1	3956.1000000000004	4373.6	3729.3	4632.9	5673.4	6485.9	True	False	5527.447786692369	4601.388605176708	6264.1001538969185	6068.920721051527	4476.396492240358	5218.736301414821	4565.690456777858	4469.958281047282	5409.644872324558	5311.2406603439995	1.040707461810696	0.8663491073813786	1.1794043152040494	1.1426559459759924	0.8428156015717861	0.9825832861199728	0.8596278626324093	0.8416034156429604	1.0185275377776206	1.0	12.374833186267301	-7.765829058205879	24.99996645412016	0.9159643872794244	1.052364564672776	0.3063689041078137	0.09752060476542287	142.16465907381132	809651.8814603223	0.03072050235878262	0.03604050032756041	1.7146320676492372e-08	7.765829058205879	0.13640017739335153	
RHS(ph)EVETDSK	ddPTM_K562_Methotrexat_30min_R1	3	RHSEVETDSK	10	1	Q9NX58	Q9NX58	LYAR	Cell growth-regulating nucleolar protein	1	RHS(1)EVETDSK;RHS(0.999)EVETDSK;RHS(0.998)EVET(0.002)DSK	81.789	0.018511	6537400.0	4208.8	3543.59	5851.2	5284.6	3497.59	3112.8	3296.2599999999998	3645.99	4027.4	4219.1	True	False	4023.7861914748228	4129.108016768758	4623.1130813791	4821.307322870809	3957.584390509582	3714.304545235974	4035.5302134605918	3517.758465133196	3840.16705305459	3454.9801060851014	1.1646336788996003	1.195117740185058	1.3381012160494405	1.395466015673797	1.1454724105471017	1.0750581569758204	1.168032836528637	1.0181703966797162	1.111487457276838	1.0	11.754461688203262	-7.962605441638174	8.374791776647863	1.0846059514239426	1.2725892368014144	0.608222130645046	0.07510159430565376	0.19029841475464665	38.003919126779294	0.024718123756636616	0.027949609475941897	1.0899198404258107e-08	7.962605441638174	0.1879832853774719	
RHS(ph)IAIGEVPACR	ddPTM_K562_Methotrexat_30min_R1	1	RHSIAIGEVPACR	13	1	Q8WUY9-2;Q8WUY9	Q8WUY9-2	DEPDC1B	DEP domain-containing protein 1B	1	RHS(1)IAIGEVPACR	77.027	0.028429000000000003	19071000.0	820.27	737.73	765.62	809.63	787.51	549.05	506.57	906.25	708.31	702.88	True	False	784.2119129635653	859.6273432340685	604.9268248163571	738.6509949316672	891.0813684194544	655.1461419178263	620.1812175716514	874.3766738326104	675.3808227017669	575.5816209535436	1.3624686480857258	1.493493384674023	1.0509835665256275	1.283312336672552	1.548140760546236	1.1382332549682028	1.0774861374903204	1.5191184742557706	1.173388444166945	1.0	9.168876715517792	-15.346871128225846	0.20487572741744667	5.282372164570174e-15	1.342377523947518	0.22165708279084118	0.17253109711134879	177.21252964996128	2.2436454926754914	73.3901348219982	0.4055502652402487	4.499133415738739e-16	15.346871128225846	1.3423775239475126	
RHS(ph)MREEDFIQPSSR	ddPTM_K562_Methotrexat_30min_R1	2	RHSMREEDFIQPSSR	15	2	Q14289	Q14289	PTK2B	Protein-tyrosine kinase 2-beta	1	RHS(1)MREEDFIQPSSR;RHS(1)MREEDFIQPSSR	80.37100000000001	0.016484	31442000.0	3259.1000000000004	3429.6000000000004	4143.7	3376.4	3429.5	3286.6000000000004	3356.4	4344.6	4094.6	5181.6	True	False	3115.8338663361546	3996.283106767466	3273.9939970109676	3080.3962541991814	3880.539362032885	3921.6889354833443	4109.158139363745	4191.79795545728	3904.242939722234	4243.162029269409	0.734318851093377	0.9418172295097459	0.7715929710972378	0.7259671520791693	0.9145395191757595	0.9242373749650526	0.9684188609859105	0.9878948591974999	0.9201258195634989	1.0	12.050924055056054	-7.931460001068302	5.707621967375134	0.9558884852081014	0.8028062750888384	0.6297467581271823	0.06034472598115891	0.14460787298955818	8.666593450979745	0.019192784567167023	0.021778904993274024	1.1709544433634885e-08	7.931460001068302	-0.15308221011926304	
RHS(ph)PPIEK	ddPTM_K562_Methotrexat_30min_R1	1	RHSPPIEK	8	1	F5GZK9;Q8IZD4-2;Q8IZD4	F5GZK9	DCP1B	mRNA-decapping enzyme 1B	1	RHS(1)PPIEK	80.834	0.022869999999999998	6522700.0	3667.0	2457.6	4538.0	3594.1	2890.6	2464.4	2424.0	3553.4	3704.0	3914.5	True	False	3505.8030707418243	2863.6766279425374	3585.535815439286	3279.010833200236	3270.76456623189	2940.610421896534	2967.6437045101056	3428.4249079137085	3531.8018484665536	3205.5461177194497	1.093667956097287	0.8933506250659929	1.118541329235399	1.0229180029807377	1.0203455031116007	0.917350839422207	0.9257841239923894	1.0695291167274872	1.1017785172216505	1.0	11.646354449371152	-11.892858574779995	4.223549849024986	0.9999997255849336	1.0134593404753656	0.001648882742542157	0.07739930219687226	62036523.290968046	535.1000264374567	171.16179759699983	0.01885135604940388	1.2797979943380427e-12	11.892858574779995	0.013459614890432015	
RHS(ph)VSEMTSCPEPQGFSDPPGQGPTGTFR	ddPTM_K562_Methotrexat_30min_R1	2	RHSVSEMTSCPEPQGFSDPPGQGPTGTFR	29	1	P85299-2;P85299-4;P85299-3;P85299;P85299-5	P85299-2	PRR5	Proline-rich protein 5	1	RHS(0.247)VS(0.247)EMT(0.247)S(0.247)CPEPQGFS(0.01)DPPGQGPTGTFR;RHS(0.405)VS(0.405)EMT(0.094)S(0.094)CPEPQGFS(0.003)DPPGQGPTGTFR	53.995	0.0023515	36769000.0	272.77	405.8	400.15999999999997	458.5	398.36	357.01	185.68	438.04999999999995	514.72	546.79	True	False	260.779357405576	472.8515525793785	316.1718845099572	418.3040168671733	450.7513224258408	425.9971298171083	227.32346660620306	422.6435332108962	490.7907795471667	447.7610324965684	0.5824074416470677	1.0560355150668508	0.7061174634761909	0.9342126413610571	1.006678316584629	0.951393933147528	0.507689258573311	0.9439042313583536	1.0960998030817433	1.0	8.806585169349447	-3.0000008309344004	0.055269836641357734	1.229801792359007	0.1814635655828788	0.11571009712891844	0.1827417991389282	1163.8152548790472	4.84093528926772	19.987658788529217	100.65875770205999	0.0009999980867046667	3.0000008309344004	-1.0483382267761283	
RHTVEDAVVS(ph)QGPEAAGPLSTPQEVSASR	ddPTM_K562_Methotrexat_30min_R1	1	RHTVEDAVVSQGPEAAGPLSTPQEVSASR	29	1	Q96NW4	Q96NW4	ANKRD27	Ankyrin repeat domain-containing protein 27	1	RHT(0.238)VEDAVVS(0.762)QGPEAAGPLSTPQEVSASR	62.993	0.00061236	14435000.0	371.56	647.04	492.21	551.27	594.8	384.38	318.24	391.09	349.21	562.48	True	False	355.226667293382	753.9523622004957	388.90184744763616	502.9410150018904	673.0266256122351	458.65599495560383	389.6134210079601	377.33514302807777	332.975303321546	460.60942145736	0.7712101636337597	1.6368583165646153	0.8443202186728131	1.091903446982465	1.4611655651393123	0.9957590391972975	0.8458650710513697	0.8192084778339881	0.722901633813781	1.0	8.84740011056853	-8.542082120235131	5.022055760139914	0.8389348747128728	1.1721785018312967	0.2615023170179869	0.2480191763544179	0.2381316754328502	16.579238896579806	0.09116133015945765	0.0722457022972199	2.870237800803965e-09	8.542082120235131	0.3332436271184239	
RHVTLPS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	1	RHVTLPSSPR	10	1	Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0	Q5T4S7-3	UBR4	E3 ubiquitin-protein ligase UBR4	1	RHVTLPS(0.5)S(0.5)PR	82.505	0.017696	20958000.0	1103.4	813.27	1395.4	1245.0	1176.8	883.35	1161.8	1314.3	1079.6	1259.5	True	False	1054.8958571738553	947.6490442736109	1102.524609269278	1135.8527829871994	1331.5698268669778	1054.0448856444993	1422.363224381121	1268.075324047668	1029.409631642682	1031.3923451954654	1.022788138857028	0.9188055822675475	1.0689672212569425	1.1012809899921616	1.2910410214598054	1.0219630682296181	1.379070952976251	1.229479091981575	0.9980776340235415	1.0	10.010377527933997	-7.152077125587403	2.26212831086939	1.1692197939379716	0.9732158277419349	0.2299686191941387	0.12325210732207995	0.3892952975262772	3.8770513660874837	0.03540973282418264	0.0747043624017545	7.04567934885355e-08	7.152077125587403	-0.19600396619603666	
RHVTLPSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	3	RHVTLPSSPR	10	1	Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0	Q5T4S7-3	UBR4	E3 ubiquitin-protein ligase UBR4	1	RHVTLPS(0.137)S(0.862)PR;RHVT(0.001)LPS(0.348)S(0.652)PR;RHVTLPS(0.261)S(0.738)PR	86.262	0.013413999999999999	88029000.0	7810.499999999999	6624.9	8042.2	7489.599999999999	6978.2	6701.900000000001	6550.6	7596.5	7162.3	8985.7	True	False	7467.159772028633	7719.552120953981	6354.252123165677	6832.998396354159	7895.955613394921	7996.947324504295	8019.738799820086	7329.326789262811	6829.326236304535	7358.302656786733	1.0147937806202492	1.0490941295862652	0.8635486224944829	0.9286106749158961	1.0730675240861829	1.0867923891562852	1.0898897713079654	0.9960621533422254	0.9281116250370172	1.0	12.845157302161526														
RIDFIPVS(ph)PAPS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	1	RIDFIPVSPAPSPTR	15	1	Q96E09	Q96E09	FAM122A	Protein FAM122A	2	RIDFIPVS(0.991)PAPS(0.625)PT(0.385)R	102.61	0.0036439999999999997	72636000.0	3478.8	2596.7	3792.4	3387.0	2938.2	3114.5	3277.3	3259.8	4013.7	3181.7	True	False	3325.876117397503	3025.7605386468035	2996.427066212419	3090.0669686567426	3324.624800561316	3716.3330461762507	4012.3179508213575	3145.150986327772	3827.103963064314	2605.4632986966344	1.276500850755123	1.1613138209087113	1.1500553731504726	1.1859952010080235	1.2760205842179537	1.426361694687974	1.539963335053882	1.2071369371816185	1.4688765583375507	1.0	11.347324217358517	-7.955655254908608	3.887058873818647	1.3548495199288328	1.1890792222433593	0.1483789539539272	0.14505267070323585	0.3367579245073497	10.816481973314472	0.044950935717444324	0.050224502955397585	1.1075025761176647e-08	7.955655254908608	-0.16577029768547358	
RIDFIPVS(ph)PAPSPT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	RIDFIPVSPAPSPTR	15	1	Q96E09	Q96E09	FAM122A	Protein FAM122A	2	RIDFIPVS(0.911)PAPS(0.331)PT(0.758)R	105.91	0.010227	47039000.0	3086.8	2325.1	3309.8	3199.8	2716.4	2739.5	2684.5	3084.6	3031.4	2821.1	True	False	2951.1079680299567	2709.2832550574494	2615.118211093204	2919.2785020099914	3073.6542128666388	3268.8696034676013	3286.567460708487	2976.112869632075	2890.4708756591554	2310.171452982077	1.2774411025729406	1.1727628490777948	1.132001786152057	1.2636631355831407	1.3304874878005364	1.4149900429459432	1.4226508844034207	1.2882649319341082	1.2511932272074442	1.0	11.173784212142323	-5.882131672823516	18.557721991849167	1.2685384228053733	2.648412298998379	0.0	0.12234307177618471	9964.097295378528	1690347.4090530032	0.03075462753324213	45226.30483370563	1.3118021162174305e-06	5.882131672823516	1.3798738761930056	
RIDFIPVS(ph)PAPSPTR	ddPTM_K562_Methotrexat_30min_R1	1	RIDFIPVSPAPSPTR	15	1	Q96E09	Q96E09	FAM122A	Protein FAM122A	1	RIDFIPVS(0.404)PAPS(0.298)PT(0.298)R	118.19	0.0005886	13323000.0	1557.2	1487.0	2171.4	1936.0	1458.3	1781.8	1610.5	1637.5	1728.3	1610.7	True	False	1488.7473525386324	1732.7014753216768	1715.6528139367272	1766.27388583391	1650.0920109790231	2126.107632582066	1971.6956213339608	1579.908196856165	1647.9517102334637	1318.9866219978844	1.1287054225641875	1.3136611444148945	1.3007355687489899	1.3391143294224732	1.2510301343918178	1.6119250924331787	1.494856421172347	1.1978197280447467	1.2494074486800268	1.0	10.365214216594087	-10.07977861847004	1.5810102087463835	1.00537295470812	1.3455397489436354	0.3750248905363893	0.13001004127516763	0.5370019863676512	2.9302413417208086	0.13170661034817488	0.03830437645370781	8.321878706107168e-11	10.07977861847004	0.3401667942355153	
RIDFIPVSPAPS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	1	RIDFIPVSPAPSPTR	15	1	Q96E09	Q96E09	FAM122A	Protein FAM122A	1	RIDFIPVSPAPS(0.985)PT(0.015)R	173.03	3.3874e-05	63709000.0	2320.5	1867.3	2136.5	2360.7	2159.6	2059.5	2218.9	2189.1	2291.8	2740.7	True	False	2218.4935984882454	2175.839586326944	1688.0778470000093	2153.7410962231993	2443.6252533157085	2457.4692273559117	2716.544808555061	2112.1081122063097	2185.2547182277667	2244.3326720740065	0.9884869681276426	0.9694817588322289	0.7521513490422267	0.959635406560699	1.0887981464252063	1.0949665608552337	1.21040202388743	0.9410851334506007	0.9736768284927897	1.0	11.132070823701106	-7.591004158478705	5.330577768183561	1.0575388580903051	0.901660951196578	0.3481557681351948	0.09184626276200701	0.2257870521738962	12.059793395504778	0.02902122319261358	0.03794835463404378	2.5644594810567526e-08	7.591004158478705	-0.15587790689372716	
RIDFTPVS(ph)PAPS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	2	RIDFTPVSPAPSPTR	15	1	G1UD79;Q7Z309-4;Q7Z309;Q7Z309-2;Q7Z309-3;Q7Z309-5	G1UD79	SPACIA2;FAM122B	Protein FAM122B	2	RIDFTPVS(0.997)PAPS(0.631)PT(0.372)R;RIDFT(0.001)PVS(0.999)PAPS(0.674)PT(0.326)R	142.55	7.0184000000000004e-06	178862000.0	5835.0	5736.5	6726.5	6303.6	6023.4	6617.799999999999	6583.5	6289.3	6661.2	6074.6	True	False	5578.500386631725	6684.359121172018	5314.699573061342	5750.973174970371	6815.582677728207	7896.596189752836	8060.017462311169	6068.101754190828	6351.522265930185	4974.431075922487	1.1214348538535566	1.3437434390288403	1.0684035002084642	1.1561067159632676	1.370123049994071	1.587437049429506	1.6202893032981611	1.2198584444283458	1.2768339070317347	1.0	12.28031581918674	-7.775777302163835	10.283101032590483	1.3826808185959456	1.1771933938945638	0.16383087873738733	0.18050631558058763	0.4327527339182967	292.63361707365453	0.05662141990818801	0.0659643392340703	1.6758019746824608e-08	7.775777302163835	-0.20548742470138182	
RIDFTPVS(ph)PAPSPT(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	RIDFTPVSPAPSPTR	15	1	G1UD79;Q7Z309-4;Q7Z309;Q7Z309-2;Q7Z309-3;Q7Z309-5	G1UD79	SPACIA2;FAM122B	Protein FAM122B	2	RIDFT(0.274)PVS(0.726)PAPS(0.021)PT(0.979)R;RIDFT(0.008)PVS(0.992)PAPS(0.401)PT(0.599)R	145.82	5.6791999999999997e-08	202666000.0	3301.3	3175.7	3601.7	3235.8	3168.9	3114.1	2892.1000000000004	3695.3	3702.3	3688.7	True	False	3156.1788048650046	3700.4304473295547	2845.7523901427235	2952.1224379036	3585.6658942545596	3715.8557518373627	3540.7270453026704	3565.33420448402	3530.1808810954994	3020.6406857661864	1.0448706526855374	1.2250482041000978	0.9421022512053259	0.9773166506743232	1.1870547566782357	1.2301548374645013	1.1721774992925265	1.1803238370205797	1.1686861326242344	1.0	11.560638866048862	-7.780283666642325	24.975897704789745	1.169892394135779	1.0525116851430913	0.2534046570741959	0.08976459094155693	317.51606243496065	420828.32304888085	0.028082941866454565	0.031894283719746355	1.6585032746645844e-08	7.780283666642325	-0.11738070899268771	
RIDFTPVS(ph)PAPSPTR	ddPTM_K562_Methotrexat_30min_R1	3	RIDFTPVSPAPSPTR	15	1	G1UD79;Q7Z309-4;Q7Z309;Q7Z309-2;Q7Z309-3;Q7Z309-5	G1UD79	SPACIA2;FAM122B	Protein FAM122B	1	RIDFTPVS(0.583)PAPS(0.341)PT(0.076)R;RIDFT(0.004)PVS(0.996)PAPSPTR;RIDFT(0.434)PVS(0.566)PAPSPTR	166.9	8.1782e-06	83934000.0	4503.5	4112.04	5168.9	4390.6	4050.7999999999997	4051.32	4206.7	4157.5	4224.0	4801.5	True	False	4305.531532338639	4791.484717270847	4084.0185271979167	4005.682914846264	4583.5512021352415	4834.180252571769	5150.159559308029	4011.278368506565	4027.627161966182	3931.9018225137156	1.095025187985507	1.2186175885255417	1.0386878186564055	1.0187647341319879	1.165733888849981	1.2294763376063178	1.3098393072326169	1.0201878250210488	1.0243458112062596	1.0	11.941011583466492	-9.464913987677905	24.996609736993545	1.0155364345000157	1.1510622796780583	0.36730855385233874	0.08350310560087426	311.5893569173038	134369.36967299358	0.05003809530086125	0.02403741492186928	3.4283567866613395e-10	9.464913987677905	0.13552584517804256	
RIDFTPVSPAPS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	1	RIDFTPVSPAPSPTR	15	1	G1UD79;Q7Z309-4;Q7Z309;Q7Z309-2;Q7Z309-3;Q7Z309-5	G1UD79	SPACIA2;FAM122B	Protein FAM122B	1	RIDFTPVSPAPS(0.845)PT(0.155)R	90.581	0.010718	0.0	1154.7	821.02	1082.1	961.13	755.87	917.95	623.21	858.17	969.85	1091.3	True	False	1103.9407705987403	956.6796000461352	854.9819977714534	876.8692251505921	855.2801538357777	1095.330845958417	762.9807067193659	827.9876746846131	924.7618851877127	893.6549950867895	1.2353097970336173	1.070524537216093	0.9567249133860878	0.9812167223050465	0.9570585500422509	1.2256752907782285	0.8537754624705781	0.9265182640244751	1.0348086121287803	1.0	9.803574161067782	-6.3480075416064174	2.6955783143136585	0.9913888831344999	1.2600125865640024	0.39663558762858886	0.09108329381729456	0.37908060352975587	4.115031399852467	0.023825062239401285	0.20629560575874858	4.487375974516028e-07	6.3480075416064174	0.2686237034295025	
RIDIS(ph)PSTFR	ddPTM_K562_Methotrexat_30min_R1	3	RIDISPSTFR	10	1	Q9Y2W1;A0A3B3ITZ9	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	1	RIDIS(0.826)PS(0.165)T(0.009)FR;RIDIS(0.91)PS(0.087)T(0.002)FR;RIDIS(0.986)PS(0.007)T(0.007)FR	91.961	0.010705	1100883000.0	7688.1	7232.5	8041.9	7562.2	7132.2	7699.9	7406.7	8075.9	7964.3	8187.0	True	False	7350.140329471014	8427.547693519855	6354.0150890659315	6899.233667072933	8070.2093126960035	9187.79670003292	9067.841017407178	7791.866019536305	7594.041431355884	6704.254966347975	1.0963396181029903	1.2570446284966714	0.9477585683957318	1.0290828289949672	1.2037443911671677	1.370442613855095	1.3525501435913803	1.1622269825129856	1.1327196637768395	1.0	12.710861301195052	-7.872199427949195	6.388145599228911	1.2296103936979692	1.0860348616145874	0.17071985800670686	0.12387800340868384	0.3387276696141655	17.80484514130306	0.040052840082666526	0.045638084008141004	1.3421485052545031e-08	7.872199427949195	-0.1435755320833818	
RIEQHYFEDR	ddPTM_K562_Methotrexat_30min_R1	4	RIEQHYFEDR	10	1	C9JNK6;O75431-2;O75431	C9JNK6	MTX2	Metaxin-2	0	;;;	125.74	0.00085659	180493000.0	14685.2	13927.7	14786.900000000001	16144.3	15191.5	14447.599999999999	13013.5	16329.400000000001	16415.5	17199.0	False	True	14039.656191561986	16229.015694578151	11683.331764944738	14728.954284642763	17189.448525535096	17239.39422634003	15932.108642179144	15755.085746407967	15652.346987986692	14084.094438282487	0.9968447920514001	1.1522938706279529	0.8295408566125381	1.045786390398481	1.2204865993238325	1.2240328479679183	1.1312128523416813	1.1186438585347382	1.1113491929904618	1.0	13.781779185619524	-7.551895363597205	10.628435331294703	1.143608716958776	0.9970026733562314	0.3201127227251582	0.09326242890757212	0.5314471870671562	190.64129023828048	0.027398896716988835	0.035488294625014516	2.80610964435384e-08	7.551895363597205	-0.1466060436025447	
RIEYIEAR	ddPTM_K562_Methotrexat_30min_R1	1	RIEYIEAR	8	1	Q8WUW1;Q8WUW1-2	Q8WUW1	BRK1	Protein BRICK1	0		93.598	0.023030000000000002	4161000.0	2932.3	3031.5	3819.6	2939.7	2565.1	2839.3	3090.1	3288.1	3160.2	3471.2	False	True	2803.399603036883	3532.403848310465	3017.918157922411	2681.9810651786906	2902.4556108909633	3387.9545410204646	3783.1335855225543	3172.4556592871795	3013.282991772139	2842.532043384279	0.9862332456591042	1.242696228009741	1.0617006640070519	0.9435183224832046	1.0210810525939895	1.1918791026140247	1.3309027049765139	1.1160668062373356	1.0600700170769461	1.0	11.472960897129136	-8.262229393600819	24.993303208891668	1.1589828385145187	1.0563113191434015	0.1274732332202324	0.11008289205268165	140.55104928035507	4446493.250794634	0.03946818173804847	0.036832493711169076	5.467271062936309e-09	8.262229393600819	-0.10267151937111718	
RIIDS(ph)ARS(ph)AYQEAMDIS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	RIIDSARSAYQEAMDISK	18	2	P31947-2;P31947	P31947-2	SFN	14-3-3 protein sigma	3	RIIDS(0.894)ARS(0.768)AY(0.341)QEAMDIS(0.997)K	43.091	0.033368	0.0	876.63	351.64	961.26	837.82	458.82	527.34	788.65	671.13	721.52	946.46	True	False	838.0943948471236	409.74253314197307	759.5046623951456	764.369621399466	519.1628721644349	629.2409916746138	965.5248381030914	647.5259774998949	687.9766926850946	775.0469226150856	1.081346651915357	0.528668034393919	0.9799466848181284	0.986223671233229	0.6698470208909774	0.8118747050197839	1.2457630756668439	0.8354668067258144	0.8876581179934147	1.0	9.598139845935618														
RILS(ph)DVTHSAVFGVPASK	ddPTM_K562_Methotrexat_30min_R1	1	RILSDVTHSAVFGVPASK	18	1	E9PG46;Q2M2I8-2;Q2M2I8	E9PG46	AAK1	AP2-associated protein kinase 1	1	RILS(0.47)DVT(0.45)HS(0.08)AVFGVPASK	75.054	0.011685	13622000.0	4682.3	3704.0	6247.7	4970.4	3938.8	3725.0	3688.7	4913.3	5161.6	6722.1	True	False	4476.471698427715	4316.023042764953	4936.3931498721995	4534.652749043838	4456.821239007184	4444.803530905934	4515.9848732782275	4740.496454115048	4921.638342614735	5504.662551519203	0.8132145533956985	0.784066780183246	0.89676580601836	0.8237839661565346	0.8096447688291392	0.8074615817602182	0.8203926818423928	0.861178393724924	0.894085386079922	1.0	12.426438410636734	-10.075974730551343	1.2734758351128979	0.9993169144613084	0.8224018869979002	0.7926613111673902	0.027864182448186777	0.24414508942796262	0.8681638205943547	0.027428838338946108	0.008412164568447447	8.395088319665677e-11	10.075974730551343	-0.17691502746340826	
RIPLAEWESR	ddPTM_K562_Methotrexat_30min_R1	1	RIPLAEWESR	10	1	P31930	P31930	UQCRC1	Cytochrome b-c1 complex subunit 1, mitochondrial	0		125.97	0.0029914	20071000.0	1505.6	1070.0	1726.5	1529.0	1129.8	1199.6	1289.2	1452.0	1362.3	1666.9	False	True	1439.4156267545372	1246.7993131097476	1364.131244018495	1394.954943925645	1278.3885030543092	1431.4057223287955	1578.3359174316945	1400.9323369985655	1298.9669703471886	1365.0082574087503	1.0545105635383023	0.9134005646798039	0.9993575032345078	1.0219388317648304	0.9365426883798675	1.048642537185885	1.156283054600646	1.026317847818746	0.9516183973956828	1.0	10.414693963196681	-8.293967740669297	24.313257488115948	1.0456991696658293	0.9839970723039612	0.1418381940654948	0.06118509599391808	825.5892835263253	617081.6389345428	0.022003568246684056	0.019407137628766412	5.0819718997167475e-09	8.293967740669297	-0.06170209736186816	
RIPSIVS(ph)S(ph)PLNSPLDR	ddPTM_K562_Methotrexat_30min_R1	1	RIPSIVSSPLNSPLDR	16	1	P49790-2;P49790;P49790-3	P49790-2	NUP153	Nuclear pore complex protein Nup153	2	RIPS(0.022)IVS(0.923)S(0.935)PLNS(0.119)PLDR	102.72	0.004234300000000001	39913000.0	2110.4	1802.3	2459.2	2145.4	1988.7	1805.9	2264.4	2230.6	2405.9	2073.6	True	False	2017.6293429216091	2100.0994411380334	1943.0475269564329	1957.3161129483844	2250.2489077926234	2154.8646165001414	2772.2493417874084	2152.1485336838846	2294.050234132206	1698.0509464051738	1.1882030672831063	1.2367705725108005	1.1442810541520703	1.1526839739950576	1.3251951671747362	1.2690223582879279	1.6326066939607116	1.2674228286495464	1.3509902273478784	1.0	10.729664029197018	-7.774332866837896	17.65816046048358	1.3352401383707395	1.1819192665135658	0.13674443948177695	0.14678735074021196	11.078693147298994	15171.484029507059	0.04397687351385154	0.05056495018596524	1.6813848625562732e-08	7.774332866837896	-0.1533208718571737	
RIPSIVSS(ph)PLNS(ph)PLDR	ddPTM_K562_Methotrexat_30min_R1	1	RIPSIVSSPLNSPLDR	16	1	P49790-2;P49790;P49790-3	P49790-2	NUP153	Nuclear pore complex protein Nup153	2	RIPSIVS(0.044)S(0.956)PLNS(1)PLDR	114.19	0.0014574000000000002	20010000.0	2305.0	2344.6	3183.9	2679.1	2211.9	2198.5	2352.0	3157.8	2712.0	2750.0	True	False	2203.67495992907	2732.0052986141236	2515.6429005679056	2444.2274625710884	2502.803620026401	2623.329010119919	2879.4958717028717	3046.738384141923	2585.919711944195	2251.9483519551623	0.9785637215062323	1.2131740482601083	1.117096179574368	1.085383446049723	1.1113947697128328	1.1649152645274128	1.278668700018305	1.3529343963402698	1.148303294655526	1.0	11.136958024499139	-8.485606865706394	3.9062026488331942	1.2246541713781582	1.1083601047978762	0.13279974058628052	0.10215931300948095	0.34814349000026723	11.350224558211293	0.03743862172158269	0.0310450526850609	3.2688360154501734e-09	8.485606865706394	-0.11629406658028207	
RIPSIVSS(ph)PLNSPLDR	ddPTM_K562_Methotrexat_30min_R1	1	RIPSIVSSPLNSPLDR	16	1	P49790-2;P49790;P49790-3	P49790-2	NUP153	Nuclear pore complex protein Nup153	1	RIPS(0.141)IVS(0.4)S(0.449)PLNS(0.01)PLDR	132.52	3.7438e-05	148690000.0	1717.9	1382.9	1389.3	1506.7	1443.5	1422.3	1486.5	1673.8	1392.3	2254.4	True	False	1642.3831729553804	1611.4007197191304	1097.704915907846	1374.6099503026608	1633.3455515656726	1697.139345505373	1819.8854648326192	1614.931505281128	1327.5722768952444	1846.106314417353	0.8896471238568568	0.8728645295965538	0.5946054717083242	0.7445995604735796	0.884751619562696	0.9193074809675871	0.9857966741243669	0.8747770876840396	0.7191201647096027	1.0	10.85026992262203	-7.801942306834098	7.295187829942209	0.8970835245505303	0.7695168815085721	0.24828964106203122	0.10371749135767247	0.3116690211728488	44.57638205897806	0.03399581130031666	0.039049386418536974	1.5778208589027645e-08	7.801942306834098	-0.1275666430419582	
RIPSIVSSPLNS(ph)PLDR	ddPTM_K562_Methotrexat_30min_R1	2	RIPSIVSSPLNSPLDR	16	1	P49790-2;P49790;P49790-3	P49790-2	NUP153	Nuclear pore complex protein Nup153	1	RIPSIVSSPLNS(1)PLDR;RIPSIVSS(0.004)PLNS(0.996)PLDR	104.97	0.00078869	46909000.0	4309.3	3007.1	3555.5	3416.2	2969.7	2587.2	2619.79	3554.3	3338.1	3932.2	True	False	4119.868331810125	3503.972163039551	2809.249138782368	3116.7070499926685	3360.267602691081	3087.1397839355286	3207.344595972988	3429.2932544035816	3182.9124596021065	3220.0404762029443	1.2794461318909423	1.0881764340960762	0.8724266541192739	0.9679092772361277	1.043548249633648	0.9587270118964059	0.9960572296144155	1.0649845179733228	0.988469705000535	1.0	11.652863107924416	-6.376197642163923	3.4049469499906655	0.9890788425010846	1.2865752379729822	0.7584520552812828	0.05021584237267211	0.12548793967298422	2.3525082057910858	0.013258519358367011	0.0789364663342763	4.2053520434717694e-07	6.376197642163923	0.29749639547189766	
RIQPQPPDEDGDHS(ph)DKEDEQPQVVVLK	ddPTM_K562_Methotrexat_30min_R1	2	RIQPQPPDEDGDHSDKEDEQPQVVVLK	27	2	Q96AT1	Q96AT1	KIAA1143	Uncharacterized protein KIAA1143	1	RIQPQPPDEDGDHS(1)DKEDEQPQVVVLK;RIQPQPPDEDGDHS(1)DKEDEQPQVVVLK	64.68	0.00055376	37308000.0	5686.4	3640.8	8734.599999999999	6088.6	4126.5	3395.6	3154.6	4896.3	5229.9	7012.6	True	False	5436.43266470311	4242.380316981277	6901.326825371533	5554.821891161332	4669.207078999475	4051.751642830657	3862.0993524123655	4724.094353750739	4986.7630905224705	5742.550186516645	0.9466931046536972	0.7387624277002007	1.201787812246842	0.967309246021725	0.8130894685017553	0.7055666056422218	0.6725408097399779	0.8226474650309172	0.868388247129517	1.0	12.487475844627898	-7.789754095914949	5.67598913963046	0.791105001834397	0.965066942061837	0.2216000813285781	0.13407429414302496	0.24737119319590686	22.33281905037935	0.04231993731879642	0.049738726497259064	1.6227286507186754e-08	7.789754095914949	0.17396194022743994	
RIS(ph)FSASHR	ddPTM_K562_Methotrexat_30min_R1	2	RISFSASHR	9	1	E9PKY8;E9PJM0;Q03393	E9PKY8	PTS	6-pyruvoyl tetrahydrobiopterin synthase	1	RIS(0.993)FS(0.007)ASHR;RIS(0.999)FS(0.001)ASHR	100.09	0.005564	39632000.0	3224.4	2856.1	3695.8999999999996	3112.2	2932.1000000000004	2416.5	3086.1	3444.9	3050.9	3964.7999999999997	True	False	3082.6592367875464	3328.021979600701	2920.1810974618897	2839.358258002219	3317.722543640948	2883.454424814548	3778.2364836999304	3323.7409144120916	2909.0643249153914	3246.7363003024834	0.9494640006644055	1.02503611990005	0.8994204725495661	0.8745269080638576	1.0218638770669028	0.8881085983317801	1.1637029109348762	1.0237175449396472	0.8959964887337377	1.0	11.664774498452994														
RIS(ph)GLIYEETR	ddPTM_K562_Methotrexat_30min_R1	3	RISGLIYEETR	11	1	P62805	P62805	HIST1H4A	Histone H4	1	RIS(1)GLIYEETR;RIS(1)GLIYEETR;RIS(1)GLIYEETR	95.822	0.011027	42270000.0	4465.0	4156.1	4887.8	4404.1	4541.7	4286.6	4357.1	5045.6	4626.5	4593.4	True	False	4268.72394624004	4842.824883378895	3861.9175757391286	4017.999390806366	5139.013156595643	5114.924782706414	5334.290587838689	4868.143388126694	4411.415024819252	3761.4907490439427	1.1348489817036027	1.2874748886753993	1.0266986770393391	1.0681933464352187	1.3662171461944508	1.3598132027857501	1.4181320502235728	1.294205864885891	1.1727836964481437	1.0	11.877088826888416	-7.760182714351603	24.99993758620185	1.295280352428663	1.1332729415386917	0.20267310296991858	0.12878677289547652	46.83074852908687	931627.5880421693	0.03878709426407637	0.04731629331897139	1.7370698630539214e-08	7.760182714351603	-0.16200741088997117	
RIS(ph)QSQPVR	ddPTM_K562_Methotrexat_30min_R1	3	RISQSQPVR	9	1	E7EMW7;O95071-2;O95071	E7EMW7	UBR5	E3 ubiquitin-protein ligase UBR5	1	RIS(0.5)QS(0.5)QPVR;RIS(0.5)QS(0.5)QPVR;RIS(0.5)QS(0.5)QPVR	99.539	0.0056936999999999995	44748500.0	3273.8	3025.5200000000004	3288.5299999999997	3630.54	3319.1800000000003	2724.54	3107.51	2950.45	3208.29	3106.76	True	False	3129.8876719374375	3525.4357549530837	2598.3124934214557	3312.256194976987	3755.7103483517467	3251.0187951931453	3804.448221205526	2846.6810011690204	3059.137298168673	2544.0956588800823	1.2302554980637883	1.3857323888933446	1.0213108474723154	1.3019385428435701	1.4762457281205457	1.277868142986515	1.495402976663328	1.1189363069870324	1.20244586224219	1.0	11.312937202138652	-11.654611939792245	7.842597216257331	1.0000000004212735	1.2825834048619478	0.26084524019398225	0.1407259006061066	0.0	0.0	0.13787253209507563	0.03343900074702106	2.2150730856521604e-12	11.654611939792245	0.2825834044406743	
RIS(ph)QVSSGETEYNPTEAR	ddPTM_K562_Methotrexat_30min_R1	3	RISQVSSGETEYNPTEAR	18	1	H0Y764;A0A494C1V1;Q6ZNJ1-2;Q6ZNJ1-3;Q6ZNJ1;H7C3Y7	H0Y764	NBEAL2	Neurobeachin-like protein 2	1	RIS(1)QVSSGETEYNPTEAR;RIS(0.998)QVS(0.002)S(0.001)GETEYNPTEAR;RIS(1)QVSSGETEYNPTEAR	155.2	1.0381999999999999e-14	168463000.0	2952.56	2696.69	3146.31	3273.51	2366.81	2631.7299999999996	2964.9	3306.2699999999995	3406.6000000000004	3636.7	True	False	2822.7689976955194	3142.2721866074053	2485.9425278701606	2986.5264607521494	2678.0870002778997	3140.2745762123677	3629.8542984744277	3189.9866100883237	3248.227909553502	2978.0583896564895	0.9478554911816613	1.0551412280972292	0.8347527827205923	1.0028434872617245	0.8992728314459978	1.0544704519962718	1.21886606088107	1.0711632186823172	1.0907200210833259	1.0	11.540156325231541	-8.454489086351284	5.73657758079523	1.105903898297848	0.9519248118495827	0.4699573612040182	0.07435943614205356	0.18404464189051242	11.440358662769363	0.025773725865783297	0.022384145797310344	3.5116474903679024e-09	8.454489086351284	-0.1539790864482653	
RIS(ph)SSSVQPCSEEVSTPQDSLAQCK	ddPTM_K562_Methotrexat_30min_R1	1	RISSSSVQPCSEEVSTPQDSLAQCK	25	1	J3QS41;P42694	J3QS41	HELZ	Probable helicase with zinc finger domain	1	RIS(0.199)S(0.199)S(0.199)S(0.199)VQPCS(0.199)EEVS(0.002)T(0.001)PQDSLAQCK	62.442	0.0034189	67560000.0	2340.7	1364.3	2457.2	1727.9	1567.7	1938.7	1688.6	2007.6	2013.0	2594.5	True	False	2237.8056306750423	1589.727385865072	1941.4672996248162	1576.417689737816	1773.8800285344678	2313.326337011367	2067.311534420693	1936.9915700814868	1919.4160693745068	2124.610908780972	1.0532778596900916	0.7482440099007128	0.9137989886057598	0.7419794764408463	0.8349199475551308	1.0888235240864284	0.9730306504012279	0.9116923772140779	0.9034200386723051	1.0	11.052982941738504	-8.215054575933348	24.957804013653156	0.969726532870817	0.8489268080148276	0.2703780769935755	0.09519176680942328	549.7712384082355	295810.08024313534	0.03077598125354885	0.030775887099109143	6.094603041533367e-09	8.215054575933348	-0.12079972485598944	
RIS(ph)TSDILSEK	ddPTM_K562_Methotrexat_30min_R1	5	RISTSDILSEK	11	1	O60293-2;O60293	O60293-2	ZFC3H1	Zinc finger C3H1 domain-containing protein	1	RIS(0.815)T(0.176)S(0.009)DILSEK;RIS(0.994)T(0.006)SDILSEK;RIS(0.926)T(0.073)S(0.001)DILSEK;RIS(0.876)T(0.121)S(0.002)DILSEK;RIS(0.956)T(0.03)S(0.015)DILSEK	119.62	0.0018081	50945700.0	10913.0	8465.17	12831.5	10730.999999999998	7618.49	7440.8099999999995	6749.18	8743.16	9018.59	11053.199999999999	True	False	10433.277586857243	9863.895459212368	10138.343502822661	9790.229890952314	8620.454971352658	8878.641224375891	8262.855419804253	8435.65810712974	8599.317719374187	9051.358372302118	1.152675339735073	1.0897696294289572	1.1200908290016232	1.0816310092097559	0.952393510098102	0.9809180963981323	0.9128856774790016	0.9319770315297127	0.9500582526583842	1.0	13.143918603921515	-7.696871716228104	3.184790606619445	0.9489029929801586	1.116583178634601	0.8891654384391722	0.027214376646637877	0.07329660185396962	1.5024790929822964	0.008406994382800884	0.010868154958058603	2.0096863547417023e-08	7.696871716228104	0.16768018565444243	
RISGKSTFHSEMEGEDTR	ddPTM_K562_Methotrexat_30min_R1	1	RISGKSTFHSEMEGEDTR	18	2	P51508	P51508	ZNF81	Zinc finger protein 81	0		45.883	0.033559	17782000.0	1458.0	1653.2	1538.3	1951.4	1198.6	1449.4	1576.9	1857.5	1495.4	1549.8	False	True	1393.9080657599059	1926.3632004047054	1215.4318521133227	1780.323791743952	1356.2369089758326	1729.476036965118	1930.559966023921	1792.1706721589778	1425.8791803987278	1269.1162021309501	1.09832973798571	1.517877714562452	0.9576994211188172	1.4028059753351525	1.0686467533064345	1.362740491423233	1.5211845556635024	1.4121407237176362	1.1235213749572812	1.0	10.30960845515155														
RISGLIYEETR	ddPTM_K562_Methotrexat_30min_R1	2	RISGLIYEETR	11	1	P62805	P62805	HIST1H4A	Histone H4	0	;	134.99	0.00030437	15436100.0	2724.1000000000004	2657.92	3103.8	2920.5	2857.6	2822.0	2700.1000000000004	3568.0	3226.6000000000004	3181.5	False	True	2604.351825745241	3097.0961030847293	2452.354795936638	2664.464299368768	3233.4244878102295	3367.3115608635044	3305.6661578167223	3442.511417638348	3076.596070265168	2605.299520634674	0.99963624340237	1.1887677706746935	0.941294763428668	1.0227093960849771	1.2410951071846583	1.2924853876467906	1.2688238460242116	1.3213495762666558	1.180899181033773	1.0	11.347233527451467	-7.764609307141372	24.95962578419903	1.2398309326174584	1.0419490573402763	0.41358507002913947	0.10251798067624367	69.94542160978921	550741.7138802487	0.030057562558959958	0.035526399121933526	1.719454518993631e-08	7.764609307141372	-0.19788187527718204	
RIT(ph)SPLMEPSSIEK	ddPTM_K562_Methotrexat_30min_R1	2	RITSPLMEPSSIEK	14	1	P28066	P28066	PSMA5	Proteasome subunit alpha type-5	1	RIT(0.5)S(0.5)PLMEPSSIEK;RIT(0.5)S(0.5)PLMEPSSIEK	77.505	0.017516	27241000.0	5506.1	4680.4	8085.7	7027.7	4944.5	4927.0	4765.9	5719.299999999999	6346.7	7839.2	True	False	5264.058436817985	5453.756546802674	6388.622067628352	6411.592452208149	5594.788416845488	5879.073019268064	5834.774394110853	5518.148977269897	6051.643302284741	6419.444916598879	0.8200176970452088	0.8495682442419271	0.9951985180384011	0.9987767689429928	0.8715377247616751	0.9158226444262236	0.908921950404741	0.8595990851173932	0.9427050751127865	1.0	12.648232838911225	-6.596168440078184	7.600840810490265	0.9296065896887258	0.8272620340479937	0.41680709439818797	0.04813365246349015	0.2134853961714662	18.57176261442442	0.012856608668210777	0.03445190056344922	2.534145577559385e-07	6.596168440078184	-0.10234455564073208	
RKDPLTHTS(ph)NSLPR	ddPTM_K562_Methotrexat_30min_R1	1	RKDPLTHTSNSLPR	14	2	A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5	A0A2R8Y7K2	SPAST	Spastin	1	RKDPLTHT(0.032)S(0.484)NS(0.484)LPR	77.13	0.023555	21713000.0	3375.5	2443.9	4096.8	3025.2	2879.9	2502.1	2344.6	3345.5	3186.4	4304.4	True	False	3227.1170617095754	2847.712935802722	3236.937666084548	2759.985412926005	3258.657328683049	2985.5954133368427	2870.436233331019	3227.836868752549	3038.2649594907753	3524.831449511204	0.9155379790307666	0.8079004561190068	0.9183240993079034	0.7830120255278414	0.9244860003546933	0.8470179230132725	0.8143470899095242	0.9157421893748026	0.8619603527176024	1.0	11.783338556991074	-10.923079935952773	0.8283966494505572	1.0025211826409273	0.8605167337119973	0.4009404829659283	0.049379751403055144	4.614547900430754	3.3804394676213323	0.08019507979869873	0.015182739063339657	1.193768360033486e-11	10.923079935952773	-0.14200444892892994	
RKDPLTHTSNS(ph)LPR	ddPTM_K562_Methotrexat_30min_R1	1	RKDPLTHTSNSLPR	14	2	A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8Y5N9;A0A2R8YFW8;A0A2R8YCL5	A0A2R8Y7K2	SPAST	Spastin	1	RKDPLTHT(0.001)S(0.014)NS(0.985)LPR	115.66	0.00084164	23863000.0	6301.6	4742.0	8823.1	6235.6	5167.0	5272.2	4435.5	6606.9	6589.4	8748.3	True	False	6024.58920932279	5525.534899781704	6971.251884795589	5688.934629393558	5846.551066809721	6290.978033729471	5430.273783562117	6374.531582173428	6283.060232258506	7163.898097239767	0.8409652297600451	0.7713028332871847	0.973108744732368	0.7941116068618412	0.8161130975693783	0.8781501283712243	0.758005447572515	0.8898132686490223	0.8770448918975209	1.0	12.806529100538105	-10.203499687375773	1.4218983066041422	0.9991681464214233	0.8367313306978945	0.40287766677591197	0.059255329573122205	0.7423714325711397	2.8560583420963805	0.05457318896546844	0.016129006980040803	6.258933144667534e-11	10.203499687375773	-0.16243681572352875	
RKEDEVEEWQHR	ddPTM_K562_Methotrexat_30min_R1	4	RKEDEVEEWQHR	12	2	E7EQR4;P15311	E7EQR4	EZR	Ezrin	0	;;;	84.821	0.0094603	144166000.0	25198.3	20337.7	35882.7	29301.8	21225.800000000003	19070.8	19052.0	23830.7	24542.7	31231.1	False	True	24090.612903592475	23698.15924320756	28351.41163610914	26732.956687979367	24017.364744317743	22755.962195221735	23324.89598115781	22992.56077363067	23401.715233898507	25574.845154453433	0.9419651520117804	0.926619852440472	1.10856630665356	1.0452832275828763	0.9391010815225022	0.8897790800996956	0.9120249151184467	0.8990303024230393	0.9150286186512253	1.0	14.642437884600076	-7.914262775587778	5.901673747931494	0.9159797307246178	1.0068312342058279	0.3319664009700044	0.05527896207247166	0.23848942818976365	12.982018472261695	0.01827723899801032	0.020788834195495657	1.218252256328749e-08	7.914262775587778	0.09085150348121007	
RKELSQNT(ph)DESGLNDEAIAK	ddPTM_K562_Methotrexat_30min_R1	1	RKELSQNTDESGLNDEAIAK	20	2	A0A1W2PP02;P35251-2;P35251	A0A1W2PP02	RFC1	Replication factor C subunit 1	1	RKELS(0.116)QNT(0.685)DES(0.199)GLNDEAIAK	68.525	0.012341	10718000.0	1126.8	580.18	1421.7	987.23	492.76	553.08	467.2	769.04	746.7	1327.6	True	False	1077.267221192224	676.0448836261799	1123.3045986800432	900.6810786734566	557.5665770623489	659.9548823821358	571.9814928824752	741.9924273039785	711.9860799810953	1087.1587752929725	0.9909014632217977	0.6218455840951072	1.0332479709574436	0.8284724358047305	0.5128658202773494	0.6070455368437679	0.5261250756388689	0.6825060369898803	0.6549053332060223	1.0	10.086346940390692	-7.628526464062949	7.11449849687624	0.6389718228468518	0.8679178503001922	0.2702155720810673	0.1628853182818417	0.26540718963249293	15.940313918635164	0.045594243438983294	0.058936613787932475	2.3521961561687834e-08	7.628526464062949	0.22894602745334036	
RKPNAGGS(ph)PAPVR	ddPTM_K562_Methotrexat_30min_R1	1	RKPNAGGSPAPVR	13	2	Q3KQU3-4;Q3KQU3;Q3KQU3-2	Q3KQU3-4	MAP7D1	MAP7 domain-containing protein 1	1	RKPNAGGS(1)PAPVR	68.97800000000001	0.032901	9143200.0	3739.4	3398.8	5826.2	3970.6	3015.5	3164.2	3080.1	4279.6	4132.8	5115.2	True	False	3575.0204534311324	3960.3939302779513	4603.360239733889	3622.503662754194	3412.091105470237	3775.6368677832384	3770.8908309659932	4129.084042299627	3940.667030060092	4188.787712698562	0.8534737729948076	0.9454749683952182	1.0989719593042457	0.8648095609553943	0.814577233199543	0.9013674425030345	0.900234408999604	0.9857467901230851	0.9407655150710366	1.0	12.032317055092912	-9.261665719930312	24.993745587246416	0.972442115980015	0.9139203535468974	0.13839260136596898	0.07311582938664384	51.19210831860494	5652120.6006333	0.04033484937830502	0.02128325492934233	5.474371677053953e-10	9.261665719930312	-0.058521762433117575	
RKS(ph)HEAEVLK	ddPTM_K562_Methotrexat_30min_R1	4	RKSHEAEVLK	10	2	A2A2D0;P16949;P16949-2	A2A2D0	STMN1	Stathmin	1	RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK	90.15	0.0085933	113747000.0	16421.8	11171.3	27135.4	17090.8	11059.2	10048.9	8856.9	13599.4	12975.2	22116.0	True	False	15699.917334908108	13017.167445367217	21440.050367181844	15592.476099178824	12513.67864487363	11990.707705159904	10843.28528319948	13121.101393786703	12371.985784077548	18110.578091578336	0.8668921144051598	0.7187604602980827	1.1838413030642991	0.860959601639085	0.6909596469862361	0.6620831010764778	0.5987266242065323	0.7244993134641126	0.6831358845375946	1.0	14.144544977551625	-7.674205492009747	4.804378863200938	0.7032878670033987	0.9198939745089207	0.26436642821779877	0.1467864054420421	0.25307545493344735	10.169435176460912	0.04336191101046181	0.055999694345974495	2.11735904257625e-08	7.674205492009747	0.216606107505522	
RKS(ph)LSDSESDDSK	ddPTM_K562_Methotrexat_30min_R1	2	RKSLSDSESDDSK	13	2	Q13185;S4R2Y4	Q13185	CBX3	Chromobox protein homolog 3	1	RKS(0.987)LS(0.011)DS(0.001)ESDDSK;RKS(0.997)LS(0.003)DSESDDSK	117.07	0.0045403	50660000.0	13242.7	8390.5	22928.1	13006.9	9045.0	7146.3	6150.5	10704.0	10614.0	16630.5	True	False	12660.56676436125	9776.887510885357	18115.80514102547	11866.605271515024	10234.576040118814	8527.22133501023	7529.906190012128	10327.534252915044	10120.557456701943	13618.555297160134	0.9296556417405999	0.7179093007702604	1.3302295835155984	0.8713556623726129	0.7515170160709354	0.6261472783965862	0.552915197369161	0.7583428658595407	0.7431447195292715	1.0	13.733286045001362	-7.670558833663962	3.8265654565719727	0.7104249080282883	0.9825005094605891	0.28051980232349816	0.1780195665310593	0.2714050467154088	7.586285568775972	0.05427999264615098	0.07049236094765253	2.1352128102044705e-08	7.670558833663962	0.2720756014323008	
RKSEPLQSVVDHMAT(ph)HLGVSPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	RKSEPLQSVVDHMATHLGVSPSR	23	2	H3BSZ7	H3BSZ7	NFATC2IP		2	RKSEPLQSVVDHMAT(0.672)HLGVS(0.331)PS(0.997)R	73.212	0.0012099	92723000.0	1036.1	1314.7	1195.6	1472.7	1266.9	1453.1	1302.3	1296.5	1283.2	1385.8	True	False	990.5542845911101	1531.9318289209207	944.6598988407259	1343.5906775142562	1433.519556133392	1733.8910095998438	1594.3739259007884	1250.9013601368038	1223.54431208215	1134.8181913234419	0.8728748729661365	1.349935910997654	0.8324328126420404	1.1839699854893415	1.2632151714642503	1.5279020224180178	1.4049597883528866	1.1022923052352411	1.0781853176456702	1.0	10.14824546721266	-6.244281720756997	23.81884893592762	1.2044828698459036	0.872874357011542	0.19562902896919376	0.19402223753652761	3174.9351576228582	4407422.3704647655	0.05111927656593901	1.351339776236719	5.69794534625599e-07	6.244281720756997	-0.33160851283436155	
RKTS(ph)SDDES(ph)EEDEDDLLQR	ddPTM_K562_Methotrexat_30min_R1	1	RKTSSDDESEEDEDDLLQR	19	2	Q9Y5J1	Q9Y5J1	UTP18	U3 small nucleolar RNA-associated protein 18 homolog	2	RKT(0.37)S(0.52)S(0.14)DDES(0.97)EEDEDDLLQR	79.237	0.012639	10297000.0	1934.6	1014.2	1796.9	1559.2	823.88	833.01	958.2	1187.2	1381.1	1602.5	True	False	1849.557300424633	1181.7793115475754	1419.755246091418	1422.5073568141695	932.2346609102356	993.9773930952899	1173.100741609564	1145.445503088634	1316.8929624506372	1312.2717214575089	1.4094316521355608	0.9005599162306122	1.0819064549486213	1.084003665974166	0.7103975843317151	0.7574478492848288	0.8939465222237883	0.8728721989196072	1.0035215580108636	1.0	10.357850762705858	-3.1186326809136555	0.9065976520536217	0.8915235951528196	199.9963989995531	0.5745511412104791	0.12259024793990479	564.4909789184072	1.5320806781018435	0.0426186572107077	232142.79817452238	0.0007609696203500403	3.1186326809136555	199.10487540440027	
RLAAAEETAVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	RLAAAEETAVSPR	13	1	Q9BUH6	Q9BUH6	C9orf142	Protein PAXX	1	RLAAAEETAVS(1)PR;RLAAAEETAVS(1)PR	160.03	1.3905e-06	100371000.0	2991.8	2907.3	2931.0	3485.0	3367.5	3025.7	3335.1	3683.9	3435.0	3832.2	True	False	2860.2840542801705	3387.681909349503	2315.823154484916	3179.4754608115563	3810.385275301283	3610.373702942843	4083.0810721582698	3554.335148945604	3275.3075997523283	3138.1514452227543	0.9114550729010913	1.0795151121551547	0.7379577419726895	1.013168266831644	1.2142133169200224	1.1504778421191106	1.3011102693510834	1.1326206561370424	1.0437060342445768	1.0	11.615699262206999	-7.56610086932776	5.721647231095234	1.1536821453026864	0.9183544048143801	0.47106800412404326	0.10971219934184011	0.1548647645872644	12.329510404131096	0.03223744754002328	0.0423735913150635	2.7158084213460774e-08	7.56610086932776	-0.2353277404883063	
RLAAQES(ph)SETEDMSVPR	ddPTM_K562_Methotrexat_30min_R1	1	RLAAQESSETEDMSVPR	17	1	A0A087WYF6;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2	A0A087WYF6	FAM21A	WASH complex subunit FAM21A	1	RLAAQES(0.469)S(0.469)ET(0.063)EDMSVPR	77.051	0.011124	0.0	1172.1	1127.6	1351.4	1360.5	1115.9	1106.6	1246.3	1545.1	1191.2	1482.8	True	False	1120.5758874329126	1313.91673407715	1067.7596079737013	1241.2270773125178	1262.6604094160953	1320.4347885370487	1525.8145003840534	1490.7579572289828	1135.8213720014467	1214.2505513742242	0.9228539251348945	1.0820804096733816	0.8793569060069751	1.0222166058790445	1.0398680964048839	1.0874483746724684	1.2565895058949883	1.227718575496484	0.9354093936510751	1.0	10.245850426131549	-8.021668096380344	2.0020579626702117	1.1258534767590425	0.9752141643696345	0.23785752191720155	0.10265530776883856	0.42735012268424943	3.43661170245991	0.03808837513630782	0.04117576634099941	9.5133155804665e-09	8.021668096380344	-0.15063931238940798	
RLAAQESSET(ph)EDMSVPR	ddPTM_K562_Methotrexat_30min_R1	1	RLAAQESSETEDMSVPR	17	1	A0A087WYF6;F8W7U3;E7ESD2;Q641Q2-2;Q641Q2	A0A087WYF6	FAM21A	WASH complex subunit FAM21A	1	RLAAQES(0.04)S(0.088)ET(0.823)EDMS(0.05)VPR	84.859	0.0092038	8110200.0	1486.5	1389.3	1582.6	1790.3	1414.7	1251.3	1205.7	1607.9	1397.3	1936.6	True	False	1421.1552398848423	1618.858210937731	1250.433887508642	1633.3471786200676	1600.757846761314	1493.0960156302274	1476.10891688442	1551.3492456336035	1332.3398279865874	1585.8629739623152	0.896139996467698	1.0208058561913307	0.7884879766026722	1.0299421863284393	1.0093922823368426	0.9415037995998434	0.9307922192018443	0.9782366264328132	0.8401355286438812	1.0	10.6310524054358														
RLAAQLGAPT(ph)SPIPDSAIVNTR	ddPTM_K562_Methotrexat_30min_R1	1	RLAAQLGAPTSPIPDSAIVNTR	22	1	B8ZZS4;Q9H8Y5	B8ZZS4	ANKZF1	Ankyrin repeat and zinc finger domain-containing protein 1	1	RLAAQLGAPT(0.5)S(0.5)PIPDSAIVNTR	65.817	0.008823600000000001	41617000.0	894.49	599.65	1059.2	1267.2	718.64	683.71	700.67	1314.2	1185.8	1427.1	True	False	855.1692906320836	698.7319701927662	836.888394824437	1156.1065434549225	813.1537562709766	815.8272811048853	857.8130835144782	1267.9788411043485	1130.6724168227972	1168.6383611182591	0.7317655479097743	0.5979026475942105	0.7161226455236557	0.9892765648636204	0.6958129934164384	0.698100719819113	0.7340278327793766	1.085005321826875	0.9675126663999523	1.0	10.190612836996003	-9.25352993398205	24.323018101469593	1.0196942489632301	0.7379323859013674	0.6363103444812055	0.09697839864370689	266.99371543109845	821059.3601741336	0.04959346472692663	0.02792325690549477	5.57789154897041e-10	9.25352993398205	-0.2817618630618627	
RLASMAT(ph)LLAR	ddPTM_K562_Methotrexat_30min_R1	1	RLASMATLLAR	11	1	Q96P11-5;Q96P11;Q96P11-2;Q96P11-4	Q96P11-5	NSUN5	Probable 28S rRNA (cytosine-C(5))-methyltransferase	1	RLAS(0.238)MAT(0.762)LLAR	63.693999999999996	0.030701999999999997	12500000.0	308.12	275.69	288.49	185.06	281.18	277.87	285.82	386.87	228.13	187.49	True	False	294.5754137324709	321.24308657123953	227.93989144911427	168.8360771241857	318.1600985031075	331.5644448678743	349.9224107355932	373.2635628199965	217.52428609359487	153.53374418475403	1.9186362926054557	2.0923288771273194	1.4846240652792522	1.099667555303137	2.072248678572257	2.159554218054423	2.279123801700009	2.4311500042025402	1.4167848719421456	1.0	7.262411960795578														
RLASNY(ph)LNNPLFLT(ph)ARANE	ddPTM_K562_Methotrexat_30min_R1	1	RLASNYLNNPLFLTARANE	19	2	B1AHC6	B1AHC6	PHF21B		2	RLAS(0.011)NY(0.989)LNNPLFLT(1)ARANE	69.979	0.015131	4741200.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
RLAVPTEVSTEVPEMDT(ph)ST	ddPTM_K562_Methotrexat_30min_R1	2	RLAVPTEVSTEVPEMDTST	19	1	O00488	O00488	ZNF593	Zinc finger protein 593	1	RLAVPTEVSTEVPEMDT(0.333)S(0.333)T(0.333);RLAVPTEVSTEVPEMDT(0.333)S(0.333)T(0.333)	111.7	0.00037011	166018000.0	2201.27	2025.56	2357.05	2384.1499999999996	2162.0299999999997	1942.2599999999998	2299.65	2768.1	2641.7	2287.2	True	False	2104.5048065262754	2360.249361366895	1862.3374159940886	2175.1352711316727	2446.374840908575	2317.574256627481	2815.405051599283	2670.7443540259846	2518.8879435999197	1872.9659165788544	1.1236215180948665	1.2601667443463727	0.9943253101988211	1.1613320092363233	1.3061502183537357	1.237381970549013	1.5031800774794029	1.4259439162162366	1.3448658735877594	1.0	10.87110893094349	-7.791603899378741	2.9656627322967233	1.3363646502365154	1.1297821014622003	0.2441769051600602	0.13940722866745456	0.3150852289732312	5.683284059424854	0.04422565107441199	0.05421961543339539	1.6158316128951604e-08	7.791603899378741	-0.20658254877431514	
RLAVPTEVSTEVPEMDTS(ph)T	ddPTM_K562_Methotrexat_30min_R1	1	RLAVPTEVSTEVPEMDTST	19	1	O00488	O00488	ZNF593	Zinc finger protein 593	1	RLAVPTEVSTEVPEMDT(0.071)S(0.465)T(0.465)	123.76	0.00011812	90997000.0	1244.0	686.98	963.31	1057.5	986.87	887.89	946.79	1080.7	983.86	1046.4	True	False	1189.3152495235422	800.4917683365741	761.1243954100535	964.7906168746689	1116.6607027874027	1059.462176390892	1159.131758660529	1042.6911684534095	938.1205633456548	856.8868201766843	1.3879490517526147	0.9341861136007648	0.888243788430676	1.125925377958008	1.303160086599482	1.2364085331274415	1.3527244571477057	1.2168365108456374	1.0948010183564507	1.0	9.742960851810475	-7.5266472623031415	22.498889072519674	1.220311308506684	1.0482910274584492	0.11381541421813868	0.15587202635818997	50.310710447244816	300357.6482289656	0.04561366846655666	0.059271541214713154	2.9740806247777958e-08	7.5266472623031415	-0.17202028104823475	
RLDDQES(ph)PVYAAQQR	ddPTM_K562_Methotrexat_30min_R1	2	RLDDQESPVYAAQQR	15	1	Q96ST3;H3BMA2;H3BT34;H3BQ76;H3BQ88;H3BNA0;H3BNZ3;H3BQL7;H3BP90	Q96ST3	SIN3A	Paired amphipathic helix protein Sin3a	1	RLDDQES(1)PVYAAQQR;RLDDQES(1)PVYAAQQR	166.79	4.4025e-09	39105000.0	5506.5	4684.7	5778.200000000001	5789.1	5089.4	5162.2	4917.3	5602.1	5796.0	6287.2	True	False	5264.440853296929	5458.767048715169	4565.434783775074	5281.578591157589	5758.7453066424205	6159.722090534931	6020.1296980971665	5405.07096769949	5526.545225084276	5148.527155786367	1.0225139528263512	1.060257989040638	0.8867457907149304	1.0258426208788054	1.118522857584666	1.196404700636005	1.1692916276708798	1.0498285828452505	1.0734225649121922	1.0	12.329944062793837	-7.662449901309094	4.597623479948621	1.1117625187837932	0.9912707643535834	0.3583086859922263	0.06723515133891371	0.22474613786390857	8.188118977595886	0.021060591793632344	0.027291047058717977	2.1754549724146013e-08	7.662449901309094	-0.12049175443020976	
RLDEEEEDNEGGEWER	ddPTM_K562_Methotrexat_30min_R1	1	RLDEEEEDNEGGEWER	16	1	Q99613-2;Q99613	Q99613-2	EIF3C	Eukaryotic translation initiation factor 3 subunit C	0		96.06700000000001	0.0036955	16915000.0	551.88	400.28	563.08	566.19	482.61	559.22	316.36	473.7	500.58	596.48	False	True	527.6200160024531	466.41946640333583	444.89720294348956	516.5530017666847	546.0816741538687	667.2813504840855	387.3117831513269	457.03970250428375	477.3081450608502	488.4516919906242	1.0801887364791454	0.9548937470203066	0.9108315320402848	1.0575314002118348	1.117985019006446	1.3661153424705381	0.7929377449239368	0.9356906936726438	0.9771859794683895	1.0	8.932072076079312														
RLEEETEYLNS(ph)QLEDAIR	ddPTM_K562_Methotrexat_30min_R1	1	RLEEETEYLNSQLEDAIR	18	1	Q8TD16;Q8TD16-2	Q8TD16	BICD2	Protein bicaudal D homolog 2	1	RLEEETEYLNS(1)QLEDAIR	108.08	0.00051666	3876700.0	683.68	403.72	430.87	736.56	434.09	479.6	344.84	471.35	563.83	685.03	True	False	653.6262458153175	470.4278679333336	340.43627518693853	671.9869283831738	491.18044369874815	572.2759123281845	422.17914812840945	454.77235333627675	537.6176663663331	560.9644289235803	1.1651830528177045	0.8386055223430567	0.6068767601542805	1.1979136175757732	0.8755999816980575	1.0201643505744376	0.7525952205891517	0.8106973096474714	0.9583810285403539	1.0	9.131765481388518	-8.746475364368418	24.998736385946014	0.8646431130984136	0.9378193234412793	0.03269757414548702	0.17086100136269894	961.0626458103192	1605542.9390713954	0.06571853143461433	0.05069454829642104	1.7927702455172259e-09	8.746475364368418	0.0731762103428657	
RLEEFEGERER	ddPTM_K562_Methotrexat_30min_R1	2	RLEEFEGERER	11	2	Q08378;Q08378-2;Q08378-4	Q08378	GOLGA3	Golgin subfamily A member 3	0	;	118.03	0.0070039	20208300.0	3237.1000000000004	2949.4	3139.7	3686.5	3117.8	2653.8	2719.3	3455.0	3515.1000000000004	3498.0	False	True	3094.800959994097	3436.7382187718586	2480.7198765391663	3363.310268660489	3527.8453485773825	3166.609291360582	3329.172246565316	3333.485691687357	3351.6837682356327	2864.478303686969	1.0804064935701108	1.1997780588347673	0.866028509745089	1.1741440891109058	1.2315838957609038	1.1054750483830615	1.162226378981549	1.1637322186719699	1.1700852346905768	1.0	11.484056695121408														
RLEESDVLQEAR	ddPTM_K562_Methotrexat_30min_R1	2	RLEESDVLQEAR	12	1	M0R301;M0R124;M0QXU7;O43615	M0R301	TIMM44	Mitochondrial import inner membrane translocase subunit TIM44	0	;	172.09	2.9090999999999995e-07	17535000.0	2283.73	1941.9699999999998	2372.14	2216.2799999999997	2065.21	2333.06	2097.84	2485.88	2288.7599999999998	3000.3	False	True	2183.3399636610907	2262.8475346539567	1874.2602312111399	2021.9821733966828	2336.821313854481	2783.8908257222556	2568.33402189335	2398.450191389804	2182.3560471642304	2456.9165964985727	0.8886504192989846	0.9210111315454542	0.7628505720878787	0.8229755036366605	0.9511195118241933	1.1330831619150865	1.045348476848405	0.9762033415411451	0.8882499512903177	1.0	11.262633168874093	-7.927672911978902	4.884375298054635	1.0126857299666019	0.8492746049622709	0.5423408322609249	0.06904157085408524	0.17003360724218086	7.621408328964716	0.023677142329222165	0.02687198572149116	1.1812099266213964e-08	7.927672911978902	-0.16341112500433097	
RLEEWLGR	ddPTM_K562_Methotrexat_30min_R1	2	RLEEWLGR	8	1	P56192-2;P56192	P56192-2	MARS	Methionine--tRNA ligase, cytoplasmic	0	;	93.14299999999999	0.023467	55884000.0	3660.3	3098.0	4518.5	4361.5	3668.8	3465.9	3611.2	4000.6	3908.7000000000003	4372.6	False	True	3499.3975947194695	3609.891843003735	3570.1285989560206	3979.1340666655983	4151.311506466324	4135.636122890438	4421.10352546489	3859.8966304383357	3726.9853901461174	3580.6797686396894	0.9772997924494378	1.0081582482242313	0.9970533054153353	1.1112789536544574	1.1593640802018494	1.1549863126859787	1.2347106725895456	1.0779787302523067	1.040859733614774	1.0	11.806017784372264	-7.279996038233591	4.646580644130819	1.1243938389307133	0.9943428818723108	0.4130905784831578	0.06280777148888717	0.17980416876238378	10.504080083678332	0.018281340249303196	0.02934360496445783	5.248122477249472e-08	7.279996038233591	-0.13005095705840253	
RLGDS(ph)SLSR	ddPTM_K562_Methotrexat_30min_R1	3	RLGDSSLSR	9	1	Q14152-2;Q14152	Q14152-2	EIF3A	Eukaryotic translation initiation factor 3 subunit A	1	RLGDS(0.797)S(0.202)LSR;RLGDS(0.767)S(0.232)LSR;RLGDS(0.778)S(0.218)LS(0.004)R	92.866	0.0097054	35743600.0	7952.4	6348.199999999999	7432.299999999999	8403.5	6782.199999999999	7220.400000000001	7369.500000000001	7318.099999999999	8670.9	9612.900000000001	True	False	7602.822017934892	7397.13214904981	5872.361798389033	7666.778202275445	7674.178177920817	8615.640111289458	9022.297970456777	7060.718275061429	8267.791751584407	7871.910659094473	0.9658166037684001	0.9396870047685122	0.7459893858938367	0.9739412112633625	0.9748812594887348	1.09447889901237	1.1461382580648642	0.8969510174641188	1.0502903436832798	1.0	12.942498131811195	-7.6894704403358825	2.6711334348584947	1.0347802075624748	0.8880118212179983	0.36205830898680325	0.08361013456278978	0.3006931165299154	4.364951654181195	0.027536229779302236	0.036262458006947995	2.044229068942794e-08	7.6894704403358825	-0.14676838634447653	
RLGDSS(ph)LSR	ddPTM_K562_Methotrexat_30min_R1	1	RLGDSSLSR	9	1	Q14152-2;Q14152	Q14152-2	EIF3A	Eukaryotic translation initiation factor 3 subunit A	1	RLGDS(0.231)S(0.762)LS(0.007)R	85.92399999999999	0.016284	10394000.0	2702.5	2211.8	2162.7	2850.5	2275.5	2104.8	1977.9	2647.5	2617.9	3347.3	True	False	2583.7013358821323	2577.2623558281653	1708.7788250441922	2600.6010906867564	2574.7681348026917	2511.5228112351174	2421.49442374197	2554.385924382714	2496.1944004051293	2741.071533999824	0.9425880732532164	0.9402389991870714	0.623398114149436	0.9487534558763994	0.9393290553951873	0.9162558437759029	0.8834116124683834	0.9318932004139656	0.9106637201702775	1.0	11.420524263464285														
RLHPPS(ph)PVPQGVCPAHREPLAAFCGDELR	ddPTM_K562_Methotrexat_30min_R1	2	RLHPPSPVPQGVCPAHREPLAAFCGDELR	29	2	Q96F44-2;Q96F44-3;Q96F44	Q96F44-2	TRIM11	E3 ubiquitin-protein ligase TRIM11	1	RLHPPS(1)PVPQGVCPAHREPLAAFCGDELR;RLHPPS(1)PVPQGVCPAHREPLAAFCGDELR	53.361000000000004	0.0028285	184938000.0	3474.1	2881.5	3435.2	3257.0	3214.7	3261.8	3048.6	3665.3	3924.6	3818.6	True	False	3321.382723769884	3357.6188978745186	2714.198464785599	2971.4638668187235	3637.4893970337152	3892.0966864722113	3732.3261541128295	3536.3893214881823	3742.14620261659	3127.014537009452	1.0621577496554646	1.0737458550754315	0.8679839612710425	0.9502558531948845	1.1632467179101957	1.2446685617887956	1.1935749290383129	1.1309155360915717	1.1967153201006302	1.0	11.610570210807898	-7.7693392557749075	24.803830256951382	1.167826149898364	0.9860114311760145	0.49884225889118516	0.08102830620563095	126.11933194236086	395985.43293964176	0.025415175533664274	0.029336762690723578	1.7008293604597956e-08	7.7693392557749075	-0.18181471872234944	
RLKGT(ph)SPS(ph)S(ph)S(ph)SR	ddPTM_K562_Methotrexat_30min_R1	1	RLKGTSPSSSSR	12	2	Q8N1F7;Q8N1F7-2;H3BVG0	Q8N1F7	NUP93	Nuclear pore complex protein Nup93	4	RLKGT(1)S(0.547)PS(0.723)S(0.723)S(0.706)S(0.302)R	70.628	0.028383999999999996	17024000.0	2442.9	3033.6	4163.3	2798.0	2393.8	2257.6	2298.3	1828.7	1540.1	1491.0	True	False	2335.513041045868	3534.850837616568	3289.4802248608157	2552.7036841752492	2708.6266583567053	2693.8492486908017	2813.752279734148	1764.3835844829732	1468.5010871553295	1220.9654519146002	1.9128412170741946	2.895127648430638	2.6941632293547455	2.090725564898127	2.2184302218455882	2.2063271687717023	2.3045306280549487	1.4450724889195163	1.2027376244369306	1.0	10.253806663483198	-9.399606452458588	1.6816208989818784	1.0290464384920934	2.3766086069154895	0.782220964185573	0.27312827541081924	0.1800395543040561	0.906690419378695	0.23822573428962895	0.08383256172616996	3.984680894999199e-10	9.399606452458588	1.347562168423396	
RLLQPGGGPDVGTGAPRPGCS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	RLLQPGGGPDVGTGAPRPGCSPR	23	2	Q9NXH8	Q9NXH8	TOR4A	Torsin-4A	1	RLLQPGGGPDVGTGAPRPGCS(1)PR;RLLQPGGGPDVGTGAPRPGCS(1)PR	136.81	8.169e-13	47528000.0	2257.62	1905.77	1990.02	2477.3	2077.06	1730.53	2433.0	2379.8	2326.81	2740.7	True	False	2158.3777279978594	2220.66609994875	1572.3419972323688	2260.1189552563756	2350.2297965604394	2064.93043069494	2978.6621836110085	2296.10108511652	2218.6371109693478	2244.3326720740065	0.9617013354812879	0.9894549625286228	0.7005833033564292	1.0070338427893495	1.0471842369021758	0.92006432753426	1.3271928091027618	1.0230662832149007	0.9885509125164973	1.0	11.132070823701106	-7.506867115601988	23.894336326918804	1.0564871797913755	0.8876908928933398	0.26865772102923946	0.1231848581886794	533.4026054465055	796002.6913807101	0.0355374871614666	0.050974229004817274	3.1126685983862776e-08	7.506867115601988	-0.16879628689803572	
RLLS(ph)TDAEAVSTR	ddPTM_K562_Methotrexat_30min_R1	2	RLLSTDAEAVSTR	13	1	Q15545	Q15545	TAF7	Transcription initiation factor TFIID subunit 7	1	RLLS(0.931)T(0.069)DAEAVSTR;RLLS(0.947)T(0.053)DAEAVSTR	143.93	1.4842e-07	36872000.0	2031.5099999999998	1798.3200000000002	2576.3999999999996	2596.3	2066.34	2063.96	1730.69	2024.5700000000002	1854.87	2066.93	True	False	1942.20725286139	2095.4618137864677	2035.648848589199	2368.6864100157973	2338.0999286610386	2462.791059234529	2118.841288349255	1953.3647255628014	1768.6374985597079	1692.5889480387941	1.14747721536988	1.2380216804644053	1.2026835286546735	1.399445750109853	1.3813749235277704	1.455043802624476	1.2518345288762285	1.1540691718601663	1.0449303125894986	1.0	10.725015936200956	-9.502885093336543	2.0002281556719432	1.0131224036397457	1.3056410488163883	0.6112229519824646	0.08888634511138963	0.2570710005514465	1.8641431110676236	0.08495576266196365	0.028139622328039585	3.1413397270440997e-10	9.502885093336543	0.2925186451766426	
RLLVVHY(ph)EELR	ddPTM_K562_Methotrexat_30min_R1	1	RLLVVHYEELR	11	1	I3L3E6;Q658N2	I3L3E6	WSCD1	WSC domain-containing protein 1	1	RLLVVHY(1)EELR	54.776	0.032162	43440000.0	3035.9	3249.9	2660.5	3354.1	3472.3	3309.2	3863.5	3827.8	3533.7	3558.4	True	False	2902.445471084019	3786.890736145204	2102.0974078836985	3060.051260576198	3928.968312228253	3948.6560656305855	4729.988222926893	3693.1741043823054	3369.4190582954284	2913.9392783990015	0.9960555776161206	1.2995777791999241	0.7213936897952962	1.0501424251563245	1.348335684739092	1.3550920895647784	1.62322813587443	1.2674162882390043	1.1563106627762951	1.0	11.5087550990359	-7.728025115527244	6.153259448669936	1.3251557854427518	1.013143572867043	0.30673460495039695	0.19901919411043822	0.2069613576579236	22.088618625520994	0.0600124490674691	0.07605414170011333	1.8705739607510173e-08	7.728025115527244	-0.31201221257570877	
RLMY(ph)FAYTVGLS(ph)LLT(ph)AISTQR	ddPTM_K562_Methotrexat_30min_R1	1	RLMYFAYTVGLSLLTAISTQR	21	1	Q8TDS7	Q8TDS7	MRGPRD	Mas-related G-protein coupled receptor member D	3	RLMY(0.494)FAY(0.494)T(0.139)VGLS(0.88)LLT(0.983)AIS(0.009)T(0.001)QR	44.595	0.029743000000000002	18738000.0	1609.9	1574.2	2326.9	1890.8	1369.5	1462.6	934.0	1173.5	1183.1	1506.6	True	False	1539.1307236398309	1834.3097931751056	1838.5154889699613	1725.0364996563817	1549.6132544989175	1745.2267501484623	1143.4732755826883	1132.2273398538687	1128.0979392334725	1233.7401407475088	1.247532339109344	1.4867878028704802	1.4901967020834923	1.3982170496707695	1.256028885920843	1.4145821251232449	0.9268347829631863	0.9177194633286919	0.9143724046702177	1.0	10.268822840305049	-8.763098715909301	24.99999479050803	0.932874860248753	1.386875722620921	0.8813721743277906	0.07950202353019525	14.293379308740276	215340.62881119814	0.033352727427514856	0.02382447327260141	1.725445650543574e-09	8.763098715909301	0.45400086237216797	
RLNECIS(ph)PVANEMNHLPAHSHDLQR	ddPTM_K562_Methotrexat_30min_R1	1	RLNECISPVANEMNHLPAHSHDLQR	25	1	P23497-2;P23497-3;P23497;P23497-4;P23497-5	P23497-2	SP100	Nuclear autoantigen Sp-100	1	RLNECIS(1)PVANEMNHLPAHSHDLQR	80.685	0.00028363	82428000.0	1189.0	864.88	1112.0	1198.5	837.87	871.59	1212.9	1433.5	915.2	1456.1	True	False	1136.7329836684016	1007.786719553606	878.6063963791289	1093.4293657912917	948.0645911259647	1040.0124320811556	1484.9237001651425	1383.0829924844659	872.6525517593391	1192.3861801025141	0.9533261980365054	0.8451848372370121	0.7368471817608551	0.9170094253333977	0.7950986072687087	0.8722110750996306	1.245337898865515	1.159928734133397	0.7318539633563295	1.0	10.219635844193785	-8.555961574740458	24.79330760288505	1.0492030313715799	0.8454374416847313	0.29686018242111745	0.13599591022042073	203.15275260543225	152247.20143139348	0.05183597179042635	0.040152223027785504	2.77995922052532e-09	8.555961574740458	-0.20376558968684855	
RLNHS(ph)PPQSSSR	ddPTM_K562_Methotrexat_30min_R1	1	RLNHSPPQSSSR	12	1	A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6	A0A087X0H9	RBM26	RNA-binding protein 26	1	RLNHS(0.839)PPQS(0.029)S(0.084)S(0.048)R	85.976	0.016693	4034500.0	1484.2	1213.9	1621.5	1336.6	1251.5	1258.7	1274.2	1248.0	1395.2	1513.1	True	False	1418.9563451308998	1414.4763422279643	1281.169309108595	1219.4223532053743	1416.0941862032828	1501.925960899678	1559.971785596855	1204.1071326268664	1330.3374565282224	1239.0629277612213	1.1451850534296233	1.1415694155128067	1.033982439797027	0.9841488482014918	1.1428751151177827	1.2121466369859084	1.2589931880340106	0.9717885231240723	1.0736641591980474	1.0	10.275033743539847	-9.300410430443453	24.99992453017846	1.0170447465343138	1.1258241079988518	0.31839630303594	0.07755661599423513	820.2496657368135	526185.5162517091	0.04735013195356782	0.022746893170047234	5.007138098605608e-10	9.300410430443453	0.10877936146453804	
RLNVWDL	ddPTM_K562_Methotrexat_30min_R1	1	RLNVWDL	7	1	Q5JP01	Q5JP01	RBBP7		0		84.025	0.029156	8089400.0	4194.4	4059.0	4881.6	4938.5	3831.1	3560.1	3651.0	4236.3	4216.2	4101.2	False	True	4010.0191982327497	4729.680758796697	3857.018871011114	4505.54937251589	4334.956801249218	4248.038939698853	4469.829688599998	4087.3069278423045	4020.1897822636856	3358.4329385594606	1.1940149681692842	1.4082998962085598	1.1484579092609521	1.3415630012396391	1.290767712369037	1.2648872308645749	1.3309271825202058	1.2170280016356323	1.1970433400966087	1.0	11.713572506018702	-10.197058394127904	1.2546132110231836	1.0008405653943921	1.283810941008959	0.5861313003658322	0.07063916911646101	0.48310634974886724	1.4953089566533428	0.06186359247396941	0.018885314019418575	6.352455126184932e-11	10.197058394127904	0.28297037561456695	
RLPDAHSDYAR	ddPTM_K562_Methotrexat_30min_R1	2	RLPDAHSDYAR	11	1	Q96PK6	Q96PK6	RBM14	RNA-binding protein 14	0	;	121.36	0.00078336	18873400.0	2222.68	1890.86	2489.8	2283.6	2066.7200000000003	1953.33	2220.7200000000003	2642.2	2375.0299999999997	2855.3999999999996	False	True	2124.9736485618864	2203.292475875418	1967.225005130177	2083.4003335177263	2338.529905321653	2330.783377456238	2718.772989884357	2549.2723283867845	2264.615373694255	2338.2593906082816	0.9087843962465985	0.9422788954574655	0.8413202628551905	0.8910047969381808	1.000115690634862	0.9968027443054132	1.1627336987523387	1.0902435968507367	0.9685047701680058	1.0	11.191219266194041	-8.011605514869625	2.0611756646107504	1.0589232359455947	0.8948526091004753	0.5953545517157801	0.05704197364462309	0.21993854894035442	1.8764428312976802	0.021568841746527435	0.023457188791347464	9.736312061067819e-09	8.011605514869625	-0.16407062684511942	
RLPENLYNDR	ddPTM_K562_Methotrexat_30min_R1	2	RLPENLYNDR	10	1	E5RHG9;B7Z2R2;P14927;P14927-2	E5RHG9	UQCRB	Cytochrome b-c1 complex subunit 7	0	;	150.04	1.2407e-07	19861300.0	3047.8	2817.8	3082.3	3041.8	2308.1	2892.9	2248.79	2585.1000000000004	3243.3	3547.6	False	True	2913.8223613326777	3283.393555589388	2435.367352121754	2775.1301166991657	2611.655606213182	3451.91198243162	2753.1384019246198	2494.180567751372	3092.5196909102533	2905.0952630531415	1.0030040661284079	1.1302188941434814	0.8383089474189146	0.9552630345700308	0.8989913822889355	1.1882267773910433	0.9476929851281982	0.8585537966593515	1.0645157596863575	1.0	11.504369757510807	-9.583445470496422	0.0022713592786440745	0.1325158135097813	1.832365080210652	0.0	0.10800592734105945	414837.20761730184	912.3024424765184	341634.00136133964	341090.54322028137	2.609483346100863e-10	9.583445470496422	1.6998492667008707	
RLQGSGPEPLCVHCSAGCGRTGVLCT(ph)VDY(ph)VR	ddPTM_K562_Methotrexat_30min_R1	1	RLQGSGPEPLCVHCSAGCGRTGVLCTVDYVR	31	2	E7EMB8;Q99952-2;Q99952	E7EMB8	PTPN18	Tyrosine-protein phosphatase non-receptor type 18	2	RLQGSGPEPLCVHCS(0.003)AGCGRT(0.014)GVLCT(0.991)VDY(0.991)VR	40.453	0.016439	25107000.0	303.66	336.59	491.02	461.73	353.15	359.59	366.97	349.91	365.87	334.5	True	False	290.31146999221755	392.2057764482334	387.9616121853239	421.25084778207196	399.5954149881659	429.0756783029436	449.2723639620766	337.60346696912416	348.8607835578992	273.9188086287281	1.059844964446046	1.4318322221524864	1.416337980321645	1.5378675523995835	1.4588096998106508	1.5664337927393532	1.6401661726377623	1.2324946529200003	1.2735919278575285	1.0	8.097604521841216	-9.921701164595538	1.6039141957508514	1.0148470252678925	1.4466372558513727	0.41884746788282223	0.15515481102692139	0.3502441009854535	2.004914008015747	0.15048463074746365	0.04425665304721926	1.1975642846009777e-10	9.921701164595538	0.4317902305834802	
RLQSEINMAAT(ph)ET(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	RLQSEINMAATETR	14	1	K7EQ71;K7EKI8;O60437	K7EQ71	PPL	Periplakin	2	RLQS(0.149)EINMAAT(0.851)ET(1)R	64.827	0.026519	0.0	0.0	0.0	67.357	0.0	58.318000000000005	0.0	0.0	119.62	116.82	0.0	True	False	0.0	0.0	53.219686187867815	0.0	65.9878391937699	0.0	0.0	115.41289679873857	111.38906369812713	0.0											0.0														
RLQSIGTENTEENRR	ddPTM_K562_Methotrexat_30min_R1	2	RLQSIGTENTEENRR	15	2	H3BMQ8;H3BUH7;H3BR04;H3BPS8;H3BQN4;J3KPS3;P04075;P04075-2	H3BMQ8	ALDOA	Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase A	0	;	119.17	0.0020786999999999997	84210900.0	1570.73	1345.47	1742.83	1882.5100000000002	1340.76	1127.57	1502.24	1859.42	1867.93	1644.72	False	True	1501.6825899389974	1567.786048420346	1377.0338001811497	1717.4732710853282	1517.093440746235	1345.4569442533175	1839.155560504644	1794.0231446707105	1781.0903420102961	1346.8452703373448	1.1149629604912747	1.1640431777494844	1.0224142524079574	1.2751823159724591	1.1264051440491365	0.9989692015002736	1.3655284693868288	1.3320187434903794	1.3224164506767624	1.0	10.395368403807487	-8.77044368189736	24.999922103707824	1.2826591355980055	1.1224534510056394	0.23123811095263502	0.1188125997002278	245.83767603669742	682547.2194123886	0.04718869077576636	0.03233208176371162	1.6965095866493066e-09	8.77044368189736	-0.16020568459236606	
RLRRTINILQYVTPTAVGIR	ddPTM_K562_Methotrexat_30min_R1	1	RLRRTINILQYVTPTAVGIR	20	3	H7BYF9;Q5GH73-2;Q5GH73	H7BYF9	XKR6	XK-related protein;XK-related protein 6	0		50.563	0.029856	0.0	0.0	0.0	81.454	0.0	82.816	0.0	81.40100000000001	0.0	0.0	0.0	False	True	0.0	0.0	64.35791853477122	0.0	93.70775559297729	0.0	99.65724636585274	0.0	0.0	0.0											0.0														
RLS(ph)ESQLSFR	ddPTM_K562_Methotrexat_30min_R1	4	RLSESQLSFR	10	1	Q96PK6	Q96PK6	RBM14	RNA-binding protein 14	1	RLS(0.997)ES(0.003)QLSFR;RLS(0.99)ES(0.01)QLSFR;RLS(0.977)ES(0.023)QLSFR;RLS(0.968)ES(0.032)QLSFR	140.91	4.9153e-05	367074000.0	9590.7	7081.2	8064.300000000001	9602.8	7649.6	7904.400000000001	8029.200000000001	9841.9	9063.7	9609.7	True	False	9169.104311579928	8251.247940180134	6371.713635180045	8760.937433308813	8655.656481646527	9431.813430790033	9829.952488553028	9495.754798557979	8642.330565320286	7869.290210103101	1.1651755198719245	1.0485377613328646	0.8096935638489515	1.1133071979047051	1.099928487900197	1.198559613252141	1.249153637253421	1.206685043381259	1.0982350802394738	1.0	12.94201779885171	-7.505670641358093	24.02621057430539	1.155696383049337	1.0034799131547136	0.2428155876874779	0.10466776465831103	563.5137933257456	786786.5038049581	0.030441461653787496	0.04393161162593964	3.121255773151478e-08	7.505670641358093	-0.15221646989462334	
RLS(ph)GSSLCSGSWVSADGFLR	ddPTM_K562_Methotrexat_30min_R1	1	RLSGSSLCSGSWVSADGFLR	20	1	O75400-3;O75400;H0YG38;F5H578	O75400-3	PRPF40A	Pre-mRNA-processing factor 40 homolog A	1	RLS(0.804)GS(0.172)S(0.023)LCSGSWVSADGFLR	76.152	0.0048247	16952000.0	485.13	457.66	434.57	497.19	529.72	341.98	420.82	576.33	347.49	506.64	True	False	463.80426607826035	533.2805361100997	343.3596957504302	453.60212463727345	599.3874648946091	408.06279503334565	515.1995972491511	556.0601472330467	331.3352657461241	414.8825865580232	1.1179169266324347	1.2853770039719852	0.827606910666061	1.0933264960587472	1.4447158890598126	0.9835621167394458	1.2417961465275866	1.3402831674529179	0.7986241806265478	1.0	8.696559295493342	-9.77189188249631	24.999651892871967	0.8993120577895846	1.1626712922565139	0.27345431248107244	0.17431257235291303	318.5709886338802	761912.0373796705	0.16094645439852284	0.04333913279870762	1.6908618188821648e-10	9.77189188249631	0.2633592344669293	
RLS(ph)LDIQSPPNIGLR	ddPTM_K562_Methotrexat_30min_R1	1	RLSLDIQSPPNIGLR	15	1	Q9NSI6-3;Q9NSI6-2;Q9NSI6;H0Y5I9;H0Y463;H7BZR9	Q9NSI6-3	BRWD1	Bromodomain and WD repeat-containing protein 1	1	RLS(1)LDIQSPPNIGLR	99.09200000000001	0.0024079	8672200.0	603.68	678.13	755.16	691.1	498.67	525.2	697.63	546.84	649.92	730.57	True	False	577.1429500260218	790.1794562608534	596.6622358719991	630.512336001971	564.2538456524101	626.6874669615564	854.0912861292838	527.6073272481374	619.7053610570687	598.256693631958	0.964707885710803	1.3208033686405596	0.9973348267107901	1.0539160576276918	0.9431634474942187	1.0475226999250071	1.4276334811135651	0.8819079382883036	1.035851947255112	1.0	9.22462082331135														
RLS(ph)LPGLLSQVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	RLSLPGLLSQVSPR	14	1	Q96Q42-3;Q96Q42	Q96Q42-3	ALS2	Alsin	2	RLS(1)LPGLLS(0.086)QVS(0.914)PR	105.57	0.0037266999999999995	12643000.0	1941.3	1631.3	2135.4	1865.1	1753.0	1646.5	1768.9	2007.8	1849.3	2454.2	True	False	1855.962776446986	1900.8445976410558	1687.2087219676198	1701.5895787545585	1983.5502264597328	1964.6628224527851	2165.6208535098685	1937.1845359681263	1763.326446643953	2009.7205983157694	0.9234929362829645	0.9458253048876762	0.8395240230814034	0.8466796728762009	0.9869781043802962	0.9775800795888022	1.07757309912868	0.9639073897095788	0.8773988026602777	1.0	10.972779229129536	-7.77687747638414	24.995481439898455	0.9834686731689559	0.8894225129356511	0.40581916924890116	0.05428467954795997	254.14621717133588	411480.7057062416	0.01800478682649769	0.02048668201458387	1.6715621306610502e-08	7.77687747638414	-0.09404616023330481	
RLS(ph)LPGQLGALTSQPLHR	ddPTM_K562_Methotrexat_30min_R1	2	RLSLPGQLGALTSQPLHR	18	1	Q12809-7;Q12809-4;Q12809;Q12809-2	Q12809-7	KCNH2	Potassium voltage-gated channel subfamily H member 2	1	RLS(1)LPGQLGALTSQPLHR;RLS(1)LPGQLGALTSQPLHR	133.51	7.3917e-07	371210000.0	7748.200000000001	6705.7	8232.400000000001	8011.1	6898.7	6998.9	7002.900000000001	8879.2	8551.7	9180.9	True	False	7407.598405432721	7813.702947588816	6504.531742402466	7308.77930103514	7805.999969924563	8351.338371129543	8573.478588413289	8566.913503221533	8154.133333566801	7518.150045260059	0.9852953666577807	1.0393119185636754	0.8651771650265685	0.9721512948046414	1.0382873343750278	1.11082358304285	1.1403707742995337	1.139497542832719	1.084593056068056	1.0	12.876161993258295	-7.9758045166905145	2.748253866210744	1.1061253935025672	0.9634482501040359	0.5491881018492035	0.05482756260823288	0.19546208889028788	2.999984153681715	0.018906571170026146	0.020886430115061704	1.0572933077666745e-08	7.9758045166905145	-0.14267714339853133	
RLS(ph)NLPTVDPIAVCHELYNTIR	ddPTM_K562_Methotrexat_30min_R1	2	RLSNLPTVDPIAVCHELYNTIR	22	1	C9JCJ2;C9J053;C9JQF1;C9JPI5;E7EVG2;Q86U86-6;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;Q86U86-8;Q86U86	C9JCJ2	PBRM1	Protein polybromo-1	1	RLS(0.994)NLPT(0.006)VDPIAVCHELYNTIR;RLS(0.979)NLPT(0.021)VDPIAVCHELYNTIR	136.83	6.910600000000001e-13	24903000.0	2017.52	1259.88	1595.23	1681.44	1603.17	1460.1599999999999	1457.81	2325.87	2438.88	2393.98	True	False	1928.8322365102365	1468.0537557015953	1260.4130231078045	1534.0307658040142	1814.0149552501134	1742.315254681238	1784.7610020098505	2244.067833784334	2325.4970011306996	1960.4070238594982	0.9838937593239695	0.748851507791175	0.6429343538192394	0.7825062587176069	0.9253256763377743	0.8887517915800476	0.910403288851797	1.144694854931904	1.1862317227125827	1.0	10.936937505502762	-8.885960699626667	1.2317652595776933	1.1279868603612155	0.7967395935731099	0.5951397274132976	0.10218085842485429	0.3240168863790456	0.9593867780105463	0.07560672466608968	0.03871620779936022	1.3002872388923745e-09	8.885960699626667	-0.3312472667881057	
RLS(ph)PPFPLEPAQK	ddPTM_K562_Methotrexat_30min_R1	2	RLSPPFPLEPAQK	13	1	E9PPH6;Q8NEV8-2;Q8NEV8	E9PPH6	EXPH5	Exophilin-5	1	RLS(1)PPFPLEPAQK;RLS(1)PPFPLEPAQK	92.427	0.009332700000000001	13120200.0	9680.7	8107.1	13584.3	10562.2	8463.400000000001	8577.1	7482.8	9427.599999999999	9122.8	11918.2	True	False	9255.148019342882	9446.660477861715	10733.14107044335	9636.22832487341	9576.48544587524	10234.503185216992	9161.008379582592	9096.02596438545	8698.683019219945	9759.698490280734	0.9483026579724453	0.9679254422940667	1.0997410505183152	0.9873489774781175	0.9812275917552219	1.0486495249222192	0.9386569050986204	0.9319986650657079	0.8912860400229158	1.0	13.252620863465024	-8.841242087444948	8.968845606571861	0.9343581810456767	1.0061160405521385	0.307628931484795	0.04746397867079499	0.3542593642546019	36.20253289788119	0.020063378496547716	0.01352421875790505	1.4413117015834187e-09	8.841242087444948	0.07175785950646185	
RLS(ph)PPSSSAASSYSFSDLNSTR	ddPTM_K562_Methotrexat_30min_R1	4	RLSPPSSSAASSYSFSDLNSTR	22	1	P50402	P50402	EMD	Emerin	1	RLS(0.818)PPS(0.079)S(0.079)S(0.025)AASSYSFSDLNSTR;RLS(0.644)PPS(0.248)S(0.097)S(0.011)AASSYSFSDLNSTR;RLS(0.396)PPS(0.152)S(0.226)S(0.226)AASSYSFSDLNSTR;RLS(0.996)PPS(0.003)S(0.001)SAASSYSFSDLNSTR	95.523	7.8483e-05	99282000.0	5546.29	5240.02	5992.85	4592.83	5307.09	4694.870000000001	4068.72	4915.65	5048.4	5371.13	True	False	5302.481732540132	6105.844239889101	4735.032682140884	4190.183724728592	6005.065357297306	5602.087182052178	4981.234031936613	4742.763803283054	4813.700985906735	4398.366309686162	1.2055570998856804	1.3882073047082732	1.076543504735681	0.9526682021688129	1.3652945058425086	1.273674539047637	1.1325191403378225	1.0783012303542008	1.0944293055596381	1.0	12.102752046008355	-15.999999995593086	0.0627335228803017	0.2773342391035297	1.4614475882549898	0.2150252918688612	0.12416324369316749	637.9356491075399	2.9062883021883144	67.79222736244088	10.412338050960042	1.0000000101472944e-16	15.999999995593086	1.1841133491514602	
RLS(ph)QPESAEK	ddPTM_K562_Methotrexat_30min_R1	4	RLSQPESAEK	10	1	S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5	S4R3H4	ACIN1	Apoptotic chromatin condensation inducer in the nucleus	1	RLS(1)QPESAEK;RLS(1)QPESAEK;RLS(0.999)QPES(0.001)AEK;RLS(1)QPESAEK	131.06	0.00098492	410269000.0	17364.9	12889.9	22747.7	18492.4	13888.6	13917.6	13476.7	17512.1	16500.5	19666.6	True	False	16601.55978814416	15019.736884161985	17973.268635713597	16871.200003303195	15715.19433839626	16606.9792273118	16499.19303323899	16896.189517047227	15733.395356539515	16104.788166749597	1.0308462064977801	0.9326255476723475	1.1160201829181287	1.0475890665942413	0.9758088200652212	1.0311827175472597	1.0244899133354446	1.0491407488321753	0.9769389819745118	1.0	13.975202064002573	-9.773920736769998	24.970361207094726	0.9884694813705839	1.0250275299824054	0.09786643602031664	0.045462821494787295	641.9850366598198	1284321.2807613413	0.042514220040260606	0.011282893026219546	1.6829811944983652e-10	9.773920736769998	0.03655804861182155	
RLS(ph)QSDEDVIR	ddPTM_K562_Methotrexat_30min_R1	2	RLSQSDEDVIR	11	1	H0Y917;A0A499FIZ0;Q9H7D7-3;Q9H7D7-4;Q9H7D7-2;Q9H7D7	H0Y917	WDR26	WD repeat-containing protein 26	1	RLS(0.99)QS(0.01)DEDVIR;RLS(0.999)QS(0.001)DEDVIR	125.73	0.0013857000000000001	68527000.0	2296.5	2132.88	2193.1	2110.4300000000003	2287.6499999999996	2243.77	1731.48	2393.9	2167.5699999999997	2698.4	True	False	2195.5486097514577	2485.3021672387995	1732.7982804847738	1925.4118785539563	2588.51607276703	2677.346796923707	2119.808465959223	2309.7051801245634	2066.800143812269	2209.6936119693864	0.9935986590442636	1.124727045313661	0.7841803366306607	0.871347895529252	1.1714366456714416	1.2116371167573434	0.9593223487983689	1.0452603780059995	0.9353333569038272	1.0	11.10963062933052														
RLS(ph)SSLNPSK	ddPTM_K562_Methotrexat_30min_R1	1	RLSSSLNPSK	10	1	A0A590UJ01;Q13535-2;Q13535-3;Q13535	A0A590UJ01	ATR	Serine/threonine-protein kinase ATR	1	RLS(0.983)S(0.012)S(0.005)LNPSK	96.82	0.0073042	10749000.0	1528.0	1168.5	1917.5	1878.3	1074.7	1154.5	1244.7	1321.3	1420.1	1896.6	True	False	1460.8309495755389	1361.5747638960177	1515.0429541879312	1713.6323552488802	1216.0418872654166	1377.590785619035	1523.8556596550038	1274.8291300800302	1354.0798609631088	1553.107361570241	0.9405859412697601	0.8766778122276249	0.9754914513161373	1.1033573065524223	0.7829734874451689	0.8869900560037568	0.9811656923152674	0.8208248583608138	0.8718520653936577	1.0	10.600941846938047	-7.7764996077505995	24.999345071444058	0.8860199959211399	0.9671791146358898	0.20216165630805116	0.08039038242667312	415.1340434420855	689102.0398252001	0.025423945889445763	0.028937290973915317	1.673017147446342e-08	7.7764996077505995	0.0811591187147499	
RLS(ph)STSLASGHSVR	ddPTM_K562_Methotrexat_30min_R1	3	RLSSTSLASGHSVR	14	1	M0QZ82;Q9BZL6-2;Q9BZL6;Q9BZL6-3	M0QZ82	PRKD2	Serine/threonine-protein kinase D2	1	RLS(0.964)S(0.034)T(0.002)SLASGHSVR;RLS(0.845)S(0.146)T(0.008)SLASGHSVR;RLS(0.892)S(0.108)T(0.001)SLASGHSVR	179.66	7.1009e-05	464551000.0	2005.08	1802.2099999999998	2438.88	2222.36	2013.67	2138.17	1888.1	2265.73	2099.82	2419.1000000000004	True	False	1916.939084015001	2099.994570167772	1926.9924172672038	2027.5291492364925	2278.502900465013	2551.341091456951	2311.554487824061	2186.0429916720113	2002.1998265245795	1980.9775484417228	0.9676733012561926	1.0600799447826506	0.9727482367394902	1.0234993076177912	1.1501911782177088	1.2879202459734527	1.1668756617874732	1.10351729800855	1.0107130331181948	1.0	10.951996814089215	-7.712774088414627	5.750669621848841	1.1358275099515962	1.0058220210040907	0.31365878322601637	0.08068241251112118	0.22558098329676268	16.733254707829975	0.02536239280699404	0.03239826539370591	1.9374295152118068e-08	7.712774088414627	-0.13000548894750552	
RLS(ph)TSPDVIQGHQPR	ddPTM_K562_Methotrexat_30min_R1	6	RLSTSPDVIQGHQPR	15	1	Q9Y385	Q9Y385	UBE2J1	Ubiquitin-conjugating enzyme E2 J1	1	RLS(0.755)T(0.239)S(0.006)PDVIQGHQPR;RLS(0.923)T(0.063)S(0.013)PDVIQGHQPR;RLS(0.93)T(0.06)S(0.01)PDVIQGHQPR;RLS(0.978)T(0.019)S(0.003)PDVIQGHQPR;RLS(0.998)T(0.002)SPDVIQGHQPR;RLS(0.998)T(0.002)SPDVIQGHQPR	189.84	4.1319e-09	1236813000.0	5652.15	5247.4	7292.12	5608.69	5610.0599999999995	5864.72	4846.74	6360.08	5945.21	6873.63	True	False	5403.688253693316	6114.443659450549	5761.603664715988	5116.984855752994	6347.881222733992	6997.994137926081	5933.744821946081	6136.3923814723385	5668.818484752118	5628.749000163479	0.9600158496206482	1.0862882070728261	1.0236028759762872	0.9090803046297461	1.12776057744796	1.243259228244648	1.054185365482409	1.0901876031946203	1.007118719379293	1.0	12.458598600962839	-7.7902945430595585	24.994313587776052	1.09775835062528	1.0033465158362067	0.24558777901891216	0.07736416727466736	304.226175267557	263518.55293027323	0.024821540423813553	0.028149538951139582	1.620710541696934e-08	7.7902945430595585	-0.09441183478907322	
RLS(ph)VGSSMR	ddPTM_K562_Methotrexat_30min_R1	1	RLSVGSSMR	9	1	Q8N370-4;Q8N370-2;Q8N370;Q8N370-3	Q8N370-4	SLC43A2	Large neutral amino acids transporter small subunit 4	1	RLS(0.998)VGS(0.001)SMR	64.945	0.02433	3347000.0	406.82	554.41	826.42	651.8	645.95	542.02	474.62	706.72	668.54	971.22	True	False	388.936679912514	646.0168291412845	652.9657356975179	594.657705984784	730.9037471658099	646.7576939118486	581.0656167634427	681.8642570272905	637.4597213212287	795.3226466857795	0.48903005784289866	0.8122701294038674	0.8210073464128266	0.7476936667939806	0.919002810006213	0.8132016567200471	0.7306036351219524	0.857342941092793	0.8015108383718386	1.0	9.635396441797612	-6.2606953033547645	5.188452079350145	0.8258718546290562	0.47404987243444613	0.6556152068176594	0.07480015976400643	0.09422495405120028	8.628916973094167	0.01751747616079289	0.11874661976625553	5.486617655013421e-07	6.2606953033547645	-0.3518219821946101	
RLS(ph)YNTASNK	ddPTM_K562_Methotrexat_30min_R1	3	RLSYNTASNK	10	1	P49207	P49207	RPL34	60S ribosomal protein L34	1	RLS(0.932)YNT(0.067)ASNK;RLS(0.999)YNT(0.001)ASNK;RLS(0.999)YNT(0.001)ASNK	140.24	5.9638999999999996e-05	34893200.0	8315.9	7442.700000000001	20730.2	8596.9	8183.299999999999	7271.1	7123.300000000001	9014.099999999999	7229.700000000001	8176.1	True	False	7950.34299317751	8672.479670730761	16379.214314944798	7843.223124548315	9259.547386302296	8676.13716874366	8720.881353274272	8697.068993759478	6893.592825015834	6695.329061971133	1.1874461911565695	1.2953029777116805	2.4463643479418007	1.1714469971456842	1.3829861535702095	1.2958492537765378	1.3025321492871937	1.2989755863021053	1.0296122507511722	1.0	12.708939247516758	-8.940558264902057	0.6204978773438911	1.0173301210808743	1.5601365881208076	0.21493874083061082	0.3427641350862666	1.285755679677209	0.9920638667180736	0.32691224474267966	0.2100479021432179	1.1466786728122992e-09	8.940558264902057	0.5428064670399333	
RLSELLR	ddPTM_K562_Methotrexat_30min_R1	1	RLSELLR	7	1	P08238	P08238	HSP90AB1	Heat shock protein HSP 90-beta	0		101.54	0.00020767	0.0	1551.0	1444.7	1805.0	1936.8	1559.7	1336.7	1340.1	1827.6	1653.2	1854.0	False	True	1482.8198971149613	1683.4121192987388	1426.1551667844685	1767.0037510759896	1764.8278883110358	1594.998356983077	1640.6515381245827	1763.3222721064594	1576.3430928414991	1518.2226343726811	0.9766814586634404	1.108804519960482	0.9393583882206747	1.1638633959676823	1.1624302314793575	1.0505694756962434	1.0806396249009214	1.1614385348925138	1.0382819075101148	1.0	10.568167649825286	-7.268339393534947	24.998346517050802	1.101114471736412	1.018333761560594	0.24800207306461064	0.06681251013125679	744.2617536378224	2696416.498904274	0.018044430514453636	0.02746169145800684	5.3908916910886085e-08	7.268339393534947	-0.082780710175818	
RLSGSS(ph)LCSGSWVSADGFLR	ddPTM_K562_Methotrexat_30min_R1	2	RLSGSSLCSGSWVSADGFLR	20	1	O75400-3;O75400;H0YG38;F5H578	O75400-3	PRPF40A	Pre-mRNA-processing factor 40 homolog A	1	RLS(0.032)GS(0.144)S(0.701)LCS(0.002)GS(0.112)WVS(0.009)ADGFLR;RLS(0.047)GS(0.413)S(0.524)LCS(0.016)GS(0.001)WVSADGFLR	76.118	0.005822399999999999	26395000.0	1847.3	1088.1399999999999	1310.8400000000001	2158.2	1347.22	1050.8600000000001	1430.1100000000001	2004.51	1987.6399999999999	2332.53	True	False	1766.0949038945635	1267.9366397824663	1035.7125976885052	1968.9939568216657	1524.4030439766568	1253.923822412836	1750.848571888179	1934.010247132916	1895.2350502392176	1910.0862143221739	0.924615282101961	0.6638112092926731	0.54223342900574	1.0308403579156746	0.7980807528719936	0.6564749868412677	0.9166332696189303	1.0125251062655474	0.9922248723792677	1.0	10.899422042382776	-8.956108226947643	5.838315165189385	0.9954759466637486	0.7677043193960164	0.39815090916660945	0.1301031070900118	0.19902722656970867	16.462469338116975	0.057820651069167714	0.03814910829773452	1.1063480457457845e-09	8.956108226947643	-0.22777162726773226	
RLSLPGLLSQVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	RLSLPGLLSQVSPR	14	1	Q96Q42-3;Q96Q42	Q96Q42-3	ALS2	Alsin	1	RLSLPGLLSQVS(1)PR;RLSLPGLLSQVS(1)PR	142.58	3.5745e-06	14852400.0	3821.2	3993.3	3864.3	4249.7	3729.2	3744.2	3569.3	4136.700000000001	4740.3	4852.5	True	False	3653.2246233756896	4653.124950505751	3053.236238784056	3877.1353990849007	4219.655165153241	4467.713659172617	4369.806383872902	3991.209916296118	4519.924487658209	3973.66522831361	0.9193589327418221	1.170990680682101	0.7683677570593493	0.9757076090504796	1.0619050480364767	1.1243306626181684	1.0996916279551339	1.0044152405838058	1.1374698742743425	1.0	11.95625461880078	-7.7601675406718025	4.854122179336682	1.0764863461172294	0.9589760123096673	0.23366748541255788	0.10029159973003836	0.2815763053096897	17.554866108383184	0.030437777588041885	0.037221515497658855	1.7371305550577333e-08	7.7601675406718025	-0.11751033380756204	
RLSQPES(ph)AEK	ddPTM_K562_Methotrexat_30min_R1	1	RLSQPESAEK	10	1	S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5	S4R3H4	ACIN1	Apoptotic chromatin condensation inducer in the nucleus	1	RLS(0.184)QPES(0.816)AEK	144.7	3.0975000000000003e-07	37945000.0	4357.9	3393.1	6292.4	4531.6	2829.9	2948.3	3454.2	4060.1	3955.9	4503.2	True	False	4166.331934002125	3953.7521021613857	4971.711230733843	4134.321663762885	3202.0814522865912	3518.0172483677757	4228.892278926896	3917.3039817134145	3771.9910724483943	3687.626843099817	1.1298138643821969	1.0721670793669198	1.3482142966924022	1.1211334117222056	0.8683312028380082	0.9540057598155817	1.1467787980879574	1.0622831833007624	1.022877648129294	1.0	11.84847695918021	-7.53245869443287	24.989032050720642	1.0143346219835956	1.1826750525392493	0.41960851943834665	0.09353347941524237	210.54188610438584	549189.5707801735	0.029128292370593202	0.037652720467021804	2.9345485943771582e-08	7.53245869443287	0.16834043055565373	
RLSS(ph)QDVLR	ddPTM_K562_Methotrexat_30min_R1	1	RLSSQDVLR	9	1	A0A3B3ITI3;A0A3B3IS53;A0A3F2YNX6;Q92794	A0A3B3ITI3	KAT6A	Histone acetyltransferase KAT6A	1	RLS(0.039)S(0.961)QDVLR	83.226	0.017334	11889000.0	1628.8	1269.4	2319.3	1804.3	1628.4	1488.1	1550.6	1918.5	1808.4	1709.6	True	False	1557.1999022700525	1479.1467738892636	1832.5106251098148	1646.1198203564682	1842.5631424797639	1775.6542642526508	1898.3615215401687	1851.0252675838485	1724.3278787167708	1399.9748736372908	1.1123056074744209	1.0565523722909935	1.308959653217738	1.1758209746148267	1.316140151638993	1.268347238003853	1.3559968520063606	1.322184635196115	1.2316848760555072	1.0	10.451185218972205	-6.758000642775709	24.99991775101499	1.2634247549898678	1.0844289345717533	0.2952242204319486	0.09824844561696958	88.42805388888584	642850.9201371144	0.023642373649008	0.05752744167529702	1.7458195690257305e-07	6.758000642775709	-0.17899582041811457	
RLTLEDLEDSWDR	ddPTM_K562_Methotrexat_30min_R1	4	RLTLEDLEDSWDR	13	1	Q6P2Q9;I3L3Z8	Q6P2Q9	PRPF8	Pre-mRNA-processing-splicing factor 8	0	;;;	188.09	2.7218000000000005e-07	61379600.0	6520.8	5912.54	7408.3	7089.1	6443.799999999999	6973.9	6610.900000000001	8470.2	7789.7	8621.5	False	True	6234.1534397854575	6889.486739003643	5853.399070409622	6467.609609537793	7291.272646469604	8321.507474948965	8093.562609796143	8172.298265044934	7427.5585472462035	7060.062805956885	0.8830167112005616	0.9758392989352277	0.8290859771772642	0.9160838631748129	1.0327489778586159	1.1786732928109	1.1463867719373897	1.15753903182697	1.0520527580830084	1.0	12.785465302356773	-7.895766989067465	3.141475903902415	1.11878022965077	0.8997956354885311	0.7215362542546131	0.060059529368847536	0.123797937459062	2.4415757301434855	0.019247703802999477	0.022215877908669288	1.2712559860640256e-08	7.895766989067465	-0.21898459416223892	
RLVT(ph)AY(ph)QRS(ph)Y(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	RLVTAYQRSYK	11	2	H0YJG4;Q9HCK8-2;Q9HCK8;A0A2R8Y840	H0YJG4	CHD8	Chromodomain-helicase-DNA-binding protein 8	4	RLVT(1)AY(1)QRS(1)Y(1)K	50.158	0.031682999999999996	6121300.0	0.0	0.0	142.17	0.0	51.851000000000006	55.185	0.0	0.0	0.0	0.0	True	False	0.0	0.0	112.3304598680043	0.0	58.670315340652365	65.84872022900511	0.0	0.0	0.0	0.0											0.0														
RLVWT(ph)PS(ph)QSEALRACFERNPYPGIATR	ddPTM_K562_Methotrexat_30min_R1	1	RLVWTPSQSEALRACFERNPYPGIATR	27	3	A0A1B0GW55;Q9UBX2-2;Q6RFH8;P0CJ87;Q9UBX2;P0CJ90;P0CJ89;P0CJ88;P0CJ86;P0CJ85	A0A1B0GW55	DUX4;DUX4L9;DUX4L4;DUX4L7;DUX4L6;DUX4L5;DUX4L3;DUX4L2	Double homeobox protein 4;Double homeobox protein 4C;Double homeobox protein 4-like protein 4;Double homeobox protein 4-like protein 7;Double homeobox protein 4-like protein 6;Double homeobox protein 4-like protein 5;Double homeobox protein 4-like protein 3;Double homeobox protein 4-like protein 2	2	RLVWT(0.991)PS(0.99)QS(0.019)EALRACFERNPYPGIATR	48.867	0.020562	38169000.0	1298.7	1568.4	2002.4	1622.5	1623.3	1464.9	1461.9	1061.9	933.8	1022.9	True	False	1241.6107030194723	1827.5514417582497	1582.1236044150803	1480.2579440937595	1836.7924030873253	1747.9711925970744	1789.7682886234816	1024.5523751093501	890.3878418191333	837.6428978963404	1.482267331505655	2.1817787106510056	1.8887805392828276	1.767170649702021	2.192810811982353	2.0867737277865497	2.136672194222995	1.2231374225011815	1.0629682935953457	1.0	9.710191518143672	-9.351393576680717	4.614629471855199	1.0697931869072521	1.9734800608883891	0.7852668749547732	0.20857653321829867	0.10091778296119973	3.6924507596297764	0.1200608360866565	0.05501353759737877	4.4525255813489354e-10	9.351393576680717	0.903686873981137	
RMALS(ph)MIE	ddPTM_K562_Methotrexat_30min_R1	1	RMALSMIE	8	1	J3KQ07	J3KQ07	ANKMY1		1	RMALS(1)MIE	53.553999999999995	0.030594999999999997	2320900.0	204.01	180.94	176.54	251.29	161.6	184.95	143.05	233.22	285.38	332.38	True	False	195.04196467467665	210.83725954586689	139.48666656184483	229.25979585289429	182.85323251334432	220.6889699439068	175.13260393158845	225.01752040964556	272.11274608946684	272.18276117194813	0.7165845619130202	0.7746165063432251	0.5124742873547595	0.8423009409771628	0.6718031359738799	0.8108117097264997	0.6434375313760249	0.8267148126530082	0.9997427644492258	1.0	8.088431885715408	-9.613349555603817	3.1082398472139037	1.0041581047299863	0.7128234951599004	0.6294647523418059	0.0881432783087937	0.15751100685026895	2.888009020193504	0.06901482130076732	0.02212318963040023	2.435849458922521e-10	9.613349555603817	-0.29133460957008595	
RMEDEGGFPVPQENGQPES(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	RMEDEGGFPVPQENGQPESPR	21	1	J3KPS2;A0A494C1T9;Q6ZRV2	J3KPS2	FAM83H	Protein FAM83H	1	RMEDEGGFPVPQENGQPES(1)PR	114.05	9.1291e-06	18189000.0	725.34	735.08	886.18	810.43	639.24	730.07	643.79	1044.6	743.57	856.14	True	False	693.4549220975933	856.5394757763673	700.1829283662377	739.3808601737475	723.3112645534046	871.1456949821467	788.1762955967654	1007.8608259150836	709.0015929979146	701.0847498337793	0.9891171106802781	1.2217345705771592	0.9987136769588051	1.054624081252727	1.031703035510179	1.242568313158555	1.1242239911560403	1.43757345478423	1.0112922769551218	1.0	9.453445043104043	-8.255244792303953	24.817120196624888	1.188048222628788	1.064597206264845	0.12150235326191905	0.13108209057318773	798.7276021759307	3199913.01187658	0.04147117224137418	0.04046663779223043	5.555910072859138e-09	8.255244792303953	-0.12345101636394307	
RMEELHNQEMQK	ddPTM_K562_Methotrexat_30min_R1	3	RMEELHNQEMQK	12	1	P23246-2;P23246;H0Y9K7	P23246-2	SFPQ	Splicing factor, proline- and glutamine-rich	0	;;	63.966	0.025491	21793700.0	4748.200000000001	4063.6000000000004	6120.5	4897.0	3404.9100000000003	3929.2999999999997	3572.8599999999997	4167.63	4125.47	6203.799999999999	False	True	4539.474813334147	4735.040830610065	4835.890691581348	4467.687613082984	3852.7153460211107	4688.581614493607	4374.164804495037	4021.0520906648303	3933.6778001601824	5080.231703948889	0.893556648175238	0.9320521398521046	0.951903569245156	0.8794259540584003	0.7583739424771465	0.9229070419857326	0.8610167920283985	0.7915095855843045	0.7743107065574422	1.0	12.310678582941982	-7.519285008092296	24.908958977587478	0.842617615327872	0.9246599048054099	0.18244695831314095	0.06906031610913019	208.3031483469332	1443801.1903974602	0.01968807698054564	0.02599629878326773	3.024927651524639e-08	7.519285008092296	0.08204228947753789	
RMGESDDSILR	ddPTM_K562_Methotrexat_30min_R1	2	RMGESDDSILR	11	1	Q8WVC2;P63220	Q8WVC2	RPS21	40S ribosomal protein S21	0	;	87.641	0.01825	87843000.0	3456.7	3043.2	3234.4	3762.6000000000004	3040.9	3244.2999999999997	3497.2999999999997	3516.2	3488.3999999999996	3692.2	False	True	3304.7476069357112	3546.0370744444663	2555.543640691237	3432.7386998133634	3440.8316506796327	3871.215059145804	4281.6585510656705	3392.533252998866	3326.225045407864	3023.5068018504912	1.0930180824839193	1.1728225887483263	0.8452250344292779	1.135350083456868	1.138026760374319	1.2803725319144266	1.4161233401046582	1.1220524626974604	1.100121568561413	1.0	11.562007109222888	-7.706239627380095	2.884494099234523	1.202962097397883	1.0457454985848265	0.15848950544726004	0.13189426128749437	0.4200760970800498	7.1151013763972815	0.04311565397154195	0.05581311178299305	1.9668007834775385e-08	7.706239627380095	-0.1572165988130565	
RMS(ph)ADMSEIEAR	ddPTM_K562_Methotrexat_30min_R1	1	RMSADMSEIEAR	12	1	Q9UG54;O43318-4;O43318-2;O43318-3;O43318	Q9UG54	DKFZp586F0420;MAP3K7	Mitogen-activated protein kinase kinase kinase 7	1	RMS(0.973)ADMS(0.027)EIEAR	49.483000000000004	0.032933	5135800.0	2519.8	2345.2	2487.2	2844.7	2294.3	2270.3	2242.4	2452.8	2594.6	2804.5	True	False	2409.032609123327	2732.704438415868	1965.1707095990737	2595.309567681676	2596.040664327762	2709.003343950536	2745.315281762977	2366.533633739726	2473.9776123194724	2296.5778738393665	1.0489662190709699	1.1899027982218584	0.8556952202599366	1.1300768840652884	1.1303952258269216	1.1795826193438352	1.1953939437609498	1.0304608699305324	1.077245252817634	1.0	11.16526998888154	-5.944293247117091	16.691194067907514	1.0919627476535998	0.683179142131095	0.01173651759763461	0.09958706121573498	39851123.01302424	257664655.00448242	0.024974694102366305	548150897.0089948	1.1368593890820148e-06	5.944293247117091	-0.4087836055225048	
RMS(ph)GEPIQTVESIR	ddPTM_K562_Methotrexat_30min_R1	1	RMSGEPIQTVESIR	14	1	Q5VT52-2;Q5VT52-3;Q5VT52	Q5VT52-2	RPRD2	Regulation of nuclear pre-mRNA domain-containing protein 2	1	RMS(1)GEPIQTVESIR	155.37	7.5863e-08	26194000.0	4448.7	4305.8	5111.6	4402.5	4524.1	3708.6	3413.3	4517.4	4483.9	4909.9	True	False	4253.140474722975	5017.260263913972	4038.7450141470817	4016.5396603222025	5119.098448104092	4425.234463011477	4178.819412790569	4358.520481513307	4275.444467694165	4020.669532096238	1.0578189629291754	1.2478668599501004	1.0044956398198237	0.9989728397867401	1.2731955230936802	1.1006212840139369	1.0393342152176026	1.084028529756069	1.0633662959773509	1.0	11.973220047311536	-9.898136304682163	0.707546665236152	1.0022411508521292	1.1130101502111902	0.12620282140224226	0.08696293583650237	1.5582050474023024	1.8114956117870977	0.08717120670585082	0.035371025966100485	1.2643394682949598e-10	9.898136304682163	0.11076899935906104	
RNDGQASSS(ph)PPSESMGQAK	ddPTM_K562_Methotrexat_30min_R1	1	RNDGQASSSPPSESMGQAK	19	1	Q5VYV7	Q5VYV7	SLX4IP	Protein SLX4IP	1	RNDGQAS(0.019)S(0.258)S(0.716)PPS(0.003)ES(0.004)MGQAK	46.818000000000005	0.030933	3324500.0	548.76	549.93	856.16	841.45	678.47	704.58	525.01	880.25	812.47	830.58	True	False	524.6371674666709	640.7965852882649	676.4637161186649	767.6813849354045	767.7006971740644	840.7301132364306	642.7568569739476	849.2911085695509	774.6984470366154	680.1539135152433	0.771350656140734	0.9421346735717983	0.9945744671562554	1.128687742113829	1.128716136038022	1.2360880332089548	0.9450167737063861	1.2486748832777494	1.139004615929852	1.0	9.409717443695278	-6.495168439852437	1.1087725059031985	1.1288622303360305	0.687459528084487	0.6002503451682335	0.08945201199232203	0.7532645933851326	1.0253349202421926	0.027790756601816718	0.35548358254282764	3.197654668087759e-07	6.495168439852437	-0.44140270225154354	
RNDSGDHS(ph)DHMHYYQGK	ddPTM_K562_Methotrexat_30min_R1	1	RNDSGDHSDHMHYYQGK	17	1	P78332;E9PGM9;P78332-2;F8WCA5	P78332	RBM6	RNA-binding protein 6	1	RNDS(0.421)GDHS(0.579)DHMHYYQGK	55.885	0.025065999999999998	5682900.0	6638.7	5535.2	9388.4	7306.3	5697.2	5066.5	4597.5	6166.6	6768.0	8378.2	True	False	6346.870696954928	6449.797717686985	7417.903140077171	6665.7680227625515	6446.481660117732	6045.529419955681	5628.606407378382	5949.717182737849	6453.357157241266	6860.826793582088	0.9250883148503418	0.9400904456180709	1.0811966783677145	0.9715692034374046	0.9396071135548922	0.8811663086453267	0.820397683358458	0.8672011933464739	0.9406092518292422	1.0	12.744166729737348	-7.991229346945451	2.892405854244048	0.8890505252011233	0.9836879414792272	0.261404096964436	0.0593634454526427	0.31456449063598885	5.36645506339904	0.02075470371667267	0.022682078828418085	1.0204004772347718e-08	7.991229346945451	0.09463741627810396	
RNEES(ph)DDDLDFDIDLEDTGGDHQMN	ddPTM_K562_Methotrexat_30min_R1	1	RNEESDDDLDFDIDLEDTGGDHQMN	25	1	Q96MD7-1	Q96MD7-1			1	RNEES(1)DDDLDFDIDLEDTGGDHQMN	50.486999999999995	0.010198	16771000.0	1452.3	1228.1	1931.1	2085.3	1197.8	1215.1	1356.0	1955.9	1464.8	1904.0	True	False	1388.4586309349183	1431.0226508692333	1525.7885000429283	1902.4849866371137	1355.33169495349	1449.900877960752	1660.117517869514	1887.1098883853267	1396.7017677197116	1559.1671498627743	0.8905130094981283	0.9178122121128455	0.9785920003363439	1.2201930927062923	0.8692664510490589	0.9299201038762015	1.0647463410293274	1.2103319958680603	0.8957998940925855	1.0	10.606559884507698	-6.863859176139043	4.087178979477456	1.0312800511556888	0.9033916832070235	0.1559793026339812	0.11211420130382484	0.38530539745151915	11.644127668308546	0.030345964282436695	0.06989117530716099	1.3681723957836725e-07	6.863859176139043	-0.12788836794866532	
RNGS(ph)PTPAGSLGGGAVATAGGPGSR	ddPTM_K562_Methotrexat_30min_R1	2	RNGSPTPAGSLGGGAVATAGGPGSR	25	1	Q6P1L5-2;Q6P1L5	Q6P1L5-2	FAM117B	Protein FAM117B	1	RNGS(0.985)PT(0.015)PAGSLGGGAVATAGGPGSR;RNGS(0.954)PT(0.045)PAGSLGGGAVATAGGPGSR	97.589	1.7998e-06	21845000.0	3913.2	2940.1	4411.4	3701.3999999999996	3307.1	3310.5	3252.6	3726.8	3509.6	4506.299999999999	True	False	3741.1804135333778	3425.9015518448286	3485.507425347924	3376.904008794231	3742.0416166143655	3950.207272231973	3982.078347066653	3595.72633162965	3346.4394620351577	3690.165403060202	1.0138245864076634	0.9283869901885093	0.9445396194049843	0.9151091184134489	1.0140579643154053	1.0704688925206771	1.0791056530323468	0.9744079028673795	0.9068535137368104	1.0	11.84946976783846	-7.780876541996659	24.542605491131432	1.0129332376075824	0.948464831031756	0.22372728790784746	0.05137880283203321	288.95031494105126	364845.15563465026	0.01724349520509331	0.01958167665007568	1.656240720341134e-08	7.780876541996659	-0.06446840657582631	
RNLLEDDS(ph)DEEEDFFLR	ddPTM_K562_Methotrexat_30min_R1	2	RNLLEDDSDEEEDFFLR	17	1	O75379	O75379	VAMP4	Vesicle-associated membrane protein 4	1	RNLLEDDS(1)DEEEDFFLR;RNLLEDDS(1)DEEEDFFLR	135.23	4.9595e-06	21042000.0	1839.5	1810.8899999999999	2567.3	2184.8	1844.58	1811.59	1753.27	1947.6299999999999	2011.31	2500.0	True	False	1758.6377825551087	2110.1087926329983	2028.4588142303405	1993.26197612083	2087.17460166748	2161.654128470842	2146.4854281379676	1879.1307489728058	1917.8046371056334	2047.2257745046932	0.8590346040268052	1.0307162106453642	0.990832979680078	0.9736405241395912	1.0195136401955727	1.0558943499985163	1.0484849569937098	0.9178913104625422	0.9367821864052235	1.0	10.999454500749204	-4.46366743059102	16.7202150976762	0.9870928497251249	0.5005327723744677	0.0	0.05961310332698748	0.0	0.0	0.013855692069721915	0.0	3.438211348083391e-05	4.46366743059102	-0.4865600773506572	
RNLLEDDS(ph)DEEEDFFLRGPSGPR	ddPTM_K562_Methotrexat_30min_R1	3	RNLLEDDSDEEEDFFLRGPSGPR	23	2	O75379	O75379	VAMP4	Vesicle-associated membrane protein 4	1	RNLLEDDS(1)DEEEDFFLRGPSGPR;RNLLEDDS(1)DEEEDFFLRGPSGPR;RNLLEDDS(0.999)DEEEDFFLRGPS(0.001)GPR	103.74	4.212e-05	92569000.0	614.4100000000001	684.51	926.11	866.4499999999999	945.64	710.19	571.8	691.5699999999999	626.202	906.0999999999999	True	False	587.4012720737611	797.613642819395	731.7321670419747	790.4896737504091	1070.008235110884	847.4241663393526	700.0407055440913	667.2470911143922	597.0900057001762	741.9965097114808	0.7916496430719967	1.0749560575824546	0.98616658901334	1.065354975938882	1.4420663993782772	1.142086458963084	0.9434555235526597	0.8992590697951472	0.8047072969822321	1.0	9.535268590321907	-8.890454774422793	4.81056014278456	0.8948977990903008	1.093736259864382	0.22346992544892008	0.1572277094576093	0.3289735371134394	12.47199607258194	0.07300705885665904	0.04843777529209677	1.2869012584669016e-09	8.890454774422793	0.1988384607740813	
RNMAYRARSK	ddPTM_K562_Methotrexat_30min_R1	1	RNMAYRARSK	10	3	Q7Z2W4-2;Q7Z2W4;C9J6P4;Q7Z2W4-3	Q7Z2W4-2	ZC3HAV1	Zinc finger CCCH-type antiviral protein 1	0		52.716	0.03362	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	False	True	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
RNS(ph)EGSELSCTEGSLTSSLDSR	ddPTM_K562_Methotrexat_30min_R1	2	RNSEGSELSCTEGSLTSSLDSR	22	1	A0A087WW76;A0A452Q6Z5;Q5T5U3	A0A087WW76	ARHGAP21	Rho GTPase-activating protein 21	1	RNS(0.989)EGS(0.011)ELSCTEGSLTSSLDSR;RNS(0.952)EGS(0.048)ELSCTEGSLTSSLDSR	119.29	2.3263e-06	36997000.0	722.45	683.95	1118.71	806.23	671.39	799.9599999999999	520.5	1037.48	852.95	724.83	True	False	690.691963037205	796.9611123377675	883.9080590767044	735.5490676528268	759.689553076326	954.5409483445671	637.2353746689394	1000.9912403507386	813.2965406721248	593.5562632536949	1.163650366101845	1.3426884049189696	1.4891731648679594	1.2392238330040872	1.2798947633235962	1.6081726492313704	1.0735888307804367	1.6864302549241232	1.3702096852855712	1.0	9.213240979321567	-6.274717009597982	4.869544392657741	1.3647728767573404	1.1547688014261699	0.056813389340939824	0.20472873374806388	0.42208525240011596	29.1715199513012	0.04763891708466236	0.2923340480701495	5.312304862981448e-07	6.274717009597982	-0.2100040753311705	
RNS(ph)FSENEK	ddPTM_K562_Methotrexat_30min_R1	3	RNSFSENEK	9	1	Q9HCG8	Q9HCG8	CWC22	Pre-mRNA-splicing factor CWC22 homolog	1	RNS(0.999)FS(0.001)ENEK;RNS(1)FSENEK;RNS(0.982)FS(0.018)ENEK	107.34	0.0037799	86264000.0	7245.0	5872.0	11218.5	7953.700000000001	5618.599999999999	4322.0	4048.7	5115.7	6093.3	6446.599999999999	True	False	6926.518474918053	6842.248193065828	8863.890159873437	7256.411469915893	6357.544382422505	5157.165331698112	4956.724037314381	4935.777931393639	5810.0238129755	5279.058271168785	1.312074638907996	1.2961115111068764	1.679066550237372	1.374565518540738	1.2042951708155596	0.9769100977467169	0.938940959296697	0.9349731860983714	1.1005795947937431	1.0	12.366064875478784	-7.98114096482242	2.4331102364090955	0.9827249271720936	1.4285497497538522	0.7782029269083395	0.10703279509013423	0.13800630614720655	1.649183779359262	0.03938864223863568	0.04349258715745165	1.0443811753038469e-08	7.98114096482242	0.4458248225817586	
RNS(ph)FTPLSSSNTIR	ddPTM_K562_Methotrexat_30min_R1	3	RNSFTPLSSSNTIR	14	1	O60825	O60825	PFKFB2	6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase	1	RNS(0.987)FT(0.013)PLSSSNTIR;RNS(0.998)FT(0.002)PLSSSNTIR;RNS(0.987)FT(0.011)PLS(0.001)SSNT(0.001)IR	83.37	0.024036000000000002	103237700.0	4414.5	2873.37	4192.7	4313.2	3412.7000000000003	3240.3900000000003	2887.96	4343.9	4040.0499999999997	5619.2	True	False	4220.44386577305	3348.1455535608893	3312.709566635589	3935.068452675012	3861.5298675636764	3866.5495069831663	3535.658544916253	4191.122574854044	3852.228957315689	4601.5084288387125	0.9171870335654623	0.7276191286703487	0.7199181785420788	0.8551692371164709	0.8391878287916588	0.8402786970356526	0.7683694596227331	0.9108149294234286	0.8371665545960719	1.0	12.167891155847752	-10.896621460665326	0.3714889841953595	1.0332959354706848	0.7941967396859064	0.4402178145736426	0.06213404570817907	3.7858075308885155	0.7769577730181652	0.2588062688567899	0.05114061294810191	1.2687572570164442e-11	10.896621460665326	-0.23909919578477834	
RNS(ph)LPQIPMLNLEAR	ddPTM_K562_Methotrexat_30min_R1	1	RNSLPQIPMLNLEAR	15	1	Q14289;H0YB74;Q14289-2	Q14289	PTK2B	Protein-tyrosine kinase 2-beta	1	RNS(1)LPQIPMLNLEAR	83.823	0.008661	0.0	1424.1	1108.1	1188.2	1394.3	1238.3	1266.4	1117.6	1510.5	1648.3	1892.6	True	False	1361.4982691691923	1291.1946905204768	938.8130577137422	1272.0638837904035	1401.158154834618	1511.113876923296	1368.2502492411268	1457.374858840449	1571.6708927719815	1549.8318003310328	0.8784813093126532	0.8331192392907972	0.6057515773732469	0.8207754438376473	0.9040711092231691	0.975017983629277	0.8828378982473314	0.9403438866909068	1.0140912661853267	1.0	10.597895936293515	-7.779899663078365	3.055762840153398	0.9519884192143988	0.7707370915486298	0.560621223463273	0.07448239103271193	0.19934061744783838	3.8342038873139743	0.024882572837302278	0.030661772054817044	1.6599703732322357e-08	7.779899663078365	-0.181251327665769	
RNS(ph)LSGSSTGSQEQR	ddPTM_K562_Methotrexat_30min_R1	2	RNSLSGSSTGSQEQR	15	1	Q96J92-2;Q96J92	Q96J92-2	WNK4	Serine/threonine-protein kinase WNK4	1	RNS(0.992)LS(0.007)GSSTGSQEQR;RNS(0.951)LS(0.044)GS(0.002)S(0.001)T(0.002)GSQEQR	105.06	0.0011354000000000002	3752600.0	432.62	505.92	705.5	565.69	337.67	374.08000000000004	476.49	472.08000000000004	565.31	726.37	True	False	413.60254280456166	589.5146808303583	557.4251912279459	516.0968359903849	382.07952365582315	446.3656657292062	583.3550118655196	455.47667882250863	539.0288614893705	594.8173543307897	0.6953437719884499	0.9910852071449777	0.9371367314174742	0.8676559825175733	0.6423476397821123	0.7504247522021246	0.9807296435085253	0.765742081172045	0.9062090363785953	1.0	9.216302929703264	-11.949182598834742	6.800296564194902	1.0000000114665635	0.8395631345929819	0.1537484018201123	0.1143358158773719	2.0343378401228354e-08	3.102994055720599e-09	0.11328662510917328	0.027476040381986325	1.1241322339197204e-12	11.949182598834742	-0.16043687687358155	
RNS(ph)LTGEEGQLAR	ddPTM_K562_Methotrexat_30min_R1	3	RNSLTGEEGQLAR	13	1	Q9BX95	Q9BX95	SGPP1	Sphingosine-1-phosphate phosphatase 1	1	RNS(1)LTGEEGQLAR;RNS(1)LTGEEGQLAR;RNS(0.99)LT(0.01)GEEGQLAR	155.06	6.3996e-08	217394000.0	3340.31	2542.07	3919.9399999999996	3921.62	3076.04	2750.08	2516.02	3025.74	2974.32	3623.16	True	False	3193.4739719742615	2962.103859698032	3097.198163149642	3577.817663307841	3480.593176611065	3281.4940387312217	3080.3015319395686	2919.32300919424	2836.0445124003904	2966.970614861772	1.0763416246786934	0.998359688788503	1.043892429414552	1.2058824059079964	1.173113464345255	1.10600827062256	1.0381975192171145	0.9839406546769079	0.9558721270087532	1.0	11.534774922972302	-9.021859451717946	2.7003349494723463	0.9772624666482498	1.101244540282408	0.48093785924179944	0.05635647394830396	0.28602771572048336	4.15535678141299	0.03467141200233676	0.01924603921112899	9.50912482327494e-10	9.021859451717946	0.12398207363415825	
RNS(ph)LVNVELWT(ph)IIQK	ddPTM_K562_Methotrexat_30min_R1	1	RNSLVNVELWTIIQK	15	1	F8WD60;Q8IYW5	F8WD60	RNF168	E3 ubiquitin-protein ligase RNF168	2	RNS(1)LVNVELWT(1)IIQK	54.763999999999996	0.028026	15114000.0	1559.6	1355.9	1783.1	1626.7	1586.9	1359.9	1524.7	1616.2	1306.1	1425.0	True	False	1491.0418514123114	1579.939428640659	1408.8516775032608	1484.0897366146805	1795.6051650707075	1622.6814286386525	1866.6527872386773	1559.3573299291202	1245.3796960804993	1166.918691467676	1.2777598493490356	1.3539413158713842	1.2073263439899973	1.2718021807912658	1.5387577371070387	1.390569403424113	1.5996425465521684	1.3363033271562905	1.067237764881579	1.0	10.188488325139222	-9.778454053490034	3.9763647912197007	1.0098393258460285	1.3786019991805987	0.5952992074497307	0.11256452717098571	0.15431316587625465	5.062834717891002	0.1103204871307632	0.031240555971650527	1.6655050218156883e-10	9.778454053490034	0.36876267333457013	
RNS(ph)NS(ph)PPSPSS(ph)MNQR	ddPTM_K562_Methotrexat_30min_R1	1	RNSNSPPSPSSMNQR	15	1	Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3	Q7Z5L9	IRF2BP2	Interferon regulatory factor 2-binding protein 2	3	RNS(0.907)NS(0.554)PPS(0.553)PS(0.222)S(0.764)MNQR	65.652	0.031396	1912200.0	1003.4	821.68	1562.4	1042.1	764.41	885.87	882.7	1021.5	1226.9	1303.1	True	False	959.2917374372362	957.4486538280528	1234.4735914593086	950.740710964627	864.9433135242915	1057.051839979501	1080.6679447075367	985.5732660082888	1169.8616867936325	1067.0959627028271	0.8989741981662683	0.897247002418554	1.1568533989506753	0.8909608359462948	0.8105581351216933	0.9905874231799308	1.012718614331867	0.9236032188819728	1.0963041072993212	1.0	10.059474206550945	-9.753641545778843	24.999211632557973	1.0481520633379755	0.950114458506959	0.16409340988569387	0.09056701665633766	300.53530332052634	963513.077307169	0.06561534293716616	0.023775139820933523	1.7634309312805017e-10	9.753641545778843	-0.09803760483101653	
RNS(ph)RTEEPTVASESVENGHR	ddPTM_K562_Methotrexat_30min_R1	1	RNSRTEEPTVASESVENGHR	20	2	A0A0D9SFT8;F6M2K2;Q14686	A0A0D9SFT8	NCOA6	Nuclear receptor coactivator 6	1	RNS(0.5)RT(0.5)EEPTVASESVENGHR	134.93	2.1647e-08	15140000.0	2382.8	1975.0	3038.3	2686.2	1998.6	1638.4	2001.1	2325.8	2222.0	2478.5	True	False	2278.054965084161	2301.335180739953	2400.602350826178	2450.70501659455	2261.450931319122	1954.9976120902788	2449.8976143131895	2244.0002957240117	2118.699704992626	2029.6196328439546	1.1224048724302556	1.1338751081724923	1.1827843562305282	1.2074700978136284	1.114224012580288	0.9632334948154234	1.207072288160876	1.1056260293361775	1.0438900327466039	1.0	10.986993664670083	-7.996895854705653	24.92447335092935	1.074978965768593	1.1611223206485286	0.3277413433833123	0.06505545118332087	124.32492917250867	998238.9946308653	0.02048990392495369	0.023107230062183105	1.007173163446302e-08	7.996895854705653	0.08614335487993552	
RNS(ph)SEASSGDFLDLK	ddPTM_K562_Methotrexat_30min_R1	6	RNSSEASSGDFLDLK	15	1	J3KSH8;J3KT51;Q9UK76-3;Q9UK76;Q9UK76-2	J3KSH8	HN1	Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed	1	RNS(0.991)S(0.009)EASSGDFLDLK;RNS(0.661)S(0.339)EASSGDFLDLK;RNS(0.965)S(0.033)EAS(0.001)S(0.001)GDFLDLK;RNS(0.964)S(0.036)EASSGDFLDLK;RNS(0.996)S(0.004)EASSGDFLDLK;RNS(0.701)S(0.299)EASSGDFLDLK	247.44	2.4931999999999996e-63	323302900.0	17218.1	11575.630000000001	24965.1	15871.1	14109.980000000001	11138.859999999999	10121.189999999999	16373.199999999999	16598.7	20194.4	True	False	16461.212940370813	13488.306105432312	19725.266678277523	14479.705304472394	15965.689688729202	13291.28704919916	12391.12449903078	15797.345275581902	15827.030059973495	16536.998472263036	0.9954172135881045	0.8156441525985386	1.1927960634066734	0.8755945239251687	0.9654526917631352	0.8037303185032156	0.749297069828845	0.9552728266909059	0.9570678794292478	1.0	14.01340978321587														
RNS(ph)SS(ph)PVSPASVPGQR	ddPTM_K562_Methotrexat_30min_R1	2	RNSSSPVSPASVPGQR	16	1	Q9H1B7	Q9H1B7	IRF2BPL	Interferon regulatory factor 2-binding protein-like	2	RNS(0.949)S(0.1)S(0.918)PVS(0.033)PASVPGQR;RNS(0.998)S(0.038)S(0.726)PVS(0.237)PAS(0.001)VPGQR	179.66	2.2373e-67	17713000.0	6726.5	5784.200000000001	8016.5	6994.700000000001	6128.0	6061.4	5294.4	6655.8	6172.9	7630.9	True	False	6430.811114083682	6739.940735410652	6333.946201954396	6381.485510972339	6933.939411149594	7232.679764357916	6481.803972425041	6421.711741456645	5885.923226349673	6248.870065067144	1.0291158316818967	1.078585514697885	1.0136146432877282	1.0212223081171987	1.1096309155013753	1.157438015040596	1.0372761643197	1.0276596688024817	0.9419180051852188	1.0	12.60937962661295	-9.463175780116035	2.6714524816766585	0.972717929056193	1.0664074022548746	0.40774014635942535	0.04397345956510743	0.30313336831731447	4.0977001528197885	0.035826166914636755	0.012997442225040687	3.442105837873392e-10	9.463175780116035	0.0936894731986816	
RNS(ph)SSPVSPASVPGQR	ddPTM_K562_Methotrexat_30min_R1	1	RNSSSPVSPASVPGQR	16	1	Q9H1B7	Q9H1B7	IRF2BPL	Interferon regulatory factor 2-binding protein-like	1	RNS(0.756)S(0.221)S(0.022)PVSPASVPGQR	218.34	3.5511e-30	10833000.0	1458.3	1567.5	2067.8	1965.7	1675.1	1500.0	1619.1	1746.6	2064.2	1645.5	True	False	1394.1948781191165	1826.5027320556337	1633.7970381589603	1793.3701329461346	1895.4050110340534	1789.853770834605	1982.2243902526018	1685.1710880176956	1968.2357925498543	1347.48400477899	1.034665252555475	1.355491215908875	1.212479726931475	1.3309027243260505	1.4066252395663363	1.3282931481833589	1.4710559704029436	1.2506056339378158	1.4606746986007288	1.0	10.396052432324105	-6.25790560777907	24.487962269274554	1.3265108637371277	1.0346651033115772	0.28389244868810815	0.13097630134927468	302.1753889884981	2093859.5416786792	0.029857033123608767	0.21139218108197355	5.521974442114016e-07	6.25790560777907	-0.29184576042555044	
RNS(ph)VERPAEPVAGAATPSLVEQQK	ddPTM_K562_Methotrexat_30min_R1	1	RNSVERPAEPVAGAATPSLVEQQK	24	2	Q9BTC0	Q9BTC0	DIDO1	Death-inducer obliterator 1	1	RNS(1)VERPAEPVAGAATPSLVEQQK	67.86399999999999	0.0020159	52637000.0	2185.2	1677.9	3844.5	2783.1	1769.6	1698.3	1566.4	2119.1	2349.5	2972.1	True	False	2089.1412244846	1955.14445557649	3037.591988201046	2539.109944041506	2002.3334174233546	2026.472439338939	1917.7050737395336	2044.5700518826854	2240.272257821862	2433.823889762161	0.8583781403710176	0.8033220742884364	1.2480738647437168	1.0432595204288317	0.8227108895783858	0.8326290360873114	0.7879391281375484	0.8400649120436096	0.9204742657205105	1.0	11.249009063823479	-7.7661247287781645	24.989683891013325	0.8536043781036572	0.9936069146441618	0.18076794007023	0.12389788156832493	190.74322641074957	1017342.8937246206	0.040226024177359085	0.047106589772307	1.7134651320053863e-08	7.7661247287781645	0.14000253654050465	
RNSEGSELSCTEGS(ph)LTSSLDSRR	ddPTM_K562_Methotrexat_30min_R1	1	RNSEGSELSCTEGSLTSSLDSRR	23	2	A0A087WW76;A0A452Q6Z5;Q5T5U3	A0A087WW76	ARHGAP21	Rho GTPase-activating protein 21	1	RNSEGSELSCTEGS(0.2)LT(0.2)S(0.2)S(0.2)LDS(0.2)RR	56.148999999999994	0.010502	19442000.0	0.0	64.545	64.503	0.0	0.0	0.0	0.0	0.0	52.773	0.0	True	False	0.0	75.2099641725875	50.96470178565015	0.0	0.0	0.0	0.0	0.0	50.319594748684	0.0											0.0														
RNSNS(ph)PPSPSS(ph)MNQR	ddPTM_K562_Methotrexat_30min_R1	1	RNSNSPPSPSSMNQR	15	1	Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3	Q7Z5L9	IRF2BP2	Interferon regulatory factor 2-binding protein 2	2	RNS(0.313)NS(0.687)PPS(0.032)PS(0.032)S(0.936)MNQR	55.336999999999996	0.031865	7136900.0	887.42	850.43	1456.2	1569.4	967.89	1076.3	800.02	1054.1	1241.6	1294.3	True	False	848.410079366705	990.9491026616093	1150.563520150439	1431.8131386506907	1095.1845001073077	1284.2797423661907	979.4448500339	1017.0267055304317	1183.87828700218	1059.8897279765704	0.8004701404045117	0.9349549075764937	1.0855502131782835	1.350907647141894	1.0333004190899353	1.2117107171309247	0.9241007098953141	0.959558979283658	1.116982508418414	1.0	10.049698457774193	-6.557897963207711	2.964902421907757	1.089981685312928	0.8123119983980102	0.3749661948511913	0.11834482046778169	0.29128291121156624	4.877930718283728	0.03274835639908604	0.13772063515206312	2.76759181028992e-07	6.557897963207711	-0.2776696869149179	
RNSS(ph)SPVSPASVPGQR	ddPTM_K562_Methotrexat_30min_R1	1	RNSSSPVSPASVPGQR	16	1	Q9H1B7	Q9H1B7	IRF2BPL	Interferon regulatory factor 2-binding protein-like	1	RNS(0.051)S(0.474)S(0.474)PVS(0.001)PASVPGQR	216.77	4.6124e-30	5374200.0	2104.8	1924.0	2662.3	2037.4	2241.8	2110.9	2084.9	2043.4	2116.8	2654.6	True	False	2012.275512216358	2241.9082975917318	2103.5196124821546	1858.784305267567	2536.6359941114815	2518.801549903179	2552.4918974971606	1971.5324637898534	2018.3904300307781	2173.8262164000635	0.925683707848901	1.0313190082436372	0.9676576704303718	0.8550749325057744	1.1668991637759547	1.1586949917617644	1.1741931706593278	0.9069411569866813	0.9284966823950201	1.0	11.086020895331286	-5.099142985418082	12.074466637253034	1.0168206961039103	0.9335175243212808	0.0	0.11165589331727811	0.0	0.0	0.027579261415297082	0.0	7.958972691696964e-06	5.099142985418082	-0.08330317178262958	
RNSSS(ph)PVSPASVPGQR	ddPTM_K562_Methotrexat_30min_R1	2	RNSSSPVSPASVPGQR	16	1	Q9H1B7	Q9H1B7	IRF2BPL	Interferon regulatory factor 2-binding protein-like	1	RNS(0.001)S(0.049)S(0.706)PVS(0.237)PAS(0.008)VPGQR;RNSS(0.236)S(0.764)PVSPASVPGQR	123.63	0.00022944	11573800.0	4068.7	3526.5	4790.8	4534.0	4283.0	3745.0	3517.7	4019.7	4489.5	4566.8	True	False	3889.844819723819	4109.194184749088	3785.2765501556955	4136.511259489127	4846.289572120383	4468.668247850399	4306.633770361055	3878.3248726123516	4280.784124916469	3739.7082668032135	1.040146594923819	1.0988007329945337	1.0121849834536518	1.1061053334582993	1.2959004356409598	1.1949242906239628	1.1515961842773534	1.0370661548762012	1.1446839751956854	1.0	11.86871001508188	-3.0409266037579115	20.635449602419285	1.115022338101621	0.00553251532477983	0.0	0.08783537087212517	0.0	0.0	0.021333361683879497	0.0	0.0009100670619647007	3.0409266037579115	-1.1094898227768413	
RNT(ph)LPAMDNSR	ddPTM_K562_Methotrexat_30min_R1	1	RNTLPAMDNSR	11	1	Q9UQC2;Q9UQC2-2	Q9UQC2	GAB2	GRB2-associated-binding protein 2	1	RNT(1)LPAMDNSR	69.258	0.024755000000000003	8174100.0	994.59	1070.8	1196.9	1128.3	615.76	785.85	943.69	1030.1	933.41	1188.1	True	False	950.8690144884398	1247.7314995120717	945.6870466062763	1029.3836907987604	696.7432329976292	937.7043905402492	1155.3365047479958	993.8707991337616	890.0159728340086	972.9235770756108	0.9773316598478763	1.2824558155559058	0.9720054780138011	1.0580313963537158	0.7161335683650328	0.9638006649595002	1.1874894719076263	1.021530182381964	0.9147850805601775	1.0	9.926182675866245	-6.830870879021098	24.999247808446814	0.9802963253541227	1.129902624811843	0.17430138483476376	0.13115840056651304	75.39986704886552	27146.811019159482	0.03526039068249295	0.07340040626371205	1.4761453438261324e-07	6.830870879021098	0.1496062994577202	
RNVS(ph)SFPDDATSPLQENR	ddPTM_K562_Methotrexat_30min_R1	1	RNVSSFPDDATSPLQENR	18	1	P52292;J3QLL0;J3KS65	P52292	KPNA2	Importin subunit alpha-1	1	RNVS(0.801)S(0.17)FPDDAT(0.013)S(0.016)PLQENR	88.385	0.006442100000000001	0.0	476.3	476.25	588.36	409.65	510.02	351.48	413.33	681.29	650.88	600.83	True	False	455.36242230551653	554.9422176341283	464.87127641513007	373.7366205226556	577.096569594405	419.3985355819649	506.02977408628783	657.3286445411516	620.6207308666066	492.0138648382621	0.9255072973506674	1.1278995518074524	0.9448336919691185	0.7596058713620044	1.1729274535466836	0.8524120264778152	1.0284868176481838	1.335996181240203	1.2613887030818143	1.0	8.942555160728599	-9.099392655186303	5.808629815365448	1.2214599053988322	0.9683437671847184	0.363583538073469	0.13811164799953488	0.22789996694987688	10.90676323716882	0.06395319158368486	0.03663794670037008	7.954398505569145e-10	9.099392655186303	-0.25311613821411383	
RNVSSFPDDATS(ph)PLQENR	ddPTM_K562_Methotrexat_30min_R1	1	RNVSSFPDDATSPLQENR	18	1	P52292;J3QLL0;J3KS65	P52292	KPNA2	Importin subunit alpha-1	1	RNVSSFPDDAT(0.24)S(0.76)PLQENR	78.378	0.0079832	10550000.0	715.42	748.48	1077.4	897.71	767.53	632.34	739.31	792.3	926.14	981.14	True	False	683.9709934197207	872.1535980153116	851.2684635421533	819.00915808469	868.473648211431	754.530755633036	905.1190871210255	764.4343599200847	883.0839535471969	803.4460385590146	0.8512967400354937	1.0855160846639114	1.0595216389004898	1.0193704602160811	1.0809358768748725	0.9391181478550714	1.126546206817277	0.9514445566140353	1.0991204277153614	1.0	9.650057321929546	-6.252703678517706	24.864376662770038	1.0394267840970612	0.8512966368412279	0.4772456695741658	0.05929888878738804	875.3571287769593	2491467.2890779055	0.013359819909243195	0.15561247075278112	5.588513720068719e-07	6.252703678517706	-0.18813014725583332	
RPAAAAAAGSAS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	RPAAAAAAGSASPR	14	1	Q96S55-2;Q96S55	Q96S55-2	WRNIP1	ATPase WRNIP1	1	RPAAAAAAGS(0.051)AS(0.949)PR;RPAAAAAAGS(0.002)AS(0.998)PR;RPAAAAAAGS(0.002)AS(0.998)PR;RPAAAAAAGSAS(1)PR	170.0	4.765e-05	57777000.0	3612.92	3217.09	3801.7000000000003	4273.58	4262.87	3355.07	3272.7599999999998	4103.9800000000005	3944.1200000000003	4287.81	True	False	3454.100362788257	3748.6594413198445	3003.77512330444	3898.9218765609926	4823.512124283172	4003.389793942708	4006.7597402526753	3959.640697241992	3760.7587220771893	3511.246059271589	0.9837249524759347	1.0676151366325797	0.8554726933399751	1.1104097550400178	1.3737322998331294	1.140162132292493	1.141121890239695	1.1277024254071852	1.0710610018761721	1.0	11.777767384854622	-7.504639756515371	24.58996348355784	1.1570212495186434	0.9794946260794718	0.3632157277905701	0.1017691942839463	634.3850934989355	855283.6005402475	0.028991551841162477	0.042069042202316484	3.128673498447837e-08	7.504639756515371	-0.17752662343917158	
RPAEATSS(ph)PT(ph)SPERPR	ddPTM_K562_Methotrexat_30min_R1	1	RPAEATSSPTSPERPR	16	2	Q9BU76	Q9BU76	MMTAG2	Multiple myeloma tumor-associated protein 2	2	RPAEAT(0.043)S(0.234)S(0.722)PT(0.719)S(0.282)PERPR	67.168	0.027844999999999998	0.0	1617.4	1271.1	1707.6	1657.9	1642.9	1251.1	1381.4	1488.8	1838.5	1957.6	True	False	1546.3010326200779	1481.1276699942052	1349.1980957347137	1512.554481055806	1858.9701466347358	1492.8573684607827	1691.214114443175	1436.438060140127	1753.028536286652	1603.0596704681554	0.9645935588713913	0.9239379527036936	0.8416393479231472	0.9435422204926918	1.1596387713327256	0.9312550218575523	1.0549913678193121	0.896060256896508	1.093551642887192	1.0	10.646612412391782	-7.535831860502023	24.998251212276312	1.017817224348751	0.9083026463892245	0.31651484167911714	0.07597586642089622	267.22222521161103	515710.1113753588	0.021501351739918063	0.027774103079735712	2.911844236383371e-08	7.535831860502023	-0.10951457795952657	
RPAEATSSPTS(ph)PERPR	ddPTM_K562_Methotrexat_30min_R1	3	RPAEATSSPTSPERPR	16	2	Q9BU76	Q9BU76	MMTAG2	Multiple myeloma tumor-associated protein 2	1	RPAEATSSPT(0.053)S(0.947)PERPR;RPAEATSSPT(0.058)S(0.942)PERPR;RPAEATSSPT(0.071)S(0.929)PERPR	135.36	4.5061999999999996e-05	230054000.0	2765.08	2662.31	2757.96	3002.31	2514.67	2474.8500000000004	2410.59	2939.12	2574.9300000000003	3257.2	True	False	2643.5303940133062	3102.2114759674873	2179.1018857534036	2739.1021436869864	2845.3931819574977	2953.0797365000158	2951.2261706497593	2835.749483690925	2455.2220663261305	2667.289517086676	0.9910924093836951	1.1630576493832778	0.8169723878094453	1.0269234464951325	1.0667732781649268	1.1071463062343123	1.1064513813533114	1.0631577357932438	0.9204932762633978	1.0	11.381158713298912	-7.518379058215106	24.945842903316677	1.052841740998069	0.9933600798765827	0.05739254845972008	0.09292302075865803	531.5664459582815	2946968.0560989287	0.027454123043630447	0.03639754585235181	3.0312443173936825e-08	7.518379058215106	-0.05948166112148634	
RPAS(ph)PALLLPPCMLK	ddPTM_K562_Methotrexat_30min_R1	3	RPASPALLLPPCMLK	15	1	Q9HAW0-2;Q9HAW0	Q9HAW0-2	BRF2	Transcription factor IIIB 50 kDa subunit	1	RPAS(1)PALLLPPCMLK;RPAS(1)PALLLPPCMLK;RPAS(1)PALLLPPCMLK	100.58	0.0020444000000000005	30370700.0	12466.4	9500.5	15004.2	13263.8	10264.0	9546.800000000001	8885.2	12340.400000000001	12481.5	15651.6	True	False	11918.391982845877	11070.29614411136	11855.023464524933	12100.983247377997	11613.895906664391	11391.583986269205	10877.932278594542	11906.381137394694	11901.237789318391	12816.943572895072	0.929893458222799	0.8637235610151648	0.9249493373440153	0.9441395429850242	0.9061361502148723	0.8887909915090694	0.8487150011020491	0.9289563513858319	0.9285550585154178	1.0	13.645764646346503	-10.155463768111835	1.7580381462800312	0.999471055925963	0.9022270465978952	0.5087410935455524	0.028507437758166772	0.513653141537706	3.134200368502608	0.028422426379165398	0.008067274561528226	6.99095057736454e-11	10.155463768111835	-0.09724400932806776	
RPAS(ph)PS(ph)SPEHLPAT(ph)PAESPAQR	ddPTM_K562_Methotrexat_30min_R1	1	RPASPSSPEHLPATPAESPAQR	22	1	Q9H7L9	Q9H7L9	SUDS3	Sin3 histone deacetylase corepressor complex component SDS3	3	RPAS(0.906)PS(0.547)S(0.547)PEHLPAT(0.829)PAES(0.17)PAQR	50.233999999999995	0.01891	9555100.0	349.55	286.8	547.13	228.24	299.1	300.23	356.56	271.08	223.0	542.1	True	False	334.1842005393522	334.18882523352835	432.2948899738428	208.2305535654606	338.4368926035973	358.2451984117825	436.52765646869733	261.5459627503932	212.6327786738774	443.92043694359796	0.7528020174971395	0.7528124353418505	0.9738116428029372	0.4690717890780893	0.7623818694488201	0.8070031667798595	0.9833466093027838	0.5891730611709227	0.4789884875268613	1.0	8.794157317898149														
RPAS(ph)PS(ph)SPEHLPATPAESPAQR	ddPTM_K562_Methotrexat_30min_R1	2	RPASPSSPEHLPATPAESPAQR	22	1	Q9H7L9	Q9H7L9	SUDS3	Sin3 histone deacetylase corepressor complex component SDS3	2	RPAS(0.981)PS(0.542)S(0.477)PEHLPATPAESPAQR;RPAS(0.666)PS(0.666)S(0.666)PEHLPAT(0.001)PAESPAQR	64.377	0.0037314999999999996	337122000.0	1838.76	1808.02	2148.9	1771.43	1936.16	1743.82	1874.1399999999999	2248.06	1957.9099999999999	2017.48	True	False	1757.9303120690581	2106.7645739146587	1697.8752564560345	1616.131482222501	2190.7989768752295	2080.7885351045343	2294.463602463106	2168.9944555874613	1866.887191450095	1652.094822219093	1.0640613894714632	1.2752080241283328	1.0277105367205555	0.9782316731988264	1.3260733871997428	1.2594849321721255	1.3888207696100539	1.31287528198537	1.1300121314722682	1.0	10.690080777484434	-7.772761189091416	24.999880448902037	1.2606490279189555	1.0956109458797576	0.23801897477225742	0.126522766551298	285.77466942355176	631021.8297378287	0.03890530574628108	0.044508218918874576	1.6874806863072586e-08	7.772761189091416	-0.1650380820391979	
RPAS(ph)PSHNGSSGGGYGASK	ddPTM_K562_Methotrexat_30min_R1	2	RPASPSHNGSSGGGYGASK	19	1	K7ELX9;K7EQ79;K7ENM4;K7ENP7;Q6PI98;Q6PI98-3;Q6PI98-4	K7ELX9	INO80C	INO80 complex subunit C	1	RPAS(0.815)PS(0.185)HNGSSGGGYGASK;RPAS(0.677)PS(0.321)HNGS(0.001)SGGGYGASK	89.859	0.0019765	6325700.0	2400.17	1655.42	3501.0	2667.0	1806.85	1550.48	1566.42	2561.4	2087.49	2785.2	True	False	2294.66140068241	1928.950017671157	2766.187943995803	2433.188250784626	2044.4824453387153	1850.0883164024247	1917.7295592486462	2471.31411018466	1990.4430455333277	2280.7732908601897	1.0060892110048265	0.8457438647677502	1.2128289800134147	1.0668260017491493	0.8963988019026837	0.8111671264374843	0.8408242796132437	1.0835422003966944	0.8727053466952147	1.0	11.155307334378032	-7.766815438203652	24.98361766742552	0.9124723305138212	1.032359791461058	0.2050049047799991	0.11110115200531497	220.53590184147362	1024873.2932756293	0.03568780296861634	0.04164314477276735	1.7107421734361317e-08	7.766815438203652	0.1198874609472369	
RPAS(ph)PSSPEHLPATPAESPAQR	ddPTM_K562_Methotrexat_30min_R1	2	RPASPSSPEHLPATPAESPAQR	22	1	Q9H7L9	Q9H7L9	SUDS3	Sin3 histone deacetylase corepressor complex component SDS3	1	RPAS(0.817)PS(0.091)S(0.091)PEHLPATPAESPAQR;RPAS(0.874)PS(0.025)S(0.1)PEHLPATPAESPAQR	81.904	0.0011773	141091000.0	1615.96	1513.74	2070.68	1778.99	1446.1999999999998	1508.15	1221.27	1920.75	1770.71	1808.59	True	False	1544.9243332958702	1763.8598058193918	1636.0725655164877	1623.0287087601585	1636.4006488910813	1799.5786429894745	1495.1708857289832	1853.1961338085357	1688.39007859023	1481.0368254045773	1.0431370150933557	1.1909628279077769	1.104680543692463	1.095873296949786	1.1049020664587885	1.2150802816789383	1.0095433550887871	1.2512829539551085	1.1400054675406261	1.0	10.532391797785847	-6.223943220565016	21.399206748103897	1.1286985773348013	1.0431356414459063	0.08592879086005767	0.07712025990134422	6263.453466465233	3574124.5630560564	0.01788624721925168	2.9704963239978426	5.971133477698224e-07	6.223943220565016	-0.08556293588889496	
RPAS(ph)VSSSAAVEHEQR	ddPTM_K562_Methotrexat_30min_R1	4	RPASVSSSAAVEHEQR	16	1	Q7Z5L9;Q7Z5L9-2	Q7Z5L9	IRF2BP2	Interferon regulatory factor 2-binding protein 2	1	RPAS(0.863)VS(0.103)S(0.034)S(0.001)AAVEHEQR;RPAS(0.452)VS(0.273)S(0.273)S(0.001)AAVEHEQR;RPAS(0.985)VS(0.015)S(0.001)SAAVEHEQR;RPAS(0.899)VS(0.085)S(0.015)SAAVEHEQR	139.78	1.5096000000000001e-06	71178000.0	2769.99	2183.88	2542.48	2350.94	1954.06	1880.32	2045.8	2363.58	2416.44	2358.0299999999997	True	False	2648.2245562923736	2544.729050387022	2008.8481930449707	2144.836740269821	2211.053140625158	2243.6652282504833	2504.6227271810108	2280.4515517101017	2304.1002318327546	1930.9679172221213	1.3714492781952035	1.31785154361749	1.0403322474331358	1.1107573156137	1.145049133600296	1.161938118308152	1.2970814816976068	1.1809888353767914	1.1932358954712303	1.0	10.915108478961496	-6.6160956008114855	6.738228597137762	1.1533672758713456	1.3581372072007583	0.5181234454076702	0.07846143080610028	0.16207973859367703	9.591314845966632	0.02062813470645097	0.05567100051733775	2.420496166678236e-07	6.6160956008114855	0.20476993132941268	
RPASPS(ph)S(ph)PEHLPATPAESPAQR	ddPTM_K562_Methotrexat_30min_R1	2	RPASPSSPEHLPATPAESPAQR	22	1	Q9H7L9	Q9H7L9	SUDS3	Sin3 histone deacetylase corepressor complex component SDS3	2	RPAS(0.609)PS(0.719)S(0.672)PEHLPATPAESPAQR;RPAS(0.431)PS(0.785)S(0.785)PEHLPATPAESPAQR	75.297	0.0011935000000000001	31488000.0	1630.31	1789.1000000000001	2166.96	1928.49	1549.61	1503.4699999999998	1944.0300000000002	1996.5	2092.0	2057.66	True	False	1558.643524478074	2084.7183654996716	1712.1447092605383	1759.4222758738824	1753.4108764542304	1793.9942992244696	2380.0282140589034	1926.2819633730264	1994.7433766177205	1684.9978348669313	0.9250121823457204	1.2372231716631892	1.0161109253862934	1.0441688644738398	1.0406012637949187	1.064686412114082	1.412481467222099	1.1431955124886852	1.1838254835355624	1.0	10.718531022283614	-8.580135222113135	24.99999972643992	1.2027767786622483	1.059604156302055	0.21780868607807602	0.11880997076475715	113.13197702377464	49395.801835320446	0.04306557577546977	0.033358444968732706	2.6294491580264325e-09	8.580135222113135	-0.14317262236019324	
RPASPSS(ph)PEHLPATPAESPAQR	ddPTM_K562_Methotrexat_30min_R1	2	RPASPSSPEHLPATPAESPAQR	22	1	Q9H7L9	Q9H7L9	SUDS3	Sin3 histone deacetylase corepressor complex component SDS3	1	RPAS(0.226)PS(0.226)S(0.545)PEHLPAT(0.003)PAESPAQR;RPAS(0.205)PS(0.205)S(0.59)PEHLPATPAESPAQR	94.295	0.00014344	297160000.0	2151.08	1823.1999999999998	2204.3	2326.0	2090.77	1918.74	1776.12	2375.3999999999996	2121.4	2457.6000000000004	True	False	2056.5210988304652	2124.4528108987765	1741.64755354183	2122.083191347972	2365.7429018683492	2289.5093495007927	2174.4601222997067	2291.8558356104622	2022.7765770348128	2012.5048253690952	1.021871387788249	1.0556261948386385	0.8654128584374501	1.0544487469533297	1.1755216047417276	1.1376416695452616	1.0804744887510562	1.138807622580549	1.0051039637451968	1.0	10.97477652703355	-7.5152095976483375	24.970940256003516	1.0999791955205993	0.9836849219604886	0.3204075283559298	0.06973692059583537	374.24924774737883	1218568.233971821	0.019918611489577322	0.026881139159944556	3.053447113839434e-08	7.5152095976483375	-0.11629427356011068	
RPCTLNPAQRYS(ph)PSNGPPQPTPPPHYR	ddPTM_K562_Methotrexat_30min_R1	2	RPCTLNPAQRYSPSNGPPQPTPPPHYR	27	2	O75081;O75081-2;O75081-4;H3BNH2	O75081	CBFA2T3	Protein CBFA2T3	1	RPCT(0.024)LNPAQRY(0.382)S(0.435)PS(0.16)NGPPQPTPPPHYR;RPCT(0.007)LNPAQRY(0.393)S(0.444)PS(0.155)NGPPQPT(0.001)PPPHYR	60.472	0.0016395	86770000.0	1594.04	1557.82	1534.44	1899.36	1558.84	1424.6399999999999	1257.1	1834.0700000000002	1647.9099999999999	1915.23	True	False	1523.9679102496025	1815.2232765875008	1212.3820133633017	1732.8460577466403	1763.854783237015	1699.931517387875	1539.0366753051367	1769.5647185392272	1571.2990237868578	1568.3632880418502	0.9716931796792587	1.1573997494253152	0.7730237137066616	1.104875427114946	1.1246468191940668	1.083888873419303	0.981301135419123	1.1282875160566805	1.0018718467636876	1.0	10.615044061685433														
RPDDVPLSLS(ph)PSKR	ddPTM_K562_Methotrexat_30min_R1	1	RPDDVPLSLSPSKR	14	2	F8WDB4;Q9UFC0	F8WDB4	LRWD1	Leucine-rich repeat and WD repeat-containing protein 1	1	RPDDVPLS(0.016)LS(0.933)PS(0.051)KR	99.81299999999999	0.014085	108310000.0	2377.7	1710.1	2924.8	2071.3	1813.4	1580.1	1738.7	2274.9	2470.3	3162.3	True	False	2273.1791549775926	1992.6649582700736	2310.924449756903	1889.7123449007122	2051.8938851466514	1885.4319621971724	2128.647734749058	2194.890477574406	2355.4562921886954	2589.5768266864793	0.8778187739215535	0.7694944354363139	0.8923946283199757	0.7297378959475451	0.7923664839757522	0.7280849684655608	0.822006017667679	0.8475865457843555	0.909591199579371	1.0	11.33850064515264	-9.887446538937555	1.459745367610007	0.9981424055392786	0.797844837515836	0.6071270243546285	0.051239099638506314	0.2522760662199064	1.178204470864489	0.04769696041444116	0.014390483854567412	1.2958462046117533e-10	9.887446538937555	-0.20029756802344256	
RPDHSGGS(ph)PS(ph)PPT(ph)SEPAR	ddPTM_K562_Methotrexat_30min_R1	1	RPDHSGGSPSPPTSEPAR	18	1	Q8TAD8	Q8TAD8	SNIP1	Smad nuclear-interacting protein 1	3	RPDHS(0.22)GGS(0.975)PS(0.794)PPT(0.537)S(0.474)EPAR	61.038999999999994	0.019341999999999998	11133000.0	2670.9	2279.2	2992.6	2870.3	2025.7	2565.6	2410.6	2799.9	2676.5	2901.4	True	False	2553.49043404536	2655.7990602240525	2364.4941562987265	2618.665255428238	2292.1150563260003	3061.3658896355078	2951.238413404315	2701.4259300015733	2552.0700991956637	2375.9283448591664	1.074733772830476	1.1177942575458755	0.9951874859419981	1.1021650804807668	0.9647239830634984	1.2884925154664	1.2421411696989753	1.1369980647129747	1.0741359707743787	1.0	11.214275611509867	-8.24941332875458	24.972653900695406	1.1627776557048766	1.0543867047185895	0.2309079623336039	0.0868231276462917	1037.2225293198621	2153843.2384283356	0.028797445476073727	0.028586178672698716	5.6310148317201645e-09	8.24941332875458	-0.10839095098628704	
RPDHSGGS(ph)PSPPTSEPAR	ddPTM_K562_Methotrexat_30min_R1	1	RPDHSGGSPSPPTSEPAR	18	1	Q8TAD8	Q8TAD8	SNIP1	Smad nuclear-interacting protein 1	1	RPDHS(0.02)GGS(0.97)PS(0.01)PPTSEPAR	77.575	0.008876799999999999	1401400.0	178.14	172.06	213.02	143.7	223.88	175.85	202.16	271.05	60.132	307.5	True	False	170.30917889881326	200.48999048005894	168.31001309054153	131.102044108643	253.3241441527695	209.83052373417686	247.49952611541372	261.51701786739756	57.33647644492195	251.80877026407728	0.6763433168757639	0.7961993947621473	0.6684040945596581	0.5206412944678356	1.006017955161383	0.8332931514423547	0.9828868385158135	1.038554048745558	0.22769848875713086	1.0	7.976184721426357	-7.762264659051193	24.99977804763593	0.8560042581264647	0.6749548616171266	0.1309696330984378	0.22945681650214136	48.41076366628613	1466502.8281921772	0.06860214062517296	0.08244246679260075	1.7287625302842884e-08	7.762264659051193	-0.18104939650933816	
RPDPDS(ph)DEDEDYER	ddPTM_K562_Methotrexat_30min_R1	3	RPDPDSDEDEDYER	14	1	H0Y6J6;Q5W012;Q96I25;Q5W011;Q5W010	H0Y6J6	RBM17	Splicing factor 45	1	RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER	156.0	2.2382e-09	201814000.0	4486.179999999999	4690.7	6103.0	4714.61	4584.610000000001	4840.8	4518.45	5569.870000000001	5573.4	5744.6	True	False	4288.972898800259	5465.758446732608	4822.063702429698	4301.287461204239	5187.566573719084	5776.216089237436	5531.827432608777	5373.974515067632	5314.293850497704	4704.197273687866	0.9117332138237283	1.1618897186358246	1.0250555879960856	0.9143509957081869	1.1027527699007995	1.2278855994296256	1.1759344072473576	1.1423786466452102	1.1296919625846285	1.0	12.199732846495278	-7.988484780474131	24.31633692536284	1.1487012990079444	1.015196057715387	0.3442553242325681	0.08486208213214988	177.05306950214975	373873.9363367977	0.025846445398828008	0.029282075211504218	1.0268694169095873e-08	7.988484780474131	-0.13350524129255747	
RPDPDS(ph)DEDEDYERER	ddPTM_K562_Methotrexat_30min_R1	7	RPDPDSDEDEDYERER	16	2	H0Y6J6;Q5W012;Q96I25;Q5W011;Q5W010	H0Y6J6	RBM17	Splicing factor 45	1	RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(0.963)DEDEDY(0.037)ERER	159.18	8.9465e-10	2938565300.0	15690.0	13546.7	18335.5	18048.0	14116.599999999999	14832.999999999998	13829.1	16351.7	15858.0	17718.6	True	False	15000.286386675534	15785.061920470853	14487.129119433022	16465.759861327693	15973.1803347641	17699.267321859796	16930.627703812173	15776.60144276822	15120.765041302013	14509.589843255542	1.0338187742535039	1.0879054536340451	0.9984520083568758	1.1348191119945015	1.1008705626636905	1.2198323669422608	1.1668577738385897	1.087322358054223	1.042122155391633	1.0	13.824719117461022	-7.276487827565194	24.7038684740256	1.117931504084321	1.0448434135204256	0.18564677833063603	0.06170388726670251	1016.7149680072393	1669059.3286297205	0.017770711298211946	0.026468474027383036	5.2906882577823265e-08	7.276487827565194	-0.07308809056389531	
RPDPDSDEDEDY(ph)ERER	ddPTM_K562_Methotrexat_30min_R1	1	RPDPDSDEDEDYERER	16	2	H0Y6J6;Q5W012;Q96I25;Q5W011;Q5W010	H0Y6J6	RBM17	Splicing factor 45	1	RPDPDS(0.012)DEDEDY(0.988)ERER	86.49799999999999	0.010258	9411000.0	2457.8	2706.3	3200.2	3335.2	2591.7	2707.3	2440.2	2854.2	2659.2	2957.6	True	False	2349.7580548866235	3153.470075765333	2528.5217533205837	3042.808194232055	2932.553977133877	3230.4474091870197	2987.476966891732	2753.8161682240384	2535.5743724196163	2421.9499802700325	0.9701926439556939	1.3020376562086309	1.0440024665739254	1.256346422931823	1.2108235104041725	1.3338208614972489	1.233500687969884	1.1370243773230218	1.046914425597227	1.0	11.241953354499636	-9.715722272259855	2.504287307460151	1.0062048203009404	1.1994557470194498	0.29036370102113007	0.10509009236881536	0.3399021003893356	3.9626076152890017	0.09324449895021121	0.02717349124026329	1.924321923521422e-10	9.715722272259855	0.1932509267185094	
RPDPIDWSLKYKTPDFESTGLYSAMPR	ddPTM_K562_Methotrexat_30min_R1	1	RPDPIDWSLKYKTPDFESTGLYSAMPR	27	3	H0YMX4;P50440-3;P50440-2;P50440	H0YMX4	GATM	Glycine amidinotransferase, mitochondrial	0		50.028999999999996	0.018783	0.0	10205.0	7093.2	14098.0	10205.0	6795.9	6439.3	5793.3	8803.8	8758.7	12121.0	False	True	9756.400419121985	8265.23073621501	11139.022460569218	9310.34349428464	7689.679968053451	7683.603591023511	7092.594997251808	8494.16536395866	8351.509948748391	9925.769445108563	0.9829364336011206	0.8327042837256441	1.1222326412244594	0.9379971543538919	0.774718777277558	0.7741065953138782	0.7145637460627349	0.8557689568484387	0.8413967294861993	1.0	13.276963228893983	-7.6589205125777715	5.459600282084204	0.8117427124232025	0.974304414230973	0.34124821243713144	0.09633686367980927	0.21863937825912266	9.838428653154521	0.02823628006988618	0.036524212716130794	2.1932063136105914e-08	7.6589205125777715	0.16256170180777052	
RPDYAPMES(ph)S(ph)DEEDEEFQFIKK	ddPTM_K562_Methotrexat_30min_R1	2	RPDYAPMESSDEEDEEFQFIKK	22	2	P55081	P55081	MFAP1	Microfibrillar-associated protein 1	2	RPDY(0.125)APMES(0.95)S(0.925)DEEDEEFQFIKK;RPDY(0.068)APMES(0.966)S(0.966)DEEDEEFQFIKK	88.574	0.013543000000000001	106081000.0	5796.0	3521.8	8622.5	6079.4	3903.7	3341.6000000000004	3345.0	4318.6	4851.0	7705.7	True	False	5541.214779934445	4103.717589635428	6812.755083434388	5546.428440877413	4417.104973776871	3987.3169070806093	4095.2013991692634	4166.712390194218	4625.478068820535	6310.1230602403275	0.8781468644960788	0.6503387573362371	1.0796548685969554	0.8789731020976589	0.7000029843488728	0.6318920992530925	0.6489891496685476	0.6603218907802924	0.7330250178424205	1.0	12.623452425633344	-7.762471196997968	24.976054435779794	0.703194809026592	0.8708096217493296	0.1901343480539861	0.13827436073080915	38.513133453928624	932253.8611782897	0.041071513648913364	0.049279061217646795	1.7279405760821377e-08	7.762471196997968	0.1676148127227376	
RPEGPGAQAPS(ph)SPRVTEAPCYPGAPSTEASGQTGPQEPTSARA	ddPTM_K562_Methotrexat_30min_R1	2	RPEGPGAQAPSSPRVTEAPCYPGAPSTEASGQTGPQEPTSARA	43	3	P40222	P40222	TXLNA	Alpha-taxilin	1	RPEGPGAQAPS(0.417)S(0.417)PRVT(0.133)EAPCY(0.032)PGAPSTEASGQTGPQEPTSARA;RPEGPGAQAPS(0.262)S(0.262)PRVT(0.227)EAPCY(0.168)PGAPS(0.037)T(0.034)EAS(0.008)GQT(0.002)GPQEPTSARA	75.78	1.6141e-09	148336000.0	899.24	880.9300000000001	773.81	1078.52	828.01	652.79	769.9300000000001	568.2	640.8	1100.4	True	False	859.7104863195733	1026.4887092502515	611.3978557393287	983.9678261103243	936.9078283005833	778.932428708748	942.606401573212	548.2160839411742	611.00934786646	901.1068969059862	0.9540604885740522	1.1391419961103089	0.6784964778747186	1.0919546054844846	1.0397299493739556	0.8644173420304153	1.0460539196955625	0.6083807435316638	0.6780653327195735	1.0	9.815554450628603	-9.254137821484148	24.923087312242046	0.7324172753845549	0.9713578759644592	0.27469215814392034	0.1550459078033843	595.937243182165	2034176.8240441377	0.07160822882386722	0.04024260293664621	5.570089564868943e-10	9.254137821484148	0.2389406005799043	
RPEGPGAQAPSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	6	RPEGPGAQAPSSPR	14	1	P40222	P40222	TXLNA	Alpha-taxilin	1	RPEGPGAQAPS(0.167)S(0.833)PR;RPEGPGAQAPS(0.084)S(0.916)PR;RPEGPGAQAPS(0.056)S(0.944)PR;RPEGPGAQAPS(0.021)S(0.979)PR;RPEGPGAQAPS(0.091)S(0.909)PR;RPEGPGAQAPS(0.024)S(0.976)PR	152.94	7.6663e-09	303833100.0	12352.9	12061.3	14760.400000000001	11315.699999999999	12818.6	11407.800000000001	11135.599999999999	14084.800000000001	13613.199999999999	13219.800000000001	True	False	11809.881306944817	14054.224817953818	11662.393752800806	10323.670149757638	14504.470583512108	13612.195897951347	13633.041764002768	13589.429600659367	12980.325303332858	10825.566117518858	1.0909250545182165	1.298243866915197	1.0773010506977296	0.9536379010286576	1.339834834137656	1.2574119219430868	1.259337536347463	1.2553089097731147	1.1990435569301992	1.0	13.402154851483553	-6.759076426166209	24.99905748310058	1.1818270914697018	1.1945843649482835	0.0	0.1264638321998059	1214.8127901541357	12851697.701103497	0.033734647748053286	0.08149055394735107	1.741500381104012e-07	6.759076426166209	0.012757273478581688	
RPEGPGAQAPSSPRVT(ph)EAPCYPGAPSTEASGQTGPQEPTSAR	ddPTM_K562_Methotrexat_30min_R1	2	RPEGPGAQAPSSPRVTEAPCYPGAPSTEASGQTGPQEPTSAR	42	2	P40222	P40222	TXLNA	Alpha-taxilin	1	RPEGPGAQAPS(0.109)S(0.109)PRVT(0.707)EAPCY(0.073)PGAPS(0.001)TEASGQTGPQEPTSAR;RPEGPGAQAPS(0.018)S(0.018)PRVT(0.909)EAPCY(0.055)PGAPSTEASGQTGPQEPTSAR	99.641	8.044900000000001e-18	130996000.0	677.9200000000001	620.66	718.8	866.0799999999999	574.77	501.13	673.3299999999999	572.64	523.96	1049.25	True	False	648.1194485184886	723.2135155838274	567.9337029832	790.1521110759462	650.362329527815	597.9662801188969	824.3413925568437	552.4999266245585	499.6012139639677	859.2206575596205	0.7543108313518594	0.8417087150091528	0.6609870211876181	0.9196148906849558	0.7569211980715058	0.695940297591605	0.9594059282724398	0.6430244917455573	0.5814585689582317	1.0	9.746884869085665														
RPES(ph)PSEIS(ph)PIKGSVR	ddPTM_K562_Methotrexat_30min_R1	2	RPESPSEISPIKGSVR	16	2	Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3	Q7Z5K2	WAPAL	Wings apart-like protein homolog	2	RPES(0.958)PS(0.215)EIS(0.826)PIKGS(0.001)VR;RPES(0.911)PS(0.095)EIS(0.994)PIKGSVR	127.2	0.00070969	87684000.0	10290.6	7959.0	15205.099999999999	10890.5	7699.5	7452.9	7150.1	9494.4	9493.099999999999	13309.7	True	False	9838.23754561652	9274.089470131286	12013.75729998588	9935.74677359205	8712.119206290192	8893.067445768822	8753.691935485851	9160.47657052285	9051.767853044776	10899.184356370051	0.9026581461452701	0.8508975687443093	1.1022620507345042	0.9116046163385687	0.7993368055287895	0.8159388037666553	0.803151102804288	0.8404735869220332	0.8304995637361112	1.0	13.411932554088418	-7.571114936629288	6.900807828123358	0.8374916110027918	0.9523560206509591	0.24930670943917166	0.0805195677127446	0.24970071022248747	27.772939719486704	0.0234301071789122	0.030466424019372784	2.6846338596070253e-08	7.571114936629288	0.11486440964816735	
RPGAPSLS(ph)PAPR	ddPTM_K562_Methotrexat_30min_R1	4	RPGAPSLSPAPR	12	1	Q5QP82;Q5QP82-2	Q5QP82	DCAF10	DDB1- and CUL4-associated factor 10	1	RPGAPS(0.091)LS(0.909)PAPR;RPGAPS(0.004)LS(0.996)PAPR;RPGAPS(0.008)LS(0.992)PAPR;RPGAPS(0.036)LS(0.964)PAPR	85.473	0.017334	153476600.0	7648.700000000001	7109.599999999999	8635.9	8295.0	7480.800000000001	6825.4	7012.700000000001	8108.0	7355.6	8482.5	True	False	7312.472306294788	8284.340557462672	6823.342606556224	7567.790228818328	8464.656322932098	8144.3119516363395	8585.476487878714	7822.837044341847	7013.639761495844	6946.237052894428	1.052724266478604	1.1926371781410294	0.9823077667228481	1.0894805592136976	1.2185959474856907	1.1724782626361254	1.2359895613267662	1.1261978226156488	1.0097034852234605	1.0	12.762015930798094	-6.0518986884032815	18.82716553090661	1.1221353002605625	1.0454491589217338	0.03494417130925942	0.08829773454022184	18263192.16208847	1450210804.6169446	0.022484085832912663	7057133.554321684	8.87362990666803e-07	6.0518986884032815	-0.07668614133882867	
RPGPAAS(ph)PTPGPGPAPPAAPAPPR	ddPTM_K562_Methotrexat_30min_R1	2	RPGPAASPTPGPGPAPPAAPAPPR	24	1	Q9NUE0	Q9NUE0	ZDHHC18	Palmitoyltransferase ZDHHC18	1	RPGPAAS(0.997)PT(0.003)PGPGPAPPAAPAPPR;RPGPAAS(0.996)PT(0.004)PGPGPAPPAAPAPPR	99.75299999999999	1.6947999999999999e-06	30291000.0	876.0999999999999	963.09	1125.83	992.05	913.4	880.56	1014.72	553.12	914.3	1063.29	True	False	837.5876930125194	1122.2242527690335	889.5336683772615	905.0785167569883	1033.5281100104505	1050.7157576307463	1242.29679036324	533.6664560885996	871.7943925628977	870.7178775092381	0.9619507243936574	1.2888494445287497	1.0216095148084563	1.0394624253564677	1.1869839091474093	1.2067235378655683	1.4267500673317226	0.6129039840266028	1.0012363534520952	1.0	9.766061534717984	-9.264314630149565	24.999996106144263	0.8553026451689416	1.1592545241762975	0.3998144707140734	0.16266136399007478	246.94558160607747	2147137.5744580175	0.08198123128815477	0.04214122104665718	5.441083238402077e-10	9.264314630149565	0.3039518790073559	
RPGQSFHVNSEVNS(ph)VLSPR	ddPTM_K562_Methotrexat_30min_R1	1	RPGQSFHVNSEVNSVLSPR	19	1	Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2	Q5T1Z4	PUM1	Pumilio homolog 1	1	RPGQSFHVNSEVNS(0.586)VLS(0.414)PR	111.6	0.00072281	124260000.0	6788.8	4966.9	6663.3	6404.0	5100.3	5124.1	5761.3	6194.4	6273.2	6548.8	True	False	6490.372480679597	5787.595802135327	5264.76438938224	5842.571262851425	5771.078847696845	6114.259804755736	7053.418182670819	5976.539440980658	5981.560301242005	5362.748860830535	1.2102697047936022	1.0792218603425325	0.9817286854202752	1.089473218767619	1.0761419185315106	1.14013539761562	1.315261699869803	1.1144544702872894	1.1153907177961033	1.0	12.388756977755477	-8.318142085291907	5.4718664662793035	1.156177554339423	1.081141933479396	0.05072709629407335	0.08938336959547225	0.46054279872226295	30.05763443187556	0.032151322945517924	0.028507462254930758	4.806820611082749e-09	8.318142085291907	-0.07503562086002713	
RPGQSFHVNSEVNSVLS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	3	RPGQSFHVNSEVNSVLSPR	19	1	Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2	Q5T1Z4	PUM1	Pumilio homolog 1	1	RPGQSFHVNSEVNS(0.004)VLS(0.996)PR;RPGQSFHVNSEVNS(0.003)VLS(0.997)PR;RPGQSFHVNSEVNS(0.043)VLS(0.957)PR	143.23	7.361799999999999e-10	154401100.0	8972.3	7339.3	8802.2	9069.699999999999	8221.900000000001	7983.9	7103.9	8265.4	9080.8	10616.8	True	False	8577.888435128669	8551.994578230246	6954.738509180189	8274.573482617672	9303.223962880364	9526.675680644274	8697.130409434543	7974.70119712668	8658.635590052669	8693.994641104571	0.9866452406783228	0.9836668794108798	0.7999474115498868	0.9517573709438575	1.0700747293879618	1.0957765761210443	1.0003606821098263	0.9172654833973414	0.9959329338800454	1.0	13.085803491014888	-7.535144473053224	23.49163121271269	1.0124303176867715	0.9205125325043235	0.28429406345290664	0.06541875134934355	149.2489421735542	285842.5487341823	0.02104257802897804	0.027191626994065462	2.9164566597670574e-08	7.535144473053224	-0.09191778518244798	
RPILQLS(ph)PPGPR	ddPTM_K562_Methotrexat_30min_R1	2	RPILQLSPPGPR	12	1	Q8N3X1-2;Q8N3X1;F5GXL1	Q8N3X1-2	FNBP4	Formin-binding protein 4	1	RPILQLS(1)PPGPR;RPILQLS(1)PPGPR	88.10799999999999	0.013981	792950000.0	2394.08	2287.3999999999996	2393.7	2564.2	2576.64	1758.0900000000001	2135.73	2290.91	2588.5	2653.3999999999996	True	False	2288.83910979045	2665.353970847882	1891.2950818459735	2339.40056717733	2915.5133231632667	2097.8160106444084	2614.721818908153	2210.3373967998505	2468.161199988033	2172.8435480283015	1.053384221734421	1.2266663070456676	0.8704239583021001	1.0766539400870194	1.3417962493474895	0.9654703453214681	1.203364053192336	1.0172556596656819	1.1359129847281046	1.0	11.08536858407335	-3.001973723930759	24.715004468550376	1.0937336017221422	3.939096412985954e-05	0.0	0.13261878763535065	0.0	0.0	0.029010877985429458	0.0	0.0009954656440732837	3.001973723930759	-1.0936942107580123	
RPIS(ph)DDDCPSASK	ddPTM_K562_Methotrexat_30min_R1	2	RPISDDDCPSASK	13	1	Q96PU4	Q96PU4	UHRF2	E3 ubiquitin-protein ligase UHRF2	1	RPIS(0.791)DDDCPS(0.209)ASK;RPIS(0.99)DDDCPS(0.01)ASK	140.93	7.18e-06	21077000.0	5402.0	4618.6	7957.9	5614.2	4255.7	4094.6	3785.9	5432.5	5535.2	6912.8	True	False	5164.534548172162	5381.745147223065	6287.645541138011	5122.011802607819	4815.399143607917	4885.823500039582	4634.984447567988	5241.435895829691	5277.869760159851	5660.824933598419	0.9123289641973118	0.950699802652623	1.1107295517689046	0.9048172064476665	0.8506532528549526	0.8630939054555442	0.8187825099586088	0.9259137947758198	0.9323499352248763	1.0	12.466796592293552	-7.494439062486056	24.87138755879306	0.887983661365337	0.9906268095869146	0.27580535669107364	0.06701191480504771	788.1223730947878	689237.7057530832	0.01900606977125828	0.028119909096218077	3.203029492375433e-08	7.494439062486056	0.10264314822157761	
RPISDDDCPS(ph)ASK	ddPTM_K562_Methotrexat_30min_R1	1	RPISDDDCPSASK	13	1	Q96PU4	Q96PU4	UHRF2	E3 ubiquitin-protein ligase UHRF2	1	RPIS(0.162)DDDCPS(0.654)AS(0.184)K	103.13	0.0033063000000000003	10821000.0	3325.2	2534.4	4354.9	4032.9	2522.9	2750.1	2521.7	3107.4	3240.7	3880.4	True	False	3179.0281894820578	2953.16652256574	3440.8660032297407	3679.3419184811846	2854.705571212355	3281.5179034481644	3087.255416527694	2998.1109807089115	3090.0405643427534	3177.6219581552064	1.0004425420472824	0.9293637070283288	1.0828430973039231	1.1578916456812427	0.8983779722083987	1.0326961314659582	0.9715615819573529	0.9435077615241205	0.9724380700518261	1.0	11.633731782055717	-7.793250186553347	24.99989373504728	0.9701755608956475	1.0374168255676524	0.23872100501317606	0.06347581821751382	334.57016523359744	262934.3212846128	0.020847004046044632	0.023640180459918492	1.609718048365866e-08	7.793250186553347	0.06724126467200486	
RPLDS(ph)PEAEELPAMK	ddPTM_K562_Methotrexat_30min_R1	3	RPLDSPEAEELPAMK	15	1	Q5VWG9	Q5VWG9	TAF3	Transcription initiation factor TFIID subunit 3	1	RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK	109.48	0.0034732	76130000.0	10774.7	7360.099999999999	14182.1	10676.1	7650.5	7624.299999999999	7301.700000000001	10204.0	9924.2	12645.3	True	False	10301.057089261503	8576.231424690699	11205.471019863711	9740.142888714565	8656.67484742166	9097.588069982852	8939.292094563298	9845.119536317747	9462.82610814033	10355.113634537678	0.9947797245704887	0.8282121980859942	1.0821195609568024	0.9406118785821929	0.8359806712838794	0.8785599454591625	0.8632732010538103	0.9507495411234373	0.9138312182860767	1.0	13.338055764984693	-5.916573534860581	19.282143031555098	0.9192441211064825	4.062621304232334	0.08074384760721365	0.07384846113614045	749.211852251082	174668.22999969285	0.017906837070723807	886.4685173178243	1.211787491213572e-06	5.916573534860581	3.143377183125851	
RPLEEDFRRS(ph)PTEDFR	ddPTM_K562_Methotrexat_30min_R1	2	RPLEEDFRRSPTEDFR	16	3	Q8IXT5	Q8IXT5	RBM12B	RNA-binding protein 12B	1	RPLEEDFRRS(0.902)PT(0.098)EDFR;RPLEEDFRRS(0.919)PT(0.081)EDFR	65.704	0.028673	1099710000.0	3893.0	2931.2	3779.2	3488.2	3683.0	2931.2	3127.8999999999996	5321.8	4786.200000000001	5253.9	True	False	3721.8683813465796	3415.5309781189635	2985.9975658237468	3182.394921779878	4167.379055362918	3497.612915380264	3829.411197746349	5134.629277575043	4563.690606676737	4302.367798668085	0.8650744323855308	0.7938723832900418	0.6940358671213892	0.7396845343545652	0.9686245459193524	0.8129507004173482	0.8900706255127345	1.1934426617744318	1.06073929990122	1.0	12.070915147087659	-9.087092901517053	4.4719361264487665	1.0933909280798992	0.8122105202383498	0.686993014264403	0.08201577573310263	0.1308432094607743	4.581501909986084	0.04208888913436172	0.02389488022831457	8.182897260707186e-10	9.087092901517053	-0.2811804078415494	
RPLEEDWR	ddPTM_K562_Methotrexat_30min_R1	2	RPLEEDWR	8	1	Q8IXT5	Q8IXT5	RBM12B	RNA-binding protein 12B	0	;	104.06	0.017706	19775700.0	3737.6	3174.4	3852.6000000000004	3877.1	3213.3	3425.2	3504.2000000000003	3967.2	3908.5	4199.9	False	True	3573.2995792758734	3698.915644425777	3043.991908894096	3537.2006625860795	3635.905272494612	4087.0714239084605	4290.1060517096985	3827.671327369636	3726.794688102463	3439.257412136904	1.0389741595572184	1.0754983419887552	0.8850724281794253	1.0284780226404515	1.0571774184926523	1.1883586873973042	1.2473931252049375	1.112935401072931	1.0836044650077252	1.0	11.74788138346238	-8.002797379410051	3.3555374109645055	1.140599964356256	1.0042127354053332	0.34194431835106054	0.07672423750319517	0.25646765210736	6.067649365922961	0.026400808732189196	0.028557948331845755	9.935794959579425e-09	8.002797379410051	-0.13638722895092292	
RPLPVES(ph)PDTQR	ddPTM_K562_Methotrexat_30min_R1	3	RPLPVESPDTQR	12	1	P57682	P57682	KLF3	Krueppel-like factor 3	1	RPLPVES(0.675)PDT(0.325)QR;RPLPVES(0.88)PDT(0.12)QR;RPLPVES(0.681)PDT(0.319)QR	126.56	0.000367	73950000.0	3537.05	3737.2000000000003	3573.96	3637.21	2978.46	3500.4100000000003	3137.14	3701.05	3506.9400000000005	3633.6899999999996	True	False	3381.565517144085	4354.708778461444	2823.8346370531945	3318.3414464328284	3370.1796962357425	4176.814691978107	3840.723502956614	3570.8819737248887	3343.9031248545616	2975.5935298239847	1.1364339528403649	1.4634756847045027	0.9489987825118819	1.1151864033758396	1.1326075495382257	1.4036912804502495	1.290741986249649	1.2000570433879514	1.1237768503456733	1.0	11.53896175043674	-10.029201642773852	2.5256233679959186	1.0009841853289416	1.2145640479521522	0.18059296679963743	0.1403244626104691	0.535958279730997	8.0709563087144	0.1382347415913548	0.03757499245753821	9.349714664339876e-11	10.029201642773852	0.2135798626232106	
RPLPVESPDT(ph)QR	ddPTM_K562_Methotrexat_30min_R1	1	RPLPVESPDTQR	12	1	P57682	P57682	KLF3	Krueppel-like factor 3	1	RPLPVES(0.057)PDT(0.943)QR	84.62	0.025156	14705000.0	1847.3	1473.3	2025.1	1614.6	1542.5	1646.2	1601.4	1819.4	1829.5	2119.1	True	False	1766.0949038945635	1716.7377831818594	1600.059184628933	1473.0505248282186	1745.3657868306552	1964.3048516986178	1960.5547146874915	1755.4106707542637	1744.4469443222365	1735.3104555011587	1.017740023576654	0.9892972048543697	0.9220593234810166	0.848868581502784	1.005794543159479	1.131961629961669	1.1298005544035532	1.0115830658366547	1.0052650456822374	1.0	10.760978075733325	-7.99826335419114	24.992272796249008	1.0619428209624928	0.9437446803769071	0.4304853299596345	0.06009556219896959	55.908937825315334	804566.0310271513	0.020236557574170807	0.02278465368143816	1.004006780518577e-08	7.99826335419114	-0.11819814058558575	
RPLS(ph)ASLGQLNEVGLPSAAILPDEGAVDLPSR	ddPTM_K562_Methotrexat_30min_R1	2	RPLSASLGQLNEVGLPSAAILPDEGAVDLPSR	32	1	Q5TC82-2;Q5TC82	Q5TC82-2	RC3H1	Roquin-1	1	RPLS(0.498)AS(0.498)LGQLNEVGLPS(0.004)AAILPDEGAVDLPSR;RPLS(0.5)AS(0.5)LGQLNEVGLPSAAILPDEGAVDLPSR	62.495	0.00034004	37313000.0	2129.35	1330.52	1548.95	1531.63	1503.1	1500.42	1587.88	2078.12	2419.6000000000004	2885.8999999999996	True	False	2035.7463236116985	1550.3658150268968	1223.8465626541843	1397.3543759089841	1700.7839962302467	1790.3549298904386	1944.0025105270233	2005.03134171037	2307.1133241224825	2363.235545057238	0.861423368427878	0.6560352472141522	0.517869056774255	0.5912886588184505	0.7196845019479653	0.7575863242388206	0.8226020950780593	0.8484263643985634	0.9762519563265132	1.0	11.206547715391709	-9.09049121065451	0.8730549752624854	0.994471326927473	0.651672651836321	0.6721919911610343	0.08562095909745432	0.38111534374570477	0.5322114965656705	0.08022599718039156	0.0373963449240439	8.119116804132827e-10	9.09049121065451	-0.342798675091152	
RPLSIQDSFVEVS(ph)PVCPRPR	ddPTM_K562_Methotrexat_30min_R1	3	RPLSIQDSFVEVSPVCPRPR	20	2	Q9NPR2	Q9NPR2	SEMA4B	Semaphorin-4B	1	RPLSIQDSFVEVS(1)PVCPRPR;RPLSIQDSFVEVS(1)PVCPRPR;RPLSIQDSFVEVS(1)PVCPRPR	103.25	0.00078144	26163500.0	2618.97	1982.42	2497.64	2450.81	2324.09	2454.84	2093.14	3081.34	2626.8	2436.61	True	False	2503.843214666132	2309.9812096215196	1973.4194962701145	2235.9512924279998	2629.748571484768	2929.203087197081	2562.5799272517665	2972.9675256798623	2504.680641347719	1995.3163177663532	1.2548602907578317	1.1577017583895752	0.9890258896289932	1.120599913166161	1.317960740394599	1.4680394587641936	1.2842975845155387	1.4899730429749283	1.255279986960449	1.0	10.962401759880802	-7.7757957560747	6.3564455124927965	1.3353358542863207	1.1217613054644684	0.2439916237745582	0.1413318877882122	0.17547499460174903	27.15679615677854	0.041730697872557454	0.049536340365191715	1.6757307685204296e-08	7.7757957560747	-0.21357454882185234	
RPNEDS(ph)DEDEEKGAVVPPVHDIYR	ddPTM_K562_Methotrexat_30min_R1	1	RPNEDSDEDEEKGAVVPPVHDIYR	24	2	H0YE74;E9PLP8;Q12996	H0YE74	CSTF3	Cleavage stimulation factor subunit 3	1	RPNEDS(1)DEDEEKGAVVPPVHDIYR	59.996	0.030019	81816000.0	1277.8	896.1	1654.4	1379.0	1239.7	825.55	638.89	1339.4	1126.3	1648.5	True	False	1221.6294419945182	1044.16529390434	1307.1640487136974	1258.1052110356213	1402.7422793737194	985.0758536750059	782.1773458640513	1292.2925428208532	1073.9385588358211	1349.9406757083957	0.904950464844283	0.7734897634345325	0.9683122171481715	0.9319707403996974	1.03911401783461	0.7297178842011534	0.5794160883800286	0.9572958027527462	0.7955450029478225	1.0	10.398680292870143	-8.278339485497062	24.977472890494024	0.795164767213833	0.9181824727756854	0.1567005260475981	0.12550438438721814	1477.8194004953968	2184132.235526146	0.044965169772618066	0.039753270814683175	5.268178899133067e-09	8.278339485497062	0.12301770556185243	
RPNPDILDHER	ddPTM_K562_Methotrexat_30min_R1	4	RPNPDILDHER	11	1	Q9UQ35;Q9UQ35-2;I3L4D8;I3L0N7	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	0	;;;	161.93	9.4355e-06	34741400.0	12990.1	12115.2	13925.900000000001	14608.4	12362.3	11590.5	12108.0	12867.400000000001	13041.800000000001	14609.5	False	True	12419.070757906553	14117.03087681048	11003.043898683554	13327.70425300417	13988.159135518055	13830.200087238994	14823.527217082656	12414.846248688245	12435.489564614234	11963.577981050532	1.0380732902462364	1.1800007405118156	0.9197118049559758	1.1140232691352303	1.1692287338849898	1.1560254055387995	1.239054674158691	1.0377201760503831	1.0394456896014868	1.0	13.546361304498822	-5.996038871997144	16.482849528810736	1.1005729014810754	0.9655255861208031	0.030502344106338675	0.09163413478954818	9368350.556434965	271237858.10798794	0.02328190975034385	25630339.245513305	1.0091625558485657e-06	5.996038871997144	-0.13504731536027237	
RPPEEDFRHS(ph)PEEDFR	ddPTM_K562_Methotrexat_30min_R1	1	RPPEEDFRHSPEEDFR	16	2	Q8IXT5	Q8IXT5	RBM12B	RNA-binding protein 12B	1	RPPEEDFRHS(1)PEEDFR	64.327	0.03368	74549000.0	1930.1	1701.2	2057.4	1726.1	1944.4	1702.6	1385.2	2573.1	2016.0	1806.9	True	False	1845.2551150364843	1982.2943845442062	1625.5798560345506	1574.7754929431362	2200.1226813053645	2031.6033534819987	1695.866361174669	2482.6026145530354	1922.2766000293122	1479.6529007810134	1.2470864714707706	1.339702293353989	1.0986224236620032	1.0642870987593873	1.4869181009573675	1.3730269797799513	1.146124445996443	1.6778276940778676	1.2991402233690525	1.0	10.531043070616542	-7.761031279030077	24.999999318479798	1.3573045631098497	1.1919585562946737	0.11470950064874641	0.185824554406176	21.20188778901897	1298758.631215817	0.05513098123876099	0.06684779121624954	1.7336791291298625e-08	7.761031279030077	-0.16534600681517597	
RPPES(ph)PPIVEEWNSR	ddPTM_K562_Methotrexat_30min_R1	2	RPPESPPIVEEWNSR	15	1	A0A3B3IU46;Q9BTL3	A0A3B3IU46	FAM103A1	RNMT-activating mini protein	1	RPPES(1)PPIVEEWNSR;RPPES(1)PPIVEEWNSR	146.67	5.31e-09	137528000.0	1225.27	1273.48	1446.3	1326.8	1246.07	1063.31	1068.94	1425.56	1688.2600000000002	1609.94	True	False	1171.4085978968728	1483.9009245411225	1142.7413948589347	1210.4815039898924	1409.950046026627	1268.7796087107624	1308.677005568908	1375.4222467848997	1609.7731610939916	1318.3642653624354	0.8885318183095909	1.1255621557166364	0.8667872945909834	0.9181692312155589	1.0694692529754009	0.9623892592097515	0.9926520613095773	1.0432793749963925	1.2210382239474946	1.0	10.364533328167298	-9.473256530044393	4.037728687896402	1.1171175365773425	0.9783718398604587	0.2683770712536263	0.08925448293672286	0.2682991734888102	9.037060212332564	0.05513126346537092	0.02265960419956453	3.3631285665629605e-10	9.473256530044393	-0.13874569671688375	
RPPGS(ph)PVYGNSHESAQSR	ddPTM_K562_Methotrexat_30min_R1	3	RPPGSPVYGNSHESAQSR	18	1	A0A494C0S0	A0A494C0S0			1	RPPGS(0.999)PVY(0.001)GNSHESAQSR;RPPGS(0.997)PVY(0.003)GNSHESAQSR;RPPGS(1)PVYGNSHESAQSR	100.9	0.0017358	17235200.0	3476.0000000000005	3086.61	4494.2	3891.56	3574.33	3312.58	2869.4399999999996	3139.0600000000004	3689.49	3853.38	True	False	3323.19920204488	3596.619839100632	3550.928836876871	3550.39297683668	4044.4170456028587	3952.6892027941967	3512.9849634775032	3028.657480563855	3517.9664151994775	3155.4955419843586	1.0531465368368291	1.139795569743974	1.1253157514029766	1.1251459333718428	1.2817058340888972	1.2526365986587693	1.1132910557903481	0.9598040752291033	1.1148697148807176	1.0	11.623650869846111	-9.008378194464942	24.427319506761073	1.0297116277194176	1.1654637304823439	0.4288671786853542	0.07116493067165254	297.9825221580264	868791.1641969717	0.03303007847891122	0.021056618203812518	9.808933845685376e-10	9.008378194464942	0.13575210276292626	
RPPS(ph)PDVIVLS(ph)DNEQPS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	1	RPPSPDVIVLSDNEQPSSPR	20	1	Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9	Q86YP4-2	GATAD2A	Transcriptional repressor p66-alpha	3	RPPS(1)PDVIVLS(0.596)DNEQPS(0.862)S(0.542)PR	106.72	0.00024578	293300000.0	2545.7	2110.3	2884.2	2288.9	2465.2	2237.2	2165.1	2614.9	2094.1	2410.2	True	False	2433.794076135113	2458.9912060331767	2278.845834925077	2088.235690746507	2789.417009850844	2669.5072374074525	2650.678789040769	2522.93248486057	1996.7457480760836	1973.6894246844845	1.2331190742049911	1.245885586292926	1.1546121727279228	1.0580366214812817	1.4133008846094224	1.3525467604074546	1.3430070384374222	1.278282415311562	1.0116818396568572	1.0	10.946679273079015	-9.764857813825538	24.050277532589618	1.005840607347845	1.2601253752026111	0.5282860557616684	0.09600872335163865	48.415010954911764	340578.48792229	0.08932558334392258	0.02678118084805766	1.718470915169104e-10	9.764857813825538	0.25428476785476617	
RPPS(ph)PDVIVLS(ph)DNEQPS(ph)SPRVNGLTTVALK	ddPTM_K562_Methotrexat_30min_R1	2	RPPSPDVIVLSDNEQPSSPRVNGLTTVALK	30	2	Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9	Q86YP4-2	GATAD2A	Transcriptional repressor p66-alpha	3	RPPS(1)PDVIVLS(0.806)DNEQPS(0.635)S(0.435)PRVNGLT(0.094)T(0.031)VALK;RPPS(1)PDVIVLS(0.788)DNEQPS(0.617)S(0.262)PRVNGLT(0.193)T(0.139)VALK	72.959	3.6621999999999996e-05	37276000.0	4636.0	3395.7	5521.9	5352.4	3159.8	3267.9	3797.3	4347.9	4488.9	6314.1	True	False	4432.206990989662	3956.781707968942	4362.928651228338	4883.163402137099	3575.369084750406	3899.375425140272	4648.941187762467	4194.98189258682	4280.21201878551	5170.555305120036	0.8572013506171687	0.7652527580646552	0.843802724033923	0.944417594238214	0.6914864794522109	0.7541502208242499	0.899118356428554	0.8113213465549486	0.8278050936902499	1.0	12.336103515477207	-11.566258483393975	0.7470204780962036	1.015417089261809	0.818202653977313	0.37603914446722353	0.06899426443211297	21.197735687634186	8.089839234441863	0.976935435189984	0.024753892232077246	2.7148229795278175e-12	11.566258483393975	-0.19721443528449611	
RPPS(ph)PDVIVLS(ph)DNEQPSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	RPPSPDVIVLSDNEQPSSPR	20	1	Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9	Q86YP4-2	GATAD2A	Transcriptional repressor p66-alpha	3	RPPS(1)PDVIVLS(0.87)DNEQPS(0.185)S(0.945)PR	71.265	0.013678999999999998	38105000.0	639.68	897.45	856.84	906.67	706.35	896.37	756.78	801.29	994.13	854.95	True	False	611.5604331312047	1045.7383584582635	677.0009934114144	827.1836487959872	799.2474058527281	1069.5808163753438	926.5071793313356	773.1081765245049	947.9131132872723	700.1102703651152	0.8735201567779733	1.4936766431278026	0.9669919469376601	1.1815048054710038	1.1416021728061665	1.5277319325961976	1.3233732149767663	1.1042662981094684	1.3539483041620362	1.0	9.451438360374969	-6.228595040771113	23.72531799684456	1.2351486235418279	0.8735187878936165	0.2598525905906677	0.18174167131462163	10965.064725012287	7920426.821058585	0.044092849114086285	6.5051892857717855	5.90751671649524e-07	6.228595040771113	-0.3616298356482114	
RPPS(ph)PDVIVLS(ph)DNEQPSSPR	ddPTM_K562_Methotrexat_30min_R1	3	RPPSPDVIVLSDNEQPSSPR	20	1	Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9	Q86YP4-2	GATAD2A	Transcriptional repressor p66-alpha	2	RPPS(1)PDVIVLS(0.964)DNEQPS(0.02)S(0.016)PR;RPPS(1)PDVIVLS(1)DNEQPSSPR;RPPS(1)PDVIVLS(0.998)DNEQPS(0.001)S(0.001)PR	150.22	5.0115e-13	342209000.0	4680.200000000001	4487.6	5352.3	5744.7	5096.2	4628.2	4511.9	5055.4	4947.5	5822.5	True	False	4474.464011913246	5229.099623842336	4228.925373507206	5241.07107022214	5766.439625832339	5522.534148117811	5523.808428374231	4877.598716572004	4717.491804883447	4767.9888288214315	0.9384384428222875	1.09670970540736	0.886941124514448	1.0992205012186758	1.2094071175199685	1.1582523253274675	1.1585195827188264	1.0229887048157507	0.9894091564072589	1.0	12.219165140297983	-6.255500000467493	23.448810188847304	1.0749898137058833	0.9384383001156792	0.15174449141136082	0.09167917359672656	566.4982292971363	2236386.3531086906	0.024664428555257824	0.21051451681239505	5.552646165218528e-07	6.255500000467493	-0.13655151359020412	
RPPS(ph)PDVIVLSDNEQPS(ph)S(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	RPPSPDVIVLSDNEQPSSPR	20	1	Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9	Q86YP4-2	GATAD2A	Transcriptional repressor p66-alpha	3	RPPS(1)PDVIVLS(0.292)DNEQPS(0.748)S(0.961)PR;RPPS(1)PDVIVLS(0.542)DNEQPS(0.754)S(0.704)PR	76.294	0.008434899999999999	297111000.0	3126.6	2576.8	3824.8999999999996	3084.0	2656.0	2711.6000000000004	2485.5	2993.9	3159.3999999999996	3076.7	True	False	2989.1584076851314	3002.572401888968	3022.105760351197	2813.630508218895	3005.310554179721	3235.5783233300767	3042.9366450329476	2888.602840041327	3012.520183597525	2519.479816167437	1.1864188744453434	1.1917429870330924	1.1994959201333635	1.1167505650031013	1.1928297797405323	1.2842247445553856	1.2077638508975153	1.1465076328475572	1.1956913344835154	1.0	11.298910183425882	-11.067326503204749	1.0157341624835812	0.9979400686548339	1.1933490287017503	0.6649123501930274	0.0407304302639087	6.817569403836627	5.787856915663327	0.09752674726297286	0.013379466158843707	8.56393765108638e-12	11.067326503204749	0.19540896004691644	
RPPS(ph)PDVIVLSDNEQPS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	4	RPPSPDVIVLSDNEQPSSPR	20	1	Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9	Q86YP4-2	GATAD2A	Transcriptional repressor p66-alpha	2	RPPS(1)PDVIVLS(0.001)DNEQPS(0.567)S(0.432)PR;RPPS(1)PDVIVLSDNEQPS(0.577)S(0.423)PR;RPPS(1)PDVIVLS(0.247)DNEQPS(0.412)S(0.342)PR;RPPS(1)PDVIVLS(0.053)DNEQPS(0.513)S(0.434)PR	188.96	1.4673e-13	227894000.0	4931.73	3941.7200000000003	5389.349999999999	4468.5	4704.43	4047.98	3885.17	5724.99	4866.42	4984.09	True	False	4714.937054286765	4593.022232215844	4258.199084825415	4076.753542793814	5323.145003915551	4830.194844842043	4756.518272050961	5523.63885674478	4640.181196386235	4081.4230041804417	1.1552189149366383	1.1253482492531137	1.0433123644532578	0.998855923195943	1.3042375167835487	1.183458524121284	1.1654068365810273	1.3533610339058542	1.1369027889619574	1.0	11.994856525865282	-7.757187330090651	24.999855491409352	1.2066163226063622	1.0812047949859356	0.22133187259232756	0.09823067328068891	144.16361960143306	847601.6448786445	0.028503928868466907	0.0355002350038454	1.7490920664370433e-08	7.757187330090651	-0.12541152762042662	
RPPS(ph)PDVIVLSDNEQPSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	RPPSPDVIVLSDNEQPSSPR	20	1	Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9	Q86YP4-2	GATAD2A	Transcriptional repressor p66-alpha	2	RPPS(1)PDVIVLSDNEQPS(0.106)S(0.894)PR	193.11	2.1523999999999996e-105	0.0	1146.6	1564.0	1930.8	1423.6	1692.0	1412.4	1312.4	1985.1	1559.9	1466.8	True	False	1096.1968369000747	1822.4244165454627	1525.5514659431863	1298.7951982815885	1914.5276572560563	1685.3263106178654	1606.7391080029126	1915.282907834608	1487.3805894770471	1201.1483064173938	0.9126240540351318	1.5172351380830889	1.270077523143977	1.0812946172778957	1.593914462541619	1.4030959387892787	1.3376692115524473	1.5945432363362595	1.238298869115825	1.0	10.230198577024058	-6.247797050642433	24.28450368739659	1.3559056832899579	0.9126236126822739	0.30350256987441404	0.19117026481135815	1828.5601055378315	3254912.2625393216	0.04556786271633832	0.8528891694219692	5.652010361677585e-07	6.247797050642433	-0.443282070607684	
RPPS(ph)PDVIVLSDNEQPSSPR	ddPTM_K562_Methotrexat_30min_R1	4	RPPSPDVIVLSDNEQPSSPR	20	1	Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9	Q86YP4-2	GATAD2A	Transcriptional repressor p66-alpha	1	RPPS(1)PDVIVLSDNEQPSSPR;RPPS(1)PDVIVLSDNEQPSSPR;RPPS(1)PDVIVLSDNEQPSSPR;RPPS(1)PDVIVLSDNEQPSSPR	125.73	6.0985e-06	338633000.0	3755.12	3545.14	4681.7	4581.06	4361.95	3898.0700000000006	3893.4700000000003	4524.450000000001	4268.28	4603.33	True	False	3590.0494210537304	4130.914127923261	3699.075149215981	4179.4455823544895	4935.622880950389	4651.316858984834	4766.6797583329035	4365.32252901733	4069.848594431111	3769.6223298202794	0.9523631565565587	1.0958429695317	0.9812853452065418	1.1087173240916548	1.3093149522980727	1.2338946589396371	1.2644979632641766	1.1580264936581728	1.079643592472338	1.0	11.880204274949456	-7.522221800969605	24.985024577673517	1.191390207970162	1.0228599885996343	0.3837530477978418	0.09127597853930368	22.829938386219812	868293.8279380371	0.026595415815573707	0.03476069969625575	3.004541444518332e-08	7.522221800969605	-0.1685302193705276	
RPPSPDVIVLS(ph)DNEQPSSPR	ddPTM_K562_Methotrexat_30min_R1	1	RPPSPDVIVLSDNEQPSSPR	20	1	Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9	Q86YP4-2	GATAD2A	Transcriptional repressor p66-alpha	1	RPPSPDVIVLS(0.998)DNEQPS(0.002)S(0.001)PR	98.53299999999999	0.00021726	20054000.0	1065.2	812.74	1295.0	985.86	951.01	1113.0	892.77	1057.0	1218.0	1147.4	True	False	1018.3750834344668	947.0314707820708	1023.1971972220977	899.4311844463937	1076.0844842358647	1328.0714979592778	1092.996398545992	1019.8247108866963	1161.3754458510434	939.594741466675	1.083845022211191	1.00791482645357	1.088977143087159	0.9572543829294027	1.1452644813189714	1.413451394892019	1.1632636394280604	1.0853878442261022	1.2360386819940865	1.0	9.875894828964363	-7.965874189966548	10.202431233216322	1.19449940646572	1.0381437745149507	0.29227571736151636	0.10606960090416162	0.5176044215683906	150.0593881931459	0.032808061818066565	0.037135804828764246	1.0817472754500256e-08	7.965874189966548	-0.1563556319507693	
RPPSPDVIVLSDNEQPS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	1	RPPSPDVIVLSDNEQPSSPR	20	1	Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9	Q86YP4-2	GATAD2A	Transcriptional repressor p66-alpha	1	RPPSPDVIVLS(0.323)DNEQPS(0.489)S(0.188)PR	79.025	0.0033564	16198000.0	618.14	539.19	1050.4	844.0	824.38	834.3	701.54	874.29	654.36	663.87	True	False	590.9673057399376	628.2819828370509	829.9353945653214	770.0078303945354	932.8004196742011	995.5166673382076	858.8782031608988	843.5407251477106	623.9389464261815	543.6367099681725	1.0870629133461869	1.1557019077571749	1.526636040847776	1.4164014612619078	1.7158525216753895	1.831216783348738	1.5798752869562145	1.5516625527313934	1.1477130498834605	1.0	9.086499069538682	-6.726549155275077	4.822116606327773	1.5154218351301294	1.1065613203394813	0.24531668739748347	0.2360980465614021	0.22637394941229025	12.224693610325819	0.06107489660587935	0.16295974768997198	1.8769419661704257e-07	6.726549155275077	-0.4088605147906481	
RPQS(ph)PGASPS(ph)QAER	ddPTM_K562_Methotrexat_30min_R1	1	RPQSPGASPSQAER	14	1	Q96T58;A0A669KB49	Q96T58	SPEN	Msx2-interacting protein	2	RPQS(0.887)PGAS(0.128)PS(0.985)QAER	110.6	0.004943199999999999	1444400.0	836.39	803.31	967.46	1036.2	987.72	908.18	763.94	857.37	1050.7	1117.7	True	False	799.6232970651088	936.0433235646642	764.403367123159	945.3579548042864	1117.622492686142	1083.6729317310471	935.2729915938323	827.2158111380578	1001.8531863347213	915.2736992655591	0.8736439140628083	1.0226922551317394	0.8351636977403998	1.0328691358255653	1.2210800917615716	1.183987841670329	1.0218506140232384	0.9037906495093638	1.094594094792231	1.0	9.838059414622752	-7.505500474303387	24.06347136597275	1.074522181613541	0.9237686825214988	0.35815635256658296	0.09565100525135042	563.0543905091947	779653.8195752071	0.02937596257673873	0.04242910309055893	3.122478996087442e-08	7.505500474303387	-0.15075349909204228	
RPQY(ph)SNPPVQGEVMEGADNQGAGEQGRPVR	ddPTM_K562_Methotrexat_30min_R1	1	RPQYSNPPVQGEVMEGADNQGAGEQGRPVR	30	2	P67809;H0Y449;C9J5V9	P67809	YBX1	Nuclease-sensitive element-binding protein 1	1	RPQY(0.5)S(0.5)NPPVQGEVMEGADNQGAGEQGRPVR	63.268	0.00068933	34064000.0	1023.5	794.54	1007.2	882.02	892.38	851.81	875.77	961.14	879.94	1054.1	True	False	978.5081655042965	925.8242301291762	795.8024842023915	804.6946760243933	1009.7436115733803	1016.4102270230836	1072.183715799841	927.3361614206615	839.0317814631915	863.1922755621587	1.133592356195539	1.0725585206682116	0.9219295708874605	0.9322310901129548	1.16977832188753	1.1775015321599593	1.2421145857701001	1.0743100786168744	0.9720102985360561	1.0	9.753538144431483	-6.267176483601898	7.244098792101751	1.0688502315941166	1.13432245268677	0.03789601109465224	0.10315942505541452	0.47688679820243024	216.06929701229615	0.028764472645219315	0.15394110002366787	5.405346220593932e-07	6.267176483601898	0.06547222109265327	
RPQYS(ph)NPPVQGEVMEGADNQGAGEQGRPVR	ddPTM_K562_Methotrexat_30min_R1	2	RPQYSNPPVQGEVMEGADNQGAGEQGRPVR	30	2	P67809;H0Y449;C9J5V9	P67809	YBX1	Nuclease-sensitive element-binding protein 1	1	RPQY(0.012)S(0.988)NPPVQGEVMEGADNQGAGEQGRPVR;RPQY(0.212)S(0.788)NPPVQGEVMEGADNQGAGEQGRPVR	73.994	2.112e-05	67050000.0	1372.6	1663.7199999999998	1415.95	1286.7	1189.9299999999998	1176.53	1245.3600000000001	1523.25	1328.3	1343.45	True	False	1312.2621475048334	1938.6214515952772	1118.7614451016448	1173.8970087306263	1346.4266520086865	1403.8777713333595	1524.6636814557355	1469.6764341136807	1266.5476229260598	1100.1381867033328	1.1928157420270538	1.762161767518077	1.0169281083262078	1.0670450520841557	1.2238704812559775	1.2760922112341275	1.3858837915848854	1.3359016638788839	1.1512623034397056	1.0	10.10346903454871	-6.774582573780748	24.9999978573967	1.2021337408062363	1.4774889064149874	0.3016922931811127	0.17767219154736952	255.34062116624526	485691.47785390087	0.04625574995357305	0.09721673774799325	1.6804183920793983e-07	6.774582573780748	0.2753551656087512	
RPQYSNPPVQGEVMEGADNQGAGEQGRPVR	ddPTM_K562_Methotrexat_30min_R1	1	RPQYSNPPVQGEVMEGADNQGAGEQGRPVR	30	2	P67809;H0Y449;C9J5V9	P67809	YBX1	Nuclease-sensitive element-binding protein 1	0		75.226	2.2222e-05	23774000.0	1465.5	1028.4	1531.9	1293.7	1095.2	1134.9	1310.2	1316.3	1467.3	1591.7	False	True	1401.078374740152	1198.3256201888453	1210.3751246521474	1180.2833295988275	1239.2379965879622	1354.2033630134624	1604.04570200047	1270.0049829140573	1399.085543265383	1303.4277061116488	1.0749183619242006	0.919364852051257	0.9286093267595995	0.9055226646361674	0.9507531493900988	1.0389554838091375	1.2306364936691556	0.9743578235748132	1.073389445924161	1.0	10.348094851481415	-8.339634434661312	4.451234585049827	1.0750565685709976	0.9493831711879546	0.32762863063330916	0.07708948793676146	0.24844133676577915	9.15435496300356	0.027692491172871717	0.024433487900119972	4.57473103426854e-09	8.339634434661312	-0.12567339738304306	
RPS(ph)ASSPNNNTAAK	ddPTM_K562_Methotrexat_30min_R1	1	RPSASSPNNNTAAK	14	1	O75151;E7ET14;A0A087WW48	O75151	PHF2	Lysine-specific demethylase PHF2	1	RPS(0.93)AS(0.065)S(0.004)PNNNTAAK	137.21	2.0620999999999998e-05	877200.0	571.62	435.02	595.27	581.05	341.69	335.2	335.64	467.92	381.96	573.76	True	False	546.4922692384621	506.8996609243008	470.3309618458674	530.1102486383229	386.6282241180979	399.97265598917335	410.91581393637426	451.4629883804193	364.2027629698395	469.84650415192533	1.1631293718464133	1.0788622591526067	1.0010310977939838	1.1282626218432206	0.82288198528999	0.8512836691445124	0.8745745904358251	0.9608733584073625	0.7751526503899967	1.0	8.876045704293405	-7.759572927866074	24.99996247085791	0.8770515093958662	1.0852678361099373	0.6776360097202153	0.07153889763974641	29.036327607512458	388919.1510693714	0.02089303893338028	0.025603407003718194	1.7395105703437816e-08	7.759572927866074	0.2082163267140711	
RPS(ph)PQPSPR	ddPTM_K562_Methotrexat_30min_R1	1	RPSPQPSPR	9	1	Q9UQ35;Q9UQ35-2;I3L4U6	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	RPS(1)PQPSPR	82.774	0.017969	508210.0	0.0	0.0	0.0	0.0	0.0	63.261	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	75.48529293117863	0.0	0.0	0.0	0.0											0.0														
RPS(ph)QEQSASASSGQPQAPLNR	ddPTM_K562_Methotrexat_30min_R1	4	RPSQEQSASASSGQPQAPLNR	21	1	Q5T1M5-2;Q5T1M5	Q5T1M5-2	FKBP15	FK506-binding protein 15	1	RPS(1)QEQSASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(0.999)QEQS(0.001)ASASSGQPQAPLNR	206.11	1.0071000000000001e-45	74491000.0	3733.02	3073.14	4700.93	3120.5	3492.1000000000004	3325.0699999999997	3432.01	4188.110000000001	3988.99	4007.2	True	False	3568.9209105919394	3580.924150551483	3714.269035009477	2846.9306098888005	3951.3723592812494	3967.592718526015	4201.725606565893	4040.8117974566567	3803.5427255708955	3281.457249438084	1.0876024398011221	1.09126033903525	1.131896213380658	0.8675811974622885	1.20415171032866	1.2090947456973344	1.2804450240165084	1.231407722330865	1.1591017150146365	1.0	11.680120922570294														
RPS(ph)QNAISFFNVGHSK	ddPTM_K562_Methotrexat_30min_R1	1	RPSQNAISFFNVGHSK	16	1	Q9BXB4	Q9BXB4	OSBPL11	Oxysterol-binding protein-related protein 11	1	RPS(0.999)QNAIS(0.001)FFNVGHSK	149.82	5.130399999999999e-10	15717000.0	1874.9	1545.6	3188.3	1908.6	1528.6	1828.4	1721.1	2547.1	2123.1	2776.1	True	False	1792.4816409418706	1800.984129291985	2519.1194006974624	1741.2760012926644	1729.6376931924385	2181.71242306266	2107.1004867295123	2457.517049289976	2024.3975444058706	2273.3213890409934	0.7884858030117923	0.7922259201774083	1.108122860604483	0.7659612097466018	0.7608416924815417	0.9597025891631721	0.9268819168671959	1.0810249096924593	0.8905021323271268	1.0	11.150585943124428	-8.415502239134943	7.436102721971941	0.9760775554204295	0.8508447432436517	0.2718427389291014	0.10496219727294859	0.40972655017667264	25.16947512457812	0.038103916750079576	0.03350720502051525	3.841472785875981e-09	8.415502239134943	-0.12523281217677784	
RPS(ph)SLQSLFGLPEAAGAR	ddPTM_K562_Methotrexat_30min_R1	2	RPSSLQSLFGLPEAAGAR	18	1	A0A2R8YDI1;A0A2R8Y852;P39880-6;P39880-4;P39880-5;P39880-2;P39880;P39880-3	A0A2R8YDI1	CUX1	Homeobox protein cut-like 1	1	RPS(0.875)S(0.125)LQSLFGLPEAAGAR;RPS(0.748)S(0.25)LQS(0.002)LFGLPEAAGAR	73.672	0.013225	6967800.0	1483.9	1463.3400000000001	1787.02	1959.8999999999999	1182.3	1236.33	1415.12	1626.25	1620.74	1858.02	True	False	1418.6695327716914	1705.1320624729124	1411.9489230732295	1788.0786099410539	1337.7931732705883	1475.2332749972984	1732.4966828078955	1569.0538657327252	1545.3921511565015	1521.5145734180849	0.9324061415886724	1.120680729756226	0.9279890891227444	1.1751965056267142	0.8792509757334982	0.9695820866724822	1.138665848540536	1.031244717037342	1.0156932954541313	1.0	10.571292437047168														
RPS(ph)VNGEPGSVPPPR	ddPTM_K562_Methotrexat_30min_R1	2	RPSVNGEPGSVPPPR	15	1	Q8N3D4	Q8N3D4	EHBP1L1	EH domain-binding protein 1-like protein 1	1	RPS(0.994)VNGEPGS(0.006)VPPPR;RPS(0.867)VNGEPGS(0.133)VPPPR	86.54799999999999	0.014621	14909700.0	1200.12	1189.24	1305.31	1427.66	1336.55	1296.21	1016.4100000000001	1327.5	1367.9	1410.17	True	False	1147.3641617831133	1385.7416963762955	1031.3432691165835	1302.4992643851454	1512.3297519536536	1546.6842375290153	1244.365815883298	1280.8110725658375	1304.3066275694925	1154.7745481733134	0.993582828438744	1.2000105982317837	0.8931122276188194	1.1279251577249525	1.3096320440608438	1.3393819944989664	1.0775833411393636	1.1091438364240844	1.1294902798409587	1.0	10.173395499956175	-6.244083264324127	22.983907252569086	1.1379880282866532	0.9935824648584425	0.09664075545797302	0.12550977826203483	2940.7687590562423	3894132.877014699	0.0331490279136037	0.841363901034406	5.700549690450967e-07	6.244083264324127	-0.14440556342821076	
RPSASS(ph)PNNNTAAK	ddPTM_K562_Methotrexat_30min_R1	1	RPSASSPNNNTAAK	14	1	O75151;E7ET14;A0A087WW48	O75151	PHF2	Lysine-specific demethylase PHF2	1	RPS(0.143)AS(0.159)S(0.697)PNNNT(0.001)AAK	113.01	0.0013354	598270.0	301.18	213.27	473.86	506.85	266.42	225.0	303.03	398.19	313.56	415.29	True	False	287.9404878227492	248.5092425298277	374.4032616800487	462.4152474353914	301.458899790874	268.4780656251908	370.99219132743286	384.1854320037595	298.9826640402734	340.07695675762164	0.8466921445311835	0.7307441377362838	1.1009368739643597	1.3597370778784117	0.8864431823463083	0.7894626798149675	1.0909065843936172	1.1297014524791067	0.8791617841174789	1.0	8.409717443695278	-6.760238910965568	24.999647448752643	1.0344750037808506	0.7887180910182976	0.2814238104413518	0.15376684117210587	40.358818246962905	840372.8819426626	0.04226930361762869	0.09980011591012931	1.736845105123213e-07	6.760238910965568	-0.24575691276255296	
RPSQEQSASASS(ph)GQPQAPLNR	ddPTM_K562_Methotrexat_30min_R1	1	RPSQEQSASASSGQPQAPLNR	21	1	Q5T1M5-2;Q5T1M5	Q5T1M5-2	FKBP15	FK506-binding protein 15	1	RPS(0.22)QEQS(0.133)AS(0.173)AS(0.173)S(0.302)GQPQAPLNR	75.102	0.0041412	25173000.0	1027.5	929.13	923.91	1016.5	1026.4	889.63	824.3	1004.2	1002.1	1456.8	True	False	982.3323302937611	1082.6529399903354	729.9939169771951	927.3850232180623	1161.3895906664397	1061.53840676506	1009.1702580972277	968.8817168140222	955.5125897268725	1192.9594033193753	0.8234415417326437	0.9075354425120291	0.6119184902235634	0.777381879582524	0.9735365574343156	0.8898361535282424	0.8459384747622094	0.8121665449118692	0.8009598541812791	1.0	10.220329233289231	-7.64392690760613	21.386987087585098	0.8757625278244981	0.777127065615757	0.24509530889737763	0.0906462298069369	4.886128562338349	878.0101682313872	0.027676770706179528	0.03573052785175586	2.2702469055937293e-08	7.64392690760613	-0.0986354622087412	
RPT(ph)LTTFFGR	ddPTM_K562_Methotrexat_30min_R1	2	RPTLTTFFGR	10	1	P16150;C9JUK7	P16150	SPN	Leukosialin	1	RPT(0.996)LT(0.003)TFFGR;RPT(0.999)LT(0.001)TFFGR	131.79	0.00097437	24725000.0	2309.4	1472.46	1663.55	1945.9699999999998	1722.15	1647.29	1327.04	1859.1	2272.3999999999996	2745.8	True	False	2207.8815411974806	1715.7589874594194	1314.3935887558462	1775.369831413334	1948.6429107231181	1965.605478772092	1624.6625006737163	1793.7143992520885	2166.7566199933585	2248.5090126539967	0.9819313726438827	0.7630652035653825	0.584562294995838	0.7895764799794156	0.8666378029870844	0.8741817211806577	0.7225510289398699	0.7977350275927524	0.9636415099069837	1.0	11.13475295140647	-9.796659702142415	4.2770053946511455	0.9952454348700711	0.7906260470323713	0.3591588501657593	0.09865816814299248	0.229935967751504	8.714688163950058	0.0952051686201468	0.02634890703746395	1.597130111962093e-10	9.796659702142415	-0.20461938783769984	
RPTPNDDTLDEGVGLVHS(ph)NIATEHIPSPAKK	ddPTM_K562_Methotrexat_30min_R1	1	RPTPNDDTLDEGVGLVHSNIATEHIPSPAKK	31	2	Q01581	Q01581	HMGCS1	Hydroxymethylglutaryl-CoA synthase, cytoplasmic	1	RPTPNDDTLDEGVGLVHS(0.665)NIAT(0.167)EHIPS(0.167)PAKK	75.718	2.9767000000000002e-06	57690000.0	2296.3	1615.0	3172.1	2487.8	1715.4	1161.6	1214.8	1691.7	1381.9	2740.0	True	False	2195.357401511984	1881.851299693684	2506.319559311363	2269.6984365586786	1941.005167409597	1386.0627601343188	1487.2498235308892	1632.201952135313	1317.655770625252	2243.7594488571444	0.9784281477366863	0.8387045681978976	1.1170179408438605	1.0115605029383814	0.8650682979399799	0.6177412471021828	0.6628383556394237	0.7274407035775037	0.5872535807242608	1.0	11.131702299047644	-8.029851195952812	4.039053053895395	0.699652415604623	0.9829049767111939	0.5080764800494142	0.12326935770050143	0.16732675806186662	6.04714943825294	0.03956740324708156	0.041726691551301015	9.335741202205742e-09	8.029851195952812	0.28325256110657093	
RPTPNDDTLDEGVGLVHSNIAT(ph)EHIPSPAKK	ddPTM_K562_Methotrexat_30min_R1	2	RPTPNDDTLDEGVGLVHSNIATEHIPSPAKK	31	2	Q01581	Q01581	HMGCS1	Hydroxymethylglutaryl-CoA synthase, cytoplasmic	1	RPTPNDDTLDEGVGLVHS(0.034)NIAT(0.483)EHIPS(0.483)PAKK;RPTPNDDTLDEGVGLVHS(0.057)NIAT(0.71)EHIPS(0.233)PAKK	85.182	1.5579e-06	53173000.0	4418.8	2769.6000000000004	7648.4	4744.2	3278.5	2645.09	2476.54	4027.6000000000004	4066.3999999999996	6157.299999999999	True	False	4224.554842921727	3227.229324849304	6043.105361570264	4328.283351845682	3709.6802153155913	3156.2162071312696	3031.9671369502703	3885.9470251345892	3877.3539515670627	5042.153304543098	0.8378473615856353	0.6400498219563246	1.1985167837172435	0.8584196255884956	0.735733324881868	0.6259659348888589	0.6013238697479502	0.7706919624266998	0.768987715639958	1.0	12.299824268059199	-7.732649855711968	5.069307457925776	0.7246433152090134	0.8911078296531522	0.12852804372781967	0.16298397779120083	0.33366826900619706	21.54376479500236	0.04989826245573886	0.06271060963518653	1.8507601689855794e-08	7.732649855711968	0.1664645144441388	
RPTPNDDTLDEGVGLVHSNIATEHIPS(ph)PAK	ddPTM_K562_Methotrexat_30min_R1	4	RPTPNDDTLDEGVGLVHSNIATEHIPSPAK	30	1	Q01581	Q01581	HMGCS1	Hydroxymethylglutaryl-CoA synthase, cytoplasmic	1	RPTPNDDTLDEGVGLVHS(0.028)NIAT(0.212)EHIPS(0.76)PAK;RPTPNDDTLDEGVGLVHS(0.015)NIAT(0.236)EHIPS(0.749)PAK;RPTPNDDTLDEGVGLVHSNIAT(0.008)EHIPS(0.992)PAK;RPTPNDDTLDEGVGLVHSNIAT(0.01)EHIPS(0.99)PAK	129.27	8.0773e-18	563280000.0	11482.599999999999	9408.3	16637.4	12559.800000000001	9134.4	8535.1	8639.9	11159.699999999999	11287.6	15843.8	True	False	10977.838652877017	10962.861661243387	13145.437103523494	11458.701834347488	10335.733707115678	10184.387279633624	10577.617509322139	10767.207025621829	10762.841939727618	12974.33429043899	0.8461196086928926	0.8449652533866118	1.0131877913158591	0.8831822564331183	0.7966292123929825	0.7849641493466585	0.815272465818687	0.8298851243224378	0.8295486842557264	1.0	13.663372895741757														
RPTPNDDTLDEGVGLVHSNIATEHIPS(ph)PAKK	ddPTM_K562_Methotrexat_30min_R1	1	RPTPNDDTLDEGVGLVHSNIATEHIPSPAKK	31	2	Q01581	Q01581	HMGCS1	Hydroxymethylglutaryl-CoA synthase, cytoplasmic	1	RPTPNDDTLDEGVGLVHS(0.018)NIAT(0.018)EHIPS(0.965)PAKK	89.891	3.6159e-07	46119000.0	1684.7	1239.1	2910.9	2043.5	1227.5	1050.6	1027.4	1515.9	1280.4	2608.4	True	False	1610.6426052028219	1443.840213901202	2299.941869802165	1864.3495277384272	1388.9377655329845	1253.6135810925578	1257.8206031409584	1462.5849377797006	1220.8744834709987	2135.993484087217	0.754048463725115	0.675957218342454	1.07675509636913	0.8728254751840347	0.6502537465026609	0.5868995343065242	0.5888691199254609	0.6847328649060525	0.5715721946561649	1.0	11.060691530709372	-7.76473779021725	24.93018794303532	0.6553741689152851	0.8493908068753242	0.2119751665930344	0.15073243521950103	110.58394706889142	835820.6893898707	0.04545951237923735	0.053698029153814233	1.718945905278977e-08	7.76473779021725	0.1940166379600391	
RPTPQDS(ph)PIFLPVDDTSFR	ddPTM_K562_Methotrexat_30min_R1	2	RPTPQDSPIFLPVDDTSFR	19	1	A0A0U1RQF0;P49327	A0A0U1RQF0	FASN	Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase	1	RPT(0.004)PQDS(0.996)PIFLPVDDTSFR;RPT(0.001)PQDS(0.999)PIFLPVDDTSFR	94.845	0.00090765	31627000.0	2639.0	2239.54	2748.51	2452.4	2619.09	2234.5699999999997	2564.04	3655.4	3592.5	3342.6000000000004	True	False	2522.9927198493792	2609.585919328788	2171.6353116115115	2237.401899596632	2963.546242223858	2666.3690271292553	3139.09123932017	3526.8375100995545	3425.4854591296184	2737.222749543755	0.9217345282805047	0.9533699512631035	0.7933717896994256	0.8173985474764763	1.0826836225578744	0.9741147400494499	1.146816144153193	1.2884729643166286	1.2514456339735538	1.0	11.418497127690125	-8.444418215657226	1.2751873468905597	1.2024946688933618	0.88235948472385	0.603809981270356	0.10042985005660966	0.2864470463576656	0.9487895496999963	0.05422036019063978	0.041671812163390415	3.594030715193229e-09	8.444418215657226	-0.3201351841695118	
RPWEEDFR	ddPTM_K562_Methotrexat_30min_R1	1	RPWEEDFR	8	1	Q8IXT5;B9ZVT1	Q8IXT5	RBM12B	RNA-binding protein 12B	0		132.76	0.00023189	7140000.0	3692.7	3246.0	3591.3	3632.4	3487.7	3194.6	3189.3	4404.9	3968.2	4201.3	False	True	3530.373329514135	3782.3463274338687	2837.535208018316	3313.95313166482	3946.393682158361	3811.9112375388204	3904.5817107236276	4249.977170278912	3783.719248133093	3440.4038585706303	1.0261508458431052	1.099390211998339	0.8247680576655365	0.9632453827794664	1.1470727985399807	1.1079836537337622	1.134919582477694	1.235313453009738	1.0997892700030567	1.0	11.748362213123844	-7.761087330108187	24.999995789060357	1.132672661611725	0.9760586765964376	0.4032177987323575	0.08415068539193422	9.087801589118037	645317.761173569	0.025950135008077465	0.031449593762496814	1.7334553908190823e-08	7.761087330108187	-0.15661398501528745	
RPWRPEEAVEDPDEEDEDNT(ph)SEAENGFSLEEVLR	ddPTM_K562_Methotrexat_30min_R1	1	RPWRPEEAVEDPDEEDEDNTSEAENGFSLEEVLR	34	2	Q03701	Q03701	CEBPZ	CCAAT/enhancer-binding protein zeta	1	RPWRPEEAVEDPDEEDEDNT(0.499)S(0.499)EAENGFS(0.002)LEEVLR	55.846000000000004	0.0023035	36995000.0	1146.6	881.38	1079.3	1368.7	1037.6	1065.8	1117.1	1073.9	1220.0	1686.5	True	False	1096.1968369000747	1027.0130641015598	852.7696795071894	1248.708196043839	1174.0625869792464	1271.7507659703476	1367.638111513299	1036.1303283076859	1163.28246628758	1381.058507480866	0.7937367106188744	0.7436419663167592	0.6174754182302477	0.9041674840565286	0.8501179208698459	0.9208522007442667	0.9902825290204058	0.750243615817298	0.8423122264454078	1.0	10.431558724217881	-7.28156980750016	24.765515028275114	0.8868926861155815	0.7208204213363499	0.5039055389311538	0.07966490321471893	607.6031280816244	747503.7751865089	0.022880193863760258	0.03398623447545929	5.229139074430156e-08	7.28156980750016	-0.16607226477923154	
RQAPGVGAVGGGSPEREEVGAGY(ph)NS(ph)EDEYEAAAAR	ddPTM_K562_Methotrexat_30min_R1	1	RQAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAAR	35	2	A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3	A0A087WXV6	OTUD5	OTU domain-containing protein 5	2	RQAPGVGAVGGGS(0.44)PEREEVGAGY(0.739)NS(0.759)EDEY(0.062)EAAAAR	55.022	0.0012554999999999999	31808000.0	745.0	481.52	519.44	562.52	655.33	402.35	362.67	545.12	517.51	713.13	True	False	712.2506920378122	561.0829955594439	410.41664256760356	513.2047449686421	741.5173815777846	480.0984431302023	444.00797950275586	525.9478206230425	493.4510730561356	583.9752466290128	1.2196590457374132	0.9607992783911408	0.7027980123074166	0.8788124975007209	1.2697753643809069	0.8221212215784187	0.7603198629835501	0.900633757439322	0.8449862830737666	1.0	9.18976340764299														
RQDDATGAGQDS(ph)ENEVSLVSGHQR	ddPTM_K562_Methotrexat_30min_R1	2	RQDDATGAGQDSENEVSLVSGHQR	24	1	P16157-10;P16157-8;P16157-5;P16157-16;P16157-3;P16157;P16157-21;P16157-12;P16157-14	P16157-10	ANK1	Ankyrin-1	1	RQDDAT(0.049)GAGQDS(0.942)ENEVS(0.005)LVS(0.003)GHQR;RQDDATGAGQDS(1)ENEVSLVSGHQR	138.54	1.4677e-16	413150000.0	1884.6999999999998	1494.63	2042.43	2245.12	1330.99	1421.5500000000002	1697.79	1631.54	1842.79	1947.64	True	False	1801.8508446760604	1741.5922031338514	1613.7518544573966	2048.293815373672	1506.0385144983672	1696.2444186199557	2078.5626258581733	1574.1578134343247	1757.1190951230246	1594.9035229825288	1.1297553856464826	1.0919733877551474	1.011817850549117	1.2842744315614065	0.9442818909083726	1.0635404550664704	1.3032528901630263	0.986992498762929	1.1017087051366885	1.0	10.639253441489632	-9.959985312229716	1.5517856010309135	1.007735185457622	1.1075578386493863	0.07209938544222294	0.110532185253083	1.1080108529261123	6.02406953765703	0.102202910426368	0.03014477662416648	1.0965152794884088e-10	9.959985312229716	0.09982265319176431	
RQDLPSSLPEPETQAPPRS(ph)	ddPTM_K562_Methotrexat_30min_R1	3	RQDLPSSLPEPETQAPPRS	19	2	B5MCT7;P49593-2;P49593	B5MCT7	PPM1F	Protein phosphatase 1F	1	RQDLPSSLPEPET(0.038)QAPPRS(0.962);RQDLPSSLPEPETQAPPRS(1);RQDLPSSLPEPETQAPPRS(1)	166.43	8.7602e-12	118140000.0	2970.2200000000003	2377.74	3065.54	3376.78	2159.63	2716.68	2516.17	3161.84	3046.6499999999996	3265.3399999999997	True	False	2839.652685241007	2770.621120330439	2422.125047082803	3080.742940189171	2443.659198841548	3241.6399614339693	3080.4851732579173	3050.6362950520297	2905.01190648775	2673.955284208464	1.0619671548028868	1.0361508798194394	0.9058210738927122	1.1521295656599295	0.9138743692809779	1.2123014848371145	1.152033166541823	1.1408703477833473	1.0864100546646511	1.0	11.3847596245174	-8.267672911244698	24.99958509710658	1.1292342880692148	1.0168850359779702	0.2759554812165127	0.08350558586350143	632.8451500527644	2538015.8597205826	0.02763221916203807	0.02494684604983808	5.399171078272584e-09	8.267672911244698	-0.11234925209124458	
RQDPQVVS(ph)PFSR	ddPTM_K562_Methotrexat_30min_R1	1	RQDPQVVSPFSR	12	1	Q12986-3;Q12986-2;Q12986	Q12986-3	NFX1	Transcriptional repressor NF-X1	1	RQDPQVVS(0.987)PFS(0.013)R	108.06	0.0019929	43538000.0	2563.5	1813.4	3642.3	2759.5	2068.6	1986.2	1619.9	2444.4	2671.4	3022.1	True	False	2450.8116094482316	2113.033527470295	2877.8310049745514	2517.5789194001422	2340.65715827416	2370.0050397544624	1983.2038106171274	2358.4290665008893	2547.2071970824927	2474.768405252256	0.990319580711803	0.8538308162435553	1.1628688158725748	1.0172987961447337	0.945808566695183	0.9576674062609447	0.8013694559895503	0.952989807650503	1.029270937707342	1.0	11.273077805317978	-7.807710488835638	6.38161706171192	0.9382108966721324	1.0063760162766118	0.08714197933899115	0.08922291180578382	0.4655069865513073	45.00545514314195	0.028789360309428358	0.033173745699417646	1.557003221583175e-08	7.807710488835638	0.06816511960447935	
RQDPQVVSPFS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	RQDPQVVSPFSR	12	1	Q12986-3;Q12986-2;Q12986	Q12986-3	NFX1	Transcriptional repressor NF-X1	1	RQDPQVVS(0.027)PFS(0.973)R	127.3	0.00023371	45604000.0	2838.3	2187.8	3793.3	3211.8	1897.3	1883.3	1649.8	2340.1	2595.5	3453.2	True	False	2713.5317304844616	2549.296763758415	2997.1381685116485	2930.2264806411963	2146.8282057399033	2247.2210710752083	2019.8096467412408	2257.7973566186934	2474.8357715159145	2827.7920178078452	0.959593815031715	0.9015149444175443	1.059886352899137	1.036224185579518	0.7591888626251102	0.7946910723714731	0.7142709343620799	0.7984311938078735	0.8751830954790131	1.0	11.465460299465919	-7.761573979529374	24.99999990968864	0.8066344243660135	0.9880756696074516	0.48225018871002034	0.08298208548261093	2.887435934609337	536339.2378174951	0.025022615799252697	0.030216297880502452	1.7315140523174917e-08	7.761573979529374	0.18144124524143812	
RQDS(ph)MEALQMDR	ddPTM_K562_Methotrexat_30min_R1	1	RQDSMEALQMDR	12	1	Q8TDR0-2;Q8TDR0	Q8TDR0-2	TRAF3IP1	TRAF3-interacting protein 1	1	RQDS(1)MEALQMDR	75.479	0.015279	4821000.0	2418.7	1792.9	1978.8	2140.0	2000.6	1885.5	2143.0	2612.4	2866.6	3006.2	True	False	2312.3768440696053	2089.146250910715	1563.4769219019968	1952.3895225643437	2263.71396637498	2249.8461899390986	2623.622301470774	2520.520411277586	2733.3323916885056	2461.748049326404	0.9393231142002244	0.8486434066566471	0.6351084231913187	0.7930907158019549	0.9195555032507852	0.9139221987216414	1.0657558161521294	1.0238742392696376	1.110321745735277	1.0	11.265467399617062	-8.351106964913534	1.4448107510617785	1.054663909735643	0.8000178083886269	0.6362059393466903	0.0802856972979127	0.27027459162843337	1.1331475339022814	0.04048542908639106	0.034070730824646414	4.4554649864443405e-09	8.351106964913534	-0.25464610134701604	
RQEEIDYRPDGGAGDADFHYR	ddPTM_K562_Methotrexat_30min_R1	2	RQEEIDYRPDGGAGDADFHYR	21	2	Q96S66-4;Q96S66-3;Q96S66-2;Q96S66	Q96S66-4	CLCC1	Chloride channel CLIC-like protein 1	0	;	60.13399999999999	0.0083067	39673000.0	1851.67	1610.65	2265.6	1727.1399999999999	1949.76	2052.19	1657.66	2180.4	2220.1000000000004	2066.8	False	True	1770.2728039270557	1876.7825361310413	1790.081521255895	1575.724317757841	2206.1876152550653	2448.746673312712	2029.4324518226988	2103.7140961375167	2116.888035577915	1692.4824922985204	1.0459622548431151	1.1088933236657754	1.0576661970812045	0.9310136588874767	1.303521676173379	1.4468372254693915	1.1990862304676337	1.242975396029363	1.2507591926123973	1.0	10.724925194737253	-7.772820081696282	24.99869659520889	1.2609219268973888	1.0426546951417022	0.43748034211328046	0.11215887382583037	191.17529384432765	419931.71668120404	0.034354891874533194	0.039292122383955005	1.6872518706084888e-08	7.772820081696282	-0.21826723175568663	
RQES(ph)S(ph)SSLEMPSGVALEEGAHVLR	ddPTM_K562_Methotrexat_30min_R1	1	RQESSSSLEMPSGVALEEGAHVLR	24	1	P48553	P48553	TRAPPC10	Trafficking protein particle complex subunit 10	2	RQES(0.499)S(0.499)S(0.499)S(0.499)LEMPS(0.003)GVALEEGAHVLR	46.273	0.019465	15399000.0	356.03	153.23	404.82	455.58	333.15	343.84	511.89	414.94	348.82	509.91	True	False	340.37934749828514	178.5486530353332	319.85381419262524	415.6400087335808	376.9650644295832	410.28221370918044	626.6943629957411	400.3463250097692	332.60343433642123	417.5603578710755	0.8151620264761328	0.427599626424454	0.7660061788992484	0.9954010262198127	0.9027798193093168	0.9825698392467078	1.5008473653747494	0.9587747434908052	0.7965397769850431	1.0	8.70584094234935	-7.178920623327775	2.669998814730451	1.0372273189400654	0.6151575375539715	0.41185590971451946	0.1951159845483034	0.26871329555371826	3.7356436504273383	0.05874858721905525	0.11428724551798106	6.623375490949014e-08	7.178920623327775	-0.42206978138609386	
RQES(ph)SSSLEMPSGVALEEGAHVLR	ddPTM_K562_Methotrexat_30min_R1	1	RQESSSSLEMPSGVALEEGAHVLR	24	1	P48553	P48553	TRAPPC10	Trafficking protein particle complex subunit 10	1	RQES(0.495)S(0.208)S(0.208)S(0.089)LEMPS(0.001)GVALEEGAHVLR	56.00899999999999	0.0050501999999999995	17966000.0	282.42	223.8	400.61	448.16	243.44	402.95	136.81	237.66	374.81	454.39	True	False	270.0051549601596	260.7791460504311	316.5274356595709	408.8705086132879	275.456626999063	480.8143846385361	167.49312508829513	229.30136309302972	357.3851649092196	372.0955678708751	0.725633891597056	0.7008391622147107	0.8506616659551628	1.0988319773676383	0.7402846225103444	1.29217982194668	0.4501346953598188	0.6162431990391298	0.960466062399431	1.0	8.53952939601699	-11.943872095854427	16.42566133939249	0.999999995841022	0.8251470054542165	0.04891102691190441	0.22996028296675955	0.0	0.0	0.22365448216461192	0.05424417962397155	1.1379623779805354e-12	11.943872095854427	-0.17485299038680546	
RQGLAETAS(ph)PVAVSLR	ddPTM_K562_Methotrexat_30min_R1	3	RQGLAETASPVAVSLR	16	1	A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154-4;Q15154-2;Q15154	A0A5H1ZRS1	PCM1	Pericentriolar material 1 protein	1	RQGLAET(0.377)AS(0.623)PVAVSLR;RQGLAET(0.245)AS(0.755)PVAVSLR;RQGLAETAS(0.73)PVAVS(0.269)LR	116.61	0.00057597	133964000.0	4570.799999999999	4061.0	6627.9	5306.2	4731.1	3984.8	4266.0	4859.5	4729.299999999999	5806.7	True	False	4369.873104921385	4732.011224802505	5236.79436561262	4841.01368440697	5353.322576385417	4754.806204014492	5222.759093828429	4688.588630609179	4509.435875257257	4755.050361926564	0.9189961771826282	0.9951548069167613	1.1013120718012483	1.0180783200886179	1.1258182708745184	0.9999486529282579	1.098360416042443	0.9860229174753773	0.9483466066656352	1.0	12.215244905772519	-11.827769431324475	8.758500323732115	0.9999991735581821	1.0264944169427554	0.004071676751149944	0.06456485481079287	0.0	0.0	0.06310298053283588	0.015304720825186904	1.486724740905341e-12	11.827769431324475	0.02649524338457332	
RQHSSESVS(ph)S(ph)INSATSHSSIGSGNDADS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	RQHSSESVSSINSATSHSSIGSGNDADSK	29	1	H0YI14;H0YHA8;A0A2R8YFX5;Q8IVL0-3;Q8IVL0-2;Q8IVL0	H0YI14	NAV3	Neuron navigator 3	3	RQHS(0.26)S(0.27)ES(0.288)VS(0.323)S(0.641)INS(0.135)AT(0.033)S(0.033)HS(0.013)S(0.013)IGS(0.016)GNDADS(0.975)K	42.863	0.030532999999999998	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	151.57	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	124.1192042566706	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	6.955582542490095														
RQILIACS(ph)PVSSVR	ddPTM_K562_Methotrexat_30min_R1	2	RQILIACSPVSSVR	14	1	Q5QJE6;J3KP30;E9PRB3	Q5QJE6	DNTTIP2	Deoxynucleotidyltransferase terminal-interacting protein 2	1	RQILIACS(0.703)PVS(0.292)S(0.005)VR;RQILIACS(1)PVSSVR	217.39	1.0895e-26	100114000.0	3648.3999999999996	3514.8999999999996	4175.6	4627.2	3505.1	3103.4	3314.8999999999996	3526.2	3643.9	4274.9	True	False	3488.0207044708113	4095.6774819153743	3299.198622950264	4221.540560191461	3966.082087144329	3703.088128272075	4058.350707954018	3402.181547330812	3474.495884348618	3500.674185372045	0.9963854159995501	1.1699682018479802	0.9424466397747986	1.2059221557469233	1.1329480771781169	1.0578214172989417	1.1593054631911437	0.9718646658255728	0.9925219258813585	1.0	11.773417078213248	-9.277988786288299	24.780366674513285	0.9866449557553608	1.0962884085942393	0.29113463420680974	0.07636904844945576	925.4141658712316	1385666.593594669	0.03954049437224118	0.019080479009883956	5.272434749506046e-10	9.277988786288299	0.10964345283887844	
RQLAELETEDGMQES(ph)P	ddPTM_K562_Methotrexat_30min_R1	2	RQLAELETEDGMQESP	16	1	Q96QG7-2;Q96QG7	Q96QG7-2	MTMR9	Myotubularin-related protein 9	1	RQLAELETEDGMQES(1)P;RQLAELETEDGMQES(1)P	136.14	9.7527e-06	55281000.0	5763.0	4334.4	5672.9	5568.200000000001	4800.1	4802.4	5053.9	6153.6	5861.6	6832.8	True	False	5509.665420421357	5050.58592779709	4482.235814765433	5080.044551188213	5431.39728581253	5730.395832704073	6187.365725339776	5937.174400106313	5589.0954954026865	5595.313708814268	0.98469285318927	0.9026457122218061	0.801069617902673	0.9079105865298751	0.9707046947620611	1.0241420107825252	1.1058121219535648	1.06109768085988	0.998888674749052	1.0	12.450003304775814	-8.01520819845206	2.2535500412757212	1.046898055644386	0.8917821165262696	0.62469331420634	0.05060378826793288	0.19874045832879428	2.022662393607879	0.01918318128453539	0.020761528069215374	9.655878703555712e-09	8.01520819845206	-0.1551159391181165	
RQLQEDQENNLQDNQTSNSS(ph)PCR	ddPTM_K562_Methotrexat_30min_R1	2	RQLQEDQENNLQDNQTSNSSPCR	23	1	Q92576-2;Q92576	Q92576-2	PHF3	PHD finger protein 3	1	RQLQEDQENNLQDNQT(0.351)S(0.054)NS(0.089)S(0.506)PCR;RQLQEDQENNLQDNQT(0.002)S(0.001)NS(0.249)S(0.748)PCR	177.82	1.7231e-18	34194000.0	2303.0	2240.0	3096.0	2895.5	2628.1	2706.7	2471.84	3016.7	2713.8	3058.2	True	False	2201.762877534337	2610.121926510126	2446.1919093433307	2641.6560105537624	2973.741215150496	3229.731467678685	3026.2130423086883	2910.6009511181637	2587.636030337078	2504.330345436102	0.8791822858141839	1.0422434609183324	0.976784837432201	1.0548352837587593	1.1874396764667445	1.2896587199706124	1.2083921148117167	1.1622272422735485	1.033264654981637	1.0	11.290209164938926	-7.541331705921488	3.0738054800441916	1.1647836909254914	0.9748567491141491	0.4535396729868153	0.08754621020702791	0.22394410889022498	4.346814587944467	0.027253419230553445	0.03881717002094584	2.875201551248545e-08	7.541331705921488	-0.1899269418113423	
RQPNISVMQS(ph)PLVGVT(ph)STPGT	ddPTM_K562_Methotrexat_30min_R1	1	RQPNISVMQSPLVGVTSTPGT	21	1	C9IYQ7	C9IYQ7	NUP35		2	RQPNIS(0.023)VMQS(0.977)PLVGVT(0.36)S(0.316)T(0.278)PGT(0.047)	53.496	0.019801	27687000.0	883.68	935.14	936.77	1130.4	874.91	801.26	727.9	1053.1	886.88	1015.4	True	False	844.8344852885559	1089.655990337803	740.1547787194934	1031.2995870592206	989.9760003604583	956.0921549459574	891.1501041719902	1016.0618760972378	845.6491423779747	831.5012205728267	1.016035171549771	1.31046829923729	0.8901427447209228	1.240286317738357	1.1905887518462779	1.1498385465836107	1.071736375273233	1.221960775231654	1.0170149140555698	1.0	9.699574571042016	-9.879317909197214	7.741868390201724	1.0012386061158525	1.1373767517500153	0.16707555615174496	0.11440871351387372	0.3885018834737602	23.555035935535578	0.10215322303012166	0.026435700711188184	1.3203287825511532e-10	9.879317909197214	0.13613814563416282	
RQPPVS(ph)PLTLS(ph)PGPEAHQGFSR	ddPTM_K562_Methotrexat_30min_R1	2	RQPPVSPLTLSPGPEAHQGFSR	22	1	Q6UUV7;Q6UUV7-3	Q6UUV7	CRTC3	CREB-regulated transcription coactivator 3	2	RQPPVS(1)PLT(0.134)LS(0.866)PGPEAHQGFSR;RQPPVS(0.995)PLT(0.234)LS(0.77)PGPEAHQGFSR	85.76	0.00038272	31606000.0	2597.1	1951.8400000000001	2231.8	3069.4	2096.1	2252.3	2343.8999999999996	2525.3	2205.43	2498.9	True	False	2482.934593679735	2274.348384392643	1763.3756793515654	2800.3104675509303	2371.773890292211	2687.52509870052	2869.57924051206	2436.4837676463353	2102.900040675916	2046.3249951639127	1.2133627842828794	1.1114306817185045	0.8617280654436404	1.368458321219217	1.159040668465387	1.3133422623737472	1.402308649551634	1.190663151456629	1.027647145808074	1.0	10.998819575237356	-5.898371479939268	17.069111458546267	1.1742408716060129	3.3380955986052685	0.0024229015709796853	0.1621863864305401	1165.0405529765958	201999.74017409666	0.0404568122268519	3143.7455347086197	1.263654999853324e-06	5.898371479939268	2.1638547269992556	
RQPPVS(ph)PLTLSPGPEAHQGFSR	ddPTM_K562_Methotrexat_30min_R1	2	RQPPVSPLTLSPGPEAHQGFSR	22	1	Q6UUV7;Q6UUV7-3	Q6UUV7	CRTC3	CREB-regulated transcription coactivator 3	1	RQPPVS(0.997)PLT(0.003)LSPGPEAHQGFSR;RQPPVS(0.999)PLT(0.001)LSPGPEAHQGFSR	149.44	1.3158e-16	40645800.0	2245.7	2070.99	2326.24	2364.2	2159.2	2120.8999999999996	2083.99	2287.99	2140.38	2713.8	True	False	2146.9817169252537	2413.18589668893	1837.994013950527	2156.934256657299	2443.1726463045375	2530.733908375409	2551.3778068325146	2207.5200948549236	2040.8742009775497	2222.3045227403354	0.9661059926556776	1.085893437193395	0.8270666756705723	0.9705844696736575	1.0993869747841076	1.1387880834867528	1.1480774937569749	0.9933472538375699	0.9183593787861877	1.0	11.11784080766496	-7.690246348072624	7.746987519024605	1.0585800540488761	0.9608124262569381	0.1877774434713786	0.08779291709460005	0.4153021055666216	39.02639209187291	0.02772788792242806	0.03575860571060912	2.0405801229578345e-08	7.690246348072624	-0.09776762779193804	
RQQDPS(ph)PGSNLGGGDDLKLR	ddPTM_K562_Methotrexat_30min_R1	2	RQQDPSPGSNLGGGDDLKLR	20	2	J3KTD8;Q13951-2	J3KTD8	CBFB		1	RQQDPS(0.998)PGS(0.002)NLGGGDDLKLR;RQQDPS(0.998)PGS(0.002)NLGGGDDLKLR	109.03	0.00059995	83488000.0	5303.799999999999	4050.2	7264.200000000001	6296.299999999999	3475.5	3849.7	4082.1	4762.3	4543.2	6755.1	True	False	5070.651302590802	4719.426708371116	5739.543691166613	5744.313154636389	3932.589168317624	4593.600041054652	4997.614837533292	4594.8072097026625	4331.98762363749	5531.685931742662	0.916655675170152	0.8531624475079954	1.0375758425168706	1.0384380504456336	0.7109205433647476	0.8304159161848	0.9034523830890883	0.8306341441650046	0.7831224832883403	1.0	12.433503532694257	-7.747410474343268	24.999962522555844	0.8370069193895124	0.9591595742448161	0.3070341574652061	0.0868005337387798	298.47926857348295	531897.3095230282	0.026019877561621704	0.033423088703781724	1.7889142586785407e-08	7.747410474343268	0.12215265485530369	
RQRS(ph)NSCDRGSGQQGGGSCR	ddPTM_K562_Methotrexat_30min_R1	1	RQRSNSCDRGSGQQGGGSCR	20	3	Q5T5A8	Q5T5A8	LCE3C	Late cornified envelope protein 3C	1	RQRS(0.988)NS(0.011)CDRGS(0.001)GQQGGGSCR	46.131	0.032126	0.0	809.77	714.42	719.34	830.88	920.51	750.78	779.33	802.9	880.56	1185.6	True	False	774.1734803912202	832.4657619363227	568.3603643627362	758.0380404244214	1041.573199634026	895.8576093781367	954.1145908563776	774.6615519119474	839.6229577985176	970.8763513011066	0.7973965782086692	0.8574374695816879	0.5854096287349628	0.780777118948821	1.0728175614105502	0.922730899951951	0.9827354323521569	0.7978992905469325	0.8648093618443877	1.0	9.923143758618227	-7.578649840040612	11.325441855764982	0.9310534366305944	0.7453865961485169	0.476474517004994	0.09516476402989318	0.5662089565553348	112.97935466892356	0.029076921308460978	0.03754618356676189	2.63845784605009e-08	7.578649840040612	-0.1856668404820775	
RQS(ph)LELQK	ddPTM_K562_Methotrexat_30min_R1	2	RQSLELQK	8	1	Q9UIG0-2;Q9UIG0	Q9UIG0-2	BAZ1B	Tyrosine-protein kinase BAZ1B	1	RQS(1)LELQK;RQS(1)LELQK	125.74	0.0016123	39746000.0	4265.9	3216.6	6460.0	3867.6	3716.5	2679.5	2969.8	4095.3999999999996	4127.799999999999	4899.1	True	False	4078.376143844435	3748.0884771484234	5104.134281123361	3528.53351283638	4205.284892548543	3197.275452634218	3635.8532482071405	3951.362460705181	3935.8994789687495	4011.8255167503794	1.0165886145387406	0.9342600921947408	1.2722722510768023	0.8795331447252295	1.0482222806027885	0.7969627391033807	0.9062839929170747	0.9849287921937906	0.9810744416813195	1.0	11.97004314594794														
RQS(ph)PEPSPVTLGR	ddPTM_K562_Methotrexat_30min_R1	1	RQSPEPSPVTLGR	13	1	Q9NRL2;Q9NRL2-2	Q9NRL2	BAZ1A	Bromodomain adjacent to zinc finger domain protein 1A	1	RQS(0.994)PEPS(0.006)PVTLGR	101.43	0.0041338	108190000.0	2602.7	2662.6	3275.3	2595.7	2411.1	2387.4	2193.5	2699.7	2906.7	2934.4	True	False	2488.2884243849862	3102.549393538328	2587.8592896228074	2368.1390110842362	2728.2019115898806	2848.731261660359	2685.4482119813997	2604.7500207954713	2771.5681514410726	2402.9517250826298	1.0355132807753022	1.2911409584941376	1.0769501786532225	0.985512520441002	1.135354440587468	1.1855133134488585	1.1175622814016606	1.0839793382473808	1.1534015113623506	1.0	11.230591949907447	-12.866108419787711	2.485367444987433	0.9443874808446372	1.1197293094175707	0.16580686765153563	0.079565537937003	18515878.372994345	10557591.558080437	6075714.130954812	0.019746475068981462	1.3611048459579226e-13	12.866108419787711	0.17534182857293346	
RQS(ph)PEPSPVTLGRR	ddPTM_K562_Methotrexat_30min_R1	1	RQSPEPSPVTLGRR	14	2	Q9NRL2;Q9NRL2-2	Q9NRL2	BAZ1A	Bromodomain adjacent to zinc finger domain protein 1A	1	RQS(1)PEPSPVTLGRR	101.39	0.0021371	9741000.0	994.11	867.1	1210.6	1445.4	990.23	870.5	820.31	1084.8	1022.8	1276.1	True	False	950.4101147137035	1010.373536820057	956.5116038278537	1318.6840261282714	1120.4626016812433	1038.7118050076822	1004.2853990291601	1046.6469691295072	975.25025124503	1044.9859243381761	0.9094956138434395	0.9668776519262302	0.915334438053454	1.26191558700988	1.0722274583658808	0.9939959771855611	0.9610516042741982	1.001589537957062	0.9332663996050358	1.0	10.029267794409131	-12.198209135962145	16.651101248898968	1.0000003500168357	1.0064780899833674	0.0	0.09821174740447842	0.0	0.0	0.10058279548632017	0.024394911171176318	6.33564542658118e-13	12.198209135962145	0.00647773996653167	
RQS(ph)PSPS(ph)TRPIR	ddPTM_K562_Methotrexat_30min_R1	1	RQSPSPSTRPIR	12	2	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2	A9Z1X7	SRRM1	Serine/arginine repetitive matrix protein 1	2	RQS(0.984)PS(0.35)PS(0.504)T(0.162)RPIR	104.81	0.019976	5700100.0	3446.3	3192.1	4260.8	3733.5	3443.6	2847.0	3421.4	3839.1	3414.0	3744.5	True	False	3294.8047784831033	3719.5402685772196	3366.5163072771534	3406.1898516326964	3896.493759176689	3397.142457044082	4188.736043981384	3704.076676977403	3255.283885168687	3066.3347650531314	1.0745091553713684	1.2130248500485465	1.0978958806602517	1.1108343063036943	1.2707333209618334	1.107883749602669	1.3660400331106066	1.2079818287267865	1.0616205126292797	1.0	11.58229949552617	-6.243555543732738	22.739033303318084	1.1709191396145224	1.0745088691146283	0.04835212068173389	0.10259491086282946	2961.4293394440874	3765200.059975908	0.024861693896799517	0.6402784308440923	5.707480761517727e-07	6.243555543732738	-0.09641027049989415	
RQS(ph)SGS(ph)ATNVASTPDNR	ddPTM_K562_Methotrexat_30min_R1	3	RQSSGSATNVASTPDNR	17	1	H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-4;Q7Z460-5;Q7Z460-3;Q7Z460	H0Y5T1;Q7Z460	CLASP1	CLIP-associating protein 1	2	RQS(0.998)S(0.291)GS(0.612)AT(0.093)NVAS(0.002)T(0.004)PDNR;RQS(0.966)S(0.37)GS(0.661)AT(0.003)NVASTPDNR;RQS(0.991)S(0.042)GS(0.821)AT(0.146)NVASTPDNR	121.44	0.00064125	8027700.0	4021.37	3258.5	4010.01	4208.24	3389.5	3215.6000000000004	3236.49	3562.59	3978.8100000000004	4597.58	True	False	3844.5953898524767	3796.9117399701972	3168.3637010290217	3839.310132914099	3835.2786609157206	3836.9691903305056	3962.3552694760338	3437.2916904047656	3793.835991548925	3764.9137105389173	1.0211642777072183	1.0084990073854043	0.8415501508467497	1.0197604588298872	1.0186896581931837	1.019138680281008	1.0524425190368718	0.9129802047741341	1.007682056810239	1.0	11.878401084272655	-6.5400350009034725	24.999635845530033	0.9829930824321682	1.0179981922436865	0.04369079178712465	0.05879840534332665	728.9584705523218	1062215.2717895745	0.015416633542065739	0.04080700007646545	2.8837990810146245e-07	6.5400350009034725	0.035005109811518276	
RQS(ph)SGSATNVASTPDNR	ddPTM_K562_Methotrexat_30min_R1	3	RQSSGSATNVASTPDNR	17	1	H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-4;Q7Z460-5;Q7Z460-3;Q7Z460	H0Y5T1;Q7Z460	CLASP1	CLIP-associating protein 1	1	RQS(0.833)S(0.157)GS(0.006)AT(0.003)NVASTPDNR;RQS(0.969)S(0.03)GS(0.001)ATNVASTPDNR;RQS(0.974)S(0.026)GS(0.001)ATNVASTPDNR	203.89	2.7538999999999997e-16	38527300.0	4578.4	3955.2	5337.0	5278.8	4379.6	4221.4	4405.4	5123.3	4852.1	4738.4	True	False	4377.139018021367	4608.729573095022	4216.836634420335	4816.015799865728	4955.594165318338	5037.125805467467	5393.42309234687	4943.110635085919	4626.526930060631	3880.2298439652172	1.1280617886151705	1.1877465403918828	1.0867491885767102	1.2411676610744864	1.2771393357085783	1.2981514003098371	1.3899751584909508	1.2739221215912666	1.1923332163572997	1.0	11.921926397107391	-7.3925055172016245	5.646380495370457	1.262453478519571	1.1402120194784777	0.16693363700663766	0.09850560626260708	0.32581466227288386	13.574395054239128	0.027040537291605708	0.04038736235391221	4.0503679958669623e-08	7.3925055172016245	-0.12224145904109318	
RQS(ph)STPSAPELGQQPDVNISEWK	ddPTM_K562_Methotrexat_30min_R1	1	RQSSTPSAPELGQQPDVNISEWK	23	1	Q93100-4;Q93100-2;I3L213;Q93100-3;Q93100	Q93100-4	PHKB	Phosphorylase b kinase regulatory subunit beta	1	RQS(0.379)S(0.379)T(0.167)PS(0.075)APELGQQPDVNISEWK	56.631	0.011341	10709000.0	1174.8	921.29	1474.3	1349.3	1015.7	808.38	545.01	1276.5	1360.2	1340.8	True	False	1123.1571986658014	1073.5175132475501	1164.8645775015743	1231.0089639233965	1149.2823531175984	964.5879941781857	667.2423660870676	1231.6047714729127	1296.964598888826	1097.9681273823583	1.0229415323225237	0.9777310346948774	1.0609274973024057	1.121170035106773	1.0467356241547532	0.8785209425685596	0.6077064984370953	1.121712680685144	1.1812406631337204	1.0	10.100620460011745	-8.231279109999596	21.4367458413872	0.9435601237839648	1.047130447198702	0.07719045713814743	0.14816117860894928	325.38028494256747	231265.86039033844	0.053075655168947425	0.0530582329718	5.87111909389101e-09	8.231279109999596	0.10357032341473715	
RQT(ph)S(ph)GGPVDASSEY(ph)QQELER	ddPTM_K562_Methotrexat_30min_R1	1	RQTSGGPVDASSEYQQELER	20	1	A8MUH2;P18859;P18859-2	A8MUH2	ATP5J	ATP synthase-coupling factor 6, mitochondrial	3	RQT(1)S(1)GGPVDAS(0.156)S(0.156)EY(0.688)QQELER	70.96	0.004391300000000001	17359000.0	852.87	1066.2	686.79	1042.7	1095.1	907.93	906.44	1284.9	913.65	948.76	True	False	815.3788559977033	1242.3714276987032	542.6421645406673	951.2881098961869	1239.12484483517	1083.374622769242	1109.7322440248104	1239.7093387117475	871.1746109210222	776.9303703276294	1.0494876853042319	1.5990769252266437	0.6984437541189652	1.2244187461677312	1.5948981944323204	1.3944294934852217	1.42835482613048	1.5956505062209958	1.121303329349386	1.0	9.601641497694287	-7.5330685904284564	24.7660426590935	1.392802808755493	1.130247045345142	0.13064215338756024	0.2690799048665853	325.843704588373	791946.298921559	0.07636113901488337	0.09869384793257867	2.9304303903035033e-08	7.5330685904284564	-0.2625557634103508	
RQVS(ph)ASELHTSGILGPETLR	ddPTM_K562_Methotrexat_30min_R1	2	RQVSASELHTSGILGPETLR	20	1	A0A075B730;P58107	A0A075B730	EPPK1	Epiplakin	1	RQVS(0.575)AS(0.421)ELHT(0.003)S(0.001)GILGPETLR;RQVS(0.806)AS(0.178)ELHT(0.013)S(0.003)GILGPETLR	75.524	0.0051458	156166000.0	2002.3600000000001	1818.56	2863.91	2109.81	1788.43	1937.8400000000001	1961.75	1999.76	1911.8600000000001	2192.67	True	False	1914.3386519581675	2119.046129765292	2262.814428645821	1924.8462329913436	2023.6398924742612	2312.3001541827553	2401.7223751331267	1929.4273073252418	1822.9780458988316	1795.556215593284	1.0661535602914196	1.18016139587427	1.2602303447782317	1.0720055525275436	1.1270267535486849	1.2877904540675882	1.3375924152503098	1.0745568924934632	1.015272053343363	1.0	10.81021510652462	-9.506735887505947	20.293554566621708	1.0200614020583927	1.1904374177578334	0.44683436457527215	0.08368258495964492	58.012631427987564	72935.39514677814	0.05126436278435218	0.02331915579096253	3.1136092764500894e-10	9.506735887505947	0.17037601569944072	
RRAS(ph)QEANLLTLAQK	ddPTM_K562_Methotrexat_30min_R1	1	RRASQEANLLTLAQK	15	2	A0A0A0MSU2;A0A1C7CYX1;Q6PJG2;H7C1L3	A0A0A0MSU2	ELMSAN1	ELM2 and SANT domain-containing protein 1	1	RRAS(1)QEANLLTLAQK	105.2	0.0054101999999999996	26891000.0	4357.4	3616.3	5721.2	4491.3	3168.5	2914.1	3368.7	4203.1	4106.9	4897.0	True	False	4165.853913403438	4213.832108410073	4520.39830482399	4097.554702193102	3585.2132872433885	3477.208582392748	4124.216727468311	4055.2745906602436	3915.9711154069373	4010.105847099795	1.0388388916008997	1.0508032129520015	1.1272516180821637	1.021807118920951	0.8940445524240466	0.8671114217365482	1.0284558275315958	1.0112637285105868	0.9765256241899605	1.0	11.969424601908521	-7.5264860213491716	24.64600309221489	0.9615857183156185	1.070878599128265	0.47690558771577185	0.051704020238387015	81.70910309859715	558254.7690473433	0.01665459069761605	0.021614163520315137	2.975185019718202e-08	7.5264860213491716	0.10929288081264654	
RRDEDMLYS(ph)PELAQR	ddPTM_K562_Methotrexat_30min_R1	1	RRDEDMLYSPELAQR	15	2	Q9Y2W2	Q9Y2W2	WBP11	WW domain-binding protein 11	1	RRDEDMLY(0.006)S(0.994)PELAQR	92.236	0.0056325	6681400.0	2485.5	1684.4	2480.3	2620.1	1916.5	1739.7	1979.0	2439.0	2514.5	2609.0	True	False	2376.2403960536676	1962.7184700953815	1959.7189253049955	2390.399900967678	2168.5533422761414	2075.872403413975	2422.8411267431907	2353.2189875616414	2397.601443836164	2136.484818273098	1.1122196496459835	0.9186671739057007	0.9172632113009908	1.1188471270766238	1.0150099470535738	0.9716298405957711	1.13403152038382	1.101444282418879	1.1222178708361354	1.0	11.061023350017207	-8.760742637377453	24.999987646791713	1.0978771122277942	1.0059408299391812	0.22534329509455264	0.07230159406531547	25.964757026475795	931704.6971620619	0.02894718988178745	0.02106860463224551	1.734831753349292e-09	8.760742637377453	-0.09193628228861295	
RRDS(ph)DGVDGFEAEGK	ddPTM_K562_Methotrexat_30min_R1	3	RRDSDGVDGFEAEGK	15	2	Q96KR1	Q96KR1	ZFR	Zinc finger RNA-binding protein	1	RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK	196.45	1.4214e-07	163474000.0	10193.900000000001	7958.599999999999	15149.0	10874.4	8394.5	7093.0	7225.0	9439.7	9445.5	12611.699999999999	True	False	9745.788361831215	9273.623376930122	11969.431923334025	9921.058235595176	9498.523888200923	8463.621864353232	8845.390167114481	9107.700400527112	9006.380766655197	10327.598920128334	0.9436644894135869	0.8979457324641036	1.1589752870830201	0.9606355080520395	0.9197223828753114	0.8195149646892039	0.8564807982497219	0.8818797545261311	0.8720691843582246	1.0	13.334217258276054	-7.802010197079971	3.2210669552077005	0.8769235293874408	0.9981351556477657	0.28882782088770986	0.07676427608881722	0.2875556361607279	6.120510796826885	0.02478442825798522	0.03002480008833214	1.5775742283826995e-08	7.802010197079971	0.12121162626032489	
RRDSGDNS(ph)APSGQEREDHGLETGDPPLPPPPVLPGPGEELPGAR	ddPTM_K562_Methotrexat_30min_R1	1	RRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEELPGAR	44	3	Q8IXQ3	Q8IXQ3	C9orf40	Uncharacterized protein C9orf40	1	RRDS(0.116)GDNS(0.399)APS(0.399)GQEREDHGLET(0.085)GDPPLPPPPVLPGPGEELPGAR	46.975	0.00045646	88483000.0	207.22	192.26	204.36	193.05	201.93	201.5	163.88	253.55	147.32	261.95	True	False	198.1108569182221	224.0276971387663	161.46762874463923	176.1256062294609	228.4873344147255	240.43702321544865	200.63426167290265	244.63250278649198	140.47112535531664	214.50831665260176	0.9235579301061063	1.0443776755825336	0.7527336527755125	0.8210665627230574	1.065167719276651	1.1208750642747276	0.935321598732378	1.1404336512633988	0.6548516511964008	1.0	7.744889772981452	-7.760935078728533	24.99999905514521	0.9973289659605624	0.8873084890896166	0.10086787312331613	0.14490362580310678	31.09850781541533	1541604.0440072338	0.04348098966762881	0.05276645253459488	1.7340631978551982e-08	7.760935078728533	-0.11002047687094585	
RREEEGLQLR	ddPTM_K562_Methotrexat_30min_R1	2	RREEEGLQLR	10	2	C9J352;C9JWD9;F2Z3G4;C9J4U1;C9JYI4;P52294	C9J352	KPNA1	Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed	0	;	116.52	0.0087586	9071900.0	3582.1000000000004	3192.6000000000004	3584.3	3850.5	2969.9	3066.3	3370.2	3427.6	3654.7	4123.6	False	True	3424.635173085435	3720.122885078671	2832.0044123576563	3512.9326432869148	3360.4939061966693	3658.819078340101	4126.053140651794	3307.0493652178247	3484.793794705919	3376.7760814990233	1.0141730130844702	1.1016788781053046	0.8386710708696056	1.040321465949098	0.9951781892226842	1.0835243409790656	1.221891248062901	0.9793510986223743	1.0319884145705462	1.0	11.721430800157464	-8.256706424680814	23.386918927091028	1.071969230839321	0.997263284547215	0.11913697233526543	0.08727238244331087	342.9018600257917	1694376.9164335628	0.029837267790045714	0.028853099496534154	5.53724290469951e-09	8.256706424680814	-0.07470594629210592	
RREEGPPPPS(ph)PDGAS(ph)SDAEPEPPSGR	ddPTM_K562_Methotrexat_30min_R1	3	RREEGPPPPSPDGASSDAEPEPPSGR	26	2	C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53	C9JWF0	SMC4	Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein	2	RREEGPPPPS(0.998)PDGAS(0.536)S(0.46)DAEPEPPS(0.007)GR;RREEGPPPPS(0.997)PDGAS(0.517)S(0.453)DAEPEPPS(0.033)GR;RREEGPPPPS(0.994)PDGAS(0.504)S(0.438)DAEPEPPS(0.065)GR	65.73100000000001	0.0029706	240813000.0	5993.3	5612.4	7000.699999999999	6109.0	5766.0	5688.3	4990.6	6365.9	6670.2	6676.1	True	False	5729.84170817479	6539.753705511345	5531.34874022605	5573.43345483438	6524.330066039252	6787.48346975899	6109.869088996753	6142.007688773533	6360.103857894603	5466.993597268317	1.0480790961668238	1.1962248700600366	1.011771578256446	1.019469541288515	1.1934036413174607	1.241538580390963	1.1175921427911788	1.123470803375826	1.1633640582773948	1.0	12.41653197057188	-7.766524742191332	24.999445799580375	1.1500354571215223	1.0739022649030965	0.16609628630453133	0.07559958742045947	219.0156898336651	1076671.3566626266	0.023320341378756188	0.027250495687625664	1.7118876459720054e-08	7.766524742191332	-0.07613319221842585	
RREEGPPPPS(ph)PDGASSDAEPEPPSGR	ddPTM_K562_Methotrexat_30min_R1	2	RREEGPPPPSPDGASSDAEPEPPSGR	26	2	C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53	C9JWF0	SMC4	Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein	1	RREEGPPPPS(0.922)PDGAS(0.039)S(0.039)DAEPEPPSGR;RREEGPPPPS(0.999)PDGAS(0.001)S(0.001)DAEPEPPSGR	77.301	0.0017419	164909000.0	1523.85	1786.1399999999999	2276.56	1751.55	1671.56	1667.61	1162.8400000000001	1927.54	1790.94	1827.1999999999998	True	False	1456.8633786064709	2081.2692758110693	1798.741167033157	1597.9943309568098	1891.3994389851841	1989.8520311876634	1423.6364708550045	1859.7473256599278	1707.6795903058025	1496.2763740699904	0.9736592810348845	1.3909658081079312	1.2021450035600296	1.0679807277917104	1.2640709108040165	1.3298693113593099	0.9514528836558452	1.2429169890594929	1.141286208817679	1.0	10.547160961675235	-11.30747476066992	0.42331336496168787	0.9632479661076548	1.1958553920933372	0.1278132493757057	0.13667928201180285	13.29518801218777	2.544769335307882	0.8871146220045887	0.08384576640994781	4.926349723464948e-12	11.30747476066992	0.2326074259856824	
RREEGPPPPSPDGAS(ph)SDAEPEPPSGR	ddPTM_K562_Methotrexat_30min_R1	2	RREEGPPPPSPDGASSDAEPEPPSGR	26	2	C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53	C9JWF0	SMC4	Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein	1	RREEGPPPPS(0.033)PDGAS(0.47)S(0.47)DAEPEPPS(0.028)GR;RREEGPPPPS(0.006)PDGAS(0.497)S(0.497)DAEPEPPSGR	80.593	0.0022072	527210000.0	2577.68	2679.1099999999997	2774.43	2419.75	2328.07	2161.58	2065.67	2261.2200000000003	2582.0	2550.9	True	False	2464.368273626884	3121.787390416311	2192.1150578292704	2207.6142744042363	2634.252011245927	2579.274742640443	2528.9490804848956	2181.6916109283034	2461.963383569289	2088.9072912736106	1.179740376186994	1.4944595212327263	1.0494075380878842	1.056827310444328	1.2610669809284925	1.234748307603376	1.2106564475357788	1.0444176340626978	1.1785891091740244	1.0	11.028532749595694	-4.179294047168565	0.0238015830798692	3.829311817172775e-06	2.6573191720815306	0.22716221593750063	0.12168408600392377	2723.922034023442	6.134680322494835	255.8416767476328	454.2589431104424	6.617682894358723e-05	4.179294047168565	2.6573153427697136	
RREEGPPPPSPDGASS(ph)DAEPEPPSGR	ddPTM_K562_Methotrexat_30min_R1	1	RREEGPPPPSPDGASSDAEPEPPSGR	26	2	C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53	C9JWF0	SMC4	Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein	1	RREEGPPPPS(0.03)PDGAS(0.481)S(0.484)DAEPEPPS(0.006)GR	90.041	0.00023339	15899000.0	1059.1	1257.2	1421.0	1286.8	1120.7	942.55	1107.4	1068.2	1342.7	1467.8	True	False	1012.5432321305333	1464.9309312538066	1122.751519113977	1173.9882418858856	1268.091693550155	1124.6844478001042	1355.7626395934362	1030.6308005384765	1280.2781700691269	1201.9671967271966	0.8424050464002341	1.218777796301452	0.9340949754461573	0.976722364039972	1.0550135619366376	0.935703113082018	1.127953111603216	0.8574533509273404	1.0651523382294967	1.0	10.231181808194734	-9.26091953532838	24.99998593749636	0.9709771458770209	1.0150892923943184	0.024591529864122497	0.11071326081828348	195.29155832408256	9392535.13541026	0.05140440625673973	0.027490684222614883	5.48378557307933e-10	9.26091953532838	0.04411214651729756	
RREPES(ph)PPASAPIPLFGADTIGQR	ddPTM_K562_Methotrexat_30min_R1	1	RREPESPPASAPIPLFGADTIGQR	24	2	Q96AY4	Q96AY4	TTC28	Tetratricopeptide repeat protein 28	1	RREPES(0.946)PPAS(0.054)APIPLFGADTIGQR	63.703	0.0033673	11737000.0	1784.7	1356.6	1954.0	1891.3	1873.8	1352.5	1542.9	1903.8	1594.9	1953.3	True	False	1706.2467249394401	1580.7550917426936	1543.882102989944	1725.4926654326819	2120.2375438335685	1613.8514833692022	1888.9346005316163	1836.8422749158876	1520.7534471164438	1599.538442136008	1.066711921384606	0.9882570184632566	0.9652047505205683	1.0787441051610338	1.3255308456370851	1.0089482321000556	1.1809247910348135	1.1483576927747898	0.950745169391268	1.0	10.643439950208846	-7.512371554261286	24.98335652817635	1.117546616317219	1.0077272274664038	0.13673272963215477	0.10359707431607708	838.3436667847033	1993364.6553261317	0.029345945508490116	0.04045745155168671	3.0734662307585915e-08	7.512371554261286	-0.10981938885081521	
RRFS(ph)DS(ph)EGEETVPEPR	ddPTM_K562_Methotrexat_30min_R1	1	RRFSDSEGEETVPEPR	16	2	A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286	A0A1B0GWH8	CLN3	Battenin	2	RRFS(1)DS(0.998)EGEET(0.002)VPEPR	119.96	5.2828e-05	0.0	1777.5	1347.8	2298.6	2355.1	1730.6	1711.7	1633.7	1912.2	1744.2	2121.0	True	False	1699.3632283184047	1570.501041317119	1816.1552722275778	2148.632039528637	1958.2042338341205	2042.4617996917295	2000.0988119051801	1844.9468421547226	1663.112522703932	1736.866347089783	0.9784075966269846	0.9042152517656765	1.0456505621579046	1.2370739079197375	1.1274351864294	1.1759464411950804	1.1515559704731788	1.0622272952930631	0.9575362695526748	1.0	10.76227102673031	-6.954281604510245	5.567701977209068	1.112816461442505	0.945529602229125	0.38267329177931964	0.07966417567567344	0.18131609762676137	13.154597734362575	0.021796840658558737	0.046013939561636324	1.1110110936934923e-07	6.954281604510245	-0.16728685921337993	
RRFS(ph)DSEGEETVPEPR	ddPTM_K562_Methotrexat_30min_R1	3	RRFSDSEGEETVPEPR	16	2	A0A1B0GWH8;H3BQ48;A0A1B0GWD3;A0A1B0GV71;A0A1B0GW34;A0A0D9SFH9;H3BPL0;Q9UBD8;A0A1B0GV41;H3BR84;O95090;H3BR00;Q9UP10;Q9UBH5;A0A0D9SF04;Q13286-5;Q13286-4;Q13286-6;Q13286-2;Q13286-7;Q13286-3;Q13286	A0A1B0GWH8	CLN3	Battenin	1	RRFS(0.992)DS(0.008)EGEETVPEPR;RRFS(0.865)DS(0.132)EGEET(0.003)VPEPR;RRFS(0.955)DS(0.045)EGEETVPEPR	105.19	0.0037646999999999997	132181000.0	3384.8	2870.13	3889.09	3544.6899999999996	3188.42	3045.98	2801.16	3450.3599999999997	3456.84	4457.700000000001	True	False	3236.0082448450844	3344.3701986314754	3072.823156559448	3233.932531186263	3607.7531163997364	3634.5725259245264	3429.3914353653167	3329.0088831173325	3296.13226291931	3650.367334003831	0.8864883856211081	0.9161736046337209	0.841784641215569	0.8859197541742163	0.9883260467495599	0.9956730907785162	0.9394647501416957	0.9119654485473321	0.9029590617402372	1.0	11.83382593338912	-7.705084594600694	9.889078704074446	0.9530820771215128	0.8819010009396787	0.5106418606253466	0.03530622299930741	0.38135680746577616	64.06534190967243	0.011270865093695773	0.01453622579471844	1.9720385726702098e-08	7.705084594600694	-0.07118107618183411	
RRFS(ph)SSDFSDLSNGEELQETCSSSLR	ddPTM_K562_Methotrexat_30min_R1	1	RRFSSSDFSDLSNGEELQETCSSSLR	26	2	P23497-2;P23497-3;P23497;P23497-4;E9PHV6;P23497-7;P23497-6;H7C1G8;H7C4B4	P23497-2	SP100	Nuclear autoantigen Sp-100	1	RRFS(0.768)S(0.077)S(0.077)DFS(0.077)DLSNGEELQETCSSSLR	71.071	0.0023034	13450000.0	294.53	302.17	359.7	366.02	446.92	378.52	165.62	338.19	378.99	299.09	True	False	281.58281386026414	352.09845648819834	284.2038855913425	333.93159488271056	505.6978135820784	451.66363289087644	202.76450096574396	326.2956660120834	361.3708376215822	244.92190275864365	1.149684085778754	1.4375948109270202	1.1603857490500102	1.3634207113431616	2.0647308708866854	1.8441128694642095	0.8278741046918806	1.3322437166170022	1.4754533324759127	1.0	7.936177986087088	-10.747669723913146	0.6412098725505929	0.9903322481040133	1.4352891177262834	0.11576471982078507	0.3321499038030813	6.723599425154543	3.8800135300997827	0.598221324883707	0.14374756301871328	1.7878466953660913e-11	10.747669723913146	0.4449568696222701	
RRGDS(ph)ES(ph)EEDEQDSEEVR	ddPTM_K562_Methotrexat_30min_R1	2	RRGDSESEEDEQDSEEVR	18	2	Q9NZ63	Q9NZ63	C9orf78	Uncharacterized protein C9orf78	2	RRGDS(1)ES(1)EEDEQDSEEVR;RRGDS(1)ES(1)EEDEQDSEEVR	92.289	0.0054109	189948000.0	7551.9	6964.1	9482.2	8596.7	7143.8	7020.1	5914.4	7874.0	8832.2	9879.3	True	False	7219.92751838974	8114.7991555398	7492.015801930018	7843.040658237802	8083.334916019986	8376.634971090676	7240.854754931745	7597.06695697431	8421.592949791122	8090.063037625693	0.8924439135777953	1.0030575927281484	0.9260763194409926	0.9694659512244804	0.9991683474437201	1.0354227071077418	0.895030696455095	0.939061527906701	1.0409798923226596	1.0	12.98193522881495	-6.248258166937312	23.740216203309107	0.9746567071261494	0.8924438043687698	0.24541463647091177	0.044872377629613214	1670.6988010802504	3008929.6047906424	0.011236694004935117	0.19579714753681793	5.646012470666334e-07	6.248258166937312	-0.08221290275737958	
RRGDSES(ph)EEDEQDSEEVR	ddPTM_K562_Methotrexat_30min_R1	2	RRGDSESEEDEQDSEEVR	18	2	Q9NZ63	Q9NZ63	C9orf78	Uncharacterized protein C9orf78	1	RRGDS(0.042)ES(0.958)EEDEQDSEEVR;RRGDS(0.042)ES(0.957)EEDEQDSEEVR	128.29	4.4298e-06	10482900.0	1997.3899999999999	1451.95	2267.1099999999997	2081.39	1783.26	1637.8200000000002	1534.54	1700.16	2011.19	2105.62	True	False	1909.5871272072561	1691.8600585698107	1791.274592891266	1898.917770266448	2017.789946854868	1954.30553529889	1878.6996577223335	1640.3644091401375	1917.6902158794426	1724.2718141250298	1.1074745359543345	0.9812026414340791	1.0388585942293769	1.101286789420751	1.1702272984603546	1.1334091987640529	1.0895611946633061	0.9513374838598342	1.1121739624634308	1.0	10.751771503392897														
RRGEEGHDPKEPEQLR	ddPTM_K562_Methotrexat_30min_R1	3	RRGEEGHDPKEPEQLR	16	3	P51991	P51991	HNRNPA3	Heterogeneous nuclear ribonucleoprotein A3	0	;;	71.529	0.012309	36802000.0	6139.96	4683.0	7832.5	6512.610000000001	5716.950000000001	4974.5	4418.91	5955.6	6378.57	7475.08	False	True	5870.0547101805205	5456.786152610227	6188.565287445617	5941.6595927793305	6468.829131294335	5935.751722011161	5409.963053752783	5746.138172333786	6082.031672940962	6121.2705769938175	0.9589601760527517	0.8914466504909964	1.0109935853358158	0.9706578916982469	1.0567788255606247	0.9696927537103309	0.8837974054088684	0.9387165785368272	0.9935897452074197	1.0	12.579615425304446	-6.335264865966081	0.0029172614249643116	1.9177538462400237	2.0757863832761255e-06	0.027677537426789134	0.0496037721357074	517959.9479608094	241.0779982123781	77604.19562116827	80899.2665625944	4.6209911208853665e-07	6.335264865966081	-1.9177517704536404	
RRGS(ph)S(ph)GSVDETLFALPAASEPVIR	ddPTM_K562_Methotrexat_30min_R1	3	RRGSSGSVDETLFALPAASEPVIR	24	2	Q9NQC3-5;Q9NQC3	Q9NQC3-5	RTN4	Reticulon-4	2	RRGS(0.661)S(0.661)GS(0.661)VDET(0.018)LFALPAASEPVIR;RRGS(0.625)S(0.625)GS(0.625)VDET(0.124)LFALPAASEPVIR;RRGS(0.671)S(0.671)GS(0.655)VDET(0.004)LFALPAASEPVIR	72.227	0.0022747	669616000.0	2284.52	1662.96	2269.57	2094.24	1830.9199999999998	1651.27	1483.1	2318.6499999999996	2264.42	2623.16	True	False	2184.0952362070107	1937.7358745130703	1793.218272509156	1910.6412307173598	2071.7180722359694	1970.3545574440386	1815.7229282833885	2237.101765276669	2159.147608451575	2148.080305059892	1.0167661009052054	0.9020779483656423	0.8348003881815573	0.8894645261710027	0.9644509413153465	0.9172629872369236	0.8452770243302254	1.0414423334207215	1.0051521832613117	1.0	11.068832213528257	-9.274527719854419	24.93112272396547	1.0174729527514084	0.9083983276787702	0.4751405598552155	0.050788862568239244	690.9501362112163	1316137.9772375114	0.028372533574447106	0.013761747753515588	5.314620766221292e-10	9.274527719854419	-0.10907462507263821	
RRGS(ph)SGSVDETLFALPAASEPVIR	ddPTM_K562_Methotrexat_30min_R1	4	RRGSSGSVDETLFALPAASEPVIR	24	2	Q9NQC3-5;Q9NQC3	Q9NQC3-5	RTN4	Reticulon-4	1	RRGS(0.333)S(0.333)GS(0.333)VDETLFALPAASEPVIR;RRGS(0.472)S(0.472)GS(0.055)VDET(0.001)LFALPAASEPVIR;RRGS(0.43)S(0.43)GS(0.141)VDETLFALPAASEPVIR;RRGS(0.434)S(0.434)GS(0.131)VDETLFALPAASEPVIR	102.9	3.2777999999999998e-06	506012000.0	3433.79	3357.0299999999997	3807.6000000000004	3922.87	3597.62	3492.09	3410.0199999999995	4516.77	4729.84	5191.85	True	False	3282.844703104053	3911.7221477465546	3008.436793932709	3578.95807774859	4070.7700888283275	4166.886969729209	4174.8037892960165	4357.912638970393	4509.9507707751245	4251.555654944877	0.7721514122215147	0.920068432644632	0.7076084704274476	0.8417996536364271	0.9574777844184441	0.9800852459458713	0.9819473454241174	1.0250160159380286	1.0607766043306326	1.0	12.053775108270115	-7.831180447428121	2.4499526415213655	1.0083920881238817	0.8062026442578687	0.7595128336985681	0.05348747953970135	0.14300007054197747	1.754133646060988	0.017973899671807948	0.021809425678256878	1.475093511129126e-08	7.831180447428121	-0.202189443866013	
RRGSTCVLAGMAT(ph)DFGNMPEQK	ddPTM_K562_Methotrexat_30min_R1	1	RRGSTCVLAGMATDFGNMPEQK	22	2	H0YB94;P49675	H0YB94	STAR	Steroidogenic acute regulatory protein, mitochondrial	1	RRGSTCVLAGMAT(0.999)DFGNMPEQK	47.397	0.026269999999999998	0.0	688.94	585.53	512.36	476.51	552.64	617.73	853.75	596.95	641.3	606.83	True	False	658.6550225134635	682.278880191729	404.8226378136789	434.73510812950224	625.3218466347439	737.0975799051068	1045.2251702662966	575.9549301455189	611.4861029755946	496.9272066970735	1.3254557481192193	1.3729956238995902	0.8146517887487262	0.8748466621883243	1.2583771590834625	1.4833109758758714	2.1033768249752227	1.1590327967223188	1.23053456267762	1.0	8.95689072118264	-8.029485243381192	5.11862330752362	1.444246666129643	1.0922836212560603	0.1534876588513947	0.31918256961947894	0.3310645633137575	23.33026550803902	0.11064193132162702	0.11552040421806864	9.343611157861106e-09	8.029485243381192	-0.35196304487358265	
RRKEDEVEEWQHR	ddPTM_K562_Methotrexat_30min_R1	2	RRKEDEVEEWQHR	13	3	E7EQR4;P15311	E7EQR4	EZR	Ezrin	0	;	52.79	0.028919999999999998	44555000.0	6877.0	4647.1	8127.5	7721.2	5809.200000000001	5766.0	5076.1	5566.5	6688.6	6747.6	False	True	6574.695314287299	5414.954287805894	6421.64881885915	7044.29438393636	6573.211623245797	6880.1978950882185	6214.544640455338	5370.7230398777665	6377.648445910749	5525.544254419152	1.189872890625945	0.979985688011672	1.1621748959341558	1.2748598254918617	1.1896043757117238	1.2451620289866756	1.1246936689512794	0.9719808208182272	1.1542118119513949	1.0	12.431900858574354	-9.009425388322049	23.636201279559874	1.0475252086288642	1.1708941571985532	0.3212025481538091	0.08538415661082144	290.11172735962	727515.7929782944	0.03942378851718216	0.024913669565861885	9.785310517224149e-10	9.009425388322049	0.12336894856968894	
RRPDLDEIHR	ddPTM_K562_Methotrexat_30min_R1	1	RRPDLDEIHR	10	2	O00488;A9J4F5	O00488	ZNF593	Zinc finger protein 593	0		119.53	0.010221	8308900.0	2551.3	2314.5	2759.2	3372.3	2411.6	2118.8	2422.3	2746.4	3055.7	3437.4	False	True	2439.147906840364	2696.9317852266427	2180.0816266990037	3076.6556948335206	2728.767670353845	2528.228113096243	2965.5624362354893	2649.807555325661	2913.6411739630817	2814.853550912975	0.8665274632313451	0.958107317644257	0.7744920249907536	1.0930073764710182	0.9694172790867899	0.8981739431084194	1.0535405777233535	0.9413660453014392	1.035095119963902	1.0	11.458844149465747	-7.261777858509807	24.99999954791815	0.9930957842279563	0.8755487781637966	0.44742122901228476	0.06693585199234009	30.415053874012145	2246519.4297885476	0.017960569132932036	0.028578259658324796	5.472958329566776e-08	7.261777858509807	-0.11754700606415969	
RRPGAQPLPPPPPSQS(ph)PEPTEPHPR	ddPTM_K562_Methotrexat_30min_R1	4	RRPGAQPLPPPPPSQSPEPTEPHPR	25	2	K7EPZ6;A0A0A0MS90;Q9UIS9-4;Q9UIS9-11;Q9UIS9-7;Q9UIS9-10;Q9UIS9-6;Q9UIS9-5;Q9UIS9;Q9UIS9-9;Q9UIS9-12	K7EPZ6;Q9UIS9-6	MBD1	Methyl-CpG-binding domain protein 1	1	RRPGAQPLPPPPPS(0.019)QS(0.98)PEPT(0.001)EPHPR;RRPGAQPLPPPPPSQS(1)PEPTEPHPR;RRPGAQPLPPPPPS(0.002)QS(0.984)PEPT(0.014)EPHPR;RRPGAQPLPPPPPS(0.004)QS(0.978)PEPT(0.018)EPHPR	128.55	2.0255e-12	177614000.0	7004.3	6635.400000000001	8749.900000000001	8204.3	6920.5	6624.0	7012.700000000001	8153.2	7585.2	9180.5	True	False	6696.399358712011	7731.787067484504	6913.4155644584	7485.041756997491	7830.667052033416	7903.994252005611	8585.476487878714	7866.447334722247	7232.565707610288	7517.822489136138	0.890736562134694	1.0284609777176255	0.9196034589069967	0.9956395974783898	1.041613720375729	1.0513675021493953	1.1420163884270242	1.0463731148334376	0.9620559301662058	1.0	12.876099135522344	-7.612262773964054	3.001768882859074	1.0490508072036298	0.9542076710969211	0.3684277815826764	0.05434016180014916	0.27788520493404884	5.038459070935739	0.01704948833136596	0.023224287033260606	2.4419525792153498e-08	7.612262773964054	-0.09484313610670869	
RRPGASPTGET(ph)PTIEEGEEDEDEASEAEGAR	ddPTM_K562_Methotrexat_30min_R1	1	RRPGASPTGETPTIEEGEEDEDEASEAEGAR	31	2	P04920-2;P04920-3;P04920;C9J9M9;C9J722;C9J035	P04920-2	SLC4A2	Anion exchange protein 2	1	RRPGAS(0.127)PT(0.1)GET(0.422)PT(0.351)IEEGEEDEDEASEAEGAR	52.669	0.0039346	27903000.0	237.32	196.22	309.8	330.97	222.48	303.53	179.02	174.87	226.22	284.58	True	False	226.88769695894442	228.64201983027527	244.77721366749498	301.95437396407516	251.7400196136687	362.1828767076185	219.16979207153426	168.7197229827405	215.70308157670195	233.0398043634184	0.9736006154773459	0.9811286121477989	1.0503665429008533	1.2957201658699757	1.0802447260086432	1.5541674423258847	0.940482217920788	0.7239952996168298	0.9256061734428838	1.0	7.864432585225714	-8.982719901282726	24.996860646551205	0.8613280418591973	1.1544914352940685	0.3487402889052793	0.17350477267348663	254.3754229569164	367971.0617317948	0.07469370596544744	0.05034670977528995	1.0405910798462413e-09	8.982719901282726	0.2931633934348712	
RRPGASPTGETPT(ph)IEEGEEDEDEASEAEGAR	ddPTM_K562_Methotrexat_30min_R1	1	RRPGASPTGETPTIEEGEEDEDEASEAEGAR	31	2	P04920-2;P04920-3;P04920;C9J9M9;C9J722;C9J035	P04920-2	SLC4A2	Anion exchange protein 2	1	RRPGAS(0.2)PT(0.058)GET(0.2)PT(0.542)IEEGEEDEDEASEAEGAR	65.165	0.00010685	36237000.0	217.86	74.863	207.39	0.0	57.907	185.17	134.84	191.02	159.94	262.38	True	False	208.2831352581984	87.23283829657473	163.86167315203923	0.0	65.52278548979106	220.95148183029585	165.08130244065285	184.30171832883332	152.50442430986527	214.86043948581678	0.9693880165033705	0.40599767228128136	0.762642362382657	0.0	0.30495509385810554	1.0283488312648692	0.7683187413918982	0.8577740917308294	0.7097836375780674	1.0	7.747256065227395	-8.261097405792814	24.9999783995288	0.857423047710447	0.4720883022573401	0.35494308377279626	0.2581043386300934	37.50527160080486	2741884.058103255	0.08974939628462172	0.08451761098543689	5.481540083415983e-09	8.261097405792814	-0.38533474545310686	
RRPGASPTGETPTIEEGEEDEDEAS(ph)EAEGAR	ddPTM_K562_Methotrexat_30min_R1	2	RRPGASPTGETPTIEEGEEDEDEASEAEGAR	31	2	P04920-2;P04920-3;P04920;C9J9M9;C9J722;C9J035	P04920-2	SLC4A2	Anion exchange protein 2	1	RRPGASPTGETPTIEEGEEDEDEAS(1)EAEGAR;RRPGASPTGETPTIEEGEEDEDEAS(1)EAEGAR	93.542	2.3751e-07	31144000.0	858.95	558.1	990.79	893.8399999999999	660.8	531.713	799.0899999999999	821.12	886.87	1382.01	True	False	821.1915864776902	650.316538922009	782.8367189464724	815.4784349761271	747.7067824555565	634.4590120345202	978.3062738601403	792.2407441847537	845.6396072757926	1131.7145970492925	0.7256172082774	0.5746294521759925	0.6917262717893312	0.7205689818813996	0.660684932760472	0.5606175034666324	0.864446103647393	0.7000358096028403	0.747219846311623	1.0	10.144294460732885	-11.556626770488835	0.32074274251063106	1.1199197975605728	0.6487335863150322	0.6130013791175303	0.0764646271660323	6.1199374363518455	0.6521427914699724	0.84066731043386	0.07724106340839008	2.7757045001478983e-12	11.556626770488835	-0.4711862112455406	
RRPS(ph)HCELDLAEGHQPQK	ddPTM_K562_Methotrexat_30min_R1	1	RRPSHCELDLAEGHQPQK	18	2	P12980	P12980	LYL1	Protein lyl-1	1	RRPS(1)HCELDLAEGHQPQK	67.846	0.011937	27233000.0	3552.8	2841.3	4560.6	4334.1	2998.3	3326.2	2461.5	3177.0	3436.4	3746.7	True	False	3396.623166002605	3310.776531157684	3603.3923842865615	3954.136182124352	3392.6290039898563	3968.9410750333755	3013.554034097205	3065.2631092592583	3276.642514057902	3068.136323734695	1.1070639657458436	1.0790839069131175	1.1744564139511002	1.2887746061137115	1.105762145490384	1.2935999760930355	0.9822099529231317	0.9990635310259163	1.0679585808199692	1.0	11.583146870894923	-8.783867632685235	24.99643340805245	1.0122299152830443	1.1724682123494043	0.5588944181940261	0.07069790251429497	190.54227241844208	212358.4990089742	0.03025640145325021	0.020415502595119848	1.6448729827336501e-09	8.783867632685235	0.16023829706636006	
RRPS(ph)PYEMEITDGPHTK	ddPTM_K562_Methotrexat_30min_R1	1	RRPSPYEMEITDGPHTK	17	2	P17542-2;P17542	P17542-2	TAL1	T-cell acute lymphocytic leukemia protein 1	1	RRPS(0.874)PY(0.126)EMEITDGPHTK	61.265	0.033682	15557000.0	1453.8	1180.7	2106.1	1671.0	1189.5	1104.4	1232.5	1600.8	1358.3	1877.0	True	False	1389.8926927309683	1375.7906065314755	1664.0583915594286	1524.5060243948674	1345.9400994716786	1317.8096696731584	1508.9194990959995	1544.498956657923	1295.1529294741151	1537.0571114981242	0.9042557250044411	0.8950809935686339	1.0826262596953993	0.9918343391345923	0.8756604353886568	0.8573589490040017	0.9816938406571635	1.00484161915919	0.8426186117520174	1.0	10.58595505603063	-5.31341409881911	24.169499041608532	0.9443613543511626	0.9506803668249637	0.0	0.07496395142133681	0.0	0.0	0.01763894968453779	0.0	4.859436385467799e-06	5.31341409881911	0.006319012473801067	
RRRSMDPIDPQQAVS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	RRRSMDPIDPQQAVSK	16	3	Q9UKP5-4;Q9UKP5-3;Q9UKP5-2;Q9UKP5	Q9UKP5-4	ADAMTS6	A disintegrin and metalloproteinase with thrombospondin motifs 6	1	RRRSMDPIDPQQAVS(1)K	69.26100000000001	0.023517	5098300.0	774.83	579.93	595.58	810.94	592.21	592.57	854.64	696.93	916.49	711.48	True	False	740.7694009552457	675.7535753754538	470.5758970822677	739.8461492655737	670.0959952148992	707.075765988975	1046.31477542183	672.4185768763156	873.882579940905	582.6240776178402	1.2714362990009103	1.1598449177356174	0.8076835736111337	1.269851655102486	1.1501344021941269	1.2136054673194716	1.7958660062589071	1.15412081770739	1.4999081114428463	1.0	9.18642151353599	-8.53601161196879	24.962114360487806	1.393805499668346	1.1288985631678896	0.17781846057947137	0.23026385322549156	342.09184820686374	650220.1502218137	0.08446561127550378	0.06546304160007953	2.910639293673498e-09	8.53601161196879	-0.2649069365004564	
RRS(ph)IQDLTVTGTEPGQVSSR	ddPTM_K562_Methotrexat_30min_R1	5	RRSIQDLTVTGTEPGQVSSR	20	2	Q9UG54;O43318-4;O43318-2;O43318-3;O43318	Q9UG54	DKFZp586F0420;MAP3K7	Mitogen-activated protein kinase kinase kinase 7	1	RRS(0.999)IQDLTVTGTEPGQVSSR;RRS(1)IQDLTVTGTEPGQVSSR;RRS(0.799)IQDLT(0.2)VT(0.001)GTEPGQVSSR;RRS(0.979)IQDLT(0.01)VT(0.006)GT(0.006)EPGQVSSR;RRS(0.957)IQDLT(0.001)VT(0.006)GT(0.032)EPGQVS(0.002)S(0.002)R	130.77	3.1332999999999997e-06	379096000.0	10917.599999999999	10511.099999999999	15031.0	12193.199999999999	11944.8	11233.5	10577.899999999998	13882.599999999999	13275.8	14411.8	True	False	10437.675376365121	12247.880616848464	11876.198510768614	11124.241087164277	13515.750567607642	13404.214889780358	12950.26334238343	13394.341089267406	12658.610955689062	11801.6833668027	0.884422590570898	1.0378079326633085	1.0063139419733562	0.9425978262097745	1.1452392127064257	1.1357883848574912	1.0973234020844522	1.1349517414562011	1.0726106236078863	1.0	13.52670503674046	-7.7598418733265495	24.999999269539938	1.106290186408828	0.9755391853596369	0.5706798463735552	0.05471091744258746	30.147301699967635	471780.1767200505	0.015869837605689326	0.01941521875674403	1.7384336774447084e-08	7.7598418733265495	-0.13075100104919102	
RRS(ph)PGLCSDSLEK	ddPTM_K562_Methotrexat_30min_R1	2	RRSPGLCSDSLEK	13	2	Q5VUA4;Q5VUA4-2	Q5VUA4	ZNF318	Zinc finger protein 318	1	RRS(1)PGLCSDSLEK;RRS(1)PGLCSDSLEK	96.756	0.025473	159133000.0	3417.7999999999997	2630.1099999999997	4720.3	4092.1000000000004	2997.3	3064.7	2600.8	3184.3999999999996	3329.3	4404.4	True	False	3267.5576043581655	3064.690973273904	3729.5735367161888	3733.351946395114	3391.497486461925	3656.9099009845436	3184.095605070082	3072.402847064899	3174.521569681347	3606.7204804913877	0.9059636370581693	0.8497167966995778	1.0340622615168846	1.035109864096392	0.9403272321230337	1.0139155281826326	0.8828229474096295	0.8518549922799418	0.8801684485538073	1.0	11.816471903785683	-8.784575786091802	24.925324492384398	0.891366141683574	0.9634773753865072	0.1548326074898837	0.06557705649309656	385.42768111489295	415224.8926637215	0.028736135027638835	0.0193873241511728	1.64219306553353e-09	8.784575786091802	0.07211123370293326	
RRS(ph)PPPGPDGHAKK	ddPTM_K562_Methotrexat_30min_R1	1	RRSPPPGPDGHAKK	14	3	P57081-3;P57081-2;P57081	P57081-3	WDR4	tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4	1	RRS(1)PPPGPDGHAKK	72.48899999999999	0.020495	11300000.0	4466.7	2801.6	7519.1	4994.4	3136.9	2801.8	2643.4	3690.4	3900.4	5483.1	True	False	4270.349216275566	3264.5167809423065	5940.943664581212	4556.548706306242	3549.45733336083	3343.208196749599	3236.2497394810284	3560.606540261367	3719.071255334492	4490.0574576746785	0.9510678329909622	0.7270545670551267	1.3231331047727666	1.0148085518411156	0.7905149024972681	0.7445802705787617	0.7207590927259593	0.7929979902986236	0.8282903482621653	1.0	12.132518191403996	-7.762062819788311	24.960509306817066	0.7944882350439064	1.007027159851705	0.26891600198700216	0.15258508802651818	20.986501331412498	840249.7672445187	0.0471878379583374	0.0567744768501152	1.729566162992942e-08	7.762062819788311	0.21253892480779868	
RRS(ph)QS(ph)IEQESQEK	ddPTM_K562_Methotrexat_30min_R1	2	RRSQSIEQESQEK	13	2	A0A0A0MRN0;Q5VTL8	A0A0A0MRN0	PRPF38B	Pre-mRNA-splicing factor 38B	2	RRS(1)QS(1)IEQESQEK;RRS(1)QS(1)IEQESQEK	139.29	2.2744e-05	122094000.0	15839.5	12034.6	23266.7	16660.8	12354.5	10815.6	9840.3	14914.900000000001	15028.2	18843.8	True	False	15143.214545681785	14023.113096776227	18383.33762826825	15200.173531560746	13979.3332988002	12905.561629225844	12047.237766291571	14390.334513154206	14329.542262182795	15431.005219844616	0.9813498427313909	0.908762125149319	1.191324697669525	0.9850410465815269	0.9059249931963257	0.8363396580690028	0.7807163301842809	0.9325597592727087	0.9286201422415881	1.0	13.91354442580339	-7.725772956667988	3.8977925613461255	0.8837712365780807	1.0250128816830821	0.3148537518310175	0.08629305776612206	0.25150390005976353	8.111369941031455	0.027386100809372562	0.034574200933224435	1.8802995552956248e-08	7.725772956667988	0.14124164510500148	
RRS(ph)SPSARPPDVPGQQPQAAK	ddPTM_K562_Methotrexat_30min_R1	2	RRSSPSARPPDVPGQQPQAAK	21	3	A0A0A6YYC7;Q96JP5-2;Q96JP5	A0A0A6YYC7	ZFP91-CNTF;ZFP91	E3 ubiquitin-protein ligase ZFP91	1	RRS(0.333)S(0.333)PS(0.333)ARPPDVPGQQPQAAK;RRS(0.333)S(0.333)PS(0.333)ARPPDVPGQQPQAAK	62.781000000000006	0.009376899999999999	16421300.0	5524.5	4480.0	7530.8	5529.8	3915.1	4511.2	3733.7	5613.7	5655.299999999999	7175.5	True	False	5281.649594849522	5220.243853020252	5950.187994471178	5045.011019568367	4430.004273595263	5382.925553992717	4571.077268782746	5416.262989124548	5392.386337373892	5875.947417983372	0.8988592339483845	0.8884088780378913	1.01263465637228	0.8585868219528447	0.753921701211486	0.9160949156076926	0.7779302542417137	0.9217684577210549	0.9177050020683407	1.0	12.520605770387109	-10.038338342844119	1.8307107970461163	0.9981810302260374	0.8753104304246127	0.2299142648617174	0.06883612602846673	0.6155783760123171	4.661231574636421	0.06830751904957968	0.019379982781345336	9.155069744379553e-11	10.038338342844119	-0.12287059980142478	
RRTSDPS(ph)AAVNHVSSTTSLGENYEDDDLVNSDEVMK	ddPTM_K562_Methotrexat_30min_R1	1	RRTSDPSAAVNHVSSTTSLGENYEDDDLVNSDEVMK	36	2	H7C3A2;Q8NHH9-2;Q8NHH9	H7C3A2	ATL2	Atlastin-2	1	RRT(0.124)S(0.124)DPS(0.141)AAVNHVS(0.114)S(0.114)T(0.114)T(0.114)S(0.114)LGENY(0.041)EDDDLVNS(0.002)DEVMK	42.865	0.011225	12082000.0	1197.1	1100.7	1764.7	1305.6	1277.6	1054.5	1062.2	1155.5	1645.4	1698.6	True	False	1144.4769173670675	1282.5719662989711	1394.3135860523826	1191.1400750747691	1445.6267936822333	1258.2672008967281	1300.4253889977851	1114.860410056366	1568.9057131390036	1390.9670802294702	0.8227922383168559	0.9220721212808164	1.0024058842732355	0.8563395151510449	1.0392961948774126	0.9045988354297714	0.9349073802546439	0.8015002122641505	1.1279244026969917	1.0	10.441872560939297	-6.3016664299592895	3.715034632380381	0.9484591782721296	0.8141822203767801	0.1682480093826172	0.08850452160252985	0.41992928629307213	10.672072202281687	0.020844002279904652	0.14372708079393698	4.992678145589338e-07	6.3016664299592895	-0.13427695789534944	
RRVNDAEPGS(ph)PEAPQGK	ddPTM_K562_Methotrexat_30min_R1	1	RRVNDAEPGSPEAPQGK	17	2	Q8N8A6	Q8N8A6	DDX51	ATP-dependent RNA helicase DDX51	1	RRVNDAEPGS(1)PEAPQGK	138.82	4.0832e-06	22949000.0	3269.9	2466.1	4352.7	3842.1	3253.1	2771.8	2386.7	3757.1	3618.5	5103.5	True	False	3126.1591112677065	2873.5811084672396	3439.127753164962	3505.269058245076	3680.93967010619	3307.411121332907	2921.978230014136	3624.9606634554493	3450.276724804599	4179.206696073884	0.7480269196076248	0.6875900900443135	0.822914012938345	0.8387402952665796	0.8807747349668572	0.7913968754979319	0.6991705465918114	0.8673800860007437	0.8255817373297015	1.0	12.029013398198321	-15.999999999970639	0.1660542949296918	1.779813672282664	0.745500286367922	0.5396512931740949	0.059425828357326974	115.00984943919777	1.0737348167789857	29.511709208192215	0.2507879363107997	1.0000000000676071e-16	15.999999999970639	-1.034313385914742	
RRVS(ph)EVEEEKEPVPQPLPSDDTR	ddPTM_K562_Methotrexat_30min_R1	1	RRVSEVEEEKEPVPQPLPSDDTR	23	3	O43290	O43290	SART1	U4/U6.U5 tri-snRNP-associated protein 1	1	RRVS(1)EVEEEKEPVPQPLPSDDTR	54.559	0.012740000000000001	26344000.0	2766.8	2314.1	4028.7	3036.4	1950.2	1950.0	1967.0	2379.6	2813.1	3351.8	True	False	2645.1747848727778	2696.4656920254806	3183.130925442983	2770.203526315128	2206.685482967354	2326.8099020849854	2408.14982127532	2295.9081192298795	2682.3195950111403	2744.7565403939348	0.9637192756240359	0.9824061450777987	1.159713394830323	1.009271126800026	0.8039640130161214	0.8477290673478222	0.8773637245544903	0.8364705887176298	0.977252282865921	1.0	11.422462472674619	-7.633952267514032	6.657762164646169	0.880013269922017	1.0385504142832969	0.4483656634478078	0.07491816505299108	0.18160036517989742	9.959908472777794	0.02220084146054928	0.02870901563441951	2.3229920979995148e-08	7.633952267514032	0.15853714436127986	
RS(ph)AAGSPPAVAAAGSGNGAGGGGGVGCAPAAGAGR	ddPTM_K562_Methotrexat_30min_R1	2	RSAAGSPPAVAAAGSGNGAGGGGGVGCAPAAGAGR	35	1	Q86VQ1	Q86VQ1	GLCCI1	Glucocorticoid-induced transcript 1 protein	1	RS(0.916)AAGS(0.084)PPAVAAAGSGNGAGGGGGVGCAPAAGAGR;RS(0.719)AAGS(0.28)PPAVAAAGS(0.001)GNGAGGGGGVGCAPAAGAGR	104.58	2.155e-18	14857000.0	2438.8	2058.13	2503.41	2265.88	1816.36	2008.2600000000002	1924.5099999999998	2179.31	2271.28	2798.22	True	False	2331.593272136667	2398.201000271554	1977.9784521218319	2067.23381840565	2055.243177029319	2396.3278225442023	2356.1303571644958	2102.6624320553324	2165.688688548898	2291.4352426938094	1.0175252735467435	1.046593399450482	0.8632050407833136	0.9021567705205631	0.896923962212075	1.0457759302536873	1.0282334465601701	0.9176180905655636	0.9451232346426321	1.0	11.162035799540966	-8.24884838926368	24.64926849060851	0.984756482262148	0.9439538148561049	0.10254564297245539	0.06192830877030403	1869.6658793863764	3660228.7990635443	0.022779827329045575	0.022626452729302426	5.6383445417611186e-09	8.24884838926368	-0.0408026674060431	
RS(ph)ASPDDDLGSSNWEAADLGNEER	ddPTM_K562_Methotrexat_30min_R1	5	RSASPDDDLGSSNWEAADLGNEER	24	1	E9PQA1;E9PM92;O00193	E9PQA1	C11orf58;SMAP	Small acidic protein	1	RS(0.578)AS(0.422)PDDDLGSSNWEAADLGNEER;RS(0.57)AS(0.428)PDDDLGS(0.001)S(0.001)NWEAADLGNEER;RS(0.5)AS(0.5)PDDDLGSSNWEAADLGNEER;RS(0.5)AS(0.5)PDDDLGSSNWEAADLGNEER;RS(0.702)AS(0.298)PDDDLGSSNWEAADLGNEER	130.25	2.9846e-12	950778000.0	5366.0	4974.099999999999	5993.2300000000005	6009.9	4970.7	5227.84	4716.15	5797.8099999999995	6339.48	6477.62	True	False	5130.117065066982	5795.985479756255	4735.3329253338925	5483.021397971702	5624.434176077232	6238.0460915466565	5773.8666901919705	5593.897736070011	6044.758958508843	5304.460248578841	0.9671327193829817	1.0926626288337447	0.8927077786288572	1.0336624540528323	1.0603216750628148	1.176000158209865	1.088492781473646	1.0545649272362283	1.1395615529644776	1.0	12.372990242905779	-7.739373166937001	3.0922516072747936	1.0958912055693741	0.9920820728189103	0.33438806803094434	0.06408380161123152	0.2765675829759677	5.446777196302957	0.019667530954185147	0.024836321207450954	1.8223291955486153e-08	7.739373166937001	-0.10380913275046388	
RS(ph)ASPHDVDLCLVSPCEFEHR	ddPTM_K562_Methotrexat_30min_R1	1	RSASPHDVDLCLVSPCEFEHR	21	1	Q66K74-2;Q66K74	Q66K74-2	MAP1S	Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain	1	RS(0.621)AS(0.379)PHDVDLCLVSPCEFEHR	93.215	0.00076588	49044000.0	1346.2	1266.1	1254.6	1185.3	1319.8	1112.0	1304.2	1696.8	1682.9	1702.2	True	False	1287.0226598943661	1475.301504979673	991.2766051234314	1081.38658929697	1493.3768333608411	1326.8782621120533	1596.7000492665334	1637.1225822446036	1604.6623463240724	1393.9150853447568	0.9233149661882359	1.058386927934557	0.7111456182269948	0.7757908646418809	1.0713542374724243	0.9519075272679732	1.145478706740319	1.174477986110391	1.15119088902549	1.0	10.444926962307909	-8.334651724471106	1.5026437996498716	1.128315622988733	0.8810424095092851	0.4494665723113448	0.11122993603153955	0.3681374276035377	1.662535661722222	0.053821094044933925	0.04603556416177506	4.6275196919822625e-09	8.334651724471106	-0.24727321347944786	
RS(ph)DSLLSFR	ddPTM_K562_Methotrexat_30min_R1	2	RSDSLLSFR	9	1	Q00587-2;Q00587	Q00587-2	CDC42EP1	Cdc42 effector protein 1	1	RS(0.713)DS(0.287)LLSFR;RS(0.775)DS(0.225)LLSFR	136.81	0.00010485	64513000.0	4254.1	2827.59	3176.9	3722.2	3556.2	3404.3999999999996	3538.3999999999996	4842.1	4983.4	5712.9	True	False	4067.0948577155154	3294.80118668784	2510.112104907244	3395.8805050883147	4023.9026328215036	4062.2521182862215	4331.976272293132	4671.800598471595	4751.722821719283	4678.238450867148	0.8693645910591941	0.7042824390614641	0.5365506977187054	0.7258887166084623	0.860132008037265	0.8683294280421409	0.9259844956150465	0.998623872540238	1.0157077010126567	1.0	12.191749682717584	-8.295140812372175	1.125070974236411	0.9981709842235359	0.6968831544592355	0.6946115711485896	0.08075069187354746	0.2902314142387087	0.7612682120747903	0.04666375122893113	0.04078994131420468	5.06826352071809e-09	8.295140812372175	-0.30128782976430035	
RS(ph)EQRRLLS(ph)AIGT(ph)SAIMDSDLLK	ddPTM_K562_Methotrexat_30min_R1	1	RSEQRRLLSAIGTSAIMDSDLLK	23	3	O15047	O15047	SETD1A	Histone-lysine N-methyltransferase SETD1A	3	RS(0.999)EQRRLLS(0.998)AIGT(0.499)S(0.499)AIMDS(0.005)DLLK	43.604	0.034062	0.0	254.22	388.84	572.18	368.98	326.5	300.16	366.17	321.04	245.81	536.12	True	False	243.04479319443305	453.08920085008793	452.08723730234703	336.6320962784071	369.440472868855	358.1616719024768	448.2929435975517	309.7488412327959	234.3823467525821	439.0234728909829	0.5536031857111778	1.032038669519153	1.0297564144471338	0.7667747103854711	0.8415050576591686	0.8158144017766781	1.021113838505101	0.7055405014977681	0.5338720164759466	1.0	8.778154266934232	-9.311954821725719	24.583939595335014	0.7147794761827851	0.871835014034657	0.08069980948172473	0.17418942601917364	611.0550621276182	297373.4710065621	0.09171916138543561	0.04406056095071459	4.875792087803095e-10	9.311954821725719	0.15705553785187187	
RS(ph)FLQMSPVR	ddPTM_K562_Methotrexat_30min_R1	2	RSFLQMSPVR	10	1	F8WF25	F8WF25	PRSS16		1	RS(1)FLQMSPVR;RS(0.999)FLQMS(0.001)PVR	92.866	0.010048	12993700.0	0.0	144.17	166.24	56.02	137.65	127.73	56.441	199.49099999999999	124.49	0.0	True	False	0.0	167.9916420290021	131.34849580401664	51.108813576660985	155.75338771944214	152.41201476580278	69.09933099267937	192.47478845742484	118.70248707224664	0.0											0.0														
RS(ph)IHMS(ph)INFTCMK	ddPTM_K562_Methotrexat_30min_R1	1	RSIHMSINFTCMK	13	1	B4DXG3;O60383	B4DXG3	GDF9	Growth/differentiation factor 9	2	RS(1)IHMS(1)INFTCMK	89.029	0.012254000000000001	176160000.0	0.0	0.0	0.0	0.0	0.0	0.0	52.909	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	64.77519008330246	0.0	0.0	0.0											0.0														
RS(ph)LLLPPPPFHGS(ph)IS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	RSLLLPPPPFHGSISR	16	1	A0A2R8YGQ0;A0A2R8Y7I3;A0A2R8YFQ2;A0A2R8Y466;A0A2R8YFJ9;A0A2R8Y5U9;A0A2R8Y7S4;Q6P4D5-2;Q6P4D5	A0A2R8YGQ0	FAM122C	Protein FAM122C	3	RS(1)LLLPPPPFHGS(1)IS(1)R	83.891	0.0078335	68763000.0	123.53	66.32300000000001	54.794	64.304	62.032	66.525	102.82	58.144	171.05	58.236999999999995	True	False	118.09976911064555	77.2817484517549	43.29348820431476	58.66656815840071	70.19029529249862	79.38001473651475	125.88000235054825	56.099042563667055	163.09792283482844	47.689714971931934	2.476420108196366	1.6205118545422117	0.9078160402047989	1.2301723378495608	1.4718120109086317	1.6645101524140862	2.639562899980335	1.1763341969371064	3.4199810783272806	1.0	5.575606255061253	-8.539610034179606	24.46763328191185	2.084860340563722	1.500750886570282	0.09783607902791047	0.7405726896900006	407.4973549192117	595912.3917979058	0.2702116965532186	0.20936364315038264	2.886622323061128e-09	8.539610034179606	-0.5841094539934399	
RS(ph)LLSEIQALHAQMNGR	ddPTM_K562_Methotrexat_30min_R1	1	RSLLSEIQALHAQMNGR	17	1	H7BYL6;A0A0A0MRF6;Q99996-5;Q99996-3;Q99996;Q99996-1;Q99996-6;H0Y6Q0;A0A0A0MRE9	H7BYL6	AKAP9	A-kinase anchor protein 9	1	RS(0.989)LLS(0.011)EIQALHAQMNGR	70.134	0.011755	49907000.0	1482.1	2068.8	1775.3	1285.9	2109.1	2775.3	1886.8	2171.8	1669.1	2468.4	True	False	1416.9486586164312	2410.634036412564	1402.6887909099537	1173.1671434885466	2386.483618155288	3311.5874467981844	2309.9629297317088	2095.4165630120424	1591.5039053119672	2021.3488407149553	0.7009916497714732	1.192586844910905	0.6939370200018616	0.5803882634496651	1.180639170283534	1.6383057590528853	1.1427829196046488	1.0366427213379406	0.7873474747431765	1.0	10.981102605558483	-7.786319775182459	24.8712207611468	1.1587444208559383	0.8135882089841582	0.2981806314730593	0.25174872902365497	287.4779747616464	287370.2048686424	0.08363868871138495	0.09487757806511178	1.6356117613542424e-08	7.786319775182459	-0.34515621187178014	
RS(ph)MGGAAIAPPTSLVEK	ddPTM_K562_Methotrexat_30min_R1	1	RSMGGAAIAPPTSLVEK	17	1	H0Y6J6;Q5W012;Q96I25;Q5W011;Q5W010	H0Y6J6	RBM17	Splicing factor 45	1	RS(1)MGGAAIAPPTSLVEK	68.08800000000001	0.026660000000000003	31444000.0	2393.7	1955.0	3497.6	2605.0	1854.4	2086.6	1605.4	2138.9	2264.3	2694.7	True	False	2288.4758141354523	2278.0305206818275	2763.501557532052	2376.6236945234177	2098.286103791745	2489.8059188156567	1965.451816510117	2063.6736746599386	2159.0331872253837	2206.663717823119	1.0370750176619759	1.0323414946655813	1.2523437691078074	1.077021240403574	0.9508862119968652	1.1283123471445202	0.8906893246285128	0.9352008001906876	0.9784151385582562	1.0	11.107651073049796	-8.267031958319922	1.1625993485322375	0.9542210615579719	1.0993422698867703	0.3093402038428279	0.08291939708263851	0.5728431986282754	1.5990904956925076	0.0442383178987508	0.039663929621422685	5.40714532055898e-09	8.267031958319922	0.14512120832879838	
RS(ph)NSAPLIHGLSDTSPVFQAEAPSAR	ddPTM_K562_Methotrexat_30min_R1	2	RSNSAPLIHGLSDTSPVFQAEAPSAR	26	1	Q96E09	Q96E09	FAM122A	Protein FAM122A	1	RS(0.651)NS(0.349)APLIHGLSDTSPVFQAEAPSAR;RS(0.588)NS(0.412)APLIHGLSDTSPVFQAEAPSAR	91.555	3.7028e-05	91846000.0	3454.7	2622.8199999999997	3679.0	4268.799999999999	3371.2	3522.3	3079.2	4172.8	4260.0	4678.9	True	False	3302.83552454098	3056.1964246827156	2906.828176509728	3894.560931739565	3814.5718901546193	4202.934624673822	3769.7889830559043	4026.0402588344455	4061.953529823847	3831.505870532004	0.8620202176755067	0.7976488952262425	0.7586646803456719	1.016456991934298	0.995580332916198	1.096940672073209	0.9838922633654923	1.0507723059485827	1.0601454537925177	1.0	11.903695800825126	-7.271953555828203	22.87517844347381	1.0307729432534831	0.8052650405884119	0.8694328965058655	0.039597823103010105	67.9511451837628	147838.0855637447	0.010995225698115651	0.016545544719624834	5.346215296525654e-08	7.271953555828203	-0.22550790266507126	
RS(ph)PVGVLGTSAPGSSR	ddPTM_K562_Methotrexat_30min_R1	3	RSPVGVLGTSAPGSSR	16	1	Q13356-2	Q13356-2			1	RS(1)PVGVLGTSAPGSSR;RS(0.992)PVGVLGTSAPGSS(0.007)R;RS(0.998)PVGVLGT(0.001)S(0.001)APGSSR	95.073	0.0037014	50678000.0	2623.82	2055.01	3204.71	2688.08	2341.03	2073.34	1906.67	2244.58	2471.67	2728.51	True	False	2508.480014473358	2394.565473302488	2532.0851659533805	2452.4201999134384	2648.9164784078866	2473.9836114814802	2334.2892830355945	2165.6368491599446	2356.7626011877237	2234.3503991975226	1.122688731084565	1.0717054380380568	1.133253390722776	1.0975987476244713	1.185542106269123	1.107249611506782	1.044728384533583	0.9692467439027215	1.054786483818369	1.0	11.12563973706515	-8.844520633588374	3.3287400515273	1.0087682527516317	1.1208360456624593	0.6997169257399063	0.03353316825053878	0.13480874951965677	2.9642414862358866	0.015002270716982107	0.009833183436525665	1.4304720166317822e-09	8.844520633588374	0.11206779291082758	
RS(ph)PVPAQIAITVPK	ddPTM_K562_Methotrexat_30min_R1	1	RSPVPAQIAITVPK	14	1	A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3	A0A0A0MSA7	EIF4G3	Eukaryotic translation initiation factor 4 gamma 3	1	RS(1)PVPAQIAITVPK	95.01799999999999	0.006353899999999999	9418300.0	1462.9	965.93	1756.4	1419.7	892.0	905.93	665.84	1231.9	1379.9	1735.5	True	False	1398.592667627	1125.5335144972876	1387.7556426261722	1295.2371052264477	1009.3136349127673	1080.9881510747957	815.17156939398	1188.5733787524325	1315.7487501887147	1421.184132661158	0.9841037733851873	0.7919688157436247	0.9764784243879847	0.9113788111334489	0.7101920234803313	0.7606249790100404	0.5735861741346469	0.8363260969757921	0.9258115960843045	1.0	10.4728777710284	-6.255249874273363	23.811004888183486	0.8196152257467585	0.9841039191469254	0.11263693855683765	0.12404439376625244	799.3288399816057	3074843.7395488387	0.03242936380102354	0.283587459491567	5.555845059829932e-07	6.255249874273363	0.16448869340016692	
RS(ph)QGRSCGPASQS(ph)T(ph)LGLK	ddPTM_K562_Methotrexat_30min_R1	1	RSQGRSCGPASQSTLGLK	18	2	Q9BXS6-7;Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6;H0YMD2	Q9BXS6-7	NUSAP1	Nucleolar and spindle-associated protein 1	3	RS(0.93)QGRS(0.078)CGPAS(0.386)QS(0.829)T(0.777)LGLK	46.248999999999995	0.031089999999999996	47506000.0	139.97	146.09	167.03	101.26	0.0	200.4	0.0	0.0	0.0	0.0	True	False	133.81708639534577	170.22888939458215	131.97268560000535	92.38269301629225	0.0	239.12446378350327	0.0	0.0	0.0	0.0											0.0														
RS(ph)SAIGIENIQEVQEK	ddPTM_K562_Methotrexat_30min_R1	1	RSSAIGIENIQEVQEK	16	1	F2Z357;J3KPC5;P47736;P47736-3;P47736-4;A0A0A0MQY8;X6R8W7;P47736-2	F2Z357	RAP1GAP	Rap1 GTPase-activating protein 1	1	RS(0.5)S(0.5)AIGIENIQEVQEK	97.76700000000001	0.0020206	18184000.0	1467.2	797.3	1608.9	1328.0	1195.8	1018.2	986.13	1302.1	1279.6	1688.8	True	False	1402.7036447756755	929.0402732171971	1271.2138769194069	1211.576301853013	1353.0686598976313	1214.9527396425299	1207.2947550860351	1256.3044049626947	1220.111675296384	1382.9419551934102	1.0142896016047915	0.6717854424246367	0.9192098570338205	0.8760861562577795	0.9783987352588482	0.8785276454156123	0.8729901862852877	0.9084288753008403	0.8822580519120532	1.0	10.433524889659548	-15.999999978993896	0.1720551608079686	1.4437552421567608	0.8597045822201036	0.12366331346171133	0.08569911849902509	264.4356440724926	2.504255035088374	40.13728125287032	0.29002419109433974	1.000000048368342e-16	15.999999978993896	-0.5840506599366572	
RS(ph)SDPALIGLSTSVSDSNFSSEEPSR	ddPTM_K562_Methotrexat_30min_R1	4	RSSDPALIGLSTSVSDSNFSSEEPSR	26	1	Q5VWU8;Q5VWV2;Q8TEW0-9;Q8TEW0-10;Q8TEW0-8;Q8TEW0-5;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0	Q5VWU8	PARD3	Partitioning defective 3 homolog	1	RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR	169.33	5.6192e-28	120913000.0	3397.6499999999996	3033.7	3375.5600000000004	3217.4500000000003	2809.18	2788.21	2623.8199999999997	4053.3799999999997	3416.8999999999996	3997.5199999999995	True	False	3248.29337423124	3534.9673609168567	2667.076085756776	2935.3811539133867	3178.636409107902	3326.9921215858353	3212.2784260592816	3910.820327922344	3258.049064801668	3273.5303912392023	0.9922905811183231	1.0798639201204077	0.814739980082222	0.896701970988023	0.9710117302147979	1.01633152100549	0.9812887134502106	1.1946797067742798	0.9952707552436457	1.0	11.67663165753584	-8.657601119407062	1.7211997590779984	1.0666479039933248	0.9484997259707918	0.21230835166792572	0.0844193438576512	0.5233577495609999	3.1687317545371836	0.04443482878747435	0.029892113458182254	2.1998794387866626e-09	8.657601119407062	-0.11814817802253297	
RS(ph)SDPLGDTASNLGSAVDELMR	ddPTM_K562_Methotrexat_30min_R1	1	RSSDPLGDTASNLGSAVDELMR	22	1	Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7	Q7Z6Z7-2	HUWE1	E3 ubiquitin-protein ligase HUWE1	1	RS(0.5)S(0.5)DPLGDT(0.001)ASNLGSAVDELMR	68.565	0.0026253	16137000.0	2050.3	1921.0	1811.4	2302.6	1855.2	1724.2	1430.8	2430.6	2204.4	2435.4	True	False	1960.1712669599012	2238.4125985830124	1431.2118942456434	2100.73463301713	2099.1913178140867	2057.377247782017	1751.6933219525818	2345.114420322805	2101.917925151099	1994.3254604914923	0.9828743130405736	1.122390824831252	0.7176420913229117	1.0533559715470981	1.0525821183152075	1.0316155956184734	0.8783387449312736	1.1758935373290889	1.0539493010499354	1.0	10.961685151731242	-9.265572859279525	24.971362423482006	1.0861910547971056	0.9805379079663196	0.13676592403661625	0.11371162345850579	690.1055460160661	4169053.8284616335	0.05877863863666637	0.029826640122974302	5.425342256071047e-10	9.265572859279525	-0.10565314683078608	
RS(ph)SDSWEVWGSASTNR	ddPTM_K562_Methotrexat_30min_R1	1	RSSDSWEVWGSASTNR	16	1	F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;E5RHH7;Q8N6T3-4	F8VWH9	ARFGAP1	ADP-ribosylation factor GTPase-activating protein 1	1	RS(0.499)S(0.499)DS(0.001)WEVWGSASTNR	70.167	0.028845	17130000.0	1589.8	1409.8	2303.8	1773.8	1372.0	1425.8	1533.6	1669.4	1229.1	1715.5	True	False	1519.91429557277	1642.7454874973089	1820.2638632897829	1618.2937080021643	1552.4420483187414	1701.3156709706534	1877.548838794016	1610.686255775072	1171.9594092738234	1404.8063264651216	1.0819386750608475	1.1693750637007079	1.295740081033139	1.1519692626059248	1.1050932922726164	1.21106777419748	1.3365179266514584	1.146553959383142	0.8342498088137139	1.0	10.45615553175741	-9.662855674580545	5.8747484173771785	0.9204915890396367	1.1948342914464076	0.6335788191083028	0.08259807091239241	0.12450574725532977	6.025323383412807	0.05971035455873717	0.021504132487341038	2.17342333429483e-10	9.662855674580545	0.27434270240677094	
RS(ph)SEEVDGQHPAQEEVPESPQTSGPEAENR	ddPTM_K562_Methotrexat_30min_R1	1	RSSEEVDGQHPAQEEVPESPQTSGPEAENR	30	1	Q6JBY9;B7ZKW8	Q6JBY9	RCSD1	CapZ-interacting protein	1	RS(0.581)S(0.419)EEVDGQHPAQEEVPESPQTSGPEAENR	101.37	5.1253e-09	23375000.0	1341.6	1257.9	1735.1	1348.5	1169.2	1125.4	827.75	1115.8	1109.8	1243.4	True	False	1282.624870386481	1465.7465943558418	1370.9262215444483	1230.279098681316	1322.9702936547162	1342.8676224648432	1013.3940084192409	1076.5566815585398	1058.2056402343908	1018.2082112076547	1.259688201556745	1.4395352327962276	1.346410494881444	1.2082785084026506	1.2993121437172421	1.3188536565346722	0.9952718876793344	1.0573050479348232	1.0392821709611797	1.0	9.991816889849838	-8.75806835960287	24.999879636613546	1.0277401688533656	1.3140805391540904	0.8549176687902246	0.05831690735148699	33.12667690663569	245673.8092095749	0.02432596195820492	0.018060496170747554	1.7455473755011635e-09	8.75806835960287	0.2863403703007248	
RS(ph)SITEPEGPNGPNIQK	ddPTM_K562_Methotrexat_30min_R1	2	RSSITEPEGPNGPNIQK	17	1	Q13625-2;Q13625;Q13625-3	Q13625-2	TP53BP2	Apoptosis-stimulating of p53 protein 2	1	RS(0.351)S(0.351)IT(0.298)EPEGPNGPNIQK;RS(0.333)S(0.333)IT(0.333)EPEGPNGPNIQK	137.39	1.0882e-06	94285000.0	7453.5	6040.7	10277.1	8391.9	5866.8	5361.6	5215.8	6396.6	6782.3	8417.1	True	False	7125.853064568904	7038.823000656115	8120.0771548812545	7656.195156265286	6638.387032854509	6397.653318471213	6385.575921610476	6171.627952372606	6466.992353362502	6892.681626633387	1.0338288420336348	1.02120239725828	1.178072279373125	1.1107716228588993	0.9631065806381828	0.9281805928407633	0.9264283870208875	0.8953885130172525	0.9382403981019496	1.0	12.750849663348898	-7.851854998028178	4.707712629788766	0.9321705524206879	1.0877203169773086	0.6913067877372217	0.04722989393701428	0.12228751753635393	4.720003675781539	0.01575128346833848	0.018176681604249758	1.4065170527824009e-08	7.851854998028178	0.15554976455662073	
RS(ph)SLPLDHGSPAQENPESEK	ddPTM_K562_Methotrexat_30min_R1	1	RSSLPLDHGSPAQENPESEK	20	1	Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;A0A0A0MRX3;X6R5W5	Q5VZ89-5	DENND4C	DENN domain-containing protein 4C	1	RS(0.5)S(0.5)LPLDHGSPAQENPESEK	103.71	0.00015816	9895100.0	1920.3	1227.5	2845.2	1729.1	1620.8	1473.3	1154.4	1682.3	1663.8	2555.3	True	False	1835.8859113022975	1430.3235110674905	2248.031401958541	1577.5124876009365	1833.9636092675032	1757.9943737137487	1413.303586009268	1623.1325554632838	1586.4503011551444	2092.510408636738	0.8773604679454712	0.6835442754138272	1.0743226856506414	0.7538851329435822	0.8764418096549986	0.8401365013324235	0.6754105404570148	0.7756867295684078	0.7581564682341104	1.0	11.031019083758498	-8.552269813142212	24.965033642322762	0.7799281965914371	0.8512497529163753	0.02491661466950479	0.12187307995910093	584.561788699911	496526.6710272067	0.04408145990089276	0.03414572631134755	2.80369125389376e-09	8.552269813142212	0.0713215563249382	
RS(ph)SMSMEETEHTC	ddPTM_K562_Methotrexat_30min_R1	1	RSSMSMEETEHTC	13	1	O75030-11;O75030-10;O75030-9;O75030-12;O75030-4;O75030-3;O75030-8;O75030-7;O75030-6;O75030-2;O75030-5;O75030	O75030-11	MITF	Microphthalmia-associated transcription factor	1	RS(0.481)S(0.481)MS(0.034)MEET(0.004)EHTC	69.45100000000001	0.02114	1292200.0	132.46	217.31	0.0	186.79	0.0	0.0	0.0	155.8	146.55	156.94	True	False	126.63721700312563	253.2167838615693	0.0	170.41441071018392	0.0	0.0	0.0	150.32042569171938	139.7369224872499	128.51664522030669	0.9853759937947393	1.9703034064381177	0.0	1.3260104200359024	0.0	0.0	0.0	1.1696572489426258	1.087306023649381	1.0	7.005811416288061														
RS(ph)SPAAFINPPIGTVTPALK	ddPTM_K562_Methotrexat_30min_R1	1	RSSPAAFINPPIGTVTPALK	20	1	Q6R954;F8WEE2;Q8WUT1;F8WCX5;F6VRR5;Q9BY77-2;Q9BY77	Q6R954	PDIP46;POLDIP3	Polymerase delta-interacting protein 3	1	RS(0.5)S(0.5)PAAFINPPIGTVTPALK	104.77	0.00014946	15913000.0	2885.1	2556.7	4401.5	3756.9	2031.3	2346.4	2018.4	3074.0	2892.6	4065.9	True	False	2758.2744585211967	2979.1512185305514	3477.685300056418	3427.5384099635417	2298.451554482404	2799.8085919242126	2471.0775796960374	2965.885677640214	2758.123657363489	3329.526110623453	0.8284285411429648	0.8947673391192317	1.0444985816330548	1.0294373121229963	0.6903239314293947	0.8409030291100342	0.74217095694538	0.890783126216377	0.8283832490645436	1.0	11.701101138683883	-6.248340589084577	21.748930519769324	0.8788099832771291	0.8284283327255514	0.02015249946348685	0.11108705010301961	2194.8892986764426	3643924.2672930947	0.029415698011247025	0.4534682955697597	5.644941049465063e-07	6.248340589084577	-0.05038165055157773	
RS(ph)SPPGHYYQK	ddPTM_K562_Methotrexat_30min_R1	1	RSSPPGHYYQK	11	1	Q9NX40;D6RG39;Q9NX40-4;Q9NX40-2;Q9NX40-3;D6RIT9;D6RBN5;D6RDK6;D6RI08;D6RIV2;D6RDK1;D6R9T5	Q9NX40	OCIAD1	OCIA domain-containing protein 1	1	RS(0.5)S(0.5)PPGHYYQK	97.779	0.014924000000000002	42204000.0	6405.5	4918.0	8554.8	7124.6	4947.9	4840.8	4300.6	5740.4	6012.8	7805.0	True	False	6123.92188972914	5730.615908293208	6759.26438825915	6499.997379655099	5598.635576440451	5776.216089237436	5265.119024594123	5538.506878310308	5733.266240404887	6391.438868003659	0.9581444829874315	0.8966081076017776	1.0575497204701232	1.016984987871025	0.8759585583252496	0.9037426796263193	0.8237767947608741	0.8665508647883288	0.8970227766874739	1.0	12.641925038065027	-7.771267167629066	24.933148159785755	0.8847612522199563	0.9815728382573871	0.3541023421774625	0.057195477329946176	203.04240415866147	515117.9350159984	0.017916225170449638	0.02056236572660155	1.6932958046960565e-08	7.771267167629066	0.09681158603743079	
RS(ph)SPSARPPDVPGQQPQAAK	ddPTM_K562_Methotrexat_30min_R1	2	RSSPSARPPDVPGQQPQAAK	20	2	A0A0A6YYC7;Q96JP5-2;Q96JP5	A0A0A6YYC7	ZFP91-CNTF;ZFP91	E3 ubiquitin-protein ligase ZFP91	1	RS(0.448)S(0.448)PS(0.104)ARPPDVPGQQPQAAK;RS(0.493)S(0.493)PS(0.015)ARPPDVPGQQPQAAK	76.744	0.021629	47427000.0	4810.2	3567.0	6703.7	4774.3	3886.2	3492.3	3042.7	4827.6	4666.6	5135.9	True	False	4598.749367570852	4156.386121366793	5296.684981480905	4355.7445315789455	4397.303417038112	4167.137549257128	3725.1029289244634	4657.810571690274	4449.65078457182	4205.738742111462	1.093446276518375	0.988265409772008	1.2593946762422388	1.0356669300366894	1.0455484010474878	0.9908217806142294	0.8857190513584544	1.1074892800763587	1.0579950532870959	1.0	12.038143518191879	-7.500747086016981	24.733301020454334	1.0149075276746644	1.1088871743226674	0.22909752083730872	0.08142440568489685	1067.4051737671632	1192882.1676433783	0.023460903944301687	0.03444689229547613	3.1568424942388996e-08	7.500747086016981	0.09397964664800296	
RS(ph)SSFGNFDR	ddPTM_K562_Methotrexat_30min_R1	1	RSSSFGNFDR	10	1	Q9NSI8	Q9NSI8	SAMSN1	SAM domain-containing protein SAMSN-1	1	RS(0.405)S(0.191)S(0.405)FGNFDR	91.09299999999999	0.011335	75266000.0	2356.1	1923.2	2337.4	2359.7	1916.6	2006.6	2182.7	2585.3	2047.4	2793.6	True	False	2252.5286651144834	2240.976111189406	1846.81168246095	2152.8287646705976	2168.6664940289334	2394.3470510378115	2672.226037060317	2494.373533638012	1952.216820882944	2287.651969462525	0.9846465700128794	0.979596608707886	0.8072957369012959	0.94106480942396	0.9479879470208282	1.046639560125203	1.1681086427181258	1.0903640793857534	0.8533714249119851	1.0	11.159651869941833	-8.191680749099364	3.936688471973085	1.0461360651796767	0.9257172030263818	0.2378182993471919	0.08764873814230956	0.31943896895873536	9.71134862926838	0.03141610860086215	0.03092711183186409	6.4316033226670345e-09	8.191680749099364	-0.12041886215329489	
RS(ph)TS(ph)PIIGS(ph)PPVR	ddPTM_K562_Methotrexat_30min_R1	2	RSTSPIIGSPPVR	13	1	Q86TB9-2;Q86TB9-4;Q86TB9	Q86TB9-2	PATL1	Protein PAT1 homolog 1	3	RS(0.621)T(0.621)S(0.758)PIIGS(1)PPVR;RS(0.605)T(0.605)S(0.789)PIIGS(1)PPVR	76.22800000000001	0.019231	53724000.0	202.42	153.09	162.32	240.23	172.245	119.19	137.0	0.0	158.82	166.06	True	False	193.52185917086436	178.3855204149263	128.25125023404698	219.16940888113643	194.89823659814982	142.22178063051769	167.72573742486972	0.0	151.43649286540452	135.9849248456998	1.4231125942118286	1.311803647480321	0.9431284414766702	1.6117184248902952	1.4332341384112846	1.045864317621198	1.2334142009872475	0.0	1.1136270659210012	1.0	7.087302914369214	-9.041549279633193	24.840402338031296	0.6574291664068858	1.2869063134199208	0.3953821619970854	0.328642000613128	419.0629912545834	250536.63400045258	0.14656977354481096	0.08463386488179332	9.087631753587295e-10	9.041549279633193	0.629477147013035	
RS(ph)TSPIIGSPPVR	ddPTM_K562_Methotrexat_30min_R1	1	RSTSPIIGSPPVR	13	1	Q86TB9-2;Q86TB9-4;Q86TB9	Q86TB9-2	PATL1	Protein PAT1 homolog 1	1	RS(0.756)T(0.184)S(0.06)PIIGSPPVR	118.16	0.0011078	105780000.0	5168.6	4614.6	6103.8	5084.5	4728.6	4236.8	4298.2	5079.5	5135.3	6302.8	True	False	4941.394532706893	5377.084215211438	4822.695793362345	4638.749779195517	5350.493782565599	5055.501637514704	5262.180763500548	4900.851105911993	4896.561023874268	5161.3018446192755	0.9573930534325098	1.0418077409708404	0.9343952240247426	0.8987557633412728	1.0366558561467507	0.9795012556347834	1.0195452469005355	0.9495377820270663	0.9487065804878273	1.0	12.333519289824153	-6.768435149604119	24.989304403495687	0.9709031865782126	0.9996003977338561	0.06602372712783133	0.04319744402671729	440.09222874790095	1572056.012848679	0.011545942069215439	0.02489609289304361	1.7043738034699206e-07	6.768435149604119	0.0286972111556435	
RS(ph)Y(ph)EDDDDMDLQPNK	ddPTM_K562_Methotrexat_30min_R1	1	RSYEDDDDMDLQPNK	15	1	Q9BTE3;Q9BTE3-2	Q9BTE3	MCMBP	Mini-chromosome maintenance complex-binding protein	2	RS(1)Y(1)EDDDDMDLQPNK	56.358999999999995	0.030925	0.0	1933.1	1340.8	3519.8	2279.3	1339.0	1142.1	1034.7	1805.1	1493.5	2382.2	True	False	1848.1232386285833	1562.3444102967753	2781.0420809130014	2079.477307841544	1515.1019698970806	1362.7946611134687	1266.7578139672469	1741.6136098595807	1424.067510984018	1950.760496010032	0.9473860283764323	0.8008899162620426	1.425619437445641	1.065982888260646	0.7766724685044519	0.6985966057344543	0.649366140312046	0.8927869994403579	0.7300063302987322	1.0	10.929820947063678	-7.761722267845964	9.537227719841953	0.7739936676843795	1.067801120513558	0.3618351580364131	0.17381571159220544	0.10630031242976863	147.7682516841404	0.05408115942855284	0.06537442087700054	1.7309229338847374e-08	7.761722267845964	0.29380745282917853	
RSAS(ph)PDDDLGSSNWEAADLGNEER	ddPTM_K562_Methotrexat_30min_R1	1	RSASPDDDLGSSNWEAADLGNEER	24	1	E9PQA1;E9PM92;O00193	E9PQA1	C11orf58;SMAP	Small acidic protein	1	RS(0.37)AS(0.63)PDDDLGSSNWEAADLGNEER	122.29	9.508999999999999e-10	33010000.0	880.48	978.54	1255.3	1063.8	805.95	924.56	799.24	1037.9	809.96	1353.0	True	False	841.7751534569836	1140.2271026639355	991.8296846894968	970.53830565605	911.9465516344667	1103.218134908561	978.4899151784884	1001.3964687126794	772.3051363887607	1107.95858916194	0.7597532630652762	1.029124295634915	0.8951866020910736	0.8759698378169218	0.8230872169367478	0.9957214517764924	0.8831466489362372	0.9038212064136223	0.6970523482948333	1.0	10.113688245176292														
RSAS(ph)PHDVDLCLVSPCEFEHR	ddPTM_K562_Methotrexat_30min_R1	1	RSASPHDVDLCLVSPCEFEHR	21	1	Q66K74-2;Q66K74	Q66K74-2	MAP1S	Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain	1	RS(0.209)AS(0.791)PHDVDLCLVSPCEFEHR	83.666	0.0032296	51135000.0	837.33	721.43	1068.1	903.77	735.54	762.84	650.94	1113.9	907.81	1354.5	True	False	800.5219757906325	840.6340452866955	843.9204064501325	824.5378872934464	832.276402492978	910.2480336956463	796.929865104706	1074.7235056354698	865.6061112463342	1109.1869246266428	0.7217196290517864	0.7578831183658756	0.7608459743917373	0.7433714453233294	0.7503481911068559	0.8206443958957051	0.7184811210905285	0.9689291153492694	0.7803969664875927	1.0	10.115286799401769	-10.09148660300358	0.38788249642565265	1.0169156736747211	0.7300792744697727	0.6125300364167523	0.05939574302188611	0.970211334549808	0.3755907577724146	0.09624469564838492	0.047895971598614424	8.100529295843378e-11	10.09148660300358	-0.2868363992049484	
RSATSTSAS(ph)PTLR	ddPTM_K562_Methotrexat_30min_R1	2	RSATSTSASPTLR	13	1	O75061-4;O75061;O75061-2	O75061-4	DNAJC6	Putative tyrosine-protein phosphatase auxilin	1	RSATSTS(0.003)AS(0.582)PT(0.414)LR;RSATSTSAS(0.994)PT(0.006)LR	149.6	4.1794999999999995e-09	12581100.0	1628.4099999999999	1605.1100000000001	1720.46	2102.2	1564.3899999999999	1507.8600000000001	1316.42	1933.92	1937.13	2095.2	True	False	1556.8270462030785	1870.3271452949405	1359.3589574770115	1917.9033898760572	1770.1347055170227	1799.2326045937784	1611.6606953346502	1865.902937443709	1847.0732491144768	1715.7389770968934	0.907379891105172	1.0901000503349392	0.7922877405146482	1.1178293525284568	1.0317039649656787	1.0486633623245885	0.9393390934451181	1.0875214483970632	1.0765467671777247	1.0	10.744614370662989	-7.300639823034147	24.999999046688004	1.042168311895683	0.945939918134307	0.2794397743707535	0.082064080844276	750.9033904817844	478885.0158811496	0.02220866348855461	0.032941391982104586	5.004494046842086e-08	7.300639823034147	-0.09622839376137604	
RSDLDLGYEPEGSAS(ph)PTPPYLK	ddPTM_K562_Methotrexat_30min_R1	1	RSDLDLGYEPEGSASPTPPYLK	22	1	O15169-2;O15169	O15169-2	AXIN1	Axin-1	1	RSDLDLGYEPEGS(0.029)AS(0.762)PT(0.206)PPY(0.003)LK	79.36	0.0015385	8234700.0	4210.4	3270.7	5482.4	4341.4	3416.8	2993.3	3130.0	4206.1	4732.3	5835.7	True	False	4025.3158573906076	3811.127582605653	4331.719161428902	3960.796202458334	3866.1690894281855	3571.712861492815	3831.9821762032266	4058.169078959827	4512.296405912063	4778.798180910819	0.8423280718298506	0.797507540249224	0.9064453022377469	0.8288268415016896	0.8090253957306291	0.7474081821994965	0.801871523160425	0.8492028592398847	0.9442324691460476	1.0	12.22243212536903	-9.825381253113967	2.445375969034827	0.9980849343574922	0.8188940236556275	0.724887804482057	0.03792378818301071	0.15017769588308597	1.7510834551283454	0.03884722117871481	0.010871382920664155	1.494922735454833e-10	9.825381253113967	-0.17919091070186477	
RSDLDLGYEPEGSASPT(ph)PPYLK	ddPTM_K562_Methotrexat_30min_R1	1	RSDLDLGYEPEGSASPTPPYLK	22	1	O15169-2;O15169	O15169-2	AXIN1	Axin-1	1	RSDLDLGYEPEGS(0.076)AS(0.049)PT(0.87)PPY(0.005)LK	82.03399999999999	0.001588	14208000.0	1301.7	821.54	1575.1	1221.0	843.67	787.25	709.23	1178.3	1405.0	1526.4	True	False	1244.4788266115713	957.2855212076456	1244.5080350150781	1113.9568257247956	954.6273927879527	939.3749207263619	868.2928814148938	1136.8585211332024	1339.6818566672544	1249.9541688815862	0.9956195655758211	0.7658564970139586	0.9956429331553964	0.8911981362656872	0.7637299163073465	0.751527491257444	0.6946597747594305	0.9095201643676443	1.0717847822100175	1.0	10.287659482317904	-9.580959312871247	5.192975961588408	1.0293930606995352	0.8339503839178253	0.3964365684094251	0.09708580213945195	0.21249894939901745	11.690940735441105	0.07212892367421829	0.0261340283913159	2.62446440632733e-10	9.580959312871247	-0.1954426767817099	
RSDS(ph)LLSFR	ddPTM_K562_Methotrexat_30min_R1	2	RSDSLLSFR	9	1	Q00587-2;Q00587	Q00587-2	CDC42EP1	Cdc42 effector protein 1	1	RSDS(1)LLSFR;RS(0.09)DS(0.91)LLS(0.001)FR	132.03	0.00077503	44460000.0	3825.2	3397.0	2852.6000000000004	3490.4	3216.0	2787.8999999999996	3077.0	3986.7	5190.8	5310.2	True	False	3657.048788165151	3958.2965108727176	2253.8782430855267	3184.4020511955987	3638.960369820021	3326.6222184731955	3767.0955770534615	3846.4855013169295	4949.4808409881725	4348.471323109929	0.8409964137810416	0.9102731090432564	0.5183150757157584	0.732303794731751	0.8368366948818967	0.765009579526	0.866303419556489	0.8845603927234846	1.1382116779025728	1.0	12.086292604664234	-9.361367006436605	1.5222533517294938	1.0622642072965423	0.7639808753627356	0.5250481275015235	0.10720905494755995	0.34232344281893684	1.402378864299018	0.0935914476295618	0.0336622144889968	4.351439939383173e-10	9.361367006436605	-0.29828333193380663	
RSDS(ph)PEIPFQAAAGPSDGLDASS(ph)PGNSFVGLR	ddPTM_K562_Methotrexat_30min_R1	2	RSDSPEIPFQAAAGPSDGLDASSPGNSFVGLR	32	1	A6NNK5;Q12888;Q12888-3;Q12888-2	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	2	RS(0.095)DS(0.904)PEIPFQAAAGPS(0.003)DGLDAS(0.198)S(0.75)PGNS(0.05)FVGLR;RS(0.089)DS(0.911)PEIPFQAAAGPSDGLDAS(0.046)S(0.924)PGNS(0.029)FVGLR	100.89	1.0343e-09	31256000.0	2086.95	1467.25	1894.0	1959.47	1715.92	1465.12	1758.5900000000001	2351.7	2627.7	2637.4	True	False	1995.2101768433708	1709.688123514277	1496.4752830414304	1787.6863073734364	1941.5935565241202	1748.2337044834637	2152.9985735620567	2268.9893780437515	2505.538800544158	2159.741303071473	0.9238190583316093	0.7916170890850893	0.692895617133969	0.8277316847305188	0.8989935756485676	0.8094644029806791	0.9968779920540358	1.0505838707705	1.160110609998017	1.0	11.076642799306642	-8.913019894267002	2.1289681201558706	1.082082659318919	0.8165733950585494	0.7197949836631781	0.07023178763450756	0.17090405688284496	1.561490086947209	0.039173900083227804	0.022424302437339904	1.2217436929514773e-09	8.913019894267002	-0.2655092642603696	
RSDS(ph)PEIPFQAAAGPSDGLDASSPGNSFVGLR	ddPTM_K562_Methotrexat_30min_R1	4	RSDSPEIPFQAAAGPSDGLDASSPGNSFVGLR	32	1	A6NNK5;Q12888;Q12888-3;Q12888-2	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	RS(0.217)DS(0.783)PEIPFQAAAGPSDGLDASSPGNSFVGLR;RS(0.245)DS(0.755)PEIPFQAAAGPSDGLDASSPGNSFVGLR;RS(0.272)DS(0.728)PEIPFQAAAGPSDGLDASSPGNSFVGLR;RS(0.126)DS(0.874)PEIPFQAAAGPSDGLDASSPGNSFVGLR	138.99	7.6383e-29	391017000.0	4270.9	3108.98	3531.0499999999997	3803.04	3332.0800000000004	2928.16	3346.96	4431.15	4803.24	5001.5	True	False	4083.1563498312644	3622.686101375647	2789.9308596533506	3469.633387800513	3770.306924462032	3493.9854784047043	4097.60097906235	4275.303942900271	4579.93842079603	4095.6798844740897	0.9969422574527127	0.884513976570418	0.6811887008624442	0.8471446708892473	0.9205570334621409	0.8530904701926805	1.0004690538915268	1.0438569574509717	1.1182364222745211	1.0	11.999887244353175	-8.889960015444696	2.254098159702833	1.0620047128741776	0.855518577267608	0.5444361489198453	0.07968388611662781	0.24382338932891595	2.5071360689334012	0.043908218721420256	0.026003972282921797	1.2883681635081001e-09	8.889960015444696	-0.2064861356065696	
RSDS(ph)VSASER	ddPTM_K562_Methotrexat_30min_R1	1	RSDSVSASER	10	1	O43719	O43719	HTATSF1	HIV Tat-specific factor 1	1	RS(0.027)DS(0.946)VS(0.027)ASER	106.54	0.0025629000000000003	3631600.0	552.08	363.23	620.96	395.52	363.64	350.13	364.97	590.52	452.15	721.38	True	False	527.8112242419271	423.24758364565713	490.62898192048937	360.8453756844152	411.4650338561419	417.78766718821333	446.82381305076416	569.7510768900777	431.12964519010603	590.7310916848783	0.8934881398175748	0.7164809667262881	0.8305453849079139	0.6108454096350593	0.6965352588477521	0.7072383239497397	0.7563912232490371	0.9644846613118643	0.7298238593815025	1.0	9.206357736455388	-10.100243692802746	0.7126506226382714	0.991477619845924	0.7393161683284875	0.34483605575468224	0.09737736802752937	0.9152914312856626	1.0436123276762055	0.09691680198250767	0.03741665099913225	7.938826435801874e-11	10.100243692802746	-0.2521614515174365	
RSEACPCQPDS(ph)GSPLPAEEEKR	ddPTM_K562_Methotrexat_30min_R1	1	RSEACPCQPDSGSPLPAEEEKR	22	2	A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160-2;Q14160;Q14160-3	A0A0G2JMS7	SCRIB	Protein scribble homolog	1	RSEACPCQPDS(0.604)GS(0.396)PLPAEEEKR	98.92399999999999	0.00018592	12288000.0	1481.9	1023.1	2303.7	1782.8	1061.0	948.8	1012.9	1339.0	1374.7	2198.1	True	False	1416.7574503769579	1192.149885273441	1820.1848519232021	1626.504691975566	1200.5400971327877	1132.1421718452493	1240.0686090339464	1291.9066110475758	1310.7904970537181	1800.0027899755064	0.7870862524586623	0.6623044652556695	1.0112122392587906	0.9036123171774076	0.6669656868415876	0.628966898357227	0.6889259371930311	0.7177247825627845	0.7282158140830186	1.0	10.813783427372986	-7.7653031050953985	24.999030882478447	0.716400746556359	0.8404401822054758	0.12307089096724899	0.12615311070415683	175.74044574540324	1137073.0201647226	0.03872901754789464	0.04557043717899276	1.7167098337743025e-08	7.7653031050953985	0.12403943564911679	
RSES(ph)PPAELPSLR	ddPTM_K562_Methotrexat_30min_R1	1	RSESPPAELPSLR	13	1	H7C1L9;G5E9G6;Q14669;Q14669-2;Q14669-3	H7C1L9	TRIP12	E3 ubiquitin-protein ligase TRIP12	1	RS(0.093)ES(0.894)PPAELPS(0.013)LR	89.46600000000001	0.014778999999999999	22281000.0	1316.2	1327.8	1401.4	1420.1	1150.8	1257.6	1236.8	1352.3	1380.7	1190.0	True	False	1258.3414239733813	1547.1963812589922	1107.2652912641288	1295.6020378474873	1302.1503711408218	1500.6134014677334	1514.1838835553203	1304.738842509063	1316.5115583633294	974.4794686642348	1.2912959835862419	1.5877157303065683	1.1362633353188136	1.3295324114149172	1.3362522382598179	1.5399127941861057	1.5538386720767796	1.338908498808631	1.3509895289717435	1.0	9.928487979395062	-10.412710942932447	1.903863398004395	1.0001459415106482	1.393913045183362	0.4401937273132789	0.13095945416139934	2.4646985991773342	10.18699679635062	0.12914227961876493	0.035964523609101476	3.8662422020334375e-11	10.412710942932447	0.3937671036727137	
RSFPEPEEPPEGGS(ph)Y(ph)AGSLAE	ddPTM_K562_Methotrexat_30min_R1	1	RSFPEPEEPPEGGSYAGSLAE	21	1	M0QZX0	M0QZX0	LTBP4		2	RSFPEPEEPPEGGS(0.939)Y(0.753)AGS(0.308)LAE	44.468	0.028555	74357000.0	64.172	0.0	146.21	63.858000000000004	49.00899999999999	63.743	0.0	124.68	170.19	0.0	True	False	61.35107571738321	0.0	115.52251907787098	58.25966828594103	55.454542526277805	76.06043260954017	0.0	120.29493373070328	162.2779040471175	0.0											0.0														
RSIT(ph)S(ph)PPS(ph)TSTTK	ddPTM_K562_Methotrexat_30min_R1	1	RSITSPPSTSTTK	13	1	C9JWJ8;K7EN08;Q14938-6;Q14938-5;Q14938-3;Q14938-2;Q14938-4;Q14938	C9JWJ8	NFIX	Nuclear factor 1;Nuclear factor 1 X-type	3	RS(0.388)IT(0.806)S(0.806)PPS(0.2)T(0.2)S(0.2)T(0.2)T(0.2)K	53.556999999999995	0.033717000000000004	7819600.0	2110.3	2591.1	3254.1	2358.4	2781.9	2576.3	2441.5	2940.9	3345.2	3991.3	True	False	2017.533738801873	3019.235233830527	2571.1088799076647	2151.642733652217	3147.7686109459946	3074.133513200795	2989.0685249840853	2837.4668800820127	3189.682382151814	3268.4368935122334	0.6172778623343249	0.9237550952333313	0.7866478575771961	0.6583094010238273	0.9630807366035543	0.9405515888352851	0.914525390077842	0.8681418587932093	0.9759045335962444	1.0	11.674385126767193	-7.777804052281911	24.990005873497267	0.9354915898972499	0.7620266758532479	0.5677067230929618	0.08368314758025834	196.69010409541568	300358.340358791	0.025608113676319943	0.029120970131830282	1.6679996213687152e-08	7.777804052281911	-0.173464914044002	
RSNS(ph)SGNLHMAGLTASPTPPSSSIITY	ddPTM_K562_Methotrexat_30min_R1	2	RSNSSGNLHMAGLTASPTPPSSSIITY	27	1	Q9UKI8-4;Q9UKI8-5;Q9UKI8;Q9UKI8-2;Q9UKI8-3	Q9UKI8-4	TLK1	Serine/threonine-protein kinase tousled-like 1	1	RS(0.095)NS(0.561)S(0.316)GNLHMAGLT(0.017)AS(0.004)PT(0.004)PPSSSIITY;RS(0.389)NS(0.444)S(0.166)GNLHMAGLTASPTPPSSSIITY	84.515	0.0001035	60378000.0	2169.3	1690.37	2099.96	1920.46	1871.86	1563.49	1487.75	1838.65	2193.7	2704.2	True	False	2073.9401694464786	1969.6749111227318	1659.2070936513628	1752.096253506504	2118.042399829385	1865.612314774797	1821.4158091521892	1773.9836373432584	2091.7153658156276	2214.443175766237	0.9365515413277011	0.8894673535441654	0.7492660510817792	0.7912130113251822	0.9564672613902159	0.8424746840158867	0.8225163910660959	0.8010969334218424	0.94457847855674	1.0	11.112728261748908	-9.945022272367776	4.93504053376834	0.9993111805317618	0.847680830731224	0.4095309044637043	0.061077324259958016	0.17487440145192637	8.39731872854244	0.061714706420645325	0.01610508315190454	1.1349526092451859e-10	9.945022272367776	-0.1516303498005378	
RSNVSSPATPTASSSSST(ph)TPTR	ddPTM_K562_Methotrexat_30min_R1	1	RSNVSSPATPTASSSSSTTPTR	22	1	A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	RSNVSSPATPTAS(0.041)S(0.007)S(0.005)S(0.019)S(0.019)T(0.5)T(0.326)PT(0.083)R	95.889	8.0795e-05	3887900.0	865.87	800.28	638.26	572.95	663.79	646.76	619.22	749.98	813.76	912.37	True	False	827.8073915634637	932.5126675658577	504.2979483389777	522.7203630622615	751.090019864065	771.7372165499927	758.0958476512981	723.6027783072891	775.9284752181815	747.1309519539388	1.10798165890268	1.2481247967670168	0.6749793286171712	0.6996368731548517	1.0052990281017968	1.0329343397321475	1.0146760024714319	0.9685086348181433	1.0385441443550554	1.0	9.54521732057632	-7.952141125782946	24.99995227013386	1.010302619989456	0.9262631470276554	0.05290467497374263	0.15946828873766777	428.98551933763036	224086.47712801123	0.05507185057098724	0.06244559089289189	1.1165003774234992e-08	7.952141125782946	-0.08403947296180059	
RSNVSSPATPTASSSSSTT(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	2	RSNVSSPATPTASSSSSTTPTR	22	1	A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	RSNVSSPATPTASS(0.017)S(0.017)S(0.067)S(0.067)T(0.178)T(0.476)PT(0.178)R;RSNVSSPATPTASSS(0.001)S(0.014)S(0.014)T(0.206)T(0.636)PT(0.128)R	120.27	1.5938999999999999e-06	7937700.0	1406.21	1331.02	1768.1100000000001	1586.6399999999999	1511.4	1253.45	1473.9499999999998	1571.52	1300.58	1564.94	True	False	1344.3946921483112	1550.9484315283498	1397.0078736527892	1447.5417346175172	1710.1755917120581	1495.6614727017566	1804.5208078641372	1516.248750853985	1240.116319675657	1281.5142014213502	1.0490673381982183	1.2102467766710392	1.0901228188523724	1.1295557497622912	1.3344960124634373	1.167104875656385	1.408116122211296	1.1831696825304678	0.967696119403298	1.0	10.323633750967451	-9.738852334990712	6.970393197633225	0.9829115193411098	1.2023642243265735	0.4113042677310096	0.10163118290446957	0.14358513090465463	27.589568233096344	0.07703772541359491	0.026603489707048907	1.824515952815788e-10	9.738852334990712	0.21945270498546376	
RSPGSGR	ddPTM_K562_Methotrexat_30min_R1	1	RSPGSGR	7	1	Q5T230	Q5T230	UTF1	Undifferentiated embryonic cell transcription factor 1	0		56.547	0.033154	0.0	7900.1	5923.5	8772.2	8080.3	6521.1	5699.1	4987.8	6720.6	7329.9	8689.7	False	True	7552.821063312648	6902.257692715504	6931.0350992059375	7371.912644475078	7378.738951378528	6800.370416908998	6106.441117720914	6484.232688727654	6989.1345488863435	7115.911125085381	1.0613990156070174	0.9699752528363241	0.9740193458533076	1.0359759298408362	1.0369352317184812	0.9556570195116655	0.858139036643413	0.9112301397173299	0.982184069759933	1.0	12.796832776689408	-8.45052948084853	5.639917125265075	0.9273687184063799	1.0112086164478216	0.3988352264521938	0.045005435461473	0.21582443968809145	12.478890596250444	0.016402409439482474	0.014251230286356647	3.5438107331092856e-09	8.45052948084853	0.08383989804144165	
RSPQQTVPYVVPLS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	RSPQQTVPYVVPLSPK	16	1	Q9UQR0;H0Y6S1;B4DRC2	Q9UQR0	SCML2	Sex comb on midleg-like protein 2	1	RSPQQTVPYVVPLS(1)PK;RSPQQTVPYVVPLS(1)PK	107.47	0.00077046	32183000.0	5048.9	3689.3	7015.400000000001	5338.3	4261.8	3601.5	3692.8	4968.4	5372.8	6542.2	True	False	4826.956401382158	4298.894117622231	5542.963411113436	4870.299527245434	4822.3014005282885	4297.438903773887	4521.0044026464175	4793.658555884073	5123.019700713043	5357.344184785843	0.9009980010412777	0.8024300790362747	1.03464762015006	0.9090884138219918	0.9001291002028569	0.8021584493260769	0.84388910749574	0.8947826367955669	0.9562610733993439	1.0	12.387302270234796	-9.89107592832148	2.859010416720115	0.9984211508606003	0.8846999593472128	0.27250120469856853	0.0623579287331768	0.33752092282085827	5.500879023014612	0.06212946000620329	0.016879123163491817	1.2850619710921444e-10	9.89107592832148	-0.11372119151338755	
RSQS(ph)DCGELGDFR	ddPTM_K562_Methotrexat_30min_R1	4	RSQSDCGELGDFR	13	1	Q6JBY9;B7ZKW8;F6T4W9	Q6JBY9	RCSD1	CapZ-interacting protein	1	RSQS(1)DCGELGDFR;RS(0.068)QS(0.932)DCGELGDFR;RS(0.023)QS(0.977)DCGELGDFR;RSQS(1)DCGELGDFR	153.41	3.3855000000000004e-09	63802000.0	5551.799999999999	3872.63	6426.299999999999	5375.299999999999	4677.200000000001	4856.9	4502.05	5033.0	5086.67	5603.5	True	False	5307.749519537618	4512.516284045044	5077.507450585611	4904.0557946916415	5292.333781630041	5795.427186377727	5511.74931513602	4855.986537268446	4850.191821959875	4588.651850974819	1.1567121873519413	0.9834078571653674	1.106535779023405	1.0687356447950649	1.1533526520443538	1.2629912607439455	1.2011696450592775	1.0582599628334919	1.0569971267115184	1.0	12.163854635773616	-5.2475174352470395	16.36067037637011	1.110526087436874	53.88557244390641	0.0	0.08435856543075664	0.0	0.0	0.02042206578791109	0.0	5.655650513796938e-06	5.2475174352470395	52.77504635646954	
RSQSRGTFT(ph)IS(ph)T(ph)TLRLGR	ddPTM_K562_Methotrexat_30min_R1	1	RSQSRGTFTISTTLRLGR	18	3	H3BTY5;A0A0B4J292;Q8IWY7;Q6IQ55-3;Q6IQ55-2;Q6IQ55	H3BTY5	TTBK2	Tau-tubulin kinase 2	3	RSQS(0.172)RGT(0.323)FT(0.514)IS(0.915)T(0.873)T(0.203)LRLGR	73.464	0.016952000000000002	0.0	2009.3	2065.0	2697.3	2552.7	2048.0	1883.0	1867.0	2287.7	2129.9	2384.6	True	False	1920.9735778678873	2406.206151001521	2131.1735907854536	2328.908754322428	2317.3478971988197	2246.8631003210417	2285.722275709722	2207.2402943192974	2030.8814138900955	1952.7258327535574	0.9837395222856781	1.232229384505303	1.0913839285775542	1.192645027406849	1.1867246585922948	1.1506290656034996	1.1705290304305562	1.1303380419804487	1.0400238373588422	1.0	10.931273690367659	-9.818117057557313	2.812942151381732	1.0015269008328742	1.1494470041726395	0.3727863604703566	0.06436794736797743	0.2405347440272424	3.615043298097124	0.056273035917225524	0.015591252859313374	1.5201377442028604e-10	9.818117057557313	0.14792010333976524	
RSRGSPRYS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	RSRGSPRYSPR	11	3	J3KTL2;Q07955;J3KSR8	J3KTL2	SRSF1	Serine/arginine-rich splicing factor 1	1	RSRGSPRY(0.001)S(0.999)PR	106.26	0.0062201999999999995	106970000.0	1517.8	1581.7	2066.3	1763.1	1976.1	1982.0	1331.1	2108.4	2270.1	2302.4	True	False	1451.0793293624045	1843.0490406969031	1632.6118676602473	1608.5317603893416	2235.9917869407163	2364.9934491961244	1629.6330590236805	2034.246376947504	2164.5635464913403	1885.4130492878442	0.7696347120916047	0.9775306484661583	0.8659173480723046	0.8531455539659674	1.1859426706446592	1.2543635730586604	0.8643374244382277	1.0789393749639513	1.1480580063392138	1.0	10.880664903052692	-7.748792317229905	24.99122773604123	1.0896281763409215	0.8744380006232825	0.4941628069513896	0.10994066437790051	209.82698199599216	414626.92587325565	0.033456478814473896	0.042897009784847714	1.7832313177294214e-08	7.748792317229905	-0.215190175717639	
RSS(ph)ADFGLLAR	ddPTM_K562_Methotrexat_30min_R1	3	RSSADFGLLAR	11	1	A0A1C7CYX0	A0A1C7CYX0			1	RS(0.089)S(0.911)ADFGLLAR;RS(0.031)S(0.969)ADFGLLAR;RS(0.345)S(0.655)ADFGLLAR	157.33	1.0542e-07	88038000.0	5061.0	3924.21	5870.8	5212.5	4204.3	4673.6	4902.7	5830.599999999999	5163.900000000001	6850.2	True	False	4838.524499870295	4572.6190023349545	4638.599309228948	4755.528217928334	4757.2391426723625	5576.707055581738	6002.255276444589	5625.5344931844575	4923.831416116749	5609.56240020482	0.8625493674325875	0.8151471854859831	0.8269092984970772	0.8477538671741485	0.8480588686380711	0.9941429754624207	1.0700041907414082	1.0028472974966915	0.8777567775940895	1.0	12.453672515803037	-8.249194108965707	5.680710835737135	0.9946665198144604	0.8376444405686494	0.7264304165170308	0.04562792262778186	0.09132631660810055	11.232829790829506	0.016244253495759527	0.015511390094273948	5.633857929063979e-09	8.249194108965707	-0.15702207924581102	
RSS(ph)AIGIENIQEVQEK	ddPTM_K562_Methotrexat_30min_R1	1	RSSAIGIENIQEVQEK	16	1	F2Z357;J3KPC5;P47736;P47736-3;P47736-4;A0A0A0MQY8;X6R8W7;P47736-2	F2Z357	RAP1GAP	Rap1 GTPase-activating protein 1	1	RS(0.231)S(0.769)AIGIENIQEVQEK	128.66	7.5424e-05	13066000.0	2031.5	1517.0	2638.6	1979.7	1804.9	1691.2	1607.7	2184.9	2597.4	3168.8	True	False	1942.197692449418	1767.658465408865	2084.793918602491	1806.1427746825368	2042.275986159252	2018.0004648236559	1968.267650058124	2108.0558285868924	2476.6474409306243	2594.8996137001895	0.748467371221327	0.6812049514656474	0.8034198731987497	0.6960357021700245	0.7870346796372113	0.7776795889017433	0.7585139863085025	0.8123843471466383	0.9544289990467323	1.0	11.341463012217012	-9.726363237992894	1.9349993734207294	1.003706913355801	0.7489818098524474	0.8643060992278447	0.035703150592350325	0.10607741504979382	0.752214274297144	0.032577252907928664	0.009626737887093523	1.8777456389470967e-10	9.726363237992894	-0.25472510350335353	
RSS(ph)DSWEVWGSASTNR	ddPTM_K562_Methotrexat_30min_R1	1	RSSDSWEVWGSASTNR	16	1	F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;E5RHH7;Q8N6T3-4	F8VWH9	ARFGAP1	ADP-ribosylation factor GTPase-activating protein 1	1	RS(0.02)S(0.98)DSWEVWGSASTNR	96.435	0.0027356999999999998	24480000.0	1388.9	1407.1	1453.1	1486.2	1094.0	1159.7	1153.2	1368.4	1298.4	1417.6	True	False	1327.8456190219026	1639.599358389463	1148.1141677864327	1355.9071534743573	1237.8801755544484	1383.795612024595	1411.8344554624803	1320.2725963834969	1238.0376673998308	1160.858903175142	1.1438475557968537	1.4124019326594184	0.9890212881566828	1.1680206352087459	1.0663485219165227	1.1920446216501284	1.2161981543156353	1.1373239183266217	1.0664841902952995	1.0	10.180976914867411	-15.999999991059775	0.07400897242984378	0.4687082152431919	1.3355651378852762	0.20502309008475916	0.10426233675998417	475.6113124665603	2.512946961300445	42.31372960024254	4.684609575330724	1.000000020585628e-16	15.999999991059775	0.8668569226420844	
RSS(ph)EEVDGQHPAQEEVPESPQTSGPEAENR	ddPTM_K562_Methotrexat_30min_R1	1	RSSEEVDGQHPAQEEVPESPQTSGPEAENR	30	1	Q6JBY9;B7ZKW8	Q6JBY9	RCSD1	CapZ-interacting protein	1	RS(0.263)S(0.737)EEVDGQHPAQEEVPESPQTSGPEAENR	98.225	1.0834999999999999e-08	32388000.0	720.97	622.07	732.54	832.9	591.63	520.1	612.22	576.0	644.77	865.59	True	False	689.2770220651023	724.8564941179254	578.7898647514091	759.8809501606731	669.4397150486998	620.6019641407185	749.5259194617066	555.741753520092	614.7947834329858	708.8232632614076	0.9724243796593667	1.0226195043073874	0.81655032326155	1.0720316185227063	0.9444381268872328	0.8755383694451998	1.0574228560346899	0.7840343035061187	0.8673456632958377	1.0	9.469282143048469	-9.265242881889503	24.95505240713245	0.86926749759404	0.9620866710061425	0.14624581429422867	0.08848178799268724	543.4212031126626	3565386.442785681	0.04388938719197392	0.022353357645647644	5.429466003062404e-10	9.265242881889503	0.09281917341210255	
RSS(ph)ITEPEGPNGPNIQK	ddPTM_K562_Methotrexat_30min_R1	4	RSSITEPEGPNGPNIQK	17	1	Q13625-2;Q13625;Q13625-3	Q13625-2	TP53BP2	Apoptosis-stimulating of p53 protein 2	1	RS(0.035)S(0.964)IT(0.001)EPEGPNGPNIQK;RS(0.024)S(0.973)IT(0.003)EPEGPNGPNIQK;RS(0.001)S(0.586)IT(0.413)EPEGPNGPNIQK;RS(0.017)S(0.983)ITEPEGPNGPNIQK	251.35	2.3531999999999993e-79	114617000.0	10847.2	6602.1	12876.9	11298.7	6594.200000000001	6756.8	6879.4	8126.9	8798.4	10976.5	True	False	10370.370076070541	7692.984808487716	10174.214663250363	10308.16051336343	7461.452882670142	8062.455972516845	8422.280569639777	7841.0723206292305	8389.36430441364	8988.549485540309	1.1537312102195285	0.8558649892135833	1.131908399638608	1.1468102311664359	0.8301064476168513	0.8969696373688267	0.9370010793386101	0.8723401181962673	0.9333390574207145	1.0	13.133872606313059	-7.763733677375707	24.999999875157165	0.9057789933140676	1.060908419665937	0.4310878680356329	0.089784810996184	60.8045149532347	662562.5088196269	0.027143194637655955	0.0322863211786627	1.7229248011430926e-08	7.763733677375707	0.15512942635186944	
RSS(ph)LPLDHGSPAQENPESEK	ddPTM_K562_Methotrexat_30min_R1	2	RSSLPLDHGSPAQENPESEK	20	1	Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;A0A0A0MRX3;X6R5W5	Q5VZ89-5	DENND4C	DENN domain-containing protein 4C	1	RS(0.234)S(0.764)LPLDHGS(0.002)PAQENPESEK;RS(0.27)S(0.719)LPLDHGS(0.011)PAQENPESEK	95.209	0.00037926	27350000.0	2222.13	1658.81	3489.2	2069.77	1608.9	1877.3899999999999	1525.5700000000002	2099.4	1864.4099999999999	2725.3	True	False	2124.447825903333	1932.9001575510083	2756.864602739262	1888.3164776252345	1820.4985506851463	2240.1690472181203	1867.7179068851003	2025.5629120487536	1777.7339860419904	2231.721761303057	0.9519322089071315	0.8661026616608457	1.2353083841103851	0.8461254043257994	0.8157372403010463	1.0037850981522585	0.8368955034047693	0.9076234086036193	0.7965751003852772	1.0	11.123941455821019														
RSS(ph)MGPRSLDTCWGRGPER	ddPTM_K562_Methotrexat_30min_R1	1	RSSMGPRSLDTCWGRGPER	19	3	Q17RW3;Q8N2I2	Q17RW3	ZNF619	Zinc finger protein 619	1	RS(0.181)S(0.818)MGPRS(0.001)LDTCWGRGPER	49.356	0.02908	36611000.0	66.655	0.0	101.79	168.86	0.0	0.0	0.0	0.0	0.0	0.0	True	False	63.72492601044345	0.0	80.4256700426543	154.05630597206306	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
RSS(ph)MSMEETEHTC	ddPTM_K562_Methotrexat_30min_R1	2	RSSMSMEETEHTC	13	1	O75030-11;O75030-10;O75030-9;O75030-12;O75030-4;O75030-3;O75030-8;O75030-7;O75030-6;O75030-2;O75030-5;O75030	O75030-11	MITF	Microphthalmia-associated transcription factor	1	RS(0.128)S(0.792)MS(0.08)MEETEHTC;RS(0.269)S(0.724)MS(0.007)MEETEHTC	89.44	0.0062488	9429300.0	3326.6	2807.4	3274.7	3168.8	2698.8999999999996	2938.8	3150.3	3636.4	3532.4	3872.9	True	False	3180.3666471583724	3271.2751323591624	2587.3852214233225	2890.996223879387	3053.852656127879	3506.681507819157	3856.834967953044	3508.5057508688606	3368.1794950116773	3171.4802808316936	1.002801961714972	1.0314663320250248	0.8158288850356032	0.9115605231262065	0.9629108131572656	1.1056923572923998	1.2160993058237215	1.1062675596862879	1.0620212634992015	1.0	11.630940656681595	-8.232705540375447	4.41581224854298	1.1129869790349476	0.9386175998431273	0.5138348006665425	0.07396034576738934	0.1671931576949277	7.982570938798166	0.026728732390703492	0.025747570456970723	5.8518671699472064e-09	8.232705540375447	-0.17436937919182027	
RSS(ph)PAAFINPPIGTVTPALK	ddPTM_K562_Methotrexat_30min_R1	1	RSSPAAFINPPIGTVTPALK	20	1	Q6R954;F8WEE2;Q8WUT1;F8WCX5;F6VRR5;Q9BY77-2;Q9BY77	Q6R954	PDIP46;POLDIP3	Polymerase delta-interacting protein 3	1	RS(0.217)S(0.783)PAAFINPPIGTVTPALK	120.32	1.5238e-07	0.0	981.86	672.98	1169.3	1139.1	741.95	737.49	727.88	894.47	883.34	1101.7	True	False	938.6986100459683	784.1785062958859	923.8799094299607	1039.2368715668426	839.5294298470044	879.9995049685419	891.1256186628779	863.0109831095779	842.2737162053043	902.1714543087284	1.0404880420044194	0.8692122794959719	1.0240624495682653	1.151928346439578	0.9305652776281619	0.9754237964033398	0.987756389771483	0.9565930943479514	0.9336071454961744	1.0	9.817257828105586														
RSS(ph)PSARPPDVPGQQPQAAK	ddPTM_K562_Methotrexat_30min_R1	1	RSSPSARPPDVPGQQPQAAK	20	2	A0A0A6YYC7;Q96JP5-2;Q96JP5	A0A0A6YYC7	ZFP91-CNTF;ZFP91	E3 ubiquitin-protein ligase ZFP91	1	RS(0.336)S(0.429)PS(0.235)ARPPDVPGQQPQAAK	61.523999999999994	0.016075	27395000.0	3200.7	2784.0	4634.0	3629.8	2804.2	2603.8	2096.1	3186.0	3229.5	4387.2	True	False	3060.001060409967	3244.008680091156	3661.3867273569094	3311.581069628059	3173.0014518188136	3106.947498999429	2566.2037826005085	3073.9465741580075	3079.361249898147	3592.6355671627957	0.8517426839445714	0.9029606870626846	1.0191366919657838	0.9217692715332401	0.8831960248961798	0.8648100930128775	0.7142956012727756	0.8556243784519421	0.8571315382066442	1.0	11.810826882091618	-8.0299656005788	2.5396712699440736	0.8406355933112034	0.9286366181262324	0.12279487548881052	0.07559524774921322	0.46174115912497926	5.95154809066973	0.026764318128917493	0.028618423317559757	9.333282245528023e-09	8.0299656005788	0.08800102481502903	
RSS(ph)SFGNFDR	ddPTM_K562_Methotrexat_30min_R1	1	RSSSFGNFDR	10	1	Q9NSI8	Q9NSI8	SAMSN1	SAM domain-containing protein SAMSN-1	1	RS(0.244)S(0.739)S(0.017)FGNFDR	91.09299999999999	0.009426100000000001	26303000.0	1555.0	1323.7	2084.1	1443.9	1422.5	1415.3	1378.2	1741.2	1897.9	1786.9	True	False	1486.644061904427	1542.418925947077	1646.6758909116406	1317.3155287993707	1609.5836834791598	1688.7866945748108	1687.2964329850763	1679.9610090784454	1809.667043251802	1463.275094584975	1.015970317137175	1.0540867753814598	1.1253358285160202	0.9002514521529511	1.0999870697147907	1.154114288437197	1.153095845906979	1.1480828282360183	1.2367237370120574	1.0	10.514985305187592	-7.992576212190975	24.995230373936664	1.1461850197159653	1.0291621327025209	0.3386910953448201	0.07506274638870168	198.5258608034527	668413.0910671618	0.02251215302680422	0.025476961387069424	1.0172408399521333e-08	7.992576212190975	-0.11702288701344443	
RSS(ph)TSSEPTPTVK	ddPTM_K562_Methotrexat_30min_R1	3	RSSTSSEPTPTVK	13	1	F8WAN1;A0A494C1J1;Q69YQ0-2;Q69YQ0	F8WAN1	SPECC1L-ADORA2A;SPECC1L	Cytospin-A	1	RS(0.007)S(0.604)T(0.124)S(0.198)S(0.068)EPTPTVK;RS(0.035)S(0.553)T(0.138)S(0.22)S(0.055)EPTPTVK;RS(0.072)S(0.849)T(0.072)S(0.004)S(0.004)EPTPTVK	102.08	0.0031736	22656200.0	10375.0	8864.1	14298.000000000002	11570.8	8834.1	8798.4	8034.799999999999	9800.1	9561.4	12899.300000000001	True	False	9918.927422674235	10328.74186106179	11297.045193730923	10556.405928825927	9995.938993478567	10498.566278207454	9836.808431104691	9455.424928250439	9116.892600952511	10563.111773227354	0.9390156646656119	0.9778124176665833	1.0694807965928896	0.9993651639265596	0.94630627868709	0.993889537817493	0.9312415358546609	0.8951363131663158	0.8630877715466057	1.0	13.366747278496211	-8.862109938029743	3.524775455666634	0.909609300908217	0.9899035502403072	0.3143374155186339	0.04657140413336303	0.2610380202357789	6.287252714605617	0.021330890257796768	0.013935220588250837	1.373694191755529e-09	8.862109938029743	0.08029424933209017	
RSSEEVDGQHPAQEEVPES(ph)PQTSGPEAENR	ddPTM_K562_Methotrexat_30min_R1	2	RSSEEVDGQHPAQEEVPESPQTSGPEAENR	30	1	Q6JBY9;B7ZKW8	Q6JBY9	RCSD1	CapZ-interacting protein	1	RSSEEVDGQHPAQEEVPES(0.916)PQT(0.062)S(0.023)GPEAENR;RSSEEVDGQHPAQEEVPES(0.721)PQT(0.221)S(0.058)GPEAENR	120.66	2.3108e-15	38372000.0	1097.4499999999998	1241.8	1231.3600000000001	1191.6399999999999	1022.03	948.0899999999999	928.58	1251.07	1243.8200000000002	1230.28	True	False	1049.2074120495265	1446.9863430090502	972.9143635300397	1087.170771340455	1156.4448590693894	1131.29497439372	1136.8377026130333	1207.0691589867736	1185.9950796867358	1007.4643703430543	1.0414337647417329	1.4362655252178627	0.9657059764790988	1.079115850985638	1.1478766824037712	1.1229131348918073	1.1284147966701055	1.1981259035252545	1.1772079634765542	1.0	9.976513102434367	-6.776292573407793	24.999804930107395	1.111947442832107	1.2388498272838802	0.18700792469020333	0.11238811343837352	345.37077009868864	581304.1374159255	0.028049854848000946	0.058778868205172724	1.6738148885952814e-07	6.776292573407793	0.12690238445177315	
RSSS(ph)FGNFDR	ddPTM_K562_Methotrexat_30min_R1	3	RSSSFGNFDR	10	1	Q9NSI8	Q9NSI8	SAMSN1	SAM domain-containing protein SAMSN-1	1	RS(0.043)S(0.295)S(0.662)FGNFDR;RSS(0.088)S(0.912)FGNFDR;RS(0.19)S(0.19)S(0.619)FGNFDR	147.58	1.8674e-07	545048000.0	8074.08	6196.900000000001	8667.64	8401.199999999999	6885.6	7010.42	6682.9400000000005	7766.85	8834.3	9364.1	True	False	7719.153110830412	7220.832395710086	6848.420814308987	7664.67983970446	7791.177090308688	8365.084448089552	8181.759413621601	7493.685483207514	8423.595321249488	7668.170750015766	1.0066485688016977	0.9416629638424834	0.8930970680712745	0.9995447531849367	1.0160411582244264	1.0908839566558104	1.0669766858810203	0.9772455162389422	1.0985143127169108	1.0	12.904666747053946	-7.639405236998354	2.7123106505560965	1.0455920020425182	0.9467807864106438	0.4738928097461892	0.04428727933307977	0.22711634391369512	3.3798992700574617	0.013880893007995264	0.018825456998057166	2.294007127909823e-08	7.639405236998354	-0.09881121563187445	
RST(ph)SPIIGSPPVR	ddPTM_K562_Methotrexat_30min_R1	1	RSTSPIIGSPPVR	13	1	Q86TB9-2;Q86TB9-4;Q86TB9	Q86TB9-2	PATL1	Protein PAT1 homolog 1	1	RS(0.111)T(0.856)S(0.034)PIIGSPPVR	129.17	0.0023385999999999997	106060000.0	3364.6	3344.3	3877.0	3824.5	3654.1	3134.8	3248.2	3815.8	3928.9	4127.2	True	False	3216.696212658288	3896.888731619559	3063.2706823398253	3489.2120229193147	4134.678198805764	3740.5557338748827	3976.691535061766	3681.596151183973	3746.246296555144	3379.7240866143115	0.9517629635502763	1.1530197826069657	0.9063670890982412	1.0323955250485208	1.2233774393541512	1.1067636404668877	1.176632006977077	1.0893185528857967	1.1084473763383453	1.0	11.722689757465067	-7.5483342905309945	24.486186229226636	1.1246411591933714	1.0104359798436255	0.2984795262964577	0.08026197624438074	204.12637322526322	196351.69865579373	0.022504533505130517	0.029054425695075606	2.8292134202294664e-08	7.5483342905309945	-0.11420517934974583	
RSTAPSAAASASASAAAS(ph)SPAGGGAEALELLEHCGVCR	ddPTM_K562_Methotrexat_30min_R1	1	RSTAPSAAASASASAAASSPAGGGAEALELLEHCGVCR	38	1	Q13263;Q13263-2	Q13263	TRIM28	Transcription intermediary factor 1-beta	1	RSTAPSAAASAS(0.002)AS(0.03)AAAS(0.484)S(0.484)PAGGGAEALELLEHCGVCR	90.336	3.0864999999999996e-10	23412000.0	443.46	329.56	388.23	462.01	360.18	290.34	498.13	493.12	361.17	598.07	True	False	423.966029384011	384.0141884378019	306.74582847686094	421.5063006167999	407.54998320950756	346.44409588274596	609.8483327259154	475.7766900969233	344.3792855320373	489.75372758320907	0.8656718785503869	0.7840965097556261	0.6263266846187401	0.8606494996920386	0.8321528969685379	0.7073842961693133	1.2452142748057027	0.9714610901375711	0.703168278537558	1.0	8.93591266286043														
RSVRT(ph)S(ph)CLY(ph)NDPEMS(ph)S(ph)MEK	ddPTM_K562_Methotrexat_30min_R1	1	RSVRTSCLYNDPEMSSMEK	19	2	Q5JUB9	Q5JUB9	PRUNE2		5	RS(0.268)VRT(0.869)S(0.869)CLY(0.994)NDPEMS(1)S(1)MEK	47.568000000000005	0.030805000000000003	0.0	538.5	432.61	679.24	603.22	369.06	349.08	359.68	295.44	373.22	655.41	True	False	514.8281847816937	504.0914493872971	536.6768063638125	550.3366391594686	417.59785885751756	416.5347695486293	440.3473958903442	285.0492077430138	355.86908366217256	536.7088979472485	0.9592316929172555	0.9392269278845508	0.9999402067236844	1.0253913085181598	0.778071428393874	0.7760906725074814	0.8204585345511165	0.5311057983820318	0.6630579165414728	1.0	9.067995996123	-7.846800377986695	4.955489492862365	0.7376208531894756	0.9790127444881676	0.4644939836185962	0.11425693697007952	0.17887736413599137	7.586459355238826	0.03629033307851862	0.041825339203993346	1.4229827060907342e-08	7.846800377986695	0.24139189129869199	
RT(ph)ASNPKVENEDEPVR	ddPTM_K562_Methotrexat_30min_R1	1	RTASNPKVENEDEPVR	16	2	Q9UBF8-2	Q9UBF8-2	PI4KB	Phosphatidylinositol 4-kinase beta	1	RT(0.5)AS(0.5)NPKVENEDEPVR	97.223	0.0025994	8111400.0	984.2	802.7	1417.6	1301.1	945.38	785.9	980.98	1171.5	1103.6	1463.7	True	False	940.9357464478047	935.3325314328918	1120.0651326502284	1187.0345830880685	1069.7140405536236	937.7640523326111	1200.9897364894066	1130.297680987479	1052.2938768811255	1198.6097464570082	0.7850226057556543	0.7803478439898038	0.9344702360055462	0.9903428422777681	0.8924623245519322	0.7823764616503115	1.0019856254626942	0.9430072501317013	0.8779286836200186	1.0	10.227146294959576	-6.759485201595475	24.9066582227587	0.9242105356817849	0.7826851644923862	0.45711780439201755	0.06316871156125647	43.26140176464977	551339.3307643285	0.016697185339429394	0.03985234899103572	1.739861982104386e-07	6.759485201595475	-0.14152537118939867	
RT(ph)ASPPALPK	ddPTM_K562_Methotrexat_30min_R1	1	RTASPPALPK	10	1	Q13029-5;Q13029-3;Q13029-2;Q13029	Q13029-5	PRDM2	PR domain zinc finger protein 2	1	RT(0.633)AS(0.367)PPALPK	80.69	0.026992000000000002	3557800.0	5049.8	3956.7	6578.0	5253.2	4008.6	3845.7	3590.0	4481.9	4483.4	5879.3	True	False	4827.816838459792	4610.477422599377	5197.367693688772	4792.660112119163	4535.801162456635	4588.827097665758	4395.14888580498	4324.269036634899	4274.967712585031	4814.501798418181	1.002765611188677	0.9576229515822723	1.0795234712335933	0.9954633548363833	0.9421122584162054	0.9531260532862259	0.9128979632428466	0.8981758066962713	0.8879356352072783	1.0	12.233170801289862	-7.812969317484054	2.7022148380834454	0.9243604758472114	1.0119617676052823	0.46426773999397486	0.04041701522060741	0.23549496106442194	3.5108855846634	0.013416600415308197	0.01634557371864793	1.5382633133887115e-08	7.812969317484054	0.08760129175807096	
RT(ph)FSLTEVR	ddPTM_K562_Methotrexat_30min_R1	1	RTFSLTEVR	9	1	O95239;O95239-2	O95239	KIF4A	Chromosome-associated kinesin KIF4A	1	RT(0.998)FS(0.002)LTEVR	80.014	0.0099194	0.0	1324.4	1155.3	1230.8	1070.7	1139.4	954.82	1311.9	1139.1	1038.4	1281.4	True	False	1266.1809617917827	1346.1936882576545	972.4718998771878	976.833393368991	1289.25107132243	1139.325451645532	1606.1269702750853	1099.037207351974	990.1250106500198	1049.3260429801255	1.206661142418405	1.2829126821577912	0.9267585669705966	0.9309150381846497	1.228646787094799	1.0857687744123883	1.5306271878220274	1.0473743739654713	0.9435818516788428	1.0	10.035247301476652	-9.513323534201515	24.97599673809815	0.9796865657180097	1.1646383497383745	0.19603993351481375	0.16521186875712607	830.626496271121	2171172.778089049	0.1062061767314163	0.04503020499925772	3.0667365257356704e-10	9.513323534201515	0.18495178402036483	
RT(ph)MMS(ph)FK	ddPTM_K562_Methotrexat_30min_R1	1	RTMMSFK	7	1	A0A0D9SF16;A0A1B0GW10;E9PHH0;Q9P267	A0A0D9SF16	MBD5	Methyl-CpG-binding domain protein 5	2	RT(1)MMS(1)FK	57.55	0.023572	2564800.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
RT(ph)NSDSALHQSTMTPTQPESFSSGSQDVHQKR	ddPTM_K562_Methotrexat_30min_R1	1	RTNSDSALHQSTMTPTQPESFSSGSQDVHQKR	32	2	M0QXN6;M0QX46;Q6UUV9-3;Q6UUV9;Q6UUV9-2	M0QXN6	CRTC1	CREB-regulated transcription coactivator 1	1	RT(0.6)NS(0.204)DS(0.156)ALHQS(0.012)T(0.012)MT(0.012)PT(0.003)QPESFSSGSQDVHQKR	51.463	0.0017070999999999998	20381000.0	1493.1	1289.8	2278.2	1727.9	1000.4	1266.5	1089.2	1323.9	1669.0	1861.8	True	False	1427.465111787459	1502.9175271485533	1800.0369534450836	1576.417689737816	1131.9701349402824	1511.2332005080184	1333.4808263004968	1277.337686606336	1591.4085542901405	1524.6099787891367	0.9362821519252869	0.9857718026627297	1.1806540547994406	1.0339809601599392	0.7424653850418232	0.9912260981711911	0.8746373465032434	0.837812754984598	1.0438135499769299	1.0	10.574224508562269	-7.570075944817371	24.999996726361783	0.9068174888611472	1.0423783389375316	0.24907494723769452	0.10048154946624044	149.6269830929583	79255.35788962494	0.029253672740868777	0.03776634069369658	2.6910641779891527e-08	7.570075944817371	0.1355608500763844	
RT(ph)PS(ph)RASLTRTPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	RTPSRASLTRTPSR	14	3	A8MUU9	A8MUU9		Putative uncharacterized protein ENSP00000383309	3	RT(0.988)PS(0.993)RAS(0.015)LT(0.005)RT(0.066)PS(0.934)R	82.029	0.027623	61228000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	60.867	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	49.8433964867109	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	5.639330476402899														
RT(ph)SFSFQK	ddPTM_K562_Methotrexat_30min_R1	2	RTSFSFQK	8	1	H0Y7F8;Q9BPZ7-4;Q9BPZ7-3;Q9BPZ7-2;Q9BPZ7	H0Y7F8	MAPKAP1	Target of rapamycin complex 2 subunit MAPKAP1	1	RT(0.746)S(0.252)FS(0.002)FQK;RT(0.818)S(0.18)FS(0.002)FQK	84.81700000000001	0.025731999999999998	34842000.0	5155.5	4320.8	8173.4	5651.0	4953.6	5211.5	5256.3	5641.1	5553.1	6926.2	True	False	4928.8703930214	5034.738758957567	6457.915036119758	5155.585603743507	5605.085226349647	6218.5486178030305	6435.159077564547	5442.699315594086	5294.937593066853	5671.798063749766	0.8690137303236077	0.8876794805400701	1.1386010156804263	0.9089861003152538	0.9882377974937964	1.096398099492949	1.1345888914299789	0.9596073863031336	0.9335553793616973	1.0	12.469590453062336	-6.622662777613894	9.885583726793383	1.0202033882085522	0.8737527116764185	0.35766471516787124	0.07610233586827285	0.31203956101465474	27.718507092778985	0.020062624441884554	0.053206775134521614	2.384170018864595e-07	6.622662777613894	-0.14645067653213362	
RT(ph)SPQVLGSILK	ddPTM_K562_Methotrexat_30min_R1	1	RTSPQVLGSILK	12	1	Q7Z417	Q7Z417	NUFIP2	Nuclear fragile X mental retardation-interacting protein 2	1	RT(0.653)S(0.347)PQVLGSILK	104.78	0.0039563	114670000.0	10549.0	7975.9	12332.0	11548.0	8570.2	7289.0	7535.5	10673.0	9945.5	12816.0	True	False	10085.278591015944	9293.781907880404	9743.681726751274	10535.604769426653	9697.331517858076	8697.49609040896	9225.52769609566	10297.624540486018	9483.135875789449	10494.898210420868	0.9609696434217728	0.8855523628282721	0.9284207937411268	1.0038786997443543	0.9240043422459446	0.8287356309728489	0.8790488017249379	0.981202898210202	0.9035948406220087	1.0	13.357400553608466	-11.102449037966656	1.034393703971827	1.0008226488635452	0.9203496085137209	0.1842091255923064	0.04905575055418057	22.948924178441974	19.349856281395997	0.13089701868230685	0.015860787950989302	7.898615298037577e-12	11.102449037966656	-0.08047304034982428	
RT(ph)SPSDGAMANYESTEVMGDGESAHDSPR	ddPTM_K562_Methotrexat_30min_R1	1	RTSPSDGAMANYESTEVMGDGESAHDSPR	29	1	Q14C86-4;Q14C86-2;Q14C86-6;F8W9S7;Q14C86-3	Q14C86-4	GAPVD1	GTPase-activating protein and VPS9 domain-containing protein 1	1	RT(0.333)S(0.333)PS(0.333)DGAMANYESTEVMGDGESAHDSPR	82.831	0.0015704	60844000.0	1142.1	964.84	1223.4	1018.2	1270.9	818.68	860.51	1445.7	1216.3	1263.7	True	False	1091.894651511927	1124.26341052412	966.6250587502041	928.935986857483	1438.0456262451073	976.8783234045825	1053.501272346531	1394.8539115694396	1159.7544784799873	1034.8316844966328	1.0551422689024552	1.0864215189458457	0.9340891598428337	0.8976686747945296	1.3896420527021336	0.9439973070400911	1.0180411830538216	1.347904139838867	1.1207179832767877	1.0	10.015180416938437														
RT(ph)SSEDNLYLAVLR	ddPTM_K562_Methotrexat_30min_R1	1	RTSSEDNLYLAVLR	14	1	Q15149-4	Q15149-4	PLEC	Plectin	1	RT(0.694)S(0.2)S(0.105)EDNLYLAVLR	114.54	0.0014130999999999998	15661000.0	1182.7	1172.7	1356.6	1295.5	1171.3	1110.6	940.38	1470.9	1174.3	1518.1	True	False	1130.7099241249946	1366.4687425082248	1071.868199035905	1181.925526393507	1325.3464804633684	1325.2077319259417	1151.2841529897737	1419.1676132859434	1119.707049312709	1243.1573793102307	0.909546886776614	1.0991920775681787	0.8622144041252718	0.950744890441226	1.066113190912916	1.0660015811201933	0.9260968660529264	1.1415832274376816	0.9006961370683264	1.0	10.279793232683955	-7.738552923921702	24.856311872352574	1.0217577415396248	0.9590357766259373	0.10639820375015152	0.08608103564009108	506.87866365065	550503.7408752659	0.02423203521683966	0.03126131373768797	1.82577424332151e-08	7.738552923921702	-0.06272196491368753	
RT(ph)SSLDTLAAPYLAGHWPR	ddPTM_K562_Methotrexat_30min_R1	1	RTSSLDTLAAPYLAGHWPR	19	1	Q6P1L5-2;Q6P1L5	Q6P1L5-2	FAM117B	Protein FAM117B	1	RT(0.459)S(0.27)S(0.27)LDT(0.002)LAAPYLAGHWPR	99.39200000000001	0.00068664	9725300.0	566.46	753.0	575.62	633.22	571.1	424.06	568.23	881.33	801.14	916.3	True	False	541.5590966600523	877.4204511884479	454.80522831272856	577.7065857374735	646.2096602003156	506.0035933734154	695.6700421673995	850.333124357401	763.8951762636332	750.3491908714608	0.72174276090187	1.1693495000233234	0.6061247667696084	0.7699169836733228	0.8612119104837085	0.6743574851939792	0.9271283965262139	1.1332498717961141	1.0180529086416952	1.0	9.551418330315238	-9.004400386509305	7.716493279994187	1.0520760049339528	0.8087985551038848	0.3738013498737628	0.14541767112744192	0.13622902999762174	63.22816175200347	0.06352675400177255	0.0400603769087252	9.899188940815156e-10	9.004400386509305	-0.24327744983006805	
RTAFYNEDDS(ph)EEEQR	ddPTM_K562_Methotrexat_30min_R1	2	RTAFYNEDDSEEEQR	15	1	Q8WWQ0	Q8WWQ0	PHIP	PH-interacting protein	1	RTAFYNEDDS(1)EEEQR;RTAFYNEDDS(1)EEEQR	187.56	9.481399999999998e-83	9983300.0	2187.67	2187.51	3082.8	2286.2	2347.35	2064.65	2054.74	2456.1000000000004	2260.7	2631.8	True	False	2091.5026462420947	2548.9588461875724	2435.762408954659	2085.772395554487	2656.067669184398	2463.614391969111	2515.5677497545744	2369.7175708692694	2155.600550439618	2155.1555173365805	0.9704648362577795	1.1827261771520174	1.1302026184935658	0.9678059790934068	1.232425060659596	1.1431260399313248	1.1672325869380435	1.0995575733661451	1.0002064969787365	1.0	11.073576263486872	-12.63226135384037	7.04544017427285	0.9997280659634064	1.1060093571248808	0.09994324106459407	0.08734186169723697	0.0003662095241153436	1.911445908440632e-05	0.08301213353143648	0.02008227371842534	2.3320542342679755e-13	12.63226135384037	0.10628129116147444	
RTAQEVETYRR	ddPTM_K562_Methotrexat_30min_R1	1	RTAQEVETYRR	11	2	J3KTA4;P17844-2;P17844;J3QR02;J3KRX8;J3KTQ4;J3QRQ7	J3KTA4	DDX5	Probable ATP-dependent RNA helicase DDX5	0		114.89	0.0062451	12124000.0	1335.7	993.12	1227.6	950.28	1123.4	911.61	925.23	1346.0	1306.7	1573.6	False	True	1276.9842273220208	1157.2161998463102	969.9435361465994	866.9704278048799	1271.146790875563	1087.7657306870224	1132.7363798365861	1298.660417079937	1245.9518022114607	1288.6057915042354	0.9909812882583368	0.8980374040500397	0.7527077268637368	0.6727972460785191	0.9864512477409466	0.8441415814352616	0.8790402676324329	1.0078027164257615	0.9668991171900732	1.0	10.331595268590924	-9.170665925479321	4.089995431021859	0.9907684023259032	0.8527147938169769	0.30388280908265286	0.09091113496856253	0.30575274466620844	9.198435233726444	0.04928559934234843	0.026859037987325578	6.750470978907934e-10	9.170665925479321	-0.13805360850892634	
RTATYNGPPAS(ph)PSLSHEATPLSQTR	ddPTM_K562_Methotrexat_30min_R1	4	RTATYNGPPASPSLSHEATPLSQTR	25	1	J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;P27448-6;P27448-7;H0YIY6;A2SY06	J3KNR0;P27448-6	MARK3	MAP/microtubule affinity-regulating kinase 3	1	RT(0.002)AT(0.006)Y(0.005)NGPPAS(0.948)PS(0.029)LS(0.009)HEATPLSQTR;RT(0.003)AT(0.003)Y(0.003)NGPPAS(0.734)PS(0.239)LS(0.018)HEAT(0.001)PLSQTR;RTATYNGPPAS(1)PSLSHEATPLSQTR;RTATYNGPPAS(1)PSLSHEATPLSQTR	141.72	3.7281999999999996e-17	86674700.0	1784.3000000000002	1842.1399999999999	2538.24	2245.47	2217.03	1686.16	1967.25	2124.86	1913.81	2846.04	True	False	1705.864308460494	2146.5223239738207	2005.4981111019436	2048.613131417081	2508.6083049446784	2011.9865561536521	2408.4558901392343	2050.1274694178865	1824.8373908244546	2330.5945773085346	0.7319438245799471	0.9210191874953695	0.860509215385704	0.8790087951645811	1.0763812502480468	0.8632932453130377	1.033408347204093	0.8796585598278776	0.7829922066204458	1.0	11.186482344393877	-5.517000900621378	1.2242305608383073	0.9275153330634067	9.256978235080933e-19	0.303701699822134	0.0854910478019921	10.20937474887966	3.451042565752182	0.025019061236231967	18.6667711238699	3.040878719625118e-06	5.517000900621378	-0.9275153330634067	
RTDALTS(ph)SPGR	ddPTM_K562_Methotrexat_30min_R1	1	RTDALTSSPGR	11	1	P49736;F8WDM3;C9JZ21;C9J013	P49736	MCM2	DNA replication licensing factor MCM2	1	RTDALT(0.117)S(0.666)S(0.217)PGR	87.363	0.013777000000000001	11065000.0	1502.6	1382.9	1863.3	1201.8	1654.4	1278.0	1229.7	1564.7	1538.5	1619.5	True	False	1436.5475031624378	1611.4007197191304	1472.2187935011073	1096.4400599148726	1871.9825982059217	1524.9554127510844	1505.491527820164	1509.668614119597	1466.9754708061002	1326.1928567241403	1.0832116127596156	1.2150576076088124	1.1101091263134	0.826757627561963	1.4115462835699095	1.1498745488027375	1.1351980371383643	1.1383477195380651	1.1061554610011326	1.0	10.373074873994941	-10.217870843928662	2.5067420189851584	1.0000237384335584	1.1352892178486478	0.08107651707347696	0.13470801167571633	2.741324994657538	26.603360050842415	0.1286522861120929	0.034811211933854905	6.055209255701542e-11	10.217870843928662	0.13526547941508937	
RTDALTS(ph)SPGRDLPPFEDESEGLLGTEGPLEEEEDGEELIGDGMERDYR	ddPTM_K562_Methotrexat_30min_R1	1	RTDALTSSPGRDLPPFEDESEGLLGTEGPLEEEEDGEELIGDGMERDYR	49	3	P49736;F8WDM3;C9JZ21;C9J013	P49736	MCM2	DNA replication licensing factor MCM2	1	RT(0.044)DALT(0.154)S(0.4)S(0.4)PGRDLPPFEDES(0.003)EGLLGTEGPLEEEEDGEELIGDGMERDYR	52.095	2.8455e-06	44247000.0	144.24	129.37	170.55	255.26	210.67	115.94	214.3	0.0	155.25	192.53	True	False	137.89938230809938	150.74619358598875	134.75388570365155	232.88175211671688	238.37679760882588	138.34376412704273	262.3622301470775	0.0	148.03246138618593	157.66095134615554	0.8746578092461952	0.9561415956130763	0.854706790445467	1.4771048260733177	1.5119583864837471	0.8774764007563256	1.6640913803129544	0.0	0.938929139537985	1.0	7.300681574854971	-9.254937419478999	24.999789649402544	0.6020984276743339	1.1663768874187688	0.2910255138359946	0.3752202366547343	599.6383747789537	2305597.129594676	0.17738771817622098	0.09928582154919827	5.559843671637953e-10	9.254937419478999	0.5642784597444349	
RTDALTSS(ph)PGR	ddPTM_K562_Methotrexat_30min_R1	1	RTDALTSSPGR	11	1	P49736;F8WDM3;C9JZ21;C9J013	P49736	MCM2	DNA replication licensing factor MCM2	1	RT(0.004)DALT(0.006)S(0.208)S(0.782)PGR	79.639	0.022132	11868000.0	1641.2	1698.2	2054.2	1651.7	2260.7	1654.5	1906.5	2206.9	2163.1	2112.6	True	False	1569.0548131173935	1978.7986855354873	1623.0514923039643	1506.8980254296848	2558.0216753893433	1974.208709230569	2334.0811562081326	2129.2820761171715	2062.53795313661	1729.9876684874462	0.9069745650205943	1.1438224223098539	0.9381867407893273	0.8710455299066889	1.478635785667686	1.1411692379036718	1.3491894761590146	1.2308076611776282	1.1922269682649922	1.0	10.75654603889668	-7.74329710211591	24.99999915477501	1.2448627473747795	0.9758640527967852	0.4788993175609768	0.13585822742310774	205.66579816118357	283405.71868225693	0.0381806136765995	0.04919176779110772	1.8059382557241766e-08	7.74329710211591	-0.2689986945779943	
RTDLCDHALHISHDEL	ddPTM_K562_Methotrexat_30min_R1	2	RTDLCDHALHISHDEL	16	1	Q9Y2B0;H0YI18	Q9Y2B0	CNPY2	Protein canopy homolog 2	0	;	85.837	0.0055306	36644000.0	6330.1	4256.5	4595.0	6676.2	4859.6	4101.0	4749.6	8237.0	7949.4	10237.099999999999	False	True	6051.836383447723	4959.814276870687	3630.572294390377	6090.907911469187	5498.722578724308	4893.460209461813	5814.818704183659	7947.300041223958	7579.834129103679	8383.061990472803	0.7219123979192239	0.5916470953581668	0.433084271417348	0.7265731684188179	0.6559324725229881	0.5837318410651313	0.6936389962035464	0.9480187609558322	0.9041844301900692	1.0	13.033261582477227	-9.181165571257846	3.1231305535848577	0.9510691424599838	0.6162509451298247	0.7714676607039405	0.08087142565026133	0.12599378417614202	2.3740676988885117	0.04632317283415365	0.023490515378014845	6.589226384272382e-10	9.181165571257846	-0.33481819733015905	
RTEARSS(ph)DEENGPPS(ph)S(ph)PDLDR	ddPTM_K562_Methotrexat_30min_R1	1	RTEARSSDEENGPPSSPDLDR	21	2	Q96B36;Q96B36-3;Q96B36-2	Q96B36	AKT1S1	Proline-rich AKT1 substrate 1	3	RT(0.018)EARS(0.279)S(0.716)DEENGPPS(0.994)S(0.993)PDLDR	62.468	0.020984	16574000.0	1328.9	1056.6	1531.3	1336.4	1033.6	861.49	949.81	1222.4	1459.2	1537.9	True	False	1270.4831471799314	1231.1851908708027	1209.9010564526618	1219.2398868948542	1169.5365168675294	1027.9607500242028	1162.8290705366103	1179.407499137084	1391.3621104974077	1259.3714074443076	1.0088232428256994	0.9776188212572617	0.9607182196616343	0.9681336893054497	0.9286668809171365	0.8162490778715425	0.9233408537489235	0.9365049040858426	1.1048068125676713	1.0	10.298488102793273	-9.744651274816254	24.806786615938577	1.0524033815752527	0.9378297963866664	0.41333348221339716	0.05351186523930572	193.37623326165482	285743.57397749106	0.03916826296321167	0.014714439417275934	1.8003159335206767e-10	9.744651274816254	-0.11457358518858629	
RTES(ph)VPSDINNPVDR	ddPTM_K562_Methotrexat_30min_R1	4	RTESVPSDINNPVDR	15	1	A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87	A0A2R8Y4X0	KSR1	Kinase suppressor of Ras 1	1	RT(0.023)ES(0.977)VPSDINNPVDR;RT(0.002)ES(0.998)VPSDINNPVDR;RT(0.031)ES(0.969)VPSDINNPVDR;RT(0.068)ES(0.932)VPSDINNPVDR	159.4	2.2684999999999998e-09	276109000.0	4672.8	3856.8600000000006	4542.5	4586.49	4176.29	3583.78	3610.14	4285.41	4629.62	5372.84	True	False	4467.389307052739	4494.1405595892165	3589.0913269354264	4184.399542685107	4725.5453367150685	4276.294764561096	4419.805793481895	4134.689701306488	4414.38997670025	4399.766612115918	1.0153696095494256	1.02144976217907	0.8157458436663246	0.9510503423436731	1.0740445467498283	0.9719367279130647	1.0045546009896966	0.939752051829415	1.0033236682473254	1.0	12.103211281940835	-7.559372449412301	24.99959439812251	0.9964624250899875	0.9454949404505015	0.1263116884939386	0.061194827156657666	366.3151989395313	250938.11990298334	0.018819851570546914	0.024296420639076274	2.758211409283738e-08	7.559372449412301	-0.05096748463948597	
RTFS(ph)LTEVR	ddPTM_K562_Methotrexat_30min_R1	1	RTFSLTEVR	9	1	O95239;O95239-2	O95239	KIF4A	Chromosome-associated kinesin KIF4A	1	RT(0.281)FS(0.439)LT(0.281)EVR	79.23	0.027565	48649000.0	2104.9	2281.8	2687.9	2598.8	2102.8	2017.0	2222.8	2137.6	2370.9	2103.5	True	False	2012.3711163360942	2658.8286660316066	2123.746522326854	2370.9672388972963	2379.355057729336	2406.7567038489337	2721.3194828321202	2062.4193963967864	2260.677376492807	1722.53576666825	1.1682608601088424	1.5435549829971575	1.2329186792066622	1.376440062828565	1.3813095227227203	1.397217259821613	1.5798333686247514	1.1973158620595399	1.3124124446283267	1.0	10.750318223968545	-10.241467896973667	1.2884223991313497	1.0029624766423453	1.3769075124578904	0.4235796120500419	0.12670219852699494	0.7806992857524541	2.396438583762982	0.11461036764179297	0.03464343949254722	5.734982579416404e-11	10.241467896973667	0.37394503581554517	
RTIQEVLEEQS(ph)EDEDREAK	ddPTM_K562_Methotrexat_30min_R1	1	RTIQEVLEEQSEDEDREAK	19	2	P18858-3;P18858;M0R0Q7;P18858-2	P18858-3	LIG1	DNA ligase 1;DNA ligase	1	RTIQEVLEEQS(1)EDEDREAK	81.696	0.018634	31940000.0	761.63	408.85	741.33	608.34	533.4	423.8	317.8	644.49	611.32	790.43	True	False	728.1496571500123	476.4055132382431	585.7349638738667	555.0077767087815	603.5514493973878	505.69335205313735	389.0747398074714	621.8229213995903	582.8998666319044	647.275467576698	1.1249455504255323	0.7360166375868279	0.9049237816269637	0.8574522046797898	0.932449134302886	0.7812645116095273	0.601096070061343	0.9606774125514161	0.9005437342066953	1.0	9.338236015019888	-6.246634916247713	24.339612523702925	0.8456604268206448	1.1249458370758085	0.34242521565839534	0.11279432160440309	2152.3680068680173	3538567.7846073736	0.028196040138991952	0.6002327196920839	5.667154905270739e-07	6.246634916247713	0.27928541025516374	
RTLEGELHDLR	ddPTM_K562_Methotrexat_30min_R1	1	RTLEGELHDLR	11	1	P02545-3;P02545;P02545-5;P02545-4;P02545-6;H0YAB0;Q3BDU5;P02545-2;Q5TCI8	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	0		116.01	0.00085728	13056000.0	3268.0	2385.6	2986.6	2514.4	2924.4	2696.6	2303.4	3350.1	2895.8	3020.1	False	True	3124.3426329927115	2779.7798517332812	2359.7534743038736	2293.966455857842	3309.0098586758913	3217.679785621729	2819.9960845579935	3232.2750841452444	2761.174890061946	2473.1306246326512	1.263314845513584	1.1239923294169625	0.9541564245739675	0.927555719463293	1.3379842640408037	1.3010553318831148	1.1402535945616963	1.3069568796534365	1.1164694911624733	1.0	11.272122725980267	-7.764936902153487	24.999996638913448	1.217821209932386	1.0632290589454911	0.1959038402360852	0.12925862054809387	134.4749879226642	961217.6479352018	0.040217720359582675	0.047435794798600904	1.718157997039791e-08	7.764936902153487	-0.15459215098689483	
RTNPPGGKGS(ph)GIFDESTPVQTR	ddPTM_K562_Methotrexat_30min_R1	2	RTNPPGGKGSGIFDESTPVQTR	22	2	H3BU16;A6NGP5;Q9H910-2;Q9H910;Q9H910-3;H3BMT0;H3BTV5;H3BMV3	H3BU16	HN1L	Hematological and neurological expressed 1-like protein	1	RTNPPGGKGS(0.985)GIFDES(0.008)T(0.005)PVQT(0.002)R;RT(0.004)NPPGGKGS(0.987)GIFDES(0.005)T(0.004)PVQTR	73.346	0.012886000000000002	21325100.0	2070.56	1621.0100000000002	2613.88	2529.79	1652.43	1584.1499999999999	1769.12	2059.19	2453.2200000000003	3036.37	True	False	1979.5406616185405	1888.8543500411502	2065.262308783704	2308.00723845236	1869.7535086759008	1890.2645673784264	2165.8901941101144	1986.7671205399977	2339.1703376606715	2486.4539699731286	0.7961300251377401	0.7596578793942296	0.8306054862564071	0.9282324411890492	0.751975918820692	0.760225039435922	0.8710759259032338	0.7990363564065772	0.9407655906398907	1.0	11.279874008420428	-9.890801603234712	3.4652726685402833	0.998903545970733	0.8127742963105151	0.6045948621734439	0.05208913783826339	0.15142126659221453	3.361824591986869	0.05167005443150724	0.013804718663400837	1.2858739457135063e-10	9.890801603234712	-0.18612924966021793	
RTNSDSALHQS(ph)TMTPTQPESFSSGSQDVHQK	ddPTM_K562_Methotrexat_30min_R1	1	RTNSDSALHQSTMTPTQPESFSSGSQDVHQK	31	1	M0QXN6;M0QX46;Q6UUV9-3;Q6UUV9;Q6UUV9-2	M0QXN6	CRTC1	CREB-regulated transcription coactivator 1	1	RT(0.005)NS(0.004)DS(0.004)ALHQS(0.314)T(0.314)MT(0.314)PT(0.043)QPESFSSGSQDVHQK	88.001	5.651e-07	12608000.0	2152.0	1768.6	2953.4	2215.7	1653.9	1472.9	1549.6	2119.8	2063.4	2887.3	True	False	2057.4006567320416	2060.831088940091	2333.5217005990294	2021.4530210961743	1871.4168394419578	1757.5170793748605	1897.137246084512	2045.2454324859227	1967.472984375241	2364.381991490961	0.8701642391696025	0.8716151181817059	0.9869478404915141	0.8549604202582602	0.7915035921339668	0.7433304287124027	0.8023818709971615	0.8650232660570244	0.8321299144790761	1.0	11.207247422000465	-7.512270139871979	24.261644184446865	0.8254684827948474	0.9083087538530942	0.15218109143227998	0.07034842163704742	520.1327798200305	1189533.1130909503	0.019949000197409708	0.027554202590512455	3.0741840158313654e-08	7.512270139871979	0.08284027105824676	
RTPAPPEPGS(ph)PAPGEGPSGR	ddPTM_K562_Methotrexat_30min_R1	3	RTPAPPEPGSPAPGEGPSGR	20	1	P0C1Z6-2;P0C1Z6	P0C1Z6-2	TFPT	TCF3 fusion partner	1	RTPAPPEPGS(1)PAPGEGPSGR;RTPAPPEPGS(1)PAPGEGPSGR;RTPAPPEPGS(0.986)PAPGEGPS(0.014)GR	236.6	1.9178e-57	183918000.0	6242.4	5713.799999999999	7495.3	6254.0	5730.9	5446.18	6042.1	6453.299999999999	6643.5	7130.1	True	False	5967.991570438709	6657.908332006044	5922.138959334974	5705.7215299614045	6484.6138008089465	6498.577206429341	7397.194730619021	6226.333781234738	6334.645135066836	5838.769797918368	1.0221316779035219	1.1402930004844025	1.0142785491297035	0.9772129622228989	1.1106130272717438	1.113004525156345	1.2669098091958106	1.066377678300409	1.0849280506529402	1.0	12.511448716541159	-7.954190665667749	19.110526922702114	1.1194758953783583	1.0440072496167054	0.1570548021626671	0.07427035777582058	20.9780254804627	8749.987999146222	0.023427393732937438	0.026563946736179914	1.1112437575789308e-08	7.954190665667749	-0.07546864576165291	
RTPDYFL	ddPTM_K562_Methotrexat_30min_R1	1	RTPDYFL	7	1	H0YBN9;P67775-2;P67775;P62714	H0YBN9	PPP2CB;PPP2CA	Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform	0		50.038999999999994	0.03354	0.0	3228.2	3231.0	4060.5	3808.6	2910.2	3029.7	2844.7	3279.6	2993.7	4112.0	False	True	3086.2921933375383	3764.8678323902723	3208.256540015696	3474.705951232971	3292.9423097793	3615.146646331734	3482.6963887045777	3164.254609105022	2854.523540430434	3367.276953905323	0.9165543065170502	1.1180748966977097	0.9527747743751231	1.0319038198515431	0.9779244044539281	1.0736113173402428	1.034276786964432	0.9397072626993636	0.8477246093820099	1.0	11.717366670393634	-9.365136559043464	4.800187604116114	0.9156137987952572	1.0178936579708027	0.26898335473024204	0.06449537187016001	0.25796869065413597	9.385991661728468	0.0346169230414458	0.015876688513313073	4.3138341180968414e-10	9.365136559043464	0.1022798591755455	
RTPTMPQEEAAEK	ddPTM_K562_Methotrexat_30min_R1	1	RTPTMPQEEAAEK	13	1	Q9NYV4-2	Q9NYV4-2	CDK12	Cyclin-dependent kinase 12	0		54.005	0.031208	6291100.0	180.0	60.416000000000004	174.76	177.42	207.3	180.0	196.24	202.46	205.75	137.74	False	True	172.08741552591437	70.39871710358737	138.0802642367056	161.86586406232038	234.56358353970472	214.78245250015263	240.25181541793032	195.33936704457957	196.18472740874566	112.7939512721106	1.5256794676051448	0.6241355702998068	1.2241814625643608	1.4350580171788279	2.079575907167487	1.9042018661266606	2.130006198987861	1.731824843810389	1.7393195751734802	1.0	6.81754589311684	-7.436837338927138	2.8181822142437984	1.823929326967086	1.068607853731352	0.375859900935553	0.3611531539128531	0.2359374645572323	3.6448139237108004	0.10339462699907563	0.16052942853508337	3.657317474841163e-08	7.436837338927138	-0.7553214732357341	
RTRSEGGGT(ph)GESSQGGT(ph)SKR	ddPTM_K562_Methotrexat_30min_R1	1	RTRSEGGGTGESSQGGTSKR	20	3	F5H0R1;Q9H6E5	F5H0R1	TUT1	Speckle targeted PIP5K1A-regulated poly(A) polymerase	2	RT(0.167)RS(0.209)EGGGT(0.603)GES(0.008)S(0.018)QGGT(0.529)S(0.468)KR	50.285	0.025536	41362000.0	4176.9	3927.4	4496.9	4807.4	3548.9	4511.5	3702.1	4468.0	4719.2	4746.9	True	False	3993.288477278843	4576.336095614224	3553.062143774555	4385.942705970007	4015.6425548676207	5383.283524746882	4532.39016438402	4310.857907513491	4499.805422052745	3887.1904115985335	1.0272942805589702	1.1772863202068593	0.9140437610601703	1.1283066280682585	1.0330449835659745	1.384877753527157	1.1659810002773083	1.1089906721962541	1.1575984054257544	1.0	11.92451206358712														
RTRSEGGGTGESS(ph)QGGTS(ph)KR	ddPTM_K562_Methotrexat_30min_R1	1	RTRSEGGGTGESSQGGTSKR	20	3	F5H0R1;Q9H6E5	F5H0R1	TUT1	Speckle targeted PIP5K1A-regulated poly(A) polymerase	2	RTRSEGGGTGES(0.451)S(0.528)QGGT(0.116)S(0.904)KR	61.736000000000004	0.017293	34822000.0	1199.3	1143.1	1131.0	1168.6	1106.6	1002.1	886.23	1369.7	1148.1	1291.7	True	False	1146.580208001273	1331.9778456221984	893.6185560294916	1066.1506523685473	1252.137296406354	1195.7416425022388	1084.9896370660028	1321.5268746466488	1094.725081594074	1057.760613171085	1.0839694669325166	1.2592431870090448	0.8448211673816176	1.0079318884566042	1.1837624513665173	1.1304463671770661	1.0257421419892798	1.2493629070615637	1.0349459678898163	1.0	10.046797445886936	-7.745046171788081	24.995585235377177	1.1139165656743295	1.0494258336285371	0.04581637075122125	0.11801986351119245	786.9628660081277	1199919.0831323175	0.03528348160540018	0.0454245678054469	1.7986796792848837e-08	7.745046171788081	-0.06449073204579236	
RTS(ph)DPSAAVNHVSSTTSLGENYEDDDLVNSDEVMK	ddPTM_K562_Methotrexat_30min_R1	1	RTSDPSAAVNHVSSTTSLGENYEDDDLVNSDEVMK	35	1	H7C3A2;Q8NHH9-2;Q8NHH9	H7C3A2	ATL2	Atlastin-2	1	RT(0.096)S(0.369)DPS(0.323)AAVNHVS(0.014)S(0.014)T(0.014)T(0.014)S(0.038)LGENY(0.116)EDDDLVNS(0.002)DEVMK	49.586999999999996	0.0013593	28991000.0	454.77	341.14	583.95	334.36	354.4	303.8	240.31	499.86	431.94	526.52	True	False	434.77885532622275	397.50758661145693	461.3868751489141	305.0471779273895	401.0098118980771	362.50505038636857	294.2056347486895	482.2796404766548	411.8592036788996	431.1621259168847	1.008388328176198	0.9219445835279249	1.0701006591609947	0.7074999393295356	0.930067340783499	0.8407627400377203	0.6823550053777303	1.1185575250865705	0.9552304781016268	1.0	8.752086644415025	-9.295778497723337	24.999650861468357	1.027670474111974	0.8828357072746817	0.23599972883433407	0.11898359299534109	981.6673366287605	714670.3696447609	0.06547980458845636	0.031457720612587496	5.060827124639164e-10	9.295778497723337	-0.14483476683729224	
RTS(ph)FSTSDVSK	ddPTM_K562_Methotrexat_30min_R1	1	RTSFSTSDVSK	11	1	M0R300;M0R0P8;Q13459-2;Q13459	M0R300	MYO9B	Unconventional myosin-IXb	1	RT(0.03)S(0.968)FSTSDVS(0.001)K	102.33	0.0045074	25728000.0	2995.0	2365.1	4840.4	2992.6	2613.9	2928.2	2255.4	3178.5	3680.4	5049.9	True	False	2863.3433861117405	2755.8925751737042	3824.4661879798005	2730.2434043112407	2957.673666253906	3494.0332078385914	2761.2308626865056	3066.7103534090497	3509.2990073154197	4135.314175468503	0.6924125385920269	0.6664288269854323	0.9248308654919827	0.6602263548698625	0.7152234487525538	0.8449256959884411	0.6677197295109208	0.741590656304031	0.8486172654385661	1.0	12.013781225224786	-10.040649436220866	2.691804554210909	0.9993582109594898	0.7405474677542822	0.5034191362700815	0.08076221488213177	0.24177557280571738	4.18203541287622	0.07604448751051905	0.020529487986130343	9.106480538126305e-11	10.040649436220866	-0.2588107432052077	
RTS(ph)PQVLGSILK	ddPTM_K562_Methotrexat_30min_R1	1	RTSPQVLGSILK	12	1	Q7Z417	Q7Z417	NUFIP2	Nuclear fragile X mental retardation-interacting protein 2	1	RT(0.217)S(0.783)PQVLGSILK	152.25	1.1769000000000001e-08	115970000.0	9575.6	6780.3	11866.0	10619.0	7442.3	6510.6	7276.7	9015.5	8779.7	11632.0	True	False	9154.668089499699	7900.629329605619	9375.488758484487	9688.048757061095	8421.09289810683	7768.681306930523	8908.685208171893	8698.419754965958	8371.533663332022	9525.33208361544	0.9610865016713358	0.8294334790905109	0.9842689657624957	1.0170825197502085	0.8840734185626961	0.8155811512643703	0.9352624275951237	0.9131880840068709	0.8788705306906758	1.0	13.21755367511935														
RTS(ph)PSSLPGR	ddPTM_K562_Methotrexat_30min_R1	1	RTSPSSLPGR	10	1	Q5SNT2;H0Y4R5	Q5SNT2	TMEM201	Transmembrane protein 201	1	RT(0.176)S(0.824)PSSLPGR	104.17	0.0029276999999999997	9229300.0	534.71	456.2	574.11	632.78	762.42	674.69	588.02	435.92	679.63	720.95	True	False	511.204788643676	531.5792959258564	453.6121566773581	577.3051598543291	862.6915936437132	805.0642937629333	719.8984534348318	420.5884465181919	648.0341496418266	590.3789688516634	0.8658926140916099	0.9004035102399103	0.7683406432306892	0.9778552257327797	1.4612505511870124	1.36363985886701	1.2193836356249184	0.7124041822429272	1.097657917764766	1.0	9.205497518771555	-7.528617654094501	24.99231026042544	1.1498882819098624	0.8542091027371431	0.3254187119044105	0.19331230407910185	193.65205679598893	843327.6349486748	0.06335209031173432	0.08203174573170778	2.9606178000253992e-08	7.528617654094501	-0.29567917917271924	
RTS(ph)SEDNLYLAVLR	ddPTM_K562_Methotrexat_30min_R1	1	RTSSEDNLYLAVLR	14	1	Q15149-4	Q15149-4	PLEC	Plectin	1	RT(0.018)S(0.633)S(0.349)EDNLYLAVLR	131.18	0.00028039	9126700.0	582.78	712.82	869.41	818.33	557.16	544.28	591.86	772.76	647.17	664.32	True	False	557.1616890010687	830.6013891316728	686.9327221906285	746.5882794392894	630.4363058609839	649.4544069265722	724.5996711845509	745.5815927954625	617.0832079568304	544.0052106075834	1.024184471282529	1.52682616441118	1.2627318797616176	1.372391780228441	1.1588791680080934	1.193838577761444	1.33197193162041	1.3705412710344158	1.1343332672634299	1.0	9.087476659782912	-9.987728176022566	5.029795606051563	1.0004334379247946	1.2849845384966667	0.3250614631592076	0.12984791244034685	0.16200097890226908	12.708822737659746	0.11923692578541209	0.031081096839969007	1.0286599327090025e-10	9.987728176022566	0.28455110057187216	
RTSDPS(ph)AAVNHVSSTTSLGENYEDDDLVNSDEVMK	ddPTM_K562_Methotrexat_30min_R1	1	RTSDPSAAVNHVSSTTSLGENYEDDDLVNSDEVMK	35	1	H7C3A2;Q8NHH9-2;Q8NHH9	H7C3A2	ATL2	Atlastin-2	1	RT(0.005)S(0.022)DPS(0.845)AAVNHVS(0.022)S(0.022)T(0.022)T(0.022)S(0.022)LGENY(0.016)EDDDLVNSDEVMK	90.51799999999999	1.8203999999999997e-10	23612000.0	2250.8	1769.0	3507.4	2438.2	1806.8	1795.4	1632.0	2371.3	2374.8	2924.1	True	False	2151.8575270318224	2061.2971821412534	2771.244671456977	2224.4467915497116	2044.4258694623188	2142.3356401043	1998.017543630565	2287.9000349343664	2264.3960663440535	2394.5171548916696	0.8986603092969592	0.860840432038796	1.1573292201292877	0.9289750908676818	0.8537946221374266	0.8946837719361512	0.8344135432685832	0.9554744806319307	0.9456587361331713	1.0	11.225519056084188														
RTSPS(ph)DGAMANYESTEVMGDGESAHDSPR	ddPTM_K562_Methotrexat_30min_R1	1	RTSPSDGAMANYESTEVMGDGESAHDSPR	29	1	Q14C86-4;Q14C86-2;Q14C86-6;F8W9S7;Q14C86-3	Q14C86-4	GAPVD1	GTPase-activating protein and VPS9 domain-containing protein 1	1	RT(0.073)S(0.073)PS(0.848)DGAMANY(0.005)ESTEVMGDGESAHDSPR	94.40299999999999	2.3654e-06	72609000.0	714.03	565.25	966.37	669.88	840.04	783.81	757.56	904.02	875.31	908.8	True	False	682.6420961553812	658.6479548927896	763.5421432274272	611.152660455795	950.5199841615704	935.2701894119147	927.462114186747	872.2251041965861	834.6170291526086	744.2075135479464	0.9172738567243734	0.885032659442984	1.0259801591995552	0.8212126985149294	1.2772243854809349	1.2567330648854822	1.2462412664515437	1.172018675326626	1.1214842822180637	1.0	9.539561145817075	-7.763315558072885	24.999999964161784	1.1948049145047546	0.9185364835649309	0.6806012231113816	0.08902702759324056	27.402820384018707	365143.345792117	0.02648412572491515	0.031581032487184836	1.7245843548255463e-08	7.763315558072885	-0.2762684309398237	
RTSRSDGFRPDS(ph)HMR	ddPTM_K562_Methotrexat_30min_R1	1	RTSRSDGFRPDSHMR	15	3	Q9NRG1-2	Q9NRG1-2			1	RTSRSDGFRPDS(1)HMR	61.821000000000005	0.025137	109390000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
RTSS(ph)EDNLYLAVLR	ddPTM_K562_Methotrexat_30min_R1	1	RTSSEDNLYLAVLR	14	1	Q15149-4	Q15149-4	PLEC	Plectin	1	RT(0.05)S(0.194)S(0.756)EDNLYLAVLR	115.38	0.0011937	17012000.0	1663.7	1168.8	2015.4	2201.2	1604.6	1300.8	1368.9	1886.5	1846.9	2163.3	True	False	1590.565740058132	1361.9243337968899	1592.3950820705907	2008.224213583471	1815.633025315052	1552.1611900677692	1675.9106712474752	1820.1507257216208	1761.0380221201076	1771.5054071944023	0.8978610697989169	0.7687949064484195	0.898893718079317	1.133625788229441	1.0249096717071478	0.8761820222304506	0.946037570329337	1.027459875837613	0.9940912485890335	1.0	10.790760153686275	-7.007078298488304	24.654598925567814	0.9966933573686323	0.8334570288632204	0.5058418387484657	0.06777093459006507	226.45443702030087	788781.344555167	0.018858704234030216	0.036949866716142796	9.838337154410624e-08	7.007078298488304	-0.16323632850541192	
RTSVPS(ph)PEQPQPYR	ddPTM_K562_Methotrexat_30min_R1	1	RTSVPSPEQPQPYR	14	1	Q8TEH3	Q8TEH3	DENND1A	DENN domain-containing protein 1A	1	RTSVPS(1)PEQPQPYR	204.67	5.992e-13	11875000.0	2495.9	2210.5	2980.9	2654.0	2085.5	2389.0	1929.8	2491.7	2615.5	2896.1	True	False	2386.183224506277	2575.7475529243875	2355.249826408766	2421.327940600824	2359.77980449616	2850.640439015916	2362.6067743249178	2404.0654986909944	2493.905975881283	2371.588226217218	1.0061541030300771	1.0860854867005356	0.9931107771459496	1.0209731663506119	0.9950208802731776	1.201996369986541	0.996212895732483	1.0136943134203271	1.0515763016158868	1.0	11.211637824240594	-5.992997218926726	18.171736652056875	1.0408605954348873	0.9596637700471309	0.026434614911680643	0.06107593787672765	3112.882872147589	503.62467474602886	0.01458171409260609	6057.493357158771	1.0162552006004644e-06	5.992997218926726	-0.08119682538775641	
RTT(ph)S(ph)PPT(ph)DEQLNMKNT(ph)GK	ddPTM_K562_Methotrexat_30min_R1	1	RTTSPPTDEQLNMKNTGK	18	2	C9JNW7;Q6IV72	C9JNW7	ZNF425	Zinc finger protein 425	4	RT(0.08)T(0.941)S(0.985)PPT(0.995)DEQLNMKNT(1)GK	43.794	0.033615	0.0	534.87	548.13	1065.4	772.16	748.29	520.04	535.78	730.03	513.17	1015.0	True	False	511.35775523525473	638.6991658830336	841.7870995524502	704.46593165574	846.7032509740748	620.5303699898851	655.9423036313628	704.354431115057	489.3128387088506	831.1736644489056	0.6152237217168101	0.7684304654990619	1.0127692148554557	0.8475556454532557	1.0186839251403204	0.7465712600522736	0.789175994966435	0.8474214971453243	0.5887010857511715	1.0	9.699006133272293	-11.519850429943467	13.832138744999513	1.0000054444611977	0.8157119539662485	0.15527614020531322	0.1347213043219665	0.0	0.0	0.13246185823573053	0.032126719580677046	3.020991964196417e-12	11.519850429943467	-0.18429349049494914	
RVAFISLS(ph)PVR	ddPTM_K562_Methotrexat_30min_R1	2	RVAFISLSPVR	11	1	Q6ZU65;Q6ZU65-2	Q6ZU65	UBN2	Ubinuclein-2	1	RVAFISLS(1)PVR;RVAFIS(0.47)LS(0.53)PVR	81.789	0.023547	42989000.0	4312.7	2549.8	2847.9	4075.3	3502.9	2353.2	2899.4	5515.1	5487.5	7630.099999999999	True	False	4123.118871881171	2971.1111108104974	2250.1647088562254	3718.024776311434	3963.592748582884	2807.9225956853275	3549.6642561289605	5321.130807011561	5232.387322748442	6248.214952819308	0.6598874883490916	0.475513588000022	0.3601292090376805	0.5950539161002766	0.6343560166403108	0.44939596619004635	0.5681085370674208	0.8516241594106122	0.837421145440506	1.0	12.609228370989628	-9.28477696903435	2.8969607500834336	0.9049257125048602	0.5241685296084737	0.7679846211773944	0.09172047138875743	0.13547413391302585	2.260514871208113	0.05952692926419998	0.02644734853185357	5.190665359591686e-10	9.28477696903435	-0.3807571828963865	
RVGDPPQPLPEEPMEVQGAERAS(ph)PEPQEWVPIIQQDIQSQR	ddPTM_K562_Methotrexat_30min_R1	1	RVGDPPQPLPEEPMEVQGAERASPEPQEWVPIIQQDIQSQR	41	2	P46379-4;H0Y4L1	P46379-4	BAG6	Large proline-rich protein BAG6	1	RVGDPPQPLPEEPMEVQGAERAS(1)PEPQEWVPIIQQDIQSQR	72.943	5.2405e-09	16066000.0	2105.9	1868.6	2578.3	2041.6	1694.0	2009.7	1793.5	2243.4	2473.5	2344.0	True	False	2013.3271575334622	2177.354389230722	2037.150064554236	1862.6160977884874	1916.7906923119142	2398.0460821642037	2195.738029719007	2164.4983504287748	2358.5075248871567	1919.478886175602	1.0488925781021978	1.134346621321225	1.0613037107238432	0.9703759240090373	0.9985995189199274	1.2493214170967548	1.1439240335140273	1.1276489499404463	1.228722827780764	1.0	10.906498975622004	-8.24650199779516	24.940750176579414	1.1575265469818699	1.0448100727931906	0.3392565185532138	0.07441027420753243	900.6915919247887	1503874.390809976	0.024560469361114376	0.02446864625794465	5.6688896377503615e-09	8.24650199779516	-0.11271647418867925	
RVGDPPQPLPEEPMEVQGAERAS(ph)PEPQR	ddPTM_K562_Methotrexat_30min_R1	3	RVGDPPQPLPEEPMEVQGAERASPEPQR	28	2	P46379-3;P46379;P46379-2;P46379-5;A0A0G2JK23;A0A024RCR6;A0A0G2JL47;H0Y710	P46379-3	BAG6;BAT3	Large proline-rich protein BAG6	1	RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR	76.691	0.00015515	192311000.0	4259.389999999999	3622.41	5001.139999999999	3729.32	3878.57	3874.3199999999997	3578.3900000000003	4904.09	4566.219999999999	4840.23	True	False	4072.152315649581	4220.951682057831	3951.4690586218694	3402.376305742831	4388.669938300013	4622.977507613286	4380.935047764817	4731.610375035327	4353.937428862026	3963.61744421234	1.0273827817555206	1.064924085502058	0.9969350257027934	0.8584017891814884	1.107238526439612	1.1663531036184487	1.1052870539163264	1.1937606092496154	1.0984756955340453	1.0	11.952602009554997	-7.968249891496864	24.992217836688475	1.12579274866505	0.9919018083298722	0.4338155669284577	0.06906086722677061	174.6432545958044	137470.4536214649	0.021374806369573857	0.024236579693803526	1.0758459975473716e-08	7.968249891496864	-0.1338909403351779	
RVIMERDT(ph)YPRK	ddPTM_K562_Methotrexat_30min_R1	1	RVIMERDTYPRK	12	3	O60832;O60832-2;H7C2Q2	O60832	DKC1	H/ACA ribonucleoprotein complex subunit 4	1	RVIMERDT(1)YPRK	58.595	0.03254	12687000.0	138.96	135.91	227.85	102.59	206.59	92.777	223.34	99.844	65.78699999999999	239.86	True	False	132.85148478600593	158.36681742499596	180.0273987544826	93.59609398125043	233.76020609487506	110.7048421978148	273.4296802662076	96.33242992788209	62.72857672923034	196.41902970907836	0.6763676868925375	0.8062702359316071	0.9165476431745241	0.4765123527994115	1.190109769104876	0.5636156657620333	1.392073266379494	0.49044346706407577	0.31936099481877783	1.0	7.617790899147059														
RVLVDVER	ddPTM_K562_Methotrexat_30min_R1	2	RVLVDVER	8	1	P08621-2;P08621;P08621-4	P08621-2	SNRNP70	U1 small nuclear ribonucleoprotein 70 kDa	0	;	96.03399999999999	0.0086461	6060700.0	3106.7	2817.29	3642.0	3498.9	3151.4	3057.12	2871.6000000000004	3265.6	3477.3	3267.8	False	True	2970.133187857545	3282.799286757905	2877.5939708748087	3192.1568693927015	3565.864337515802	3647.865173262591	3515.6293984617214	3150.7469970403004	3315.6410819850826	2675.9697543705756	1.1099277871158753	1.2267699518636987	1.0753462239903597	1.1928972157398468	1.3325503144016446	1.3631937234360179	1.313777703473575	1.1774224995982434	1.239042809273069	1.0	11.385846094413443	-6.260992921077905	20.1672192438613	1.2255684303412653	1.1099273388317494	0.06737605931691704	0.10732333932400058	6.724783114785828	301951.51272269234	0.027506542680475244	0.15634370422149974	5.482859018097952e-07	6.260992921077905	-0.11564109150951585	
RVNDAEPGS(ph)PEAPQGK	ddPTM_K562_Methotrexat_30min_R1	1	RVNDAEPGSPEAPQGK	16	1	Q8N8A6	Q8N8A6	DDX51	ATP-dependent RNA helicase DDX51	1	RVNDAEPGS(1)PEAPQGK	109.67	0.00090713	23217000.0	5194.2	4142.3	6996.7	5678.8	4585.2	3683.3	3817.9	4796.5	4762.8	6560.9	True	False	4965.86918735947	4826.744667938791	5528.188285562819	5180.948420905791	5188.234169060561	4395.045596076736	4674.161262148979	4627.804376317919	4541.37846756925	5372.657433579142	0.9242854674341895	0.8983905502278272	1.0289485890188361	0.9643176556399876	0.9656737346837089	0.8180394247002747	0.8699905623863979	0.8613622650485984	0.845276015400797	1.0	12.391420137850952	-8.242226391780848	24.58913263696053	0.8697098512225004	0.9575836078191965	0.3255019069142472	0.05488941081858083	701.5247346682015	897824.6388608329	0.01765089357053488	0.017621675760852613	5.724975180515262e-09	8.242226391780848	0.08787375659669605	
RVNS(ph)GDTEVGSSLLR	ddPTM_K562_Methotrexat_30min_R1	2	RVNSGDTEVGSSLLR	15	1	A0A499FJI4;O75592-2;O75592	A0A499FJI4	MYCBP2	E3 ubiquitin-protein ligase MYCBP2	1	RVNS(0.999)GDT(0.001)EVGSSLLR;RVNS(1)GDTEVGSSLLR	172.42	4.685e-06	65631000.0	2642.3	2492.7	3180.2	2656.3	2687.9	2201.3999999999996	2418.91	2637.7	2391.8	2897.8999999999996	True	False	2526.147655800688	2904.5763063445465	2512.7194800044135	2423.426303171804	3041.4059633206584	2626.789394076865	2961.412142440817	2544.930595937407	2280.605740054619	2373.062228774862	1.0645096555705829	1.2239781456738656	1.0588510699534635	1.0212232421831364	1.2816376774455012	1.1069197268514086	1.2479285652655228	1.0724247198739811	0.961039163828428	1.0	11.212534217460181	-9.555334021110104	5.13589308505171	0.9868952151473854	1.143913638991827	0.38605256470312865	0.08194516146037634	0.1955439204369398	13.255155188998234	0.05622393069684815	0.020892658561877442	2.7839791531556083e-10	9.555334021110104	0.15701842384444153	
RVPLS(ph)PLSLLAGPADAR	ddPTM_K562_Methotrexat_30min_R1	1	RVPLSPLSLLAGPADAR	17	1	Q53ET0;H0YDQ8;Q5T4K5	Q53ET0	CRTC2	CREB-regulated transcription coactivator 2	1	RVPLS(0.995)PLS(0.005)LLAGPADAR	196.65	8.494999999999999e-12	15663000.0	1393.7	966.23	1425.9	1257.2	1081.5	759.59	1251.5	1474.6	1441.5	1732.3	True	False	1332.43461676926	1125.8830843981589	1126.62307607644	1146.983227928921	1223.7362064553336	906.3700171921715	1532.1807327534636	1422.7374821887636	1374.4849796340543	1418.5636836697931	0.9392843142031387	0.7936782094163894	0.7941998579590666	0.8085525106364633	0.8626586317856064	0.6389350211246154	1.0800930197153684	1.0029422708102698	0.9689272293213456	1.0	10.470215203728547	-8.780355240084143	24.9998811473415	1.01323584915821	0.807773364842414	0.6472633195496598	0.07477420929542351	154.06619534305472	203617.46490079106	0.030473868422221356	0.02058361626303548	1.65822996931163e-09	8.780355240084143	-0.20546248431579606	
RVPLS(ph)PLSLLAGPADARR	ddPTM_K562_Methotrexat_30min_R1	2	RVPLSPLSLLAGPADARR	18	2	Q53ET0;H0YDQ8;Q5T4K5	Q53ET0	CRTC2	CREB-regulated transcription coactivator 2	1	RVPLS(1)PLSLLAGPADARR;RVPLS(0.999)PLS(0.001)LLAGPADARR	121.47	0.00042472	33714000.0	1823.3200000000002	1167.42	1496.5900000000001	2188.2	1572.88	1563.4299999999998	1663.5	1855.76	1678.8400000000001	2141.31	True	False	1743.1690359817235	1360.3163122528786	1182.476211112447	1996.3639033996697	1779.7412893291396	1865.540720623965	2036.582220483728	1790.491868945219	1600.7910948379024	1753.4980092818578	0.9941095038343588	0.7757729435974632	0.6743527536690663	1.1385036611574353	1.0149662445627923	1.0638966857954941	1.1614397106260799	1.021097178022182	0.9129129810038985	1.0	10.77602007738522	-7.268508104108217	24.99461672504888	1.0499937181346841	0.8108478527163554	0.532557294699723	0.09861337201028722	405.64948728641855	1434353.6339548114	0.028136713375431655	0.04276308189885065	5.388797895677009e-08	7.268508104108217	-0.23914586541832872	
RVPS(ph)PTPAPK	ddPTM_K562_Methotrexat_30min_R1	4	RVPSPTPAPK	10	1	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	RVPS(0.998)PT(0.002)PAPK;RVPS(0.95)PT(0.05)PAPK;RVPS(0.956)PT(0.044)PAPK;RVPS(0.992)PT(0.008)PAPK	126.12	0.001929	1562202000.0	25525.800000000003	20221.399999999998	33904.3	26946.100000000002	20651.9	19501.8	18872.6	23866.7	22539.0	27084.700000000004	True	False	24403.716395729927	23562.642644969565	26788.250759673487	24583.777249519175	23367.986835039217	23270.246845374862	23105.26096441311	23027.294633225665	21491.166809553917	22179.398373890916	1.1002875724734458	1.0623661763840706	1.207798800855122	1.1084059556123325	1.0535897521254445	1.0491829603803893	1.041744260818729	1.0382290017538471	0.9689697821043167	1.0	14.436932611831043	-8.388003243910358	0.8951304735496459	1.0017243443229167	1.1216803514541414	0.5998256498736346	0.039289435210510905	0.44148538774029594	0.7473550617993465	0.02729263932675896	0.022273274947253254	4.09257602818191e-09	8.388003243910358	0.11995600713122467	
RVQDLSAGGQGSLTDSGPERRPEGPGAQAPS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	2	RVQDLSAGGQGSLTDSGPERRPEGPGAQAPSSPR	34	3	P40222	P40222	TXLNA	Alpha-taxilin	1	RVQDLSAGGQGSLTDS(0.001)GPERRPEGPGAQAPS(0.5)S(0.5)PR;RVQDLSAGGQGS(0.001)LT(0.003)DS(0.088)GPERRPEGPGAQAPS(0.454)S(0.454)PR	65.73	3.6088000000000004e-05	98520000.0	999.47	910.61	1080.18	1230.92	801.1700000000001	918.4100000000001	782.69	940.49	1025.82	1043.15	True	False	955.5344955315871	1061.0728247765107	853.4649795331002	1123.0071547265889	906.5378978509659	1095.8797344481404	958.2281563873815	907.4124336251934	978.1298521042016	854.2254266698286	1.118597580566887	1.2421461497734507	0.9991097816653702	1.3146496459425208	1.0612396558892843	1.28289289950124	1.1217509178145215	1.0622634322215305	1.1450488613028187	1.0	9.738473031309585	-10.1409526876343	0.7568429324102226	1.0029353908927006	1.1656183431250697	0.19494071957821235	0.0956294339163985	1.3124180089995734	1.646241283512949	0.08789234542449997	0.03267171267006303	7.228485469742913e-11	10.1409526876343	0.16268295223236917	
RVQS(ph)LPSVPLSCAAYR	ddPTM_K562_Methotrexat_30min_R1	1	RVQSLPSVPLSCAAYR	16	1	Q96AD5-2;Q96AD5	Q96AD5-2	PNPLA2	Patatin-like phospholipase domain-containing protein 2	1	RVQS(1)LPSVPLSCAAYR	110.64	0.00074728	11494000.0	834.51	488.56	490.62	893.3	775.75	646.6	762.75	1260.4	1313.7	1401.3	True	False	797.8259396140595	569.2862358999047	387.64556671900056	814.9857759377231	877.7747222910082	771.5462988144375	933.8161038016015	1216.0710175984796	1252.6263737393401	1147.5109911253705	0.6952664905036134	0.4961052576425455	0.3378142516428835	0.710220452998417	0.764937964934148	0.6723650621052245	0.8137753023923567	1.0597467274852608	1.09160294186889	1.0	10.164292256833741	-8.725731873018177	0.8082603417836242	1.0863029256630108	0.5369862600814722	0.7498346431199343	0.1143158821003178	0.3275527186115444	0.42376539459543705	0.09789441142240853	0.06067107541352012	1.8804774374139905e-09	8.725731873018177	-0.5493166655815386	
RVS(ph)FADPIYQAGLADDIDRR	ddPTM_K562_Methotrexat_30min_R1	1	RVSFADPIYQAGLADDIDRR	20	2	Q5UIP0-2;Q5UIP0;H7C2B5	Q5UIP0-2	RIF1	Telomere-associated protein RIF1	1	RVS(1)FADPIYQAGLADDIDRR	56.906000000000006	0.023042	10022000.0	1279.7	1353.6	1324.3	1479.1	1242.9	1112.8	1441.3	1468.9	1591.3	2170.8	True	False	1223.445920269514	1577.2593927339758	1046.3475276302886	1349.4295994508973	1406.363135463092	1327.832850789833	1764.5482142369694	1417.2379544195537	1517.3208103306772	1777.6470845179158	0.6882389260078039	0.8872736362975648	0.5886137562079989	0.7591099556281455	0.7911374241330286	0.7469608913683399	0.9926313437605088	0.7972549595263999	0.853555704923378	1.0	10.79575321965479	-8.7320757715155	24.17063333293309	0.8939650399503123	0.745915267727056	0.44524379332863884	0.09068459855714292	147.10512919871653	121089.19056689725	0.03369293430283094	0.026093389087987785	1.8532082652904004e-09	8.7320757715155	-0.14804977222325633	
RVS(ph)GDAAQDLDR	ddPTM_K562_Methotrexat_30min_R1	3	RVSGDAAQDLDR	12	1	Q9Y4H2	Q9Y4H2	IRS2	Insulin receptor substrate 2	1	RVS(1)GDAAQDLDR;RVS(1)GDAAQDLDR;RVS(1)GDAAQDLDR	95.751	0.0078021	36015300.0	4517.27	3795.9700000000003	5514.5	4581.83	4726.43	4476.29	4027.48	5141.6	4689.299999999999	5536.1	True	False	4318.696219626371	4423.189522042249	4357.081810101354	4180.148077649991	5348.038389529988	5341.269690566155	4930.744912145362	4960.767013713379	4471.295466526515	4533.458644094173	0.9526272452606186	0.9756766013084572	0.9610944208738754	0.922065999895147	1.1796817417750098	1.1781886876864607	1.0876342543829625	1.0942565937324407	0.986287913390665	1.0	12.146396408843902	-7.748710961965144	24.999977334306113	1.0969113606681284	0.9550831080125238	0.5397691571178171	0.06061009259729361	178.56360720221502	350716.437400055	0.018656819796699857	0.023923813847539804	1.7835653971413542e-08	7.748710961965144	-0.14182825265560461	
RVS(ph)LVGADDLR	ddPTM_K562_Methotrexat_30min_R1	3	RVSLVGADDLR	11	1	A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160-2;Q14160;Q14160-3;H0YCG0	A0A0G2JMS7	SCRIB	Protein scribble homolog	1	RVS(1)LVGADDLR;RVS(1)LVGADDLR;RVS(1)LVGADDLR	113.59	0.0018329999999999998	46561400.0	6347.2	6188.9	7272.4	7304.5	6828.1	6249.0	6321.4	8117.099999999999	7485.1	8037.200000000001	True	False	6068.184687922683	7211.510531686836	5746.022623226241	6664.1258259678725	7726.114832452766	7456.530809296963	7739.134865383732	7831.616992183922	7137.119334761616	6581.585197939651	0.921994398829983	1.0957102756862254	0.8730453911050212	1.0125411470862764	1.1738987797151674	1.1329384312507587	1.1758770315404332	1.1899286808040699	1.0844073456643657	1.0	12.684219388648957	-7.6478333224292525	5.102835857988676	1.1380396909004247	0.9719219368848805	0.49743882115310145	0.07433770578910032	0.16105132562822663	6.542539272994342	0.021111541208435322	0.02737633225512929	2.249917934563103e-08	7.6478333224292525	-0.16611775401554418	
RVS(ph)PLNLSSVT(ph)P	ddPTM_K562_Methotrexat_30min_R1	1	RVSPLNLSSVTP	12	1	Q9UJX2-3;Q9UJX2	Q9UJX2-3	CDC23	Cell division cycle protein 23 homolog	2	RVS(1)PLNLSSVT(1)P	153.7	6.342100000000001e-07	96927000.0	3112.6	3807.2	4378.2	3957.9	3378.4	3420.7	3548.9	3537.2	3800.7	3743.8	True	False	2975.7738309220044	4436.275088664887	3459.275651643081	3610.9170520361727	3822.7188163557116	4081.7018625959545	4344.831164577518	3412.7946710959527	3624.0062865731215	3065.761541836268	0.9706475178560807	1.4470385345129408	1.128357703114481	1.177820584791268	1.2469067682498414	1.3313826946081329	1.4172110600536594	1.1131963867782835	1.1820900735816808	1.0	11.582029771681889	-10.053931649199896	1.5717509170544623	1.0053420663919799	1.245304096447814	0.20569957548496853	0.13625458483027017	0.6755722474525176	3.711529735857181	0.1252893690990805	0.036549644274868474	8.832188935909086e-11	10.053931649199896	0.23996203005583405	
RVS(ph)PLNLSSVTP	ddPTM_K562_Methotrexat_30min_R1	5	RVSPLNLSSVTP	12	1	Q9UJX2-3;Q9UJX2	Q9UJX2-3	CDC23	Cell division cycle protein 23 homolog	1	RVS(0.996)PLNLS(0.004)SVTP;RVS(0.917)PLNLS(0.083)SVTP;RVS(0.979)PLNLS(0.021)SVTP;RVS(1)PLNLSSVTP;RVS(0.924)PLNLS(0.075)S(0.001)VTP	153.49	7.297900000000001e-08	725649000.0	16640.6	14917.099999999999	16206.699999999999	17306.899999999998	15715.099999999999	15360.300000000001	14685.000000000002	16878.300000000003	17450.0	18099.0	True	False	15909.09914889183	17381.897227653648	12805.135147659747	15789.630947695712	17781.911103158778	18328.46058410052	17978.485066308134	16284.680622288486	16638.753308785464	14821.095717104181	1.073409109053391	1.172780849636791	0.8639803285854277	1.0653484228884509	1.1997703437430534	1.236646799531069	1.213033463211508	1.0987501149118999	1.1226398929185533	1.0	13.85536448894742	-7.634179665413389	6.147989745657674	1.1575099768130095	1.036937314891764	0.2109920254390073	0.09509473515475567	0.30317327960270346	15.25160753741758	0.028769773213036025	0.0372379692106116	2.3217760907175965e-08	7.634179665413389	-0.1205726619212455	
RVS(ph)SSSELDLPSGDHCEAGLLQLDVPLLR	ddPTM_K562_Methotrexat_30min_R1	1	RVSSSSELDLPSGDHCEAGLLQLDVPLLR	29	1	A0A0D9SFK2;Q92614-3;Q92614-4;Q92614;Q92614-5;Q92614-2	A0A0D9SFK2	MYO18A	Unconventional myosin-XVIIIa	1	RVS(0.425)S(0.19)S(0.19)S(0.19)ELDLPS(0.005)GDHCEAGLLQLDVPLLR	65.668	0.00052458	0.0	125.69	0.0	166.32	0.0	164.2	0.0	184.67	186.0	187.96	302.91	True	False	120.16481809695651	0.0	131.41170489728125	0.0	185.7951780859601	0.0	226.08694839599045	179.45827457419634	179.2217806257489	248.05006374208682	0.48443776342625494	0.0	0.5297789604034057	0.0	0.749022899986605	0.0	0.9114569252079177	0.7234760268426713	0.7225226146770799	1.0	7.954487517738558	-8.775868836008678	24.995657258750573	0.8163203564278346	0.2985691076422926	0.5350768957510048	0.24870704962461773	187.23231928385718	324333.1147691799	0.0956310121365357	0.06480154865763561	1.67544881239141e-09	8.775868836008678	-0.517751248785542	
RVS(ph)TDLPEGQDVYTAACNSVIHR	ddPTM_K562_Methotrexat_30min_R1	3	RVSTDLPEGQDVYTAACNSVIHR	23	1	Q15751;H0YNB1	Q15751	HERC1	Probable E3 ubiquitin-protein ligase HERC1	1	RVS(0.709)T(0.291)DLPEGQDVYTAACNSVIHR;RVS(0.762)T(0.238)DLPEGQDVYTAACNSVIHR;RVS(0.786)T(0.214)DLPEGQDVYTAACNSVIHR	187.89	7.0067e-20	205556000.0	6463.799999999999	5273.6	7074.1	7452.6	5543.0	5864.799999999999	5823.9	6092.2	6339.4	6771.299999999999	True	False	6179.659091535583	6144.972764126695	5589.3430832964	6799.242128907956	6272.001657311066	6998.089596793862	7130.057826194881	5877.933872908168	6044.682677691383	5544.951954761453	1.1144657594786023	1.108210281037693	1.0080056831686033	1.2262039751434535	1.1311192068896638	1.2620649653753266	1.2858646719332343	1.0600513621873286	1.0901235442627797	1.0	12.436959244611257	-7.265042127312351	24.985593178590634	1.1627243055909602	1.080025546825564	0.11599212596953068	0.08917390066009208	607.7208906511156	4214632.435584167	0.025513779838732563	0.03953737004621465	5.431976378308416e-08	7.265042127312351	-0.08269875876539623	
RVS(ph)VCAETYNPDEEEEDTDPR	ddPTM_K562_Methotrexat_30min_R1	2	RVSVCAETYNPDEEEEDTDPR	21	1	P13861-2;P13861	P13861-2	PRKAR2A	cAMP-dependent protein kinase type II-alpha regulatory subunit	1	RVS(0.994)VCAET(0.005)YNPDEEEEDTDPR;RVS(1)VCAETYNPDEEEEDTDPR	101.04	6.454e-05	124675000.0	2300.5	1816.44	2240.62	2331.7	1895.02	2129.41	1727.81	2235.25	2387.7	2126.92	True	False	2199.3727745409215	2116.575835799131	1770.3444818839964	2127.2834811977928	2144.248345776225	2540.8883454352763	2115.3153750369643	2156.634990548238	2276.6963481597186	1741.7141777238098	1.2627633182702864	1.2152257028562605	1.0164380037358383	1.2213734655234139	1.2311137919187602	1.458843464635444	1.2145020130693325	1.238225547068047	1.3071584174247577	1.0	10.766292175985152	-6.255141350583727	21.236580595233427	1.2215355476846508	1.2627634580374578	0.009269865390950205	0.12459893082525632	726.8162494858573	2450148.335557708	0.0314803272631965	0.2625550085143471	5.557233555814304e-07	6.255141350583727	0.04122791035280704	
RVST(ph)DLPEGQDVYTAACNSVIHR	ddPTM_K562_Methotrexat_30min_R1	1	RVSTDLPEGQDVYTAACNSVIHR	23	1	Q15751;H0YNB1	Q15751	HERC1	Probable E3 ubiquitin-protein ligase HERC1	1	RVS(0.411)T(0.589)DLPEGQDVYTAACNSVIHR	120.13	1.1161e-06	18230000.0	1274.7	1247.1	1488.4	1334.4	1028.6	1108.1	1103.2	1201.0	1186.5	1303.3	True	False	1218.6657142826832	1453.1620779244536	1176.0051801894745	1217.4152237896535	1163.8789292278834	1322.2246423078836	1350.6206826796808	1158.7601492667204	1131.339873975585	1067.2597407647877	1.1418642226768523	1.361582398754339	1.1018921966894029	1.1406925393037555	1.0905301537879237	1.2388967669298485	1.2655032613821258	1.0857339642891097	1.0600417412586727	1.0	10.059695614630092	-9.46351166172023	4.800948643033176	1.0408311524727976	1.1905528631747353	0.4178972431886191	0.07881737236136467	0.21889837328174683	10.327133039125277	0.04921595548250137	0.02155170351558397	3.439444756241003e-10	9.46351166172023	0.14972171070193774	
RVT(ph)QHESDNENEIQIQNK	ddPTM_K562_Methotrexat_30min_R1	2	RVTQHESDNENEIQIQNK	18	1	Q5VZL5-2;Q5VZL5-4;Q5VZL5	Q5VZL5-2	ZMYM4	Zinc finger MYM-type protein 4	1	RVT(0.747)QHES(0.253)DNENEIQIQNK;RVT(0.911)QHES(0.089)DNENEIQIQNK	121.14	0.00012736	52450000.0	10209.2	8219.0	13917.6	12234.0	7680.7	6922.200000000001	7630.3	9162.9	9190.900000000001	12417.5	True	False	9760.415792150923	9577.05005088693	10996.485955257345	11161.464214510355	8690.846676765124	8259.817181647539	9341.589009291858	8840.635613418837	8763.617065084032	10168.570421964818	0.9598611591524948	0.9418285612891895	1.0814190686533647	1.0976434003349003	0.854677335763176	0.8122889294060216	0.9186727948614466	0.8694079154255991	0.8618337388069822	1.0	13.311829247524356	-7.7759367551684395	24.99981068915672	0.8775505661996689	1.0189645910461382	0.5080783794028008	0.06427644599740827	190.9737719313452	329320.9054457692	0.02056948198970685	0.023427938638562736	1.6751868100345298e-08	7.7759367551684395	0.14141402484646937	
RVT(ph)SGPSLGSLPPAAMES(ph)MESLRLK	ddPTM_K562_Methotrexat_30min_R1	1	RVTSGPSLGSLPPAAMESMESLRLK	25	2	Q13393-4;Q13393-2;Q13393	Q13393-4	PLD1	Phospholipase D1	2	RVT(0.317)S(0.317)GPS(0.358)LGS(0.008)LPPAAMES(0.5)MES(0.499)LRLK	51.503	0.014169999999999999	16233000.0	2336.2	1475.8	2649.5	2373.4	1600.0	1191.4	1271.0	2397.5	2445.9	3247.6	True	False	2233.5034452868936	1719.6508656891256	2093.4061575598057	2165.3277069412206	1810.4280446865787	1421.6211883815665	1556.054104138755	2313.178566084063	2332.1906428629445	2659.4281701125783	0.8398434935704037	0.646624295032691	0.7871640155903095	0.8142080057945533	0.6807583919854244	0.5345589718715309	0.585108528828167	0.8698029870030827	0.8769519211207795	1.0	11.376900355640586	-9.43077236459249	5.344753497262782	0.9194381915972807	0.6975806292869527	0.5226250142288623	0.0961866327546953	0.1984732940716164	8.818957649109223	0.060294317643596385	0.027630343186681176	3.70875064972368e-10	9.43077236459249	-0.22185756231032794	
RVTFGEDLS(ph)PEVFDESLPANTPLR	ddPTM_K562_Methotrexat_30min_R1	1	RVTFGEDLSPEVFDESLPANTPLR	24	1	E9PEI0;Q69YH5	E9PEI0	CDCA2	Cell division cycle-associated protein 2	1	RVT(0.002)FGEDLS(0.997)PEVFDESLPANTPLR	91.249	6.883699999999999e-05	14074000.0	1654.5	1744.8	2320.0	2390.9	2198.0	1871.1	1650.8	2446.0	2447.8	2590.4	True	False	1581.7701610423626	2033.0985434709223	1833.0637046758814	2181.293509111722	2487.0755263881874	2232.6635937390874	2021.0339221968986	2359.9727935940027	2334.002312277656	2121.2534585107833	0.7456771159033666	0.9584420642021017	0.8641417635980077	1.0283040437058801	1.1724556141132838	1.0525208973879618	0.9527545678656225	1.1125369220379782	1.1002939337179596	1.0	11.050701296614958	-6.514623158137018	0.8854462510958102	1.0664877147301086	0.6834436055238288	0.627233997631495	0.07303722348270618	1.093399644115948	0.8795372586256802	0.02791614797052598	0.3773216478540511	3.057573050598571e-07	6.514623158137018	-0.38304410920627985	
RVTNDIS(ph)PESSPGVGR	ddPTM_K562_Methotrexat_30min_R1	2	RVTNDISPESSPGVGR	16	1	A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154-4;Q15154-2;Q15154;E5RGQ4;E9PGW9;E7EV93;Q15154-3	A0A5H1ZRS1	PCM1	Pericentriolar material 1 protein	1	RVTNDIS(0.96)PES(0.037)S(0.003)PGVGR;RVTNDIS(0.993)PES(0.007)SPGVGR	211.26	3.0799e-22	57920000.0	4988.6	4790.1	5945.3	5047.7	4897.8	4549.1	4205.9	4968.0	4711.3	5047.5	True	False	4769.307117180979	5581.582607221497	4697.462777331686	4605.175978059829	5541.946548291203	5428.1491926024655	5149.180138943503	4793.272624110797	4492.272691328423	4133.348838724979	1.1538602966431875	1.3503778231655998	1.136478666722144	1.1141512990421576	1.3407884900420688	1.3132569750093717	1.245764715211378	1.159658381408085	1.0868360902038363	1.0	12.013095411418591	-9.774456378091871	1.779595712328178	1.0058020491935784	1.238701983177696	0.4958705144706018	0.0791751490600539	0.29096056895754885	1.8197280368295505	0.0775217425855238	0.022893200290704466	1.6809067528079912e-10	9.774456378091871	0.23289993398411757	
RVTQHES(ph)DNENEIQIQNK	ddPTM_K562_Methotrexat_30min_R1	2	RVTQHESDNENEIQIQNK	18	1	Q5VZL5-2;Q5VZL5-4;Q5VZL5	Q5VZL5-2	ZMYM4	Zinc finger MYM-type protein 4	1	RVT(0.141)QHES(0.859)DNENEIQIQNK;RVT(0.042)QHES(0.958)DNENEIQIQNK	105.57	0.0005262999999999999	178718000.0	7002.4	4910.3	9243.8	7504.1	4701.6	4815.3	5073.9	6158.900000000001	6735.400000000001	7539.2	True	False	6694.582880437014	5721.643614170835	7303.652704001256	6846.227203866863	5319.9428093115075	5745.788575133249	6211.8512344528945	5942.287996102252	6422.272724125712	6173.777823658316	1.084357596216524	0.9267653902680343	1.1830119114447537	1.108920242907297	0.861699750341702	0.93067627945972	1.0061669551257058	0.9625043475537813	1.0402500555681073	1.0	12.591937850142854	-7.735935006393816	24.999980279882617	0.9651619270735611	1.0727816422438263	0.33911235592957123	0.07439460789708766	282.83729656045193	277242.5119007062	0.022679614629832947	0.02926828016244068	1.836813207954742e-08	7.735935006393816	0.10761971517026525	
RVVLGDGVQLPPGDY(ph)STTPGGTLFSTT(ph)PGGTR	ddPTM_K562_Methotrexat_30min_R1	2	RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR	32	1	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	2	RVVLGDGVQLPPGDY(0.507)S(0.172)T(0.096)T(0.221)PGGT(0.043)LFS(0.237)T(0.226)T(0.464)PGGT(0.034)R;RVVLGDGVQLPPGDY(0.236)S(0.248)T(0.246)T(0.246)PGGT(0.101)LFS(0.279)T(0.279)T(0.286)PGGT(0.078)R	59.02	0.0019569	57549000.0	1632.33	1573.85	1803.32	1670.69	1663.91	1723.24	1435.4	2036.58	1856.24	2049.0	True	False	1560.5747276967545	1833.9019616240878	1424.8277758259103	1524.2232016135615	1882.7433298965268	2056.231741368684	1757.3249890485986	1964.952327055468	1769.9438075587357	1677.9062447840465	0.930072662014323	1.0929704608496278	0.8491700774433267	0.9084078483835283	1.1220789813192713	1.2254747532889299	1.0473320511866702	1.171073969814306	1.0548526254436432	1.0	10.712446390211001	-7.768572634423246	24.987028695157807	1.1153159223092894	0.9488574011614314	0.4599982720445439	0.08340277484944691	140.70052243101986	492857.90248542157	0.025434956661638912	0.029438756527592702	1.7038343344057292e-08	7.768572634423246	-0.16645852114785809	
RVVLGDGVQLPPGDYS(ph)TTPGGTLFS(ph)TTPGGTRIIYDRK	ddPTM_K562_Methotrexat_30min_R1	1	RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK	38	3	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	2	RVVLGDGVQLPPGDY(0.196)S(0.211)T(0.211)T(0.211)PGGT(0.211)LFS(0.241)T(0.241)T(0.241)PGGT(0.177)RIIY(0.06)DRK	46.696000000000005	0.0022247	17037000.0	1013.5	799.74	1270.3	1139.9	790.91	732.96	834.78	713.19	1090.4	1035.0	True	False	968.947753530634	931.883441744289	1003.6813896766254	1039.9667368089233	894.9285280144136	874.594146580621	1022.0006648725018	688.1067034600596	1039.7075419999815	847.5514706449435	1.1432317529852365	1.099500707650443	1.1842129055747788	1.2270248743920669	1.055898737729071	1.031906824390381	1.205827256832923	0.8118760067001541	1.2267190583821617	1.0	9.727157173586443	-7.818394566000215	11.965990119676167	1.0522377367650735	1.1603734010857516	0.18402520615573847	0.11134283087207995	1.2680224812413183	263.1816283233393	0.03277914300563439	0.03718846874477718	1.519166706517519e-08	7.818394566000215	0.10813566432067812	
RVVLGDGVQLPPGDYST(ph)T(ph)PGGTLFSTTPGGTR	ddPTM_K562_Methotrexat_30min_R1	1	RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR	32	1	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	2	RVVLGDGVQLPPGDY(0.359)S(0.392)T(0.398)T(0.402)PGGT(0.169)LFS(0.172)T(0.049)T(0.046)PGGT(0.012)R	56.631	0.0018393	48810000.0	674.54	482.19	521.71	575.08	788.58	367.45	535.59	598.63	912.76	769.25	True	False	644.8880292713903	561.8637016713911	412.2102005889889	524.6636292693	892.2920921743386	438.45451206211726	655.7096912947886	577.5758435932856	870.3259868267637	629.9313708150944	1.023743314191422	0.8919443096545142	0.6543731899803831	0.8328901426046078	1.41649095999103	0.6960353657173523	1.0409224269087258	0.9168869345972344	1.3816203274661694	1.0	9.2990508495333	-8.498330884845723	0.6011379539616356	1.1092249718372371	0.869167092650221	0.10766471224775642	0.2270258606258482	1.9898745534022397	1.521343821220006	0.19900260905192607	0.18053964867763966	3.1744545622508093e-09	8.498330884845723	-0.24005787918701615	
RVVLGDGVQLPPGDYST(ph)TPGGTLFS(ph)TTPGGTR	ddPTM_K562_Methotrexat_30min_R1	2	RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR	32	1	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	2	RVVLGDGVQLPPGDY(0.01)S(0.012)T(0.492)T(0.492)PGGT(0.098)LFS(0.295)T(0.295)T(0.296)PGGT(0.011)R;RVVLGDGVQLPPGDY(0.1)S(0.109)T(0.379)T(0.379)PGGT(0.106)LFS(0.286)T(0.286)T(0.286)PGGT(0.07)R	73.753	6.4848e-06	72584000.0	2574.17	2418.1400000000003	2858.58	2746.0699999999997	2358.3900000000003	2430.08	2343.6800000000003	3047.88	3194.88	3546.07	True	False	2461.0125690241275	2817.696533647854	2258.603122807059	2505.326306648723	2668.5596226927364	2899.658567619837	2869.309899911818	2940.684332845172	3046.3507261416917	2903.842360879145	0.847502124143905	0.9703338485615278	0.7777981178438563	0.8627625040535016	0.9189753750561115	0.9985592216314244	0.9881080111535833	1.0126873181762088	1.049075792536962	1.0	11.503747421414882	-8.143335564438917	2.226297058813185	1.0125131616340464	0.8661630842456831	0.6909997134148348	0.04605779258965171	0.18768103221648896	1.8277518941935258	0.01751288643336971	0.01745165524855364	7.188932991782561e-09	8.143335564438917	-0.14635007738836325	
RVVLGDGVQLPPGDYSTT(ph)PGGT(ph)LFSTTPGGTR	ddPTM_K562_Methotrexat_30min_R1	1	RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR	32	1	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	2	RVVLGDGVQLPPGDY(0.105)S(0.125)T(0.268)T(0.498)PGGT(0.316)LFS(0.355)T(0.131)T(0.131)PGGT(0.073)R	46.668	0.017016	12171000.0	737.16	703.06	775.5	785.6	519.09	644.3	566.19	681.72	782.49	629.62	True	False	704.7553290504612	819.2287150233068	612.7331478345453	716.7276677226857	587.3594335727228	768.8018563658236	693.1725202378615	657.7435211974259	746.1122106929253	515.589716857458	1.3668917474653606	1.5889159310944792	1.1884122739475502	1.3901124174686268	1.1391992787457135	1.4911116944917069	1.3444265810085942	1.2757110929333533	1.4471045218677205	1.0	9.010079680032296	-12.22899807890089	3.9147226220479348	0.999660733212181	1.3562807614114631	0.4146382369061241	0.12796125371612554	14548081.601162229	9089298.252322452	39285.18376644812	0.029888350716433087	5.902036909286574e-13	12.22899807890089	0.3566200281992822	
RVVLGDGVQLPPGDYSTT(ph)PGGTLFS(ph)TTPGGTR	ddPTM_K562_Methotrexat_30min_R1	1	RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR	32	1	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	2	RVVLGDGVQLPPGDY(0.074)S(0.077)T(0.317)T(0.476)PGGT(0.119)LFS(0.28)T(0.28)T(0.28)PGGT(0.098)R	53.091	0.007235500000000001	13315000.0	496.76	462.57	553.79	612.91	515.52	395.8	386.41	352.93	483.91	419.14	True	False	474.9230252036292	539.0018301543694	437.5570469881279	559.1771319041643	583.3199159980152	472.28274833089114	473.0722788200286	340.5172518573719	461.4131297223141	343.2296844503592	1.3836886688986734	1.57038232581053	1.2748228571454203	1.6291630859365176	1.6995031095056112	1.3759962198117999	1.3782965176150095	0.9920973251560951	1.3443275760405498	1.0	8.42303052046	-8.977647023701017	2.322427450028997	1.125801946469043	1.5031241448955297	0.5498162362025865	0.15083021524125462	0.23449098064286183	2.5265031799607827	0.08071557663767104	0.04478329908597064	1.052817211758501e-09	8.977647023701017	0.37732219842648673	
RVVLGDGVQLPPGDYSTT(ph)PGGTLFSTT(ph)PGGTR	ddPTM_K562_Methotrexat_30min_R1	1	RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR	32	1	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	2	RVVLGDGVQLPPGDY(0.047)S(0.07)T(0.29)T(0.586)PGGT(0.052)LFS(0.222)T(0.258)T(0.411)PGGT(0.063)R	77.874	8.8065e-06	116970000.0	3671.8	3275.7	3032.6	3700.9	3455.6	2930.5	2982.8	4390.4	4486.4	4507.8	True	False	3510.392068489179	3816.9537476201826	2396.0987029310663	3376.4478430179342	3910.0719695118364	3496.7776502872084	3651.768829130668	4235.987143497589	4277.828243239834	3691.3937385249064	0.9509665771638719	1.0340142553163267	0.6491040708891043	0.9146810343691958	1.0592400178568635	0.9472784259759114	0.98926559662799	1.147530565295455	1.158865335495007	1.0	11.849949913960938	-8.576458213217267	0.9960635475326424	1.1065760649729617	0.8946210327144501	0.3300630934780959	0.11137405297001506	0.6424563119270809	1.3020343305868538	0.07858883475296605	0.05287782753128089	2.6518062312268575e-09	8.576458213217267	-0.21195503225851153	
RVVLGDGVQLPPGDYSTT(ph)PGGTLFSTTPGGTR	ddPTM_K562_Methotrexat_30min_R1	1	RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR	32	1	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	1	RVVLGDGVQLPPGDY(0.005)S(0.016)T(0.074)T(0.718)PGGT(0.1)LFS(0.028)T(0.028)T(0.023)PGGT(0.008)R	68.763	5.1711999999999995e-05	20261000.0	967.13	827.42	1035.1	1230.1	896.48	741.27	952.05	1508.5	1379.6	1509.3	True	False	924.6161232087645	964.137091264735	817.8466554784499	1122.2590428534575	1014.3828334378902	884.5099364710455	1165.5714475572786	1455.445199974061	1315.4626971232335	1235.9511445839746	0.7481008673040984	0.7800770244759689	0.6617143881959346	0.9080124629288755	0.8207305263504853	0.7156512135184555	0.9430562467334531	1.1775912068627672	1.0643322779283664	1.0	10.271406001319052	-8.98109446909068	4.2628517829665675	1.088541746572631	0.7772214204201009	0.7813013870719889	0.07352953198821185	0.09060355673678294	3.884205343967445	0.03384665733643621	0.021069422415803712	1.0444929931336022e-09	8.98109446909068	-0.31132032615253014	
RVVLGDGVQLPPGDYSTTPGGTLFSTT(ph)PGGTR	ddPTM_K562_Methotrexat_30min_R1	1	RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR	32	1	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	1	RVVLGDGVQLPPGDY(0.002)S(0.007)T(0.016)T(0.039)PGGT(0.191)LFS(0.14)T(0.14)T(0.323)PGGT(0.14)R	77.358	6.9414999999999995e-06	17786000.0	1363.1	875.63	1170.1	1242.5	1580.1	1401.0	1161.3	1931.3	1626.0	2329.2	True	False	1303.179756129854	1020.3129743348487	924.5120003626075	1133.571954105699	1787.910845880788	1671.7234219595205	1421.7510866532946	1863.3750843287403	1550.4076149045939	1907.3593095905342	0.6832376834177177	0.5349348542797038	0.48470783439386617	0.5943148458740323	0.9373749544151757	0.8764596232884935	0.7454028611727654	0.9769397275905837	0.8128555574761792	1.0	10.897360929747213	-7.7213957867893	6.929077703985195	0.8822772497862544	0.5629066898543036	0.7707555210834056	0.08460790381164186	0.09154851432592469	11.77403005003929	0.024689500087650685	0.031534980817217804	1.8993465542145333e-08	7.7213957867893	-0.31937055993195085	
RWDQTADQT(ph)PGAT(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	RWDQTADQTPGATPK	15	1	O75533	O75533	SF3B1	Splicing factor 3B subunit 1	2	RWDQTADQT(1)PGAT(1)PK	72.77199999999999	0.01626	0.0	2044.4	2807.6	2108.9	3310.2	1268.8	1714.3	1440.1	1887.0	1858.7	2725.3	True	False	1954.5306238954402	3271.5081789597434	1666.270709823692	3019.9999054170507	1435.669439436456	2045.564212894508	1763.0790836901829	1820.6331404382192	1772.2894426956775	2231.721761303057	0.875794939040353	1.4659122098847914	0.7466301304741458	1.3532152429493425	0.6433012682540666	0.9165856821238076	0.7900084653298164	0.8157975478875057	0.7941354847303517	1.0	11.123941455821019	-7.769574579793346	24.99992959988611	0.8200938723369415	1.1098000063163982	0.3014187251938716	0.21148234438509278	209.96019984525506	645217.8984918033	0.059890480018984456	0.06907477579551101	1.6999080096283318e-08	7.769574579793346	0.28970613397945666	
RWDQTADQTPGAT(ph)PK	ddPTM_K562_Methotrexat_30min_R1	3	RWDQTADQTPGATPK	15	1	O75533	O75533	SF3B1	Splicing factor 3B subunit 1	1	RWDQTADQT(0.001)PGAT(0.999)PK;RWDQTADQT(0.005)PGAT(0.995)PK;RWDQTADQT(0.043)PGAT(0.956)PK	214.63	2.5214e-30	66897000.0	6685.3	5312.4	9233.7	6963.9	5557.2	4770.610000000001	4779.9400000000005	7302.2	6041.07	7767.799999999999	True	False	6391.422216752198	6190.183804639456	7295.672555976587	6353.3856991522525	6288.06920620766	5692.462865120849	5851.96322150826	7045.377487073637	5760.2219742753405	6360.976148479028	1.0047863830271475	0.9731499788942912	1.1469422908811024	0.998806716272849	0.9885384034510488	0.8949039789249914	0.91997880276717	1.1075937596084613	0.9055562919619917	1.0	12.635032461572257	-7.51469911108761	22.070193298935084	0.9708878989492525	1.041127877664192	0.1737849128039861	0.07044107264118249	149.62917744128512	403728.296786985	0.02073148629655649	0.028181268318478326	3.0570383641164324e-08	7.51469911108761	0.07023997871493937	
RWIYEDVER	ddPTM_K562_Methotrexat_30min_R1	1	RWIYEDVER	9	1	O43852-13;O43852-14;O43852-11;O43852-10;O43852-5;O43852-6;O43852;O43852-3	O43852-13	CALU	Calumenin	0		99.65299999999999	0.008945100000000001	0.0	702.51	711.35	819.2	613.82	880.21	818.72	816.39	708.73	865.23	866.38	False	True	671.6285015617226	828.8884966174006	647.2611150303804	560.0073536170305	995.9730432584827	976.9260528384723	999.4862392429889	683.8035641880123	825.0056461524615	709.4701866061505	0.946662050416172	1.16832040622102	0.9123161582400582	0.7893317636022222	1.4038264920233767	1.3769797114544506	1.4087783505381255	0.9638228315964649	1.1628475187928489	1.0	9.470598250326704	-7.762504234183134	24.99985098574382	1.2349172708594072	0.9664662755178339	0.3664937548537699	0.1697817644003334	33.53133400802534	787229.2656324073	0.05487420834566439	0.06581212219082237	1.7278091350348798e-08	7.762504234183134	-0.26845099534157324	
RWKDT(ph)RATVGT(ph)T(ph)FR	ddPTM_K562_Methotrexat_30min_R1	1	RWKDTRATVGTTFR	14	3	B2CW77	B2CW77	KLLN	Killin	3	RWKDT(1)RAT(0.315)VGT(0.858)T(0.827)FR	69.422	0.018593000000000002	19732000.0	386.41	492.03	446.03	471.93	414.7	399.03	354.62	359.68	413.63	534.74	True	False	369.4238790742698	573.3295944199891	352.41439836059635	430.5566296185938	469.24031883220215	476.13690011742153	434.1525620847247	347.0298505314353	394.40043158240303	437.8934042634562	0.8436388296271481	1.3092903177757125	0.8047949453665855	0.983245295376844	1.0715857198659384	1.0873351721711624	0.991457185373633	0.7924984645867071	0.9006768034010262	1.0	8.774435909243145	-9.063368347388302	8.503537987568757	0.8857600005791357	1.0228004023042943	0.12665302355786867	0.13848684039482675	0.670280131317352	84.3206782122783	0.06241264545129937	0.03607891833007195	8.642346062167223e-10	9.063368347388302	0.13704040172515852	
RWNFEQIS(ph)FPNMASDS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	RWNFEQISFPNMASDSR	17	1	Q7Z6J9	Q7Z6J9	TSEN54	tRNA-splicing endonuclease subunit Sen54	2	RWNFEQIS(1)FPNMAS(0.019)DS(0.981)R	70.45100000000001	0.021927000000000002	30763000.0	174.9	188.89	127.67	124.23	189.64	195.22	65.075	160.37	168.5	298.92	True	False	167.21160541934682	220.10086191897207	100.87381171378009	113.3389487795179	214.58098399647656	232.9435020948878	79.66972527681314	154.72969620141868	160.6664717782437	244.78269140597743	0.683102242478504	0.8991684038391832	0.41209536154040677	0.4630186396289874	0.8766182885071286	0.9516338788372334	0.3254712366270994	0.6321104458517294	0.6563636948977526	1.0	7.935357738387024	-12.573875016480823	2.455734546488725	1.0310257735120512	0.6546724222294891	0.20970298146312372	0.2006222173273788	8435669.769244984	7259002.728129481	1701050.101786952	0.05395335001302851	2.6676262573895877e-13	12.573875016480823	-0.3763533512825621	
RWPS(ph)MNQEGGPHR	ddPTM_K562_Methotrexat_30min_R1	1	RWPSMNQEGGPHR	13	1	A3QK36	A3QK36	CAPN8		1	RWPS(1)MNQEGGPHR	65.495	0.028366000000000002	0.0	143.03	208.83	184.87	0.0	0.0	63.919	0.0	64.921	67.426	128.12	True	False	136.74257245928632	243.33560799692373	146.06831339803023	0.0	0.0	76.2704421186514	0.0	62.63769163242689	64.29137997697246	104.91622649181657	1.3033500825532665	2.319332443927573	1.3922375811850562	0.0	0.0	0.7269651670573614	0.0	0.597025776916525	0.6127877653128058	1.0	6.713094014199714	-7.097011142989854	4.670187373132437	0.3858091876724955	1.8240293236903466	0.6829730057186063	0.39629489029217474	0.11126533257971896	3.9885864579399217	0.10456771040818669	0.19028357394370535	7.998137333770674e-08	7.097011142989854	1.438220136017851	
RY(ph)SPDELR	ddPTM_K562_Methotrexat_30min_R1	3	RYSPDELR	8	1	S5FZ81;Q8WUB8-3;Q8WUB8-2;Q8WUB8	S5FZ81	PHF10	PHD finger protein 10	1	RY(0.831)S(0.169)PDELR;RY(0.568)S(0.432)PDELR;RY(0.929)S(0.071)PDELR	72.87899999999999	0.023073	35873100.0	3495.6900000000005	3398.6	3915.9	3636.1	3358.98	3295.4	3456.9799999999996	3348.16	4113.0	3845.8	True	False	3342.0236532210215	3960.1608836773703	3094.006103939777	3317.328758409441	3800.7447459633286	3932.189410938905	4232.295764693619	3230.403315044844	3921.787527738376	3149.2883534360612	1.0611996356493283	1.2574780201871953	0.9824461137590123	1.0533582149726104	1.2068582865130433	1.2485961809907473	1.3438895679641187	1.0257566003825218	1.2452932496509797	1.0	11.620810143445853	-4.655209105388198	10.811297764427913	1.149805849796637	0.27754945820353216	0.0	0.12425241935139172	0.0	0.0	0.028319355068810864	0.0	2.2120293987219207e-05	4.655209105388198	-0.8722563915931049	
RY(ph)TMSRS(ph)LDGAEFS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	RYTMSRSLDGAEFSR	15	2	A0A0C4DH22;A0A1B0GTW6;Q9H4G0-4;Q9H4G0-3;Q9H4G0-2;Q9H4G0	A0A0C4DH22	EPB41L1	Band 4.1-like protein 1	3	RY(0.902)T(0.098)MS(0.12)RS(0.88)LDGAEFS(1)R	79.32600000000001	0.012088	32773000.0	3110.5	3503.8	4633.0	3850.8	3536.4	3700.0	2645.4	2822.5	2336.4	2496.8	True	False	2973.7661444075375	4082.743395583111	3660.596613691103	3513.206342752696	4001.498585768507	4414.972634725359	3238.6982903923376	2723.23107519177	2227.781273962544	2044.6053255133274	1.4544450742154509	1.9968369174417953	1.790368325863603	1.7182809312455718	1.9571007352061325	2.1593275629451454	1.5840212533825893	1.3319103893598945	1.0895898813152254	1.0	10.997606668231603	-9.326906318600468	1.9872150874016379	1.0557302023411075	1.8482169339986527	0.7514340867210374	0.1839450573370347	0.17303402940835216	1.2604335923984704	0.14081633974630856	0.05388774937579081	4.71078931588846e-10	9.326906318600468	0.7924867316575452	
RYEPYGMYS(ph)DDDANSDASSVCSER	ddPTM_K562_Methotrexat_30min_R1	2	RYEPYGMYSDDDANSDASSVCSER	24	1	H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-4;Q7Z460-5;Q7Z460-3;Q7Z460	H0Y5T1;Q7Z460	CLASP1	CLIP-associating protein 1	1	RY(0.002)EPY(0.03)GMY(0.427)S(0.54)DDDANSDASSVCSER;RY(0.002)EPY(0.008)GMY(0.458)S(0.532)DDDANSDASSVCSER	98.376	1.1320000000000001e-06	35806000.0	1275.24	959.99	1526.0700000000002	1275.7800000000002	1133.47	1108.33	964.2	1124.4099999999999	1169.42	1381.3400000000001	True	False	1219.1819765292616	1118.612030460024	1205.7687619804835	1163.934348176232	1282.5411723818092	1322.499086552745	1180.4463943435003	1084.8638629783445	1115.0539194475593	1131.1659405417263	1.0778100125127386	0.9889017962513174	1.0659521461572907	1.0289687007538546	1.1338223035318655	1.16914684146111	1.0435660693409607	0.9590669450839306	0.9857562710149753	1.0	10.143594870962255	-9.089085745102865	5.264164541555186	0.98105728978952	1.0756780018099388	0.44341489974190085	0.04785281495726925	0.23642955098208385	10.566828844032214	0.02552888179598904	0.014602348223269083	8.14543448436023e-10	9.089085745102865	0.09462071202041877	
RYES(ph)YGMHSDDDANSDASSACSER	ddPTM_K562_Methotrexat_30min_R1	1	RYESYGMHSDDDANSDASSACSER	24	1	E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3;A0A0U1RQI6;H7C4M5	E3W994	CLASP2	CLIP-associating protein 2	1	RY(0.238)ES(0.261)Y(0.238)GMHS(0.261)DDDANS(0.001)DASSACSER	50.426	0.011529000000000001	22503000.0	376.0	436.37	444.71	380.65	407.02	312.87	309.09	306.48	519.92	419.21	True	False	359.47149020968783	508.4727254782248	351.37144832172885	347.27900549725086	460.5502642177066	373.327699520682	378.41130058870783	295.70092468548245	495.7490326821629	343.2870067720451	1.047145633590466	1.4811883801237746	1.0235500947900777	1.0116287498403824	1.3415895595592073	1.08750897108257	1.1023175742855496	0.8613810568188457	1.4441240795675032	1.0	8.423271442874496														
RYESYGMHS(ph)DDDANSDASSACSER	ddPTM_K562_Methotrexat_30min_R1	2	RYESYGMHSDDDANSDASSACSER	24	1	E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3;A0A0U1RQI6;H7C4M5	E3W994	CLASP2	CLIP-associating protein 2	1	RY(0.019)ES(0.23)Y(0.195)GMHS(0.557)DDDANSDASSACSER;RY(0.011)ES(0.109)Y(0.091)GMHS(0.789)DDDANSDASSACSER	71.289	0.00064794	27572100.0	4115.2	3548.8	5373.5	4517.5	3481.7	3355.8	3302.7	3727.7	3739.6	4169.3	True	False	3934.3007354013503	4135.178880713897	4245.675783222349	4121.457788871221	3939.6045769907855	4004.260856111179	4043.4145473950175	3596.5946781195257	3565.746812236915	3414.199368656971	1.1523347967078355	1.2111708878736438	1.2435348158629802	1.2071520564109475	1.1538882624011764	1.1728257268368947	1.184293625180289	1.0534225713755851	1.0443874030823097	1.0	11.73733159017908	-9.368138734265749	1.5253873685772874	1.0081731748020946	1.195881344791928	0.8639026451157288	0.028543319387340022	0.14842996255356566	0.6102901823343057	0.025629809977373352	0.009178578456227599	4.2841164352810185e-10	9.368138734265749	0.18770816998983353	
RYGLLANTEDPTEMASLDS(ph)DEETVFESR	ddPTM_K562_Methotrexat_30min_R1	4	RYGLLANTEDPTEMASLDSDEETVFESR	28	1	Q9BVV8	Q9BVV8	C19orf24	Uncharacterized membrane protein C19orf24	1	RYGLLANTEDPTEMAS(0.334)LDS(0.586)DEET(0.08)VFESR;RYGLLANTEDPTEMAS(0.164)LDS(0.801)DEET(0.034)VFES(0.001)R;RYGLLANTEDPTEMAS(0.001)LDS(0.906)DEET(0.091)VFES(0.002)R;RYGLLANTEDPTEMAS(0.011)LDS(0.954)DEET(0.03)VFES(0.005)R	97.95700000000001	5.9209e-08	78430000.0	2997.98	2589.34	3224.19	3071.45	2655.6	2446.64	2141.35	3039.0	3340.56	3675.8100000000004	True	False	2866.1923888798947	3017.1844237454143	2547.4765801633325	2802.1807472337628	3004.8579471685475	2919.4185532498514	2621.60224696894	2932.116647478404	3185.258094739049	3010.0851896728395	0.9521964357398854	1.0023584827754812	0.8463137817173251	0.9309307114787427	0.9982634237322499	0.9698790463691686	0.870939552130708	0.9740975629321276	1.0581953313704215	1.0	11.555588602537219	-9.550875037301166	7.268145753198627	1.0258117091039622	0.9394881397569016	0.3526222531916471	0.04864871957872695	0.22031298428916196	41.231291378300625	0.033441993046770646	0.01272075822914847	2.812710035417794e-10	9.550875037301166	-0.08632356934706065	
RYPSSISSS(ph)PQK	ddPTM_K562_Methotrexat_30min_R1	3	RYPSSISSSPQK	12	1	F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5	F8W726	UBAP2L	Ubiquitin-associated protein 2-like	1	RYPSSIS(0.001)S(0.222)S(0.777)PQK;RYPS(0.174)S(0.174)IS(0.174)S(0.174)S(0.306)PQK;RYPSSIS(0.001)S(0.1)S(0.898)PQK	112.5	0.0010488	36555000.0	7321.0	6442.599999999999	11136.7	7565.2	6999.200000000001	6464.9	5500.2	7532.6	7645.400000000001	9034.3	True	False	6999.17760591788	7507.130144524165	8799.258862010296	6901.970661730727	7919.71748148144	7714.150428712425	6733.75986119904	7267.674188481674	7289.967022750054	7398.100725843106	0.9460776306367789	1.0147374877311681	1.1893943037667294	0.9329381847452693	1.070506846955492	1.0427203838635626	0.9102011598296593	0.9823702674247424	0.98538358599048	1.0	12.852939227687537	-8.727440061662957	24.998511875976575	0.9680195613130245	1.0362137351469665	0.1631726190273025	0.0698622949928744	321.5292618526964	236408.93471858464	0.026550675190599744	0.020564972282717843	1.8730955769465672e-09	8.727440061662957	0.068194173833942	
RYS(ph)DFEWLR	ddPTM_K562_Methotrexat_30min_R1	2	RYSDFEWLR	9	1	O60493-4;O60493;O60493-3	O60493-4	SNX3	Sorting nexin-3	1	RY(0.003)S(0.997)DFEWLR;RY(0.232)S(0.768)DFEWLR	102.87	0.0049036999999999996	8116800.0	2641.1	2560.75	3105.55	2914.0	2577.79	2367.25	2503.44	3111.7	2970.91	3402.2	True	False	2525.000406363847	2983.8704121923215	2453.737494851802	2658.5341442768663	2916.8145683203848	2824.6875593388118	3064.900146707414	3002.2597472716493	2832.7930425560935	2786.028612007949	0.9063081389332992	1.0710121207412093	0.8807294671260902	0.9542379187415471	1.04694350795564	1.0138760051365734	1.100096436015593	1.077612675739126	1.0167853375039249	1.0	11.443994358893434	-7.76263946020767	23.912449203577697	1.0478763703116178	0.9563288731994449	0.39260138409116807	0.05422254245410045	18.807584996243822	374762.79204220086	0.016170445309640007	0.019387174399977662	1.7272712318399747e-08	7.76263946020767	-0.09154749711217292	
RYS(ph)GDSDSSASSAQSGPLGTR	ddPTM_K562_Methotrexat_30min_R1	2	RYSGDSDSSASSAQSGPLGTR	21	1	A0A5E8;Q99501	A0A5E8	GAS2L1	GAS2-like protein 1	1	RYS(0.944)GDS(0.056)DSSASSAQSGPLGTR;RY(0.026)S(0.95)GDS(0.021)DSS(0.001)AS(0.001)S(0.001)AQSGPLGTR	190.96	1.2618e-19	22609000.0	1598.18	1365.17	2264.0	1827.6100000000001	1412.48	1634.1	1916.5500000000002	1979.43	1814.04	1968.7199999999998	True	False	1527.9259208066997	1590.741138577601	1788.8173393906013	1667.3862688475792	1598.2458778493103	1949.866697947218	2346.3851245374753	1909.8123249483963	1729.7056763478047	1612.165730713153	0.9477474255272818	0.9867106763731577	1.109574099803812	1.0342523954469613	0.9913657432367794	1.20947037937885	1.4554242655310228	1.1846253077861773	1.0729081033019212	1.0	10.654784345269828	-8.267356822868056	23.62690909196422	1.2129583833331101	1.0188604518676379	0.32887682737379864	0.11827193186673424	249.37210320061385	995677.2209406745	0.04215131493821814	0.03821952583638155	5.403102135418965e-09	8.267356822868056	-0.19409793146547227	
RYS(ph)PDELR	ddPTM_K562_Methotrexat_30min_R1	1	RYSPDELR	8	1	S5FZ81;Q8WUB8-3;Q8WUB8-2;Q8WUB8	S5FZ81	PHF10	PHD finger protein 10	1	RY(0.397)S(0.603)PDELR	82.505	0.02118	8072300.0	836.61	655.47	824.28	915.62	681.35	671.85	737.83	873.65	777.96	855.42	True	False	799.8336261285294	763.7752764149958	651.2748924526877	835.3490161917586	770.9594676544996	801.67550395682	903.3071594466542	842.9232343104663	741.7928094041689	700.4951488107221	1.1418117991059054	1.0903362824306617	0.9297350503545971	1.1925122074149792	1.100592158223236	1.1444411932300724	1.2895266455167602	1.2033248706169544	1.0589549558816513	1.0	9.45223124926601	-7.3182971667927434	24.999318995690913	1.1544142182186168	1.057597009309952	0.15196471305773995	0.09086490079563325	453.26884247644847	199292.87125617487	0.02576718792119674	0.038218925790399594	4.805104457859654e-08	7.3182971667927434	-0.09681720890866474	
RYVEPPEMIGPMRPEQFS(ph)DEVEPATPEEGEPATQR	ddPTM_K562_Methotrexat_30min_R1	1	RYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQR	35	2	Q9UEU5;Q6NT46;Q13066;Q4V321	Q9UEU5	GAGE2D;GAGE2A;GAGE2B;GAGE13	G antigen 2D;G antigen 2A;G antigen 2B/2C;G antigen 13	1	RYVEPPEMIGPMRPEQFS(0.992)DEVEPAT(0.008)PEEGEPATQR	73.107	3.2219e-08	24379000.0	0.0	185.15	212.52	151.55	111.01	151.9	194.45	124.87	176.87	163.99	True	False	0.0	215.7428904881024	167.9149562576372	138.26384679655425	125.60976077541063	181.2525251931844	238.06036235230596	120.47825132301024	168.6473523051511	134.28982190440996	0.0	1.6065468508973992	1.250392277511264	1.0295928971815382	0.9353632240634144	1.3497115613289246	1.7727357068189564	0.8971510246604463	1.2558461238052536	1.0	7.069206153925932	-8.263535624596843	24.592361355010507	1.2810137511457085	1.0195676539398897	0.09129304757906476	0.43794934729666696	436.6120844835729	5122136.629314459	0.14853210862538482	0.13744166488205195	5.450851812449282e-09	8.263535624596843	-0.2614460972058188	
RYVEPPEMIGPMRPEQFSDEVEPAT(ph)PEEGEPATQR	ddPTM_K562_Methotrexat_30min_R1	3	RYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQR	35	2	Q9UEU5;Q6NT46;Q13066;Q4V321	Q9UEU5	GAGE2D;GAGE2A;GAGE2B;GAGE13	G antigen 2D;G antigen 2A;G antigen 2B/2C;G antigen 13	1	RY(0.011)VEPPEMIGPMRPEQFS(0.198)DEVEPAT(0.79)PEEGEPAT(0.001)QR;RY(0.002)VEPPEMIGPMRPEQFS(0.129)DEVEPAT(0.868)PEEGEPAT(0.001)QR;RY(0.002)VEPPEMIGPMRPEQFS(0.01)DEVEPAT(0.982)PEEGEPAT(0.006)QR	50.341	0.0037580999999999995	389854000.0	2001.94	1705.0500000000002	2162.88	2057.27	1765.87	1786.6599999999999	1607.28	2013.1000000000001	2303.3599999999997	2162.2	True	False	1913.937114655272	1986.7805316053953	1708.9210455040381	1876.9123332177305	1998.1128570441788	2131.9067587995705	1967.7534543667507	1942.298131964058	2196.2772963509506	1770.60462785362	1.0809511533782694	1.1220915727605605	0.9651624188826635	1.060040340848414	1.128491830198338	1.204055792728799	1.1113454824480609	1.0969688553895682	1.2404109092459246	1.0	10.79002638206256	-7.773405802771391	5.348005250030005	1.138375186121131	1.054631028017181	0.20149589328492934	0.07042508970780628	0.2549118796625875	21.452999778403846	0.021175959434979234	0.025418487840399042	1.684977854010614e-08	7.773405802771391	-0.0837441581039502	
RYVQPPEMIGPMRPEQFS(ph)DEVEPATPEEGEPATQR	ddPTM_K562_Methotrexat_30min_R1	2	RYVQPPEMIGPMRPEQFSDEVEPATPEEGEPATQR	35	2	P0DTW1;P0DSO3;P0CL80-2;Q4V326;P0CL82;P0CL81;P0CL80;O76087	P0DTW1	GAGE12F;GAGE2E;GAGE12I;GAGE12G;GAGE7	G antigen 12F;G antigen 2E;G antigen 12I;G antigen 12G;G antigen 7	1	RY(0.161)VQPPEMIGPMRPEQFS(0.834)DEVEPAT(0.005)PEEGEPATQR;RYVQPPEMIGPMRPEQFS(0.999)DEVEPAT(0.001)PEEGEPATQR	96.61	5.381300000000001e-13	167026000.0	751.22	786.0699999999999	1071.79	812.78	800.4399999999999	780.64	813.1400000000001	808.22	601.55	732.21	True	False	718.1972682854298	915.9547065945594	846.8359258769664	741.524839322358	905.7118900555773	931.4876317762179	995.507344012106	779.7944444965432	573.5840717994209	599.5996737400327	1.1977946282152536	1.527610415264649	1.4123355347990523	1.2366998712608699	1.5105276565715162	1.5535159083159895	1.660286667273482	1.3005251314306705	0.9566117143154229	1.0	9.227855788047547	-9.64798292735695	4.002582959199102	0.9779450058397315	1.4458697451991647	0.6518224992440832	0.13358519789600012	0.13829680911068684	3.908896127052307	0.10852112810072606	0.0358742294852623	2.2491430206391443e-10	9.64798292735695	0.46792473935943313	
RYVQPPEMIGPMRPEQFSDEVEPAT(ph)PEEGEPATQR	ddPTM_K562_Methotrexat_30min_R1	5	RYVQPPEMIGPMRPEQFSDEVEPATPEEGEPATQR	35	2	P0DTW1;P0DSO3;P0CL80-2;Q4V326;P0CL82;P0CL81;P0CL80;O76087	P0DTW1	GAGE12F;GAGE2E;GAGE12I;GAGE12G;GAGE7	G antigen 12F;G antigen 2E;G antigen 12I;G antigen 12G;G antigen 7	1	RYVQPPEMIGPMRPEQFS(0.002)DEVEPAT(0.998)PEEGEPATQR;RY(0.001)VQPPEMIGPMRPEQFS(0.027)DEVEPAT(0.969)PEEGEPAT(0.003)QR;RYVQPPEMIGPMRPEQFS(0.346)DEVEPAT(0.654)PEEGEPATQR;RY(0.003)VQPPEMIGPMRPEQFS(0.118)DEVEPAT(0.878)PEEGEPAT(0.001)QR;RYVQPPEMIGPMRPEQFS(0.001)DEVEPAT(0.998)PEEGEPAT(0.001)QR	77.233	2.2774e-08	1240834000.0	2676.69	2534.1839999999997	3156.8	3230.6	2479.02	2330.0699999999997	2152.65	2809.83	2776.01	2804.76	True	False	2559.0259125781113	2952.9148322371125	2494.230820224493	2947.378313830076	2805.0545820868238	2780.3230505390598	2635.4365596178536	2711.0066862731937	2646.9539010155613	2296.790785319914	1.1141745817400044	1.2856699230556208	1.085963439145842	1.2832593776796886	1.2212930320060105	1.210525167686005	1.1474430220037524	1.1803455080021947	1.1524575585785772	1.0	11.165403732266906	-10.668643046709109	0.6943023367163483	0.995491667321301	1.2005720552166663	0.4707110308277206	0.06106297172745925	1.9761906645087053	1.3912439340589233	0.07760046540732261	0.021544678810088595	2.144652599755784e-11	10.668643046709109	0.2050803878953653	
RYVQPPEMIGPMRPEQFSDEVEPATPEEGEPATQR	ddPTM_K562_Methotrexat_30min_R1	1	RYVQPPEMIGPMRPEQFSDEVEPATPEEGEPATQR	35	2	P0DTW1;P0DSO3;P0CL80-2;Q4V326;P0CL82;P0CL81;P0CL80;O76087	P0DTW1	GAGE12F;GAGE2E;GAGE12I;GAGE12G;GAGE7	G antigen 12F;G antigen 2E;G antigen 12I;G antigen 12G;G antigen 7	0		57.483999999999995	0.00054933	7344000.0	234.71	104.36	363.38	328.99	179.86	146.1	230.76	263.54	229.47	243.26	False	True	224.3924294338187	121.60371618330203	287.11150388151805	300.14795748992674	203.51474257333	174.33175727929054	282.51380414717477	254.2711488241061	218.80198978607467	199.2032567624048	1.1264496026862538	0.6104504422251595	1.4412992465477803	1.5067422208258445	1.0216436512183515	0.8751451161625375	1.418218801935235	1.2764407216865048	1.0983856054474341	1.0	7.638097423910451	-6.764599504856682	24.999961273502823	1.2147077218427134	0.8684500502588045	0.2546795378343477	0.2296062418333005	101.20435971191816	800662.2913966769	0.061040148230353634	0.13621895847613397	1.7194933285424944e-07	6.764599504856682	-0.34625767158390885	
RYVQPPEVIGPMRPEQFS(ph)DEVEPATPEEGEPATQR	ddPTM_K562_Methotrexat_30min_R1	1	RYVQPPEVIGPMRPEQFSDEVEPATPEEGEPATQR	35	2	Q13070;Q13069	Q13070	GAGE6;GAGE5	G antigen 6;G antigen 5	1	RY(0.003)VQPPEVIGPMRPEQFS(0.864)DEVEPAT(0.133)PEEGEPATQR	60.196999999999996	0.00055382	37190000.0	168.23	221.42	286.77	203.59	204.55	165.45	151.78	139.57	190.72	120.94	True	False	160.83481063291427	258.00589150351425	226.58089594392357	185.74158079386658	231.4519103378998	197.42087092305698	185.82052865946517	134.6612439909709	181.85346882816992	99.0365940674391	1.6239937585433684	2.605157153605513	2.287850244422107	1.8754843352890913	2.33703422979482	1.9934133719160716	1.876281493817633	1.3597119858471016	1.836224988758565	1.0	6.629889795076583	-9.695844022077837	0.5425755820196203	1.0215136305534447	2.2128307876815527	0.5727783840569394	0.2942405623499841	0.5609134343685033	0.406251297426381	0.29745664589252147	0.15552867682260324	2.0144476137281793e-10	9.695844022077837	1.191317157128108	
RYVQPPEVIGPMRPEQFSDEVEPAT(ph)PEEGEPATQR	ddPTM_K562_Methotrexat_30min_R1	3	RYVQPPEVIGPMRPEQFSDEVEPATPEEGEPATQR	35	2	Q13070;Q13069	Q13070	GAGE6;GAGE5	G antigen 6;G antigen 5	1	RY(0.001)VQPPEVIGPMRPEQFS(0.007)DEVEPAT(0.99)PEEGEPAT(0.002)QR;RYVQPPEVIGPMRPEQFS(0.03)DEVEPAT(0.97)PEEGEPATQR;RYVQPPEVIGPMRPEQFS(0.002)DEVEPAT(0.994)PEEGEPAT(0.004)QR	60.363	0.00034559	197413000.0	2161.77	1634.3899999999999	2369.43	2433.45	1803.75	1725.59	1641.74	1895.68	2372.12	2212.4700000000003	True	False	2066.741179230311	1904.4451676200356	1872.1190231767987	2220.1132166748607	2040.9747410021332	2059.0358456096583	2009.9419865686536	1829.0078599183485	2261.840658959095	1811.7702437273601	1.1407302809976603	1.0511515873569128	1.033309289441294	1.225383419537466	1.1265085890820405	1.1364773501156515	1.109380173080663	1.0095142395955932	1.2484147296214578	1.0	10.823184298958196	-12.538113191382802	3.0873188284009148	0.99566306368137	1.1157156948587934	0.19437004643371514	0.07286119275843285	21635523.89575314	23506933.68747938	771946.0055396447	0.017654880157997432	2.8965885433553883e-13	12.538113191382802	0.12005263117742337	
RYWEEETVPTTAGAS(ph)PGPPR	ddPTM_K562_Methotrexat_30min_R1	4	RYWEEETVPTTAGASPGPPR	20	1	O15213	O15213	WDR46	WD repeat-containing protein 46	1	RYWEEETVPT(0.01)T(0.005)AGAS(0.985)PGPPR;RYWEEETVPTT(0.003)AGAS(0.997)PGPPR;RYWEEETVPT(0.003)T(0.171)AGAS(0.826)PGPPR;RYWEEETVPT(0.02)T(0.012)AGAS(0.968)PGPPR	147.26	5.784e-13	418005000.0	4718.4400000000005	4049.57	4953.28	4881.389999999999	4349.83	4135.94	4905.59	5389.62	5429.7699999999995	6220.35	True	False	4511.023027300533	4718.692611579286	3913.6542185762714	4453.446117546894	4921.908888511885	4935.151869963782	6005.793432511436	5200.064009734306	5177.3411778477985	5093.784338576111	0.8855936426553779	0.9263628567554009	0.7683195750824177	0.874290276449314	0.9662578078222545	0.9688576394153601	1.179043523108845	1.020864580063455	1.0164036860844103	1.0	12.314522164522904	-8.086501043554158	1.8701515658874632	1.0523121053095776	0.8614181853995017	0.6284901277159848	0.06314753519096107	0.22292558906953122	1.5529918660782744	0.024896591752051795	0.025766355023226405	8.194056542508064e-09	8.086501043554158	-0.19089391991007598	
RYYRQHCTLELGSY(ph)IK	ddPTM_K562_Methotrexat_30min_R1	1	RYYRQHCTLELGSYIK	16	2	I3L1D9;I3L3K5;I3L4B2;O95476;I3L2R5	I3L1D9	CTDNEP1	CTD nuclear envelope phosphatase 1	1	RY(0.001)YRQHCT(0.001)LELGS(0.196)Y(0.801)IK	44.44	0.033255	10784000.0	1564.6	1813.4	1216.3	1549.7	1646.2	1823.0	1867.0	1787.8	1778.5	1586.0	True	False	1495.8220573991418	2113.033527470295	961.0152517229634	1413.8402070644681	1862.7041544769029	2175.2689494876563	2285.722275709722	1724.9220606653134	1695.8179231905415	1298.7600313457788	1.1517308981622778	1.6269622381901943	0.7399482803048356	1.0886077280954227	1.4342173377069232	1.6748813460432999	1.7599265611378956	1.328129923183688	1.3057207507635804	1.0	10.342919176903735	-7.804166333752859	7.515011812484642	1.4647752922703876	1.15649388846203	0.16416663384393348	0.28133128396177853	0.35616634403252606	51.6891164017913	0.08934991975141468	0.10240316707465529	1.5697614742786202e-08	7.804166333752859	-0.30828140380835767	
S(ph)AGALEEGTSEGQLCGR	ddPTM_K562_Methotrexat_30min_R1	1	SAGALEEGTSEGQLCGR	17	0	H7BXQ8;C9J5N7;Q8N2F6-3;Q8N2F6	H7BXQ8	ARMC10	Armadillo repeat-containing protein 10	1	S(1)AGALEEGTSEGQLCGR	82.94200000000001	0.012825999999999999	33776000.0	768.38	583.29	1046.0	985.78	635.65	564.01	671.05	997.67	665.45	902.8	True	False	734.6029352322341	679.6687582652188	826.458894435764	899.3581979221854	719.2491166281392	672.9969501922836	821.5500445179481	962.5813806152605	634.513374746779	739.2941716891354	0.9936544387382593	0.919348189520168	1.1179026239953647	1.2165092494471268	0.9728862260401737	0.9103236248361377	1.1112627097287604	1.3020275520581472	0.8582691424403445	1.0	9.53000472950423														
S(ph)AGEEEDGPVLTDEQK	ddPTM_K562_Methotrexat_30min_R1	2	SAGEEEDGPVLTDEQK	16	0	F5H7X4;Q66PJ3-7;F5GYV5;H7BZV4;A0A0C4DG62;F8WCT1;Q66PJ3-4;Q66PJ3-3;Q66PJ3-2;Q66PJ3	F5H7X4;Q66PJ3	ARL6IP4	ADP-ribosylation factor-like protein 6-interacting protein 4	1	S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK	339.61	0.0	66829000.0	5415.700000000001	3561.5	7209.7	5658.1	3176.8999999999996	3036.9	2852.0	3785.0	4148.4	5428.9	True	False	5177.632312576083	4149.977339850807	5696.482496380046	5162.0631577669665	3594.7180344779927	3623.7379444317394	3491.6335995308673	3651.879404641578	3955.541789465079	4445.673602883413	1.164645175304352	0.933486735769171	1.2813541895395497	1.1611430840129404	0.8085879341538929	0.8151156085956073	0.7854003490643654	0.821445686492371	0.8897508325621476	1.0	12.118186315620953	-7.761367157841322	24.999999770856647	0.8391431189000786	1.1311949276020465	0.6616221967553044	0.09838733885427953	1.1394703973011444	394275.9399046093	0.029591311994959048	0.035787456561851755	1.732338838169359e-08	7.761367157841322	0.2920518087019679	
S(ph)AGIT(ph)GMS(ph)HRARPHGIS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SAGITGMSHRARPHGISR	18	2	Q8N976	Q8N976		Putative uncharacterized protein FLJ38264	4	S(1)AGIT(1)GMS(1)HRARPHGIS(1)R	47.726000000000006	0.031969	0.0	0.0	111.13	0.0	70.533	70.108	198.57	0.0	142.37	0.0	0.0	True	False	0.0	129.49234361297775	0.0	64.3494813995471	79.32843084805411	236.940842183085	0.0	137.36276640391577	0.0	0.0											0.0														
S(ph)AHATAPVNIAGSR	ddPTM_K562_Methotrexat_30min_R1	1	SAHATAPVNIAGSR	14	0	Q9UQ35	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	S(0.999)AHAT(0.001)APVNIAGSR	109.55	0.0019517	8846100.0	70.987	264.96	233.97	244.68	247.33	201.53	271.65	229.81	167.56	371.84	True	False	67.86649647743378	308.74013645005476	184.86289438923106	223.22928429020715	279.8582301827069	240.47282029086531	332.5744275289481	221.72745204245197	159.77017217307127	304.49617279673015	0.2228812791113103	1.0139376584419593	0.6071107321031531	0.7331103121589195	0.9190861993839555	0.7897400419919092	1.092212176180493	0.7281781245587892	0.5247033836439305	1.0	8.250280284829559	-6.249217290819521	24.764407164589986	0.8154272938043328	0.22288086360288167	0.5158816443930813	0.174296599964247	1417.4140960287011	2871909.548769551	0.042930019508610584	0.7095403384184148	5.633557211945196e-07	6.249217290819521	-0.5925464302014511	
S(ph)AMPFTASPASSTTAR	ddPTM_K562_Methotrexat_30min_R1	1	SAMPFTASPASSTTAR	16	0	O00151	O00151	PDLIM1	PDZ and LIM domain protein 1	1	S(0.721)AMPFT(0.043)AS(0.122)PAS(0.007)S(0.081)T(0.013)T(0.013)AR	72.289	0.030067	182310000.0	5587.1	5349.3	6892.1	6291.2	4762.2	4749.2	4683.2	5540.1	5992.1	6162.8	True	False	5341.497773804645	6233.180902446702	5445.5423961192455	5739.6602637181295	5388.512771504014	5666.915685631806	5733.526813928101	5345.251542841426	5713.528578886733	5046.657201247009	1.0584229442976198	1.2351108176926517	1.0790394867267137	1.1373192263385519	1.0677390115129148	1.1229048179122476	1.136103877337135	1.0591667572587724	1.1321412077434034	1.0	12.301112378261553	-15.999999998657369	0.1916531853102412	0.497402910309447	1.1359949825537912	0.31264123588032866	0.05063910264034043	155.1828490466406	1.5208980861685728	29.74037733883866	0.1269983994887635	1.0000000030915218e-16	15.999999998657369	0.6385920722443441	
S(ph)AMPLR	ddPTM_K562_Methotrexat_30min_R1	1	SAMPLR	6	0	F5H385;Q9BRY0	F5H385	SLC39A3	Zinc transporter ZIP3	1	S(1)AMPLR	75.189	0.032379000000000005	0.0	1386.9	1512.3	1792.4	1636.7	1243.1	1411.3	1232.2	1438.4	1298.3	1597.6	True	False	1325.9335366271696	1762.1818702952069	1416.1997345952798	1493.2130521406814	1406.589438968678	1684.0137511859198	1508.552216459303	1387.8106567071197	1237.9423163780043	1308.2591589394797	1.0135098444118804	1.3469669661809918	1.082507028457038	1.1413740480526289	1.0751611631054112	1.2872172456648725	1.153098914806901	1.060807139949341	0.9462515954266457	1.0	10.353432643756365	-9.463496360734974	2.9698026105845914	0.9756206922768167	1.1626702941012141	0.38325218444983233	0.09391538611046414	0.2651844865379545	4.487163026724314	0.06514197334704691	0.02441309614086096	3.439565936276158e-10	9.463496360734974	0.18704960182439745	
S(ph)APAS(ph)PNHAGVLSAHSSGAQTPESLSR	ddPTM_K562_Methotrexat_30min_R1	1	SAPASPNHAGVLSAHSSGAQTPESLSR	27	0	Q01167-2;Q01167	Q01167-2	FOXK2	Forkhead box protein K2	2	S(1)APAS(1)PNHAGVLSAHSSGAQTPESLSR	71.44	0.00075025	0.0	316.28	224.51	511.09	400.47	230.5	299.65	204.47	265.35	175.79	383.77	True	False	302.3767099029788	261.60646148249464	403.8191934581019	365.36141686978607	260.81479018766026	357.5531216203929	250.32760241797894	256.0174900981882	167.61756126942103	314.26553419266673	0.9621694936410072	0.8324376459370553	1.2849617585189361	1.162588248209853	0.8299185300662419	1.137742077058911	0.7965480626472727	0.8146534132541292	0.5333628509407581	1.0	8.295840248816127	-8.844560162213524	6.6973543480891236	0.7666275362835702	1.0331968951689305	0.3376390149117261	0.17010576482389306	0.25167833636113407	16.60508256350544	0.07214385476431236	0.048574583160024255	1.4303418238218833e-09	8.844560162213524	0.2665693588853604	
S(ph)APAS(ph)PTHPGLMSPR	ddPTM_K562_Methotrexat_30min_R1	2	SAPASPTHPGLMSPR	15	0	P85037-2;P85037	P85037-2	FOXK1	Forkhead box protein K1	2	S(0.999)APAS(0.928)PT(0.073)HPGLMSPR;S(1)APAS(0.868)PT(0.131)HPGLMS(0.001)PR	116.87	0.0020301	179832000.0	3650.0	3282.0	4347.6	3841.5	3250.6	2823.0	2931.6	3639.2	3642.1000000000004	3736.3	True	False	3489.5503703865948	3824.2947155384963	3435.098173469335	3504.7216593135145	3678.1108762863673	3368.5047967107257	3589.0859258010837	3511.2072732818024	3472.7795659557355	3059.619864512756	1.1405176214406312	1.2499247896429495	1.1227205749680194	1.1454761749860847	1.2021463577705285	1.1009553297063455	1.1730496220884763	1.1475959200052328	1.1350362854663891	1.0	11.579136704361233	-15.999999999866034	0.20993305836724013	0.23244803830446104	1.1814682372712872	0.6088170420551662	0.03882968787671691	94.6909531316623	0.9439335913765965	30.53639019108303	0.080216705417398	1.0000000003084675e-16	15.999999999866034	0.9490201989668262	
S(ph)APLAPWS(ph)PPPGPQTTPRT(ph)AQQNAER	ddPTM_K562_Methotrexat_30min_R1	1	SAPLAPWSPPPGPQTTPRTAQQNAER	26	1	P0DSO1	P0DSO1			3	S(1)APLAPWS(1)PPPGPQT(0.185)T(0.174)PRT(0.642)AQQNAER	43.438	0.030849	0.0	150.98	63.17100000000001	184.97	158.62	162.03	133.04	101.71	154.2	120.18	227.51	True	False	144.3430999783475	73.60893402659423	146.14732476461106	144.71403087343742	183.33978505035384	158.74809711455725	124.52105659477012	148.77669859860794	114.59285803150934	186.3057343830252	0.7747646654911498	0.39509752220112515	0.7844488804845232	0.7767556449761254	0.9840802037441656	0.852083794630753	0.6683694251663118	0.7985621005778519	0.6150796077801789	1.0	7.541528270058747	-15.99999661251435	0.032524860310467085	2.0996345275228507	2.409736801390266e-08	0.1814088970381562	0.15171518743277196	2355.0569162267325	5.743246427694193	300.0875514997953	112.57749126300004	1.0000078000043808e-16	15.99999661251435	-2.0996345034254826	
S(ph)AS(ph)PYPSHSLS(ph)SPQR	ddPTM_K562_Methotrexat_30min_R1	1	SASPYPSHSLSSPQR	15	0	Q5T200-2;Q5T200	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	3	S(1)AS(0.967)PY(0.033)PS(0.001)HS(0.008)LS(0.576)S(0.415)PQR	110.57	0.006516500000000001	20556000.0	2955.5	2592.2	3759.8	2865.0	2532.4	2595.6	2122.2	2648.9	2886.7	3555.0	True	False	2825.5797588157775	3020.5169901337235	2970.669360707061	2613.829898199459	2865.4549877276827	3097.162965052201	2598.157371993129	2555.736685589186	2752.497947075703	2911.1550513456755	0.9706043508433737	1.037566511181703	1.0204435381529662	0.8978669470014047	0.9843017418131446	1.063894883792103	0.8924833360532054	0.8779115644863374	0.9455002906160448	1.0	11.507375965706533	-8.784626691763759	24.991550472800874	0.9187997501984685	0.993827877163147	0.2753437344829244	0.052000233345841335	294.0575091451386	316935.3362392909	0.022178558039036424	0.014963380168208654	1.6420005877430775e-09	8.784626691763759	0.07502812696467853	
S(ph)AS(ph)PYPSHSLSS(ph)PQR	ddPTM_K562_Methotrexat_30min_R1	1	SASPYPSHSLSSPQR	15	0	Q5T200-2;Q5T200	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	3	S(1)AS(1)PYPS(0.022)HS(0.004)LS(0.254)S(0.72)PQR	111.34	0.0063605	13520000.0	1333.8	1342.5	1833.2	1747.3	1273.5	1152.2	1178.7	1420.8	1399.0	1640.8	True	False	1275.1677490470258	1564.3253064017142	1448.4363721602697	1594.1169218582604	1440.987571817723	1374.846343170422	1443.0534795817082	1370.8296586828938	1333.960795357644	1343.6352203229217	0.9490431106298026	1.164248512349768	1.0779982172632843	1.186420910784952	1.0724544504507736	1.023228866269224	1.0739920015157782	1.0202394503721302	0.9927998129113104	1.0	10.391925802792246	-8.934570171843836	0.9969301156691112	0.9981176286877066	1.0960416281986545	0.23577544724061605	0.06226394035203236	0.7739761693913224	1.4517103041143569	0.04886624681409094	0.024177048090140867	1.1625986870352104e-09	8.934570171843836	0.09792399951094788	
S(ph)ASADNLTLPR	ddPTM_K562_Methotrexat_30min_R1	1	SASADNLTLPR	11	0	Q8ND76-3;Q8ND76-2;Q8ND76	Q8ND76-3	CCNY	Cyclin-Y	1	S(0.758)AS(0.239)ADNLT(0.003)LPR	145.83	1.6690000000000002e-07	188690000.0	1145.8	977.97	1235.4	1346.4	937.39	978.34	922.38	1260.5	1316.7	1099.2	True	False	1095.432003942182	1139.5629198522793	976.106422739907	1228.363202420855	1060.6732155054692	1167.390358772219	1129.2471947879658	1216.1675005417985	1255.4869043941458	900.124228534224	1.216978689403795	1.266006273054066	1.0844130085570671	1.3646596363939012	1.1783631435326274	1.2969213823665378	1.2545459382054953	1.3511107267073836	1.3947929236818786	1.0	9.813980315130493	-7.271882864457025	24.991703418398142	1.2750884293214257	1.1968200124018804	0.07189511141011784	0.11484254837907973	1727.5600864547189	4134119.0266108247	0.0307089002423738	0.04610064307027574	5.347085586307884e-08	7.271882864457025	-0.07826841691954534	
S(ph)ASASHQADIKEAR	ddPTM_K562_Methotrexat_30min_R1	1	SASASHQADIKEAR	14	1	C9JXK0;A0A494C1L1;Q14739	C9JXK0	LBR	Lamin-B receptor	1	S(0.643)AS(0.357)ASHQADIKEAR	106.82	0.0015750999999999999	44820000.0	2111.9	2121.9	2815.5	3488.2	1863.4	1780.1	1696.3	2000.2	1945.4	4036.3	True	False	2019.0634047176595	2472.507908866889	2224.565026084027	3182.394921779878	2108.469761543105	2124.079131641786	2076.738455429246	1929.851832275847	1854.9587786195568	3305.286957453321	0.6108587335101823	0.7480463695569485	0.6730323432486552	0.9628195562880478	0.637908232684176	0.6426307788048636	0.6283080658840421	0.5838681654928901	0.5612096022212781	1.0	11.690559813315904	-12.340868718367226	5.599626896585731	1.0000657850424284	0.6771370310303804	0.44937493061002054	0.10876782550018217	9.444913127722202e-05	1.111751745564615e-05	0.1113509395798187	0.027001087741088566	4.561747908799298e-13	12.340868718367226	-0.322928754012048	
S(ph)ASDSGCDPASKK	ddPTM_K562_Methotrexat_30min_R1	1	SASDSGCDPASKK	13	1	H0Y9V5;Q7LBC6	H0Y9V5	KDM3B	Lysine-specific demethylase 3B	1	S(0.993)AS(0.006)DSGCDPASKK	98.59200000000001	0.0058857	0.0	917.97	594.24	1361.5	938.29	619.42	532.55	370.29	456.26	876.52	1150.9	True	False	877.6171379462421	692.428059647043	1075.7397559983676	856.0315724892046	700.8845871498501	635.4577504386459	453.3369584748542	440.21307718937	835.7707765167129	942.460857550981	0.9311974401003372	0.734702193835766	1.1414158448911254	0.9082940321931606	0.7436750094546359	0.6742537319692047	0.4810140971295793	0.4670889763350806	0.8867962736282691	1.0	9.88028889113773	-7.87622995729674	2.986723185236774	0.6578393960693746	0.93224756452145	0.2526796048257095	0.17900504131542097	0.3095505302326979	5.547151068167667	0.05868662862151593	0.0685588917890765	1.3297501338359838e-08	7.87622995729674	0.2744081684520754	
S(ph)ASPHDVDLCLVSPCEFEHR	ddPTM_K562_Methotrexat_30min_R1	3	SASPHDVDLCLVSPCEFEHR	20	0	Q66K74-2;Q66K74	Q66K74-2	MAP1S	Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain	1	S(0.5)AS(0.5)PHDVDLCLVSPCEFEHR;S(0.5)AS(0.5)PHDVDLCLVSPCEFEHR;S(0.5)AS(0.5)PHDVDLCLVSPCEFEHR	201.85	3.4326e-21	233006000.0	5408.599999999999	4505.1	5968.7	5484.199999999999	4899.0	4659.1	4819.0599999999995	5808.9	6307.4	6423.5	True	False	5170.844420074778	5249.491201393199	4715.95143711161	5003.408700769799	5543.304369324717	5559.405135797007	5899.856877333522	5604.597694484135	6014.170350706792	5260.141905012362	0.9830237498246021	0.9979752060283745	0.8965445271766916	0.9511927227670562	1.0538317158406945	1.0568926154823841	1.1216155350698007	1.0654841248947187	1.1433475482811444	1.0	12.360886004882346	-7.8584998317720585	3.4342913011607092	1.0822184703831064	0.9552038929534375	0.6304968043942973	0.043772433786883364	0.15006277493043094	3.4748013489389025	0.01401697767505677	0.016410738566010455	1.3851607224790384e-08	7.8584998317720585	-0.12701457742966882	
S(ph)ASPHDVDLCLVSPCEFEHRK	ddPTM_K562_Methotrexat_30min_R1	2	SASPHDVDLCLVSPCEFEHRK	21	1	Q66K74-2;Q66K74	Q66K74-2	MAP1S	Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain	1	S(0.5)AS(0.5)PHDVDLCLVSPCEFEHRK;S(0.5)AS(0.5)PHDVDLCLVSPCEFEHRK	100.77	0.00015546	90972000.0	6590.3	4989.8	7419.1	7238.8	4733.799999999999	3931.1	4481.7	6105.2	6298.2	7822.7	True	False	6300.598303002407	5814.279637901882	5861.932298000357	6604.185642962041	5356.377673710826	4690.729439018609	5486.835309613423	5890.476655539696	6005.398056698723	6405.933226487149	0.9835566622753411	0.907639750889237	0.9150785827367875	1.0309482489850443	0.8361588365553612	0.7322476324953648	0.8565239623364392	0.9195345076629661	0.9374743451692097	1.0	12.645193044635763	-7.783119299712294	24.999901685475894	0.8677061923926868	0.952456334762982	0.20074714093883006	0.07420146778072544	375.46251021403003	432957.1279723382	0.024173335789495654	0.02743338533131612	1.647709707221366e-08	7.783119299712294	0.08475014237029521	
S(ph)ASQGALTSPSVSFSNHR	ddPTM_K562_Methotrexat_30min_R1	3	SASQGALTSPSVSFSNHR	18	0	A0A087WW76;A0A452Q6Z5;Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3	A0A087WW76	ARHGAP21	Rho GTPase-activating protein 21	1	S(0.565)AS(0.435)QGALTSPSVSFSNHR;S(0.5)AS(0.5)QGALTSPSVSFSNHR;S(0.555)AS(0.445)QGALTSPSVSFSNHR	131.33	6.0192e-07	72441000.0	3539.46	2748.4300000000003	3403.7400000000002	3698.7799999999997	2542.98	2429.33	2770.86	2692.62	3011.85	3230.2799999999997	True	False	3383.869576429737	3202.5613421777757	2689.341488859261	3374.51370012642	2877.426443173173	2898.7636407344226	3392.295889058939	2597.9190284084566	2871.829750892008	2645.2449899468106	1.2792272886972857	1.2106861006632779	1.0166701001533083	1.2756904229858397	1.0877731378790103	1.0958393841595404	1.2824127451148295	0.9821090440703166	1.085657382135238	1.0	11.369185628707852	-3.0000000219376877	0.07326064600906855	0.8456812100184443	1.8331805041951301	0.30653947593228126	0.09485239511912208	303.157626418099	1.637024644405675	3.6743193431734347	30.652516931132066	0.0009999999494866086	3.0000000219376877	0.9874992941766858	
S(ph)CPELTSGPR	ddPTM_K562_Methotrexat_30min_R1	3	SCPELTSGPR	10	0	Q13111;Q13111-3;Q13111-2	Q13111	CHAF1A	Chromatin assembly factor 1 subunit A	1	S(1)CPELTSGPR;S(0.992)CPELT(0.007)SGPR;S(1)CPELTSGPR	106.16	0.0038702	35498400.0	1378.25	1013.77	1678.49	1568.19	1194.67	1059.39	1082.92	1476.9099999999999	1420.41	1435.9	True	False	1317.6637802699527	1181.2782613563256	1326.1978869230254	1430.7092174720449	1351.790045091071	1264.102124189649	1325.7923764389775	1424.9662381794421	1354.3754491307718	1175.8445958445163	1.1206104828194399	1.0046210745289064	1.1278683353309304	1.2167502597947304	1.1496332507444889	1.075058837415283	1.1275234679177697	1.2118661285813892	1.1518320141260086	1.0	10.199481685296043	-6.93329813265109	9.81662386632336	1.142551581053425	1.0631065928761574	0.14630888651512342	0.06502039359463846	0.574130245148854	79.7784872491265	0.01653724051974769	0.0345065661306336	1.1660089053638651e-07	6.93329813265109	-0.07944498817726764	
S(ph)CSASCVPHGAK	ddPTM_K562_Methotrexat_30min_R1	2	SCSASCVPHGAK	12	0	P00519-2;P00519	P00519-2	ABL1	Tyrosine-protein kinase ABL1	1	S(0.983)CS(0.017)ASCVPHGAK;S(0.499)CS(0.499)AS(0.001)CVPHGAK	100.38	0.0075994	13713700.0	3572.1000000000004	2882.5	4507.9	3732.5	2645.34	2617.77	2536.0	3403.7	3553.2	3977.4	True	False	3415.074761111773	3358.784130877427	3561.753394098448	3405.2775200800966	2993.2485773319963	3123.617003785137	3104.762555543575	3283.989941764474	3388.0125075516644	3257.0543182059882	1.0485163670812907	1.031233686249197	1.0935505048808307	1.045508360436479	0.9190048076879178	0.9590312898145495	0.953242486067504	1.008269933788922	1.040207554603452	1.0	11.669352064559538	-7.606798131987808	9.083234786506507	0.9780975247723258	1.0574893649486956	0.5336642443576345	0.0343422259582262	0.23836941333107872	23.40009228157505	0.010845557998533414	0.014006661507046913	2.4728733146278686e-08	7.606798131987808	0.0793918401763698	
S(ph)CSSLAVVEK	ddPTM_K562_Methotrexat_30min_R1	1	SCSSLAVVEK	10	0	Q8IW36	Q8IW36	ZNF695	Zinc finger protein 695	1	S(0.809)CS(0.159)S(0.032)LAVVEK	98.182	0.0058299	7497200.0	273.49	403.02	435.99	286.94	487.97	326.78	412.93	333.58	362.24	262.14	True	False	261.46770706767967	469.6122048312992	344.4816571558781	261.78441570308996	552.1466081035685	389.925610155555	505.54006390402543	321.8478023250563	345.3995414655844	214.6639058114642	1.218032934224734	2.1876626303620506	1.6047488554430327	1.2195083039857244	2.5721446091105316	1.8164470113481503	2.355030586036355	1.4993102874394264	1.6090247690216872	1.0	7.745935822590404	-10.090939073707492	1.5894293497306842	1.010945526851446	1.8494286369801223	0.2481881957045251	0.4292828364160565	0.686079437084956	3.745965735959309	0.40193901074459665	0.11668217437708826	8.110748339172678e-11	10.090939073707492	0.8384831101286763	
S(ph)CT(ph)RYR	ddPTM_K562_Methotrexat_30min_R1	2	SCTRYR	6	1	S4R468	S4R468	MCU		2	S(1)CT(0.962)RY(0.038)R;S(1)CT(0.983)RY(0.017)R	42.869	0.029798	17182300.0	155.99	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	149.13286637715217	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
S(ph)DFIDKAEES(ph)T(ph)QS(ph)KEISLPEVSLLK	ddPTM_K562_Methotrexat_30min_R1	1	SDFIDKAEESTQSKEISLPEVSLLK	25	2	Q2M3G0-1;Q2M3G0	Q2M3G0-1	ABCB5	ATP-binding cassette sub-family B member 5	4	S(0.998)DFIDKAEES(0.996)T(0.989)QS(0.989)KEIS(0.023)LPEVS(0.005)LLK	42.041000000000004	0.025115000000000002	22194000.0	1398.0	937.45	942.55	1064.7	929.75	911.32	986.27	1116.1	927.1	1008.1	True	False	1336.5455939179344	1092.3476785745156	744.7216357078668	971.3594040533899	1052.0284215920915	1087.4196922913286	1207.4661536498272	1076.8461303884972	883.9993233567345	825.5233213112731	1.6190282689954127	1.3232184365662922	0.902120650601294	1.1766589495139503	1.274377591078874	1.3172489065046105	1.4626675255301942	1.304440592517749	1.0708350697501523	1.0	9.689165162108736	-9.848743859449597	4.2684783913401585	1.0068787248609679	1.2866294636660343	0.26638425602154736	0.1746123923926141	0.3204678079359272	9.945821645300164	0.17885955891418664	0.04754533519812285	1.416629040764524e-10	9.848743859449597	0.2797507388050664	
S(ph)DFRIT(ph)T(ph)LKFHPK	ddPTM_K562_Methotrexat_30min_R1	1	SDFRITTLKFHPK	13	2	Q64LD2-2;Q64LD2	Q64LD2-2	WDR25	WD repeat-containing protein 25	3	S(1)DFRIT(1)T(1)LKFHPK	51.147	0.030379000000000003	4013200.0	2127.4	1876.0	3611.5	2400.2	1549.1	1460.3	1179.4	1962.4	1733.1	2402.5	True	False	2033.8820432768346	2185.977113452228	2853.4955040676473	2189.778192550903	1752.8338025149856	1742.4823076998487	1443.9104724006675	1893.3812797010912	1652.5285592811526	1967.3839692990118	1.0338002520176661	1.1111085317174267	1.4504009123772423	1.1130405791255538	0.8909464699661696	0.885684917073256	0.7339240813856684	0.9623852330034548	0.8399623993428982	1.0	10.942062836860869	-7.695328807652481	3.975828648780628	0.8743556761081402	1.2019615775511931	0.5902225979628428	0.12007768834555511	0.1508104514776115	4.7233082128739845	0.03746110190949522	0.048090284591437056	2.016838821499785e-08	7.695328807652481	0.3276059014430529	
S(ph)DHEEDNMEDGM	ddPTM_K562_Methotrexat_30min_R1	1	SDHEEDNMEDGM	12	0	A0A1B0GWI0;A0A1B0GVV8;A0JP08;A0A1B0GV02;O60315-2;O60315	A0A1B0GWI0	ZEB2	Zinc finger E-box-binding homeobox 2	1	S(1)DHEEDNMEDGM	158.25	4.8346e-32	0.0	1727.2	1863.6	2427.4	1966.7	1967.1	1676.1	1440.2	2341.8	2037.2	1782.4	True	False	1651.2743560908848	2171.5282242161893	1917.9219123837215	1794.2824644987354	2225.8081291893554	1999.9826035305873	1763.2015112357467	2259.437566655126	1942.4910166566067	1459.5900881908672	1.1313274661501753	1.487765806157094	1.3140140700468497	1.2293057338603284	1.5249542643497944	1.370235807787326	1.2080114310869292	1.5479945944656652	1.3308469496831714	1.0	10.511347543652425	-10.046848100861851	23.198261544959678	0.9999999988962499	1.3579361171327045	0.3881081934303191	0.13165414188699887	5412.862987171098	2680336.9158703825	0.12104987715016302	0.03125494390349908	8.97742734714935e-11	10.046848100861851	0.35793611823645455	
S(ph)DISPLTPR	ddPTM_K562_Methotrexat_30min_R1	1	SDISPLTPR	9	0	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	S(0.838)DIS(0.162)PLTPR	97.965	0.0089546	26205000.0	2256.4	1836.1	2681.1	2475.3	1712.2	1963.7	1885.9	2474.2	2060.7	2490.1	True	False	2157.2113577370746	2139.4843166362684	2118.373749399356	2258.2942921511763	1937.3843113202252	2343.157233191943	2308.8610818216193	2387.180983610091	1964.8985067859146	2039.118760437655	1.0579135455916622	1.0492200641501979	1.0388672746773662	1.1074854177039104	0.9501086199140286	1.1491028765234998	1.132283772096761	1.1706924726138714	0.9636017994185828	1.0	10.99373008655166														
S(ph)DKSPDLAPTPAPQSTPR	ddPTM_K562_Methotrexat_30min_R1	3	SDKSPDLAPTPAPQSTPR	18	1	F8WAE5;Q9BY44-2;Q9BY44-4;Q9BY44-3;Q9BY44	F8WAE5	EIF2A	Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed	1	S(0.864)DKS(0.136)PDLAPTPAPQSTPR;S(0.844)DKS(0.156)PDLAPTPAPQSTPR;S(0.9)DKS(0.1)PDLAPTPAPQSTPR	141.08	4.2895e-09	549130000.0	9942.7	7029.4	15788.5	10996.9	7777.4	7626.8	6301.34	8523.0	9474.9	12598.9	True	False	9505.630813052823	8190.888870629586	12474.709612618597	10032.818850788704	8800.264421715865	9100.57115960091	7714.575899743273	8223.24125911761	9034.413967072287	10317.117124162882	0.9213456335385064	0.7939125602680588	1.2091274590071865	0.9724440199764385	0.8529770783647964	0.8820846996383516	0.747745305873827	0.7970483576132548	0.8756723276809101	1.0	13.332752279409217	-7.766205352060451	5.958283499943192	0.8440794705740307	0.9787376290770972	0.19071078516298168	0.11348882209343111	0.24127866342118617	31.09572789445494	0.03557613054909566	0.0429338582409174	1.7131470704899774e-08	7.766205352060451	0.1346581585030665	
S(ph)DSLLSFR	ddPTM_K562_Methotrexat_30min_R1	1	SDSLLSFR	8	0	Q00587-2;Q00587	Q00587-2	CDC42EP1	Cdc42 effector protein 1	1	S(0.73)DS(0.27)LLSFR	152.06	2.0199e-12	5860400.0	3306.9	2415.2	3012.8	3174.6	2328.3	2689.8	2676.9	3341.8	3512.5	3569.7	True	False	3161.5326355702578	2814.2707486193103	2380.454452348057	2896.2877468844677	2634.5122602773495	3209.565781860613	3277.2629672455037	3224.26699984973	3349.204641668134	2923.1927388997638	1.081534102592291	0.9627386901893271	0.8143337319741758	0.990796025298892	0.901244801692047	1.0979658436989121	1.121124489546661	1.1029950084862639	1.1457351399034719	1.0	11.513329240144644	-8.273192488303152	23.500291789856878	1.1017238382494783	0.9455450309679073	0.4918199407995355	0.07258930953039698	273.57315679831083	547005.9088457528	0.02550305985684341	0.02270116085023795	5.330985628009254e-09	8.273192488303152	-0.15617880728157096	
S(ph)DSSSSLPKTNPTHSATRPQQT(ph)SDLHVQGNS(ph)SGIFRK	ddPTM_K562_Methotrexat_30min_R1	1	SDSSSSLPKTNPTHSATRPQQTSDLHVQGNSSGIFRK	37	3	C9JWC4;Q8NCD3-3;Q8NCD3-2;Q8NCD3	C9JWC4	HJURP	Holliday junction recognition protein	3	S(0.192)DS(0.192)S(0.192)S(0.192)S(0.192)LPKT(0.038)NPT(0.029)HS(0.109)AT(0.109)RPQQT(0.65)S(0.12)DLHVQGNS(0.492)S(0.492)GIFRK	40.545	0.032389	17003000.0	471.57	432.05	679.0	714.27	420.81	439.63	491.87	478.24	825.54	672.88	True	False	450.8403474419747	503.4389189056692	536.487179084019	651.6510580757165	476.15389092784903	524.5822755146784	602.1843683735086	461.4200281309878	787.1608255893841	551.0149116594874	0.8181999033096622	0.9136575222428482	0.9736345926978357	1.1826377912589405	0.8641397552995798	0.9520291818143323	1.0928640144418498	0.8374002560862329	1.4285653780560998	1.0	9.10594755155863	-9.74860202899609	24.999987842909196	1.2142828261085512	0.962755069201897	0.34292845868289357	0.1435583760013284	218.12000161693555	424781.26881018456	0.09369197261963255	0.034916082173275347	1.7840128203780288e-10	9.74860202899609	-0.2515277569066542	
S(ph)EAAGSPDQGSTYS(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	1	SEAAGSPDQGSTYSPAR	17	0	Q96S66-4;Q96S66-3;Q96S66-2;Q96S66	Q96S66-4	CLCC1	Chloride channel CLIC-like protein 1	2	S(0.834)EAAGS(0.166)PDQGS(0.001)T(0.081)YS(0.918)PAR	164.74	4.2115e-08	6141000.0	2899.0	2290.4	3742.7	2800.8	2273.7	2541.1	2650.0	3015.3	2947.8	3478.6	True	False	2771.5634311645886	2668.849669856603	2957.1584170217334	2555.2582125225276	2572.73140325242	3032.1316113785447	3244.329957488357	2909.2501899116915	2810.757421411908	2848.59183167681	0.9729591303128609	0.9369013981499755	1.0381123698164283	0.8970250437804517	0.903159018657297	1.0644317580569957	1.1389241243378128	1.0212941557861503	0.9867182058713442	1.0	11.476033200601814	-8.273642191975227	24.719101274990884	1.0496451939380511	0.9509172048064424	0.42298350002685836	0.05374765249275756	656.4680691762702	1329796.0182637374	0.019831641774084426	0.017616036111284008	5.325468350842398e-09	8.273642191975227	-0.09872798913160874	
S(ph)EAEDEDDEDYVPYVPLR	ddPTM_K562_Methotrexat_30min_R1	1	SEAEDEDDEDYVPYVPLR	18	0	D6RGI7;A0A499FJW5;Q9UJV9;D6RD33	D6RGI7	DDX41	Probable ATP-dependent RNA helicase DDX41	1	S(1)EAEDEDDEDYVPYVPLR	162.79	2.0994e-12	10749000.0	461.49	538.0	424.25	412.53	500.3	446.93	167.01	430.36	461.35	611.78	True	False	441.2034521725232	626.895355563592	335.20572271928546	376.3641353941439	566.0982192229342	533.2928971994064	204.46624384910578	415.2239948696297	439.9019391981765	500.9807137305929	0.8806795153591173	1.2513363057339386	0.6690990561755347	0.7512547391126462	1.1299800645167326	1.064497859065668	0.40813196645142596	0.8288223148903897	0.8780815850622503	1.0	8.96861125479042														
S(ph)EDRRSS(ph)EEREAGEI	ddPTM_K562_Methotrexat_30min_R1	1	SEDRRSSEEREAGEI	15	3	Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2	Q9Y383	LUC7L2	Putative RNA-binding protein Luc7-like 2	2	S(0.878)EDRRS(0.394)S(0.728)EEREAGEI	81.992	0.031504000000000004	391660000.0	6471.5	5493.2	7994.2	6871.9	6046.9	5296.1	5621.2	6441.7	6685.3	7636.4	True	False	6187.020608755302	6400.857931564917	6316.326667206863	6269.451196313039	6842.173339634541	6319.4963704780985	6881.897191333418	6215.1417598096805	6374.501862190462	6253.373961771061	0.9893891915913876	1.023584703345022	1.0100669983629083	1.002570969630197	1.0941570712807207	1.0105738772559048	1.1005094583187776	0.9938861481505654	1.019370007480745	1.0	12.610419079963334	-3.6315670618527838	12.357660420359947	1.0268798472942435	0.9951858729151052	0.0	0.0379090198696319	0.0	0.0	0.008467065165752222	0.0	0.00023357853926145563	3.6315670618527838	-0.031693974379138345	
S(ph)EGGGTGESSQGGT(ph)S(ph)KR	ddPTM_K562_Methotrexat_30min_R1	1	SEGGGTGESSQGGTSKR	17	1	F5H0R1;Q9H6E5	F5H0R1	TUT1	Speckle targeted PIP5K1A-regulated poly(A) polymerase	3	S(0.577)EGGGT(0.423)GES(0.219)S(0.219)QGGT(0.721)S(0.84)KR	52.754	0.031993	35723000.0	321.12	167.37	164.43	379.02	212.21	170.09	219.13	400.12	238.84	352.39	True	False	307.0039492982311	195.02504769642837	129.9183900689031	345.79190506651264	240.11933460183667	202.957485254172	268.2754805978957	386.0475528098252	227.73638053125052	288.5687562710837	1.063884923875228	0.6758356317453174	0.45021641201813534	1.198299876725646	0.8321044097243386	0.7033245313068897	0.9296761162385704	1.3378009379753129	0.789192785366248	1.0	8.172771295519105	-9.002885289570315	24.77214667176126	1.0648458247168202	0.8150189055468371	0.15598963856005454	0.22994631146591252	169.79473401772563	1457804.7932986852	0.09733029313215931	0.06423893805032131	9.933783953299776e-10	9.002885289570315	-0.24982691916998312	
S(ph)EIVGVSRAGT(ph)TSRQRHFDT(ph)Y(ph)HR	ddPTM_K562_Methotrexat_30min_R1	1	SEIVGVSRAGTTSRQRHFDTYHR	23	3	Q99959-2;Q99959	Q99959-2	PKP2	Plakophilin-2	4	S(1)EIVGVS(0.011)RAGT(0.335)T(0.335)S(0.335)RQRHFDT(0.992)Y(0.991)HR	50.938	0.020382	0.0	508.02	601.38	660.43	681.03	648.36	683.59	780.48	690.19	471.92	554.15	True	False	485.688049085972	700.7478232877942	521.8147683099535	621.3251572672871	733.6307044081186	815.6840928032186	955.5225076303823	665.9156264965837	449.9805422052747	453.7880651767103	1.0702970976040094	1.5442182751432982	1.1499085329772893	1.369196779173414	1.6166813556950521	1.7975001005933946	2.1056580834894607	1.4674595424568262	0.9916094686845655	1.0	8.82587485577749	-7.617999449205724	4.710267367557206	1.5642458963506571	1.2801109857220194	0.07220362951864201	0.3372618318850817	0.4700088392564386	17.951287884869885	0.10465530710468231	0.1368222879231716	2.4099084850527517e-08	7.617999449205724	-0.2841349106286377	
S(ph)ERHGVQSLSKYKPS(ph)SSFMVS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	SERHGVQSLSKYKPSSSFMVSK	22	3	H3BTI0;Q9H0B8-2;Q9H0B8	H3BTI0	CRISPLD2	Cysteine-rich secretory protein LCCL domain-containing 2	3	S(0.493)ERHGVQS(0.122)LS(0.23)KY(0.21)KPS(0.642)S(0.172)S(0.172)FMVS(0.959)K	52.784	0.017830000000000002	18000000.0	1113.5	899.78	1099.0	1057.4	1010.7	704.73	707.01	951.27	1013.6	977.44	True	False	1064.5518732672533	1048.4533513550361	868.3349187236182	964.69938371941	1143.6247654779534	840.909098613514	865.5749899033366	917.8132949150317	966.4779572369605	800.4161444127474	1.3299980025369156	1.3098853123761887	1.0848543283203036	1.2052472834955055	1.4287877293092492	1.0505898768827002	1.0814062109384304	1.1466701431771054	1.2074693445195936	1.0	9.644606456505276	-8.294426433552745	24.999981692681963	1.1054051834379819	1.2597947888499827	0.4379348481486467	0.09817668105108344	743.3953321889139	563395.9889547889	0.036012478777757526	0.03176225862946711	5.076607259216862e-09	8.294426433552745	0.15438960541200086	
S(ph)ERS(ph)S(ph)EDPTDDS(ph)RLPR	ddPTM_K562_Methotrexat_30min_R1	1	SERSSEDPTDDSRLPR	16	2	Q96CV9-3;Q96CV9-2;Q96CV9	Q96CV9-3	OPTN	Optineurin	4	S(1)ERS(1)S(1)EDPT(0.031)DDS(0.969)RLPR	68.536	0.029974	39350000.0	2575.8	2493.1	2716.9	2933.3	2715.4	2237.9	2175.6	2570.7	2502.1	2946.1	True	False	2462.570916175834	2905.0423995457095	2146.6598186353035	2676.1421432420507	3072.5226953387096	2670.3425025005095	2663.5336813251565	2480.2870239133686	2385.7779171296343	2412.532741707313	1.0207409307254043	1.2041463103584056	0.8897951026837234	1.1092666627803713	1.273567252465279	1.1068626992439274	1.1040404282514376	1.028084295410684	0.988910067782647	1.0	11.236332806722903	-9.3800876210468	3.000259624506685	0.9963497141122116	1.1046233717084017	0.1770683439773698	0.09581666203405194	0.49854654677105403	8.430562009634102	0.06631366420608678	0.02704759303439053	4.167852865065832e-10	9.3800876210468	0.10827365759619012	
S(ph)ESPKEPEQLR	ddPTM_K562_Methotrexat_30min_R1	1	SESPKEPEQLR	11	1	F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8W646	F8W6I7	HNRNPA1	Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed	1	S(0.973)ES(0.027)PKEPEQLR	153.49	8.6952e-08	245880000.0	2767.7	1981.2	3841.3	2686.8	1806.4	1781.1	1520.6	2452.2	2397.1	3042.4	True	False	2646.0352219504066	2308.5596253579733	3035.0636244704583	2451.252415526109	2043.9732624511478	2125.27236748901	1861.6332578704894	2365.9547360798097	2285.659344211442	2491.3918785412316	1.0620710634650228	0.9266144139113471	1.218220084368084	0.9838887397198127	0.8204141949952659	0.8530461971054537	0.7472261886638722	0.9496517815836871	0.917422651931317	1.0	11.282736249942984	-7.558066039862123	6.1511771846501	0.8723196907724307	1.062293381317303	0.453223919124228	0.09265857037452632	0.1563517941288489	16.666535873929195	0.027301914052800018	0.03589112504899754	2.7665209296068697e-08	7.558066039862123	0.18997369054487234	
S(ph)ETPPHWR	ddPTM_K562_Methotrexat_30min_R1	1	SETPPHWR	8	0	Q13427;E9PG73;C9JM79	Q13427	PPIG	Peptidyl-prolyl cis-trans isomerase G	1	S(0.922)ET(0.078)PPHWR	95.35799999999999	0.017172	25605000.0	5896.1	5469.3	6818.7	6825.0	5705.6	5393.0	5094.0	6548.8	6512.9	6508.4	True	False	5636.914503790799	6373.0088627954565	5387.548053048896	6226.662846496095	6455.986407352337	6435.120924074018	6236.45917111158	6318.474992104823	6210.116700560966	5329.665692314538	1.0576487962311254	1.1957614662370728	1.0108604111544603	1.168302705266306	1.2113304623706456	1.2074154919986002	1.1701407801439876	1.1855293290189222	1.165198167966905	1.0	12.37982932624577	-6.243492437506655	23.33012377473923	1.1530373609280768	1.0576485923052723	0.10968714246101163	0.07317397642114296	3171.1719206269245	4122200.9812994916	0.017856687880708686	0.49946703867862124	5.70831016128176e-07	6.243492437506655	-0.09538876862280454	
S(ph)FACNRGQDEFCLT(ph)S(ph)LMS	ddPTM_K562_Methotrexat_30min_R1	1	SFACNRGQDEFCLTSLMS	18	1	H0YHN7	H0YHN7	CPM		3	S(1)FACNRGQDEFCLT(0.973)S(0.569)LMS(0.458)	60.631	0.026601999999999997	10432000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
S(ph)FAMSAVITEGVK	ddPTM_K562_Methotrexat_30min_R1	2	SFAMSAVITEGVK	13	0	O00267-2;O00267	O00267-2	SUPT5H	Transcription elongation factor SPT5	1	S(1)FAMSAVITEGVK;S(1)FAMSAVITEGVK	93.348	0.0084947	11347600.0	2771.5	2167.72	3178.1	3260.4	2759.7	2988.17	3095.8	2863.6000000000004	2715.2	3633.7	True	False	2649.668178500399	2525.898885060057	2511.060241306215	2974.5657940975616	3122.6489218259676	3565.59156159656	3790.111955619793	2762.8855648960703	2588.970944642654	2975.601718727081	0.8904646619285757	0.8488699509625905	0.8438831801657952	0.9996518604546436	1.049417636161936	1.1982758106222187	1.2737295894697722	0.9285132306207944	0.8700663561083632	1.0	11.538965720761825	-7.43054832692568	2.8798771188373924	1.067123816434566	0.8590319775765606	0.3679285816883525	0.11157177041423022	0.30663629964487604	4.9229432902268275	0.037325533257205785	0.05799269921191737	3.710664360881057e-08	7.43054832692568	-0.20809183885800542	
S(ph)FDYNYR	ddPTM_K562_Methotrexat_30min_R1	4	SFDYNYR	7	0	O75494-6;O75494-3;Q5JRI1;O75494-5;O75494-4;O75494-2;O75494	O75494-6	SRSF10	Serine/arginine-rich splicing factor 10	1	S(0.985)FDY(0.011)NY(0.004)R;S(1)FDYNYR;S(0.902)FDY(0.055)NY(0.042)R;S(0.976)FDY(0.002)NY(0.022)R	119.68	0.004263	300914000.0	9204.099999999999	7600.9	11729.3	7857.4	8615.0	7432.8	7048.3	9616.2	9487.7	9293.8	True	False	8799.498784678159	8856.819531790532	9267.480220368452	7168.553941400494	9748.023503109289	8869.083405239635	8629.06069410007	9277.99279548595	9046.618897866125	7610.602761236692	1.1562157506757422	1.1637474467727094	1.217706469659773	0.9419167136028046	1.2808477605425928	1.1653588662402405	1.1338209291451553	1.219087776166932	1.188686255436105	1.0	12.893795004647128	-12.011147962000843	4.604804552074176	0.9999960186748319	1.1624897019726086	0.25343071823969787	0.08394679333212443	65298063.31995012	3.2380031327688155	3145.4434639066544	0.019647687196779978	9.746575201063658e-13	12.011147962000843	0.1624936832977767	
S(ph)FGEKSY(ph)LNVHR	ddPTM_K562_Methotrexat_30min_R1	1	SFGEKSYLNVHR	12	1	Q6ZN11-3;Q6ZN11-2;Q6ZN11	Q6ZN11-3	ZNF793	Zinc finger protein 793	2	S(0.998)FGEKS(0.222)Y(0.78)LNVHR	78.705	0.019312	0.0	597.0	1456.9	780.28	944.93	517.87	1131.5	981.54	1304.9	377.51	441.02	True	False	570.7565948276163	1697.6279619341972	616.5098911571107	862.0894539984691	585.978982188649	1350.1463611329038	1201.6753307445747	1259.005927375639	359.95964249854444	361.14700442882406	1.5803996373451927	4.700656356319773	1.7070884808588087	2.387087372805199	1.622549751216711	3.7384952514509773	3.3273855687799414	3.4861314421445453	0.9967122476007866	1.0	8.49644239362021														
S(ph)FNDFR	ddPTM_K562_Methotrexat_30min_R1	2	SFNDFR	6	0	P42356	P42356	PI4KA	Phosphatidylinositol 4-kinase alpha	1	S(1)FNDFR;S(1)FNDFR	106.68	0.010577	41579000.0	11654.099999999999	10989.599999999999	13952.9	12632.0	10582.5	10738.099999999999	9541.6	12106.6	12823.6	13919.4	True	False	11141.799718225324	12805.444608739132	11024.376967660382	11524.572172445225	11974.284239309816	12813.085851066051	11681.546687687127	11680.804015913796	12227.433634988038	11398.46177825626	0.9774827459157213	1.1234362019941002	0.9671811146211428	1.0110638081385275	1.0505175586193567	1.1241065768635845	1.0248353606774276	1.0247702052391081	1.0727266426697264	1.0	13.476551525464538	-7.826248536706534	8.209022384321425	1.0533510631717635	1.0234790600514978	0.07246253380553347	0.05029341698422603	0.7665151498977203	86.39359812958392	0.01548154083177399	0.01761382425241682	1.4919403621978754e-08	7.826248536706534	-0.029872003120265722	
S(ph)FPAT(ph)S(ph)PREPVT(ph)S(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SFPATSPREPVTSR	14	1	A0A494C0W1;Q5U4N7	A0A494C0W1	GDF5OS	Protein GDF5OS, mitochondrial	5	S(1)FPAT(1)S(1)PREPVT(1)S(1)R	52.725	0.032359	14249000.0	325.47	289.46	452.95	435.54	311.97	354.98	337.04	239.94	402.62	295.81	True	False	311.16272850677416	337.28834502125915	357.8819849279916	397.356884419474	352.9995231880448	423.5748610472457	412.62979957429286	231.5011742007133	383.902284079267	242.2359425424933	1.2845440079652493	1.3923959486816935	1.4774107474377447	1.6403712853214143	1.4572549369964833	1.7486045076607148	1.7034210334079918	0.9556846592247685	1.58482791632758	1.0	7.920269135238881	-12.008036107381152	7.1092469962009215	0.99999995797914	1.473784948464757	0.29447754551481653	0.21897275406281497	1.486681989217636e-07	2.0850406753643302e-08	0.21625200860020585	0.05244881138194909	9.816663235771917e-13	12.008036107381152	0.47378499048561695	
S(ph)FSADNFIGIQR	ddPTM_K562_Methotrexat_30min_R1	1	SFSADNFIGIQR	12	0	Q8N7R7-3;Q8N7R7-2;Q8N7R7	Q8N7R7-3	CCNYL1	Cyclin-Y-like protein 1	1	S(0.711)FS(0.289)ADNFIGIQR	151.3	9.7669e-10	8017100.0	441.78	659.29	830.99	771.53	538.39	390.13	411.07	546.34	414.91	675.15	True	False	422.35988017243574	768.2264664860978	656.5765551502631	703.8911627776014	609.1977218617538	465.5171010771364	503.26291155650546	527.1249125315401	395.6209246617868	552.8737926627377	0.7639354329643228	1.3895150695897225	1.1875704073222109	1.2731498076397099	1.1018748400566252	0.841995238796044	0.9102672585233286	0.9534272007953452	0.7155718536709917	1.0	9.1108063764191	-8.147656659381632	4.26904713346312	0.883406712945607	1.1741076237605013	0.3780659204608686	0.16576595471876723	0.23027104042998411	7.0201513300095035	0.05387681730263893	0.05397143198924551	7.117760007383773e-09	8.147656659381632	0.29070091081489424	
S(ph)FSASQSTDR	ddPTM_K562_Methotrexat_30min_R1	1	SFSASQSTDR	10	0	Q9ULJ3;Q9ULJ3-2	Q9ULJ3	ZBTB21	Zinc finger and BTB domain-containing protein 21	1	S(0.705)FS(0.291)AS(0.004)QSTDR	78.548	0.033856	4827500.0	950.89	747.7	998.92	772.92	1131.1	954.83	867.29	938.12	857.32	849.74	True	False	909.0900141635371	871.2447162730448	789.2603430494961	705.1593036357153	1279.859475840617	1139.337384004004	1061.8018599358775	905.1257878685218	817.4633803259582	695.8438518510474	1.3064569180933676	1.2520692881821192	1.134249215466871	1.0133872732508702	1.8392912036745053	1.6373463399485364	1.5259197262594586	1.300759912530309	1.1747799138432924	1.0	9.4426197897652	-7.716499663715448	24.999997727710905	1.4449189934352378	1.1789149156221126	0.19118498900089087	0.2327752036929718	207.57066727321362	115470.72610249129	0.07130647369977404	0.09205587850970699	1.9208804491348835e-08	7.716499663715448	-0.2660040778131252	
S(ph)FSKEVEER	ddPTM_K562_Methotrexat_30min_R1	2	SFSKEVEER	9	1	Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6	Q04637-9	EIF4G1	Eukaryotic translation initiation factor 4 gamma 1	1	S(0.999)FS(0.001)KEVEER;S(0.996)FS(0.004)KEVEER	113.77	0.0092918	792860000.0	8543.5	5821.6	11049.3	9044.8	5987.1	5590.700000000001	5205.8	6928.0	7364.4	9607.400000000001	True	False	8167.937969698057	6783.520449719349	8730.202927618622	8251.856426957931	6774.50859146438	6671.023651070022	6373.333167053924	6684.338313172217	7022.030651416601	7867.40676239056	1.0381995257629437	0.8622308029308166	1.1096671611480142	1.0488661227490104	0.8610853354944499	0.8479317076829254	0.8100932568430397	0.849624090256284	0.892547044215992	1.0	12.941672460729945	-7.769867470691895	24.998945930330606	0.8645746421613022	1.010627773724078	0.44067168473017415	0.07527033215208645	164.177363331286	486972.6265881224	0.023132496825476013	0.026649531710289283	1.698761967590903e-08	7.769867470691895	0.14605313156277588	
S(ph)FSPLQPGQAPTGR	ddPTM_K562_Methotrexat_30min_R1	2	SFSPLQPGQAPTGR	14	0	H7C1G6;H7C152;Q7Z3C6-2;Q7Z3C6	H7C1G6	ATG9A	Autophagy-related protein 9A	1	S(0.96)FS(0.04)PLQPGQAPTGR;S(0.799)FS(0.201)PLQPGQAPTGR	176.43	7.039e-08	47750000.0	3314.8	2474.7	3086.3999999999996	3035.3	2482.8999999999996	2677.3	2482.3	2596.4	2701.0	2910.3999999999996	True	False	3169.08536102945	2883.6021122922325	2438.6068181515698	2769.199961607265	2809.44487009519	3194.650333770325	3039.018963574849	2505.0831403464713	2575.431099543241	2383.2983576473844	1.3297056790479795	1.2099207399021208	1.0232066876254562	1.1619191330878162	1.1788053564843914	1.3404323984529771	1.2751315645493682	1.0510992601108087	1.0806163195133973	1.0	11.218743853963879	-9.277272241796117	24.043933274443	1.0493932895848959	1.210448035597329	0.44775143636426196	0.0878269217106921	565.6924711225072	859058.5227818108	0.05257299749566431	0.02540796120732633	5.281140944422124e-10	9.277272241796117	0.1610547460124332	
S(ph)FTGGLGQLVVPSK	ddPTM_K562_Methotrexat_30min_R1	2	SFTGGLGQLVVPSK	14	0	Q9Y3Q8	Q9Y3Q8	TSC22D4	TSC22 domain family protein 4	1	S(0.873)FT(0.124)GGLGQLVVPS(0.004)K;S(0.877)FT(0.123)GGLGQLVVPSK	145.79	1.9473000000000002e-08	121409000.0	13173.3	9752.7	15181.6	13993.6	9887.400000000001	9455.8	8847.900000000001	12037.2	13258.900000000001	18967.2	True	False	12594.21750526404	11364.167907444327	11995.189628839382	12766.802814465604	11187.766405646296	11282.999524171908	10832.266804098586	11613.844853250097	12642.496633000323	15532.056284074179	0.8108531977300097	0.7316589445466146	0.7722860006075738	0.821964753472859	0.7203016909691277	0.7264330825108425	0.6974135688141608	0.7477338892441675	0.8139615516306962	1.0	13.922961219864154	-10.16443011733107	2.7713854884641655	0.9998907221599038	0.7521198244510459	0.7977213013669258	0.03729871331755163	0.3067361921732009	4.1594242076197725	0.03794131899846445	0.010184545513279636	6.848096674917505e-11	10.16443011733107	-0.24777089770885796	
S(ph)FTPDHVVYAR	ddPTM_K562_Methotrexat_30min_R1	1	SFTPDHVVYAR	11	0	Q6NZI2-3;Q6NZI2-2;Q6NZI2	Q6NZI2-3	PTRF	Polymerase I and transcript release factor	1	S(0.5)FT(0.5)PDHVVYAR	91.09299999999999	0.011458	10793000.0	4587.7	4206.9	5116.9	4634.9	4130.1	3724.6	3779.6	4537.7	4735.8	5647.0	True	False	4386.030201156875	4902.018719926538	4042.9326165758675	4228.565513146481	4673.280542100021	4444.326236567047	4627.271512197353	4378.106519007153	4515.633691676	4624.2735794512055	0.948479826247087	1.0600624369867613	0.874284911373187	0.9144280589143504	1.010597764558435	0.9610863544744007	1.0006483034999205	0.9467663285455384	0.976506604570723	1.0	12.175011037181045	-7.769824911175008	24.995180390880236	0.9797658445291847	0.9518652155508908	0.10353279125060899	0.04731064130124411	557.5551592458202	1661930.432772512	0.015102377991609338	0.01738952148867873	1.6989284491703124e-08	7.769824911175008	-0.02790062897829393	
S(ph)FVDAEVDVTR	ddPTM_K562_Methotrexat_30min_R1	2	SFVDAEVDVTR	11	0	A0A2R8YHB3;A0A1B0GUB2;A0A3B3IRP5;Q6P1J9	A0A2R8YHB3	CDC73	Parafibromin	1	S(1)FVDAEVDVTR;S(1)FVDAEVDVTR	137.84	7.6226e-05	9010700.0	967.96	717.52	1028.19	1234.6799999999998	965.48	805.6800000000001	865.42	1046.02	917.6500000000001	988.64	True	False	925.409637402578	836.0779842453323	812.3869700477129	1126.437521364366	1092.4575428649987	961.3662573906832	1059.5124648338017	1009.2308837102195	874.9886517940963	809.5877158825285	1.1430628445168445	1.032720689609188	1.0034576292479103	1.3913718047666281	1.3493998506068177	1.1874763395374663	1.3087062019942226	1.246598563578822	1.0807830141546484	1.0	9.661043589528033	-7.241128953524702	24.98403746597536	1.2410495210834176	1.0570444066603812	0.28393332880958877	0.11681930197393724	933.0266523664299	1147723.469467914	0.031240164670208875	0.054019224650807204	5.7394601714254875e-08	7.241128953524702	-0.18400511442303635	
S(ph)GEGEVSGLMR	ddPTM_K562_Methotrexat_30min_R1	1	SGEGEVSGLMR	11	0	Q13263;Q13263-2;M0R0K9	Q13263	TRIM28	Transcription intermediary factor 1-beta	1	S(0.68)GEGEVS(0.32)GLMR	92.943	0.011328	111700000.0	3431.8	3043.3	4808.1	4464.7	2900.6	2706.6	2846.0	3510.1	3561.6	3770.5	True	False	3280.942181121293	3546.153597744761	3798.945516574182	4073.2866828939327	3282.0797415111806	3229.612144093963	3484.2879467969296	3386.6477934563795	3396.021993385119	3087.6259131079782	1.06261000310712	1.148504934710576	1.2303775209446262	1.3192293359119391	1.0629784286942543	1.0459855678705139	1.1284682940394404	1.0968452425143072	1.0998812968138072	1.0	11.592282255533489														
S(ph)GRPRT(ph)TS(ph)FAES(ph)CK	ddPTM_K562_Methotrexat_30min_R1	1	SGRPRTTSFAESCK	14	2	P49841;P49841-2;A0A3B3ITW1	P49841	GSK3B	Glycogen synthase kinase-3 beta	4	S(1)GRPRT(0.517)T(0.517)S(0.966)FAES(1)CK	78.249	0.020274	102520000.0	0.0	0.0	236.48	0.0	0.0	99.708	63.174	126.5	133.65	265.88	True	False	0.0	0.0	186.84607969041053	0.0	0.0	118.97515985491785	77.34237763561113	122.05092329911746	127.43664067158616	217.72655557012322	0.0	0.0	0.8581685371412262	0.0	0.0	0.5464430351335784	0.35522712162091524	0.5605697613666079	0.5853059142826638	1.0	7.766373569982722	-9.974177415077278	0.35969769433317844	1.0737780491976356	0.1288936338499422	0.48034688459840413	0.25917250901136707	1.4507389927200118	0.5296012246529875	0.4911339658656037	0.2770868822510627	1.0612619290075657e-10	9.974177415077278	-0.9448844153476934	
S(ph)GSAAQAEGLCK	ddPTM_K562_Methotrexat_30min_R1	1	SGSAAQAEGLCK	12	0	F8WF93;H7BZZ2;F8WE30;H7C0X4;Q92685	F8WF93	ALG3	Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase	1	S(0.933)GS(0.067)AAQAEGLCK	151.07	1.3205999999999998e-09	28360000.0	1593.9	969.98	1858.9	1349.3	915.11	724.38	852.45	869.8	1146.0	1653.9	True	False	1523.834064481972	1130.2527081590588	1468.7422933715497	1231.0089639233965	1035.4630049832097	864.3561830114472	1043.6336121739432	839.2086409926666	1092.7227101357112	1354.362683381326	1.1251299841468911	0.8345273552112716	1.0844527181631005	0.9089212062828235	0.7645389360537123	0.6382014165167932	0.7705717419564374	0.6196336116537731	0.8068169062422779	1.0	10.40339841312466	-7.661214353875447	3.233599073936236	0.7396917514811614	0.9971574284792522	0.4473038865120089	0.1221592345477475	0.20254869984709134	4.200969472959136	0.035467841750195045	0.04668463987862514	2.1816528519454613e-08	7.661214353875447	0.25746567699809075	
S(ph)GSDAGEARPPTPASPR	ddPTM_K562_Methotrexat_30min_R1	1	SGSDAGEARPPTPASPR	17	1	Q96FS4;F6RY50;E9PIB3	Q96FS4	SIPA1	Signal-induced proliferation-associated protein 1	1	S(0.49)GS(0.49)DAGEARPPT(0.019)PAS(0.001)PR	117.13	0.0012064999999999999	4784100.0	1784.2	1128.3	1885.9	1736.9	1078.3	1190.9	1157.8	1503.2	1401.3	1919.2	True	False	1705.7687043407577	1314.7323971791843	1490.075362348381	1584.6286737112182	1220.1153503659611	1421.0245704579543	1417.466122558497	1450.331603978129	1336.1538688596602	1571.6142825717643	1.0853609077346036	0.8365490259020664	0.9481177276590066	1.0082809066345193	0.7763452927962604	0.9041815070124029	0.9019173077499515	0.9228292336493847	0.8501792606982418	1.0	10.618031468605828	-6.247981660202668	24.841148167415316	0.9033397747147738	1.0853610381639565	0.38680887151491716	0.06793976946359476	2183.213345475984	4029848.0942032966	0.016380673064593215	0.3123117601693278	5.649608320078732e-07	6.247981660202668	0.18202126344918268	
S(ph)GTNSPPPPFSDWGR	ddPTM_K562_Methotrexat_30min_R1	1	SGTNSPPPPFSDWGR	15	0	D6RAU6;D6REP2;D6RAJ6;Q9UKT5-2;Q9UKT5	D6RAU6	FBXO4	F-box only protein 4	1	S(0.853)GT(0.122)NS(0.025)PPPPFSDWGR	111.07	0.0014091	33325000.0	1615.5	1354.7	2141.0	1545.1	1401.8	1423.9	1542.4	1639.8	2020.3	1533.1	True	False	1544.4845543450813	1578.5411490371712	1691.6333584961476	1409.6434819225071	1586.1612706510284	1699.0485228609302	1888.3224628037892	1582.127304552511	1926.3766939678683	1255.4407339572588	1.2302329473385265	1.2573601495798783	1.3474418287862715	1.1228275806211798	1.2634298280662837	1.353348252055978	1.5041111951590356	1.260216640864844	1.5344226468546713	1.0	10.29397820905477	-8.228789799772574	5.067075145627839	1.3578693009526626	1.2429075317875111	0.06508441655622599	0.1469910095226023	0.42163881322390956	29.263603632308104	0.04687651898747843	0.04560228818253761	5.9048680894380376e-09	8.228789799772574	-0.11496176916515144	
S(ph)GVMT(ph)MPEYLKK	ddPTM_K562_Methotrexat_30min_R1	1	SGVMTMPEYLKK	12	1	Q9NY91	Q9NY91	SLC5A4	Low affinity sodium-glucose cotransporter	2	S(1)GVMT(0.998)MPEY(0.002)LKK	62.633	0.027327999999999998	59047000.0	0.0	0.0	0.0	53.251999999999995	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	48.58347983906372	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
S(ph)HDDGNIDLESDSFLKFDSEPSAVALELPTR	ddPTM_K562_Methotrexat_30min_R1	1	SHDDGNIDLESDSFLKFDSEPSAVALELPTR	31	1	P18583-6;P18583-2;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-8	P18583-6	SON	Protein SON	1	S(0.855)HDDGNIDLES(0.106)DS(0.038)FLKFDS(0.001)EPSAVALELPTR	46.76	0.014415	7177700.0	227.21	254.27	333.27	519.27	252.45	405.27	402.63	270.8	312.58	202.43	True	False	217.22212045357222	296.2837956489863	263.3211814040218	473.746405318685	285.651599925704	483.5826918040936	492.930026710769	261.2758105090989	298.04822402637035	165.76796541319408	1.3103986642541172	1.7873404846977992	1.5884925700069135	2.857888761183877	1.723201459423643	2.9172264411806763	2.9736145067720963	1.5761538114909084	1.7979844494287773	1.0	7.373021423358336	-7.083484500214827	24.999669466236313	2.1990317750103445	1.583604874771652	0.1361942558125342	0.6228107224815562	153.44394883186328	45946.911524449075	0.16796434135372332	0.2909229155218224	8.25116933025393e-08	7.083484500214827	-0.6154269002386925	
S(ph)HIY(ph)TCPRSAFTVPVRPFFR	ddPTM_K562_Methotrexat_30min_R1	1	SHIYTCPRSAFTVPVRPFFR	20	2	Q8WVV5-5;Q8WVV5-4;Q8WVV5	Q8WVV5-5	BTN2A2	Butyrophilin subfamily 2 member A2	2	S(0.996)HIY(0.943)T(0.057)CPRS(0.003)AFT(0.001)VPVRPFFR	50.178000000000004	0.023955	2382400.0	1166.7	1321.1	1650.1	1543.5	1299.1	1442.2	791.13	1301.0	1320.4	1232.5	True	False	1115.4132649671353	1539.3893201395206	1303.7665599507197	1408.1837514383476	1469.9544205327081	1720.8847388651122	968.5610412331189	1255.2430925861806	1259.014892201739	1009.282306830814	1.1051548782912648	1.5252316519579772	1.2917758996931175	1.395232772741355	1.456435340819976	1.7050578685648	0.9596532453585147	1.2436986996509363	1.2474358102591683	1.0	9.979114052465029	-8.776972275123011	24.999917253058833	1.1330052163105966	1.413879193672599	0.43202518928526423	0.16812259084325115	254.83320706816073	410145.6447119083	0.06941803107943026	0.04698901080512162	1.671197298283297e-09	8.776972275123011	0.28087397736200237	
S(ph)HNNFVAILDLPEGEHQYK	ddPTM_K562_Methotrexat_30min_R1	3	SHNNFVAILDLPEGEHQYK	19	0	Q9Y478	Q9Y478	PRKAB1	5-AMP-activated protein kinase subunit beta-1	1	S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK	120.39	6.0933e-05	40270300.0	11331.500000000002	7099.5	11032.900000000001	10713.4	7199.700000000001	6770.900000000001	6917.6	10110.6	11730.0	15892.5	True	False	10833.380827954998	8272.571704133314	8717.245063499367	9774.172855626557	8146.586745831223	8079.280597962684	8469.04789204583	9755.00446725736	11184.674860289604	13014.214248526336	0.8324268081864193	0.6356566402055397	0.6698249235051946	0.7510382623932395	0.6259760743337771	0.6208043331450104	0.6507536859557097	0.7495653814337633	0.8594199116981727	1.0	13.667800589180443	-9.89570180606636	1.8391349404904385	0.9968306898248509	0.6797096687471735	0.7270449254047415	0.06216973137263932	0.16249495641091655	1.1932537785007402	0.05889095158987019	0.01692628914951468	1.2714468024400913e-10	9.89570180606636	-0.31712102107767737	
S(ph)HS(ph)RS(ph)GSRSRS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	SHSRSGSRSRSK	12	3	A0A0D9SEM4	A0A0D9SEM4	SRSF4		4	S(0.948)HS(0.948)RS(0.948)GS(0.155)RS(0.007)RS(0.993)K	56.29	0.032542	0.0	225.91	170.9	137.86	262.55	188.52	56.974	148.07	333.13	151.28	143.5	True	False	215.97926689699617	199.13832019668757	108.92506996836939	239.53264913517216	213.3136843651961	67.98341915968719	181.27846671898152	321.41362908011865	144.24702581966	117.51075945656942	1.8379531193211252	1.6946390366091262	0.9269369925962124	2.0383890823520767	1.8152693876855959	0.5785293148821241	1.5426542008349446	2.7351846806752134	1.2275218583109573	1.0	6.876649047875443	-9.02300315230346	24.96492226746865	1.8165957564410091	1.4696486322224849	0.0	0.5979515150632357	2370.6058219331517	2572766.6077376967	0.27442322569145733	0.15989030597420634	9.48411579280774e-10	9.02300315230346	-0.34694712421852425	
S(ph)HSDNDRPNCSWNTQYSSAYYTSR	ddPTM_K562_Methotrexat_30min_R1	2	SHSDNDRPNCSWNTQYSSAYYTSR	24	1	O75494-6;O75494-3	O75494-6	SRSF10	Serine/arginine-rich splicing factor 10	1	S(0.817)HS(0.181)DNDRPNCS(0.002)WNTQYSSAYYTSR;S(0.969)HS(0.031)DNDRPNCSWNTQYSSAYYTSR	101.66	1.1365e-06	65824000.0	266.83	214.47	267.18	55.088	188.29	128.4	61.917	0.0	243.99	430.8	True	False	255.10047269322067	249.90752213331527	211.10256923073362	50.25852056963762	213.0534353337723	153.2114827834422	75.80346338785156	0.0	232.6469581553334	352.77794546264903	0.7231191064358354	0.7083989386172517	0.5984006992100488	0.14246502996021	0.6039307107318298	0.4343000597231601	0.21487585707331977	0.0	0.659471378944139	1.0	8.4626165608566	-14.740705384225073	8.942459372058853	1.011692024373501	0.4710349065924977	0.0	0.2942588649873477	0.0	0.0	0.0	0.06769003757766438	1.81674768630196e-15	14.740705384225073	-0.5406571177810033	
S(ph)HSPSSPDPDTPSPVGDSR	ddPTM_K562_Methotrexat_30min_R1	1	SHSPSSPDPDTPSPVGDSR	19	0	E9PNJ4;Q13586;G0XQ39;H0YDB2	E9PNJ4	STIM1	Stromal interaction molecule 1	1	S(0.753)HS(0.213)PS(0.025)S(0.01)PDPDTPSPVGDSR	84.948	0.0033068000000000004	142690000.0	1989.1	1807.1	2760.0	2422.1	1804.3	2055.1	1657.4	2292.3	2458.8	2347.6	True	False	1901.6615456810905	2105.692559551984	2180.7137176316523	2209.758253552849	2041.5970756424945	2452.21898962813	2029.1141402042272	2211.678509711992	2344.4909246786083	1922.426891290887	0.9891983691531423	1.09533037073677	1.1343545637604606	1.14946282928295	1.061989449321314	1.2755850434351208	1.0554961280434967	1.1504617001205575	1.2195475080481788	1.0	10.908713019089706	-6.239432348389754	1.9371637707744418	1.1373600063670883	0.9381923432377313	0.23695464699889635	0.07579649129864338	1.1208810894178711	4.251802229324661	0.019157393714605408	0.407893042783895	5.761925671537399e-07	6.239432348389754	-0.19916766312935708	
S(ph)IDQDYER	ddPTM_K562_Methotrexat_30min_R1	1	SIDQDYER	8	0	Q9UDY2-7;A0A3B3ITE1;A0A1B0GTW1;A0A2R8YDH4;Q9UDY2-3;Q9UDY2;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3IRI3;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3ISZ5	Q9UDY2-7	TJP2	Tight junction protein ZO-2	1	S(1)IDQDYER	82.171	0.031762	17390000.0	1047.0	937.55	1274.6	1160.4	821.14	880.42	902.91	1206.2	984.93	1049.1	True	False	1000.9751336424023	1092.4642018748068	1007.0788784396024	1058.6695336372263	929.1343028837102	1050.548704612135	1105.4105516663435	1163.7772623193314	939.1408192792022	859.09782401315	1.1651468618166128	1.2716412163303126	1.1722516927527304	1.2323038239019233	1.081523287468469	1.222851083133525	1.2867109201866902	1.3546504598078435	1.0931709905772349	1.0	9.746678607731265	-9.994261757041025	24.015829305196355	0.9999999899058698	1.2211357063308677	0.5215684633040762	0.07058385011506939	56.05958461570607	234619.3533907074	0.07076716952525863	0.018272005999248598	1.0133004673595811e-10	9.994261757041025	0.22113571642499785	
S(ph)IEDDEEGHLICQSGDVLR	ddPTM_K562_Methotrexat_30min_R1	2	SIEDDEEGHLICQSGDVLR	19	0	A0A087WX74;B7ZL31;Q9HAZ1	A0A087WX74	CLK4	Dual specificity protein kinase CLK4	1	S(1)IEDDEEGHLICQSGDVLR;S(1)IEDDEEGHLICQSGDVLR	99.964	0.00051281	11499400.0	2161.54	2282.25	3502.4	2934.6000000000004	2316.2799999999997	2300.3	2007.8	2713.25	2668.21	2672.1000000000004	True	False	2066.521289754916	2659.3530208829147	2767.294103127935	2677.328174260431	2620.9114195916413	2744.80041936723	2458.1002598660834	2617.8234596152597	2544.1654994862183	2188.156796821599	0.9444118870990578	1.2153393325129855	1.2646690160172984	1.2235540790081296	1.1977713038657187	1.254389275647057	1.1233656854191574	1.196360088736681	1.16269798543767	1.0	11.095500405741362	-10.235071827619448	3.7003922697801355	1.0000009156331837	1.1845403385165973	0.26780307657202274	0.08688991787671685	3.184439033363275	48.73964723914605	0.08285744008230973	0.02182597390023822	5.820069521428542e-11	10.235071827619448	0.18453942288341363	
S(ph)IGASPNPFSVHTATAVPSGK	ddPTM_K562_Methotrexat_30min_R1	2	SIGASPNPFSVHTATAVPSGK	21	0	A0A087WU64;A6NMQ1;P09884	A0A087WU64	POLA1	DNA polymerase;DNA polymerase alpha catalytic subunit	1	S(0.942)IGAS(0.058)PNPFSVHTATAVPSGK;S(0.755)IGAS(0.244)PNPFSVHTATAVPSGK	100.7	6.9046e-05	31239000.0	10548.5	7705.1	12618.400000000001	10367.7	7148.5	7302.099999999999	6456.299999999999	8954.9	8969.2	10943.400000000001	True	False	10084.800570417263	8978.236810693374	9969.97028063885	9458.77983789268	8088.653048401247	8713.127480007579	7904.289624351725	8639.951091314362	8552.223849693903	8961.444216285872	1.1253543878663983	1.0018738714432862	1.1125405727036894	1.0554972624505083	0.902605969883908	0.9722905448848278	0.882033010927753	0.9641248534039578	0.9543354445203952	1.0	13.129515538794541	-7.682180483520676	6.22747929059533	0.94244637949927	1.0733962335342573	0.6683021415005486	0.0442075686277345	0.11904880406448627	7.350556795893501	0.01235498439535629	0.015931325527957133	2.0788325890952312e-08	7.682180483520676	0.13094985403498727	
S(ph)ILVSPTGPSR	ddPTM_K562_Methotrexat_30min_R1	2	SILVSPTGPSR	11	0	Q14684-2;Q14684	Q14684-2	RRP1B	Ribosomal RNA processing protein 1 homolog B	1	S(0.616)ILVS(0.08)PT(0.304)GPSR;S(0.578)ILVS(0.356)PT(0.066)GPSR	123.62	0.002131	169455000.0	5170.6	4213.2	5882.700000000001	5244.6	4229.0	4506.5	4052.2	4862.1	4594.5	4969.2	True	False	4943.306615101629	4909.359687844848	4648.001661852072	4784.8140607668	4785.187625612211	5377.317345510766	4961.009001409175	4691.097187135489	4380.902697834662	4069.2297274674893	1.214801558568709	1.2064592113604309	1.1422313246356788	1.1758525276833312	1.1759443300317927	1.3214582871086449	1.2191518625557398	1.1528219101198356	1.0765926210219505	1.0	11.990540014403427	-9.82165278358082	1.9801127735244257	1.0037220537515985	1.206614194203233	0.703616710287563	0.04470509542539112	0.183785122618339	1.4533019774632001	0.0462273464277098	0.013288706591499798	1.5078120731662636e-10	9.82165278358082	0.2028921404516344	
S(ph)IPNGLHDPSSTYIR	ddPTM_K562_Methotrexat_30min_R1	1	SIPNGLHDPSSTYIR	15	0	A6NKD9	A6NKD9	CCDC85C	Coiled-coil domain-containing protein 85C	1	S(1)IPNGLHDPSSTYIR	89.624	0.012333	0.0	802.75	621.44	590.3	642.46	738.55	999.41	884.47	608.43	817.04	802.78	True	False	767.4620711857101	724.1223973260948	466.4040969267984	586.1365292834988	835.6822702520454	1192.5318380732083	1082.8349122640475	587.0311720385932	779.0559887341018	657.3887629027511	1.1674402035667932	1.1015131961317322	0.7094798743856754	0.8916132467725301	1.2712147170907295	1.8140435391799086	1.647175877303874	0.8929741504045666	1.185076521986959	1.0	9.360602985646809	-7.836511352358225	5.720682613375138	1.3440464491696655	0.959404720081301	0.2473629582978405	0.2814972712924401	0.28988526864279196	16.321545669956826	0.09583546271413809	0.10998187433517814	1.4570976160348633e-08	7.836511352358225	-0.3846417290883646	
S(ph)IPSLQSEYVHY	ddPTM_K562_Methotrexat_30min_R1	1	SIPSLQSEYVHY	12	0	Q9UNH5	Q9UNH5	CDC14A	Dual specificity protein phosphatase CDC14A	1	S(0.935)IPS(0.065)LQSEYVHY	143.76	2.3414e-07	8968700.0	498.47	511.81	662.86	336.0	390.38	382.44	333.58	349.96	565.16	477.91	True	False	476.55785565112535	596.3779032174759	523.7347445178682	306.5434016736537	441.7218125529664	456.3411174119912	408.3938064977233	337.6517084407836	538.8858349566301	391.35586795741557	1.217709748772646	1.5238762263362033	1.338257037645484	0.783285563785157	1.1286960250741183	1.166051552500669	1.0435356664746922	0.8627741043032586	1.3769713937578358	1.0	8.61233726646317	-7.075327951504214	10.377689616420383	1.053796258815004	1.3858105080992102	0.41421558320919016	0.16811979921083364	0.514096848764582	69.05892547880407	0.04367998507203444	0.07579819252014287	8.407600135118345e-08	7.075327951504214	0.3320142492842062	
S(ph)IQDLTVTGTEPGQVSSR	ddPTM_K562_Methotrexat_30min_R1	4	SIQDLTVTGTEPGQVSSR	18	0	Q9UG54;O43318-4;O43318-2;O43318-3;O43318	Q9UG54	DKFZp586F0420;MAP3K7	Mitogen-activated protein kinase kinase kinase 7	1	S(1)IQDLTVTGTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR	285.1	2.6522999999999994e-155	344802000.0	2508.35	2744.49	3845.59	2953.17	2489.24	2574.2299999999996	2721.78	3017.21	2898.24	3203.31	True	False	2398.0859374134848	3197.9703241463276	3038.4532120967783	2694.2701711922164	2816.6186912222615	3071.663514997042	3332.2084496953453	2911.093014129092	2763.501454994521	2623.1595182914543	0.9141975242799695	1.2191291844230905	1.1583181239682356	1.0271087794718174	1.0737504416265211	1.1709785446055192	1.2703033980433323	1.1097659116153096	1.0535011064803546	1.0	11.357089827396667	-6.244590250732898	23.96285974894405	1.1268372363814316	0.9141972244139125	0.3625350140863971	0.08158500383958965	2147.0344639664413	3053431.559772398	0.0209591498520889	0.5439479017629659	5.693898869245676e-07	6.244590250732898	-0.21264001196751914	
S(ph)IQFVDWCPTGFK	ddPTM_K562_Methotrexat_30min_R1	2	SIQFVDWCPTGFK	13	0	P68363;P68366;P68363-2;P68366-2	P68363	TUBA1B;TUBA4A	Tubulin alpha-1B chain;Tubulin alpha-4A chain	1	S(0.998)IQFVDWCPT(0.002)GFK;S(1)IQFVDWCPTGFK	203.53	1.7876e-11	18091500.0	4654.9	2807.1000000000004	4693.8	4742.3	3003.6	2415.2	2775.3999999999996	4480.1	4454.1	6187.0	True	False	4450.276169619882	3270.92556245829	3708.635524572262	4326.549921895738	3398.62604688788	2881.90321821316	3397.8540996276183	4322.532343655148	4247.029863189765	5066.474346744218	0.8783773221865196	0.6456019193228975	0.7319953227347297	0.8539567410769652	0.6708069190307617	0.568818278940879	0.6706545552354615	0.8531637679035844	0.8382613968861723	1.0	12.306766439813392	-9.847423751133071	1.5163573968646233	0.9874486947387254	0.715867462617133	0.46272115529372393	0.09282099872276572	0.337038642015944	1.6507141768789828	0.09120998596663651	0.027430312619510275	1.4209416649852768e-10	9.847423751133071	-0.27158123212159246	
S(ph)IS(ph)NAAPSKEAFKMRS(ph)LR	ddPTM_K562_Methotrexat_30min_R1	1	SISNAAPSKEAFKMRSLR	18	3	Q5BKX8	Q5BKX8	MURC	Muscle-related coiled-coil protein	3	S(0.908)IS(0.972)NAAPS(0.12)KEAFKMRS(1)LR	41.482	0.034138	5316500.0	3009.2	2649.3	4114.2	3525.0	2683.4	2854.4	2491.9	3465.1	3423.8	3859.1	True	False	2876.9191711143417	3087.051794599677	3250.685643869618	3215.968722915566	3036.3141344449755	3405.9724023135327	3050.772007949147	3343.230468962622	3264.628285307718	3160.1795945564263	0.9103657197426325	0.9768596063075923	1.0286395271550683	1.0176537841251931	0.960804297222596	1.077778113680785	0.9653793136327633	1.0579241998529167	1.033051504709166	1.0	11.625790834461109	-6.379105470367514	2.419977254689277	1.017983614902868	0.8991138164335338	0.47572313029708757	0.03461373379122771	0.345625521802659	2.9628548024229717	0.008669431437538178	0.07640490209314456	4.1772890698398676e-07	6.379105470367514	-0.11886979846933421	
S(ph)ISADDDLQESSR	ddPTM_K562_Methotrexat_30min_R1	3	SISADDDLQESSR	13	0	A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MT02;A0A0A0MSN9;P18615-4;P18615;P18615-3	A2ABK4	NELFE	Negative elongation factor E	1	S(0.988)IS(0.012)ADDDLQESSR;S(0.987)IS(0.013)ADDDLQESSR;S(0.5)IS(0.5)ADDDLQESSR	236.42	4.083e-46	305798000.0	4386.45	3908.17	5511.590000000001	4234.9	3422.8999999999996	3343.91	2850.62	4005.73	3905.88	3851.8	True	False	4193.626910186927	4553.9286649683345	4354.782579333853	3863.632892106417	3873.0713463485563	3990.073281887697	3489.9440994020597	3864.846205430621	3724.2964913306027	3154.2016952948725	1.329536699077477	1.4437658415317691	1.3806290782957504	1.2249162435838532	1.2279085868624136	1.2650025798412623	1.1064429090276677	1.22530090932226	1.1807413891401244	1.0	11.623059200813966	-3.0000000000000524	0.0907027728704747	0.8361473877870844	2.4658462853999947	0.766387074596497	0.05908820790301487	72.37863912961414	0.47261282323841625	1.0999130040287899	14.675200443370333	0.0009999999999998792	3.0000000000000524	1.6296988976129103	
S(ph)ISNEGLTLNNSHVSK	ddPTM_K562_Methotrexat_30min_R1	1	SISNEGLTLNNSHVSK	16	0	Q08AD1-2;Q08AD1-3;Q08AD1	Q08AD1-2	CAMSAP2	Calmodulin-regulated spectrin-associated protein 2	1	S(0.864)IS(0.136)NEGLTLNNSHVSK	102.48	0.0011888	7758500.0	1440.2	1344.9	2484.9	2254.1	1119.5	1345.6	1193.5	1405.5	1822.6	1917.7	True	False	1376.8905324467873	1567.1218656086899	1963.3534481677136	2056.48655271602	1266.7338725166405	1605.6181560233633	1461.1727563254167	1356.067768355016	1737.867723816183	1570.3859471070607	0.876784802476915	0.9979214781535813	1.2502362567524061	1.3095421265736908	0.8066385685953169	1.0224353821945533	0.9304545541923406	0.8635251549806223	1.1066500735170577	1.0	10.616903452409638	-7.773860621231802	24.99994117801807	0.9502763534212346	1.110829453789117	0.23198705297141098	0.1367950376795722	349.2739824871983	702973.0561140524	0.04460419471246549	0.05092805284344818	1.683214170801505e-08	7.773860621231802	0.1605531003678824	
S(ph)ISNPPGSNLR	ddPTM_K562_Methotrexat_30min_R1	3	SISNPPGSNLR	11	0	F5GWT4;Q9H4A3-4;Q9H4A3-2;Q9H4A3;Q9H4A3-5;Q9H4A3-6;Q9H4A3-7	F5GWT4	WNK1	Serine/threonine-protein kinase WNK1	1	S(0.997)IS(0.003)NPPGS(0.001)NLR;S(0.746)IS(0.25)NPPGS(0.004)NLR;S(0.996)IS(0.004)NPPGSNLR	135.1	0.00022963	131183000.0	4776.9	4586.6	5375.7	5540.799999999999	4055.3999999999996	4796.5	4522.5	5167.1	5040.9	6745.9	True	False	4566.913195698555	5344.457691130058	4247.414033287127	5055.046666646968	4588.75618276372	5723.355741205455	5536.785748204188	4985.370164259842	4806.549659269725	5524.1521408924855	0.8267174906158036	0.9674711258525556	0.7688807123622978	0.9150810002546874	0.8306715792267007	1.0360604840765277	1.002286976714161	0.9024679330164868	0.8700972631961538	1.0	12.431537338126361	-8.244228089005388	24.99355644485969	0.9585933105513171	0.8654388078384858	0.355254290432068	0.06746327594596521	1040.4590244392882	1510915.0304808987	0.02240111594651055	0.022352468276355637	5.698649038501609e-09	8.244228089005388	-0.09315450271283132	
S(ph)KAPGSPLSSEGAAGEGVR	ddPTM_K562_Methotrexat_30min_R1	2	SKAPGSPLSSEGAAGEGVR	19	1	Q6JBY9;B7ZKW8	Q6JBY9	RCSD1	CapZ-interacting protein	1	S(0.938)KAPGS(0.047)PLS(0.011)S(0.003)EGAAGEGVR;S(0.981)KAPGS(0.018)PLS(0.001)SEGAAGEGVR	102.84	0.00040287	421010000.0	7618.1	5663.1	10742.3	9428.2	6110.2	6137.1	5374.7	6780.0	6653.6	8560.1	True	False	7283.217445655382	6598.8310187587	8487.638032215398	8601.64434422483	6913.7983991524525	7323.007717992699	6580.113291514219	6541.5435570594145	6344.275588271346	7009.782940935056	1.0390075565854613	0.9413745153538895	1.2108275111701543	1.2270913973660689	0.9863070593495724	1.04468394809039	0.9387042861325001	0.9332020138396494	0.9050602053913334	1.0	12.77515405630385	-8.460409600707676	1.68044448690599	0.937753771431914	1.0933073090355165	0.3679870099376604	0.08535525560107736	0.4271636977843512	2.41721248952662	0.04308003073677558	0.03378541579763145	3.46409983056889e-09	8.460409600707676	0.15555353760360258	
S(ph)KET(ph)T(ph)AT(ph)KNRVPS(ph)AGDVEK	ddPTM_K562_Methotrexat_30min_R1	1	SKETTATKNRVPSAGDVEK	19	3	Q15785	Q15785	TOMM34	Mitochondrial import receptor subunit TOM34	5	S(1)KET(1)T(1)AT(1)KNRVPS(1)AGDVEK	50.653	0.027644	0.0	341.79	422.2	462.98	256.6	352.58	240.95	219.78	221.13	209.71	478.4	True	False	326.76532084779024	491.9613738270419	365.80682499605143	234.10427639720106	398.9504499972458	287.5101773883988	269.07125964407203	213.35273256232284	199.96062787308887	391.7571242092184	0.8341017958700371	1.2557815631817568	0.9337592155712575	0.597575032923147	1.0183616974485086	0.7338990400461834	0.686831822617664	0.5446046016214412	0.5104198890491641	1.0	8.613815700510498	-7.510754971209014	0.774023140210607	0.662625972237846	1.06145808615413	0.25885847480233826	0.1963858941883732	0.9668324180872447	1.1549795645000702	0.10231286409393907	0.24827641150409172	3.084927974599896e-08	7.510754971209014	0.39883211391628404	
S(ph)KINLQDLQGACTK	ddPTM_K562_Methotrexat_30min_R1	1	SKINLQDLQGACTK	14	1	H0Y8F6;H0Y8K6;P04035-2;P04035;P04035-3	H0Y8F6	HMGCR	3-hydroxy-3-methylglutaryl-coenzyme A reductase	1	S(1)KINLQDLQGACTK	111.01	0.0012893	9216100.0	2676.5	1739.6	3345.8	2471.6	1618.3	1511.3	1403.8	1832.6	2033.1	2905.0	True	False	2558.844264750611	2027.0393318558085	2643.562303062312	2254.918665406555	1831.13481544768	1803.3373359082252	1718.6378846498699	1768.1464192724325	1938.5816247617047	2378.876349974454	1.0756524881077107	0.8520994930558606	1.1112651160245046	0.9478923380909521	0.7697477909969318	0.7580626609397292	0.7224578463980802	0.7432695773748055	0.8149148335442161	1.0	11.216064569491646	-7.676554505248168	4.392078765959813	0.7822681354442628	1.0011969205921236	0.4914871692979803	0.09733870789749147	0.16417207755642102	5.801900284417551	0.027844138894630947	0.035966610951609135	2.105937580980149e-08	7.676554505248168	0.21892878514786085	
S(ph)KKSSS(ph)ST(ph)T(ph)T(ph)NEK	ddPTM_K562_Methotrexat_30min_R1	1	SKKSSSSTTTNEK	13	2	O14497-2;O14497;A0A087WUV6;H0Y488;A0A1B0GTU5;O14497-3	O14497-2	ARID1A	AT-rich interactive domain-containing protein 1A	5	S(0.956)KKS(0.037)S(0.011)S(0.718)S(0.718)T(0.962)T(0.8)T(0.8)NEK	50.207	0.032286	4312800.0	0.0	68.118	66.803	155.04	118.64	137.51	68.597	0.0	0.0	0.0	True	False	0.0	79.37334169197173	52.78196321700986	141.44788391512878	134.2432395135098	164.0818613516444	83.98162343163352	0.0	0.0	0.0											0.0														
S(ph)LDGSGSEPAVCEMCGIVGTR	ddPTM_K562_Methotrexat_30min_R1	2	SLDGSGSEPAVCEMCGIVGTR	21	0	H7C228;Q969R5-2;Q969R5-3;Q969R5	H7C228	L3MBTL2	Lethal(3)malignant brain tumor-like protein 2	1	S(0.904)LDGS(0.096)GS(0.001)EPAVCEMCGIVGTR;S(0.998)LDGS(0.002)GSEPAVCEMCGIVGTR	229.48	7.4296e-52	36013000.0	1376.98	1033.02	1414.31	1202.98	1025.6	1051.3400000000001	832.44	900.3399999999999	1409.52	1521.6599999999999	True	False	1316.449607949297	1203.708996662272	1117.465658689718	1097.51661114694	1160.484376644096	1254.496575619502	1019.1358603062673	868.6745318824294	1343.9917228538277	1246.0726288131248	1.0564790346155069	0.9660022769369361	0.8967901491858433	0.8807806108319037	0.9313135926510553	1.0067603979186999	0.8178783778253655	0.6971299359250316	1.07858217232006	1.0	10.283172444657078	-6.404948433066007	2.2783870749787494	0.9020595006722066	1.0718089924195802	0.150192936201894	0.10114680814943011	0.7741949853834574	5.893506861192902	0.02685966545224474	0.23163412560205798	3.9359680728520276e-07	6.404948433066007	0.16974949174737353	
S(ph)LDYLNLDK	ddPTM_K562_Methotrexat_30min_R1	1	SLDYLNLDK	9	0	Q96GV9	Q96GV9	C5orf30	UNC119-binding protein C5orf30	1	S(1)LDYLNLDK	145.31	3.9571999999999995e-07	7242800.0	1314.0	964.77	1739.6	1501.2	1090.5	1110.2	923.07	1401.4	1132.0	1860.9	True	False	1256.238133339175	1124.1818442139165	1374.4817330405872	1369.59212676336	1233.9198642066956	1324.7304375870517	1130.0919448523694	1352.111967678918	1079.3735670799515	1523.8729775103138	0.8243719469267067	0.7377136157703852	0.9019660780954326	0.8987574075898268	0.8097261926795629	0.8693181499624602	0.741591957814424	0.8872865308550737	0.7083094083362641	1.0	10.573526936605303	-12.961350624379604	2.803205281763237	1.1378784547375371	0.8230436410671689	0.39018340019051045	0.06744513166714022	56045715.71745469	25466089.598776404	50183669.126288734	0.01625781892570761	1.0930735252630603e-13	12.961350624379604	-0.31483481367036825	
S(ph)LESINSR	ddPTM_K562_Methotrexat_30min_R1	1	SLESINSR	8	0	E5RJH3;A0A0C4DH44;E5RI99;P62888	E5RJH3	RPL30	60S ribosomal protein L30	1	S(1)LESINSR	105.17	0.013687000000000001	10759000.0	906.35	806.19	1040.2	1099.2	713.89	794.85	916.13	881.31	828.19	943.79	True	False	866.5079392328474	939.3991946130348	821.8762351740736	1002.8348426180961	807.7790480133128	948.4435131652567	1121.5954731901156	850.3138277687362	789.6876276677962	772.8604854879145	1.1211699336469665	1.2154835345476134	1.0634212132804473	1.2975625762326257	1.0451809390971178	1.2271859293808958	1.4512263134814574	1.100216460454599	1.0217725482099898	1.0	9.59406419634324	-9.516660937760333	23.76540592162625	1.0275888292098245	1.202284575154514	0.32798987309297	0.11098798131684717	188.8846694206387	721976.9106654446	0.07091662544132325	0.028892436438134793	3.0432600313817176e-10	9.516660937760333	0.1746957459446894	
S(ph)LGHPEPLSNGRPQGNSR	ddPTM_K562_Methotrexat_30min_R1	2	SLGHPEPLSNGRPQGNSR	18	1	P49768;P49768-2;P49768-7;G3V4M0;G3V2G7;G3V3P0;G3V3Z0;G3V499;H0YM52;G3V5B1;G3V4P4;G3V2B1;G3V449;P49768-4;P49768-3;P49768-5;P49768-6;G3V519	P49768	PSEN1	Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12	1	S(0.949)LGHPEPLS(0.048)NGRPQGNS(0.003)R;S(0.584)LGHPEPLS(0.413)NGRPQGNS(0.002)R	95.414	0.0013054	111493000.0	1472.3899999999999	818.03	1307.73	1622.1999999999998	1036.84	1008.1800000000001	1083.1	1352.6799999999998	1180.48	1227.38	True	False	1407.6654985900054	953.1955533674451	1033.2553441878404	1479.9842446279797	1173.202633658019	1202.9965164533542	1326.0127460209962	1305.1054776936778	1125.5997424616091	1005.0895884446288	1.4005373399284344	0.9483687467527253	1.0280231295468873	1.4724898771643313	1.1672617517345338	1.1969047637982055	1.3192980618503813	1.2984966640768034	1.1198999128062497	1.0	9.973108386110404	-5.935918868896732	18.932577250056095	1.1906942495848212	4.8292200453512315	0.15737540088692592	0.1532045713640451	327.46671537955626	102719.06741402722	0.037509142091445756	3020.0497085848747	1.1589938490445002e-06	5.935918868896732	3.6385257957664106	
S(ph)LGT(ph)DLMNEMRRITSDFR	ddPTM_K562_Methotrexat_30min_R1	1	SLGTDLMNEMRRITSDFR	18	2	P05556-2;P05556;P05556-5;P05556-4;P05556-3	P05556-2	ITGB1	Integrin beta-1	2	S(0.998)LGT(0.999)DLMNEMRRIT(0.002)S(0.002)DFR	40.52	0.033658	35312000.0	2153.7	2075.8	2505.0	2053.2	1769.0	1808.1	2015.5	2150.3	1910.4	2284.8	True	False	2059.0259267675647	2418.790667432908	1979.2347328504677	1873.1991437986494	2001.654506906597	2157.4897353640326	2467.527180874635	2074.6727301983574	1821.5859209801579	1871.0005798353297	1.1004945423099672	1.292779218510873	1.0578482733686079	1.0011750739080547	1.069831045740652	1.15312082669366	1.3188275874782502	1.1088573421933163	0.9735891803627763	1.0	10.869594290341492	-9.69306907858116	5.14439444791711	0.9867699929980058	1.1415481566569257	0.295165162953243	0.09416278602143255	0.2605354975677087	12.561395737517536	0.07593435484524926	0.026129281689539322	2.02736022335322e-10	9.69306907858116	0.15477816365891983	
S(ph)LHLSPQEQSASYQDR	ddPTM_K562_Methotrexat_30min_R1	1	SLHLSPQEQSASYQDR	16	0	Q5JW53;Q9H410-4;Q9H410	Q5JW53	DSN1	Kinetochore-associated protein DSN1 homolog	1	S(0.599)LHLS(0.401)PQEQSASYQDR	147.53	1.5717999999999999e-09	27305000.0	1682.7	1575.6	1788.4	1661.6	1761.6	1781.3	1538.0	1846.0	1709.7	1949.4	True	False	1608.7305228080904	1835.9411193791748	1413.0392799320457	1515.930107800426	1993.2812771999213	2125.5110146584543	1882.9356507989032	1781.0751336772391	1630.2164201736687	1596.34476992778	1.0077588207219614	1.150090603211131	0.8851717414377678	0.9496257552615078	1.2486533703431115	1.3314861893866539	1.1795294389219497	1.1157208437860304	1.0212182549058129	1.0	10.640556555363032	-6.241140532408748	21.60980516130159	1.1048336131478664	1.0077582299449042	0.03893879758344221	0.13043164684477776	2822.147518741814	3004097.546679707	0.036059558652233724	1.089240380802356	5.739307151618239e-07	6.241140532408748	-0.09707538320296227	
S(ph)LLGIDTEDAIQGR	ddPTM_K562_Methotrexat_30min_R1	2	SLLGIDTEDAIQGR	14	0	P49454	P49454	CENPF	Centromere protein F	1	S(1)LLGIDTEDAIQGR;S(0.999)LLGIDT(0.001)EDAIQGR	188.19	9.5303e-06	19485900.0	1446.27	1283.01	1747.6999999999998	1560.17	1201.9099999999999	976.49	1326.76	1300.31	1549.54	1723.1000000000001	True	False	1382.6937025148002	1495.0055950588194	1380.881653733636	1423.3923184201926	1359.9822319932778	1165.1828724548554	1624.3197035461321	1254.5773602772758	1477.5022236157847	1411.0298928196148	0.9799180793766237	1.0595137655598483	0.9786338764051735	1.00876127831415	0.963822410080675	0.8257676739409884	1.1511589597158054	0.8891217448060543	1.0471090875781097	1.0	10.462532836570189	-7.161434591527998	2.0713335387077354	0.9771848660164134	1.0172943863294504	0.01870581892282741	0.08439398550607112	1.381095953941751	11.518075257299962	0.02432455379634675	0.05274246209364544	6.895494374073065e-08	7.161434591527998	0.04010952031303694	
S(ph)LPAGDALYLSFNPPQPSR	ddPTM_K562_Methotrexat_30min_R1	1	SLPAGDALYLSFNPPQPSR	19	0	V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF0	V9GYM8;V9GYF0	ARHGEF2	Rho guanine nucleotide exchange factor 2	1	S(1)LPAGDALYLSFNPPQPSR	141.85	2.5435e-09	3967500.0	299.6	0.0	325.49	163.75	121.28	187.3	62.887	477.93	71.475	135.53	True	False	286.42994273091074	0.0	257.17409708403136	149.39429173827622	137.23044578724262	223.49307418488098	76.99101057983783	461.1209310066973	68.15214285074163	110.98420368744848	2.5808172083438925	0.0	2.317213518135247	1.3460860804930175	1.236486285685378	2.013737692025775	0.6937114293909644	4.154833892445604	0.6140706567816654	1.0	6.794210543075366														
S(ph)LPAS(ph)PSTSDFCQTR	ddPTM_K562_Methotrexat_30min_R1	1	SLPASPSTSDFCQTR	15	0	Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8;S4R2Y6	Q9Y2D8-2	SSX2IP	Afadin- and alpha-actinin-binding protein	2	S(1)LPAS(0.843)PS(0.096)T(0.026)S(0.034)DFCQTR	89.87700000000001	0.022816	23199000.0	1351.9	1371.7	1730.0	1576.3	1207.0	1024.1	1150.4	1616.9	1374.4	1560.3	True	False	1292.4720947193534	1598.3501100865797	1366.8966418488255	1438.1082263636329	1365.741656210438	1221.9928311411466	1408.4064841866436	1560.0327105323565	1310.5044439882379	1277.714550383869	1.0115499540418091	1.2509445944764273	1.0697981340497087	1.125531697147517	1.0688941875163922	0.9563895400377325	1.1022857051784456	1.2209555804648773	1.0256629257250907	1.0	10.319349849629749	-10.062137563873346	0.010035367275347365	1.4048352785742383e-05	2.1389856727205174	0.07207948968183742	0.08675072643688019	4762.31610407364	29.81755388315054	3221.992695852637	3128.9635654612457	8.666873068832584e-11	10.062137563873346	2.1389716243677315	
S(ph)LPASPSTSDFCQTR	ddPTM_K562_Methotrexat_30min_R1	1	SLPASPSTSDFCQTR	15	0	Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8;S4R2Y6	Q9Y2D8-2	SSX2IP	Afadin- and alpha-actinin-binding protein	1	S(0.999)LPAS(0.001)PSTSDFCQTR	87.083	0.027781999999999998	0.0	459.57	578.19	767.08	767.28	628.93	495.64	567.93	412.17	489.11	853.94	True	False	439.3678530735805	673.7260699503971	606.0803907684377	700.0137536790508	711.6453188404557	591.4154153176423	695.3027595307025	397.6737474798201	466.3713828573104	699.2831911522153	0.6283117607183294	0.9634524016518866	0.8667166584825149	1.0010447305699308	1.0176782851992643	0.8457452185332265	0.9943078402686124	0.5686876969322964	0.6669277751247903	1.0	9.44973301695209	-11.980432013659744	5.106378194543193	1.0000005543618273	0.8504779393713567	0.08226872890888215	0.1571040715232713	1.7446504232030055e-06	3.4832179156157366e-07	0.15957660094166826	0.038702769874943664	1.0460874367067281e-12	11.980432013659744	-0.1495226149904706	
S(ph)LPEEDVAEIQHAEEFLIKPESK	ddPTM_K562_Methotrexat_30min_R1	2	SLPEEDVAEIQHAEEFLIKPESK	23	1	O60832;O60832-2;H7C2Q9;H7C0M1;C9IYT0	O60832	DKC1	H/ACA ribonucleoprotein complex subunit 4	1	S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK	142.23	5.2180999999999995e-14	32221000.0	5209.9	2966.9	9936.4	5832.700000000001	3787.2	3494.8999999999996	2745.1400000000003	4127.6	4446.0	7601.400000000001	True	False	4980.879034158119	3457.1297963227194	7850.885428940267	5321.356246850957	4285.28318177313	4170.239962459906	3360.8075243394665	3982.429968454048	4239.306430421789	6224.712800927996	0.80017812764238	0.5553878398706719	1.261244603569475	0.8548757857643867	0.6884306664131186	0.6699489752905862	0.539913668601454	0.6397773031167537	0.6810445021318545	1.0	12.603791559556008	-7.7570969403850025	5.5923123912992425	0.674417803931042	0.8751195931483767	0.13639898470971712	0.19556446890916834	0.2910582980860333	29.451187334526992	0.06011109397542773	0.07357822590334147	1.7494561428355104e-08	7.7570969403850025	0.20070178921733473	
S(ph)LPGS(ph)LSEKSPS(ph)MEPS(ph)AAT(ph)PFRVTGFLSR	ddPTM_K562_Methotrexat_30min_R1	1	SLPGSLSEKSPSMEPSAATPFRVTGFLSR	29	2	F8WA47;Q5VWQ8-5;Q5VWQ8	F8WA47	DAB2IP	Disabled homolog 2-interacting protein	5	S(0.674)LPGS(0.674)LS(0.636)EKS(0.103)PS(0.928)MEPS(0.965)AAT(0.946)PFRVT(0.039)GFLS(0.035)R	44.3	0.014884	353140000.0	1281.0	1196.9	1513.3	1736.3	1359.0	1108.3	1357.9	1187.0	1481.5	1434.4	True	False	1224.6887738260905	1394.6673811785563	1195.6790104681086	1584.0812747796579	1537.7323204556617	1322.4632894773279	1662.4436412352609	1145.2525372019948	1412.6253883647948	1174.6162603798127	1.042628827077608	1.1873387319937065	1.0179316009821668	1.3485947097884072	1.309135904485466	1.125868365767139	1.4153078731412325	0.9750014330907328	1.202627135357399	1.0	10.197973799180767	-10.022929350838767	1.1995829858794989	1.0109436401529788	1.1967748461562489	0.1287297274964222	0.13858837365594384	1.0298566878525397	3.3228830398548155	0.12959258634326323	0.0406526282099935	9.485727604933734e-11	10.022929350838767	0.18583120600327008	
S(ph)LPLHGR	ddPTM_K562_Methotrexat_30min_R1	2	SLPLHGR	7	0	Q9BY07-5;E7EQT3	Q9BY07-5	SLC4A5	Anion exchange protein	1	S(1)LPLHGR;S(1)LPLHGR	106.29	0.011539	8847100.0	279.89	350.64	327.15	373.62	260.84	310.42	197.67000000000002	283.9	421.58	209.24200000000002	True	False	267.5863707308231	408.57730013906706	258.4856857692736	340.8653146824717	295.14503198502945	370.4042716949856	242.00252931951835	273.9150760839482	401.9808378176378	171.34624620356445	1.5616704576820581	2.384512699821069	1.5085576223373163	1.9893363422593662	1.7225065533935793	2.161729713383591	1.4123596791960773	1.5986056429770215	2.34601484843778	1.0	7.420770775896049	-12.73766850041468	2.9930383938813603	0.860927591136573	1.8480437921696058	0.36951975629536493	0.3345439718351151	138005470.80242753	102542041.71691193	140865969.50899446	0.08074899963578457	1.8294961487067865e-13	12.73766850041468	0.9871162010330328	
S(ph)LPTTVPES(ph)PNYR	ddPTM_K562_Methotrexat_30min_R1	6	SLPTTVPESPNYR	13	0	Q6PKG0;A0A0B4J210;Q6PKG0-3;E5RH50;H0YC33	Q6PKG0	LARP1	La-related protein 1	2	S(1)LPTTVPES(1)PNYR;S(1)LPTTVPES(1)PNYR;S(1)LPTTVPES(1)PNYR;S(1)LPTTVPES(1)PNYR;S(1)LPTTVPES(1)PNYR;S(0.997)LPT(0.019)T(0.003)VPES(0.982)PNYR	250.46	1.2057999999999998e-72	1364823000.0	17719.2	12707.3	17291.100000000002	17815.899999999998	12888.099999999999	12692.1	13899.400000000001	14959.300000000001	16137.0	18450.6	True	False	16940.285184371	14806.965337831294	13661.934406862561	16254.007707969184	14583.111051703185	15144.66869653993	17016.69426834478	14433.172939988037	15386.794392198924	15109.017550030527	1.1212036208361393	0.9800084809486093	0.9042238756837607	1.0757819066757484	0.9651925416999546	1.002359593957142	1.126260804979368	0.9552687917791767	1.0183848381437506	1.0	13.883122233183915														
S(ph)LPTTVPESPNYR	ddPTM_K562_Methotrexat_30min_R1	4	SLPTTVPESPNYR	13	0	Q6PKG0;A0A0B4J210;Q6PKG0-3;E5RH50;H0YC33	Q6PKG0	LARP1	La-related protein 1	1	S(1)LPTTVPESPNYR;S(1)LPTTVPESPNYR;S(1)LPTTVPESPNYR;S(1)LPTTVPESPNYR	273.74	4.0074999999999993e-122	2211680000.0	2592.5299999999997	2010.51	2977.1	3066.3599999999997	2432.58	2159.36	1939.8899999999999	2449.2	2505.6000000000004	2909.7700000000004	True	False	2478.565485407771	2342.712604673156	2352.2473944786907	2797.536979631028	2752.506908089799	2576.625759059609	2374.9597136724847	2363.060247780225	2389.115202893576	2382.7824567522084	1.0401979745923249	0.9831835877566143	0.9871851237669688	1.1740631091619418	1.1551650047992774	1.081351657495252	0.9967169713468571	0.9917230341712078	1.0026577105784131	1.0	11.21843152704583	-11.949887384502102	6.249632264884883	0.9999999870739616	1.047238853220728	0.04051784204809883	0.06654109701832538	1.3572763804292958e-08	2.4384811705567423e-09	0.07305090548800455	0.01771744213780895	1.122309439005048e-12	11.949887384502102	0.04723886614676631	
S(ph)LPVSVPVWGFK	ddPTM_K562_Methotrexat_30min_R1	2	SLPVSVPVWGFK	12	0	Q96B36;Q96B36-3;Q96B36-2	Q96B36	AKT1S1	Proline-rich AKT1 substrate 1	1	S(1)LPVSVPVWGFK;S(1)LPVSVPVWGFK	155.02	4.0653e-09	99154000.0	5718.1	2916.5	3650.8	5352.3	2725.6	2586.5	3125.2	6135.2	5346.4	7581.6	True	False	5466.739170659617	3398.4020529762415	2884.5469711339247	4883.0721689818365	3084.0641741235872	3086.30451884247	3826.1056540160803	5919.421538535535	5097.847030950755	6208.498772793918	0.8805251270428298	0.5473790327330466	0.4646126345025973	0.7865141554637661	0.4967487772790059	0.4971096285573697	0.6162690521551436	0.9534384647823174	0.8211078422516377	1.0	12.600028748780423	-9.254848823479126	22.061472749238057	0.9154548934431963	0.6023014497053333	0.5402528347727074	0.13160972536680363	77.07285117135102	258001.14041566415	0.06315666011086932	0.03520072198558467	5.560977994490949e-10	9.254848823479126	-0.313153443737863	
S(ph)LQTLPTDSSTFDTDTFCPPRPKPVAR	ddPTM_K562_Methotrexat_30min_R1	2	SLQTLPTDSSTFDTDTFCPPRPKPVAR	27	2	B0QY95;Q9NQG6	B0QY95	MIEF1	Mitochondrial dynamics protein MID51	1	S(0.986)LQT(0.014)LPTDSSTFDTDTFCPPRPKPVAR;S(0.994)LQT(0.003)LPT(0.001)DSS(0.001)T(0.001)FDTDTFCPPRPKPVAR	63.316	0.0024975	15616000.0	918.26	647.99	1273.97	863.8799999999999	523.73	662.75	803.78	977.0899999999999	758.25	985.99	True	False	877.8943898934785	755.0593335532568	1006.5811068301434	788.1449816602264	592.6096749023137	790.8170577470898	984.0481257471662	942.7251908801156	722.9991230020966	807.4176565615538	1.0872865892381582	0.9351533588808688	1.2466671971439682	0.9761304762848494	0.7339567943386136	0.9794398863096965	1.21875973079138	1.1675805987384258	0.8954462626951215	1.0	9.657171325707923	-11.678694767809393	17.59051949177515	0.9999996515204528	1.0287926684044426	0.002675193099641371	0.14997573265883593	0.0	0.0	0.15299253529624615	0.0371061401739683	2.0955847637674917e-12	11.678694767809393	0.02879301688398983	
S(ph)LRT(ph)AGS(ph)MPLGGR	ddPTM_K562_Methotrexat_30min_R1	3	SLRTAGSMPLGGR	13	1	C9JE72;A0A087WX19;A0A087WX45;Q6IPM2-4;Q6IPM2	C9JE72	IQCE	IQ domain-containing protein E	3	S(1)LRT(1)AGS(1)MPLGGR;S(1)LRT(1)AGS(1)MPLGGR;S(1)LRT(1)AGS(1)MPLGGR	104.05	0.0013050000000000002	74696000.0	0.0	0.0	0.0	0.0	0.0	53.056999999999995	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	63.30951434611441	0.0	0.0	0.0	0.0											0.0														
S(ph)LSASPALGSTK	ddPTM_K562_Methotrexat_30min_R1	3	SLSASPALGSTK	12	0	O95544;O95544-2	O95544	NADK	NAD kinase	1	S(0.992)LS(0.004)AS(0.004)PALGSTK;S(0.779)LS(0.217)AS(0.004)PALGSTK;S(0.892)LS(0.105)AS(0.003)PALGSTK	185.57	0.00013053	72921000.0	7539.1	5465.8	9033.7	7893.7	5238.9	4677.700000000001	5173.0	5777.299999999999	6256.8	7997.0	True	False	7207.690191063448	6368.9305472852875	7137.649822814877	7201.671576759886	5927.907177067822	5581.599322555353	6333.176932108401	5574.109084395189	5965.922733662406	6548.66580748562	1.100634908384623	0.9725539116693234	1.089939543816086	1.0997158487653824	0.9052083815747287	0.8523261816437729	0.9670942323654845	0.8511824008523325	0.9110134658028978	1.0	12.676985293756648	-7.7700965644976225	24.950261995591504	0.9065538107878929	1.0607875797303026	0.643400188931003	0.05492167719780256	109.31640851973177	315052.27164726664	0.016383711207368992	0.018864940654427443	1.697866093404705e-08	7.7700965644976225	0.1542337689424097	
S(ph)LSDSESDDSK	ddPTM_K562_Methotrexat_30min_R1	1	SLSDSESDDSK	11	0	Q13185;S4R2Y4	Q13185	CBX3	Chromobox protein homolog 3	1	S(0.76)LS(0.142)DS(0.097)ESDDSK	98.368	0.020777	0.0	458.69	484.64	733.73	429.89	420.35	399.32	347.78	564.79	549.62	676.46	True	False	438.5265368198979	564.7185225285117	579.7301000137215	392.20221114728287	475.63339286500224	476.4829385131162	425.7785179680381	544.9260155739809	524.0682861647379	553.9465389685785	0.7916405392412289	1.0194458901755938	1.0465452155241386	0.7080145529522476	0.8586268879856321	0.8601605118795476	0.7686274541236723	0.9837158953797358	0.946062930802903	1.0	9.113602939178108	-9.313392247149586	24.924539274227037	0.9736671785157807	0.8712297560336298	0.2093460396080582	0.09901624760131993	641.7943677549653	307899.0803243913	0.057029577627277214	0.02739614469418769	4.859680895757126e-10	9.313392247149586	-0.10243742248215082	
S(ph)LSDSESDDSKSK	ddPTM_K562_Methotrexat_30min_R1	1	SLSDSESDDSKSK	13	1	Q13185;S4R2Y4	Q13185	CBX3	Chromobox protein homolog 3	1	S(0.997)LSDS(0.002)ESDDSKSK	128.76	0.0011522	11361000.0	2024.0	1400.7	3583.0	2087.1	1424.8	1162.7	1076.7	1286.3	1601.3	2267.8	True	False	1935.0273834691707	1632.141867170862	2830.977264592104	1904.1271834317934	1612.1861737933975	1387.3753195662644	1318.177383104797	1241.0600999182195	1526.855912513362	1857.0794445686984	1.0419734002917551	0.8788756301968129	1.5244244250679273	1.025334262893649	0.8681298899239194	0.7470737580041862	0.7098120583693931	0.6682859495041432	0.8221812572310121	1.0	10.858819818747317	-7.773501710660313	3.030793556784517	0.769104659740588	1.1394932903363661	0.4491693536851825	0.1737957831940952	0.22181523760671074	4.198264832497985	0.05624759077097474	0.06962534552616015	1.684605791198269e-08	7.773501710660313	0.3703886305957782	
S(ph)LSEQPVMDTATATEQAK	ddPTM_K562_Methotrexat_30min_R1	1	SLSEQPVMDTATATEQAK	18	0	A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MT02;A0A0A0MSN9;P18615-4;P18615;P18615-3	A2ABK4	NELFE	Negative elongation factor E	1	S(0.5)LS(0.5)EQPVMDTATATEQAK	192.16	1.454e-15	21333000.0	1965.7	1233.7	2337.6	1624.8	941.96	912.19	883.28	1221.0	1258.3	1816.7	True	False	1879.2901816627214	1437.5479556855091	1846.969705194112	1482.3563066647405	1065.8442506081055	1088.457807478413	1081.3780244718173	1178.0567379306121	1199.8019076472633	1487.6780258170704	1.2632371716524935	0.966303145397319	1.241511720373573	0.9964228018025559	0.7164482045923324	0.7316487765426289	0.7268898281117631	0.7918761435516892	0.806492995679157	1.0	10.538846606256035	-7.578629813881182	4.23222501669226	0.7798470284968864	1.1369818429326035	0.694940102840736	0.10751146709017086	0.11003845114092224	4.084896768316391	0.03044217153937668	0.04072825043998452	2.6385795132550134e-08	7.578629813881182	0.35713481443571715	
S(ph)LSGSPLK	ddPTM_K562_Methotrexat_30min_R1	2	SLSGSPLK	8	0	Q9UIG0-2;Q9UIG0	Q9UIG0-2	BAZ1B	Tyrosine-protein kinase BAZ1B	1	S(0.895)LS(0.073)GS(0.031)PLK;S(0.494)LS(0.494)GS(0.011)PLK	122.33	0.0042236	144409000.0	9029.900000000001	6947.0	14070.8	9440.3	8269.2	6738.5	6054.200000000001	9019.6	8762.900000000001	11117.2	True	False	8632.956408096967	8094.873671190106	11117.531368859223	8612.683556011289	9356.744741951403	8040.6197565126595	7412.008463632459	8702.375555642047	8355.514691665116	9103.767352129433	0.9482839437980212	0.8891784420761434	1.2212011729692056	0.9460570797645355	1.0277882089949055	0.8832189406325178	0.8141693627417599	0.9559092647074843	0.9178084597812909	1.0	13.152247974532223	-8.260511092223755	24.98400492760694	0.9052122924740156	1.0085535153760197	0.19188032560222634	0.093735646670353	135.31141621463445	3641819.1645808956	0.03214198666878932	0.030392005219503603	5.48894536228443e-09	8.260511092223755	0.10334122290200409	
S(ph)LSIESLCPEDGHR	ddPTM_K562_Methotrexat_30min_R1	2	SLSIESLCPEDGHR	14	0	Q92502;Q92502-2	Q92502	STARD8	StAR-related lipid transfer protein 8	1	S(0.597)LS(0.403)IESLCPEDGHR;S(0.573)LS(0.427)IESLCPEDGHR	110.04	0.0013698	33504000.0	6611.2	5566.5	7277.4	6896.200000000001	5595.599999999999	5779.4	6056.6	7129.7	7497.0	7730.5	True	False	6320.579564027358	6486.269510677951	5749.973191555283	6291.620853041225	6331.519479280134	6896.187255441013	7414.946724726035	6878.944409847573	7148.46610635901	6330.431539923418	0.9984437118016477	1.0246172744735849	0.9083066699785909	0.9938691878053763	1.0001718586402608	1.0893707975435176	1.1713177337063085	1.08664699498998	1.129222559516928	1.0	12.628088134913902	-8.245882036435395	3.385785921018829	1.107293042465603	0.9811005347896178	0.5547045647591997	0.049235623239318974	0.17052383621094172	4.133484450673282	0.017194793875831123	0.016218616038096205	5.676987834623819e-09	8.245882036435395	-0.1261925076759851	
S(ph)LSLESTDR	ddPTM_K562_Methotrexat_30min_R1	1	SLSLESTDR	9	0	H0Y7V8;A0A0A0MRJ1;H0Y5V1;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-2;Q5VT25-6	H0Y7V8	CDC42BPA	Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha	1	S(0.999)LS(0.001)LESTDR	81.017	0.030170999999999996	4778900.0	624.57	804.75	873.25	900.17	731.31	544.09	456.82	851.3	618.15	869.73	True	False	597.1146506390022	937.7212590888494	689.9667586673329	821.2534937040857	827.4900833498384	649.2276921156001	559.2735136527663	821.3592964785665	589.4123414226783	712.2134691439869	0.8383928084885525	1.3166294934240734	0.9687639851807458	1.15310019998801	1.1618568297288776	0.9115633447594164	0.7852610739375092	1.1532487548512143	0.8275782008603348	1.0	9.476165909501942	-8.270390888627759	24.640640157689646	0.9357164886570151	1.0974846467831954	0.2031701074969351	0.15010852149471607	824.1198702353852	2268530.709484832	0.04957957498699059	0.044363968709281415	5.365486560369226e-09	8.270390888627759	0.16176815812618028	
S(ph)LSLQPQLTQR	ddPTM_K562_Methotrexat_30min_R1	4	SLSLQPQLTQR	11	0	P21731	P21731	TBXA2R	Thromboxane A2 receptor	1	S(0.575)LS(0.42)LQPQLT(0.004)QR;S(0.999)LS(0.001)LQPQLTQR;S(0.987)LS(0.013)LQPQLTQR;S(1)LSLQPQLTQR	131.32	0.00076354	65218000.0	2451.71	1609.22	2656.2	2404.59	2164.33	2042.8400000000001	1682.03	2260.62	2699.19	2439.24	True	False	2343.9357639946647	1875.1162529368858	2098.699919120722	2193.7833280668183	2448.9773312228144	2437.5899181411764	2059.268044677035	2181.112713268386	2573.705246048175	1997.4699992811325	1.173452299578077	0.938745640040511	1.0506790689602452	1.0982809898803672	1.2260396061538719	1.2203386879494753	1.0309381594808147	1.09193765816425	1.2884825539179179	1.0	10.963958119623417	-7.447920031624008	4.105134770888936	1.1469833830676703	1.0443105912843074	0.13466452540711882	0.09894985328677457	0.4053115706702973	12.880318329803252	0.028510685013052636	0.042464391082267586	3.565167742390164e-08	7.447920031624008	-0.10267279178336297	
S(ph)LSPDCGGSIEVMQSFLKMIGMMLDRK	ddPTM_K562_Methotrexat_30min_R1	1	SLSPDCGGSIEVMQSFLKMIGMMLDRK	27	2	A0A0A0MTB8;Q8NI36	A0A0A0MTB8	WDR36	WD repeat-containing protein 36	1	S(0.464)LS(0.464)PDCGGS(0.07)IEVMQS(0.002)FLKMIGMMLDRK	42.59	0.018119999999999997	10710000.0	1473.2	1326.4	1889.5	1976.2	1216.6	1499.5	1265.4	1594.4	2023.0	2482.4	True	False	1408.4398919598734	1545.5650550549242	1492.9197715452913	1802.9496142484365	1376.6042244785572	1789.2571529109937	1549.1981615870814	1538.3240482854771	1928.9511715571937	2032.8133050521822	0.6928525548605257	0.760308411605585	0.734410665177621	0.886923363679064	0.6771916639158458	0.8801876436287215	0.7620956423970836	0.756746349732293	0.9489071951482911	1.0	10.989262007841113	-15.999999999999998	0.10159242810826308	1.738967657075455	0.635573875988815	0.5320559905211797	0.07204274488286302	144.54185959456905	0.9938387222853288	22.14105281789408	1.1153404487770777	1.000000000000004e-16	15.999999999999998	-1.10339378108664	
S(ph)LSPDEERLVSDIIDPVALEIPLSK	ddPTM_K562_Methotrexat_30min_R1	2	SLSPDEERLVSDIIDPVALEIPLSK	25	1	Q5UIP0-2;Q5UIP0;H7C2B5	Q5UIP0-2	RIF1	Telomere-associated protein RIF1	1	S(0.483)LS(0.483)PDEERLVS(0.034)DIIDPVALEIPLSK;S(0.5)LS(0.5)PDEERLVSDIIDPVALEIPLSK	110.1	6.9673e-08	83193300.0	4005.8999999999996	3213.3	5092.1	5192.4	3048.5	2788.8	2735.3	4189.8	3678.5	5557.9	True	False	3829.8054325292246	3744.2432082388295	4023.337797663816	4737.190353721073	3449.431183891895	3327.6961307356996	3348.760653855812	4042.4423591987506	3507.4873379007095	4551.310452847854	0.8414731256429303	0.8226736556492152	0.8839954644593242	1.0408409627949922	0.7578984601530556	0.7311512069350241	0.735779439471201	0.8881930602359385	0.7706543805874632	1.0	12.152066283077186														
S(ph)LSPGAASSSSGDGDGKEGLEEPKGPR	ddPTM_K562_Methotrexat_30min_R1	1	SLSPGAASSSSGDGDGKEGLEEPKGPR	27	2	Q6ZN18-2;Q6ZN18	Q6ZN18-2	AEBP2	Zinc finger protein AEBP2	1	S(0.405)LS(0.362)PGAAS(0.111)S(0.04)S(0.04)S(0.04)GDGDGKEGLEEPKGPR	42.851000000000006	0.033442	11136000.0	757.33	536.83	1424.2	960.96	465.94	570.17	438.15	834.02	586.48	1058.5	True	False	724.0386800013371	625.5320329501919	1125.2798828445648	876.7141287866501	527.21927696329	680.3472830111776	536.416290895669	804.687043872964	559.2146728101152	866.795392925287	0.8353051780280346	0.721660541871511	1.2982070417413463	1.0114429955930995	0.6082395929493979	0.7848995144230304	0.6188499561417318	0.9283471629415126	0.6451518747958048	1.0	9.759547675207344	-7.742641667018866	24.926327538611886	0.7544280284559836	0.97283683849516	0.22689032299670853	0.18235583208360562	347.8423193467598	461247.4029040303	0.05431110629988007	0.06999301180084029	1.808665826562044e-08	7.742641667018866	0.21840881003917645	
S(ph)LSPGGAALGYR	ddPTM_K562_Methotrexat_30min_R1	6	SLSPGGAALGYR	12	0	A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37	A0A494C001	RBM15	Putative RNA-binding protein 15	1	S(0.999)LS(0.001)PGGAALGYR;S(0.999)LS(0.001)PGGAALGYR;S(0.854)LS(0.146)PGGAALGYR;S(0.999)LS(0.001)PGGAALGYR;S(0.991)LS(0.009)PGGAALGYR;S(0.999)LS(0.001)PGGAALGYR	187.78	1.1973e-06	4001620000.0	16854.4	14992.499999999998	19753.399999999998	17845.600000000002	15863.3	15455.8	15649.5	17383.0	16915.8	18674.8	True	False	16113.500756888723	17469.755796072775	15607.431286182991	16281.10395508141	17949.602000797866	18442.414607510324	19159.29874328832	16771.630037221803	16129.388150186436	15292.6127574881	1.0536787279203597	1.1423656685165606	1.0205863140385045	1.064638476973746	1.1737433155108672	1.205968849141224	1.2528466552523458	1.0967144923623007	1.0547176212441922	1.0	13.900547293131682	-5.103052012502621	12.063715503215215	1.1153511700951433	1.054857339873959	0.0	0.07996329703168302	0.0	0.0	0.019350307065781305	0.0	7.887656468532894e-06	5.103052012502621	-0.060493830221184375	
S(ph)LSPNHNTLQTLK	ddPTM_K562_Methotrexat_30min_R1	2	SLSPNHNTLQTLK	13	0	A0A499FJI4;O75592-2;O75592	A0A499FJI4	MYCBP2	E3 ubiquitin-protein ligase MYCBP2	1	S(0.5)LS(0.5)PNHNTLQTLK;S(0.775)LS(0.218)PNHNT(0.006)LQTLK	163.62	5.6562e-05	44958000.0	3358.7	2673.5	4366.299999999999	3738.7	2702.7	2385.2	2323.8999999999996	3351.6000000000004	3237.7	3937.0	True	False	3211.0555695938265	3115.2504332700064	3449.8732990199555	3410.933975706219	3058.1524227340083	2846.106142796465	2845.0937313989393	3233.7223282950345	3087.180033687948	3223.971149689991	0.9959938909200827	0.966277391647739	1.0700695319037477	1.057991469940482	0.9485669321290523	0.8827951649226574	0.882481138726231	1.0030245861865053	0.9575706141119791	1.0	11.654623118358796	-7.848514302318986	7.134830488834499	0.9388834723707856	1.0217334088031214	0.38837491614023634	0.04685549446014434	0.24048048328484878	16.628901968118058	0.015698871914936352	0.017875424900844143	1.4173780331463985e-08	7.848514302318986	0.08284993643233574	
S(ph)LSPS(ph)HLTEDR	ddPTM_K562_Methotrexat_30min_R1	1	SLSPSHLTEDR	11	0	Q5T200-2;Q5T200	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	2	S(0.826)LS(0.261)PS(0.457)HLT(0.457)EDR	117.27	0.004658	23093000.0	2641.7	2194.0	3357.4	2670.7	2158.0	2693.3	2639.3	3173.5	2885.2	3293.1	True	False	2525.5740310822675	2556.521208376435	2652.7276215856928	2436.563877529247	2441.814825271021	3213.7421073258956	3231.230210112836	3061.886206243078	2751.0676817483013	2696.6876792085645	0.9365467312193467	0.9480227273210718	0.9836984987316836	0.9035395149075403	0.9054866991448025	1.1917368600390084	1.1982218908869533	1.1354248509570428	1.0201654803999016	1.0	11.396972728093793	-8.254434442938335	24.99988082514927	1.12314337551088	0.937063508109986	0.6464868025218158	0.06377897694993848	338.4785072092707	1207995.7239257575	0.021754488963002503	0.02129602535564254	5.566286514086419e-09	8.254434442938335	-0.186079867400894	
S(ph)LSPSHLTEDR	ddPTM_K562_Methotrexat_30min_R1	2	SLSPSHLTEDR	11	0	Q5T200-2;Q5T200	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	1	S(0.946)LS(0.054)PSHLTEDR;S(0.577)LS(0.407)PS(0.016)HLTEDR	117.27	0.0018613	94626000.0	10989.2	9024.2	12677.9	11432.3	9898.7	8694.3	9211.4	10273.8	10549.9	10211.7	True	False	10506.12792609654	10515.295664827083	10016.982043754459	10430.048008790813	11200.55255371189	10374.35042651154	11277.29093222953	9912.464630754721	10059.43745171094	8362.262176603832	1.2563738979017993	1.2574702207073905	1.1978794532154526	1.247275891202298	1.339416573788981	1.240615303301203	1.3485933224841296	1.1853807524102853	1.2029564774775314	1.0	13.029677560638822	-10.248496086289418	1.302277016667936	1.0010781615100308	1.2651583730905063	0.7348640777085041	0.04733113293775546	0.4493429959178477	1.3918073139856795	0.04546333480992265	0.013698469829263428	5.642920265253599e-11	10.248496086289418	0.26408021158047545	
S(ph)LSPSHLTEDRQGR	ddPTM_K562_Methotrexat_30min_R1	1	SLSPSHLTEDRQGR	14	1	Q5T200-2;Q5T200	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	1	S(0.61)LS(0.271)PS(0.111)HLT(0.007)EDRQGR	89.506	0.011764	33918000.0	1534.8	1358.1	1685.0	2520.0	1230.3	1323.9	1401.9	1442.9	1256.5	2279.1	True	False	1467.3320297176306	1582.502941247053	1331.3415268874392	2299.0755125524042	1392.1060146111852	1579.7249381386218	1716.3117612841236	1392.1523891564946	1198.0855892543805	1866.3329050694585	0.7862113054600093	0.8479210418187197	0.7133462220331432	1.2318678550367415	0.7459044476094557	0.8464325597259026	0.9196171575939975	0.745929295558706	0.6419463462279746	1.0	10.865990632939377	-9.270041317569834	23.99954192465696	0.7704533568897107	0.8715143810131772	0.03682890000882599	0.15850332284875182	1067.0346364790094	2977013.700598769	0.08259259742783552	0.040734182617563855	5.369807070881754e-10	9.270041317569834	0.10106102412346651	
S(ph)LSPSLLGYQQPALMAAPLSLADAHR	ddPTM_K562_Methotrexat_30min_R1	2	SLSPSLLGYQQPALMAAPLSLADAHR	26	0	Q13469-3;Q13469-4;Q13469-2;Q13469;Q13469-5	Q13469-3	NFATC2	Nuclear factor of activated T-cells, cytoplasmic 2	1	S(0.526)LS(0.453)PS(0.021)LLGYQQPALMAAPLSLADAHR;S(0.479)LS(0.403)PS(0.119)LLGYQQPALMAAPLSLADAHR	124.37	1.9394e-09	27692000.0	876.25	322.79999999999995	173.42	490.0	453.28	368.02	559.6600000000001	1437.13	1768.0300000000002	1730.74	True	False	837.7310991921246	376.13721333815533	137.02151192452212	447.04246077407856	512.8942650597078	439.1346564950343	685.1780015124281	1386.585323326962	1685.8346712052712	1417.2862147865021	0.5910811030630952	0.2653925575610118	0.09667878689214714	0.315421441421005	0.3618847482665803	0.30984190201919437	0.4834436364116067	0.9783382557882532	1.189480751041682	1.0	10.468915418328423	-9.227469553140038	2.503982127370567	1.102492604006518	0.3128424762866849	0.8795258710323137	0.1219668268340391	0.09531170652967678	1.1570565869603797	0.07944126282517701	0.035928551791176204	5.922846084131841e-10	9.227469553140038	-0.7896501277198331	
S(ph)LSTSGESLYHVLGLDK	ddPTM_K562_Methotrexat_30min_R1	1	SLSTSGESLYHVLGLDK	17	0	Q9H3Z4-2;Q9H3Z4	Q9H3Z4-2	DNAJC5	DnaJ homolog subfamily C member 5	1	S(0.43)LS(0.37)T(0.047)S(0.054)GES(0.097)LY(0.003)HVLGLDK	96.79	0.0016535999999999999	80820000.0	5800.6	4165.7	7138.8	5413.4	4454.4	4024.5	3596.0	6166.4	6339.3	7673.7	True	False	5545.612569442325	4854.0111202067965	5640.463437474214	4938.815626845709	5040.231676407431	4802.177667149246	4402.494538538918	5949.524216851204	6044.5873266695535	6283.9185703266685	0.8825086619723714	0.7724497168260507	0.8976028849433348	0.7859451982982913	0.8020841804360643	0.7642011291848433	0.7005970063533231	0.9467856959422565	0.9619136943009952	1.0	12.617448770363092	-9.405110050742103	6.524785718551734	0.9722734035109581	0.8017482458880842	0.6724113866335447	0.054235095259325725	0.1467794151339875	7.2388951792163985	0.030885271095223554	0.014559969334026897	3.934503620293746e-10	9.405110050742103	-0.1705251576228739	
S(ph)LSTSGESLYHVLGLDKNATSDDIKK	ddPTM_K562_Methotrexat_30min_R1	1	SLSTSGESLYHVLGLDKNATSDDIKK	26	2	Q9H3Z4-2;Q9H3Z4	Q9H3Z4-2	DNAJC5	DnaJ homolog subfamily C member 5	1	S(0.51)LS(0.436)T(0.037)S(0.012)GES(0.004)LYHVLGLDKNATSDDIKK	67.218	0.00085708	18679000.0	2250.9	1611.5	4890.4	2895.8	1226.1	1021.9	966.57	2031.8	2136.8	4302.3	True	False	2151.9531311515607	1877.772984183511	3863.9718712702293	2641.929710019543	1387.3536409938838	1219.3677122772554	1183.347927173404	1960.340442364798	2037.4606343961482	3523.1117798606183	0.6108103476741509	0.5329870584627887	1.0967497237408392	0.7498852932006782	0.3937864387171872	0.3461053149796729	0.3358814596624067	0.5564230046775164	0.5783127989418362	1.0	11.782634533463824	-7.74575700922306	23.853687188678208	0.49349686822870764	0.7572169180723196	0.16037182772294623	0.22611018094969232	210.74951659693593	320557.9749335848	0.06681382939573526	0.08590268014268337	1.7957380737247788e-08	7.74575700922306	0.26372004984361197	
S(ph)LSVPVDLSR	ddPTM_K562_Methotrexat_30min_R1	1	SLSVPVDLSR	10	0	Q9NYF3;D6RHW3	Q9NYF3	FAM53C	Protein FAM53C	1	S(0.8)LS(0.125)VPVDLS(0.076)R	111.5	0.0026636999999999997	79822000.0	4503.0	3648.6	4661.2	4138.3	3913.6	3665.2	3590.1	5296.9	4748.9	5151.1	True	False	4305.0535117399595	4251.469134403945	3682.8778190669036	3775.5016641252446	4428.306997303368	4373.448027241998	4395.271313350548	5110.605024688497	4528.12467553532	4218.18587482045	1.0205936010165049	1.007890420330259	0.8730951950342083	0.8950534130471316	1.0498131492348857	1.036807802460378	1.041981421346833	1.211564681204579	1.0734768001962605	1.0	12.04240695370866	-8.253972920373654	1.567660517060441	1.0971578823478123	0.9519168672881243	0.3940868225370777	0.06915998418938474	0.3753712284061042	1.836866683511938	0.03162352882660297	0.028873993200654938	5.572204922983069e-09	8.253972920373654	-0.145241015059688	
S(ph)LSYS(ph)PVER	ddPTM_K562_Methotrexat_30min_R1	2	SLSYSPVER	9	0	Q9UQ35;Q9UQ35-2;I3L4U6	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	S(0.894)LS(0.16)Y(0.005)S(0.941)PVER;S(0.996)LS(0.024)Y(0.001)S(0.978)PVER	126.66	0.0041297	138036000.0	12091.900000000001	10840.099999999999	15481.599999999999	12754.400000000001	10673.2	10492.7	10882.7	11901.099999999999	12275.900000000001	13775.7	True	False	11560.354554432248	12631.242274804643	12232.22372858195	11636.241554483488	12076.912879092997	12520.265774157513	13323.422501267376	11482.531567392301	11705.19608844238	11280.787240737727	1.0247826067213583	1.119712836103325	1.0843413201171235	1.0315097081577895	1.070573588648163	1.1098751804256817	1.1810720490457602	1.0178838872101075	1.0376222721559722	1.0	13.461580130679572														
S(ph)LTNSHLEK	ddPTM_K562_Methotrexat_30min_R1	3	SLTNSHLEK	9	0	F8VX12;F8VX04;Q9H2H9	F8VX12	SLC38A1	Sodium-coupled neutral amino acid transporter 1	1	S(0.681)LT(0.132)NS(0.187)HLEK;S(0.881)LT(0.106)NS(0.013)HLEK;S(0.965)LT(0.035)NSHLEK	112.08	0.0027184	170125000.0	12865.0	10206.4	20701.6	14905.9	11527.8	9950.2	8717.1	12994.5	13013.699999999999	16166.6	True	False	12299.470004116045	11892.83412086292	16356.617064102687	13599.122889902725	13043.907758461202	11872.935327038993	10672.131574498773	12537.476069647279	12408.695927480883	13238.672082443036	0.9290561717611732	0.8983404110926693	1.2355179554446878	1.0272271119954481	0.9852882280965228	0.8968373302927213	0.8061330855571249	0.9470342638272856	0.937306691351404	1.0	13.692470798057647	-8.081460037034724	3.4636483017510677	0.9076864570798686	1.0274847486341268	0.21013883397930566	0.09546527868598892	0.3793978966629631	8.701090448389486	0.03443136221272751	0.035428015854629485	8.289721932331033e-09	8.081460037034724	0.11979829155425814	
S(ph)MAWCENSICVGFKR	ddPTM_K562_Methotrexat_30min_R1	1	SMAWCENSICVGFKR	15	1	Q96JC1-2;Q96JC1	Q96JC1-2	VPS39	Vam6/Vps39-like protein	1	S(1)MAWCENSICVGFKR	62.042	0.024708	15289000.0	313.86	192.3	274.69	293.02	277.43	205.04	387.1	389.6	322.41	362.05	True	False	300.06309020535286	224.07430645888255	217.03632286095598	267.331391542899	313.9169077733733	244.66107811461828	473.9170288844316	375.89754717261786	307.42122947194974	296.47923666377	1.012088042258579	0.7557841452249819	0.7320456073188413	0.901686723667847	1.0588158257078182	0.8252216272132492	1.5984830311132026	1.2678714078008582	1.0369064388161144	1.0	8.211787261793518	-8.722864325330304	24.99996170799086	1.2481385720846863	0.8775115001335385	0.46997223061838334	0.17877400810359398	134.11257233474836	86916.35374827715	0.06894637938713304	0.05340466482189961	1.8929348838207384e-09	8.722864325330304	-0.37062707195114775	
S(ph)MDELNHDFQALALEGR	ddPTM_K562_Methotrexat_30min_R1	3	SMDELNHDFQALALEGR	17	0	Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2;E9PR38;Q14671-4	Q5T1Z4	PUM1	Pumilio homolog 1	1	S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR	123.19	0.00013765	53849000.0	3372.08	2939.42	4061.7999999999997	4045.6099999999997	3147.73	3152.31	3028.6499999999996	3431.16	4336.9	4576.68	True	False	3223.847400814585	3425.1091934028545	3209.2836877812465	3690.9376525147354	3561.7116681883026	3761.449293559756	3707.901858772497	3310.484157999997	4135.278465608692	3747.7989030640565	0.8601975410630733	0.9138988729098076	0.8563116033673683	0.9848280945642965	0.9503475934304757	1.0036422419795628	0.9893545397382604	0.8833142448740973	1.1033885682147586	1.0	11.871827828551487	-7.26902967196284	24.59070359136928	0.9821368576311013	0.8805122917877662	0.4740068301924185	0.05332202383020795	404.98287804217085	1312046.6842610901	0.014145833538438535	0.021450430055303924	5.3823300798642975e-08	7.26902967196284	-0.10162456584333501	
S(ph)MSAPSDLEMIGNEDLEFTR	ddPTM_K562_Methotrexat_30min_R1	1	SMSAPSDLEMIGNEDLEFTR	20	0	F8VWT9;J3KPF0;Q9Y4D8-2;Q9Y4D8-4;Q9Y4D8	F8VWT9	HECTD4	Probable E3 ubiquitin-protein ligase HECTD4	1	S(0.452)MS(0.452)APS(0.097)DLEMIGNEDLEFTR	56.327	0.033434	9344200.0	1366.5	980.49	1671.7	1556.6	1201.5	1021.1	1196.4	1631.8	1459.7	1952.1	True	False	1306.4302962009003	1142.4993070196037	1320.8330151321861	1420.1352947774083	1359.5183098068276	1218.4131235994769	1464.7231551468194	1574.408669086955	1391.838865606541	1598.555773764245	0.8172566247873517	0.7147071911849974	0.826266456766733	0.888386453625765	0.8504666099985131	0.7621961920855496	0.9162790433628228	0.9848944246590602	0.8706852075164501	1.0	10.642553365426979	-8.656761065974774	0.26719605040784566	1.0183289072709398	0.7281928168467533	0.5514678213636816	0.05719015076097166	1.8998525259506465	0.373775459624231	0.11267530330732653	0.19707454462001506	2.2041387715828807e-09	8.656761065974774	-0.29013609042418653	
S(ph)MSAPVIFDR	ddPTM_K562_Methotrexat_30min_R1	1	SMSAPVIFDR	10	0	D6RC15;O60749	D6RC15	SNX2	Sorting nexin-2	1	S(0.977)MS(0.023)APVIFDR	166.29	1.7504e-05	34045000.0	2641.2	2214.7	3089.2	3402.0	2110.9	2364.4	2599.0	2849.8	2960.1	3208.4	True	False	2525.0960104835826	2580.6415315365953	2440.8191364158333	3103.7519419457426	2388.5203497055613	2821.2868371742284	3181.8919092499004	2749.5709187179827	2822.4855970966105	2627.3276699683456	0.9610891094196885	0.9822305611266551	0.9290120772964876	1.1813341660513692	0.9091063809845761	1.0738237447208934	1.2110754001567823	1.0465275991825984	1.0742800105822417	1.0	11.359380423602904	-7.2312758146626095	24.92400429762625	1.0720406489452639	0.9599225657830787	0.2930245682707733	0.08070114906783701	886.1798519236187	732245.2279458027	0.021933107914667856	0.03798258154352439	5.871163642901208e-08	7.2312758146626095	-0.11211808316218519	
S(ph)MSIDDTPR	ddPTM_K562_Methotrexat_30min_R1	2	SMSIDDTPR	9	0	Q96N67-4;Q96N67-3;Q96N67-2;Q96N67-6;Q96N67-5;Q96N67;A0A0C4DGY6;A0A1B0GVW2;A0A1B0GUE9;Q96N67-7	Q96N67-4	DOCK7	Dedicator of cytokinesis protein 7	1	S(0.519)MS(0.481)IDDTPR;S(0.532)MS(0.468)IDDTPR	112.85	0.0031254	57509000.0	9471.8	7483.0	9827.900000000001	9893.5	7050.799999999999	6831.5	7485.8	7825.0	8672.7	9327.3	True	False	9055.431013213083	8719.438560747887	7765.158096200043	9026.152215649681	7978.103785922575	8151.5906903044015	9164.68120594956	7549.79031474778	8269.508069977293	7638.035586615055	1.1855706759316338	1.141581295592271	1.016643351309826	1.1817373869620575	1.0445229922603998	1.0672365424153436	1.1998741171106626	0.9884466011101184	1.0826747239131531	1.0	12.898985926344622	-3.000000004897934	0.044505626927380686	0.7777502444406813	1.634091021118893	0.26527013948985534	0.06567792157869659	892.0331327025051	3.0185592560988836	14.872821344652797	54.983242231229035	0.0009999999887220902	3.000000004897934	0.8563407766782117	
S(ph)NPSIQATLNK	ddPTM_K562_Methotrexat_30min_R1	2	SNPSIQATLNK	11	0	Q6UUV7;Q6UUV7-3	Q6UUV7	CRTC3	CREB-regulated transcription coactivator 3	1	S(0.998)NPS(0.002)IQATLNK;S(0.996)NPS(0.004)IQATLNK	148.41	8.3136e-08	9585600.0	2549.7	1644.29	2724.6	1761.8600000000001	1926.13	1750.4499999999998	1541.9899999999998	2100.21	2391.9	2800.0	True	False	2437.6182409245766	1915.9809743488095	2152.7436938620276	1607.400469264118	2179.4498560701004	2088.699688771623	1887.8205098669705	2026.3444238896398	2280.7010910764443	2292.8928674452577	1.0631191171354517	0.8356173118910681	0.9388767021900224	0.7010360109214716	0.9505240680950107	0.9109451725491445	0.8233356807334749	0.8837501536421078	0.9946827972026459	1.0	11.162953233032084	-9.764683643715708	7.214939636856973	0.9985362069588828	0.8825997199615727	0.18997306835075733	0.08936551856076322	0.19579467108848186	59.39084743623634	0.07043078291498857	0.021766957293479487	1.719160231533114e-10	9.764683643715708	-0.11593648699731007	
S(ph)NQIPTEVR	ddPTM_K562_Methotrexat_30min_R1	3	SNQIPTEVR	9	0	Q9BWH2	Q9BWH2	FUNDC2	FUN14 domain-containing protein 2	1	S(1)NQIPTEVR;S(1)NQIPTEVR;S(1)NQIPTEVR	118.61	0.0046168	65699000.0	3870.7000000000003	2937.19	4115.299999999999	3443.8999999999996	2961.79	2983.34	2989.9300000000003	3380.22	3485.4500000000003	3160.3900000000003	True	False	3700.5486626453167	3422.510723806371	3251.554768902006	3141.9786339996926	3351.317299045161	3559.8282324544757	3660.4979131294954	3261.3357466730663	3323.4121902639713	2588.012746194755	1.4298803852826312	1.3224473986222083	1.2563905543675857	1.2140506798583017	1.2949384828079842	1.375506452852141	1.4144049014100308	1.260169893470703	1.284156036383708	1.0	11.3376290074124	-10.484545250577845	1.472738116617348	1.00015253044164	1.320259370002369	0.6821447195777204	0.065535822910891	1.5834796023142483	4.127206128550865	0.0684817117209693	0.019883647177870282	3.2768363258540333e-11	10.484545250577845	0.32010683956072894	
S(ph)NSAPLIHGLSDTSPVFQAEAPSAR	ddPTM_K562_Methotrexat_30min_R1	1	SNSAPLIHGLSDTSPVFQAEAPSAR	25	0	Q96E09	Q96E09	FAM122A	Protein FAM122A	1	S(0.672)NS(0.328)APLIHGLSDTSPVFQAEAPSAR	126.62	1.5564e-10	209830000.0	1559.9	1135.9	1163.6	1444.0	1040.7	786.56	1016.7	1413.9	1221.6	1323.2	True	False	1491.328663771522	1323.5881680012717	919.3762615348511	1317.4067619546306	1177.5702913158261	938.5515879917778	1244.720855765439	1364.1723355938507	1164.8080826368105	1083.5556579298443	1.376328620368922	1.2215230092840959	0.8484808831060313	1.2158182667529638	1.0867649323760615	0.8661775526924941	1.1487373506438092	1.2589776312922683	1.0749868491870558	1.0	10.081557545483667	-6.527326777400158	24.995641497351354	1.071543652680923	1.337627296250735	0.3818554892618836	0.12676655374711557	109.29833923604576	614203.7137584471	0.032808864295268504	0.08754158255168312	2.969430893834222e-07	6.527326777400158	0.26608364356981196	
S(ph)NSFNNPLGNR	ddPTM_K562_Methotrexat_30min_R1	2	SNSFNNPLGNR	11	0	O95835-2;O95835	O95835-2	LATS1	Serine/threonine-protein kinase LATS1	1	S(0.987)NS(0.013)FNNPLGNR;S(0.742)NS(0.258)FNNPLGNR	166.45	1.8204e-05	319940000.0	4045.0	3048.8	5001.3	4201.1	3414.8	2868.5	3084.1	3954.0	3779.3	4693.6	True	False	3867.18664334624	3552.562379260745	3951.595476808398	3832.7960856285326	3863.906054372329	3422.7970277593777	3775.787932788619	3814.935578851464	3603.6011679021726	3843.543558086094	1.0061513769527617	0.9242935134133762	1.0281125781689096	0.9972037594227465	1.0052978445485277	0.8905316086657729	0.9823715734520739	0.9925568739361769	0.937572610650105	1.0	11.908221302983758														
S(ph)NSPLPVPPSK	ddPTM_K562_Methotrexat_30min_R1	1	SNSPLPVPPSK	11	0	Q13247-3;Q13247	Q13247-3	SRSF6	Serine/arginine-rich splicing factor 6	1	S(0.884)NS(0.116)PLPVPPSK	123.95	0.0020640999999999997	114990000.0	4677.0	4072.6	8773.9	5106.3	4373.0	3521.1	3662.8	4724.3	4628.4	6000.3	True	False	4471.404680081676	4745.527927636217	6932.378292437804	4658.6386070422	4948.126149634003	4201.502741657152	4484.276138976738	4558.143691241267	4413.226694233966	4913.587525904207	0.9100081471040531	0.9657969665988472	1.4108588187125242	0.9481134878501853	1.0070292069791593	0.8550784369886612	0.9126277114910117	0.9276610352844931	0.8981679212932787	1.0	12.262561039531734	-7.486411992581182	24.992462100739523	0.9296454281140529	1.0987300864567104	0.24218684112169264	0.129805298568448	813.0260474100016	557206.8570672857	0.037254476101328884	0.05523632404719255	3.262781621935298e-08	7.486411992581182	0.1690846583426575	
S(ph)NSSGNLHMAGLTASPTPPSSSIITY	ddPTM_K562_Methotrexat_30min_R1	1	SNSSGNLHMAGLTASPTPPSSSIITY	26	0	Q9UKI8-4;Q9UKI8-5;Q9UKI8;Q9UKI8-2;Q9UKI8-3	Q9UKI8-4	TLK1	Serine/threonine-protein kinase tousled-like 1	1	S(0.771)NS(0.163)S(0.066)GNLHMAGLTASPTPPSSSIITY	71.15899999999999	0.0050425	0.0	330.27	368.84	617.67	524.95	472.26	408.04	402.12	579.58	660.65	494.24	True	False	315.75172625413205	429.78454079196143	488.0295079599791	478.92844853745424	534.3704677398022	486.88795510090125	492.3056462283844	559.1958428909285	629.9365256990899	404.7283467164802	0.7801571815164261	1.061908671035176	1.2058199330966382	1.1833330984176225	1.320318856030459	1.2029993921873119	1.2163853859568026	1.3816572212636633	1.556442811109478	1.0	8.660810087052669	-5.7474447853893	0.7893508989793553	1.2935496687280914	1.996203953001251e-19	0.5520119142790129	0.1354649820661722	3.8613985744584216	1.0494176126989745	0.0499115107508258	5.289538918937475	1.7887729326947184e-06	5.7474447853893	-1.2935496687280914	
S(ph)NSVSLVPPGSSHTLPR	ddPTM_K562_Methotrexat_30min_R1	1	SNSVSLVPPGSSHTLPR	17	0	Q6R327-3;Q6R327	Q6R327-3	RICTOR	Rapamycin-insensitive companion of mTOR	1	S(0.494)NS(0.494)VS(0.013)LVPPGSSHTLPR	92.897	0.0033900999999999996	8940400.0	2059.5	1744.0	2009.7	2134.5	1582.6	1536.5	1459.7	1737.0	1928.2	2426.9	True	False	1968.9668459756692	2032.1663570685976	1587.891434175482	1947.3716990250416	1790.7396397006116	1833.4068792582466	1787.0748826210386	1675.9087254590265	1838.558402865337	1987.364892858177	0.9907424917544718	1.0225431496608497	0.7989934006994646	0.9798762703432794	0.9010623293869381	0.9225315823212958	0.8992183010996604	0.843281840934997	0.9251237200940838	1.0	10.95664106957283	-6.710796848920265	24.999917673189	0.9055793250647854	1.0066432772164615	0.3303286548946994	0.05559925416420601	109.99808761882012	54299.4093725054	0.013188764850097267	0.03489408858578334	1.946270280725539e-07	6.710796848920265	0.10106395215167607	
S(ph)PARTPPSEEDSAEAER	ddPTM_K562_Methotrexat_30min_R1	1	SPARTPPSEEDSAEAER	17	1	K7EMD6;O43765	K7EMD6	SGTA	Small glutamine-rich tetratricopeptide repeat-containing protein alpha	1	S(0.585)PART(0.323)PPS(0.091)EEDSAEAER	123.59	0.00042161	12447000.0	1002.3	735.8	1295.6	985.7	941.22	750.29	705.96	1175.0	1068.5	1158.1	True	False	958.2400921201331	857.3784435384591	1023.6712654215826	899.285211397978	1065.0069276374377	895.2729238129967	864.2895006748982	1133.6745840036606	1018.8256682199013	948.3568677815545	1.0104214190610523	0.9040673112265041	1.0794156716724237	0.9482561279928646	1.1230022830211133	0.9440253497686641	0.911354712595364	1.1954092626076627	1.0743062056409114	1.0	9.88928623887396	-9.256740110978944	24.99976211426738	1.101143299423733	0.990784439281847	0.24993285454435987	0.07961341329995247	495.5667902136167	2636399.764161142	0.03760835594678156	0.020815521069104063	5.536813421965695e-10	9.256740110978944	-0.1103588601418859	
S(ph)PASPRVPPVPDYVAHPER	ddPTM_K562_Methotrexat_30min_R1	2	SPASPRVPPVPDYVAHPER	19	1	A6NCC9;E9PME3;C9JHT9;C9JJV1;Q9Y5U2-2;Q9Y5U2	A6NCC9	TSSC4	Protein TSSC4	1	S(0.5)PAS(0.5)PRVPPVPDYVAHPER;S(0.5)PAS(0.5)PRVPPVPDYVAHPER	92.307	0.0018139	44431000.0	3915.3999999999996	3634.3999999999996	4468.5	4954.8	3588.3	3656.4	3799.3	3605.0	3729.1	4278.700000000001	True	False	3743.2837041675853	4234.922825762678	3530.6229156655913	4520.420376823274	4060.2243454680292	4362.947551786434	4651.389738673777	3478.2101066665464	3555.7349549450946	3503.785968549294	1.0683539855938897	1.208670524905408	1.0076594139474246	1.2901531136317972	1.1588106071299562	1.2452094936589027	1.3275324978253842	0.9927005067911334	1.0148265296060048	1.0	11.774698934160696	-9.293147525930532	24.84460519571046	1.0028225603763816	1.1857566236508228	0.46608910394740066	0.09030023678351054	585.873087776239	459051.7194735727	0.0495264692888282	0.02379469394330049	5.091578853224719e-10	9.293147525930532	0.18293406327444117	
S(ph)PDEALPGGLSGCSSGSGHSPYALER	ddPTM_K562_Methotrexat_30min_R1	1	SPDEALPGGLSGCSSGSGHSPYALER	26	0	Q5JSZ5-5;Q5JSZ5;H0Y412;A0A494C065;A0A494C0D3	Q5JSZ5-5	PRRC2B	Protein PRRC2B	1	S(1)PDEALPGGLSGCSSGSGHSPYALER	63.277	0.0019407	15518000.0	348.03	234.01	329.56	155.55	206.38	247.82	279.22	294.57	350.8	390.88	True	False	332.7310179193554	272.6761750101046	260.3898597038721	141.91317300695496	233.52258741401005	295.70770765882116	341.84219272826374	284.20980613613466	334.4913845685927	320.0878442953579	1.0394990745488326	0.8518791946328813	0.8134949962785838	0.4433569582105279	0.7295578122564672	0.9238329818796861	1.0679636819098703	0.8879119004403143	1.0449987106037806	1.0	8.322324079692287	-8.406560553718835	4.338072149986832	0.9914314768660487	0.7645021060935472	0.3492681997994479	0.14495154465181556	0.2908485571793322	8.996467600397692	0.05747453498656096	0.049840670701929345	3.921384666189233e-09	8.406560553718835	-0.22692937077250153	
S(ph)PEEY(ph)GITVISQPLNLT(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	SPEEYGITVISQPLNLTK	18	0	F6TT59;P78363	F6TT59	ABCA4	Retinal-specific ATP-binding cassette transporter	3	S(0.678)PEEY(0.805)GIT(0.468)VIS(0.056)QPLNLT(0.992)K	43.494	0.033431999999999996	0.0	491.9	572.53	791.15	309.15	248.26	390.29	262.7	369.95	389.27	379.07	True	False	470.27666498442954	667.1308511539471	625.0984267044498	282.0472994863395	280.9105414836809	465.70801881269233	321.6171622008268	356.93864881034375	371.1729226653821	310.41674973659764	1.5149848240582382	2.1491457910052767	2.013739359215872	0.9086085068723551	0.9049464686491497	1.5002670416717725	1.0360818560007898	1.149869164963624	1.195724531554237	1.0	8.27806259559217	-7.256781922110113	24.999815954461877	1.1115690451402676	1.9182756195103816	0.7303727895599224	0.22061844285170945	198.12138996400114	1063451.9276877749	0.06050116690243089	0.10052797726623634	5.536280398179884e-08	7.256781922110113	0.8067065743701141	
S(ph)PESCSKPEK	ddPTM_K562_Methotrexat_30min_R1	1	SPESCSKPEK	10	1	Q03111	Q03111	MLLT1	Protein ENL	1	S(0.999)PES(0.001)CSKPEK	99.539	0.016954	5782300.0	1459.9	1330.8	3053.9	1898.0	994.83	1130.0	896.38	1239.0	1310.6	2126.7	True	False	1395.7245440349018	1550.6920802677112	2412.9281240127902	1731.6052868351048	1125.667582309718	1348.3565073620687	1097.4160329409103	1195.4236677281153	1249.6704920627067	1741.5340218556526	0.8014339809151237	0.8904173336880356	1.3855187976412593	0.9942988566999292	0.6463655422076039	0.7742349505899159	0.6301433214446096	0.6864199336481285	0.7175688079473453	1.0	10.766142941728551	-7.695564321903653	6.398185920280781	0.7231068542000649	1.038898491801359	0.3778814593134098	0.1716976140088599	0.20557627249261903	15.28899117851923	0.05193085512015144	0.06683236706435683	2.0157454032429575e-08	7.695564321903653	0.31579163760129414	
S(ph)PFEGAVTESQSLFSDNFR	ddPTM_K562_Methotrexat_30min_R1	1	SPFEGAVTESQSLFSDNFR	19	0	O95628-3;O95628-2;O95628;O95628-8;O95628-4;O95628-7;O95628-9;O95628-10;O95628-6;O95628-5	O95628-3	CNOT4	CCR4-NOT transcription complex subunit 4	1	S(1)PFEGAVTESQSLFSDNFR	97.77600000000001	0.00082459	6069400.0	219.29	264.99	187.98	189.32	291.73	337.71	336.02	229.7	257.09	243.55	True	False	209.65027417043197	308.77509344014186	148.5255668986949	172.72260953826233	330.09760842275983	402.96767796570276	411.38103860952344	221.62132080480055	245.13794201465092	199.44073495224734	1.051190842335339	1.5482047512213228	0.7447102866636387	0.8660347625554919	1.655116285556188	2.0204883323468823	2.0626730978905665	1.1112139195529136	1.2291267482209438	1.0	7.639816294152841	-7.769585586564326	24.978110700590403	1.5715115837418447	1.0659526286445764	0.24774416319463854	0.38490068961751134	252.9671768621038	775652.45337599	0.12715985822116113	0.14664840212711683	1.699864927660149e-08	7.769585586564326	-0.5055589550972683	
S(ph)PGAPGPLTLK	ddPTM_K562_Methotrexat_30min_R1	4	SPGAPGPLTLK	11	0	Q15942-2;Q15942;H0Y2Y8;C9JJK5	Q15942-2	ZYX	Zyxin	1	S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK	111.79	0.0022024	96051000.0	12455.900000000001	10115.199999999999	19324.300000000003	11990.2	9673.8	8756.099999999999	8062.6	12165.0	13178.2	14917.3	True	False	11908.353550273545	11786.564870997861	15268.39351218454	10939.037781986442	10946.074261680636	10448.092401869922	9870.843288771935	11737.150054812357	12565.548358386053	12215.632418407544	0.9748454392200796	0.9648755354849146	1.249906103033752	0.8954950024120387	0.8960710249586562	0.8553050750058472	0.8080501238640513	0.9608303240302017	1.0286449303640823	1.0	13.576440935195734														
S(ph)PGASNFSTLPK	ddPTM_K562_Methotrexat_30min_R1	4	SPGASNFSTLPK	12	0	Q9Y4E8	Q9Y4E8	USP15	Ubiquitin carboxyl-terminal hydrolase 15	1	S(1)PGASNFSTLPK;S(1)PGASNFSTLPK;S(1)PGASNFSTLPK;S(1)PGASNFSTLPK	184.76	4.815600000000001e-09	149077000.0	7643.099999999999	5308.599999999999	10132.7	7096.9	5868.700000000001	5108.7	4543.18	7485.7	6906.1	8595.5	True	False	7307.118475589533	6185.75591922841	8005.984741538488	6474.725795648075	6640.536916157579	6095.883972708496	5562.103764627155	7222.423688064849	6585.0369183841485	7038.77165790204	1.0381240976024892	0.8788118467068048	1.1374121978442946	0.9198658672751884	0.943422693461382	0.8660437174240457	0.7902094335426961	1.0260914885563355	0.9355377952901046	1.0	12.781107969537215	-6.229789494728093	22.46756806011838	0.9429759603095061	1.0381247532704556	0.08829740024474231	0.09051419955980713	8764.185025570294	6221099.705879478	0.0229839433495029	2.447816776274887	5.891291407683958e-07	6.229789494728093	0.09514879296094947	
S(ph)PGEPGGAAPEREVPAAAR	ddPTM_K562_Methotrexat_30min_R1	2	SPGEPGGAAPEREVPAAAR	19	1	Q96EB6;Q96EB6-2	Q96EB6	SIRT1	NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment	1	S(1)PGEPGGAAPEREVPAAAR;S(1)PGEPGGAAPEREVPAAAR	175.39	9.5947e-12	29251000.0	2746.41	2349.04	3256.0299999999997	3388.51	2169.83	2530.64	2852.56	3191.14	2715.64	3433.06	True	False	2625.6811048584805	2737.1789331470295	2572.633799282675	3091.4445893011675	2455.2006776264247	3019.650364416589	3492.3191937860347	3078.9057974446296	2589.3904891386915	2811.2995669684346	0.9339741433851833	0.9736347436280748	0.915104825366183	1.099649651579048	0.8733329974770319	1.0741119160320682	1.2422437063695697	1.095189510794386	0.9210653035923031	1.0	11.457021477531036	-8.400318458426348	8.932483734062327	1.084589255516988	0.9654809048343549	0.23346977026664373	0.09431898807814569	0.4587779409160101	31.462790575454576	0.03359159214498421	0.029591549035119735	3.978153544770554e-09	8.400318458426348	-0.11910835068263315	
S(ph)PGKAEAESDALPDDTVIESEALPSDIAAEAR	ddPTM_K562_Methotrexat_30min_R1	2	SPGKAEAESDALPDDTVIESEALPSDIAAEAR	32	1	A0A1W2PRR2;F5GYL3;G3V529;Q9GZR7-2;Q9GZR7	A0A1W2PRR2	DDX24	ATP-dependent RNA helicase DDX24	1	S(0.815)PGKAEAES(0.185)DALPDDTVIESEALPSDIAAEAR;S(0.94)PGKAEAES(0.059)DALPDDT(0.001)VIESEALPSDIAAEAR	94.929	1.0176e-07	52843000.0	3682.82	2268.9300000000003	5764.9	3406.31	3198.56	2732.36	2673.33	3669.1000000000004	3444.98	4572.7	True	False	3520.9276424841537	2643.832117284204	4554.926272019825	3107.6840909374528	3619.22670413294	3260.3498995184286	3272.892303868809	3540.055673334321	3284.8236317306446	3744.539719631044	0.9402831605778978	0.7060499594713086	1.2164182017192302	0.8299241892521995	0.9665344675498725	0.8706944360680133	0.8740439543771998	0.9453914067930167	0.8772302813373025	1.0	11.870572677574062														
S(ph)PGLCSDSLEK	ddPTM_K562_Methotrexat_30min_R1	1	SPGLCSDSLEK	11	0	Q5VUA4;Q5VUA4-2	Q5VUA4	ZNF318	Zinc finger protein 318	1	S(1)PGLCSDSLEK	101.72	0.016259	0.0	401.3	440.91	632.93	369.03	548.5	327.74	256.75	424.54	394.96	530.21	True	False	383.6593325030524	513.7628833114189	500.0866425002178	336.6777128560369	620.6373640691177	391.0711165688891	314.3327232396738	409.6086875684376	376.5983958073299	434.18383116005344	0.8836333943573864	1.183284236860562	1.1517855033064799	0.775426648100876	1.4294345379257842	0.9007040071575774	0.7239622958778517	0.9433992198052241	0.867370843361747	1.0	8.762162191316126	-8.491997117129925	24.99498666728298	0.869447216803914	1.085566401911248	0.23679242820562685	0.17686880661926607	912.6884717234922	738713.9022090526	0.059769642411669044	0.05264870972410959	3.22109017298188e-09	8.491997117129925	0.21611918510733408	
S(ph)PGMLEPLGSSR	ddPTM_K562_Methotrexat_30min_R1	2	SPGMLEPLGSSR	12	0	Q9UQ35	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR	136.01	8.057699999999999e-06	65709000.0	682.48	661.13	775.05	761.75	865.73	729.1600000000001	670.62	849.26	875.56	951.46	True	False	652.4789963784781	770.3704952114462	612.3775966849316	694.9685601931718	979.5886694540693	870.0598503611739	821.0236060720155	819.3910444348493	834.8554067071751	779.1413741640948	0.8374333824570579	0.9887428915425541	0.7859646746932463	0.8919672131887127	1.2572669119324142	1.1166906022602399	1.0537543420189361	1.0516590077300625	1.0715069618820503	1.0	9.605741316906615	-7.644644376400357	9.317469780115694	1.0935226135063336	0.8754787998783341	0.6427241489961953	0.07889272690892347	0.17897310085579568	13.802097511849578	0.023425983107292797	0.030244941027937348	2.266499479188674e-08	7.644644376400357	-0.21804381362799952	
S(ph)PGPGPGPGAGAEPGATGGSSHFISSR	ddPTM_K562_Methotrexat_30min_R1	2	SPGPGPGPGAGAEPGATGGSSHFISSR	27	0	Q9ULI0-2;Q9ULI0;C9JG15	Q9ULI0-2	ATAD2B	ATPase family AAA domain-containing protein 2B	1	S(1)PGPGPGPGAGAEPGATGGSSHFISSR;S(1)PGPGPGPGAGAEPGATGGSSHFISSR	170.33	4.022799999999999e-68	0.0	617.53	700.38	646.62	624.5799999999999	764.28	502.954	368.89	732.3499999999999	618.9100000000001	577.04	True	False	590.3841206095442	816.1058905755177	510.9032985851371	569.8240411230079	864.7962162456608	600.1427423042322	451.622972836936	706.5928354000682	590.137009188563	472.5324643680752	1.2494043587017325	1.7270895697439719	1.0812025355091228	1.2058939524611123	1.8301307983191502	1.270056107376267	0.9557501481742599	1.4953318315282433	1.2488814074981327	1.0	8.884269639899756	-15.231128830495566	0.1555573692938744	1.68557346413876e-07	1.455364115206779	0.1520304431571009	0.2559404317400363	201.98919383047976	2.281483529600177	63.67698118617595	1.2381108994136343	5.873151036669873e-16	15.231128830495566	1.4553639466494326	
S(ph)PGSNSKVPEIEVTVEGPNNNNPQTSAVR	ddPTM_K562_Methotrexat_30min_R1	2	SPGSNSKVPEIEVTVEGPNNNNPQTSAVR	29	1	A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347	A0A494C1K3	GTF2I	General transcription factor II-I	1	S(0.44)PGS(0.44)NS(0.119)KVPEIEVT(0.002)VEGPNNNNPQTSAVR;S(0.323)PGS(0.323)NS(0.323)KVPEIEVT(0.03)VEGPNNNNPQTSAVR	81.682	0.0001374	224349000.0	2123.29	1547.01	2736.5	2147.6400000000003	1334.5900000000001	1434.94	1535.47	1818.1	1901.1100000000001	2520.77	True	False	2029.9527139556583	1802.6271078260825	2162.14604648515	1959.359735626208	1510.1119775989134	1712.2218466142724	1879.8382338960937	1754.1563924911102	1812.7278110524453	2064.2341262392783	0.9833926724455062	0.873266789320161	1.0474325654252468	0.9491945272680209	0.7315604167198362	0.8294707585973695	0.9106710377474836	0.8497855791614671	0.8781599858321113	1.0	11.011390895737433	-7.553206182023903	24.979633227733487	0.8577102172879599	0.9651809338213078	0.28479614090752303	0.07469181426835243	234.20261864442446	192903.01850484265	0.02158469064588679	0.027866047920479628	2.797652814001518e-08	7.553206182023903	0.10747071653334783	
S(ph)PGSTPTTPTSSQAPQK	ddPTM_K562_Methotrexat_30min_R1	4	SPGSTPTTPTSSQAPQK	17	0	A0A494C1F2;P35658-2;P35658-4;P35658;P35658-3;P35658-5	A0A494C1F2	NUP214	Nuclear pore complex protein Nup214	1	S(1)PGSTPTTPTSSQAPQK;S(0.982)PGS(0.017)T(0.001)PTTPTSSQAPQK;S(0.994)PGS(0.002)T(0.004)PTTPTSSQAPQK;S(0.916)PGS(0.079)T(0.005)PTTPTSSQAPQK	248.06	5.2144999999999995e-79	96312000.0	8172.700000000001	5867.799999999999	11713.2	7376.2	5727.6	5512.0	4946.12	7538.0	7426.400000000001	8096.2	True	False	7813.43789371467	6837.35421445362	9254.759390348934	6729.539998289299	6480.879792966777	6577.115989893563	6055.413316729172	7272.884267420926	7081.148284949248	6629.899726217958	1.1785152440264528	1.0312907429678435	1.3959124228909467	1.0150289259545378	0.9775230487028512	0.9920385317268583	0.913349155611362	1.096982543892826	1.0680626521313477	1.0	12.694771335153485	-7.470956624985465	24.999504420930272	1.0063084555529145	1.188282417926481	0.46416759711311484	0.09465771610425419	313.49640409429105	150942.17071091445	0.026326975924199726	0.039048801072315995	3.3809860200333554e-08	7.470956624985465	0.18197396237356656	
S(ph)PHQLLSPSSFSPSATPSQK	ddPTM_K562_Methotrexat_30min_R1	1	SPHQLLSPSSFSPSATPSQK	20	0	E9PIQ6;A0A3B3ITS5;Q14181	E9PIQ6	POLA2	DNA polymerase alpha subunit B	1	S(0.999)PHQLLS(0.001)PSSFSPSATPSQK	91.50299999999999	0.00092904	15385000.0	3959.7	3423.9	5643.2	4012.5	3366.4	2812.1	2825.2	4128.5	4010.5	5045.3	True	False	3785.636329210905	3989.641278650898	4458.769438890917	3660.7303548081427	3809.140606020561	3355.498525975995	3458.823017319287	3983.298314943922	3824.0527303658537	4131.547280043414	0.9162756886497802	0.9656530612446423	1.0792008747977015	0.886043437646362	0.921964665494651	0.8121651039028497	0.8371737711986058	0.964117809854052	0.9255739971407688	1.0	12.012466462238933	-5.850228528764065	12.595456530084833	0.9281844389597589	0.00028133591087494087	0.001335692484382478	0.07363649610993371	715922.5252779159	440538.43440377765	0.019797013556317713	18880279.85777076	1.411794453111403e-06	5.850228528764065	-0.9279031030488839	
S(ph)PILEEKDIPPLEFPK	ddPTM_K562_Methotrexat_30min_R1	1	SPILEEKDIPPLEFPK	16	1	F5GXF5;E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-4;Q12830-2;Q12830;A0A0A0MR81	F5GXF5	BPTF	Nucleosome-remodeling factor subunit BPTF	1	S(1)PILEEKDIPPLEFPK	70.942	0.028852	4641800.0	2133.2	1464.3	3932.1	2570.4	1501.6	1327.6	1174.8	2003.5	2175.7	3468.1	True	False	2039.427082221558	1706.2506861557033	3106.8059453258743	2345.0570228034508	1699.086719938354	1584.1399107733473	1438.2788053046502	1933.0357694053905	2074.5521818867933	2839.9934834238916	0.7181097752952686	0.600793873688277	1.0939482655362696	0.8257261984898127	0.5982713445841917	0.5577970231338386	0.5064373611064289	0.6806479594716977	0.7304777965144189	1.0	11.471671904024854	-5.525109030757414	24.699071585383315	0.7166736338741948	0.7455886120560978	0.0	0.18245032054481836	0.0	0.0	0.04368694560426595	0.0	2.9846332249319285e-06	5.525109030757414	0.028914978181903028	
S(ph)PISPELHSAPLTPVAR	ddPTM_K562_Methotrexat_30min_R1	1	SPISPELHSAPLTPVAR	17	0	A0A3B3IT55;A0A0G2JNT7;Q7Z3B3-4;Q7Z3B3-2;Q7Z3B3;A0A1W2PRB5;A0A0J9YVS1;A0A0G2JNB1;A0A0G2JQF4;A0A0G2JQF5	A0A3B3IT55	KANSL1	KAT8 regulatory NSL complex subunit 1	1	S(0.988)PIS(0.012)PELHSAPLTPVAR	112.12	0.0006592000000000001	11113000.0	532.76	449.35	710.35	720.79	519.39	545.93	577.93	606.68	596.81	663.56	True	False	509.34050830881165	523.5974498559482	561.2572425071173	657.5994597986693	587.6988888311014	651.4232460744907	707.5455140872626	585.3427205305028	569.0644333648288	543.3828539721342	0.937351086044632	0.963588464428801	1.0328946495170417	1.2101954542577311	1.0815558211581697	1.1988292256786908	1.3021123300359916	1.0772197102864796	1.04726240293554	1.0	9.085825232920849	-6.99783163554165	3.3759020864165894	1.142041135430043	0.9523074537815104	0.4226917001398981	0.0845219825305954	0.21544172931295266	5.173428129379349	0.023813695608372203	0.0512467956013427	1.0050053286918969e-07	6.99783163554165	-0.18973368164853266	
S(ph)PISVPGGSALISNLGK	ddPTM_K562_Methotrexat_30min_R1	1	SPISVPGGSALISNLGK	17	0	P51610-2;P51610;A6NEM2;P51610-4	P51610-2	HCFC1	Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6	1	S(0.997)PIS(0.003)VPGGSALISNLGK	120.77	0.00025883	4064000.0	1215.9	715.02	1405.4	1200.6	933.05	622.27	719.86	1282.0	1289.0	1819.9	True	False	1162.450491877551	833.1649017380661	1110.4257459273638	1095.3452620517526	1055.7624294342577	742.5148706514995	881.3069295085162	1236.911333355483	1229.074671348108	1490.2984748084366	0.7800118644199597	0.5590590850233282	0.7451029204536348	0.7349838173809771	0.7084234784377443	0.49823232272108614	0.5913626997583821	0.8299755748689711	0.8247171235319781	1.0	10.541385585149724	-9.779207425189272	1.6405647063255475	0.9803442251974084	0.6605116142348015	0.5715000628261422	0.09191567094365673	0.25926183953390836	1.3985549721511177	0.08921373474334095	0.02670868410344504	1.662618370647894e-10	9.779207425189272	-0.31983261096260684	
S(ph)PLAQMEEERR	ddPTM_K562_Methotrexat_30min_R1	1	SPLAQMEEERR	11	1	G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181;A0A0U1RRM2	G3V1Q4	SEPT7	Septin-7	1	S(1)PLAQMEEERR	51.00899999999999	0.033937	16706000.0	802.62	658.83	681.72	793.62	606.32	800.58	624.79	871.28	600.15	814.62	True	False	767.3377858300523	767.6904593047617	538.6362882550183	724.0445667745389	686.061707533979	955.2807545698452	764.9150619393018	840.6365885537946	572.2491574938455	667.0844241708052	1.1502858679152395	1.1508145468379227	0.8074484559050383	1.0853867074988837	1.0284480984348612	1.4320237738383292	1.146654057902943	1.2601652176165214	0.8578361849853694	1.0	9.381725545824786														
S(ph)PLGEAPPGTPPCR	ddPTM_K562_Methotrexat_30min_R1	1	SPLGEAPPGTPPCR	14	0	M0QXZ5;Q96B54	M0QXZ5	ZNF428	Zinc finger protein 428	1	S(0.505)PLGEAPPGT(0.495)PPCR	112.71	0.0016614999999999998	20040000.0	1621.2	1487.9	1624.8	1812.6	1522.2	1406.0	1360.4	1529.2	1835.5	2009.5	True	False	1549.9339891700681	1733.750185024291	1283.776684205764	1653.69217224305	1722.395981013693	1677.6896011956355	1665.5043298744006	1475.4171692411883	1750.1680056318469	1645.5600775468733	0.9418884246879882	1.0535927607145694	0.7801457398745115	1.0049418400501668	1.046692858264624	1.0195249775970863	1.012120039006573	0.8966048638228229	1.0635698018640063	1.0	10.6843629832585														
S(ph)PLTGYVR	ddPTM_K562_Methotrexat_30min_R1	2	SPLTGYVR	8	0	H0YNS8;H0YKM5;Q9NP66	H0YNS8	HMG20A	High mobility group protein 20A	1	S(0.996)PLT(0.004)GYVR;S(0.998)PLT(0.002)GYVR	106.18	0.013143	44662000.0	727.02	655.9300000000001	1167.27	931.79	936.95	721.8499999999999	955.96	1000.81	1321.6399999999999	1119.79	True	False	695.0610713091683	764.3112835963334	922.275978688369	850.1014173973036	1060.1753477931804	861.3372963179727	1170.3583645888941	965.6109450354924	1260.197244872392	916.9851800130447	0.7579850650359263	0.8335045104932455	1.0057697755543324	0.9270612392941949	1.1561531973484007	0.9393143041916115	1.27631110087542	1.053027863571095	1.374283109847495	1.0	9.84075460746151	-6.672093314840068	0.514485601934427	1.1697157284214994	0.5819151797501283	0.5287198676143967	0.1244249083485499	2.2098236059834373	0.6060289074341816	0.07594500202979165	0.7462095756169012	2.127681831742624e-07	6.672093314840068	-0.5878005486713711	
S(ph)PPAVPSPPSSTDHSSHFSNFNDNSR	ddPTM_K562_Methotrexat_30min_R1	1	SPPAVPSPPSSTDHSSHFSNFNDNSR	26	0	J3QS41;P42694	J3QS41	HELZ	Probable helicase with zinc finger domain	1	S(0.594)PPAVPS(0.168)PPS(0.218)S(0.011)T(0.011)DHSSHFSNFNDNSR	90.435	0.00010136	0.0	490.91	308.14	591.75	419.87	501.12	342.47	267.36	442.19	502.23	617.81	True	False	469.3301841990371	359.05489751554893	467.5497617422208	383.060648990229	567.0260635958361	408.6474805984851	327.322285824184	426.63792706432196	478.8814369209929	505.91862229869776	0.9276792027670043	0.7097087983916127	0.9241600153357793	0.7571586261240003	1.1207851195899647	0.8077336207585118	0.6469860396459783	0.843293581734242	0.9465582325179919	1.0	8.982761533888313	-9.876349243971111	3.6622478514741905	0.9961734719149181	0.8392391559237704	0.15560068398874394	0.12486426894382588	0.4079729783930765	9.727270052870589	0.12028543026822433	0.03208312349302561	1.3293849445560964e-10	9.876349243971111	-0.1569343159911477	
S(ph)PPEFQ	ddPTM_K562_Methotrexat_30min_R1	1	SPPEFQ	6	0	Q96GX2	Q96GX2	ATXN7L3B	Putative ataxin-7-like protein 3B	1	S(1)PPEFQ	77.923	0.021799000000000002	14840000.0	1752.2	1661.8	2109.9	1657.0	1584.3	1356.9	1323.2	1858.3	2034.6	1996.6	True	False	1675.1753860250408	1936.3842042296978	1667.0608234895005	1511.7333826584654	1792.663219498091	1619.1017210969835	1619.9612829239973	1792.942535705533	1940.0118900891068	1634.9963925504298	1.0245743621561976	1.1843354597309743	1.0196113160158435	0.9246096135419073	1.0964325228275988	0.9902784669581733	0.9908041940062147	1.0966033588054118	1.1865542327361858	1.0	10.675071737232328	-12.099234105395361	4.930938750041917	0.9999980383506928	1.0542378091831413	0.042143580834339556	0.08062584727676485	1.7898835030800313e-06	3.2683726003676414e-07	0.08034896506186069	0.01948678170429185	7.957302982855447e-13	12.099234105395361	0.054239770832448464	
S(ph)PPETAAPVEDMAR	ddPTM_K562_Methotrexat_30min_R1	2	SPPETAAPVEDMAR	14	0	Q9Y3L3;A0A2R8Y5V0;Q6ZT62-2;Q6ZT62;A0A3B3IU28	Q9Y3L3	SH3BP1	SH3 domain-binding protein 1	1	S(1)PPETAAPVEDMAR;S(1)PPETAAPVEDMAR	93.71600000000001	0.008005700000000001	36477000.0	1224.33	1013.89	1528.3400000000001	1132.6999999999998	1105.96	980.97	1192.97	1185.29	1392.73	1285.12	True	False	1170.5099191713489	1181.4180893166742	1207.5623200018697	1033.3979496302015	1251.4131251884794	1170.528569050415	1460.5238903339196	1143.602678871233	1327.982286289099	1052.3723149325886	1.1122583733555627	1.1226236879790514	1.1474668260151086	0.9819699121374146	1.1891353539347342	1.1122760951055568	1.3878395218212063	1.0866901976079524	1.2618939774885327	1.0	10.039429485375802	-7.890134877985868	18.19567041053006	1.185094376466368	1.0958461198189426	0.11807870234600937	0.10625099916239898	3.111857606591323	499.1410791698648	0.031398782504557514	0.03560319221794327	1.2878495246763262e-08	7.890134877985868	-0.0892482566474253	
S(ph)PPLPAVIR	ddPTM_K562_Methotrexat_30min_R1	3	SPPLPAVIR	9	0	Q9Y6X9-2;Q9Y6X9	Q9Y6X9-2	MORC2	MORC family CW-type zinc finger protein 2	1	S(1)PPLPAVIR;S(1)PPLPAVIR;S(1)PPLPAVIR	107.21	0.005632	125343000.0	1049.02	1081.33	1185.43	1131.28	997.27	970.9300000000001	881.98	1332.2800000000002	1257.8899999999999	1178.79	True	False	1002.9063368610815	1260.0014030326759	936.6244428594529	1032.1024388255096	1128.4284850778647	1158.5484811442961	1079.7864663794649	1285.422957256507	1199.4109684577734	965.2997082913553	1.0389584998800967	1.3052955390020393	0.9702939251036763	1.0692041341775598	1.1689928789839357	1.2001956192393386	1.1186022922256538	1.3316309392984187	1.2425270184539998	1.0	9.91483313270921	-7.918544886243735	5.234763639341235	1.1945308652433149	1.102389705376779	0.10045222444258572	0.11337448866715891	0.4504858556824567	21.30424039001332	0.03531774038730208	0.0401690063911723	1.20629940540777e-08	7.918544886243735	-0.09214115986653582	
S(ph)PPRASYVAPLTAQPATYR	ddPTM_K562_Methotrexat_30min_R1	4	SPPRASYVAPLTAQPATYR	19	1	Q96PK6	Q96PK6	RBM14	RNA-binding protein 14	1	S(0.934)PPRAS(0.055)YVAPLT(0.011)AQPATYR;S(0.958)PPRAS(0.041)Y(0.001)VAPLTAQPATYR;S(0.843)PPRAS(0.146)Y(0.011)VAPLTAQPATYR;S(0.999)PPRAS(0.001)YVAPLTAQPATYR	113.65	0.00026728	340497000.0	1576.62	1518.84	2138.4100000000003	1801.56	1697.2800000000002	1586.66	1589.22	1684.4700000000003	1712.47	2066.49	True	False	1507.3136725914835	1769.802494134212	1689.5869641017032	1643.6200319023449	1920.5020698035214	1893.259589354957	1945.6430396376015	1625.226235333315	1632.857643478272	1692.2286363024825	0.8907269622176835	1.045841239279125	0.9984389389565281	0.9712753918960103	1.1348951486838186	1.1187965672840325	1.1497518703434952	0.9604058225160592	0.9649155016346159	1.0	10.724708788211936	-6.2606750273631375	23.426273373741857	1.0427039162879717	0.890726868704964	0.29024188995329625	0.06889664962123129	37.00199588427501	1133508.0923801744	0.01869166119871879	0.10862856229248792	5.486873815787288e-07	6.2606750273631375	-0.15197704758300767	
S(ph)PPREGSQGELTPANSQS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SPPREGSQGELTPANSQSR	19	1	C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0	C9JFE4	GPS1	COP9 signalosome complex subunit 1	2	S(0.799)PPREGS(0.201)QGELT(0.012)PANS(0.161)QS(0.827)R	68.771	0.033472	0.0	2301.1	2205.7	2600.7	2185.6	2329.8	2181.9	2158.7	2373.5	2211.2	2623.4	True	False	2199.946399259342	2570.154434510438	2054.8486106683463	1993.99184136291	2636.2095365692435	2603.5212950560167	2642.8434261245716	2290.022659687392	2108.401794635327	2148.2768387342458	1.024051630401387	1.1963795299421283	0.9565101543798485	0.9281819760891525	1.2271274767932077	1.2119114483354942	1.2302154817633848	1.0659811707678524	0.9814385914422403	1.0	11.068964203559842	-5.9944684941275606	16.805949185977116	1.0951059855930703	0.936053811321136	0.025426376734147715	0.11378497541749567	6826749.382357758	194159524.3800104	0.03031082638957232	23031183.64771337	1.0128182209989315e-06	5.9944684941275606	-0.1590521742719343	
S(ph)PPSSSEIFTPAHEENVR	ddPTM_K562_Methotrexat_30min_R1	2	SPPSSSEIFTPAHEENVR	18	0	I3L3A7;I3L2L5;I3L317;I3L4Q0;C9JLW8	I3L3A7	FAM195B	Protein FAM195B	1	S(0.979)PPS(0.013)S(0.008)SEIFTPAHEENVR;S(1)PPSSSEIFTPAHEENVR	175.26	1.3335999999999999e-11	84086000.0	1022.52	993.8600000000001	1164.06	1137.15	1065.42	993.95	994.65	1288.65	1178.13	981.4	True	False	977.571245130877	1158.078472268461	919.7397138211234	1037.4578250392717	1205.5414046062344	1186.0167703473705	1217.7255819682234	1243.3274490862268	1123.3589934486774	803.658950039563	1.2164006200425597	1.4410073728556752	1.1444403297889556	1.2909180255980464	1.5000659229227613	1.4757712463588997	1.5152268034945378	1.5470834351126426	1.3978056156699008	1.0	9.65043958238062	-7.701670152178252	7.648070014862424	1.4421398198217168	1.2748574865505031	0.11475256140341894	0.16325198669571278	0.3898340707546825	42.674846356675154	0.045490503747865146	0.05858531037128069	1.9876039347433355e-08	7.701670152178252	-0.16728233327121367	
S(ph)PQLSDFGLER	ddPTM_K562_Methotrexat_30min_R1	4	SPQLSDFGLER	11	0	Q8IX90-3;Q8IX90	Q8IX90-3	SKA3	Spindle and kinetochore-associated protein 3	1	S(1)PQLSDFGLER;S(1)PQLSDFGLER;S(1)PQLSDFGLER;S(1)PQLSDFGLER	168.0	8.4471e-08	159030000.0	3587.1499999999996	3499.31	3782.21	3609.95	3143.41	2633.8900000000003	2778.05	3747.1	3866.51	4085.33	True	False	3429.4631811321324	4077.5114994000655	2988.3758079578315	3293.471288308949	3556.8235124676494	3142.851965642374	3401.098429585104	3615.3123691235032	3686.7567940373724	3345.437149342905	1.0251166074979863	1.218827709915564	0.8932691527457912	0.9844666455490989	1.0631864697163012	0.9394443312915559	1.0166379691972787	1.0806696427800493	1.1020254243190633	1.0	11.707979025269394	-11.963759447802527	9.059817229434977	0.9999992595526186	1.0343362876539324	0.01529761843857047	0.08566659268870186	0.0	0.0	0.08387004262985023	0.020341473211054624	1.0870275526606952e-12	11.963759447802527	0.03433702810131378	
S(ph)PRMMKT(ph)IT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SPRMMKTITR	10	2	Q8WVX9	Q8WVX9	FAR1	Fatty acyl-CoA reductase 1	3	S(1)PRMMKT(1)IT(1)R	55.31399999999999	0.032075	4879300.0	3224.1	2916.2	4983.0	3912.0	3299.4	3571.7	3104.9	3566.4	3650.3	3482.7	True	False	3082.372424428338	3398.052483075368	3937.136396724103	3569.0410337718254	3733.328931649308	4261.88047552664	3801.252862266262	3440.967690545236	3480.598349745537	2851.949281946998	1.0807949650226714	1.1914841910356662	1.3805071575593584	1.2514391670160683	1.3090446437043932	1.4943745677753062	1.33286131220089	1.2065318665821858	1.2204278567567535	1.0	11.477732610295863	-10.190083702050815	1.4343681711820193	1.0019416930311233	1.2937138064142015	0.3908673247366524	0.10595947305040312	0.782541652004791	3.116146373058213	0.10869330687023483	0.032081797951111456	6.455298033791823e-11	10.190083702050815	0.2917721133830782	
S(ph)PRPDHPGTPPHK	ddPTM_K562_Methotrexat_30min_R1	1	SPRPDHPGTPPHK	13	1	P30291	P30291	WEE1	Wee1-like protein kinase	1	S(1)PRPDHPGTPPHK	84.859	0.023097	1649400.0	1577.4	934.26	2133.7	1593.2	1276.0	1205.9	819.05	1007.4	1456.8	1677.5	True	False	1508.0593847254304	1088.630585295245	1685.8655287357453	1453.5266296025752	1443.8163656375457	1438.9231081662995	1002.7428119550339	971.9691710002445	1389.073685973563	1373.6884946926505	1.097817584228107	0.7924872265446291	1.227254603390226	1.0581195338087095	1.0510507813203935	1.0474886509755945	0.7299637551229458	0.7075615576278909	1.0111999127461242	1.0	10.423839172287302	-8.742087547557023	24.915258527913863	0.8378114512761053	1.043253120909264	0.2977224418265839	0.13600808076842283	260.76769272770997	335735.4408815606	0.05127898954523315	0.0396588648053747	1.810974989160637e-09	8.742087547557023	0.20544166963315857	
S(ph)PRPTGSDLLPGAPILSLR	ddPTM_K562_Methotrexat_30min_R1	1	SPRPTGSDLLPGAPILSLR	19	1	Q8N1F8	Q8N1F8	STK11IP	Serine/threonine-protein kinase 11-interacting protein	1	S(0.95)PRPT(0.048)GS(0.002)DLLPGAPILSLR	97.62299999999999	0.00059221	4124100.0	866.38	485.81	754.95	832.69	661.22	682.49	519.32	844.23	722.55	1148.5	True	False	828.2949725741203	566.0818451419124	596.4963120021794	759.6893605346272	748.1820198172868	814.371533371273	635.7907296312655	814.537952385881	688.958808209911	940.4955208074571	0.8807006032979214	0.6018974387628194	0.6342362071964583	0.807754363234394	0.7955189612970611	0.8658962380512977	0.6760167545353231	0.8660731862779784	0.7325487394330271	1.0	9.87727726257768	-15.99999999841355	0.16815140548890659	1.9317747599723603	0.7012910945907366	0.3656815593071965	0.09423702540814208	141.07461752373328	1.3239444633170925	43.776181087626625	0.351489556240425	1.0000000036529363e-16	15.99999999841355	-1.2304836653816236	
S(ph)PS(ph)PAPAPAPAAAAGPPTR	ddPTM_K562_Methotrexat_30min_R1	2	SPSPAPAPAPAAAAGPPTR	19	0	Q9H7N4	Q9H7N4	SCAF1	Splicing factor, arginine/serine-rich 19	2	S(1)PS(1)PAPAPAPAAAAGPPTR;S(1)PS(1)PAPAPAPAAAAGPPTR	155.24	1.3338999999999998e-14	29397000.0	1688.9099999999999	1623.47	2511.3999999999996	2002.67	1887.0	1546.14	1537.26	1622.55	1872.91	2097.88	True	False	1614.6675386437341	1891.7208232282987	1984.29146031164	1827.0990304457632	2135.173575202234	1844.9096728254776	1882.0296869617168	1565.4839968299057	1785.8388228972724	1717.933603127163	0.9398893738992863	1.1011606151627689	1.155045489941884	1.0635446137847737	1.242873165363066	1.0739120938476199	1.09551945636074	0.9112598961800662	1.039527266738657	1.0	10.746458563111535	-9.176259100128112	8.186621307032903	0.9818002611927744	1.1023589506455096	0.304690716576575	0.07739828165221536	0.3638330457936665	31.73787609620705	0.03637130490513001	0.020939043431799788	6.664090708786019e-10	9.176259100128112	0.12055868945273518	
S(ph)PS(ph)PYYSR	ddPTM_K562_Methotrexat_30min_R1	2	SPSPYYSR	8	0	P62995;H7C2L4;P62995-3;H7BXF3;Q13595;Q13595-4;Q13595-3	P62995;Q13595	TRA2B;TRA2A	Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha	2	S(1)PS(1)PYYSR;S(1)PS(1)PYYSR	143.4	8.520399999999999e-07	150843000.0	8263.400000000001	6725.5	10723.900000000001	8693.7	7901.0	7566.0	6597.3	8478.6	8639.7	9115.4	True	False	7900.150830315785	7836.774561046354	8473.099940764518	7931.536818840014	8940.119988167911	9028.022420089746	8076.9124635992175	8180.402832283774	8238.042232774436	7464.512729968035	1.058361224115645	1.0498708816697153	1.1351176221787758	1.062565917664927	1.1976829984194017	1.2094590426304233	1.0820414882772669	1.095905805002064	1.1036275951008678	1.0	12.865832371545293	-6.754395161455296	24.94433024849308	1.1181020244844766	1.0541160206879197	0.12164837953435892	0.05834355416289219	292.658412904675	1036308.7929235088	0.015074841843048813	0.03809647125145951	1.760373566112068e-07	6.754395161455296	-0.06398600379655695	
S(ph)PSAEFSPAAPPGISSIHSPSLR	ddPTM_K562_Methotrexat_30min_R1	2	SPSAEFSPAAPPGISSIHSPSLR	23	0	G3V2D8;Q68DK2-5;Q68DK2-2;Q68DK2	G3V2D8	ZFYVE26	Zinc finger FYVE domain-containing protein 26	1	S(0.5)PS(0.5)AEFSPAAPPGISSIHSPSLR;S(0.5)PS(0.5)AEFSPAAPPGISSIHSPSLR	137.94	1.5289000000000002e-13	59544000.0	1064.69	1079.88	1242.8899999999999	1251.31	1123.15	819.89	816.6600000000001	1142.87	1133.97	1347.5700000000002	True	False	1017.8875024238097	1258.3118151784608	982.0243740968124	1141.6095950841063	1270.8639114935809	978.3221387797231	999.8167936160158	1102.6746143151179	1081.2519822099403	1103.5120147797159	0.9224072676970367	1.1402792161077162	0.889908184908023	1.0345239379310207	1.1516538963531557	0.8865532279456121	0.906031633752171	0.9992411496627291	0.9798280106862097	1.0	10.10788662208999	-8.299415874847693	24.999239128821667	0.9512646982435057	1.0267239874898355	0.16113800793711186	0.08360024877487414	1061.7098314775803	698901.0145220616	0.02911951612917034	0.025681582036058786	5.0186178292003374e-09	8.299415874847693	0.07545928924632983	
S(ph)PSAIPEQNHSLNDQAK	ddPTM_K562_Methotrexat_30min_R1	1	SPSAIPEQNHSLNDQAK	17	0	Q13129	Q13129	RLF	Zinc finger protein Rlf	1	S(0.869)PS(0.131)AIPEQNHSLNDQAK	144.72	8.5188e-10	32296000.0	1538.3	1020.5	2222.6	1480.1	1319.8	907.88	752.84	1313.3	1373.5	1703.6	True	False	1470.678173908412	1189.1202794658843	1756.106633626126	1350.3419310034972	1493.3768333608411	1083.3149609768805	921.683534036051	1267.1104946144744	1309.646284791796	1395.0615317784789	1.054203087396105	0.8523783735545681	1.2588022776223875	0.9679443524487615	1.0704738101817102	0.7765356124441538	0.6606759006974071	0.9082828719383528	0.9387731329113547	1.0	10.44611304086273	-8.256094191529918	24.798325848561205	0.8388600813887589	1.0383628232987778	0.33331568397342104	0.12877372695874	454.5516345685397	2108837.990076718	0.043358364446600954	0.042130526797170435	5.5450543655123754e-09	8.256094191529918	0.19950274191001893	
S(ph)PSDSSTASTPVAEQIER	ddPTM_K562_Methotrexat_30min_R1	2	SPSDSSTASTPVAEQIER	18	0	Q16643;Q16643-2;Q16643-3;D6R9Q9	Q16643	DBN1	Drebrin	1	S(1)PSDSSTASTPVAEQIER;S(0.978)PS(0.022)DSSTASTPVAEQIER	150.9	1.1193e-12	34440000.0	912.06	749.95	916.15	876.15	770.86	878.7	862.8799999999999	893.04	874.3199999999999	949.17	True	False	871.9669344698076	873.8664905295839	723.8626349305205	799.3392898106307	872.2416015794348	1048.4963389549118	1056.4028051764349	861.6312770201095	833.673054036522	777.2661153546479	1.1218383475676794	1.1242822416500937	0.9312931834166466	1.0283984777155908	1.1221917234632721	1.3489541332655521	1.3591262816010234	1.1085408973823176	1.0725709477971221	1.0	9.602264813597365	-8.003218054840755	13.032362586643002	1.2003558752978583	1.051453893384742	0.1934566822277004	0.11722587293914746	0.44839079492095757	1774.3528849700251	0.03925956790016384	0.04281262444236198	9.926175401156528e-09	8.003218054840755	-0.14890198191311632	
S(ph)PSGSAFGSQENLR	ddPTM_K562_Methotrexat_30min_R1	1	SPSGSAFGSQENLR	14	0	Q96N67-4;Q96N67-3;Q96N67-2;Q96N67-6;Q96N67-5;Q96N67;A0A1B0GWE0	Q96N67-4	DOCK7	Dedicator of cytokinesis protein 7	1	S(0.935)PS(0.022)GS(0.007)AFGS(0.036)QENLR	112.62	0.0016679000000000002	14497000.0	675.12	677.58	1071.4	956.14	626.17	904.42	692.85	749.52	759.43	690.76	True	False	645.4425331658625	789.5385781092543	846.527781547301	872.316690703117	708.5223304633719	1079.1863649454885	848.2392494512487	723.1589567680201	724.1242650596532	565.6566703987452	1.1410499812737545	1.3957911564141714	1.496539908122294	1.5421310069378298	1.2525660308467983	1.9078469704684005	1.4995655383208055	1.2784414904154628	1.2801480172578896	1.0	9.143782853782758	-9.936102806190124	1.5191815402939148	1.0130032800368396	1.4665295373197111	0.33808095436223284	0.19441991876601672	0.44516353000171527	2.3026995501135215	0.1887753495752122	0.05608884878085249	1.1585030828426645e-10	9.936102806190124	0.45352625728287155	
S(ph)PSPAVPLR	ddPTM_K562_Methotrexat_30min_R1	1	SPSPAVPLR	9	0	Q6P4R8-3;Q6P4R8;Q6P4R8-2;E9PQ59	Q6P4R8-3	NFRKB	Nuclear factor related to kappa-B-binding protein	1	S(0.986)PS(0.014)PAVPLR	98.04799999999999	0.0089257	27864000.0	2035.2	1775.4	2604.4	2032.5	1626.2	1899.7	2005.0	1909.0	2021.6	2020.8	True	False	1945.735044879672	2068.7546733598556	2057.772031231839	1854.3138806598258	1840.0738039183207	2266.7901389696663	2454.672288590248	1841.8593879684995	1927.6162572516162	1654.813538047634	1.1758031948271768	1.2501436722596515	1.2435068869811274	1.120557596384886	1.1119523508910005	1.3698160468544682	1.4833527960414776	1.113031375209526	1.1648540533006744	1.0	10.692452950099945	-9.982989170106006	1.86623041329494	1.0076108232676835	1.2422941704888333	0.29575079007487337	0.11160741555283092	0.4687011097825333	3.720078070447431	0.11490721256830021	0.032634912751548124	1.0399460983841587e-10	9.982989170106006	0.2346833472211498	
S(ph)PSPFTHTHLAQGYR	ddPTM_K562_Methotrexat_30min_R1	1	SPSPFTHTHLAQGYR	15	0	P38398-8;P38398-4;P38398;P38398-7;Q5YLB2	P38398-8	BRCA1	Breast cancer type 1 susceptibility protein	1	S(0.941)PS(0.058)PFTHTHLAQGYR	109.36	0.0010681	8660300.0	703.56	611.02	854.68	903.53	586.13	514.33	568.91	703.3	938.16	886.36	True	False	672.6323448189569	711.9806694358108	675.2943478932677	824.3189277208223	663.2163686450903	613.716993302242	696.5025494772452	678.5645403657651	894.5451463707833	725.8316149959923	0.9267057688340992	0.9809171366002596	0.9303732903629397	1.135688926591292	0.9137330958623954	0.8455363208526412	0.9595924661962968	0.9348787326789448	1.2324416956896023	1.0	9.503491087325767	-9.737560825565524	24.999685286616245	1.1162209461852757	0.954937248017911	0.35847129306296666	0.08709276520394749	214.12108872188054	224175.6893291415	0.05840207084499608	0.022048075112814994	1.8299497928401465e-10	9.737560825565524	-0.16128369816736465	
S(ph)PSPGLFR	ddPTM_K562_Methotrexat_30min_R1	5	SPSPGLFR	8	0	E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4	E7ESG2	CLSPN	Claspin	1	S(0.969)PS(0.031)PGLFR;S(0.79)PS(0.21)PGLFR;S(0.972)PS(0.028)PGLFR;S(0.996)PS(0.004)PGLFR;S(0.936)PS(0.064)PGLFR	126.24	0.0016457999999999998	739766000.0	20075.5	19712.3	24825.199999999997	23147.7	18988.3	18713.1	18549.2	20969.399999999998	20646.1	22187.5	True	False	19193.005057724953	22969.42252318996	19614.729776430886	21118.377080122722	21485.59427557633	22329.141732670018	22709.33028205397	20231.894316430924	19686.267317393445	18169.128748729167	1.0563525264835498	1.2642005481301106	1.0795635854472565	1.1623219457674787	1.1825329971905854	1.2289605099656649	1.2498854841150469	1.1135313418837454	1.0835008981248149	1.0	14.149201620253887	-9.858534275593655	1.991343508260531	1.005764543819555	1.175847104479335	0.417055204547781	0.06470506674573955	0.28398976585231783	2.3441864493139146	0.05985120310040862	0.017074880025296616	1.3850508699736515e-10	9.858534275593655	0.17008256065978	
S(ph)PSPSFR	ddPTM_K562_Methotrexat_30min_R1	1	SPSPSFR	7	0	P49585;C9JEJ2	P49585	PCYT1A	Choline-phosphate cytidylyltransferase A	1	S(0.971)PS(0.029)PSFR	93.429	0.013397	29329000.0	1958.8	1754.0	2328.3	2262.6	1907.7	1666.7	1555.5	2173.8	1832.9	2285.5	True	False	1872.6934974008957	2043.8186870976585	1839.6216481020922	2064.241370913123	2158.595988030365	1988.7661865666912	1904.3604712728827	2097.34622187843	1747.6888790643502	1871.573803052192	1.0005982635292703	1.0920321088938982	0.9829276543099761	1.1029441465502057	1.1533587318384626	1.0626170249462672	1.017518234208676	1.1206323888793723	0.9338070858943375	1.0	10.87003622480379	-9.768680416695975	24.999986996259647	0.9669035204392091	1.066976119978306	0.35893601118089014	0.05328083189036231	198.21726526648737	684323.8328476321	0.047570969750037086	0.013290256658217618	1.703411532923388e-10	9.768680416695975	0.10007259953909697	
S(ph)PSSDSWTCADTSTERR	ddPTM_K562_Methotrexat_30min_R1	1	SPSSDSWTCADTSTERR	17	1	F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;E5RHH7;Q8N6T3-4;H0YIQ0	F8VWH9	ARFGAP1	ADP-ribosylation factor GTPase-activating protein 1	1	S(0.773)PS(0.186)S(0.04)DS(0.001)WTCADTSTERR	68.26100000000001	0.026376	9767800.0	138.89	75.161	251.7	0.0	160.38	0.0	64.873	75.619	182.19	66.086	True	False	132.78456190219023	87.58007773144081	198.871609684017	0.0	181.47278112927083	0.0	79.42242163477063	72.9594369087428	173.72002666633955	54.11718501356689	2.4536487230239685	1.6183413403613833	3.6748328582530845	0.0	3.3533300204690355	0.0	1.4676007559310384	1.3481750185352817	3.2100713779327004	1.0	5.7580148922101415	-7.249419651922326	24.998900531743047	1.5127765013974461	2.4858807979251507	0.15842805159956208	1.1534634485676052	1564.4901922575546	3253856.9977090727	0.2976303135789133	0.5104836235055799	5.630932846814424e-08	7.249419651922326	0.9731042965277046	
S(ph)PSTTYLHTPTPSEDAAIPSK	ddPTM_K562_Methotrexat_30min_R1	3	SPSTTYLHTPTPSEDAAIPSK	21	0	Q13111	Q13111	CHAF1A	Chromatin assembly factor 1 subunit A	1	S(0.475)PS(0.056)T(0.056)T(0.036)Y(0.009)LHT(0.366)PT(0.002)PS(0.001)EDAAIPSK;S(0.866)PS(0.069)T(0.024)T(0.024)Y(0.003)LHT(0.013)PTPSEDAAIPSK;S(0.827)PS(0.039)T(0.039)T(0.039)Y(0.004)LHT(0.051)PTPSEDAAIPSK	94.838	0.00019728	101235000.0	4559.63	3077.49	5366.5	4595.6	3161.71	3593.84	3270.88	4856.74	5136.24	5508.2	True	False	4359.194124746808	3585.992914114125	4240.144987561688	4192.710883129299	3577.530283228752	4288.298717184159	4004.4581023960454	4685.925701373563	4897.457323479444	4510.611604450701	0.9664308317846549	0.7950125678246742	0.9400377065003472	0.9295215928128852	0.7931364074217206	0.9507133606788086	0.8877860595323205	1.038867034516977	1.0857634735491382	1.0	12.139107349824508	-9.27511783136433	6.1949851610027435	1.0479866200837897	0.8919659062079777	0.5585570832034813	0.05973988772159973	0.11233955229306833	19.14579058447116	0.03033723057140297	0.015250248142930216	5.307404259308452e-10	9.27511783136433	-0.15602071387581207	
S(ph)PSVAAMASPQLCR	ddPTM_K562_Methotrexat_30min_R1	1	SPSVAAMASPQLCR	14	0	P25325-2	P25325-2			1	S(0.718)PS(0.282)VAAMASPQLCR	80.37100000000001	0.029423	16219000.0	411.48	460.56	630.49	639.99	689.89	431.32	464.18	370.11	449.01	577.84	True	False	393.39183189224036	536.659711818528	498.15876515564514	583.8830703485767	780.6226273430142	514.6664856242543	568.2841810063946	357.09302151965517	428.1356231047432	473.1875766159171	0.8313655119723349	1.1341373661086853	1.0527722826501782	1.2339357565646958	1.6497107403490432	1.0876584911737979	1.2009702052420255	0.7546542622134498	0.904790498023277	1.0	8.886268386466186	-9.249590513158727	24.180710131676303	0.8722917876471918	1.1819179310657264	0.2929395775309449	0.20095684787279292	576.678979431703	1176868.293768233	0.1007761585937395	0.057534147248626245	5.628717946658692e-10	9.249590513158727	0.30962614341853456	
S(ph)PTFSEELPVLGDGQQLR	ddPTM_K562_Methotrexat_30min_R1	1	SPTFSEELPVLGDGQQLR	18	0	Q8N0Z3	Q8N0Z3	SPICE1	Spindle and centriole-associated protein 1	1	S(0.959)PT(0.033)FS(0.009)EELPVLGDGQQLR	92.295	0.0032124000000000002	5421900.0	299.32	320.53	226.83	200.78	288.93	387.69	232.34	220.99	418.94	434.54	True	False	286.16225119564825	373.4921344215581	179.22148281535786	183.1779291310602	326.9293593445583	462.6056056099118	284.4481593671112	213.21765644167556	399.4635708414091	355.840595221308	0.8041866359224004	1.0496051868092007	0.5036566519452189	0.5147752437215218	0.9187522832835615	1.300036060591129	0.7993696143358919	0.5991943002148731	1.1225913406337764	1.0	8.47508729617414	-7.96720181351711	24.599650406032108	0.9489403962894418	0.7252160652345194	0.21318735857144766	0.22484710713587758	299.283610231197	224470.49421183197	0.07462036748893988	0.08461095909583749	1.0784454599361825e-08	7.96720181351711	-0.2237243310549224	
S(ph)PTGPSNSFLANMGGTVAHK	ddPTM_K562_Methotrexat_30min_R1	2	SPTGPSNSFLANMGGTVAHK	20	0	H0Y6J6;Q5W012;Q96I25	H0Y6J6	RBM17	Splicing factor 45	1	S(0.532)PT(0.4)GPS(0.054)NS(0.013)FLANMGGTVAHK;S(0.92)PT(0.073)GPS(0.007)NS(0.001)FLANMGGTVAHK	113.67	0.001228	80900000.0	3337.9	2586.3999999999996	4996.6	3134.3	2865.5	2568.5	2347.5	3678.5	3937.8	4067.1000000000004	True	False	3191.169912688607	3013.75863871687	3947.8819425791007	2859.5207853146817	3242.363476280869	3064.8262735924563	2873.986632152423	3549.1250700063533	3754.7325374977318	3330.5087789952186	0.9581628887497937	0.9048943686093783	1.1853690245398896	0.8585837705485259	0.973533982774565	0.9202276519796726	0.8629272050799027	1.065640508858556	1.127375060884991	1.0	11.70152686942571	-9.392158720491652	8.82638839683905	1.0743750565001031	0.9552274407816327	0.23941196465721182	0.09125556708122295	0.4486008930732065	29.716168853368266	0.04967736548024435	0.02375393910085036	4.0536036236070226e-10	9.392158720491652	-0.11914761571847043	
S(ph)PTMEQAVQTASAHLPAPAAVGR	ddPTM_K562_Methotrexat_30min_R1	3	SPTMEQAVQTASAHLPAPAAVGR	23	0	Q8ND56;Q8ND56-2;Q8ND56-3	Q8ND56	LSM14A	Protein LSM14 homolog A	1	S(0.5)PT(0.5)MEQAVQTASAHLPAPAAVGR;S(0.722)PT(0.278)MEQAVQTASAHLPAPAAVGR;S(0.5)PT(0.5)MEQAVQTASAHLPAPAAVGR	96.44	0.00018627	20748500.0	626.64	754.53	1040.14	788.9300000000001	610.5899999999999	335.49	799.24	649.1999999999999	640.45	816.3199999999999	True	False	599.0936559175499	879.2032576828943	821.8288283541258	719.7657317928441	690.893287378236	400.3186943848676	978.4899151784884	626.3672680299368	610.6756192900664	668.4765376974688	0.8962074540134132	1.3152342798915013	1.2294056440408077	1.0767254962635462	1.033534085965052	0.5988522735049815	1.4637610447015	0.9370071090115218	0.9135333625821865	1.0	9.384733115027503	-7.595181270524806	3.316555004897327	0.9923499567106823	1.162649021135488	0.09048227963461708	0.22072605535478348	0.5827427992395668	12.912119913790015	0.06742445047319391	0.09170898758673458	2.5399123482051742e-08	7.595181270524806	0.1702990644248058	
S(ph)PTPALCDPPACSLPVASQPPQHLSEAGR	ddPTM_K562_Methotrexat_30min_R1	1	SPTPALCDPPACSLPVASQPPQHLSEAGR	29	0	A0A590UJ84;Q9P2R6;A0A590UK57;H7BYW9	A0A590UJ84	RERE	Arginine-glutamic acid dipeptide repeats protein	1	S(0.756)PT(0.244)PALCDPPACSLPVASQPPQHLSEAGR	75.727	0.00010097	10964000.0	286.54	163.28	244.04	435.35	304.42	407.37	255.93	350.04	508.14	456.86	True	False	273.9440446933085	190.25924471454155	192.8193390039233	397.1835414244795	344.4565658521801	486.08848708326184	313.32881736603593	337.72889479543943	484.51668231096005	374.11822693608576	0.7322392360747209	0.5085537966773412	0.5153968053977346	1.0616524746128826	0.920715808671431	1.2992911119679422	0.8375128363354639	0.9027330679965425	1.2950897535225803	1.0	8.547350445077328	-7.2643630153161665	24.994996910178394	1.0379682617338515	0.577712316375635	0.6478073416438133	0.15529565728999653	151.97168388596248	1299251.8998779603	0.042650170085912695	0.0665054744948669	5.440477075844087e-08	7.2643630153161665	-0.46025594535821646	
S(ph)PTPPLFSLPEAR	ddPTM_K562_Methotrexat_30min_R1	2	SPTPPLFSLPEAR	13	0	J3KRD7;J3QQZ3;J3KT14;A0A087WWS1;Q96FV9-2;Q96FV9	J3KRD7	THOC1	THO complex subunit 1	1	S(0.642)PT(0.358)PPLFSLPEAR;S(0.936)PT(0.051)PPLFS(0.013)LPEAR	188.48	7.0544e-05	35486900.0	2701.84	2369.31	3385.5	2929.98	2459.9900000000002	2478.9	2719.5099999999998	2805.9	2875.59	3148.69	True	False	2583.0703486918687	2760.7982061159382	2674.9298155949114	2673.1132024874164	2783.5218035303346	2957.912341681269	3329.429344411004	2707.2149066007396	2741.90444855074	2578.4317295700735	1.001799007927415	1.070727673125661	1.0374251080291073	1.0367205661610168	1.0795406260356786	1.1471749698699487	1.2912613920424225	1.049946320297625	1.063400057137803	1.0	11.33227813174484	-7.994061486802364	3.769385679356001	1.124350433235152	1.0397693200840148	0.16503232077348773	0.07454979867181441	0.37363004890167795	11.752540292008124	0.025497582275544693	0.02771971951105961	1.0137678477488924e-08	7.994061486802364	-0.08458111315113714	
S(ph)PVIGSEVFLPNSNHVASGAGEAEER	ddPTM_K562_Methotrexat_30min_R1	1	SPVIGSEVFLPNSNHVASGAGEAEER	26	0	P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2;P29590-12;P29590-13;P29590-11	P29590-2	PML	Protein PML	1	S(0.977)PVIGS(0.021)EVFLPNS(0.002)NHVASGAGEAEER	84.29899999999999	0.00028529	15395000.0	210.98	190.93	196.71	281.72	272.33	214.96	0.0	252.86	383.83	199.8	True	False	201.7055718203189	222.47793724490086	155.42325920120373	257.02204499851706	308.146168380935	256.497977719071	0.0	243.9667704775876	365.9858270780016	163.61428389841512	1.232811506515861	1.3597708705129499	0.9499369828718803	1.5709022395507777	1.8833695997609652	1.5676991739812003	0.0	1.491109239759664	2.2368818807118025	1.0	7.354154894104811	-15.997790657133113	0.007505365446177952	0.7323455888253985	1.8437613658583583	0.0007558980397444071	0.5743885464701376	1244182.502331332	708.1679731516269	58710.88054737426	46785.36750486742	1.0051001617226641e-16	15.997790657133113	1.1114157770329598	
S(ph)PVPAQIAITVPK	ddPTM_K562_Methotrexat_30min_R1	2	SPVPAQIAITVPK	13	0	A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3	A0A0A0MSA7	EIF4G3	Eukaryotic translation initiation factor 4 gamma 3	1	S(1)PVPAQIAITVPK;S(1)PVPAQIAITVPK	101.45	0.0050614	24185000.0	5367.9	3434.2	6803.799999999999	5515.6	4310.6	3797.9	3513.4	5413.5	5604.5	6932.9	True	False	5131.933543341979	4001.6431785808327	5375.775359428347	5032.055911521442	4877.519455891229	4531.790424168497	4301.369385901733	5223.104136598993	5343.948018285853	5677.284628825438	0.9039415634166847	0.7048516042798306	0.9468919934247739	0.8863490630665305	0.8591289277846775	0.7982320282409499	0.7576455413319017	0.9200004012621772	0.9412859082584789	1.0	12.47098535713648	-9.478637443304935	5.603544853643822	0.9594844305340531	0.8368817812463741	0.39209422512893954	0.06839299840295458	0.20805322298307302	16.48471425457119	0.04080501077006956	0.01817964198289705	3.321716445850797e-10	9.478637443304935	-0.12260264928767894	
S(ph)PVPSAFSDQSR	ddPTM_K562_Methotrexat_30min_R1	2	SPVPSAFSDQSR	12	0	Q9UQ35;Q9UQ35-2;I3L3Q8	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	S(0.998)PVPS(0.002)AFSDQSR;S(0.978)PVPS(0.022)AFSDQSR	113.24	0.0012962	93112000.0	876.35	683.13	983.3299999999999	794.04	947.01	725.13	670.27	824.26	925.74	836.5	True	False	837.826703311861	796.0056212753848	776.9424709995404	724.4277460266311	1071.5584141241482	865.251109896865	820.5951096625365	795.270308604985	882.7025494598888	685.001744149271	1.223101562102428	1.1620490430487498	1.134219697446835	1.0575560605708014	1.5643148696722755	1.2631370902149344	1.1979460149866683	1.1609755966280941	1.288613579453217	1.0	9.419963851238109	-12.44025519646103	2.6998004897934824	0.9930331872618089	1.2263511478560893	0.2201253699877932	0.12870719512750628	10482358.76434977	11149605.696283355	554729.7749224395	0.0334520969535983	3.628647685762668e-13	12.44025519646103	0.23331796059428045	
S(ph)PVSTRPLPSASQK	ddPTM_K562_Methotrexat_30min_R1	3	SPVSTRPLPSASQK	14	1	Q8ND56;Q8ND56-2;Q8ND56-3	Q8ND56	LSM14A	Protein LSM14 homolog A	1	S(0.997)PVS(0.001)T(0.001)RPLPSASQK;S(1)PVSTRPLPSASQK;S(1)PVSTRPLPSASQK	184.51	3.8477e-05	716650000.0	11988.7	8390.4	15548.2	12436.800000000001	8951.2	7666.9	7766.5	10801.1	10112.3	14591.8	True	False	11461.691102864059	9776.770987585061	12284.845298724807	11346.485053377672	10128.43969599906	9148.419917074556	9508.335326352195	10421.219190878235	9642.181380196642	11949.083622567043	0.9592108872028903	0.8182025748920736	1.0280993661742934	0.9495694742606618	0.847633175557537	0.7656168628527168	0.7957376169327955	0.8721354306364312	0.8069389824995797	1.0	13.544612361448271	-7.807791721432335	6.121306816765912	0.8341169667259196	0.9365488931229072	0.24028050663401268	0.07683680348970164	0.2480217838968666	21.820191097476396	0.023292909453660672	0.02689735943515764	1.556712019203008e-08	7.807791721432335	0.10243192639698762	
S(ph)QEDLNEPIKR	ddPTM_K562_Methotrexat_30min_R1	2	SQEDLNEPIKR	11	1	H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-4;Q7Z460-5;Q7Z460-3;Q7Z460	H0Y5T1;Q7Z460	CLASP1	CLIP-associating protein 1	1	S(1)QEDLNEPIKR;S(1)QEDLNEPIKR	93.62299999999999	0.010778	23948900.0	3598.1400000000003	2655.8199999999997	5076.4	4000.1	2700.76	2557.28	2194.36	2952.91	3503.5	4103.3	True	False	3439.970073891188	3094.6491137786224	4010.933013110624	3649.417443555899	3055.9572787298275	3051.438167386614	2686.501088873263	2849.0544815746775	3340.623049703721	3360.1526082100436	1.023754119228431	0.9209846916527833	1.193675847730991	1.086086814818791	0.9094697875516252	0.9081248750223039	0.7995175821208802	0.8478943708132267	0.9941878953775477	1.0	11.714311042103052	-7.793851111299285	8.04045008730586	0.8962444083426223	1.0562839931961976	0.41275761168860203	0.08454672420714911	0.21149981659494058	44.53923305558824	0.027166002648866587	0.03124013706185833	1.6074922533635066e-08	7.793851111299285	0.16003958485357528	
S(ph)QERDNLGMLVWSPNQNLSEAK	ddPTM_K562_Methotrexat_30min_R1	1	SQERDNLGMLVWSPNQNLSEAK	22	1	Q9UKL0	Q9UKL0	RCOR1	REST corepressor 1	1	S(0.943)QERDNLGMLVWS(0.057)PNQNLSEAK	52.19	0.017549000000000002	11734000.0	1525.5	1144.2	1937.0	1738.5	1496.5	1247.7	1366.0	1644.3	1454.5	1990.4	True	False	1458.440846582124	1333.2596019253945	1530.4501706711983	1586.0884041953784	1693.3159805459156	1488.8003665802244	1672.3602724260732	1586.4690370018884	1386.880612471546	1629.9192726296567	0.8947933011609372	0.817991187854573	0.9389729886450277	0.9731085648410286	1.038895612182054	0.9134196960431323	1.0260387127811206	0.9733420934659744	0.8508891426469237	1.0	10.670584796442995	-6.914312626263294	5.091023597542322	0.9690584986050028	0.8575013055864672	0.3974853537016809	0.05405378744107802	0.19017761597552643	8.366115199762248	0.01402527565619438	0.03032815661698944	1.218112426754366e-07	6.914312626263294	-0.11155719301853562	
S(ph)QGAGSSPRRPQGGSDAPSGHAAPSR	ddPTM_K562_Methotrexat_30min_R1	2	SQGAGSSPRRPQGGSDAPSGHAAPSR	26	2	M0R0Q5;M0R398;Q96IQ9-2	M0R0Q5	ZNF414		1	S(0.383)QGAGS(0.276)S(0.276)PRRPQGGS(0.064)DAPSGHAAPSR;S(0.368)QGAGS(0.286)S(0.286)PRRPQGGS(0.061)DAPSGHAAPSR	56.681000000000004	0.0038909999999999995	3929300.0	369.41	317.63	581.63	554.4499999999999	324.20000000000005	400.36	374.93	423.64	403.25	567.73	True	False	353.17117871904475	370.11295871312973	459.5538114442382	505.84222933915873	366.8379825546178	477.72390379422814	459.01759658909793	408.74034107856204	384.502995516776	464.90859558382004	0.7596572360111812	0.7960983346594217	0.9884820711201145	1.0880466271094327	0.7890539904816176	1.0275652210609592	0.9873286941762728	0.8791843062511602	0.8270507346372619	1.0	8.860803289521712	-6.68960646782261	5.890966887833096	0.9473848488236526	0.7715043187552122	0.37798264843967144	0.08768756188431742	0.20954842876408444	12.572616003087756	0.022747004361069773	0.06147223922786853	2.0435888862772593e-07	6.68960646782261	-0.1758805300684404	
S(ph)QS(ph)KT(ph)TQSGMSK	ddPTM_K562_Methotrexat_30min_R1	1	SQSKTTQSGMSK	12	1	O94986-1;O94986-2	O94986-1	CEP152	Centrosomal protein of 152 kDa	3	S(1)QS(0.998)KT(0.729)T(0.092)QS(0.092)GMS(0.089)K	87.831	0.0070131	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	63.742	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	52.1977061273913	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	5.705914502614472														
S(ph)QSDCGELGDFR	ddPTM_K562_Methotrexat_30min_R1	1	SQSDCGELGDFR	12	0	Q6JBY9;B7ZKW8;F6T4W9	Q6JBY9	RCSD1	CapZ-interacting protein	1	S(0.656)QS(0.344)DCGELGDFR	85.287	0.025936	91981000.0	167.72	279.62	262.13	138.53	161.06	253.43	199.91	176.63	171.65	336.15	True	False	160.34722962225754	325.82245227266117	207.1124952184003	126.3852899817002	182.2422130482627	302.4017607617429	244.7449063401877	170.41782278516297	163.67002896578944	275.269977639901	0.5825089644611314	1.1836468875617494	0.7523976896940717	0.4591321257236167	0.6620489986258722	1.0985642653603684	0.8891086068977518	0.6190933869588128	0.5945800205640192	1.0	8.104703460543941	-12.36774430189827	5.218257728959473	1.0001153581799158	0.7702127881872146	0.09395314343054495	0.22149114934725897	0.00031065261734980704	3.763960623769567e-05	0.22412007899209416	0.05432993427058176	4.2880090976066293e-13	12.36774430189827	-0.2299025699927012	
S(ph)QSLPHSATVTLGGTSDPSTLSSSALSER	ddPTM_K562_Methotrexat_30min_R1	1	SQSLPHSATVTLGGTSDPSTLSSSALSER	29	0	F8WDP1;A0A0A0MRY0;Q8WUA7-3;Q8WUA7-4;Q8WUA7	F8WDP1	TBC1D22A	TBC1 domain family member 22A	1	S(0.431)QS(0.431)LPHS(0.063)AT(0.063)VT(0.01)LGGTSDPSTLSSSALSER	52.122	0.0067546	18004000.0	713.65	613.92	908.67	951.43	926.64	652.44	724.49	841.42	1016.0	1027.8	True	False	682.2788005003821	715.3598451442389	717.9525847102732	868.0196090903701	1048.509402080232	778.5147961622195	886.9753248682038	811.8267816786035	968.7663817608043	841.6554604143695	0.8106390709619801	0.8499438057373835	0.853024329405296	1.0313241580622798	1.245770331679453	0.9249803901693168	1.0538461004358268	0.9645595137931138	1.1510248876468463	1.0	9.717085963117547	-7.266587301092971	4.653751811812054	1.055531579263271	0.8363089123422109	0.5670881452437864	0.08644920975336078	0.13982986727939592	8.531222993106574	0.024113012137699223	0.039437143926071574	5.412684321426911e-08	7.266587301092971	-0.21922266692105996	
S(ph)QSLPNSLDYTQTSDPGR	ddPTM_K562_Methotrexat_30min_R1	1	SQSLPNSLDYTQTSDPGR	18	0	H0YNE5;H0YLG5;Q96TC7	H0YNE5	RMDN3	Regulator of microtubule dynamics protein 3	1	S(0.941)QS(0.047)LPNS(0.012)LDYTQTSDPGR	327.02	7.749399999999995e-285	266430000.0	1915.7	2152.3	2442.7	3081.2	2140.6	1739.3	1778.6	2166.1	2266.3	1937.6	True	False	1831.4881217944128	2507.9309921552417	1930.010651470593	2811.075979871614	2422.1264202850566	2075.3951090750847	2177.4963254297336	2089.917035242832	2160.94020766192	1586.6818642721173	1.1542881802802978	1.5806136369408514	1.216381616837838	1.7716695723128981	1.5265356432344397	1.308009599030214	1.3723584887816498	1.31716198584117	1.361924060721045	1.0	10.631797176006721	-10.638489656287538	0.5847769863723201	0.984461011916266	1.4418385590616367	0.3424999842565891	0.1706875815703761	2.5122380079774977	1.3617548996668283	0.26693212861805415	0.07360285626005798	2.2988484609251463e-11	10.638489656287538	0.4573775471453707	
S(ph)QT(ph)LGSKS(ph)T(ph)T(ph)NEK	ddPTM_K562_Methotrexat_30min_R1	1	SQTLGSKSTTNEK	13	1	C9J9D2;B4DXS0;Q5VSY0-2;Q5VSY0	C9J9D2	GKAP1	G kinase-anchoring protein 1	5	S(0.853)QT(0.985)LGS(0.163)KS(1)T(1)T(1)NEK	63.816	0.021981	120170000.0	4179.5	3629.0	3504.1	4166.1	3514.7	3929.3	4023.0	4221.6	4267.3	4406.2	True	False	3995.774184391996	4228.630567546984	2768.63729635981	3800.864481287526	3976.9446554124484	4688.581614493607	4925.260158104023	4073.123935174342	4068.9141544172085	3608.1944830490347	1.1074165217988596	1.1719519519839356	0.7673193086920932	1.0533978972429665	1.1021979757731375	1.29942596955905	1.365020699755083	1.128853767253817	1.127687039468796	1.0	11.817061387160194	-7.95245655325235	3.4799198021449262	1.2037032613259753	1.018041491433669	0.2249885557897381	0.13586225194335147	0.3285346324412823	8.25014233298543	0.04630879729332819	0.05179200759223592	1.1156897591858657e-08	7.95245655325235	-0.1856617698923062	
S(ph)RAT(ph)GAS(ph)AAEMIETKS(ph)SK	ddPTM_K562_Methotrexat_30min_R1	1	SRATGASAAEMIETKSSK	18	2	A0A3B3ISP1;Q92625	A0A3B3ISP1	ANKS1A	Ankyrin repeat and SAM domain-containing protein 1A	4	S(1)RAT(1)GAS(1)AAEMIET(0.028)KS(0.514)S(0.459)K	42.661	0.032818	275220000.0	660.48	708.39	578.02	812.65	826.02	747.28	690.73	679.46	695.92	790.86	True	False	631.4460900364215	825.4394069287978	456.70150111066914	741.4062362205198	934.6561084200046	891.6812839128559	845.6437854852579	655.5630066784056	663.5668310974206	647.6275904099127	0.9750141893070844	1.2745587420176772	0.7051915450692923	1.1448033518016894	1.4431999535850821	1.3768426440085273	1.3057562679656867	1.0122530546659851	1.0246117381710362	1.0	9.339020638818019	-6.227333610726903	21.909164316814767	1.1515530595265766	0.975012494593492	0.05412853923153793	0.2079647638585704	9769.330567695904	6275133.9101153435	0.05567073227425409	6.975610832643563	5.92470033752931e-07	6.227333610726903	-0.17654056493308456	
S(ph)RDIFDCLEGAAR	ddPTM_K562_Methotrexat_30min_R1	1	SRDIFDCLEGAAR	13	1	A6NCC9;E9PME3;C9JHT9;C9JJV1;Q9Y5U2-2;Q9Y5U2;E9PL88;C9JDU0	A6NCC9	TSSC4	Protein TSSC4	1	S(1)RDIFDCLEGAAR	79.32600000000001	0.02745	8016900.0	967.21	813.88	1028.6	1037.6	809.49	767.06	845.99	844.68	1029.3	1234.0	True	False	924.6926065045541	948.3598364053842	812.7109166506942	946.6352189779266	915.9521236833359	915.2834889709278	1035.7247927304054	814.9721256308184	981.4480676637753	1010.5106422955168	0.9150745848692745	0.9384956443912867	0.804257652155456	0.9367889652577154	0.9064250145873002	0.9057633345570045	1.0249518900440386	0.8064953415824446	0.9712397144420747	1.0	9.980868800349173	-8.03614335575733	1.6622629425770188	0.9348655155402582	0.8939709863439674	0.09312244211419318	0.06552647192588495	1.127747653976656	6.294691463019121	0.025360989997242574	0.027320535524211337	9.201457917710674e-09	8.03614335575733	-0.040894529196290774	
S(ph)REDLSAQPVQTK	ddPTM_K562_Methotrexat_30min_R1	1	SREDLSAQPVQTK	13	1	G3V1L9;Q07157;A0A087X0K9;G5E9E7;Q07157-2	G3V1L9	TJP1	Tight junction protein ZO-1	1	S(0.998)REDLS(0.002)AQPVQTK	124.62	0.0020155	13471000.0	2553.8	1864.1	3911.9	2108.9	1756.8	1612.3	1747.2	2226.9	2609.2	2887.7	True	False	2441.53800983378	2172.110840717644	3090.845649276544	1924.0160112784774	1987.8499930658638	1923.854156477756	2139.0540761221355	2148.578664781064	2487.8988615061917	2364.709547614881	1.0324895978435873	0.9185529118823501	1.3070720048447668	0.8136373506078577	0.8406317786769503	0.8135689046539414	0.9045737047408852	0.9086015096222649	1.0520949027399848	1.0	11.207447275859263	-7.312169145140429	24.999930845318083	0.8944458441698472	1.0692912538845594	0.33669559594538967	0.115274089260293	400.43441055330277	197335.4952880074	0.03237485471806887	0.04801972208152218	4.873386488275918e-08	7.312169145140429	0.17484540971471219	
S(ph)REDSPELNPPPGIEDNR	ddPTM_K562_Methotrexat_30min_R1	1	SREDSPELNPPPGIEDNR	18	1	Q03164-2;Q03164;Q03164-3	Q03164-2	KMT2A	Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180	1	S(0.55)REDS(0.45)PELNPPPGIEDNR	137.99	8.856899999999999e-09	31501000.0	1233.5	1196.9	1635.3	1434.1	1093.4	1137.2	1068.0	1292.5	1548.5	1338.6	True	False	1179.2768169511962	1394.6673811785563	1292.0728776967544	1308.3746795838897	1237.2012650376907	1356.9478054620756	1307.5261866405913	1247.0420424040265	1476.5105729887846	1096.166568700794	1.0758189956011035	1.2723133700670635	1.1787194707353226	1.1935911173925058	1.128661738429092	1.2379029284485172	1.1928170626388528	1.137639185513616	1.3469764679457288	1.0	10.09825132527769	-12.13724721934768	4.813943655445355	0.9999862875043716	1.1951460553988822	0.39451194994837946	0.07285550441344969	9.897388735800496e-06	1.7737594073159686e-06	0.0651159070640473	0.015791817998968942	7.290423894102172e-13	12.13724721934768	0.19515976789451062	
S(ph)RESLNVDVVK	ddPTM_K562_Methotrexat_30min_R1	1	SRESLNVDVVK	11	1	Q07866-4;Q07866-6;Q07866-7;H0YG16;Q07866-9;G3V5R9;H0YJT3;G3V3H3;F8W6L3;H0YGB8;E7EVH7;G5E9S8;H0YJU9;H0YJL0;G3V2E7;Q07866-8;Q07866-2;Q07866-3;Q07866-5;Q07866-10;Q07866	Q07866-4	KLC1	Kinesin light chain 1	1	S(0.946)RES(0.054)LNVDVVK	112.62	0.001538	14176000.0	2276.1	1519.6	3959.7	2730.0	1944.6	1948.9	1400.5	2380.8	2413.4	3143.6	True	False	2176.0453693251884	1770.688071216421	3128.6130825021914	2490.665138598436	2200.348984810949	2325.497342653041	1714.5977756462041	2297.0659145497143	2301.2015607692188	2574.2635778931835	0.8453079117508616	0.68784256842323	1.215342946763321	0.9675252992690182	0.8547489090498448	0.9033641164889041	0.6660536979859137	0.8923196265821652	0.893926162235709	1.0	11.329944062793837														
S(ph)RFSGGFGAR	ddPTM_K562_Methotrexat_30min_R1	1	SRFSGGFGAR	10	1	A0A2R8Y5G6;A0A2R8Y4A4;A0A2R8YFS5;A0A2R8YFR4;A0A2R8YCW1;A0A2R8YDT5;A0A0J9YVQ7	A0A2R8Y5G6			1	S(1)RFSGGFGAR	78.098	0.024822999999999998	9515600.0	1330.3	1267.8	1813.2	1442.2	1480.7	1116.2	1442.8	1665.9	1601.6	2164.0	True	False	1271.821604856244	1477.2824010846148	1432.634098844098	1315.7645651599512	1675.4380036046355	1331.8898526703906	1766.384627420454	1607.3093527588912	1527.141965578843	1772.078630411264	0.7177004355394093	0.8336438212912523	0.8084483804827624	0.7424978455129774	0.9454648201563155	0.7515974911120539	0.9967868226087189	0.9070192062447404	0.8617800245265775	1.0	10.791226905026571	-3.0000000000012097	0.10191083195886048	1.078111147715674	0.10119096061804982	0.4812712158613608	0.070884939618384	106.8603840626593	0.7712594006852842	0.8206251724725776	14.609799539502491	0.0009999999999972145	3.0000000000012097	-0.9769201870976242	
S(ph)RLALADGVTMQVT(ph)VRS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	SRLALADGVTMQVTVRSK	18	2	Q9UBF2	Q9UBF2	COPG2	Coatomer subunit gamma-2	3	S(1)RLALADGVTMQVT(1)VRS(1)K	90.762	0.01669	4157100.0	868.16	1031.7	1341.9	1151.3	1110.8	752.04	892.51	1191.2	1124.3	1077.7	True	False	829.9967259054321	1202.1708890984357	1060.2535281485202	1050.367316508565	1256.889670023656	897.361086545638	1092.678086927522	1149.304820821412	1072.0315383992838	882.5180868734831	0.9404869296740199	1.3622053836396644	1.2013958058408802	1.1901935293243961	1.4242083972199002	1.0168189183801768	1.2381367624980668	1.3023017181359766	1.2147417195688242	1.0	9.785482035949235	-12.377188593777733	3.60645396497868	0.998764034397408	1.2178449414504957	0.17138348855957908	0.1376060505802379	42402693.65299864	31326297.4694309	480220.66266149044	0.03341974860852528	4.1957674187254255e-13	12.377188593777733	0.2190809070530877	
S(ph)RLAPT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SRLAPTR	7	1	A0A2R8YEJ5	A0A2R8YEJ5			2	S(1)RLAPT(1)R	50.193999999999996	0.026785000000000003	6948700.0	1548.7	1285.8	1986.3	1646.0	1450.3	1516.5	1221.9	1696.1	1700.7	1831.5	True	False	1480.6210023610208	1498.2565951369268	1569.402774395562	1501.697735579864	1641.0398707555903	1809.5421623137859	1495.9421792660469	1636.4472016413679	1621.6348282092524	1499.797602402139	0.9872138747185593	0.9989725231839655	1.0464097101381815	1.00126692640039	1.0941742193261488	1.2065242399478082	0.9974293710498555	1.0911120267297167	1.0812357784890265	1.0	10.550552106908315	-7.761616481354984	24.99997479174535	1.0853246334617797	1.0104979440444206	0.26410278134837795	0.05645670504754377	6.282026085519906	886791.4673385642	0.01710417280151535	0.020640288598181962	1.7313446075963507e-08	7.761616481354984	-0.07482668941735904	
S(ph)RLSAIEIDIPVVSHTT	ddPTM_K562_Methotrexat_30min_R1	1	SRLSAIEIDIPVVSHTT	17	1	P56749	P56749	CLDN12	Claudin-12	1	S(0.675)RLS(0.325)AIEIDIPVVSHTT	180.02	2.1613000000000004e-07	50660000.0	1304.3	1315.8	1388.7	1668.7	1129.0	1056.0	845.25	1505.4	1396.6	1610.8	True	False	1246.9645337247232	1533.2135852241167	1097.2308477083602	1522.4076618238864	1277.483289031967	1260.0570546675629	1034.8188288932204	1452.4542287311576	1331.6723708337984	1319.0685110288648	0.9453372006826992	1.1623456798526866	0.831822485742251	1.1541535933083706	0.9684737967367126	0.9552627813734456	0.7845072642103089	1.101121144646424	1.009555121435734	1.0	10.365303783258147	-7.954038608368057	24.999926603343887	0.9644826753509594	1.0248607479282266	0.04794538685900773	0.11560525238368285	407.52612243881623	221665.25880933675	0.035105484609494704	0.039805863724730654	1.1116328997770215e-08	7.954038608368057	0.06037807257726713	
S(ph)RLTPVSPESSSTEEK	ddPTM_K562_Methotrexat_30min_R1	1	SRLTPVSPESSSTEEK	16	1	Q13501;E7EMC7;Q13501-2	Q13501	SQSTM1	Sequestosome-1	1	S(0.5)RLT(0.5)PVSPESSSTEEK	127.03	0.00011232	66325000.0	2690.9	1891.3	4345.8	2740.2	1796.3	1708.6	1936.2	2587.2	2455.0	3433.1	True	False	2572.611257992684	2203.8051783966944	3433.675968870882	2499.9709204349597	2032.5449354190628	2038.7627685653379	2370.442137241117	2496.2067095610814	2340.867585849189	2811.332322580827	0.9150861452163737	0.7839006298528174	1.2213696478681462	0.8892477422021616	0.7229828075085656	0.7251945108694002	0.8431739350775261	0.8879088002195138	0.8326541714927007	1.0	11.457038286868901	-7.519182890647416	24.998813676079152	0.8229204650848196	0.9712989373367934	0.1924508216309796	0.1250747196347876	234.81593976936463	1588304.8169712522	0.0369630013968918	0.04882359243751031	3.0256389988123726e-08	7.519182890647416	0.14837847225197376	
S(ph)RQPSPLLLLPPPAGLTSDPGPSVR	ddPTM_K562_Methotrexat_30min_R1	1	SRQPSPLLLLPPPAGLTSDPGPSVR	25	1	I3L2J0	I3L2J0	CIC		1	S(0.652)RQPS(0.348)PLLLLPPPAGLTSDPGPSVR	83.601	0.00040065	36793000.0	1965.7	1926.7	2984.4	2626.5	2542.7	2212.0	2208.4	2189.2	2530.1	2719.3	True	False	1879.2901816627214	2245.054426699579	2358.0152242390955	2396.23882290432	2877.1096182653505	2639.4376940574325	2703.689916270674	2112.204595149628	2412.4762032411536	2226.808419444246	0.8439388702022889	1.0081937930070728	1.0589214607099409	1.0760866547748906	1.292032845368621	1.1853007519686711	1.2141547035040605	0.9485344930017734	1.083378427248468	1.0	11.120761727742032	-6.31014164525846	1.2885425985626096	1.1241313572656988	0.7411928760492885	0.4244558262839151	0.09544439163603936	1.2839756534621616	1.9921733550670493	0.030500272757085556	0.6355743899426021	4.89619103925894e-07	6.31014164525846	-0.3829384812164103	
S(ph)RRYS(ph)GSDS(ph)DS(ph)IS(ph)EGKR	ddPTM_K562_Methotrexat_30min_R1	1	SRRYSGSDSDSISEGKR	17	3	O14646;O14646-2	O14646;O14646-2	CHD1	Chromodomain-helicase-DNA-binding protein 1	5	S(0.915)RRY(0.492)S(0.576)GS(0.202)DS(0.821)DS(0.996)IS(0.998)EGKR	54.812	0.031435000000000005	0.0	167.65	274.75	314.33	232.32	257.85	232.15	206.15	341.33	259.31	203.69	True	False	160.2803067384419	320.14776754850755	248.3564285736078	211.95286630006925	291.7617945765212	277.00970193283575	252.384385183481	329.3252304323144	247.2547346992071	166.79976720354443	0.9609144510546775	1.9193538031610906	1.4889494915813666	1.2707024107619098	1.7491738715707355	1.6607319457155059	1.5130979462069531	1.9743746406458795	1.4823446030202434	1.0	7.381973465040956	-6.240213449415635	23.9841085934202	1.5885380013146724	0.9609133481271003	0.2946337009998885	0.2763344851917433	3631.342003249709	4103106.921615111	0.06487733165620134	2.6974573985199264	5.75157186474552e-07	6.240213449415635	-0.6276246531875721	
S(ph)RS(ph)PSSPELNNK	ddPTM_K562_Methotrexat_30min_R1	1	SRSPSSPELNNK	12	1	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	S(1)RS(0.949)PS(0.047)S(0.004)PELNNK	145.61	2.1677e-07	14928000.0	5209.6	3920.7	8251.8	5610.7	4031.5	3575.0	3384.3	3843.7	4754.5	6620.7	True	False	4980.5922217989055	4568.5290344947525	6519.859947519154	5118.8186421737155	4561.712913846212	4265.818153822476	4143.315424576546	3708.5148923700986	4533.464332757624	5421.6270741052895	0.9186526763500851	0.8426490741709083	1.202565181707025	0.9441480522742252	0.841391864747358	0.7868151194309962	0.764219922902075	0.6840224976156444	0.8361815135552761	1.0	12.404510165664666	-7.793427306073185	3.3087037537418906	0.7939928786576905	0.9868761874468822	0.3129128638211026	0.11405113647244765	0.26294800166957555	5.948608522446406	0.036556229732374136	0.04443586469616313	1.6090616864536723e-08	7.793427306073185	0.1928833087891917	
S(ph)RSDIDVNAAAGAK	ddPTM_K562_Methotrexat_30min_R1	2	SRSDIDVNAAAGAK	14	1	E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2	E3W994	CLASP2	CLIP-associating protein 2	1	S(0.5)RS(0.5)DIDVNAAAGAK;S(0.764)RS(0.236)DIDVNAAAGAK	164.5	1.003e-08	166049000.0	10904.099999999999	8116.799999999999	14725.6	11865.1	8105.6	7671.9	6956.4	9378.4	9538.2	12040.0	True	False	10424.76882020068	9457.963237989896	11634.897797230666	10824.90510475616	9171.628474382209	9154.386096310667	8516.54977972528	9048.556356272276	9094.771163888692	9859.439330014613	1.0573389085589342	0.9592800281449552	1.180077021399291	1.097922989576337	0.9302383398680151	0.9284895205392069	0.8637965602971722	0.9177556708246274	0.9224430375266798	1.0	13.26728989284682	-7.780766752397159	10.748138893159313	0.9198292827511335	1.0730915178032236	0.5938634036186367	0.05918156348143747	0.2809612061633593	152.30958286832242	0.018804687670494428	0.021692337094800417	1.6566594707494217e-08	7.780766752397159	0.15326223505209013	
S(ph)RSDIDVNAAASAK	ddPTM_K562_Methotrexat_30min_R1	1	SRSDIDVNAAASAK	14	1	H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-4;Q7Z460-5;Q7Z460-3;Q7Z460	H0Y5T1;Q7Z460	CLASP1	CLIP-associating protein 1	1	S(0.5)RS(0.5)DIDVNAAASAK	156.08	2.7727e-08	186150000.0	4050.9	2994.6	5108.5	4279.7	2563.2	2759.9	2269.3	3532.3	3306.6	4834.9	True	False	3872.8272864107025	3489.4067505032203	4036.2956617830782	3904.505345662904	2900.305727587897	3293.21161475095	2778.2482915201226	3408.067006873303	3152.8768877266484	3959.2527588611	0.9781712667227493	0.8813296253172194	1.019458950366215	0.9861722864053911	0.7325386642963874	0.831776048493115	0.7017102621958645	0.8607854093795344	0.7963312977859969	1.0	11.951012456681635	-7.749004852518581	24.990918140530557	0.8081848362484181	0.9640132464227985	0.42429456139550836	0.08241262957966254	198.90994869234663	399767.510221579	0.023112243527344763	0.02962471107982618	1.7823588524408092e-08	7.749004852518581	0.15582841017438043	
S(ph)RSHSDNDRPNCSWNTQYSSAYYTSR	ddPTM_K562_Methotrexat_30min_R1	1	SRSHSDNDRPNCSWNTQYSSAYYTSR	26	2	O75494-6;O75494-3	O75494-6	SRSF10	Serine/arginine-rich splicing factor 10	1	S(0.504)RS(0.389)HS(0.089)DNDRPNCS(0.017)WNT(0.001)QYSSAYYTSR	61.038999999999994	0.0023585999999999998	33544000.0	552.33	315.21	649.97	531.64	355.77	431.69	385.39	568.91	498.68	608.99	True	False	528.0502345412683	367.2930948460965	513.550179365596	485.03194662434885	402.5599909113399	515.107982887727	471.8235178552594	548.9011128387419	475.4964756461398	498.69600976624565	1.0588619603930296	0.7365069855246249	1.029786020558522	0.9726004161366729	0.8072252094016801	1.032909774291505	0.9461144838043075	1.1006727587333793	0.9534796074847677	1.0	8.962016849337848														
S(ph)RSPGSPVGEGTGSPPK	ddPTM_K562_Methotrexat_30min_R1	4	SRSPGSPVGEGTGSPPK	17	1	E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;P35611;P35611-3;A0A0A0MSR2;H0Y9H2	E7EV99	ADD1	Alpha-adducin	1	S(0.582)RS(0.102)PGS(0.304)PVGEGT(0.003)GS(0.01)PPK;S(0.37)RS(0.199)PGS(0.302)PVGEGT(0.007)GS(0.121)PPK;S(0.884)RS(0.087)PGS(0.027)PVGEGTGS(0.002)PPK;S(0.759)RS(0.115)PGS(0.099)PVGEGT(0.002)GS(0.025)PPK	139.74	2.4205e-06	54937900.0	9817.7	7068.700000000001	13037.4	10335.1	7782.6	6726.99	6022.13	10773.7	10435.0	12831.5	True	False	9386.125663382056	8236.682527643801	10301.027906612646	9429.037829277915	8806.148312861103	8026.885611911122	7372.745949769574	10394.782864408702	9949.879127631888	10507.591010222795	0.8932709366257527	0.7838792468825979	0.98034153561847	0.8973548570842204	0.8380749026388289	0.7639130228900036	0.7016590141923736	0.9892641285995675	0.9469229548382392	1.0	13.359144331821252	-9.316468798378862	24.996245233689418	0.976070344274084	0.8399630673871229	0.4315936085940687	0.07449734310480248	340.53118486470606	154678.93797777008	0.04388685723816548	0.02108257823278634	4.825376464361576e-10	9.316468798378862	-0.13610727688696111	
S(ph)RSPHEAGFCVYLK	ddPTM_K562_Methotrexat_30min_R1	1	SRSPHEAGFCVYLK	14	1	Q9NTZ6	Q9NTZ6	RBM12	RNA-binding protein 12	1	S(0.5)RS(0.5)PHEAGFCVYLK	77.324	0.028595999999999996	9526400.0	1104.0	685.67	1080.9	1298.2	830.23	898.6	879.67	1679.3	1417.5	1706.8	True	False	1055.4694818922742	798.965313102766	854.0338613724824	1184.3888215855284	939.4197972125858	1072.2417323146512	1076.9583900768987	1620.2380671636993	1351.600734395611	1397.681980769845	0.7551571075638539	0.571635983074415	0.6110358959497206	0.8473950711829064	0.6721270003746862	0.7671571552521977	0.77053178397829	1.1592322784838867	0.9670302350547207	1.0	10.448820421513505	-9.125567743155248	4.567196762991277	1.0454500577652537	0.7035383362285699	0.7494026394116264	0.08755279400820953	0.1125952633519174	3.6611682359353748	0.04395868015682455	0.024717908128914157	7.48914530431044e-10	9.125567743155248	-0.3419117215366838	
S(ph)RSPLLVTVVESDPRPQGQPR	ddPTM_K562_Methotrexat_30min_R1	3	SRSPLLVTVVESDPRPQGQPR	21	2	A0A2R8YH03;Q5VWN6;Q5VWN6-2	A0A2R8YH03	FAM208B	Protein FAM208B	1	S(0.617)RS(0.383)PLLVTVVESDPRPQGQPR;S(0.5)RS(0.5)PLLVTVVESDPRPQGQPR;S(0.5)RS(0.5)PLLVTVVESDPRPQGQPR	106.02	4.4066e-05	145868000.0	4833.8	4187.3	5556.700000000001	4985.7	4579.8	4678.4	4204.0	4773.9	5373.200000000001	5248.1	True	False	4621.311939828695	4879.180153069575	4390.424606798479	4548.611421798617	5182.123974409742	5582.434587648412	5146.854015577753	4605.99923112772	5123.401104800352	4297.618234871236	1.075319325092904	1.1353219123745093	1.0215948385489906	1.0584028578645728	1.2058130087874144	1.2989600943034139	1.1976061470085326	1.0717562564664898	1.1921489589811967	1.0	12.069321615933996	-7.755323474656051	24.95323778715437	1.1733587970687311	1.0734880951432808	0.21560860263322323	0.08055654743397457	207.77666338620466	847735.228400228	0.024493511850428272	0.03080682330012039	1.7566147508674553e-08	7.755323474656051	-0.09987070192545033	
S(ph)RSPSS(ph)PELNNK	ddPTM_K562_Methotrexat_30min_R1	1	SRSPSSPELNNK	12	1	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	S(0.968)RS(0.043)PS(0.15)S(0.839)PELNNK	112.02	0.030594	12547000.0	7586.2	5547.7	11562.0	7830.1	5605.4	4808.6	4845.0	6761.9	6894.3	10027.0	True	False	7252.719731459398	6464.363130223313	9135.294204078682	7143.6472900145145	6342.608351053838	5737.793894956857	5931.614582653243	6524.080144318595	6573.785497808582	8211.01313638343	0.8832916975034684	0.7872795991007957	1.1125660198495744	0.8700080211004216	0.7724513705804961	0.698792438844409	0.7223974050619829	0.794552393956119	0.8006058921864092	1.0	13.003344528182577	-7.6235220281772405	4.766392846498701	0.7798127363184212	0.9249070869384313	0.21622965487648493	0.10741838271487267	0.2798956307456286	10.697611205233065	0.03182744868543416	0.04153542119757994	2.3794576076355814e-08	7.6235220281772405	0.14509435062001008	
S(ph)RSSHSLPSEASSQPQVK	ddPTM_K562_Methotrexat_30min_R1	2	SRSSHSLPSEASSQPQVK	18	1	A0A0D9SGJ6;J3KQV8;O43426	A0A0D9SGJ6	SYNJ1	Synaptojanin-1	1	S(0.757)RS(0.235)S(0.007)HS(0.001)LPSEASSQPQVK;S(0.532)RS(0.41)S(0.022)HS(0.03)LPS(0.005)EAS(0.001)SQPQVK	127.74	5.5003e-06	32565000.0	5544.0	3916.8	7385.6	6045.3	4361.7	4154.299999999999	3950.1000000000004	5109.1	5718.5	6611.0	True	False	5300.292398198164	4563.984625783418	5835.463490195772	5515.317934933745	4935.340001568403	4957.059680118796	4836.010477386703	4929.410057134553	5452.648183168468	5413.683838100213	0.9790546616143287	0.8430460223153752	1.077909915818721	1.0187735560245053	0.9116417118477921	0.9156537079672431	0.8932938498092589	0.9105463496856879	1.0071973809763388	1.0	12.402394920548238	-5.870912916122879	19.951409350178544	0.949532570276453	12.087335531259711	0.010590574146052467	0.06764085100923324	3964.4545117755233	607038.9958012822	0.016775126594380022	18819.976408472332	1.3461302503912608e-06	5.870912916122879	11.137802960983258	
S(ph)RTGS(ph)ESSQTGTSTTSSR	ddPTM_K562_Methotrexat_30min_R1	2	SRTGSESSQTGTSTTSSR	18	1	E7EX17;P23588-2;P23588	E7EX17	EIF4B	Eukaryotic translation initiation factor 4B	2	S(0.854)RT(0.146)GS(0.998)ES(0.001)SQTGTSTTSSR;S(0.655)RT(0.35)GS(0.994)ES(0.002)SQTGTSTTSSR	114.19	0.0014817	3917800.0	388.99	351.37	676.5799999999999	603.9	553.47	367.64	280.07	505.24	715.64	475.23	True	False	371.8904653634747	409.42792023118847	534.5751040127617	550.9570246152367	626.2610061829253	438.6812268730896	342.88282686557153	487.47042282724186	682.370052601675	389.16124192714653	0.9556205122633845	1.0520778436302658	1.373659672185026	1.4157551298964643	1.6092584222458755	1.1272479877510864	0.8810816441215936	1.2526181189402705	1.7534378532213106	1.0	8.604224223470684	-6.648764457709378	4.784062497050589	1.3039718347994729	0.979198222240613	0.18959583966712268	0.24885353775303487	0.3457312970587947	12.62473196564673	0.06729491879017004	0.19045255936470531	2.2450992370613429e-07	6.648764457709378	-0.32477361255885984	
S(ph)RTGSESSQTGTSTTSSR	ddPTM_K562_Methotrexat_30min_R1	1	SRTGSESSQTGTSTTSSR	18	1	E7EX17;P23588-2;P23588	E7EX17	EIF4B	Eukaryotic translation initiation factor 4B	1	S(0.498)RT(0.498)GS(0.003)ESSQTGTSTTSSR	81.60600000000001	0.0057101999999999995	5518000.0	0.0	0.0	0.0	0.0	58.835	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	66.57283375570927	0.0	0.0	0.0	0.0	0.0											0.0														
S(ph)RTPPSAPSQSR	ddPTM_K562_Methotrexat_30min_R1	1	SRTPPSAPSQSR	12	1	Q9UQ35;I3L3Q8	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	S(0.847)RT(0.153)PPSAPSQSR	90.61399999999999	0.012503	10587000.0	717.7	643.78	973.74	593.2	719.62	757.41	737.43	628.97	777.86	808.79	True	False	686.150767349715	750.153702611021	769.3652809444364	541.1950770024152	814.2626434483473	903.7687630452252	902.8174492643922	606.8487685964103	741.6974583823416	662.3102936646609	1.0359959280613642	1.1326318038336827	1.1616387187452946	0.8171322145816318	1.2294277338540391	1.3645700084842995	1.3631336518551895	0.9162605117287642	1.1198640055530766	1.0	9.371363470629358	-6.260397964314187	21.456773347067415	1.1301918257288233	1.0359960447315741	0.02184398255288622	0.16759091759885306	64.80793258046974	1333684.417349411	0.044050608849809034	0.25931337751752365	5.490375345446634e-07	6.260397964314187	-0.09419578099724912	
S(ph)RTSVQTEDDQLIAGQSAR	ddPTM_K562_Methotrexat_30min_R1	1	SRTSVQTEDDQLIAGQSAR	19	1	G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-6;P26232-3;P26232-2;P26232-5;P26232	G3XAM7	CTNNA1;CTNNA2	Catenin alpha-1;Catenin alpha-2	1	S(0.493)RT(0.493)S(0.014)VQTEDDQLIAGQSAR	183.6	8.0631e-13	31032000.0	650.64	467.6	837.29	722.55	646.77	603.4	446.39	576.9	557.79	587.24	True	False	622.0386446543382	544.8629521589884	661.5542712448572	659.2051633312459	731.8315915387115	719.9985102144001	546.5043206502743	556.6101000099669	531.858464647991	480.88514552805447	1.2935285076674279	1.133041761064756	1.375701198918116	1.3708162322364528	1.5218427899973819	1.4972359136271052	1.136454984589229	1.1574699388952008	1.1059989471372906	1.0	8.909548552037418	-8.863249595546568	7.292982930263477	1.1090271197608346	1.36220157470235	0.593831497337556	0.1075603079891474	0.19536300380093863	12.326378286319102	0.0510532603372725	0.03436318186386844	1.3700941262273588e-09	8.863249595546568	0.25317445494151536	
S(ph)RVSVSPGRT(ph)SVTK	ddPTM_K562_Methotrexat_30min_R1	1	SRVSVSPGRTSVTK	14	2	M0R088	M0R088	SRRM1		2	S(0.903)RVS(0.097)VSPGRT(0.899)S(0.096)VT(0.005)K	132.25	0.0022795000000000003	19874000.0	7694.0	6365.1	11129.0	9928.9	6345.1	6114.9	5782.7	6809.8	6821.6	8983.5	True	False	7355.780972535474	7416.824586798922	8793.174986783568	9058.448752611732	7179.591866463004	7296.517882184351	7079.617677421856	6570.29547416862	6504.465304940453	7356.501098105166	0.999902110315748	1.008200024425918	1.1952930978353893	1.231352871672233	0.9759519873261857	0.9918462302770178	0.9623620771626571	0.8931277772609791	0.8841792066905048	1.0	12.844804038899298	-7.932629661808233	9.333927971428835	0.9453888374471671	1.107686831277458	0.5163535363476859	0.07509726071867429	0.3014764866512954	38.980671721334566	0.025901316725175344	0.029384743800151988	1.1678050210405015e-08	7.932629661808233	0.16229799383029087	
S(ph)S(ph)EQPQVSMDT(ph)GSSRSVLESLKRY(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SSEQPQVSMDTGSSRSVLESLKRYR	25	3	Q9NR48-2;Q9NR48	Q9NR48-2	ASH1L	Histone-lysine N-methyltransferase ASH1L	4	S(0.694)S(0.694)EQPQVS(0.601)MDT(0.759)GS(0.063)S(0.094)RS(0.095)VLES(0.121)LKRY(0.879)R	42.941	0.021863	20650000.0	655.18	649.78	681.22	640.4	543.48	630.13	657.1	585.11	659.91	671.31	True	False	626.3790716903808	757.1451006284595	538.2412314221135	584.2571262851427	614.9571460789131	751.8937044106733	804.4714019115466	564.531349656495	629.2309281375713	549.7292538730983	1.139431942683146	1.3773054559021922	0.9791023992810164	1.0628088684907697	1.1186545772237042	1.3677527603147048	1.4633956556680792	1.0269261562471144	1.1446196899734673	1.0	9.102577444290786														
S(ph)SAGGGGEPGEGAYSQPGYHVR	ddPTM_K562_Methotrexat_30min_R1	2	SSAGGGGEPGEGAYSQPGYHVR	22	0	E7ESJ3;Q9UPS8	E7ESJ3	ANKRD26	Ankyrin repeat domain-containing protein 26	1	S(0.5)S(0.5)AGGGGEPGEGAYSQPGYHVR;S(0.5)S(0.5)AGGGGEPGEGAYSQPGYHVR	189.07	2.0981e-19	30549000.0	2696.0	1943.36	3053.5	3115.2	2128.96	2366.1	2247.8999999999996	2785.6	2573.5	3218.2	True	False	2577.4870680992512	2264.4672085279976	2412.612078546468	2842.095252660017	2408.9555562599617	2823.315338114507	2752.0487967690847	2687.62886910689	2453.858546714005	2635.352795004403	0.978042512177177	0.8592652994394302	0.9154797350547661	1.0784496322646124	0.914092246330889	1.0713234840763664	1.0442809789967746	1.0198364614413606	0.9311309481468895	1.0	11.363780393216595	-7.168089917761535	9.285201537844932	1.0094067401428721	0.9112164441071255	0.3469365411955373	0.056921217503596	0.41138405811457496	38.239508803692026	0.014947876559633335	0.025948967110844393	6.790630226142263e-08	7.168089917761535	-0.09819029603574658	
S(ph)SDEDAAGEPK	ddPTM_K562_Methotrexat_30min_R1	1	SSDEDAAGEPK	11	0	E9PHH9;Q9BUI4	E9PHH9	POLR3C	DNA-directed RNA polymerase III subunit RPC3	1	S(0.786)S(0.214)DEDAAGEPK	105.66	0.0097571	0.0	1544.1	1158.9	2204.0	1618.6	1368.9	1152.5	1020.4	1278.1	1359.4	1716.9	True	False	1476.223212853135	1350.3885270681178	1741.4105194420877	1476.699851038619	1548.9343439821598	1375.2043139245884	1249.2506749513652	1233.1484985660238	1296.20179071421	1405.952772898843	1.0499806546200026	0.9604792942538455	1.2385981613390797	1.0503196689842627	1.1016972787702621	0.9781298066571209	0.8885438394745053	0.8770909822408008	0.9219383578878366	1.0	10.457332418582517	-8.455738221203951	3.4330896785958926	0.9125239019548007	1.0803912629890344	0.5201447464823061	0.07182850051703563	0.19440888759586034	4.484170473570078	0.027674525127570414	0.023159457900268705	3.5015616634592933e-09	8.455738221203951	0.16786736103423372	
S(ph)SDELDAWTDFR	ddPTM_K562_Methotrexat_30min_R1	2	SSDELDAWTDFR	12	0	O43524;O43524-2	O43524	FOXO3	Forkhead box protein O3	1	S(0.973)S(0.027)DELDAWTDFR;S(0.981)S(0.019)DELDAWTDFR	169.65	0.00048204	5948100.0	1122.1299999999999	993.4200000000001	1636.9299999999998	1465.3600000000001	1059.25	925.14	1014.15	1225.4	1176.19	1368.8600000000001	True	False	1072.8025088005236	1157.5657697471815	1293.3607629720207	1336.8941639181699	1198.559941458911	1103.9102116999504	1241.598953353515	1182.3019874366678	1121.509183625237	1120.9461894753983	0.9570508547806332	1.032668455110161	1.1538116415537414	1.1926479401690415	1.069239498481043	0.9848021448884886	1.1076347509014524	1.0547357210697008	1.0005022490420368	1.0	10.13050130853218	-8.00698336630235	24.984658984266513	1.036635369298458	1.0910565052741026	0.12087239244463144	0.06806517191464902	774.0482311712449	2769349.636041449	0.023360218650580772	0.02547584239449979	9.84048794604418e-09	8.00698336630235	0.054421135975644575	
S(ph)SDIVSSVR	ddPTM_K562_Methotrexat_30min_R1	2	SSDIVSSVR	9	0	Q14C86-4;Q14C86-2;Q14C86-6;F8W9S7;Q14C86-3;Q14C86-5;Q14C86;H0Y4E7;H0Y7I9;C9IZ08	Q14C86-4	GAPVD1	GTPase-activating protein and VPS9 domain-containing protein 1	1	S(0.984)S(0.016)DIVSSVR;S(0.963)S(0.037)DIVSSVR	133.91	0.0005702000000000001	45113000.0	2147.98	1572.98	2398.5	2324.9	1608.54	1418.4099999999999	1624.23	1858.44	1840.8899999999999	1793.94	True	False	2053.5573711186307	1832.888208911561	1895.0876274418545	2121.079626640112	1820.0912043750918	1692.4976580596738	1988.5049233401187	1793.0776118261797	1755.3074257083151	1469.0400823659813	1.3978906333251626	1.2476774670161344	1.2900176449846739	1.44385415490092	1.2389663333376995	1.1521112857137294	1.3536083509290684	1.220577731914786	1.194866938471333	1.0	10.520658044641868	-15.999999997605004	0.13047384121599923	0.008692286232723086	1.403287344375129	0.6103996577694474	0.07586936211025455	102.06206201780145	0.8377792193700574	26.14212883810625	0.5878418342291901	1.0000000055146825e-16	15.999999997605004	1.394595058142406	
S(ph)SGPTSLFAVTVAPPGAR	ddPTM_K562_Methotrexat_30min_R1	1	SSGPTSLFAVTVAPPGAR	18	0	A0A1W2PPS1;Q00839-2;Q00839;A0A1W2PP35;A0A1X7SBS1;A0A1W2PP22	A0A1W2PPS1	HNRNPU	Heterogeneous nuclear ribonucleoprotein U	1	S(0.981)S(0.018)GPTSLFAVTVAPPGAR	182.49	4.4824e-12	4843600.0	1452.9	1264.0	1784.6	1619.2	1364.7	1253.5	1255.1	1382.4	1353.9	1667.7	True	False	1389.0322556533397	1472.8545156735695	1410.0368480019736	1477.24724997018	1544.1819703648573	1495.7211344941181	1536.588124393824	1333.7802084482212	1290.9574845137338	1365.663369656592	1.0171117469472906	1.0784901670489497	1.0324922519936517	1.081706724213923	1.1307193300155332	1.0952341314318406	1.1251587752406456	0.9766537186858953	0.9452969986581365	1.0	10.415386193781972	-9.282771374693061	20.06307501440277	0.9707310344688559	1.0808223347921764	0.6521320639498629	0.035500462799775645	42.551475687570544	40017.96380084571	0.020373209692429072	0.009824880781064443	5.214691554636396e-10	9.282771374693061	0.11009130032332048	
S(ph)SGPYGGGGQYFAKPR	ddPTM_K562_Methotrexat_30min_R1	2	SSGPYGGGGQYFAKPR	16	1	F8W6I7;P09651-3;P09651-2;P09651;H0YH80	F8W6I7	HNRNPA1	Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed	1	S(0.906)S(0.094)GPYGGGGQYFAKPR;S(0.986)S(0.014)GPYGGGGQYFAKPR	133.9	2.5029e-05	70341000.0	2759.8999999999996	1932.8400000000001	4248.0	2663.4	2219.8	1781.4099999999999	1780.04	2298.2	2541.8	3206.2	True	False	2638.5781006109496	2252.208957337424	3356.4028523548013	2429.903857195268	2511.7426084970416	2125.6422706016497	2179.259282085878	2217.3710033678385	2423.6322727948946	2625.5261112867797	1.004971190066654	0.857812439059541	1.278373442155491	0.92549216964533	0.9566625895280194	0.8096062200500702	0.8300276553021274	0.8445434969531105	0.923103473386164	1.0	11.358390828237829	-7.754443021413283	2.5305942304476097	0.8724452991298456	1.0321351181575014	0.24643079362549347	0.11250345755095695	0.368389147120196	4.833864772404064	0.03643868288041587	0.04629657925193723	1.7601795807719923e-08	7.754443021413283	0.15968981902765578	
S(ph)SGSPYGGGYGSGGGSGGYGSR	ddPTM_K562_Methotrexat_30min_R1	1	SSGSPYGGGYGSGGGSGGYGSR	22	0	P51991;P51991-2;H7C1J8	P51991	HNRNPA3	Heterogeneous nuclear ribonucleoprotein A3	1	S(0.958)S(0.018)GS(0.024)PYGGGYGSGGGSGGYGSR	246.67	7.297099999999999e-78	13432000.0	686.2	693.37	827.85	708.68	649.11	449.91	549.2	652.28	772.37	743.32	True	False	656.0354696326799	807.9376072251453	654.0955982396246	646.5511246966812	734.4793425540656	536.8487400241316	672.3720802462663	629.3389426841768	736.4626872840478	608.6975450819318	1.0777692056313062	1.327321941336884	1.0745822839676182	1.0621878302624896	1.206640881811349	0.8819630444737062	1.1046078396057335	1.033910762034479	1.2098992237350301	1.0	9.249581737116221	-6.890761015138903	14.966774438649775	1.0715982982575232	1.2025228524283695	0.19624262467553666	0.10591903299410924	1.1154204693159966	146.9035776538648	0.02626616636177331	0.054686189707250366	1.2859941259506196e-07	6.890761015138903	0.13092455417084636	
S(ph)SGT(ph)S(ph)GLLPVEQS(ph)SRWDR	ddPTM_K562_Methotrexat_30min_R1	1	SSGTSGLLPVEQSSRWDR	18	1	Q13370-2;Q13370	Q13370-2	PDE3B	cGMP-inhibited 3,5-cyclic phosphodiesterase B	4	S(0.518)S(0.518)GT(0.982)S(0.982)GLLPVEQS(0.5)S(0.5)RWDR	62.693999999999996	0.020885	11291000.0	153.58	0.0	150.46	173.04	0.0	184.42	0.0	144.1	132.31	199.35	True	False	146.82880709149964	0.0	118.88050215755734	157.86985186193172	0.0	220.0565549448786	0.0	139.03192132334243	126.15893697910636	163.24578325900433	0.8994339955387536	0.0	0.7282301556845887	0.9670684823231042	0.0	1.3480075904670616	0.0	0.8516723589898527	0.7728159004201884	1.0	7.350901916309724	-9.464481669322526	24.9991352913474	0.8616978642821511	0.5615428195980259	0.09681044965593888	0.4356548535253613	616.4530678552787	263897.27502398996	0.2227293360310386	0.10699522739265775	3.4317712429186935e-10	9.464481669322526	-0.30015504468412524	
S(ph)SHQS(ph)QSRS(ph)QSKS(ph)PHDGRSQSWSK	ddPTM_K562_Methotrexat_30min_R1	1	SSHQSQSRSQSKSPHDGRSQSWSK	24	3	A0A087WT36;Q6ZRQ1	A0A087WT36	NSUN4		4	S(0.837)S(0.176)HQS(0.793)QS(0.195)RS(0.794)QS(0.215)KS(0.478)PHDGRS(0.328)QS(0.092)WS(0.092)K	55.206	0.0079766	9642400.0	157.93	0.0	162.17	0.0	208.35	137.8	208.78	167.5	122.03	136.34	True	False	150.98758630004258	0.0	128.13273318417566	0.0	235.7516769440303	164.42789974733904	255.60422963185633	161.6089300600962	116.35685193530607	111.64750483838803	1.352359701352933	0.0	1.1476542478011518	0.0	2.1115713896632577	1.4727413746088789	2.289385956290277	1.4474925372853458	1.0421804956925362	1.0	6.8028071991302905	-7.7656793949123255	24.99995510657579	1.6149867436653473	0.6176925787635209	0.4065819471156241	0.5513347597393814	98.76006444409428	582308.3719671721	0.16089978688911818	0.18892231409049817	1.715223053063614e-08	7.7656793949123255	-0.9972941649018264	
S(ph)SITEPEGPNGPNIQK	ddPTM_K562_Methotrexat_30min_R1	1	SSITEPEGPNGPNIQK	16	0	Q13625-2;Q13625;Q13625-3	Q13625-2	TP53BP2	Apoptosis-stimulating of p53 protein 2	1	S(0.5)S(0.5)IT(0.001)EPEGPNGPNIQK	122.1	0.00033735	11163000.0	1153.4	711.54	1626.2	1485.7	1042.7	728.53	924.62	1023.9	1083.6	1353.1	True	False	1102.6979170421648	829.1098908879526	1284.8828433378956	1355.4509876980574	1179.8333263716843	869.3081117774232	1131.9895718086357	987.8888566479551	1033.2236725157557	1108.0404781929203	0.9951783700542524	0.7482667891701306	1.159599192110187	1.2232865264170074	1.0647926222838442	0.7845454465663197	1.0216139158153983	0.8915638698137472	0.9324782738991794	1.0	10.113794870581232	-8.161137474993955	22.995182260688743	0.925112217507122	1.0391415530485966	0.15499568968456223	0.13094997503579284	45.13569335558245	10333.991725834383	0.04654265980269831	0.04654265750816283	6.900213444775927e-09	8.161137474993955	0.11402933554147454	
S(ph)SKSAEDLTDGSYDDVLNAEQLQK	ddPTM_K562_Methotrexat_30min_R1	1	SSKSAEDLTDGSYDDVLNAEQLQK	24	1	Q8N2F6-6;Q8N2F6-4;Q8N2F6-5;Q8N2F6-2	Q8N2F6-6	ARMC10	Armadillo repeat-containing protein 10	1	S(0.371)S(0.117)KS(0.138)AEDLT(0.355)DGS(0.016)Y(0.004)DDVLNAEQLQK	81.345	0.00066357	27301000.0	2124.2	1242.6	3757.1	2408.5	1227.8	1180.9	878.78	1466.6	1610.4	2698.6	True	False	2030.8227114452638	1447.9185294113759	2968.5360538093773	2197.3505444374855	1389.2772207913622	1409.0922119857228	1075.8687849213647	1415.0188467232072	1535.532855499606	2209.857390031348	0.918983605279821	0.6552090356341213	1.3433156669749025	0.9943404286402006	0.628672794479129	0.63763943245484	0.48684987084442716	0.6403213406920952	0.6948560854770016	1.0	11.109737555033062	-7.760438121999327	24.971099057183512	0.6514914333634095	0.9810051157037021	0.34372970368166067	0.19817150223572375	28.048633315704336	699511.1294419223	0.06015482327326642	0.07326289255823845	1.7360485963473683e-08	7.760438121999327	0.32951368234029255	
S(ph)SLGSLQTPEAVTTR	ddPTM_K562_Methotrexat_30min_R1	3	SSLGSLQTPEAVTTR	15	0	Q7Z2W4-2;Q7Z2W4;C9J6P4;Q7Z2W4-3	Q7Z2W4-2	ZC3HAV1	Zinc finger CCCH-type antiviral protein 1	1	S(0.888)S(0.112)LGSLQTPEAVTTR;S(0.499)S(0.499)LGS(0.003)LQTPEAVTTR;S(0.919)S(0.081)LGSLQTPEAVTTR	222.42	9.7555e-28	103146000.0	3243.51	2497.15	3840.2	3762.9	3232.16	3302.35	2816.49	3442.7	3468.5	4075.9	True	False	3100.9291840692135	2909.7615932074814	3034.1944994380674	3433.0123992791423	3657.2456930713547	3940.482400077105	3448.159578100522	3321.6182896590653	3307.25019206432	3337.715013721475	0.929057505305628	0.8717825162559834	0.9090633822733148	1.0285516843606768	1.0957333619066567	1.1805928258936518	1.0330898725400477	0.9951773222110829	0.9908725515713855	1.0	11.70464506205795	-7.29206671722718	3.8063276700123736	1.0551181945012775	0.8977587420474769	0.5860284557928614	0.05513143405938985	0.16550703818300735	5.264197006048938	0.017562641970981067	0.028619363802301883	5.104265811525364e-08	7.29206671722718	-0.15735945245380067	
S(ph)SLVTSK	ddPTM_K562_Methotrexat_30min_R1	1	SSLVTSK	7	0	A6NMQ3;Q5T5H1;O43768-6;O43768-5;O43768-2;O43768;O43768-9;O43768-7;O43768-3;O43768-4;A0A1W2PRU0	A6NMQ3	ENSA	Alpha-endosulfine	1	S(0.913)S(0.086)LVTSK	84.615	0.027302999999999997	20318000.0	3620.8	2525.9	8111.0	3656.7	3873.0	3315.6	2875.6	4757.9	3234.9	5893.7	True	False	3461.633967423506	2943.2620420410362	6408.611943373304	3336.122788393004	4382.367385669448	3956.2927750528097	3520.5265002843466	4590.561960196605	3084.5102050767987	4826.293818879329	0.7172447632347634	0.6098389680561275	1.3278536665762697	0.691239057046812	0.9080191861769077	0.8197372401109773	0.7294471974567469	0.9511567534988035	0.6391053509860752	1.0	12.236700032403252	-8.462276727117905	24.33964493572101	0.8185328438435134	0.8559637620635726	0.0017679552049079117	0.20566826694978618	1706.9102494701444	685546.1811086916	0.07160980298652035	0.06315379795979635	3.4492388802853355e-09	8.462276727117905	0.03743091822005917	
S(ph)SMHY(ph)SLQDMEDWMQVSKR	ddPTM_K562_Methotrexat_30min_R1	1	SSMHYSLQDMEDWMQVSKR	19	1	E7ESW6;Q6ZQQ6;Q6ZQQ6-2	E7ESW6	WDR87	WD repeat-containing protein 87	2	S(0.491)S(0.509)MHY(0.575)S(0.425)LQDMEDWMQVSKR	46.578	0.029235	4334400.0	1628.0	1282.7	1575.2	1729.3	1232.7	1134.2	1316.9	1665.4	1706.5	2207.7	True	False	1556.4350693121592	1494.6443728279173	1244.5870463816584	1577.6949539114578	1394.8216566782155	1353.368097920406	1612.2483475533652	1606.8269380422946	1627.1651874752085	1807.8641369496047	0.8609247993260821	0.8267459607610886	0.6884295235158769	0.8726844687419323	0.7715301322541236	0.7486005559045679	0.8917972952733603	0.8887985027201665	0.9000483798637169	1.0	10.820070546312307	-9.636907462779511	0.850875594057289	0.9913817178974825	0.7945566545274784	0.5610520369590379	0.05610895665048508	0.42191991615701363	0.6262612551239929	0.05325763891463706	0.02050100860350794	2.3072387508402387e-10	9.636907462779511	-0.19682506337000416	
S(ph)SPAELSSSSQHLLR	ddPTM_K562_Methotrexat_30min_R1	2	SSPAELSSSSQHLLR	15	0	Q9UQC2;Q9UQC2-2;E9PJE2	Q9UQC2	GAB2	GRB2-associated-binding protein 2	1	S(0.5)S(0.5)PAELSSSSQHLLR;S(0.5)S(0.5)PAELSSSSQHLLR	199.65	1.0423e-10	78719000.0	3621.2999999999997	3217.7	4243.6	3774.3	3811.9	3546.0	2901.0	3707.8999999999996	3947.3	4550.2	True	False	3462.1119880221863	3749.3702334516206	3352.9263522252477	3443.4129789787858	4313.23166471298	4231.214314253009	3551.623096858009	3577.4910553422746	3763.7908845712846	3726.114687660505	0.9291479941525695	1.0062412318837446	0.8998451827929191	0.9241296276741237	1.157568144372149	1.1355566505414354	0.9531706333730556	0.9601129742972174	1.0101113894952158	1.0	11.86345636494611														
S(ph)SPAFTK	ddPTM_K562_Methotrexat_30min_R1	1	SSPAFTK	7	0	Q5VVQ6-2;Q5VVQ6	Q5VVQ6-2	YOD1	Ubiquitin thioesterase OTU1	1	S(0.878)S(0.122)PAFTK	113.66	0.010253	15664000.0	4396.7	3677.2	6571.5	5277.2	3240.3	2896.0	2884.9	4063.2	3813.7	5543.1	True	False	4203.426332459932	4284.7947982870655	5192.231954861017	4814.556069381563	3666.4562457486977	3455.6110135580116	3531.912262021947	3920.294952956318	3636.40191941061	4539.19087626279	0.9260298689886116	0.9439556333032697	1.143867287452756	1.0606639378305869	0.8077334365739136	0.7612834771123544	0.7780929153016459	0.8636550124950855	0.8011123608894225	1.0	12.148219440584464	-7.765661620315893	24.99991095539447	0.8219331258061112	1.0222409486073147	0.5271334119073181	0.08446211145545457	80.37601578879736	475906.49836526177	0.026379129444708063	0.030977696300242115	1.7152932543273333e-08	7.765661620315893	0.20030782280120352	
S(ph)SPGAVAGLSNAPGTPR	ddPTM_K562_Methotrexat_30min_R1	2	SSPGAVAGLSNAPGTPR	17	0	V9GYB2;U3KPY3;Q9BWG4-2;Q9BWG4	V9GYB2	SSBP4	Single-stranded DNA-binding protein 4	1	S(0.85)S(0.15)PGAVAGLSNAPGTPR;S(0.855)S(0.145)PGAVAGLSNAPGTPR	204.81	2.5574e-16	102607000.0	1931.54	1805.04	2614.0	1697.93	2056.8	1854.96	1446.83	2415.1	2458.8	2680.03	True	False	1846.631814360693	2103.2921795659963	2065.3571224236002	1549.0751131063896	2327.305251444597	2213.404767164907	1771.318457506746	2330.1595641082877	2344.4909246786083	2194.650596978325	0.8414240594394401	0.9583722267507573	0.9410869890939628	0.7058413376777208	1.060444543951058	1.0085454013556432	0.8071072725405865	1.0617451212127051	1.0682752543418932	1.0	11.099775556025854	-9.288294132819265	24.527055713480774	1.0487576895538837	0.9093367641981855	0.2996749208748609	0.09771836624582056	792.339463181253	723656.1750864494	0.053699741401423105	0.02580885536515578	5.148798159566056e-10	9.288294132819265	-0.13942092535569817	
S(ph)SPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR	ddPTM_K562_Methotrexat_30min_R1	2	SSPGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR	36	1	P40222	P40222	TXLNA	Alpha-taxilin	1	S(0.5)S(0.5)PGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR;S(0.692)S(0.308)PGQPEAGPEGAQERPSQAAPAVEAEGPGSSQAPR	109.26	7.7212e-18	177825000.0	476.53	433.51	533.59	440.52	434.97	511.94	457.48	538.16	584.66	605.66	True	False	455.5823117809112	505.1401590899125	421.5967509387945	401.90029555142274	492.17617912332577	610.8651596273788	560.0815354534994	519.2326077680083	557.4792842128662	495.9691050346051	0.9185699414666645	1.0184911801203171	0.8500463973645669	0.8103333281684574	0.992352495603502	1.2316597010306864	1.1292669841086596	1.0469051448915956	1.1240201830192011	1.0	8.954106444657889	-8.005466679532793	23.305271910306157	1.1108744888415591	0.9039715723161831	0.6282824266000578	0.07515935611508645	67.00443204889172	285654.41718888097	0.024455011961217	0.026862359251045225	9.874913963513746e-09	8.005466679532793	-0.20690291652537607	
S(ph)SPGQTPEEGAQALAEFAALHGPALR	ddPTM_K562_Methotrexat_30min_R1	5	SSPGQTPEEGAQALAEFAALHGPALR	26	0	Q14166	Q14166	TTLL12	Tubulin--tyrosine ligase-like protein 12	1	S(0.481)S(0.481)PGQT(0.038)PEEGAQALAEFAALHGPALR;S(0.499)S(0.499)PGQT(0.002)PEEGAQALAEFAALHGPALR;S(0.408)S(0.408)PGQT(0.184)PEEGAQALAEFAALHGPALR;S(0.496)S(0.496)PGQT(0.007)PEEGAQALAEFAALHGPALR;S(0.493)S(0.493)PGQT(0.015)PEEGAQALAEFAALHGPALR	198.83	3.5090000000000004e-31	865308400.0	10592.0	8638.6	12354.0	9794.7	8472.1	8217.4	7582.68	11031.0	10826.5	12546.2	True	False	10126.388362502692	10065.981818906408	9761.064227399067	8936.013858252792	9586.32964836822	9805.296250970856	9283.289012093512	10643.033477569674	10323.178378084005	10273.961604836315	0.9856361890369383	0.9797566124996999	0.9500779351564046	0.8697729465960138	0.9330704179248245	0.9543831900593397	0.9035744310864021	1.035923034066978	1.0047904377240928	1.0	13.326704966813404	-9.26829508522223	24.998715935235406	1.015267555374577	0.9390721639372388	0.5105264582715768	0.03323702497246555	487.2871496572929	1776834.8117829706	0.01902868085994607	0.009466587879011211	5.391441717648917e-10	9.26829508522223	-0.07619539143733811	
S(ph)SPNVANQPPSPGGK	ddPTM_K562_Methotrexat_30min_R1	1	SSPNVANQPPSPGGK	15	0	A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6	A8MQ02	MLLT4	Afadin	1	S(0.661)S(0.001)PNVANQPPS(0.337)PGGK	191.63	1.3868e-07	85969000.0	7839.2	6127.7	11653.0	8977.5	5739.0	5449.6	5235.6	6808.1	7135.5	9203.3	True	False	7494.598154393044	7140.1982719089665	9207.194547667255	8190.456513467939	6493.7790927851665	6502.658073026847	6409.816575632467	6568.655264132182	6803.772162454945	7536.493188199621	0.994441044029314	0.9474165362597078	1.2216815324776729	1.0867728940951304	0.861644657617803	0.862822789146613	0.8505038637424546	0.8715798051031419	0.9027769272196855	1.0	12.879677662681834	-7.761638751234889	24.999998665177777	0.8816445134184311	1.065716742371461	0.5364146898730383	0.07753931112952937	4.096089201786004	513646.9272773173	0.024396262966146387	0.02945430800403186	1.7312558294756427e-08	7.761638751234889	0.18407222895303	
S(ph)SPPAPPLPPGSGSPGTPQALPR	ddPTM_K562_Methotrexat_30min_R1	2	SSPPAPPLPPGSGSPGTPQALPR	23	0	Q9Y3L3;A0A2R8Y5V0	Q9Y3L3	SH3BP1	SH3 domain-binding protein 1	1	S(0.5)S(0.5)PPAPPLPPGSGSPGTPQALPR;S(0.5)S(0.5)PPAPPLPPGSGSPGTPQALPR	216.16	4.0755e-42	28533300.0	1147.06	911.9200000000001	1110.07	1077.29	766.63	804.38	649.89	1101.99	933.79	1160.48	True	False	1096.636615850863	1062.599280010318	877.0814770041184	982.8456583006271	867.4552824362947	959.8150507892932	795.6443758762674	1063.2323870861221	890.3783067169504	950.3058267188835	1.1539828390163778	1.1181655948371374	0.9229465424119448	1.034241431197043	0.9128169669666801	1.01000648823047	0.8372508654644211	1.1188318088684561	0.9369387008718608	1.0	9.892248064994515	-6.675931623988268	5.856379462980482	0.9727932159463333	1.1432554517630547	0.4494005240572114	0.07303016353431178	0.16797203466153862	8.884044754176458	0.01750836457181728	0.04753786755391048	2.1089601618276474e-07	6.675931623988268	0.17046223581672137	
S(ph)SPPLPPPAEER	ddPTM_K562_Methotrexat_30min_R1	1	SSPPLPPPAEER	12	0	I3L2J0;A0A0A0MQR4;Q96RK0	I3L2J0	CIC	Protein capicua homolog	1	S(0.98)S(0.02)PPLPPPAEER	138.2	5.620299999999999e-06	20567000.0	959.5	1062.6	1336.8	1081.1	932.25	919.44	1054.8	1032.5	1058.5	1305.6	True	False	917.3215288728605	1238.1765888882405	1056.223948452896	986.3216415160332	1054.8572154119133	1097.10876737078	1291.3657506259308	996.186389773429	1009.2905660372156	1069.1431884773317	0.8579968883113825	1.1581017418739254	0.9879162677519039	0.9225346540539134	0.9866379235079219	1.026157000479306	1.2078510760238648	0.9317614333700172	0.944018141737069	1.0	10.062239368283889														
S(ph)SPQHSLSNPLPR	ddPTM_K562_Methotrexat_30min_R1	3	SSPQHSLSNPLPR	13	0	Q86UE8-2;Q86UE8	Q86UE8-2	TLK2	Serine/threonine-protein kinase tousled-like 2	1	S(0.986)S(0.014)PQHSLSNPLPR;S(0.894)S(0.106)PQHSLSNPLPR;S(0.98)S(0.02)PQHSLSNPLPR	181.76	1.667e-08	157500000.0	4108.0	3590.46	5177.1	4347.9	3343.87	3606.94	3480.07	3674.8199999999997	4192.4	4876.3	True	False	3927.417238780312	4183.722487614974	4090.4974592575472	3966.7263575502366	3783.6475161163166	4303.930106782781	4260.564284964717	3545.5744976921965	3997.4962390688925	3993.1548176868987	0.9835374329551624	1.0477235866448236	1.0243773772906295	0.993381558856771	0.9475333887274767	1.0778270072874119	1.0669669670941333	0.8879131061955743	1.0010872158932491	1.0	11.963313292114956	-9.247566215790563	24.994259633991916	0.958375111344068	1.019803261902249	0.2349900618139742	0.04706351324524367	1062.3308791899215	1913928.457446702	0.022476731837333307	0.01289296050811133	5.655015299157585e-10	9.247566215790563	0.06142815055818096	
S(ph)SPQLDPLRKS(ph)PTMEQAVQTASAHLPAPAAVGR	ddPTM_K562_Methotrexat_30min_R1	1	SSPQLDPLRKSPTMEQAVQTASAHLPAPAAVGR	33	2	Q8ND56;Q8ND56-2;Q8ND56-3	Q8ND56	LSM14A	Protein LSM14 homolog A	2	S(0.496)S(0.496)PQLDPLRKS(0.5)PT(0.5)MEQAVQT(0.006)AS(0.002)AHLPAPAAVGR	54.711000000000006	0.00086662	20007000.0	1677.2	1127.5	2131.5	1663.3	1347.8	1192.8	1088.8	1800.6	1915.0	2076.0	True	False	1603.4722962225758	1313.8002107768598	1684.1272786709656	1517.4810714398473	1525.0593241428567	1423.2917185676774	1332.991116118235	1737.2718774102034	1825.9720679841928	1700.016283148699	0.9432099634085219	0.7728162511146623	0.9906536163004837	0.8926273745032797	0.8970851275131352	0.8372224035004631	0.7841049108361037	1.0219148455404798	1.074090928471699	1.0	10.731332849557637	-9.373702300260515	6.881001951909149	1.0398004104262626	0.8749908873032617	0.5566051024572964	0.0646621216192139	0.1860496523098589	10.078111906847663	0.035524059302108744	0.016835179993660385	4.2295844404193243e-10	9.373702300260515	-0.1648095231230009	
S(ph)SPSARPPDVPGQQPQAAK	ddPTM_K562_Methotrexat_30min_R1	1	SSPSARPPDVPGQQPQAAK	19	1	A0A0A6YYC7;Q96JP5-2;Q96JP5	A0A0A6YYC7	ZFP91-CNTF;ZFP91	E3 ubiquitin-protein ligase ZFP91	1	S(0.499)S(0.499)PS(0.003)ARPPDVPGQQPQAAK	145.88	2.6594e-12	25025000.0	2002.7	1297.5	3070.4	2614.3	1680.5	1426.7	1332.1	1986.8	1940.9	3039.6	True	False	1914.6637059652699	1511.8898212709314	2425.9649994986307	2385.1083779625974	1901.515205684872	1702.3895832331539	1630.857334479336	1916.9231178710395	1850.6679826373472	2489.0989856737883	0.7692195919026413	0.6074044583894559	0.974635807358996	0.9582215860800566	0.7639371582364531	0.6839380808201665	0.6551998710641352	0.7701273147046568	0.7435091948086505	1.0	11.28140788874605	-12.345665660103185	5.278934118911743	1.0000806987183581	0.7703542196357176	0.27642529391389636	0.11183433510838078	0.00011572693575541858	1.4344540056465492e-05	0.1179780664344009	0.028603860398950878	4.5116389763178473e-13	12.345665660103185	-0.22972647908264054	
S(ph)SPSGITHVIASNAR	ddPTM_K562_Methotrexat_30min_R1	1	SSPSGITHVIASNAR	15	0	Q9BQI6	Q9BQI6	ANKRD32	Ankyrin repeat domain-containing protein 32	1	S(0.98)S(0.02)PSGITHVIASNAR	120.29	0.0007041	13618000.0	867.49	627.53	975.14	1023.5	520.89	727.62	714.59	818.72	797.84	949.72	True	False	829.3561783031969	731.2186663137941	770.4714400765685	933.771344086264	589.396165122995	868.2222671564498	874.8549978572095	789.9251535450867	760.7485925433467	777.7165050250392	1.0663990965146035	0.9402123544880302	0.9906841826016828	1.2006577436031147	0.7578547726771195	1.1163737191465375	1.1249021876281806	1.0156980704937648	0.9781823937488042	1.0	9.603100546361958														
S(ph)SPSLSDSYSHLSGRPIR	ddPTM_K562_Methotrexat_30min_R1	1	SSPSLSDSYSHLSGRPIR	18	1	O75420	O75420	GIGYF1	PERQ amino acid-rich with GYF domain-containing protein 1	1	S(0.968)S(0.032)PSLSDSYSHLSGRPIR	126.25	2.6361e-05	16987000.0	840.32	762.67	712.02	647.07	781.28	688.28	760.48	907.49	965.39	987.31	True	False	803.3805389707579	888.6882543265516	562.5767323290173	590.3423777409859	884.0320142204561	821.2803689266946	931.0369985172623	875.5730623297717	920.5092296142351	808.4985917704922	0.9936696824807987	1.0991834288547813	0.6958289575954085	0.7301711886080388	1.0934243092304674	1.015809275719593	1.151562919211064	1.0829617654774095	1.1385415373432577	1.0	9.65910145061343	-7.792429558798483	24.7739815420142	1.0848618016905933	0.8822551319369274	0.41374507982305087	0.11693272716243429	194.08594895474147	155153.86243738674	0.0393584583528864	0.044633149277745865	1.6127625911538427e-08	7.792429558798483	-0.20260666975366592	
S(ph)SPVNNHHSPGQTPTLGQPEAR	ddPTM_K562_Methotrexat_30min_R1	2	SSPVNNHHSPGQTPTLGQPEAR	22	0	Q5SW79-2;H0Y2V6;Q5SW79-3;Q5SW79;E7EWM2;E7EMW0;Q96L14	Q5SW79-2	CEP170;CEP170P1	Centrosomal protein of 170 kDa;Cep170-like protein	1	S(0.5)S(0.5)PVNNHHSPGQTPTLGQPEAR;S(0.498)S(0.498)PVNNHHS(0.004)PGQTPTLGQPEAR	111.4	1.4448e-05	39160000.0	1399.47	1017.8599999999999	1350.0	1296.19	895.03	1130.4	1296.32	1430.58	1284.32	1471.6399999999999	True	False	1337.950974478063	1186.0440643382126	1066.653448841569	1182.555035164801	1012.7421330223926	1348.833801700958	1587.0527586759654	1380.265690539537	1224.6122435266102	1205.1117355168349	1.1102298111006756	0.9841776736408224	0.885107511117311	0.9812824822070462	0.8403719781121035	1.1192603656145506	1.3169341164828403	1.1453425021602532	1.0161814937445715	1.0	10.234951201078085	-8.399758318701869	7.456507450007515	1.1435757835142544	0.9590322900260322	0.35597681848040363	0.10511910627194836	0.2733860502280977	15.478746093055147	0.037875565866688526	0.033319491668273	3.9832877556621314e-09	8.399758318701869	-0.1845434934882222	
S(ph)SSAGPEGPQLDVPREFLPR	ddPTM_K562_Methotrexat_30min_R1	1	SSSAGPEGPQLDVPREFLPR	20	1	O75081;O75081-2;O75081-4	O75081	CBFA2T3	Protein CBFA2T3	1	S(0.458)S(0.083)S(0.458)AGPEGPQLDVPREFLPR	112.64	0.00010755	7200500.0	746.75	704.03	987.35	1192.0	856.54	700.41	804.97	710.71	1116.0	1214.6	True	False	713.9237641332035	820.3589910361258	780.1187279360911	1087.4992106993911	969.1900233724011	835.75431975351	985.5050135393975	685.7139264657371	1064.117403587655	994.6241702853602	0.7177824403044387	0.8247929374175199	0.78433518030461	1.0933770193694217	0.974428384436242	0.8402714761232175	0.9908315552563474	0.6894201316955771	1.0698688362684339	1.0	9.958007680162465	-7.060507153637568	24.911022627863307	0.9364330365460992	0.7796065717184419	0.3321311180504305	0.11269719706846723	281.5805100439646	115927.09531437355	0.02997882888764822	0.05192496174864958	8.699471033010309e-08	7.060507153637568	-0.15682646482765727	
S(ph)SSEDAESLAPR	ddPTM_K562_Methotrexat_30min_R1	1	SSSEDAESLAPR	12	0	H0YA82;Q4G0J3;Q4G0J3-3	H0YA82	LARP7	La-related protein 7	1	S(0.934)S(0.039)S(0.027)EDAESLAPR	99.73200000000001	0.0081208	85045000.0	1226.9	1114.3	1946.8	1699.3	1254.8	1266.3	1222.5	1258.7	1369.9	1621.3	True	False	1172.9669450485792	1298.4191351384968	1538.1932845961226	1550.3250073334523	1419.8281940454488	1510.9945533385733	1496.6767445394407	1214.4308075620484	1306.2136480060299	1327.6668592817834	0.8834798706078338	0.977970585061445	1.158568713109421	1.1677063387513629	1.069416009083424	1.138082601652016	1.127298413812246	0.9147104931270248	0.9838414199121014	1.0	10.374677472946209	-12.075558213802601	5.679922512272769	0.9999997000087432	1.053440484998463	0.0161632826899053	0.09780362230293406	4.032378995891768e-07	6.579993212231329e-08	0.10279109166241274	0.02493036161186028	8.403143619361031e-13	12.075558213802601	0.053440784989719936	
S(ph)SSFGNFDRFR	ddPTM_K562_Methotrexat_30min_R1	1	SSSFGNFDRFR	11	1	Q9NSI8;A0A2R8Y4K8;Q9NSI8-3	Q9NSI8	SAMSN1	SAM domain-containing protein SAMSN-1	1	S(0.454)S(0.454)S(0.092)FGNFDRFR	89.663	0.01242	25600000.0	1412.6	1033.6	1397.6	1901.6	1275.9	1200.0	1411.0	1762.5	1636.7	2131.2	True	False	1350.503795399482	1204.3848318039572	1104.2628593340562	1734.8896804244637	1443.7032138847524	1431.8830166676846	1727.4526679305934	1700.5118760054909	1560.610174240067	1745.2190282497615	0.7738305470768732	0.6901052603189904	0.6327359726541001	0.9940813458608362	0.8272332529703208	0.8204603511019966	0.9898199824597457	0.9743830708234333	0.8942202376770815	1.0	10.769192393383655	-7.260279658054626	24.997402209763177	0.9213538092923113	0.6980120545237654	0.6934534739081528	0.06987172753703506	61.475671858356336	1325075.1071596926	0.020093366395385007	0.0324460082522132	5.4918711835870384e-08	7.260279658054626	-0.2233417547685459	
S(ph)SSGTGLSSPPLATQTVVPLQHCK	ddPTM_K562_Methotrexat_30min_R1	2	SSSGTGLSSPPLATQTVVPLQHCK	24	0	Q5VVU5;F8WB89;Q9GZU3-2;Q9GZU3	Q5VVU5	TMEM39B	Transmembrane protein 39B	1	S(0.263)S(0.263)S(0.263)GT(0.183)GLS(0.014)S(0.014)PPLATQTVVPLQHCK;S(0.328)S(0.328)S(0.328)GT(0.015)GLSSPPLATQTVVPLQHCK	110.55	1.0197e-07	32078000.0	2968.34	2376.5299999999997	3834.3	3193.87	2059.91	1987.56	2038.6	2482.0699999999997	2771.1	3223.0	True	False	2837.855327789961	2769.2111883969205	3029.5328288097976	2913.8683759030723	2330.824270956457	2371.6278405066855	2495.807943900287	2394.77419124933	2642.272165843865	2639.283468491451	1.0752370337135513	1.0492284066704411	1.147861859090643	1.1040376718490823	0.8831276741519161	0.8985877677861747	0.9456384559278995	0.9073577051646232	1.0011323896762487	1.0	11.3659305942593	-7.752548026514529	24.999520232889417	0.9329557939740256	1.094727551194131	0.7510046848536999	0.04356958800056409	91.54196751844329	257384.25698925686	0.013018020825562188	0.0165512908120538	1.767876706037458e-08	7.752548026514529	0.1617717572201054	
S(ph)SSLEGFHNHFK	ddPTM_K562_Methotrexat_30min_R1	1	SSSLEGFHNHFK	12	0	B7Z3B9;Q13480;Q13480-2	B7Z3B9	GAB1	GRB2-associated-binding protein 1	1	S(0.466)S(0.466)S(0.068)LEGFHNHFK	76.868	0.030075	12417000.0	1872.0	1841.3	3010.1	2045.4	1492.2	1420.7	1131.2	1811.2	1833.2	2529.2	True	False	1789.7091214695097	2145.5435282513813	2378.3211454503744	1866.082957688367	1688.4504551758203	1695.2301681498157	1384.900395438048	1747.499069402068	1747.9749321298298	2071.137371550909	0.8641189841161235	1.0359252639262433	1.1483164652035804	0.9009942958496311	0.8152286170721138	0.8185020421317556	0.668666605344969	0.843738852577174	0.8439686117106329	1.0	11.016207530486389	-7.508391306379136	5.259631446143555	0.8176144585654622	1.020267815919419	0.40468313408595014	0.0990215649245957	0.16019900041032487	13.556500766221735	0.02889014954306806	0.040722792519939065	3.101763589345016e-08	7.508391306379136	0.20265335735395673	
S(ph)SSLPAYGR	ddPTM_K562_Methotrexat_30min_R1	1	SSSLPAYGR	9	0	Q08495-3;Q08495-2;Q08495;Q08495-4	Q08495-3	DMTN	Dematin	1	S(0.866)S(0.009)S(0.124)LPAYGR	156.16	9.0738e-11	46516000.0	1956.2	1542.8	1953.3	1903.9	1469.3	1566.2	1547.4	1885.1	1904.9	1795.5	True	False	1870.207790287743	1797.7214768838487	1543.3290234238789	1736.988042995444	1662.5387037862436	1868.8459839207721	1894.4438400820698	1818.7999645151476	1816.341614779682	1470.3175512492721	1.2719754237434624	1.222675656259693	1.049656941191086	1.1813693181582388	1.1307344473808727	1.2710492249329988	1.2884589716503307	1.2370116666088788	1.2353396810344857	1.0	10.521912058864414	-8.256927925384971	24.96332921485134	1.2263155789410798	1.167940961226795	0.011787688075167613	0.0930872151623188	1040.5800334304313	5757878.916724517	0.03062607405488068	0.029593356950143923	5.534419496773386e-09	8.256927925384971	-0.05837461771428476	
S(ph)SSPATEQSWMENDFDELREEGFRR	ddPTM_K562_Methotrexat_30min_R1	2	SSSPATEQSWMENDFDELREEGFRR	25	2	Q9UN81	Q9UN81	L1RE1	LINE-1 retrotransposable element ORF1 protein	1	S(0.47)S(0.108)S(0.391)PAT(0.031)EQSWMENDFDELREEGFRR;S(0.374)S(0.296)S(0.261)PAT(0.065)EQS(0.003)WMENDFDELREEGFRR	65.954	0.0016894000000000002	50090000.0	1682.29	1672.15	1866.51	1814.1399999999999	1584.3899999999999	1566.2	1487.99	1774.58	1757.15	1898.58	True	False	1608.3385459171698	1948.4443658097796	1474.7550583683537	1655.0971628340549	1792.7650560756044	1868.8459839207721	1821.7096352615479	1712.1670155584814	1675.4604800305092	1554.7287643836496	1.0344817583372963	1.253237484534618	0.9485609915714138	1.064556854384948	1.1531047068433966	1.2020398842119897	1.171721831482123	1.1012641270821577	1.07765451981891	1.0	10.602447196586882	-5.990953406663424	18.840616251406495	1.1130997128020075	0.9180919317560676	0.057323506785295186	0.08729449539132625	3080.4638110863125	2814.235496222307	0.021062625249048384	15561.538830191961	1.0210490212007484e-06	5.990953406663424	-0.19500778104593985	
S(ph)SSPCRTPEPDNDAHLR	ddPTM_K562_Methotrexat_30min_R1	1	SSSPCRTPEPDNDAHLR	17	1	Q9Y2K6	Q9Y2K6	USP20	Ubiquitin carboxyl-terminal hydrolase 20	1	S(0.327)S(0.327)S(0.327)PCRT(0.019)PEPDNDAHLR	155.37	5.0766999999999996e-11	31996000.0	3440.4	3086.8	4541.9	4148.4	3511.3	3198.7	2842.1	3575.0	3763.0	3836.1	True	False	3289.1641354186418	3596.841233371182	3588.61725873594	3784.716212806503	3973.0974958174907	3816.8035045124325	3479.5132725198723	3449.265223670711	3588.058951344399	3141.3451174309826	1.0470559624816222	1.145000341863968	1.1423823631549088	1.204807517583956	1.2647758674369156	1.2150220245885766	1.1076507491050351	1.0980217374178702	1.1422046343888324	1.0	11.617166735087451	-10.276163358079284	0.8214877165374421	1.0018439012082498	1.1666857689641663	0.3856565132363098	0.05884808453750356	1.1494060926473832	1.5340196686273124	0.06381501965408468	0.02231644768658551	5.294642506356254e-11	10.276163358079284	0.16484186775591647	
S(ph)SSPELVTHLK	ddPTM_K562_Methotrexat_30min_R1	1	SSSPELVTHLK	11	0	E9PNR6;H0YE29;Q07960	E9PNR6	ARHGAP1	Rho GTPase-activating protein 1	1	S(0.379)S(0.379)S(0.241)PELVTHLK	135.94	7.9771e-05	30957000.0	6828.6	5016.5	9763.4	6346.3	5482.3	4715.8	4498.9	6766.6	6798.5	7918.8	True	False	6528.422920334772	5845.391359079485	7714.195764755387	5789.929732266398	6203.3185433657645	5627.061608334556	5507.892847450706	6528.614842654613	6482.439218898451	6484.628585259108	1.0067535610559435	0.9014226924834614	1.1896125835628177	0.8928699086063459	0.9566189430597738	0.8677538789385751	0.8493767646108948	1.0067831575574728	0.99966237598162	1.0	12.662808229447483	-5.887693355522158	17.82837195026002	0.9606909027834885	5.637733747874971	0.01936247352010889	0.09314007162213928	978.4969762233673	154760.24732181733	0.022895840879997967	687.6453308063951	1.2951099634646786e-06	5.887693355522158	4.677042845091482	
S(ph)SSPELVTHLKWDDPYYDIAR	ddPTM_K562_Methotrexat_30min_R1	1	SSSPELVTHLKWDDPYYDIAR	21	1	E9PNR6;H0YE29;Q07960	E9PNR6	ARHGAP1	Rho GTPase-activating protein 1	1	S(0.353)S(0.353)S(0.294)PELVTHLKWDDPYYDIAR	78.67399999999999	0.0028947	4413500.0	1742.8	994.85	1978.7	1857.1	1124.8	832.94	1248.5	1523.9	1432.4	2315.9	True	False	1666.188598769798	1159.2320529413385	1563.3979105354165	1694.2909263337579	1272.7309154146642	993.8938665859835	1528.5079063864957	1470.3035732452581	1365.8080366478123	1896.4680684701677	0.8785745599786817	0.6112584083086943	0.8243734426789319	0.8933928044992073	0.6711059029015678	0.5240762463181002	0.8059760835411819	0.7752851723105015	0.7201850953122425	1.0	10.889099365312132	-12.259419020726988	3.5359392034563624	1.0006064245919863	0.7417103297381912	0.3210316177525995	0.11120276853109387	207273430.0317815	347079542.2106713	1416553.1715810038	0.028342719939559217	5.502765164218124e-13	12.259419020726988	-0.25889609485379517	
S(ph)SSPGKPQAVSSLNSSHSR	ddPTM_K562_Methotrexat_30min_R1	1	SSSPGKPQAVSSLNSSHSR	19	1	Q9UHB7;Q9UHB7-3;Q9UHB7-2	Q9UHB7	AFF4	AF4/FMR2 family member 4	1	S(0.333)S(0.333)S(0.333)PGKPQAVSSLNSSHSR	80.596	0.0051985	38751000.0	4755.5	3196.8	6191.9	5174.1	3403.3	3256.5	3014.2	4236.3	3991.7	5612.3	True	False	4546.453914074923	3725.0168636908766	4892.304807320081	4720.4946863084915	3850.8936028011444	3885.772536481928	3690.2110784382658	4087.3069278423045	3806.126738262407	4595.858085701079	0.9892502834715751	0.8105160764820789	1.0645030190425864	1.027119331859961	0.8379052466355054	0.8454944569701981	0.8029427823107682	0.8893457656055546	0.8281645488802768	1.0	12.166118534731341	-7.774548986185036	24.997741860196903	0.8574670547318339	0.9677989487054431	0.29005442060468467	0.07984866728706741	285.3958397678538	544198.3114926034	0.024643675076684923	0.028106812688550135	1.680548357802017e-08	7.774548986185036	0.11033189397360921	
S(ph)SSPIPLTPSK	ddPTM_K562_Methotrexat_30min_R1	1	SSSPIPLTPSK	11	0	A0A3B3IRN2;A0A3F2YNX2;A0A3B3ITF3;A0A3B3ITL5;A0A3B3IT59;Q8N5Y2-4;Q8N5Y2-6;Q8N5Y2-2;Q8N5Y2-3;Q8N5Y2	A0A3B3IRN2	MSL3	Male-specific lethal 3 homolog	1	S(0.515)S(0.019)S(0.465)PIPLTPSK	88.155	0.019118	12952000.0	5751.5	4411.4	8428.3	5785.2	4675.2	4543.0	3815.4	5276.8	5101.8	6861.6	True	False	5498.670946651647	5140.308869020876	6659.3150095343635	5278.020498102449	5290.070746574181	5420.870453934407	4671.100573509839	5091.211953081286	4864.618431562278	5618.897749736562	0.9786031338458593	0.9148251308295965	1.1851639424914933	0.9393337863017538	0.9414783792465705	0.9647569141454052	0.8313197323672316	0.906087311042452	0.8657602697593761	1.0	12.456071431664647	-7.501911684654127	24.844783237936458	0.9141447024844993	1.0229249578669053	0.28067557625310446	0.07740626160159143	921.4867950422982	1091910.0823511495	0.02192327901418049	0.03211478216118026	3.148388485137724e-08	7.501911684654127	0.10878025538240599	
S(ph)SSQRSPSPGPNHTSNS(ph)SNASNATVVPQNSSAR	ddPTM_K562_Methotrexat_30min_R1	1	SSSQRSPSPGPNHTSNSSNASNATVVPQNSSAR	33	1	A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9	A0A0A0MRT2	WAC	WW domain-containing adapter protein with coiled-coil	2	S(0.243)S(0.243)S(0.243)QRS(0.243)PS(0.198)PGPNHT(0.198)S(0.224)NS(0.257)S(0.065)NAS(0.084)NAT(0.001)VVPQNSSAR	49.942	0.0064414	48323000.0	1631.6	1465.6	1631.1	1768.7	1306.3	1420.4	1334.7	1425.3	1531.6	1660.3	True	False	1559.8768176226765	1707.7654890594818	1288.7544003003582	1613.6408170839034	1478.1013467337984	1694.8721973956485	1634.0404506640418	1375.1713911322688	1460.3962503000469	1359.603581364058	1.1473026689571448	1.2560760448616362	0.9478898246262204	1.1868465479216932	1.0871561144689355	1.2465929191619394	1.201850651955953	1.011450256517118	1.0741338654277932	1.0	10.408970351896558	-9.270303346922532	24.61845383389029	1.0320940353799457	1.1517579143955878	0.3104380669396999	0.0852029521168378	716.3747717247683	1989617.914350724	0.04559296117792377	0.022429859004306007	5.366568202446773e-10	9.270303346922532	0.11966387901564213	
S(ph)SSQRSPSPGPNHTSNSSNASNATVVPQNSSAR	ddPTM_K562_Methotrexat_30min_R1	1	SSSQRSPSPGPNHTSNSSNASNATVVPQNSSAR	33	1	A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9	A0A0A0MRT2	WAC	WW domain-containing adapter protein with coiled-coil	1	S(0.235)S(0.235)S(0.235)QRS(0.235)PS(0.051)PGPNHT(0.004)S(0.004)NS(0.001)SNASNATVVPQNSSAR	67.35300000000001	5.4326e-05	21215000.0	868.83	867.77	1049.5	1006.5	633.39	602.15	638.36	936.67	727.04	853.71	True	False	830.6372735076679	1011.1542429320041	829.2242922660938	918.2617076920608	716.69188701502	718.5069654053715	781.5284798725537	903.7267851903905	693.2400690899366	699.0948463809609	1.1881610597012255	1.446376336725262	1.1861399015581082	1.3135008968320563	1.0251711777381203	1.0277675041160756	1.1179148064362527	1.2927098373972543	0.9916252031876175	1.0	9.449344389468225	-7.754369526190923	24.99762234281337	1.090197883020685	1.2882179505530076	0.47304134328598857	0.10669687081827091	155.1077983263205	548427.8051359575	0.03160832388407851	0.0399263193662291	1.7604774794141055e-08	7.754369526190923	0.19802006753232249	
S(ph)SSSPELQTLQDILGDPGDKADVGR	ddPTM_K562_Methotrexat_30min_R1	1	SSSSPELQTLQDILGDPGDKADVGR	25	1	P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4;A0A2R8Y670	P49815	TSC2	Tuberin	1	S(0.248)S(0.248)S(0.217)S(0.217)PELQT(0.071)LQDILGDPGDKADVGR	73.389	0.00061922	7762100.0	1269.4	933.63	2101.7	1646.9	1285.1	795.03	1104.7	1319.8	1604.8	2097.6	True	False	1213.5986959366423	1087.8964885034134	1660.5818914298702	1502.5188339772042	1454.113175141701	948.6582956177579	1352.457095863166	1273.3818859302387	1530.1931982773021	1717.704313840418	0.7065236351553988	0.633343282506586	0.9667449036773772	0.8747249581145282	0.8465445207450264	0.5522826530584659	0.7873631596344788	0.7413277568612668	0.890836208506759	1.0	10.746265996534147	-9.97474146619559	3.425297559444207	0.9992255236241193	0.7664508269894308	0.31524108761418324	0.11263861802107794	0.2683162299699558	7.359870240018602	0.11461733333768498	0.0304316906268012	1.059884482496976e-10	9.97474146619559	-0.23277469663468853	
S(ph)SSSQTLTQFDSNIAPADPDTAIVHPVPIR	ddPTM_K562_Methotrexat_30min_R1	1	SSSSQTLTQFDSNIAPADPDTAIVHPVPIR	30	0	Q96D71-3;Q96D71;H0YE73	Q96D71-3	REPS1	RalBP1-associated Eps domain-containing protein 1	1	S(0.398)S(0.398)S(0.15)S(0.046)QT(0.008)LTQFDSNIAPADPDTAIVHPVPIR	135.6	2.2661999999999997e-19	87150000.0	427.68	376.07	271.51	406.58	395.09	198.68	225.26	443.8	406.56	359.34	True	False	408.8796992895725	438.2091754029743	214.5237614036848	370.9357626561732	447.0512601095128	237.07209812627963	275.78028914106665	428.1913024517655	387.65911433924504	294.2600439242065	1.3895182432409645	1.489190205911358	0.7290278304279066	1.2605712882708475	1.5192387459327001	0.80565507625406	0.9371992386846114	1.4551459203956896	1.317403168875675	1.0	8.200947849124573	-8.246836469701062	24.90890871513672	1.1211596733409	1.2578570818610535	0.09183254159942356	0.26776116930184085	2772.0289104882672	4728390.912115911	0.09456048211896617	0.09417985688330555	5.664525423022406e-09	8.246836469701062	0.13669740852015355	
S(ph)STDSLPGPISR	ddPTM_K562_Methotrexat_30min_R1	2	SSTDSLPGPISR	12	0	Q9HCD5	Q9HCD5	NCOA5	Nuclear receptor coactivator 5	1	S(0.499)S(0.499)T(0.001)DSLPGPISR;S(0.784)S(0.215)TDSLPGPISR	176.87	0.00019548	42762000.0	2640.8	2444.3	3572.8	2888.5	3010.3	2362.09	2537.7	2832.3999999999996	2602.0	3199.0	True	False	2524.7135940046383	2848.179029003882	2822.918105200857	2635.2696896855628	3406.2072143250034	2818.5304623671404	3106.84382381819	2732.7828865803976	2481.03358793466	2619.630101056207	0.9637672101059995	1.087244732703112	1.077601797315845	1.0059701515198844	1.300262664164554	1.075926888010158	1.185985694150309	1.0431941843539547	0.9470930979661341	1.0	11.35514739831543	-9.533574406160017	6.505464148221013	0.9789881761510303	1.1024360600376144	0.24551070462704871	0.08813622276372926	0.21084585241612636	40.60282245355866	0.057985443658315684	0.022828401518439238	2.9270193523842796e-10	9.533574406160017	0.12344788388658412	
S(ph)STPPLHVHVDENTPVHVHIK	ddPTM_K562_Methotrexat_30min_R1	1	SSTPPLHVHVDENTPVHVHIK	21	0	Q5BJF6-9;Q5BJF6-3;Q5BJF6-4	Q5BJF6-9			1	S(0.333)S(0.333)T(0.333)PPLHVHVDENTPVHVHIK	67.668	0.0041759	36118000.0	3487.8	2698.3	5842.9	4071.5	2934.3	2691.2	2558.4	3012.4	3198.6	4946.2	True	False	3334.480488173802	3144.1482117420856	4616.555137952888	3714.55791641155	3320.2118822023913	3211.2363120467267	3132.1863257502673	2906.452184555426	3049.8977841536516	4050.395250342048	0.8232481726054295	0.7762571347763082	1.139778923442849	0.9170852933668296	0.8197254038163327	0.7928204813531579	0.773303870896491	0.7175724848852669	0.7529876951875484	1.0	11.98384698226065	-7.837211398776198	4.037273306230027	0.7896460292915729	0.9206642845030647	0.1598290851888201	0.11379477170796408	0.3548457055873015	11.175368383040972	0.036815772438509135	0.04308894834672529	1.4547507883767174e-08	7.837211398776198	0.1310182552114918	
S(ph)T(ph)S(ph)PTRGGGNAAARTSPTVATQTGASATST(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	STSPTRGGGNAAARTSPTVATQTGASATSTR	31	2	Q6P1L5-2;Q6P1L5	Q6P1L5-2	FAM117B	Protein FAM117B	4	S(0.721)T(0.721)S(0.721)PT(0.721)RGGGNAAART(0.024)S(0.035)PT(0.035)VAT(0.017)QT(0.025)GAS(0.024)AT(0.11)S(0.11)T(0.735)R	45.07	0.021631	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
S(ph)T(ph)Y(ph)MNS(ph)YS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	STYMNSYSK	9	0	E9PLN1;E9PMC1;Q9H5F2	E9PLN1	C11orf1	UPF0686 protein C11orf1	5	S(0.999)T(0.999)Y(0.999)MNS(0.724)Y(0.283)S(0.995)K	78.548	0.0078075	0.0	1015.8	606.13	994.44	947.24	887.42	926.77	1015.0	867.97	1037.6	1152.3	True	False	971.1466482845773	706.2826800515986	785.7206338266741	864.1969398849754	1004.1312846348517	1105.8551861309243	1242.639587490823	837.443003129921	989.3622024754048	943.6073039847033	1.0291851750019099	0.7484921715517455	0.832677566725799	0.9158438433399249	1.0641410684238721	1.171944283878552	1.3169033158638705	0.8874910141046308	1.0484893432866467	1.0	9.882042775564614	-7.715346925881767	3.2385184682218946	1.0948896155382162	0.8600932812605115	0.38977602093084973	0.12308797082698367	0.24604483601768595	5.274219192065979	0.04016461669223761	0.051331011074113725	1.925985770309334e-08	7.715346925881767	-0.23479633427770463	
S(ph)TEHTPPYDVVPSMR	ddPTM_K562_Methotrexat_30min_R1	1	STEHTPPYDVVPSMR	15	0	A0A2U3TZM7;Q08289-6;A0A494C0B2;A0A2R8Y555;Q08289-7	A0A2U3TZM7			1	S(0.475)T(0.475)EHT(0.051)PPYDVVPSMR	89.44	0.013231999999999999	97921000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
S(ph)TELLIR	ddPTM_K562_Methotrexat_30min_R1	2	STELLIR	7	0	K7EMV3;A0A590UJJ6;B4DEB1;K7EK07;K7ES00;Q71DI3;Q16695;P84243;P68431;K7EP01;Q5TEC6;Q6NXT2	K7EMV3	H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;HIST2H3PS2;H3F3C	Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C	1	S(0.996)T(0.004)ELLIR;S(0.996)T(0.004)ELLIR	106.68	8.9201e-05	4457600.0	2357.4	1913.15	2769.0	2000.1799999999998	2117.13	2230.86	1936.34	1794.2200000000003	1934.5700000000002	2330.8999999999996	True	False	2253.771518671059	2229.2655195101984	2187.8247406239284	1824.8273248797884	2395.5697039045585	2661.9421221360567	2370.613535804907	1731.1162656264225	1844.6322629557094	1908.7514231171965	1.1807569552406187	1.1679181964247434	1.1462072610015268	0.9560319394023812	1.2550454055417732	1.3945986312816043	1.2419708020091165	0.9069364636277905	0.9664077996825937	1.0	10.89841351732186	-9.262333665810395	24.999666161851675	0.952504087580751	1.1902841954093055	0.509654629089936	0.10513962471465575	73.73740988711086	2061234.7414253193	0.06004791282991785	0.031486352979056845	5.465958552586947e-10	9.262333665810395	0.23778010782855452	
S(ph)TELVLSPDMPR	ddPTM_K562_Methotrexat_30min_R1	1	STELVLSPDMPR	12	0	Q8TDY2-2;Q8TDY2	Q8TDY2-2	RB1CC1	RB1-inducible coiled-coil protein 1	1	S(0.831)T(0.169)ELVLSPDMPR	117.07	0.0010892999999999999	16662000.0	1259.1	838.51	1355.5	1359.7	1074.2	1218.4	1075.3	1069.4	1272.6	1518.6	True	False	1203.7514716037704	977.0595252669664	1070.999074003516	1240.4972120704376	1215.4761285014517	1453.8385562565893	1316.4633974668798	1031.78859585831	1213.437103768503	1243.5668244651306	0.9679829406204326	0.7856912117989385	0.8612316225661314	0.9975316063967746	0.9774111890000274	1.1690876016107123	1.0586189431622242	0.8297009662525305	0.9757715306456598	1.0	10.280268319144232	-7.267753499078503	7.262208006716332	1.0026453685810262	0.8627584364224267	0.3065599254636566	0.0889624025941805	0.16650849074046975	64.807473097842	0.02663807603292222	0.04217126276125449	5.3981692991738065e-08	7.267753499078503	-0.1398869321585995	
S(ph)TEPELIQVK	ddPTM_K562_Methotrexat_30min_R1	4	STEPELIQVK	10	0	M0QXM4;Q15758-3;Q15758-2;Q15758	M0QXM4	SLC1A5	Amino acid transporter;Neutral amino acid transporter B(0)	1	S(0.982)T(0.018)EPELIQVK;S(0.968)T(0.032)EPELIQVK;S(0.99)T(0.01)EPELIQVK;S(0.97)T(0.03)EPELIQVK	173.72	7.636e-06	90993000.0	8244.7	6093.7	10550.8	9883.0	5615.2	4923.2	5179.88	8760.5	9068.6	12922.199999999999	True	False	7882.2728599250395	7100.580349810155	8336.331265213053	9016.572734347383	6353.697222827546	5874.538723048621	6341.5999472433205	8452.38824950133	8647.00276538979	10581.864361321817	0.7448850779769811	0.6710141150328633	0.787794190188593	0.8520778972847363	0.6004326842490243	0.5551515803321837	0.5992894759096278	0.7987617267516659	0.8171530526318014	1.0	13.36930621001436	-9.971361243383036	1.680521747407666	0.9941024739735587	0.691172440332215	0.5271959046262293	0.08965597114735553	0.32299499695790945	2.0674798486258252	0.09520733871650926	0.027588906614604416	1.0681660159120344e-10	9.971361243383036	-0.30293003364134363	
S(ph)TGSATSLASQGER	ddPTM_K562_Methotrexat_30min_R1	3	STGSATSLASQGER	14	0	Q5SW79-2;H0Y2V6;Q5SW79-3;Q5SW79	Q5SW79-2	CEP170	Centrosomal protein of 170 kDa	1	S(0.728)T(0.07)GS(0.195)AT(0.005)S(0.002)LASQGER;S(0.856)T(0.144)GSATSLASQGER;S(0.986)T(0.014)GSATSLASQGER	208.79	9.8195e-19	121516000.0	1869.19	2062.85	2405.56	2295.3100000000004	2014.24	2034.94	1788.42	2306.8599999999997	1726.5	2192.55	True	False	1787.0226457049114	2403.700900045273	1900.6658299224616	2094.0837359986735	2279.147865455933	2428.163354948114	2189.5187104042734	2225.726426259305	1646.2353918405795	1795.4579487561064	0.9953018654338082	1.338767583897221	1.0585966835030824	1.1663229080076507	1.269396404986776	1.352392216498496	1.2194764638855353	1.239642748414848	0.9168888600154026	1.0	10.810136148841789	-11.708721156533827	7.896208856866826	0.9999999338166241	1.185733888622668	0.11966943699499089	0.1368653035982059	8.216388243986152e-11	0.0	0.12912201626025993	0.031316688919633705	1.955594663463144e-12	11.708721156533827	0.18573395480604393	
S(ph)TPAMMNGQGSTTSSSK	ddPTM_K562_Methotrexat_30min_R1	1	STPAMMNGQGSTTSSSK	17	0	Q6ZN18-2;Q6ZN18;F5GZR7;A0A669KBC9;A0A669KBL4;G5EA50;Q6ZN18-3	Q6ZN18-2	AEBP2	Zinc finger protein AEBP2	1	S(0.5)T(0.5)PAMMNGQGSTTSSSK	104.88	0.0026515999999999996	0.0	347.8	281.8	647.27	472.02	205.51	219.63	176.28	586.41	421.04	499.14	True	False	332.5111284439613	328.3626602189969	511.4168724679129	430.63873945832734	232.53816716471164	262.07038912560296	215.81527732303678	565.7856279196479	401.46594229977273	408.7409092345094	0.8135009756343906	0.8033515921710772	1.2512006038879133	1.0535738648348858	0.5689133676396853	0.6411650588545413	0.5280001889882174	1.3842158079533857	0.9822015199105927	1.0	8.675042833906822	-9.266310464178874	24.991111270919266	1.137406472529466	0.8191277495104056	0.2809305389619655	0.22909599707361714	605.8774033618064	3108427.583924877	0.13148718515203503	0.06634486829553517	5.416135685809293e-10	9.266310464178874	-0.31827872301906035	
S(ph)TPPPNNLVNPVQELETERR	ddPTM_K562_Methotrexat_30min_R1	2	STPPPNNLVNPVQELETERR	20	1	Q8NDI1-3;Q8NDI1-2;Q8NDI1	Q8NDI1-3	EHBP1	EH domain-binding protein 1	1	S(0.883)T(0.117)PPPNNLVNPVQELETERR;S(0.5)T(0.5)PPPNNLVNPVQELETERR	92.95	0.00068142	27124000.0	1250.38	950.95	1192.8400000000001	1048.19	945.99	977.53	949.0	880.73	912.2	1295.83	True	False	1195.4147923627372	1108.0783241137508	942.4791851230943	956.2968101199618	1070.4042662456607	1166.4238377359673	1161.8374074175292	849.7542266974837	869.7920211045331	1061.1426301505667	1.1265354518771133	1.0442312773321758	0.8881738970277397	0.9011953557876304	1.0087279841860466	1.0992149449037423	1.0948927829359516	0.8007917150373189	0.8196749394387419	1.0	10.051402869266507	-9.266160980112286	24.99241064745749	0.8576749920228782	1.0165560981742472	0.3635621892953156	0.08978752491506208	457.31162309126495	2420623.0737322574	0.050769382956988025	0.025621026732906074	5.418000239410094e-10	9.266160980112286	0.15888110615136897	
S(ph)TPVS(ph)RT(ph)T(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	STPVSRTTK	9	1	A0A2R8Y4B4;A0A2R8YDY3;A0A2R8YEC5;B1AP15;B1AP13;H7BY55;P08174-4;P08174;P08174-3;P08174-5;P08174-2;P08174-6;P08174-7	A0A2R8Y4B4	CD55	Complement decay-accelerating factor	4	S(0.987)T(0.026)PVS(0.987)RT(1)T(1)K	76.143	0.028824000000000002	53643000.0	278.42	120.6	274.74	139.31	0.0	109.23	0.0	0.0	0.0	62.378	True	False	266.180990170695	140.52710015050044	217.07582854424643	127.09690859272834	0.0	130.33715159217596	0.0	0.0	0.0	51.080739744821514	5.210985422302542	2.7510780159511463	4.24966101956762	2.488157165061675	0.0	2.5515909175021165	0.0	0.0	0.0	1.0	5.6747075130066555	-7.376304253683735	0.7285724830035493	0.2516519892683429	4.883750856185097	0.7224332842071766	0.9595590754368511	0.501049959631817	0.4904048132131831	0.5000383360431716	1.517074466449847	4.204319831536588e-08	7.376304253683735	4.632098866916754	
S(ph)TRSVENLPECGITHEQR	ddPTM_K562_Methotrexat_30min_R1	1	STRSVENLPECGITHEQR	18	1	Q9UBF8-2;F8W860;A0A0B4J1S8;Q9UBF8-3;Q9UBF8	Q9UBF8-2	PI4KB	Phosphatidylinositol 4-kinase beta	1	S(0.333)T(0.333)RS(0.333)VENLPECGITHEQR	108.97	0.00053898	74368000.0	1311.6	1286.3	1488.1	2089.2	1143.8	1338.1	1251.2	1256.5	1382.8	1900.3	True	False	1253.9436344654957	1498.839211638381	1175.7681460897325	1906.0430796922547	1294.2297484453175	1596.6688871691906	1531.8134501167663	1212.3081828090199	1318.5139298216932	1556.1372557165084	0.8058052911843753	0.9631793121926477	0.7555684061740179	1.2248553735799066	0.8316938262938778	1.02604630877115	0.984369113000548	0.7790496489661024	0.8472992501002723	1.0	10.60375360039005	-12.057282735133976	14.119870749985871	0.9999957871372824	0.9181871058240255	0.03462146123021659	0.13528610866079427	0.0	0.0	0.1267645369000779	0.0307449161895017	8.764300603829599e-13	12.057282735133976	-0.08180868131325691	
S(ph)TSATDTHHVEMAR	ddPTM_K562_Methotrexat_30min_R1	1	STSATDTHHVEMAR	14	0	H3BQP2;H3BNP3;H3BTL2;H3BS02;O14874-2;O14874-3;O14874	H3BQP2	BCKDK	[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial	1	S(0.789)T(0.161)S(0.049)AT(0.001)DTHHVEMAR	140.77	0.00010979	49187000.0	1312.0	1112.9	2093.2	1362.4	1066.5	1496.5	1207.3	1427.2	1257.2	1667.7	True	False	1254.3260509444426	1296.7878089344276	1653.8659252704974	1242.960507262459	1206.7634435363977	1785.677445369325	1478.06775761347	1377.0045670553397	1198.7530464071683	1365.663369656592	0.9184738192544871	0.9495662238202348	1.211034843591343	0.9101514581701142	0.8836463438569411	1.3075531533209015	1.0823075367285737	1.0083045336433087	0.8777807716323278	1.0	10.415386193781972	-6.546400328893521	24.98824530275945	1.0398300059400145	0.9262465724621604	0.08755178575677258	0.13149206727575682	475.13549962847287	504760.4002133355	0.03440613670314755	0.09104020328660671	2.8418403159219917e-07	6.546400328893521	-0.11358343347785416	
S(ph)TTPPPAEPVSLPQEPPK	ddPTM_K562_Methotrexat_30min_R1	1	STTPPPAEPVSLPQEPPK	18	0	Q9UN86-2;Q9UN86	Q9UN86-2	G3BP2	Ras GTPase-activating protein-binding protein 2	1	S(0.46)T(0.08)T(0.46)PPPAEPVSLPQEPPK	87.429	0.014062999999999999	0.0	1211.7	970.73	1684.9	1112.7	1043.7	941.92	847.88	1027.8	1224.8	1323.4	True	False	1158.4351188486132	1131.126632911238	1331.2625155208584	1015.1513185781978	1180.9648438996142	1123.9327092163544	1038.038673341596	991.6516914374139	1167.8593153352685	1083.7194359918044	1.0689437509150421	1.0437448986748559	1.228419894769633	0.9367289031308605	1.0897330108496321	1.0371067195890489	0.9578481651864055	0.9150446679309286	1.0776399098780216	1.0	10.08177559052918	-7.987124709412216	1.03314700900966	0.9852326976698631	1.0926710171523788	0.2092458796744875	0.07684597344334343	0.7772964755582336	1.7804522650427783	0.03767493419027561	0.04506589232991835	1.0300902833884785e-08	7.987124709412216	0.1074383194825157	
S(ph)TTPPPAEPVSLPQEPPKPR	ddPTM_K562_Methotrexat_30min_R1	4	STTPPPAEPVSLPQEPPKPR	20	1	Q9UN86-2	Q9UN86-2	G3BP2	Ras GTPase-activating protein-binding protein 2	1	S(0.333)T(0.333)T(0.333)PPPAEPVSLPQEPPKPR;S(0.333)T(0.333)T(0.333)PPPAEPVSLPQEPPKPR;S(0.367)T(0.367)T(0.265)PPPAEPVSLPQEPPKPR;S(0.559)T(0.366)T(0.075)PPPAEPVSLPQEPPKPR	180.03	1.2085e-12	1339955000.0	8784.91	6487.32	12436.5	8816.900000000001	7490.96	6347.51	5249.88	8564.54	8382.2	11215.9	True	False	8398.73587515422	7559.239364414136	9826.24860482827	8043.936066120356	8476.15254101585	7574.076472606908	6427.299229139238	8263.320273772517	7992.513351570294	9184.59182570688	0.9144375748573695	0.8230348727372376	1.0698623075796845	0.8758076808166992	0.9228665466974624	0.8246503074211443	0.699791493308367	0.899693794844992	0.870208878439207	1.0	13.164999892322786	-8.253424264818497	23.193633235676064	0.8426574197889182	0.921485111748476	0.09154327338798307	0.0912962732380078	454.013617845165	1313795.009128306	0.030193214381265585	0.029630984671397773	5.5792488833833905e-09	8.253424264818497	0.07882769195955786	
S(ph)VAENGDTDT(ph)QT(ph)SMFLDSRK	ddPTM_K562_Methotrexat_30min_R1	1	SVAENGDTDTQTSMFLDSRK	20	1	Q8IYH5-4;Q8IYH5-2;Q8IYH5	Q8IYH5-4	ZZZ3	ZZ-type zinc finger-containing protein 3	3	S(0.931)VAENGDT(0.07)DT(0.541)QT(0.647)S(0.438)MFLDS(0.373)RK	44.662	0.033809	5341400.0	994.7	1189.8	1284.6	1404.9	1398.3	1511.8	1513.7	783.35	906.43	882.83	True	False	950.9741790201502	1386.3942268579217	1014.9800150976889	1281.734598247965	1582.2009593032753	1803.9339538318368	1853.185757226463	755.7991364929933	864.2902671451242	722.9409322023915	1.315424451238458	1.917714387307361	1.403959811772754	1.7729451206245104	2.18856187113822	2.495271568503213	2.563398577503221	1.0454507454578639	1.1955198947058112	1.0	9.497733966550141	-9.289072046810134	24.78641001868491	1.0903636828856693	1.9519338602929415	0.5173611393760051	0.3853526047764351	627.0137891161247	562425.2659421236	0.23402445845923409	0.1124632732360654	5.139583819436871e-10	9.289072046810134	0.8615701774072722	
S(ph)VAVSDEEEVEEEAER	ddPTM_K562_Methotrexat_30min_R1	1	SVAVSDEEEVEEEAER	16	0	Q9Y6X9-2;Q9Y6X9	Q9Y6X9-2	MORC2	MORC family CW-type zinc finger protein 2	1	S(1)VAVSDEEEVEEEAER	274.38	8.553599999999998e-129	23768000.0	1116.7	863.34	1111.0	1239.9	1096.8	1133.5	828.06	1239.2	1005.7	1107.8	True	False	1067.6112050988256	1005.9922607291296	877.8162827133207	1131.199892068939	1241.0484246326487	1352.5328328273504	1013.7735338104937	1195.6166336147544	958.9452265126388	907.1666851985203	1.1768633289980157	1.10893871781566	0.9676460754521902	1.2469592529419138	1.3680489428037839	1.490941912765864	1.1175162738572615	1.3179679689770696	1.0570772077049848	1.0	9.825223849475714	-7.3563683606488794	9.379520327613477	1.2541358560465907	1.0871136849569476	0.1511487891706098	0.14766153359624246	0.6162510061262292	56.7307994168795	0.04155724198217075	0.06167680537203875	4.401813513418102e-08	7.3563683606488794	-0.16702217108964312	
S(ph)VDFDSLTVR	ddPTM_K562_Methotrexat_30min_R1	2	SVDFDSLTVR	10	0	Q9Y5K6	Q9Y5K6	CD2AP	CD2-associated protein	1	S(1)VDFDSLTVR;S(0.981)VDFDS(0.018)LT(0.001)VR	92.866	0.012334	18667700.0	5055.9	4819.8	5862.200000000001	5139.5	5255.5	4935.4	4830.299999999999	5567.2	4796.2	5699.6	True	False	4833.648689763725	5616.190027407811	4631.804331702998	4688.928014588524	5946.6903680314435	5889.096200384743	5913.6177334550985	5371.3984204809985	4573.2257088594215	4667.347209746781	1.0356308353639638	1.2032938144562224	0.9923847795232462	1.0046237838909169	1.2741049895780243	1.2617651817474804	1.2670190298047124	1.1508461185968666	0.9798340477668328	1.0	12.188387079829457	-6.229015077015881	21.730453330073516	1.1360112110620304	1.0356297774113747	0.04473737822923052	0.11729262289756041	7607.1367055727815	5097726.748059116	0.03102607084032656	3.2544376873442276	5.901805910406873e-07	6.229015077015881	-0.10038143365065566	
S(ph)VEDVRPHHTDANNQSACFEAPDQK	ddPTM_K562_Methotrexat_30min_R1	2	SVEDVRPHHTDANNQSACFEAPDQK	25	1	E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3	E7EPN9	PRRC2C	Protein PRRC2C	1	S(0.725)VEDVRPHHT(0.267)DANNQS(0.007)ACFEAPDQK;S(0.949)VEDVRPHHT(0.032)DANNQS(0.019)ACFEAPDQK	64.0	0.0027386999999999997	53293000.0	3061.0	2232.0	4609.9	3725.3	2306.0	1873.82	2083.12	2793.7	3140.8999999999996	3497.4	True	False	2926.4421051379113	2600.800062486873	3642.344988010922	3398.7087329013766	2609.2794194045296	2235.9091952435338	2550.312687186092	2695.443987515766	2994.880244559559	2863.9869695010884	1.0218070599838318	0.9081047121314022	1.2717742876621485	1.1867053757906718	0.9110653949166084	0.7806981033971091	0.8904763584278321	0.9411509256919968	1.0457031671066828	1.0	11.48380921334005	-7.779614758895004	24.741603109006466	0.9159803011260857	1.0960752256204327	0.3538056918175446	0.11109880834768925	246.71328674770862	335841.79283066466	0.03732200804282039	0.04240193806859129	1.6610596978331772e-08	7.779614758895004	0.18009492449434694	
S(ph)VENLPECGITHEQR	ddPTM_K562_Methotrexat_30min_R1	4	SVENLPECGITHEQR	15	0	Q9UBF8-2;F8W860;A0A0B4J1S8;Q9UBF8-3;Q9UBF8	Q9UBF8-2	PI4KB	Phosphatidylinositol 4-kinase beta	1	S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR	201.04	6.3139e-13	472568000.0	8054.099999999999	6842.86	8871.25	7954.96	6855.370000000001	5831.780000000001	5781.490000000001	7489.62	7517.74	7606.370000000001	True	False	7700.051407707034	7973.526306267445	7009.295857804269	7257.561007672174	7756.9713154393885	6958.688949118553	7078.136304120514	7226.205819442974	7168.241908285899	6228.782685767712	1.2362048567372654	1.2801098880020871	1.1253074976945285	1.1651652295166985	1.245343064089147	1.117182810859435	1.1363594880735701	1.160131310401035	1.1508254935053006	1.0	12.604734524186389	-15.999999998933928	0.07306268188052478	0.39864590709466746	1.3838234465918169	0.6520351456590227	0.04445559856925953	189.61284872384837	0.9905552604639907	18.96181904845498	2.1574901512593794	1.0000000024547208e-16	15.999999998933928	0.9851775394971494	
S(ph)VPSIAAATGTHSR	ddPTM_K562_Methotrexat_30min_R1	2	SVPSIAAATGTHSR	14	0	Q8IY63-2;Q8IY63	Q8IY63-2	AMOTL1	Angiomotin-like protein 1	1	S(1)VPSIAAATGTHSR;S(0.854)VPS(0.146)IAAATGTHSR	99.927	0.0030912	18356000.0	2248.82	1923.69	2640.8199999999997	2440.3	2052.94	1781.03	1847.3999999999999	2687.67	2286.47	2765.26	True	False	2149.9645654610367	2241.5470753608315	2086.547970940586	2226.362687810172	2322.937593786789	2125.188840979705	2261.726476778865	2593.143122714141	2180.172508764396	2264.4446180827413	0.9494445341221759	0.9898882301916058	0.9214391706816054	0.9831826621112895	1.0258310471525562	0.9385033416180693	0.9987996432846401	1.1451563451835276	0.9627846454510789	1.0	11.14494154023716	-9.008966789797915	24.89490745089669	1.0467778966181716	0.9701046211353388	0.2525336254429592	0.051364407935900205	471.32322647963764	1308553.147282526	0.021243154825111913	0.013493316463870397	9.795648892020471e-10	9.008966789797915	-0.07667327548283276	
S(ph)VQEGENPDDGVR	ddPTM_K562_Methotrexat_30min_R1	2	SVQEGENPDDGVR	13	0	H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696	H7C5M1	RBM34	RNA-binding protein 34	1	S(1)VQEGENPDDGVR;S(1)VQEGENPDDGVR	234.36	6.798200000000001e-46	32982000.0	783.03	420.96000000000004	834.64	597.45	552.42	414.89	434.87	519.62	348.6	716.13	True	False	748.6089387736488	490.5164849034384	659.4604700304644	545.0724861009656	625.0729127785995	495.0616206543794	532.4006674011177	501.3446700765805	332.3936620884022	586.4319175584187	1.2765487627113585	0.8364423391988628	1.124530316794653	0.9294727482950602	1.0658916987006108	0.8441928309692706	0.9078644109579549	0.854906861420342	0.5668069082465828	1.0	9.195819816524287	-8.44916276321823	0.9987480368290791	0.7926808195404637	1.0493560963612911	0.32523650201509635	0.15019584108307574	0.6335597675015598	1.3122477085158	0.08938004103163134	0.06778814902190465	3.55498061401407e-09	8.44916276321823	0.25667527682082747	
S(ph)VRMAS(ph)SRMT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SVRMASSRMTR	11	2	F6TD35;E9PFL3;H0YN69	F6TD35	DHRS4L2		3	S(1)VRMAS(0.5)S(0.5)RMT(1)R	61.593	0.030632999999999997	12451000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
S(ph)VS(ph)PCSNVESR	ddPTM_K562_Methotrexat_30min_R1	1	SVSPCSNVESR	11	0	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	S(1)VS(0.999)PCS(0.001)NVESR	113.54	0.0040424	190280000.0	4196.8	3543.7	5207.9	4076.6	3614.4	3274.1	2961.6	3983.6	3793.9	4001.7	True	False	4012.3136971064278	4129.236192399077	4114.832960164448	3719.2108073298127	4089.7569529469806	3906.773487393053	3625.814189470762	3843.494530074024	3617.522417088894	3276.953352734174	1.224403665605644	1.2600839096332537	1.2556885976821053	1.1349599481563064	1.2480363657098237	1.1921968569169223	1.1064588961711983	1.1728865553936396	1.1039285664748817	1.0	11.678139420997729	-10.164811964040787	0.20751654626306906	0.9250895320817253	1.2921978791075277	0.7657631947628696	0.03857860536569492	2.0628626374791454	0.2966887431667563	0.2606045248459622	0.14663956118748933	6.842078237973225e-11	10.164811964040787	0.3671083470258024	
S(ph)VS(ph)PYSR	ddPTM_K562_Methotrexat_30min_R1	1	SVSPYSR	7	0	Q9NYV4-2;J3QSD7;Q9NYV4-3;Q9NYV4	Q9NYV4-2	CDK12	Cyclin-dependent kinase 12	2	S(1)VS(1)PYSR	97.635	0.016621	12006000.0	2841.9	2595.1	3583.9	3018.5	2421.4	2672.5	2453.2	2930.2	2613.7	3473.6	True	False	2716.973478794979	3023.8961658421545	2831.6883668913324	2753.8727915235827	2739.8565421275516	3188.9228017036553	3003.3925478152582	2827.1432051468287	2492.1896574884	2844.497380127804	0.9551682127662586	1.0630687118812852	0.9954969150873691	0.968140385982655	0.9632128900060541	1.1210848088601075	1.0558605428141807	0.9938990363984109	0.8761441212424057	1.0	11.473958036927538	-9.53789343269662	23.854214705259132	0.9370551153223549	1.0188164559633595	0.2362918539170683	0.056317200481485585	200.77459596525475	318964.2736049647	0.03849032956262886	0.01456258252939225	2.8980546259280037e-10	9.53789343269662	0.0817613406410046	
S(ph)VSGS(ph)PEPAAK	ddPTM_K562_Methotrexat_30min_R1	1	SVSGSPEPAAK	11	0	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2	A9Z1X7	SRRM1	Serine/arginine repetitive matrix protein 1	2	S(0.996)VS(0.006)GS(0.998)PEPAAK	107.09	0.0060107	15541000.0	6378.0	4869.3	10207.0	7624.8	5320.3	4856.0	4855.8	6665.5	6569.2	7673.5	True	False	6097.630756801568	5673.869061051676	8064.69018690807	6956.345622265704	6020.01270384125	5794.353274115226	5944.836757574324	6431.070586958636	6263.799325849485	6283.754792264711	0.9703801243657278	0.9029424680982455	1.2834189833180134	1.107036453877696	0.9580279471203863	0.9221163883173898	0.9460644080021082	1.0234439120500487	0.9968242767143316	1.0	12.617411168845136	-7.769981367813173	24.98649069037265	0.9715527627656432	1.0698353974961339	0.17829392811777045	0.09600187274226057	338.14200136718875	989109.4308273931	0.03195724150745675	0.03681165161834779	1.6983165124060764e-08	7.769981367813173	0.0982826347304907	
S(ph)VSTTNIAGHFNDESPLGLRR	ddPTM_K562_Methotrexat_30min_R1	1	SVSTTNIAGHFNDESPLGLRR	21	1	V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF5;V9GYG5;V9GZ14	V9GYM8	ARHGEF2	Rho guanine nucleotide exchange factor 2	1	S(0.35)VS(0.292)T(0.179)T(0.179)NIAGHFNDESPLGLRR	85.387	0.0026739	17759000.0	888.81	640.57	1127.5	1051.0	569.88	756.37	996.04	701.19	720.31	872.53	True	False	849.7389766310438	746.4133046716921	890.8531581991624	958.8604617827677	644.829208816242	902.527797764113	1219.4273248515863	676.5287502617244	686.822945320989	714.5063620114319	1.189267194541017	1.0446559252046936	1.2468092735959557	1.341990096608022	0.902482109467802	1.2631487216200221	1.7066710524714346	0.9468477626388164	0.9612551851707656	1.0	9.480803047004116														
S(ph)VTPASTLTK	ddPTM_K562_Methotrexat_30min_R1	1	SVTPASTLTK	10	0	A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6	A8MQ02	MLLT4	Afadin	1	S(0.719)VT(0.281)PASTLTK	132.17	0.00097308	28661000.0	3676.6	2808.6	5321.9	4782.4	3193.2	2798.6	2875.0	3649.6	3987.0	5904.5	True	False	3514.9810662365385	3272.6734119626494	4204.9059180666245	4363.134417155006	3613.1617701832383	3339.3898420384844	3519.7919350109514	3521.2414993870266	3801.6452402365417	4835.137834225188	0.7269660528301776	0.6768521444822643	0.8696558530974007	0.9023805663348129	0.7472717209027058	0.6906503923013	0.7279610335193235	0.728260831462169	0.7862537471686658	1.0	12.239341301544925	-10.04988170883881	18.45853387258183	1.0000000020817277	0.7606025051515583	0.5221456126766204	0.06879072801283329	330.39304248361964	122261.98112633688	0.0737818527047921	0.019050384291441423	8.914937260851447e-11	10.04988170883881	-0.23939749693016943	
S(ph)WHDVQVSSAYVK	ddPTM_K562_Methotrexat_30min_R1	1	SWHDVQVSSAYVK	13	0	A0A087WYR3;O43399;O43399-5;O43399-7	A0A087WYR3;O43399	TPD52L2	Tumor protein D54	1	S(1)WHDVQVSSAYVK	194.48	3.7573e-07	10883000.0	1184.2	753.52	1640.4	1499.0	905.43	1325.5	1029.4	1097.5	1143.9	1383.1	True	False	1132.143985921043	878.0263723499595	1296.1024573923771	1367.58499734764	1024.5099153128556	1581.6341154941797	1260.2691540522694	1058.9003029310777	1090.720338677347	1132.6071874869765	0.9995910307023909	0.7752258523964697	1.1443530216933933	1.2074662888040038	0.9045589032381415	1.3964542455390045	1.1127151301666633	0.9349228175750507	0.9630173203274757	1.0	10.145431874923295	-6.771766544851445	24.999551059164375	1.0909493179368381	0.8874084228490884	0.21679448336921825	0.1480301111969214	268.07970151846246	648959.9600295731	0.03931352991098555	0.083297326721544	1.691349873028168e-07	6.771766544851445	-0.20354089508774975	
S(ph)WSDRSIFSGIGSTAEPVSQSTTSDYQWDVSR	ddPTM_K562_Methotrexat_30min_R1	3	SWSDRSIFSGIGSTAEPVSQSTTSDYQWDVSR	32	1	Q86UE4;H0YBJ8	Q86UE4	MTDH	Protein LYRIC	1	S(0.481)WS(0.481)DRS(0.016)IFS(0.016)GIGS(0.002)T(0.002)AEPVSQSTTSDYQWDVSR;S(0.244)WS(0.244)DRS(0.143)IFS(0.123)GIGS(0.123)T(0.123)AEPVS(0.001)QSTTSDYQWDVSR;S(0.553)WS(0.237)DRS(0.052)IFS(0.118)GIGS(0.019)T(0.019)AEPVS(0.001)QSTTSDYQWDVSR	77.301	5.2934e-06	27958200.0	1976.73	1534.54	1868.0100000000002	2269.06	1761.96	1211.05	1718.08	2607.6	2167.01	2817.6899999999996	True	False	1889.8353160696706	1788.0966522798424	1475.9402288670653	2070.135032742919	1993.6886235099778	1445.0682727794997	2103.4031748534335	2515.8892299982504	2066.2661780900394	2307.3790370256525	0.8190398221289986	0.7749470822031929	0.6396609335454652	0.897180306973511	0.8640490320480505	0.6262812696098158	0.911598459161198	1.0903666842884123	0.8955035756732792	1.0	11.17203930208568	-8.991239163674983	24.235373702366868	0.9959576084777887	0.7740496375501364	0.5554589468613866	0.09176176569655893	97.22505269648616	268955.4219860353	0.03812673079681668	0.025656303960162507	1.0203774125109344e-09	8.991239163674983	-0.22190797092765224	
S(ph)WSPPPEVSR	ddPTM_K562_Methotrexat_30min_R1	3	SWSPPPEVSR	10	0	Q9NR19;Q9NR19-2;F8WCJ4;C9JXD9;C9IYL0;B4DEH9;C9JY31	Q9NR19	ACSS2	Acetyl-coenzyme A synthetase, cytoplasmic	1	S(0.617)WS(0.383)PPPEVSR;S(0.875)WS(0.125)PPPEVSR;S(0.95)WS(0.05)PPPEVSR	146.71	2.7466e-07	929275000.0	9384.8	9656.7	11401.099999999999	10646.0	9667.0	9615.8	9019.3	10210.4	10786.400000000001	11242.4	True	False	8972.255429042227	11252.305539165323	9008.164915250085	9712.681708981301	10938.379942490723	11473.9172597276	11042.107617198011	9851.29444469019	10284.942618331446	9206.292418916633	0.9745785839483526	1.2222407270102178	0.9784791211650582	1.0550046932057213	1.1881417018663325	1.2463124934149998	1.1994087429277431	1.0700609970250605	1.1171644512614498	1.0	13.168404552188136	-6.230895556472584	22.42052276607896	1.1239951936381418	0.974577587860824	0.1926087017349296	0.08870212741456619	4879.364255578993	3581432.9708788027	0.022913234843552125	2.1458862806513417	5.876306548986022e-07	6.230895556472584	-0.14941760577731777	
S(ph)WYY(ph)EKKS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SWYYEKKSR	9	2	A0A0A0MRJ7;P12259	A0A0A0MRJ7	F5	Coagulation factor V;Coagulation factor V heavy chain;Coagulation factor V light chain	3	S(0.98)WY(0.436)Y(0.584)EKKS(1)R	84.169	0.0064743	0.0	896.37	1075.9	1227.6	1130.1	1248.5	962.62	974.96	611.63	985.13	832.32	True	False	856.9666480831329	1253.6741878268945	969.9435361465994	1031.0258875934408	1412.6996336194954	1148.632691253872	1193.6195982463582	590.1186262248154	939.3315213228553	681.578782654299	1.2573258879124936	1.839367978775193	1.42308352435695	1.5127024400294216	2.0726872220375814	1.6852530044739755	1.751256976630051	0.8658113210723687	1.3781701326804507	1.0	9.412736615368022	-9.253036356195485	24.90170538604367	1.09149303923433	1.659927909428928	0.5324159619876423	0.24349484754270923	438.9088239414872	1300677.1354235432	0.11482968096783176	0.06487724327982781	5.584234453476679e-10	9.253036356195485	0.568434870194598	
S(ph)Y(ph)ETMMRVGKR	ddPTM_K562_Methotrexat_30min_R1	1	SYETMMRVGKR	11	2	A0A087WV88;H0YAC5;B4DE60;Q9BRK0;Q9BRK0-2	A0A087WV88	REEP2	Receptor expression-enhancing protein;Receptor expression-enhancing protein 2	2	S(0.959)Y(0.974)ET(0.067)MMRVGKR	53.211000000000006	0.033873	30778000.0	1111.8	1307.3	1892.9	1386.9	1137.1	1647.1	1225.9	990.5	1147.5	1428.0	True	False	1062.9266032317316	1523.3091046994136	1495.6061580090413	1265.3126303011616	1286.6485810081924	1965.3787639611178	1500.839281088671	955.6635535792553	1094.1529754631138	1169.3753623970806	0.9089695553811381	1.3026690604946651	1.2789786805010381	1.0820414650325973	1.1002870612655253	1.68070820299508	1.2834538244521663	0.8172427642226517	0.9356730188159857	1.0	10.191522385228854	-9.256074395391819	24.734005223581505	0.9073434121043059	1.2444618560801155	0.3586087036538401	0.1932973205842866	407.80954917111836	1880121.9365743394	0.09761475407149872	0.05422057006442059	5.545307127563012e-10	9.256074395391819	0.3371184439758096	
S(ph)YGSRSPFEHSVEHK	ddPTM_K562_Methotrexat_30min_R1	1	SYGSRSPFEHSVEHK	15	1	O14646-2	O14646-2	CHD1	Chromodomain-helicase-DNA-binding protein 1	1	S(0.947)Y(0.001)GS(0.052)RSPFEHSVEHK	102.5	0.0016514	27916000.0	1173.9	998.09	1922.5	1500.4	937.74	897.61	877.97	1223.3	1286.8	1576.4	True	False	1122.2967615881719	1163.0074078707542	1518.9935225169745	1368.8622615212807	1061.0692466402447	1071.0604288259003	1074.8771218022841	1180.2758456269598	1226.9769488679162	1290.8986843716802	0.8693918238319593	0.9009284941961385	1.1766946088850614	1.0603948071939882	0.8219616763779564	0.8297013869428631	0.8326580039280617	0.9143055608592832	0.9504827634595687	1.0	10.334160060450227	-7.7597895692846715	24.99999611196102	0.8811996550254043	1.0071323101170613	0.239548159060057	0.09506164489700467	62.823039060297	951960.926713665	0.030803468230668377	0.03768345400184134	1.738643057455869e-08	7.7597895692846715	0.12593265509165696	
S(ph)YNHLQGDVR	ddPTM_K562_Methotrexat_30min_R1	1	SYNHLQGDVR	10	0	O15520	O15520	FGF10	Fibroblast growth factor 10	1	S(0.577)Y(0.423)NHLQGDVR	81.594	0.027652	31941000.0	193.26	156.02	200.92	232.34	183.92	185.71	49.06	125.95	278.99	227.45	True	False	184.76452180299	181.7996531134418	158.74963773425776	211.97111293112118	208.10870373672216	221.59582918779637	60.06295385448258	121.52026711086044	266.01981579473113	186.2566009644371	0.9919891206340011	0.9760709267327052	0.8523168409186669	1.138059600752587	1.1173225682157562	1.1897340982299294	0.3224742293345657	0.6524346867795731	1.428243694007514	1.0	7.541147745604047														
S(ph)YSSPDITQAIQEEEKR	ddPTM_K562_Methotrexat_30min_R1	1	SYSSPDITQAIQEEEKR	17	1	P40818;P40818-2	P40818	USP8	Ubiquitin carboxyl-terminal hydrolase 8	1	S(0.863)YS(0.136)S(0.001)PDITQAIQEEEKR	161.59	5.5893e-09	136600000.0	1917.9	1266.7	2245.6	1665.3	865.38	1070.7	1202.0	1357.1	1482.4	2029.5	True	False	1833.591412428618	1476.0006447814167	1774.2792479397233	1519.3057345450459	979.1926383192948	1277.5976216217405	1471.5790976984931	1309.370023788398	1413.4835475612376	1661.9378837429117	1.1032851650863864	0.8881202235171757	1.067596608330393	0.9141772080695105	0.5891872662015616	0.768739694858159	0.8854597467772354	0.787857378182822	0.8505032356431271	1.0	10.69865074589745	-7.527129762901593	24.99250966977011	0.7995755947643852	1.003908360248796	0.40582114678308545	0.11082865486704042	113.7047125743118	668485.398463908	0.03192935158504222	0.04139394036375538	2.9707782599147194e-08	7.527129762901593	0.2043327654844107	
SAAEMYGS(ph)SFDLDYDFQR	ddPTM_K562_Methotrexat_30min_R1	1	SAAEMYGSSFDLDYDFQR	18	0	G3V2D6;G3V4C1;P07910-4;P07910-2;G3V4W0;B4DY08;B2R5W2;G3V251;G3V5X6;G3V3K6	G3V2D6	HNRNPC	Heterogeneous nuclear ribonucleoproteins C1/C2	1	SAAEMYGS(0.822)S(0.178)FDLDYDFQR	87.38799999999999	0.014062	0.0	318.6	381.72	360.07	220.09	430.51	325.68	248.29	267.56	422.51	558.8	True	False	304.59472548086836	444.79274186939483	284.49622764769146	200.79505141176926	487.12961094876164	388.61305072360943	303.97535288482425	258.14976314554843	402.8676023206273	457.595905117289	0.6656412832251983	0.9720208089611018	0.6217193477174378	0.43880430127604036	1.0645410186175128	0.8492494062507002	0.6642877470831182	0.5641435167112796	0.8804003659459453	1.0	8.837930331721855	-7.760219087955407	24.999990052329377	0.8072773050367341	0.6920213113583084	0.1439456744255091	0.1838891841345006	96.9374439908408	1985913.6856562234	0.058765607469200766	0.07168962397197563	1.7369243837817434e-08	7.760219087955407	-0.11525599367842576	
SAAEMYGSSFDLDYDFQRDYYDR	ddPTM_K562_Methotrexat_30min_R1	1	SAAEMYGSSFDLDYDFQRDYYDR	23	1	G3V2D6;G3V4C1;P07910-4;P07910-2;G3V4W0;B4DY08;B2R5W2;G3V251	G3V2D6	HNRNPC	Heterogeneous nuclear ribonucleoproteins C1/C2	0		104.38	0.0001112	17505000.0	277.68	128.93	212.15	221.96	226.07	330.22	273.16	382.52	310.78	354.7	False	True	265.47351968464403	150.23349106470997	167.622614201288	202.50111141513153	255.8021675389341	394.03034147000204	334.42308346698843	369.0665547856	296.3319056334871	290.460392886726	0.9139749383599216	0.5172253936986794	0.5770928440032015	0.697172889572256	0.8806783086556385	1.3565716742098684	1.1513551990456992	1.2706260950680763	1.020214503906737	1.0	8.182197641247582	-7.994414013124945	3.35969335656274	1.1754445550880888	0.6600492307932054	0.7262651421755675	0.1395209459138237	0.11717489931482888	2.785248321206827	0.04556964562445481	0.049581213420080726	1.0129452841223144e-08	7.994414013124945	-0.5153953242948833	
SAAEMYGSVTEHPSPS(ph)PLLSSSFDLDYDFQR	ddPTM_K562_Methotrexat_30min_R1	1	SAAEMYGSVTEHPSPSPLLSSSFDLDYDFQR	31	0	G3V2Q1;P07910;G3V555;G3V575;G3V576	G3V2Q1	HNRNPC	Heterogeneous nuclear ribonucleoproteins C1/C2	1	SAAEMYGSVTEHPS(0.219)PS(0.741)PLLS(0.018)S(0.007)S(0.014)FDLDYDFQR	69.72	0.00016141	0.0	404.08	314.24	278.37	295.13	263.05	335.47	201.62	442.99	478.83	380.62	True	False	386.31712703173065	366.1628188332776	219.9439411511315	269.2564111188854	297.6456857217526	400.29482966792324	246.83841736935943	427.40979061087796	456.56929781350993	311.68602971679087	1.239443190260251	1.1747809780437908	0.7056586442163625	0.86387064368442	0.9549535665496596	1.284288647879552	0.791945720485598	1.3712831178196785	1.4648372217014833	1.0	8.283949682209979	-9.279916641753061	24.86441152214239	1.3135451674579393	1.001091403922861	0.2613455279395278	0.21064058641649183	1005.2669581170733	1352755.531205423	0.11637922705514457	0.056072763649874825	5.249082011763765e-10	9.279916641753061	-0.31245376353507837	
SAAEMYGSVTEHPSPS(ph)PLLSSSFDLDYDFQRDYYDR	ddPTM_K562_Methotrexat_30min_R1	1	SAAEMYGSVTEHPSPSPLLSSSFDLDYDFQRDYYDR	36	1	G3V2Q1;P07910;G3V555;G3V575;G3V576	G3V2Q1	HNRNPC	Heterogeneous nuclear ribonucleoproteins C1/C2	1	SAAEMYGS(0.003)VT(0.003)EHPS(0.202)PS(0.758)PLLS(0.016)S(0.009)S(0.009)FDLDYDFQRDYYDR	78.383	7.8642e-09	27131000.0	274.97	149.71	302.81	211.97	233.64	223.68	214.01	283.27	311.03	338.64	True	False	262.88264803978166	174.44703286510295	239.25431914349306	193.38691920465592	264.3677552253575	266.9029943068561	262.0071902649371	273.30723354103566	296.57028318805425	277.3090145113078	0.9479772898946353	0.6290709055114022	0.8627715170569654	0.6973697539023572	0.9533327132954684	0.9624750020377453	0.9448203143582022	0.9855692359034042	1.0694577805582337	1.0	8.11535070474345	-7.86798301835059	6.0705328049509015	0.9850225186377328	0.7795174124104801	0.5687884203826634	0.08628727501056954	0.14788495754431552	7.43474890564407	0.02531365852894281	0.02888052954108499	1.3552424035871209e-08	7.86798301835059	-0.2055051062272527	
SAAPLIICPMSGIDGFSGHVGNHGHSMETS(ph)P	ddPTM_K562_Methotrexat_30min_R1	1	SAAPLIICPMSGIDGFSGHVGNHGHSMETSP	31	0	A0A140T9B9;A0A140T9N6;A0A140T9V9;H0Y551;P14373	A0A140T9B9	TRIM27	Zinc finger protein RFP	1	SAAPLIICPMS(0.001)GIDGFS(0.006)GHVGNHGHS(0.318)MET(0.318)S(0.358)P	56.688	0.00053624	15721000.0	709.58	571.71	727.39	1009.1	756.66	531.06	735.96	772.0	774.89	1027.1	True	False	678.3877128271018	666.1753600915639	574.7207793724951	920.633769728822	856.1740526828414	633.6798290262838	901.0177643445778	744.8483224262342	738.8655330340847	841.0822371975089	0.8065652594061359	0.7920454512406114	0.6833110413643596	1.0945823476148768	1.0179433292226199	0.7534100721681019	1.071260008232696	0.885583227756745	0.8784700239253526	1.0	9.716103057314166	-7.2493093160558715	24.93033089275019	0.9513309893823167	0.7637810711059815	0.44831821279225703	0.09980921284158006	720.400273230445	1480601.6920213078	0.027243636720313474	0.04673027574478066	5.632363610522989e-08	7.2493093160558715	-0.18754991827633527	
SAAS(ph)PVVSSMPER	ddPTM_K562_Methotrexat_30min_R1	2	SAASPVVSSMPER	13	0	P18583-6;P18583-2;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;H7C1M2	P18583-6	SON	Protein SON	1	S(0.001)AAS(0.981)PVVS(0.016)S(0.002)MPER;S(0.003)AAS(0.981)PVVS(0.016)S(0.001)MPER	104.7	0.0026906	138270000.0	9084.2	7981.3	11648.900000000001	9632.7	8947.099999999999	8191.200000000001	7637.7	9533.4	9552.5	11098.099999999999	True	False	8684.869445113954	9300.07416609609	9203.955081637441	8788.216146731564	10123.800474134556	9774.03347177361	9350.648647663711	9198.104918417443	9108.40636000993	9088.126547212221	0.9556281374380767	1.023321376279568	1.0127450397860878	0.9669997552385915	1.1139590125139738	1.0754728624208902	1.0288862725543824	1.0121013248037305	1.0022314624133322	1.0	13.14976720838721	-4.71289690523325	0.8643816016242462	1.0330465055118587	4.4663465902920033e-07	0.22053223479334105	0.0392572091264278	45.58586626878569	2.982673437110339	0.014298822648043918	79.15292911851076	1.9368816950185382e-05	4.71289690523325	-1.0330460588771997	
SAAVETASLS(ph)PSLVPAR	ddPTM_K562_Methotrexat_30min_R1	1	SAAVETASLSPSLVPAR	17	0	Q2KHT3;Q2KHT3-3	Q2KHT3	CLEC16A	Protein CLEC16A	1	SAAVET(0.001)AS(0.104)LS(0.576)PS(0.319)LVPAR	95.751	0.0027281	12702000.0	914.83	793.6	1138.2	913.82	938.31	842.1	915.24	1164.8	899.76	1015.6	True	False	874.6151685865128	924.7289111064442	899.3073744233134	833.7068193970784	1061.7142116311643	1004.823906946547	1120.5058680345824	1123.8333237850757	857.9303539892732	831.6649986347874	1.0516435945028706	1.111900720391534	1.0813336811090568	1.0024551000290296	1.2766128349443733	1.2082075217737998	1.347304347151725	1.3513053039744305	1.0315816529463202	1.0	9.6998587059599	-7.764761328736301	24.999961045673846	1.2275926153362426	1.0668024010684554	0.25230597591101844	0.11368755787504435	103.48480505977717	778794.4269619689	0.033953100981600405	0.04008650978900004	1.7188527418929533e-08	7.764761328736301	-0.16079021426778728	
SADGVIVSGVKDVDDFFEHER	ddPTM_K562_Methotrexat_30min_R1	1	SADGVIVSGVKDVDDFFEHER	21	1	G3V5X9;A0A0A0MRI2;Q9UNH7-2;Q9UNH7	G3V5X9	SNX6	Sorting nexin-6;Sorting nexin-6, N-terminally processed	0		77.66	0.012068	2285100.0	1944.8	1554.8	2456.9	1631.5	1751.4	1559.9	1412.5	1853.7	2067.0	2378.7	False	True	1859.308920637768	1811.7042729187249	1941.2302655250753	1488.4689280671616	1981.7397984150446	1861.328598083268	1729.2890811140778	1788.5043203128375	1970.9056211610068	1947.8943799257254	0.9545224524487128	0.9300834232027542	0.9965788112182427	0.7641425240540599	1.0173753868988573	0.9555593040697832	0.887773535842337	0.9181731508363582	1.0118133926933752	1.0	10.927699737396274	-9.762943426132114	24.98571295474757	1.0059067366235852	0.9274712879791647	0.18481463325934055	0.06541754723855464	66.11554804869199	1098151.3763821248	0.05157182306373791	0.01604884948159945	1.7260627248827622e-10	9.762943426132114	-0.07843544864442054	
SAES(ph)PSWTPAEHVAK	ddPTM_K562_Methotrexat_30min_R1	3	SAESPSWTPAEHVAK	15	0	Q13415	Q13415	ORC1	Origin recognition complex subunit 1	1	S(0.101)AES(0.45)PS(0.45)WTPAEHVAK;S(0.119)AES(0.861)PS(0.02)WTPAEHVAK;S(0.002)AES(0.986)PS(0.012)WTPAEHVAK	134.13	8.483e-05	77675000.0	10099.2	7485.2	14982.5	11344.3	8415.9	7339.4	7276.3	10509.7	9823.5	13566.099999999999	True	False	9655.251260440637	8722.002073354277	11837.877997976897	10349.762832161992	9522.73836329861	8757.635177109003	8908.195497989638	10140.067894045329	9366.807629160696	11109.147831803255	0.8691261838103904	0.7851189132963863	1.0655973056805883	0.9316432717307717	0.8571979154005788	0.7883264593921107	0.8018792829893997	0.9127673920241078	0.8431616691917098	1.0	13.439460533271612														
SAFS(ph)PYQTPVAHFPPPPEEPTATAAFGAR	ddPTM_K562_Methotrexat_30min_R1	2	SAFSPYQTPVAHFPPPPEEPTATAAFGAR	29	0	A0A0A0MQV9;Q9UPS6-2;Q9UPS6	A0A0A0MQV9	SETD1B	Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase SETD1B	1	S(0.059)AFS(0.846)PY(0.013)QT(0.082)PVAHFPPPPEEPTATAAFGAR;S(0.117)AFS(0.736)PY(0.084)QT(0.062)PVAHFPPPPEEPTATAAFGAR	64.127	0.00071747	0.0	233.41	181.7	672.46	284.4	322.48	403.93	304.46	274.82	253.56	481.88	True	False	223.14957587724268	211.72283662807573	531.3198357096306	259.4670935594855	364.89177240657966	481.983755768815	372.74290522902095	265.154424830541	241.77205094416294	394.6068624873288	0.5654984671849397	0.5365411926531672	1.3464536129973965	0.657533150650205	0.9246969758877336	1.2214277084050762	0.9445930637888744	0.6719458023593176	0.6126909436399538	1.0	8.624272235522838														
SAFSNLFGGEPLS(ph)YTR	ddPTM_K562_Methotrexat_30min_R1	2	SAFSNLFGGEPLSYTR	16	0	F8WBE5;P02786	F8WBE5	TFRC	Transferrin receptor protein 1;Transferrin receptor protein 1, serum form	1	SAFSNLFGGEPLS(0.862)Y(0.001)T(0.137)R;SAFSNLFGGEPLS(0.752)Y(0.001)T(0.247)R	130.01	9.1736e-05	13474100.0	2778.7	2135.5	2412.53	2629.1	2358.3	2377.4	2269.24	2806.7	3282.8999999999996	3049.2	True	False	2656.5516751214354	2488.355077706416	1906.1729221731484	2398.610884941081	2668.457786115224	2836.7989031881257	2778.1748349927857	2707.9867701472967	3130.2786955536876	2496.9603326478855	1.0639142482108686	0.9965537077906463	0.7633973584801644	0.9606123307523631	1.0686824901561311	1.1361009088117393	1.1126227351984754	1.0845133319661628	1.2536357324644416	1.0	11.285957187086904	-7.833542584371578	3.2657890881849663	1.120617431243655	0.9346501026730212	0.4382514254816072	0.09169175438210844	0.22592928302407686	4.843621858171582	0.030150663767495752	0.035847015869179245	1.467092225389485e-08	7.833542584371578	-0.1859673285706338	
SAFSNLFGGEPLSY(ph)TR	ddPTM_K562_Methotrexat_30min_R1	2	SAFSNLFGGEPLSYTR	16	0	F8WBE5;P02786	F8WBE5	TFRC	Transferrin receptor protein 1;Transferrin receptor protein 1, serum form	1	SAFSNLFGGEPLS(0.298)Y(0.675)T(0.027)R;SAFSNLFGGEPLS(0.208)Y(0.584)T(0.208)R	191.19	1.5304999999999998e-09	58552000.0	3263.7	2477.1000000000004	2991.0	3149.6000000000004	2639.2	2291.34	2455.0	2949.2	3373.5	3472.8999999999996	True	False	3120.231655844039	2886.398671499209	2363.229974433431	2873.4794580694643	2986.301059710509	2734.1090261761105	3005.5962436354407	2845.474964377527	3216.666721328812	2843.9241569109404	1.097157126452072	1.0149351783819736	0.8309750345101897	1.0103924364813677	1.0500635371915887	0.9613860550859027	1.0568482413047569	1.0005453054937552	1.13106628160673	1.0	11.473667275671641	-8.936216281423151	1.4293557523773437	1.054608044551586	0.9897108151874201	0.08847336717640997	0.0741971572798016	1.0418508733243408	4.167440991312806	0.051485002903839235	0.025843416452909596	1.1582004213083292e-09	8.936216281423151	-0.06489722936416586	
SAGAPASVS(ph)GQDADGSTSPR	ddPTM_K562_Methotrexat_30min_R1	1	SAGAPASVSGQDADGSTSPR	20	0	K7EQY5;P42679-3;P42679;P42679-2	K7EQY5	MATK	Non-specific protein-tyrosine kinase;Megakaryocyte-associated tyrosine-protein kinase	1	SAGAPASVS(0.982)GQDADGS(0.002)T(0.002)S(0.015)PR	157.7	3.8117e-15	5900200.0	1959.7	1413.8	2247.9	2049.2	1538.7	1673.1	1519.0	1762.6	1777.7	2108.2	True	False	1873.553934478524	1647.4064195089352	1776.096509371083	1869.5498175882476	1741.0660202245233	1996.4028959889192	1859.6744171414402	1700.6083589488098	1695.0551150159267	1726.3845511243173	1.0852471619132376	0.9542522947370288	1.028795414216601	1.0829277963421842	1.0085041708063505	1.1564068357126753	1.0772075178327547	0.9850692638794059	0.9818525738729607	1.0	10.753538144431483	-12.193520477624052	4.591945225091383	0.9999919982869648	1.0404103641610005	0.04100647338123398	0.058047445895225654	4.940064609469819e-06	8.676044710317361e-07	0.05838974667592804	0.014158790126515832	6.404415830940992e-13	12.193520477624052	0.04041836587403569	
SAGAPASVSGQDADGSTS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	SAGAPASVSGQDADGSTSPR	20	0	K7EQY5;P42679-3;P42679;P42679-2	K7EQY5	MATK	Non-specific protein-tyrosine kinase;Megakaryocyte-associated tyrosine-protein kinase	1	SAGAPASVS(0.173)GQDADGS(0.004)T(0.037)S(0.787)PR	173.03	2.4894e-12	6696700.0	2131.8	1786.7	2345.2	2158.5	1403.8	1315.8	1738.9	2044.9	2260.6	2431.3	True	False	2038.088624545247	2081.9218062926952	1852.9745690542577	1969.2676562874458	1588.4243057068866	1570.0597277761158	2128.89258984019	1972.9797079396462	2155.505199417789	1990.9680102213063	1.023667188062305	1.0456832031476382	0.9306902770619052	0.9891006014047166	0.7978150816849765	0.7885911374344963	1.0692751359694386	0.9909650470578578	1.0826418045653046	1.0	10.959254325476481	-11.166994790090294	8.961307845569706	0.9999993943101421	0.9637473134214356	0.006797719562105287	0.0981149612253412	0.0	0.0	0.1024307594016278	0.024843108254420043	6.807775254292421e-12	11.166994790090294	-0.03625208088870646	
SAGGSS(ph)PEGGEDS(ph)DREDGNYCPPVKR	ddPTM_K562_Methotrexat_30min_R1	1	SAGGSSPEGGEDSDREDGNYCPPVKR	26	2	B7Z7F3;Q9H6Z4-3;Q9H6Z4-2;Q9H6Z4;K7EID7;K7ENB9	B7Z7F3	RANBP3	Ran-binding protein 3	2	S(0.005)AGGS(0.436)S(0.561)PEGGEDS(0.986)DREDGNY(0.013)CPPVKR	65.244	0.0031326	32309000.0	1823.5	1436.3	2934.8	2030.6	1222.1	1393.7	1079.2	1690.9	1597.5	2135.2	True	False	1743.3411233972502	1673.6241620743258	2318.825586414989	1852.5804507098846	1382.8275708821666	1663.0128002747924	1321.2380717439373	1631.4300885887571	1523.2325736839425	1748.4945894889686	0.9970526268009645	0.9571800634301504	1.3261840215889436	1.0595288437531494	0.7908675149439981	0.9511112074763927	0.7556432142750266	0.9330484054088919	0.8711680223895556	1.0	10.771897616454359	-7.6548909746711375	6.438448769392642	0.8778952688758983	1.0973709615652745	0.43197195902672636	0.11326905574270091	0.19750932609305394	10.599421370609535	0.03367296033011203	0.04351466308644226	2.2136503548579024e-08	7.6548909746711375	0.21947569268937617	
SAGGSSPEGGEDS(ph)DREDGNYCPPVKR	ddPTM_K562_Methotrexat_30min_R1	4	SAGGSSPEGGEDSDREDGNYCPPVKR	26	2	B7Z7F3;Q9H6Z4-3;Q9H6Z4-2;Q9H6Z4;K7EID7;K7ENB9	B7Z7F3	RANBP3	Ran-binding protein 3	1	SAGGS(0.003)S(0.003)PEGGEDS(0.991)DREDGNY(0.003)CPPVKR;SAGGSS(0.001)PEGGEDS(0.979)DREDGNY(0.02)CPPVKR;SAGGS(0.002)S(0.005)PEGGEDS(0.976)DREDGNY(0.016)CPPVKR;SAGGS(0.047)S(0.015)PEGGEDS(0.935)DREDGNY(0.003)CPPVKR	62.611000000000004	0.0019062999999999999	227939400.0	7092.14	5003.59	9555.56	7915.839999999999	5441.200000000001	5538.69	4642.87	6149.35	6614.1	8481.83	True	False	6780.378017488659	5830.3482010119615	7549.978540453732	7221.870597334455	6156.813172967884	6608.963454655946	5684.1517848014955	5933.0738750152395	6306.6119346497435	6945.688396386862	0.9761995687879984	0.8394197764536775	1.0870021961223053	1.0397631142063992	0.8864223128942338	0.9515202925161342	0.8183712629202289	0.8542096242183305	0.9079894712711896	1.0	12.761901973373558	-7.783600074286872	24.992925831239774	0.8939819752785778	0.9823982863677969	0.21759246563503565	0.07537681726057285	356.1343275813964	401647.57013275265	0.024146568920480338	0.027400489969522244	1.6458866616873316e-08	7.783600074286872	0.0884163110892191	
SAGGSSPEGGEDSDREDGNY(ph)CPPVKR	ddPTM_K562_Methotrexat_30min_R1	1	SAGGSSPEGGEDSDREDGNYCPPVKR	26	2	B7Z7F3;Q9H6Z4-3;Q9H6Z4-2;Q9H6Z4;K7EID7;K7ENB9	B7Z7F3	RANBP3	Ran-binding protein 3	1	SAGGS(0.024)S(0.019)PEGGEDS(0.201)DREDGNY(0.757)CPPVKR	90.758	4.7491e-05	35444000.0	1414.5	896.66	2030.8	1669.5	962.52	1048.3	843.35	1156.3	1265.5	1430.8	True	False	1352.3202736744763	1044.8178243859672	1604.5628325240432	1523.1375270659682	1089.1082509823277	1250.8691386439436	1032.4927055274734	1115.6322736029206	1206.6671812187979	1171.6682552645268	1.1541835904474205	0.8917351986719819	1.369468555040592	1.2999733672242322	0.9295363649981627	1.0675966793702503	0.8812159080766152	0.9521741914489652	1.0298710200579508	1.0	10.194348429307619	-7.777076031402621	24.99079029560359	0.9741084377012683	1.171949010709614	0.382551604150818	0.12564090079215953	274.7836202997753	439162.3442615535	0.04100942812177803	0.046656849804871656	1.6707980841323555e-08	7.777076031402621	0.19784057300834568	
SALAPNLLTS(ph)GK	ddPTM_K562_Methotrexat_30min_R1	2	SALAPNLLTSGK	12	0	O15446;O15446-2	O15446	CD3EAP	DNA-directed RNA polymerase I subunit RPA34	1	SALAPNLLT(0.196)S(0.804)GK;SALAPNLLT(0.04)S(0.96)GK	139.86	4.0163e-06	10271600.0	5522.4	4378.7	6414.4	5181.4	4193.700000000001	3752.7	3834.2	4529.4	4555.2	6407.8	True	False	5279.641908335054	5102.205749825843	5068.105097962491	4727.154706642469	4745.2450568763115	4477.856163874016	4694.11695207617	4370.098434711641	4343.429746256708	5247.285327148473	1.0061663468192161	0.9723514982934098	0.9658527756707002	0.9008762458913859	0.9043238095564008	0.8533662426753174	0.8945800846372288	0.8328303422155393	0.8277479640347772	1.0	12.357355524970659	-7.2091230018167245	1.1117590885941553	0.8723558743482399	1.002812407925975	0.4635393967391942	0.04649597607123664	0.4658235857292276	1.0653898137816824	0.01617129464404657	0.04866365774160895	6.178413889897668e-08	7.2091230018167245	0.13045653357773512	
SALLTQNGTGS(ph)LPR	ddPTM_K562_Methotrexat_30min_R1	4	SALLTQNGTGSLPR	14	0	Q86UU1-3;Q86UU1-2;Q86UU1;A0A087WZL0	Q86UU1-3	PHLDB1	Pleckstrin homology-like domain family B member 1	1	SALLTQNGT(0.002)GS(0.998)LPR;SALLTQNGT(0.02)GS(0.98)LPR;SALLTQNGT(0.193)GS(0.807)LPR;SALLTQNGT(0.208)GS(0.792)LPR	174.59	6.7788e-08	115964800.0	3388.65	2677.16	3874.8700000000003	3652.3700000000003	3114.07	3059.26	3358.9799999999996	4293.43	3381.9800000000005	4042.1	True	False	3239.689003454941	3119.515186060645	3061.5877402316537	3332.1723927702465	3523.6247881982094	3650.4186979756496	4112.316770039333	4142.42763336071	3224.752487979731	3310.0365212501715	0.9787472079707867	0.9424413193128249	0.9249407734858826	1.0066875006900873	1.0645274653547834	1.1028333598557756	1.242378065510331	1.2514749026987027	0.9742347153202318	1.0	11.69263141974166	-7.846951080413352	1.755244535411638	1.137751465647582	0.94913848824177	0.4085322660655253	0.08529117886131482	0.3122450205364043	1.983565321520296	0.03126049533516639	0.03877352466928143	1.4224890094101692e-08	7.846951080413352	-0.18861297740581195	
SALQDEADKPY(ph)SS(ph)GS(ph)RS(ph)RPSS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SALQDEADKPYSSGSRSRPSSR	22	3	E9PE96;Q9Y6V0-6;Q9Y6V0	E9PE96	PCLO	Protein piccolo	5	S(0.001)ALQDEADKPY(0.737)S(0.736)S(0.788)GS(0.792)RS(0.769)RPS(0.327)S(0.85)R	48.63399999999999	0.018353	6570000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	124.43	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	120.05372637240463	0.0	0.0											0.0														
SAMDSPVPASMFAPEPSS(ph)PGAAR	ddPTM_K562_Methotrexat_30min_R1	4	SAMDSPVPASMFAPEPSSPGAAR	23	0	O00178;F8WAZ4	O00178	GTPBP1	GTP-binding protein 1	1	SAMDSPVPASMFAPEPS(0.257)S(0.743)PGAAR;SAMDSPVPASMFAPEPS(0.075)S(0.925)PGAAR;SAMDSPVPASMFAPEPS(0.035)S(0.965)PGAAR;SAMDSPVPASMFAPEPS(0.117)S(0.883)PGAAR	229.37	1.0808e-52	58954100.0	7698.099999999999	7387.5	8890.8	8339.5	6776.3	5977.81	6587.6	8217.4	7940.2	9118.9	True	False	7359.700741444678	8608.158808970331	7024.742579970827	7608.388982909033	7667.5022245060345	7132.937179888541	8065.036991679361	7928.389384333342	7571.061835095611	7467.378846052339	0.9855802006530597	1.1527684595138854	0.9407240110342716	1.018883485057309	1.026799682000799	0.9552129772630189	1.080035867731952	1.061736594297036	1.0138847902565014	1.0	12.866386210486752														
SAMPFT(ph)ASPASSTTAR	ddPTM_K562_Methotrexat_30min_R1	1	SAMPFTASPASSTTAR	16	0	O00151	O00151	PDLIM1	PDZ and LIM domain protein 1	1	S(0.001)AMPFT(0.876)AS(0.116)PAS(0.001)S(0.005)T(0.001)TAR	147.75	2.5404e-08	131050000.0	4500.9	4049.4	4753.0	4375.6	3832.8	3547.9	3785.0	4520.8	4130.7	4722.4	True	False	4303.045825225487	4718.4945219687925	3755.4102535881316	3991.9979415572607	4336.8803810467	4233.481462362729	4633.882599657899	4361.800901586165	3938.6646586017287	3867.127599008386	1.112724034844074	1.2201548568448362	0.9711110268383952	1.0322902049006333	1.1214733080332722	1.0947353957103159	1.198275071359457	1.1279175020510377	1.0184987585130851	1.0	11.917046652759959	-9.822350981830974	5.839972548720225	1.0042292084193813	1.1090910419765603	0.26054910969284817	0.06787735912593204	0.3080614064020012	19.886537496134068	0.06800889924723497	0.017973291928642953	1.5053899701594868e-10	9.822350981830974	0.10486183355717893	
SAMPFTAS(ph)PASSTTAR	ddPTM_K562_Methotrexat_30min_R1	1	SAMPFTASPASSTTAR	16	0	O00151	O00151	PDLIM1	PDZ and LIM domain protein 1	1	SAMPFT(0.183)AS(0.799)PAS(0.001)S(0.008)T(0.009)TAR	102.15	0.0014164000000000002	214690000.0	4949.5	4840.7	5725.1	6089.2	4193.0	4336.1	4364.7	5194.5	5508.1	6160.3	True	False	4731.925906363965	5640.543397168554	4523.4797481206415	5555.3692900928945	4744.452994606762	5173.9899571439555	5343.595081301673	5011.80649072937	5252.029633244774	5044.60997547251	0.9380162052906266	1.1181327049253644	0.8966956355623794	1.1012485240888308	0.9404994672878287	1.025647172388055	1.0592682303057845	0.9934973199310483	1.041117085122688	1.0	12.300527016193293	-8.439082322521784	24.99999841340596	1.025731855472247	1.0033001228821046	0.030905155018191688	0.06738949207105088	419.46917306968	125139.33922916475	0.021930321568422943	0.01934072336117044	3.6384606089141645e-09	8.439082322521784	-0.022431732590142417	
SAMPFTASPASS(ph)TTAR	ddPTM_K562_Methotrexat_30min_R1	1	SAMPFTASPASSTTAR	16	0	O00151	O00151	PDLIM1	PDZ and LIM domain protein 1	1	SAMPFT(0.007)AS(0.036)PAS(0.049)S(0.793)T(0.058)T(0.058)AR	103.66	0.0010723	29868000.0	3785.9	3484.4	4432.0	3261.1	3956.3	3345.3	3142.1	4134.1	4190.8	4613.9	True	False	3619.476369108662	4060.137875326733	3501.783766863581	2975.204426184383	4476.622795745942	3991.7318797153343	3846.795909216667	3988.701359769816	3995.9706227196666	3778.278000394885	0.9579698393634279	1.0746000889565006	0.926820039842911	0.7874498451075942	1.1848315013553978	1.0564950168563934	1.0181346922631476	1.055692926606496	1.0576168885142991	1.0	11.883513141771013	-7.772530885751228	24.999983156482607	1.0624317506134295	0.9458527994622431	0.37216124188917454	0.07944935512138519	265.63574524604894	598734.3745906415	0.02567943656070642	0.029387775168576973	1.6883757828777057e-08	7.772530885751228	-0.11657895115118644	
SAMRY(ph)LT(ph)SHLT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	SAMRYLTSHLTPR	13	1	Q53QW1	Q53QW1	C2orf57	Uncharacterized protein C2orf57	3	S(0.001)AMRY(0.981)LT(0.512)S(0.512)HLT(0.994)PR	66.00399999999999	0.027919	8318200.0	306.67	298.58	371.97	214.65	163.37	265.11	128.83	312.64	173.53	374.09	True	False	293.18915399628975	347.9152700077646	293.89858027081345	195.83196776562434	184.85601853777894	316.33875545730797	157.72340695216042	301.6442739939612	165.46262817613427	306.3386759937844	0.9570752143690747	1.1357210083875395	0.9593910377701594	0.6392662210552799	0.6034367614147736	1.0326438685258483	0.5148661246918773	0.9846757776026998	0.5401297359511062	1.0	8.25898371192541	-7.077165405976732	5.2697370166082	0.7544304418171804	1.0475328777529553	0.29415581668447144	0.18613293570781256	0.2375276289835701	11.632837959749008	0.04720987766886029	0.08510180147750239	8.37210360341632e-08	7.077165405976732	0.2931024359357749	
SAMRY(ph)LTS(ph)HLT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	SAMRYLTSHLTPR	13	1	Q53QW1	Q53QW1	C2orf57	Uncharacterized protein C2orf57	3	SAMRY(0.942)LT(0.491)S(0.593)HLT(0.974)PR	65.298	0.033229	5222600.0	0.0	0.0	215.11	0.0	141.63	0.0	0.0	0.0	149.2	151.14	True	False	0.0	0.0	169.96135065208142	0.0	160.25682748060007	0.0	0.0	0.0	142.26372456566145	123.76708142345579	0.0	0.0	1.3732355057365933	0.0	1.2948259394781922	0.0	0.0	0.0	1.1494471949202825	1.0	6.951483838880428	-9.775883610539289	24.823685879866023	1.0747243628614098	0.3557415240975784	0.24562173378646346	0.5184258411291303	366.49613195501894	629835.3664674303	0.48882815832504867	0.128587214990426	1.6753918152391527e-10	9.775883610539289	-0.7189828387638314	
SAPAS(ph)PNHAGVLSAHSS(ph)GAQTPESLSR	ddPTM_K562_Methotrexat_30min_R1	1	SAPASPNHAGVLSAHSSGAQTPESLSR	27	0	Q01167-2;Q01167	Q01167-2	FOXK2	Forkhead box protein K2	2	S(0.113)APAS(0.883)PNHAGVLS(0.026)AHS(0.339)S(0.504)GAQT(0.095)PES(0.007)LS(0.033)R	65.668	0.0021931	10404000.0	306.22	356.61	503.49	484.49	390.34	532.69	209.43	491.89	499.79	439.31	True	False	292.75893545747493	415.5337411664176	397.81432959795666	442.01551391925153	441.6765518518492	635.6248034572573	256.4000086780326	474.58994989409405	476.5548719884179	359.746701999063	0.8137918536310513	1.1550731079877972	1.1058178640342138	1.2286853818618266	1.2277431576092657	1.7668676319342957	0.7127237227005917	1.3192336364916284	1.324695596485716	1.0	8.490837650801712	-5.728454238387556	1.1119621114862288	1.234654502945598	6.438113756933789e-11	0.1805101424940675	0.2525411391780705	8.198064998054894	3.6922088669102213	0.07571616552498589	15.776063647638837	1.868726574613717e-06	5.728454238387556	-1.2346545028812168	
SAPAS(ph)PNHAGVLSAHSSGAQT(ph)PESLSR	ddPTM_K562_Methotrexat_30min_R1	2	SAPASPNHAGVLSAHSSGAQTPESLSR	27	0	Q01167-2;Q01167	Q01167-2	FOXK2	Forkhead box protein K2	2	S(0.013)APAS(0.987)PNHAGVLS(0.008)AHS(0.199)S(0.157)GAQT(0.545)PES(0.052)LS(0.038)R;S(0.315)APAS(0.547)PNHAGVLS(0.133)AHS(0.254)S(0.178)GAQT(0.463)PES(0.06)LS(0.049)R	94.682	1.6889e-05	39308000.0	1519.4299999999998	1751.69	2299.84	1715.08	1541.12	1603.17	1424.47	1823.4	1787.79	1830.26	True	False	1452.6376765141115	2041.1269988609456	1817.1350131731797	1564.7215992334832	1743.8042926421128	1912.9599131926095	1743.9436583182794	1759.269988487041	1704.6760331182566	1498.7821784179844	0.9692120025389013	1.3618569984702011	1.2124076729356548	1.0439953328542377	1.1634808031162724	1.276342847372127	1.1635737890605766	1.173799644684867	1.1373741012303737	1.0	10.54957501287753	-10.272003072858865	1.8712438808110137	1.0000528144119356	1.1776846934839897	0.19395445463665528	0.10324833672267862	1.7644164464615466	9.51593915943818	0.09647754404377358	0.02700404356948202	5.3456057709006224e-11	10.272003072858865	0.17763187907205413	
SAPAS(ph)PNHAGVLSAHSSGAQTPESLSR	ddPTM_K562_Methotrexat_30min_R1	4	SAPASPNHAGVLSAHSSGAQTPESLSR	27	0	Q01167-2;Q01167	Q01167-2	FOXK2	Forkhead box protein K2	1	S(0.002)APAS(0.998)PNHAGVLSAHSSGAQTPESLSR;S(0.165)APAS(0.835)PNHAGVLSAHSSGAQTPESLSR;S(0.054)APAS(0.946)PNHAGVLSAHSSGAQTPESLSR;S(0.018)APAS(0.982)PNHAGVLSAHSSGAQTPESLSR	124.88	8.810200000000001e-15	302723000.0	3231.1600000000003	3008.07	4030.1499999999996	3773.12	3089.35	2724.27	2807.38	3165.26	3296.8199999999997	3527.59	True	False	3089.1220752817408	3505.10243905237	3184.2765902584056	3442.3364277467163	3495.653674907801	3250.6966215143943	3437.0064286994957	3053.9360117135534	3143.5515577919828	2888.709267954005	1.0693779777532555	1.2133801341437658	1.102318127193791	1.1916520869491412	1.2101092047188529	1.1253111060971446	1.1898069725562361	1.0571974291745094	1.088220124006621	1.0	11.496209296876392	-9.695335392318158	1.2297919320992974	1.009307120523197	1.1603453612778172	0.49726841177132286	0.04957153362401467	0.33481287763701933	0.9948535771421949	0.043500870681816656	0.01421469167503422	2.0168082429194818e-10	9.695335392318158	0.15103824075462025	
SAPAS(ph)PTHPGLMSPR	ddPTM_K562_Methotrexat_30min_R1	2	SAPASPTHPGLMSPR	15	0	P85037-2;P85037	P85037-2	FOXK1	Forkhead box protein K1	1	SAPAS(0.999)PT(0.001)HPGLMSPR;S(0.091)APAS(0.714)PT(0.195)HPGLMSPR	207.08	5.620499999999999e-14	121043000.0	1558.53	1366.5900000000001	2320.44	1827.65	1614.2399999999998	1760.0500000000002	1652.27	1612.83	1737.51	1751.26	True	False	1490.0188873311288	1592.3957694417284	1833.411354688837	1667.422762109683	1826.5408542842888	2100.154752904965	2022.8336071167116	1556.1058547392527	1656.733539343717	1434.0898439436369	1.0389996788720652	1.110387732098264	1.278449437761233	1.1627045328794732	1.2736585939842109	1.464451311592655	1.4105347832002455	1.08508254298774	1.1552508696301949	1.0	10.48591969458173	-6.615834440788375	3.8184056948731366	1.2459018802195896	1.051382378785574	0.17359451176814544	0.13371290026990063	0.34769203090081796	9.369305177965481	0.03648479217397266	0.11514089110214949	2.421952153260767e-07	6.615834440788375	-0.19451950143401553	
SAPAS(ph)PVQSPAK	ddPTM_K562_Methotrexat_30min_R1	3	SAPASPVQSPAK	12	0	P35612	P35612	ADD2	Beta-adducin	1	SAPAS(0.99)PVQS(0.01)PAK;S(0.247)APAS(0.753)PVQSPAK;S(0.001)APAS(0.934)PVQS(0.065)PAK	159.66	1.8506e-07	71606000.0	7402.7	6660.799999999999	16044.2	8687.5	7311.7	6137.200000000001	5515.3	8858.2	7913.799999999999	9614.0	True	False	7077.2861717427	7761.383985758321	12676.741676965847	7925.880363213887	8273.316708959284	7323.127041577425	6752.246420579448	8546.65208512444	7545.889165333322	7872.811438435252	0.8989528362372838	0.9858465487776146	1.610192467595209	1.0067407844317915	1.0508719500849157	0.9301794027259113	0.8576664732010245	1.0855908530210037	0.9584745201052464	1.0	12.94266320933765	-7.490450548213792	24.999186312122216	0.9808816167417547	1.1739795822304069	0.17041296525001925	0.18324802270061621	1138.6868953606843	877824.0111700705	0.05314421984902161	0.07875011243289567	3.232581266596274e-08	7.490450548213792	0.1930979654886522	
SAPASPTHPGLMS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	SAPASPTHPGLMSPR	15	0	P85037-2;P85037	P85037-2	FOXK1	Forkhead box protein K1	1	SAPASPTHPGLMS(1)PR;SAPASPTHPGLMS(1)PR	109.99	0.0011828	17015900.0	3739.0499999999997	2441.5	4308.1	3871.0	3198.3399999999997	2985.08	2784.74	2839.9	3318.19	3645.8	True	False	3574.6858390120547	2844.916376595746	3403.8886836698985	3531.6354401152207	3618.9777702767933	3561.9044628286433	3409.288832383445	2740.0191073293554	3163.9280711563815	2985.5102914756844	1.1973450063858768	0.9529079114946057	1.140136308820901	1.182925227288229	1.2121806381340583	1.1930638701861775	1.1419450946519076	0.9177724542275862	1.059761234181681	1.0	11.543761826558056	-9.241316309954975	23.566239321621463	0.9915751511401542	1.143951030138454	0.45899257524494197	0.07623678002519245	352.53304987380716	412854.3116633162	0.037751841416716676	0.02174986941950614	5.736984678648597e-10	9.241316309954975	0.15237587899829974	
SAPT(ph)SPTATNISSK	ddPTM_K562_Methotrexat_30min_R1	1	SAPTSPTATNISSK	14	0	H3BUZ5;H0YN99;Q9H792	H3BUZ5	PEAK1	Pseudopodium-enriched atypical kinase 1	1	SAPT(0.615)S(0.377)PT(0.009)ATNISSK	163.33	1.9501e-40	0.0	2482.1	2280.0	4012.4	2928.7	1960.0	2235.7	1616.7	2578.5	2413.1	3099.1	True	False	2372.989855982623	2656.731246626378	3170.2520726903026	2671.945418100088	2217.7743547410587	2667.717383636618	1979.2861291590295	2487.812693492288	2300.9155077037385	2537.8229591069994	0.9350494081815788	1.0468544454973405	1.2492014312164	1.0528494150909105	0.8738885219642909	1.051183406653128	0.7799149747843301	0.9802940290081114	0.9066493387361335	1.0	11.309375713601867	-7.642442815000698	6.057486380748024	0.9299078188744386	1.0859239848233249	0.31784068956363243	0.09973992662592052	0.24106107080911146	11.83925815759186	0.029625650319258852	0.038332966114730214	2.278018176342302e-08	7.642442815000698	0.15601616594888623	
SAPTAPT(ph)PPPPPPPATPR	ddPTM_K562_Methotrexat_30min_R1	2	SAPTAPTPPPPPPPATPR	18	0	A6NHN7;A6NHB5;Q14202-2;Q14202	A6NHN7	ZMYM3	Zinc finger MYM-type protein 3	1	S(0.028)APT(0.3)APT(0.668)PPPPPPPAT(0.004)PR;S(0.006)APT(0.013)APT(0.981)PPPPPPPATPR	152.68	7.1006e-15	92452000.0	3342.1	3357.7	4374.2	3827.0	2899.06	2888.1	3444.5	3390.8	3096.0	4021.5	True	False	3195.185285717547	3912.5028538585034	3456.115196979843	3491.4928518008146	3280.3372045181673	3446.1844503649477	4217.016807007034	3271.5436420762658	2952.0676357593015	3293.16738086825	0.9702468524011464	1.1880668066215827	1.0494805751624539	1.0602233193747583	0.996104001143513	1.0464650143159	1.2805352171000823	0.9934337565355446	0.8964219835619115	1.0	11.685260125903472	-9.510971890125207	24.967632731624818	0.9471165726184411	1.0852740732892974	0.2903613717774568	0.08868893939470983	681.5514429034487	1429169.6906752374	0.05204219534046517	0.022785292348462736	3.0833875172153817e-10	9.510971890125207	0.1381575006708563	
SAQGDGPT(ph)S(ph)GHWDGGAEKADFNAK	ddPTM_K562_Methotrexat_30min_R1	1	SAQGDGPTSGHWDGGAEKADFNAK	24	1	Q96BZ9;Q96BZ9-3	Q96BZ9	TBC1D20	TBC1 domain family member 20	2	S(0.317)AQGDGPT(0.841)S(0.841)GHWDGGAEKADFNAK	58.36600000000001	0.020905	0.0	515.9	383.41	613.33	640.52	642.33	428.95	383.09	619.63	507.47	709.26	True	False	493.22165372121816	446.76198564430644	484.6004146503697	584.3666060714546	726.807653714706	511.83851666633564	469.0076843072505	597.8372616903728	483.87783046472003	580.80614113008	0.8492018572006695	0.7692101615438112	0.8343582829676663	1.0061302122846822	1.2513773568243431	0.8812553456656752	0.8075115793278249	1.0293232446322884	0.8331141773453605	1.0	9.181912897466296	-7.1887416135312385	5.448060444624099	0.9746372816034705	0.8093045294656015	0.2636312950777323	0.11890181021160093	0.31686722743245516	17.2903167704928	0.034514632136575504	0.0606367637286496	6.475277522270131e-08	7.1887416135312385	-0.16533275213786902	
SAQGSSS(ph)PVPSMVQK	ddPTM_K562_Methotrexat_30min_R1	3	SAQGSSSPVPSMVQK	15	0	A0A494C1F2;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A0A0MSW3;A0A494BZU9	A0A494C1F2	NUP214	Nuclear pore complex protein Nup214	1	SAQGS(0.002)S(0.011)S(0.642)PVPS(0.344)MVQK;S(0.001)AQGS(0.024)S(0.217)S(0.74)PVPS(0.019)MVQK;SAQGSS(0.006)S(0.993)PVPS(0.001)MVQK	262.42	3.943099999999999e-91	66180000.0	13704.300000000001	10471.6	21587.7	15467.699999999999	11363.7	9852.2	10280.2	13367.3	12314.8	15784.2	True	False	13101.875381065494	12201.853913233674	17056.736783375654	14111.670756153491	12858.225732128043	11755.998214011126	12585.796539234645	12897.16448234223	11742.287635933031	12925.528427974805	1.01364330704724	0.9440119977474284	1.3196162058999188	1.0917674147550913	0.9947930410565576	0.9095178026584617	0.9737162089245902	0.9978055871533124	0.908457066290545	1.0	13.657935642281915	-7.836573108910638	4.146985899911755	0.9585775980674094	1.098259840459282	0.31278736223738557	0.09409430907166606	0.2784352600705757	9.205265385529387	0.03115298850232707	0.03640644653165533	1.4568904318973608e-08	7.836573108910638	0.13968224239187266	
SAQGSSSPVPS(ph)MVQK	ddPTM_K562_Methotrexat_30min_R1	2	SAQGSSSPVPSMVQK	15	0	A0A494C1F2;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A0A0MSW3;A0A494BZU9	A0A494C1F2	NUP214	Nuclear pore complex protein Nup214	1	SAQGS(0.002)S(0.015)S(0.366)PVPS(0.616)MVQK;SAQGSSS(0.242)PVPS(0.758)MVQK	147.91	4.8675e-09	79823000.0	15414.0	11186.3	24840.1	16549.6	11982.0	11450.3	10020.6	14383.3	14194.5	19230.8	True	False	14736.419016202468	13034.645940410808	19626.50247005145	15098.7222629116	13557.843019646603	13662.908421458313	12267.974630946355	13877.431186467955	13534.600793212347	15747.91576973794	0.9357694841447387	0.8277060997150429	1.2462920653771097	0.958775909376283	0.8609293583916736	0.8676010604345312	0.7790221138038578	0.8812233561177403	0.8594534661673248	1.0	13.942873280693055	-7.669285119254655	4.810359330639179	0.8637361421113403	1.0026943968951878	0.21597664117096482	0.11001992629525251	0.3054845463710335	12.077992218300702	0.03346567227345687	0.04326871014117938	2.1414842308278077e-08	7.669285119254655	0.1389582547838475	
SAQIWSLAS(ph)PLR	ddPTM_K562_Methotrexat_30min_R1	2	SAQIWSLASPLR	12	0	A0A087X0J9;P59923	A0A087X0J9	ZNF445	Zinc finger protein 445	1	SAQIWSLAS(1)PLR;SAQIWSLAS(1)PLR	152.0	3.3100999999999996e-09	43620000.0	2360.9	2140.09	2519.1000000000004	2491.2	2026.17	1862.6399999999999	1918.63	2741.0	2701.5	2636.8999999999996	True	False	2257.117662861842	2493.7034971897565	1990.3753355383687	2272.800363837518	2292.646869564129	2222.56881847158	2348.9316174852393	2644.597476386409	2575.907854652377	2159.3318579165707	1.0452852138437023	1.1548495837021568	0.9217551847073568	1.0525479701070253	1.0617390102215167	1.029285429343882	1.0878048266983862	1.2247295230192392	1.192918932404276	1.0	11.07636926631739	-9.030165262434078	6.555021732267592	1.1571401179835472	1.0457864475091425	0.22726292994182062	0.0764230155089713	0.24053740279718996	35.122106274323414	0.03435802687953735	0.020445760356460518	9.328992363360782e-10	9.030165262434078	-0.1113536704744047	
SAS(ph)ASHQADIK	ddPTM_K562_Methotrexat_30min_R1	2	SASASHQADIK	11	0	C9JXK0;A0A494C1L1;Q14739	C9JXK0	LBR	Lamin-B receptor	1	S(0.009)AS(0.868)AS(0.123)HQADIK;S(0.259)AS(0.737)AS(0.003)HQADIK	79.744	0.032433	100656000.0	5086.1	3974.7000000000003	8196.1	5645.7	4370.3	4063.8	3371.7	4275.2	4787.5	6174.2	True	False	4862.521133924182	4631.4516166516905	6475.850616333615	5150.750246514724	4945.071052308598	4849.071835945113	4127.889553835279	4124.838792793573	4564.930169960486	5055.99255077875	0.9617342361739104	0.9160321282392575	1.2808267716565704	1.0187416604720627	0.9780613801630171	0.9590741654075883	0.8164350545175308	0.8158316594351477	0.9028751771513926	1.0	12.303778622591171	-8.266746630183404	1.8740190935951737	0.8715962660042431	1.0478608123325155	0.30761781614462935	0.10348003313443487	0.40334073175140067	2.7884993861880614	0.04412789375854461	0.040238699566648654	5.410698940696704e-09	8.266746630183404	0.17626454632827238	
SAS(ph)ASHQADIKEAR	ddPTM_K562_Methotrexat_30min_R1	1	SASASHQADIKEAR	14	1	C9JXK0;A0A494C1L1;Q14739	C9JXK0	LBR	Lamin-B receptor	1	S(0.192)AS(0.806)AS(0.003)HQADIKEAR	101.9	0.0024549	40248000.0	1818.5	1422.0	2921.8	2908.6	1481.9	1300.5	1396.3	1677.7	1675.0	2445.8	True	False	1738.560917410419	1656.9613301327674	2308.5541087594775	2653.6075538928258	1676.7958246381493	1551.8032193136019	1709.4558187324506	1618.6943400705875	1597.1296155997518	2002.8419197134333	0.8680469987662194	0.8273050977332478	1.152639200346768	1.3249211172255193	0.837208272971471	0.7748006490375605	0.8535150986739081	0.8081987520523788	0.797431689380792	1.0	10.967832841286757	-7.936606564573466	24.999981928403432	0.8319685295354389	1.0413013548266015	0.31505812326639215	0.14225770694809392	80.52964950634184	31757.033090418143	0.04755283108583974	0.05391983819260345	1.1571600602633466e-08	7.936606564573466	0.2093328252911626	
SAS(ph)DASISSGTHGQYSILQTAR	ddPTM_K562_Methotrexat_30min_R1	1	SASDASISSGTHGQYSILQTAR	22	0	E7ER60;A0A1W2PR85;O15056-3;O15056-2;O15056	E7ER60	SYNJ2	Synaptojanin-2	1	S(0.2)AS(0.796)DAS(0.004)ISSGTHGQYSILQTAR	107.58	2.6103e-05	12874000.0	334.84	165.22	291.85	394.05	388.71	256.09	298.3	461.55	381.34	504.19	True	False	320.1208345260955	192.51979674017977	230.59467336623106	359.5042483020929	439.83217828132496	305.5757681153561	365.2013684221798	445.3170248909698	363.6115866345131	412.8763052990088	0.7753431970242542	0.466289283907332	0.5585078882142008	0.8707311213748066	1.0652880115336105	0.7401145674708925	0.8845297338090101	1.0785724905391874	0.8806792299964569	1.0	8.689565815340154	-7.329442333747115	4.626332571494072	0.9344168447671418	0.5862564773034508	0.6283833481223384	0.11730232555198564	0.13366254713292341	5.598839767069408	0.03334490230863503	0.05120748244650107	4.683361335980886e-08	7.329442333747115	-0.34816036746369106	
SAS(ph)EPSLHR	ddPTM_K562_Methotrexat_30min_R1	2	SASEPSLHR	9	0	H7C155;P04049;P04049-2;P10398;Q96II5	H7C155;P10398	RAF1;ARAF	RAF proto-oncogene serine/threonine-protein kinase;Serine/threonine-protein kinase A-Raf	1	S(0.001)AS(0.998)EPS(0.002)LHR;S(0.019)AS(0.981)EPSLHR	103.26	0.0065649	11515300.0	5262.26	4963.23	6518.2	5524.5	4802.25	4888.53	4520.26	5531.9	5071.5	6238.6	True	False	5030.9373512522125	5783.319397014661	5150.118896473415	5040.175662339585	5433.830048497574	5833.169236225398	5534.04337118352	5337.33994148923	4835.727071948741	5108.729086729992	0.9847727812226637	1.1320466007948884	1.0081017820754938	0.9865811196431467	1.063636367528675	1.141804377800567	1.083252464014639	1.0447490659375653	0.9465616574794741	1.0	12.318748717053813	-9.661571678724679	5.844995908950575	0.9743019182752053	1.0591844625767715	0.282660667905819	0.05257516788892661	0.260742846988167	12.469860798892048	0.03864541590826485	0.013910180225626085	2.1798585897623674e-10	9.661571678724679	0.08488254430156617	
SAS(ph)EPSLNR	ddPTM_K562_Methotrexat_30min_R1	2	SASEPSLNR	9	0	H7C560;P15056;A0A2U3TZI2;A0A2R8Y8E0	H7C560	BRAF	Serine/threonine-protein kinase B-raf	1	S(0.034)AS(0.835)EPS(0.131)LNR;S(0.033)AS(0.965)EPS(0.002)LNR	113.44	0.003930100000000001	26349000.0	2835.8	2179.9	3104.8	3212.6000000000004	2645.3999999999996	1951.69	2021.6399999999999	2605.1	2625.5	2956.4	True	False	2711.1416274910453	2540.091423035455	2453.1449096024458	2930.9563458832763	2993.3164683836694	2328.826470666795	2475.0442321723635	2513.4771564152643	2503.441078063969	2420.96731189827	1.1198588325280818	1.049205171235369	1.0132912152700424	1.2106550681120622	1.2364134177576411	0.9619404852024922	1.0223369064127066	1.0382119345694336	1.0340664517692442	1.0	11.24136788474217	-8.285765154018849	24.999725528448128	1.014388512469957	1.1200790548962365	0.4361911711975459	0.06491555294542624	924.3218489595466	949926.70717865	0.02540639008148441	0.02241571598022079	5.178868050141871e-09	8.285765154018849	0.10569054242627951	
SAS(ph)LSHPGGEGEPAR	ddPTM_K562_Methotrexat_30min_R1	2	SASLSHPGGEGEPAR	15	0	Q2M3G4-2;Q2M3G4;C9JXU1;A6NN40	Q2M3G4-2	SHROOM1	Protein Shroom1	1	S(0.23)AS(0.692)LS(0.078)HPGGEGEPAR;S(0.071)AS(0.764)LS(0.165)HPGGEGEPAR	71.929	0.031164999999999998	14988800.0	4483.799999999999	3649.1	5622.3	4960.299999999999	4180.2	3824.9	4426.2	5142.700000000001	4476.0	5313.5	True	False	4286.6975207505275	4252.0517509054	4442.256063275518	4525.438200362573	4729.969570249272	4564.00779204352	5418.888021824514	4961.828326089893	4267.9117369698415	4351.173661132275	0.9851818967931127	0.9772195003126855	1.02093283542251	1.0400500078374144	1.0870560309970312	1.0489141890181097	1.2453853704414994	1.1403425173332917	0.9808644906761164	1.0	12.08718888256893	-7.4293120167826725	1.2806515964452798	1.1004552837477184	0.9809091519361091	0.23557813164409314	0.07068760365500275	0.6102877653699106	1.996525231987653	0.02623691469492082	0.05400872438063494	3.721242593079564e-08	7.4293120167826725	-0.11954613181160934	
SAS(ph)PDDDLGSSNWEAADLGNEER	ddPTM_K562_Methotrexat_30min_R1	4	SASPDDDLGSSNWEAADLGNEER	23	0	E9PQA1;E9PM92;O00193	E9PQA1	C11orf58;SMAP	Small acidic protein	1	S(0.14)AS(0.86)PDDDLGSSNWEAADLGNEER;S(0.416)AS(0.584)PDDDLGSSNWEAADLGNEER;S(0.409)AS(0.591)PDDDLGSSNWEAADLGNEER;S(0.47)AS(0.53)PDDDLGSSNWEAADLGNEER	219.01	1.8077999999999998e-42	379722000.0	4857.13	4245.59	5478.22	4881.72	4603.93	4282.349999999999	3755.77	5161.1900000000005	4680.469999999999	5785.91	True	False	4643.616380963244	4947.101584808983	4328.4164863058195	4453.747186959253	5209.4274923586745	5109.853530355713	4598.097028089073	4979.668022309657	4462.875971299206	4738.025632385781	0.9800741366240777	1.0441272311812977	0.9135485584374715	0.9400006527015382	1.0994933114651648	1.0784773926566331	0.9704668958858611	1.0510006506237914	0.9419273591080117	1.0	12.210070288140152	-7.726247195709842	24.999936751175063	1.0262022720841744	0.9707805495725121	0.19240258759261553	0.05413272119036639	316.2824272448734	224680.67995078152	0.016492910710127037	0.021291244216402317	1.8782474344187515e-08	7.726247195709842	-0.05542172251166222	
SAS(ph)PDDDLGSSNWEAADLGNEERK	ddPTM_K562_Methotrexat_30min_R1	3	SASPDDDLGSSNWEAADLGNEERK	24	1	E9PQA1;E9PM92;O00193	E9PQA1	C11orf58;SMAP	Small acidic protein	1	S(0.18)AS(0.62)PDDDLGS(0.1)S(0.1)NWEAADLGNEERK;S(0.078)AS(0.512)PDDDLGS(0.205)S(0.205)NWEAADLGNEERK;S(0.025)AS(0.723)PDDDLGS(0.201)S(0.051)NWEAADLGNEERK	172.17	3.8491e-25	530600000.0	5000.0	3381.02	7663.1	5698.62	4017.58	3419.95	2963.25	4913.6900000000005	4815.51	6783.0	True	False	4780.2059868309525	3939.6760874862784	6054.720032457646	5199.030832278326	4545.962189857441	4080.8069357105405	3627.8342439725925	4740.872737593993	4591.637991174185	5554.532971386139	0.8605954832667142	0.7092722480506094	1.0900502461049726	0.935997834392349	0.8184238374811541	0.7346804775005541	0.6531303824572064	0.8535141949856684	0.8266469953149521	1.0	12.439449898672441	-7.898641138147079	5.7638465070094425	0.7926230766009379	0.8984385751689754	0.09263021014916839	0.12087228024608763	0.4374895135388819	21.150141401042248	0.03879567312209481	0.04420048343676629	1.2628706261405608e-08	7.898641138147079	0.10581549856803751	
SAS(ph)WGSTDHRK	ddPTM_K562_Methotrexat_30min_R1	1	SASWGSTDHRK	11	1	Q9C073;D6RJ87	Q9C073	FAM117A	Protein FAM117A	1	S(0.013)AS(0.946)WGS(0.009)T(0.032)DHRK	72.73100000000001	0.032558	24491000.0	1575.9	1811.2	2641.9	2170.2	1948.1	1758.1	1453.2	2142.1	2279.0	2316.4	True	False	1506.6253229293804	2110.4700148639013	2087.4012936996596	1979.9419354528684	2204.3092961587013	2097.8279430028783	1779.1170921592745	2066.7611288461626	2173.04978743393	1896.8775136250692	0.7942660040553231	1.112602157864501	1.1004407394289184	1.0437900819800732	1.1620725536179233	1.105937483013217	0.9379188057109992	1.0895596125742635	1.1455930980388267	1.0	10.889410807802147	-6.257331937497018	24.929016144232094	1.0791707173402292	0.7942658882204955	0.6369564987513161	0.06414905300389778	257.8665686361334	1564989.9546039852	0.016117604167974562	0.12054146743272134	5.529273373822726e-07	6.257331937497018	-0.2849048291197337	
SASADNLT(ph)LPR	ddPTM_K562_Methotrexat_30min_R1	1	SASADNLTLPR	11	0	Q8ND76-3;Q8ND76-2;Q8ND76	Q8ND76-3	CCNY	Cyclin-Y	1	S(0.007)AS(0.215)ADNLT(0.778)LPR	150.09	1.2232999999999998e-07	191800000.0	1612.6	1437.7	2005.7	1911.6	1626.8	1660.5	1748.8	1480.5	1946.5	1912.8	True	False	1541.7120348727203	1675.2554882783945	1584.7309795122485	1744.0129959504657	1840.7527144350788	1981.3681243139074	2141.0129168511835	1428.4299758446114	1856.007639859651	1566.3733845890324	0.984255765605477	1.0695122279021163	1.0117198077443281	1.1134082161438412	1.175168534236832	1.2649398564913414	1.3668598674593277	0.9119345297222264	1.1849075438335601	1.0	10.613212441024022	-7.4368327751278	3.305003503956011	1.1622051077133415	1.0265897718868215	0.18020551154095577	0.12088795338589978	0.4338093163839642	9.042558196438721	0.0368002895045603	0.05594480020166809	3.6573559080966274e-08	7.4368327751278	-0.13561533582651997	
SASNVPS(ph)GKSTDEEEEAQTPQAPR	ddPTM_K562_Methotrexat_30min_R1	1	SASNVPSGKSTDEEEEAQTPQAPR	24	1	Q9P2K3;Q9P2K3-3	Q9P2K3	RCOR3	REST corepressor 3	1	SAS(0.001)NVPS(0.333)GKS(0.333)T(0.333)DEEEEAQTPQAPR	76.417	0.00083235	8154600.0	529.49	456.19	1001.7	812.11	514.09	430.59	404.53	505.36	678.69	764.05	True	False	506.21425359342436	531.5676435958272	791.4568590404438	740.9135771821163	581.7018459330769	513.7954234557818	495.25615007651504	487.5862023592252	647.1378500366541	625.6731412041242	0.8090714148592056	0.8495931958543266	1.2649685705179297	1.184186324118387	0.9297216192045203	0.821188236507914	0.7915573123746078	0.7792985989790977	1.0343065850504953	1.0	9.289265363360787	-7.990967968375023	24.450555534530896	0.8667120928093803	1.0344955457412803	0.16232323786084013	0.14891118947564097	260.9877536487278	706511.2661559511	0.04987187140152157	0.0564656175171758	1.0210147864297921e-08	7.990967968375023	0.1677834529319	
SASNVPSGKST(ph)DEEEEAQTPQAPR	ddPTM_K562_Methotrexat_30min_R1	2	SASNVPSGKSTDEEEEAQTPQAPR	24	1	Q9P2K3;Q9P2K3-3	Q9P2K3	RCOR3	REST corepressor 3	1	SASNVPS(0.022)GKS(0.168)T(0.81)DEEEEAQTPQAPR;SASNVPS(0.026)GKS(0.144)T(0.829)DEEEEAQTPQAPR	124.82	4.1741e-09	11032000.0	1924.03	1415.81	2879.5299999999997	1987.44	1735.01	1240.33	1553.69	1784.98	1743.0700000000002	2377.8	True	False	1839.451944968473	1649.7485378447757	2275.156004105751	1813.2042208996615	1963.1942261322868	1480.006218386191	1902.1445326981457	1722.2012416637046	1662.0350561572889	1947.157378646904	0.9446858097555133	0.8472599882969911	1.1684499820383167	0.9312057878750779	1.0082360304622768	0.7600855660751263	0.9768827900392736	0.8844694633057739	0.8535699653164405	1.0	10.927153779001532														
SASPDDDLGS(ph)SNWEAADLGNEERK	ddPTM_K562_Methotrexat_30min_R1	3	SASPDDDLGSSNWEAADLGNEERK	24	1	E9PQA1;E9PM92;O00193	E9PQA1	C11orf58;SMAP	Small acidic protein	1	SAS(0.013)PDDDLGS(0.953)S(0.034)NWEAADLGNEERK;S(0.015)AS(0.278)PDDDLGS(0.554)S(0.153)NWEAADLGNEERK;S(0.016)AS(0.343)PDDDLGS(0.618)S(0.023)NWEAADLGNEERK	234.62	8.193799999999997e-72	97926000.0	4934.1	3679.27	6774.0	5239.67	3435.38	2956.04	3116.21	3766.94	4597.34	5670.7	True	False	4717.202871924523	4287.2068306030815	5352.2299721872505	4780.31626621248	3887.1926850971117	3527.252893825286	3815.099417669735	3634.454585078081	4383.610666854544	4643.681279793505	1.0158326094538268	0.9232345142330105	1.1525834030593187	1.0294238510755522	0.8370929120419666	0.759581177367568	0.821567887156843	0.7826666745827348	0.9439947323536972	1.0	12.18105324053465	-7.760499778607483	22.98096611606155	0.8399262583282299	1.0313601495662548	0.4882224416970301	0.0855359482667612	7.000582209623456	171207.19254571933	0.02552178945414975	0.031051711869842697	1.7358021477399554e-08	7.760499778607483	0.1914338912380249	
SASQGALT(ph)SPSVSFSNHR	ddPTM_K562_Methotrexat_30min_R1	1	SASQGALTSPSVSFSNHR	18	0	A0A087WW76;A0A452Q6Z5;Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3	A0A087WW76	ARHGAP21	Rho GTPase-activating protein 21	1	S(0.001)AS(0.005)QGALT(0.612)S(0.349)PS(0.029)VS(0.001)FS(0.004)NHR	123.0	2.3124e-06	0.0	1306.6	1225.7	1877.4	1502.0	1327.0	1546.2	912.91	1470.6	1523.1	1981.8	True	False	1249.1634284786653	1428.2260916622586	1483.359396189009	1370.3219920054407	1501.52375956193	1844.9812669763105	1117.6533062229041	1418.8781644559851	1452.2914134447653	1622.876815965362	0.7697216548968969	0.8800582259921458	0.9140308011034333	0.8443783154239651	0.92522349496302	1.1368584779978081	0.6886864703640937	0.8742981294066802	0.8948870297225088	1.0	10.664337781319075	-6.259020125151994	2.842880586576242	0.903776803710507	0.745065351659936	0.1309112421618044	0.10719760674298005	0.9548103636593959	10.7691721076861	0.027681022318908302	0.35209237777021746	5.507821726370049e-07	6.259020125151994	-0.1587114520505709	
SASQGALTS(ph)PSVSFSNHR	ddPTM_K562_Methotrexat_30min_R1	1	SASQGALTSPSVSFSNHR	18	0	A0A087WW76;A0A452Q6Z5;Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3	A0A087WW76	ARHGAP21	Rho GTPase-activating protein 21	1	SASQGALT(0.032)S(0.958)PS(0.009)VS(0.001)FSNHR	71.143	0.01753	26348000.0	2042.4	1923.7	2659.7	2332.5	1946.9	1895.8	1755.9	2048.7	2138.4	2234.3	True	False	1952.6185415007074	2241.5587276908595	2101.4653169510516	2128.0133464398737	2202.9514751251872	2262.136519165497	2149.7052725863427	1976.6460597857845	2038.9862507453774	1829.646619190336	1.0672107504370376	1.2251320578412048	1.148563495764555	1.1630734176316366	1.2040311238352945	1.2363789244540284	1.1749292185928453	1.0803430777580971	1.1144153353764452	1.0	10.837349315700221	-9.864905999832613	1.1496407560578674	1.0072918254126986	1.177363872296465	0.5307260444018942	0.049186374883566406	0.3466517547479713	1.0039369462654968	0.04598500741901655	0.014904719501791135	1.3648785235471034e-10	9.864905999832613	0.17007204688376643	
SASS(ph)GAEGDVSSEREP	ddPTM_K562_Methotrexat_30min_R1	1	SASSGAEGDVSSEREP	16	1	Q8TEA8	Q8TEA8	DTD1	D-tyrosyl-tRNA(Tyr) deacylase 1	1	S(0.002)AS(0.055)S(0.943)GAEGDVSSEREP	94.339	0.012308	45411000.0	2921.8	2344.6	3448.8	3037.4	2449.6	2076.0	2291.2	2333.6	2675.1	3455.5	True	False	2793.3611704645355	2732.0052986141236	2724.9440106405946	2771.1158578677273	2771.7653364151492	2477.1576188350946	2805.059923998991	2251.525965302929	2550.7351848900857	2829.6754655203886	0.9871666219330297	0.9654836153133544	0.9629881743839718	0.9793051859246015	0.9795347099655509	0.8754211035927173	0.9913009312123111	0.7956834600779437	0.9014232253736544	1.0	11.466420885022284	-8.248383320078771	24.023181760737494	0.9049044097135773	0.9739562235101444	0.2389092693644288	0.054538482412038417	618.1049150603483	1137315.2190999037	0.01748823223105159	0.01737161244773711	5.644385661158471e-09	8.248383320078771	0.06905181379656711	
SASSASSLFS(ph)PSSTLFSSSR	ddPTM_K562_Methotrexat_30min_R1	2	SASSASSLFSPSSTLFSSSR	20	0	Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2;E9PR38;Q14671-4;H0YDK8	Q5T1Z4	PUM1	Pumilio homolog 1	1	SASSASSLFS(0.998)PS(0.001)STLFSSSR;SASSAS(0.006)S(0.126)LFS(0.833)PS(0.013)S(0.019)T(0.003)LFSSSR	205.98	1.3805000000000001e-21	37416000.0	4227.4	3495.9	4059.8	4121.2	3467.0	3077.9	3273.2	4725.4	4260.1	5768.3	True	False	4041.568557745837	4073.5380548601524	3207.7034604496307	3759.9007945757817	3922.9712693302286	3672.660614167887	4007.2984214531643	4559.205003617784	4062.048880845673	4723.604974030173	0.855611038595714	0.8623790679483122	0.6790795331288727	0.79598120826091	0.8305036705859751	0.777512225166953	0.8483559576816482	0.9651960798338894	0.859946778610477	1.0	12.205672604639128	-9.064903964269615	3.9016893852703483	0.9335408165047205	0.7990908079925673	0.5379146552433982	0.05838030331480276	0.19366617214824733	5.759714239825392	0.029254305110789153	0.016632645967894672	8.61184165165152e-10	9.064903964269615	-0.13445000851215327	
SASVVSSDSIS(ph)TSADNFSPDLR	ddPTM_K562_Methotrexat_30min_R1	1	SASVVSSDSISTSADNFSPDLR	22	0	Q13614	Q13614	MTMR2	Myotubularin-related protein 2	1	SASVVS(0.005)S(0.031)DS(0.003)IS(0.316)T(0.316)S(0.242)ADNFS(0.087)PDLR	125.23	6.3119e-07	13620000.0	1254.5	1026.2	1014.5	1231.8	1254.9	1245.0	1145.8	1332.6	1460.8	1391.3	True	False	1199.3536820958864	1195.7621075824502	801.570313962794	1123.8100064928765	1419.9413457982414	1485.5786297927223	1402.7748170906266	1285.7317026751289	1392.8877268466376	1139.3220880273516	1.0526906260304976	1.0495382474790953	0.7035502272677353	0.9863848145335854	1.2463037105308477	1.3039145342691347	1.23123639208946	1.1285059038057221	1.222558345426547	1.0	10.153959941375781	-7.680564801435576	5.362267829779538	1.202711181598802	0.9321069586702622	0.4954678601063268	0.11892881269419686	0.16586325907444915	8.099461244806555	0.03619977641798588	0.046671477207316486	2.0865807602601792e-08	7.680564801435576	-0.2706042229285399	
SASVVSSDSISTS(ph)ADNFSPDLR	ddPTM_K562_Methotrexat_30min_R1	1	SASVVSSDSISTSADNFSPDLR	22	0	Q13614	Q13614	MTMR2	Myotubularin-related protein 2	1	SASVVSSDSIS(0.006)T(0.021)S(0.68)ADNFS(0.293)PDLR	229.48	4.1535e-52	13333000.0	1172.8	1175.8	1585.8	1655.0	1516.7	978.16	1411.7	1261.2	1314.5	1550.5	True	False	1121.2451162710686	1370.0809648172342	1252.9622512392289	1509.908719553264	1716.1726346100832	1167.175576319718	1728.3096607495515	1216.8428811450347	1253.3891819139544	1269.6894253478106	0.883086126328824	1.0790677920641285	0.9868257750480992	1.1891953176971994	1.3516475764456855	0.9192606892823333	1.3612066275783226	0.9583783694281777	0.9871620231621674	1.0	10.310259931812377	-5.880435671751614	1.2443708691302522	1.1117623522335964	0.5712573825046378	0.1459869632782066	0.15105750650828512	6.293062404566365	4.4563091326182285	0.04402161488771095	5.472410442324199	1.3169349643495017e-06	5.880435671751614	-0.5405049697289587	
SAT(ph)LPLPAR	ddPTM_K562_Methotrexat_30min_R1	1	SATLPLPAR	9	0	Q9BX66-4;Q9BX66-9;Q9BX66-8;Q9BX66-10;Q9BX66-6;Q9BX66-5;Q9BX66-12;A0A0U1RQI5;Q9BX66-7;Q9BX66-3;Q9BX66-2;Q9BX66-11;Q9BX66	Q9BX66-4	SORBS1	Sorbin and SH3 domain-containing protein 1	1	S(0.009)AT(0.991)LPLPAR	89.82700000000001	0.033836	25309000.0	1442.6	1553.5	1263.3	1911.5	1275.3	1481.7	1460.7	1467.6	1435.4	1859.7	True	False	1379.1850313204673	1810.1894700149453	998.150594015966	1743.9217627952066	1443.0243033679951	1768.017554830424	1788.2991580766964	1415.9836761564004	1368.6685673026166	1522.8903091385528	0.9056364880938965	1.1886538768763377	0.6554317064244672	1.1451394446010257	0.9475562978559269	1.1609618527486272	1.1742796886587823	0.9298001751402398	0.898730892888028	1.0	10.572596315679057														
SATAS(ph)PQQPQAQQR	ddPTM_K562_Methotrexat_30min_R1	1	SATASPQQPQAQQR	14	0	Q9BX66-4;Q9BX66-9;Q9BX66-8;Q9BX66-10;Q9BX66-6;Q9BX66-5;Q9BX66-12;A0A0U1RQI5	Q9BX66-4	SORBS1	Sorbin and SH3 domain-containing protein 1	1	S(0.014)AT(0.009)AS(0.977)PQQPQAQQR	104.95	0.0023929000000000003	580040.0	298.39	131.81	299.31	194.28	143.28	139.25	237.96	261.09	201.88	201.23	True	False	285.2731328820975	153.58936211308009	236.488921313163	177.24777403915914	162.12383140168308	166.15809172581248	291.3285874278979	251.9073167127791	192.49464286404645	164.78529704143185	1.7311807424807537	0.932057440018227	1.4351336287830507	1.075628573795597	0.9838488889025118	1.0083308080819582	1.7679282840061232	1.5287002010224384	1.1681542365739563	1.0	7.364443713656905	-8.722388733035206	24.999997653997795	1.4102567183899972	1.178418699087906	0.06550511882530652	0.296374465437801	338.15425306001214	216483.9084995513	0.1103924591815766	0.08550823982839162	1.8950089565983123e-09	8.722388733035206	-0.23183801930209125	
SATDGNTS(ph)TTPPTSAK	ddPTM_K562_Methotrexat_30min_R1	2	SATDGNTSTTPPTSAK	16	0	A0A669KAU9;A0A669KAX4;K4DI93;Q13620-1;Q13620	A0A669KAU9	CUL4B	Cullin-4B	1	SATDGNT(0.073)S(0.342)T(0.342)T(0.242)PPT(0.001)SAK;SATDGNT(0.087)S(0.488)T(0.139)T(0.28)PPT(0.005)S(0.002)AK	139.58	2.3324e-06	31840000.0	13135.1	9488.2	19982.1	15387.3	10112.5	9297.4	8460.1	11238.0	12139.2	15213.4	True	False	12557.696731524658	11055.963778175616	15788.130281553425	14038.319299324441	11442.471001183141	11093.990965971776	10357.492782395184	10842.753170240969	11574.851241605083	12458.105839139884	1.007994063758223	0.8874514248739861	1.2672978127984382	1.1268421925923897	0.9184759825393438	0.8905038301342375	0.8313858395595612	0.8703372174103764	0.9291020152710646	1.0	13.604797113704949	-7.843912645190339	6.096492737675886	0.8935506231876796	1.0726272309588718	0.40330338601379423	0.09827289804107216	0.21450659553981294	12.480489256046306	0.03242153274625682	0.0370736960840431	1.432476001217448e-08	7.843912645190339	0.17907660777119216	
SATDGNTSTT(ph)PPTSAK	ddPTM_K562_Methotrexat_30min_R1	2	SATDGNTSTTPPTSAK	16	0	A0A669KAU9;A0A669KAX4;K4DI93;Q13620-1;Q13620	A0A669KAU9	CUL4B	Cullin-4B	1	SATDGNTS(0.016)T(0.033)T(0.946)PPT(0.004)SAK;SATDGNT(0.04)S(0.154)T(0.154)T(0.644)PPT(0.006)S(0.001)AK	151.73	1.8537999999999998e-10	44356000.0	11079.9	7905.5	17266.0	12507.4	9108.3	8735.8	7760.0	9315.599999999999	10576.7	14033.2	True	False	10592.840862697663	9211.749504475802	13642.102553850762	11410.895660991242	10306.20109963672	10423.869714171293	9500.377535890437	8987.965067867653	10084.991525560537	11491.651495511704	0.9217857735100051	0.8016036257341806	1.1871315936772848	0.9929726519680829	0.8968424689577487	0.9070819558218021	0.8267199487907374	0.7821299724741987	0.877592879448131	1.0	13.488298525938298	-7.9894825114832555	2.721907934980369	0.8621160129339329	0.9772498385583652	0.15500246202061307	0.10372007056721409	0.47610326416481696	7.149586595685891	0.03707667808574234	0.04061354260873057	1.0245130353881533e-08	7.9894825114832555	0.1151338256244323	
SATRPS(ph)PS(ph)PERSSTGPEPPAPTPLLAER	ddPTM_K562_Methotrexat_30min_R1	3	SATRPSPSPERSSTGPEPPAPTPLLAER	28	2	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	S(0.237)AT(0.237)RPS(0.549)PS(0.87)PERS(0.089)S(0.012)T(0.005)GPEPPAPTPLLAER;SAT(0.002)RPS(0.903)PS(0.815)PERS(0.216)S(0.028)T(0.035)GPEPPAPTPLLAER;S(0.066)AT(0.066)RPS(0.49)PS(0.737)PERS(0.287)S(0.265)T(0.089)GPEPPAPT(0.001)PLLAER	120.33	3.4732e-14	1938450000.0	5632.66	4305.57	7245.799999999999	6389.5	4722.24	5122.1	5017.69	4977.47	5863.51	6700.3	True	False	5385.055010756646	5016.992260323299	5725.005599715733	5829.342455338725	5343.297331087964	6111.873333061285	6143.034711090473	4802.409558843148	5590.916699919582	5486.8107427655195	0.9814544848037559	0.9143731204759182	1.0434122604400524	1.0624281989359377	0.9738439289405452	1.1139209314117358	1.1196002557934406	0.875264299060293	1.0189738560403836	1.0	12.421752098271478	-6.769231688675865	24.999144862329437	1.0274067486275547	0.9479137978033483	0.17273801252284238	0.06823161429253231	274.9571210378057	882121.4416673142	0.01851880122863368	0.039709475345257816	1.7012506781299927e-07	6.769231688675865	-0.07949295082420638	
SATRPS(ph)PSPERS(ph)STGPEPPAPTPLLAER	ddPTM_K562_Methotrexat_30min_R1	1	SATRPSPSPERSSTGPEPPAPTPLLAER	28	2	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	S(0.154)AT(0.154)RPS(0.347)PS(0.37)PERS(0.423)S(0.423)T(0.129)GPEPPAPTPLLAER	57.673	0.0030553	173080000.0	712.65	444.75	1127.0	969.15	555.1	589.34	612.95	666.99	658.57	855.05	True	False	681.3227593030156	518.2373780425793	890.458101366258	884.1861242024451	628.1053797534494	703.221614202444	750.4196405443355	643.5315836464691	627.9532244450916	700.1921593960958	0.9730511119842377	0.7401359342406097	1.2717338939274376	1.26277638550686	0.8970471481645551	1.0043266048693849	1.0717338525920657	0.9190785343861955	0.8968298430914892	1.0	9.451607096637254	-9.27182989253341	23.35531248916662	0.9309656206245304	1.032247489886721	0.07356211879785957	0.15033990459675256	877.3048213821768	1971939.5300905947	0.08628516899205142	0.04228885000165303	5.347737822741468e-10	9.27182989253341	0.10128186926219074	
SATRPSPS(ph)PERSSTGPEPPAPTPLLAER	ddPTM_K562_Methotrexat_30min_R1	4	SATRPSPSPERSSTGPEPPAPTPLLAER	28	2	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	S(0.001)AT(0.001)RPS(0.038)PS(0.762)PERS(0.113)S(0.042)T(0.042)GPEPPAPTPLLAER;SATRPS(0.016)PS(0.982)PERS(0.001)STGPEPPAPTPLLAER;S(0.011)AT(0.043)RPS(0.036)PS(0.456)PERS(0.151)S(0.151)T(0.151)GPEPPAPTPLLAER;S(0.001)AT(0.001)RPS(0.029)PS(0.719)PERS(0.115)S(0.115)T(0.02)GPEPPAPTPLLAER	79.36	0.00018774	178326000.0	2611.1499999999996	2145.54	3474.91	3522.11	2370.65	2211.78	2362.02	2194.17	2339.0699999999997	3114.62	True	False	2496.3669725027285	2500.054017055594	2745.5738784548544	3213.3320847285504	2682.432027585148	2639.1751821710413	2891.763111768546	2116.9997974326043	2230.327146245321	2550.5321367151228	0.9787631908523393	0.9802087890080302	1.0764709994953954	1.259867318851767	1.0517146555306303	1.0347547259569463	1.1337881495948923	0.8300227889538092	0.8744556142381331	1.0	11.31658256347475	-9.26137249111328	24.99997857259998	0.8891793969657448	1.0749892312082663	0.45484377656577635	0.08604663441948444	5.486957142088882	2051746.9256234781	0.046010032783855424	0.02432684847873243	5.478069134971037e-10	9.26137249111328	0.1858098342425215	
SAVENCQDSWR	ddPTM_K562_Methotrexat_30min_R1	1	SAVENCQDSWR	11	0	P52209-2;P52209	P52209-2	PGD	6-phosphogluconate dehydrogenase, decarboxylating	0		92.611	0.013616999999999999	0.0	604.91	367.58	490.19	549.1	555.0	413.43	374.96	365.47	541.52	609.56	False	True	578.3188806987828	428.3163472082996	387.3058178427025	500.9612555327478	627.992228000657	493.3194963174341	459.0543248527676	352.61621294963186	516.3448533967625	499.16277724283236	1.1585777366917778	0.8580694850167735	0.7759108561379893	1.0036029895895875	1.2580910609349216	0.9882938368167712	0.919648551096684	0.7064152797957757	1.034421789719251	1.0	8.96336654567084	-8.811380409443036	4.696125546653207	0.8877327831958995	1.0013429907954132	0.07214325594909865	0.15147361287201705	0.5246709255879068	24.48197693127335	0.06840780778604698	0.046450985166577745	1.5439015049903817e-09	8.811380409443036	0.11361020759951368	
SAVS(ph)PDLHITPIYEGR	ddPTM_K562_Methotrexat_30min_R1	4	SAVSPDLHITPIYEGR	16	0	A0A0D9SF60;Q99569-2;Q99569	A0A0D9SF60	PKP4	Plakophilin-4	1	S(0.04)AVS(0.96)PDLHITPIYEGR;S(0.043)AVS(0.957)PDLHITPIYEGR;S(0.037)AVS(0.962)PDLHITPIYEGR;SAVS(1)PDLHITPIYEGR	210.08	4.8009e-22	68034000.0	9145.2	7929.4	10386.8	10359.099999999999	7915.2	8151.800000000001	7777.51	8530.0	8581.0	9613.0	True	False	8743.187958153285	9239.598573245254	8206.75262402045	9450.933786540321	8956.187537064498	9727.019979393028	9521.81459911897	8229.995065149975	8182.071182962074	7871.992548125453	1.1106702533954111	1.173730604641574	1.0425254564010877	1.200577074833596	1.1377281523465392	1.2356490329388472	1.2095812516217876	1.0454780050712538	1.039390107770168	1.0	12.942513139639603	-9.367888550795492	5.728970896815092	1.0276521964702183	1.1582934197260875	0.5639212819930146	0.05267693607542525	0.1852596605798059	8.345835002699815	0.03074832177540264	0.014386547505921504	4.2865850917809616e-10	9.367888550795492	0.13064122325586913	
SAVSPDLHITPIY(ph)EGR	ddPTM_K562_Methotrexat_30min_R1	1	SAVSPDLHITPIYEGR	16	0	A0A0D9SF60;Q99569-2;Q99569	A0A0D9SF60	PKP4	Plakophilin-4	1	SAVSPDLHIT(0.165)PIY(0.835)EGR	97.76700000000001	0.0029714000000000003	10074000.0	3146.2	2520.2	3823.5	3739.1	2928.1	2923.3	2600.7	2937.9	3631.3	4136.0	True	False	3007.8968151535105	2936.620213924469	3020.999601219064	3411.298908327261	3313.1964735292295	3488.1863521872	3183.9731775245164	2834.5723917824293	3462.4816555984353	3386.9303213405647	0.8880893699528396	0.8670447677713486	0.891958001670178	1.007194888785622	0.9782298893641984	1.029896106869585	0.9400763746046843	0.8369148824592562	1.0223067282435168	1.0	11.72576259151469	-7.141042433967302	5.873922985708913	0.9676817564206074	0.8782912571884889	0.3844584192780295	0.05263213372560578	0.2665902622085032	11.731664674630103	0.015070817552121907	0.02655636541772184	7.226991867898676e-08	7.141042433967302	-0.0893904992321185	
SAVVAAAAPASVADDT(ph)PPPERR	ddPTM_K562_Methotrexat_30min_R1	1	SAVVAAAAPASVADDTPPPERR	22	1	D6RCN9;D6R966;D6RHG9;D6RHC6;D6RIR8;D6R9V1;E7EV55;D6RDY2;D6RBE0;E7EVI8;Q7LFL8	D6RCN9	CXXC5	CXXC-type zinc finger protein 5	1	SAVVAAAAPAS(0.006)VADDT(0.994)PPPERR	96.53299999999999	5.6296000000000004e-05	22256000.0	1314.2	1303.9	1502.6	1386.0	1067.1	1133.6	1401.7	1281.2	1200.0	1458.6	True	False	1256.4293415786476	1519.347312489532	1187.2247942439558	1264.4915319038223	1207.4423540531545	1352.6521564120721	1716.0669061929923	1236.1394698089273	1144.2122619222105	1194.4334058770187	1.0519040537518356	1.2720234590005826	0.9939648275093496	1.0586538568681132	1.010891313079597	1.1324634339232003	1.4367204548611578	1.0349170273760768	0.9579540025356766	1.0	10.222110705062278	-9.510674621173203	24.982351082625332	0.9847964296305388	1.1360535159475997	0.21158506533852162	0.12600777687317044	951.4287124669687	1947634.7412686618	0.07777833422435215	0.0342030859889463	3.0854987785472494e-10	9.510674621173203	0.15125708631706092	
SAYPPPAPAYALS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	2	SAYPPPAPAYALSSPR	16	0	O14497-2;O14497	O14497-2	ARID1A	AT-rich interactive domain-containing protein 1A	1	SAYPPPAPAYALS(0.902)S(0.098)PR;SAYPPPAPAYALS(0.5)S(0.5)PR	241.66	2.1509999999999994e-64	49511000.0	4916.1	4645.4	5654.8	4661.9	4122.0	3916.5	4158.9	4244.299999999999	4186.0	4985.0	True	False	4699.994130371931	5412.973391700953	4467.934757414301	4253.198465066687	4664.115250123795	4673.308195649156	5091.639192527668	4095.02556330786	3991.3937736719745	4082.168194362358	1.1513474963777377	1.3260044990739213	1.0945004087741173	1.0418969191275678	1.142558323923333	1.144810300100615	1.2472879484876274	1.0031496421346036	0.9777631845704577	1.0	11.995119910485313	-9.34069358040655	7.722119977909478	0.9910845252059817	1.161217231438892	0.5287809918374494	0.07370457675920922	0.26756534572667645	23.314060362688608	0.04340174019147076	0.02070090127910411	4.563587896121606e-10	9.34069358040655	0.17013270623291032	
SAYPPPAPAYALSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	SAYPPPAPAYALSSPR	16	0	O14497-2;O14497	O14497-2	ARID1A	AT-rich interactive domain-containing protein 1A	1	SAYPPPAPAYALS(0.235)S(0.765)PR	125.33	0.00021957	38557000.0	4570.3	3368.9	5096.8	4104.8	4006.1	3424.8	2999.8	4032.0	3691.5	4478.4	True	False	4369.395084322705	3925.553463491055	4027.051331893118	3744.9385571131356	4532.972368636815	4086.59412956957	3672.5815118768205	3890.192274640643	3519.8829707382	3667.318363416727	1.191441443401678	1.070415239279564	1.0980915570529413	1.0211653818961308	1.2360455023091	1.1143276161500788	1.0014351490485789	1.060772992453339	0.959797492863105	1.0	11.840509797885307	-8.756374264083485	22.08210073096125	1.0105657854342982	1.1190990763004187	0.4691778517839871	0.06052130233592582	28.495643461033627	124233.51559127713	0.023754801841094537	0.017761693315465996	1.7523697027264726e-09	8.756374264083485	0.10853329086612051	
SCDEPLT(ph)PPPHS(ph)PTS(ph)MLQLIHDPVSPR	ddPTM_K562_Methotrexat_30min_R1	1	SCDEPLTPPPHSPTSMLQLIHDPVSPR	27	0	I3VM54;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-3	I3VM54	KDM2A	Lysine-specific demethylase 2A	3	S(0.002)CDEPLT(0.959)PPPHS(0.805)PT(0.366)S(0.77)MLQLIHDPVS(0.098)PR	57.802	0.0015765999999999998	36830000.0	970.98	821.67	1520.7	1272.0	868.4	839.37	889.91	1120.7	1412.0	949.9	True	False	928.296881818624	957.4370014980234	1201.525851595092	1160.4857349074032	982.6098212536408	1001.5663730836279	1089.4949707428161	1081.284345781193	1346.3564281951342	777.863905280804	1.1933924115986776	1.2308541314208359	1.5446479049074127	1.4918878829947444	1.2632156018332343	1.2875856127069796	1.4006241494770415	1.390068800519618	1.730838028419776	1.0	9.603373953788852	-8.944988053926556	10.57760608907657	1.4153645764614142	1.343832676582932	0.0	0.19493531250705556	2.2950605701708784	429.49261068495304	0.08088697576757796	0.05449981422547309	1.135042036674681e-09	8.944988053926556	-0.07153189987848219	
SCDEPLT(ph)PPPHS(ph)PTSMLQLIHDPVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	SCDEPLTPPPHSPTSMLQLIHDPVSPR	27	0	I3VM54;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-3	I3VM54	KDM2A	Lysine-specific demethylase 2A	3	S(0.031)CDEPLT(0.969)PPPHS(0.969)PT(0.022)S(0.009)MLQLIHDPVS(1)PR;S(0.026)CDEPLT(0.975)PPPHS(0.791)PT(0.106)S(0.106)MLQLIHDPVS(0.996)PR	61.641999999999996	0.0037503999999999997	20598000.0	4207.8	3469.21	4884.4	4639.3	4216.5	3668.8999999999996	3602.38	4074.0	4118.42	4704.7	True	False	4022.83015027746	4042.437986012584	3859.231189275376	4232.579771977926	4771.043656513096	4377.862999876724	4410.305415946001	3930.7151108348194	3926.955553121392	3852.633240524894	1.0441767744622839	1.0492662378269442	1.001712581587336	1.098619958800248	1.2383851144530629	1.1363300699965593	1.1447509120658284	1.0202671433887351	1.0192913023266061	1.0	11.911629136826024	-9.336882221088652	7.651560623119722	1.0139449236755989	1.1023977412319068	0.3028476336037671	0.06168846562382908	0.4599945585016783	41.64124070316269	0.03905725785952757	0.018629153418185114	4.603814102340568e-10	9.336882221088652	0.08845281755630796	
SCDEPLT(ph)PPPHS(ph)PTSMLQLIHDPVSPR	ddPTM_K562_Methotrexat_30min_R1	2	SCDEPLTPPPHSPTSMLQLIHDPVSPR	27	0	I3VM54;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-3	I3VM54	KDM2A	Lysine-specific demethylase 2A	2	S(0.049)CDEPLT(0.309)PPPHS(0.68)PT(0.474)S(0.475)MLQLIHDPVS(0.013)PR;S(0.117)CDEPLT(0.777)PPPHS(0.369)PT(0.369)S(0.369)MLQLIHDPVSPR	47.714	0.013921000000000001	32752000.0	3468.7	3260.0	4038.3999999999996	4209.2	3013.1	3217.3	3116.9	3727.1	3594.9	4292.6	True	False	3316.220101304107	3798.659589474558	3190.7950280013256	3840.1859712045925	3409.375463403204	3838.9976912707853	3815.944167734135	3596.0157804596097	3427.773883653463	3515.1685438555387	0.9434028724172585	1.0806479240133613	0.9077217744164179	1.0924614064145457	0.9699038384269626	1.0921233628985714	1.0855650646977788	1.0229995334776738	0.9751378464185337	1.0	11.779378149366742	-6.232081149123229	22.940105381798386	1.0265767839209337	0.9434024804860287	0.14373477164565085	0.05978617512986797	6976.454792951178	5451035.696730196	0.01429901652818577	1.2973214168894536	5.860286532109571e-07	6.232081149123229	-0.08317430343490495	
SCDEPLT(ph)PPPHSPTS(ph)MLQLIHDPVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	SCDEPLTPPPHSPTSMLQLIHDPVSPR	27	0	I3VM54;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-3	I3VM54	KDM2A	Lysine-specific demethylase 2A	3	S(0.026)CDEPLT(0.971)PPPHS(0.381)PT(0.269)S(0.461)MLQLIHDPVS(0.892)PR	48.218999999999994	0.0098695	34331000.0	1233.5	1270.5	1713.2	1311.2	1069.3	1323.7	1242.7	1539.9	1309.1	1493.3	True	False	1179.2768169511962	1480.4285301924608	1353.6227322632417	1196.2491317693302	1209.9316926145982	1579.4862909691783	1521.407108743691	1485.7408441763716	1248.2402267353048	1222.8488996271437	0.9643683837886815	1.2106389682681606	1.106941939168422	0.9782477067559827	0.9894367922181685	1.2916446925296954	1.2441497140060231	1.2149831795485	1.0207640756890757	1.0	10.256030434049846	-8.245386105475584	24.9367130842593	1.173359878047486	1.0580405590889328	0.1734330497927853	0.10936160704664458	1330.0955226656392	2066136.0954176136	0.03683919061969072	0.03673980516329129	5.68347422171143e-09	8.245386105475584	-0.1153193189585533	
SCDEPLT(ph)PPPHSPTSMLQLIHDPVSPR	ddPTM_K562_Methotrexat_30min_R1	1	SCDEPLTPPPHSPTSMLQLIHDPVSPR	27	0	I3VM54;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-3	I3VM54	KDM2A	Lysine-specific demethylase 2A	1	S(0.003)CDEPLT(0.388)PPPHS(0.262)PT(0.318)S(0.029)MLQLIHDPVSPR	82.381	0.0022597	14488000.0	2010.8	1881.9	2150.7	2247.8	1776.4	1661.8	1944.9	2158.8	1904.0	2575.2	True	False	1922.407639663937	2192.8519881693765	1699.29746105449	2050.7388639346395	2010.0277366132743	1982.9193309152972	2381.0933337053216	2082.873780380513	1815.4834555832392	2108.806325801796	0.9116093859084059	1.0398546141194949	0.8058101117504921	0.9724642983299671	0.9531590037549016	0.9403041458353768	1.12911902082805	0.9877027372765381	0.8609057329591272	1.0	11.042210887790072	-8.579091780348362	24.999990007161557	0.999307698009656	0.9380117326549181	0.10514649026947742	0.08130435577018519	198.84557868922488	88431.83576600373	0.031093037305906585	0.024084564411404292	2.6357743033443504e-09	8.579091780348362	-0.061295965354737914	
SCDEPLTPPPHS(ph)PTSMLQLIHDPVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	SCDEPLTPPPHSPTSMLQLIHDPVSPR	27	0	I3VM54;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-3	I3VM54	KDM2A	Lysine-specific demethylase 2A	2	S(0.001)CDEPLT(0.027)PPPHS(0.567)PT(0.327)S(0.349)MLQLIHDPVS(0.73)PR	55.777	0.0095662	12622000.0	2252.8	2170.5	2438.7	2361.6	1848.5	1638.9	1632.5	2371.7	2219.5	2727.0	True	False	2153.769609426555	2529.1382328081363	1926.8501968073579	2154.562194620539	2091.6101503769632	1955.5942300138893	1998.6296813583936	2288.2859667076436	2116.315929446955	2233.113874829721	0.9644692255520482	1.1325612461213996	0.8628535331429453	0.9648241493214617	0.9366338967091198	0.8757252606130561	0.894996759406545	1.0247063495058573	0.9476972729876249	1.0	11.124841106115019	-6.764702622887451	24.999999957884096	0.9363999360058654	1.0485152275940823	0.33919449949051295	0.06140914116338159	82.07529514928758	628806.6926066914	0.015575217236281554	0.034755128220558505	1.71908510388192e-07	6.764702622887451	0.11211529158821698	
SCDEPLTPPPHS(ph)PTSMLQLIHDPVSPR	ddPTM_K562_Methotrexat_30min_R1	2	SCDEPLTPPPHSPTSMLQLIHDPVSPR	27	0	I3VM54;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-3	I3VM54	KDM2A	Lysine-specific demethylase 2A	1	SCDEPLT(0.011)PPPHS(0.714)PT(0.205)S(0.07)MLQLIHDPVSPR;S(0.001)CDEPLT(0.022)PPPHS(0.608)PT(0.184)S(0.184)MLQLIHDPVS(0.001)PR	104.38	4.2418999999999996e-10	18299800.0	2366.06	2221.0	2828.6000000000004	2670.9	2308.0	1930.3899999999999	2141.05	2311.81	2630.4	2794.1	True	False	2262.050835440249	2587.9824994549053	2234.9155151061204	2436.746343839768	2611.542454460388	2303.410547120942	2621.2349643322427	2230.502331953617	2508.113278133483	2288.0614146174257	0.9886320450093663	1.131080871746455	0.9767725205399735	1.064982927587721	1.1413777784881047	1.0067083568672839	1.1456139016139675	0.9748437335221473	1.0961739322687067	1.0	11.159910061155523	-5.971644551047266	11.410430829121545	1.0600851046993622	0.8381305865244659	0.09994612112893275	0.06399754388356964	64623.414067731974	876482.6703190589	0.014702899168232975	246926.39619454384	1.0674694357167952e-06	5.971644551047266	-0.2219545181748963	
SCDEPLTPPPHSPT(ph)S(ph)MLQLIHDPVSPR	ddPTM_K562_Methotrexat_30min_R1	1	SCDEPLTPPPHSPTSMLQLIHDPVSPR	27	0	I3VM54;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-3	I3VM54	KDM2A	Lysine-specific demethylase 2A	2	S(0.001)CDEPLT(0.029)PPPHS(0.49)PT(0.557)S(0.561)MLQLIHDPVS(0.362)PR	48.388999999999996	0.015908000000000002	13643000.0	2106.9	1958.1	2469.0	2155.0	1706.4	1703.2	1822.6	2216.4	2101.9	2554.9	True	False	2014.2831987308275	2281.6427429908376	1950.7906408813583	1966.0744958533453	1930.8215096582348	2032.3192949903323	2231.364445478595	2138.4479557325203	2004.1831277785773	2092.1828525128176	0.9627663262374851	1.090556086075588	0.932418807724363	0.93972402722448	0.9228741681632752	0.9713870336664953	1.0665245835461337	1.022113317277281	0.9579387984044759	1.0	11.030793230360379	-8.58368164836942	24.99997301273406	1.014268394604978	0.9700983595560555	0.1407543874509578	0.050304232582195005	150.329854378197	61808.34971227271	0.020389369583392866	0.015793538944616638	2.6080646435759045e-09	8.58368164836942	-0.044170035048922474	
SCDEPLTPPPHSPT(ph)SMLQLIHDPVSPR	ddPTM_K562_Methotrexat_30min_R1	2	SCDEPLTPPPHSPTSMLQLIHDPVSPR	27	0	I3VM54;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-3	I3VM54	KDM2A	Lysine-specific demethylase 2A	1	S(0.001)CDEPLT(0.003)PPPHS(0.102)PT(0.447)S(0.447)MLQLIHDPVSPR;SCDEPLTPPPHS(0.253)PT(0.373)S(0.373)MLQLIHDPVSPR	84.156	0.0014899000000000002	37734000.0	2982.7	3164.7	3569.0	3644.5	3046.2	2979.1	2816.44	3519.2000000000003	3555.7	4021.2	True	False	2851.584079384136	3687.6128842975845	2819.9156732707856	3324.992343451285	3446.828693577659	3554.7689124622475	3448.0983643277405	3395.4277412984534	3390.396283097334	3292.9217137753108	0.8659738454926145	1.1198604779673802	0.8563567307033767	1.009739262716697	1.0467387302766744	1.0795181973478292	1.04712430602382	1.0311292027060128	1.029601241023817	1.0	11.68515249823802	-7.514490486645364	23.601659726638548	1.0416629648242832	0.9593774707204207	0.2514662432470649	0.06969444879618292	271.5672613356552	764097.4634001391	0.019036134125343763	0.02588061163032124	3.058507243321679e-08	7.514490486645364	-0.08228549410386254	
SCDEPLTPPPHSPTS(ph)MLQLIHDPVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	SCDEPLTPPPHSPTSMLQLIHDPVSPR	27	0	I3VM54;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-3	I3VM54	KDM2A	Lysine-specific demethylase 2A	2	S(0.001)CDEPLT(0.045)PPPHS(0.259)PT(0.334)S(0.385)MLQLIHDPVS(0.976)PR	53.728	0.0055798	17465000.0	1949.8	1782.2	1939.9	1833.1	2035.8	1614.7	1639.4	2011.6	1863.8	2385.0	True	False	1864.0891266245999	2076.678257779617	1532.7415003020444	1672.3949690713537	2303.543383358084	1926.7179225110908	2007.0771820024208	1940.8508878142666	1777.152344808845	1953.053388877479	0.9544486275902517	1.0632982537017033	0.7847924224862027	0.8562976202266369	1.179457456962838	0.986515746821686	1.0276611962748199	0.9937520903766867	0.9099353632264332	1.0	10.93151567209263														
SCDEPLTPPPHSPTS(ph)MLQLIHDPVSPR	ddPTM_K562_Methotrexat_30min_R1	1	SCDEPLTPPPHSPTSMLQLIHDPVSPR	27	0	I3VM54;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-3	I3VM54	KDM2A	Lysine-specific demethylase 2A	1	S(0.001)CDEPLT(0.049)PPPHS(0.019)PT(0.202)S(0.728)MLQLIHDPVSPR	68.238	0.0054256	19245000.0	792.67	555.39	889.31	754.56	683.66	739.2	701.99	751.97	666.43	930.09	True	False	757.8251759162583	647.1587574841333	702.655984140219	688.4088963299764	773.5732731440162	882.039938267293	859.4291271159435	725.5227888793462	635.4478147606817	761.6416882436289	0.9949890973849245	0.8496892534552605	0.9225545226661201	0.9038487611116328	1.0156656142705396	1.1580772847417353	1.1283903446748242	0.9525775703696392	0.8343133320683188	1.0	9.572968636089108	-5.900735819563924	20.080141531746264	0.9770924451794848	2.7612702569935195	0.0029807604061861115	0.10159560204975696	9733.55613273095	1849858.4507958514	0.02751156179724025	48099.56136042213	1.2567942365560274e-06	5.900735819563924	1.7841778118140348	
SCFES(ph)SPDPELK	ddPTM_K562_Methotrexat_30min_R1	1	SCFESSPDPELK	12	0	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	SCFES(0.5)S(0.5)PDPELK	239.48	1.1480000000000002e-47	699630000.0	9316.7	7550.9	15188.0	9509.6	7035.2	6403.6	6952.7	8966.0	8390.4	11206.0	True	False	8907.14902350159	8798.557881645225	12000.246356300553	8675.908132606479	7960.452112486885	7641.005071277648	8512.019960539354	8650.660698022828	8000.33213536009	9176.484811639837	0.9706493506318878	0.958815718899765	1.3077171272684873	0.9454500618364882	0.8674838215162209	0.832672338931513	0.927590481024101	0.9426987431014944	0.871829714708636	1.0	13.163725898429945	-7.503647287272976	24.97920564618192	0.9019418333031534	1.0769608001581044	0.3787100583841244	0.09865880955226294	773.6067753093554	1004817.00593928	0.028083853650061764	0.040926280787765286	3.1358314592816724e-08	7.503647287272976	0.175018966854951	
SCFES(ph)SPDPELKSR	ddPTM_K562_Methotrexat_30min_R1	1	SCFESSPDPELKSR	14	1	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	SCFES(0.5)S(0.5)PDPELKSR	72.66199999999999	0.03282	44566000.0	4623.8	3742.7	6741.0	7351.7	3149.4	3237.0	3171.2	3761.2	4034.1	6264.1	True	False	4420.543288381793	4361.11755997743	5326.1562212155695	6707.187875250595	3563.601302459942	3862.5044374610757	3882.422324976256	3628.9164641315456	3846.55557151699	5129.610789629943	0.8617697267243734	0.8501848851366843	1.0383158566304804	1.3075432328725396	0.6947118307034412	0.7529819699517051	0.7568648936923222	0.7074447970726724	0.7498727933302881	1.0	12.324633649836985	-7.8341649035741225	24.99999999994626	0.7601452231767165	1.0044684096731888	0.3975422630706785	0.14210045011524525	43.49991262779463	14952.294426231967	0.045346999375428805	0.05141868104512948	1.4649914714634871e-08	7.8341649035741225	0.24432318649647233	
SCFESS(ph)PDPELK	ddPTM_K562_Methotrexat_30min_R1	2	SCFESSPDPELK	12	0	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	SCFES(0.05)S(0.95)PDPELK;SCFES(0.054)S(0.946)PDPELK	256.96	1.6054e-87	996190000.0	15394.1	11349.400000000001	22960.7	15513.800000000001	11297.8	10276.400000000001	9000.1	14547.4	13517.6	17609.8	True	False	14717.39379637488	13224.695443184828	18141.562846530833	14153.729240728364	12783.658727037513	12262.168860403153	11018.601528449419	14035.759696455183	12889.169726466387	14420.494577549096	1.0205886987598898	0.9170764131608927	1.2580402668556856	0.9815009578633973	0.8864923916645736	0.8503292861739856	0.7640931778861455	0.9733202714355652	0.8938091309665073	1.0	13.815833024873085	-7.5927706472969065	4.622959637746454	0.8858412185468059	1.0604796075757468	0.3694622743088345	0.09932885816442395	0.21608536158009387	8.906712272147342	0.030002135753441374	0.039566473482469056	2.5540497507531635e-08	7.5927706472969065	0.1746383890289409	
SCFESS(ph)PDPELKSR	ddPTM_K562_Methotrexat_30min_R1	1	SCFESSPDPELKSR	14	1	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	SCFES(0.425)S(0.575)PDPELKSR	86.777	0.015541999999999999	59850000.0	4436.6	2803.0	5883.0	5751.7	2554.2	2751.3	2684.2	3326.5	3125.3	5090.4	True	False	4241.572376234842	3266.148107146376	4648.238695951816	5247.457391090344	2890.122069836535	3282.949786464834	3286.2001780717924	3209.5051095218496	2980.005485154569	4168.479233015475	1.017534726487408	0.7835346956457419	1.1150922041632156	1.258842157477737	0.69332768817606	0.7875653452853957	0.7883451000653199	0.7699462873898248	0.7148903277608115	1.0	12.025305432564103	-7.78374919447302	24.99938829085817	0.7804040274776508	1.030260008303738	0.4536199372204194	0.13446272812361187	224.1430353254602	251163.37100441873	0.042883057041822686	0.04866119140587102	1.645321623898655e-08	7.78374919447302	0.2498559808260873	
SCGTDSQSENEAS(ph)PVKRPR	ddPTM_K562_Methotrexat_30min_R1	1	SCGTDSQSENEASPVKRPR	19	2	H0Y398;C9JQ48;Q9H8U3	H0Y398	ZFAND3	AN1-type zinc finger protein 3	1	SCGTDSQS(0.001)ENEAS(0.998)PVKRPR	77.1	0.032557	4256600.0	1291.5	943.67	1648.2	1556.8	820.65	1046.6	908.18	1377.7	1098.0	1687.3	True	False	1234.727206398435	1099.595427852593	1302.2653439856845	1420.3177610879288	928.5798592950255	1248.840637703665	1111.8624833176507	1329.2455101122061	1046.9542196588225	1381.7136197287089	0.8936202037589137	0.7958200687552692	0.9425001862841711	1.0279393217292014	0.6720494363204921	0.9038346440768726	0.8046982149137085	0.9620267840836624	0.7577215746519063	1.0	10.432242911813082	-12.245225636763223	3.8031233613565814	1.0001622991156194	0.8643970578013719	0.14381080594210915	0.10071299402547598	159087042.59722942	297483191.8018321	347999.30741868983	0.02419904121449501	5.685574612900496e-13	12.245225636763223	-0.1357652413142475	
SCILRPGGS(ph)EDAS(ph)AMLRRFLGR	ddPTM_K562_Methotrexat_30min_R1	1	SCILRPGGSEDASAMLRRFLGR	22	3	K7EL02;K7EP46;P52888-2;P52888	K7EL02	THOP1	Thimet oligopeptidase	2	SCILRPGGS(1)EDAS(1)AMLRRFLGR	58.672	0.009816799999999999	64472000.0	2081.7	2006.5	2400.2	2385.7	2306.7	2017.2	1940.1	2505.9	2317.7	2364.3	True	False	1990.1909605571987	2338.0400203315007	1896.4308206737273	2176.5493850382027	2610.071481674079	2406.995351018378	2375.216811518173	2417.7660766423587	2209.950632880923	1936.1023594645806	1.0279368499440165	1.2076014519077773	0.9795095860521423	1.1241912775934617	1.3481061416586886	1.2432169917317908	1.2268033246832195	1.2487800889365064	1.141443076125414	1.0	10.918939512888338	-6.254306874267453	23.289294714344035	1.1790488522443856	1.0279366583195395	0.12648403334034852	0.10814530323635825	670.4596467616673	2189057.538097325	0.027957615530824535	0.2611063904175453	5.567921782553667e-07	6.254306874267453	-0.1511121939248461	
SCLAKGS(ph)PER	ddPTM_K562_Methotrexat_30min_R1	1	SCLAKGSPER	10	1	A0A0G2JHC2;Q6NYC8;Q6NYC8-4;Q6NYC8-3	A0A0G2JHC2	PPP1R18	Phostensin	1	SCLAKGS(1)PER	116.03	0.0075615	5956900.0	2158.5	1841.9	3407.7	2715.8	1682.3	1871.3	1695.5	2089.4	1919.1	3173.9	True	False	2063.614924514923	2146.2426680531244	2692.4703389758606	2477.710030551516	1903.551937235145	2232.9022409085305	2075.7590350647192	2015.914617716807	1829.8814598790934	2599.07595428018	0.7939802302108735	0.8257714302341468	1.0359336881024495	0.9533042027768377	0.732395655502241	0.8591138851603657	0.7986527025677498	0.7756274357419151	0.7040507826889896	1.0	11.343783079788935	-7.753718370892724	24.999660730526827	0.8021457681228935	0.9063338401967479	0.16632849698115704	0.09783189106531075	291.3061738529513	943207.782309866	0.029307487617908343	0.03711822708027888	1.763119014353435e-08	7.753718370892724	0.10418807207385439	
SCLIHTS(ph)EKK	ddPTM_K562_Methotrexat_30min_R1	1	SCLIHTSEKK	10	1	Q13433-2;Q13433	Q13433-2	SLC39A6	Zinc transporter ZIP6	1	SCLIHT(0.007)S(0.993)EKK	75.21300000000001	0.033826	58901000.0	1323.5	1506.7	1659.1	1409.3	1285.2	1333.2	1350.6	1256.1	1211.9	1287.8	True	False	1265.3205247141543	1755.6565654789297	1310.8775829429972	1285.748857079406	1454.2263268944935	1590.8220315177975	1653.5064304089724	1211.922251035742	1155.559033519605	1054.5669409628576	1.1998484643932334	1.6648128224804315	1.2430482428608265	1.2192197641863027	1.3789796269990526	1.5085073974207077	1.567948288706321	1.1492132020838937	1.0957664123858633	1.0	10.042434960950557	-9.438337145556027	5.4855218501177045	1.069487129943802	1.3980204964946938	0.501258006065455	0.14623466261598375	0.18955666133747723	9.275510640483784	0.08598974401636485	0.03945789809068447	3.6447089600850325e-10	9.438337145556027	0.3285333665508918	
SCS(ph)ASCVPHGAK	ddPTM_K562_Methotrexat_30min_R1	1	SCSASCVPHGAK	12	0	P00519-2;P00519	P00519-2	ABL1	Tyrosine-protein kinase ABL1	1	S(0.001)CS(0.632)AS(0.367)CVPHGAK	138.89	4.9512e-06	6929100.0	3918.0	2734.8	5025.0	3594.4	2577.4	2491.2	2095.1	3325.6	3244.2	3926.4	True	False	3745.769411280738	3186.679216348164	3970.321170688062	3279.2845326660167	2916.3732764844904	2972.589142602111	2564.9795071448525	3208.6367630319764	3093.377850106695	3215.2909124060907	1.1649861593636253	0.9911013663032701	1.2348248661944439	1.0199029021022668	0.9070324757339261	0.9245163885894359	0.7977441472707699	0.9979304673961416	0.9620833493389359	1.0	11.650733559975297	-7.536102813715472	4.896505024680412	0.9261124376176532	1.1189077382420312	0.5635885122465182	0.07803324669041335	0.1340831415764844	8.838438596295964	0.022699614111006947	0.030987838609951468	2.910028124230256e-08	7.536102813715472	0.192795300624378	
SCS(ph)ASCVPHGAKDTEWR	ddPTM_K562_Methotrexat_30min_R1	2	SCSASCVPHGAKDTEWR	17	1	P00519-2;P00519	P00519-2	ABL1	Tyrosine-protein kinase ABL1	1	S(0.019)CS(0.667)AS(0.288)CVPHGAKDT(0.026)EWR;S(0.019)CS(0.735)AS(0.246)CVPHGAKDTEWR	90.22	0.0046779	54182000.0	1790.76	1646.6100000000001	2749.1	2166.2	1423.18	1487.16	1402.8899999999999	1800.91	1798.03	2458.5	True	False	1712.0403345954805	1918.6843149155507	2172.101478674337	1976.2926092424675	1610.3531153981523	1774.5326225562612	1717.5237939852223	1737.570974534494	1714.4399777533267	2013.2418266479156	0.8503898100736657	0.9530322137754286	1.0789073870429793	0.9816469055448896	0.7998806174613508	0.8814304367552757	0.8531135064111651	0.8630711678723572	0.8515817399879381	1.0	10.97530476102037	-7.739659531140804	24.991137963261398	0.8672423727256166	0.973133515860331	0.281214132616339	0.07039634556465449	277.922095345622	318898.5233557657	0.020821468196383777	0.02685619745528604	1.8211279879336074e-08	7.739659531140804	0.10589114313471448	
SCS(ph)IDRSPGAGSLGSPASQR	ddPTM_K562_Methotrexat_30min_R1	1	SCSIDRSPGAGSLGSPASQR	20	1	E9PC47;P53667-4;P53667-2;P53667	E9PC47	LIMK1	LIM domain kinase 1	1	S(0.015)CS(0.93)IDRS(0.02)PGAGS(0.035)LGS(0.001)PASQR	107.63	0.00046035	6668600.0	1014.0	743.73	1277.9	1270.7	819.12	925.29	708.99	1042.4	924.23	958.77	True	False	969.4257741293181	866.618741251507	1009.6862535367704	1159.2997038890232	926.8486374772938	1104.0891970770351	867.9990553055362	1005.7382011620559	881.2627490303034	785.1274623287463	1.2347368047143954	1.1037936931680514	1.2860157133492263	1.476575154371055	1.1805072194624193	1.4062547166573751	1.105551769557247	1.2809871637644183	1.122445451616751	1.0	9.61678307860947	-10.076868428797837	1.0337266948061794	0.9987625214660767	1.2682732558612189	0.3517487205562926	0.11240125283806461	0.7227151361494174	1.7027775607339115	0.1077888836415697	0.0353847136586938	8.377830533184028e-11	10.076868428797837	0.26951073439514217	
SCS(ph)LDLGDAGCYGYAR	ddPTM_K562_Methotrexat_30min_R1	1	SCSLDLGDAGCYGYAR	16	0	Q6PJG9	Q6PJG9	LRFN4	Leucine-rich repeat and fibronectin type-III domain-containing protein 4	1	S(0.041)CS(0.959)LDLGDAGCYGYAR	182.37	9.806100000000001e-08	8561300.0	730.0	585.97	1205.9	854.24	659.91	709.0	702.2	860.59	899.49	786.22	True	False	697.9100740773192	682.7915827130079	952.7980695985535	779.3501054931606	746.6997318556996	846.0042156811568	859.6862249616321	830.3225619129444	857.6729062303403	643.8279393724323	1.08400091297312	1.0605187208535174	1.479895498985782	1.2104943849638272	1.159781497807537	1.3140222160998398	1.3352732498679794	1.2896653144973744	1.3321461430616885	1.0	9.330531374728626	-6.693079726251088	24.999998959292977	1.274040641066879	1.072256518317698	0.2905788416287506	0.11992167625588536	58.7585075245293	21487.056429509357	0.02888708894647299	0.07642803842743967	2.0273105188352918e-07	6.693079726251088	-0.201784122749181	
SCS(ph)SLAVVEK	ddPTM_K562_Methotrexat_30min_R1	1	SCSSLAVVEK	10	0	Q8IW36	Q8IW36	ZNF695	Zinc finger protein 695	1	S(0.348)CS(0.643)S(0.009)LAVVEK	117.53	0.0025243	7593800.0	209.82	273.62	143.47	156.17	159.98	212.62	189.29	238.58	0.0	177.8	True	False	200.59656403137416	318.8310542552233	113.35760763355547	142.47881856956704	181.02017411809922	253.7058058365692	231.74310100112115	230.1890061715687	0.0	145.59869708277384	1.3777359828799407	2.189793319880917	0.7785619645285075	0.978572071208624	1.2432815522736995	1.742500523149158	1.5916564203138002	1.580982596572995	0.0	1.0	7.185853635142163	-9.74766424096456	24.99978365538081	0.49999989373583054	1.4324540692558934	0.4255741510241693	0.4346795190239706	194.14084702830277	352340.2647761269	0.30255577787233984	0.11303865528415456	1.7878692669938646e-10	9.74766424096456	0.9324541755200628	
SCT(ph)PSPDQIS(ph)HR	ddPTM_K562_Methotrexat_30min_R1	1	SCTPSPDQISHR	12	0	Q7Z2W4-2;Q7Z2W4;C9J6P4;Q7Z2W4-3	Q7Z2W4-2	ZC3HAV1	Zinc finger CCCH-type antiviral protein 1	2	S(0.023)CT(0.977)PS(0.121)PDQIS(0.879)HR	141.65	3.394e-05	427250000.0	2580.0	1952.2	3290.0	3061.0	2086.2	2151.5	1682.9	2610.3	2483.2	2922.3	True	False	2466.586289204771	2274.767868273689	2599.4739605101922	2792.646882509091	2360.571866765713	2567.2469253004356	2060.333164323454	2518.4942694678743	2367.75657400436	2393.0431523340285	1.0307320562936833	0.9505753651182676	1.0862628858049734	1.166985593128696	0.9864309653017979	1.0727959179492854	0.8609678276440317	1.052423257395709	0.9894332961338347	1.0	11.224630697040794														
SCTPS(ph)PDQISHR	ddPTM_K562_Methotrexat_30min_R1	2	SCTPSPDQISHR	12	0	Q7Z2W4-2;Q7Z2W4;C9J6P4;Q7Z2W4-3	Q7Z2W4-2	ZC3HAV1	Zinc finger CCCH-type antiviral protein 1	1	SCT(0.003)PS(0.996)PDQISHR;S(0.013)CT(0.077)PS(0.909)PDQISHR	118.47	0.00097724	28886000.0	4250.6	3679.3	5916.8	5175.4	4295.5	3986.0	4237.9	4763.6	4042.7	5123.4	True	False	4063.74871352473	4287.24178759317	4674.944537856146	4721.68071732687	4860.433541219495	4756.238087031155	5188.356953524495	4596.061487965817	3854.755759394099	4195.50261323894	0.9685963966990606	1.0218660748928496	1.1142752058130825	1.1254147959359078	1.1584865960713169	1.1336515610841977	1.2366472939744086	1.0954733941680574	0.9187828288392405	1.0	12.034627937804352	-6.61241193529785	3.022094837469642	1.1109751008764777	0.9745771460833368	0.19590634012691754	0.08275213741499986	0.3741302330133858	6.512635703935034	0.022396814084774463	0.08260128530137052	2.441114018342607e-07	6.61241193529785	-0.13639795479314087	
SCTPSPDQIS(ph)HRASLEDAPVDDLTR	ddPTM_K562_Methotrexat_30min_R1	2	SCTPSPDQISHRASLEDAPVDDLTR	25	1	Q7Z2W4-2;Q7Z2W4;C9J6P4;Q7Z2W4-3	Q7Z2W4-2	ZC3HAV1	Zinc finger CCCH-type antiviral protein 1	1	SCT(0.001)PS(0.009)PDQIS(0.495)HRAS(0.495)LEDAPVDDLTR;SCTPSPDQIS(0.993)HRAS(0.007)LEDAPVDDLTR	87.74799999999999	0.00014716	69789000.0	2165.95	1978.11	2625.41	2792.51	2237.63	1881.62	2142.19	2176.74	2342.63	2630.98	True	False	2070.7374314353024	2304.9590553789903	2074.3723193504757	2547.6949839514728	2531.9175660200162	2245.2164348518736	2622.630638351692	2100.1828204120216	2233.7216426223554	2154.4840272825445	0.9611291637409483	1.0698427215941073	0.9628162906210477	1.1825081790765866	1.175185118087661	1.0421132885741418	1.2172894322450012	0.974796189629211	1.0367780008282323	1.0	11.073126687428934	-7.242637619969052	24.903583830288213	1.095641450433664	1.0051207262307595	0.20636729713224355	0.08164934605998123	1317.734487664131	1745382.9938805248	0.022272117699897367	0.038494626881409484	5.719556836499082e-08	7.242637619969052	-0.09052072420290447	
SCTPSPDQISHRAS(ph)LEDAPVDDLTR	ddPTM_K562_Methotrexat_30min_R1	2	SCTPSPDQISHRASLEDAPVDDLTR	25	1	Q7Z2W4-2;Q7Z2W4;C9J6P4;Q7Z2W4-3	Q7Z2W4-2	ZC3HAV1	Zinc finger CCCH-type antiviral protein 1	1	SCTPSPDQIS(0.186)HRAS(0.813)LEDAPVDDLTR;SCTPSPDQISHRAS(1)LEDAPVDDLTR	125.35	2.8776e-10	117862000.0	1881.35	1749.2	2102.37	2089.1	1847.0900000000001	1386.42	1688.4099999999999	2001.9699999999998	1916.3899999999999	2475.8	True	False	1798.6481066648844	2038.22556868371	1661.1112675859613	1905.951846536994	2090.014710662583	1654.3260433070097	2067.0789220841198	1931.5595803726028	1827.297447187586	2027.408629007489	0.8871660507558392	1.0053353524896047	0.8193273145922993	0.9400925986341718	1.0308798536019563	0.8159805673298725	1.019566994294609	0.9527233694956656	0.9012970651516528	1.0	10.985421181374344	-15.999999999184775	0.14398054731843593	1.2293823564261595	0.910086322094865	0.07982545587938938	0.07228012835660834	389.60477381658677	3.391170214821395	25.747368641677316	0.3991755340204407	1.0000000018771254e-16	15.999999999184775	-0.3192960343312945	
SDAEEDGGT(ph)VSQEEEDRKPK	ddPTM_K562_Methotrexat_30min_R1	1	SDAEEDGGTVSQEEEDRKPK	20	2	P27824-3;P27824;P27824-2	P27824-3	CANX	Calnexin	1	SDAEEDGGT(0.524)VS(0.476)QEEEDRKPK	94.671	0.00055213	16223000.0	2328.8	1555.8	4580.3	2342.2	1629.3	1585.4	959.65	1879.5	2011.0	3383.7	True	False	2226.4287404263855	1812.8695059216295	3618.9576235029926	2136.8629625000935	1843.5815082549	1891.7561121874553	1174.8759410202651	1813.396919689258	1917.5090489379704	2770.8791412766127	0.8035098706617043	0.6542578775508756	1.3060683772139008	0.7711859137658338	0.6653417252278698	0.6827277610224012	0.4240083674234058	0.6544482192225032	0.6920219003325155	1.0	11.436128070153577	-7.517494964787274	23.84381735401619	0.6615160960181539	0.9185850107750599	0.2080985656815918	0.201415213942461	181.0481744796233	801833.455084502	0.05855465649024299	0.07807856687507336	3.037421307622103e-08	7.517494964787274	0.2570689147569061	
SDAGLES(ph)DTAMK	ddPTM_K562_Methotrexat_30min_R1	2	SDAGLESDTAMK	12	0	Q9NR30	Q9NR30	DDX21	Nucleolar RNA helicase 2	1	SDAGLES(0.817)DT(0.183)AMK;SDAGLES(0.788)DT(0.212)AMK	124.47	0.00060981	49599000.0	10603.1	7226.1	12632.7	9882.2	6349.6	6213.8	6190.6	7425.799999999999	8775.7	11086.7	True	False	10137.000419793461	8420.09020230125	9981.26890605992	9015.842869105307	7184.6836953386855	7414.528907474717	7578.999635783929	7164.630405016492	8367.719622458952	9078.791197680477	1.1165583830569143	0.9274461785675259	1.0994050517000562	0.9930664416435468	0.791370077678875	0.8166867973975479	0.8348027254685925	0.7891612714748819	0.921677725620213	1.0	13.148284506274614	-7.639868543571854	5.268407062696778	0.8456782202647345	1.0371313479873498	0.5559804024542498	0.07696299039150566	0.14271992419064725	6.0067891464786785	0.021631255209801224	0.02806142614403525	2.2915611795647197e-08	7.639868543571854	0.19145312772261536	
SDEDYLYREELAQFHR	ddPTM_K562_Methotrexat_30min_R1	1	SDEDYLYREELAQFHR	16	1	E7EMD0;H0Y4R2;P16435	E7EMD0	POR	NADPH--cytochrome P450 reductase	0		103.3	0.004412	5054600.0	2059.1	1664.4	2402.2	2200.7	1953.2	1951.0	1658.5	2237.5	2159.5	2424.5	False	True	1968.5844294967246	1939.4138100372556	1898.0110480053463	2007.7680478071716	2210.080035551139	2328.0031379322104	2030.4608432054479	2158.805856772928	2059.105316350843	1985.3995561146521	0.9915306082515531	0.9768380395090906	0.9559844224603729	1.0112664937511588	1.113166379404344	1.1725615283646078	1.0226963318048579	1.0873407572416431	1.037123892774727	1.0	10.955213659596085	-7.580647612714974	5.071078797213418	1.0786670403751728	0.9760086535705079	0.470132367071597	0.04672231362026779	0.16574584750371862	8.776146572301334	0.014157463902434742	0.01863461331067664	2.626348702887207e-08	7.580647612714974	-0.10265838680466488	
SDEEDEDS(ph)DFGEEQR	ddPTM_K562_Methotrexat_30min_R1	2	SDEEDEDSDFGEEQR	15	0	Q5VW52;Q9HCL2	Q5VW52	GPAM	Glycerol-3-phosphate acyltransferase 1, mitochondrial	1	S(0.04)DEEDEDS(0.96)DFGEEQR;S(0.002)DEEDEDS(0.998)DFGEEQR	127.05	0.00039044	12822900.0	1726.15	1739.43	2135.1499999999996	1791.5500000000002	1267.81	1782.8200000000002	1820.73	1789.8	2102.3199999999997	1853.83	True	False	1650.2705128336513	2026.8412422453146	1687.011193551167	1634.487593060817	1434.5492370838067	2127.324733146234	2229.0750503765184	1726.851719531702	2004.58360207025	1518.0834230200146	1.087074984028657	1.335131661086976	1.111277000966847	1.0766783750324027	0.9449739160117905	1.4013226815389492	1.4683481925796182	1.1375209644911162	1.3204699897732968	1.0	10.568035357806977	-8.275205084746817	24.933437888795595	1.2868034060428746	1.1215830371325686	0.1969418843485341	0.1522679652618831	1242.090341195822	2249755.8896750235	0.05414261371550516	0.04799157007688549	5.306338064647816e-09	8.275205084746817	-0.165220368910306	
SDGS(ph)LEDGDDVHR	ddPTM_K562_Methotrexat_30min_R1	1	SDGSLEDGDDVHR	13	0	Q9NRX5	Q9NRX5	SERINC1	Serine incorporator 1	1	SDGS(1)LEDGDDVHR	161.87	3.0055999999999998e-05	4279900.0	881.31	938.38	1592.1	1232.6	881.86	650.1	778.51	900.28	783.11	983.45	True	False	842.5686676507972	1093.4313452672193	1257.9399673338232	1124.539871734957	997.8400471795657	775.7226242797183	953.1106849827404	868.6166421164388	746.7033870282517	805.3376751746565	1.0462302877709855	1.3577302775883207	1.562003127521644	1.3963582065014826	1.2390331136105863	0.9632265423463325	1.1834919864838507	1.0785744525463294	0.9271929155261628	1.0	9.653450016670222	-8.054290694665545	4.055848427681447	1.0461899067223994	1.355485609319951	0.5392855405582062	0.13559790100414645	0.1881257520260429	6.326007320698746	0.047691325010544044	0.04943362898108144	8.824890093688825e-09	8.054290694665545	0.30929570259755157	
SDGSGFGARLS(ph)PGSGGPEAQTAGPVTPASISGR	ddPTM_K562_Methotrexat_30min_R1	2	SDGSGFGARLSPGSGGPEAQTAGPVTPASISGR	33	1	O95613-2;O95613	O95613-2	PCNT	Pericentrin	1	S(0.052)DGS(0.015)GFGARLS(0.692)PGS(0.239)GGPEAQT(0.001)AGPVTPASISGR;S(0.215)DGS(0.046)GFGARLS(0.542)PGS(0.197)GGPEAQTAGPVTPASISGR	63.848	0.0001525	29375000.0	1012.66	905.5699999999999	945.5400000000001	1269.18	1004.1100000000001	810.53	776.51	1133.13	937.1	1358.38	True	False	968.144678924847	1055.2000504418636	747.0840755686352	1157.9129599290718	1136.1680649689	967.1534512497149	950.6621340714277	1093.2771756358013	893.5344255394197	1112.3642190286741	0.8703486343440991	0.9486102055343647	0.6716182189148401	1.0409476861276348	1.0213993272464403	0.8694575344164175	0.8546320690731619	0.9828410128028572	0.8032750516909484	1.0	10.119413528615997														
SDIS(ph)PLTPR	ddPTM_K562_Methotrexat_30min_R1	1	SDISPLTPR	9	0	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	S(0.028)DIS(0.96)PLT(0.012)PR	92.866	0.011913	29469000.0	2273.9	2043.8	2786.3	2360.5	2319.2	2188.9	2059.1	2235.0	2424.5	2689.6	True	False	2173.9420786909805	2381.5032113399075	2201.493707042417	2153.558629912678	2624.2154507731934	2611.873945986577	2520.905590741237	2156.39378318994	2311.7855241919983	2202.4873772431315	0.987039517752932	1.0812789375986578	0.9995488418181274	0.9777847774130275	1.1914780887679555	1.1858746492594556	1.144572094618164	0.9790720280490838	1.0496248687180565	1.0	11.104918035548561	-6.257382312426092	23.281833437843286	1.07206354329887	0.9870394309453174	0.08515835190381238	0.07813203822661595	435.30769344955525	2497775.355708648	0.021255144565202718	0.1537985261493501	5.528632056439778e-07	6.257382312426092	-0.08502411235355267	
SDISERPSVDDIES(ph)ETGSTGALETR	ddPTM_K562_Methotrexat_30min_R1	1	SDISERPSVDDIESETGSTGALETR	25	1	O14523-2;O14523;E9PK05	O14523-2	C2CD2L	C2 domain-containing protein 2-like	1	SDISERPSVDDIES(0.253)ET(0.211)GS(0.211)T(0.253)GALET(0.073)R	62.284	0.0036765	13429000.0	1069.3	1099.4	1588.2	1100.7	931.71	1290.8	745.2	1283.7	1205.2	1318.0	True	False	1022.2948523436676	1281.0571633951931	1254.8585240371697	1004.2033399469968	1054.2461959468328	1540.2288315955398	912.3300695548387	1238.5515433919138	1149.170515057206	1079.2974283188744	0.9471854796652349	1.1869361769818927	1.162662386763722	0.9304231749270033	0.9767893152390239	1.4270661554291084	0.8452999568208868	1.1475535018378533	1.0647394174256182	1.0	10.075876776207807	-10.026472014022747	22.009172332809563	0.9999999890318092	1.0816630715206832	0.02089971957933301	0.1578327946804762	2767.3611306138646	2300823.118706215	0.1466122607046253	0.037855122955831745	9.408664576061472e-11	10.026472014022747	0.081663082488874	
SDISERPSVDDIESETGS(ph)TGALETR	ddPTM_K562_Methotrexat_30min_R1	1	SDISERPSVDDIESETGSTGALETR	25	1	O14523-2;O14523;E9PK05	O14523-2	C2CD2L	C2 domain-containing protein 2-like	1	SDISERPSVDDIES(0.028)ET(0.157)GS(0.597)T(0.218)GALET(0.001)R	77.233	0.00062026	13659000.0	922.1	1013.0	1376.4	954.13	1088.6	841.21	865.62	1203.6	936.9	1142.0	True	False	881.5655880913648	1180.3810319440868	1087.5124496189148	870.4829042823906	1231.769980903631	1003.7619270425189	1059.7573199249327	1161.2687057930254	893.3437234957655	935.1727337937448	0.9426767443433577	1.2622064237861146	1.162900082861878	0.9308257959479582	1.3171577147108116	1.0733438762382712	1.1332209351589857	1.2417692088626986	0.9552713538510793	1.0	9.869089056562599	-9.781916421399881	24.988410187114077	0.9776354834412365	1.135731914117207	0.21004597658749624	0.1204362447128753	407.7174202754868	497529.02799221064	0.10889050128437337	0.028247606102098265	1.6522797436475963e-10	9.781916421399881	0.15809643067597057	
SDISPLT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	3	SDISPLTPR	9	0	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	SDISPLT(1)PR;SDISPLT(1)PR;SDIS(0.001)PLT(0.999)PR	100.82	0.019174	324688000.0	7291.4	6167.8	9577.599999999999	7384.2	6460.7	6280.8	6208.2	8002.1	7244.2	8320.6	True	False	6970.878786475846	7186.924115325508	7567.392645648151	6736.838650710101	7310.3952926916045	7494.475709238655	7600.546883803481	7720.661607366541	6907.418723180726	6813.658711737499	1.0230742514983195	1.0547819342558213	1.1106210284075775	0.988725578389322	1.0729030616250863	1.099919445088782	1.1154868779544909	1.1331153986428173	1.0137605969729173	1.0	12.734213970984685	-7.98522674298985	24.99817634101725	1.083792885782213	1.0474150000625964	0.049375663507560064	0.048692143626018106	551.2670078775436	932808.3836803599	0.014812216308914545	0.016788898905096706	1.0346018651571071e-08	7.98522674298985	-0.03637788571961664	
SDKS(ph)PDLAPTPAPQSTPR	ddPTM_K562_Methotrexat_30min_R1	1	SDKSPDLAPTPAPQSTPR	18	1	F8WAE5;Q9BY44-2;Q9BY44-4;Q9BY44-3;Q9BY44	F8WAE5	EIF2A	Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed	1	S(0.081)DKS(0.919)PDLAPTPAPQSTPR	94.564	0.0015724	123510000.0	2554.5	1730.4	3638.7	2673.0	1943.1	1930.2	1606.6	1880.4	2153.6	2907.6	True	False	2442.207238671935	2016.3191882290714	2874.9865957776415	2438.6622401002287	2198.651708519056	2303.1838323099687	1966.9209470569033	1814.2652661791344	2053.47960606306	2381.0054647799393	1.025704171954789	0.8468351786901197	1.2074674494891835	1.0242153057492533	0.9234131298905955	0.9673156430671346	0.8260883799519935	0.7619744234172999	0.8624422062184766	1.0	11.217355216484895	-8.368744848766243	1.6168486703931924	0.8461712546536497	1.0190191249345724	0.2957057500956827	0.10269927855611533	0.4436038062256858	2.309692070248705	0.047098047936331704	0.03946772033880436	4.278141563271616e-09	8.368744848766243	0.17284787028092263	
SDLNGLPS(ph)PVEER	ddPTM_K562_Methotrexat_30min_R1	3	SDLNGLPSPVEER	13	0	E7EWN3;Q9C0A6	E7EWN3	SETD5	SET domain-containing protein 5	1	SDLNGLPS(1)PVEER;SDLNGLPS(1)PVEER;SDLNGLPS(1)PVEER	138.39	1.6116e-05	31450000.0	4936.3	3912.44	5467.799999999999	5091.7	4079.3799999999997	3623.98	3958.7	4389.23	4675.0	5329.0	True	False	4719.30616255873	4558.9042098907485	4320.1835019080945	4645.318566374237	4615.889973083457	4324.2628456194625	4846.539246305342	4234.858293060751	4457.660270405275	4363.866460934209	1.0814506366788386	1.0446937940705883	0.9899898497313865	1.0644960399131407	1.0577523428834017	0.9909246500392984	1.1106066809541655	0.9704371870614391	1.021493281316172	1.0	12.09139123895979	-9.3013124242844	24.99996094196591	0.9969739313554291	1.0449076977999048	0.2873730242378306	0.03666766696699994	736.7650592327918	461939.77912798076	0.019252499968734516	0.009248911641296159	4.996749477391811e-10	9.3013124242844	0.04793376644447567	
SDNSDIRPSGS(ph)PPPPTLPASPSNHVSSLPPFIAPPGR	ddPTM_K562_Methotrexat_30min_R1	1	SDNSDIRPSGSPPPPTLPASPSNHVSSLPPFIAPPGR	37	1	H7BY37;Q8NEZ4-2;Q8NEZ4;Q8NEZ4-3	H7BY37	KMT2C	Histone-lysine N-methyltransferase 2C	1	S(0.213)DNS(0.067)DIRPS(0.318)GS(0.374)PPPPT(0.019)LPAS(0.003)PS(0.004)NHVSSLPPFIAPPGR	43.062	0.013165999999999999	13295000.0	1073.7	905.96	1266.2	1032.4	1157.4	1118.5	811.19	1168.2	1286.1	1313.8	True	False	1026.5014336120792	1055.6544913129967	1000.4419236468111	941.8910949044055	1309.6183868251537	1334.6342951190031	993.1200068735773	1127.1137438579374	1226.3094917151288	1075.8580890177075	0.9541234518665073	0.9812209454844019	0.9299013818451152	0.8754789358551758	1.217278003663919	1.2405300557228385	0.923095728898899	1.0476416502914692	1.139843167266408	1.0	10.071272076522668	-7.747820977222691	24.99999910925739	1.095821677743514	0.9380925998228747	0.4178171762394748	0.09223452881857143	255.59873977137883	469213.740312541	0.02905447680755399	0.03730335326181456	1.7872241439483674e-08	7.747820977222691	-0.15772907792063917	
SDS(ph)FENPVLQQHFR	ddPTM_K562_Methotrexat_30min_R1	3	SDSFENPVLQQHFR	14	0	B1AHC9;P12956-2;P12956	B1AHC9	XRCC6	X-ray repair cross-complementing protein 6	1	S(0.216)DS(0.784)FENPVLQQHFR;S(0.029)DS(0.971)FENPVLQQHFR;S(0.001)DS(0.999)FENPVLQQHFR	210.37	7.546600000000001e-19	53923000.0	3516.3	3880.23	9041.56	3118.96	4706.9400000000005	4290.67	3473.83	5580.009999999999	3855.6800000000003	4553.92	True	False	3361.727662298738	4521.372054867132	7143.860116228133	2845.5256192977954	5325.985112910652	5119.78125260461	4252.924806121425	5383.757885520224	3676.4302783735216	3729.160959612967	0.9014702499319409	1.2124368199264814	1.9156749181911317	0.7630471438790134	1.428199310941894	1.3729043364049294	1.14045085534812	1.4436914747919543	0.9858599074133507	1.0	11.864635353327367	-9.7833346579442	24.623249220676062	0.9929293298563676	1.278877946584788	0.12196764603364751	0.2993336281770225	477.8228805056371	537337.5627861387	0.27675098334968634	0.07172362101845925	1.6468928424038892e-10	9.7833346579442	0.2859486167284203	
SDS(ph)LLSFR	ddPTM_K562_Methotrexat_30min_R1	1	SDSLLSFR	8	0	Q00587-2;Q00587	Q00587-2	CDC42EP1	Cdc42 effector protein 1	1	S(0.158)DS(0.842)LLSFR	159.34	1.5485999999999998e-13	6546500.0	2661.9	2052.3	2212.5	2348.0	1915.2	1809.3	1871.1	2599.3	2679.0	3490.3	True	False	2544.886063269063	2391.407691864612	1748.1264856014598	2142.1544855051757	2167.0823694898336	2158.9216183807002	2290.741805077912	2507.881145702736	2554.453874741334	2858.172848301492	0.8903891396146304	0.836691067611862	0.6116237814799436	0.7494838833061408	0.7582054985854517	0.7553502650001271	0.8014707040685857	0.8774420858392376	0.8937366668567133	1.0	11.480877450867327	-9.679089734553445	1.0190356141967216	0.9928334194551809	0.7601974409945661	0.5469537917277965	0.06832380700079047	0.3954451823488101	0.8247697256802625	0.06815700432196892	0.023868154099730345	2.0936798120073734e-10	9.679089734553445	-0.2326359784606148	
SDS(ph)PEIPFQAAAGPSDGLDASSPGNSFVGLR	ddPTM_K562_Methotrexat_30min_R1	2	SDSPEIPFQAAAGPSDGLDASSPGNSFVGLR	31	0	A6NNK5;Q12888;Q12888-3;Q12888-2	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	S(0.237)DS(0.763)PEIPFQAAAGPSDGLDASSPGNSFVGLR;S(0.236)DS(0.764)PEIPFQAAAGPSDGLDASSPGNSFVGLR	131.82	3.2789000000000004e-24	53266000.0	9752.7	7293.7	8404.3	9579.8	6741.799999999999	6571.1	6944.0	10440.9	10434.2	12495.5	True	False	9323.982985553252	8498.859953297719	6640.352281554956	8739.953807599015	7628.464869792483	7840.872075687521	8501.368764075147	10073.687629041537	9949.11631945727	10232.443866129368	0.9112176042730875	0.8305796801319357	0.648950765665603	0.854141388112504	0.7455173924817343	0.7662756012414356	0.8308248621051038	0.9844850126553507	0.9723108623532305	1.0	13.320863131912766	-9.192915416924778	3.375415031747111	0.9871080086890909	0.7890286987194525	0.6318319884913044	0.06596962090018403	0.16241687579876452	3.6237404375220135	0.03658308426518269	0.01876225831944917	6.413344705497309e-10	9.192915416924778	-0.1980793099696384	
SDS(ph)RAQAVSEDAGGNEGR	ddPTM_K562_Methotrexat_30min_R1	4	SDSRAQAVSEDAGGNEGR	18	1	P55884-2;P55884;C9JZG1	P55884-2	EIF3B	Eukaryotic translation initiation factor 3 subunit B	1	S(0.011)DS(0.983)RAQAVS(0.006)EDAGGNEGR;S(0.003)DS(0.997)RAQAVSEDAGGNEGR;S(0.002)DS(0.998)RAQAVSEDAGGNEGR;S(0.011)DS(0.989)RAQAVSEDAGGNEGR	231.4	6.633300000000001e-46	238597300.0	10734.999999999998	8970.4	8899.9	11800.8	8046.9	7685.709999999999	8273.3	9467.32	10104.699999999999	13374.2	True	False	10263.102253726054	10452.60612927072	7031.932614329685	10766.24218592397	9105.208395492764	9170.864683360822	10128.79812727865	9134.348989471946	9634.934702537794	10952.002781352272	0.9370982146937368	0.9544013399145713	0.6420681910620766	0.9830386643304554	0.831373820594348	0.83736873213508	0.9248352405940514	0.8340345753951776	0.8797418056670858	1.0	13.41890709764236	-10.047252281406779	20.094241863413398	1.0000000020365132	0.8662349571635808	0.15671850242191687	0.09121851398987638	1547.542235770218	658100.9433704291	0.0846054230095491	0.021845026275149948	8.96907630033377e-11	10.047252281406779	-0.1337650448729324	
SDS(ph)VSASER	ddPTM_K562_Methotrexat_30min_R1	1	SDSVSASER	9	0	O43719	O43719	HTATSF1	HIV Tat-specific factor 1	1	S(0.004)DS(0.995)VS(0.001)ASER	115.91	0.0042587	3777600.0	1712.6	1526.4	2138.3	1869.9	1915.3	1665.5	1093.7	1834.0	1802.8	2345.8	True	False	1637.3161546093388	1778.6116556361847	1689.500051598464	1705.9687702070403	2167.195521242627	1987.3343035500225	1338.9900658509493	1769.4971804789036	1718.9882214944666	1920.9528887332451	0.8523458145238804	0.925900716289338	0.8795114453392917	0.8880846480998427	1.1281877520024783	1.034556503288611	0.6970447186416603	0.921155948621823	0.8948622486145601	1.0	10.90760642208075	-5.7714925384909295	1.1117696350022208	0.93062196929039	0.7214581454178878	0.046960913404909155	0.10713311874170858	19.08763583020467	9.252034956896882	0.035236802949268745	6.073250629008933	1.6924173212017026e-06	5.7714925384909295	-0.2091638238725022	
SDSFENPVLQQHFR	ddPTM_K562_Methotrexat_30min_R1	2	SDSFENPVLQQHFR	14	0	B1AHC9;P12956-2;P12956	B1AHC9	XRCC6	X-ray repair cross-complementing protein 6	0	;	205.87	6.3518e-13	19392600.0	5397.2	4242.8	5934.0	5495.700000000001	4750.5	4685.4	4419.5	5814.6	5891.5	7380.3	False	True	5159.945550424808	4943.850584730871	4688.534492908048	5013.900513624702	5375.274016427243	5590.787238578975	5410.685376271622	5610.097222253347	5617.605450928916	6043.656153430795	0.8537788086265742	0.8180231401689524	0.7757778361110954	0.8296137944211912	0.889407649933206	0.9250670615013827	0.8952669111064739	0.9282621446073948	0.9295044768124303	1.0	12.561205867095424	-7.891095755618251	2.224155837032584	0.9290420222408345	0.8137649174136503	0.7629072245717309	0.030510391496194673	0.15202987175399402	1.5342984964317816	0.010543965536676964	0.012391285975118018	1.2850033041633155e-08	7.891095755618251	-0.11527710482718423	
SDSGS(ph)TS(ph)GGS(ph)KSQS(ph)RSR	ddPTM_K562_Methotrexat_30min_R1	1	SDSGSTSGGSKSQSRSR	17	2	Q96S94;Q96S94-3;A0A0A0MSF3	Q96S94	CCNL2	Cyclin-L2	4	S(0.073)DS(0.098)GS(0.486)T(0.411)S(0.932)GGS(0.997)KS(0.039)QS(0.651)RS(0.314)R	65.598	0.022732	50461000.0	1036.8	1052.5	1066.0	836.9	877.22	1035.8	789.88	1001.5	1031.8	1146.0	True	False	991.2235134292669	1226.4077355588868	842.2611677519354	763.5302763710737	992.5898058499747	1235.9536905536554	967.0306969135488	966.276677344396	983.8318432094476	938.4482950329523	1.0562366820587186	1.3068463569597335	0.8975040737032408	0.813609317010122	1.0576925879705725	1.3170184197630799	1.0304570875474741	1.0296536127336313	1.0483602010006334	1.0	9.87413344995666	-11.832173784542663	0.006429581355156289	5.285897960180876e-07	2.0639229008104474	0.012210440481023266	0.14723859423090635	104520.59838245106	136.98104128936578	22774.569003601155	21210.1448207373	1.4717234690010603e-12	11.832173784542663	2.0639223722206514	
SDSIRPALNSPVERPS(ph)SDQEEGETSAQTER	ddPTM_K562_Methotrexat_30min_R1	1	SDSIRPALNSPVERPSSDQEEGETSAQTER	30	2	Q9UKV5;R4GNG2;H3BRK9	Q9UKV5	AMFR	E3 ubiquitin-protein ligase AMFR	1	SDS(0.001)IRPALNS(0.145)PVERPS(0.425)S(0.425)DQEEGET(0.002)S(0.001)AQTER	59.818999999999996	0.0040667	14861000.0	1232.4	1058.8	1495.4	1392.5	1090.2	1404.0	1249.9	1275.5	1219.7	1364.2	True	False	1178.2251716340938	1233.748703477196	1181.5359758501352	1270.4216869957222	1233.5804089483179	1675.3031295011906	1530.2218920244143	1230.6399420397183	1162.9964132220994	1117.1301606317218	1.054689250326769	1.104391186412448	1.0576529194968587	1.137219038359251	1.1042405374238085	1.499649001109978	1.3697794097324298	1.1016083760050022	1.041057214465001	1.0	10.12558157357903	-8.039669083003147	24.998444175320383	1.2284199567876937	1.0915847889658583	0.1198473148003163	0.14201002830361834	1002.2867718017839	631612.9082442892	0.04959296794385659	0.04960153185027324	9.127060240986443e-09	8.039669083003147	-0.13683516782183536	
SDSQASLTVPLS(ph)PQVVR	ddPTM_K562_Methotrexat_30min_R1	2	SDSQASLTVPLSPQVVR	17	0	Q8TEV9-2;Q8TEV9	Q8TEV9-2	SMCR8	Smith-Magenis syndrome chromosomal region candidate gene 8 protein	1	SDSQASLTVPLS(0.999)PQVVR;SDSQASLTVPLS(1)PQVVR	204.81	2.5574e-16	25027000.0	1921.11	1560.19	2261.8	1787.77	1760.84	1441.3799999999999	1598.03	1686.8000000000002	1713.23	1933.24	True	False	1836.6603046721636	1817.9848788043878	1787.079089325823	1631.0389797919888	1992.4213238786954	1719.9062854703882	1956.4289064019315	1627.4742879126582	1633.5823112441565	1583.1115025213826	1.1601585243660728	1.1483618657996788	1.1288396846839823	1.0302742271749483	1.2585476896007737	1.0864088112120567	1.2358124511671955	1.0280225273586985	1.0318807668584242	1.0	10.628547156352898	-9.3713207996214	8.573797916098536	1.0209238992429515	1.1459836751832444	0.47679331303200023	0.06225113173075129	0.2870844665223721	20.40722242641142	0.032677584429292486	0.015617692432781854	4.252841531050444e-10	9.3713207996214	0.12505977594029294	
SDSVLPASHGHLPQAGS(ph)LER	ddPTM_K562_Methotrexat_30min_R1	4	SDSVLPASHGHLPQAGSLER	20	0	Q8N4C8-5;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8	Q8N4C8-5	MINK1	Misshapen-like kinase 1	1	SDSVLPASHGHLPQAGS(1)LER;SDSVLPASHGHLPQAGS(1)LER;SDSVLPAS(0.001)HGHLPQAGS(0.999)LER;SDSVLPASHGHLPQAGS(1)LER	123.87	1.092e-05	224852000.0	13430.399999999998	11329.8	15933.699999999997	15258.9	11979.0	11979.900000000001	11314.800000000001	13256.2	12628.800000000001	15997.300000000001	True	False	12840.015697106886	13201.856876327862	12589.434116894006	13921.175927970577	13554.448467062832	14294.84612614766	13852.431925656318	12789.971932314318	12041.689844469336	13100.033952993586	0.9801513296209984	1.0077727220936712	0.9610230142966233	1.0626824310473901	1.0346880409394208	1.0912067997259685	1.0574348108838905	0.9763312048051285	0.9192105827876575	1.0	13.677282930529884	-9.438134534140348	5.621324048571503	0.9558211308944432	1.028264658372383	0.3353425225841895	0.04075631354053548	0.25165768557136303	12.768697178539714	0.0249779371759978	0.01150726718938151	3.6464097229464247e-10	9.438134534140348	0.0724435274779397	
SDSVS(ph)ASER	ddPTM_K562_Methotrexat_30min_R1	1	SDSVSASER	9	0	O43719	O43719	HTATSF1	HIV Tat-specific factor 1	1	SDS(0.104)VS(0.745)AS(0.15)ER	80.834	0.030549	3719000.0	2165.6	2178.4	2762.5	2405.5	2132.1	1976.8	1628.7	2237.9	2539.7	2892.8	True	False	2070.4028170162237	2538.3435735310945	2182.689001796174	2194.613549779685	2412.508521297658	2358.788622790566	1993.9774346269005	2159.1917885462058	2421.629901336532	2368.885888194873	0.8739985439289784	1.0715347607838344	0.9213989634002236	0.9264327845914155	1.018414830921225	0.9957375467283477	0.8417363810404314	0.9114798645668587	1.0222653245580564	1.0	11.209992988727581														
SDTPEVHPPLPISQS(ph)PENESNDR	ddPTM_K562_Methotrexat_30min_R1	1	SDTPEVHPPLPISQSPENESNDR	23	0	Q03164-2;Q03164;Q03164-3;A0A3B3ITZ1;E9PR05	Q03164-2	KMT2A	Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180	1	SDTPEVHPPLPIS(0.213)QS(0.574)PENES(0.213)NDR	65.801	0.004622600000000001	9737200.0	1459.0	1492.9	1644.1	1320.9	1212.7	1008.9	1380.6	1377.7	1300.5	1397.7	True	False	1394.8641069572727	1739.5763500388243	1299.0258779558692	1205.0987478295508	1372.1913061196337	1203.855646263355	1690.2346940786515	1329.2455101122061	1240.0400388581945	1144.562986010085	1.2186870657242992	1.5198607427477098	1.1349535969918418	1.0528898475307957	1.198877932356571	1.051803754776277	1.4767511397260564	1.161356366018719	1.083417910604413	1.0	10.160581142142007	-8.66031808362876	0.02676443076219404	1.0709020594354122e-11	2.3778182516052437	0.18937832891716266	0.1509639335286529	458.7910148268221	6.766243646620644	285.06467187404627	313.2974793753441	2.186159861995467e-09	8.66031808362876	2.3778182515945345	
SDTPEVHPPLPISQS(ph)PENESNDRR	ddPTM_K562_Methotrexat_30min_R1	2	SDTPEVHPPLPISQSPENESNDRR	24	1	Q03164-2;Q03164;Q03164-3;A0A3B3ITZ1;E9PR05	Q03164-2	KMT2A	Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180	1	SDTPEVHPPLPIS(0.233)QS(0.761)PENES(0.006)NDRR;SDTPEVHPPLPIS(0.163)QS(0.811)PENES(0.026)NDRR	147.28	3.6101e-22	52675000.0	3258.7	2571.3	3584.8	3399.7	2676.6	2477.8999999999996	2052.5299999999997	3036.3	3199.2	3287.1	True	False	3115.4514498572075	2996.163620372982	2832.3994691905596	3101.653579374763	3028.6198152550573	2956.7191058340463	2512.862100997576	2929.511608008777	3050.4698902846126	2691.774337349751	1.1573969654991947	1.1130812783225077	1.0522425412448446	1.1522710267119078	1.1251388250610024	1.098427555686244	0.933533716452499	1.0883199112794484	1.1332561752884618	1.0	11.39434175254766	-8.542163695773283	24.999104899059052	1.041829321190497	1.117077683937955	0.32179507142633146	0.05580917447649613	325.8334230597765	422374.6575645586	0.021753060772201266	0.016852243864005464	2.8696987214132602e-09	8.542163695773283	0.07524836274745805	
SDVLELTDDNFESR	ddPTM_K562_Methotrexat_30min_R1	3	SDVLELTDDNFESR	14	0	H7BZJ3	H7BZJ3	PDIA3		0	;;	194.06	1.7526e-07	41897000.0	3424.7000000000003	2806.2200000000003	3409.3999999999996	3291.92	2871.14	2611.43	2650.89	2683.01	3483.77	3977.4900000000002	False	True	3274.154288619995	3269.9001574157332	2693.813532207736	3003.3224846355192	3248.745235138389	3116.0518885137426	3245.41956264389	2588.647017555456	3321.810293097283	3257.128018333871	1.005227387499136	1.0039212886352546	0.8270517821358803	0.9220768934258281	0.9974263267675398	0.9566869558009288	0.9964052823149487	0.7947636700136935	1.019858683600806	1.0	11.66938470927334	-6.594746261568011	24.9999999703863	0.9347045559340588	1.0049414836121335	0.11526447810873475	0.07146402202995926	75.16350422978309	26144.565188392513	0.017715167050866627	0.046869950588127124	2.5424577136264795e-07	6.594746261568011	0.07023692767807477	
SEAAAPHTDAGGGLS(ph)S(ph)DEEEGTSSQAEAAR	ddPTM_K562_Methotrexat_30min_R1	2	SEAAAPHTDAGGGLSSDEEEGTSSQAEAAR	30	0	Q01831-2;Q01831	Q01831-2	XPC	DNA repair protein complementing XP-C cells	2	SEAAAPHTDAGGGLS(1)S(1)DEEEGTSSQAEAAR;SEAAAPHTDAGGGLS(1)S(1)DEEEGTSSQAEAAR	158.97	3.9172e-36	368350000.0	6759.0	5740.1	8216.7	6928.5	5846.700000000001	5494.5	5339.6	6300.5	6017.200000000001	7059.0	True	False	6461.882452998085	6688.553959982487	6492.126957849274	6321.08916219021	6615.643530543133	6556.234362567159	6537.141223020688	6078.907843842605	5737.461685365272	5780.546696891457	1.1178670101347028	1.1570798249202483	1.1230991285548262	1.093510613034133	1.1444667567690021	1.1341893260879348	1.1308863271593492	1.0516146936606523	0.9925465507355292	1.0	12.49699022714521	-9.461389567803304	2.5861393661694354	0.9963960137309753	1.1294763225822275	0.9162351332282184	0.01633141334083335	0.07870705044159965	0.992578803412956	0.013024841867991596	0.004690565564290739	3.456292048366608e-10	9.461389567803304	0.13308030885125222	
SEAAGSPDQGSTYS(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	4	SEAAGSPDQGSTYSPAR	17	0	Q96S66-4;Q96S66-3;Q96S66-2;Q96S66	Q96S66-4	CLCC1	Chloride channel CLIC-like protein 1	1	SEAAGSPDQGSTYS(1)PAR;SEAAGSPDQGSTYS(1)PAR;SEAAGSPDQGST(0.005)YS(0.995)PAR;SEAAGSPDQGSTYS(1)PAR	312.63	3.5752999999999976e-247	51773600.0	10699.2	8728.5	11960.600000000002	10640.0	9474.9	9336.3	8777.1	9798.1	10327.099999999999	11502.400000000001	True	False	10228.875978860347	10170.736265867683	9450.23351126998	9707.207719665706	10721.015425375532	11140.407840428752	10745.58810183813	9453.495269384053	9846.99537508071	9419.203899465118	1.085959714646501	1.079787248946298	1.0032942923983867	1.0305762380000016	1.1382082328618388	1.1827334835655672	1.1408170177150887	1.0036405804869435	1.0454169460796878	1.0	13.201389414688192	-9.278206644863408	24.630729927521156	1.018396562969625	1.0930280081534494	0.33115185182775153	0.050829157970946656	1017.3713149557507	1494484.7564007107	0.03217703852794702	0.015524008748660938	5.269790559639644e-10	9.278206644863408	0.07463144518382436	
SEAHLTELLEEICDR	ddPTM_K562_Methotrexat_30min_R1	2	SEAHLTELLEEICDR	15	0	Q9Y2B0;F8W1K5;F8VXJ7;F8W031	Q9Y2B0	CNPY2	Protein canopy homolog 2	0	;	155.14	1.6917e-08	12876100.0	4795.0	3774.0	4868.299999999999	5031.9	3847.3999999999996	3873.3999999999996	3887.0	4776.9	5048.5	6365.9	False	True	4584.217541370884	4397.589352968399	3846.51035925586	4590.761139528744	4353.400536954462	4621.879730633841	4758.75869613481	4608.893719427302	4813.796336928563	5212.973823167775	0.8793862576093249	0.8435855429437222	0.7378725636720052	0.8806415100582781	0.8351088427888989	0.8866109609246526	0.9128683276684955	0.8841198662736828	0.9234261479570133	1.0	12.347890900153109	-9.638554035832975	0.4042000070110827	1.003846355534795	0.820170987649356	0.6140444400908589	0.03975158018056037	0.7634069624072174	0.3598619675653789	0.053794673315787	0.036674885015020954	2.298507706308119e-10	9.638554035832975	-0.18367536788543892	
SEAPAEVTHFS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	4	SEAPAEVTHFSPK	13	0	Q6PID6	Q6PID6	TTC33	Tetratricopeptide repeat protein 33	1	SEAPAEVT(0.021)HFS(0.979)PK;SEAPAEVT(0.001)HFS(0.999)PK;SEAPAEVT(0.116)HFS(0.884)PK;SEAPAEVT(0.003)HFS(0.997)PK	133.9	0.0001155	77743000.0	18139.7	12870.6	24570.6	18614.9	13508.399999999998	12463.5	11588.3	15408.4	15911.7	22119.000000000004	True	False	17342.300507863503	14997.2478872059	19413.56683711603	16982.96061849672	15284.99137427761	14871.89498186474	14187.271262778242	14866.477838435745	15171.968540023036	18113.034762507745	0.9574486404542442	0.8279809586767191	1.071800893205387	0.9376098948172854	0.8438669485643612	0.8210603676777646	0.7832630726323422	0.8207612933647065	0.8376270867335586	1.0	14.144740663552724	-7.752926656482725	5.207632934841072	0.8366513631597304	0.949946086733783	0.2667934442995954	0.07736118074155972	0.21114208112614194	16.422342862639333	0.023045995851610223	0.028376419804128715	1.7663360937904743e-08	7.752926656482725	0.11329472357405257	
SECQDMSLSS(ph)PTSVLGGSR	ddPTM_K562_Methotrexat_30min_R1	1	SECQDMSLSSPTSVLGGSR	19	0	O95613-2;O95613	O95613-2	PCNT	Pericentrin	1	SECQDMS(0.008)LS(0.258)S(0.723)PT(0.009)S(0.002)VLGGSR	83.948	0.0040199	28634000.0	1009.7	999.37	1251.9	1112.6	1007.6	980.54	965.69	966.72	1063.7	1364.8	True	False	965.3147969806429	1164.498906114475	989.1432982257485	1015.0600854229383	1140.117061141372	1170.0154776361094	1182.2705647724265	932.7199096578881	1014.2488191722124	1117.6214948176023	0.8637224690620181	1.0419439063352331	0.8850431946883577	0.9082324294313951	1.0201280723644646	1.0468798990189947	1.0578452277936683	0.8345579554284697	0.9075065430248722	1.0	10.126215957630682	-3.2103645989118306	24.211763716118277	0.9581144873090237	0.07069135289054118	0.0	0.08063363970444692	0.0	0.0	0.019021953653625162	0.0	0.0006160775752390113	3.2103645989118306	-0.8874231344184825	
SEDADRCTLPEHES(ph)PSQDISDACEAESTER	ddPTM_K562_Methotrexat_30min_R1	2	SEDADRCTLPEHESPSQDISDACEAESTER	30	1	Q32MZ4-3;Q32MZ4-2;Q32MZ4	Q32MZ4-3	LRRFIP1	Leucine-rich repeat flightless-interacting protein 1	1	SEDADRCTLPEHES(0.977)PS(0.022)QDIS(0.001)DACEAESTER;SEDADRCT(0.003)LPEHES(0.959)PS(0.038)QDISDACEAESTER	96.46600000000001	1.4737e-08	49376000.0	1642.85	1319.48	1887.9	1458.9499999999998	1554.8799999999999	1361.3600000000001	1289.08	1656.47	1326.79	1650.12	True	False	1570.6322810930474	1537.501642674813	1491.655589679999	1331.0461186660038	1759.373973826416	1624.4235529755988	1578.1890043770163	1598.2110112038656	1265.1078224964738	1351.2672780102737	1.1623402021588107	1.1378220043474798	1.1038938143136607	0.9850354110742285	1.302017744718184	1.202148219978763	1.1679325253112636	1.182749732204878	0.9362380360155922	1.0	10.400097349793427	-9.760788803196649	24.999820536199042	0.9681189548820903	1.1543556324920439	0.4891110032536361	0.07659272340940648	14.864349068724819	571393.6149893687	0.06242011651030677	0.020352306564144003	1.7346473492738558e-10	9.760788803196649	0.18623667760995355	
SEDDSAKFDS(ph)NEEDSASVFSPSFGLK	ddPTM_K562_Methotrexat_30min_R1	2	SEDDSAKFDSNEEDSASVFSPSFGLK	26	1	Q02880-2;Q02880	Q02880-2	TOP2B	DNA topoisomerase 2-beta	1	SEDDS(0.002)AKFDS(0.998)NEEDS(0.001)ASVFSPSFGLK;SEDDS(0.005)AKFDS(0.94)NEEDS(0.051)AS(0.004)VFSPSFGLK	115.01	8.3219e-09	56492000.0	11450.0	6570.8	17340.5	10911.400000000001	6820.0	5413.4	5461.700000000001	10136.3	11230.8	17991.4	True	False	10946.671709842889	7656.513015496755	13700.966021953493	9954.814503041385	7716.949540476539	6459.46293535737	6686.6252561562915	9779.800583690463	10708.682559329969	14732.9831197695	0.7430044289641561	0.519685182101569	0.929951925592639	0.6756822038086425	0.523787306192018	0.4384355077886242	0.45385413135944086	0.6638031486350789	0.7268509352298442	1.0	13.846761954957884	-10.13997300109487	2.1175000465453317	0.9989115905554665	0.6122426624660112	0.40605620970497347	0.139864479276269	0.59031762864637	5.266534484493046	0.14501724046518893	0.04005493572780418	7.24480997685531e-11	10.13997300109487	-0.3866689280894553	
SEDFSLPAYMDRR	ddPTM_K562_Methotrexat_30min_R1	1	SEDFSLPAYMDRR	13	1	H3BNI5;Q86WV2;H3BN72;H3BNV9;P13073	H3BNI5	COX4I1	Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	0		84.89200000000001	0.024946	20359000.0	3056.1	2659.2	3344.7	3211.9	2706.9	2947.5	2349.2	2775.8	2890.6	3566.6	False	True	2921.7575032708173	3098.587601328446	2642.693178029922	2930.317713796453	3062.904796351313	3517.062659690001	2876.067900427035	2678.1735406615835	2756.216636926951	2920.654178939378	1.000377766166017	1.0609224548637537	0.9048291978852503	1.003308688487243	1.048705053284875	1.2042037311542326	0.9847341466052875	0.9169772854224562	0.9436983867524701	1.0	11.51207583014	-8.993892699273463	24.989423495222876	0.9483738144718666	1.0364059883405277	0.21594373873664596	0.07230987979032812	244.07971400134954	998704.5573810635	0.03256364537722999	0.02188675801691585	1.014161922811681e-09	8.993892699273463	0.08803217386866102	
SEDPPTT(ph)PIR	ddPTM_K562_Methotrexat_30min_R1	2	SEDPPTTPIR	10	0	A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0;H7C151	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	SEDPPT(0.053)T(0.947)PIR;SEDPPT(0.05)T(0.95)PIR	108.31	0.0081528	84174000.0	15773.199999999999	13579.3	17478.0	14640.900000000001	14235.599999999999	14054.900000000001	12564.4	16667.8	16903.3	16213.5	True	False	15079.8290142964	15823.048516365596	13809.606651002185	13357.355028463693	16107.830920587652	16770.81050913553	15382.286535044044	16081.58402660103	16117.46927245808	13277.078037972748	1.1357791956308265	1.1917568361887543	1.0401088712069322	1.0060462844506413	1.2132060137417953	1.2631401624040037	1.1585596236649625	1.2112291560392527	1.213931952976532	1.0	13.696650059068858	-7.793242324162477	24.999854666526456	1.190656514319888	1.0966383991851298	0.1891956703969494	0.08129546428529041	288.684748125055	226929.381063029	0.025127281092690756	0.028494023918362026	1.6097471906819163e-08	7.793242324162477	-0.0940181151347581	
SEDRRS(ph)S(ph)EEREAGEI	ddPTM_K562_Methotrexat_30min_R1	1	SEDRRSSEEREAGEI	15	3	Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2	Q9Y383	LUC7L2	Putative RNA-binding protein Luc7-like 2	2	SEDRRS(1)S(1)EEREAGEI	85.837	0.022930000000000002	353100000.0	2198.8	2102.4	2546.9	2503.7	2274.9	2302.0	1818.0	2578.3	2228.7	2797.0	True	False	2102.143384768782	2449.785865310218	2012.3404954478467	2284.2045082450218	2574.089224285936	2746.828920307507	2225.732778382579	2487.6197276056496	2125.0882234550236	2290.4361965158523	0.9177917236753873	1.0695717562605602	0.8785839564136136	0.9972792569903016	1.1238423616434148	1.1992601778149972	0.9717506131663051	1.086089947141836	0.927809395733288	1.0	11.161406659675947	-7.5331790157948335	23.711838072501997	1.0592945718160036	0.9619397715724847	0.20062301638658409	0.0856882773939686	175.69032264102694	404445.9254381183	0.025338567024266463	0.032757173950957084	2.9296853826477327e-08	7.5331790157948335	-0.09735480024351895	
SEEAHAEDSVMDHHFR	ddPTM_K562_Methotrexat_30min_R1	4	SEEAHAEDSVMDHHFR	16	0	Q8NC51-4;Q8NC51-3;Q8NC51-2;Q8NC51	Q8NC51-4	SERBP1	Plasminogen activator inhibitor 1 RNA-binding protein	0	;;;	111.66	0.00034757	196302000.0	14434.7	12440.2	16650.5	15198.2	13111.2	12811.4	11974.5	16247.4	15758.3	15716.6	False	True	13800.167871621765	14495.73160275503	13155.78759254559	13865.797402727761	14835.552612184161	15287.021733113634	14660.08644375257	15675.969732886022	15025.700072540632	12870.171443032184	1.0722598321790868	1.1263044681975012	1.0221921013855675	1.0773591839162797	1.1527082353060665	1.1877869537930603	1.1390746819996274	1.218007841020088	1.1674825109400881	1.0	13.651743651318236	-7.76441719277569	6.107596007809183	1.1573165401062007	1.074101521193518	0.23188921346259406	0.059349029298705745	0.18458669261614358	26.399760136213985	0.01721896182316023	0.020822351055537872	1.7202153045931172e-08	7.76441719277569	-0.08321501891268257	
SEGS(ph)PVLPHEPAK	ddPTM_K562_Methotrexat_30min_R1	1	SEGSPVLPHEPAK	13	0	Q9UKE5-8;Q9UKE5-5;Q9UKE5-7;Q9UKE5-3;Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5	Q9UKE5-8	TNIK	TRAF2 and NCK-interacting protein kinase	1	S(0.023)EGS(0.977)PVLPHEPAK	93.51	0.0087598	19095000.0	7729.3	5819.0	12752.0	8671.9	6599.3	5600.8	5094.4	7772.2	7372.9	10127.0	True	False	7389.529226802498	6780.490843911789	10075.52946639088	7911.647990993327	7467.223622062588	6683.075333126967	6236.948881293842	7498.8473206751005	7030.135488271886	8292.902167363616	0.8910667312444241	0.8176258090438036	1.2149581971487282	0.9540264471139308	0.9004355135708156	0.8058789550693052	0.7520827757789189	0.9042488587634029	0.8477292202889722	1.0	13.017661357402517	-7.8820645379856344	3.4370522509402166	0.8496534725198652	0.9763429091382746	0.16270349920105331	0.11270082059867008	0.4021186377344921	9.283438691155979	0.03756012091817569	0.043508383838490004	1.3120049150862497e-08	7.8820645379856344	0.12668943661840937	
SELS(ph)PVAR	ddPTM_K562_Methotrexat_30min_R1	1	SELSPVAR	8	0	P25054-2;P25054-3;P25054	P25054-2	APC	Adenomatous polyposis coli protein	1	SELS(1)PVAR	106.88	0.012765	12874000.0	4860.5	4128.1	4729.8	4214.4	4406.7	3791.3	3835.3	3980.0	4290.8	4501.5	True	False	4646.838239798369	4810.198359297518	3737.0796165413744	3844.930095278116	4986.258290325212	4523.915067576828	4695.463655077397	3840.0211441145257	4091.321644546518	3686.234729573153	1.260592062279346	1.3049083176139775	1.013793176696078	1.0430508031492989	1.352669771765347	1.2272455227235826	1.2737831417537286	1.0417191052180175	1.109891785165909	1.0	11.8479322255192	-9.274354466872083	24.439307234705463	1.0568540591546103	1.2065306146127508	0.33005586788708696	0.10443050484780705	823.8650899411064	1558994.1890246968	0.06089867288241079	0.02955141184920958	5.31674134942595e-10	9.274354466872083	0.14967655545814051	
SELSQDAEPAGS(ph)QETK	ddPTM_K562_Methotrexat_30min_R1	1	SELSQDAEPAGSQETK	16	0	X6RJY0;Q9BVJ6-2;Q9BVJ6-3;Q9BVJ6	X6RJY0	UTP14A	U3 small nucleolar RNA-associated protein 14 homolog A	1	SELSQDAEPAGS(1)QETK	145.48	2.3739e-21	0.0	1299.1	1341.5	1689.8	1137.0	807.12	976.5	1073.0	1435.9	1483.6	1659.0	True	False	1241.9931194984183	1563.1600733988091	1335.13407248332	1037.3209753063825	913.2704271421444	1165.1948048133272	1313.6475639188707	1385.3985831241325	1414.6277598231586	1358.5390239613155	0.9142123248524249	1.1506184554351973	0.9827719696930386	0.7635562593422567	0.6722445296265187	0.8576822485494581	0.9669560761592645	1.0197709147025444	1.0412860689848247	1.0	10.407840292155619	-8.9781863120088	3.9533517896144503	1.019804726783772	0.8909845072839289	0.19578016149456767	0.11941351945391428	0.4406561813507543	15.382530668188297	0.06505227740178211	0.040176827545864484	1.0515106797518815e-09	8.9781863120088	-0.12882021949984312	
SELSQDAEPAGS(ph)QETKDSGSQEVLSELR	ddPTM_K562_Methotrexat_30min_R1	1	SELSQDAEPAGSQETKDSGSQEVLSELR	28	1	X6RJY0;Q9BVJ6-2;Q9BVJ6-3;Q9BVJ6	X6RJY0	UTP14A	U3 small nucleolar RNA-associated protein 14 homolog A	1	SELSQDAEPAGS(0.943)QET(0.04)KDS(0.004)GS(0.013)QEVLSELR	106.1	1.8456e-11	10972000.0	817.58	791.04	1233.2	1088.0	619.79	692.75	660.31	616.85	796.49	1036.0	True	False	781.6401621426508	921.7459146190035	974.3681726751279	992.616729228974	701.3032486351835	826.6141331637814	808.4013261242026	595.1550358660917	759.4613537486844	848.3703609547457	0.921343080942859	1.0864900013499788	1.148517460674352	1.1700275904404478	0.8266475125863018	0.9743552712444125	0.9528872805203114	0.7015273791464278	0.8952002435516438	1.0	9.72855040888631	-7.765906727976329	24.999677679582536	0.8840311381706493	1.0867244250278592	0.4594900843566443	0.1005895359057055	100.75135722864606	563812.9710595026	0.03188282484676284	0.03738875441627531	1.714325448116271e-08	7.765906727976329	0.2026932868572099	
SEMASILR	ddPTM_K562_Methotrexat_30min_R1	1	SEMASILR	8	0	C9J867	C9J867	NME6		0		86.113	0.021256999999999998	0.0	3354.2	2637.0	3255.1	3236.3	2883.5	2140.8	2978.9	3671.8	3384.4	4469.1	False	True	3206.7533842056755	3072.7194286639283	2571.898993573474	2952.578603679897	3262.7307917835915	2554.4793017351494	3646.9941548536094	3542.6607128039473	3227.0599827079404	3659.7026835355728	0.8762333067744423	0.8396090323095399	0.7027617312040246	0.8067810035397367	0.8915289229537975	0.6980018658967435	0.9965274423140609	0.9680187215048427	0.8817820084746163	1.0	11.83751073251242	-8.777861710557668	24.999995384041277	0.958916969772668	0.8038830916137716	0.5755359148731444	0.0669122583905185	187.1138143033802	284843.8417148246	0.02797610091130334	0.018922718311940156	1.6677781872905883e-09	8.777861710557668	-0.15503387815889647	
SEMSS(ph)ALLLANY(ph)GS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	SEMSSALLLANYGSK	15	0	Q5VWT5-2;Q5VWT5	Q5VWT5-2	C1orf168	Uncharacterized protein C1orf168	3	S(0.009)EMS(0.441)S(0.55)ALLLANY(1)GS(1)K	84.508	0.013586	54491000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
SENSSTQS(ph)SPEMPTTK	ddPTM_K562_Methotrexat_30min_R1	1	SENSSTQSSPEMPTTK	16	0	F2Z357;J3KPC5;P47736;P47736-3;P47736-4;A0A0A0MQY8;X6R8W7;P47736-2	F2Z357	RAP1GAP	Rap1 GTPase-activating protein 1	1	SENS(0.001)S(0.003)T(0.022)QS(0.387)S(0.387)PEMPT(0.022)T(0.178)K	78.32600000000001	0.023976	0.0	446.01	515.72	925.31	440.71	396.61	444.68	449.37	246.91	510.81	623.74	True	False	426.4039344372948	600.9339642588402	731.100076109327	402.07363854641665	448.77116675196487	530.6081165431549	550.1526615081293	238.22603535007977	487.06255459373705	510.77464183582316	0.8348181360466846	1.1765148757169444	1.4313554672205564	0.7871840252313349	0.8786089402147965	1.0388301867063063	1.0770947037048941	0.4664014534743721	0.9535762246205876	1.0	8.996543091859557	-7.291433639039829	24.998033663426853	0.8777509014803473	1.1504581801342741	0.24431430986931135	0.21047594555611565	936.9315622526599	780861.788390154	0.06072634430338673	0.09008496818996696	5.1117118092509e-08	7.291433639039829	0.27270727865392685	
SENSSTQSSPEMPT(ph)TK	ddPTM_K562_Methotrexat_30min_R1	1	SENSSTQSSPEMPTTK	16	0	F2Z357;J3KPC5;P47736;P47736-3;P47736-4;A0A0A0MQY8;X6R8W7;P47736-2	F2Z357	RAP1GAP	Rap1 GTPase-activating protein 1	1	SENS(0.001)S(0.003)T(0.011)QS(0.165)S(0.165)PEMPT(0.639)T(0.016)K	111.52	0.018594	4013000.0	1062.6	777.0	1894.7	1421.7	805.18	834.56	836.96	1141.5	880.78	1549.5	True	False	1015.8893763213148	905.3860432581998	1497.0283626074965	1297.0617683316475	911.0752831379614	995.8269086584847	1024.6695853658327	1101.3527979916407	839.8327300465364	1268.8705350380096	0.8006249245049128	0.7135369750161931	1.1798117469586071	1.0222175805294378	0.7180206790054193	0.7848136442293967	0.8075446289208207	0.8679788580311302	0.6618742471006932	1.0	10.309329160785971	-7.763967390895667	24.988330271118638	0.7990516711751805	0.9315658813249753	0.14757688908294042	0.14328839292045417	129.8606618352135	1283621.9339080967	0.045444670906868115	0.053960497987052915	1.721997866750851e-08	7.763967390895667	0.1325142101497948	
SEPHS(ph)PGIPEIFR	ddPTM_K562_Methotrexat_30min_R1	4	SEPHSPGIPEIFR	13	0	Q9UJJ2;Q8ND82	Q9UJJ2	ZNF280C	Zinc finger protein 280C	1	SEPHS(1)PGIPEIFR;SEPHS(1)PGIPEIFR;SEPHS(1)PGIPEIFR;SEPHS(1)PGIPEIFR	148.7	6.1424999999999994e-09	60876000.0	14881.7	11700.5	17714.7	14174.400000000001	12731.0	11974.7	11250.6	12985.5	13724.300000000001	15151.0	True	False	14227.51828684445	13633.808750505219	13996.62655569906	12931.752359175704	14405.349648065521	14288.641299742098	13773.83344140321	12528.79260474853	13086.260288582484	12407.007083808247	1.1467325029105577	1.0988797425849792	1.1281227181666837	1.0422942674105728	1.161065642242214	1.1516589942460398	1.110165678826664	1.0098158661567318	1.054747547106723	1.0	13.598867518700189	-9.221598524266733	6.345508529884237	1.0241725631643144	1.119516581326552	0.6332610589600942	0.034287523707764306	0.13473976048113245	15.763544467560939	0.016811569776811017	0.009427262195625783	6.003457987049757e-10	9.221598524266733	0.09534401816223759	
SEPSLEPESFRS(ph)PTFGK	ddPTM_K562_Methotrexat_30min_R1	1	SEPSLEPESFRSPTFGK	17	1	Q9C0B5-2;Q9C0B5;H0YEF4	Q9C0B5-2;H0YEF4	ZDHHC5	Palmitoyltransferase ZDHHC5;Palmitoyltransferase	1	SEPSLEPES(0.006)FRS(0.497)PT(0.497)FGK	84.759	0.007936799999999999	17387000.0	1641.7	852.04	1656.6	1581.4	1021.4	946.18	905.35	1247.3	1390.7	1689.2	True	False	1569.5328337160765	992.8251277962888	1308.9022987784758	1442.761117281894	1155.7320030267942	1129.0158939255248	1108.3977837781445	1203.4317520236298	1326.0466605460144	1383.2695113173327	1.1346543973353098	0.7177380255065328	0.9462380888681379	1.0430079644478722	0.8355074651548945	0.8161937241357442	0.8012883785189345	0.8699908023546058	0.9586321752173782	1.0	10.433866558113696	-6.232259100344583	23.664289700046506	0.883688017486802	1.1346552000888448	0.37881553422929803	0.09478081627262697	5863.700644323221	4755124.533387047	0.023915540674994067	2.293750405522892	5.857885784306572e-07	6.232259100344583	0.25096718260204276	
SEPVKEESS(ph)ELEQPFAQDTSSVGPDR	ddPTM_K562_Methotrexat_30min_R1	1	SEPVKEESSELEQPFAQDTSSVGPDR	26	1	Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151	Q15424-2;Q14151	SAFB;SAFB2	Scaffold attachment factor B1;Scaffold attachment factor B2	1	S(0.001)EPVKEES(0.437)S(0.561)ELEQPFAQDT(0.001)S(0.001)SVGPDR	59.358999999999995	0.0036025999999999996	20420000.0	3266.0	2377.4	4740.4	3375.4	2704.8	2497.8	2380.2	3203.7	2865.1	4008.5	True	False	3122.4305505979805	2770.2249411094494	3745.4548213989437	3079.4839226465824	3060.528609542662	2980.464499193785	2914.0204395523706	3091.0240551255542	2731.902126361102	3282.5218068408253	0.951229187294594	0.8439319231135826	1.1410296844314511	0.9381457622699996	0.932371143175492	0.9079801063263164	0.8877383338259955	0.9416613923733311	0.832257114230826	1.0	11.68058888009605	-7.654676938041034	4.017921353005863	0.911966370164893	0.9750897881167627	0.10135713894233445	0.07859654844963354	0.5042582721899433	14.978506358899507	0.023696773491366202	0.030897305080814973	2.214741593763495e-08	7.654676938041034	0.06312341795186971	
SEPVKEESSELEQPFAQDT(ph)SSVGPDRK	ddPTM_K562_Methotrexat_30min_R1	1	SEPVKEESSELEQPFAQDTSSVGPDRK	27	2	Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151	Q15424-2;Q14151	SAFB;SAFB2	Scaffold attachment factor B1;Scaffold attachment factor B2	1	SEPVKEESSELEQPFAQDT(0.702)S(0.089)S(0.209)VGPDRK	54.869	0.0093628	22242000.0	2037.0	1337.5	2956.2	2300.4	1266.3	1301.7	1307.7	1397.7	1969.3	3122.1	True	False	1947.4559190349316	1558.4991413871837	2335.734018863293	2098.7275036014075	1432.840645616633	1553.2351023302708	1600.9850133613306	1348.542098776099	1877.7476728361728	2556.6574362324423	0.7617195371722361	0.609584655065807	0.9135889641536381	0.82088725452955	0.5604351311641128	0.607525701456179	0.6262023964073123	0.5274629599041419	0.7344541533899321	1.0	11.320043153041087	-10.028349123039131	23.60477172305792	1.0000000051100444	0.6775737817301892	0.4119305316088946	0.11478040877679023	1672.9367042838458	1392961.7959453515	0.11945706396154127	0.030843681312763854	9.36808617278063e-11	10.028349123039131	-0.32242622337985516	
SEQYLTLSGAHDLS(ph)ESELDVAGLQSR	ddPTM_K562_Methotrexat_30min_R1	2	SEQYLTLSGAHDLSESELDVAGLQSR	26	0	O43182-4;O43182	O43182-4	ARHGAP6	Rho GTPase-activating protein 6	1	SEQYLT(0.002)LS(0.03)GAHDLS(0.92)ES(0.047)ELDVAGLQSR;SEQYLTLSGAHDLS(0.938)ES(0.061)ELDVAGLQSR	111.16	1.9797e-08	84658000.0	4258.6	3291.6000000000004	3373.1000000000004	4082.5	3190.8999999999996	3282.3999999999996	3647.3	3691.7	4296.700000000001	4362.9	True	False	4071.3970431036637	3835.4809523663944	2665.1324061388864	3724.593563490153	3610.5592798690013	3916.6773449250027	4465.2998694140715	3561.860818524522	4096.9473548343	3572.7365326346116	1.139573826929054	1.0735415044831278	0.7459638800103632	1.0425044022889531	1.0105864921437402	1.0962681712319722	1.249826240649563	0.9969559148818428	1.146725295137597	1.0	11.802813812613742	-8.210987498296626	3.484334923461977	1.1080010949227712	0.9915626690118797	0.13924535767952861	0.11712159235650761	0.45964859752922277	11.388865178509114	0.04234638677831503	0.04100145535633563	6.1519458159128485e-09	8.210987498296626	-0.11643842591089149	
SES(ph)LIDASEDSQLEAAIR	ddPTM_K562_Methotrexat_30min_R1	2	SESLIDASEDSQLEAAIR	18	0	C9JAT7;O94888	C9JAT7	UBXN7	UBX domain-containing protein 7	1	S(0.001)ES(0.999)LIDASEDSQLEAAIR;S(0.015)ES(0.984)LIDASEDSQLEAAIR	315.94	7.285799999999996e-254	20595000.0	4422.5	3348.4	4126.1	3808.3999999999996	2654.29	2956.6	2920.39	3626.9	3595.7	4036.7	True	False	4228.092195351981	3901.666186931473	3260.0879964927376	3474.5234849224507	3003.3756592069626	3527.92110589973	3575.3617979431797	3499.3398712535104	3428.536691828075	3305.614513577238	1.279063901125139	1.1803149371791708	0.98622751778905	1.0510976009608648	0.9085680277815572	1.067251214988743	1.081602765010258	1.0586049452773694	1.037185878070766	1.0	11.69070277826495	-6.589566738877233	3.689041203836628	1.0265998245292445	1.2637610544424132	0.7525071305820051	0.04856816055097912	0.10627578238780476	2.809175677443197	0.013210827255760905	0.04413831494059053	2.572961342073368e-07	6.589566738877233	0.23716122991316868	
SES(ph)LSNCSIGK	ddPTM_K562_Methotrexat_30min_R1	2	SESLSNCSIGK	11	0	A0A3B3ISP1;Q92625	A0A3B3ISP1	ANKS1A	Ankyrin repeat and SAM domain-containing protein 1A	1	S(0.003)ES(0.638)LS(0.356)NCS(0.002)IGK;S(0.023)ES(0.945)LS(0.031)NCS(0.001)IGK	109.0	0.002878	17447000.0	1656.88	1449.8200000000002	2060.81	1689.8600000000001	1623.76	1369.34	1094.06	1791.4099999999999	1866.19	2026.03	True	False	1584.0455390920936	1689.3781122736207	1628.2741436349575	1541.7125974769062	1837.3129011501733	1633.9455750364393	1339.4308050149848	1728.4050949191449	1779.4312342305075	1659.0963343678975	0.9547640521402286	1.0182519708340265	0.9814223019516929	0.9292483899461368	1.1074178533762928	0.984840687782581	0.8073255164687573	1.0417750067404334	1.0725303873981835	1.0	10.696181942553109	-9.45614964633545	24.999960802349136	1.0432377116105866	0.9721462403255362	0.15774964464758223	0.07259968359983171	337.1049535192012	126295.69775955516	0.04077066280533066	0.01958556840951626	3.4982460599716765e-10	9.45614964633545	-0.07109147128505044	
SES(ph)PDHMVSQYQQALEEIER	ddPTM_K562_Methotrexat_30min_R1	2	SESPDHMVSQYQQALEEIER	20	0	Q14149;H0YHQ4;H0YIR5	Q14149	MORC3	MORC family CW-type zinc finger protein 3	1	S(0.493)ES(0.506)PDHMVS(0.001)QYQQALEEIER;S(0.353)ES(0.634)PDHMVS(0.013)QYQQALEEIER	96.12799999999999	0.00027198	9999500.0	1552.6	1068.62	1677.9299999999998	1318.24	1502.5500000000002	1034.06	1186.75	1608.48	1272.8	1482.9	True	False	1484.3495630307477	1245.191291565736	1325.7554232701732	1202.6719458996347	1700.1616615898854	1233.8774601794876	1452.9088969997379	1551.9088467048578	1213.6278058121575	1214.332440405205	1.22235848573348	1.0254121936742742	1.091756572712319	0.9903976093221396	1.4000792575569885	1.0160952792859266	1.1964671688379858	1.2779934020267205	0.9994197350168686	1.0	10.245947718173323	-6.008637341818377	12.893356701840741	1.1239185848448336	1.2985229072233508	0.05190957014775366	0.1327834594744543	186789.2859922806	5289646.653892559	0.031846802245187586	430406.03540826286	9.803082514162463e-07	6.008637341818377	0.1746043223785172	
SES(ph)PKEPEQLRK	ddPTM_K562_Methotrexat_30min_R1	1	SESPKEPEQLRK	12	2	F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8W646	F8W6I7	HNRNPA1	Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed	1	S(0.146)ES(0.854)PKEPEQLRK	116.63	0.024971	23461000.0	5345.9	2983.6	9132.1	5086.7	3309.8	2511.2	2255.0	3672.2	3545.3	5754.4	True	False	5110.900636999917	3476.5891874712547	7215.397007530434	4640.756908611236	3745.0967139397735	2996.453859546572	2760.741152504244	3543.046644577227	3380.479776827342	4712.222398723927	1.0846051405349528	0.7377812194120374	1.5312089279751246	0.9848340158707188	0.7947623004707818	0.6358897365196545	0.5858681783041171	0.7518844283615915	0.7173854480515984	1.0	12.202191915079286	-7.7372522264061825	3.5150382748654176	0.7159561500372591	1.10246370342812	0.39472820987907287	0.20696929980207657	0.22651551133294218	5.871149667018562	0.06424537268744043	0.08072988556163178	1.8312505730188317e-08	7.7372522264061825	0.38650755339086085	
SES(ph)PPAELPSLR	ddPTM_K562_Methotrexat_30min_R1	3	SESPPAELPSLR	12	0	H7C1L9;G5E9G6;Q14669;Q14669-2;Q14669-3	H7C1L9	TRIP12	E3 ubiquitin-protein ligase TRIP12	1	S(0.015)ES(0.985)PPAELPSLR;S(0.256)ES(0.731)PPAELPS(0.013)LR;S(0.016)ES(0.984)PPAELPSLR	147.24	7.0135e-09	96931000.0	5260.799999999999	4745.2	6816.1	5673.3	4687.3	4312.2	4635.5	5839.8	5656.1	5602.6	True	False	5029.541531104054	5529.263645390999	5385.493757517789	5175.930597366486	5303.762108662123	5145.471620395324	5675.128874693312	5634.410923969852	5393.14914554851	4587.914849696001	1.0962586917752661	1.205180093034502	1.173843441727049	1.1281662295256958	1.1560288894667596	1.1215272708769362	1.2369734532168468	1.2280984082220254	1.175512040269419	1.0	12.163622900283197	-8.68127444182726	24.71979518552062	1.1792095744108766	1.1502836123823355	0.0	0.0675967635390058	106.20745423700323	32742.17313434606	0.02458865526267367	0.019046287644246675	2.0831740559317705e-09	8.68127444182726	-0.02892596202854114	
SES(ph)PPAELPSLRR	ddPTM_K562_Methotrexat_30min_R1	1	SESPPAELPSLRR	13	1	H7C1L9;G5E9G6;Q14669;Q14669-2;Q14669-3	H7C1L9	TRIP12	E3 ubiquitin-protein ligase TRIP12	1	S(0.197)ES(0.803)PPAELPSLRR	84.62	0.018835	86499000.0	920.87	1133.7	1144.2	1304.1	849.03	1073.5	733.82	1239.7	972.18	1125.8	True	False	880.3896574186045	1321.0246553948782	904.048056418165	1189.7715777458682	960.6923267376534	1280.9386819939657	898.3978148694739	1196.099048331351	926.9835639962782	921.9067107749543	0.954966101373261	1.432926607383545	0.980628566699794	1.2905552848679742	1.0420710854030946	1.3894450132781975	0.9744997019430319	1.2974187456840518	1.0055069055924937	1.0	9.84847695918021	-9.815089683935302	15.580027581802245	1.0026378585787639	1.1732514763104351	0.1360514073994601	0.16876797890324435	5.721806431127944	1655.5080170878875	0.14417141298242223	0.037234982997799024	1.5307713172741442e-10	9.815089683935302	0.17061361773167127	
SES(ph)PPPLSDPK	ddPTM_K562_Methotrexat_30min_R1	4	SESPPPLSDPK	11	0	Q15059;Q15059-2	Q15059	BRD3	Bromodomain-containing protein 3	1	S(0.002)ES(0.998)PPPLSDPK;S(0.002)ES(0.998)PPPLSDPK;S(0.012)ES(0.987)PPPLSDPK;S(0.001)ES(0.999)PPPLSDPK	179.35	6.923999999999999e-08	125893000.0	14975.900000000001	12078.8	22715.300000000003	17435.7	10775.699999999999	9931.800000000001	10417.8	13467.499999999998	14248.7	18318.2	True	False	14317.577367636344	14074.616395504674	17947.66895294141	15907.139251670618	12192.893425705724	11850.979787450093	12754.256841932904	12993.84039154833	13586.28104704249	15000.596473012749	0.9544672035805236	0.9382704495001924	1.1964636863094529	1.0604337821025192	0.8128272397462126	0.7900339035698305	0.8502499793844074	0.8662215809168169	0.9057160541239327	1.0	13.872732247707177	-7.7561645097446155	24.99761279604672	0.8590825811434782	1.0416885670516636	0.4781819104352435	0.08466302260088208	110.70698369237046	524637.1996863707	0.026326127137928753	0.0329649287402669	1.7532162617810793e-08	7.7561645097446155	0.18260598590818533	
SES(ph)SGILPNTTDMR	ddPTM_K562_Methotrexat_30min_R1	2	SESSGILPNTTDMR	14	0	Q92667-2;Q92667;I3L0K6;I3L2A2;I3L2N7	Q92667-2	AKAP1	A-kinase anchor protein 1, mitochondrial	1	S(0.002)ES(0.931)S(0.059)GILPNT(0.005)T(0.002)DMR;SES(0.962)S(0.038)GILPNTTDMR	121.56	5.3583999999999994e-05	0.0	3723.0	2995.6000000000004	3448.2	3361.1	2788.0	2735.8	2662.4	2649.4	3890.8999999999996	3872.0	True	False	3559.3413777943288	3490.5719835061304	2724.46994244111	3066.4375814443974	3154.6708678663617	3264.4546308328745	3259.5109731384896	2556.2191003057837	3710.0129082609387	3170.7432795528707	1.1225574144546502	1.1008686846443023	0.8592527689044908	0.9671037075814027	0.9949310271222035	1.0295550106135425	1.0279958627234358	0.8061892354357539	1.1700767237088063	1.0	11.63060535847435	-6.596547038322369	11.9080833968186	0.9782737237564147	1.117140255235354	0.23818788522864698	0.0930449577578763	0.6844450060904952	107.47971448519608	0.022410061274531254	0.05933498414109717	2.531937386949424e-07	6.596547038322369	0.13886653147893924	
SESADQTVS(ph)PPTPFAR	ddPTM_K562_Methotrexat_30min_R1	2	SESADQTVSPPTPFAR	16	0	F5H212;P15822	F5H212	HIVEP1	Zinc finger protein 40	1	SESADQT(0.071)VS(0.912)PPT(0.017)PFAR;SESADQT(0.243)VS(0.667)PPT(0.09)PFAR	141.1	1.5288999999999999e-06	18846800.0	2990.4	2240.7	3311.4	3258.6	2364.4700000000003	2477.9	2344.4900000000002	2622.3	2772.8	3080.8	True	False	2858.945596603856	2610.937589612159	2616.3823929584983	2972.92359730288	2675.4392492625475	2956.7191058340463	2870.3015630308964	2530.072222666211	2643.893133214919	2522.8372664376243	1.1332263220611267	1.0349211280277848	1.0370793343531683	1.1784048209739666	1.0604882387203693	1.171981699005535	1.137727589970125	1.0028677855384636	1.0479840171967303	1.0	11.300831434109378	-9.267952170687913	24.918971627637763	1.0190694202040111	1.1055524088508468	0.4112167563536251	0.049690767325088814	560.6447290162099	2145100.695658411	0.0272280686982568	0.013530397064430134	5.395700426643588e-10	9.267952170687913	0.08648298864683568	
SESDLEDVGPTAEWNGDGS(ph)GSLRR	ddPTM_K562_Methotrexat_30min_R1	1	SESDLEDVGPTAEWNGDGSGSLRR	24	1	Q9H0B6;Q9H0B6-2;A8MZ87	Q9H0B6	KLC2	Kinesin light chain 2	1	SESDLEDVGPTAEWNGDGS(0.5)GS(0.5)LRR	82.773	0.00052384	9161200.0	1670.3	1118.1	2162.6	1419.4	1476.2	1471.1	1375.2	1591.2	1503.6	1815.0	True	False	1596.875611960749	1302.8470205495405	1708.6998136776122	1294.9634057606677	1670.3461747289532	1755.3692548498593	1683.6236066181082	1535.236594099255	1433.6979641885293	1486.2859122904074	1.0744067468821794	0.8765790012379364	1.1496440890329498	0.8712747628517137	1.1238390681876973	1.1810441317746105	1.132772364116402	1.0329349026348593	0.9646178789242249	1.0	10.537495954082868	-5.88879653750344	21.076031176721877	1.0423709972252844	8.143900515283047	0.008978535834035739	0.10499428757809864	9453.41050082986	1782800.6952527685	0.025649345922100948	16071.956581673478	1.2918243382808118e-06	5.88879653750344	7.101529518057762	
SESDLEDVGPTAEWNGDGSGS(ph)LRR	ddPTM_K562_Methotrexat_30min_R1	1	SESDLEDVGPTAEWNGDGSGSLRR	24	1	Q9H0B6;Q9H0B6-2;A8MZ87	Q9H0B6	KLC2	Kinesin light chain 2	1	SESDLEDVGPTAEWNGDGS(0.096)GS(0.904)LRR	91.926	5.9841000000000005e-05	11839000.0	1348.6	1142.8	2179.3	1691.8	1231.4	1102.8	1256.8	1924.5	1440.9	1556.4	True	False	1289.317158768045	1331.6282757213257	1721.8947118966148	1543.482520688951	1393.3506838919084	1315.9004923176012	1538.6693926684402	1856.814244183017	1373.912873503094	1274.5208781756428	1.0116092885144272	1.0448069533607223	1.3510133426463329	1.2110296089447365	1.0932348835951273	1.032466799760228	1.2072531874651604	1.4568723635511351	1.0779838110378557	1.0	10.315739291285249	-8.976025370598302	24.31136876970206	1.226869454927499	1.132178608767425	0.01028615147466605	0.14638099918806538	452.95330695237726	459314.2135274181	0.06206593604019123	0.04184204779481741	1.0567557738923879e-09	8.976025370598302	-0.09469084616007395	
SESGGLGVSMVEYVLSSS(ph)PGDSCLRK	ddPTM_K562_Methotrexat_30min_R1	1	SESGGLGVSMVEYVLSSSPGDSCLRK	26	1	Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2	Q5T1Z4	PUM1	Pumilio homolog 1	1	SESGGLGVSMVEYVLS(0.009)S(0.074)S(0.752)PGDS(0.164)CLRK	106.36	5.0278e-08	7082900.0	698.68	720.34	1122.1	1029.8	698.81	564.48	609.82	869.84	1132.6	1206.7	True	False	667.9668637758105	839.3639413135281	886.5865444037955	939.5190328676446	790.7157636921418	673.5577710404788	746.5876583681325	839.2472341699946	1079.9456732109127	988.1549368379259	0.6759738163261014	0.8494254392934314	0.8972141021132304	0.9507810949911204	0.8001941135085707	0.6816317420786753	0.7555370423561274	0.8493073331754708	1.092891036568329	1.0	9.948593455352883	-9.67820411943954	5.283878017294599	1.044940679442184	0.8081172105198059	0.565028647319423	0.08436729542452376	0.15703601767787653	7.160727334972707	0.06758400006122928	0.023660972777072582	2.0979536086794655e-10	9.67820411943954	-0.23682346892237816	
SESSTSAFST(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	2	SESSTSAFSTPTR	13	0	Q8WWQ0	Q8WWQ0	PHIP	PH-interacting protein	1	SESSTSAFS(0.026)T(0.973)PT(0.001)R;SESSTSAFS(0.003)T(0.983)PT(0.015)R	136.27	5.3483e-05	45558000.0	5612.6	4809.2	6790.7	5868.1	5110.3	4455.1	5024.299999999999	5684.7	5953.799999999999	7096.3	True	False	5365.876824337484	5603.838557577006	5365.424870406252	5353.652783813	5782.394022976139	5315.985022963503	6151.1271718523585	5484.765878881367	5677.009137527046	5811.091305447066	0.923385392225337	0.9643349696337089	0.9233076178611984	0.9212818216768883	0.9950616362809466	0.9147997757289631	1.0585149756787606	0.9438443814744718	0.9769265081423971	1.0	12.504593407519355	-8.137813739182034	1.3490203494334285	0.9851856231563332	0.9362583703042489	0.25173158338393387	0.037986224354699595	0.6368575757143748	2.3622771922538437	0.016449227736327555	0.01647129214587171	7.280920026890113e-09	8.137813739182034	-0.048927252852084324	
SETAPAETATPAPVEKS(ph)PAK	ddPTM_K562_Methotrexat_30min_R1	2	SETAPAETATPAPVEKSPAK	20	1	P16401	P16401	HIST1H1B	Histone H1.5	1	SETAPAETAT(0.001)PAPVEKS(0.999)PAK;SETAPAETAT(0.001)PAPVEKS(0.999)PAK	111.58	0.00011665	289010000.0	10310.8	7331.900000000001	19204.1	11644.900000000001	7940.200000000001	6729.4	5652.8	8282.400000000001	8774.6	12482.0	True	False	9857.549577803322	8543.371854008747	15173.421849554348	10624.009696873612	8984.47547526273	8029.761310302928	6920.5842957321465	7991.103297490993	8366.670761218853	10221.38884694704	0.9644041260349476	0.8358327798634244	1.48447750856151	1.039390033581085	0.8789877393174651	0.7855841735931302	0.6770688797148354	0.7818021031337442	0.8185453940261591	1.0	13.319303617553961	-7.82442935713424	3.2833844314919354	0.7946675977998819	1.0958337376429461	0.35430445587763615	0.1716038891858496	0.26260574009521903	5.723794577754815	0.056886548801059054	0.06794437184125747	1.498202932727026e-08	7.82442935713424	0.3011661398430642	
SETST(ph)SDNTETYQENTSSSGHPTFK	ddPTM_K562_Methotrexat_30min_R1	1	SETSTSDNTETYQENTSSSGHPTFK	25	0	J3QLQ3;Q8WVD3-2;Q8WVD3	J3QLQ3	RNF138	E3 ubiquitin-protein ligase RNF138	1	SET(0.008)S(0.028)T(0.539)S(0.422)DNT(0.002)ETYQENTSSSGHPTFK	127.25	2.7014e-10	17360000.0	2016.0	1380.1	2231.3	2178.7	1194.6	1301.5	1252.1	1493.8	1479.9	2412.4	True	False	1927.3790538902401	1608.1380673109916	1762.9806225186603	1987.6967536499678	1351.7108388641163	1552.996455160826	1532.915298026857	1441.2622073061002	1411.0997720155653	1975.4909833660492	0.975645583867039	0.8140447518372759	0.8924265599606578	1.0061786008575555	0.684240449713888	0.786131887331962	0.7759667398809965	0.7295716454500472	0.714303322008175	1.0	10.94799554617242	-7.763869350550519	24.999385600022855	0.768115624835647	0.9122398394246546	0.3411256812457567	0.09404930241796655	69.48085207173183	714816.9201442882	0.027282580345462635	0.03241454500804218	1.7223866451708042e-08	7.763869350550519	0.1441242145890076	
SETSTS(ph)DNTETYQENTSSSGHPTFK	ddPTM_K562_Methotrexat_30min_R1	1	SETSTSDNTETYQENTSSSGHPTFK	25	0	J3QLQ3;Q8WVD3-2;Q8WVD3	J3QLQ3	RNF138	E3 ubiquitin-protein ligase RNF138	1	S(0.001)ET(0.011)S(0.041)T(0.186)S(0.74)DNT(0.015)ET(0.005)Y(0.001)QENTSSSGHPTFK	99.494	1.1811e-06	14704000.0	3103.3	2156.5	4749.4	3377.3	2352.3	2196.6	2232.4	3196.3	3195.8	4442.0	True	False	2966.8826477865023	2512.824970767449	3752.5658443912216	3081.2173525965227	2661.66868094765	2621.061862010197	2733.0725272064174	3083.8843173199125	3047.227955542499	3637.510756139942	0.815635429470153	0.6908089457951216	1.0316301712804758	0.8470675577785103	0.731728057835948	0.720564704196674	0.7513579231602611	0.8478007417887261	0.8377234212706933	1.0	11.828735798746736	-10.313660190925338	1.5225401974586488	0.9995470853219958	0.8016546587998888	0.29339206954537467	0.09114020623848858	1.6425826625717537	5.9407297838529	0.09204458405911305	0.026676120980356658	4.856683575495288e-11	10.313660190925338	-0.19789242652210692	
SETSWES(ph)PKQIK	ddPTM_K562_Methotrexat_30min_R1	2	SETSWESPKQIK	12	1	Q86UE4;E5RJU9	Q86UE4	MTDH	Protein LYRIC	1	S(0.011)ET(0.002)S(0.001)WES(0.986)PKQIK;SETS(0.015)WES(0.985)PKQIK	134.56	0.00011576	24130900.0	5874.6	3956.4	9701.1	7042.1	3626.1	3578.08	2998.06	4591.5	4835.9	7993.1	True	False	5616.359618047423	4610.127852698504	7664.971683375517	6424.730026565589	4102.995708023748	4269.493320231922	3670.4512725839786	4430.014342513026	4611.080064524679	6545.472135277388	0.8580526357720734	0.7043231958550128	1.1710341935556474	0.9815533385191499	0.6268448819620358	0.6522819488026109	0.5607618819125001	0.6768059279692111	0.7044686722708458	1.0	12.676281544465393	-7.761537614639486	24.99999995278548	0.6776669683681061	0.9300177001757807	0.3305716453836036	0.15439353837686226	2.8417441333999607	723242.4020986363	0.04697471319964289	0.05675027007456304	1.7316590436925565e-08	7.761537614639486	0.25235073180767453	
SEVQQPVHPKPLS(ph)PDSR	ddPTM_K562_Methotrexat_30min_R1	1	SEVQQPVHPKPLSPDSR	17	1	Q9UHB6;F8VRN8;F8VS07;F8VQE1;Q9UHB6-3;Q9UHB6-2;Q9UHB6-4;Q9UHB6-5	Q9UHB6	LIMA1	LIM domain and actin-binding protein 1	1	SEVQQPVHPKPLS(0.974)PDS(0.026)R	96.59100000000001	0.001661	160920000.0	2268.2	1677.3	3429.7	2638.8	1988.2	1870.2	1575.0	2328.2	2760.6	2625.2	True	False	2168.4926438659954	1954.4453157747457	2709.85283962365	2407.460501001302	2249.683149028658	2231.5896814765865	1928.2338426581744	2246.3158863636777	2632.2603085520445	2149.7508412918887	1.0087181278007287	0.9091496922500216	1.260542751082339	1.1198788504971782	1.0464855302378742	1.0380689885603287	0.8969568964091699	1.044919180035654	1.2244490189245338	1.0	11.069953744075564	-7.9809778797348905	23.329812233584157	1.0355340244594822	1.0769328354946561	0.01917903925258513	0.11162932431664994	557.8692106538709	684193.2115711947	0.036751132820720164	0.04166275228626401	1.0447734321390257e-08	7.9809778797348905	0.041398811035173955	
SEWLDPSQKS(ph)PLHVGETR	ddPTM_K562_Methotrexat_30min_R1	1	SEWLDPSQKSPLHVGETR	18	1	O15164-2;O15164	O15164-2	TRIM24	Transcription intermediary factor 1-alpha	1	SEWLDPS(0.045)QKS(0.954)PLHVGETR	88.992	0.0039548000000000005	21758000.0	3222.5	2788.6	4495.3	3584.7	2251.6	2609.1	2206.9	3101.7	2973.4	4474.1	True	False	3080.8427585125505	3249.368751904524	3551.7979619092625	3270.4349166057937	2547.724865885188	3113.271648989714	2701.85350308719	2992.6114529397046	2835.167282999582	3663.797135084582	0.8408879217166118	0.8868855540031174	0.969430847548077	0.8926353714533086	0.6953782570241492	0.8497390914952613	0.7374462622982577	0.8168059918717682	0.7738330421872907	1.0	11.839123908099689	-7.560203402968525	24.99835880400417	0.8005277841070543	0.9033804816210058	0.19916231655199867	0.08170940089244974	212.04660792805257	142018.03843123862	0.022543639304504436	0.029103777252790092	2.752939055073653e-08	7.560203402968525	0.10285269751395154	
SFAGAVSPQEEEEFRR	ddPTM_K562_Methotrexat_30min_R1	1	SFAGAVSPQEEEEFRR	16	1	B1AHB1;P33992	B1AHB1	MCM5	DNA helicase;DNA replication licensing factor MCM5	0		133.47	5.1426000000000005e-05	15378000.0	2375.1	2217.4	2321.5	2353.5	2160.1	2042.9	1716.1	2346.1	2663.9	2612.4	False	True	2270.693447864439	2583.7876606444415	1834.2488751745934	2147.1723090444775	2444.1910120796742	2437.66151229201	2100.9791094512343	2263.58633321786	2540.0558704454797	2139.2690453264263	1.0614342561657357	1.2077899534371972	0.8574185089910977	1.0036943757660202	1.1425355858906099	1.139483375229249	0.9821013930160667	1.0581120397936972	1.1873475549953083	1.0	11.062902219221757	-7.740711555935169	24.969451960367195	1.0854218610835045	1.0325871340601747	0.0626682052417018	0.0991656936430764	812.4267149313	978673.9582902417	0.030313087391182547	0.039088330148946096	1.816721868888119e-08	7.740711555935169	-0.05283472702332981	
SFAGPGAPFPMNRS(ph)SGTPGR	ddPTM_K562_Methotrexat_30min_R1	1	SFAGPGAPFPMNRSSGTPGR	20	1	J3QRL0;Q5T2W7;Q5T2W9;Q96HA4-2;Q96HA4-3;Q96HA4-4;Q96HA4	J3QRL0	C1orf159	Uncharacterized protein C1orf159	1	SFAGPGAPFPMNRS(0.333)S(0.333)GT(0.333)PGR	72.446	0.01204	0.0	0.0	0.0	64.203	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	50.72766768590758	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
SFAPSTPLT(ph)GRR	ddPTM_K562_Methotrexat_30min_R1	1	SFAPSTPLTGRR	12	1	P28749;P28749-2;H0YE05	P28749	RBL1	Retinoblastoma-like protein 1	1	SFAPS(0.001)T(0.001)PLT(0.999)GRR	111.79	0.007147800000000001	11888000.0	2816.6	2483.8	2785.9	3012.6	2743.9	2466.3	2234.3	2652.7	2840.3	3123.7	True	False	2692.785636501613	2894.2057326186814	2201.177661576093	2748.490035363244	3104.770944884687	2942.8775700062583	2735.3986505721655	2559.403037435325	2708.255072948045	2557.967660728126	1.052705113455231	1.1314473505872413	0.8605181743969068	1.0744819324967094	1.2137647369634508	1.1504748926999993	1.0693640473130666	1.0005611395050986	1.0587526631111277	1.0	11.32078230963141	-5.479891605502015	18.307496986078167	1.0649117340430776	1.0618697473166603	0.0	0.09183401649616098	0.0	0.0	0.022136909572153987	0.0	3.312137780042506e-06	5.479891605502015	-0.0030419867264173117	
SFCPIELNINGS(ph)PGAESDLATFCTSK	ddPTM_K562_Methotrexat_30min_R1	1	SFCPIELNINGSPGAESDLATFCTSK	26	0	Q9BYW2;H7BZ93;C9JG86;H7BXT4;H7C3H4;Q9BYW2-3;Q9BYW2-2	Q9BYW2	SETD2	Histone-lysine N-methyltransferase SETD2	1	SFCPIELNINGS(0.999)PGAES(0.001)DLATFCTSK	100.86	3.7567000000000003e-07	3373400.0	1069.7	701.62	1813.8	1416.8	906.01	785.64	849.22	1399.8	1107.7	1645.4	True	False	1022.6772688226147	817.5507794991216	1433.1081670435842	1292.5913437239074	1025.1661954790543	937.4538110123328	1039.6792024521744	1350.568240585807	1056.2032687760275	1347.4021157480095	0.7589993045653457	0.6067607954179728	1.0636083692417204	0.9593211474262278	0.7608465086236962	0.6957491012190565	0.771617611625166	1.0023497995147794	0.7838812604132486	1.0	10.395964754482703	-15.99999999987332	0.1687608375004596	1.6823880396680218	0.7832816580268265	0.14192864277958062	0.13489205954698263	296.9871852125931	2.79123292514927	67.65741098076604	0.5343617489184871	1.0000000002916935e-16	15.99999999987332	-0.8991063816411953	
SFDYNY(ph)RR	ddPTM_K562_Methotrexat_30min_R1	1	SFDYNYRR	8	1	O75494-6;O75494-3;Q5JRI1;O75494-5;O75494-4;O75494-2;O75494	O75494-6	SRSF10	Serine/arginine-rich splicing factor 10	1	S(0.002)FDYNY(0.998)RR	75.738	0.020803	184660000.0	4291.1	3776.2	5407.7	4347.5	4368.7	3913.1	3676.2	4803.1	4787.8	4780.7	True	False	4102.4683820180635	4400.152865574788	4272.697670593003	3966.3614249291986	4943.26062426391	4669.251193768593	4500.681430082525	4634.172250577005	4565.2162230259655	3914.8689040698346	1.0479197343628042	1.1239591857087372	1.091402490170533	1.0131530639010244	1.2626886737190552	1.1926966925800542	1.1496378398274563	1.1837362537885736	1.1661223746930685	1.0	11.934748281931919	-7.749378709859875	24.99999940384649	1.169535826165196	1.074618950223652	0.28990819146560787	0.06765544552039034	267.9451097660699	555408.8488137965	0.019135367702393727	0.024511437848809905	1.7808251898157663e-08	7.749378709859875	-0.09491687594154397	
SFEVEEVETPNS(ph)TPPRR	ddPTM_K562_Methotrexat_30min_R1	1	SFEVEEVETPNSTPPRR	17	1	K7ENL0;K7EJV0;K7EPY1;Q9UHD8-7;Q9UHD8-2;Q9UHD8-5;Q9UHD8	K7ENL0	SEPT9	Septin-9	1	SFEVEEVET(0.007)PNS(0.497)T(0.497)PPRR	100.39	0.0011223	20721000.0	1759.9	1547.1	2217.0	1995.6	1696.1	1408.1	1632.5	1638.2	2185.5	2135.5	True	False	1682.5369032447586	1802.7319787963443	1751.6819970975982	1820.64884636888	1919.166879120565	1680.1953964748043	1998.6296813583936	1580.5835774594007	2083.896582025825	1748.7402565819102	0.9621422603568623	1.0308746379064702	1.0016822055217267	1.0411202232671892	1.097456796054876	0.9608032926278692	1.142896821775532	0.9038412488706649	1.1916558643757718	1.0	10.772100303841897	-4.510218473680896	0.7284421947327312	1.0457616597984731	3.5520927697197177e-09	0.08831868874823134	0.0801471687225358	79.68098646841968	3.9764592162990824	0.027887342553357862	117.0295049610472	3.0887412372458416e-05	4.510218473680896	-1.0457616562463803	
SFHFDPLSSGS(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	SFHFDPLSSGSR	12	0	Q9C0B5-2;Q9C0B5;H0YEF4	Q9C0B5-2;H0YEF4	ZDHHC5	Palmitoyltransferase ZDHHC5;Palmitoyltransferase	1	SFHFDPLS(0.007)S(0.02)GS(0.974)R;SFHFDPLS(0.002)S(0.005)GS(0.994)R	99.238	0.0061284	36298000.0	10303.0	9002.3	8077.7	9848.4	9117.5	8292.2	8071.0	11221.5	11268.0	11160.1	True	False	9850.092456463866	10489.777062063433	6382.301158301879	8985.006062627413	10316.611060893672	9894.55029234314	9881.12720259945	10826.833484593255	10744.15313944955	9138.897746419936	1.0778206223307985	1.1478164383853282	0.6983666231304618	0.9831608047203715	1.128868201303061	1.0826853048245586	1.0812165183126459	1.1846979564723272	1.1756508758026596	1.0	13.157804455233306	-7.734758475022624	7.15104651489508	1.1154807554661228	0.9683771720799402	0.226312351700641	0.1189201011621873	0.26822614661959837	49.071984652396004	0.03703268960456999	0.046844635672534926	1.8417959980506616e-08	7.734758475022624	-0.14710358338618257	
SFLSEPS(ph)SPGRTK	ddPTM_K562_Methotrexat_30min_R1	2	SFLSEPSSPGRTK	13	1	Q69YN4;Q69YN4-3;H0YC41	Q69YN4	KIAA1429	Protein virilizer homolog	1	SFLSEPS(0.499)S(0.499)PGRT(0.001)K;SFLSEPS(0.5)S(0.5)PGRTK	143.55	2.9926999999999997e-06	49487000.0	10108.5	7744.400000000001	13822.6	14026.0	7632.7	7592.6	7825.1	8109.9	9221.7	13604.7	True	False	9664.14244357614	9024.030467707595	10921.425157005535	12796.362356769847	8636.533835424523	9059.762493625885	9580.077868053637	7824.670220264917	8792.9851798067	11140.75699776161	0.8674583285065683	0.8100015528137535	0.9803126627032488	1.1486079769391686	0.7752196585169003	0.813208877587597	0.8599126495603896	0.7023463685490171	0.7892628105588676	1.0	13.443559644526491														
SFLSEPSS(ph)PGR	ddPTM_K562_Methotrexat_30min_R1	6	SFLSEPSSPGR	11	0	Q69YN4;Q69YN4-3;H0YC41	Q69YN4	KIAA1429	Protein virilizer homolog	1	SFLSEPS(0.002)S(0.998)PGR;SFLSEPS(0.002)S(0.998)PGR;SFLSEPS(0.005)S(0.995)PGR;SFLSEPS(0.006)S(0.994)PGR;SFLSEPS(0.002)S(0.998)PGR;SFLSEPS(0.002)S(0.998)PGR	174.23	1.5255999999999998e-07	1593878000.0	34260.8	30389.500000000004	39637.200000000004	34357.4	33006.4	30916.5	30392.200000000004	36193.100000000006	35951.4	34889.2	True	False	32754.736254723608	35410.84834182119	31317.89339438744	31345.340085304735	37347.320133839436	36890.67607067205	37208.4245033878	34920.16815855563	34280.02726105844	28570.42779673967	1.1464559259578686	1.2394231053782863	1.0961646642883414	1.0971253321198686	1.3072019921977278	1.29121889014493	1.3023404748469976	1.2222486973940434	1.199842981174063	1.0	14.802235018050341	-6.235410477256582	21.53165791911801	1.2057186934663675	1.146455444437319	0.011551965702819467	0.09721288569845551	5281.16890413409	4368231.932903464	0.024699476684870922	1.3330265961661478	5.815532977069265e-07	6.235410477256582	-0.05926324902904856	
SFLVASVLPGPDGNINS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	2	SFLVASVLPGPDGNINSPTR	20	0	Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-3;Q7Z3K3-6;Q7Z3K3	Q7Z3K3-5	POGZ	Pogo transposable element with ZNF domain	1	SFLVASVLPGPDGNINS(0.998)PT(0.002)R;SFLVASVLPGPDGNINS(0.961)PT(0.039)R	202.21	4.4731000000000006e-21	38926000.0	5996.0	4685.3	5853.5	5388.0	5330.9	4730.0	4955.8	6935.9	6707.4	7400.3	True	False	5732.423019407681	5459.466188516916	4624.9303428104595	4915.64240540966	6032.0067896372975	5644.0055573651225	6067.264303139927	6691.960465694458	6395.574438014195	6060.033959626834	0.9459390916945741	0.9008969627709974	0.7631855487316863	0.8111575674589712	0.9953750803747538	0.9313488331858573	1.0011931193061396	1.1042777169695164	1.0553694056209584	1.0	12.565110163054694	-8.423197742441824	1.2016400542768109	1.0560572204396295	0.8595030524850141	0.6005834373151531	0.06289171560204654	0.32599371945198247	0.9636265386934277	0.036879695850006965	0.028736614637993572	3.774003143412747e-09	8.423197742441824	-0.19655416795461533	
SFPIKPVPSPS(ph)WSGSCR	ddPTM_K562_Methotrexat_30min_R1	1	SFPIKPVPSPSWSGSCR	17	1	Q9P0U3;Q9P0U3-2	Q9P0U3	SENP1	Sentrin-specific protease 1	1	SFPIKPVPS(0.063)PS(0.932)WS(0.004)GS(0.001)CR	135.09	2.324e-14	0.0	361.75	327.45	492.06	520.52	287.83	360.48	271.32	502.51	412.26	539.94	True	False	345.84790314721965	381.55554680166955	388.78333039776464	474.88681975943507	325.68469006383606	430.1376582069722	332.1704166285815	484.8364384746206	393.09412258337545	442.1516338744257	0.7821929778177479	0.862951796555012	0.8792986401316385	1.074036107473271	0.736590493197935	0.9728283811547204	0.7512590504707268	1.0965388371997233	0.8890482189081247	1.0	8.788397409895413	-3.0000000001311253	0.10485643146478102	1.0454532288307443	0.4134884107887468	0.14048047111630002	0.11303277613211676	251.4038220864622	1.85871366134332	1.1953126569192132	22.911077965790344	0.0009999999996980727	3.0000000001311253	-0.6319648180419974	
SFS(ph)ASQSTDREGAS(ph)PVTEVR	ddPTM_K562_Methotrexat_30min_R1	1	SFSASQSTDREGASPVTEVR	20	1	Q9ULJ3;Q9ULJ3-2	Q9ULJ3	ZBTB21	Zinc finger and BTB domain-containing protein 21	2	S(0.008)FS(0.634)AS(0.102)QS(0.302)T(0.199)DREGAS(0.544)PVT(0.211)EVR	106.73	0.0046906000000000005	16474000.0	2758.5	1939.8	2368.8	2692.9	2088.6	2345.8	1951.4	2271.5	2757.9	3133.0	True	False	2637.2396429346372	2260.3189790376523	1871.6212515673396	2456.817637996972	2363.2875088327405	2799.0926504158783	2389.0511241670856	2191.6100575015435	2629.6858309627187	2565.5833406092825	1.027929828351761	0.8810156128083	0.7295109934424743	0.9576058587180877	0.9211501616125632	1.091016068786579	0.9311921723032885	0.8542345995203856	1.0249855420164262	1.0	11.325071175570809	-7.479883794581025	24.99049441675218	0.9646789600181894	0.8736251319448551	0.1698984673642573	0.08982930825567702	848.6949166521895	493297.3257325661	0.025878135007667533	0.03838030545478905	3.3121973504037125e-08	7.479883794581025	-0.09105382807333429	
SFS(ph)ASQSTDREGASPVTEVR	ddPTM_K562_Methotrexat_30min_R1	1	SFSASQSTDREGASPVTEVR	20	1	Q9ULJ3;Q9ULJ3-2	Q9ULJ3	ZBTB21	Zinc finger and BTB domain-containing protein 21	1	S(0.07)FS(0.831)AS(0.046)QS(0.038)T(0.015)DREGASPVTEVR	62.707	0.017456	60488000.0	969.72	862.63	1126.1	943.86	760.98	653.39	765.66	900.67	575.34	1122.9	True	False	927.0922699099423	1005.1649452970661	889.7469990670305	861.1132592371875	861.0622084034949	779.6483702170817	937.3787453775608	868.9929255953843	548.5925689786034	919.5319288765281	1.0082219450961873	1.0931267460447656	0.9676085964237388	0.9364691232519617	0.9364136049691382	0.8478752566750409	1.0194085881529287	0.9450383377737719	0.5965998044775525	1.0	9.84475585993351	-7.247968180214212	0.5949653379566533	0.8692302300710582	1.0848465590470102	0.23340529899770812	0.11246316751935842	2.167941147189614	1.2333948441198115	0.07045210611691437	0.28069167397388634	5.649783679978588e-08	7.247968180214212	0.21561632897595207	
SFS(ph)EDTLMDGPAR	ddPTM_K562_Methotrexat_30min_R1	3	SFSEDTLMDGPAR	13	0	M0QZQ6;Q9BRG2	M0QZQ6	SH2D3A	SH2 domain-containing protein 3A	1	S(0.002)FS(0.974)EDT(0.025)LMDGPAR;S(0.003)FS(0.918)EDT(0.079)LMDGPAR;SFS(0.901)EDT(0.099)LMDGPAR	152.0	1.4285e-09	61843000.0	6314.4	5721.299999999999	7291.0	7141.6	5606.9	5216.5	5363.3	6130.2	6038.9	7151.6	True	False	6036.826536649074	6666.6475795278475	5760.718737410279	6515.507016049303	6344.305627345734	6224.514797039147	6566.156551319738	5914.59739136956	5758.1528571016925	5856.375939579108	1.0308126730475802	1.138357176572748	0.9836661438480495	1.1125493109169435	1.083315977799351	1.0628612065308256	1.1211979249733142	1.0099415495847823	0.9832280093541136	1.0	12.515792452484515	-9.422879293944622	6.1140559987097	0.9931238382346497	1.0759498016422464	0.41821602466382735	0.04269220094604114	0.2104689520112938	10.615476618287035	0.02255029675292119	0.010545402298110188	3.7767714640096053e-10	9.422879293944622	0.08282596340759674	
SFS(ph)MQDLR	ddPTM_K562_Methotrexat_30min_R1	2	SFSMQDLR	8	0	E5RGS2;Q9H6H4	E5RGS2	REEP4	Receptor expression-enhancing protein;Receptor expression-enhancing protein 4	1	S(0.002)FS(0.998)MQDLR;S(0.001)FS(0.999)MQDLR	117.14	0.007273399999999999	25788000.0	7869.700000000001	7927.9	10767.8	7976.4	6772.0	7789.0	7328.8	8032.7	7477.299999999999	7886.4	True	False	7523.757410912714	9237.8507237409	8507.785930693517	7277.121396159913	7662.636699135943	9294.114014020492	8972.469959411574	7750.185388022299	7129.6819550591135	6458.096539221527	1.1650116044594843	1.430429332797563	1.3173828974255415	1.1268214019354243	1.186516282715652	1.4391413874932295	1.3893366110152845	1.2000727057815899	1.1039912320540413	1.0	12.656893291983623	-9.780815359787233	2.286535366198984	1.0111961295318743	1.2942827466900915	0.4655200459465648	0.10416956484658231	0.26727438855185165	2.6750781525130076	0.10347589137673768	0.029521217491330597	1.6564740634041678e-10	9.780815359787233	0.28308661715821715	
SFS(ph)PVLGPRPR	ddPTM_K562_Methotrexat_30min_R1	2	SFSPVLGPRPR	11	1	Q9ULC8-2;Q9ULC8;Q9ULC8-3	Q9ULC8-2	ZDHHC8	Probable palmitoyltransferase ZDHHC8	1	S(0.087)FS(0.913)PVLGPRPR;S(0.052)FS(0.948)PVLGPRPR	77.74	0.026251	45882000.0	4758.3	4365.6	5194.6	5471.4	4695.0	3972.6000000000004	4712.4	5221.7	4871.2	5504.5	True	False	4549.130829427549	5086.941197487767	4104.324448409194	4991.7308568965145	5312.474793627181	4740.248726678369	5769.27565723326	5038.049851312268	4644.738975229556	4507.581710304434	1.009217607531802	1.1285300022091456	0.9105380029000063	1.1074077360561885	1.1785642801510936	1.0516168161393622	1.2799048421118058	1.1176835330117638	1.0304281261527832	1.0	12.138137928728476	-7.4935844103799605	24.649240002855024	1.1231713771840397	1.024277694795905	0.17408206317206687	0.08977109249579741	933.045697458111	785095.9323720511	0.02462430448719969	0.03644968306040031	3.209338969781868e-08	7.4935844103799605	-0.09889368238813478	
SFS(ph)QPEAGGSHHK	ddPTM_K562_Methotrexat_30min_R1	1	SFSQPEAGGSHHK	13	0	B7WPG3;V9GYK2;Q8WVV9-2;Q8WVV9-5;Q8WVV9;C9IYN3;Q8WVV9-3;Q8WVV9-4	B7WPG3	HNRNPLL	Heterogeneous nuclear ribonucleoprotein L-like	1	S(0.367)FS(0.633)QPEAGGS(0.001)HHK	83.964	0.021016999999999997	5497400.0	1644.4	1666.5	1952.2	2011.9	1517.8	1312.7	1292.8	1399.8	1295.1	1905.3	True	False	1572.114144948964	1941.860799343358	1542.459898391489	1835.519850676263	1717.417303890805	1566.3606966497239	1582.7433090720554	1350.568240585807	1234.8910836795458	1560.2317072655171	1.0076158160535478	1.244597703213383	0.9886095066577162	1.1764405518288175	1.100745034146738	1.0039282558838318	1.0144283709283106	0.8656203013287244	0.7914792898574228	1.0	10.607544581762294	-8.851371018178302	1.4690732494912313	0.8732104249464908	1.107011312250906	0.5151524144836432	0.08788859340393365	0.30057813072010425	1.2992086202727298	0.05226669696784139	0.028540110109325265	1.4080853558198108e-09	8.851371018178302	0.23380088730441517	
SFS(ph)SPENFQR	ddPTM_K562_Methotrexat_30min_R1	2	SFSSPENFQR	10	0	I3L521;F5GXV8;J3KPD3;G3V1T9;F5GY08;Q9Y580	I3L521;F5GY08	RBM7	RNA-binding protein 7	1	S(0.001)FS(0.961)S(0.039)PENFQR;S(0.323)FS(0.666)S(0.011)PENFQR	117.86	0.0035711999999999996	37720000.0	2841.7	2385.2	3772.7	3086.6	3031.2	3146.8	2598.6000000000004	3026.7	2759.2	3396.3	True	False	2716.782270555505	2779.3137585321183	2980.8618269959884	2816.002570255653	3429.855930658721	3754.874564041558	3181.4021990676397	2920.2492454501075	2630.925394246467	2781.197159180116	0.9768391505751428	0.9993228093730137	1.0717909074359664	1.0125145428689413	1.2332300568255385	1.3500929093241552	1.143896680811188	1.0499972056317588	0.9459686759575331	1.0	11.441490305682242	-7.724618006058671	24.797141137968595	1.1356772042365149	1.0180367055201358	0.17121764773269477	0.11057322384417083	284.03801699871457	191282.53650488678	0.03597994157226962	0.046448409614393386	1.885306626271557e-08	7.724618006058671	-0.11764049871637905	
SFS(ph)SQRPVDR	ddPTM_K562_Methotrexat_30min_R1	1	SFSSQRPVDR	10	1	E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;H7C5N8;Q9Y520-3	E7EPN9	PRRC2C	Protein PRRC2C	1	SFS(0.61)S(0.39)QRPVDR	96.756	0.021064	54228000.0	4989.0	4162.9	5676.4	6019.8	4148.1	4902.5	4508.7	4813.0	4834.5	5702.5	True	False	4769.6895336599255	4850.748467798659	4485.001212595763	5492.053480342442	4693.647857602746	5849.838741011102	5519.890746916133	4643.724061965632	4609.7451502191025	4669.721991645208	1.0214076003225832	1.038766007157885	0.9604428744623478	1.176098596483581	1.0051236167806874	1.2527167037946347	1.1820598221461571	0.994432660075677	0.9871562286719826	1.0	12.189120947399255	-7.246209254499811	24.6466858711015	1.0927956586724443	1.0100615520742118	0.1338642561069856	0.09001627724548977	1412.4397479332088	2285726.3948017797	0.02548729448081097	0.043927627847977435	5.67271213364858e-08	7.246209254499811	-0.08273410659823255	
SFS(ph)STLLSIFQSSPER	ddPTM_K562_Methotrexat_30min_R1	1	SFSSTLLSIFQSSPER	16	0	O60732	O60732	MAGEC1	Melanoma-associated antigen C1	1	S(0.002)FS(0.638)S(0.047)T(0.258)LLS(0.055)IFQSSPER	86.772	0.013383	49342000.0	731.33	667.2	1250.7	971.78	751.7	887.74	762.27	889.59	1263.4	1031.2	True	False	699.1816088698162	777.4434595390869	988.1951618267781	886.5855561857841	850.5617257443133	1059.2831910138082	933.228451582887	858.3026154755884	1204.664809760433	844.439687467696	0.8279828852745191	0.9206619147312732	1.1702377049451285	1.0499098625320122	1.0072498230098303	1.2544213716320989	1.1051451813941273	1.0164167177521755	1.4265847847262831	1.0	9.721850574674043	-5.412892319427814	0.6684466321540954	1.1442937382492222	4.523895622559751e-10	0.3775760772260719	0.1283851124862798	8.996698100049965	1.3247340547933226	0.05223967713352308	10.13550889723421	3.864627861814571e-06	5.412892319427814	-1.1442937377968327	
SFS(ph)TGSDLGHWVTTPPDIPGSR	ddPTM_K562_Methotrexat_30min_R1	1	SFSTGSDLGHWVTTPPDIPGSR	22	0	Q96AG3-3;Q96AG3	Q96AG3-3	SLC25A46	Solute carrier family 25 member 46	1	S(0.124)FS(0.419)T(0.124)GS(0.333)DLGHWVTTPPDIPGSR	96.045	5.4059e-05	12791000.0	1508.4	1073.2	1453.0	1710.7	1122.6	1079.9	1024.2	1368.5	1693.5	1779.6	True	False	1442.0925421071631	1250.5280587190464	1148.0351564198518	1560.7255870330944	1270.2415768532207	1288.5753914161933	1253.9029216828587	1320.3690793268163	1614.7695546377192	1457.297195323422	0.9895665391623261	0.858114640398737	0.7877838234397103	1.0709727515029754	0.8716420925872381	0.8842227896624861	0.8604304775352131	0.9060396764393573	1.1080578208889977	1.0	10.50907940948818	-9.746891899822113	24.404393713914217	1.0540288584621984	0.9006494591531462	0.37566370973533647	0.07749856062447237	154.60172616518062	259358.67946799766	0.05194149812291901	0.019427658937610087	1.7910516089585236e-10	9.746891899822113	-0.1533793993090522	
SFSASQSTDREGAS(ph)PVTEVR	ddPTM_K562_Methotrexat_30min_R1	3	SFSASQSTDREGASPVTEVR	20	1	Q9ULJ3;Q9ULJ3-2	Q9ULJ3	ZBTB21	Zinc finger and BTB domain-containing protein 21	1	S(0.001)FS(0.001)AS(0.001)QS(0.003)T(0.008)DREGAS(0.978)PVT(0.008)EVR;SFS(0.001)AS(0.003)QS(0.003)T(0.003)DREGAS(0.977)PVT(0.014)EVR;SFSASQST(0.001)DREGAS(0.99)PVT(0.008)EVR	85.777	0.0018317999999999997	86540000.0	1577.22	1720.81	2208.5	1892.33	1666.24	1740.47	1734.62	1851.5099999999998	1697.36	1903.83	True	False	1507.8872973099033	2005.144603731199	1744.9660309382257	1726.43236693186	1885.3797657366013	2076.791195016338	2123.6526908899828	1786.3913438541424	1618.4501040802356	1559.0279385101087	0.9671970976677441	1.2861505263641544	1.119265401110008	1.107377439676759	1.2093303263945174	1.3321064643658866	1.362164614522213	1.1458366458533864	1.038114881781345	1.0	10.606431066699596	-9.716789842604841	3.5633054294007582	1.0097005255968041	1.2029864371531478	0.2882461009537125	0.11031939259872914	0.2947335939388874	7.218770566927451	0.09861166667390991	0.02968867113986897	1.919597419292716e-10	9.716789842604841	0.19328591155634367	
SFSKEELMS(ph)S(ph)DLEETAGSTSIPK	ddPTM_K562_Methotrexat_30min_R1	1	SFSKEELMSSDLEETAGSTSIPK	23	1	O00567	O00567	NOP56	Nucleolar protein 56	2	S(0.002)FS(0.002)KEELMS(0.977)S(0.977)DLEET(0.038)AGS(0.003)T(0.001)SIPK	68.55199999999999	0.0045011	31653000.0	1280.9	773.17	2089.4	1322.4	786.91	809.96	738.91	842.12	848.44	1768.8	True	False	1224.5931697063543	900.9232008570677	1650.8634933404257	1206.4672451584524	890.4024579026969	966.4733068167973	904.6293769387622	812.5021622818404	808.9962095877336	1448.4531799775605	0.8454489151836622	0.6219898670601316	1.1397423928925345	0.8329349279878989	0.6147264338337061	0.6672451137369659	0.6245485801293051	0.5609447191758229	0.5585242386642187	1.0	10.500297336128618	-7.708085584911056	6.060160334568551	0.6465773219130598	0.8656253198233379	0.22939421091216472	0.16654710406422882	0.26229754306083514	20.579807009835235	0.048504150114407535	0.062152639089517195	1.9584586887966192e-08	7.708085584911056	0.21904799791027807	
SFSKEELMS(ph)SDLEETAGSTSIPK	ddPTM_K562_Methotrexat_30min_R1	2	SFSKEELMSSDLEETAGSTSIPK	23	1	O00567	O00567	NOP56	Nucleolar protein 56	1	S(0.003)FS(0.009)KEELMS(0.446)S(0.446)DLEET(0.067)AGS(0.022)T(0.006)S(0.002)IPK;SFS(0.001)KEELMS(0.499)S(0.499)DLEETAGSTSIPK	95.99600000000001	2.7232e-05	223489000.0	9946.4	5575.0	14182.8	10048.1	5822.6	5293.9	5081.7	7446.6	7485.4	11079.6	True	False	9509.16816548308	6496.173991202656	11206.02409942978	9167.198673681669	6588.373958120042	6316.871251614213	6221.400583007016	7184.6988572269365	7137.405387827093	9072.97707648088	1.0480758504430594	0.7159914476189018	1.2350989101998526	1.0103848600527199	0.7261534888254632	0.6962291647345732	0.6857066352712643	0.7918788724652717	0.7866663089372057	1.0	13.147360298342697	-7.757946293549012	24.963514139556043	0.7616858918872524	0.9985531544027447	0.35638741823105347	0.14423479328368977	93.81044129259388	670415.6021204118	0.04269129485220792	0.052908902456753906	1.7460380610508318e-08	7.757946293549012	0.23686726251549228	
SFSKEELMSS(ph)DLEETAGSTSIPK	ddPTM_K562_Methotrexat_30min_R1	3	SFSKEELMSSDLEETAGSTSIPK	23	1	O00567	O00567	NOP56	Nucleolar protein 56	1	S(0.002)FS(0.002)KEELMS(0.303)S(0.672)DLEET(0.014)AGS(0.005)T(0.002)S(0.001)IPK;SFSKEELMS(0.353)S(0.622)DLEET(0.023)AGS(0.001)T(0.001)SIPK;S(0.001)FS(0.001)KEELMS(0.183)S(0.436)DLEET(0.222)AGS(0.043)T(0.052)S(0.062)IPK	72.771	0.0015655999999999999	220964000.0	14474.8	8958.8	21405.699999999997	15758.1	8977.0	8689.599999999999	8857.5	10983.199999999999	12139.4	18947.1	True	False	13838.505123636141	10439.089426437005	16912.93609619849	14376.611839028583	10157.632848219628	10368.742218029585	10844.019848472883	10596.914630662983	11575.041943648737	15515.596588847155	0.8919093148879282	0.6728126351223117	1.090060314429402	0.9265909793866843	0.6546723994822788	0.6682786677685855	0.6989109175645704	0.6829846709394471	0.7460262244746072	1.0	13.921431550423414	-7.75489790547342	24.999843362927216	0.7201396411466248	0.8933566438288407	0.23366981011276133	0.13275437892007694	205.71134401147094	786171.6175227163	0.03890577991604745	0.04903908004863342	1.758336917566731e-08	7.75489790547342	0.17321700268221596	
SFSLASSSNS(ph)PISQR	ddPTM_K562_Methotrexat_30min_R1	4	SFSLASSSNSPISQR	15	0	Q9BXB4	Q9BXB4	OSBPL11	Oxysterol-binding protein-related protein 11	1	SFSLASSS(0.001)NS(0.998)PIS(0.001)QR;SFSLAS(0.001)S(0.138)S(0.026)NS(0.835)PISQR;SFSLASS(0.001)SNS(0.973)PIS(0.025)QR;SFSLASS(0.001)S(0.001)NS(0.998)PISQR	254.72	3.990899999999999e-76	214047000.0	7542.9	6515.5	8373.199999999999	8011.5	7207.900000000001	6263.200000000001	7260.900000000001	9874.8	9603.8	10182.8	True	False	7211.323147613443	7592.075630436032	6615.779746548314	7309.144233656181	8155.865189560245	7473.474758327534	8889.341655972534	9527.497686910076	9157.321434207106	8338.596246650563	0.8648126056601049	0.9104740661218137	0.7933925028695006	0.87654372720014	0.97808611285578	0.8962509440758054	1.0660477366970722	1.1425781276719171	1.0981850138007831	1.0	13.025588819596953	-8.778831314286876	3.7055992095409875	1.093656202023033	0.8849996347340452	0.7457291937654982	0.054270798743564254	0.11196998515945572	3.2888743814323873	0.024203714326918487	0.016675842747884466	1.6640588673061328e-09	8.778831314286876	-0.20865656728898774	
SFSS(ph)PENFQR	ddPTM_K562_Methotrexat_30min_R1	1	SFSSPENFQR	10	0	I3L521;F5GXV8;J3KPD3;G3V1T9;F5GY08;Q9Y580	I3L521;F5GY08	RBM7	RNA-binding protein 7	1	SFS(0.02)S(0.98)PENFQR	134.13	0.00055736	34283000.0	2540.7	2719.5	3386.0	2765.8	2347.4	2436.5	2421.6	3006.8	3189.5	3220.5	True	False	2429.013870148281	3168.8511514036986	2675.3248724278164	2523.326608181524	2656.1242450607956	2907.3191417590115	2964.7054434165284	2901.0491397295373	3041.2208411674073	2637.2362427169464	0.9210452331892157	1.2015803135403105	1.0144426309232084	0.9568071935724386	1.0071620441270708	1.1024113405797196	1.1241713561323634	1.1000338508698804	1.153184834906662	1.0	11.364811097779684	-8.272122408048151	22.406500010920954	1.1039756104209	1.0264412448049383	0.18530954010950096	0.07797749531938308	310.89887706669913	652072.6799435402	0.027119218359476595	0.02421628548302647	5.344137110193128e-09	8.272122408048151	-0.07753436561596172	
SFSTGSDLGHWVT(ph)TPPDIPGSR	ddPTM_K562_Methotrexat_30min_R1	1	SFSTGSDLGHWVTTPPDIPGSR	22	0	Q96AG3-3;Q96AG3	Q96AG3-3	SLC25A46	Solute carrier family 25 member 46	1	SFSTGSDLGHWVT(0.889)T(0.11)PPDIPGS(0.001)R	121.35	3.2232999999999997e-06	7015200.0	1082.1	1360.7	1554.3	1534.7	1292.0	1045.3	1186.5	1577.7	1043.7	1421.6	True	False	1034.5321796699557	1585.5325470546104	1228.07367076626	1400.1552337754651	1461.9206460844111	1247.2894311022746	1452.6028281358242	1522.2113967511264	995.1786148068428	1164.1344644143496	0.8886706916545126	1.361984028066944	1.0549242448414897	1.202743563201569	1.2558005030972699	1.0714307231937836	1.2477964294842836	1.3075906978812086	0.8548656922613276	1.0	10.185041992341072	-9.769323378478399	24.99980551926546	0.9274327676855357	1.178916741245295	0.34634956448675536	0.1352760524394215	198.8240853784415	630436.3799101021	0.11295240660100363	0.03128287237039326	1.7008915419215128e-10	9.769323378478399	0.25148397355975927	
SFTPDHVVY(ph)AR	ddPTM_K562_Methotrexat_30min_R1	3	SFTPDHVVYAR	11	0	Q6NZI2-3;Q6NZI2-2;Q6NZI2	Q6NZI2-3	PTRF	Polymerase I and transcript release factor	1	SFTPDHVVY(1)AR;SFTPDHVVY(1)AR;SFTPDHVVY(1)AR	93.258	0.013569	33216300.0	7723.199999999999	6971.0	13647.199999999999	10367.4	8127.8	7617.6	7637.2	8175.9	8582.6	8781.7	True	False	7383.697375498567	8122.839263259852	10782.839220022703	9458.506138426896	9196.748163502227	9089.593389806463	9350.036509935884	7888.3489628557645	8183.596799311296	7191.249033587148	1.0267614625793904	1.1295449824253974	1.4994389944863296	1.3152800152310664	1.2788805005289454	1.2639797825597454	1.300196456313221	1.0969372533217485	1.137993797890927	1.0	12.81202665589166	-9.628810351610532	1.389309571164612	1.0222272804541364	1.2673538923720729	0.3145084084372942	0.1206954201653203	0.5175676065189048	1.856887532859491	0.11873121797830907	0.03821310316795745	2.350659086220287e-10	9.628810351610532	0.2451266119179365	
SFTQSSPT(ph)FPLASVGTTFAQR	ddPTM_K562_Methotrexat_30min_R1	1	SFTQSSPTFPLASVGTTFAQR	21	0	Q5T481	Q5T481	RBM20	RNA-binding protein 20	1	S(0.001)FT(0.15)QS(0.193)S(0.088)PT(0.561)FPLAS(0.002)VGT(0.004)T(0.001)FAQR	99.48100000000001	0.00023757	3458100.0	1240.4	749.19	795.81	1247.9	808.62	932.11	825.3	1330.4	1425.3	1385.9	True	False	1185.873501213023	872.9809134473747	628.7803563871175	1138.4985444897407	914.9677034340377	1112.227065555096	1010.3945335528832	1283.609077922102	1359.0381140981044	1134.9000803544227	1.0449144570001982	0.769213896940379	0.5540402783219057	1.0031707321178391	0.8062099203907878	0.9800220167468434	0.8902938250188006	1.1310326786841343	1.197495830358638	1.0	10.148349569030428	-8.888169242530163	1.1671160141771797	1.1242457130630026	0.8227823931223811	0.37825423915825396	0.1413707016902633	0.5002772871566253	1.3210557815206192	0.10384286174462887	0.052838604433612046	1.293691597635392e-09	8.888169242530163	-0.3014633199406215	
SGAMS(ph)PMSWNSDASTSEAS	ddPTM_K562_Methotrexat_30min_R1	1	SGAMSPMSWNSDASTSEAS	19	0	Q13158	Q13158	FADD	FAS-associated death domain protein	1	S(0.011)GAMS(0.977)PMS(0.009)WNSDASTSEAS(0.002)	69.188	0.011746	0.0	649.42	646.27	878.69	832.65	634.17	693.36	594.64	747.26	819.95	1074.4	True	False	620.8722743935517	753.0551327882579	694.2649770093316	759.6528672725229	717.574470686804	827.3420070305881	728.003156951274	720.9784422490004	781.8307034692639	879.8157488511371	0.7056844290458387	0.8559236792153322	0.7891026932808403	0.8634226748776402	0.8155963014117585	0.9403582603640942	0.8274495630498774	0.8194652609827157	0.8886300392896785	1.0	9.781057615739835	-15.961373627568255	0.023305585793551256	2.120157960309488	2.488698957128771e-07	0.5747787526323849	0.050312002275849636	1871.9096186230609	3.309564165451492	212.66472374038796	105.63398216255113	1.0930156301903207e-16	15.961373627568255	-2.1201577114395924	
SGAQASS(ph)TPLS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	1	SGAQASSTPLSPTR	14	0	P02545-3;P02545;P02545-6;Q3BDU5;P02545-2	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	2	SGAQAS(0.091)S(0.537)T(0.372)PLS(0.808)PT(0.192)R	138.01	4.0154e-05	16446000.0	3334.8	2567.9	3168.8	2993.2	2232.5	2331.6	2474.7	2778.1	2681.9	3385.2	True	False	3188.206184976773	2992.2018281631003	2503.7121842141946	2730.790803242798	2526.1128811017397	2782.1487013853116	3029.7144701118614	2680.392648357929	2557.219054374314	2772.107476741317	1.1501019393103007	1.0793960383096366	0.9031800553264884	0.9850955730089197	0.9112608015008313	1.0036222349704127	1.0929282127521867	0.9669151253503341	0.9224819296618291	1.0	11.43676747761912	-6.568492830525972	5.629840178289132	0.9758006437966077	1.1345325597945897	0.5509120939250249	0.052781869911633306	0.1260385813647853	9.270749235572612	0.01426917829330589	0.04064687665827415	2.7008916951518816e-07	6.568492830525972	0.15873191599798198	
SGAQASST(ph)PLS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	2	SGAQASSTPLSPTR	14	0	P02545-3;P02545;P02545-6;Q3BDU5;P02545-2	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	2	SGAQAS(0.001)S(0.393)T(0.606)PLS(0.999)PT(0.001)R;SGAQAS(0.017)S(0.162)T(0.821)PLS(0.964)PT(0.036)R	156.6	6.528100000000001e-07	27067100.0	7387.200000000001	6728.5	7868.0	8140.7	6411.4	6099.1	5667.4	7230.5	7340.0	8657.3	True	False	7062.467533183525	7840.270260055073	6216.614322581825	7427.017470252127	7254.611478564701	7277.6647557982305	6938.458717384722	6976.199216713584	6998.765002090851	7089.3790790477915	0.9962039629191501	1.1059177641137137	0.8768912274637186	1.0476259468480398	1.0233070340398702	1.0265588388843396	0.9787117658711318	0.984035292643794	0.9872183337995363	1.0	12.791443559685899	-8.769720353293499	24.935775995533938	0.9861609533242341	1.012875286524669	0.04963442613976776	0.05402112241066839	632.8114544277183	1905503.5390530508	0.02187949090941253	0.015041682822155802	1.699337521244402e-09	8.769720353293499	0.026714333200434925	
SGAQASSTPLS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	2	SGAQASSTPLSPTR	14	0	P02545-3;P02545;P02545-6;Q3BDU5;P02545-2	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	1	SGAQASS(0.001)T(0.003)PLS(0.976)PT(0.02)R;SGAQASSTPLS(0.819)PT(0.181)R	135.61	6.2271e-05	47628000.0	3523.4	2513.8	3831.3	3089.3999999999996	2760.3999999999996	2629.2	2645.5	2900.7	3011.2	3806.8999999999996	True	False	3368.515554800037	2929.1627227058725	3027.1624878123707	2818.557098602934	3123.4409840955195	3137.255689518896	3238.820717937907	2798.680736867589	2871.209969250133	3117.433520384767	1.0805412634378426	0.9396071170570922	0.9710431571412453	0.9041274112735709	1.0019270543129373	1.0063584897655435	1.0389381832072422	0.8977515377848905	0.9210172247380455	1.0	11.60614307941347	-9.27353148503407	24.762091976268568	0.9320382908669296	0.9865650499334944	0.16382294335756875	0.052306814876711995	1223.3078187993667	2505061.4562570695	0.028423697539408033	0.013815531939591362	5.326826050481967e-10	9.27353148503407	0.05452675906656479	
SGAQASSTPLSPT(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	SGAQASSTPLSPTR	14	0	P02545-3;P02545;P02545-6;Q3BDU5;P02545-2	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	1	SGAQASSTPLS(0.164)PT(0.835)R;SGAQASSTPLS(0.232)PT(0.767)R	162.26	1.4074000000000001e-05	249930000.0	5256.9	4375.4	6460.200000000001	5884.3	4533.9	4595.0	4098.4	4714.7	4980.6	5460.2	True	False	5025.812970434331	5098.36048091625	5104.292303856524	5368.432554965121	5130.187319877796	5482.918717990007	5017.5705274604825	4548.8813286826025	4749.0529931081355	4471.30486958021	1.12401482722116	1.1402399589440009	1.141566601414889	1.2006411353178739	1.1473579792736086	1.2262457778918514	1.1221714183697697	1.01734984783305	1.0621179122491824	1.0	12.126480202011312	-9.132214955059034	4.022949433483212	1.0301738392332909	1.1630450732918423	0.779278360333432	0.03244383827116028	0.10956575776023232	3.0082532236174413	0.016416609900641307	0.009074499143494183	7.375390930926139e-10	9.132214955059034	0.1328712340585514	
SGAVQGAGSLGPGS(ph)PVR	ddPTM_K562_Methotrexat_30min_R1	3	SGAVQGAGSLGPGSPVR	17	0	Q9P270	Q9P270	SLAIN2	SLAIN motif-containing protein 2	1	SGAVQGAGSLGPGS(1)PVR;SGAVQGAGSLGPGS(1)PVR;SGAVQGAGSLGPGS(1)PVR	166.3	1.6099999999999997e-42	27091000.0	3184.8	2767.73	4242.07	2889.89	2754.05	3113.76	2541.04	3030.31	3118.37	3507.38	True	False	3044.8000053718447	3225.0503391338707	3351.717478316556	2636.537830543676	3116.2558477931707	3715.4500516493054	3110.93290384008	2923.7322797039415	2973.397659341969	2872.1594947929098	1.060108260314904	1.1228660333734026	1.1669677413086086	0.9179635863967845	1.0849870466604645	1.2936085403283633	1.0831337568404733	1.0179561006289974	1.0352480998122142	1.0	11.487920150799972	-9.189863750365996	4.995547056862045	1.0199164625615469	1.1076320638085753	0.16976658446524695	0.08831239629467116	0.42689261168613696	20.078866156453575	0.04613268857463661	0.025701962176445874	6.458568195735344e-10	9.189863750365996	0.08771560124702837	
SGCSEAQPPES(ph)PETR	ddPTM_K562_Methotrexat_30min_R1	2	SGCSEAQPPESPETR	15	0	A0A494BZT8;Q9Y6A5;H0Y8F2;A0A494C117	A0A494BZT8	TACC3	Transforming acidic coiled-coil-containing protein 3	1	SGCSEAQPPES(0.5)PET(0.5)R;SGCSEAQPPES(0.683)PET(0.317)R	144.08	1.1677e-08	113733000.0	2893.3	2820.0	3682.8	3732.4	2810.8	2723.1	2711.2	3317.2	3385.6	3411.3999999999996	True	False	2766.1139963396013	3285.9570681957803	2909.830608439798	3405.1862869248375	3180.4694675031465	3249.30053557314	3319.255615374504	3200.532195793143	3228.2041949698605	2793.562402858127	0.9901744072405747	1.1762604854768515	1.0416200495334258	1.2189404766619678	1.1384995245673304	1.1631386978321094	1.1881802289358327	1.145681296583402	1.1555869278835678	1.0	11.447890332370681	-5.582518575956205	1.937832312029949	1.1442048235806548	5.19170953103882e-13	0.29982576475500544	0.06432618410397527	13.11645408590623	7.133682819609666	0.015910107226113985	51.42421970956813	2.6150585925772715e-06	5.582518575956205	-1.1442048235801356	
SGELGLPGAPESSTASAPGEPSPPS(ph)PPCRRPGPDCR	ddPTM_K562_Methotrexat_30min_R1	1	SGELGLPGAPESSTASAPGEPSPPSPPCRRPGPDCR	36	2	Q5QP82;Q5QP82-2	Q5QP82	DCAF10	DDB1- and CUL4-associated factor 10	1	SGELGLPGAPESSTAS(0.001)APGEPS(0.18)PPS(0.819)PPCRRPGPDCR	77.149	1.4389e-08	60275000.0	1950.5	1770.4	2641.2	2277.9	1619.3	1424.3	1697.8	1864.6	1933.3	2341.2	True	False	1864.7583554627565	2062.928508345323	2086.848214133593	2078.200043667906	1832.2663329756097	1699.5258171998184	2078.574868612729	1799.0209611346586	1843.4213049785067	1917.1859933081548	0.9726538593394723	1.0760189754910974	1.088495441453065	1.083984574747449	0.9557060918299252	0.8864689305742538	1.0841800826147772	0.9383653789533485	0.961524500707224	1.0	10.904774589642575	-7.76578309846683	24.998169377148105	0.9693874584658646	1.0591409309073605	0.3503561771795273	0.056075943962785334	120.34700396380022	692598.9595885349	0.017286131991763553	0.020279110247293685	1.7148135302641036e-08	7.76578309846683	0.0897534724414959	
SGFARPGDVEFEDFSQPMNRAPS(ph)DSSLGTPSDGRPELR	ddPTM_K562_Methotrexat_30min_R1	2	SGFARPGDVEFEDFSQPMNRAPSDSSLGTPSDGRPELR	38	3	M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;Q15642;M0R2H7;Q15642-5	M0R0F9	TRIP10	Cdc42-interacting protein 4	1	SGFARPGDVEFEDFS(0.169)QPMNRAPS(0.678)DS(0.036)S(0.036)LGT(0.036)PS(0.045)DGRPELR;S(0.003)GFARPGDVEFEDFS(0.176)QPMNRAPS(0.657)DS(0.041)S(0.041)LGT(0.041)PS(0.041)DGRPELR	47.784	0.0013387	63415000.0	1405.62	1403.6	1939.1799999999998	1647.48	1424.53	1412.3	1150.83	1199.85	1251.74	1691.35	True	False	1343.8306278418647	1635.5210428792898	1532.1726184626618	1503.047986277711	1611.8806640608568	1685.2069870331427	1408.932922632576	1157.6505954185454	1193.5468806154229	1385.030125483406	0.9702537173137936	1.18085593431295	1.106237756328874	1.085209598421633	1.1637874400011876	1.2167294819273107	1.0172579619095488	0.8358306249941675	0.8617479567087747	1.0	10.435701641018028	-9.025907321043011	4.9038556075458715	0.8906844149396694	1.1232050044813886	0.641307045632977	0.07411138730578895	0.11381675250812406	7.183114039605406	0.03412846095442898	0.02034873968832721	9.420906183270703e-10	9.025907321043011	0.23252058954171917	
SGFGEISS(ph)PVIR	ddPTM_K562_Methotrexat_30min_R1	4	SGFGEISSPVIR	12	0	G3V1T4;P57740	G3V1T4	NUP107	Nuclear pore complex protein Nup107	1	SGFGEIS(0.065)S(0.935)PVIR;SGFGEIS(0.03)S(0.97)PVIR;SGFGEIS(0.025)S(0.975)PVIR;SGFGEIS(0.028)S(0.972)PVIR	181.31	2.279e-07	296231000.0	17716.399999999998	16075.3	21843.1	19421.7	16291.7	14613.900000000001	14836.3	16224.099999999999	16278.6	19274.7	True	False	16937.60826901838	18731.470091619736	17258.531813623158	17719.02971513452	18434.34410976271	17437.829347733234	18163.717942748877	15653.489207092578	15521.811439105742	15783.86505433825	1.0730963683931787	1.1867479877161853	1.09342874854848	1.1226039790719309	1.167923322095051	1.1047882941029317	1.1507775744545228	0.9917399289212855	0.9833973735627902	1.0	13.946162906317246	-9.26705571036852	24.77107506658559	0.9906764710937698	1.1297535071323448	0.7891405177857631	0.03239175781618105	166.84122530861666	735854.2465746986	0.015905691947363906	0.007989412984771403	5.406849605849639e-10	9.26705571036852	0.13907703603857502	
SGGGLHSVAEGVRLS(ph)PEPGR	ddPTM_K562_Methotrexat_30min_R1	1	SGGGLHSVAEGVRLSPEPGR	20	1	Q9NWK9-2;Q9NWK9	Q9NWK9-2	ZNHIT6	Box C/D snoRNA protein 1	1	SGGGLHSVAEGVRLS(1)PEPGR	71.042	0.0082971	335340000.0	2692.3	1944.5	2801.3	2287.5	2217.9	1908.5	2470.6	2280.5	2526.3	2599.6	True	False	2573.949715668995	2265.7955741513106	2213.345412029546	2086.9584265728677	2509.5927251939775	2277.29061442523	3024.694940743673	2200.2935224002963	2408.852864411732	2128.7872493609602	1.2091155264302094	1.0643598014933051	1.0397212838877954	0.9803508674713036	1.1788837639587193	1.0697596084854648	1.4208535595333236	1.0335901453096366	1.1315611107379775	1.0	11.055816058957292	-7.796979691849313	24.99674589873416	1.1514074123283353	1.0703371514977595	0.060793569948233706	0.12064476652253765	445.73058180116965	313495.40773154044	0.03715725707412506	0.042133858017157515	1.5959537742774e-08	7.796979691849313	-0.08107026083057578	
SGGGLHSVAEGVRLS(ph)PEPGREGVR	ddPTM_K562_Methotrexat_30min_R1	2	SGGGLHSVAEGVRLSPEPGREGVR	24	2	Q9NWK9-2;Q9NWK9	Q9NWK9-2	ZNHIT6	Box C/D snoRNA protein 1	1	SGGGLHS(0.043)VAEGVRLS(0.956)PEPGREGVR;SGGGLHS(0.002)VAEGVRLS(0.998)PEPGREGVR	69.07	0.0093264	128197000.0	2085.1	1830.5900000000001	2353.8999999999996	2152.4	1566.3	1736.65	1789.25	1780.46	2004.56	2121.94	True	False	1993.4415006282454	2133.063882790254	1859.8485579467913	1963.7024338165847	1772.2959039953678	2072.233034079946	2190.5348590324697	1717.8402126256647	1911.368443132321	1737.6361039809956	1.1472145957724917	1.227566507108892	1.0703325936229122	1.1300999267439609	1.0199465238636358	1.1925586889754276	1.2606407371565684	0.9886075736398561	1.0999820035698484	1.0	10.762910269029575	-9.287013152459409	24.996114805263314	1.0332210876475325	1.1455993607467279	0.37004467293722976	0.07169791742885759	959.5051597011682	937825.4106206469	0.04034590605385808	0.019394553296437526	5.164007300162896e-10	9.287013152459409	0.11237827309919535	
SGGIVIS(ph)PFRLEELTNR	ddPTM_K562_Methotrexat_30min_R1	1	SGGIVISPFRLEELTNR	17	1	Q16204	Q16204	CCDC6	Coiled-coil domain-containing protein 6	1	S(0.004)GGIVIS(0.995)PFRLEELTNR	69.986	0.024718	133040000.0	1485.4	1090.7	1384.3	1411.3	1213.7	1491.0	1112.1	1384.7	1508.3	1704.5	True	False	1420.1035945677393	1270.9196362699074	1093.7543475788034	1287.5735201846067	1373.3228236475622	1779.1146482095983	1361.5167342350194	1335.9993161445686	1438.179462214392	1395.7985330573013	1.0174130155139232	0.9105322911366985	0.7836047407093111	0.9224637293208477	0.9838975977711417	1.2746213769924923	0.9754392929850755	0.9571577018484532	1.0303632137112664	1.0	10.446875005339702	-7.864250171212016	4.080235978679988	1.0480549648222355	0.8994371690973032	0.30193546168823726	0.09818312015065828	0.2798156956569085	8.54863326914007	0.032812724638132985	0.03799555750171308	1.3669411852726658e-08	7.864250171212016	-0.14861779572493228	
SGGLQT(ph)PECLS(ph)REGSPIPHDPEFGSK	ddPTM_K562_Methotrexat_30min_R1	1	SGGLQTPECLSREGSPIPHDPEFGSK	26	1	P85037-2;P85037	P85037-2	FOXK1	Forkhead box protein K1	2	S(0.101)GGLQT(0.604)PECLS(0.815)REGS(0.481)PIPHDPEFGSK	55.051	0.0070978000000000005	24329000.0	2890.3	1990.0	4193.9	3706.0	2306.5	2202.0	2064.5	2663.0	2311.8	3596.9	True	False	2763.2458727475014	2318.813675783548	3313.6577030345593	3381.100733936194	2609.8451781684935	2627.505335585201	2527.5166782017777	2569.3407805972306	2204.3249225931368	2945.466555326374	0.9381352056945418	0.7872483466466014	1.1250026577427519	1.1478998896871024	0.8860549353205296	0.8920506433297658	0.8581040153490098	0.8723034983884016	0.7483788667051714	1.0	11.524280456491782	-7.968726379514768	24.999869631134214	0.8678345827941845	0.9963165768135835	0.23429795249143937	0.10911949565837972	310.3939078340104	248125.1754584684	0.035903599871071744	0.04071051887940777	1.0746662758717009e-08	7.968726379514768	0.12848199401939908	
SGGLQT(ph)PECLSR	ddPTM_K562_Methotrexat_30min_R1	3	SGGLQTPECLSR	12	0	P85037-2;P85037	P85037-2	FOXK1	Forkhead box protein K1	1	SGGLQT(1)PECLSR;SGGLQT(0.732)PECLS(0.268)R;S(0.065)GGLQT(0.933)PECLS(0.002)R	130.61	0.00039099	62434000.0	5715.4	5799.4	9244.8	6491.099999999999	6623.1	6530.9	5411.1	6474.7	6365.0	7539.3	True	False	5464.157859426729	6757.652277054825	7304.442817667063	5922.035341082898	7494.153739227294	7792.903994629144	6624.676918100098	6246.981131105104	6069.092539279059	6173.859712689294	0.8850472984016958	1.0945587673729689	1.183124197437472	0.9592111931068317	1.2138522881924845	1.2622418320604512	1.0730203189561027	1.0118437123320962	0.9830305225117273	1.0	12.591956985932764	-9.220273232464969	3.9731584935381883	0.9960452162391197	1.1061695463304133	0.1502820445162505	0.10641565100560144	0.42541539167161824	14.594834926568769	0.05862019731266233	0.030501496601283845	6.021806103604384e-10	9.220273232464969	0.11012433009129363	
SGGLQTPECLS(ph)REGS(ph)PIPHDPEFGSK	ddPTM_K562_Methotrexat_30min_R1	1	SGGLQTPECLSREGSPIPHDPEFGSK	26	1	P85037-2;P85037	P85037-2	FOXK1	Forkhead box protein K1	2	S(0.009)GGLQT(0.125)PECLS(0.901)REGS(0.964)PIPHDPEFGS(0.002)K	57.02	0.0077866	32962000.0	3892.4	2983.1	5621.8	4161.6	2962.3	2588.3	2669.1	3412.1	3771.8	4609.9	True	False	3721.294756628161	3476.0065709697997	4441.861006442615	3796.7589893008258	3351.8943729844073	3088.4523433674735	3267.713618691386	3292.094509003311	3596.4498412651596	3775.0024391556735	0.9857728085231318	0.9207958476835454	1.1766511619621873	1.0057633208178849	0.8879184654868992	0.8181325424675076	0.865618942334313	0.8720774521511645	0.9527013291333265	1.0	11.882261861273753	-7.728991041959957	5.2615849209361665	0.8868720092366522	1.0278742958279377	0.3793342107879938	0.07619282376136037	0.18360897321348435	12.81113465414956	0.023387698143342912	0.02950209885949663	1.8664181883913585e-08	7.728991041959957	0.14100228659128544	
SGGSGHAVAEPAS(ph)PEQELDQNKGK	ddPTM_K562_Methotrexat_30min_R1	2	SGGSGHAVAEPASPEQELDQNKGK	24	1	P46013	P46013	MKI67	Antigen KI-67	1	SGGSGHAVAEPAS(1)PEQELDQNKGK;SGGSGHAVAEPAS(1)PEQELDQNKGK	92.098	7.1925e-05	37457000.0	4107.9	2472.8	6578.8	4642.9	2184.7	2291.5	2122.9	3103.1000000000004	2974.3	5706.700000000001	True	False	3927.321634660574	2881.3881695867126	5197.999784621417	4235.864165567281	2472.026343266728	2734.2999439116643	2599.014364812087	2993.9622141461755	2836.025442196023	4673.161330946379	0.8403993263945881	0.6165822160912198	1.112309080835596	0.9064236959928496	0.5289837367472414	0.585107114921267	0.5561576373580389	0.6406716999731437	0.6068751411203022	1.0	12.190183128699513	-7.752640625832301	24.89394813797395	0.6267661186661138	0.8682882048152384	0.2770717221314065	0.16772275835082645	216.88564329557872	613622.2962244768	0.048850582903342064	0.06208790701030368	1.767499803422707e-08	7.752640625832301	0.24152208614912463	
SGHSDSNGFAGHINLPDLVQQSHS(ph)PAGTPTEGLGR	ddPTM_K562_Methotrexat_30min_R1	2	SGHSDSNGFAGHINLPDLVQQSHSPAGTPTEGLGR	35	0	Q9UKE5-8;Q9UKE5-5;Q9UKE5-7;Q9UKE5-3;Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5	Q9UKE5-8	TNIK	TRAF2 and NCK-interacting protein kinase	1	SGHSDSNGFAGHINLPDLVQQS(0.268)HS(0.624)PAGT(0.08)PT(0.028)EGLGR;SGHSDSNGFAGHINLPDLVQQS(0.09)HS(0.79)PAGT(0.09)PT(0.031)EGLGR	120.44	2.5808999999999998e-28	28486900.0	2033.74	2161.17	2489.8900000000003	2712.13	2079.39	2079.83	2064.3	2436.6000000000004	2443.05	2781.0299999999997	True	False	1944.339224731518	2518.2666088910214	1967.2961153600984	2474.361773753472	2352.866232400516	2481.7277121299567	2527.2718231106473	2350.903396921973	2329.473138740879	2277.3585182683164	0.8537694917750485	1.1057839987381035	0.8638499821521353	1.0865051567001207	1.0331558309886204	1.0897395786487938	1.1097382352570304	1.0322939396953537	1.0228838015861421	1.0	11.1531457135158	-7.288336253820651	24.994196995999708	1.057828221498178	0.9575994112371623	0.32998855002881256	0.07203442344194622	855.0660479310567	794576.553245388	0.01906511559497301	0.02828668315317773	5.1482988163165784e-08	7.288336253820651	-0.10022881026101571	
SGISTNHADYSSSPAGSPGAQVSLYNSPSVAS(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	1	SGISTNHADYSSSPAGSPGAQVSLYNSPSVASPAR	35	0	Q8WV41	Q8WV41	SNX33	Sorting nexin-33	1	SGISTNHADYSSSPAGSPGAQVSLY(0.005)NS(0.078)PS(0.131)VAS(0.785)PAR	175.35	6.4633e-58	9067300.0	621.46	384.9	671.8	565.31	488.66	593.2	555.92	492.81	667.79	650.65	True	False	594.1413625151928	448.49818281863685	530.7983606901969	515.7501500003964	552.9273551978393	707.8275045727255	680.5992113082748	475.4775929726327	636.7445886575272	532.8109800725919	1.115107204499136	0.8417585214882998	0.9962226390640059	0.9679795824217604	1.0377551812511574	1.3284776985569795	1.2773745976772997	0.8923945090393072	1.1950665667039653	1.0	9.057480003289479	-8.010336720604979	22.928967469021252	1.1453301219154972	0.9754323971699584	0.24184747135202078	0.13282142011667794	235.37919492551532	522123.07824067865	0.04311116518484928	0.04597197683679093	9.764798353757228e-09	8.010336720604979	-0.16989772474553877	
SGLLNSTS(ph)DSDLVR	ddPTM_K562_Methotrexat_30min_R1	4	SGLLNSTSDSDLVR	14	0	Q12809-7;Q12809-4;Q12809;Q86U57;Q12809-5	Q12809-7	KCNH2	Potassium voltage-gated channel subfamily H member 2	1	SGLLNS(0.029)T(0.029)S(0.943)DSDLVR;SGLLNS(0.003)T(0.01)S(0.983)DS(0.004)DLVR;SGLLNS(0.017)T(0.081)S(0.886)DS(0.016)DLVR;SGLLNS(0.059)T(0.289)S(0.653)DSDLVR	180.56	1.27e-05	164264000.0	10509.900000000001	8371.3	10317.7	10670.9	8590.3	7986.9	8450.1	10073.699999999999	9532.8	10397.0	True	False	10047.897380198936	9754.515037229556	8152.155769713078	9735.398764641051	9720.075020169448	9530.255388185939	10345.250027838629	9719.402261172489	9089.622208710038	8514.002551010122	1.180161424664693	1.145702620922078	0.9574998035143748	1.1434573464493525	1.1416575179456852	1.1193625243928598	1.2150865548673395	1.1415784999993164	1.0676085841237648	1.0	13.055621807049631	-10.004379367007429	3.6500980691483167	1.0003973958357915	1.1282262368101403	0.2977924317931909	0.06359012974667946	0.27175615184557483	9.529666007406206	0.0643080043221669	0.01698952183796028	9.899668065152718e-11	10.004379367007429	0.12782884097434888	
SGLS(ph)LEELR	ddPTM_K562_Methotrexat_30min_R1	1	SGLSLEELR	9	0	A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4	A0A087WWA3	KIF1B;KIF1Bbeta	Kinesin-like protein;Kinesin-like protein KIF1B	1	S(0.084)GLS(0.916)LEELR	79.65899999999999	0.032963	5025700.0	1395.0	1059.5	1672.9	1549.2	1296.1	1184.3	1488.9	1624.6	1523.0	1757.4	True	False	1333.677470325837	1234.5643665792306	1321.781151531156	1413.3840412881686	1466.5598679489203	1413.1492138662818	1822.8237259261944	1567.461897167955	1452.1960624229384	1439.11783044582	0.926732642811243	0.8578619071078973	0.9184662461736615	0.9821183584740387	1.0190686522830443	0.9819551839118738	1.2666257670933778	1.0891824588695254	1.0090876728092981	1.0	10.490969004912916	-7.7405425943354045	1.1806001889176856	1.0890380237925827	0.8912368001256262	0.47661397349579104	0.0765947631419247	0.3942838024107807	1.1600041568122248	0.032595894150315434	0.0489210141099377	1.8174287992412713e-08	7.7405425943354045	-0.19780122366695652	
SGLSCQVGSATSHPVSCQEPIDEDQRIS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	SGLSCQVGSATSHPVSCQEPIDEDQRISPK	30	1	Q8TEP8;K7ELX0;H0Y966;A0A0A0MR42;K7ENP4;Q8TEP8-1;Q8TEP8-2	Q8TEP8	CEP192	Centrosomal protein of 192 kDa	1	SGLSCQVGSATSHPVS(0.004)CQEPIDEDQRIS(0.996)PK	64.035	0.00027913	10359000.0	1205.9	653.32	1376.8	842.38	631.95	749.33	901.11	810.71	826.79	1126.8	True	False	1152.890079903889	761.2700254587477	1087.8284950852383	768.5298532793233	715.0625017748017	894.1274173996628	1103.2068558461638	782.1968697851975	788.3527133622198	922.7256010847559	1.2494397885444513	0.8250231971062675	1.1789295688841703	0.832891005057018	0.7749459871213874	0.9690068383802584	1.1955958028575713	0.8477025768718751	0.8543739465291009	1.0	9.849757874687324	-6.246468375473134	24.118061589372637	0.944827457708566	1.2494401459658684	0.30384752042918006	0.13952593074099398	2217.062385148499	3571559.7144053834	0.03521577214362792	0.7567400291706113	5.669328530296955e-07	6.246468375473134	0.30461268825730237	
SGLTVPT(ph)SPK	ddPTM_K562_Methotrexat_30min_R1	1	SGLTVPTSPK	10	0	Q5VZS7;Q53EL6-2;Q53EL6	Q5VZS7	PDCD4	Programmed cell death protein 4	1	SGLTVPT(0.928)S(0.072)PK	118.23	0.0087721	14640000.0	10880.0	8315.6	15709.0	10694.0	8111.8	7699.2	6621.4	9512.3	9988.2	12331.0	True	False	10401.728227344163	9689.611558967674	12411.895576186822	9756.473623506108	9178.64388305537	9186.96143493986	8106.417502080525	9177.74701737703	9523.850762109516	10097.736410166954	1.0301049467751142	0.95958254061887	1.22917603233234	0.9662040310027064	0.9089803407636794	0.9098040453591089	0.8027955150342942	0.908891522275861	0.9431669014968921	1.0	13.30174430264248	-7.511618006764837	19.693523685781678	0.9053446409612551	1.0676295347074827	0.460197826129364	0.0775446240154254	28.17621734306759	49275.83710115256	0.022352270551753557	0.03104535824783605	3.078803653404707e-08	7.511618006764837	0.16228489374622757	
SGLTVPTS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	SGLTVPTSPK	10	0	Q5VZS7;Q53EL6-2;Q53EL6	Q5VZS7	PDCD4	Programmed cell death protein 4	1	SGLTVPT(0.148)S(0.852)PK	93.561	0.011715	26700000.0	8009.3	5948.2	11617.0	8701.7	6502.1	5322.8	4922.4	6631.0	7395.0	8472.9	True	False	7657.220762065036	6931.0389478872885	9178.750455698155	7938.83547126081	7357.240118347873	6351.355767598959	6026.373502921017	6397.783971513423	7051.208064095618	6938.375705920331	1.1036042276481703	0.9989425827680704	1.3228961423732317	1.1441922155479147	1.0603692319616156	0.9153951928805926	0.8685568147857535	0.9220867019429871	1.0162620709741923	1.0	12.760382247856672	-8.052797324311138	3.170312110131457	0.93541591785459	1.1435770147217703	0.5511923093694482	0.08415333142674461	0.19828240139554718	3.9684043165300995	0.030200745719272067	0.03166708100855138	8.855287702299416e-09	8.052797324311138	0.20816109686718032	
SGMS(ph)HEEDQLIPNLYR	ddPTM_K562_Methotrexat_30min_R1	1	SGMSHEEDQLIPNLYR	16	0	Q6P2Q9	Q6P2Q9	PRPF8	Pre-mRNA-processing-splicing factor 8	1	S(0.002)GMS(0.998)HEEDQLIPNLYR	71.531	0.031671	11050000.0	861.45	852.31	1130.8	1176.3	879.0	941.48	805.22	1090.3	1161.0	972.36	True	False	823.5816894711047	993.1397407070731	893.4605332963307	1073.1756053235683	994.6039070496892	1123.407685443576	985.8110824033107	1051.9535310120766	1107.025363409738	796.2561816389542	1.0343174828180368	1.2472615768745035	1.1220767309552289	1.3477767960490101	1.249100390030845	1.410862121197273	1.2380576818558455	1.321124476354851	1.3902879361402505	1.0	9.63708885737631	-5.1585190087270405	0.7515446870555076	1.291850505113584	9.397945586257643e-09	0.24160587656336263	0.11805662164731356	15.369823379152551	1.8882871779044912	0.041378536871936496	24.49944668043197	6.941942167156527e-06	5.1585190087270405	-1.2918504957156385	
SGNFGGS(ph)RNMGGPYGGGNYGPGGSGGSGGYGGR	ddPTM_K562_Methotrexat_30min_R1	1	SGNFGGSRNMGGPYGGGNYGPGGSGGSGGYGGR	33	1	P22626;P22626-2	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	1	S(0.016)GNFGGS(0.981)RNMGGPY(0.003)GGGNYGPGGSGGSGGYGGR	107.71	2.2531e-14	6457600.0	1086.2	686.22	1721.4	1596.6	1009.9	1044.5	1061.2	1103.8	1180.6	1720.9	True	False	1038.4519485791561	799.606191254365	1360.1016643228713	1456.6285568814158	1142.719551455609	1246.3348424244964	1299.2011135421308	1064.9787283602047	1125.7141636878007	1409.2283341380512	0.7368940315937665	0.5674071205383766	0.965139311618207	1.0336355873601966	0.8108831789523653	0.88440944042387	0.9219237806035044	0.7557176523927861	0.7988160161258319	1.0	10.46068967192346	-6.76283373581646	24.99999996861516	0.8899337407861105	0.6521505520477344	0.5238551001057435	0.09295318124028298	27.89850965118657	500247.3467658656	0.02500949738937253	0.057056145527390335	1.7264987338236877e-07	6.76283373581646	-0.23778318873837612	
SGPKPFSAPKPQT(ph)SPSPKR	ddPTM_K562_Methotrexat_30min_R1	1	SGPKPFSAPKPQTSPSPKR	19	3	Q01518-2;Q01518	Q01518-2	CAP1	Adenylyl cyclase-associated protein 1	1	SGPKPFSAPKPQT(0.467)S(0.467)PS(0.065)PKR	58.163999999999994	0.027668	14716000.0	2264.7	1133.3	4179.0	2542.2	1217.1	968.17	930.99	1592.6	1440.6	3040.5	True	False	2165.146499675213	1320.5585621937153	3301.8850094140125	2319.3292730201274	1377.1699832425209	1155.2551502059594	1139.788206461164	1536.5873553057263	1373.626820437614	2489.8359869526107	0.869594025880076	0.5303797395144846	1.3261455881900455	0.9315188972984635	0.5531167476328763	0.4639884539623483	0.45777642078994407	0.6171440060139882	0.5516936969486249	1.0	11.281834995387811	-7.7609067216644405	24.999965353092136	0.573503311482841	0.9163886278040071	0.29310958002169574	0.2300877525326496	16.786865816337173	787852.9696912249	0.06938567980190405	0.08422443488289112	1.7341764264332452e-08	7.7609067216644405	0.34288531632116614	
SGPLSPAAVPGNQMPPRPPSGQS(ph)DSIMHPSMNQSSIAQDR	ddPTM_K562_Methotrexat_30min_R1	3	SGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDR	40	1	O14497-2;O14497;A0A087WUV6;H0Y488;A0A1B0GTU5;O14497-3	O14497-2	ARID1A	AT-rich interactive domain-containing protein 1A	1	SGPLSPAAVPGNQMPPRPPS(0.125)GQS(0.425)DS(0.425)IMHPS(0.017)MNQS(0.007)S(0.003)IAQDR;SGPLSPAAVPGNQMPPRPPS(0.108)GQS(0.442)DS(0.442)IMHPS(0.003)MNQS(0.003)S(0.001)IAQDR;SGPLSPAAVPGNQMPPRPPS(0.203)GQS(0.581)DS(0.203)IMHPS(0.008)MNQS(0.003)S(0.001)IAQDR	64.167	0.0003861	70986000.0	3523.92	2536.25	3185.3999999999996	2963.87	2862.0	2432.48	2693.57	3606.12	3520.0699999999997	4094.67	True	False	3369.012696222669	2955.322203621117	2516.8280710666163	2704.0321188050375	3238.403164933115	2902.5223336531726	3297.671639091288	3479.290715631726	3356.422714020426	3353.0855848364527	1.004749986537249	0.8813739252543603	0.750600605737111	0.8064309873369746	0.9657979443107679	0.8656272738098761	0.9834737454970546	1.037638505669526	1.000995241278381	1.0	11.711273591904533	-8.841090050720489	3.7310251543731443	1.014308731589158	0.8733792700399984	0.4529355034160768	0.06827767248465796	0.22214680355900854	6.025317064250369	0.03246896871096855	0.021536199216771728	1.4418163607036435e-09	8.841090050720489	-0.14092946154915953	
SGPPS(ph)PPSTATSFGGPRPR	ddPTM_K562_Methotrexat_30min_R1	4	SGPPSPPSTATSFGGPRPR	19	1	A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2;A0A087X0E3	A0A0A0MS59	SRCAP	Helicase SRCAP	1	SGPPS(0.924)PPS(0.076)TATSFGGPRPR;SGPPS(0.999)PPS(0.001)TATSFGGPRPR;S(0.001)GPPS(0.999)PPSTATSFGGPRPR;S(0.003)GPPS(0.779)PPS(0.162)T(0.053)AT(0.001)S(0.003)FGGPRPR	122.3	4.7755e-05	297109000.0	3610.3099999999995	3275.8599999999997	4714.790000000001	4075.9500000000003	3354.69	3002.6099999999997	3699.4100000000003	3905.77	3748.8199999999997	4219.1	True	False	3451.605095263131	3817.1401849006493	3725.2200104175845	3718.617791820625	3795.890535768512	3582.8218872304624	4529.096863408304	3768.4018552884913	3574.5381764493513	3454.9801060851014	0.9990231460910509	1.1048226234870908	1.078217499387774	1.0763065712798723	1.0986721831141604	1.037002175763675	1.3108894188511848	1.0907159345581685	1.0346045611532402	1.0	11.754461688203262														
SGQGFHGNSEVNAILS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	SGQGFHGNSEVNAILSPR	18	0	C9JW01;A0A0A0MR59;Q8TB72-2;Q8TB72-4;Q8TB72-3;Q8TB72	C9JW01	PUM2	Pumilio homolog 2	1	SGQGFHGNSEVNAILS(1)PR;SGQGFHGNSEVNAILS(1)PR;SGQGFHGNSEVNAILS(1)PR;SGQGFHGNSEVNAILS(1)PR	163.49	1.5676e-14	130485000.0	6184.9	5425.92	7849.6	7222.95	5933.76	6298.86	5634.54	7121.080000000001	6802.5	7841.4	True	False	5913.019201590153	6322.461055129381	6202.076231130946	6589.725187853325	6714.153446524644	7516.02554863951	6898.2290259118645	6870.627580133433	6486.253259771526	6421.246475280444	0.9208522401924939	0.9846158498149303	0.9658679595942584	1.0262376959397939	1.0456152823866502	1.1704932332956821	1.074281925241094	1.0699834691882564	1.010123701798605	1.0	12.648637661317355	-7.418371554322424	1.8423836644021971	1.0716900072392834	0.9541909247538417	0.5065731620905685	0.04597378722144898	0.28413037260267004	1.9045908737504071	0.015170214798701587	0.026710381229817677	3.816176437191528e-08	7.418371554322424	-0.11749908248544172	
SGRS(ph)PTGNTPPVIDSVSEK	ddPTM_K562_Methotrexat_30min_R1	2	SGRSPTGNTPPVIDSVSEK	19	1	P25054-2;P25054-3;P25054	P25054-2	APC	Adenomatous polyposis coli protein	1	S(0.134)GRS(0.859)PT(0.007)GNTPPVIDSVSEK;SGRS(0.999)PTGNTPPVIDSVSEK	202.16	3.5756e-20	22537200.0	2038.6	1638.01	3057.1000000000004	1925.06	1627.56	1674.4099999999999	1484.43	2101.82	1906.01	2729.8999999999996	True	False	1948.9855849507157	1908.663311090558	2415.4564877433777	1756.2929786484638	1841.6126677563052	1997.9660349487815	1817.3512146394116	2027.897799277083	1817.4000111219596	2235.488656728146	0.8718387271100023	0.8538013849213941	1.0805049180068897	0.7856416418676749	0.823807654855956	0.893749126811942	0.8129547914142767	0.9071384876741481	0.8129766195199131	1.0	11.126374510066878														
SGS(ph)MDPSGAHPSVR	ddPTM_K562_Methotrexat_30min_R1	3	SGSMDPSGAHPSVR	14	0	Q07666;Q07666-3;Q07666-2	Q07666	KHDRBS1	KH domain-containing, RNA-binding, signal transduction-associated protein 1	1	S(0.122)GS(0.877)MDPSGAHPSVR;S(0.004)GS(0.995)MDPSGAHPSVR;SGS(0.999)MDPS(0.001)GAHPSVR	147.51	1.1411e-08	207909000.0	17547.9	13593.599999999999	19555.6	20752.3	13777.9	12581.2	12889.599999999999	13247.900000000001	15550.5	16259.7	True	False	16776.515327262183	15839.711348307152	15451.146803086054	18932.978079024302	15589.935348054501	15012.338841082885	15780.420913223366	12781.963848018795	14827.560649184448	13314.910770285593	1.2599795535019076	1.18962204265432	1.1604393803049602	1.421938036661601	1.1708629233059527	1.127483247922726	1.185169107437052	0.9599736767702449	1.113605709042721	1.0	13.700755139926905	-8.810775981921527	1.1660792541156815	1.0251153661134653	1.2429436478174205	0.526507354425614	0.08400695737948859	0.4014314696753868	1.0783484414179756	0.0586249964039818	0.031934527376150525	1.5460517193556688e-09	8.810775981921527	0.21782828170395518	
SGS(ph)PAPETTNESVPFAQHSSLDSR	ddPTM_K562_Methotrexat_30min_R1	2	SGSPAPETTNESVPFAQHSSLDSR	24	0	O15047	O15047	SETD1A	Histone-lysine N-methyltransferase SETD1A	1	S(0.047)GS(0.95)PAPET(0.002)T(0.001)NESVPFAQHSSLDSR;S(0.152)GS(0.687)PAPET(0.153)T(0.008)NESVPFAQHSSLDSR	192.78	1.1798e-29	235700000.0	5358.9	4700.6	6874.3	5790.5	4381.299999999999	4880.9	4574.6	5377.4	5430.0	6580.2	True	False	5123.329172565682	5477.294253461383	5431.478372867852	5282.855855331224	4957.517745115812	5824.064846711083	5600.570499443865	5188.273794060662	5177.560485198	5388.462016558314	0.9507961932035709	1.0164856385050307	1.0079830489993904	0.9804014279208854	0.9200246248153473	1.0808399184803004	1.0393634551442987	0.9628487271725236	0.9608605329846939	1.0	12.395657840069042	-8.244640689409795	24.996674789061164	1.00837189149482	0.9795523939659135	0.1373550384061133	0.04141911784544715	2199.6109910218383	3273051.7609522115	0.014717563206317664	0.014689526164109765	5.693237621956621e-09	8.244640689409795	-0.028819497528906557	
SGS(ph)PNLPHSVSSYK	ddPTM_K562_Methotrexat_30min_R1	1	SGSPNLPHSVSSYK	14	0	Q5T481	Q5T481	RBM20	RNA-binding protein 20	1	S(0.012)GS(0.987)PNLPHSVSSYK	125.86	0.00078811	11090000.0	1948.3	1536.3	3022.6	2521.1	1280.8	1494.1	1423.6	1602.4	1899.2	2253.7	True	False	1862.6550648285508	1790.1474623649572	2388.1975662729815	2300.079077260264	1449.2476497716061	1782.8136793359893	1742.878538671859	1546.0426837510342	1810.906606535551	1845.533091200492	1.0092775218768477	0.9699893602018768	1.2940421267220379	1.2462952239800245	0.7852731856619769	0.9660155582343394	0.9443767478252814	0.8377214643956107	0.9812376787877496	1.0	10.849821890618863	-7.759304092985208	24.99999733615078	0.9145993859109163	1.1302031508562957	0.473361271726235	0.10886316314503135	53.16319058014701	622430.0351093793	0.03470551628833913	0.042621452653523156	1.7405876871499643e-08	7.759304092985208	0.21560376494537947	
SGS(ph)PSDNSGAEEMEVSLAKPK	ddPTM_K562_Methotrexat_30min_R1	1	SGSPSDNSGAEEMEVSLAKPK	21	1	P31749-2;P31749	P31749-2	AKT1	RAC-alpha serine/threonine-protein kinase	1	S(0.025)GS(0.529)PS(0.076)DNS(0.37)GAEEMEVSLAKPK	75.334	0.0049757	13156000.0	956.55	612.85	1674.4	1043.1	675.22	802.75	420.51	651.53	709.77	1148.6	True	False	914.5012073406303	714.1130458311293	1322.9663220298687	951.6530425172274	764.0232652082948	957.8700763583199	514.8200718578979	628.6153206092804	676.7729476204393	940.5774098384362	0.9722763887107548	0.7592283616016178	1.4065469871928094	1.0117753547586197	0.8122917446417639	1.01838516036958	0.5473447123786749	0.6683291710325663	0.7195292386797691	1.0	9.877402872698422	-8.38299140757069	1.6518382241780185	0.7182721595573652	1.0244481394454186	0.2529961561390298	0.2000477479506962	0.4806203087983835	2.610762016936129	0.09159514127265193	0.07607340193097896	4.140078658013761e-09	8.38299140757069	0.30617597988805334	
SGS(ph)PVATFK	ddPTM_K562_Methotrexat_30min_R1	1	SGSPVATFK	9	0	Q9BQ67	Q9BQ67	GRWD1	Glutamate-rich WD repeat-containing protein 1	1	S(0.235)GS(0.764)PVAT(0.001)FK	87.568	0.016576	12012000.0	4426.1	2890.0	6062.8	5112.7	3015.5	2849.1	2756.7	3818.5	3819.0	5517.2	True	False	4231.533943662496	3367.523378399224	4790.301133064193	4664.477528978837	3412.091105470237	3399.648252323249	3374.9601486068514	3684.2011906535986	3641.455523567432	4517.98161723892	0.9365983091911115	0.745360132841183	1.0602745958031798	1.032425079194865	0.7552246544011998	0.7524705809672773	0.7470061710143467	0.8154528952920196	0.8059916644355095	1.0	12.14146268536825	-7.775109331066472	24.998699706466414	0.7971683665345626	0.9378292333833536	0.2667619962284591	0.1043136668912847	301.8711927792231	552039.8176916278	0.03276063434043383	0.037340435653871656	1.6783814423357486e-08	7.775109331066472	0.14066086684879098	
SGS(ph)YSYLEER	ddPTM_K562_Methotrexat_30min_R1	1	SGSYSYLEER	10	0	O14974-5;O14974-4;O14974-3;O14974-2;O14974;A0A0U1RQZ1;H0YIM2;H0YIS3	O14974-5	PPP1R12A	Protein phosphatase 1 regulatory subunit 12A	1	S(0.155)GS(0.831)YS(0.014)YLEER	98.75399999999999	0.0077445	21055000.0	1022.3	1165.0	1484.2	1382.4	1143.5	1019.8	1086.1	1203.7	1454.2	1755.3	True	False	977.3609160674571	1357.4964483858466	1172.6867027930782	1261.2071383144616	1293.890293186938	1216.861916998087	1329.6855723879637	1161.3651887363449	1386.5945594060656	1437.3981607952355	0.6799514168897611	0.9444122619684002	0.815839852017268	0.8774236483068152	0.9001613668902273	0.8465726130641926	0.9250641949147338	0.807963458151236	0.9646558603073049	1.0	10.489244029852818	-3.000409015891103	0.03138250759012279	1.4684946619448636	8.097928259645596e-07	0.38969375542854623	0.06919784078696008	1418.638802274415	3.4187150834685727	49.964878077609164	126.06713361324388	0.0009990586494550257	3.000409015891103	-1.4684938521520376	
SGSDAGEARPPT(ph)PASPR	ddPTM_K562_Methotrexat_30min_R1	1	SGSDAGEARPPTPASPR	17	1	Q96FS4;F6RY50;E9PIB3	Q96FS4	SIPA1	Signal-induced proliferation-associated protein 1	1	SGSDAGEARPPT(0.784)PAS(0.216)PR	176.85	2.6868000000000003e-06	7797800.0	1903.5	1835.4	2331.6	1903.8	1894.0	2017.4	1737.1	2005.5	2123.9	2336.6	True	False	1819.8244191865442	2138.6686535342346	1842.2290231992615	1736.8968098401847	2143.0941978977366	2407.2339981878204	2126.6888940200083	1934.9654282717795	2025.1603525804858	1913.4190978830677	0.9510851131359184	1.1177209717935679	0.9627943116264659	0.9077450997336755	1.1200338703992097	1.2580798429633582	1.1114600540848025	1.0112606435320677	1.0583987349248496	1.0	10.901937187732596	-7.786430258728936	24.990368108217016	1.102925031923311	0.9927536652642338	0.27851803514825957	0.0841987084150526	317.384864633407	317376.33126148663	0.027979897677638286	0.0317389253963594	1.6351957182967044e-08	7.786430258728936	-0.11017136665907723	
SGSIVELIAGGGSSCS(ph)PVLSR	ddPTM_K562_Methotrexat_30min_R1	2	SGSIVELIAGGGSSCSPVLSR	21	0	P42858	P42858	HTT	Huntingtin	1	SGSIVELIAGGGSSCS(1)PVLSR;SGSIVELIAGGGS(0.009)S(0.258)CS(0.729)PVLS(0.004)R	220.16	1.3654e-41	59044000.0	4702.7	4259.5	5792.2	4964.7	4266.2	4110.8	4109.0	4744.5	3987.8	4584.5	True	False	4495.974938853986	4963.30997587941	4576.496375096396	4529.452459194016	4827.280077651176	4905.153920764596	5030.547847290435	4577.6332457918015	3802.4080484111564	3754.2026252867095	1.1975845173009614	1.3220676855449058	1.21903286313612	1.206501862388981	1.28583365349986	1.3065767648569548	1.3399777128189108	1.219335689277615	1.0128403892746107	1.0	11.87429080339968	-9.724206961551769	3.8705927545366086	0.9969575707888996	1.2687978513085003	0.8336312437136872	0.04611583775170754	0.08183183776048217	2.450708519563142	0.0405587223813212	0.012339726710121703	1.8870918476126037e-10	9.724206961551769	0.27184028051960074	
SGSLDDS(ph)FSDFQELPASSK	ddPTM_K562_Methotrexat_30min_R1	1	SGSLDDSFSDFQELPASSK	19	0	Q9UMZ2-6;Q9UMZ2-9;Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2	Q9UMZ2-6	SYNRG	Synergin gamma	1	S(0.001)GS(0.002)LDDS(0.757)FS(0.24)DFQELPASSK	117.55	5.9757e-05	0.0	673.52	341.31	665.52	630.59	364.05	379.8	269.71	325.92	537.28	649.74	True	False	643.9128672500765	397.70567622195097	525.8364468689194	575.3071537541347	411.92895604259303	453.1909747753223	330.19933314497524	314.45720886678544	512.3019700713039	532.0657898906721	1.210212871198478	0.7474746239627073	0.9882921564586351	1.0812707087827385	0.7742068065064575	0.8517574017837964	0.6205986917761128	0.5910118914643986	0.9628545563445655	1.0	9.055460835652827	-7.778363878086263	24.603970188012166	0.7732327235133994	0.9869655404578609	0.2664747575048183	0.1631376732195798	259.74120570585376	377596.62294305116	0.049844061110391844	0.056669904824919244	1.6658508774214536e-08	7.778363878086263	0.21373281694446145	
SGSMDPSGAHPS(ph)VRQTPSRQPPLPHR	ddPTM_K562_Methotrexat_30min_R1	1	SGSMDPSGAHPSVRQTPSRQPPLPHR	26	2	Q07666;Q07666-3	Q07666	KHDRBS1	KH domain-containing, RNA-binding, signal transduction-associated protein 1	1	SGSMDPS(0.008)GAHPS(0.953)VRQT(0.022)PS(0.017)RQPPLPHR	56.684	0.0022221	35410000.0	3997.1	3252.0	2850.3	4897.6	2795.0	3433.4	3345.4	3054.2	4464.4	4505.9	True	False	3821.3922699924	3789.337725451303	2252.0609816541664	4468.235012014542	3162.5914905618656	4096.855957855688	4095.691109351527	2946.78205486296	4256.8510184379265	3689.837846936279	1.0356531719043838	1.0269659217132372	0.6103414499702425	1.2109570114915962	0.8571085293593069	1.1103078584489454	1.1099921674748479	0.7986210172649489	1.1536688589100048	1.0	11.849341701879707														
SGSMDPSGAHPSVRQT(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	1	SGSMDPSGAHPSVRQTPSR	19	1	Q07666;Q07666-3;Q07666-2	Q07666	KHDRBS1	KH domain-containing, RNA-binding, signal transduction-associated protein 1	1	SGSMDPSGAHPS(0.039)VRQT(0.853)PS(0.108)R	75.877	0.0093759	4433000.0	1506.6	1449.1	975.57	1545.1	1068.0	1359.2	1132.5	1518.8	1922.2	2144.3	True	False	1440.371667951903	1688.5391445115283	770.8111889528658	1409.6434819225071	1208.4607198282913	1621.846163545597	1386.4919535304023	1465.3829431359657	1832.8373415557264	1755.9464913081656	0.820282209669634	0.961611958490592	0.43897191216721976	0.8027827094391324	0.6882104470780303	0.9236307436323614	0.7895980659965767	0.8345259667020192	1.0437888344708488	1.0	10.778033167177417	-9.451436442287545	0.9455398413438628	1.0250966856076589	0.7532354925672203	0.32163187746450883	0.13687850993276188	0.679008025459908	1.1215004403719213	0.12704349141760518	0.048771070733086196	3.536417717404727e-10	9.451436442287545	-0.27186119304043854	
SGSMDPSGAHPSVRQTPS(ph)RQPPLPHR	ddPTM_K562_Methotrexat_30min_R1	1	SGSMDPSGAHPSVRQTPSRQPPLPHR	26	2	Q07666;Q07666-3	Q07666	KHDRBS1	KH domain-containing, RNA-binding, signal transduction-associated protein 1	1	SGS(0.001)MDPS(0.003)GAHPS(0.148)VRQT(0.148)PS(0.7)RQPPLPHR	44.632	0.017247	28604000.0	2642.9	2097.4	2199.0	2861.3	1975.0	1767.7	2062.9	1884.3	2523.1	2733.3	True	False	2526.7212805191066	2443.9597002956857	1737.4599511130452	2610.4542714548384	2234.7471176599947	2109.2830071362214	2525.55783747273	1818.0281009685934	2405.801631713274	2238.272883781472	1.1288709695889774	1.091895326081382	0.7762502792678596	1.1662806132220038	0.998424782721077	0.9423707995660799	1.128351174592216	0.8122459572029966	1.0748473294501826	1.0	11.128170220922165	-6.545981620740709	24.99473299133281	0.9870710552772624	1.1196274866393692	0.153211461289268	0.1171194459397749	334.64272363158693	362044.9533150414	0.028046588396492128	0.07421284121614187	2.844581487044369e-07	6.545981620740709	0.13255643136210682	
SGSPNLPHS(ph)VSSYK	ddPTM_K562_Methotrexat_30min_R1	1	SGSPNLPHSVSSYK	14	0	Q5T481	Q5T481	RBM20	RNA-binding protein 20	1	S(0.382)GS(0.162)PNLPHS(0.456)VSSYK	124.16	0.00088566	5862600.0	2446.4	1889.3	3562.1	2875.0	1926.3	1915.8	1998.1	2055.0	2320.9	3403.3	True	False	2338.859185236651	2201.474712390883	2814.4638889767048	2622.953213725459	2179.642214049848	2286.0012361099584	2446.22478794622	1982.7244852149115	2213.001865579381	2786.9293913487304	0.8392244139722403	0.7899284134089534	1.0098798691181226	0.9411624212180291	0.7820945233904951	0.8202580385445831	0.8777491082263743	0.7114369281725414	0.7940645616817734	1.0	11.444460735958689	-7.76558791848068	24.999963292288466	0.8183126779402823	0.8957424028891482	0.10093151352752161	0.08907869828302949	214.3038117581631	1291438.8569979204	0.027570433089293418	0.032390689049927895	1.7155843724366027e-08	7.76558791848068	0.07742972494886591	
SGSSHAPQDVSLSY(ph)PQHHVGNSSPTSTSPSSR	ddPTM_K562_Methotrexat_30min_R1	1	SGSSHAPQDVSLSYPQHHVGNSSPTSTSPSSR	32	0	I3L521;F5GXV8;J3KPD3	I3L521	RBM7		1	SGSSHAPQDVS(0.102)LS(0.102)Y(0.212)PQHHVGNS(0.091)S(0.091)PT(0.036)S(0.091)T(0.091)S(0.091)PS(0.013)S(0.079)R	51.978	0.0020655	22915000.0	1278.8	1194.7	1522.4	1525.5	1084.2	1247.2	1132.7	1136.1	1129.5	1652.2	True	False	1222.5854831918844	1392.103868572163	1202.8690448269667	1391.761783491544	1226.7913037807427	1488.2037486566123	1386.7368086215329	1096.1427190523905	1076.9897915342801	1352.9705698546622	0.9036305078854864	1.0289239837062416	0.8890578048243728	1.0286711437049578	0.9067390903502994	1.099952786716179	1.0249571125338652	0.8101748430271765	0.7960186389346012	1.0	10.401914742463962	-9.260973587681214	24.998198017476458	0.8523225531178358	0.9845823893240181	0.28362212203621906	0.0820630060177348	46.468564957307954	2494065.7989042057	0.03992178253727904	0.02120623672537182	5.48310310281994e-10	9.260973587681214	0.1322598362061823	
SGSSHAPQDVSLSYPQHHVGNSS(ph)PTSTSPSR	ddPTM_K562_Methotrexat_30min_R1	1	SGSSHAPQDVSLSYPQHHVGNSSPTSTSPSR	31	0	F5GY08;Q9Y580	F5GY08	RBM7	RNA-binding protein 7	1	SGSSHAPQDVSLS(0.001)YPQHHVGNS(0.203)S(0.56)PT(0.079)S(0.114)T(0.011)S(0.011)PS(0.021)R	111.49	5.0222999999999996e-15	20820000.0	1791.7	1909.1	2480.0	1968.3	1805.4	1835.0	1727.8	2385.4	2117.9	2339.5	True	False	1712.939013321004	2224.5463258484288	1959.4818912052535	1795.7421949828947	2042.8417449232168	2189.587779654333	2115.303132282408	2301.504129942408	2019.4392912708736	1915.7938797814923	0.894114461581	1.16116162042555	1.0228041293402317	0.9373358031542046	1.0663160408238777	1.1429140695992144	1.104139205478447	1.201331810395442	1.0541005024513403	1.0	10.903726634560066	-7.997974492854329	24.91917000702393	1.112342111146594	1.014616594164891	0.22694085331907166	0.08183489406630143	90.9771855500155	1119231.9122731304	0.024726225033411896	0.027854264086079893	1.0046747954808408e-08	7.997974492854329	-0.09772551698170306	
SGSSHAPQDVSLSYPQHHVGNSSPTSTSPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SGSSHAPQDVSLSYPQHHVGNSSPTSTSPSR	31	0	F5GY08;Q9Y580	F5GY08	RBM7	RNA-binding protein 7	1	SGSSHAPQDVSLS(0.001)Y(0.001)PQHHVGNS(0.206)S(0.295)PT(0.06)S(0.025)T(0.035)S(0.025)PS(0.351)R	93.751	2.5728000000000004e-07	13865000.0	2546.5	2296.6	3124.6	2417.6	2437.8	2395.8	2222.7	2913.4	3059.5	2859.2	True	False	2434.5589090930057	2676.0741144746207	2468.789160185455	2205.6527615661466	2758.4134295855865	2858.754442777031	2721.1970552865537	2810.934070669161	2917.2645127925	2341.3711737855297	1.0398004965427203	1.1429516791000478	1.0544202422181168	0.9420346445967585	1.178118813654728	1.220974476317224	1.1622236942837736	1.200550387798805	1.2459641365088927	1.0	11.193137945353884	-7.85782284283244	12.640967248569028	1.1805646657204587	1.0525312164571667	0.370675204761176	0.07733194374944934	0.5640358836710633	70.50682921512421	0.02335235845707897	0.026483772441407948	1.3873216289438241e-08	7.85782284283244	-0.12803344926329197	
SGSSHAPQDVSLSYPQHHVGNSSPTSTSPSS(ph)R	ddPTM_K562_Methotrexat_30min_R1	3	SGSSHAPQDVSLSYPQHHVGNSSPTSTSPSSR	32	0	I3L521;F5GXV8;J3KPD3	I3L521	RBM7		1	SGSSHAPQDVSLSYPQHHVGNS(0.01)S(0.01)PT(0.014)S(0.039)T(0.039)S(0.014)PS(0.014)S(0.858)R;SGSSHAPQDVSLSYPQHHVGNS(0.009)S(0.026)PT(0.012)S(0.012)T(0.017)S(0.006)PS(0.006)S(0.911)R;SGSSHAPQDVSLSYPQHHVGNS(0.047)S(0.108)PT(0.064)S(0.064)T(0.028)S(0.013)PS(0.013)S(0.662)R	121.09	5.2960000000000004e-21	109367000.0	7753.0	6705.6	9151.6	7390.1	6984.099999999999	7203.3	6164.2	8118.700000000001	7576.1	9248.8	True	False	7412.187403180077	7813.586424288518	7230.804224013708	6742.221406870443	7902.6315668097	8595.23577830194	7546.678763754619	7833.160719277039	7223.888764624047	7573.75269729561	0.9786677357219198	1.0316664322930094	0.9547188181356436	0.8902088140899973	1.0434235025433989	1.1348714596095901	0.9964252947484463	1.0342509232013948	0.9538057358545005	1.0	12.88679259891187														
SGSSS(ph)PDSEITELKFPSINHD	ddPTM_K562_Methotrexat_30min_R1	4	SGSSSPDSEITELKFPSINHD	21	1	B4E1E0;P17812-2;P17812	B4E1E0	CTPS1	CTP synthase;CTP synthase 1	1	S(0.013)GS(0.045)S(0.161)S(0.595)PDS(0.186)EITELKFPSINHD;S(0.042)GS(0.031)S(0.13)S(0.783)PDS(0.013)EITELKFPSINHD;S(0.023)GS(0.023)S(0.099)S(0.441)PDS(0.415)EITELKFPSINHD;S(0.022)GS(0.022)S(0.137)S(0.618)PDS(0.201)EITELKFPSINHD	185.3	8.9294e-19	504563000.0	9064.099999999999	6595.469999999999	12659.5	9592.2	6305.0	6356.73	6439.37	8142.4	8151.6	11346.8	True	False	8665.65301704689	7685.259313678444	10002.443952303584	8751.266718851251	7134.218013593051	7585.078107118301	7883.562640887471	7856.027176843746	7772.6338952375745	9291.784567259949	0.9326144998648308	0.8271026150087278	1.0764825507844507	0.9418284136382974	0.7677984742275249	0.8163209179262173	0.8484444063270241	0.8454809859157558	0.836506038100025	1.0	13.18173998989052	-7.674670289378735	10.431445088646063	0.8427479730348801	0.9459343003817902	0.24055409592563837	0.07903959393878539	0.5053119481663896	56.96169918602173	0.022940679236954576	0.02961354889125266	2.1150941819605517e-08	7.674670289378735	0.10318632734691002	
SGSSSPDS(ph)EITELKFPSINHD	ddPTM_K562_Methotrexat_30min_R1	1	SGSSSPDSEITELKFPSINHD	21	1	B4E1E0;P17812-2;P17812	B4E1E0	CTPS1	CTP synthase;CTP synthase 1	1	SGSS(0.001)S(0.006)PDS(0.992)EITELKFPSINHD	138.28	1.0339e-12	386540000.0	2503.9	2218.3	4197.4	2932.7	2157.8	1891.9	1780.9	2753.5	2526.5	3774.7	True	False	2393.8315540852054	2584.836370347057	3316.42310086489	2675.5947443104887	2441.5885217654372	2257.482899361326	2180.3121589777425	2656.657844301344	2409.0435664553856	3091.065252409148	0.7744357878629301	0.8362283417771459	1.0729062087188552	0.8655898616909348	0.7898857909461748	0.7303252163964719	0.7053594734949148	0.8594635270901413	0.7793570726395372	1.0	11.59388839448211	-7.654208444083641	4.8917431877780695	0.7946940966234199	0.9004224478640677	0.10506192872165021	0.10428427194355959	0.3793850162541237	14.757352745405267	0.031498889271623476	0.040838460530216954	2.2171320291678637e-08	7.654208444083641	0.10572835124064772	
SGST(ph)SPLGFAR	ddPTM_K562_Methotrexat_30min_R1	1	SGSTSPLGFAR	11	0	O75385	O75385	ULK1	Serine/threonine-protein kinase ULK1	1	S(0.06)GS(0.06)T(0.548)S(0.332)PLGFAR	113.67	0.005441	16244000.0	1390.5	1460.6	1939.7	1818.9	1304.8	1446.2	1157.6	1819.0	1491.3	1932.7	True	False	1329.3752849376883	1701.9393240449506	1532.5834775688818	1659.439861024432	1476.4040704419042	1725.6576822540046	1417.2212674673658	1755.0247389809842	1421.9697885038272	1582.6693017540883	0.8399577116105862	1.075360040255203	0.9683535757408728	1.0485070122894644	0.9328569580553503	1.0903463410463834	0.8954626629180494	1.1089017377388142	0.8984629871368857	1.0	10.628144120958066	-6.2444705377755225	24.358588240393434	1.003099442967337	0.8399575265279651	0.3013817449070776	0.07401009715198471	2817.7889513595583	4044817.663133415	0.016254933129271544	0.4450612738880917	5.695468604656922e-07	6.2444705377755225	-0.16314191643937193	
SGSTS(ph)PLGFAR	ddPTM_K562_Methotrexat_30min_R1	1	SGSTSPLGFAR	11	0	O75385	O75385	ULK1	Serine/threonine-protein kinase ULK1	1	SGS(0.001)T(0.224)S(0.775)PLGFAR	136.81	8.894899999999999e-05	17984000.0	2616.1	1811.1	2973.7	2481.3	2218.9	2012.4	1775.0	2718.3	2756.7	2598.2	True	False	2501.0993764296936	2110.35349156361	2349.5610080149427	2263.7682814667787	2510.724242721904	2401.267818951708	2173.088933789371	2622.6958482528944	2628.541618700798	2127.640802927238	1.1755270781556013	0.9918748919743202	1.1043034166210686	1.06398047938931	1.1800508052240841	1.1286058321724277	1.0213608099636013	1.2326779241329424	1.2354254604839379	1.0	11.055038894346847	-7.744968078844703	24.855546513718934	1.1388503588051788	1.0788025535806	0.07180423005822556	0.08414157899912537	553.2375936170889	834843.3013082306	0.02471834635938832	0.03181568874783381	1.7990031391163786e-08	7.744968078844703	-0.060047805224578754	
SGSYS(ph)YLEER	ddPTM_K562_Methotrexat_30min_R1	1	SGSYSYLEER	10	0	O14974-5;O14974-4;O14974-3;O14974-2;O14974;A0A0U1RQZ1;H0YIM2;H0YIS3	O14974-5	PPP1R12A	Protein phosphatase 1 regulatory subunit 12A	1	S(0.008)GS(0.067)YS(0.925)YLEER	178.53	0.00025926	18564000.0	1133.6	1368.4	1644.8	1269.7	1271.2	1096.6	1068.4	1189.2	1324.6	1378.5	True	False	1083.768301334314	1594.504841176989	1299.5789575219349	1158.3873723364234	1438.3850815034857	1308.5024300648188	1308.0158968228527	1147.3751619550235	1263.0196351184663	1128.8402920618887	0.9600723051395975	1.412515882352621	1.1512513919468472	1.026174721510485	1.2742148660163402	1.1591563831184368	1.158725380393439	1.01641939078847	1.1188647712170972	1.0	10.140625673209946	-9.18817871249216	5.837184881124259	1.0510551599175162	1.1719319166762865	0.16654016541749006	0.11982442907681848	0.3895633318637677	23.736734613189736	0.055802052154593905	0.0316207072806083	6.483675749215944e-10	9.18817871249216	0.1208767567587703	
SGSYSGRS(ph)PS(ph)PY(ph)GR	ddPTM_K562_Methotrexat_30min_R1	1	SGSYSGRSPSPYGR	14	1	Q9NYV4-2;J3QSD7;Q9NYV4-3;Q9NYV4	Q9NYV4-2	CDK12	Cyclin-dependent kinase 12	3	S(0.007)GS(0.052)Y(0.004)S(0.022)GRS(0.927)PS(0.998)PY(0.99)GR	89.74700000000001	0.017053	11248000.0	2962.4	2461.1	4517.5	3515.7	2365.3	2866.7	2724.8	2999.8	3371.2	3897.5	True	False	2832.176443077605	2867.754943452709	3569.3384852902104	3207.484039476382	2676.3784088107277	3420.649203234373	3335.9057615714264	2894.2953336971746	3214.473647826795	3191.624982452818	0.8873775768295401	0.8985250332414652	1.118345201868646	1.0049689600472345	0.8385629337798595	1.0717578731964763	1.045206056448313	0.9068406688159394	1.0071589442680755	1.0	11.640075428784902														
SGTAETEPVEQDS(ph)SQPSLPLVR	ddPTM_K562_Methotrexat_30min_R1	1	SGTAETEPVEQDSSQPSLPLVR	22	0	A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0;H7C3N7	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	SGTAET(0.001)EPVEQDS(0.579)S(0.413)QPS(0.008)LPLVR	77.959	0.0019190000000000001	8184300.0	1633.0	1271.3	1533.1	1300.1	1414.6	985.55	1194.9	1650.0	1824.6	1710.6	True	False	1561.2152752989903	1481.3607165947853	1211.323261051118	1186.1222515354686	1600.6446950085206	1175.993589230697	1462.8867419633348	1591.9685647710967	1739.7747442527195	1400.7937639470917	1.11452186287571	1.0575152136747639	0.8647406150909092	0.8467500941703712	1.142669774955521	0.8395194349788057	1.044326994889869	1.136476050753768	1.2419920683759063	1.0	10.452028850971502	-9.106570428247364	4.032905561397643	1.140259439231102	0.9754617635300911	0.24546944432948692	0.11495565629144125	0.3117600444936882	8.77258495634864	0.05758280107248866	0.03215588973285681	7.82401315078708e-10	9.106570428247364	-0.164797675701011	
SGTNS(ph)PPPPFSDWGR	ddPTM_K562_Methotrexat_30min_R1	1	SGTNSPPPPFSDWGR	15	0	D6RAU6;D6REP2;D6RAJ6;Q9UKT5-2;Q9UKT5	D6RAU6	FBXO4	F-box only protein 4	1	S(0.003)GT(0.023)NS(0.973)PPPPFSDWGR	106.3	0.0016209	34348000.0	2793.4	2566.6	2898.6	2682.6	2778.1	2372.0	2288.4	2732.5	2615.2	3190.9	True	False	2670.605480722719	2990.687025259325	2290.22347171272	2447.4206230051896	3143.4688443398627	2830.3554296131224	2801.631952723152	2636.3964262042564	2493.6199228158025	2612.9970895468114	1.022046863889121	1.1445428076531148	0.8764737935892335	0.9366335051791662	1.2030127614436243	1.0831835369950638	1.0721909962819962	1.0089549799925355	0.954314083544688	1.0	11.351489802393607	-9.501342451876367	5.246685838943689	0.9776910029114273	1.0481332352314	0.09593087796541055	0.08872988059889171	0.46138304129977087	38.08901034955363	0.05890083851508349	0.024764113607079863	3.152517805248915e-10	9.501342451876367	0.0704422323199726	
SGTPPRQGS(ph)ITSPQANEQSVTPQR	ddPTM_K562_Methotrexat_30min_R1	2	SGTPPRQGSITSPQANEQSVTPQR	24	1	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	S(0.042)GT(0.042)PPRQGS(0.86)IT(0.039)S(0.016)PQANEQS(0.001)VTPQR;S(0.149)GT(0.044)PPRQGS(0.795)IT(0.009)S(0.004)PQANEQSVTPQR	71.65100000000001	0.0011599	32068000.0	1261.24	868.1899999999999	1671.8400000000001	1670.46	919.45	892.36	966.98	1452.25	1271.7	1575.93	True	False	1205.7973997661352	1011.6436407932256	1320.9436310453993	1524.0133653564642	1040.3737910544219	1064.7959406279792	1183.8498801102228	1401.1735443568643	1212.5789445720616	1290.5138059260735	0.9343545138603567	0.7839076468207712	1.0235796199774008	1.1809353440142636	0.8061702139698141	0.8250945753066787	0.9173477065289444	1.085748589377842	0.9396094323081761	1.0	10.333729860138558	-9.22097843889412	24.37889421393994	1.0095093260334973	0.9243790655351385	0.10211407718263554	0.11408884206893126	946.1943417161584	570110.6633204047	0.05762226744591435	0.033267672271985044	6.012035842644565e-10	9.22097843889412	-0.08513026049835881	
SGVS(ph)ITIDDPVR	ddPTM_K562_Methotrexat_30min_R1	2	SGVSITIDDPVR	12	0	S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5;G3V3B0;Q9UKV3-3;Q9UKV3-2	S4R3H4	ACIN1	Apoptotic chromatin condensation inducer in the nucleus	1	S(0.005)GVS(0.939)IT(0.056)IDDPVR;S(0.083)GVS(0.916)IT(0.001)IDDPVR	153.74	4.9728e-09	8332200.0	2550.8999999999996	2151.3999999999996	2405.9	2647.8	2273.5	2183.43	1992.37	2582.6000000000004	2070.78	2765.2	True	False	2438.7654903614175	2506.8822824526255	1900.9344685688386	2415.671484974703	2572.505099746836	2605.346945902267	2439.2096895853138	2491.7684941683865	1974.5098897860626	2264.3954846641527	1.0770051021909395	1.1070867697055302	0.8394887206952626	1.0668063513353045	1.1360670506408386	1.1505706328895473	1.0772012689943553	1.1004122341013929	0.8719810223782154	1.0	11.144910236619573	-9.752950527983627	24.99920681325867	0.9359904983376188	1.0680378468210565	0.2759439152463593	0.08637569566844645	230.10179889512756	677651.5090541599	0.0638614473720378	0.023274814682092474	1.7662390077426241e-10	9.752950527983627	0.1320473484834377	
SGVSS(ph)DNEDDDDEEDGNYLHPSLFASK	ddPTM_K562_Methotrexat_30min_R1	2	SGVSSDNEDDDDEEDGNYLHPSLFASK	27	0	Q12872;Q12872-2	Q12872	SFSWAP	Splicing factor, suppressor of white-apricot homolog	1	S(0.004)GVS(0.111)S(0.885)DNEDDDDEEDGNYLHPSLFASK;S(0.024)GVS(0.244)S(0.732)DNEDDDDEEDGNY(0.001)LHPSLFASK	140.84	5.494299999999999e-22	111589000.0	3487.1000000000004	2644.6000000000004	5025.3	3501.8	2288.04	2523.5	2432.3599999999997	3356.9	3602.8999999999996	4521.8	True	False	3333.8112593356464	3081.5751994860148	3970.5582047878065	3194.8026308952412	2588.9573646029244	3011.130660467416	2977.8786473193895	3238.835924290966	3435.4019653996074	3702.85820286213	0.9003345731032238	0.832215286316961	1.0722955045156084	0.8627936733914935	0.699178100474327	0.8131909177996495	0.8042108242269805	0.87468537730867	0.9277703269177869	1.0	11.854423588709986	-12.642579137946512	17.160266066010422	1.000000101265216	0.8623115716528773	0.1635376524562182	0.09126009211332098	3.7843283132066347e-07	7.884894474220888e-09	0.09458630125866567	0.022940530945814955	2.277303229625304e-13	12.642579137946512	-0.13768852961233868	
SGYHDDS(ph)DEDLLE	ddPTM_K562_Methotrexat_30min_R1	2	SGYHDDSDEDLLE	13	0	Q99523-2;Q99523	Q99523-2	SORT1	Sortilin	1	S(0.002)GYHDDS(0.998)DEDLLE;S(0.018)GYHDDS(0.982)DEDLLE	112.64	0.0015682	878200000.0	9879.0	8426.6	12126.3	10835.1	8612.6	7963.5	7710.8	9343.6	8833.5	10148.5	True	False	9444.7309887806	9818.952422290275	9581.15534569446	9885.203605577992	9745.307861042262	9502.333669360922	9440.143183472155	9014.980291997103	8422.832513074869	8310.508309024357	1.1364805421738877	1.1815104512473567	1.152896428163162	1.1894824285108623	1.1726488318963426	1.1434118487123544	1.1359284934738747	1.084768820001992	1.0135159246430858	1.0	13.020721006240276	-9.489123799153072	1.3019549275783144	0.9951158768698971	1.166111657560842	0.9417327895764308	0.015363157582249942	0.09173821334504291	0.2761023035288078	0.013599281426158343	0.004654298736229621	3.2424717489569663e-10	9.489123799153072	0.1709957806909448	
SGYIS(ph)ESENSEISQQVR	ddPTM_K562_Methotrexat_30min_R1	2	SGYISESENSEISQQVR	17	0	A0A075B754;Q96QE3-2;Q96QE3	A0A075B754	ATAD5	ATPase family AAA domain-containing protein 5	1	S(0.001)GYIS(0.596)ES(0.403)ENSEISQQVR;SGYIS(0.683)ES(0.317)ENSEISQQVR	187.56	1.3037e-10	33184000.0	4141.1	3298.81	4339.799999999999	4646.1	3477.99	3259.6	3317.45	3484.2	4416.9	4717.7	True	False	3959.0622024131344	3843.88228231735	3428.935286876028	4238.783626535606	3935.40664696217	3889.471567608319	4061.4726103659427	3361.6587111366407	4211.5592830701735	3863.278814552318	1.0247932889285694	0.994979256438364	0.887571270797181	1.0971984757012165	1.018670107924429	1.006779928219868	1.0513019653324172	0.8701568984547118	1.0901515228996523	1.0	11.91561008593282	-7.262656799792298	24.999996993122302	1.014570229757289	0.9717010767498032	0.10075422711473592	0.06743342199084987	308.5599717458927	6336398.070032518	0.0183991455928461	0.02921154716484267	5.461893154314657e-08	7.262656799792298	-0.04286915300748573	
SGYSS(ph)PGSPGTPGSR	ddPTM_K562_Methotrexat_30min_R1	1	SGYSSPGSPGTPGSR	15	0	I3L170;A0A0G2JQJ7;A0A0G2JPD5;A0A0G2JS76;A0A0G2JMX7;P10636-3;P10636-2;P10636-4;P10636-6;P10636-5;P10636-7;P10636-8;P10636;P10636-9	I3L170	MAPT	Microtubule-associated protein;Microtubule-associated protein tau	1	SGYS(0.094)S(0.53)PGS(0.364)PGT(0.001)PGS(0.011)R	128.95	0.00030673	9653600.0	3542.0	3105.3	4291.6	4001.8	2684.9	3310.2	3054.0	3569.2	4006.0	4272.5	True	False	3386.2979210710478	3618.398043924953	3390.8518081840575	3650.968407195323	3038.011410736872	3949.8493014778073	3738.937241573374	3443.669212958183	3819.761934383644	3498.708848628523	0.9678707396296952	1.0342095328519112	0.969172330390754	1.043518785115968	0.8683235851213393	1.1289448400446722	1.0686620131420823	0.9842685864838638	1.0917633045919133	1.0	11.772606897763257	-8.283764588385276	24.96438716511806	1.0546154136789188	0.9831213929976654	0.30119169750783514	0.0590738581127505	1097.9274098939181	1227714.0938278702	0.02016080122740637	0.017793545798206512	5.202779395137382e-09	8.283764588385276	-0.07149402068125332	
SGYSSPGS(ph)PGTPGSR	ddPTM_K562_Methotrexat_30min_R1	1	SGYSSPGSPGTPGSR	15	0	I3L170;A0A0G2JQJ7;A0A0G2JPD5;A0A0G2JS76;A0A0G2JMX7;P10636-3;P10636-2;P10636-4;P10636-6;P10636-5;P10636-7;P10636-8;P10636;P10636-9	I3L170	MAPT	Microtubule-associated protein;Microtubule-associated protein tau	1	SGYS(0.002)S(0.028)PGS(0.964)PGT(0.006)PGSR	123.68	0.00054686	9953800.0	2839.5	2608.9	3353.7	3557.9	2439.9	2219.1	2740.9	2880.6	2727.2	3438.6	True	False	2714.6789799212997	3039.9763812822607	2649.8042010222	3245.9844309961095	2760.7896163942396	2647.9096685727163	3355.616596407484	2779.287665260378	2600.4130672618758	2815.836219284738	0.9640755954942813	1.079599857570714	0.9410363368702201	1.1527603802967756	0.9804510636969926	0.9403635234315306	1.1916945216578887	0.9870203551704994	0.9234958515884198	1.0	11.459347707949355	-9.512596722933875	24.932214459728126	0.9595846193920075	1.0365310639291985	0.12004761244718631	0.08314918869694524	957.5487932799791	2321927.916130689	0.048304987012269505	0.020706058387214777	3.071873143652712e-10	9.512596722933875	0.07694644453719102	
SHASASLY(ph)LLMR	ddPTM_K562_Methotrexat_30min_R1	2	SHASASLYLLMR	12	0	Q96N67-4;Q96N67-3;Q96N67-2;Q96N67-6;Q96N67-5;Q96N67;A0A1B0GWE0	Q96N67-4	DOCK7	Dedicator of cytokinesis protein 7	1	S(0.001)HAS(0.001)AS(0.001)LY(0.998)LLMR;SHASASLY(1)LLMR	74.944	0.020896	9426700.0	968.69	1088.24	1186.12	1196.82	993.53	1083.19	921.76	1265.41	1290.25	1526.23	True	False	926.1075474766556	1268.0531630827577	937.1696212888609	1091.8966487829239	1124.1966095234093	1292.501137353558	1128.488144005459	1220.9048130587848	1230.266559120943	1249.814957528919	0.7409957305261541	1.014592724662136	0.749846699820102	0.8736466484140785	0.899490442766122	1.0341539998121294	0.9029241786613418	0.9768684601700607	0.9843589658691345	1.0	10.287498795855932	-7.984298297782219	3.3344609484463574	0.9735823802123321	0.8506963898793436	0.4029153279365495	0.07709994201372604	0.2649078327699119	6.1844901476722205	0.024416935004454687	0.02675395571047767	1.0368160278548176e-08	7.984298297782219	-0.12288599033298853	
SHATTEPEQTEPEQREPT(ph)PYPDER	ddPTM_K562_Methotrexat_30min_R1	1	SHATTEPEQTEPEQREPTPYPDER	24	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	SHATTEPEQT(0.002)EPEQREPT(0.833)PY(0.165)PDER	67.668	0.018771	9433000.0	473.78	363.37	451.77	573.98	319.8	563.78	363.05	379.36	484.95	523.6	True	False	452.9531984881537	423.4107162660641	356.94965080233726	523.6600645614399	361.8593054317296	672.7225059474226	444.4732041759051	366.01769377670513	462.40478034931334	428.7709662122634	1.0563989499790871	0.9874985706388859	0.8324949190370998	1.2213048592991755	0.8439454486118141	1.5689553606910756	1.0366215047216334	0.8536438392974299	1.0784423778367482	1.0	8.744063408257635	-5.936693794966228	12.694108348881848	1.049106089616419	1.102395265785565	9.062307553997506e-05	0.2084072552455967	20499950.202211116	130779684.59233978	0.051732442612354004	26715871.11285429	1.156927661754258e-06	5.936693794966228	0.05328917616914586	
SHDFYSHELS(ph)SPVDSPSSLR	ddPTM_K562_Methotrexat_30min_R1	1	SHDFYSHELSSPVDSPSSLR	20	0	Q13233	Q13233	MAP3K1	Mitogen-activated protein kinase kinase kinase 1	1	SHDFYSHELS(0.573)S(0.414)PVDS(0.004)PS(0.005)S(0.005)LR	97.25299999999999	0.00024617	9536900.0	763.95	659.4	952.13	833.29	806.15	666.27	593.5	939.42	900.98	1013.3	True	False	730.367672727902	768.3546421164175	752.2909246263129	760.2367594661871	912.1728551400531	795.0172479293147	726.607482931826	906.3800661316751	859.0936364555607	829.7815509222426	0.880192710860046	0.9259721926360577	0.9066132210220818	0.9161890362845964	1.0992927646152635	0.9581042709924199	0.8756611690441346	1.0923116633821262	1.0353250629647524	1.0	9.696587770955272	-6.869933489838072	0.4687515950879719	1.0194742664257477	0.8309742257587678	0.3201322122853387	0.0653378149526776	3.7734729502738262	0.9673159511255819	0.0519813911009458	0.37206418281437403	1.3491694857467113e-07	6.869933489838072	-0.1885000406669799	
SHDFYSHELSS(ph)PVDSPSSLR	ddPTM_K562_Methotrexat_30min_R1	1	SHDFYSHELSSPVDSPSSLR	20	0	Q13233	Q13233	MAP3K1	Mitogen-activated protein kinase kinase kinase 1	1	SHDFYSHELS(0.102)S(0.535)PVDS(0.121)PS(0.121)S(0.121)LR	105.16	0.00015631	22807000.0	658.73	556.78	584.29	557.87	451.75	539.74	393.99	625.19	596.64	661.93	True	False	629.7730179410313	648.7784313581728	461.65551379528904	508.96240324905114	511.1630432419759	644.03711618018	482.3522867739008	603.2017133389344	568.902336627723	542.0480627671571	1.1618398094184452	1.1969020386239493	0.8516874157589202	0.9389617604217537	0.9430216217958365	1.1881550003008374	0.8898699578622065	1.1128196091313152	1.0495422374973074	1.0	9.082276969105889	-6.729347887461013	24.985934925866214	0.9998214131878415	1.1793712518739978	0.36601958815901536	0.09606673449538473	211.99774119818207	165055.38029564376	0.024656788254970058	0.0652241006268642	1.864885243784166e-07	6.729347887461013	0.17954983868615637	
SHEGETAYIR	ddPTM_K562_Methotrexat_30min_R1	1	SHEGETAYIR	10	0	J3KTL2;Q07955;J3KSR8	J3KTL2	SRSF1	Serine/arginine-rich splicing factor 1	0		112.13	0.0036236999999999997	4493500.0	70.758	132.15	52.989	119.93	149.19	0.0	0.0	54.762	0.0	139.6	False	True	67.64756304323694	153.9855413340683	41.86733303753028	109.41592310333719	168.8110999917441	0.0	0.0	52.835989420602914	0.0	114.31708724834208	0.5917537322857045	1.3470037160722141	0.36623862665935336	0.9571265830596469	1.4766917532198787	0.0	0.0	0.46218803061192576	0.0	1.0	6.836897252522045	-8.277301954207504	24.99151464216608	0.24054699588653025	0.9381562579529951	0.3834215677168744	0.4128078974497824	811.4151571600815	1278381.7457959207	0.1398864549481512	0.12376797499576885	5.280779645646112e-09	8.277301954207504	0.6976092620664648	
SHHAPMS(ph)PGSSGGGGQPLAR	ddPTM_K562_Methotrexat_30min_R1	10	SHHAPMSPGSSGGGGQPLAR	20	0	O14497-2;O14497	O14497-2	ARID1A	AT-rich interactive domain-containing protein 1A	1	SHHAPMS(1)PGSSGGGGQPLAR;SHHAPMS(0.822)PGS(0.165)S(0.013)GGGGQPLAR;SHHAPMS(0.998)PGS(0.001)SGGGGQPLAR;SHHAPMS(0.999)PGS(0.001)SGGGGQPLAR;SHHAPMS(1)PGSSGGGGQPLAR;SHHAPMS(0.999)PGSSGGGGQPLAR;S(0.004)HHAPMS(0.992)PGS(0.003)S(0.001)GGGGQPLAR;S(0.005)HHAPMS(0.993)PGS(0.002)S(0.001)GGGGQPLAR;SHHAPMS(0.981)PGS(0.018)S(0.001)GGGGQPLAR;SHHAPMS(0.996)PGS(0.003)S(0.001)GGGGQPLAR	145.99	8.8027e-13	597191200.0	16880.44	16017.890000000001	20223.96	19067.15	14999.28	14863.77	15659.815999999999	16517.440000000002	16733.23	18951.78	True	False	16138.39606966814	18664.57406492288	15979.227172765879	17395.56256316015	16971.948226316563	17735.983188878843	19171.92836888887	15936.512273025888	15955.305789637152	15519.428995497026	1.0398833664789284	1.2026585559519245	1.0296272612479662	1.120889342527195	1.0935936000764581	1.1428244682214115	1.235350113361234	1.0268749112902207	1.0280858783056126	1.0	13.921787857144123	-9.48031542410446	24.93558400516072	1.0185219728913664	1.1230821065776273	0.39120883735683465	0.06024203511811681	449.9153244251482	263582.36670966016	0.03215135959357635	0.015442954562382708	3.3089071129634793e-10	9.48031542410446	0.10456013368626094	
SHIASPSPCPDRMPLPS(ph)PTESR	ddPTM_K562_Methotrexat_30min_R1	3	SHIASPSPCPDRMPLPSPTESR	22	1	A6NF31;O75665-3;O75665	A6NF31	OFD1	Oral-facial-digital syndrome 1 protein	1	SHIAS(0.003)PS(0.014)PCPDRMPLPS(0.799)PT(0.183)ES(0.002)R;SHIAS(0.001)PS(0.008)PCPDRMPLPS(0.706)PT(0.28)ES(0.005)R;SHIASPSPCPDRMPLPS(0.768)PT(0.185)ES(0.047)R	73.649	0.0027681	110583000.0	4296.92	3625.56	4684.41	4848.610000000001	3532.2599999999998	3403.9299999999994	3282.0700000000006	3325.31	3214.31	4946.5599999999995	True	False	4108.032541786731	4224.622166016985	3701.216357250322	4423.539889252662	3996.814103202884	4061.6912974380257	4018.157744744836	3208.3569624963493	3064.87742968265	4050.6900508535773	1.0141562277570633	1.0429388852219774	0.913724898914541	1.0920460054257957	0.9866995630437484	1.0027158944393018	0.9919687002213644	0.7920519521902871	0.7566309421864571	1.0	11.983951982324323	-9.219939496079135	7.2269629790974275	0.8308566732986306	1.0069795065259182	0.48580167700777077	0.07316614046017007	0.17112228871139207	25.59304070017911	0.03316737224888174	0.018816486089536733	6.026435377676805e-10	9.219939496079135	0.1761228332272876	
SHILEDDENS(ph)VDISMLK	ddPTM_K562_Methotrexat_30min_R1	3	SHILEDDENSVDISMLK	17	0	O75717-2;O75717	O75717-2	WDHD1	WD repeat and HMG-box DNA-binding protein 1	1	SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK	136.68	1.2803e-06	62884700.0	12752.1	8633.8	12176.6	14022.0	7568.9	7506.1	7595.5	10210.2	11793.5	16670.1	True	False	12191.532952933396	10060.388700492464	9620.898063084627	12792.713030559442	8564.34301714265	8956.547592841092	9298.984223435025	9851.101478803545	11245.222759149652	13650.98335342828	0.8930882587203243	0.7369717213790257	0.7047769244161047	0.9371275826328442	0.6273792001212731	0.6561100662826435	0.6811951917807956	0.7216404286603689	0.8237664985742986	1.0	13.736717259486934	-10.093857236221135	3.314891871320735	0.9998247838609831	0.7410696093831649	0.4075468820543551	0.09334816353816251	0.3922441232857897	9.675766039424595	0.09179635335505074	0.024351279540808266	8.056432333500203e-11	10.093857236221135	-0.25875517447781815	
SHISDQS(ph)PLSSK	ddPTM_K562_Methotrexat_30min_R1	2	SHISDQSPLSSK	12	0	P42166	P42166	TMPO	Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin	1	SHISDQS(1)PLSSK;SHISDQS(0.922)PLS(0.078)SK	255.08	1.2950999999999995e-73	112718000.0	10641.8	8074.8	14690.3	12571.900000000001	7419.6	7387.700000000001	7196.5	9414.4	9366.8	12254.0	True	False	10173.999214131532	9409.023451867834	11607.00678482763	11469.741046133959	8395.407450222834	8815.26846852988	8810.498316628287	9083.29021586728	8931.33951247746	10034.681856312214	1.0138835849321604	0.9376503995439759	1.1566890660839797	1.1430099339840092	0.8366391252296443	0.8784801147417269	0.8780047482109393	0.9051896558288521	0.8900471026751378	1.0	13.292707257177085	-7.767185493210953	24.999906515931173	0.8913378303889918	1.0605741768666879	0.571313025204349	0.06975678360769146	105.16263527996742	457535.4919646258	0.022545535980615105	0.026251213817555793	1.7092850997295746e-08	7.767185493210953	0.16923634647769603	
SHLVHGSS(ph)PGVMGTSVATSASK	ddPTM_K562_Methotrexat_30min_R1	1	SHLVHGSSPGVMGTSVATSASK	22	0	A0A494C1F2;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A0A0MSW3;H0YF36	A0A494C1F2	NUP214	Nuclear pore complex protein Nup214	1	S(0.001)HLVHGS(0.443)S(0.556)PGVMGTSVATSASK	98.37700000000001	0.00053145	11030000.0	2046.4	1612.7	2880.2	2435.5	1506.9	1386.6	1140.7	1473.2	1961.1	2196.1	True	False	1956.4427062901743	1879.1712637869998	2275.685380261843	2221.983496357691	1705.0837628363777	1654.5408257595084	1396.5310122667804	1421.386720982292	1869.9288890463708	1798.365009355904	1.087900785497871	1.0449331776423059	1.265419071446955	1.2355575674559574	0.9481299702595216	0.9200250322664434	0.7765559299704997	0.7903772112933685	1.0397938568189213	1.0	10.812470155204664	-7.886954848948927	4.960218631808614	0.8892092187079091	1.1569667030481363	0.6056031081106549	0.09709570685486023	0.1450343384811404	5.712619673461017	0.03222429457664051	0.03686179412503463	1.2973141381181214e-08	7.886954848948927	0.26775748434022717	
SHPAMS(ph)PGT(ph)PGPTMGR	ddPTM_K562_Methotrexat_30min_R1	1	SHPAMSPGTPGPTMGR	16	0	A0A3F2YNW7;Q8NFD5;Q8NFD5-2;Q8NFD5-3;A0A1B0GUC6;A0A1B0GUG2;A0A1B0GU09;A0A6I8PTU7	A0A3F2YNW7	ARID1B	AT-rich interactive domain-containing protein 1B	2	SHPAMS(0.995)PGT(0.633)PGPT(0.373)MGR	85.57600000000001	0.0077885	845180.0	205.88	144.64	165.78	261.89	161.23	159.43	110.78	51.693000000000005	245.62	224.08	True	False	196.82976171375145	168.53930154036797	130.98504351774466	238.930510310456	182.4345710280106	190.23759112277412	135.62523497756987	49.874927890128696	234.20117981111107	183.49694062040479	1.0726596369850543	0.9184856214525163	0.7138268522346098	1.3020953346831277	0.9942104234065031	1.0367344026531404	0.7391144207582958	0.27180250374475523	1.2763219867278157	1.0	7.519612199499537	-8.763286286271898	24.987828452835867	0.7611265630096025	1.0019388795608677	0.08199085963143915	0.273632638659918	95.88494732603537	1297242.2591842297	0.10756625780693033	0.07673264015482609	1.724700597129826e-09	8.763286286271898	0.24081231655126523	
SHPAMS(ph)PGTPGPTMGR	ddPTM_K562_Methotrexat_30min_R1	4	SHPAMSPGTPGPTMGR	16	0	A0A3F2YNW7;Q8NFD5;Q8NFD5-2;Q8NFD5-3;A0A1B0GUC6;A0A1B0GUG2;A0A1B0GU09;A0A6I8PTU7	A0A3F2YNW7	ARID1B	AT-rich interactive domain-containing protein 1B	1	S(0.001)HPAMS(0.995)PGT(0.004)PGPTMGR;SHPAMS(0.996)PGT(0.004)PGPTMGR;SHPAMS(0.998)PGT(0.002)PGPTMGR;S(0.001)HPAMS(0.996)PGT(0.003)PGPTMGR	95.751	0.010564	55549000.0	10576.13	8601.880000000001	11259.59	11087.710000000001	8827.18	7846.16	8313.300000000001	8424.85	9725.67	10406.84	True	False	10111.215988700487	10023.194463039692	8896.355930401513	10115.667679080318	9988.108892185299	9362.319375047766	10177.769145504893	8128.543250249561	9273.525724507484	8522.060431658576	1.1864755090375048	1.1761468418839836	1.0439207749985517	1.1869978815805688	1.1720298127763216	1.0985980972709035	1.194285023806629	0.9538237044239749	1.0881788270424946	1.0	13.056986566657569	-9.257264445861992	24.996493598784728	1.015750948048461	1.1481944328981732	0.5755064434674884	0.053950558427284266	256.23709816966357	1534173.9335722856	0.025576838020887567	0.014074575637875408	5.530132718609732e-10	9.257264445861992	0.13244348484971225	
SHPLDLS(ph)PNVQSR	ddPTM_K562_Methotrexat_30min_R1	1	SHPLDLSPNVQSR	13	0	H0YBM4;H0YBF7;A0A0A0MRE5;Q9ULH1;Q9ULH1-2	H0YBM4	ASAP1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1	1	SHPLDLS(0.999)PNVQSR	153.0	5.8349e-30	0.0	966.7	1036.2	1287.9	1159.4	1049.6	1149.3	910.53	911.16	989.23	1209.5	True	False	924.2050254938964	1207.4144376115141	1017.5873901948564	1057.7572020846264	1187.6407973143957	1371.3859592134745	1114.739530638443	879.1139863495954	943.2409132177569	990.4478297053707	0.9331183306937231	1.219059097712077	1.0274013023962696	1.0679585237712907	1.1990947546098254	1.3846120089146157	1.1254904066679063	0.8875924203005282	0.9523378061198271	1.0	9.95193717517968	-9.21552723469885	7.535176949752909	0.9401605939509502	1.1453744102706662	0.35394396096174807	0.11719207080286324	0.2887586422639041	42.33845188815235	0.05847320527633913	0.03334146826298421	6.087973667526194e-10	9.21552723469885	0.20521381631971602	
SHS(ph)DNDRPNCSWNTQYSSAYYTSR	ddPTM_K562_Methotrexat_30min_R1	1	SHSDNDRPNCSWNTQYSSAYYTSR	24	1	O75494-6;O75494-3	O75494-6	SRSF10	Serine/arginine-rich splicing factor 10	1	S(0.257)HS(0.681)DNDRPNCS(0.039)WNT(0.008)QY(0.007)S(0.004)S(0.002)AY(0.002)YTSR	55.718	0.010739	24673000.0	210.94	68.641	256.04	63.338	124.83	120.71	237.18	209.72	176.49	246.38	True	False	201.6673301724243	79.9827585524917	202.3007029936261	57.78525587858895	141.247333011391	144.03549911829683	290.37365257248626	202.34402872957241	168.28501842220905	201.75819452898662	0.9995496373429865	0.3964287980431971	1.0026889042395823	0.2864084703646916	0.700082261050854	0.7139016061010758	1.43921615303099	1.0029036451379507	0.8340926068211396	1.0	7.656483460384324	-8.557851674294582	24.107165506044645	1.0703334534592706	0.6627491514291124	0.3568285283287952	0.25383537188023697	128.73244550927598	88735.04079374569	0.09282267706197467	0.07190051438173799	2.767886807462686e-09	8.557851674294582	-0.40758430203015816	
SHS(ph)GT(ph)SPDNTAPPPPPPRPQPSHSR	ddPTM_K562_Methotrexat_30min_R1	1	SHSGTSPDNTAPPPPPPRPQPSHSR	25	1	Q96D71-3;Q96D71;E9PMG1;H0YDT0;Q96D71-4	Q96D71-3	REPS1	RalBP1-associated Eps domain-containing protein 1	2	S(0.184)HS(0.746)GT(0.571)S(0.489)PDNT(0.01)APPPPPPRPQPSHSR	72.848	0.00057798	14392000.0	520.86	512.21	743.72	835.51	693.94	419.92	592.85	425.72	710.37	826.03	True	False	497.9636180601544	596.8439964186388	587.6233355351491	762.2621355129596	785.2052733311277	501.0635969659117	725.8117038856498	410.7471862996071	677.3450537514003	676.4279626056447	0.7361665182231172	0.8823467233961717	0.8687153222814528	1.12689329485534	1.1608113749562714	0.7407493845106314	1.0730066526075825	0.6072297554308401	1.0013557853850734	1.0	9.401792489792655	-12.228703442294583	21.565705796521137	0.9999999999999989	0.9132816747934627	0.023291986951830213	0.17260303369271177	0.0	0.0	0.16672259580421442	0.04043616898105506	5.906042362285768e-13	12.228703442294583	-0.08671832520653622	
SHS(ph)GTSPDNT(ph)APPPPPPRPQPSHSR	ddPTM_K562_Methotrexat_30min_R1	1	SHSGTSPDNTAPPPPPPRPQPSHSR	25	1	Q96D71-3;Q96D71;E9PMG1;H0YDT0;Q96D71-4	Q96D71-3	REPS1	RalBP1-associated Eps domain-containing protein 1	2	S(0.025)HS(0.618)GT(0.223)S(0.238)PDNT(0.896)APPPPPPRPQPSHSR	68.942	0.004589899999999999	0.0	165.98	222.54	170.34	170.79	247.3	185.68	194.97	175.23	228.23	295.45	True	False	158.68371793884032	259.3109524667692	134.58796183383177	155.81710586858134	279.8242846568692	221.56003211237964	238.69698558924713	169.06706157869044	217.61963711542163	241.94114203096464	0.6558773617697948	1.07179353742813	0.5562838990675122	0.6440289756449906	1.1565799942411454	0.9157600491280787	0.9865911336348809	0.6987941784496187	0.8994734640360165	1.0	7.91851230988658	-7.731740947941536	24.997603090645715	0.9286373944462438	0.743716368209374	0.27646805681997344	0.16573243976665744	332.46633189040745	279840.4853720299	0.05006624500076857	0.06462612131624292	1.8546375652042995e-08	7.731740947941536	-0.1849210262368698	
SHS(ph)GTSPDNTAPPPPPPRPQPSHS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SHSGTSPDNTAPPPPPPRPQPSHSR	25	1	Q96D71-3;Q96D71;E9PMG1;H0YDT0;Q96D71-4	Q96D71-3	REPS1	RalBP1-associated Eps domain-containing protein 1	2	S(0.284)HS(0.369)GT(0.161)S(0.184)PDNT(0.002)APPPPPPRPQPS(0.162)HS(0.838)R	67.181	0.0031406	12931000.0	401.66	430.82	542.72	510.19	473.7	570.51	436.07	564.35	363.32	298.6	True	False	384.0035073341043	502.00568231209456	428.8104887076271	465.46243482107593	535.9998529800197	680.7529831992334	533.869797947905	544.5014906233749	346.42933250131443	244.5206465068408	1.5704338787741643	2.053019609933226	1.7536780424618685	1.903571094999759	2.192043333097536	2.78403068585126	2.1833321871777778	2.226811921209859	1.4167692481200054	1.0	7.933812476446935	-7.579115718931695	5.937752249862112	2.0791920530714667	1.8196722295818606	0.0	0.4761047231691932	0.6354026605729479	46.6543060484007	0.13955814697622257	0.1821242511077678	2.6356290218210872e-08	7.579115718931695	-0.2595198234896061	
SHS(ph)LSRPGPTEGDAEGEAEGPVGSTLGSYATLTR	ddPTM_K562_Methotrexat_30min_R1	1	SHSLSRPGPTEGDAEGEAEGPVGSTLGSYATLTR	34	1	Q8WXE0-2;Q8WXE0	Q8WXE0-2	CASKIN2	Caskin-2	1	S(0.143)HS(0.835)LS(0.011)RPGPT(0.011)EGDAEGEAEGPVGSTLGSYATLTR	55.152	0.0016924	18179000.0	199.89	156.92	363.53	264.53	368.18	71.433	212.6	226.24	246.81	215.56	True	False	191.10307494152786	182.8483628160575	287.2300209313891	241.33906560932036	416.60212343294035	85.23641627468558	260.28096187246206	218.28301096594726	235.33585697085064	176.51999518089278	1.0826143222227644	1.0358507127120617	1.6271812189720705	1.3672052583165029	2.360084606879907	0.48287116814918146	1.474512627341358	1.2365908504713978	1.3331965975281441	1.0	7.4636878028147775														
SHS(ph)PSSPDPDTPSPVGDSR	ddPTM_K562_Methotrexat_30min_R1	3	SHSPSSPDPDTPSPVGDSR	19	0	E9PNJ4;Q13586;G0XQ39;H0YDB2	E9PNJ4	STIM1	Stromal interaction molecule 1	1	S(0.188)HS(0.625)PS(0.137)S(0.049)PDPDTPSPVGDSR;S(0.213)HS(0.669)PS(0.084)S(0.034)PDPDTPSPVGDSR;S(0.16)HS(0.477)PS(0.262)S(0.1)PDPDTPSPVGDSR	83.727	0.0036181999999999994	224450000.0	5650.099999999999	5102.6	7294.0	6668.0	5082.1	5192.4	5376.2	5771.9	5952.8	7311.8	True	False	5401.728369238712	5945.717920629717	5763.089078407709	6083.426792737871	5750.485228688538	6195.757813121071	6581.949704697698	5568.899005455936	5676.055627308774	5987.562167209367	0.9021582103683283	0.9930114718793555	0.9625101030213974	1.016010627172024	0.9604050977843419	1.0347713543672046	1.0992703743008247	0.9300778597262469	0.9479743957220945	1.0	12.547753014694045	-5.127640001706706	1.1285837166889936	0.9981430093621674	2.6695213351441163e-10	0.2542783549720191	0.04661988016057084	27.480121027556333	3.860689752788797	0.014834518185875972	58.0279978088963	7.453495580568496e-06	5.127640001706706	-0.9981430090952153	
SHS(ph)SPSLHQDEAPTTAK	ddPTM_K562_Methotrexat_30min_R1	3	SHSSPSLHQDEAPTTAK	17	0	Q8NDX1-2;Q8NDX1	Q8NDX1-2	PSD4	PH and SEC7 domain-containing protein 4	1	S(0.173)HS(0.524)S(0.131)PS(0.173)LHQDEAPTTAK;S(0.138)HS(0.552)S(0.138)PS(0.172)LHQDEAPTTAK;S(0.027)HS(0.667)S(0.153)PS(0.153)LHQDEAPTTAK	118.23	0.00010579	25822700.0	5722.4	4118.7	7315.700000000001	6011.8	3742.8	4417.5	4190.2	4471.6	5346.4	7062.6	True	False	5470.8501478082935	4799.245169070202	5780.2345449557515	5484.75482792164	4235.043803533078	5271.119355107914	5129.959014289705	4314.331293472994	5097.847030950755	5783.494702006742	0.9459419312530938	0.8298175093693735	0.9994362998119702	0.9483461316249765	0.7322637992671824	0.9114073110984185	0.8869998640285301	0.7459730691853177	0.8814475146284679	1.0	12.497725795672814														
SHSESASPSALSSSPNNLS(ph)PTGWSQPK	ddPTM_K562_Methotrexat_30min_R1	1	SHSESASPSALSSSPNNLSPTGWSQPK	27	0	H7C155;P04049;P04049-2	H7C155	RAF1	RAF proto-oncogene serine/threonine-protein kinase	1	SHSESASPSALSSSPNNLS(0.956)PT(0.044)GWSQPK	166.98	1.0109999999999998e-34	9961000.0	1591.2	1171.4	2149.1	1630.1	1234.5	918.63	960.1	1551.3	1301.3	1732.5	True	False	1521.2527532490835	1364.9539396044456	1698.0332791891963	1487.1916638935215	1396.8583882284881	1096.1422463345284	1175.42686497531	1496.7398997147886	1240.8028470328104	1418.7274617317528	1.0722656706681244	0.9620973558503836	1.196870664022047	1.04825747298794	0.9845854301878597	0.7726235488502742	0.8285078682698784	1.0549876139620298	0.8745885876616776	1.0	10.470381758224331	-7.9177319922375125	3.725026241462854	0.9025196596549541	1.0708671277260386	0.40932147911100847	0.09210923094525073	0.23576450535445473	6.428267251358587	0.030594717116918444	0.03483886824630985	1.2085594199528425e-08	7.9177319922375125	0.16834746807108458	
SHSGT(ph)SPDNTAPPPPPPRPQPSHSR	ddPTM_K562_Methotrexat_30min_R1	2	SHSGTSPDNTAPPPPPPRPQPSHSR	25	1	Q96D71-3;Q96D71;E9PMG1;H0YDT0;Q96D71-4	Q96D71-3	REPS1	RalBP1-associated Eps domain-containing protein 1	1	S(0.098)HS(0.098)GT(0.401)S(0.401)PDNT(0.001)APPPPPPRPQPSHSR;S(0.221)HS(0.221)GT(0.279)S(0.279)PDNTAPPPPPPRPQPSHSR	102.72	5.728499999999999e-07	88036000.0	1463.51	1462.21	2047.82	1871.3899999999999	1429.69	1706.29	1332.41	1565.47	1713.48	1662.9899999999998	True	False	1399.1758527573934	1703.8153491796293	1618.0105671161039	1707.3281442204136	1617.719294504972	2036.0063937582527	1631.2368598705891	1510.4115327831578	1633.8206887987235	1361.8063962974238	1.0274410933606806	1.2511435941350282	1.1881355319781624	1.2537231054740372	1.1879216450321737	1.4950777139055096	1.1978478470256213	1.1091235412682539	1.19974520110999	1.0	10.411305899205132	-10.195734308732389	1.0923346215270366	1.0040646352244966	1.2308316581446619	0.24453084064492758	0.11335751980810697	1.1109352602744555	2.6724963174471235	0.11014224684003865	0.03507812205521316	6.371852167947619e-11	10.195734308732389	0.22676702292016526	
SHSPMS(ph)NRRRHTGSR	ddPTM_K562_Methotrexat_30min_R1	1	SHSPMSNRRRHTGSR	15	3	Q13595	Q13595	TRA2A	Transformer-2 protein homolog alpha	1	S(0.004)HS(0.026)PMS(0.968)NRRRHT(0.001)GSR	60.102	0.027777	37612000.0	2800.7	2976.4	3877.0	3591.8	3222.3	3104.3	2590.1	2492.3	2460.0	2761.2	True	False	2677.584581463491	3468.1995098503257	3063.2706823398253	3276.9124706292537	3646.0889302459777	3704.1620405345784	3170.9958576945633	2404.644396350913	2345.6351369405297	2261.1199234249452	1.1841851260183147	1.5338414711754884	1.354758166784826	1.4492431103192773	1.612514618297292	1.6381979576403185	1.402400564801277	1.0634749494881146	1.0373775900340432	1.0	11.142821795257639	-9.242296503213604	3.829004569848165	1.0279465891675625	1.4702592452958088	0.7139202997594654	0.12234173756346917	0.12389428800001263	4.0942180874927985	0.06958350134195557	0.03491854648946016	5.724051029204431e-10	9.242296503213604	0.4423126561282462	
SHSSPS(ph)LHQDEAPTTAK	ddPTM_K562_Methotrexat_30min_R1	1	SHSSPSLHQDEAPTTAK	17	0	Q8NDX1-2;Q8NDX1	Q8NDX1-2	PSD4	PH and SEC7 domain-containing protein 4	1	S(0.019)HS(0.393)S(0.094)PS(0.494)LHQDEAPTTAK	98.56200000000001	0.001426	16874000.0	1849.2	1423.4	2466.2	1896.9	1445.9	1223.9	1282.4	1100.6	1493.7	2509.4	True	False	1767.9113821695596	1658.5926563368353	1948.578322617095	1730.6017221272436	1636.0611936327025	1460.4013534163162	1570.0108443332333	1061.8912741739807	1424.2582130276703	2054.923343416832	0.8603296019937942	0.8071311573009842	0.9482486676982746	0.8421733723894921	0.7961665328655693	0.710684103178286	0.7640240446744313	0.5167546894514892	0.6930955442160093	1.0	11.004868861471664	-8.037423812259465	1.9592180937274686	0.7054944797294768	0.8683031410814406	0.1878383692273483	0.11681327706269722	0.44403457981401595	3.413090594214146	0.04254791325457828	0.04552733716420128	9.174368660812113e-09	8.037423812259465	0.1628086613519638	
SHTEEDCTEELFDFLHAR	ddPTM_K562_Methotrexat_30min_R1	4	SHTEEDCTEELFDFLHAR	18	0	P07919	P07919	UQCRH	Cytochrome b-c1 complex subunit 6, mitochondrial	0	;;;	176.42	3.1185e-12	49869000.0	5679.8	3841.7599999999998	5838.2	6246.4	4706.12	4706.400000000001	4462.88	5251.7	6383.2	7401.0	False	True	5430.122792800488	4476.54554124533	4612.84160372359	5698.787810161637	5325.057268537752	5615.845191370655	5463.794445537974	5066.994734308102	6086.446425251546	6060.607182843694	0.8959700949060063	0.7386298775339689	0.76111872367864	0.9402998145620967	0.8786342866127127	0.9266142849957233	0.9015259165789243	0.8360539763493829	1.0042634742078314	1.0	12.565246622221034	-8.040741363760963	0.2205646914980634	1.0175683917367289	0.7279802488112855	0.42089726209877953	0.06445053179203797	5.197559883248623	0.5195440290810359	0.16186125156880868	0.4555238241438894	9.104553164426644e-09	8.040741363760963	-0.2895881429254433	
SHTPSFTSCS(ph)SSHSPPGPSR	ddPTM_K562_Methotrexat_30min_R1	1	SHTPSFTSCSSSHSPPGPSR	20	0	Q5T481	Q5T481	RBM20	RNA-binding protein 20	1	SHTPSFT(0.031)S(0.031)CS(0.528)S(0.017)S(0.05)HS(0.331)PPGPS(0.013)R	153.25	6.2798e-16	25498000.0	4051.5	3352.9	4641.6	4124.1	3686.0	2866.6	3285.1	3374.6	3804.0	4505.1	True	False	3873.4009111291216	3906.9097354445516	3667.391591217058	3762.546556078319	4170.773607946706	3420.529879649652	4021.867299375472	3255.9134052585136	3627.1528702934065	3689.18273468844	1.049934684641269	1.0590176785521845	0.994093232827291	1.0198861988320767	1.1305413442196803	0.9271782195789018	1.0901783914249854	0.8825568261078515	0.9831860146661258	1.0	11.849085535852465	-9.256105332013737	24.99995484339893	0.9496535655841344	1.036277149914664	0.2950874117844545	0.0588274018064834	506.84975479576246	2375548.3593098684	0.027037267895576547	0.01502839197115809	5.544912126090284e-10	9.256105332013737	0.08662358433052952	
SHTPSFTSCSSS(ph)HSPPGPSR	ddPTM_K562_Methotrexat_30min_R1	2	SHTPSFTSCSSSHSPPGPSR	20	0	Q5T481	Q5T481	RBM20	RNA-binding protein 20	1	SHTPSFT(0.001)S(0.234)CS(0.002)S(0.178)S(0.576)HS(0.009)PPGPSR;SHTPSFT(0.001)S(0.001)CS(0.131)S(0.079)S(0.781)HS(0.007)PPGPSR	131.64	1.0092e-07	21157000.0	2951.6	2226.6	3191.3	3084.1	2301.2	2105.2	2219.3	2737.6	2946.5	3139.8	True	False	2821.8511981460492	2594.5078042711784	2521.4897416948875	2813.7217413741537	2603.8481352704716	2512.0001055740054	2717.0345187373255	2641.31705631355	2809.51785812816	2571.151794715935	1.0975047074020816	1.0090838703507288	0.9806849003924585	1.0943429116696777	1.0127166123064892	0.9769940890835406	1.0567382774992902	1.0272894279294649	1.092707892199169	1.0	11.328199070648264														
SHTPSFTSCSSSHS(ph)PPGPSR	ddPTM_K562_Methotrexat_30min_R1	1	SHTPSFTSCSSSHSPPGPSR	20	0	Q5T481	Q5T481	RBM20	RNA-binding protein 20	1	SHTPSFTSCS(0.001)S(0.025)S(0.082)HS(0.883)PPGPS(0.008)R	151.0	1.2383e-13	29206000.0	2196.7	2168.2	3388.5	2752.3	2618.9	2348.8	2588.7	2644.2	2775.4	3214.2	True	False	2100.1356982543102	2526.4581969014525	2677.3001565923373	2511.0101322214196	2963.331253893549	2802.6723579575455	3169.281872056643	2551.2019872531714	2646.372259782419	2632.077233765194	0.7979004838129542	0.9598723641127153	1.0171814573854476	0.9540032108516103	1.125852697587637	1.0648138747616895	1.2040991166216564	0.969273224404464	1.0054310815176104	1.0	11.361986107753188	-5.388266637065576	0.7997204710276847	1.059268892714275	1.3265024704050941e-08	0.5393195548080347	0.07006642817328426	6.865275634627968	1.2103959237558743	0.026152516548897376	8.958438497749777	4.0900946941063006e-06	5.388266637065576	-1.0592688794492504	
SHTSSNY(ph)DS(ph)Y(ph)KK	ddPTM_K562_Methotrexat_30min_R1	1	SHTSSNYDSYKK	12	1	Q9NYV4-2;J3QSD7;Q9NYV4-3;Q9NYV4	Q9NYV4-2	CDK12	Cyclin-dependent kinase 12	3	S(0.004)HT(0.001)S(0.005)S(0.295)NY(0.847)DS(0.884)Y(0.964)KK	56.431999999999995	0.030717	0.0	128.71	0.0	0.0	168.12	0.0	0.0	74.404	241.32	71.71300000000001	284.41	True	False	123.05206251300247	0.0	0.0	153.38118062313896	0.0	0.0	91.09099100262779	232.83263881852193	68.37907828268955	232.900593010752	0.5283458531482644	0.0	0.0	0.6585693004914677	0.0	0.0	0.3911153244612929	0.9997082266242794	0.29359769933918883	1.0	7.863570502713722	-9.036518843783988	6.545540575727818	0.7308869461694699	0.1914828944383131	0.4393278299523261	0.28539496218853594	0.197503347067999	25.529223654802156	0.12863571248528707	0.07587962254264824	9.193505838535353e-10	9.036518843783988	-0.5394040517311568	
SHVEDGDIAGAPAS(ph)SPEAPPAEQDPVQLK	ddPTM_K562_Methotrexat_30min_R1	1	SHVEDGDIAGAPASSPEAPPAEQDPVQLK	29	0	A0A087WU26;F8W7S5;A0A087WVV2;Q9P2E9-3;Q9P2E9	A0A087WU26	RRBP1	Ribosome-binding protein 1	1	SHVEDGDIAGAPAS(0.949)S(0.051)PEAPPAEQDPVQLK	95.361	2.1356e-06	15465000.0	1565.8	1089.8	2202.3	1535.2	1221.5	1003.3	999.78	1306.5	1263.6	2089.5	True	False	1496.969306835982	1269.8709265672912	1740.067326210212	1400.611399551765	1382.1486603654098	1197.1735255189058	1224.0061150557394	1260.5496544687505	1204.8555118040877	1711.0713023310238	0.8748725461040888	0.7421496256978437	1.016946122490446	0.8185581732588738	0.8077680097155994	0.6996631431361009	0.7153448914655125	0.7367020022786196	0.7041527200898589	1.0	10.740684164522165	-7.8257284088066505	2.7298087977335035	0.7521971530213569	0.8685647106666556	0.13651242269964314	0.10410021466431671	0.4295374556304085	6.521093290443938	0.03276037136655875	0.03957944638164133	1.4937282381875054e-08	7.8257284088066505	0.11636755764529871	
SHVSSEPYEPIS(ph)PPQVPVVHEK	ddPTM_K562_Methotrexat_30min_R1	1	SHVSSEPYEPISPPQVPVVHEK	22	0	E7EVK1;A0A088AWL3;O75376-2;O75376;J3KS29;J3QKP0	E7EVK1	NCOR1	Nuclear receptor corepressor 1	1	SHVSSEPYEPIS(1)PPQVPVVHEK	171.32	6.1354999999999994e-18	21191000.0	2791.3	2060.7	3570.5	2717.7	2140.5	2150.3	1964.2	2917.0	2539.2	3240.6	True	False	2668.5977942082486	2401.195649089023	2821.1008437694986	2479.4434605014553	2422.0132685322615	2565.8150422837675	2404.721849999483	2814.4074566286595	2421.153146227395	2653.6959379439663	1.0056155100707687	0.9048495778116253	1.063083680172957	0.9343359293915494	0.9126943422194751	0.9668835851147712	0.9061783664117209	1.0605613915244598	0.9123702198162382	1.0	11.37378735998554	-12.318941924973307	3.9416516386112854	1.000076124619626	0.9631854317702063	0.035151568626994534	0.05821720750147921	3.674257680942381e-05	6.348496410877848e-06	0.05318008681093613	0.012871454802356722	4.797976041737076e-13	12.318941924973307	-0.03689069284941959	
SHVTEEEEEEEEEES(ph)DS	ddPTM_K562_Methotrexat_30min_R1	1	SHVTEEEEEEEEEESDS	17	0	O75971-2;O75971	O75971-2	SNAPC5	snRNA-activating protein complex subunit 5	1	SHVTEEEEEEEEEES(0.629)DS(0.371)	175.88	1.7622e-07	16353000.0	1690.6	1309.4	2487.3	1947.9	1379.2	1284.0	1329.6	1527.1	1545.9	1840.7	True	False	1616.2832482672818	1525.756094005516	1965.249720965655	1777.130631309852	1560.58897451983	1532.1148278344215	1627.796645840195	1473.39102743148	1474.0314464212865	1507.3313932523156	1.0722812883103858	1.0122233908453575	1.303794062648231	1.178991321527113	1.0353323638756056	1.016441928226965	1.079919553939599	0.9774831427430145	0.9779080121464339	1.0	10.557780919143775	-7.850058349037972	5.695029799310049	1.014966481526267	1.1437578616964155	0.4087306640497985	0.0752552511621822	0.23230453692098918	11.767604813011818	0.025333735416310513	0.029009629788886965	1.4123477778313654e-08	7.850058349037972	0.12879138017014857	
SHWDDS(ph)TSDS(ph)ELEK	ddPTM_K562_Methotrexat_30min_R1	1	SHWDDSTSDSELEK	14	0	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	2	S(0.001)HWDDS(0.491)T(0.21)S(0.301)DS(0.996)ELEK	133.48	0.00041747	5107800.0	5585.8	3616.8	6888.6	4671.8	3293.9	3129.4	2827.9	4199.8	4808.8	6583.2	True	False	5340.254920248069	4214.414724911526	5442.776998288909	4262.230547437427	3727.105585245701	3734.1122602998744	3462.1285610495543	4052.0906535306985	4585.239937609603	5390.91868748772	0.9906020160613365	0.7817618794164248	1.0096195683532665	0.7906315777550181	0.6913674275771	0.6926671457625061	0.6422149473493503	0.7516512283770055	0.8505488959148854	1.0	12.396315433881826	-7.455999361236589	6.983644987136976	0.7478569441813336	0.9118852211244077	0.2681395804003198	0.11146245207905119	0.3087145333361674	27.505261919372394	0.03038064469158792	0.044959239490669115	3.4994568173057465e-08	7.455999361236589	0.1640282769430741	
SHWDDSTS(ph)DSELEKGAR	ddPTM_K562_Methotrexat_30min_R1	2	SHWDDSTSDSELEKGAR	17	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	SHWDDS(0.077)T(0.249)S(0.664)DS(0.01)ELEKGAR;SHWDDS(0.188)T(0.159)S(0.653)DSELEKGAR	70.837	0.023247999999999998	64079000.0	3273.6	2091.55	4523.7	4285.3	2153.2	2201.8999999999996	2192.29	2766.1	2841.9	4834.0	True	False	3129.6964636979615	2437.1430872286833	3574.2371900182256	3909.6144023574657	2436.3835411369632	2627.386012000476	2683.9668386800563	2668.8146951595963	2709.780689297275	3958.5157575822745	0.790623722465481	0.6156709323590533	0.902923572597131	0.9876465427398788	0.6154790558734626	0.6637300879674136	0.6780235328201222	0.6741957992835216	0.6845446261283334	1.0	11.950743878965337	-5.932078180748909	14.58312835485091	0.746909914779374	1.2178911776999048	0.0	0.14201679786662633	2585434.053217531	13066600.902722863	0.03605329100002085	36223897.457228795	1.1692888792293316e-06	5.932078180748909	0.4709812629205309	
SHYTMEFGYSSNS(ph)PSTHR	ddPTM_K562_Methotrexat_30min_R1	1	SHYTMEFGYSSNSPSTHR	18	0	H0YGW5;F5H7J9;O75581	H0YGW5	LRP6	Low-density lipoprotein receptor-related protein 6	1	SHYT(0.014)MEFGYS(0.009)S(0.128)NS(0.831)PS(0.007)T(0.011)HR	125.35	0.00050022	6906300.0	1003.3	855.68	1067.0	936.15	758.18	841.52	944.96	964.46	968.17	1168.3	True	False	959.1961333174991	997.0665759268675	843.0512814177438	854.0791829666404	857.8939593252936	1004.1318301551579	1156.8913345766784	930.5393951388683	923.1599880210215	956.7095489415339	1.0025991006138868	1.042183154782957	0.8811987738080621	0.8927256803400366	0.8967130727130653	1.0495681069203189	1.209239874167262	0.9726456646830596	0.9649323444533084	1.0	9.901937187732596	-8.27782110145483	23.622174318901052	1.0481902407391037	0.9423537226093543	0.26583797746131943	0.07923471839621746	564.5207723299185	814025.9090976326	0.030190144601962118	0.026715966494339185	5.274470874952001e-09	8.27782110145483	-0.10583651812974937	
SIAS(ph)HVR	ddPTM_K562_Methotrexat_30min_R1	1	SIASHVR	7	0	A0A0A0MSJ0;Q86XP3-2;Q86XP3	A0A0A0MSJ0	DDX42	ATP-dependent RNA helicase DDX42	1	SIAS(1)HVR	101.6	0.010582	6387700.0	1884.0	1844.1	1751.6	1965.4	2009.9	2028.9	1594.6	2084.6	1776.9	2116.6	True	False	1801.1816158379047	2148.8061806595174	1383.9630970302894	1793.0964334803555	2274.2370793847213	2420.9562104308857	1952.229641589031	2011.283436437473	1694.2923068413124	1733.2632297266546	1.0391852691191985	1.2397460142268155	0.7984725420203763	1.0345205521743728	1.3121129210958806	1.3967619972026315	1.1263318854903006	1.1604027604939522	0.9775158659014026	1.0	10.75927505709601	-5.970461644274133	16.452473043219033	1.124856961090501	0.7770018692839364	0.016656653543635325	0.16596639205300248	17649141.800082967	265347661.96262196	0.044048976460321264	170586290.8869071	1.070380911913365e-06	5.970461644274133	-0.3478550918065646	
SIDAVIATASAPPS(ph)SSPGR	ddPTM_K562_Methotrexat_30min_R1	1	SIDAVIATASAPPSSSPGR	19	0	Q9NR48-2;Q9NR48	Q9NR48-2	ASH1L	Histone-lysine N-methyltransferase ASH1L	1	SIDAVIAT(0.001)AS(0.006)APPS(0.331)S(0.331)S(0.331)PGR	89.311	0.0030906999999999996	10966000.0	2160.2	2339.5	2540.7	2447.7	2143.7	2052.7	1775.0	2434.3	2412.1	2679.9	True	False	2065.240194550445	2726.062610299301	2007.4417907198324	2233.113941299411	2425.6341246216357	2449.3552235947955	2173.088933789371	2348.6842892256263	2299.9619974854686	2194.544141238052	0.9410793593722565	1.2421999444319187	0.9147420427767446	1.0175753129484104	1.1053020438464338	1.1161111674942168	0.990223387606787	1.0702378890864397	1.0480363344106376	1.0	11.099705573636028	-11.598258012610458	0.9270379087067226	0.9973410007970481	1.0529929624048342	0.02571464073720997	0.08925618272834726	171.1890968209889	86.06305758503986	1.7102720153430995	0.02684717791308382	2.521982027914325e-12	11.598258012610458	0.05565196160778607	
SIEAVHEDIR	ddPTM_K562_Methotrexat_30min_R1	1	SIEAVHEDIR	10	0	H7C312;H7BZ20;P23919-2;P23919	H7C312	DTYMK	Thymidylate kinase	0		104.82	0.0059968999999999995	7053300.0	2157.6	2483.4	3056.7	2769.0	2639.0	2780.2	2330.8	2814.0	2946.9	3504.7	False	True	2062.754487437292	2893.7396394175207	2415.1404422770534	2526.2460691498427	2986.074756204926	3317.4343024495784	2853.5412320429687	2715.0300250096184	2809.899262215467	2869.964868762639	0.7187385845341832	1.0082839936173615	0.8415226501773594	0.8802358860368253	1.0404569020011547	1.155914603191593	0.9942774084455078	0.9460150730626122	0.9790709610417395	1.0	11.486817361642448	-7.748171906723597	12.134141645292521	1.0221758136666095	0.8711058082791187	0.4562799248569114	0.08375013399461002	0.5586756248248921	503.9603147700767	0.025353701338257033	0.03193576973885515	1.7857805696630562e-08	7.748171906723597	-0.15107000538749082	
SIFAS(ph)PESVTGK	ddPTM_K562_Methotrexat_30min_R1	1	SIFASPESVTGK	12	0	O75940	O75940	SMNDC1	Survival of motor neuron-related-splicing factor 30	1	SIFAS(0.818)PES(0.18)VT(0.002)GK	94.68799999999999	0.01277	7610200.0	1053.4	926.79	1453.4	1068.3	980.37	757.97	628.53	1287.3	889.18	1349.6	True	False	1007.0937973055452	1079.926294763534	1148.3512018861747	974.6437976427509	1109.3058388558622	904.4369751196706	769.4938521434551	1242.0249293514141	847.8422158799923	1105.1743621086139	0.9112533115444913	0.9771546751257351	1.0390678984763833	0.8818914291344783	1.0037383031030196	0.8183658670782527	0.696264660605501	1.1238271280395038	0.7671569708352214	1.0	10.110058284599958	-8.253798760602766	24.731521071831597	0.8773084786575798	0.9631906023426664	0.10486034246752574	0.11879083432248724	1199.7313155783763	3883352.352705739	0.03866881813266699	0.03795654084957097	5.574439923849492e-09	8.253798760602766	0.08588212368508663	
SILPYPVS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	SILPYPVSPK	10	0	Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4	Q8IWI9-3	MGA	MAX gene-associated protein	1	SILPYPVS(1)PK;SILPYPVS(1)PK	113.07	0.0026881	78053000.0	12725.0	9354.599999999999	18404.300000000003	13921.2	9115.6	8271.7	8131.5	11114.4	11300.9	14398.3	True	False	12165.624236484786	10900.288648987318	14541.488939640658	12700.750010057342	10314.461177590605	9870.088957475067	9955.195867666629	10723.500252298114	10775.523625630585	11790.628347620368	1.0318045720557463	0.9244875105564038	1.233309074878565	1.0771902595522536	0.8748016537788939	0.8371130584797958	0.8443312412332823	0.9094935347073656	0.9139057994144429	1.0	13.525352984197948	-7.760877425199198	24.99993617989657	0.8864936684469038	1.0684408007372383	0.5035419958817173	0.08236491734527432	12.319235350501792	548034.4386279634	0.02564188657421317	0.031130244966412694	1.7342934137659335e-08	7.760877425199198	0.18194713229033455	
SILVS(ph)PTGPSR	ddPTM_K562_Methotrexat_30min_R1	1	SILVSPTGPSR	11	0	Q14684-2;Q14684	Q14684-2	RRP1B	Ribosomal RNA processing protein 1 homolog B	1	S(0.07)ILVS(0.856)PT(0.073)GPSR	103.46	0.013705000000000002	0.0	2026.0	1556.5	1879.6	1863.3	1662.5	1383.8	1437.3	1875.2	1549.8	1684.3	True	False	1936.9394658639017	1813.6851690236633	1485.097646253787	1699.9473819598782	1881.1478901821474	1651.1997653872852	1759.651112414346	1809.2481531265212	1477.7501362725343	1379.2569487993032	1.4043354775555654	1.3149726529219568	1.0767374763249313	1.2325095649797149	1.3638850192632779	1.1971661747470033	1.2757964452861308	1.3117556918611446	1.0714103253632132	1.0	10.429675533556543	-9.881266931383493	4.457241292892601	1.0038467795129262	1.2661252461708759	0.5459526011990945	0.08699451632537705	0.16045660379105853	5.039513201592451	0.0864002540616875	0.022728933079854702	1.3144167010051075e-10	9.881266931383493	0.2622784666579496	
SILVSPT(ph)GPSR	ddPTM_K562_Methotrexat_30min_R1	1	SILVSPTGPSR	11	0	Q14684-2;Q14684	Q14684-2	RRP1B	Ribosomal RNA processing protein 1 homolog B	1	SILVS(0.208)PT(0.791)GPS(0.001)R	116.74	3.0663e-05	0.0	1923.9	1527.4	1932.1	1827.9	1521.0	1592.9	1387.1	1664.8	1704.4	1822.8	True	False	1839.327659612815	1779.7768886390904	1526.5786137087364	1667.6508449978328	1721.0381599801792	1900.7053810416282	1698.1924845404144	1606.2480403823781	1625.1628160168452	1492.673256706862	1.2322372973109617	1.192341914509567	1.0227145203074626	1.1172243071313588	1.1529905505087805	1.2733566254378854	1.1376853419930422	1.0760881747999458	1.0887599203071956	1.0	10.543682681535632	-9.75206530396445	1.3518464763517815	1.010261409195663	1.1584063949496906	0.3742261680865424	0.0655453075993217	0.487122918274248	1.7929679348533263	0.06681552783638461	0.021014615623408162	1.76984281069907e-10	9.75206530396445	0.14814498575402757	
SILYDER	ddPTM_K562_Methotrexat_30min_R1	1	SILYDER	7	0	P25787;A0A024RA52	P25787	PSMA2	Proteasome subunit alpha type-2;Proteasome subunit alpha type	0		94.262	0.0062103	0.0	2082.0	1909.7	2610.4	2971.9	2250.6	1792.4	1954.1	2307.0	2493.7	2315.6	False	True	1990.4777729164089	2225.2454656501714	2062.512713226689	2711.3581411724167	2546.5933483572585	2138.7559325626303	2392.3566678973566	2225.8615023799525	2377.7684312961796	1896.222401377227	1.0497069180654781	1.1735150180875276	1.0876955739625718	1.429873489102943	1.3429824194185591	1.1279035259836878	1.261643500340354	1.173839893866515	1.2539501851519135	1.0	10.888912467541271	-13.298846826860732	2.1756447670245485	0.040420552481406594	1.214728974965988	0.24905162850486318	0.10988827034995542	2347963.5588184316	492094.416893913	10990636.550610421	0.02871865273489486	5.025197940813292e-14	13.298846826860732	1.1743084224845814	
SIPAGAEPGEKGS(ph)AR	ddPTM_K562_Methotrexat_30min_R1	2	SIPAGAEPGEKGSAR	15	1	H3BU16;A6NGP5;Q9H910-2;Q9H910;Q9H910-3	H3BU16	HN1L	Hematological and neurological expressed 1-like protein	1	SIPAGAEPGEKGS(1)AR;SIPAGAEPGEKGS(1)AR	117.27	0.00067106	26355000.0	3809.3	2967.0	4295.1	4225.8	2828.1000000000004	2766.9	2830.8	3662.2	4024.8	5367.700000000001	True	False	3641.8477331270296	3457.2463196230065	3393.6172060143867	3855.3306749777585	3200.0447207363195	3301.5642656815107	3465.6789598709597	3533.3983502452807	3837.687926487095	4395.55751592354	0.8285291956558211	0.7865319261774265	0.7720561484454519	0.8770970829095667	0.7280179383715709	0.7511138811677741	0.7884503722943081	0.8038566979148916	0.8730833148205928	1.0	12.101830447629663	-10.078493525033922	1.881418845428458	0.9996793261699775	0.7888429322267294	0.7373677094647464	0.03849505831190149	0.21994336843134443	1.7082284043747018	0.03741066819521026	0.010539980119263355	8.346539921747816e-11	10.078493525033922	-0.21083639394324805	
SIQDLTVTGTEPGQVS(ph)SR	ddPTM_K562_Methotrexat_30min_R1	1	SIQDLTVTGTEPGQVSSR	18	0	Q9UG54;O43318-4;O43318-2;O43318-3;O43318	Q9UG54	DKFZp586F0420;MAP3K7	Mitogen-activated protein kinase kinase kinase 7	1	SIQDLTVT(0.002)GT(0.014)EPGQVS(0.646)S(0.339)R	127.01	2.2225e-05	19325000.0	1912.6	1578.8	1886.4	2387.7	1921.9	1558.4	1765.8	1995.0	1944.8	2181.4	True	False	1828.5243940825756	1839.669864988474	1490.4704191812857	2178.3740481434033	2174.663536926959	1859.5387443124325	2161.8255995973373	1924.834719223236	1854.3866724885952	1786.3273218018157	1.0236222509535358	1.029861572700379	0.834376992945443	1.2194708223720956	1.217393649184876	1.0409843266780303	1.2102068715025684	1.0775375239078313	1.0381001565928747	1.0	10.802780744893308	-7.270372959550176	24.998346258487054	1.1232167648271203	0.9693443986316308	0.3698509508624578	0.09044446845743766	664.9244908063575	1860619.5285503764	0.02541236900467903	0.038325290879579664	5.3657080695399195e-08	7.270372959550176	-0.1538723661954895	
SIQDLTVTGTEPGQVSS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SIQDLTVTGTEPGQVSSR	18	0	Q9UG54;O43318-4;O43318-2;O43318-3;O43318	Q9UG54	DKFZp586F0420;MAP3K7	Mitogen-activated protein kinase kinase kinase 7	1	SIQDLTVTGTEPGQVS(0.243)S(0.757)R	141.74	4.6706e-09	21118000.0	2387.3	1641.3	2300.7	2258.2	1691.5	1807.1	1895.1	1868.5	2163.4	2021.1	True	False	2282.3571504723086	1912.49692767012	1817.8145109257753	2060.2271120816818	1913.9618984920924	2156.296499516809	2320.1244160136534	1802.7837959241185	2062.824006202092	1655.0592051405754	1.379018432321551	1.1555459295534256	1.0983380565962146	1.2448056877256501	1.156431076633012	1.3028515794597573	1.401837716020914	1.0892563784574678	1.2463747519091815	1.0	10.69266711102083	-10.753592360158654	1.1368626980166503	0.9996527367732436	1.2293023156545526	0.3100539657275	0.10289153446034172	6.236736266186679	8.24516827594589	0.1075029287254759	0.03086542555683055	1.763630658330661e-11	10.753592360158654	0.229649578881309	
SIQEAPVS(ph)EDLVIR	ddPTM_K562_Methotrexat_30min_R1	1	SIQEAPVSEDLVIR	14	0	A0A0A0MSK5;Q5JTV8;H0YDU3;H0YD16	A0A0A0MSK5	TOR1AIP1	Torsin-1A-interacting protein 1	1	SIQEAPVS(1)EDLVIR	109.42	0.0062380000000000005	0.0	1170.1	587.18	540.79	918.91	715.28	610.55	690.5	691.1	583.35	700.63	True	False	1118.6638050381805	684.2015146465241	427.28556933261643	838.3505869998128	809.3518573771349	728.5301465220452	845.3622021304562	666.7936212807914	556.2301858269345	573.7391177564898	1.949777817856532	1.1925307051085847	0.7447384292070666	1.4612052081755234	1.4106618013810337	1.2697934025674242	1.4734261199342704	1.162189574746403	0.9694827642256275	1.0	9.164251074627732	-3.000000000000024	0.08313210409070053	0.7899208546945907	2.5502034384605228	0.19195911872495974	0.2865428651443749	406.79733492688786	2.460430946126277	7.515149092819994	82.01029124953887	0.0009999999999999447	3.000000000000024	1.7602825837659322	
SIQPQVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	3	SIQPQVSPR	9	0	A0A2R8YCL1;Q13322-3;Q13322-2;Q13322-4;Q13322	A0A2R8YCL1	GRB10	Growth factor receptor-bound protein 10	1	SIQPQVS(1)PR;SIQPQVS(1)PR;SIQPQVS(1)PR	133.91	0.0005702000000000001	356521000.0	6370.299999999999	5715.18	7405.4	6398.9	5993.8	5727.4	5732.8	6933.6	6182.8	7740.499999999999	True	False	6090.269239581845	6659.516353550057	5851.1077407787825	5837.918371933163	6782.089758901507	6834.138991385407	7018.526332184624	6689.741357998107	5895.362977510534	6338.620443021437	0.9608193603526117	1.0506255128246262	0.9230885164011696	0.9210077215398619	1.069963065286282	1.0781745101821827	1.1072640167170344	1.0553939012649416	0.9300703568709637	1.0	12.62995316657547	-7.77222442867248	24.999866619505134	1.0481715055670793	0.967166950880321	0.29539516254471276	0.05680381441114123	269.85808112242313	625532.2464018981	0.018406499192393823	0.021076057934785983	1.6895675947241088e-08	7.77222442867248	-0.08100455468675827	
SIRDTPAK	ddPTM_K562_Methotrexat_30min_R1	1	SIRDTPAK	8	1	P06748;P06748-3	P06748	NPM1	Nucleophosmin	0		70.908	0.028405	0.0	1681.2	1678.0	2496.5	2727.1	1942.6	1588.3	1923.3	1825.5	2009.4	2830.2	False	True	1607.29646101204	1955.2609788767813	1972.5187666910942	2488.019377095898	2198.0859497550905	1895.2164961444014	2354.648983863154	1761.2961302967508	1915.9834325887402	2317.623354801273	0.6935106421335918	0.8436491524070084	0.8510954821907333	1.0735218783248912	0.9484224195452017	0.8177413695017364	1.0159756886230793	0.7599578795441397	0.8267018144339628	1.0	11.178430412563145	-6.310915108245512	1.8413969098992864	0.9110136580575431	0.6403689192321348	0.3371148144540197	0.09389212646370858	0.928598810934635	3.5252452987658955	0.026402376917219174	0.4199757578061444	4.887478857941704e-07	6.310915108245512	-0.2706447388254083	
SIS(ph)ADDDLQESSRRPQR	ddPTM_K562_Methotrexat_30min_R1	1	SISADDDLQESSRRPQR	17	2	A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MT02;A0A0A0MSN9;P18615-4;P18615;P18615-3	A2ABK4	NELFE	Negative elongation factor E	1	S(0.199)IS(0.801)ADDDLQESSRRPQR	73.688	0.015549	12234000.0	1060.2	913.65	1428.7	1457.6	893.3	976.75	901.34	1003.0	914.02	1263.1	True	False	1013.5948774476356	1064.6151331053454	1128.835394340703	1329.8144710699928	1010.7846076990752	1165.4931137751337	1103.488439200964	967.7239214941887	871.5274097017822	1034.3403503107513	0.9799432818637664	1.0292696526684844	1.091357785666548	1.2856643083395818	0.9772263137519491	1.1267984599314718	1.06685235558048	0.9355952527651573	0.842592488478232	1.0	10.014495268101328	-9.26880056880876	4.0443537399759135	0.9124205241771557	1.0850739496789252	0.38058601486254107	0.08972041170694847	0.21954594335209307	8.604359471467896	0.050779175746400486	0.024797039238382394	5.385170166848652e-10	9.26880056880876	0.17265342550176954	
SIS(ph)LGDSEGPIVATLAQPLR	ddPTM_K562_Methotrexat_30min_R1	2	SISLGDSEGPIVATLAQPLR	20	0	O43379;O43379-4	O43379	WDR62	WD repeat-containing protein 62	1	S(0.208)IS(0.79)LGDS(0.002)EGPIVATLAQPLR;S(0.001)IS(0.999)LGDSEGPIVATLAQPLR	235.72	3.0655999999999994e-57	159220000.0	1725.73	1268.01	1484.3200000000002	1532.33	1545.28	1271.6100000000001	1359.01	1805.6399999999999	1949.0	2337.5	True	False	1649.8689755307564	1477.5271000152252	1172.7815164329766	1397.9930079958028	1748.5114055582974	1517.3306356873275	1663.802586991039	1742.1346177535052	1858.3914154053218	1914.1560991618883	0.8619302136608139	0.7718947794603372	0.6126885455927434	0.7303443060928588	0.9134633305632084	0.79268907919876	0.8692094587894549	0.9101319471887885	0.970867222489857	1.0	10.902492770862116	-9.003665063473761	0.6686892141002779	1.0003161061371026	0.7472958718094015	0.5808243601513987	0.07233849267566568	0.559672705393978	0.4884723817720535	0.07099089818123601	0.04119757582640512	9.915963888983845e-10	9.003665063473761	-0.25302023432770115	
SIS(ph)NEGLTLNNSHVSK	ddPTM_K562_Methotrexat_30min_R1	1	SISNEGLTLNNSHVSK	16	0	Q08AD1-2;Q08AD1-3;Q08AD1	Q08AD1-2	CAMSAP2	Calmodulin-regulated spectrin-associated protein 2	1	S(0.387)IS(0.496)NEGLT(0.117)LNNSHVSK	76.733	0.020943	4194300.0	1541.3	1228.9	2120.5	1774.4	1194.8	1129.6	1155.8	1490.0	1840.0	1525.3	True	False	1473.5462975005103	1431.9548372715585	1675.4360283470717	1618.8411069337242	1351.9371423697019	1347.8792130231793	1415.0175716471856	1437.5958554599604	1754.458801614056	1249.0533895408046	1.1797304341347947	1.1464320494722766	1.3413646225026619	1.2960543724466946	1.0823693796361427	1.0791205758776306	1.1328719680808803	1.1509482841149572	1.4046307518200292	1.0	10.286619429485905	-7.758330715991596	24.999963009535417	1.14563818677818	1.2413243603746218	0.16095943541197255	0.11077371235051527	170.07726295179538	1367753.7308804488	0.0342297200831173	0.042319315549247075	1.7444932124212e-08	7.758330715991596	0.09568617359644183	
SIS(ph)PEVSASRR	ddPTM_K562_Methotrexat_30min_R1	2	SISPEVSASRR	11	1	Q9Y2F5	Q9Y2F5	ICE1	Little elongation complex subunit 1	1	S(0.121)IS(0.879)PEVSASRR;S(0.048)IS(0.952)PEVSASRR	81.709	0.019666	19885100.0	2774.5	2782.7	3731.8	3094.0	2349.76	2595.3	2415.8999999999996	2776.5	2634.4	3515.4	True	False	2652.536302092496	3242.4938771873753	2948.5461780644205	2822.753823744895	2658.7946264267075	3096.8049942980324	2957.727073319292	2678.848921264818	2511.92731900656	2878.72699507752	0.9214268343709568	1.126363799947643	1.0242534922923527	0.980556276636049	0.9236008245912566	1.075755012404238	1.0274427128299621	0.930567200656928	0.8725826809217515	1.0	11.491215261641496	-9.269723320892533	21.314166843957533	0.926181100170995	1.0141817819407446	0.2209910545220729	0.06552380003055511	116.37154802439944	299405.1594078686	0.034643359039622325	0.017198318047095526	5.373740360821452e-10	9.269723320892533	0.08800068176974962	
SIS(ph)TSGPLDKEDTGR	ddPTM_K562_Methotrexat_30min_R1	1	SISTSGPLDKEDTGR	15	1	A0A0U1RR27;Q7Z401;Q7Z401-2	A0A0U1RR27	DENND4A	C-myc promoter-binding protein	1	SIS(0.614)T(0.298)S(0.088)GPLDKEDTGR	188.0	9.1272e-06	19171000.0	2808.2	2196.5	3752.7	2883.6	1601.5	2114.8	2119.5	2438.6	2696.0	3085.1	True	False	2684.7548904437376	2559.4342908837	2965.059553679819	2630.79926507782	1812.1253209784713	2523.4551697073503	2594.8518282628584	2352.8330557883623	2570.6635484518993	2526.3584947697723	1.0626975134375773	1.0130922813141539	1.17364956708174	1.0413404394207186	0.7172874810641673	0.9988507865893013	1.027111486210245	0.9313140081502078	1.01753712063187	1.0	11.30284365930976	-7.538118685116003	24.999957732413712	0.9451003167391036	1.0813667673474965	0.3135351367827224	0.09137331269170325	282.55694716218784	463510.5397472633	0.02734928734671659	0.03532044309133063	2.896551902355641e-08	7.538118685116003	0.13626645060839293	
SISAS(ph)KASPPGDLQNPKR	ddPTM_K562_Methotrexat_30min_R1	1	SISASKASPPGDLQNPKR	18	2	O00273	O00273	DFFA	DNA fragmentation factor subunit alpha	1	S(0.028)IS(0.025)AS(0.936)KAS(0.011)PPGDLQNPKR	83.06299999999999	0.023857	16680000.0	1608.3	720.35	2710.2	2013.4	828.24	746.8	883.18	1027.5	1350.5	1982.4	True	False	1537.6010577240454	839.3755936435576	2141.3660570743855	1836.8883480051627	937.1680773320066	891.1085307061892	1081.2555969262512	991.3622426074558	1287.7155497716205	1623.3681501512417	0.9471671953036619	0.5170580644725332	1.319088376148617	1.1315291283952	0.5772985488502377	0.5489257200365603	0.6660569241952391	0.6106823289067825	0.7932369189648386	1.0	10.664774498452994	-7.769480269924831	24.999970900290464	0.6707132985160242	0.9700482044155521	0.26526429678310626	0.22455613966020618	239.44785984365248	744466.5140552731	0.07115356567190001	0.08208626100870063	1.7002771957816826e-08	7.769480269924831	0.2993349058995278	
SISASKAS(ph)PPGDLQNPK	ddPTM_K562_Methotrexat_30min_R1	1	SISASKASPPGDLQNPK	17	1	O00273	O00273	DFFA	DNA fragmentation factor subunit alpha	1	SISAS(0.001)KAS(0.999)PPGDLQNPK	91.59200000000001	0.0039991	18003000.0	2460.8	1467.4	3944.8	2518.6	1582.7	1203.3	1252.6	1708.4	1912.0	3429.7	True	False	2352.626178478724	1709.8629084647123	3116.8403888816465	2297.798248378764	1790.8527914534036	1435.8206949635194	1533.5274357546846	1648.3146036696612	1823.1115373293871	2808.5480955274993	0.8376663309505673	0.6088067037867718	1.10976927681783	0.8181445252933058	0.6376436260092057	0.5112323685145383	0.5460214258736625	0.586892069355884	0.6491295414284055	1.0	11.455608793501662	-7.7493064462667665	5.099243989628539	0.6206556452601999	0.8482831563437081	0.21417421230476696	0.17015298484365987	0.23659306233684696	16.964841418462814	0.050700379916042225	0.06269021664487724	1.781121531444167e-08	7.7493064462667665	0.2276275110835082	
SISREPS(ph)PALGPNLDGSGLLPR	ddPTM_K562_Methotrexat_30min_R1	1	SISREPSPALGPNLDGSGLLPR	22	1	Q9BRZ2	Q9BRZ2	TRIM56	E3 ubiquitin-protein ligase TRIM56	1	S(0.033)IS(0.337)REPS(0.631)PALGPNLDGSGLLPR	68.565	0.005203800000000001	12063000.0	498.81	357.21	382.91	349.09	228.65	362.11	218.75	487.9	523.17	498.75	True	False	476.8829096582297	416.23288096816134	302.5424237747592	318.4858216971899	258.72148276099153	432.082632637946	267.81025592474634	470.74028045564745	498.8479408915353	408.4215420136866	1.1676242817824947	1.0191256781313778	0.7407602015385876	0.7797968249346583	0.6334667889587507	1.0579330132969982	0.6557202017413953	1.1525843571685856	1.2214045773198183	1.0	8.673915152309464	-9.2917871128499	24.427593753001933	1.140245992961959	0.8613216674768068	0.3201266695343211	0.1729619922803873	629.216034752814	506466.29270842735	0.09633986363259864	0.046290055546046836	5.107553061625564e-10	9.2917871128499	-0.2789243254851522	
SISSPS(ph)VSSETMDKPVDLSTRK	ddPTM_K562_Methotrexat_30min_R1	1	SISSPSVSSETMDKPVDLSTRK	22	2	P49792	P49792	RANBP2	E3 SUMO-protein ligase RanBP2	1	S(0.019)IS(0.299)S(0.299)PS(0.358)VS(0.011)S(0.011)ET(0.003)MDKPVDLSTRK	67.097	0.026063	16107000.0	3826.9	2174.6	5751.8	3980.8	2047.7	1912.1	1809.9	3138.9	2963.8	4798.0	True	False	3658.6740582006764	2533.9156881200506	4544.575782997732	3631.8094445907163	2317.00844194044	2281.586263475233	2215.8161471917656	3028.5031078545435	2826.0135849042044	3929.0357064294094	0.9311888034546701	0.6449205040243317	1.156664414009031	0.924351346221589	0.5897142747134941	0.5806987856439387	0.5639592797708203	0.77080060710539	0.7192639100428032	1.0	11.93995956349319	-7.749345597701928	24.922085685996624	0.6794384641774972	0.9123543636193403	0.27093481831687616	0.16599252149608998	269.43706827854857	555235.9105874976	0.04888873661184555	0.06262331338324087	1.780960971446437e-08	7.749345597701928	0.2329158994418431	
SIVPS(ph)SPQPQR	ddPTM_K562_Methotrexat_30min_R1	3	SIVPSSPQPQR	11	0	A0A1X7SBY3;H0Y860;Q9P246;Q9P246-2;H7C5K2;H7C5C6;H7C5A5;Q9P246-3	A0A1X7SBY3	STIM2	Stromal interaction molecule 2	1	SIVPS(0.5)S(0.5)PQPQR;S(0.006)IVPS(0.497)S(0.497)PQPQR;S(0.001)IVPS(0.5)S(0.5)PQPQR	142.76	1.5319e-05	150485000.0	10661.4	9423.5	10823.6	10108.4	9586.4	9191.8	8326.0	10564.7	9939.599999999999	11652.5	True	False	10192.737621599907	10980.573202887566	8551.874273245632	9222.212266303455	10847.179629739627	10967.985260505018	10193.317443791717	10193.133512871033	9477.510165501664	9542.119334966379	1.0681838346172623	1.1507478388632262	0.8962237814306023	0.9664742121290971	1.13676838959569	1.1494286411105403	1.0682445991258012	1.0682253234372223	0.9932290545531159	1.0	13.220094013626062	-3.5578084960297733	1.2527182565352466	1.0490266831687436	50.227856311818364	0.013009251225478358	0.0800388898300018	10901.041397687522	19.3776213375588	0.025067843347206673	1539888.7363862968	0.0002768162008957932	3.5578084960297733	49.17882962864962	
SIVPSS(ph)PQPQR	ddPTM_K562_Methotrexat_30min_R1	1	SIVPSSPQPQR	11	0	A0A1X7SBY3;H0Y860;Q9P246;Q9P246-2;H7C5K2;H7C5C6;H7C5A5;Q9P246-3	A0A1X7SBY3	STIM2	Stromal interaction molecule 2	1	S(0.005)IVPS(0.497)S(0.498)PQPQR	103.44	0.0046402	24908000.0	1900.7	2075.5	2136.8	1837.1	1663.2	1811.3	1813.2	1717.2	1920.8	1999.8	True	False	1817.147503833918	2418.4410975320366	1688.314881099751	1676.0442952817546	1881.939952451699	2161.3080900751456	2219.856256195429	1656.8051026817743	1831.5024272501498	1637.6168415417953	1.1096292232333766	1.476805218524197	1.0309584258490063	1.0234654729758277	1.1491943076744842	1.3197886314116687	1.3555406856377117	1.0117171860066567	1.118394963211183	1.0	10.677382129143798	-9.291609822515367	24.891077761657552	1.0487920224983414	1.2075522535664864	0.2296587618469813	0.13916264933548075	1154.0168693758683	952074.7161383788	0.07991060607968184	0.03839589723187483	5.109638523638618e-10	9.291609822515367	0.15876023106814507	
SIY(ph)PAVLGAT(ph)MES(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SIYPAVLGATMESR	14	0	H3BRF9	H3BRF9	ZFYVE19		3	S(0.195)IY(0.895)PAVLGAT(0.914)MES(0.995)R	58.11600000000001	0.029289999999999997	14357000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
SIYGEKFEDENFILK	ddPTM_K562_Methotrexat_30min_R1	2	SIYGEKFEDENFILK	15	1	F8WE65;C9J5S7;P62937-2;P62937	F8WE65	PPIA	Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed	0	;	146.47	1.4930999999999999e-21	9280200.0	3726.2	2406.8999999999996	5581.9	4432.1	2465.9	1743.54	2118.8999999999996	3316.6000000000004	3540.1	5038.5	False	True	3562.400709625899	2804.5993146951864	4410.335471176854	4043.5446742791705	2790.2090721203967	2080.4544290673107	2594.117262989462	3199.953298133224	3375.5215236923486	4125.978825936763	0.8634074143163084	0.6797415675196611	1.068918590529977	0.9800207041443367	0.676253851469271	0.504232938857839	0.6287277207246678	0.7755622200525243	0.8181141169395045	1.0	12.01052070215541	-4.886602220901317	11.007673109520036	0.7860665268599968	0.8767792491688332	0.0	0.17264400858400544	0.0	0.0	0.042649813423694796	0.0	1.2983679279854143e-05	4.886602220901317	0.09071272230883642	
SKAPGS(ph)PLSSEGAAGEGVR	ddPTM_K562_Methotrexat_30min_R1	2	SKAPGSPLSSEGAAGEGVR	19	1	Q6JBY9;B7ZKW8	Q6JBY9	RCSD1	CapZ-interacting protein	1	S(0.16)KAPGS(0.772)PLS(0.034)S(0.034)EGAAGEGVR;S(0.019)KAPGS(0.977)PLS(0.002)S(0.002)EGAAGEGVR	87.80799999999999	0.0025496	434730000.0	6658.4	4444.2	8711.1	7984.299999999999	4861.299999999999	4327.2	4384.9	5415.299999999999	5642.4	7350.7	True	False	6365.704708543042	5178.528511516205	6882.759154225028	7284.328815425455	5500.646158521789	5163.370158103667	5368.325445505924	5224.840829578742	5380.08605555823	6019.417000260659	1.0575284464039272	0.8603039980934963	1.1434262078747799	1.2101385923437473	0.9138170952907225	0.8577857553115322	0.8918347815533397	0.8679978192825801	0.8937885604744208	1.0	12.555408048796128	-7.965926541628673	24.461680466423108	0.8925364294802719	1.0588675488443262	0.4343007266334873	0.09100692511039389	145.6245928423167	104544.61462147142	0.029631436904026642	0.03359870574476834	1.0816168849958938e-08	7.965926541628673	0.16633111936405431	
SKAPGSPLS(ph)SEGAAGEGVR	ddPTM_K562_Methotrexat_30min_R1	1	SKAPGSPLSSEGAAGEGVR	19	1	Q6JBY9;B7ZKW8	Q6JBY9	RCSD1	CapZ-interacting protein	1	SKAPGS(0.039)PLS(0.729)S(0.232)EGAAGEGVR	144.74	1.0375999999999999e-11	72452000.0	3869.1	3345.0	5378.7	4551.5	2986.1	2525.7	2652.7	3285.6	3376.1	4842.3	True	False	3699.0189967295273	3897.70439472159	4249.784374284552	4152.477061659629	3378.8244901491194	3013.7557793313085	3247.635501218626	3170.0435857041907	3219.1458478963114	3965.312547153633	0.9328442468891246	0.9829501075569507	1.0717400769165388	1.0472004444240708	0.8520953770906395	0.7600298194639492	0.8190112286482518	0.7994435616379597	0.8118265104240188	1.0	11.953218868739558	-7.8316201460888095	5.651142848559733	0.8230828516677094	1.0110958921755	0.5800860418651501	0.0694484250796236	0.13001385305870572	7.485586007396613	0.021183702492539567	0.024351388909034075	1.4736008179329841e-08	7.8316201460888095	0.18801304050779055	
SKCLT(ph)ET(ph)PT(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	SKCLTETPTK	10	1	O00219	O00219	HAS3	Hyaluronan synthase 3	3	S(0.006)KCLT(0.995)ET(1)PT(1)K	57.885	0.032034	0.0	1816.4	1912.2	1990.5	2066.2	1992.1	1684.7	1668.9	1919.8	2051.5	1968.0	True	False	1736.5532308959487	2228.1585481574375	1572.721251791957	1885.059453982451	2254.0960673875825	2010.244431816706	2043.1933079442713	1852.2795458470002	1956.1262127778455	1611.5761296900953	1.0775496105355484	1.3825958991995684	0.9758901381186317	1.1696992895675034	1.3986904036739756	1.2473778897452859	1.2678230151852494	1.1493590105502445	1.2137969635688306	1.0	10.654256626538995	-10.769498306836242	1.1500220139698516	0.9995554782270349	1.21615039404652	0.20903266777146756	0.12167782016915858	8.271925929531434	10.90923134883355	0.1254884874138398	0.03569632927463496	1.7002065821459976e-11	10.769498306836242	0.21659491581948498	
SKDAS(ph)PINRWS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	1	SKDASPINRWSPTR	14	2	Q13523;H0YDJ3	Q13523	PRPF4B	Serine/threonine-protein kinase PRP4 homolog	2	S(0.16)KDAS(0.84)PINRWS(0.522)PT(0.478)R	99.915	0.02015	14283000.0	3440.9	2220.4	4748.0	4054.8	2388.5	2103.5	2113.1	3195.0	3075.5	3770.3	True	False	3289.6421560173276	2587.2833596531596	3751.459685259086	3699.321979483131	2702.6296154586826	2509.9716046337285	2587.0164653466586	3082.6300390567612	2932.5206762847974	3087.4621350460197	1.065484210697306	0.8379967904009923	1.2150625728089033	1.1981756593843997	0.8753563597690563	0.8129562387641449	0.837910345840759	0.9984349294734958	0.9498159161200813	1.0	11.592205728107157	-7.784701167110528	24.999656784279992	0.9036361002537869	1.071658402596597	0.34583268023390623	0.11178333679461341	285.4186800363883	306740.34261609596	0.03719782170776434	0.0422030847710166	1.6417190320625765e-08	7.784701167110528	0.16802230234281001	
SKDYDVYS(ph)DNDICSQESEDNFAK	ddPTM_K562_Methotrexat_30min_R1	1	SKDYDVYSDNDICSQESEDNFAK	23	1	A0A0C4DGZ1;Q8N5P1	A0A0C4DGZ1	ZC3H8	Zinc finger CCCH domain-containing protein 8	1	S(0.001)KDY(0.009)DVY(0.303)S(0.688)DNDICSQESEDNFAK	88.62700000000001	0.00020881	21564000.0	2217.9	1083.7	3363.1	2019.5	1243.2	1152.1	979.85	1257.9	1627.8	2623.5	True	False	2120.403771638476	1262.7630052495626	2657.231269480801	1842.4535704760224	1406.7025907214706	1374.7270195856986	1199.6063052245154	1213.6589440154928	1552.1239332974787	2148.3587277652264	0.9869877615104672	0.5877803315292315	1.236865722255294	0.857609833341281	0.6547801223982533	0.6398964017595526	0.558382680564886	0.5649237849946827	0.7224696291349978	1.0	11.069019195842564	-7.69336494749695	4.707798658256774	0.6588390733514651	0.9229646309496076	0.2539210095146278	0.1886325674417581	0.2599897634672393	11.044944245615705	0.055198667663267156	0.0708768617624091	2.0259795274878604e-08	7.69336494749695	0.2641255575981425	
SKESVPEFPLS(ph)PPK	ddPTM_K562_Methotrexat_30min_R1	1	SKESVPEFPLSPPK	14	1	A2A2D0;P16949;P16949-2	A2A2D0	STMN1	Stathmin	1	SKESVPEFPLS(1)PPK	123.58	0.00065407	106930000.0	5271.4	3280.8	9062.6	5356.6	3794.4	2960.6	2534.5	4345.3	4527.4	6190.8	True	False	5039.675567796136	3822.896435935006	7160.484107756743	4886.9951946580195	4293.430107974219	3532.694049288623	3102.9261423600906	4192.473336060512	4316.9221621888455	5069.586129921467	0.9940999992191091	0.7540845224764388	1.4124395807173447	0.9639830687192061	0.8468995294573936	0.6968407200812955	0.6120669543507999	0.8269853255507187	0.851533448994922	1.0	12.307652258186224	-7.7647477568869165	3.4702542533940157	0.7768132234790753	1.0446475021767532	0.2803247158397498	0.17822031033792815	0.2892252092210834	7.349640103477172	0.0570543985850287	0.07044035764770716	1.7189064574615538e-08	7.7647477568869165	0.26783427869767784	
SKETSSPGTDDVFTPAPS(ph)DSPSSQR	ddPTM_K562_Methotrexat_30min_R1	1	SKETSSPGTDDVFTPAPSDSPSSQR	25	1	P19634	P19634	SLC9A1	Sodium/hydrogen exchanger 1	1	SKETSSPGTDDVFT(0.001)PAPS(0.91)DS(0.08)PS(0.008)SQR	173.55	2.7936e-25	37587000.0	4247.7	3356.2	5774.1	4605.4	2989.7	2826.0	3112.2	4462.1	4206.5	5636.1	True	False	4060.9761940523704	3910.755004354144	4562.195317745259	4201.651732344779	3382.8979532496655	3372.084504252398	3810.190073092553	4305.165413857645	4010.9407331464813	4615.347675074364	0.8798852177451483	0.8473370328035218	0.988483563737536	0.9103651616618634	0.7329670896776285	0.7306241569760107	0.8255477899682091	0.932793305498546	0.8690441144462331	1.0	12.172223615136115	-10.200210398660147	1.225127319711423	0.9976197808543753	0.8491790682081084	0.2475121761270791	0.07625443290205804	1.2406186819287603	3.6641640979035093	0.08207805781134177	0.025220299624401695	6.306517444002951e-11	10.200210398660147	-0.1484407126462669	
SKETSSPGTDDVFTPAPSDS(ph)PSSQR	ddPTM_K562_Methotrexat_30min_R1	1	SKETSSPGTDDVFTPAPSDSPSSQR	25	1	P19634	P19634	SLC9A1	Sodium/hydrogen exchanger 1	1	SKETSSPGTDDVFTPAPS(0.063)DS(0.524)PS(0.367)S(0.045)QR	79.82	0.00062096	35247000.0	3557.3	2581.3	5243.3	3994.1	2915.0	3117.9	2864.0	3545.7	3804.2	4637.3	True	False	3400.925351390753	3007.815950402047	4142.8029839340725	3643.943454240299	3298.373593913359	3720.390048056808	3506.324904998737	3420.9957212781087	3627.3435723370617	3797.440033644247	0.895583688289878	0.7920641073337951	1.090946255169274	0.959578932637774	0.8685781907523753	0.9797100191432129	0.9233391110679006	0.9008689251098245	0.9552075978026833	1.0	11.890811467599548	-3.0000068961431015	0.010377891885101161	1.756585371137399	1.5981757351441643e-06	0.08593792711674597	0.07357830409643352	36463.40013781119	29.31840944144838	2126.261389865888	2890.5035083764037	0.0009999841211697654	3.0000068961431015	-1.756583772961664	
SKHDSSAPDPAPDS(ph)ADEVMPEAVPEVASEPGLESASHPNVDR	ddPTM_K562_Methotrexat_30min_R1	1	SKHDSSAPDPAPDSADEVMPEAVPEVASEPGLESASHPNVDR	42	1	Q9BTC0;Q9BTC0-1	Q9BTC0	DIDO1	Death-inducer obliterator 1	1	SKHDSSAPDPAPDS(0.99)ADEVMPEAVPEVAS(0.008)EPGLES(0.001)ASHPNVDR	61.776	6.878e-05	12968000.0	397.67	444.16	617.49	438.02	270.92	347.47	219.4	364.3	441.81	481.41	True	False	380.1889029566132	517.5498905708649	487.8872875001336	399.6194666699221	306.5507286665547	414.6136598346001	268.606034970923	351.4873625127945	421.27034953320947	394.22198404172195	0.9644030986267281	1.3128387343210437	1.2375953327059983	1.0136914805533241	0.777609420772717	1.051726379091837	0.6813573211140236	0.8915975687332427	1.0686120170523643	1.0	8.622864421213494	-7.464570506284209	4.549932030184776	0.9008281705887119	1.182101645561538	0.40948230560293286	0.1387260812362021	0.19361825832979332	8.189167041452302	0.03939156277890016	0.05801444726710646	3.4310693298985094e-08	7.464570506284209	0.2812734749728262	
SKHEEEEWT(ph)DDDLVESL	ddPTM_K562_Methotrexat_30min_R1	2	SKHEEEEWTDDDLVESL	17	1	D6RHI7;P51946	D6RHI7	CCNH	Cyclin-H	1	SKHEEEEWT(1)DDDLVESL;SKHEEEEWT(1)DDDLVESL	101.75	0.0074595	90095000.0	11170.5	7711.599999999999	14056.5	12368.1	7245.3	7210.5	6696.6	9979.0	10353.2	14159.6	True	False	10679.45819517904	8985.810825212262	11106.232743438157	11283.807875714043	8198.183945104794	8603.827076401945	8198.483016345865	9628.032913848954	9871.881991777525	11595.159230670664	0.9210272996450555	0.7749622619621863	0.9578335685171762	0.9731481604725999	0.7070350464372719	0.742018880917455	0.7070608392043327	0.8303493485782919	0.8513795968980872	1.0	13.50123501149728	-6.233854742885889	21.75001848886378	0.8296502888406955	0.9210280503848015	0.04892398087020622	0.10356012161876894	4862.975258489918	3834013.066284453	0.02700072759551021	1.7314147451964685	5.836402799671047e-07	6.233854742885889	0.09137776154410604	
SKMGKWCHHRFPCCR	ddPTM_K562_Methotrexat_30min_R1	1	SKMGKWCHHRFPCCR	15	3	Q495V5;A0A0G2JQ08;A0A087X1W7;A0A0G2JQB7;A0A0C4DH93;A0A0A6YYL3;A0A0G2JMU2;A0JP26-2;H3BUK9;A0JP26-3;A0JP26;Q86YR6	Q495V5	POTEB;POTED;POTEB3;POTEB2	POTE ankyrin domain family member B3;POTE ankyrin domain family member B2;POTE ankyrin domain family member D	0		50.563	0.028693	26218000.0	993.24	1209.6	1400.8	1461.5	1112.2	956.82	735.53	1538.1	1238.9	1222.3	False	True	949.5783588719953	1409.465840315467	1106.7912230646446	1333.3725641251344	1258.4737945627583	1141.7119233399776	900.4913258986461	1484.0041511966203	1181.3038094128553	1000.9296256708348	0.9486964263202589	1.4081567816227105	1.1057632771363521	1.3321341779962728	1.2573049715851046	1.140651544382842	0.8996549835310612	1.4826258641330787	1.1802066590057534	1.0	9.96712482800203	-8.273006683334804	23.09292007970165	1.1557311227925582	1.222345618898382	0.029994761022472893	0.1826993678562047	1262.4940466044259	2520425.0682765925	0.0629873435260745	0.05609867493615801	5.333266880882837e-09	8.273006683334804	0.0666144961058237	
SKMSLRSY(ph)GSREGSVSS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SKMSLRSYGSREGSVSSR	18	3	P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7;D6RFL6;E7EMH9	P25054-2	APC	Adenomatous polyposis coli protein	2	S(0.058)KMS(0.103)LRS(0.103)Y(0.436)GS(0.292)REGS(0.015)VS(0.085)S(0.908)R	45.135	0.033427	0.0	1296.8	1136.3	1442.4	1590.0	984.82	1162.9	736.58	1318.7	1061.6	1346.6	True	False	1239.7942247444762	1324.054261202435	1139.6599515622802	1450.6071686342552	1114.3410918551476	1387.6139667357088	901.7768151270841	1272.3205735537251	1012.2464477138486	1102.7176911792078	1.124307911863356	1.2007191612084664	1.0335011042976627	1.3154837183060213	1.0105406857701813	1.2583583067864295	0.8177766824097612	1.1538044449011695	0.9179561149793358	1.0	10.106847775803283	-8.747791992229395	24.99998210303315	0.9852013009724732	1.1540444086730313	0.373335400876044	0.11676039141918047	255.55686846088142	468142.4106038156	0.041158351422340075	0.03170468525378613	1.787343428007213e-09	8.747791992229395	0.1688431077005581	
SKPNLPSESRS(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	SKPNLPSESRSR	12	2	Q08170	Q08170	SRSF4	Serine/arginine-rich splicing factor 4	1	SKPNLPS(0.005)ES(0.058)RS(0.936)R;SKPNLPS(0.005)ES(0.032)RS(0.964)R	75.764	0.025574	14326700.0	6946.799999999999	6042.299999999999	9726.2	7749.3	6273.299999999999	5572.7	4809.7	6583.299999999999	6317.4	8919.6	True	False	6641.426989863451	7040.687373460767	7684.803536387306	7069.9309005644245	7098.348907957692	6649.545405820003	5888.397659068583	6351.761607550035	6023.705452889474	7304.174007308824	0.9092646181782904	0.9639265667022168	1.0521112351235897	0.9679302400914864	0.9718208932118573	0.9103760944312422	0.8061688636081831	0.8696071042658936	0.8246935857308347	1.0	12.834505419711938	-8.408704882658965	3.40467271125669	0.863561727132522	0.9767908655716115	0.37696057762584956	0.05852630651093994	0.2317337369050933	4.986193049099027	0.0215278024182169	0.018431319404568703	3.9020705509388774e-09	8.408704882658965	0.11322913843908955	
SKPVLEPLT(ph)PPLGSPRPR	ddPTM_K562_Methotrexat_30min_R1	1	SKPVLEPLTPPLGSPRPR	18	2	E7ESZ3;Q9H7P9-2;Q9H7P9-3;Q9H7P9;H7BXC7	E7ESZ3	PLEKHG2	Pleckstrin homology domain-containing family G member 2	1	SKPVLEPLT(1)PPLGSPRPR	88.945	0.0051822	11453000.0	2909.9	2562.9	4030.9	3420.0	2515.7	2193.0	2377.5	2602.6	2855.7	4026.7	True	False	2781.9842802158787	2986.3756631485708	3184.869175507761	3120.173909892549	2846.5586450112664	2616.7662129601918	2910.7148958221005	2511.0650828322778	2722.9391303093794	3297.425610479219	0.84368371234054	0.9056688507719078	0.9658653603545283	0.9462454285478453	0.8632669789319591	0.793578543407957	0.8827234453968721	0.7615228907218142	0.8257772735360212	1.0	11.68712439748135	-7.929947003323642	5.75818988493087	0.838490009050668	0.9177046019189732	0.14996709810886644	0.06703092055476381	0.29755145301420094	17.83744830505256	0.0203602144658261	0.02311064827694862	1.1750409356808045e-08	7.929947003323642	0.07921459286830523	
SKPVLEPLTPPLGS(ph)PRPR	ddPTM_K562_Methotrexat_30min_R1	1	SKPVLEPLTPPLGSPRPR	18	2	E7ESZ3;Q9H7P9-2;Q9H7P9-3;Q9H7P9;H7BXC7	E7ESZ3	PLEKHG2	Pleckstrin homology domain-containing family G member 2	1	SKPVLEPLT(0.398)PPLGS(0.602)PRPR	98.684	0.0040935	11258000.0	1345.8	1067.2	1562.3	1266.7	1038.2	965.34	700.98	1032.5	1170.1	1264.8	True	False	1286.6402434154195	1243.5366607016097	1234.3945800927274	1155.6503776786224	1174.741497496003	1151.8782927583184	858.1926089057318	996.186389773429	1115.702306395982	1035.7324638374148	1.2422515353514991	1.2006350134997943	1.1918083319694976	1.115780781261706	1.1342132630887674	1.1121388321561152	0.8285852175822573	0.9618182538013084	1.077210906629572	1.0	10.016435678670764	-8.574952565715684	7.424266757618189	0.9635404972571393	1.1706622315029724	0.6945106133377772	0.06581683556860159	0.13584268840133404	16.15711232615086	0.026605356522515815	0.020600104070628542	2.6610156839878863e-09	8.574952565715684	0.20712173424583313	
SKSEEAHAEDSVMDHHFR	ddPTM_K562_Methotrexat_30min_R1	7	SKSEEAHAEDSVMDHHFR	18	1	Q8NC51-4;Q8NC51-3;Q8NC51-2;Q8NC51	Q8NC51-4	SERBP1	Plasminogen activator inhibitor 1 RNA-binding protein	0	;;;;;;	91.65700000000001	0.0012235	435768000.0	47474.0	34602.7	62656.2	52216.399999999994	38225.0	33628.4	32860.3	43031.799999999996	46364.899999999994	55656.700000000004	False	True	45387.09980376257	40320.208029666	49505.5198676349	47638.669283191004	43252.2575050903	40126.612364756285	40230.058755492304	41518.347203343576	44209.405918997545	45576.73230555019	0.9958392694650351	0.884666495161522	1.0862016069020874	1.045241000689067	0.9489986516611938	0.8804188087848016	0.8826885281241019	0.9109548908640737	0.9699994642576397	1.0	15.47600987160389	-7.9721020803108	8.837345977796135	0.9197216137666671	1.0002052395211776	0.2554989282634784	0.058956122259412526	0.34947562635354973	100.23345973823727	0.01905378351345319	0.02148682150088376	1.0663454487643919e-08	7.9721020803108	0.08048362575451051	
SLAAAAPNGNSSSNSWEEGS(ph)SGSSSDEEHGGGGMR	ddPTM_K562_Methotrexat_30min_R1	1	SLAAAAPNGNSSSNSWEEGSSGSSSDEEHGGGGMR	35	0	Q9UKL0	Q9UKL0	RCOR1	REST corepressor 1	1	SLAAAAPNGNS(0.001)S(0.008)S(0.006)NS(0.013)WEEGS(0.217)S(0.217)GS(0.18)S(0.18)S(0.18)DEEHGGGGMR	62.183	0.0050426	15052000.0	1899.1	1813.6	2304.3	1739.2	1495.0	1708.3	1566.1	2100.3	1932.3	1786.4	True	False	1815.6178379181335	2113.2665740708744	1820.6589201226875	1586.7270362821985	1691.6187042540203	2038.4047978111707	1917.337791102835	2026.4312585386288	1842.4677947602393	1462.8656494300742	1.2411377891233484	1.4446074216686908	1.244583821372802	1.0846703775568045	1.1563732492543435	1.3934326768868515	1.310672509023519	1.3852476878708015	1.259492145077066	1.0	10.514581562134866	-13.12569266752801	2.0483308709451893	0.4901472445682004	1.2817718104746212	0.3937195428625898	0.10422586775046007	2716060.7743446515	640872.6612160387	6436567.657275699	0.029207682448970613	7.486991368967743e-14	13.12569266752801	0.7916245659064207	
SLAALDALNT(ph)DDENDEEEYEAWK	ddPTM_K562_Methotrexat_30min_R1	4	SLAALDALNTDDENDEEEYEAWK	23	0	P55081	P55081	MFAP1	Microfibrillar-associated protein 1	1	SLAALDALNT(1)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK	137.64	1.1136e-19	24794000.0	13964.4	11186.1	18470.3	15268.7	11609.6	10652.400000000001	10255.1	14317.400000000001	14283.7	18176.100000000002	True	False	13350.54169650043	13034.412893810219	14593.636441584023	13930.11677718606	13136.465892245817	12710.825538959036	12555.067225297673	13813.848926820427	13619.653904681903	14884.232159989906	0.8969587112721765	0.8757195368698857	0.9804762707755239	0.9358975745239589	0.8825759871952121	0.8539792582063337	0.8435146059496956	0.928086096638108	0.9150390667308121	1.0	13.861497178045283	-10.295414235110904	1.6755643553591457	0.9997306355051988	0.8985264011016911	0.38232099361795624	0.03828596877880097	1.3751270976805345	5.9626242824402835	0.040646064591075	0.011574997930248097	5.065073652061932e-11	10.295414235110904	-0.10120423440350768	
SLAALDALNT(ph)DDENDEEEYEAWKVR	ddPTM_K562_Methotrexat_30min_R1	3	SLAALDALNTDDENDEEEYEAWKVR	25	1	P55081	P55081	MFAP1	Microfibrillar-associated protein 1	1	S(0.001)LAALDALNT(0.999)DDENDEEEYEAWKVR;SLAALDALNT(1)DDENDEEEYEAWKVR;SLAALDALNT(1)DDENDEEEYEAWKVR	124.66	2.6778e-09	170175000.0	5810.0	4147.04	6973.700000000001	7273.9	3707.83	3542.3599999999997	4443.82	4288.99	4953.6	7311.5	True	False	5554.5993566975685	4832.267872372566	5510.015671249223	6636.208480458307	4195.474635581396	4226.870935769113	5440.45975535317	4138.1437906773235	4723.308217214884	5987.316500116425	0.9277276984755286	0.8070840872164685	0.9202813432598859	1.1083777649518385	0.7007270511755664	0.7059708528331382	0.9086641327959494	0.6911516687980093	0.7888856747631494	1.0	12.547693820324467	-7.7884802113765765	24.999999264079182	0.784599259690762	0.9298415519196196	0.2617433467288167	0.11436693091456676	292.0828390570137	270036.97768895986	0.03513261986391417	0.03984655283806183	1.6274954707665032e-08	7.7884802113765765	0.14524229222885754	
SLAGSSGPGAS(ph)SGTSGDHGELVVR	ddPTM_K562_Methotrexat_30min_R1	2	SLAGSSGPGASSGTSGDHGELVVR	24	0	E9PQ49;E9PI39;E9PK01;A0A087X1X7;E9PRY8;P29692;P29692-2;E9PPR1;E9PL12;E9PMW7;E9PIZ1;H0YCK7	E9PQ49	EEF1D	Elongation factor 1-delta	1	S(0.003)LAGS(0.209)S(0.07)GPGAS(0.481)S(0.204)GT(0.013)S(0.019)GDHGELVVR;S(0.001)LAGS(0.073)S(0.391)GPGAS(0.53)S(0.005)GTSGDHGELVVR	163.67	1.1437e-25	62238000.0	2242.74	1902.95	2431.0	2141.45	2167.3900000000003	1897.38	1823.0	1934.87	2120.5	2410.3999999999996	True	False	2144.1518349810517	2217.380142880554	1920.7663215806315	1953.7124033156135	2452.439774858278	2264.021831804108	2231.854155660858	1866.8195254052432	2021.9184178383723	1973.8532027464455	1.0862772530387013	1.1233764191760875	0.9731049497034794	0.9897962019653702	1.2424631028517827	1.1470061849857518	1.1307092911242977	0.9457742464372354	1.0243509573179244	1.0	10.946798983906856	-9.258080490816647	24.989242140688216	0.9887969497038488	1.0982287344365227	0.30910316759903966	0.07461042315032133	398.36267470856177	2963742.1116983383	0.04029205414556072	0.022005479441765435	5.519751284107788e-10	9.258080490816647	0.1094317847326739	
SLAPDRS(ph)DDEHDPLDNTSRPR	ddPTM_K562_Methotrexat_30min_R1	5	SLAPDRSDDEHDPLDNTSRPR	21	2	A0A0D9SFK2;Q92614-3;Q92614-4;Q92614;Q92614-5;Q92614-2	A0A0D9SFK2	MYO18A	Unconventional myosin-XVIIIa	1	S(0.098)LAPDRS(0.902)DDEHDPLDNTSRPR;S(0.022)LAPDRS(0.978)DDEHDPLDNTSRPR;S(0.056)LAPDRS(0.944)DDEHDPLDNTSRPR;S(0.019)LAPDRS(0.981)DDEHDPLDNTSRPR;S(0.003)LAPDRS(0.995)DDEHDPLDNTS(0.001)RPR	79.332	0.001813	2028401000.0	8849.7	7875.4	10328.699999999999	9764.2	8527.3	8342.35	7862.4000000000015	8781.3	8997.5	10391.0	True	False	8460.677784331576	9176.675991088314	8160.84702003697	8908.18774589848	9648.78941590991	9954.391070081383	9625.74334254961	8472.456701711775	8579.2081888709	8509.089209151307	0.9943106220149078	1.0784557272262505	0.9590740935305025	1.0469026151844727	1.133939153620917	1.1698538851109577	1.1312307470225331	0.9956948967698994	1.0082404800321263	1.0	13.054789002500303	-3.104612883633103	23.850986330824544	1.057451605000365	0.03834076945225995	0.0	0.06905191166562846	0.0	0.0	0.0171796928464578	0.0	0.000785935880864532	3.104612883633103	-1.019110835548105	
SLARHYDRRS(ph)MR	ddPTM_K562_Methotrexat_30min_R1	3	SLARHYDRRSMR	12	3	Q8N1G0;F8WCX2;Q8N1G0-2;H0Y5I5	Q8N1G0	ZNF687	Zinc finger protein 687	1	SLARHYDRRS(1)MR;SLARHYDRRS(1)MR;SLARHYDRRS(1)MR	81.278	0.0125	53924000.0	4747.799999999999	3681.38	4142.700000000001	5299.0	4172.1	3669.41	3750.95	4576.5	4817.1	5501.3	True	False	4539.0923968552015	4289.665472239214	3273.203883345161	4834.44489722825	4720.8042782730445	4378.471550158804	4592.196020392813	4415.541901015105	4593.154072421235	4504.96126131307	1.0075763438489997	0.9522091808152189	0.7265775871269343	1.0731379509840988	1.0479122914582093	0.9719221312199702	1.019364152990367	0.9801509147113283	1.019576818976343	1.0	12.13729898485144														
SLARPGT(ph)PLPSPQAPR	ddPTM_K562_Methotrexat_30min_R1	1	SLARPGTPLPSPQAPR	16	1	O95935	O95935	TBX18	T-box transcription factor TBX18	1	SLARPGT(0.999)PLPS(0.001)PQAPR	127.66	5.2323999999999994e-09	0.0	1114.3	819.63	1574.6	1232.4	1039.2	1152.2	1038.3	1016.7	1385.2	1130.3	True	False	1065.316706225147	955.0599261720947	1244.1129781821726	1124.3574054244375	1175.8730150239326	1374.846343170422	1271.1652056076082	980.9420847289545	1320.802354345538	925.5917171690618	1.1509574755956509	1.031837157200544	1.3441271730340387	1.2147444543511086	1.270401401840933	1.4853701882460801	1.3733541279901347	1.0597999814963586	1.4269816052213982	1.0	9.854232144050956	-6.761181358292785	24.999999999999996	1.2831431107441018	1.0913972900713902	0.19165869852265083	0.14677539442487153	9.637601090299974	933298.7714291378	0.03673454259781561	0.08570296267185688	1.7330801246648068e-07	6.761181358292785	-0.19174582067271162	
SLAS(ph)PQPCGLASHEEHR	ddPTM_K562_Methotrexat_30min_R1	1	SLASPQPCGLASHEEHR	17	0	Q9C073-2	Q9C073-2	FAM117A	Protein FAM117A	1	S(0.081)LAS(0.919)PQPCGLASHEEHR	67.312	0.029660000000000002	6271700.0	630.06	432.27	1184.5	823.02	685.39	548.9	521.07	561.16	766.83	702.86	True	False	602.3633168125423	503.6952701663089	935.8896371502502	750.8671144209842	775.5307984673337	654.9671565407428	637.9332116786637	541.4236847314843	731.1802406748403	575.5652431473478	1.0465595759720572	0.8751314923256409	1.6260357071468567	1.304573414327519	1.3474246537656092	1.137954670367522	1.108359511408769	0.9406816884404483	1.270368997051572	1.0	9.168835663970821	-8.498846199988714	4.52577888142148	1.0789905605422832	1.245380418194388	0.12573831533420277	0.19965377358698028	0.4664977474150591	23.483871402189536	0.07933940491512273	0.06571712848822278	3.1706901248766715e-09	8.498846199988714	0.1663898576521048	
SLASEAPSQPSLNGGS(ph)PEGVESQDGVDHFR	ddPTM_K562_Methotrexat_30min_R1	2	SLASEAPSQPSLNGGSPEGVESQDGVDHFR	30	0	P38935	P38935	IGHMBP2	DNA-binding protein SMUBP-2	1	SLASEAPSQPSLNGGS(1)PEGVESQDGVDHFR;SLASEAPSQPS(0.004)LNGGS(0.995)PEGVESQDGVDHFR	160.41	1.0204e-36	60670000.0	2612.9	2337.9	3023.8	2627.2	2493.1	2239.7	2349.6	2431.4	2724.6	2734.9	True	False	2498.0400445981213	2724.1982374946515	2389.1457026719536	2396.8774549911395	2820.9863488800665	2672.490327025509	2876.5576106093004	2345.8862838693617	2597.9339406943773	2239.5831082771556	1.1154040389774993	1.2163863119999578	1.0667814442080927	1.0702337618696303	1.2596033335195884	1.1932981264005764	1.2844165505526384	1.0474656087551857	1.1600078296236527	1.0	11.12901448855367	-10.333976150715404	1.196430727596589	1.0015185009745298	1.1643687711979072	0.2682691915931297	0.07803236340433821	1.6294641738634745	3.9020890859607995	0.07657514780462682	0.023497035857975707	4.6347237062602827e-11	10.333976150715404	0.1628502702233774	
SLATMDS(ph)PPHQK	ddPTM_K562_Methotrexat_30min_R1	1	SLATMDSPPHQK	12	0	Q14676;Q14676-3;Q14676-2;Q14676-4	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	1	SLAT(0.239)MDS(0.761)PPHQK	79.492	0.029901	7795400.0	5208.1	4214.2	7197.2	5355.7	4478.5	4056.8	3270.6	5215.5	5587.1	6068.3	True	False	4979.15816000286	4910.524920847752	5686.606075557437	4886.17409626068	5067.5012488305265	4840.719185014552	4004.115305268462	5032.067908826459	5327.356940487983	4969.272066970732	1.0019894449124325	0.9881779171413344	1.1443539413659014	0.9832776371287095	1.0197673181375386	0.9741304399872502	0.8057750212315041	1.0126368290987953	1.0720598245963093	1.0	12.278818816070002	-8.021066306962545	2.2672541815951397	0.9646022615915351	1.0353305507421797	0.10814983293030134	0.07637011802951225	0.6543043611689915	6.7320028934899865	0.028910077586610204	0.03116483337475521	9.526507046646528e-09	8.021066306962545	0.07072828915064466	
SLDGAAAVDS(ph)ADRSPRPTSAPAITQGQVAEGGVLDASAK	ddPTM_K562_Methotrexat_30min_R1	1	SLDGAAAVDSADRSPRPTSAPAITQGQVAEGGVLDASAK	39	2	P11171;A0A2R8Y5Z6;A0A2R8Y420;A0A2R8Y5G2;A0A2R8YD30;A0A2R8YCW8;P11171-2;P11171-4;P11171-7;P11171-3;Q4VB86;A0A2R8Y6G5;A0A2U3TZH6;A0A3B3IU06;A0A2R8Y570;A0A2R8Y4N6;A0A2R8YFR9;A0A2R8Y7Y3;A0A2R8Y7N0;P11171-5;P11171-6;A0A3B3IUD6;A0A3B3ITP0	P11171	EPB41	Protein 4.1	1	S(0.019)LDGAAAVDS(0.222)ADRS(0.184)PRPT(0.184)S(0.184)APAIT(0.208)QGQVAEGGVLDASAK	48.07	0.0013977	222020000.0	4335.0	3544.1	6033.4	4879.1	3629.9	3470.9	3273.0	4210.4	4626.5	5504.3	True	False	4144.438590582439	4129.702285600236	4767.071791289425	4451.356878291439	4107.295474629881	4141.602302126556	4007.0535663620326	4062.3178455225593	4411.415024819252	4507.417932242477	0.9194706709880234	0.9162013258321656	1.0576058983103367	0.9875624903672628	0.9112302290075125	0.9188414219371213	0.8889909093405259	0.9012516493010275	0.978701130255418	1.0	12.138085509026382	-7.762094328072469	24.999958861402035	0.9253064978912696	0.972594886923895	0.10769600928788348	0.049011042155756586	33.17806190693296	1266460.29078895	0.01543151193104255	0.01856012077218796	1.7294406866454225e-08	7.762094328072469	0.04728838903262533	
SLDGAAAVDS(ph)ADRSPRPTSAPAITQGQVAEGGVLDASAKK	ddPTM_K562_Methotrexat_30min_R1	1	SLDGAAAVDSADRSPRPTSAPAITQGQVAEGGVLDASAKK	40	3	P11171;A0A2R8Y5Z6;A0A2R8Y420;A0A2R8Y5G2;A0A2R8YD30;A0A2R8YCW8;P11171-2;P11171-4;P11171-7;P11171-3;Q4VB86;A0A2R8Y6G5;A0A2U3TZH6;A0A3B3IU06;A0A2R8Y570;A0A2R8Y4N6;A0A2R8YFR9;A0A2R8Y7Y3;A0A2R8Y7N0;P11171-5;P11171-6;A0A3B3IUD6;A0A3B3ITP0	P11171	EPB41	Protein 4.1	1	S(0.001)LDGAAAVDS(0.711)ADRS(0.175)PRPT(0.056)S(0.012)APAIT(0.045)QGQVAEGGVLDASAKK	74.369	4.9795e-09	19062000.0	1590.1	1284.7	3242.2	2157.0	1175.3	1214.8	1133.7	1703.3	1751.8	2313.8	True	False	1520.2011079319807	1496.9748388337316	2561.706527284544	1967.8991589585444	1329.8725505750845	1449.5429072065856	1387.9610840771884	1643.3939735603701	1670.359200362772	1894.7483988195836	0.8023234688463421	0.7900652349231896	1.3520035319098151	1.0386071101495762	0.7018728984827678	0.7650318681412486	0.7325305486163121	0.8673415291361082	0.8815730898114997	1.0	10.887790572174932	-7.747102934582921	24.977763627590313	0.8104976823707485	1.006504815441329	0.2005917870733086	0.16524996506687503	366.31973583034915	638220.260628234	0.051588431818738636	0.06628746333816986	1.790181502740571e-08	7.747102934582921	0.19600713307058049	
SLDGAAAVDSADRS(ph)PRPTSAPAITQGQVAEGGVLDASAK	ddPTM_K562_Methotrexat_30min_R1	3	SLDGAAAVDSADRSPRPTSAPAITQGQVAEGGVLDASAK	39	2	P11171;A0A2R8Y5Z6;A0A2R8Y420;A0A2R8Y5G2;A0A2R8YD30;A0A2R8YCW8;P11171-2;P11171-4;P11171-7;P11171-3;Q4VB86;A0A2R8Y6G5;A0A2U3TZH6;A0A3B3IU06;A0A2R8Y570;A0A2R8Y4N6;A0A2R8YFR9;A0A2R8Y7Y3;A0A2R8Y7N0;P11171-5;P11171-6;A0A3B3IUD6;A0A3B3ITP0	P11171	EPB41	Protein 4.1	1	S(0.057)LDGAAAVDS(0.18)ADRS(0.484)PRPT(0.132)S(0.132)APAIT(0.016)QGQVAEGGVLDASAK;S(0.104)LDGAAAVDS(0.163)ADRS(0.455)PRPT(0.132)S(0.132)APAIT(0.015)QGQVAEGGVLDASAK;S(0.055)LDGAAAVDS(0.041)ADRS(0.711)PRPT(0.084)S(0.084)APAIT(0.023)QGQVAEGGVLDASAK	64.612	1.5823e-05	348013000.0	8278.5	5932.1	10870.8	8183.4	5881.599999999999	5827.799999999999	5208.9	7112.799999999999	7299.9	9390.3	True	False	7914.587052396012	6912.2786965404985	8589.167638271798	7465.974027548149	6655.133492267859	6953.939870446604	6377.128420966452	6862.638792426577	6960.529242338283	7689.6256761325685	1.0292551790865048	0.8989096462777327	1.1169812420039211	0.9709151448972867	0.8654691102746891	0.9043274878815725	0.829315845732269	0.8924542079762305	0.9051844050020159	1.0	12.908697655497924	-7.610798532198379	5.224020158957712	0.8914510052357941	1.009570991170572	0.3978696374931825	0.06402001309014937	0.19404613296530387	8.795833005781237	0.018393761638608234	0.023969478043663783	2.450199617899872e-08	7.610798532198379	0.1181199859347778	
SLDGAAAVDSADRS(ph)PRPTSAPAITQGQVAEGGVLDASAKK	ddPTM_K562_Methotrexat_30min_R1	2	SLDGAAAVDSADRSPRPTSAPAITQGQVAEGGVLDASAKK	40	3	P11171;A0A2R8Y5Z6;A0A2R8Y420;A0A2R8Y5G2;A0A2R8YD30;A0A2R8YCW8;P11171-2;P11171-4;P11171-7;P11171-3;Q4VB86;A0A2R8Y6G5;A0A2U3TZH6;A0A3B3IU06;A0A2R8Y570;A0A2R8Y4N6;A0A2R8YFR9;A0A2R8Y7Y3;A0A2R8Y7N0;P11171-5;P11171-6;A0A3B3IUD6;A0A3B3ITP0	P11171	EPB41	Protein 4.1	1	S(0.007)LDGAAAVDS(0.073)ADRS(0.259)PRPT(0.22)S(0.22)APAIT(0.22)QGQVAEGGVLDASAKK;S(0.014)LDGAAAVDS(0.104)ADRS(0.262)PRPT(0.262)S(0.262)APAIT(0.095)QGQVAEGGVLDASAKK	49.81399999999999	0.00055791	60611000.0	1942.26	1581.96	3410.7000000000003	2387.19	1722.96	1400.13	1340.79	1718.19	1737.32	2797.2	True	False	1856.880575996459	1843.3520012776582	2694.840679973288	2177.908759051577	1949.5594399207416	1670.6853067724362	1641.4962881889855	1657.7602838206362	1656.5523724022444	2290.5999745778113	0.8106524913145112	0.8047463641561479	1.1764780886588386	0.9508027517781646	0.8511130103719101	0.7293658104053573	0.7166228527054513	0.7237231739366381	0.7231958398618116	1.0	11.161509816162415	-7.995191652950535	3.4827865528770023	0.7584693844882696	0.9422785762418623	0.2527090249439434	0.12443299702699674	0.2996275176664389	7.752278855478024	0.042411631650242435	0.046100176679262826	1.0111331455365587e-08	7.995191652950535	0.18380919175359267	
SLDGAAVDSADRS(ph)PRPTSAPAITQGQVAEGGVLDASAK	ddPTM_K562_Methotrexat_30min_R1	2	SLDGAAVDSADRSPRPTSAPAITQGQVAEGGVLDASAK	38	2	A0A2R8Y6D0;A0A1B0GWG0	A0A2R8Y6D0			1	S(0.121)LDGAAVDS(0.262)ADRS(0.328)PRPT(0.103)S(0.103)APAIT(0.082)QGQVAEGGVLDASAK;S(0.038)LDGAAVDS(0.093)ADRS(0.341)PRPT(0.341)S(0.083)APAIT(0.104)QGQVAEGGVLDASAK	74.874	1.2432e-08	40017000.0	3776.1000000000004	2591.3999999999996	4510.799999999999	3793.5	2722.26	3201.8	2637.4	3333.2	3386.2	4279.700000000001	True	False	3610.107165374473	3019.5848037313995	3564.044723729295	3460.929744788708	3080.284905580304	3820.502535638824	3228.9040867470926	3215.9694667242547	3228.776301100822	3504.6048588590947	1.0301039092178066	0.8616049241894874	1.0169605040408323	0.9875377921821963	0.878925022829271	1.0901378870091987	0.9213318524583239	0.9176411025610449	0.9212953902460583	1.0	11.775036075459877														
SLDLFNCEVTNLNDYR	ddPTM_K562_Methotrexat_30min_R1	1	SLDLFNCEVTNLNDYR	16	0	H0YN26;Q92688-2;P39687;Q92688	H0YN26	ANP32A;ANP32B	Acidic leucine-rich nuclear phosphoprotein 32 family member B;Acidic leucine-rich nuclear phosphoprotein 32 family member A	0		157.2	1.8169000000000002e-09	4178700.0	975.83	710.15	984.81	813.17	1037.0	1065.9	795.07	1220.3	1052.6	1146.9	False	True	932.9336816258499	827.4902170139131	778.1118392249371	741.880648627872	1173.3836764624884	1271.8700895550712	973.3846865284025	1177.3813573273749	1003.6648557494314	939.1852963117741	0.9933435769166377	0.8810723722608382	0.8284966153970039	0.7899193604726065	1.2493633376399977	1.3542270034994865	1.0364138901566402	1.2536198787938952	1.0686547795103603	1.0	9.875266011868199	-7.7623307334542035	24.999774010217585	1.1765548903781944	0.8705760334742066	0.6039942394240714	0.11345454882046851	15.421453102389425	432530.6527148495	0.03423705634443864	0.04111884353462952	1.728499533014048e-08	7.7623307334542035	-0.30597885690398774	
SLDNGGYY(ph)ISPR	ddPTM_K562_Methotrexat_30min_R1	1	SLDNGGYYISPR	12	0	P07948-2;P07948	P07948-2	LYN	Tyrosine-protein kinase Lyn	1	SLDNGGY(0.207)Y(0.792)IS(0.001)PR	124.6	0.00058709	10630000.0	780.12	534.56	1066.5	984.61	545.5	656.51	790.01	601.4	751.84	651.45	True	False	745.8268588893126	622.886954033595	842.6562245848398	898.2907700056434	617.24281148533	783.3712660604174	967.1898527227833	580.2484211232348	716.8871225029956	533.4660923204331	1.3980773466691532	1.1676223906269383	1.5795872253464385	1.6838760381157905	1.1570422569886136	1.4684555913440804	1.8130296688881749	1.0876950371846714	1.3438288446501458	1.0	9.059252764487441	-9.881706043288174	1.4590725047119144	1.0297913968815866	1.4466764405106074	0.26549084378630594	0.21897049765524368	0.5280856630338578	2.4558933803007554	0.2085346936143267	0.06297171288584792	1.3130883757458698e-10	9.881706043288174	0.4168850436290208	
SLDS(ph)DES(ph)EDEEDDYQQKR	ddPTM_K562_Methotrexat_30min_R1	1	SLDSDESEDEEDDYQQKR	18	1	Q13442	Q13442	PDAP1	28 kDa heat- and acid-stable phosphoprotein	2	S(0.023)LDS(0.974)DES(0.988)EDEEDDY(0.015)QQKR	89.01100000000001	0.0074451000000000005	89356000.0	2785.5	2135.2	4623.1	2794.1	2127.9	2096.8	1774.1	2525.6	2427.4	2754.7	True	False	2663.0527552635263	2488.0055078055425	3652.774488399596	2549.145591120107	2407.7561476803553	2501.9769244573336	2171.9870858792806	2436.7732164762915	2314.550703824977	2255.7971364112313	1.1805373418906815	1.1029384990548101	1.6192832367057743	1.1300420370138275	1.0673637752332983	1.1091320598259788	0.9628468140245603	1.0802271078120866	1.0260455900335157	1.0	11.139421616825654	-7.509885761199454	24.259286630239277	1.0493843992758403	1.2967117532880714	0.44148812188505504	0.1305425279273043	401.1040728262392	748904.3745191516	0.03760400422806551	0.05290148494494163	3.091108424835282e-08	7.509885761199454	0.24732735401223116	
SLDS(ph)DESEDEEDDY(ph)QQKR	ddPTM_K562_Methotrexat_30min_R1	1	SLDSDESEDEEDDYQQKR	18	1	Q13442	Q13442	PDAP1	28 kDa heat- and acid-stable phosphoprotein	2	S(0.102)LDS(0.871)DES(0.407)EDEEDDY(0.62)QQKR	63.302	0.016058000000000003	167910000.0	7140.7	4515.4	10508.0	8615.5	5375.7	5277.1	4932.9	6393.0	6805.2	8552.5	True	False	6826.80337803276	5261.493101323134	8302.514400316451	7860.192491426683	6082.698774888522	6296.824889380864	6039.228395205403	6168.1545664131045	6488.827737360852	7003.559374580555	0.9747619764331074	0.7512598694343541	1.1854706951511624	1.1223139650897058	0.8685153433503684	0.8990892419981779	0.8623084452064196	0.8807171091888568	0.9265042802252917	1.0	12.773872604855017	-7.806466374453354	24.999982442407013	0.8976758383515935	1.0027257943944372	0.16361525102406127	0.11198495572356255	249.99384184955898	138800.61617320086	0.036748646622164864	0.04166925725239129	1.5614699311645177e-08	7.806466374453354	0.10504995604284373	
SLEQYDQVLDGAHGAS(ph)LTDLANLSEGVSLAER	ddPTM_K562_Methotrexat_30min_R1	3	SLEQYDQVLDGAHGASLTDLANLSEGVSLAER	32	0	M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2;M0R3I1	M0R165	EPS15L1	Epidermal growth factor receptor substrate 15-like 1	1	SLEQYDQVLDGAHGAS(0.885)LT(0.104)DLANLS(0.011)EGVSLAER;SLEQYDQVLDGAHGAS(0.924)LT(0.068)DLANLS(0.007)EGVS(0.001)LAER;SLEQYDQVLDGAHGAS(0.938)LT(0.06)DLANLS(0.003)EGVSLAER	135.79	1.3387000000000002e-25	267718400.0	5243.73	4557.839999999999	4330.449999999999	5463.500000000001	4204.69	3693.4199999999996	4585.099999999999	5466.58	5854.52	6796.9	True	False	5013.221907865019	5310.945589966472	3421.5477241007193	4984.523437630978	4757.680434508253	4407.12114285063	5613.425391728249	5274.317282912957	5582.344643057346	5565.915546692385	0.9007003188979733	0.9541908326515245	0.614732238640239	0.8955442093606852	0.8547884700362663	0.7918052485488425	1.0085358544586789	0.9476100092907961	1.0029517329587805	1.0	12.442403303052693	-8.765916430045353	24.99945973782281	0.985408591369941	0.8342972547778694	0.4311647826514936	0.08686401898061132	117.47044421682244	655934.8997392536	0.03593718696500166	0.02515949513546901	1.71428715078868e-09	8.765916430045353	-0.15111133659207154	
SLGEKS(ph)PAASGAR	ddPTM_K562_Methotrexat_30min_R1	1	SLGEKSPAASGAR	13	1	O75683	O75683	SURF6	Surfeit locus protein 6	1	SLGEKS(0.862)PAAS(0.138)GAR	94.67299999999999	0.034002	0.0	1405.5	1285.6	2303.3	1842.3	1288.4	1099.5	1033.8	1327.5	1493.7	2073.7	True	False	1343.715902898181	1498.0235485363455	1819.8688064568773	1680.7884193552757	1457.847182983867	1311.9628140217662	1265.6559660571563	1280.8110725658375	1424.2582130276703	1698.1328354361526	0.7912902187967278	0.8821592264609791	1.0716881320944822	0.9897861841435849	0.8585000846588247	0.7725913937026007	0.7453221206526415	0.7542466913295808	0.8387201420917465	1.0	10.72973360193307	-7.9699810901472325	5.251153754212444	0.8029989667161335	0.939298337860135	0.21880039326508272	0.09593412998118603	0.2391145410918584	17.55423386454227	0.03133255784962725	0.03492695151401324	1.0715659618594968e-08	7.9699810901472325	0.13629937114400148	
SLGNILQAKPTS(ph)SPAKGPPQK	ddPTM_K562_Methotrexat_30min_R1	1	SLGNILQAKPTSSPAKGPPQK	21	2	Q13428;Q13428-3;Q13428-4;E7ETY2;Q13428-6;Q13428-7;Q13428-2;Q13428-8;A0A6I8PRA0;A0A3B3IS06;H0Y8Y7;Q13428-5	Q13428	TCOF1	Treacle protein	1	SLGNILQAKPT(0.016)S(0.492)S(0.492)PAKGPPQK	76.704	0.002526	17364000.0	3401.1	1966.2	6204.7	3787.1	2274.4	1802.9	1731.2	2833.2	2356.4	5282.7	True	False	3251.591716362151	2291.081130314377	4902.418262242431	3455.090822852068	2573.523465521971	2151.2849089584724	2119.465668831638	2733.554750126951	2246.8514783279124	4325.951839590381	0.7516476920996052	0.5296131846283607	1.1332577069805372	0.7986891558134467	0.594903401829285	0.4972974708757218	0.48994203990776003	0.6318967134839366	0.5193889256383086	1.0	12.078801888664964	-5.907474372760786	18.89584632438953	0.676829779382718	4.947730347576129	0.005343378666676779	0.21212385437904654	2022.9234843708634	416534.5553796652	0.0531806000297985	3044.5137205560773	1.2374442080012467e-06	5.907474372760786	4.270900568193411	
SLGNILQAKPTSS(ph)PAKGPPQK	ddPTM_K562_Methotrexat_30min_R1	1	SLGNILQAKPTSSPAKGPPQK	21	2	Q13428;Q13428-3;Q13428-4;E7ETY2;Q13428-6;Q13428-7;Q13428-2;Q13428-8;A0A6I8PRA0;A0A3B3IS06;H0Y8Y7;Q13428-5	Q13428	TCOF1	Treacle protein	1	SLGNILQAKPT(0.244)S(0.188)S(0.568)PAKGPPQK	57.735	0.022476	0.0	1266.4	710.26	2290.0	1372.5	620.41	589.3	620.85	1008.7	1147.4	1657.4	True	False	1210.730572344544	827.6183926442328	1809.3602947016252	1252.1750559437194	702.0047895024995	703.1738847685555	760.091416644018	973.2234492633969	1094.0576244412873	1357.228799465632	0.8920607732618353	0.6097854635637577	1.3331284271406607	0.9225968800814761	0.5172339326861417	0.5180953167552951	0.5600318950963029	0.7170666063426995	0.8060966764572338	1.0	10.406448233149156	-7.689737604163766	8.415244081465964	0.657833162561687	0.9456860864171781	0.24527664185381481	0.21391398036374346	0.3651536711795445	38.3741732189081	0.0642237853426356	0.08285375403771147	2.0429719124849144e-08	7.689737604163766	0.2878529238554911	
SLGS(ph)ASPGPGQPPLSSPTR	ddPTM_K562_Methotrexat_30min_R1	1	SLGSASPGPGQPPLSSPTR	19	0	Q9C0B5-2;Q9C0B5	Q9C0B5-2	ZDHHC5	Palmitoyltransferase ZDHHC5	1	S(0.29)LGS(0.47)AS(0.239)PGPGQPPLSSPTR	141.22	3.2973e-09	104910000.0	676.22	689.16	804.18	1035.0	554.39	587.68	549.89	613.71	590.85	787.04	True	False	646.4941784829657	803.0319762829095	635.3936077699357	944.2631569411659	627.3020023086201	701.2408426960536	673.2168303106688	592.1254714458605	563.3815124639482	644.4994294264696	1.0030950361868762	1.2459777924047435	0.9858714822065286	1.4651109276876342	0.9733166138980863	1.0880395089256747	1.044557682401293	0.9187369986856064	0.8741381089589062	1.0	9.332035271148358	-8.787706445674614	1.2569114248954083	0.921799594059659	1.1521097789557315	0.28367018916690767	0.1401169348574533	0.5626814586980485	1.7769911296770864	0.0887535948479254	0.049806952551802765	1.6303977012061509e-09	8.787706445674614	0.23031018489607247	
SLGS(ph)PLLHER	ddPTM_K562_Methotrexat_30min_R1	1	SLGSPLLHER	10	0	E7EV32;E7EMT6;E7ENY2;E7EVA2;E7EW82;H7C3L4;E7EQA9;Q92844	E7EV32	TANK	TRAF family member-associated NF-kappa-B activator	1	S(0.003)LGS(0.997)PLLHER	88.163	0.011942	11450000.0	3014.5	2553.2	3218.1	3639.4	2704.9	2301.7	2467.8	3020.9	2828.8	3020.6	True	False	2881.9861894603814	2975.0729030203797	2542.6647879385587	3320.339452533023	3060.641761295455	2746.47094955334	3021.2669694678384	2914.6532347375805	2697.289705437958	2473.5400697875502	1.1651261383074794	1.2027591302678617	1.0279456633815298	1.3423431029432258	1.2373528121411554	1.1103401893906781	1.2214344155448964	1.1783327346655503	1.0904572512826225	1.0	11.27236155509679	-9.970099286349045	2.4862617538611276	1.0007838282599004	1.1873992108740223	0.37330327258173135	0.07735472120011591	0.2869296110244386	4.046960559012945	0.07387417347850592	0.020188613628316955	1.0712743675645893e-10	9.970099286349045	0.18661538261412192	
SLGSAS(ph)PGPGQPPLSSPTR	ddPTM_K562_Methotrexat_30min_R1	1	SLGSASPGPGQPPLSSPTR	19	0	Q9C0B5-2;Q9C0B5	Q9C0B5-2	ZDHHC5	Palmitoyltransferase ZDHHC5	1	SLGS(0.042)AS(0.957)PGPGQPPLSSPTR	145.79	3.7896e-12	94019000.0	1194.8	1069.0	1494.3	1482.3	984.38	1159.1	1037.7	1329.0	1461.8	1596.3	True	False	1142.2780226131247	1245.6340801068397	1180.666850817746	1352.3490604192177	1113.8432241428586	1383.07967051626	1270.430640334214	1282.2583167156288	1393.841237064905	1307.1946015367373	0.8738393053874788	0.9529063833666945	0.9032066453072517	1.0345430273575158	0.8520867687438619	1.0580518530984693	0.9718756785261325	0.9809238159400342	1.0662844196467045	1.0	10.352258215216507	-6.22076600305882	0.308121931165989	1.0242021259056528	0.7865147393146402	0.33389509161083497	0.057775570778671584	9.32370188375241	0.7082016153101641	0.061106080096899267	0.8444512513654432	6.014977358886595e-07	6.22076600305882	-0.23768738659101263	
SLGSASPGPGQPPLS(ph)SPTR	ddPTM_K562_Methotrexat_30min_R1	3	SLGSASPGPGQPPLSSPTR	19	0	Q9C0B5-2;Q9C0B5	Q9C0B5-2	ZDHHC5	Palmitoyltransferase ZDHHC5	1	SLGSASPGPGQPPLS(0.494)S(0.494)PT(0.012)R;SLGSASPGPGQPPLS(0.499)S(0.499)PT(0.002)R;SLGSASPGPGQPPLS(0.481)S(0.481)PT(0.038)R	249.49	3.074099999999999e-84	21186200.0	5321.5	4643.7	6136.5	5127.9	5012.8	4662.4	4311.4	5396.3	5080.299999999999	5808.9	True	False	5087.573231784183	5410.992495596009	4848.532510234289	4678.344968578361	5672.071064003051	5563.3428140928445	5278.34119951521	5206.5090703480455	4844.1179618695005	4756.8519206081255	1.0695252483566438	1.1375154379210224	1.0192733747352898	0.9834960277637299	1.1924001752986926	1.169542989133371	1.1096290756178124	1.0945283051153787	1.0183453348386382	1.0	12.215791399992	-9.802912035647532	3.9154138987725235	1.0015998972842652	1.0984262583989721	0.2581440030020733	0.059894963906605043	0.3248820806787369	9.746740909321383	0.06047151205596219	0.01664770414753118	1.5743016997538747e-10	9.802912035647532	0.09682636111470688	
SLGSASPGPGQPPLSS(ph)PTRGGVK	ddPTM_K562_Methotrexat_30min_R1	1	SLGSASPGPGQPPLSSPTRGGVK	23	1	Q9C0B5-2;Q9C0B5	Q9C0B5-2	ZDHHC5	Palmitoyltransferase ZDHHC5	1	SLGSASPGPGQPPLS(0.074)S(0.91)PT(0.016)RGGVK	102.53	9.9416e-06	10402000.0	1232.2	774.44	1468.5	1296.9	885.46	629.72	963.97	953.78	829.74	1394.6	True	False	1178.0339633946205	902.4030467707588	1160.2819182398841	1183.2027905671473	1001.9135102801109	751.4044777133118	1180.1648109886985	920.2350167923502	791.1655685061118	1142.0244260496993	1.0315313197542362	0.7901784114129687	1.0159869541961883	1.036057341312642	0.8773135560206565	0.6579583243350101	1.033397170908969	0.8057927622226732	0.6927746468985606	1.0	10.157377792599192	-7.989922809143908	23.64304131823754	0.8302350364699563	0.9587999647235186	0.18758933023695834	0.1273692180143874	188.95054454270843	443308.0082612903	0.03894603105706789	0.04409940741797317	1.0234748870215254e-08	7.989922809143908	0.12856492825356225	
SLGSVQAPSYGARPVSSAASVY(ph)AGAGGSGSR	ddPTM_K562_Methotrexat_30min_R1	1	SLGSVQAPSYGARPVSSAASVYAGAGGSGSR	31	1	F8VZY9;P05783	F8VZY9	KRT18	Keratin, type I cytoskeletal 18	1	SLGSVQAPS(0.001)Y(0.001)GARPVS(0.028)S(0.028)AAS(0.087)VY(0.303)AGAGGS(0.259)GS(0.294)R	52.248999999999995	0.014605000000000002	17528000.0	793.36	740.31	739.2	891.23	806.19	844.31	604.74	906.96	987.0	1069.1	True	False	758.4848443424413	862.6336443815666	584.0520217656942	813.0972496238404	912.2181158411706	1007.46095816891	740.3683390533996	875.0617027301785	941.1145854310176	875.4756302091869	0.8663688835761292	0.9853314182776831	0.6671253906018382	0.9287491525372994	1.0419685989696874	1.1507584259406358	0.8456755545285657	0.9995271970289915	1.0749751940052825	1.0	9.773923210048999	-7.524047449447842	10.801142563000134	1.0139508099766257	0.8448149550634048	0.384636056915052	0.10184699644549645	0.10140591512466893	348.96692205096514	0.030108402578406763	0.04024367609938218	2.991937730430883e-08	7.524047449447842	-0.16913585491322092	
SLGSVQAPSYGARPVSSAASVYAGAGGS(ph)GSR	ddPTM_K562_Methotrexat_30min_R1	1	SLGSVQAPSYGARPVSSAASVYAGAGGSGSR	31	1	F8VZY9;P05783	F8VZY9	KRT18	Keratin, type I cytoskeletal 18	1	SLGSVQAPSYGARPVSSAAS(0.002)VY(0.001)AGAGGS(0.8)GS(0.197)R	77.02600000000001	7.0248e-06	15193000.0	653.36	520.71	818.17	705.86	507.66	480.27	515.99	645.46	570.17	767.09	True	False	624.6390767111747	606.7484769433428	646.4472979545976	643.9783497183494	574.426188228493	573.0753803458238	631.7138923639312	622.7588059497891	543.6629211501553	628.1625677459223	0.9943907975169689	0.965909954043551	1.0291082772956173	1.0251778485132916	0.9144546614576937	0.9123042501596815	1.0056535120052639	0.9913975106547277	0.8654812449283905	1.0	9.294994165021325	-7.753574547962374	24.99962348889641	0.9488614393054382	1.0027699195964006	0.27175231442522674	0.044437617325164824	263.0239115259518	836059.6661347301	0.013505552230282804	0.017112129673857814	1.763702993534035e-08	7.753574547962374	0.0539084802909624	
SLGTADVHFER	ddPTM_K562_Methotrexat_30min_R1	3	SLGTADVHFER	11	0	E9PB61;Q86V81	E9PB61	ALYREF	THO complex subunit 4	0	;;	160.72	4.8183999999999997e-08	128502700.0	20063.0	16825.6	21216.7	20450.4	17274.5	16935.0	17447.6	19567.1	19923.4	21603.9	False	True	19181.05454275788	19605.74441370032	16763.604613360687	18657.545183294318	19546.39953621143	20207.449072722684	21360.66844010335	18878.914002262143	18997.165482650813	17691.224363928788	1.0842129492103867	1.1082186292134255	0.9475661078348283	1.0546214778291882	1.1048641481290136	1.142230105561507	1.2074160612453884	1.067134394652468	1.0738185832623746	1.0	14.110746276229232														
SLGVLPFTLNSGS(ph)PEK	ddPTM_K562_Methotrexat_30min_R1	2	SLGVLPFTLNSGSPEK	16	0	P42695	P42695	NCAPD3	Condensin-2 complex subunit D3	1	SLGVLPFT(0.012)LNS(0.084)GS(0.904)PEK;SLGVLPFTLNS(0.059)GS(0.941)PEK	149.86	7.4214e-10	27631000.0	8339.8	5776.5	11226.7	7708.2	6450.9	5605.299999999999	5063.6	7652.0	8711.1	10508.8	True	False	7973.192377794561	6730.96844128827	8870.369091933071	7032.434073752558	7299.306420917903	6688.444894439473	6199.24119725964	7382.874822805109	8306.122862358803	8605.554487645968	0.9265169826349693	0.7821655711960418	1.0307725207791396	0.8171970886766491	0.8482087274441991	0.7772241642350095	0.7203767294901446	0.8579197114379877	0.9652048423239867	1.0	13.071052438090197	-9.794990790287422	3.870577926758414	0.9947873835636706	0.8411030415387731	0.31828076242273873	0.08134299839580808	0.2632212579170555	7.824262218637538	0.07725129557281049	0.021438289274049983	1.6032793897077962e-10	9.794990790287422	-0.15368434202489745	
SLHDALCVIR	ddPTM_K562_Methotrexat_30min_R1	1	SLHDALCVIR	10	0	E7ENZ3;B7ZAR1;E9PCA1;P48643-2;P48643	E7ENZ3	CCT5	T-complex protein 1 subunit epsilon	0		112.11	0.0036309	7597400.0	987.32	1027.8	1314.1	1133.1	867.96	934.29	1060.5	1317.9	1353.4	1593.8	False	True	943.9185949835876	1197.6264803871004	1038.2883682390407	1033.7628822512418	982.1119535413513	1114.8283197020426	1298.344120723171	1271.5487100071696	1290.4807294045986	1305.147375762232	0.7232275929239947	0.9176178128448235	0.795533429803404	0.7920660160294186	0.7524912295577183	0.8541781107677289	0.9947873664189932	0.9742568031940146	0.9887624596041747	1.0	10.349997008144266	-8.660172208507422	3.7916963196977407	0.9880497342636783	0.8026088224314648	0.7839627734260499	0.04786961319054161	0.10750991285671163	2.931288736958859	0.01932116296802888	0.014394984287248551	2.1868942943060855e-09	8.660172208507422	-0.18544091183221345	
SLHLS(ph)PQEQSASYQDR	ddPTM_K562_Methotrexat_30min_R1	3	SLHLSPQEQSASYQDR	16	0	Q5JW53;Q9H410-4;Q9H410	Q5JW53	DSN1	Kinetochore-associated protein DSN1 homolog	1	S(0.326)LHLS(0.674)PQEQSASYQDR;S(0.001)LHLS(0.999)PQEQSASYQDR;S(0.01)LHLS(0.969)PQEQS(0.02)AS(0.001)YQDR	130.47	8.507600000000001e-05	70856000.0	6943.4	6276.5	7984.1	7104.4	6293.400000000001	6209.2	5759.0	6857.7	6556.4	6847.6	True	False	6638.176449792413	7313.58494274143	6308.346519182201	6481.568282292576	7121.092410269068	7409.0400225774865	7050.602349122811	6616.510804018639	6251.5943950556475	5607.433285399336	1.1838172853660038	1.3042660644371071	1.124997159682293	1.1558886129183772	1.2699379640968722	1.3212890186084219	1.2573671393436292	1.179953548666686	1.1148762859709063	1.0	12.453124835569517	-9.939328408669452	1.8200137855861467	1.0025510070293078	1.2310971751423894	0.5970170642832533	0.05971200499851717	0.2454634302192829	1.820467386601031	0.06114902768546126	0.017516001241136576	1.149930495399878e-10	9.939328408669452	0.2285461681130816	
SLHLS(ph)PQEQSASYQDRR	ddPTM_K562_Methotrexat_30min_R1	1	SLHLSPQEQSASYQDRR	17	1	Q5JW53;Q9H410-4;Q9H410	Q5JW53	DSN1	Kinetochore-associated protein DSN1 homolog	1	S(0.001)LHLS(0.814)PQEQS(0.087)AS(0.074)Y(0.024)QDRR	69.612	0.024154	39725000.0	1481.9	1331.2	2123.0	2049.4	1594.9	1347.1	1379.7	1626.7	1815.1	1738.5	True	False	1416.7574503769579	1551.1581734688732	1677.4113125115935	1869.7322838987689	1804.6573052941392	1607.4080097941983	1689.132846168561	1569.4880389776627	1730.716397179169	1423.6408035905642	0.995164964929183	1.089571308687344	1.1782545908216417	1.313345528719827	1.2676352776224264	1.129082564745373	1.186488081760792	1.1024466529894739	1.2156973815404346	1.0	10.475369472927383	-12.202573192063245	17.89095083556758	1.0000001148610347	1.1676436193200663	0.2421713639353995	0.08694022080364819	0.0	0.0	0.09073852260919159	0.022007324295893717	6.272299794093788e-13	12.202573192063245	0.16764350445903164	
SLHLSPQEQS(ph)ASYQDRR	ddPTM_K562_Methotrexat_30min_R1	1	SLHLSPQEQSASYQDRR	17	1	Q5JW53;Q9H410-4;Q9H410	Q5JW53	DSN1	Kinetochore-associated protein DSN1 homolog	1	SLHLS(0.067)PQEQS(0.883)AS(0.046)Y(0.003)QDRR	82.859	0.008741	356580000.0	830.6	609.82	777.46	787.32	546.89	724.96	706.5	588.28	823.41	868.55	True	False	794.0878185323584	710.5823898323237	614.2817706195308	718.2968779931582	618.8156208491516	865.0482598028368	864.9506094209529	567.5898589597215	785.1298488244727	711.2471785784206	1.1164723635452762	0.9990653196720924	0.8636684813953204	1.0099117432406943	0.8700429885514439	1.2162413937891754	1.2161040992102652	0.7980205420205265	1.1038776285815606	1.0	9.47420721422875	-8.239121544393866	24.981082207752234	1.0635535179990538	0.96945158457249	0.11807853383255595	0.12959914174986792	1955.2763866281407	2188606.8772383505	0.04417056528307371	0.044133278629669793	5.766050684762783e-09	8.239121544393866	-0.09410193342656381	
SLIEEGGDWDRR	ddPTM_K562_Methotrexat_30min_R1	3	SLIEEGGDWDRR	12	1	Q15008-4;C9J0E9;Q15008;H7C531;Q15008-3;Q15008-2	Q15008-4	PSMD6	26S proteasome non-ATPase regulatory subunit 6	0	;;	205.52	2.7241999999999996e-11	262660000.0	5554.500000000001	5098.400000000001	6387.200000000001	5750.8	5243.099999999999	4891.6	4883.5	5748.800000000001	5067.200000000001	6171.5	False	True	5310.330830770507	5940.823942017506	5046.6140062524955	5246.636292692999	5932.659550685119	5836.832470276372	5978.749187695995	5546.611445549145	4831.626978010188	5053.78154694229	1.05076382535439	1.1755205259340713	0.9985817470297799	1.0381604831865738	1.1739050245008276	1.1549435637572927	1.1830248561719772	1.0975170560953578	0.9560419129975032	1.0	12.303147588842984	-12.796163126206235	6.5563859743714294	0.9955174408506866	1.0972655953458907	0.1128664988418967	0.07616912604381829	0.005365173029003788	0.00016680214214892717	0.07928242566004219	0.018464884234625157	1.5989573282933855e-13	12.796163126206235	0.10174815449520414	
SLIPDIKPLAGQEAVVDLHADDS(ph)RISEDETER	ddPTM_K562_Methotrexat_30min_R1	1	SLIPDIKPLAGQEAVVDLHADDSRISEDETER	32	2	S4R3H4;E7EQT4;Q9UKV3;G3V3B0;Q9UKV3-3;Q9UKV3-2	S4R3H4	ACIN1	Apoptotic chromatin condensation inducer in the nucleus	1	SLIPDIKPLAGQEAVVDLHADDS(0.711)RIS(0.276)EDET(0.013)ER	69.857	2.2968e-05	37090000.0	2382.3	1692.2	3148.9	2443.6	1892.4	1739.5	1558.6	2267.8	2133.6	2745.1	True	False	2277.576944485476	1971.8072875180505	2487.9889222646043	2229.3733819337504	2141.2837698530516	2075.633756244531	1908.1557251854165	2188.040188598724	2034.4094016976892	2247.935789437134	1.0131859438279434	0.877163527883408	1.1067882516731395	0.9917424654251216	0.9525555756150902	0.9233509987241467	0.8488479671668931	0.9733552883850799	0.9050122388981091	1.0	11.134385111331403	-7.926151013024957	3.2040745127509	0.9241817779515458	0.9963222032806911	0.194330137050861	0.06397121761398084	0.4019240306362251	8.340088689215337	0.020939787716709454	0.02377757831214336	1.1853565039317574e-08	7.926151013024957	0.07214042532914533	
SLIPDIKPLAGQEAVVDLHADDSRISEDET(ph)ERNGDDGTHDK	ddPTM_K562_Methotrexat_30min_R1	1	SLIPDIKPLAGQEAVVDLHADDSRISEDETERNGDDGTHDK	41	3	S4R3H4;E7EQT4;Q9UKV3;G3V3B0;Q9UKV3-3;Q9UKV3-2	S4R3H4	ACIN1	Apoptotic chromatin condensation inducer in the nucleus	1	SLIPDIKPLAGQEAVVDLHADDS(0.038)RIS(0.038)EDET(0.902)ERNGDDGT(0.021)HDK	52.376999999999995	0.00026853	39370000.0	3726.4	2254.9	5932.4	4062.3	2620.8	1748.4	2059.9	3159.3	2848.2	4954.0	True	False	3562.5919178653758	2627.4838982534266	4687.270311042756	3706.16446612763	2965.4811371966157	2086.2535552848162	2521.885011105761	3048.1856282917133	2715.7878036723655	4056.7825947585034	0.8781816216792987	0.6476767824946356	1.155415702359516	0.913572364197213	0.7309933593750167	0.5142630906522633	0.6216465763691945	0.7513800794329155	0.6694437624489054	1.0	11.986120274446119	-7.833254050550835	4.990333424261557	0.6841396071992091	0.8990526663956393	0.2243227325669298	0.16353558050491923	0.2793228754647848	12.87406640457102	0.05123576058270172	0.05925411922052246	1.468067246695431e-08	7.833254050550835	0.21491305919643022	
SLLERY(ph)LT(ph)AAT(ph)AS(ph)VGSGVPVLS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SLLERYLTAATASVGSGVPVLSR	23	1	O60522-2;O60522	O60522-2	TDRD6	Tudor domain-containing protein 6	5	S(0.12)LLERY(0.932)LT(0.95)AAT(0.993)AS(0.991)VGS(0.137)GVPVLS(0.876)R	46.101000000000006	0.026633999999999998	46693000.0	0.0	0.0	0.0	50.275	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	45.867468806973044	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
SLLGDSAPTLHLNKGT(ph)PS(ph)QSPVVGR	ddPTM_K562_Methotrexat_30min_R1	1	SLLGDSAPTLHLNKGTPSQSPVVGR	25	1	C9J2I0;B8ZZY2;P52594-2;P52594-3;P52594;P52594-4	C9J2I0	AGFG1	Arf-GAP domain and FG repeat-containing protein 1	2	SLLGDSAPT(0.007)LHLNKGT(0.948)PS(0.601)QS(0.445)PVVGR	63.883	0.0026165	66050000.0	4240.8	3336.3	5711.0	4267.7	3515.5	3203.9	3037.7	4538.0	4030.1	6249.1	True	False	4054.379509790542	3887.5668675963066	4512.33914543274	3893.5573670317035	3977.849869434791	3823.008330917995	3718.9815516461827	4378.395967837112	3842.741530643916	5117.327434982911	0.7922845589426469	0.7596869492892414	0.8817765137688144	0.7608575797621803	0.777329557268808	0.7470712748969838	0.7267429334739457	0.8556020742205513	0.7509274283240679	1.0	12.32117483259138	-12.22034843337907	3.2289487960841545	1.0006532852430556	0.7842912783222277	0.6604783344108334	0.04654649087827931	13764388.482864741	20136840.300399162	90735.85405373483	0.01203244564522951	6.020763478984198e-13	12.22034843337907	-0.21636200692082797	
SLLPLSTS(ph)LDHR	ddPTM_K562_Methotrexat_30min_R1	2	SLLPLSTSLDHR	12	0	Q8TEQ6	Q8TEQ6	GEMIN5	Gem-associated protein 5	1	SLLPLST(0.318)S(0.682)LDHR;SLLPLST(0.049)S(0.951)LDHR	142.95	7.3125e-07	12048100.0	3465.7	2865.5	4766.5	3581.3999999999996	3386.2	3497.4	3480.0	3922.7	3390.4	3755.2000000000003	True	False	3313.3519777120086	3338.975169828019	3766.0767880765443	3267.424222482214	3831.544653073555	4173.223052077968	4260.478585682823	3784.736417592473	3232.7810440175526	3075.09689136801	1.077478887580029	1.0858113704321746	1.2247018292815939	1.062543502825579	1.2459915210570898	1.3571029465095772	1.3854778357203164	1.2307698102835283	1.051277783504049	1.0	11.586416152835563	-7.77682829088135	24.60167130822083	1.2392605486509856	1.1187228589747538	0.11524045826995277	0.12047354933572377	347.85592119810923	556101.2468902438	0.03817761775395318	0.04345359760390051	1.67175145215399e-08	7.77682829088135	-0.1205376896762318	
SLLSHEFQDET(ph)DTEEETLYSSKH	ddPTM_K562_Methotrexat_30min_R1	1	SLLSHEFQDETDTEEETLYSSKH	23	1	O75976-2;O75976	O75976-2	CPD	Carboxypeptidase D	1	SLLSHEFQDET(0.5)DT(0.5)EEETLYSSKH	94.234	0.00023398	15115000.0	2141.5	1747.7	1712.5	2055.4	1449.2	1412.9	1475.3	1461.4	1702.3	2386.2	True	False	2047.3622241596977	2036.477719179349	1353.0696526971747	1875.2062732143688	1639.7952014748673	1685.9229285414765	1806.1735797292727	1410.0017336705946	1623.1604445584812	1954.0360572492402	1.0477607189305584	1.0421904506952469	0.6924486616700075	0.9596579685710392	0.839183696427414	0.862790081220305	0.9243297087730723	0.7215842964819695	0.8306706718828192	1.0	10.93224137383876	-6.68013963306759	12.587531171698012	0.8500068585413639	1.0456634232948954	0.41563091879546543	0.09056978483583276	0.6000565782931725	90.47156463803933	0.02180180397278106	0.057703139738463916	2.0886244945653482e-07	6.68013963306759	0.19565656475353144	
SLLSHEFQDETDT(ph)EEETLYSSKH	ddPTM_K562_Methotrexat_30min_R1	1	SLLSHEFQDETDTEEETLYSSKH	23	1	O75976-2;O75976	O75976-2	CPD	Carboxypeptidase D	1	SLLSHEFQDET(0.374)DT(0.625)EEETLYSSKH	97.589	4.6213e-05	11895000.0	1488.6	1217.6	1934.3	1497.3	1058.8	936.81	1113.1	1389.6	1400.3	1702.2	True	False	1423.1629263993113	1418.7877043387182	1528.3168637735153	1366.0340337082189	1198.0507585713426	1117.8352740370437	1362.7410096906756	1340.7269803672218	1335.2003586413916	1393.9150853447568	1.0209825127527914	1.0178437117550885	1.0964203485863824	0.9799980271899833	0.8594861847520855	0.8019392901258183	0.9776355991969403	0.9618426505769683	0.9578778310668449	1.0	10.444926962307909	-7.520989823530141	9.887135813833435	0.9207407431731335	1.0417269447763056	0.44914948549344413	0.05869068855012342	0.09537360090595175	184.00464306292804	0.018302932271944624	0.024737342506866194	3.01307662633629e-08	7.520989823530141	0.12098620160317208	
SLNERAET(ph)PPLPIPPPPPDIQPLER	ddPTM_K562_Methotrexat_30min_R1	2	SLNERAETPPLPIPPPPPDIQPLER	25	1	U3KPW8;A0A669KB72;Q8IX15;Q8IX15-3	U3KPW8	HOMEZ	Homeobox and leucine zipper protein Homez	1	S(0.003)LNERAET(0.997)PPLPIPPPPPDIQPLER;S(0.05)LNERAET(0.95)PPLPIPPPPPDIQPLER	113.43	2.0732e-07	83534000.0	1694.3	1387.92	1736.63	2110.13	1417.3400000000001	1471.65	1669.33	1464.53	1608.07	2119.92	True	False	1619.8206006975363	1617.2501893937194	1372.1350954531367	1925.1381790881771	1603.7450530350463	1756.0255345658315	2043.719746390202	1413.021649796493	1533.3111766910408	1735.9819455551963	0.9330860870096724	0.9316054199379911	0.790408620876702	1.1089620972253174	0.923825882602795	1.0115459662826303	1.177270162067605	0.8139610284625309	0.8832529512285118	1.0	10.761536228300798	-7.253092560912286	24.99571393997942	0.9867940553045741	0.8896905937982069	0.16884609458807642	0.10490337600348688	1283.0477117095998	3842259.0699316636	0.029534647459736087	0.05010550470575768	5.583511810153625e-08	7.253092560912286	-0.09710346150636717	
SLNFQEDDDTSRET(ph)FASDTNEALASLDESQEGHAEAK	ddPTM_K562_Methotrexat_30min_R1	1	SLNFQEDDDTSRETFASDTNEALASLDESQEGHAEAK	37	1	Q9H814	Q9H814	PHAX	Phosphorylated adapter RNA export protein	1	S(0.007)LNFQEDDDT(0.185)S(0.185)RET(0.219)FAS(0.219)DT(0.093)NEALAS(0.09)LDES(0.001)QEGHAEAK	54.376000000000005	0.0015148	17739000.0	548.16	283.57	704.53	467.62	505.41	327.25	333.35	550.17	433.58	805.45	True	False	524.0635427482513	330.4251226341411	556.6587809721113	426.624480626887	571.8802737906523	390.4864310037498	408.11222314292223	530.8202092606751	413.42296043685997	659.5752000299224	0.794547070181651	0.5009665654790401	0.843965602325342	0.6468170431628307	0.867043323891966	0.592027157761594	0.6187501032852778	0.8047910370744593	0.6268018573440974	1.0	9.365393344361996	-12.260195571231323	4.060885075157064	1.0002975311729618	0.6988673563021255	0.3764085540598925	0.11602244929344398	4409835336.3785925	4385903824.198781	14523441.80076098	0.02704421935231212	5.492934606516742e-13	12.260195571231323	-0.30143017487083634	
SLPAGDALY(ph)LSFNPPQPSR	ddPTM_K562_Methotrexat_30min_R1	1	SLPAGDALYLSFNPPQPSR	19	0	V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF0	V9GYM8;V9GYF0	ARHGEF2	Rho guanine nucleotide exchange factor 2	1	S(0.106)LPAGDALY(0.71)LS(0.184)FNPPQPSR	76.262	0.0088488	16113000.0	311.96	281.51	358.69	618.47	402.01	221.18	268.27	478.47	346.13	550.93	True	False	298.24661193035706	328.02474264815396	283.40587078887586	564.2496953366211	454.8813614027819	263.9199046887986	328.4363764888307	461.6419389006224	330.03849184927884	451.15123837914825	0.6610790053505519	0.7270837686861926	0.6281837368042446	1.2506885659092988	1.008268010162257	0.5849920874360981	0.7279961763350237	1.0232531790429393	0.7315473477031974	1.0	8.81746733563608														
SLPAS(ph)PSTSDFCQTR	ddPTM_K562_Methotrexat_30min_R1	2	SLPASPSTSDFCQTR	15	0	Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8;S4R2Y6	Q9Y2D8-2	SSX2IP	Afadin- and alpha-actinin-binding protein	1	S(0.002)LPAS(0.785)PS(0.168)T(0.016)S(0.029)DFCQTR;SLPAS(0.901)PS(0.061)T(0.019)S(0.019)DFCQTR	121.95	0.00062672	70340800.0	2144.66	1943.2800000000002	3677.0	2701.7	2319.19	2475.45	1963.02	2756.66	2209.38	2661.56	True	False	2050.383314343375	2264.3739898877666	2905.2479491781087	2464.8461556598536	2624.2041355979154	2953.7956780083477	2403.27720496181	2659.7067053102382	2106.6664060380776	2179.5256929562847	0.9407474850926201	1.0389297071402699	1.3329725630522218	1.1309094284254861	1.2040253271978978	1.3552470097298333	1.102660644345069	1.2203144536931985	0.966571035545178	1.0	11.089798495411642	-9.767444679786541	24.999017594366883	0.9832853952805732	1.1714054879847806	0.2731351844304446	0.11875827066887115	208.08443972279588	866177.0995380135	0.10769536341375585	0.030659025510677573	1.708265304179888e-10	9.767444679786541	0.18812009270420738	
SLPAT(ph)PQGK	ddPTM_K562_Methotrexat_30min_R1	1	SLPATPQGK	9	0	Q13111;Q13111-3;Q13111-2;K7EPA1	Q13111	CHAF1A	Chromatin assembly factor 1 subunit A	1	S(0.044)LPAT(0.956)PQGK	108.9	0.012019	33157000.0	4931.9	3838.4	6809.4	5911.9	4046.0	3427.2	3543.4	4371.4	4160.6	6141.4	True	False	4715.099581290314	4472.6303583555655	5380.199995956873	5393.612905816888	4578.119918001186	4089.457895602905	4338.097649571415	4217.655384266892	3967.1746141279573	5029.132948617252	0.9375571553714283	0.889344227733193	1.0698066746149844	1.0724737168262473	0.91031992289246	0.813153666324787	0.8625935511933851	0.8386446386203662	0.7888386834590886	1.0	12.296093977226834	-7.9847419506373685	8.866487268925702	0.8518404300710274	0.9907618658851106	0.4153512763044839	0.07331449873204976	0.1848675225312751	89.10472391841245	0.023462369498945815	0.026211861075390717	1.035757410854209e-08	7.9847419506373685	0.13892143581408323	
SLPSSSQLKGS(ph)PQAISR	ddPTM_K562_Methotrexat_30min_R1	2	SLPSSSQLKGSPQAISR	17	1	Q8WYP5;Q8WYP5-3;Q8WYP5-2	Q8WYP5	AHCTF1	Protein ELYS	1	SLPS(0.019)S(0.046)S(0.257)QLKGS(0.677)PQAISR;SLPSSS(0.008)QLKGS(0.966)PQAIS(0.027)R	214.63	9.2252e-23	107440000.0	2607.6000000000004	2149.6	3179.0	2921.6	2113.25	1680.1	1615.55	2309.8999999999996	2233.8999999999996	2551.3999999999996	True	False	2492.9730262520798	2504.7848630473945	2511.771343605443	2665.4678640766288	2391.179415896195	2004.7555469194808	1977.8782123850249	2228.659507736217	2130.0464765900206	2089.3167364285105	1.1932001418385139	1.1988535866175503	1.2021974934729516	1.2757605477439453	1.1444791372243974	0.9595268692225292	0.9466626949851658	1.0666929857393954	1.0194942870323882	1.0	11.028815503460716	-8.094178955542857	4.191692195290379	1.000426846203867	1.215006303041487	0.8826699980188861	0.03792767327904042	0.07932270157519154	2.454509043779307	0.013687092493287865	0.013909370906648687	8.050466450291093e-09	8.094178955542857	0.21457945683762003	
SLPTTVPES(ph)PNYR	ddPTM_K562_Methotrexat_30min_R1	8	SLPTTVPESPNYR	13	0	Q6PKG0;A0A0B4J210;Q6PKG0-3;E5RH50;H0YC33	Q6PKG0	LARP1	La-related protein 1	1	SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR	274.45	3.4978999999999997e-122	6018506000.0	20188.600000000002	18485.899999999998	25682.799999999996	21915.6	19227.0	19007.4	18395.899999999998	20744.700000000004	20899.3	22877.800000000003	True	False	19301.13331714708	21540.38076842568	20292.33125622832	19994.293374164066	21755.687509493033	22680.311042507798	22521.64885470192	20015.097142792114	19927.696104659037	18734.4087295854	1.0302504656400875	1.1497763862923032	1.0831583504518425	1.0672497682080062	1.1612689689606497	1.21062326384985	1.202154238213865	1.068360225918646	1.0636949578872588	1.0	14.193402825518808	-9.7861793494398	2.1138537503362183	1.0094414747687515	1.1294211186306962	0.3360212588203043	0.05604799783672417	0.36322253786562025	3.1519522407411538	0.056522473781609524	0.01623846731385121	1.636140709206007e-10	9.7861793494398	0.11997964386194471	
SLPTTVPES(ph)PNYRNTR	ddPTM_K562_Methotrexat_30min_R1	1	SLPTTVPESPNYRNTR	16	1	Q6PKG0;A0A0B4J210;Q6PKG0-3;E5RH50;H0YC33	Q6PKG0	LARP1	La-related protein 1	1	SLPTTVPES(0.987)PNY(0.007)RNT(0.006)R	132.15	0.00014157	12658000.0	1842.6	1451.7	2311.8	3571.4	1316.1	1620.6	1693.0	1517.9	1242.2	2555.9	True	False	1761.6015102669442	1691.568750319084	1826.58477261625	3258.3009069562136	1489.1902185075035	1933.7580140097077	2072.6983464255804	1464.514596646089	1184.450393133141	2093.0017428226183	0.8416627058758449	0.808202265535545	0.8727105836772601	1.5567597677019012	0.7115093064849455	0.9239161030997735	0.9902993886810353	0.6997197215283	0.5659098933839364	1.0	11.03135779757463	-9.262074847609892	24.974206781798017	0.7246110914878332	0.9610876340755912	0.12829104395091195	0.23800024016537033	106.59955204378998	4189185.614121777	0.12246784693198089	0.0643553265023	5.46921696650217e-10	9.262074847609892	0.23647654258775797	
SLQEEQSRPPTAVS(ph)SPGGPAR	ddPTM_K562_Methotrexat_30min_R1	1	SLQEEQSRPPTAVSSPGGPAR	21	1	A0A087X0M4;Q9BWU0	A0A087X0M4	SLC4A1AP	Kanadaptin	1	SLQEEQSRPPT(0.002)AVS(0.619)S(0.379)PGGPAR	111.45	0.00011432	0.0	1716.3	1255.5	2032.5	1728.4	1480.4	1394.4	1268.6	1771.4	1975.0	1766.7	True	False	1640.853507039593	1462.9500351488657	1605.9060257559179	1576.8738555141167	1675.0985483462566	1663.8480653678498	1553.115843045181	1709.0988579609216	1883.182681080304	1446.7335103269777	1.1341781297847604	1.011209061451976	1.1100220007988655	1.0899546075750508	1.1578487236171546	1.1500722513794555	1.073532777086334	1.181350155893359	1.3016790360062125	1.0	10.498583485220877	-7.704068883864268	4.8736480604728305	1.1499968445646698	1.0813603337907256	0.11243100042429721	0.07808499941134626	0.411702056073553	19.882152212537967	0.0233241554633609	0.029827713255151024	1.976656095927734e-08	7.704068883864268	-0.06863651077394417	
SLQEEQSRPPTAVSS(ph)PGGPAR	ddPTM_K562_Methotrexat_30min_R1	1	SLQEEQSRPPTAVSSPGGPAR	21	1	A0A087X0M4;Q9BWU0	A0A087X0M4	SLC4A1AP	Kanadaptin	1	SLQEEQS(0.001)RPPT(0.003)AVS(0.347)S(0.648)PGGPAR	56.972	0.021688	43411000.0	478.32	530.55	656.03	549.05	711.84	561.11	498.53	539.51	597.37	603.3	True	False	457.2936255241966	618.2143696919404	518.3382681803957	500.91563895511763	805.4594370810582	669.5365662353369	610.3380429081776	520.5351275028207	569.5983990870586	494.036523903473	0.9256271619576545	1.2513535736332115	1.0491901774486434	1.0139243046187993	1.6303641494296328	1.3552369791310284	1.235410771021108	1.0536369323263337	1.1529479532941358	1.0	8.948473893338901	-6.255217578322805	23.300734135764383	1.205123685265353	0.925626829876236	0.15913797878074343	0.18304008033302255	527.7851431402444	1976412.5518065696	0.04814662859802089	0.4198100214447641	5.556258231022831e-07	6.255217578322805	-0.27949685538911706	
SLQSVAEER	ddPTM_K562_Methotrexat_30min_R1	1	SLQSVAEER	9	0	E7EX53;A0A2R8Y738;A0A2R8YEM3;E7EQV9;P61313-2;P61313	E7EX53	RPL15	Ribosomal protein L15;60S ribosomal protein L15	0		131.12	0.010289	20587000.0	1899.3	2072.4	2278.0	2012.6	2057.8	1568.0	1617.7	1674.2	1916.1	2064.4	False	True	1815.809046157607	2414.8288752230283	1799.8789307119205	1836.158482763081	2328.436768972525	1870.9938084457729	1980.5104046146837	1615.3174370544064	1827.0209292242882	1690.5171555549969	1.0741145336448696	1.4284557049823252	1.0646913134229745	1.0861519368374999	1.3773517537644266	1.1067582498632056	1.171541145327497	0.9555167374353546	1.0807467544595708	1.0	10.723248941596443	-9.158755012897787	4.966687850806456	1.0143240341962125	1.194108010855509	0.30312892946522974	0.12137497528951978	0.2755217111233036	10.53082058693192	0.05795287473857078	0.03260671559299125	6.938170803936987e-10	9.158755012897787	0.17978397665929657	
SLQVVDLES(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SLQVVDLESR	10	0	H0YMT3;Q6P4I2	H0YMT3	WDR73	WD repeat-containing protein 73	1	SLQVVDLES(1)R	95.094	0.007443399999999999	4875800.0	210.17	204.26	321.65	218.61	174.97	51.033	138.86	276.03	271.98	234.86	True	False	200.9311784504524	238.01049317364198	254.14006060732623	199.44480071392104	197.98162186175657	60.89440499133493	170.00288977238986	266.32186844470647	259.33570916466897	192.324578160069	1.0447503921377135	1.237545900012578	1.3214122866595297	1.0370219065185002	1.0294140445064661	0.31662310440974106	0.8839374114259015	1.3847521257686086	1.348427287066906	1.0	7.587399333751637	-7.449345703742274	4.995664920478554	0.977908538377898	1.204418424983285	0.09655518225388104	0.2815485733891539	0.5636493780904386	25.888562734348913	0.09070863693834168	0.13446678226612943	3.553483443114226e-08	7.449345703742274	0.22650988660538696	
SLS(ph)ASPALGSTK	ddPTM_K562_Methotrexat_30min_R1	1	SLSASPALGSTK	12	0	O95544;O95544-2	O95544	NADK	NAD kinase	1	SLS(0.964)AS(0.035)PALGSTK	94.68799999999999	0.01277	15796000.0	3210.7	2022.2	4051.7	3179.5	1924.8	2142.2	1924.7	2600.1	2463.4	3710.9	True	False	3069.5614723836284	2356.3341784771314	3201.303539756581	2900.7581714922107	2177.944937757953	2556.1498319212596	2356.362969501071	2508.65300924929	2348.877071682643	3038.820050643786	1.0101162363113043	0.7754108960739327	1.053469269783965	0.9545672738593631	0.7167074395525812	0.8411652514204416	0.7754203704829005	0.8255352299382853	0.7729569479393898	1.0	11.569295530193445	-7.7350596580727515	24.909980517190057	0.8118738146688526	0.9435408793547382	0.2876740190072127	0.09656185705695293	259.7037722019477	245233.2799495243	0.026957638518280078	0.03479109333449421	1.8405191560558764e-08	7.7350596580727515	0.13166706468588563	
SLS(ph)DSESDDSK	ddPTM_K562_Methotrexat_30min_R1	2	SLSDSESDDSK	11	0	Q13185;S4R2Y4	Q13185	CBX3	Chromobox protein homolog 3	1	S(0.002)LS(0.776)DS(0.214)ES(0.008)DDSK;S(0.011)LS(0.858)DS(0.13)ES(0.001)DDSK	187.78	0.00010999	93298000.0	6190.3	3711.97	8780.9	5924.7	4052.82	3876.7200000000003	3613.1899999999996	4956.36	4909.22	6557.7	True	False	5918.1818240559305	4325.3099497981175	6937.909088098466	5405.290749690169	4585.836867541661	4625.84127364662	4423.539833621644	4782.042009508411	4680.991433728125	5370.036984587776	1.1020746860852826	0.8054525438487542	1.2919667235087107	1.0065649017322549	0.8539674644147144	0.8614170231830753	0.8237447612218283	0.8905044831596255	0.8716870008833758	1.0	12.39071630905483	-7.662598233357001	5.030024023836282	0.8743380241615339	1.0563399688797492	0.32959031041746967	0.11846620214228323	0.24045834856191442	9.88117588879941	0.034617164694417786	0.04479465337176332	2.1747120788158286e-08	7.662598233357001	0.1820019447182153	
SLS(ph)EQPVMDTATATEQAK	ddPTM_K562_Methotrexat_30min_R1	1	SLSEQPVMDTATATEQAK	18	0	A2ABK4;A0A0G2JI50;E9PD43;A0A0A0MT02;A0A0A0MSN9;P18615-4;P18615;P18615-3	A2ABK4	NELFE	Negative elongation factor E	1	S(0.122)LS(0.809)EQPVMDT(0.068)AT(0.001)ATEQAK	125.51	4.1848e-05	20220000.0	2785.3	1790.5	2880.4	2405.8	1465.7	1454.5	1216.8	1760.6	1846.8	2558.2	True	False	2662.8615470240525	2086.3496917037405	2275.843402995002	2194.887249245466	1658.4652406856992	1735.5615397859563	1489.6983744422005	1698.6787000824208	1760.9426710982812	2094.8851905351635	1.2711252908059332	0.9959255529276798	1.0863809688843191	1.0477362956032716	0.7916735715058564	0.8284757310936864	0.711112179881151	0.810869592165322	0.8405914935359428	1.0	11.032655464346012	-7.68739570222222	4.225403758304306	0.8143609158872283	1.0998730313448593	0.6665608696017217	0.09360347406135891	0.12450216191599339	4.2630132086052885	0.027425007623670446	0.03530324688909335	2.0540182489726897e-08	7.68739570222222	0.285512115457631	
SLS(ph)ESSVIMDR	ddPTM_K562_Methotrexat_30min_R1	5	SLSESSVIMDR	11	0	H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BNX5	H3BSS6	ZNF106	Zinc finger protein 106	1	S(0.007)LS(0.981)ES(0.006)S(0.006)VIMDR;S(0.001)LS(0.894)ES(0.053)S(0.053)VIMDR;S(0.001)LS(0.701)ES(0.149)S(0.149)VIMDR;SLS(0.996)ES(0.003)S(0.001)VIMDR;S(0.007)LS(0.929)ES(0.032)S(0.032)VIMDR	103.43	0.0037728	299820000.0	19298.7	17372.800000000003	21783.899999999998	19598.5	16942.5	15922.399999999998	15638.5	18572.6	18507.499999999996	21037.7	True	False	18450.3522556109	20243.359912890664	17211.757084607296	17880.32993363423	19170.73571693898	18999.178453824607	19145.831713276108	17919.3911309501	17647.09036460442	17227.568670518955	1.0709783027702835	1.1750561150008676	0.9990821928378834	1.0378905042028552	1.1127940386472126	1.1028357406194733	1.1113484484923182	1.0401578698458502	1.0243517644369273	1.0	14.07243148770011	-9.501196252050864	3.2937734249200696	1.013807516054653	1.086728568245279	0.3204340024950082	0.04479425728581115	0.3243662496511617	7.115338834238086	0.033699059412351275	0.012475693871714868	3.1535792397332224e-10	9.501196252050864	0.07292105219062606	
SLS(ph)FSDEMSSCR	ddPTM_K562_Methotrexat_30min_R1	4	SLSFSDEMSSCR	12	0	Q14153-2;Q14153	Q14153-2	FAM53B	Protein FAM53B	1	S(0.002)LS(0.917)FS(0.076)DEMS(0.005)SCR;SLS(0.989)FS(0.01)DEMSSCR;S(0.002)LS(0.595)FS(0.348)DEMS(0.047)S(0.009)CR;S(0.001)LS(0.807)FS(0.193)DEMSSCR	106.26	0.0029833999999999998	58709000.0	7825.0	6391.800000000001	9217.0	7683.7	6658.099999999999	7132.5	6428.2	7900.4	7446.7	8064.299999999999	True	False	7481.022369390446	7447.936307976522	7282.4776577575885	7010.081950713849	7533.756852704813	8510.754680318545	7869.887484047796	7622.538454010648	7100.504542380103	6603.777125335279	1.1328399228813508	1.1278297505533068	1.1027745969527782	1.06152612628609	1.1408254260734636	1.288770732081066	1.1917251801026272	1.1542694899206862	1.0752186828260961	1.0	12.689075715391848	-9.98533626151531	3.0462987757491655	1.0006828222957136	1.150477410813746	0.41743460596890214	0.05660966242803806	0.25452672925710795	5.5870736000539845	0.0618794505383727	0.016565900796329126	1.0343409965763201e-10	9.98533626151531	0.1497945885180325	
SLS(ph)GSPLK	ddPTM_K562_Methotrexat_30min_R1	2	SLSGSPLK	8	0	Q9UIG0-2;Q9UIG0	Q9UIG0-2	BAZ1B	Tyrosine-protein kinase BAZ1B	1	S(0.02)LS(0.792)GS(0.188)PLK;S(0.022)LS(0.926)GS(0.052)PLK	112.3	0.0098566	105213000.0	7544.1	6031.1	11626.1	6468.6	5889.799999999999	5201.8	4781.1	7683.9	7034.0	8421.8	True	False	7212.470397050286	7027.636763828218	9185.940490057008	5901.507881149397	6664.411935996882	6206.974230084962	5853.3833810368205	7413.652881724022	6706.990875300686	6896.5304110894485	1.045811439539629	1.0190104798969573	1.3319654873537925	0.8557212872809086	0.966342717097379	0.9000140447585503	0.8487432131996006	1.074982989968848	0.9725166823764037	1.0	12.751655020809094	-7.291203313504349	24.998860353219722	0.9435435759441981	1.1209374148281928	0.4191046281898084	0.10049053998019623	680.5418124804266	571588.2799235047	0.02843337936034917	0.042180754628091566	5.114423494677153e-08	7.291203313504349	0.17739383888399463	
SLS(ph)IESLCPEDGHR	ddPTM_K562_Methotrexat_30min_R1	2	SLSIESLCPEDGHR	14	0	Q92502;Q92502-2	Q92502	STARD8	StAR-related lipid transfer protein 8	1	S(0.395)LS(0.605)IESLCPEDGHR;S(0.374)LS(0.613)IES(0.013)LCPEDGHR	119.04	0.00086075	32996000.0	4872.6	4186.4	4883.0	5236.6	4255.4	3861.6	3953.4	4866.0	5214.4	5342.3	True	False	4658.406338286503	4878.131443366956	3858.125030143246	4777.515408346001	4815.059688349539	4607.799547636609	4840.0505863903645	4694.860021924945	4971.983682139307	4374.757702054573	1.0648375648550128	1.1150632276333787	0.8819059918064275	1.092064003019476	1.1006460280276051	1.0532696577624376	1.1063585496671666	1.0731702968875367	1.1365163560496736	1.0	12.094987399498612														
SLS(ph)MDSQVPVYSPSIDLK	ddPTM_K562_Methotrexat_30min_R1	2	SLSMDSQVPVYSPSIDLK	18	0	Q9ULJ3;Q9ULJ3-2	Q9ULJ3	ZBTB21	Zinc finger and BTB domain-containing protein 21	1	S(0.024)LS(0.975)MDSQVPVYSPSIDLK;S(0.066)LS(0.932)MDS(0.002)QVPVYSPSIDLK	144.68	6.3328e-12	26567000.0	8299.3	6010.9	10686.5	8551.6	5202.299999999999	5501.3	5541.1	7114.1	7055.700000000001	9451.2	True	False	7934.472709301223	7004.099057169514	8443.549689663274	7801.894505215533	5886.493635545614	6564.348366328276	6783.832727335371	6863.893070689736	6727.682047037112	7739.496095999504	1.0251924170363624	0.9049812765962745	1.0909689190266134	1.0080623348654807	0.760578410083869	0.8481622427229268	0.8765212415885694	0.886865628659938	0.8692661593969416	1.0	12.918023922935102	-7.727696095158917	24.930277638763457	0.8667865098798321	1.0059690822985787	0.4721383743555355	0.06904663586108037	153.80581925459435	113634.47030285143	0.019923725248093254	0.025719968634195626	1.8719916396587057e-08	7.727696095158917	0.13918257241874665	
SLS(ph)PEDAESLSVLSVPSPDTANQEPTPK	ddPTM_K562_Methotrexat_30min_R1	1	SLSPEDAESLSVLSVPSPDTANQEPTPK	28	0	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	S(0.194)LS(0.806)PEDAESLSVLSVPSPDTANQEPTPK	143.06	2.2262999999999997e-34	0.0	1025.0	702.05	1355.4	972.5	842.57	556.19	608.37	860.07	726.42	1224.0	True	False	979.9422273003462	818.0518296903718	1070.9200626369352	887.2424349036559	953.3827235072318	663.6658458669995	744.8124589574312	829.8208506076833	692.6488927546096	1002.3217391974979	0.9776723271361253	0.8161569261635885	1.0684394249438909	0.8851872609427992	0.9511743447473775	0.6621285560446479	0.7430872042681228	0.827898685777357	0.6910444677266745	1.0	9.969129963892406	-8.238421535734842	24.70627826941478	0.7714664113645522	0.936981933882268	0.34712819350570934	0.10538482927358284	710.4820139577413	762598.8372625537	0.03270542868907675	0.03268483899378868	5.775352069483044e-09	8.238421535734842	0.16551552251771584	
SLS(ph)PILPGR	ddPTM_K562_Methotrexat_30min_R1	2	SLSPILPGR	9	0	M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5	M0QZS0	ARHGEF18	Rho guanine nucleotide exchange factor 18	1	S(0.001)LS(0.999)PILPGR;SLS(1)PILPGR	110.53	0.004368199999999999	104528000.0	6632.6	5786.6	7122.799999999999	6632.7	6057.7	5697.299999999999	5889.1	6262.7	6653.799999999999	7599.200000000001	True	False	6341.038845650997	6742.73729461763	5627.8216188212755	6051.2214889310835	6854.393728936179	6798.222592383998	7209.880585903656	6042.437291267851	6344.466290315002	6222.911242246432	1.0189826913491251	1.0835342225102256	0.9043711857265164	0.9724100591135267	1.101477019695011	1.0924505151595063	1.1586025101815423	0.9709984693734067	1.0195334696794887	1.0	12.603373953788852	-5.926733159851464	13.989999852658011	1.0356752610489224	0.8422129754167776	0.003079366704656805	0.07205172088630914	3365282.5316901454	15155839.106435187	0.01923227298089955	18711459.91244466	1.183768666012738e-06	5.926733159851464	-0.19346228563214474	
SLS(ph)PLIK	ddPTM_K562_Methotrexat_30min_R1	1	SLSPLIK	7	0	Q5VY60;Q7Z4H7-3;Q7Z4H7	Q5VY60	HAUS6	HAUS augmin-like complex subunit 6	1	SLS(1)PLIK	90.709	0.017917	11504000.0	3403.1	2213.6	4702.4	3684.7	2830.1	2188.9	2365.7	3091.3	2897.4	4295.0	True	False	3253.503798756885	2579.3597752333962	3715.4305020982183	3361.668071865808	3202.307755792177	2611.873945986577	2896.268445445361	2982.5772268344804	2762.7005064111754	3517.133880599066	0.9250440583748045	0.7333698013207446	1.0563801743780583	0.9557975857584422	0.9104878757833167	0.74261430888201	0.8234740398770507	0.848013561066508	0.7854976808390958	1.0	11.780184537225582	-8.04619083087861	24.131727770719685	0.8290770847097937	0.9167381704032372	0.13001370706174809	0.09679776703237333	538.977629921001	281579.31778832764	0.0316802690834763	0.03168173635167226	8.99102425215214e-09	8.04619083087861	0.08766108569344355	
SLS(ph)PPQSQSK	ddPTM_K562_Methotrexat_30min_R1	2	SLSPPQSQSK	10	0	I3L3C6;B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-6;Q9UQB8-2;Q9UQB8;I3L0Y9	I3L3C6	BAIAP2	Brain-specific angiogenesis inhibitor 1-associated protein 2	1	S(0.017)LS(0.94)PPQS(0.042)QS(0.001)K;S(0.081)LS(0.919)PPQSQSK	81.709	0.027458999999999997	82225000.0	10798.4	8086.7	13645.7	11939.7	8268.8	8576.5	7507.6	9550.1	10232.8	13001.1	True	False	10323.715265639075	9422.88972460242	10781.654049523999	10892.965038580132	9356.292134940235	10233.787243708663	9191.370410882862	9214.217569951796	9757.079361497994	10646.47480676519	0.9696839050498648	0.8850713401035566	1.0126970894321667	1.0231522862063518	0.8788159747482686	0.9612371634229303	0.8633252393592574	0.8654712228405141	0.9164610388499638	1.0	13.378088193034316	-7.776587025763091	24.99080707342956	0.9072982781238004	0.9692558920656381	0.2194503537526794	0.05287772143874327	353.56404414804854	583312.9054684001	0.01659389022191782	0.018885696831733145	1.6726804240440214e-08	7.776587025763091	0.06195761394183774	
SLS(ph)PSHLTEDR	ddPTM_K562_Methotrexat_30min_R1	3	SLSPSHLTEDR	11	0	Q5T200-2;Q5T200	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	1	S(0.058)LS(0.932)PS(0.009)HLTEDR;SLS(0.974)PS(0.026)HLTEDR;S(0.154)LS(0.644)PS(0.202)HLTEDR	123.95	0.0014845999999999998	455513000.0	10905.0	10195.800000000001	13669.7	11584.3	10027.300000000001	10217.2	10140.4	10644.3	10485.600000000002	11964.4	True	False	10425.629257278306	11880.48265103211	10800.616777503408	10568.722404786035	11346.065707803577	12191.529298247546	12414.642830533934	10269.93393575333	9998.12674467628	9797.53122259359	1.0641077859732961	1.212599621385756	1.1023814604026627	1.0787128067950464	1.1580535392057736	1.2443470728762036	1.2671194965835022	1.0482165049977443	1.0204740885765289	1.0	13.25820255005111	-9.455362464707026	8.35543591607365	1.018029811851551	1.1607140008631611	0.5006238376125762	0.06388380404799228	0.29817393767219086	34.483824126257645	0.037868195857048176	0.018012325160296716	3.5045925652037925e-10	9.455362464707026	0.14268418901161017	
SLS(ph)PSHLTEDRQGR	ddPTM_K562_Methotrexat_30min_R1	1	SLSPSHLTEDRQGR	14	1	Q5T200-2;Q5T200	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	1	S(0.145)LS(0.832)PS(0.022)HLTEDRQGR	72.615	0.032862	8970200.0	442.14	461.66	742.59	1150.5	507.11	667.73	628.41	668.59	784.1	796.08	True	False	422.70405500348784	537.9414681217248	586.7305070927858	1049.637451266484	573.8038535881316	796.7593722662602	769.3469390887769	645.0753107395807	747.6473621443371	651.9021978270789	0.6484163673821709	0.8251873822711319	0.9000284230494644	1.6101149141161615	0.8801992929318772	1.2222069122055723	1.180156995409994	0.9895277434095887	1.1468704425854002	1.0	9.34851172893421	-7.011628532087095	23.73398884527878	1.1488255090118638	0.7682530911734115	0.4413543887808361	0.18879762658255014	251.62358324540315	513573.7787432358	0.04863437091418757	0.09097763534773391	9.735796058947408e-08	7.011628532087095	-0.3805724178384523	
SLS(ph)SINK	ddPTM_K562_Methotrexat_30min_R1	1	SLSSINK	7	0	K7ESN2;Q9C0B9-2;Q9C0B9	K7ESN2	ZCCHC2	Zinc finger CCHC domain-containing protein 2	1	S(0.002)LS(0.991)S(0.008)INK	88.029	0.016056	598040.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
SLS(ph)SPTDNLELSLR	ddPTM_K562_Methotrexat_30min_R1	1	SLSSPTDNLELSLR	14	0	J3QRU8;A0A0C4DGN6;Q9Y2X7;Q9Y2X7-3	J3QRU8	GIT1	ARF GTPase-activating protein GIT1	1	S(0.01)LS(0.629)S(0.358)PT(0.003)DNLELSLR	204.17	8.590700000000001e-13	61750000.0	2544.5	1607.9	2148.3	2565.8	1878.1	1818.4	1598.6	2301.5	2466.8	2913.5	True	False	2432.646826698272	1873.5781453730476	1697.4011882565505	2340.8602976614916	2125.1030692036647	2169.78006459043	1957.1267434116564	2220.5549404973813	2352.1190064247553	2385.8369176077713	1.0196199114637878	0.7852917907111795	0.71144895769259	0.9811484935896722	0.8907159804260474	0.9094419021590222	0.8203103611013055	0.9307236903366745	0.9858674702641351	1.0	11.220279716547077	-9.577785473117649	3.2789140324241277	0.9930695586987746	0.8703735797741846	0.23851757024684483	0.08475157366174339	0.3675870552053172	7.787691029369125	0.06811425832932767	0.022851820411898944	2.6437143408973563e-10	9.577785473117649	-0.12269597892458994	
SLS(ph)SPTVTLSAPLEGAK	ddPTM_K562_Methotrexat_30min_R1	1	SLSSPTVTLSAPLEGAK	17	0	A0A1B0GVY1;Q96PU5-9;Q96PU5-4;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-7;Q96PU5	A0A1B0GVY1	NEDD4L	E3 ubiquitin-protein ligase NEDD4-like	1	SLS(0.816)S(0.178)PT(0.006)VTLSAPLEGAK	241.87	9.510799999999998e-65	10033000.0	5291.7	3905.8	6743.9	5651.0	3512.3	3651.2	3040.6	3992.9	4955.0	6650.7	True	False	5059.083204102672	4551.167062751448	5328.447550846414	5155.585603743507	3974.2290133454167	4356.742725380873	3722.531950467586	3852.467443802733	4724.643131520462	5446.193783399348	0.9289208950888537	0.8356601405965302	0.9783800875922118	0.9466401323174269	0.7297259648489453	0.7999610184016491	0.683510741357443	0.7073687784568952	0.8675128574972379	1.0	12.411032601119343	-7.756129074896537	24.98427165077302	0.7777539273046653	0.9202031612920666	0.2886543646051909	0.09240816056896119	143.67967630428907	675989.3204480661	0.026684808724066148	0.03342205052755459	1.753359315605121e-08	7.756129074896537	0.14244923398740128	
SLS(ph)TSGESLYHVLGLDK	ddPTM_K562_Methotrexat_30min_R1	1	SLSTSGESLYHVLGLDK	17	0	Q9H3Z4-2;Q9H3Z4	Q9H3Z4-2	DNAJC5	DnaJ homolog subfamily C member 5	1	S(0.356)LS(0.604)T(0.035)S(0.004)GES(0.001)LYHVLGLDK	99.881	0.0012567	79171000.0	6281.8	4004.1	7636.1	5683.5	5187.2	3761.1	3610.1	6490.7	6251.8	7942.9	True	False	6005.65959361494	4665.709466937139	6033.38696348082	5185.236379203012	5869.4077208738845	4487.879344990692	4419.756822463665	6262.418402036218	5961.15518257106	6504.363841725338	0.9233277442274643	0.7173198763892519	0.9275906315044659	0.7971934697041154	0.9023799811476989	0.689979751163527	0.6795063944779706	0.9628025975212141	0.916485505366473	1.0	12.667192245945143	-9.299399495689668	24.62279230229003	0.954733142198687	0.8056291119761237	0.3881882943252454	0.08877882745810867	531.1100866052432	344500.9091606841	0.04865157556469214	0.02337227746715734	5.018807106955432e-10	9.299399495689668	-0.14910403022256324	
SLS(ph)VPDSGR	ddPTM_K562_Methotrexat_30min_R1	3	SLSVPDSGR	9	0	O75420	O75420	GIGYF1	PERQ amino acid-rich with GYF domain-containing protein 1	1	S(0.057)LS(0.942)VPDSGR;S(0.029)LS(0.971)VPDSGR;SLS(1)VPDSGR	112.85	0.0038504	74971000.0	7703.700000000001	5300.77	7811.0	7154.0	5948.2	5934.2	5736.610000000001	6945.200000000001	7648.700000000001	7945.0	True	False	7365.05457214993	6176.632144815654	6171.5778436307355	6526.819927301543	6730.492559627942	7080.90016459114	7023.190821670671	6700.933379423165	7293.113606470343	6506.083511375918	1.1320258277152604	0.9493625672058749	0.9485857094886198	1.0031872348225115	1.0344921868678205	1.0883506417048219	1.0794805829637122	1.029948872882826	1.120968335822665	1.0	12.667573625435637	-7.952553179662431	3.4537133772830817	1.0664714703660647	1.0000430171926376	0.16840650994558026	0.05662772020702423	0.36587014543141355	9.042002330975883	0.018381650140647566	0.02055657904653368	1.1154415563908315e-08	7.952553179662431	-0.06642845317342716	
SLS(ph)VPVDLSR	ddPTM_K562_Methotrexat_30min_R1	3	SLSVPVDLSR	10	0	Q9NYF3;D6RHW3	Q9NYF3	FAM53C	Protein FAM53C	1	S(0.001)LS(0.963)VPVDLS(0.036)R;S(0.003)LS(0.995)VPVDLS(0.002)R;S(0.122)LS(0.877)VPVDLS(0.001)R	112.64	0.0026099	81094600.0	9947.6	7513.3	11325.300000000001	10332.0	8563.599999999999	8185.699999999999	8114.4	10994.2	9981.8	10918.5	True	False	9510.315414919924	8754.74512073595	8948.274299381794	9426.20960146485	9689.863502173732	9767.470674613884	9934.26075737492	10607.527754428123	9517.7482967126	8941.053847571804	1.0636682853109891	0.97916255398837	1.0008075616066165	1.0542615850619002	1.083749596788894	1.092429465377453	1.1110838752048058	1.1863845062636433	1.0644996058599305	1.0	13.126229170999256	-7.640803491232437	1.9888657641719591	1.1028036195389048	1.011208454718925	0.30973504984661016	0.048283153147516605	0.3272577524478586	2.6454279441062014	0.015715511362501402	0.022399945212092202	2.2866332209218376e-08	7.640803491232437	-0.09159516481997976	
SLS(ph)YEEPR	ddPTM_K562_Methotrexat_30min_R1	2	SLSYEEPR	8	0	F5GZK9;Q8IZD4-2;Q8IZD4	F5GZK9	DCP1B	mRNA-decapping enzyme 1B	1	S(0.228)LS(0.771)YEEPR;SLS(1)YEEPR	114.4	0.008732799999999999	44712000.0	6137.9	5012.6	7041.299999999999	5368.4	4970.200000000001	4678.2	4305.2	5315.2	5204.4	5436.0	True	False	5868.085265313944	5840.846950368148	5563.427355057878	4897.760706978701	5623.868417313272	5582.195940478966	5270.750691690143	5128.261403315959	4962.448579956626	4451.487724083006	1.3182301354145043	1.3121112114425402	1.2497905643902296	1.100252547138637	1.263368286266986	1.2540068144586163	1.1840425085696273	1.1520331451374197	1.1147842895554378	1.0	12.120071861967146	-10.322235002297338	0.03289113788510914	5.835167402391838e-10	2.2374384606600892	0.7246119165736378	0.05127273380597056	104.70688161602659	1.699180091639356	61.288634744271796	53.56297045782776	4.761732536441325e-11	10.322235002297338	2.2374384600765724	
SLSDNGQPGT(ph)PDPADSGGTSAK	ddPTM_K562_Methotrexat_30min_R1	1	SLSDNGQPGTPDPADSGGTSAK	22	0	O75691	O75691	UTP20	Small subunit processome component 20 homolog	1	S(0.005)LS(0.02)DNGQPGT(0.976)PDPADSGGTSAK	116.83	1.8493e-05	20438000.0	3449.8	2950.1	5241.3	4090.8	2627.6	2598.9	2136.7	3062.6	3612.2	4184.4	True	False	3298.1509226738845	3437.5538818738924	4141.222756602454	3732.165915376734	2973.1754563865343	3101.1006433480366	2615.9093661001407	2954.8866221017934	3444.2696104295064	3426.564612334977	0.9625240717192877	1.0032070807885414	1.2085640357385483	1.0891859158124877	0.8676840488236152	0.9050174137048715	0.7634204114182956	0.8623466814151897	1.0051669821227929	1.0	11.742547175810254	-7.761100149257322	24.999987510796696	0.8870845405379342	1.0715867686936573	0.4489838577564744	0.08884766715954152	8.04232648589678	592655.5471574803	0.028049309703153183	0.033999683660574376	1.733404224856478e-08	7.761100149257322	0.18450222815572315	
SLSDS(ph)ESDDSK	ddPTM_K562_Methotrexat_30min_R1	1	SLSDSESDDSK	11	0	Q13185;S4R2Y4	Q13185	CBX3	Chromobox protein homolog 3	1	S(0.003)LS(0.139)DS(0.857)ES(0.001)DDSK	176.87	0.0010852	56599000.0	3446.4	2229.9	4884.6	3487.5	2394.1	1848.1	1826.1	2875.5	3190.9	3450.0	True	False	3294.9003826028415	2598.353073180769	3859.3892120085384	3181.7562896930585	2708.966113615086	2205.219169252956	2235.649409573393	2774.367035151086	3042.5557554729835	2825.1715688164772	1.1662655886003919	0.9197151429175938	1.3660725085185945	1.1262170145036403	0.9588678236451063	0.7805611501947712	0.7913322625251933	0.9820171864158062	1.0769454814907304	1.0	11.464122767752649	-7.795560123573539	4.390756383764326	0.9128677162919304	1.1461274652678695	0.38713977352063966	0.13119262553277633	0.2165765109099704	9.308080912465106	0.04282150545149458	0.05097650482700047	1.601178966353568e-08	7.795560123573539	0.23325974897593904	
SLSDS(ph)ESDDSKSK	ddPTM_K562_Methotrexat_30min_R1	2	SLSDSESDDSKSK	13	1	Q13185;S4R2Y4	Q13185	CBX3	Chromobox protein homolog 3	1	SLS(0.023)DS(0.965)ES(0.012)DDSKSK;SLS(0.181)DS(0.819)ESDDSKSK	225.33	4.1405e-34	28882000.0	15573.6	9460.7	28072.1	18376.7	9948.400000000001	9223.7	7961.5	12164.7	12451.4	20634.7	True	False	14889.003191302112	11023.919870595688	22180.14983794474	16765.643242667353	11256.788974849975	11006.049484031428	9747.069040205115	11736.860605982401	11872.537131748508	16897.5558756688	0.8811335379420847	0.6523973024092375	1.312624737041555	0.9921933897439338	0.6661785324266273	0.6513397301369073	0.5768330705294578	0.694589246654458	0.7026186046731209	1.0	14.04452696445599	-7.762157180653928	24.992897790274704	0.6898719547509289	0.9628620974308076	0.2922754177166116	0.1836981875090593	22.936834904567498	798642.6703329643	0.056560851787314285	0.0680152234647834	1.7291904141901196e-08	7.762157180653928	0.27299014267987876	
SLSFPILNPALSQPS(ph)QPSSPLPGSHGR	ddPTM_K562_Methotrexat_30min_R1	1	SLSFPILNPALSQPSQPSSPLPGSHGR	27	0	E9PN76;Q8ND24-2;Q8ND24	E9PN76	RNF214	RING finger protein 214	1	SLSFPILNPALS(0.002)QPS(0.749)QPS(0.128)S(0.089)PLPGS(0.033)HGR	103.99	2.8521999999999997e-09	12675000.0	930.09	575.96	1084.0	605.1	848.95	831.6	719.92	1152.6	1249.7	1246.9	True	False	889.204357258321	671.127600353916	856.4832137364889	552.0518224783567	960.6018053354186	992.2949305507057	881.3803860358556	1112.062404700101	1191.6017197701558	1021.0743272919615	0.870851742611746	0.6572759518240406	0.8388059427642331	0.5406578225725045	0.9407755925889109	0.9718145917765036	0.8631892531990354	1.0891101411289552	1.167007815121998	1.0	9.995872173123201	-8.49488637629758	0.9978455993109612	1.0801908047020845	0.7356038265185695	0.5618519200416132	0.11794590015937313	0.3910273851794779	0.8041888984106135	0.07540923019578058	0.0547661530082655	3.199732140490446e-09	8.49488637629758	-0.344586978183515	
SLSFPILNPALSQPSQPSS(ph)PLPGSHGR	ddPTM_K562_Methotrexat_30min_R1	1	SLSFPILNPALSQPSQPSSPLPGSHGR	27	0	E9PN76;Q8ND24-2;Q8ND24	E9PN76	RNF214	RING finger protein 214	1	SLSFPILNPALSQPS(0.001)QPS(0.362)S(0.62)PLPGS(0.017)HGR	107.17	2.264e-11	9372500.0	880.45	754.38	906.78	1001.1	726.44	834.46	623.32	924.17	871.79	1195.3	True	False	841.7464722210632	879.0284727324586	716.4592698818947	913.3351173080204	821.9795929888238	995.7075850737626	763.1153770194876	891.6664172754575	831.2606731843033	978.8195873061849	0.8599607967977414	0.8980495324492208	0.7319625385242509	0.933098529241344	0.8397661874043598	1.0172534325902236	0.7796282245634887	0.9109609460609773	0.8492480983875902	1.0	9.934899161468644														
SLSGS(ph)PLKVK	ddPTM_K562_Methotrexat_30min_R1	1	SLSGSPLKVK	10	1	Q9UIG0-2;Q9UIG0	Q9UIG0-2	BAZ1B	Tyrosine-protein kinase BAZ1B	1	SLSGS(0.999)PLKVK	114.72	0.006998999999999999	56395000.0	1780.1	1281.2	3408.4	2370.3	1337.0	1014.1	1101.9	1431.5	1750.8	2593.5	True	False	1701.8489354315554	1492.896523323559	2693.023418541929	2162.4994791281583	1512.8389348412222	1210.060472668915	1349.0291245873289	1381.153333618076	1669.4056901445053	2123.7920184711693	0.8013256103376105	0.702939134500672	1.2680259625801429	1.018225636182988	0.7123291366026758	0.5697641116195492	0.6351983211418412	0.6503241944624651	0.7860495169137334	1.0	11.052426775563193	-7.775059514413176	20.962222634271868	0.6958135294647462	0.9530364973828392	0.2658791691592607	0.1765246519295631	41.36208540432138	63657.781329901234	0.05645521587800515	0.06456431007491448	1.6785739756178544e-08	7.775059514413176	0.25722296791809307	
SLSGS(ph)SPCPK	ddPTM_K562_Methotrexat_30min_R1	1	SLSGSSPCPK	10	0	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	SLS(0.002)GS(0.603)S(0.394)PCPK	89.561	0.015279	7849900.0	3037.5	2309.2	3993.9	3397.2	2365.3	2414.5	2360.0	2825.3	2789.2	3552.1	True	False	2903.975136999805	2690.7560503112404	3155.6349698728445	3099.3727504932654	2676.3784088107277	2881.067953120101	2889.2900753481226	2725.932597604717	2659.5307007945253	2908.780269447249	0.9983480593230382	0.925046170923925	1.0848653653967837	1.0655231620785968	0.9201033288496955	0.9904728739333707	0.9932995302863389	0.9371394003998528	0.9143113107336608	1.0	11.506198603392571	-7.767430982195286	24.99996559260528	0.9593445617629808	1.0165185579077805	0.26252534846021125	0.04858582790480947	225.7418807850567	941905.2918697861	0.015884677878618133	0.018485155782357134	1.708319183494209e-08	7.767430982195286	0.05717399614479968	
SLSKS(ph)DSDLLTCSPTEDATMGSR	ddPTM_K562_Methotrexat_30min_R1	1	SLSKSDSDLLTCSPTEDATMGSR	23	1	A0A3B3ISP1;Q92625	A0A3B3ISP1	ANKS1A	Ankyrin repeat and SAM domain-containing protein 1A	1	S(0.006)LS(0.166)KS(0.403)DS(0.403)DLLT(0.016)CS(0.003)PTEDAT(0.001)MGSR	53.278	0.028977	66669000.0	3040.9	2186.2	4307.5	3802.2	2382.6	2224.6	1915.0	2888.9	2999.0	4490.3	True	False	2907.2256770708486	2547.432390953765	3403.4146154704113	3468.8670292963297	2695.953662043899	2654.472465732443	2344.4874975812077	2787.2957495558926	2859.577144587257	3677.0631581033713	0.7906379499258847	0.692789947145681	0.9255795914111772	0.9433797789553255	0.7331812226566354	0.7219001555310841	0.6375978319585063	0.7580222666051729	0.7776796376982076	1.0	11.844338241486133	-5.094407299813168	16.74934937142845	0.7876324364018528	0.8506923464963915	0.0	0.11320893761130107	0.0	0.0	0.0266200642399331	0.0	8.046234771599074e-06	5.094407299813168	0.06305991009453871	
SLSLES(ph)TDR	ddPTM_K562_Methotrexat_30min_R1	1	SLSLESTDR	9	0	H0Y7V8;A0A0A0MRJ1;H0Y5V1;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-2;Q5VT25-6	H0Y7V8	CDC42BPA	Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha	1	SLS(0.275)LES(0.689)T(0.035)DR	107.21	0.005632	10931000.0	1061.8	876.09	1608.6	1249.4	1066.6	1250.9	969.04	1223.5	1300.5	1427.0	True	False	1015.1245433634211	1020.8489815161846	1270.976842819665	1139.8670418186396	1206.8765952891897	1492.6187212913387	1186.371887548875	1180.4688115135975	1240.0400388581945	1168.556472087279	0.8686996029812771	0.8735983291357252	1.0876469158135271	0.9754488285727482	1.0327927011806826	1.2773184325659666	1.015245660682341	1.0101940639676923	1.0611725393495373	1.0	10.190511740675518	-6.7558743762954565	24.720742144838365	1.0603734737012518	0.8711488460042996	0.46437865326305094	0.07999621513354911	102.1562621422492	453780.63334386883	0.021319880304512682	0.05314787933663654	1.7543879014158309e-07	6.7558743762954565	-0.18922462769695214	
SLSLQPQLT(ph)QR	ddPTM_K562_Methotrexat_30min_R1	1	SLSLQPQLTQR	11	0	P21731	P21731	TBXA2R	Thromboxane A2 receptor	1	S(0.089)LS(0.036)LQPQLT(0.875)QR	105.1	0.0092044	8998900.0	479.23	428.98	595.14	533.9	441.79	477.97	439.54	413.12	401.31	391.45	True	False	458.1636230137998	499.8616535867468	470.22824706931203	487.0938159332252	499.89312866380214	570.330937897211	538.1180337790311	398.5903354413548	382.6531856933352	320.5546117719451	1.4292841412612558	1.5593650355664441	1.4669208609104354	1.519534575530495	1.5594632250040608	1.779200538543387	1.678709380608971	1.2434397160535233	1.1937222914314816	1.0	8.32442635448379	-9.435956840716235	3.5659765856890995	1.118996792337054	1.57078867334516	0.7774881281903505	0.1055332656636785	0.12489938282344512	2.94787705084747	0.07594443684027397	0.03118126521957562	3.6647399226258865e-10	9.435956840716235	0.45179188100810586	
SLSNS(ph)NPDISGTPTSPDDEVR	ddPTM_K562_Methotrexat_30min_R1	2	SLSNSNPDISGTPTSPDDEVR	21	0	Q96N67-4;Q96N67-3;Q96N67-2;Q96N67-6;Q96N67-5;Q96N67;A0A0U1RRC1;A0A0U1RQJ5	Q96N67-4	DOCK7	Dedicator of cytokinesis protein 7	1	SLS(0.001)NS(0.999)NPDISGTPTSPDDEVR;SLS(0.001)NS(0.999)NPDISGTPTSPDDEVR	391.06	0.0	163068000.0	3022.3999999999996	2340.3	3851.3	3536.3	3114.3	2841.4	2411.37	2752.2	3110.0	3422.4	True	False	2889.5389149195753	2726.9947967016274	3042.9647611285427	3226.2780694599446	3523.8850372296315	3390.4603362996313	2952.1811055051676	2655.403566038191	2965.4167788150617	2802.570196265945	1.03103177175348	0.9730335391188375	1.0857764651828852	1.151185463171818	1.2573761905856071	1.209768212342004	1.0533834654484513	0.9474886907654145	1.0581061565437642	1.0	11.452534793477437	-8.995835035093677	24.957518763868944	1.001765659905059	1.1189599371784513	0.2989499764500645	0.08043262012750879	165.8839518729503	994013.5435718228	0.03922699381262208	0.026323948643850608	1.0096363192982826e-09	8.995835035093677	0.11719427727339227	
SLSPS(ph)HLTEDRQGR	ddPTM_K562_Methotrexat_30min_R1	1	SLSPSHLTEDRQGR	14	1	Q5T200-2;Q5T200	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	1	S(0.019)LS(0.367)PS(0.612)HLT(0.002)EDRQGR	82.94200000000001	0.021676	33658000.0	1036.5	880.67	1248.2	1686.8	864.28	1126.2	1160.0	1017.9	1029.0	1346.2	True	False	990.936701070057	1026.1857486694955	986.2198776622558	1538.92086292595	977.9479690385728	1343.8222111426217	1420.159528560941	982.0998800487874	981.1620145982955	1102.3901350552876	0.8988983750479217	0.9308734866518283	0.894619650794312	1.395985698700732	0.887116038088935	1.2190078343500648	1.288254932079664	0.8908823190798353	0.8900315626909051	1.0	10.106419167647758														
SLSPS(ph)PLGSSAASTALERPSFLSQTGHGVSR	ddPTM_K562_Methotrexat_30min_R1	2	SLSPSPLGSSAASTALERPSFLSQTGHGVSR	31	1	A0A0C3SFZ9;M0QZI3;O14526-3;O14526-2;O14526	A0A0C3SFZ9	FCHO1	F-BAR domain only protein 1	1	S(0.191)LS(0.191)PS(0.591)PLGS(0.021)S(0.006)AASTALERPSFLSQTGHGVSR;S(0.026)LS(0.204)PS(0.703)PLGS(0.008)S(0.008)AAS(0.005)T(0.005)ALERPS(0.004)FLS(0.011)QT(0.011)GHGVS(0.014)R	48.118	0.008445000000000001	58117000.0	622.11	687.3	795.73	750.61	675.56	636.56	750.74	785.4100000000001	830.21	753.25	True	False	594.7627892934809	800.864642897504	628.7171472938533	684.8051866972061	764.40798116779	759.5662109083177	919.1125555791735	757.7866851253746	791.6137183086979	616.829125858264	0.9642261760352517	1.2983573721217698	1.0192727952316585	1.1102024174756004	1.2392540318263716	1.2314045804037665	1.490060240427701	1.228519622952273	1.2833598238527346	1.0	9.268727078794218	-7.834064320368045	3.372058161299403	1.2729383024042864	1.1052986323388738	0.20326235786819014	0.13787211474241176	0.3494558092818559	7.9576949073500645	0.04270570200126304	0.05065586244383182	1.4653308048194866e-08	7.834064320368045	-0.16763967006541258	
SLSS(ph)PTDNLELSLR	ddPTM_K562_Methotrexat_30min_R1	3	SLSSPTDNLELSLR	14	0	J3QRU8;A0A0C4DGN6;Q9Y2X7;Q9Y2X7-3	J3QRU8	GIT1	ARF GTPase-activating protein GIT1	1	S(0.001)LS(0.097)S(0.894)PT(0.007)DNLELSLR;SLS(0.002)S(0.995)PT(0.003)DNLELSLR;S(0.002)LS(0.025)S(0.957)PT(0.016)DNLELSLR	233.28	1.547e-47	111682000.0	8400.1	7302.9	9118.6	9491.400000000001	7747.700000000001	6864.5	7284.0	9639.9	9485.7	10920.7	True	False	8030.841661995739	8509.580096924463	7204.730473042023	8659.303698349162	8766.658351136371	8190.9674732627645	8917.62241899818	9300.859253052662	9044.71187742959	8942.855406253368	0.8980176126274059	0.9515506748520239	0.8056409441668992	0.9682929338535509	0.9802974500746385	0.9159230582589047	0.9971784194075706	1.040032386808911	1.0113897034614916	1.0	13.126519834494319	-8.291826100167142	0.7616297827892892	1.0215560824304137	0.8955021097199544	0.4999769480279078	0.0458766713173133	0.5697075183427124	0.7183320492040559	0.03311112914123256	0.031320795038127125	5.107094568916095e-09	8.291826100167142	-0.12605397271045937	
SLSS(ph)PTVTLSAPLEGAK	ddPTM_K562_Methotrexat_30min_R1	1	SLSSPTVTLSAPLEGAK	17	0	A0A1B0GVY1;Q96PU5-9;Q96PU5-4;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-7;Q96PU5	A0A1B0GVY1	NEDD4L	E3 ubiquitin-protein ligase NEDD4-like	1	SLS(0.244)S(0.739)PT(0.016)VTLSAPLEGAK	242.93	7.710899999999999e-65	18113000.0	2828.8	2407.6	4254.6	3249.2	2237.9	2073.1	1834.0	2592.0	2644.2	3663.5	True	False	2704.4493391094825	2805.414977797222	3361.617602549138	2964.347680708442	2532.223075752559	2473.6972348781474	2245.321185673073	2500.8378908404134	2521.2717191455886	3000.00464995918	0.9014817157521009	0.935136876482973	1.1205374640318904	0.9881143620056646	0.8440730502824434	0.8245644668956784	0.748439235153727	0.8336113381939063	0.8404226037382624	1.0	11.550749021539193	-7.768832686151662	5.884327662670866	0.8332515859908254	0.9929950778187487	0.411350612211123	0.0794565292511136	0.14263754544578847	17.33330264375827	0.0245956029528186	0.029581865126375992	1.7028143987381054e-08	7.768832686151662	0.15974349182792336	
SLSSLDTALAELRENHGQADHS(ph)PSMTATHFPR	ddPTM_K562_Methotrexat_30min_R1	2	SLSSLDTALAELRENHGQADHSPSMTATHFPR	32	1	Q9Y3L3;Q6ZT62-2;Q6ZT62;Q9Y3L3-2	Q9Y3L3	SH3BP1	SH3 domain-binding protein 1	1	SLSSLDT(0.008)ALAELRENHGQADHS(0.449)PS(0.171)MT(0.209)AT(0.162)HFPR;SLSSLDT(0.003)ALAELRENHGQADHS(0.872)PS(0.073)MT(0.037)AT(0.015)HFPR	54.596000000000004	0.0010241	47968000.0	6728.6	5784.9	5713.1	7534.7	5816.9	5151.5	6088.2	7426.4	7820.6	9115.599999999999	True	False	6432.818800598151	6740.756398512688	4513.9983841309395	6874.144549376428	6581.9243082108505	6146.954466969646	7453.63382912476	7165.209302676406	7457.022012990696	7464.676508029996	0.8617679270733511	0.9030205650923301	0.6047145350873657	0.9208898124361701	0.8817427387684463	0.8234723179708011	0.9985206754916497	0.9598820920060711	0.9989745710974794	1.0	12.865864025213023	-8.666730914382843	1.0567139126372904	1.0009575560354214	0.8166687510921635	0.4248215621577166	0.08585657101565526	0.5244381747354477	1.1805289330012259	0.05905330983022785	0.03650150466586777	2.154115995513988e-09	8.666730914382843	-0.18428880494325783	
SLSTS(ph)GESLYHVLGLDK	ddPTM_K562_Methotrexat_30min_R1	1	SLSTSGESLYHVLGLDK	17	0	Q9H3Z4-2;Q9H3Z4	Q9H3Z4-2	DNAJC5	DnaJ homolog subfamily C member 5	1	S(0.013)LS(0.011)T(0.039)S(0.93)GES(0.007)LYHVLGLDK	105.39	0.011071	0.0	1421.5	1020.3	1568.2	1384.0	1044.4	841.05	989.63	1220.6	1093.1	1571.4	True	False	1359.01256205604	1188.8872328653035	1239.056250720998	1262.6668687986223	1181.7569061691634	1003.5710093069636	1211.5797191808308	1177.6708061573343	1042.2820195893066	1286.80423282267	1.05611446356139	0.9239068403259907	0.9628941365875565	0.9812423961560174	0.918365728077316	0.7798940846701911	0.9415416022708983	0.9151903421813076	0.8099771457100421	1.0	10.329576871384145	-7.904216525074979	4.68909398169857	0.8836341240788496	0.9750686461908914	0.29620817189193205	0.06603722089670115	0.26716917444148136	10.146239659503106	0.020189231048873747	0.023045160135069742	1.2467617644800509e-08	7.904216525074979	0.09143452211204184	
SLSYS(ph)PVER	ddPTM_K562_Methotrexat_30min_R1	4	SLSYSPVER	9	0	Q9UQ35;Q9UQ35-2;I3L4U6	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	S(0.103)LS(0.034)YS(0.864)PVER;S(0.256)LS(0.03)YS(0.714)PVER;SLS(0.043)YS(0.957)PVER;S(0.04)LS(0.146)YS(0.813)PVER	158.47	1.2154e-10	745770000.0	11496.4	9680.2	13300.900000000001	11940.099999999999	10531.7	10813.2	9766.5	11124.599999999999	12604.9	13191.400000000001	True	False	10991.032021400672	11279.688514733614	10509.222857553206	10893.329971201167	11916.803148891027	12902.697863192494	11956.886237664161	10733.34151251669	12018.900950252726	10802.309632720491	1.0174705590838218	1.0441922975959816	0.9728681379138109	1.0084260071758147	1.1031717803010113	1.1944388100216892	1.106882383878946	0.9936154283159137	1.112623259182198	1.0	13.399052186329902	-7.75718044893822	24.859507759621042	1.091356584057391	1.0104236571777807	0.2898407730336179	0.056535488728106376	129.74630359247087	757325.7538901964	0.017749846697646482	0.022089685208028554	1.7491197800391658e-08	7.75718044893822	-0.0809329268796104	
SLTDPSQESHTEAIS(ph)DAETS(ph)SSDISFSGIATR	ddPTM_K562_Methotrexat_30min_R1	1	SLTDPSQESHTEAISDAETSSSDISFSGIATR	32	0	Q5QJE6;J3KP30	Q5QJE6	DNTTIP2	Deoxynucleotidyltransferase terminal-interacting protein 2	2	SLTDPS(0.002)QES(0.004)HT(0.071)EAIS(0.433)DAET(0.297)S(0.366)S(0.357)S(0.405)DIS(0.061)FS(0.002)GIATR	53.493	0.0096029	11994000.0	748.84	781.01	1140.0	848.38	746.88	538.89	706.43	848.24	590.62	923.51	True	False	715.9218902356984	910.0586275998535	900.7295790217697	774.0038425949241	845.1078112596947	643.0228657100405	864.8649101390562	818.4069184129908	563.1622051137465	756.2533900051319	0.9466693302767742	1.2033779148992347	1.1910420381925924	1.0234715676311503	1.1174929229129933	0.8502743580503843	1.143617895231104	1.082186115433396	0.7446739579044067	1.0	9.56272589413379	-8.19950451077482	24.999040201990834	0.9805031735641124	1.1035585990817254	0.20977409361741195	0.12599228025195533	403.3535350271316	162806.9843826377	0.04137500061954056	0.04137499609264666	6.31677618369954e-09	8.19950451077482	0.12305542551761295	
SLTDPSQESHTEAIS(ph)DAETSSSDISFSGIATR	ddPTM_K562_Methotrexat_30min_R1	2	SLTDPSQESHTEAISDAETSSSDISFSGIATR	32	0	Q5QJE6;J3KP30	Q5QJE6	DNTTIP2	Deoxynucleotidyltransferase terminal-interacting protein 2	1	SLTDPSQESHTEAIS(0.983)DAET(0.009)S(0.003)S(0.004)S(0.001)DISFSGIATR;SLTDPSQESHT(0.006)EAIS(0.983)DAET(0.007)S(0.002)S(0.001)S(0.001)DISFSGIATR	135.92	5.9824e-26	92459000.0	2799.12	2697.4	3394.7	3247.1	2067.18	2650.3	2603.0	2611.15	2952.77	3180.79	True	False	2676.0740363716513	3143.0995020394685	2682.1988613203507	2962.4317844479788	2339.0504033845014	3162.4329658953043	3186.789011072526	2519.31437448609	2815.496367196702	2604.7181085147135	1.027394875331683	1.2066946867550883	1.0297463101870241	1.1373329707978435	0.8980051990033948	1.2141171651386937	1.2234679064329639	0.9672119091315707	1.080921715863595	1.0	11.346911532231731	-9.300080647985821	24.995691780730176	1.0180501256926255	1.1036990846453876	0.14453364767754595	0.09936828851097473	1199.4838856266235	775897.8314039966	0.05400276043441637	0.0259427464813201	5.010941723753386e-10	9.300080647985821	0.08564895895276203	
SLTEISTDFDRSS(ph)PPLQPPPVNSLTTENR	ddPTM_K562_Methotrexat_30min_R1	1	SLTEISTDFDRSSPPLQPPPVNSLTTENR	29	1	J3KRR7;Q9NQC7-2;Q9NQC7	J3KRR7	CYLD	Ubiquitin carboxyl-terminal hydrolase CYLD	1	SLTEIS(0.042)T(0.158)DFDRS(0.214)S(0.579)PPLQPPPVNS(0.002)LT(0.002)T(0.002)ENR	63.372	0.00056218	22183000.0	735.15	579.88	1156.7	853.66	610.81	853.54	670.2	1150.2	1116.6	1028.4	True	False	702.8336862437554	675.6953137253081	913.9244772407721	778.8209531926525	691.1422212343803	1018.4745250387797	820.5094103806404	1109.7468140604335	1064.6895097186166	842.1467946002514	0.8345738424111383	0.8023486143482216	1.085231794623872	0.9248042718755959	0.8206909123990079	1.2093788536263765	0.9743068733879325	1.3177593516664823	1.2642564414485498	1.0	9.71792792114605	-8.265808799844207	24.965622797082382	1.161823181559588	0.9008518305473676	0.5223090398325041	0.1238993339808618	317.1276649365254	1811970.9621802873	0.043911098882404305	0.040066819551592935	5.422395613364154e-09	8.265808799844207	-0.26097135101222046	
SLTNDWEDHLAVK	ddPTM_K562_Methotrexat_30min_R1	2	SLTNDWEDHLAVK	13	0	P08238;P07900;P07900-2	P08238;P07900	HSP90AB1;HSP90AA1	Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha	0	;	155.08	1.6748000000000002e-08	49824000.0	11554.2	8290.3	13307.599999999999	10879.4	9202.6	7047.200000000001	6650.6	10999.5	11377.0	13579.6	False	True	11046.29120260844	9660.131163994147	10514.51661911412	9925.619893358185	10412.903202520445	8408.971662550419	8142.166345385685	10612.641350424048	10848.085753240823	11120.202850985574	0.9933533902782553	0.8687009844553311	0.9455328072708878	0.8925754346719031	0.9363950767856325	0.7561886932489851	0.7321958470086769	0.9543568127881281	0.9755294843636209	1.0	13.440895485006704	-9.50279691133052	24.67504845884464	0.9801576098460701	0.8735990107327881	0.27764775380036955	0.07618280718158398	889.7875523706782	1093312.5694039154	0.04580340938423871	0.021531037956534035	3.141977630068673e-10	9.50279691133052	-0.10655859911328203	
SLTVSDDAES(ph)SEPER	ddPTM_K562_Methotrexat_30min_R1	1	SLTVSDDAESSEPER	15	0	Q8NFC6;H0Y9Y2	Q8NFC6	BOD1L1	Biorientation of chromosomes in cell division protein 1-like 1	1	SLTVSDDAES(0.642)S(0.358)EPER	198.48	7.529099999999999e-102	0.0	1582.2	1269.6	2086.1	1448.4	1152.6	1347.9	1044.3	1073.3	1484.2	1769.4	True	False	1512.6483824727882	1479.3798204898444	1648.2561182432569	1321.4210207860715	1304.187102691094	1608.3625984719768	1278.510858341543	1035.5514306477692	1415.1998659541196	1448.9445141634428	1.0439657058545995	1.021005156532149	1.137556408911136	0.9119886978895132	0.9000945791523801	1.110023594934258	0.8823739251876731	0.7146936411472259	0.9767108761726422	1.0	10.500786634095286	-7.811009750446955	0.752920124255853	0.8916226200118671	1.0644308706881285	0.20329994527905182	0.10478254733061038	1.080521060567293	1.337756702794751	0.0646233128282277	0.10645123006637923	1.545219747059145e-08	7.811009750446955	0.17280825067626138	
SLTWPPSGSPS(ph)HAGTTPPENGLSEHPCETEQINAK	ddPTM_K562_Methotrexat_30min_R1	1	SLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAK	35	0	P23497-2;P23497-3;P23497;P23497-4;E9PHV6;P23497-7;P23497-6;P23497-5	P23497-2	SP100	Nuclear autoantigen Sp-100	1	S(0.013)LT(0.012)WPPS(0.277)GS(0.277)PS(0.308)HAGT(0.055)T(0.052)PPENGLS(0.004)EHPCET(0.001)EQINAK	40.037	0.023461000000000003	14914000.0	1390.1	1340.4	1780.0	1401.3	1068.0	1113.9	1166.4	1180.0	1569.6	1872.5	True	False	1328.9928684587414	1561.8783170956121	1406.402325139254	1278.4502046586038	1208.4607198282913	1329.1454102217779	1427.9948914771394	1138.4987311696336	1496.6296385942499	1533.3721051040163	0.8667125637899805	1.0185905377414324	0.9171957155460647	0.8337507904331415	0.7881066283948835	0.866812045033006	0.9312774679569845	0.7424803981890642	0.9760381277398587	1.0	10.582492124545869	-7.008868937138658	24.136155793726246	0.8651930467011155	0.948961944470274	0.08393649067032782	0.08272348253738263	468.68135753284025	1275500.7194451191	0.020718903140073255	0.039870268128064025	9.797856238248603e-08	7.008868937138658	0.08376889776915852	
SLVESVSSS(ph)PNKESNEEEQVWHFLGK	ddPTM_K562_Methotrexat_30min_R1	1	SLVESVSSSPNKESNEEEQVWHFLGK	26	1	Q9H2U2-4;Q9H2U2-6;Q9H2U2-3;Q9H2U2;Q9H2U2-2	Q9H2U2-4	PPA2	Inorganic pyrophosphatase 2, mitochondrial	1	S(0.003)LVES(0.015)VS(0.027)S(0.111)S(0.483)PNKES(0.36)NEEEQVWHFLGK	67.11	0.0010622	5141200.0	855.26	644.61	1407.3	1165.9	642.54	625.67	724.98	825.76	740.73	1141.9	True	False	817.6637944594082	751.1208460034339	1111.9269618924002	1063.6873571765263	727.0452723955715	746.5718725320579	887.5752198414749	796.7175527547761	706.2936239780319	935.0908447627636	0.8744217730704581	0.8032597583542767	1.1891111629635307	1.1375230151530231	0.7775129833294709	0.7983950187443727	0.9491860869054455	0.8520215519347819	0.7553208631373366	1.0	9.868962720467163	-7.777454064938632	24.978472847295983	0.8498456132922594	1.00037990361231	0.24263863242652806	0.1258504300765126	366.8153115184826	572127.8662751587	0.04175113488689946	0.047490253676821415	1.6693443634047034e-08	7.777454064938632	0.1505342903200506	
SLVGS(ph)WLK	ddPTM_K562_Methotrexat_30min_R1	2	SLVGSWLK	8	0	B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2	B0QY16	KIAA0930	Uncharacterized protein KIAA0930	1	S(0.148)LVGS(0.852)WLK;S(0.014)LVGS(0.986)WLK	95.775	0.016849	5380600.0	3772.9	2842.4	4327.6	4238.6	2775.5	3043.0	2510.8999999999996	3250.6000000000004	3846.2000000000003	5491.0	True	False	3607.047833542902	3312.058287460881	3419.2959001531676	3867.0085188510384	3140.5268987672493	3631.0166830998014	3074.0332416066103	3136.274555542383	3667.3910015043352	4496.526691122108	0.8021853491194919	0.7365814805459004	0.7604304689004042	0.8599990135688546	0.6984339501348609	0.8075158744790374	0.6836461679802651	0.6974882550424105	0.8156053001409268	1.0	12.134595317144019	-10.042712830956656	11.516165886176912	0.9999999802570569	0.7561956286411424	0.6586460947175542	0.052889539999837566	2.5202891193996626	679.9355442231009	0.050768581087359904	0.01311152355996391	9.063316975639307e-11	10.042712830956656	-0.24380435161591452	
SLVGT(ph)PYWMAPELISR	ddPTM_K562_Methotrexat_30min_R1	1	SLVGTPYWMAPELISR	16	0	O96013-3;O96013-4;O96013;M0R1R1;O96013-2	O96013-3	PAK4	Serine/threonine-protein kinase PAK 4	1	S(0.043)LVGT(0.949)PY(0.008)WMAPELISR	174.47	5.7043e-06	27368000.0	1237.1	878.88	1347.2	1054.1	886.13	887.17	836.63	1381.6	1362.9	1408.9	True	False	1182.7185652617154	1024.0999815942932	1064.4411305773046	961.6886895958282	1002.6716270238237	1058.6030465808917	1024.2655744654658	1333.0083449016659	1299.5390764781505	1153.7345574798658	1.025121903122292	0.8876391670465892	0.922604877938642	0.8335441487481067	0.8690661300932053	0.9175447157387984	0.8877826947498195	1.1553856441757215	1.1263761391673746	1.0	10.17209562246049	-9.255348079993553	24.926652296389214	1.1056606723712075	0.9023196075520203	0.6708964617578876	0.06004355297202095	245.57503061076642	1004940.108769662	0.02864118172749975	0.01598569223631961	5.554588875136113e-10	9.255348079993553	-0.20334106481918712	
SLVHEVGKPPQDVTDDS(ph)PPSK	ddPTM_K562_Methotrexat_30min_R1	2	SLVHEVGKPPQDVTDDSPPSK	21	1	Q96T58	Q96T58	SPEN	Msx2-interacting protein	1	SLVHEVGKPPQDVT(0.154)DDS(0.66)PPS(0.186)K;SLVHEVGKPPQDVT(0.002)DDS(0.931)PPS(0.067)K	66.587	0.010194	19320400.0	12750.6	9103.1	14782.6	12687.0	9200.8	8945.8	8943.2	11262.7	10997.2	13542.6	True	False	12190.09889113736	10607.232548756388	11679.934276181764	11574.75040783823	10410.866470970164	10674.449242088143	10948.940255022597	10866.584457240873	10485.942572342447	11089.903909522905	1.0992068994096258	0.9564765064959628	1.0532042812519051	1.0437196302394456	0.9387697635531673	0.9625375773474456	0.9872890102880636	0.9798628144928949	0.9455395337860559	1.0	13.436959244611257	-7.750658646776049	24.999447553161122	0.9685842741060505	1.0333930652830035	0.4544535309686689	0.03696930221599415	205.99737929743762	477685.2904958885	0.010522016910348018	0.013444499467088927	1.7755845328560534e-08	7.750658646776049	0.06480879117695293	
SLYAS(ph)SPGGVYATR	ddPTM_K562_Methotrexat_30min_R1	5	SLYASSPGGVYATR	14	0	P08670;B0YJC4;A0A1B0GVG8;A0A1B0GTT5	P08670	VIM	Vimentin	1	SLYAS(0.5)S(0.5)PGGVYATR;SLYAS(0.992)S(0.008)PGGVYATR;SLYAS(0.5)S(0.5)PGGVYATR;SLYAS(0.5)S(0.5)PGGVYATR;SLYAS(0.5)S(0.5)PGGVYATR	266.77	4.464999999999999e-106	3763254600.0	17881.4	16253.2	18649.8	19258.8	15772.900000000001	13783.5	15876.0	18155.4	17124.1	20299.199999999997	True	False	17095.355066583812	18938.76504283676	14735.461844596653	17570.410905215962	17847.31281627308	16446.966300199183	19436.597133994404	17516.864291421316	16328.004328651767	16622.81817673028	1.028427002258559	1.1393233591009553	0.886459906372815	1.0570055401202778	1.0736634803150844	0.9894210551627601	1.1692720769335634	1.0537842684186114	0.9822645086444358	1.0	14.020877372062351														
SLYASS(ph)PGGVYATR	ddPTM_K562_Methotrexat_30min_R1	3	SLYASSPGGVYATR	14	0	P08670;B0YJC4;A0A1B0GVG8;A0A1B0GTT5	P08670	VIM	Vimentin	1	SLYAS(0.232)S(0.768)PGGVYATR;SLY(0.001)AS(0.158)S(0.841)PGGVYATR;SLYAS(0.031)S(0.969)PGGVYATR	176.43	9.2595e-06	176169400.0	5264.1	4183.0	5456.9	5347.2	4356.700000000001	4457.0	4114.5	4838.599999999999	5032.6	6364.500000000001	True	False	5032.696467055363	4874.1696511570735	4311.571262950784	4878.419278063578	4929.682413928759	5318.252171073223	5037.281362296548	4668.423695455414	4798.6355244580955	5211.827376734054	0.9656299227256944	0.9352131793381516	0.8272667053782186	0.9360285607004498	0.945864484294931	1.020419861719568	0.96650963245316	0.8957364390646494	0.9207203496185474	1.0	12.347573585211649	-7.515103858894957	23.623761562436805	0.9551050784962366	0.906903166655531	0.1781807301822651	0.04668642941258736	325.4516958148368	988877.4800071247	0.01446911559305999	0.019582944007880545	3.054190634682261e-08	7.515103858894957	-0.04820191184070566	
SLYASSPGGVYATRS(ph)SAVR	ddPTM_K562_Methotrexat_30min_R1	1	SLYASSPGGVYATRSSAVR	19	1	P08670;B0YJC4;A0A1B0GVG8;A0A1B0GTT5	P08670	VIM	Vimentin	1	SLYASSPGGVY(0.012)AT(0.157)RS(0.674)S(0.157)AVR	103.84	0.00036653	9793700.0	1417.2	894.13	1089.4	1391.3	1131.5	983.35	1090.4	1208.7	1205.2	1582.9	True	False	1354.901584907366	1041.8697848886145	860.7498275318553	1269.326889132602	1280.3120828517895	1173.3684703668064	1334.9499568472843	1166.1893359023177	1149.170515057206	1296.221471385392	1.0452701292312778	0.80377451530337	0.6640453398846203	0.9792515531901772	0.9877263346698009	0.9052222141581397	1.0298779848327149	0.8996837050198706	0.8865541425023464	1.0	10.340096521689988														
SLYASSPGGVYATRSS(ph)AVR	ddPTM_K562_Methotrexat_30min_R1	2	SLYASSPGGVYATRSSAVR	19	1	P08670;B0YJC4;A0A1B0GVG8;A0A1B0GTT5	P08670	VIM	Vimentin	1	SLYASSPGGVY(0.003)AT(0.022)RS(0.153)S(0.822)AVR;SLYASSPGGVY(0.005)AT(0.03)RS(0.207)S(0.758)AVR	109.04	0.00032983	38380000.0	1912.22	1464.8	2328.22	2549.8	1644.99	1728.23	1869.65	1828.9299999999998	1836.1599999999999	2774.5499999999997	True	False	1828.1610984275776	1706.8333026571568	1839.5584390088286	2326.262992819888	1861.3350182681095	2062.185988246325	2288.9666056672086	1764.6054952526067	1750.7973223759052	2272.052109060801	0.8046299163372997	0.7512298225249381	0.8096462364013507	1.0238598769556815	0.8192307785746737	0.907631466735493	1.0074445900861841	0.7766571410116304	0.7705797395199854	1.0	11.149780207806401	-7.017981350541885	24.29027143108262	0.8946415774473324	0.7785568713876283	0.2584449749630461	0.08781574445689072	702.5832880238532	949094.9262626497	0.024016428962773197	0.04274447226758798	9.59441830948137e-08	7.017981350541885	-0.11608470605970411	
SMDSYLNQS(ph)YGMDNHSGGGGGSR	ddPTM_K562_Methotrexat_30min_R1	1	SMDSYLNQSYGMDNHSGGGGGSR	23	0	Q5BKZ1-2;Q5BKZ1	Q5BKZ1-2	ZNF326	DBIRD complex subunit ZNF326	1	S(0.001)MDS(0.001)Y(0.005)LNQS(0.571)Y(0.393)GMDNHS(0.026)GGGGGS(0.003)R	44.863	0.031034	9825700.0	1153.4	954.02	1120.5	1064.1	929.96	1104.7	970.05	1177.5	1268.5	1400.9	True	False	1102.6979170421648	1111.655589432674	885.3223625385024	970.8120051218303	1052.2660402729566	1318.1676404273262	1187.6084057590865	1136.0866575866467	1209.5277118736024	1147.183435001451	0.9612219662505588	0.9690303708327762	0.7717356575475505	0.8462569938700365	0.9172604904913273	1.1490469616357901	1.0352384540468755	0.9903269371957151	1.054345517002756	1.0	10.16388038186388	-8.082100949415747	7.258785321081242	1.0441426298691971	0.8842738849598988	0.576687207244563	0.0657802991743146	0.21059326460190647	16.260451078164003	0.023109051996533094	0.02318699889022206	8.27749735376169e-09	8.082100949415747	-0.15986874490929837	
SMGS(ph)QEDDSGNKPSSYS	ddPTM_K562_Methotrexat_30min_R1	1	SMGSQEDDSGNKPSSYS	17	1	H7C3P9;Q9UNS2-2;Q9UNS2	H7C3P9	COPS3	COP9 signalosome complex subunit 3	1	S(0.029)MGS(0.971)QEDDSGNKPSSYS	83.751	0.010523000000000001	0.0	1978.0	1389.4	2873.1	1965.3	1428.1	1379.6	1287.8	1974.0	1691.4	2686.9	True	False	1891.0494883903248	1618.9747342380217	2270.075573234601	1793.0052003250948	1615.9201816355642	1646.1881748289466	1576.6219317937753	1904.5733011261486	1612.767183179355	2200.2763734066657	0.8594599802307707	0.7358051714800625	1.0317229238433652	0.8148999925627538	0.7344169128779269	0.7481733634580505	0.716556315765327	0.8656063956989717	0.7329839117811932	1.0	11.10346903454871	-5.907941780860103	19.089558205539724	0.8131510427139688	3.509889098915305	0.008227891312203917	0.10844430823770446	1731.4797327085287	366682.48036382935	0.025774992138522478	4289.173953577991	1.2361131288948265e-06	5.907941780860103	2.6967380562013363	
SMGSQEDDSGNKPSS(ph)YS	ddPTM_K562_Methotrexat_30min_R1	2	SMGSQEDDSGNKPSSYS	17	1	H7C3P9;Q9UNS2-2;Q9UNS2	H7C3P9	COPS3	COP9 signalosome complex subunit 3	1	SMGSQEDDSGNKPS(0.114)S(0.491)Y(0.006)S(0.389);SMGSQEDDSGNKPS(0.327)S(0.412)YS(0.261)	79.514	0.023576	65018000.0	10510.2	7054.6	12907.0	11595.099999999999	7274.7	7274.7	6820.9	9623.9	9885.5	13199.5	True	False	10048.184192558141	8220.252742302826	10197.997084591208	10578.575585554117	8231.450560425908	8680.43281779367	8350.660455483901	9285.421982121552	9425.925262693336	10808.942644229886	0.9296176807749221	0.7605047980054761	0.9434777683860857	0.9786873641337392	0.7615407752043245	0.8030788120082704	0.7725695963371325	0.8590499818294778	0.8720487815452658	1.0	13.399937781758489	-10.280298018409182	2.416599595460539	0.9999456054494801	0.8484212715733005	0.26092912840069493	0.07468756979015151	2.2200457613741547	17.058055155796136	0.07473643678091464	0.0202765485803419	5.244474542156245e-11	10.280298018409182	-0.15152433387617958	
SMGSQEDDSGNKPSSYS(ph)	ddPTM_K562_Methotrexat_30min_R1	1	SMGSQEDDSGNKPSSYS	17	1	H7C3P9;Q9UNS2-2;Q9UNS2	H7C3P9	COPS3	COP9 signalosome complex subunit 3	1	SMGSQEDDSGNKPS(0.064)S(0.213)Y(0.001)S(0.722)	77.505	0.028508	53313000.0	8274.9	6235.0	10832.0	9028.3	6328.3	5350.1	5523.3	8020.3	8353.2	10981.0	True	False	7911.145304085495	7265.227773120814	8558.511228038424	8236.80295634003	7160.582371993793	6383.93110622815	6762.040624224693	7738.221503050682	7964.86155524051	8992.234491934421	0.87977524509413	0.8079446526486109	0.9517669090719303	0.9159906765918999	0.7963073447891591	0.709938237481931	0.7519866869897466	0.8605448968208597	0.885748871694192	1.0	13.134463942100366	-5.476434745396533	18.238904945042155	0.8465136102196629	0.8542856720090355	0.0	0.08596651432399433	0.0	0.0	0.0206203210413213	0.0	3.338606653904619e-06	5.476434745396533	0.00777206178937262	
SMGTGDTPGLEVPS(ph)SPLRK	ddPTM_K562_Methotrexat_30min_R1	6	SMGTGDTPGLEVPSSPLRK	19	1	C9J0I9;Q86WB0;Q86WB0-2	C9J0I9	ZC3HC1	Nuclear-interacting partner of ALK	1	SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;SMGTGDTPGLEVPS(0.5)S(0.5)PLRK;SMGTGDTPGLEVPS(0.529)S(0.471)PLRK;SMGTGDTPGLEVPS(0.56)S(0.44)PLRK	123.17	2.0481999999999998e-05	1893777800.0	18627.7	14678.92	26439.499999999996	22257.4	15354.7	13946.300000000001	12878.66	16847.6	18419.5	22299.3	True	False	17808.848612178204	17104.362031021436	20890.21026714568	20306.128298842817	17374.11218609312	16641.225096127095	15767.02733973849	16255.060358689418	17563.18146539679	18260.680685365005	0.9752565591079569	0.9366771330013837	1.143999537973856	1.1120137660102196	0.9514493180978503	0.9113146099457388	0.8634413804943728	0.8901672746359894	0.9618032190592312	1.0	14.156452923792578	-7.940072956489319	6.7006758853266435	0.9163299688485351	1.0414584136216654	0.41154898020043484	0.0659230568006823	0.21167625856402877	18.54408049082614	0.022148999831627082	0.025113464626368393	1.1479607610634533e-08	7.940072956489319	0.12512844477313023	
SMGTGDTPGLEVPSS(ph)PLR	ddPTM_K562_Methotrexat_30min_R1	11	SMGTGDTPGLEVPSSPLR	18	0	C9J0I9;Q86WB0;Q86WB0-2	C9J0I9	ZC3HC1	Nuclear-interacting partner of ALK	1	SMGTGDTPGLEVPS(0.027)S(0.973)PLR;SMGTGDTPGLEVPS(0.027)S(0.973)PLR;SMGTGDT(0.005)PGLEVPS(0.061)S(0.934)PLR;SMGTGDTPGLEVPS(0.066)S(0.934)PLR;SMGTGDTPGLEVPS(0.154)S(0.846)PLR;SMGTGDTPGLEVPS(0.063)S(0.937)PLR;SMGTGDTPGLEVPS(0.057)S(0.943)PLR;SMGTGDTPGLEVPS(0.014)S(0.986)PLR;SMGTGDTPGLEVPS(0.027)S(0.973)PLR;SMGTGDTPGLEVPS(0.194)S(0.806)PLR;SMGTGDTPGLEVPS(0.024)S(0.976)PLR	289.58	5.407499999999997e-177	964384000.0	32457.12	30044.36	39108.8	37507.85	31139.119999999995	30890.17	30035.910000000003	33487.950000000004	33597.39	36979.67999999999	True	False	31030.343867858155	35008.679823198094	30900.39733337418	34219.5950251939	35234.46008428792	36859.258170814675	36772.22740129212	32310.159817349253	32035.454672152187	30282.301611574305	1.0247022919815956	1.1560772451264836	1.0204111209817563	1.1300196221582677	1.1635330938920718	1.2171881333064383	1.2143141519744085	1.066965128073352	1.0578936529681682	1.0	14.886187241326615	-5.5197664114769	18.433653261577824	1.114495050470355	1.1029688336873216	0.0	0.07769877527683589	0.0	0.0	0.018217044371859004	0.0	3.0215764608372562e-06	5.5197664114769	-0.01152621678303345	
SMKTTSDRSREQTNT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SMKTTSDRSREQTNTR	16	3	H0YAS5;A0A087X298;Q86X45	H0YAS5	LRRC6	Protein tilB homolog	1	SMKT(0.002)T(0.001)S(0.017)DRS(0.017)REQT(0.357)NT(0.606)R	53.946000000000005	0.031268000000000004	0.0	0.0	0.0	212.8	184.16	141.82	0.0	0.0	0.0	128.27	58.655	True	False	0.0	0.0	168.13618808406358	168.0149787268455	160.47181581090655	0.0	0.0	0.0	122.30675569730157	48.03201112142914	0.0	0.0	3.500502772182504	3.4979792601664936	3.3409347654675483	0.0	0.0	0.0	2.546359247546378	1.0	5.585924311003172	-8.276821070783592	24.937155502346684	0.6024423518442378	2.1120407553643914	0.19065179988046932	1.3894582484014466	1399.7336094281566	2269273.206774816	0.5402458804647784	0.47818376167138404	5.286630159412091e-09	8.276821070783592	1.5095984035201537	
SMNPNVSMVSS(ph)AS(ph)SSPSSSR	ddPTM_K562_Methotrexat_30min_R1	1	SMNPNVSMVSSASSSPSSSR	20	0	C9JR56;Q9UPW6-2;Q9UPW6	C9JR56	SATB2	DNA-binding protein SATB;DNA-binding protein SATB2	2	S(0.001)MNPNVS(0.098)MVS(0.203)S(0.703)AS(0.436)S(0.149)S(0.352)PS(0.049)S(0.008)SR	86.49799999999999	0.0025456999999999997	0.0	550.6	504.49	685.41	578.1	317.56	416.92	606.37	517.09	490.46	684.34	True	False	526.3962832698247	587.8483976362018	541.5518076818515	527.4188705581529	359.3247061691686	497.4838894242422	742.3639080461187	498.9036516105981	467.6586216519726	560.3993946098168	0.9393234331317095	1.048981143253191	0.9663675815690557	0.9411481804425808	0.6411939584969605	0.8877309544037247	1.3247050499813555	0.8902644371305296	0.8345095054529533	1.0	9.130311587024742	-11.517160789924644	19.581919317337135	1.0000007661914723	0.9447960010845705	0.011062625000494042	0.16317519430508068	0.0	0.0	0.16651216848518252	0.04038513285970894	3.0397593996454364e-12	11.517160789924644	-0.055204765106901754	
SMNPNVSMVSS(ph)ASSS(ph)PSSSR	ddPTM_K562_Methotrexat_30min_R1	1	SMNPNVSMVSSASSSPSSSR	20	0	C9JR56;Q9UPW6-2;Q9UPW6	C9JR56	SATB2	DNA-binding protein SATB;DNA-binding protein SATB2	2	SMNPNVS(0.03)MVS(0.209)S(0.745)AS(0.194)S(0.145)S(0.415)PS(0.256)S(0.004)SR	88.57	0.0020906999999999996	0.0	510.84	646.38	686.28	387.28	553.0	707.79	643.7	694.75	702.58	639.8	True	False	488.384085262545	753.1833084185778	542.2392065711052	353.32776369098997	625.7291929447988	844.5604003060163	788.0661108057566	670.3152487119518	669.9172091510886	523.9260202112416	0.9321623023525984	1.437575686954624	1.0349537638013855	0.6743848369060422	1.1943082969853476	1.611984073563474	1.5041553204172153	1.2794082043142037	1.2786484795715716	1.0	9.033219303428067	-8.001563595642173	24.999945655180642	1.3673580255091817	1.0361532690103505	0.2871115827352486	0.23063906712231247	76.86211176064344	1228964.1387522488	0.07415920852661247	0.0829288250827997	9.964061613351463e-09	8.001563595642173	-0.3312047564988312	
SMNPNVSMVSSASS(ph)SPSSSR	ddPTM_K562_Methotrexat_30min_R1	1	SMNPNVSMVSSASSSPSSSR	20	0	C9JR56;Q9UPW6-2;Q9UPW6	C9JR56	SATB2	DNA-binding protein SATB;DNA-binding protein SATB2	1	S(0.002)MNPNVS(0.038)MVS(0.106)S(0.009)AS(0.016)S(0.507)S(0.114)PS(0.195)S(0.012)S(0.001)R	79.462	0.0026829999999999996	16445000.0	3164.4	2922.5	3226.2	2933.1	2853.2	2379.1	2798.7	3257.1	2818.3	3724.0	True	False	3025.2967649455763	3405.393450993679	2549.064708631607	2675.959676931531	3228.4458106873412	2838.8274041284058	3426.3797177444003	3142.5459468581444	2687.2778481461364	3049.547513702194	0.992047755069349	1.1166881105123307	0.8358829292471021	0.8774940101467308	1.0586638824879178	0.9309011882494098	1.1235698746614138	1.0304958138012577	0.8812054365677822	1.0	11.57437947875855	-7.786209640314795	24.998711415361473	1.0079737445599872	0.9584934125018048	0.06043017238189097	0.09287565740684281	769.0771275829899	776165.7024313613	0.03009601866998889	0.03413985986060372	1.636026596760515e-08	7.786209640314795	-0.049480332058182475	
SMNPNVSMVSSASSS(ph)PSSSR	ddPTM_K562_Methotrexat_30min_R1	6	SMNPNVSMVSSASSSPSSSR	20	0	C9JR56;Q9UPW6-2;Q9UPW6	C9JR56	SATB2	DNA-binding protein SATB;DNA-binding protein SATB2	1	SMNPNVS(0.018)MVS(0.136)S(0.136)AS(0.136)S(0.136)S(0.389)PS(0.034)S(0.01)S(0.003)R;SMNPNVS(0.034)MVS(0.017)S(0.001)AS(0.005)S(0.229)S(0.666)PS(0.037)S(0.009)S(0.003)R;SMNPNVSMVS(0.001)S(0.001)AS(0.002)S(0.096)S(0.792)PS(0.099)S(0.005)S(0.005)R;SMNPNVSMVSSAS(0.002)S(0.046)S(0.904)PS(0.046)S(0.001)SR;SMNPNVS(0.003)MVS(0.056)S(0.056)AS(0.037)S(0.4)S(0.446)PS(0.002)S(0.001)SR;SMNPNVSMVSSAS(0.001)S(0.047)S(0.891)PS(0.047)S(0.015)SR	161.59	4.5561e-14	63732900.0	10167.85	8616.98	13721.58	10984.859999999999	9416.52	9311.76	8647.300000000001	10083.87	10220.470000000001	12009.269999999999	True	False	9720.883488639825	10040.789481383581	10841.60787448555	10021.834378895392	10654.957432095038	11111.125832737898	10586.677147693992	9729.214576508077	9745.322580506747	9834.274830794393	0.988469781035659	1.0209994792846873	1.1024308412183947	1.019072026288475	1.0834512575071438	1.1298368231427964	1.076508164541383	0.989316929199768	0.9909548744754308	1.0	13.263602958255007	-9.2671256494631	24.30860487261103	0.9926019163878826	1.0622344447515324	0.36899156827927704	0.03989047865809609	373.6527197623327	1597334.2316100234	0.022657370156199837	0.011356875574087676	5.405978953021741e-10	9.2671256494631	0.06963252836364975	
SMNS(ph)VT(ph)RNLY(ph)HR	ddPTM_K562_Methotrexat_30min_R1	2	SMNSVTRNLYHR	12	1	K7EPW0;K7EP61;Q96BD8-2;Q96BD8	K7EPW0	SKA1	Spindle and kinetochore-associated protein 1	3	S(0.119)MNS(0.881)VT(1)RNLY(1)HR;S(0.033)MNS(0.968)VT(1)RNLY(1)HR	58.04	0.027536	42130000.0	4481.5	4931.0	9073.6	6549.9	4592.1	4743.200000000001	4234.1	3295.7	3725.0	3458.2	True	False	4284.498625996584	5745.763937330992	7169.175358080635	5975.680436375787	5196.041640003272	5659.756270548466	5183.704706793001	3179.788362979456	3551.825563050192	2831.886469356853	1.5129485847536934	2.0289527844793533	2.5315899615526676	2.1101412436681892	1.8348340218537573	1.9985816281094941	1.8304775854839501	1.1228516387881944	1.2542259732103045	1.0	11.467547713437872	-9.179479504130486	2.7809620663053516	1.117869456453916	2.0242853144698456	0.7195939784359534	0.24519652688348023	0.15833645631294174	2.3677509532397285	0.15186616224860444	0.07450445945710894	6.614857545645507e-10	9.179479504130486	0.9064158580159296	
SMPPSLETS(ph)PITDTDLAKR	ddPTM_K562_Methotrexat_30min_R1	1	SMPPSLETSPITDTDLAKR	19	1	A0A499FJI4;O75592-2;O75592	A0A499FJI4	MYCBP2	E3 ubiquitin-protein ligase MYCBP2	1	S(0.13)MPPS(0.043)LET(0.071)S(0.752)PIT(0.003)DTDLAKR	50.236999999999995	0.026792000000000003	6151100.0	1108.5	886.88	1341.3	836.59	756.11	913.2	768.05	835.02	1178.1	1124.2	True	False	1059.7716672804224	1033.4218456175442	1059.7794599490342	763.2474535897676	855.5517180424798	1089.662975684108	940.3047637165783	805.6518733061582	1123.3303881421302	920.5964862792707	1.1511793528168341	1.1225567998790373	1.1511878176206085	0.8290792599856068	0.9293449744744529	1.1836488536776248	1.0214081606122152	0.8751411561023023	1.2202201560449564	1.0	9.846425125887311														
SMRRSLS(ph)SS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	SMRRSLSSSK	10	2	A0A0A0MS79;O14513	A0A0A0MS79	NCKAP5	Nck-associated protein 5	2	SMRRS(0.227)LS(0.599)S(0.182)S(0.993)K	88.134	0.028025	14100000.0	428.51	755.71	610.51	419.2	318.15	448.4	453.04	411.74	424.4	479.62	True	False	409.6732134833864	880.5782326263245	482.3722941127899	382.44938684998726	359.9923015106465	535.0469538948246	554.6457524303871	397.25887082354626	404.66973663315486	392.7561703871763	1.043072634809361	2.2420481179411045	1.228172414547353	0.9737578062057467	0.9165796202661018	1.3622878371773994	1.412188513508575	1.0114643658734406	1.0303332376273917	1.0	8.617490130900949	-6.9762813437465265	24.973677687844056	1.1163185476318251	1.665698268490766	0.32089585534872955	0.309841707713303	234.7991212313682	247220.1679762371	0.0772856441961017	0.16087111751356348	1.0561331056048404e-07	6.9762813437465265	0.5493797208589408	
SMS(ph)APSDLEMIGNEDLEFTR	ddPTM_K562_Methotrexat_30min_R1	1	SMSAPSDLEMIGNEDLEFTR	20	0	F8VWT9;J3KPF0;Q9Y4D8-2;Q9Y4D8-4;Q9Y4D8	F8VWT9	HECTD4	Probable E3 ubiquitin-protein ligase HECTD4	1	S(0.23)MS(0.756)APS(0.014)DLEMIGNEDLEFTR	61.957	0.021491999999999997	7461200.0	923.8	637.43	928.46	870.95	567.16	657.17	610.52	933.53	731.59	966.24	True	False	883.1908581268866	742.7544730425666	733.5889341566248	794.5951657371099	641.7514811402744	784.1588017195845	747.4446511870913	900.6972207701587	697.5785405830577	791.2445729429666	1.1162046329644115	0.9387166730003023	0.9271329741044585	1.0042345854982375	0.8110658866870134	0.9910447774737625	0.9446442689736686	1.1383297296057175	0.8816218959815092	1.0	9.627979889067527														
SMS(ph)APVIFDR	ddPTM_K562_Methotrexat_30min_R1	3	SMSAPVIFDR	10	0	D6RC15;O60749	D6RC15	SNX2	Sorting nexin-2	1	S(0.035)MS(0.965)APVIFDR;S(0.049)MS(0.951)APVIFDR;S(0.031)MS(0.969)APVIFDR	132.17	0.00097308	163796000.0	6445.5	5997.200000000001	7355.200000000001	7156.5	6314.9	5308.7	5541.92	6587.6	6444.0	7402.799999999999	True	False	6162.16353762378	6988.135365029699	5811.4440347551945	6529.10075618305	7145.42003711954	6334.531142153114	6784.836633209013	6355.910374112777	6144.419846522267	6062.081185401336	1.0165095697602107	1.1527617581002512	0.9586549333503278	1.077039478109661	1.178707413936833	1.0449433038620284	1.1192256298955896	1.048470018748518	1.0135825731465322	1.0	12.565597457964072	-9.647856843613598	3.144072325305938	1.0043516412891083	1.0793401772496016	0.17943446743163227	0.06060465254559429	0.43375030945699045	7.9993067497087145	0.050193639870389474	0.015654323256292922	2.249796083368464e-10	9.647856843613598	0.07498853596049337	
SMS(ph)ASSGLSAR	ddPTM_K562_Methotrexat_30min_R1	1	SMSASSGLSAR	11	0	H0Y7V8;A0A0A0MRJ1;H0Y5V1;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-2;Q5VT25-6	H0Y7V8	CDC42BPA	Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha	1	S(0.267)MS(0.671)AS(0.022)S(0.04)GLSAR	80.17	0.025557	25784000.0	3562.8	3260.8	4702.7	4223.3	3548.4	3194.9	3425.6	3571.8	4031.5	4121.8	True	False	3406.1835779762637	3799.591775876883	3715.667536197959	3853.049846096258	4015.0767961036563	3812.2692082929857	4193.878000895135	3446.177769484486	3844.0764449494923	3375.302078941379	1.009149254885231	1.1257042146190888	1.1008399987011923	1.1415422252531302	1.1895459138765248	1.129460154715591	1.2425193072527874	1.02099832515297	1.1388836776811213	1.0	11.720800909281374	-6.258570458589061	5.5119482073931225	1.1281871338743945	1.004648722302992	0.191041371639174	0.06767767702176616	0.2341753127566109	27.60108440012635	0.016165631905254323	0.10889135600120407	5.513527453668506e-07	6.258570458589061	-0.12353841157140244	
SMS(ph)TQAPL	ddPTM_K562_Methotrexat_30min_R1	1	SMSTQAPL	8	0	A0A0G2JNG8;A0A0G2JPF3;Q8IUH8	A0A0G2JNG8	SPPL2C	Signal peptide peptidase-like 2C	1	S(0.018)MS(0.761)T(0.22)QAPL	94.40899999999999	0.014535	3062500.0	0.0	0.0	0.0	64.513	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	58.857245452894134	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
SMSQVDVDS(ph)GIENMEVDENDRR	ddPTM_K562_Methotrexat_30min_R1	2	SMSQVDVDSGIENMEVDENDRR	22	1	O95155;O95155-4;O95155-2	O95155	UBE4B	Ubiquitin conjugation factor E4 B	1	S(0.006)MS(0.008)QVDVDS(0.986)GIENMEVDENDRR;S(0.01)MS(0.013)QVDVDS(0.977)GIENMEVDENDRR	49.655	0.019403999999999998	232680000.0	4783.2	4039.0	5036.6	4817.5	4219.3	4086.5	4207.9	4719.1	4849.5	5628.2	True	False	4572.936255241964	4706.376098738565	3979.4864892114397	4395.157254651271	4774.211905591296	4876.158289677076	5151.6286898548115	4553.126578188659	4624.047803493131	4608.878441626927	0.9922015330106482	1.021154312995337	0.8634392378998581	0.9536283740865569	1.0358728193981195	1.0579923839249272	1.1177618926387423	0.9879033773304318	1.0032913347701244	1.0	12.170200002005842	-7.766900610310926	9.129457637863446	1.0386739539487613	0.955357640665599	0.34543657361349067	0.05108691676450314	0.13970283292110258	124.9768724840877	0.016525125281015796	0.01971451515741235	1.7104067023787524e-08	7.766900610310926	-0.08331631328316225	
SMSSIPPYPASS(ph)LASSSPPGSGR	ddPTM_K562_Methotrexat_30min_R1	1	SMSSIPPYPASSLASSSPPGSGR	23	0	A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2	A0A2R8Y7R9	PPFIA1	Liprin-alpha-1	1	SMSSIPPYPAS(0.171)S(0.751)LAS(0.016)S(0.016)S(0.046)PPGSGR	115.56	2.2585e-06	21116000.0	5622.9	4848.8	5865.5	5761.4	4851.7	4843.8	4735.6	5604.7	5642.9	6510.2	True	False	5375.724048670356	5649.981784492094	4634.4117068001615	5256.30700715056	5489.78359025367	5779.795796779106	5797.678847804474	5407.579524225798	5380.562810667367	5331.139694872182	1.008363006101877	1.0598074910561046	0.8693097483935421	0.9859630975730009	1.0297579700517099	1.0841576337492091	1.0875120855266722	1.0143383654769242	1.0092706472956847	1.0	12.380228271000222	-7.794743816402541	4.411407750814916	1.0440057812396026	0.9780378041571455	0.21968305896974272	0.05198842650670499	0.30459086570645916	13.284167709523253	0.017089716251065215	0.02034958036601853	1.6041913993384423e-08	7.794743816402541	-0.06596797708245716	
SMSSIPPYPASSLASSS(ph)PPGSGR	ddPTM_K562_Methotrexat_30min_R1	2	SMSSIPPYPASSLASSSPPGSGR	23	0	A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2	A0A2R8Y7R9	PPFIA1	Liprin-alpha-1	1	SMSSIPPYPAS(0.245)S(0.245)LAS(0.095)S(0.095)S(0.321)PPGSGR;SMSSIPPYPAS(0.2)S(0.2)LAS(0.112)S(0.112)S(0.377)PPGSGR	140.56	9.7816e-14	41148000.0	7248.7	6721.0	8776.0	7872.099999999999	6916.9	6907.599999999999	6279.0	7189.599999999999	7613.9	8603.7	True	False	6930.0558273483075	7831.531012533278	6934.037531136008	7181.965215223717	7826.59358893287	8242.395938278078	7687.225586063918	6936.737692895925	7259.931450874593	7045.4865584424115	0.983616357772227	1.1115670929992723	0.9841815002580826	1.0193710761704267	1.1108663005757182	1.169883140065244	1.0910851255336693	0.9845647472826166	1.0304372012711056	1.0	12.782483626571453	-9.26171222318796	24.998389233978088	1.0056257297732876	1.069522342225368	0.20043241396636058	0.05681830586179927	42.986655534502674	3937885.1962195216	0.030925596445458652	0.01636119524190981	5.473785525265385e-10	9.26171222318796	0.06389661245208034	
SNDRNS(ph)MDIQCEVDALLER	ddPTM_K562_Methotrexat_30min_R1	2	SNDRNSMDIQCEVDALLER	19	1	Q02241-2;A0A2U3TZL8;Q02241;H7BYN4;A0A2R8Y531;H0YME6	Q02241-2	KIF23	Kinesin-like protein KIF23;Kinesin-like protein	1	S(0.051)NDRNS(0.949)MDIQCEVDALLER;S(0.376)NDRNS(0.624)MDIQCEVDALLER	81.854	0.0053434	5463700.0	1115.04	1048.48	1273.95	1068.24	1080.1399999999999	819.1	1013.13	1187.37	1050.6799999999998	1217.28	True	False	1066.024176711197	1221.7234988872033	1006.5653045568275	974.5890577495956	1222.1973426173495	977.3794824604166	1240.3501923887475	1145.6095240922773	1001.8341161303566	996.8187963156294	1.069426239404152	1.2256224535520905	1.0097776128191227	0.9776993184235713	1.226097809486286	0.9804986483731417	1.244308591464408	1.1492655719641298	1.0050313254859002	1.0	9.961187462285594	-9.776026960559607	24.061910633096893	1.0025154237241252	1.1104030986833429	0.16756591971381085	0.096127234058643	309.6965391485553	510813.47373330133	0.08905516550460857	0.023462977454367588	1.6748389005040783e-10	9.776026960559607	0.1078876749592177	
SNEDS(ph)LILEK	ddPTM_K562_Methotrexat_30min_R1	1	SNEDSLILEK	10	0	A0A0U1RRH6;O94880	A0A0U1RRH6	PHF14	PHD finger protein 14	1	S(0.001)NEDS(0.999)LILEK	113.25	0.0027221	3654900.0	979.44	784.91	1008.1	1199.6	811.97	661.56	624.19	961.05	1017.1	1123.0	True	False	936.3849903483417	914.6030363111882	796.5135865016191	1094.4329304991527	918.7582871526	789.3971070888939	764.1804966659083	927.249326771674	969.8152430009003	919.6138179075087	1.0182371905622234	0.9945512110640943	0.866139210820046	1.1901005717698194	0.9990696847543511	0.8584006587516158	0.8309797893258349	1.008302951429698	1.0545896811420472	1.0	9.844884333600357	-8.021373278358746	24.668843579559784	0.9418651225140108	1.0160590661812783	0.09590178916561864	0.0964344802408674	1564.6728170186507	1805928.1776122977	0.033249020683381474	0.033574750182243034	9.519775826188842e-09	8.021373278358746	0.0741939436672675	
SNIHSSVMAS(ph)PGGLSAVR	ddPTM_K562_Methotrexat_30min_R1	2	SNIHSSVMASPGGLSAVR	18	0	Q9NQW6-2;Q9NQW6;H7C3S1;H7C1C2	Q9NQW6-2	ANLN	Actin-binding protein anillin	1	SNIHSSVMAS(0.981)PGGLS(0.019)AVR;S(0.002)NIHS(0.062)S(0.201)VMAS(0.73)PGGLS(0.005)AVR	94.72	0.019562	41775000.0	5811.9	4326.4	5958.0	5529.7	5028.299999999999	4462.5	4339.8	4973.1	5261.200000000001	6378.2	True	False	5556.415834972568	5041.26406377384	4707.497220887455	5044.919786413104	5689.609585685948	5324.8149682329495	5313.110622455835	4798.193254220085	5016.607960354275	5223.046173978333	1.0638266731500692	0.9651961510296141	0.9012934337706247	0.9658960725921455	1.0893278359345309	1.019484567217046	1.0172436630804091	0.9186580195528613	0.9604755143363366	1.0	12.350675742474326	-11.730830498596314	0.0029910442592135647	0.4175045924942981	1.5458554044672153	0.004573445844407442	0.056486827970553384	706123.8506812619	449.05279378852794	86047.2986224079	83363.838954206	1.858529681719032e-12	11.730830498596314	1.128350811972917	
SNIS(ph)PNFNFMGQLLDFER	ddPTM_K562_Methotrexat_30min_R1	1	SNISPNFNFMGQLLDFER	18	0	Q99956;F8VW29;Q16828-2;Q16829-2;Q16828;Q16829	Q99956	DUSP9;DUSP6;DUSP7	Dual specificity protein phosphatase 9;Dual specificity protein phosphatase 6;Dual specificity protein phosphatase 7	1	S(0.002)NIS(0.998)PNFNFMGQLLDFER	76.378	0.012234	6853800.0	1618.9	542.6	524.43	1272.9	788.63	544.27	1062.1	2767.7	2527.4	3864.3	True	False	1547.7350944161271	632.2554273769616	414.359309759988	1161.3068333047438	892.3486680507347	649.4424745681002	1300.3029614522209	2670.3584222527065	2409.901725651828	3164.4378241673967	0.48910270336038464	0.1998002370431519	0.13094247154911667	0.36698677548208686	0.2819927954455932	0.2052315484311899	0.4109112056244451	0.843865030893856	0.7615576160943859	1.0	11.627733506172062	-9.193674676292106	2.9063082267752463	0.8691688832173207	0.27298962210184546	0.8573414120869136	0.10773154495433641	0.0953259928911375	1.569273309143909	0.061591456780397645	0.03022432182075497	6.402142311164183e-10	9.193674676292106	-0.5961792611154753	down
SNLDEEVNVIPPHT(ph)PVR	ddPTM_K562_Methotrexat_30min_R1	1	SNLDEEVNVIPPHTPVR	17	0	A0A3B3IS71;P06400	A0A3B3IS71	RB1	Retinoblastoma-associated protein	1	SNLDEEVNVIPPHT(1)PVR	120.63	0.00057008	15020000.0	1903.5	1827.0	1770.0	1665.4	1810.7	1532.5	1561.3	2102.9	2166.5	2440.7	True	False	1819.8244191865442	2128.88069630982	1398.5011884811686	1519.3969677003072	2048.838787821241	1828.6339358693542	1911.4612689156872	2028.9398150649347	2065.7798878787244	1998.6655791334417	0.9105197178487272	1.065151028033832	0.6997174530255905	0.7602057010253159	1.0251033535633074	0.914927417053028	0.9563687336550002	1.0151472243518693	1.0335795590047543	1.0	10.964821382213753	-8.610695872855947	1.120573219803047	1.0166184520793862	0.8777127606851252	0.23619807228433354	0.10067588894159067	0.8092039205832682	2.0672251602320135	0.06869931678207516	0.044814607021861026	2.450778869130743e-09	8.610695872855947	-0.138905691394261	
SNLDEEVNVIPPHTPVR	ddPTM_K562_Methotrexat_30min_R1	1	SNLDEEVNVIPPHTPVR	17	0	A0A3B3IS71;P06400	A0A3B3IS71	RB1	Retinoblastoma-associated protein	0		47.506	0.033667	14014000.0	383.14	358.53	259.41	348.89	361.58	392.84	313.51	422.05	413.5	212.92	False	True	366.2976243588823	417.7709885319977	204.963386047401	318.30335538667	409.13410774860813	468.75077022311103	383.82259810270733	407.20626227978283	394.27647525402847	174.35812476301575	2.100834846995212	2.396051168248248	1.1755310303204014	1.8255722572108517	2.34651587532669	2.6884366350018283	2.2013462155800982	2.335459060673254	2.261302567860956	1.0	7.445909782350516	-7.754450597712859	24.906906536809153	2.236221156472562	1.8618249325702165	0.041084352661047596	0.5070933946003293	361.7340217614029	1289155.0849681522	0.14742864914524334	0.1861249098413407	1.7601488745759723e-08	7.754450597712859	-0.3743962239023455	
SNS(ph)APLIHGLSDTSPVFQAEAPSAR	ddPTM_K562_Methotrexat_30min_R1	2	SNSAPLIHGLSDTSPVFQAEAPSAR	25	0	Q96E09	Q96E09	FAM122A	Protein FAM122A	1	S(0.21)NS(0.79)APLIHGLSDTSPVFQAEAPSAR;S(0.059)NS(0.941)APLIHGLSDTSPVFQAEAPSAR	166.6	1.2289000000000001e-25	286300000.0	5169.700000000001	4338.799999999999	6202.700000000001	5904.9	4757.5	4668.3	4094.7000000000003	5718.0	5665.5	6873.700000000001	True	False	4942.446178024	5055.7129530098755	4900.838034910813	5387.226584948684	5383.194639122745	5570.382905591458	5013.040708274554	5516.894699006751	5402.112141600233	5628.806322485168	0.8780629310837376	0.8981856300178639	0.8706709298796853	0.9570815331535827	0.9563652274939204	0.9896206382763025	0.8906045831154575	0.9801180539768498	0.9597260648355641	1.0	12.458613293074379	-3.000000000000009	0.2060130022750462	0.9913858803629608	0.3791819466398301	0.5548618905919622	0.030873646506572403	40.99961536061853	0.5040820362185298	0.055341731890849025	8.179162274866815	0.0009999999999999796	3.000000000000009	-0.6122039337231306	
SNS(ph)FNNPLGNR	ddPTM_K562_Methotrexat_30min_R1	2	SNSFNNPLGNR	11	0	O95835-2;O95835	O95835-2	LATS1	Serine/threonine-protein kinase LATS1	1	S(0.001)NS(0.999)FNNPLGNR;S(0.018)NS(0.982)FNNPLGNR	165.51	7.4977e-05	170942000.0	2738.3999999999996	2349.6	3275.7	2920.3999999999996	2237.1000000000004	2226.9	2599.7	2530.3	2636.7	2938.1000000000004	True	False	2618.023214867577	2737.8314636286564	2588.1753350891295	2664.373066213508	2531.3178617302146	2657.216908181055	3182.7489020688595	2441.3079148123084	2514.1203925085756	2405.9816192288977	1.0881310122837253	1.1379270073169199	1.0757253149417758	1.1073954368227565	1.052093599344074	1.1044211173286838	1.3228483861355977	1.014682695537272	1.044945801919441	1.0	11.2324099055848	-12.36456723016311	2.983977389472041	0.9986378010650361	1.1076354325383495	0.13391958880016464	0.08018625657238838	31174108.01208153	40577152.259617984	373953.4072170628	0.021260708067130495	4.3194929532146367e-13	12.36456723016311	0.10899763147331343	
SNS(ph)GLATYSPPMGPVSER	ddPTM_K562_Methotrexat_30min_R1	1	SNSGLATYSPPMGPVSER	18	0	H0Y465;P21359-2;P21359-6;P21359;J3KSB5;P21359-4	H0Y465	NF1	Neurofibromin;Neurofibromin truncated	1	S(0.052)NS(0.863)GLAT(0.055)YS(0.029)PPMGPVSER	159.04	1.3854e-41	0.0	1211.9	911.41	1445.5	1590.2	1236.7	1252.9	1119.7	1291.4	1119.4	1392.3	True	False	1158.6263270880863	1062.0050111788353	1142.1093039262876	1450.7896349447753	1399.3477267899318	1495.0051929857855	1370.8212276980041	1245.9807300275118	1067.3593383297687	1140.1409783371544	1.0162132131921897	0.9314681529364228	1.0017263878998577	1.272465127129005	1.2273462259297259	1.3112459085245625	1.2023260752343863	1.09283040755602	0.9361643503827618	1.0	10.154996509203741	-7.12299683065983	6.493564594280209	1.1646422425848064	0.9723639653345835	0.3080292470054924	0.11253779442582618	0.27496728866611686	13.370210331719946	0.032519243820556286	0.057051734675181834	7.533610614981647e-08	7.12299683065983	-0.19227827725022295	
SNS(ph)GRELTDEEILASVMIK	ddPTM_K562_Methotrexat_30min_R1	1	SNSGRELTDEEILASVMIK	19	1	Q5JSH3-4;Q5JSH3-2;Q5JSH3;H7BY83	Q5JSH3-4	WDR44	WD repeat-containing protein 44	1	S(0.132)NS(0.591)GRELT(0.277)DEEILASVMIK	82.475	0.0054751999999999995	23970000.0	5644.7	3605.0	7342.2	6063.9	3770.6	3554.5	3434.3	4853.1	5343.6	7537.3	True	False	5396.565746772937	4200.664975477229	5801.172557099676	5532.287301812108	4266.499990809506	4241.356818954403	4204.529197359343	4682.413722236737	5095.1772023396	6172.221932069695	0.874331125187415	0.6805758155991395	0.9398839868278039	0.8963202170465375	0.6912421552182985	0.687168553826154	0.6812018821801281	0.7586269213535247	0.8255012957110348	1.0	12.59157422190126	-5.878277745756117	17.932767248233876	0.7850267597070574	14.484722800567344	0.03526284123784584	0.11179311910970575	686.735287208094	101263.70149465643	0.027312280134115262	342.4416762947135	1.323494845536818e-06	5.878277745756117	13.699696040860287	
SNS(ph)PLPVPPSK	ddPTM_K562_Methotrexat_30min_R1	2	SNSPLPVPPSK	11	0	Q13247-3;Q13247	Q13247-3	SRSF6	Serine/arginine-rich splicing factor 6	1	S(0.001)NS(0.563)PLPVPPS(0.436)K;S(0.217)NS(0.782)PLPVPPS(0.001)K	115.83	0.0024555	129177000.0	10328.5	7922.799999999999	17688.6	10960.1	8133.0	7265.8	6530.5	9379.0	8883.1	12244.599999999999	True	False	9874.471506996699	9231.908035426082	13976.004589021466	9999.24504965302	9202.632054647462	8669.813018753384	7995.1308631614	9049.135253932198	8470.126619900988	10026.984287400073	0.9847897656930586	0.9207063430853197	1.3938392829221582	0.9972335413169131	0.9177866236622616	0.8646481105638001	0.7973614632275924	0.9024782521404126	0.8447332096196226	1.0	13.291600146236062	-7.670743797423024	3.632818745505918	0.8757266208018117	1.0959484838763216	0.3571932351498036	0.1260629573080708	0.2484555235246523	6.361498391770077	0.039362939703840576	0.05122228160895657	2.1343036278055178e-08	7.670743797423024	0.22022186307450986	
SNS(ph)TSSMSSGLPEQDR	ddPTM_K562_Methotrexat_30min_R1	1	SNSTSSMSSGLPEQDR	16	0	P42684-2;P42684-6;P42684-3;P42684	P42684-2	ABL2	Abelson tyrosine-protein kinase 2	1	S(0.002)NS(0.906)T(0.086)S(0.005)SMSSGLPEQDR	105.2	0.00094295	9313300.0	2720.8	2249.7	2728.7	2311.8	2263.9	2628.0	1869.6	2388.5	2726.0	2599.8	True	False	2601.1968897939328	2621.4246866383164	2155.9831598918427	2109.128083301049	2561.6425314787166	3135.8238065022283	2288.905391894428	2304.4951011853127	2599.2688549999557	2128.9510274229206	1.221820913815318	1.2313222112072402	1.0126973951588	0.9906888679605435	1.203241642706815	1.4729431377752826	1.075132946888464	1.0824556654902893	1.2209152871620308	1.0	11.055927048305417	-12.293691491344887	3.265514133129804	0.9991890872068031	1.1647687082218086	0.1259190973798361	0.13248693871752032	105432590.76613994	153112648.36916903	847493.3611971427	0.036465520309203955	5.085205507225194e-13	12.293691491344887	0.16557962101500545	
SNS(ph)VGIQDAFNDGSDSTFQKR	ddPTM_K562_Methotrexat_30min_R1	3	SNSVGIQDAFNDGSDSTFQKR	21	1	O14497-2;O14497;A0A087WUV6;H0Y488;A0A1B0GTU5;O14497-3	O14497-2	ARID1A	AT-rich interactive domain-containing protein 1A	1	S(0.246)NS(0.75)VGIQDAFNDGS(0.004)DSTFQKR;S(0.388)NS(0.612)VGIQDAFNDGSDSTFQKR;S(0.052)NS(0.948)VGIQDAFNDGSDSTFQKR	130.26	6.6413e-09	99981000.0	3913.31	2318.36	4451.92	4201.67	2177.6800000000003	2088.75	2171.05	2752.1400000000003	2964.8900000000003	4286.85	True	False	3741.2855780650902	2701.429584617861	3517.5228310864854	3833.316114613513	2464.083090220668	2492.3713758871863	2657.9632280019223	2655.3456762722	2827.0529110421194	3510.4599245741774	1.065753678563618	0.769537223799969	1.0020119604450874	1.091969769482128	0.7019259992035272	0.7099842839509167	0.7571552688567826	0.7564096253268854	0.8053226562285978	1.0	11.77744434295091	-7.7712837240267945	24.999703016129143	0.7707971257944463	0.9685262298133775	0.40623879596227597	0.11312382120307897	196.73316698458495	499602.23246021045	0.03428498664856932	0.03934293300652217	1.693231253232455e-08	7.7712837240267945	0.1977291040189313	
SNSGLATYS(ph)PPMGPVSER	ddPTM_K562_Methotrexat_30min_R1	3	SNSGLATYSPPMGPVSER	18	0	H0Y465;P21359-2;P21359-6;P21359;J3KSB5;P21359-4	H0Y465	NF1	Neurofibromin;Neurofibromin truncated	1	SNSGLAT(0.144)YS(0.856)PPMGPVSER;SNS(0.002)GLAT(0.065)Y(0.045)S(0.861)PPMGPVS(0.027)ER;SNSGLAT(0.086)Y(0.326)S(0.582)PPMGPVS(0.006)ER	114.4	0.0004665	93042000.0	5631.4	5271.5	6811.3	6245.799999999999	5429.8	5420.3	5224.6	5939.4	5893.4	6972.200000000001	True	False	5383.850398847969	6142.525774820592	5381.701211921907	5698.2404112300765	6143.91387314949	6467.696262703207	6396.349545620249	5730.507935516031	5619.417120343624	5709.467018000655	0.9429689990105747	1.0758492439757688	0.9425925738697891	0.9980336856776326	1.076092366201455	1.1328021061006268	1.1203058929062921	1.0036852682481636	0.9842279677992493	1.0	12.479140360131769	-7.72729131480441	8.757344937810025	1.060394244710343	0.9924413423569803	0.21385801063844823	0.058018786404636875	0.4349345704500158	101.41646103400639	0.01812726063502442	0.023203012995983586	1.8737372263650705e-08	7.72729131480441	-0.0679529023533626	
SNST(ph)SSMSSGLPEQDR	ddPTM_K562_Methotrexat_30min_R1	1	SNSTSSMSSGLPEQDR	16	0	P42684-2;P42684-6;P42684-3;P42684	P42684-2	ABL2	Abelson tyrosine-protein kinase 2	1	S(0.003)NS(0.078)T(0.861)S(0.019)S(0.029)MS(0.01)SGLPEQDR	114.58	0.01496	9243300.0	2265.2	1917.6	2348.5	2087.9	1614.2	2164.9	1464.2	1922.3	2296.4	2369.2	True	False	2165.6245202738955	2234.450806373132	1855.5819441514245	1904.8570486738752	1826.495593583171	2583.236285653224	1792.5841221714911	1854.6916194299872	2189.640865231804	1940.1149219826086	1.1162351754198345	1.151710540986789	0.9564288811588544	0.9818269150403197	0.9414368050510484	1.3314862209365455	0.9239577005776775	0.9559699780746354	1.1286140013779207	1.0	10.921926397107391	-8.284186634586677	0.008438941966076268	1.7222850165211348e-07	2.0948408952910906	0.022454899475015777	0.12211613313544031	17983.768521791037	60.99455653170869	7399.882022419214	7736.180823709756	5.197725804141573e-09	8.284186634586677	2.094840723062589	
SNVSS(ph)PATPTASSSSSTTPTR	ddPTM_K562_Methotrexat_30min_R1	2	SNVSSPATPTASSSSSTTPTR	21	0	A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	SNVS(0.198)S(0.798)PAT(0.004)PTASSSSSTTPTR;SNVS(0.014)S(0.986)PATPTASSSSSTTPTR	197.1	3.8719000000000004e-22	11798300.0	2969.5	2760.6	4374.1	3908.2	2671.8	2671.0	2993.6	3827.8	2845.0	3608.0	True	False	2838.9643355789035	3216.742227823147	3456.0361856132654	3565.5741738719444	3023.1885311209985	3187.132947932822	3664.991004051754	3693.1741043823054	2712.736570973905	2954.556237765173	0.9608767297407399	1.0887395496848933	1.1697310551879736	1.2068053159038683	1.0232293068172358	1.078717983836236	1.2404539663878436	1.2499928270703091	0.918153642262643	1.0	11.528725744455135	-6.301822039626565	3.469357019817016	1.123831010758616	0.9474351517139379	0.14597368327118743	0.10414113410576867	0.454037038588571	9.486286418209893	0.026147217594701896	0.1969499192008001	4.990889566988771e-07	6.301822039626565	-0.17639585904467814	
SNVSSPAT(ph)PTASSSS(ph)STTPTRK	ddPTM_K562_Methotrexat_30min_R1	1	SNVSSPATPTASSSSSTTPTRK	22	1	A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	2	SNVS(0.002)S(0.012)PAT(0.984)PT(0.002)AS(0.022)S(0.05)S(0.172)S(0.484)S(0.061)T(0.172)T(0.038)PT(0.001)RK	96.46700000000001	0.00011012	12067000.0	1576.3	1397.8	2285.2	1868.6	1316.7	1424.7	1314.1	1775.2	1228.1	1805.5	True	False	1507.0077394083273	1628.7626914624345	1805.5677491057436	1704.782739188659	1489.8691290242616	1700.0031115387076	1608.8203762775274	1712.765209807062	1171.005899055555	1478.5064543472904	1.0192770785526393	1.101627041717229	1.2212105965427384	1.153043826204507	1.0076852384672121	1.1498110857346242	1.088138892831392	1.1584428358570737	0.7920194704679281	1.0	10.529924826148395	-9.751704658618204	24.999999999990674	0.896009714214489	1.1139742311996552	0.5593798118077571	0.0768118754339198	123.26043610954764	316554.12908737856	0.052032824893653684	0.01912535783370922	1.771313127948577e-10	9.751704658618204	0.21796451698516617	
SNVSSPAT(ph)PTASSSSST(ph)TPTR	ddPTM_K562_Methotrexat_30min_R1	1	SNVSSPATPTASSSSSTTPTR	21	0	A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	2	S(0.001)NVS(0.06)S(0.412)PAT(0.508)PT(0.018)AS(0.079)S(0.065)S(0.053)S(0.044)S(0.037)T(0.399)T(0.322)PT(0.002)R	99.603	0.0005007	0.0	782.67	682.79	1204.0	1133.8	784.72	711.48	1008.0	689.06	900.14	994.42	True	False	748.264763942597	795.6094420543958	951.2968536335173	1034.4015143380618	887.9244345165325	848.9634405822702	1234.069659301231	664.8253692370736	858.2926878722151	814.3209018731827	0.9188819324437864	0.9770220072016511	1.1682088123309236	1.2702627575426684	1.090386397394491	1.0425416302460113	1.5154586557492262	0.8164169281517587	1.0539981055354026	1.0	9.6694536234657	-12.777410510346884	4.215874141907966	0.9883413284078001	1.1011714373222623	0.022193658415046835	0.18445231179110302	0.02233118896516068	0.0011790401209443937	0.1973147329573644	0.043448461323816516	1.669511787263955e-13	12.777410510346884	0.11283010891446221	
SNVSSPAT(ph)PTASSSSSTTPTRK	ddPTM_K562_Methotrexat_30min_R1	1	SNVSSPATPTASSSSSTTPTRK	22	1	A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	SNVS(0.012)S(0.042)PAT(0.908)PT(0.038)ASSSSSTTPTRK	118.19	5.2849e-06	12748000.0	5140.0	3510.0	7110.9	6228.6	4159.3	4139.9	4391.8	4250.5	4919.8	6375.2	True	False	4914.051754462222	4089.967840201131	5618.419266198153	5682.548308525358	4706.320853915553	4939.877083918786	5376.7729461499475	4101.007505793664	4691.07957183741	5220.589503048928	0.9412829243885805	0.783430269285204	1.0762039924642388	1.0884878623777328	0.9014922263409081	0.9462297468578597	1.0299168212727328	0.7855449089415273	0.8985727702010906	1.0	12.349997008144266	-9.2477143005822	24.906862091093693	0.8815441158193187	0.9652682889888287	0.09993263747333703	0.09658005515603538	1552.8030623979919	2817875.3440035554	0.04722911884874289	0.027078473231244148	5.653087392996534e-10	9.2477143005822	0.08372417316950997	
SNVSSPATPT(ph)ASSSS(ph)STTPTRK	ddPTM_K562_Methotrexat_30min_R1	1	SNVSSPATPTASSSSSTTPTRK	22	1	A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	2	SNVS(0.006)S(0.021)PAT(0.119)PT(0.735)AS(0.112)S(0.15)S(0.149)S(0.417)S(0.153)T(0.062)T(0.061)PT(0.015)RK	66.732	0.015896	13301000.0	3297.3	2703.0	4791.3	3994.3	2789.9	2579.5	2564.7	2950.9	3603.6	4709.9	True	False	3152.3546400755413	3149.624806855742	3785.671606988597	3644.125920550819	3156.8207511694295	3077.9518679119096	3139.8992611209005	2847.1151744139593	3436.069422552396	3856.891470135863	0.8173303979342972	0.8166226172666438	0.9815343875505117	0.9448349658701832	0.8184883540573744	0.7980395330655974	0.8141010151396079	0.7381890821816841	0.8908908765408836	1.0	11.913222834906772	-7.791725612091873	24.92326281898977	0.8264727811149274	0.8913660427017744	0.051726556099659815	0.08070797979925454	419.44221687828644	345166.52293620264	0.025087897649597943	0.028450527590126902	1.615378833267607e-08	7.791725612091873	0.06489326158684705	
SNVSSPATPT(ph)ASSSSSTTPTRK	ddPTM_K562_Methotrexat_30min_R1	1	SNVSSPATPTASSSSSTTPTRK	22	1	A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	SNVS(0.001)S(0.004)PAT(0.166)PT(0.688)AS(0.087)S(0.032)S(0.008)S(0.003)S(0.003)T(0.003)T(0.003)PT(0.002)RK	70.12100000000001	0.0056036	11922000.0	1491.4	997.55	1903.4	1820.9	1175.9	745.28	972.98	1199.2	1230.9	1707.0	True	False	1425.839841751937	1162.3781820491854	1503.9023515000306	1661.2645241296314	1330.5514610918426	889.2948122184094	1191.1955328441595	1157.0234562869698	1173.6757276667076	1397.845758831805	1.0200265893023326	0.8315496718469122	1.075871455772673	1.1884462313767497	0.9518585671453473	0.6361895127554008	0.8521652158816541	0.827718973267771	0.8396317835864533	1.0	10.448989464227493	-8.01054704643155	24.858905769081332	0.8186138072927822	1.0247129907536565	0.3928451103710201	0.11601281105708927	488.21023961449674	1150691.0671357387	0.037847064302914415	0.040308146024295166	9.760070474097516e-09	8.01054704643155	0.2060991834608743	
SNVSSPATPTASSS(ph)SSTTPTR	ddPTM_K562_Methotrexat_30min_R1	1	SNVSSPATPTASSSSSTTPTR	21	0	A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	SNVSSPATPT(0.01)AS(0.01)S(0.01)S(0.194)S(0.194)S(0.194)T(0.194)T(0.194)PT(0.001)R	129.98	1.0275000000000001e-08	17074000.0	4298.6	3820.0	4932.7	4517.7	4069.3	3685.2	3968.0	4338.1	4513.5	5116.7	True	False	4109.638690998308	4451.190071102088	3897.393679333933	4121.640255181745	4604.484276401933	4397.31274418646	4857.925008042942	4185.526564141514	4303.668370154915	4190.016048163266	0.9808169333384317	1.0623324636318066	0.9301619933036757	0.9836812574950652	1.0989180526934625	1.049473962304766	1.1594048691466137	0.9989285282036762	1.0271245552965051	1.0	12.03274005425765	-7.744389059031753	24.95125765647008	1.0604678637322165	0.9902480046940261	0.26542204770812095	0.05374161588871947	321.49931621220026	470476.79844849237	0.0159939449815689	0.020594673371778907	1.8014032459674926e-08	7.744389059031753	-0.07021985903819039	
SNVSSPATPTASSSSS(ph)TTPTRK	ddPTM_K562_Methotrexat_30min_R1	1	SNVSSPATPTASSSSSTTPTRK	22	1	A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	SNVSSPATPTASSSS(0.003)S(0.332)T(0.332)T(0.332)PTRK	166.43	2.64e-18	42051000.0	2059.8	1648.4	2367.8	2089.2	1638.8	1402.2	1407.3	2024.6	2058.3	2284.0	True	False	1969.2536583348797	1920.7700819907534	1870.8311379015302	1906.0430796922547	1854.3309247702273	1673.1553049761892	1722.9228487446665	1953.393670445795	1962.6100822620704	1870.3454675874896	1.0528823110283305	1.026960053785307	1.000259668773741	1.0190861061356813	0.9914376551846761	0.8945701924972979	0.9211789365132743	1.0444026006411677	1.0493302527653303	1.0	10.869089056562599	-6.7669079683379385	1.0900408804906538	0.9816232208050685	1.057556305223145	0.17525114597220426	0.04603406814094938	1.6207454295292198	2.758750193072983	0.017650682655198015	0.11797638402578346	1.7103777240872216e-07	6.7669079683379385	0.07593308441807645	
SNVSSPATPTASSSSST(ph)TPTR	ddPTM_K562_Methotrexat_30min_R1	2	SNVSSPATPTASSSSSTTPTR	21	0	A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	SNVSSPATPT(0.011)AS(0.037)S(0.006)S(0.127)S(0.127)S(0.127)T(0.436)T(0.127)PT(0.001)R;SNVSSPATPTASSSS(0.001)S(0.018)T(0.491)T(0.491)PTR	194.15	1.9890000000000002e-21	26480000.0	6399.6	5804.3	8026.900000000001	7454.0	6134.0	6259.6	5228.3	6934.9	6309.799999999999	7739.299999999999	True	False	6118.281246664674	6763.361918769066	6342.163384078804	6800.519393081593	6940.728516317168	7469.179109277526	6400.87936480618	6690.995636261261	6016.4587752306315	6337.637774649669	0.9653882825455229	1.0671739470220716	1.0007140845832554	1.073036931880745	1.0951601784626823	1.1785430747011107	1.0099787322035783	1.055755452453438	0.9493219696613552	1.0	12.629729490035393	-9.748822771655352	24.125709347257068	0.9746610099026368	1.0587286558309508	0.24770997836248454	0.056308475910569075	180.9784010208667	346076.9059547785	0.03992496184004641	0.014844093012995519	1.783106274968329e-10	9.748822771655352	0.08406764592831395	
SNVSSPATPTASSSSST(ph)TPTRK	ddPTM_K562_Methotrexat_30min_R1	1	SNVSSPATPTASSSSSTTPTRK	22	1	A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	SNVSSPATPTAS(0.029)S(0.018)S(0.011)S(0.019)S(0.141)T(0.391)T(0.391)PT(0.002)RK	119.29	3.177e-06	19348000.0	1402.1	964.59	1984.3	1755.0	976.46	1285.0	976.26	1367.9	1473.0	1985.8	True	False	1340.4653628271362	1123.9721022733938	1567.822547063945	1601.1418748132805	1104.8816053216597	1533.3080636816453	1195.2111563387105	1319.7901816668991	1404.5205515095122	1626.1523772045684	0.8243171929136546	0.6911849824341518	0.9641301571991088	0.9846198285339766	0.6794453095601056	0.9429055266748576	0.7349933334004861	0.8116030208286383	0.8637078364845171	1.0	10.667246734902447	-10.131453780430284	4.59511500072278	0.9999905443600111	0.830138540761026	0.19787273552225426	0.10295223059499949	1.6813427110286734	56.698566880043614	0.0984642970813326	0.025721171514966404	7.388328887247371e-11	10.131453780430284	-0.1698520035989851	
SNVSSPATPTASSSSSTT(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	1	SNVSSPATPTASSSSSTTPTR	21	0	A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	SNVSSPATPTASSSSS(0.001)T(0.036)T(0.962)PT(0.001)R	222.13	1.4027e-41	10183000.0	1911.5	1869.7	1991.1	2227.8	1917.0	1564.7	1493.1	1645.5	1928.3	2154.7	True	False	1827.4727487654745	2178.6361455339184	1573.1953199914428	2032.4922328826367	2169.1191010401076	1867.0561301499372	1827.9656828399482	1587.6268323217216	1838.6537538871653	1764.4629505301064	1.0357104682852296	1.2347304571509308	0.8916000868812802	1.1519041713355358	1.2293367227622594	1.0581441393195636	1.0359898360522466	0.8997790697984013	1.0420472435166572	1.0	10.785013421978562	-8.811584059036457	2.8219573961395095	0.9782041289606261	1.1073778645407149	0.2293454320516365	0.0988258019922871	0.38129541332406236	6.17776041560132	0.04538176138190119	0.02974990590515231	1.5431777076118934e-09	8.811584059036457	0.1291737355800887	
SNVSSPATPTASSSSSTT(ph)PTRK	ddPTM_K562_Methotrexat_30min_R1	1	SNVSSPATPTASSSSSTTPTRK	22	1	A6NNK5;Q12888;Q12888-3;Q12888-2;H7BZY0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	SNVSSPATPT(0.119)AS(0.012)S(0.008)S(0.008)S(0.008)S(0.021)T(0.057)T(0.668)PT(0.098)RK	107.09	3.5374000000000004e-05	12545000.0	2749.4	2264.1	3571.0	2959.6	2061.2	1906.4	1837.4	2341.3	2752.2	3163.5	True	False	2628.5396680386048	2638.2040418801653	2821.4959006024033	2700.136463075433	2332.283928567483	2274.784819146061	2249.4837222223036	2258.9551519385273	2624.25082271859	2590.5594950582413	1.0146609923658632	1.0183916049458857	1.0891453780485245	1.042298572268354	0.9003012411089398	0.8781056074895972	0.8683389540033438	0.8719950868712788	1.0130054251695892	1.0	11.339048001714604	-7.758533558599286	24.953971746146987	0.9106839204771094	1.0429304997183027	0.5574248684460268	0.05142339934943568	50.98356060484142	437821.38899170625	0.0154811586949226	0.019111371653035364	1.7436786155447993e-08	7.758533558599286	0.1322465792411932	
SNVVSPT(ph)KNEDNGAPENSVEKPHEKPEAR	ddPTM_K562_Methotrexat_30min_R1	2	SNVVSPTKNEDNGAPENSVEKPHEKPEAR	29	3	X6RLN4;Q71RC2-2;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;Q71RC2-6	X6RLN4	LARP4	La-related protein 4	1	S(0.014)NVVS(0.128)PT(0.856)KNEDNGAPENS(0.003)VEKPHEKPEAR;S(0.003)NVVS(0.076)PT(0.92)KNEDNGAPENSVEKPHEKPEAR	65.118	0.00022158	26335000.0	6051.0	3565.6000000000004	13820.2	7223.1	3717.1000000000004	3227.8	2749.87	4557.6	4971.2	9122.5	True	False	5785.005285262824	4154.754795162724	10919.528884207586	6589.862037586218	4205.963803065299	3851.5266676666247	3366.598347244719	4397.306624727731	4740.0899970564105	7470.326851167631	0.7743978811795381	0.5561677391014458	1.4617203640160452	0.882138381476067	0.5630227280360425	0.5155767270162511	0.450662790841409	0.5886364428673454	0.6345224367680141	1.0	12.8669556516716	-7.717920677378471	5.904370469248262	0.5903782635418038	0.9354391939029013	0.23636336047318318	0.25372569393234745	0.25256218997826246	21.173425975738578	0.0768602595254408	0.09797497607519799	1.9146055902190928e-08	7.717920677378471	0.34506093036109753	
SPAAPGQS(ph)PTGSVCYER	ddPTM_K562_Methotrexat_30min_R1	4	SPAAPGQSPTGSVCYER	17	0	O75534;O75534-4	O75534	CSDE1	Cold shock domain-containing protein E1	1	S(0.013)PAAPGQS(0.978)PT(0.008)GSVCYER;SPAAPGQS(0.769)PT(0.229)GS(0.002)VCYER;SPAAPGQS(0.601)PT(0.302)GS(0.097)VCYER;SPAAPGQS(0.496)PT(0.496)GS(0.008)VCYER	217.67	2.2521999999999998e-30	92811000.0	5184.8099999999995	4477.129999999999	6114.5	6221.9	4757.599999999999	4515.58	4816.599999999999	5387.0	5292.6900000000005	6315.8	True	False	4956.891960516198	5216.899634301908	4831.1500095864985	5676.435687122938	5383.30779087554	5388.151927003554	5896.8451597126095	5197.536156619334	5046.633997127551	5171.947418646697	0.9584188622345332	1.0086915453728595	0.9341065595849828	1.0975431936251678	1.0408666900724501	1.0418033075079929	1.140159534192556	1.004947602112191	0.975770553840639	1.0	12.336491892516506	-7.255286945636065	24.976365463916306	1.0471270742209478	0.9712342457867593	0.3388050148414873	0.048272075763864344	585.7936252902754	2378073.2021732656	0.013438681521319369	0.02256163415351364	5.5553708333184845e-08	7.255286945636065	-0.07589282843418843	
SPAAPYFLGSSFS(ph)PVR	ddPTM_K562_Methotrexat_30min_R1	2	SPAAPYFLGSSFSPVR	16	0	P30291	P30291	WEE1	Wee1-like protein kinase	1	SPAAPYFLGS(0.009)S(0.178)FS(0.813)PVR;SPAAPYFLGS(0.014)S(0.184)FS(0.802)PVR	118.71	0.00052854	52352000.0	3013.0	2657.8	3554.0	2871.1	3221.8	2784.8999999999996	2919.6	3624.5	3841.7	3602.0	True	False	2880.5521276643317	3096.9562751243793	2808.063968283656	2619.3951206703205	3645.5231714820106	3323.042510931526	3574.394620333211	3497.0242806138444	3663.1002055221297	2949.642895906365	0.9765765651367763	1.0499427844036515	0.9520013328327988	0.8880380483704058	1.2359201775040012	1.1265914648662658	1.2118058851442328	1.1855754760914134	1.2418792154826368	1.0	11.526324587106032	-7.7655359330375795	24.999999877011177	1.1764644851921224	0.9715443012872144	0.6295359313724305	0.07503336210826608	64.22078014586404	391919.4106501845	0.022146002588757863	0.02602810084280575	1.7157897417320792e-08	7.7655359330375795	-0.20492018390490807	
SPAGPAATPAQAQAAST(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	SPAGPAATPAQAQAASTPR	19	0	Q13428;Q13428-3;Q13428-4;E7ETY2;Q13428-6;Q13428-7;Q13428-2;Q13428-8;A0A6I8PRA0;A0A3B3IS06	Q13428	TCOF1	Treacle protein	1	SPAGPAATPAQAQAAS(0.212)T(0.788)PR;SPAGPAATPAQAQAAS(0.331)T(0.669)PR;SPAGPAATPAQAQAAS(0.031)T(0.969)PR;SPAGPAATPAQAQAAS(0.24)T(0.76)PR	260.98	2.3978999999999996e-99	153397000.0	8234.5	7401.6	9532.2	7633.1	9427.199999999999	8859.5	7650.5	11403.900000000001	10977.5	10067.9	True	False	7872.5212397118985	8624.588594311306	7531.521485220446	6963.917974152281	10667.042039293316	10571.472988472786	9366.319373496099	11002.818373207949	10467.158421042548	8244.505750054326	0.9548809205039397	1.0461013498904377	0.9135200718576512	0.8446737967411077	1.2938364485006304	1.28224460130956	1.136068026083235	1.334563733324517	1.2695919850590893	1.0	13.009217292779828	-7.7665262870368394	24.995293335771574	1.2350895618556956	0.9455106921811832	0.6430840126256299	0.10160243455232383	75.12185565960147	369122.18322918785	0.030481759181627186	0.035622724435181656	1.7118815565618334e-08	7.7665262870368394	-0.2895788696745124	
SPAGSQQQFGY(ph)SPGQQQTHPQGSPR	ddPTM_K562_Methotrexat_30min_R1	1	SPAGSQQQFGYSPGQQQTHPQGSPR	25	0	Q8TAP9	Q8TAP9	MPLKIP	M-phase-specific PLK1-interacting protein	1	S(0.17)PAGS(0.065)QQQFGY(0.519)S(0.245)PGQQQTHPQGSPR	103.03	5.864e-07	9276400.0	768.15	502.96	1094.9	798.6	690.27	478.23	428.69	697.71	761.48	972.45	True	False	734.3830457568396	586.0655911417555	865.0954526938033	728.5879779064878	781.0526040036274	570.6411792174887	524.8346450851639	673.1711438342072	726.0789610071041	796.3298817668357	0.9222095799387143	0.7359583064262741	1.086353121365226	0.9149323598028906	0.9808153905648846	0.7165889316515334	0.6590668730409827	0.8453420614339207	0.9117816342595807	1.0	9.637222384614212	-8.251058793912724	24.940670596707232	0.8064217125589578	0.925447224368173	0.14057452256273484	0.12035567469356687	1232.997617833835	2962434.826655263	0.0406245940310918	0.04020641792290098	5.609720276278529e-09	8.251058793912724	0.11902551180921517	
SPAGSQQQFGYS(ph)PGQQQTHPQGSPR	ddPTM_K562_Methotrexat_30min_R1	1	SPAGSQQQFGYSPGQQQTHPQGSPR	25	0	Q8TAP9	Q8TAP9	MPLKIP	M-phase-specific PLK1-interacting protein	1	S(0.077)PAGS(0.014)QQQFGY(0.11)S(0.799)PGQQQTHPQGSPR	135.55	1.6014e-13	11719000.0	348.59	291.24	356.78	410.88	316.71	405.61	206.96	280.6	175.05	492.79	True	False	333.2664009898804	339.3624597664326	281.89675368718156	374.858788332354	358.3629162704288	483.9883919921495	253.37604830256237	270.73113895440605	166.91196370790243	403.5409557672673	0.8258552105479077	0.8409616295852554	0.6985579769746069	0.928923775827465	0.888045961999223	1.1993538328022357	0.6278818659702313	0.6708888777835572	0.4136183981389115	1.0	8.656571291242708														
SPAGSQQQFGYSPGQQQT(ph)HPQGSPR	ddPTM_K562_Methotrexat_30min_R1	1	SPAGSQQQFGYSPGQQQTHPQGSPR	25	0	Q8TAP9	Q8TAP9	MPLKIP	M-phase-specific PLK1-interacting protein	1	SPAGSQQQFGY(0.001)S(0.002)PGQQQT(0.63)HPQGS(0.367)PR	98.446	4.2406e-06	66605000.0	1556.9	1174.8	1590.0	1548.6	1546.2	1482.9	1293.3	2097.0	1775.0	2146.7	True	False	1488.4605401794224	1368.9157318143282	1256.280728635626	1412.836642356608	1749.5524016839915	1769.4494378470915	1583.3554467998836	2023.2473214090842	1692.4806374266022	1757.9118280516898	0.8467208175219444	0.778716946987899	0.7146437657387935	0.803701653183862	0.9952446839287935	1.0065632471499943	0.9007024251920139	1.1509378850084127	0.9627790258982412	1.0	10.779646995403558	-7.745230301715291	4.532131128623261	1.0068638136246253	0.777005305336951	0.7253623688394527	0.0654459058555959	0.10107829521636046	5.0023913772384985	0.020007806477623125	0.024856207189050242	1.7979172460192815e-08	7.745230301715291	-0.2298585082876743	
SPAGSQQQFGYSPGQQQTHPQGS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	SPAGSQQQFGYSPGQQQTHPQGSPR	25	0	Q8TAP9	Q8TAP9	MPLKIP	M-phase-specific PLK1-interacting protein	1	SPAGSQQQFGYSPGQQQT(0.261)HPQGS(0.739)PR	158.98	1.4568e-27	68827000.0	1381.2	1280.2	1884.6	1823.9	1437.5	1450.5	1516.2	1884.1	1758.2	1933.9	True	False	1320.4841018021832	1491.7312903206532	1489.0482145828291	1664.001518787433	1626.5564463980966	1730.7885963970632	1856.2464458656018	1817.8351350819544	1676.461665759692	1583.6519701258521	0.8338221570849591	0.9419565147272263	0.9402622815317782	1.050736872859253	1.0270921118286076	1.0929096979935042	1.1721302918077934	1.147875397734953	1.058604855981371	1.0	10.629039602313599	-6.954741645024903	0.784351123051022	1.1066364064696328	0.8142483199323579	0.7298768963359377	0.050491919175475436	0.5906231908047704	0.5197090667664772	0.02225712466916924	0.1285073278082551	1.1098348422622727e-07	6.954741645024903	-0.2923880865372749	
SPALKS(ph)PLQSVVVR	ddPTM_K562_Methotrexat_30min_R1	1	SPALKSPLQSVVVR	14	1	Q9Y2W1;A0A3B3ITZ9	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	1	S(0.005)PALKS(0.985)PLQS(0.01)VVVR	114.56	0.0035683	28372000.0	1393.9	896.81	1707.1	1597.5	872.1	981.59	817.64	968.72	1183.9	1322.3	True	False	1332.6258250087335	1044.9926093364043	1348.803038901809	1457.449655278756	986.7964361069777	1171.2683752756939	1001.0165835625589	934.6495685242772	1128.8607474080868	1082.8186566510226	1.2307008351059658	0.9650670524724722	1.24564074567521	1.3459775986741902	0.9113219744098005	1.0816847013868707	0.9244545034517009	0.863163524920223	1.0425205924133822	1.0	10.080575934758366	-7.780134618619437	24.99980871592574	0.9669369018397178	1.1837762220115404	0.5133614981356921	0.10761600126592528	213.44498347307567	285423.36567051185	0.03443718092954905	0.0391146770470445	1.65907256363236e-08	7.780134618619437	0.2168393201718226	
SPAVATSTAAPPPPSS(ph)PLPSK	ddPTM_K562_Methotrexat_30min_R1	5	SPAVATSTAAPPPPSSPLPSK	21	0	F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5	F8W726	UBAP2L	Ubiquitin-associated protein 2-like	1	SPAVATSTAAPPPPS(0.188)S(0.812)PLPSK;SPAVATSTAAPPPPS(0.275)S(0.719)PLPS(0.006)K;SPAVATSTAAPPPPS(0.215)S(0.785)PLPSK;SPAVATSTAAPPPPS(0.232)S(0.768)PLPSK;SPAVATSTAAPPPPS(0.215)S(0.779)PLPS(0.006)K	265.54	7.337599999999998e-123	527843000.0	22309.800000000003	16368.099999999999	29358.599999999995	22053.9	16292.3	15830.699999999999	15312.800000000001	19980.2	19332.300000000003	25359.1	True	False	21329.087905000248	19072.650314870705	23196.631069007453	20120.468827888664	18435.023020279463	18889.758726634256	18747.08519736895	19277.485041114833	18433.545592632283	20766.321255296796	1.0270999683952162	0.9184414552965614	1.117031311604638	0.9688990447817811	0.8877365804777436	0.9096343302411403	0.9027639015546479	0.9283052498380179	0.887665435105917	1.0	14.341958045572849	-7.527583944538102	11.846538344253606	0.9156890551902643	1.0160051805743628	0.41720104268894176	0.05374569113199852	0.20900245421637736	493.9596685446021	0.01503299113595578	0.019862050843117443	2.9676730681507438e-08	7.527583944538102	0.10031612538409851	
SPDEALPGGLSGCS(ph)SGSGHSPYALER	ddPTM_K562_Methotrexat_30min_R1	1	SPDEALPGGLSGCSSGSGHSPYALER	26	0	Q5JSZ5-5;Q5JSZ5;H0Y412;A0A494C065;A0A494C0D3	Q5JSZ5-5	PRRC2B	Protein PRRC2B	1	SPDEALPGGLS(0.08)GCS(0.483)S(0.335)GS(0.011)GHS(0.091)PY(0.002)ALER	102.21	2.5087e-07	28360000.0	2250.0	2038.9	2231.4	1925.7	1584.5	1686.5	1633.0	2544.6	2041.9	2145.1	True	False	2151.092694073929	2375.7935696256664	1763.059633885241	1756.8768708421278	1792.889523003676	2012.3922563417068	1999.2418190862218	2455.1049757069914	1946.972514682467	1756.6016035560085	1.2245763010345234	1.3524942507260527	1.0036764342672573	1.0001567044488415	1.0206580247759125	1.1456167706256695	1.1381304759366153	1.3976447310175255	1.108374551600703	1.0	10.77857131052898	-9.023817260195111	24.85843286840121	1.2053832866957876	1.1209278043629358	0.0	0.13853540997710256	2253.1696727277536	2351656.9793169512	0.06745900480946818	0.039264089022189405	9.46635397092152e-10	9.023817260195111	-0.08445548233285183	
SPDKPGGS(ph)PSASR	ddPTM_K562_Methotrexat_30min_R1	3	SPDKPGGSPSASR	13	1	Q9Y3T9	Q9Y3T9	NOC2L	Nucleolar complex protein 2 homolog	1	SPDKPGGS(0.974)PS(0.025)AS(0.001)R;SPDKPGGS(0.493)PS(0.493)AS(0.013)R;SPDKPGGS(0.993)PS(0.005)AS(0.002)R	115.58	0.0034082	21944300.0	6644.700000000001	5044.1	9716.3	7789.3	5502.7	4727.1	4228.900000000001	5981.6	6770.6	8421.7	True	False	6352.606944139133	5877.551789959695	7676.981411095805	7106.424162668429	6226.401500935521	5640.545173408175	5177.338474423593	5771.223737596846	6455.836283808766	6896.448522058477	0.9211417911436804	0.8522577629862946	1.113178962554534	1.0304469235053868	0.9028417280314944	0.81789128931605	0.7507253128713621	0.8368399646770989	0.936110269388599	1.0	12.751637890224112	-7.9694673526266016	5.632889225641943	0.8514816370612568	0.9791969421842234	0.24399747289893436	0.08990139823181914	0.23683483371519695	21.130305821537625	0.029792537496275986	0.03329139986363784	1.0728342933578208e-08	7.9694673526266016	0.12771530512296658	
SPDT(ph)VCLSR	ddPTM_K562_Methotrexat_30min_R1	1	SPDTVCLSR	9	0	Q9UBU7;B4DXK0;Q9UBU7-2	Q9UBU7	DBF4	Protein DBF4 homolog A	1	S(0.382)PDT(0.618)VCLSR	93.178	0.028183999999999997	8071000.0	3097.9	3986.4	6148.7	4640.3	3543.5	3844.9	3817.5	2797.1	2488.7	2974.0	True	False	2961.7200253207243	4645.084842785694	4858.171896957149	4233.492103530522	4009.5323602168082	4587.872508987981	4673.671551966716	2698.724407588627	2373.0008802048374	2435.379781350785	1.2161224495663687	1.9073348963295138	1.9948313335600418	1.7383293299669316	1.6463684189711547	1.883842735379578	1.9190729872013887	1.1081328785984164	0.9743863763575514	1.0	11.249931053252174	-9.32547949134676	5.48335321181563	1.0136796360041103	1.772313672505397	0.7207226407947586	0.2085464012878707	0.11674701658096358	7.028117319917714	0.11742798954276502	0.05531892063369464	4.726291552997899e-10	9.32547949134676	0.7586340365012867	
SPEEEGQMS(ph)S	ddPTM_K562_Methotrexat_30min_R1	1	SPEEEGQMSS	10	0	Q9BRL6-2;Q9BRL6	Q9BRL6-2	SRSF8	Serine/arginine-rich splicing factor 8	1	SPEEEGQMS(0.594)S(0.406)	86.344	0.01596	2870900.0	1936.0	1915.7	2199.9	1889.3	2014.2	2169.8	1655.0	2512.8	2645.3	2575.9	True	False	1850.8957581009458	2232.2368636676106	1738.1710534122726	1723.6680023274826	2279.1026047548153	2589.083141304616	2026.1758791106517	2424.4233997314004	2522.3205803856845	2109.379549018657	0.8774598004242692	1.0582433420794803	0.82402005567036	0.8171445499836109	1.0804611269769435	1.2274145459071748	0.960555382293948	1.1493537997271808	1.1957642149129297	1.0	11.042602992985016	-7.8597004052159525	6.521813564261588	1.1113981856059822	0.9016386069639444	0.5202069729417647	0.09785188020994237	0.17822723796351275	10.094987246269032	0.0306837693276049	0.03497425179796068	1.3813368408384223e-08	7.8597004052159525	-0.20975957864203787	
SPFEIIS(ph)PPAS(ph)PPEMVGQR	ddPTM_K562_Methotrexat_30min_R1	2	SPFEIISPPASPPEMVGQR	19	0	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	2	SPFEIIS(1)PPAS(1)PPEMVGQR;S(0.004)PFEIIS(0.996)PPAS(1)PPEMVGQR	71.697	0.012381	11680000.0	2951.7	2221.6800000000003	3639.1000000000004	3165.5	3178.05	2679.94	2727.8	3103.4300000000003	3262.5	3440.5	True	False	2821.9468022657857	2588.774857896881	2875.3026412439644	2887.985529755807	3596.0192796351134	3197.800476406996	3339.578587938392	2994.28060785913	3110.8270871010072	2817.3921108733593	1.001616633827733	0.9188550105985746	1.0205546576733522	1.0250562989120333	1.2763645023909678	1.1350214491144133	1.1853439125671297	1.0627844794138142	1.104151273475628	1.0	11.46014464959794	-7.539463605107654	24.78871256139637	1.1352531006107	0.9822953774678055	0.4620037251756932	0.07266069113993852	178.98713184072903	267523.0973432846	0.021330791794624975	0.02754533956201817	2.887595756321088e-08	7.539463605107654	-0.15295772314289457	
SPGCRPLPSAGSPT(ph)PTTHEIVTVGDPLLSSGLR	ddPTM_K562_Methotrexat_30min_R1	1	SPGCRPLPSAGSPTPTTHEIVTVGDPLLSSGLR	33	1	Q03164-2;Q03164;Q03164-3	Q03164-2	KMT2A	Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180	1	S(0.006)PGCRPLPS(0.037)AGS(0.279)PT(0.373)PT(0.152)T(0.152)HEIVTVGDPLLSSGLR	63.128	0.0003074	52874000.0	866.27	925.76	1066.8	1027.9	1085.8	761.44	701.68	1232.7	1234.2	1186.7	True	False	828.1898080424106	1078.7261047705415	842.8932586845818	937.7856029177052	1228.601731825429	908.5775035095351	859.0496017246909	1189.3452422989888	1176.8223113869933	971.7771306418886	0.8522425378495642	1.110055043236107	0.867373013941813	0.9650212722111181	1.2642834381314365	0.9349648956128365	0.8839985781073715	1.2238868407135592	1.211000212167646	1.0	9.924481670904795	-6.8181296597269245	0.40568912755451714	1.1039012318692227	0.8506249246516953	0.1453916237618913	0.13871371398156584	8.116635399000655	1.466815157866017	0.12660962667317113	0.9579486796584158	1.520093634142656e-07	6.8181296597269245	-0.2532763072175275	
SPGCRPLPSAGSPTPT(ph)THEIVTVGDPLLSSGLR	ddPTM_K562_Methotrexat_30min_R1	1	SPGCRPLPSAGSPTPTTHEIVTVGDPLLSSGLR	33	1	Q03164-2;Q03164;Q03164-3	Q03164-2	KMT2A	Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180	1	S(0.001)PGCRPLPS(0.02)AGS(0.049)PT(0.161)PT(0.552)T(0.218)HEIVTVGDPLLSSGLR	71.78	7.024400000000001e-06	52950000.0	1336.2	972.57	1318.4	1199.7	984.22	1061.7	1123.1	1014.7	1238.9	1361.9	True	False	1277.4622479207044	1133.2706616365854	1041.6858570020186	1094.5241636544122	1113.6621813383906	1266.858498996733	1374.9837642472353	979.0124258625651	1181.3038094128553	1115.2467129191773	1.1454526008661574	1.016161400440473	0.9340407328127317	0.9814188654181069	0.9985792098174948	1.1359446159502316	1.2328964957432529	0.8778438120655684	1.059230926868883	1.0	10.123147180577035	-6.257986995553683	23.437529191475083	1.0271584951508232	1.1454527045362126	0.12446763831058816	0.09482847089861028	328.288252037316	2228426.9299909743	0.02482390435288488	0.17160680915451829	5.520939708491116e-07	6.257986995553683	0.11829420938538937	
SPGS(ph)PVGEGTGSPPK	ddPTM_K562_Methotrexat_30min_R1	2	SPGSPVGEGTGSPPK	15	0	E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;P35611;P35611-3;A0A0A0MSR2;H0Y9H2	E7EV99	ADD1	Alpha-adducin	1	S(0.195)PGS(0.805)PVGEGTGSPPK;SPGS(0.529)PVGEGT(0.279)GS(0.192)PPK	122.75	0.00059005	148919000.0	3687.0	2540.2	4900.5	3501.7	2844.2	2186.8	2485.0	3586.7	3555.5	4426.7	True	False	3524.923894689146	2959.924873982598	3871.952019294894	3194.711397739979	3218.2621529359776	2609.3681507074107	3042.3245073051194	3460.5537280390868	3390.2055810536804	3624.981734399972	0.9723976982390539	0.8165351140652138	1.0681300770570095	0.8813041366314046	0.8878009294214231	0.7198293238129456	0.8392661619324552	0.9546403214116878	0.9352338382512835	1.0	11.82375801033946	-9.344931875557117	7.91008614879293	0.9594908492415445	0.8819572977114276	0.14626077684418815	0.08803856894229499	0.7066344674488011	60.25957839365489	0.05083739059337888	0.024258741779496367	4.5192682910909453e-10	9.344931875557117	-0.07753355153011687	
SPGS(ph)TPT(ph)TPTSSQAPQK	ddPTM_K562_Methotrexat_30min_R1	1	SPGSTPTTPTSSQAPQK	17	0	A0A494C1F2;P35658-2;P35658-4;P35658;P35658-3;P35658-5	A0A494C1F2	NUP214	Nuclear pore complex protein Nup214	2	S(0.016)PGS(0.862)T(0.122)PT(0.877)T(0.039)PT(0.073)S(0.009)S(0.001)QAPQK	165.02	3.6821999999999994e-07	33735000.0	6507.6	4398.8	7638.1	6077.4	4461.7	3889.0	3946.2	5866.0	5915.1	7275.2	True	False	6221.533695980224	5125.626933184255	6034.967190812436	5544.603777772215	5048.491754361318	4640.494209850519	4831.23580310964	5659.689455119548	5640.108292080056	5957.590781870619	1.0443036327558453	0.860352300259009	1.0129878690522482	0.930678856735989	0.8474049224267375	0.7789212753537688	0.810937840479316	0.9499963428744373	0.946709584223763	1.0	12.540513315056932	-3.0000000000267906	0.7666163825967839	0.8887259796863666	27.859372840127115	0.19621078086531285	0.0765059834673089	715.1081214715019	2.866005940750518	0.029816999907100575	33375.77676129173	0.0009999999999383124	3.0000000000267906	26.97064686044075	
SPGS(ph)TPTT(ph)PTSSQAPQK	ddPTM_K562_Methotrexat_30min_R1	1	SPGSTPTTPTSSQAPQK	17	0	A0A494C1F2;P35658-2;P35658-4;P35658;P35658-3;P35658-5	A0A494C1F2	NUP214	Nuclear pore complex protein Nup214	2	S(0.168)PGS(0.658)T(0.18)PT(0.226)T(0.636)PT(0.058)S(0.058)S(0.016)QAPQK	104.26	0.014563	22563000.0	2813.0	1809.5	3674.8	2369.4	2157.1	1699.9	1742.8	2474.0	2648.7	2959.8	True	False	2689.3438881910947	2108.489118758961	2903.50969911333	2161.678380730819	2440.796459495887	2028.3816166944976	2133.667264117249	2386.9880177234522	2525.5625151277995	2423.751538951597	1.1095790327396267	0.8699279133499781	1.197940322038642	0.8918729275633017	1.007032453727358	0.8368768762378515	0.8803160017961968	0.9848319761174666	1.0420055333808025	1.0	11.243026099028041	-6.230097092724122	22.777970032158972	0.9666025891976749	1.1095798491007636	0.15106438140758993	0.1007420861110325	7429.225778454559	5398886.588975647	0.02482868154245623	2.670205526491723	5.887120256743877e-07	6.230097092724122	0.14297725990308863	
SPGS(ph)TPTTPT(ph)SSQAPQK	ddPTM_K562_Methotrexat_30min_R1	1	SPGSTPTTPTSSQAPQK	17	0	A0A494C1F2;P35658-2;P35658-4;P35658;P35658-3;P35658-5	A0A494C1F2	NUP214	Nuclear pore complex protein Nup214	2	S(0.34)PGS(0.649)T(0.01)PTT(0.04)PT(0.74)S(0.19)S(0.03)QAPQK	144.41	1.838e-08	34896000.0	2686.7	1818.9	3873.0	2644.0	1442.0	1747.1	1744.8	2481.8	2756.3	2573.5	True	False	2568.5958849637445	2119.44230898628	3060.1102276765896	2412.204625074825	1631.6482752737782	2084.702348683425	2136.115815028561	2394.5136873023703	2628.1602146134887	2107.414212275131	1.218837696928469	1.0057075142803387	1.4520687057400752	1.1446276726351992	0.7742418485031837	0.989222876329003	1.0136193457300662	1.136233054401437	1.2471018745651188	1.0	11.041258188406289	-7.531125712629326	24.995023388219195	1.0245091681350273	1.2193538316355683	0.26418883215638456	0.15047561559352324	269.0530074196038	815445.4294606408	0.046255557467674464	0.05981847784519943	2.94356945300135e-08	7.531125712629326	0.19484466350054097	
SPGSNS(ph)KVPEIEVTVEGPNNNNPQTSAVR	ddPTM_K562_Methotrexat_30min_R1	2	SPGSNSKVPEIEVTVEGPNNNNPQTSAVR	29	1	A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347	A0A494C1K3	GTF2I	General transcription factor II-I	1	S(0.09)PGS(0.353)NS(0.556)KVPEIEVT(0.001)VEGPNNNNPQTSAVR;S(0.032)PGS(0.422)NS(0.544)KVPEIEVT(0.001)VEGPNNNNPQTSAVR	76.818	8.2754e-05	241629000.0	1230.15	1182.01	2427.3999999999996	1807.6399999999999	1034.34	1270.24	1151.43	1291.29	1458.78	2045.1999999999998	True	False	1176.0740789400206	1377.3170617652813	1917.9219123837215	1649.1670077421538	1170.3738398381963	1515.6959025766328	1409.6674879059694	1245.8745987898608	1390.9616362057343	1674.7944616067994	0.7022199475222136	0.8223797566442166	1.1451685304378576	0.9846981498612919	0.6988164020529054	0.9050041287588644	0.8416958141559252	0.7438970138428613	0.83052677095149	1.0	10.709768336999336	-7.73105184111092	24.99965866688598	0.8275206629966015	0.9236390695696389	0.07198999604200229	0.13099769067906242	506.26990513217436	416503.49253652146	0.04025153458942464	0.05195806635481784	1.85758270486729e-08	7.73105184111092	0.09611840657303738	
SPGSTPT(ph)TPTSSQAPQK	ddPTM_K562_Methotrexat_30min_R1	1	SPGSTPTTPTSSQAPQK	17	0	A0A494C1F2;P35658-2;P35658-4;P35658;P35658-3;P35658-5	A0A494C1F2	NUP214	Nuclear pore complex protein Nup214	1	SPGSTPT(0.633)T(0.367)PTSSQAPQK	234.63	4.2198999999999997e-51	10222000.0	3433.3	2210.7	4949.2	3217.4	2774.5	2433.8	2105.8	3016.8	2883.2	3737.9	True	False	3282.3762429173435	2575.9805995249694	3910.430554819771	2935.3355373357554	3139.3953812393183	2904.097404971509	2578.0792545203703	2910.6974340614834	2749.1606613117633	3060.9300890084382	1.0723460345285576	0.8415679302102048	1.2775301758317914	0.9589685004163658	1.025634460751862	0.9487630623776404	0.8422535567793764	0.9509192792457336	0.898145524846773	1.0	11.579754379055696	-8.294599537108887	2.890499013962095	0.9161961997222654	1.036185130260637	0.19775585690466113	0.10845134870995574	0.43999120445234574	7.3652483180564285	0.03960055421761423	0.035948551228902725	5.074584199529782e-09	8.294599537108887	0.11998893053837167	
SPGSTPTT(ph)PTSSQAPQK	ddPTM_K562_Methotrexat_30min_R1	1	SPGSTPTTPTSSQAPQK	17	0	A0A494C1F2;P35658-2;P35658-4;P35658;P35658-3;P35658-5	A0A494C1F2	NUP214	Nuclear pore complex protein Nup214	1	SPGSTPT(0.001)T(0.991)PT(0.006)S(0.002)S(0.001)QAPQK	210.02	5.3530999999999995e-22	14085000.0	2400.1	1975.2	3616.1	2019.5	1663.3	1635.3	1769.1	2390.2	2142.6	2638.1	True	False	2294.5944777985956	2301.568227340536	2857.1300269303683	1842.4535704760224	1882.0531042044918	1951.2985809638876	2165.865708601001	2306.135311221742	2042.9909936621054	2160.3145262883345	1.0621575932005463	1.0653857108922429	1.3225528006050313	0.8528635752135438	0.8711940235101194	0.9032474471744816	1.0025696176390593	1.0674997937378796	0.945691457795359	1.0	11.077025658385232	-7.277885043182046	24.999758163138203	0.9489045279102772	1.1415674257577484	0.5086153433706497	0.09043147840695867	702.5512571005929	1067976.4667355255	0.02702790499267829	0.040226514305874726	5.273694365082206e-08	7.277885043182046	0.19266289784747115	
SPHQLLSPSSFS(ph)PSATPSQK	ddPTM_K562_Methotrexat_30min_R1	1	SPHQLLSPSSFSPSATPSQK	20	0	E9PIQ6;A0A3B3ITS5;Q14181	E9PIQ6	POLA2	DNA polymerase alpha subunit B	1	SPHQLLSPSSFS(0.997)PS(0.003)ATPSQK	167.98	7.2445e-13	19665000.0	2818.6	1956.0	4427.8	2995.8	2313.7	2275.7	2246.0	2823.2	2834.9	3738.7	True	False	2694.6977188963465	2279.1957536847326	3498.465289467183	2733.1628652795616	2617.992104369584	2715.4468175255392	2749.7226734033397	2723.9064557950064	2703.106117769395	3061.58520125628	0.880164209635784	0.7444495592510362	1.142697347776451	0.8927280103647108	0.8551099944222772	0.8869414499427593	0.8981369103414232	0.8897046061880911	0.8829106296503563	1.0	11.580063117262132	-12.559006923732987	6.358300382277762	1.0001603604711216	0.8978910597354564	0.09983084442218138	0.0927668670820907	0.00020966150189527053	1.4541486560271152e-05	0.08930257788540967	0.021625212568284275	2.7605338461018537e-13	12.559006923732987	-0.1022693007356652	
SPIS(ph)PELHSAPLTPVAR	ddPTM_K562_Methotrexat_30min_R1	1	SPISPELHSAPLTPVAR	17	0	A0A3B3IT55;A0A0G2JNT7;Q7Z3B3-4;Q7Z3B3-2;Q7Z3B3;A0A1W2PRB5;A0A0J9YVS1;A0A0G2JNB1;A0A0G2JQF4;A0A0G2JQF5	A0A3B3IT55	KANSL1	KAT8 regulatory NSL complex subunit 1	1	S(0.01)PIS(0.99)PELHSAPLTPVAR	83.167	0.0090765	8131100.0	950.64	1016.9	1137.6	1050.7	1118.1	844.97	771.97	978.74	991.03	1020.1	True	False	908.851003864196	1184.9254406554217	898.8333062238285	958.5867623169877	1265.1497479775396	1008.2484938280775	945.1039235027497	944.3171594448866	944.9572316106396	835.3500050288957	1.0879882664665308	1.4184778039409167	1.075996050533018	1.1475270922920855	1.5145145631905237	1.2069773002433883	1.1313867454517552	1.1304449078350356	1.13121114014712	1.0	9.706236991815983	-9.575854973773847	0.9385764208807699	1.0207652452710159	1.2452179665237022	0.2336833317224145	0.13254013692696023	0.8029999298955167	1.3731832986486094	0.12493779277245766	0.046445348125400465	2.655492176312609e-10	9.575854973773847	0.22445272125268634	
SPKTGGRAPPGGAEAGEPT(ph)T(ph)LLQR	ddPTM_K562_Methotrexat_30min_R1	1	SPKTGGRAPPGGAEAGEPTTLLQR	24	2	F8WDU3;F8WFE4;F2Z2G0;F6S3S0;A0A0A0MT34;A0A0A0MSM9;F6X9D6;F6R6G4;F6UE82;A0A0A0MSQ2;F8W689;P48382-2;P48382	F8WDU3	RFX5	DNA-binding protein RFX5	2	S(0.001)PKT(0.001)GGRAPPGGAEAGEPT(0.999)T(0.999)LLQR	44.5	0.0304	0.0	2000.1	1445.8	1822.6	1629.3	1476.3	1491.9	1206.9	1631.0	1738.5	1745.0	True	False	1912.1779988521187	1684.6938756019372	1440.0611673026983	1486.46179865144	1670.459326481746	1780.1885604720976	1477.5780474312073	1573.6368055403987	1657.6775144598018	1428.9635906042765	1.338157257067342	1.1789620720073897	1.0077661717704989	1.0402376998442968	1.1690006221749474	1.245790006251521	1.0340207806179111	1.1012434577671382	1.1600558092308058	1.0	10.48075344229677														
SPLELGEKLS(ph)PLPGGPGAGDPR	ddPTM_K562_Methotrexat_30min_R1	2	SPLELGEKLSPLPGGPGAGDPR	22	1	Q15742-2;Q15742-3;Q15742	Q15742-2	NAB2	NGFI-A-binding protein 2	1	S(0.004)PLELGEKLS(0.996)PLPGGPGAGDPR;SPLELGEKLS(1)PLPGGPGAGDPR	81.15100000000001	0.0013253	39400000.0	4545.4	2970.6000000000004	5530.2	4334.9	3413.3	2913.8	2979.5	4360.0	3777.2	5004.5	True	False	4345.589658508284	3461.441158433472	4369.486594654549	3954.8660473664354	3862.2087780804354	3476.850611638583	3647.7287201270037	4206.656328728474	3601.598796443808	4098.1365554034965	1.0603818588666876	0.8446378278609273	1.0662130301376294	0.9650400844139381	0.9424304744037911	0.8483979400477194	0.8900944785056958	1.0264802726453544	0.8788381616261687	1.0	12.000752342344851	-6.217641232238134	22.546407015050384	0.9414079182244144	1.0603833293951148	0.20169823849922874	0.07167254103248412	14145.75785082941	7281377.047775054	0.01758796026233846	6.4580988633480185	6.058411494032751e-07	6.217641232238134	0.11897541117070043	
SPLGEAPPGT(ph)PPCR	ddPTM_K562_Methotrexat_30min_R1	3	SPLGEAPPGTPPCR	14	0	M0QXZ5;Q96B54	M0QXZ5	ZNF428	Zinc finger protein 428	1	SPLGEAPPGT(1)PPCR;SPLGEAPPGT(1)PPCR;SPLGEAPPGT(1)PPCR	162.64	2.4232e-21	80959000.0	3037.5	2623.11	3821.3	3328.27	2814.67	2593.44	2899.5099999999998	2982.0800000000004	3109.8	3209.01	True	False	2903.975136999805	3056.5343422535598	3019.2613511542863	3036.4857365725343	3184.8484403362304	3094.585575622199	3549.798926429079	2877.1985561409656	2965.226076771408	2627.827193057322	1.1050860363543165	1.1631413018058705	1.1489573435921232	1.1555119547414996	1.2119702729123703	1.1776214142992527	1.3508494530415058	1.0948964086156345	1.1283946237429494	1.0	11.359654691252185	-10.038642822488931	1.761954885129939	1.0036159978053303	1.1829632545699726	0.4005295708476524	0.06616851955574776	0.4084810527536617	2.857840718342249	0.06418974003541893	0.018333348774646673	9.1486534633249e-11	10.038642822488931	0.17934725676464236	
SPLLAGGS(ph)PPQPVVPAHK	ddPTM_K562_Methotrexat_30min_R1	2	SPLLAGGSPPQPVVPAHK	18	0	C9IYQ7;C9JIY9;F8WCF5;F8WEL4;Q8NFH5;Q8NFH5-2	C9IYQ7;Q8NFH5	NUP35	Nucleoporin NUP53	1	S(0.001)PLLAGGS(0.999)PPQPVVPAHK;S(0.044)PLLAGGS(0.956)PPQPVVPAHK	119.18	0.00016232	63525000.0	8665.3	6542.2	12333.4	8961.1	7394.700000000001	6507.0	5987.799999999999	8003.8	8960.400000000001	10832.099999999999	True	False	8284.383787537254	7623.18735161363	9744.787885883416	8175.494276005293	8367.232663777402	7764.385657880513	7330.716573376902	7722.3018174029785	8543.832959773143	8870.301724804918	0.9339461096763819	0.8594056423465443	1.0985858416329948	0.9216703703712056	0.9432861387769107	0.875323737429154	0.8264337336888192	0.8705793846683172	0.9631953032534578	1.0	13.114767463537506	-8.089631715858667	3.542334774423858	0.8942550739791336	0.9553721608555411	0.07106050002555186	0.07270813705856273	0.5372018614776032	12.672634044854007	0.02504960440859472	0.02565524548953874	8.13520093313686e-09	8.089631715858667	0.06111708687640749	
SPLLAGGS(ph)PPQPVVPAHKDK	ddPTM_K562_Methotrexat_30min_R1	1	SPLLAGGSPPQPVVPAHKDK	20	1	C9IYQ7;C9JIY9;F8WCF5;F8WEL4;Q8NFH5;Q8NFH5-2	C9IYQ7;Q8NFH5	NUP35	Nucleoporin NUP53	1	S(0.005)PLLAGGS(0.995)PPQPVVPAHKDK	115.96	6.9223e-05	12191000.0	1322.8	648.29	1789.1	1521.9	802.25	723.0	651.09	901.04	1175.3	1405.2	True	False	1264.651295875997	755.4089034541287	1413.592359498112	1388.4773899021845	907.759936781129	862.7095175422793	797.1135064230546	869.3499124856666	1120.660559530978	1150.7046633335979	1.0990233516672254	0.6564750517875758	1.2284580088542676	1.2066322785898493	0.7888730842120196	0.7497227959805125	0.6927177162155685	0.7554935164398786	0.9738906908436592	1.0	10.168301887534763	-7.7913084287841805	24.9351311450196	0.8040012505285083	1.032621412780166	0.27389593904561294	0.17312339085011924	266.21240039394627	222236.56269686882	0.05521331965238165	0.06261441798762774	1.616931311816508e-08	7.7913084287841805	0.2286201622516577	
SPLLS(ph)AS(ph)HSGNVTPTAPPYLQESSPR	ddPTM_K562_Methotrexat_30min_R1	1	SPLLSASHSGNVTPTAPPYLQESSPR	26	0	E5RJC2;E5RIP9;E5RIY0;E5RFT4;Q8N4L2	E5RJC2	TMEM55A	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase	2	S(0.076)PLLS(0.465)AS(0.671)HS(0.602)GNVT(0.171)PT(0.014)APPYLQESSPR	68.303	0.0032378	25126000.0	865.73	858.97	1088.5	1041.6	869.18	779.76	879.06	1021.2	992.02	1036.4	True	False	827.6735457958323	1000.9001925064287	860.038725232628	950.2845451883267	983.4924049254246	930.4375842306614	1076.2115820489491	985.2838171783294	945.9012067267255	848.697917078666	0.9752274974879136	1.1793362188888876	1.013362596897844	1.1196970395065133	1.1588250485057623	1.0963118507859126	1.26807378737704	1.1609358257527138	1.1145322589958113	1.0	9.729107326492487	-7.4916135641640205	9.58214209441148	1.145475170494458	1.0679407829625653	0.143183352301261	0.07998054497805245	0.8495252301894947	252.79089149386985	0.02170841653883204	0.03161511745415841	3.223936178301655e-08	7.4916135641640205	-0.07753438753189257	
SPLLSASHS(ph)GNVT(ph)PTAPPYLQESSPR	ddPTM_K562_Methotrexat_30min_R1	1	SPLLSASHSGNVTPTAPPYLQESSPR	26	0	E5RJC2;E5RIP9;E5RIY0;E5RFT4;Q8N4L2	E5RJC2	TMEM55A	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase	2	SPLLS(0.002)AS(0.038)HS(0.96)GNVT(0.872)PT(0.127)APPYLQESSPR	122.06	4.6025000000000004e-10	17192000.0	712.54	707.83	746.03	693.88	621.5	604.65	523.0	729.43	563.81	756.0	True	False	681.217594771306	824.7868764471705	589.4484981031673	633.0486177181995	703.2381436079423	721.4900550234296	640.2960633080797	703.7755334551401	537.5985961619676	619.0810742102192	1.100368955132987	1.3322760310503379	0.9521345792312338	1.022561735594646	1.135938688652508	1.1654209522458052	1.0342685150324216	1.1368067330324518	0.8683815715862397	1.0	9.273984545420827	-3.0000000000000018	0.13037526167181812	0.948255208128641	1.7012329333292118	0.17787101907601222	0.1111841456585249	150.97872334908027	1.3341583965267756	0.5977115281720734	20.90950536184874	0.000999999999999996	3.0000000000000018	0.7529777252005708	
SPLLSASHS(ph)GNVTPTAPPYLQESSPR	ddPTM_K562_Methotrexat_30min_R1	2	SPLLSASHSGNVTPTAPPYLQESSPR	26	0	E5RJC2;E5RIP9;E5RIY0;E5RFT4;Q8N4L2	E5RJC2	TMEM55A	Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase	1	S(0.003)PLLS(0.044)AS(0.034)HS(0.919)GNVTPTAPPYLQESSPR;S(0.002)PLLS(0.02)AS(0.069)HS(0.909)GNVTPTAPPYLQESSPR	134.8	1.584e-13	41296000.0	2135.42	1789.27	2430.06	2210.4	2217.73	1901.35	2261.91	2649.38	2803.75	2728.42	True	False	2041.5494936797104	2084.916455110165	1920.0236147347719	2016.6176638673933	2509.400367214229	2268.7589781175852	2769.200895902826	2556.199803717122	2673.404274470331	2234.27669906964	0.9137406725540387	0.9331505162177678	0.8593490750426194	0.9025818801704907	1.1231376884784017	1.0154333073707047	1.2394171666633456	1.1440838123503376	1.1965412679564467	1.0	11.125592148932741	-7.763436911907046	7.313365286519054	1.128172111576141	0.9008138095937173	0.6962664265648488	0.07026975527733864	0.07066222398851935	22.626262788094373	0.021348501997910763	0.025768692899952365	1.7241025258011156e-08	7.763436911907046	-0.22735830198242368	
SPMGAMNVGKLS(ph)TR	ddPTM_K562_Methotrexat_30min_R1	1	SPMGAMNVGKLSTR	14	1	A0A0A0MTM4	A0A0A0MTM4	ZNF793		1	SPMGAMNVGKLS(0.5)T(0.5)R	101.45	0.0051673000000000005	50438000.0	2361.5	2090.7	2001.9	2131.7	2212.4	1957.7	2032.6	2292.6	2404.4	2613.2	True	False	2257.691287580261	2436.1526391762136	1581.7285475821757	1944.8171706777603	2503.3693787903653	2335.997818108605	2488.4622911663537	2211.9679585419494	2292.6199688048014	2139.924157574267	1.0550333195637596	1.1384294301054758	0.7391516853453163	0.9088252795287509	1.1698402347249939	1.091626453134021	1.1628740590447726	1.0336665207094762	1.071355711691962	1.0	11.063343950713538	-7.754324622107563	24.99897445101617	1.0938128008308552	0.9572785834223798	0.25204907755619965	0.10759919438887615	241.66503550072343	849128.7585866551	0.03386180817151675	0.042774992930605396	1.7606595142263498e-08	7.754324622107563	-0.13653421740847538	
SPPASSAASADQHSQSGS(ph)SSDNTER	ddPTM_K562_Methotrexat_30min_R1	1	SPPASSAASADQHSQSGSSSDNTER	25	0	Q8IY57-3;Q8IY57;Q8IY57-5	Q8IY57-3	YAF2	YY1-associated factor 2	1	SPPASSAASADQHS(0.002)QS(0.139)GS(0.385)S(0.385)S(0.086)DNT(0.003)ER	127.25	8.953600000000001e-11	1920600.0	535.04	510.11	969.05	824.59	457.75	509.96	411.19	537.75	883.85	949.13	True	False	511.52028223880683	594.3970071125354	765.6596478517944	752.2994749585657	517.9521484095507	608.5025526498771	503.4098246111841	518.8370277003987	842.7600064166213	777.233359742256	0.658129602682566	0.7647600294841279	0.9851090901524098	0.9679196930096274	0.6664049373553813	0.782908434156335	0.6476945672765815	0.6675434362112996	1.084307558152284	1.0	9.602204014143492	-9.770029930097683	24.996046532652638	1.042153939864392	0.7745402013781754	0.46521466813482004	0.11757436358745593	204.58251834611752	595253.7472053795	0.11727733735269003	0.03219890307513223	1.6981266193215607e-10	9.770029930097683	-0.2676137384862166	
SPPLS(ph)PVGTTPVK	ddPTM_K562_Methotrexat_30min_R1	1	SPPLSPVGTTPVK	13	0	C9J4K0;Q9BVC5-2;Q9BVC5	C9J4K0	C2orf49	Ashwin	1	SPPLS(0.757)PVGT(0.187)T(0.056)PVK	124.81	0.00084382	7930400.0	2042.2	1581.3	2697.1	1790.1	1494.9	1360.6	1382.3	1795.9	1974.5	2206.6	True	False	1952.4273332612352	1842.5829474957409	2131.015568052294	1633.164712309547	1691.5055525012297	1623.5166937317092	1692.315962353267	1732.737179074189	1882.7059259711689	1806.963357608824	1.0805018956471288	1.0197124029864406	1.1793352416798821	0.9038172829750866	0.9361039588205148	0.898477928119211	0.9365524515077764	0.9589221451436296	1.0419170472070756	1.0	10.819351535561871	-7.274404069100119	24.99890704257446	0.9482262033219302	1.0858361071901261	0.5789893340668422	0.05426423231744327	528.7130276037387	1019478.9872961267	0.01533360938146233	0.02289998410968652	5.3161341412571016e-08	7.274404069100119	0.13760990386819594	
SPPREGS(ph)QGELTPANSQSR	ddPTM_K562_Methotrexat_30min_R1	4	SPPREGSQGELTPANSQSR	19	1	C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0	C9JFE4	GPS1	COP9 signalosome complex subunit 1	1	SPPREGS(0.979)QGELT(0.021)PANSQSR;SPPREGS(0.963)QGELT(0.037)PANSQSR;SPPREGS(1)QGELTPANSQSR;S(0.043)PPREGS(0.957)QGELTPANSQSR	138.46	1.5396e-08	80098000.0	4538.96	3838.18	4897.0	4857.28	3917.66	4017.92	4132.08	4419.469999999999	4406.38	4823.75	True	False	4339.432753197248	4472.374007094921	3869.186621464565	4431.449803813705	4432.900958466765	4794.326175274517	5058.8041248069785	4264.034735120555	4201.528355573992	3950.122131906807	1.0985566036416479	1.1322115766926961	0.9795106308768299	1.1218513392330356	1.1222187087989883	1.2137159346412902	1.2806703073671768	1.0794690879753166	1.0636451773570417	1.0	11.947681544628372	-6.218807198085876	18.76649880652585	1.1180410493177233	1.0985553371322363	0.0	0.08567718983544359	8832.802577050568	3886026.143034642	0.022573339065308885	3.5704720124772233	6.042168075535148e-07	6.218807198085876	-0.019485712185487003	
SPPREGSQGELT(ph)PANSQSR	ddPTM_K562_Methotrexat_30min_R1	1	SPPREGSQGELTPANSQSR	19	1	C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0	C9JFE4	GPS1	COP9 signalosome complex subunit 1	1	SPPREGSQGELT(0.999)PANS(0.001)QSR	101.33	0.0033954999999999996	74974000.0	688.47	558.04	719.19	937.44	511.22	575.14	760.57	726.04	775.8	674.29	True	False	658.2056831507016	650.2466249418349	568.2418473128649	855.2560906694943	578.4543906279202	686.2776651718762	931.1471833082713	700.5047616766105	739.7332273327086	552.1695469963082	1.1920354657934482	1.177621309394997	1.0291075456877092	1.5489012302868135	1.0476028491150886	1.242874890339551	1.686342878511728	1.268640701913418	1.3396849416211185	1.0	9.108967513034084	-7.233081544063805	24.993021667941274	1.3186502226840042	1.1373914465556014	0.1351986611735405	0.19703635418036414	1421.7195422068014	1253023.5182079328	0.05283266698505735	0.09148906360328608	5.8468029301110654e-08	7.233081544063805	-0.1812587761284028	
SPQPVCS(ph)PAGSEGTPK	ddPTM_K562_Methotrexat_30min_R1	2	SPQPVCSPAGSEGTPK	16	0	A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79	A0A590UJS4;Q6KC79	NIPBL	Nipped-B-like protein	1	SPQPVCS(0.997)PAGS(0.003)EGTPK;S(0.001)PQPVCS(0.938)PAGS(0.06)EGTPK	172.56	2.625e-07	19444600.0	4896.3	4125.2	7500.8	4675.299999999999	4093.8999999999996	4000.3999999999996	3756.8	5745.9	5266.1	6389.6	True	False	4681.064514664079	4806.819183589092	5926.484584496916	4265.4237078715305	4632.319607588987	4773.420683231168	4599.358031808401	5543.813440192876	5021.280160423791	5232.381523510076	0.8946336374041485	0.9186675631337563	1.1326552847624174	0.8151973797602828	0.885317629606156	0.9122845231723433	0.8790180936047227	1.0595201086318875	0.9596548221612345	1.0	12.353252024658678	-9.257688203124822	24.995527668969377	1.0071905986288863	0.9222094124470269	0.19524395412845974	0.08055230759735695	564.7117539205442	3762916.929692507	0.04064137732826449	0.02225375063564368	5.524739394297503e-10	9.257688203124822	-0.08498118618185935	
SPQPVPSPRPQSQPPHSS(ph)PSPR	ddPTM_K562_Methotrexat_30min_R1	1	SPQPVPSPRPQSQPPHSSPSPR	22	1	A0A669KB12;Q09472	A0A669KB12	EP300	Histone acetyltransferase p300	1	S(0.009)PQPVPS(0.071)PRPQS(0.048)QPPHS(0.286)S(0.351)PS(0.234)PR	67.778	0.0056565	27410000.0	608.75	507.0	635.7	568.82	652.94	428.25	620.31	681.53	599.82	517.81	True	False	581.990078896669	590.7731324734972	502.27525735450786	518.952433750023	738.8130546860339	511.00325157328	759.4303078979636	657.5602036051183	571.9344991218168	424.0295913185103	1.3725223211120343	1.3932356245150288	1.1845287867591845	1.223859005066963	1.7423620186240105	1.2051122422478278	1.7909842224372419	1.5507413092573326	1.3488079861204958	1.0	8.728021137956615														
SPQQTVPYVVPLS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	SPQQTVPYVVPLSPK	15	0	Q9UQR0;H0Y6S1;B4DRC2	Q9UQR0	SCML2	Sex comb on midleg-like protein 2	1	SPQQT(0.004)VPY(0.026)VVPLS(0.969)PK;SPQQT(0.242)VPY(0.002)VVPLS(0.756)PK	114.99	0.0011298	24293000.0	4196.5	4216.1	6848.1	4370.9	3386.8999999999996	3370.5	3283.0	4276.6	4013.1	5566.4	True	False	4012.0268847472184	4912.738863553275	5410.777394823663	3987.7099832600416	3832.336715343107	4021.80142306536	4019.2963209185964	4126.189554000044	3826.5318569333504	4558.271020481169	0.8801641821472279	1.0777636611512162	1.1870240647192811	0.874829505604759	0.8407434964098661	0.8823085343093137	0.8817589614261947	0.9052093514098434	0.8394700182898347	1.0	12.154270989932282	-7.296439431598894	24.653914549780986	0.8826241315390888	1.0512619585668466	0.4432789563109788	0.08146975143211774	420.69751251425225	296336.77606592036	0.02271603728693766	0.033694916938093	5.053131129623577e-08	7.296439431598894	0.16863782702775776	
SPQT(ph)RQAGQT(ph)RTRIQNPSAYAK	ddPTM_K562_Methotrexat_30min_R1	1	SPQTRQAGQTRTRIQNPSAYAK	22	3	H0Y4V9;Q92615	H0Y4V9	LARP4B	La-related protein 4B	2	S(0.075)PQT(0.922)RQAGQT(0.915)RT(0.082)RIQNPS(0.003)AY(0.003)AK	45.347	0.028743	30147000.0	2690.9	2348.7	3776.6	3186.0	2033.5	2175.0	2158.4	2467.2	2732.0	3504.1	True	False	2572.611257992684	2736.78275392604	2983.9432702926442	2906.6883265841084	2300.9408930438476	2595.2879677101764	2642.4761434878747	2380.427177577727	2604.9899163095643	2869.4735345767613	0.8965446891191267	0.9537577959678613	1.0398922430670778	1.0129692055211224	0.80186865824613	0.9044474313623435	0.9208923210639167	0.8295693091063245	0.9078285214760806	1.0	11.486570353017107	-7.739323439221359	24.99956591006561	0.8874363534149566	0.9787958539707449	0.2955184339785518	0.06120318050983791	277.96751597499474	314209.51555230585	0.017982976145403468	0.023197010778116183	1.8225378683734644e-08	7.739323439221359	0.09135950055578823	
SPRPQQDPARPQEPTMPPPETPSEGRQPS(ph)PSPSPTER	ddPTM_K562_Methotrexat_30min_R1	1	SPRPQQDPARPQEPTMPPPETPSEGRQPSPSPSPTER	37	3	P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-12;P29590-13;P29590-11;P29590-14;P29590-10;P29590-4;H3BT57	P29590-2;P29590-4	PML	Protein PML	1	S(0.001)PRPQQDPARPQEPT(0.019)MPPPET(0.182)PS(0.224)EGRQPS(0.442)PS(0.128)PS(0.003)PTER	52.69	0.00078271	21658000.0	929.08	664.49	1198.0	1096.9	1117.0	1084.3	1137.3	1186.2	1042.4	1225.3	True	False	888.2387556489812	774.2856781012109	946.5561716386662	1000.7364800471157	1263.905078696817	1293.8256291439754	1392.3684757175504	1144.4806736554397	993.9390515230936	1003.3862966002407	0.8852410668339679	0.7716725659147547	0.9433616692253709	0.9973591262287482	1.2596395655185728	1.289459138048652	1.3876694154936065	1.1406182021154434	0.9905846381307407	1.0	9.970661424905163	-7.444726241556119	2.1791504835787725	1.1999801851641974	0.8456627130464135	0.558700825180818	0.12348969287885532	0.22556510709359712	2.1137049151826908	0.04053688049529173	0.06611540769628538	3.5914825316722316e-08	7.444726241556119	-0.35431747211778386	
SPRS(ph)PQLSDFGLER	ddPTM_K562_Methotrexat_30min_R1	5	SPRSPQLSDFGLER	14	1	Q8IX90-3;Q8IX90	Q8IX90-3	SKA3	Spindle and kinetochore-associated protein 3	1	S(0.103)PRS(0.896)PQLS(0.001)DFGLER;S(0.002)PRS(0.97)PQLS(0.029)DFGLER;S(0.016)PRS(0.983)PQLS(0.001)DFGLER;S(0.115)PRS(0.885)PQLSDFGLER;S(0.058)PRS(0.903)PQLS(0.04)DFGLER	142.4	1.3905999999999999e-05	494276000.0	6885.799999999999	5535.2300000000005	7713.719999999999	7871.050000000001	5538.75	5839.280000000001	5205.13	5996.8	6861.24	6948.11	True	False	6583.108476824117	6449.832674677072	6094.715586220876	7181.007267093488	6267.192707817362	6967.638217972729	6372.512902498631	5785.889144981404	6542.26244999262	5689.739950437523	1.1570139468883631	1.1335900640206062	1.0711764754296391	1.262097623027796	1.1014901845093	1.2245969549868339	1.1200007307906235	1.0168986975470624	1.1498350552013437	1.0	12.474147000324407	-9.831389127382536	0.755147301485234	1.0102540686680694	1.1552410541938904	0.31550796410091997	0.06472247637894735	0.7611406912027158	0.9859328175204102	0.061070808191489745	0.024158698904430776	1.4743848940122404e-10	9.831389127382536	0.144986985525821	
SPS(ph)AIPEQNHSLNDQAK	ddPTM_K562_Methotrexat_30min_R1	1	SPSAIPEQNHSLNDQAK	17	0	Q13129	Q13129	RLF	Zinc finger protein Rlf	1	S(0.175)PS(0.825)AIPEQNHSLNDQAK	97.49	0.0015638	30491000.0	2319.4	1707.4	3662.7	2530.3	1991.1	1568.5	1657.4	2434.4	2500.9	3274.2	True	False	2217.441953171144	1989.518829162226	2893.949323757048	2308.4725275441865	2252.9645498596533	1871.5904263693844	2029.1141402042272	2348.780772168945	2384.633704867713	2681.210652353307	0.8270301146330626	0.7420225738011368	1.0793442586157935	0.8609814098411227	0.8402788299689243	0.6980393072534915	0.7567902724924904	0.8760150084095081	0.8893869277949915	1.0	11.388668855406191	-10.073195393179251	1.9264126247926818	0.9985378590276793	0.8329741550827584	0.2135550127834589	0.09755812770007113	0.7197435715769009	5.899660224333098	0.09952556762985017	0.027944194807002613	8.448986317809947e-11	10.073195393179251	-0.16556370394492093	
SPS(ph)DLLDASAVSATSR	ddPTM_K562_Methotrexat_30min_R1	1	SPSDLLDASAVSATSR	16	0	K7EJ05;K7EQ84;K7EPP9;K7ELY2;X6R2W0;K7EIY4;Q5U8S2;O60499-2;O60499	K7EJ05	STX10	Syntaxin-10	1	S(0.232)PS(0.768)DLLDASAVSATSR	107.82	0.0086542	0.0	427.97	457.62	475.93	457.58	451.84	347.13	450.76	315.52	406.28	585.68	True	False	409.15695123680877	533.2339267899835	376.0387969682725	417.46467183878116	511.2648798194896	414.2079596465441	551.8544043914911	304.4229827615615	387.3921314781298	479.6076766447639	0.8531075943137236	1.111812743533168	0.7840550001179342	0.8704295034626586	1.0660064563523939	0.86363913635465	1.1506371379460612	0.6347333405737826	0.8077271285318972	1.0	8.905710940621725	-9.270339735533547	24.99651157140828	0.7909227008993196	0.9536540621502605	0.17174105083725866	0.1409726452970556	1008.386038811803	2832017.8314499157	0.07169275846424834	0.03525535764716259	5.366118567947511e-10	9.270339735533547	0.1627313612509409	
SPS(ph)FGEDY(ph)Y(ph)GPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SPSFGEDYYGPSR	13	0	H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761-2;P49761-3;P49761-1;P49761	H3BRT8	CLK3	Dual specificity protein kinase CLK3	4	S(0.165)PS(0.835)FGEDY(1)Y(1)GPS(1)R	64.842	0.024465	4091500.0	310.39	283.97	406.81	418.99	298.99	297.75	218.63	265.6	376.41	419.97	True	False	296.74562725049213	330.8912158353037	321.42614038758416	382.257797223941	338.3124256755252	355.28597351066895	267.66334287006777	256.2586974564868	358.91078125844933	343.90936340749477	0.8628599823811172	0.9621465741926718	0.934624568528335	1.1115073850751995	0.98372554420585	1.0330802569329702	0.7782961772777212	0.7451344008707562	1.0436202658232936	1.0	8.425884585539581	-8.747444665676372	24.987254592431942	0.8705238890713908	0.9843562278687983	0.13955996604617715	0.1035493219730069	366.468289172352	654321.5689216662	0.039804894572485136	0.0306766912830401	1.7887734257686186e-09	8.747444665676372	0.1138323387974075	
SPS(ph)GSAFGSQENLR	ddPTM_K562_Methotrexat_30min_R1	3	SPSGSAFGSQENLR	14	0	Q96N67-4;Q96N67-3;Q96N67-2;Q96N67-6;Q96N67-5;Q96N67;A0A1B0GWE0	Q96N67-4	DOCK7	Dedicator of cytokinesis protein 7	1	S(0.166)PS(0.826)GS(0.008)AFGSQENLR;S(0.033)PS(0.849)GS(0.119)AFGSQENLR;S(0.145)PS(0.493)GS(0.362)AFGSQENLR	177.39	2.3875e-08	164550000.0	883.5799999999999	691.28	923.5699999999999	1139.33	961.92	873.4000000000001	691.16	894.0799999999999	917.22	1179.08	True	False	844.738881168819	805.502270249071	729.7252783308206	1039.4467078239404	1088.4293404655712	1042.172188964629	846.1702239311898	862.6346996306318	874.5786424002415	965.5371864811983	0.8748900539474649	0.8342529749523597	0.7557712831239881	1.0765475658292332	1.1272785302368733	1.0793703272711008	0.876372485470985	0.8934246259063474	0.9057948825229135	1.0	9.91518801365173	-7.258270085017531	24.99884385453223	0.9938671343866124	0.8228995898303099	0.46812276472626757	0.08424464734465058	288.228022466545	2273481.346005473	0.026859392595366648	0.04414062832231133	5.51734212516268e-08	7.258270085017531	-0.1709675445563026	
SPS(ph)MPENLNRPR	ddPTM_K562_Methotrexat_30min_R1	1	SPSMPENLNRPR	12	1	D6RJC2;H0Y999;P30307-4;P30307-3;P30307-2;P30307	D6RJC2	CDC25C	M-phase inducer phosphatase 3	1	SPS(1)MPENLNRPR	109.0	0.005991600000000001	10307000.0	1742.8	1264.9	2123.3	1871.0	1499.5	1492.7	1344.6	1470.7	1740.9	1697.8	True	False	1666.188598769798	1473.903225376186	1677.648346611336	1706.9723349148994	1696.7105331297023	1781.143149149877	1646.1607776750345	1418.9746473993048	1659.9659389836465	1390.311967981628	1.1984278616177573	1.0601241011511329	1.2066704345837185	1.2277620952892898	1.220381160634678	1.2811104199409535	1.1840225903146275	1.020616005671941	1.193952132479652	1.0	10.441192925999916	-9.965499803885624	0.8700622071035582	1.0112742796838685	1.1939603795437175	0.3612617065478687	0.07293792310492443	0.7056404161840238	1.2136211046128842	0.07302863827580178	0.02614735227118799	1.0826802040331304e-10	9.965499803885624	0.18268609985984896	
SPS(ph)PAHLPDDPKVAEK	ddPTM_K562_Methotrexat_30min_R1	2	SPSPAHLPDDPKVAEK	16	1	H0Y4V9;Q92615;A0A087X183;H0Y641	H0Y4V9	LARP4B	La-related protein 4B	1	S(0.049)PS(0.951)PAHLPDDPKVAEK;S(0.03)PS(0.97)PAHLPDDPKVAEK	120.08	0.00029323	95062000.0	8608.7	5511.2	15095.800000000001	9763.4	6057.9	5186.3	4532.7	7149.299999999999	7717.0	11661.0	True	False	8230.271855766332	6421.832125617231	11927.397876313007	8907.457880656404	6854.620032441761	6188.479074453005	5549.273357851879	6897.855066738182	7358.2383543780825	9549.079902599697	0.8618916104708345	0.6725079474797268	1.2490625272771907	0.9328079743296929	0.717830419512525	0.6480707186006703	0.5811317335758299	0.7223580844537986	0.7705704035814837	1.0	13.221146014260109	-7.763091569960858	8.783467124585838	0.7133825675938718	0.933834179873713	0.22532543787816328	0.16736186661681487	0.1478075620377063	124.18072558485375	0.05151404518370048	0.0620842093523512	1.7254740415262215e-08	7.763091569960858	0.22045161227984122	
SPS(ph)PGPNHTSNSSNASNATVVPQNSSAR	ddPTM_K562_Methotrexat_30min_R1	1	SPSPGPNHTSNSSNASNATVVPQNSSAR	28	0	A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9	A0A0A0MRT2	WAC	WW domain-containing adapter protein with coiled-coil	1	S(0.13)PS(0.435)PGPNHT(0.399)S(0.03)NS(0.004)S(0.001)NASNATVVPQNSSAR	108.68	1.1714e-11	11629000.0	168.86	241.14	266.2	186.69	213.43	182.01	192.08	299.55	114.68	263.35	True	False	161.43711658725502	280.9842863208264	210.32825783824117	170.3231775549239	241.4997859859103	217.18085655307092	235.1588295224013	289.0146567134437	109.34855183103255	215.6547630863244	0.7485905447988338	1.3029356843296398	0.9753007762413711	0.7897955747295284	1.1198444334347506	1.0070765581288628	1.0904411576955044	1.3401728418943109	0.5070537291460677	1.0	7.752579770466349	-9.76702528055247	24.999977567965832	0.7535270661648341	1.0469288937379826	0.23735262063400697	0.21025745130641182	203.92394024317176	912624.4814301077	0.1747331856289083	0.05012807941701165	1.7099157769301274e-10	9.76702528055247	0.2934018275731485	
SPS(ph)PPTQHTGQPPGQPSAPSQLSAPR	ddPTM_K562_Methotrexat_30min_R1	1	SPSPPTQHTGQPPGQPSAPSQLSAPR	26	0	Q68EM7-7;Q68EM7-3;Q68EM7-2;Q68EM7-6;Q68EM7-5;Q68EM7;I3L460	Q68EM7-7	ARHGAP17	Rho GTPase-activating protein 17	1	S(0.156)PS(0.638)PPT(0.156)QHT(0.051)GQPPGQPSAPSQLSAPR	63.272	0.0019425999999999998	284330000.0	2054.4	1700.3	1929.2	2153.1	1671.7	1534.4	1754.9	1831.4	1910.3	2078.6	True	False	1964.0910358691028	1981.2456748415905	1524.2872840778925	1964.3410659034041	1891.557851439096	1830.9010839790797	2148.480997130686	1766.988623952599	1821.4905699583326	1702.145397954182	1.1538914585262543	1.1639697038941919	0.8955094470248792	1.1540383496406104	1.111278656754335	1.0756431772395294	1.2622194318493338	1.0380949982747376	1.070114557867731	1.0	10.733138562548534	-9.843779902599533	2.108604430861389	1.0094300046585174	1.109517938124652	0.12287485904996698	0.09028251061295352	0.6602434651684882	5.972575672413095	0.08578189790607967	0.024334896432069274	1.4329139060180442e-10	9.843779902599533	0.10008793346613465	
SPS(ph)SESSPQHPTPPARPR	ddPTM_K562_Methotrexat_30min_R1	1	SPSSESSPQHPTPPARPR	18	1	O14733;O14733-4;O14733-3;O14733-2	O14733	MAP2K7	Dual specificity mitogen-activated protein kinase kinase 7	1	S(0.103)PS(0.291)S(0.248)ES(0.155)S(0.133)PQHPT(0.069)PPARPR	71.148	0.017332	21227000.0	380.02	397.1	605.75	615.41	454.04	611.62	483.39	706.97	577.25	648.04	True	False	363.3147758230999	462.71402545409364	478.6113530635407	561.4579607856647	513.7542183809337	729.8069088785743	591.8025125095456	682.1054643855895	550.4137734954967	530.6736763640089	0.6846293532258961	0.871937022813057	0.901893902751723	1.058009819956737	0.9681170204276922	1.3752461095846262	1.1151910088406312	1.2853576402340858	1.0371981841397149	1.0	9.051681176585312	-6.948349071831471	0.8409231313884	1.1674931418377266	0.6596698000435657	0.607577341252911	0.1185109788239009	0.6734438074320113	0.6957965638362712	0.04721924279006126	0.2656886222175919	1.126291815397586e-07	6.948349071831471	-0.5078233417941609	
SPS(ph)TASLT(ph)RTPS(ph)RAS(ph)LT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SPSTASLTRTPSRASLTR	18	2	Q9UF83	Q9UF83		Uncharacterized protein DKFZp434B061	5	S(0.354)PS(0.422)T(0.154)AS(0.186)LT(0.721)RT(0.19)PS(0.993)RAS(0.99)LT(0.989)R	41.903999999999996	0.033902	0.0	635.1	614.73	844.17	856.38	649.5	556.08	533.59	851.29	789.59	770.66	True	False	607.1817644472677	716.3036838765931	666.9902532656203	781.3024950157253	734.9206343899575	663.534589923805	653.2611403834762	821.3496481842348	752.8821332426314	631.0860061519152	0.962122053933021	1.1350333819700706	1.0568927955361163	1.2380285530014588	1.1645332446383658	1.0514170548159467	1.0351380541089403	1.3014860734949005	1.1929944982196254	1.0	9.301692822864391	-5.43674843647995	1.3010825935520742	1.1415607023749803	1.2799981893833999e-09	0.22387952907197106	0.09207354953010184	15.544214867789288	4.603491586005689	0.027202920973369543	39.508706890167176	3.6580662242932064e-06	5.43674843647995	-1.1415607010949822	
SPS(ph)WY(ph)LS(ph)RIK	ddPTM_K562_Methotrexat_30min_R1	1	SPSWYLSRIK	10	1	Q9NTG1	Q9NTG1	PKDREJ	Polycystic kidney disease and receptor for egg jelly-related protein	3	S(0.07)PS(0.935)WY(0.995)LS(1)RIK	80.737	0.030713999999999998	61175000.0	1773.5	1547.6	2139.7	1445.5	1803.3	1549.4	1683.8	1888.7	1686.0	2176.7	True	False	1695.539063528939	1803.314595297799	1690.6062107305963	1318.7752592835318	2040.465558114566	1848.7996216874255	2061.435012233546	1822.2733504746495	1607.6182280007056	1782.4785373457476	0.9512255143636859	1.0116893738216215	0.9484581021929406	0.7398547761743561	1.1447349942025005	1.0372072274376078	1.1564992054845085	1.0223255496743089	0.9019004685434121	1.0	10.79966899008229	-7.790821681268975	24.99992656849206	1.0502016696504601	0.9224160853208478	0.3142206168343249	0.09407538271146963	270.9717639989153	230554.7127411117	0.03015299933458818	0.0341953205182198	1.6187445480946397e-08	7.790821681268975	-0.1277855843296123	
SPSDLSPES(ph)PMLSSPPK	ddPTM_K562_Methotrexat_30min_R1	1	SPSDLSPESPMLSSPPK	17	0	A0A0J9YXY4;A0A0J9YW36;Q9NZ72-2;Q9NZ72	A0A0J9YXY4	STMN3	Stathmin-3	1	SPSDLS(0.308)PES(0.669)PMLS(0.017)S(0.006)PPK	73.833	0.028428	0.0	1173.6	814.44	1167.5	969.75	782.49	813.0	762.23	1072.4	923.11	1187.8	True	False	1122.0099492289617	949.0123668870114	922.4577048315052	884.7335231340056	885.4011504292504	970.1007437923554	933.1794805646604	1034.6830841578937	880.1948175858428	972.6779099826706	1.1535267098323962	0.9756697023210069	0.9483691316151509	0.9095852944267729	0.9102716750758993	0.9973504423572639	0.959392077261512	1.0637468719489351	0.904919098657771	1.0	9.925818343600943	-6.262476004332178	4.40991405927112	0.9614500757047394	1.1668643531497676	0.5990280310126278	0.046822297349744024	0.1396943030520751	6.71129248854122	0.011919417937636075	0.08970773335492839	5.464167397021467e-07	6.262476004332178	0.20541427744502816	
SPSDSSTAST(ph)PVAEQIER	ddPTM_K562_Methotrexat_30min_R1	2	SPSDSSTASTPVAEQIER	18	0	Q16643;Q16643-2;Q16643-3;D6R9Q9	Q16643	DBN1	Drebrin	1	SPSDSST(0.041)AS(0.22)T(0.738)PVAEQIER;SPSDSSTAS(0.209)T(0.791)PVAEQIER	227.88	1.64e-44	39266000.0	2695.7	2698.1000000000004	2895.4	3232.3	2352.9	2667.1	2545.3	3362.5	3335.5	3088.8999999999996	True	False	2577.20025574004	3143.9151651415027	2287.6951079821315	2948.9292774694995	2662.347591464407	3182.479328128649	3116.148317281177	3244.2389691168564	3180.433333034611	2529.4702779470213	1.0188695547084101	1.2429144523070577	0.9044166788308261	1.1658287915772314	1.052531676167878	1.2581603966153836	1.2319371152328058	1.2825764340468782	1.257351533545564	1.0	11.304619571796849	-8.260493469563665	24.999956318707675	1.2252868768935044	1.0814912961178007	0.24034470914522765	0.11201567848614619	111.24709826714516	2940230.5547436927	0.03571210529103169	0.033761491520995994	5.489168095441232e-09	8.260493469563665	-0.14379558077570365	
SPSLSPSPPS(ph)PLEKTPLGER	ddPTM_K562_Methotrexat_30min_R1	3	SPSLSPSPPSPLEKTPLGER	20	1	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	SPS(0.002)LS(0.006)PS(0.124)PPS(0.867)PLEKTPLGER;SPSLSPS(0.015)PPS(0.976)PLEKT(0.008)PLGER;SPSLSPS(0.002)PPS(0.998)PLEKTPLGER	109.84	0.00012693	49696700.0	4086.14	3094.27	5393.299999999999	4469.92	3071.7599999999998	3055.56	2506.48	3837.13	3526.84	5122.1	True	False	3906.518178205885	3605.5455239028947	4261.320033805355	4078.049053598509	3475.7502815915263	3646.003725340924	3068.6219440926097	3702.1759629940134	3362.877978198107	4194.438055836196	0.931356745814926	0.8596015666237081	1.0159453965176808	0.9722515863416454	0.828656958410751	0.8692472452341563	0.731593100969244	0.8826393222908029	0.8017469642969108	1.0	12.034261825157195	-7.766859420333185	24.99852127512732	0.8412565103365635	0.9437866364250943	0.26563567801398247	0.07395952057716669	161.8450201774859	746466.8321461052	0.022029496058915937	0.025702209560529442	1.7105689309079558e-08	7.766859420333185	0.10253012608853085	
SPSPAS(ph)T(ph)S(ph)TVPNMT(ph)DAPTAPK	ddPTM_K562_Methotrexat_30min_R1	1	SPSPASTSTVPNMTDAPTAPK	21	0	Q659A1	Q659A1	ICE2	Little elongation complex subunit 2	4	S(0.437)PS(0.494)PAS(0.55)T(0.548)S(0.747)T(0.225)VPNMT(0.927)DAPT(0.073)APK	42.791000000000004	0.029049000000000002	10685000.0	224.07	194.79	364.93	264.98	189.86	161.54	167.39	145.87	178.19	118.44	True	False	214.22015109384242	226.97573663611922	288.33618006352117	241.74961480799047	214.82991785262107	192.7553187604147	204.9314685222551	140.73966942009696	169.90598579326556	96.98936829293439	2.2086972506804976	2.3402125473236457	2.972863780210086	2.4925372652994358	2.2149841950076015	1.9873860625449273	2.1129271396356155	1.4510834733454983	1.7518001074107739	1.0	6.599754706602584	-9.317328343575696	0.5487590560227635	1.042712338523558	2.549924136239167	0.7879737647613446	0.2411193050038305	0.37108959287200016	0.24952995630571262	0.25127402344810773	0.15110941762528723	4.815835639879522e-10	9.317328343575696	1.507211797715609	
SPSPGGPQLS(ph)PQLPR	ddPTM_K562_Methotrexat_30min_R1	3	SPSPGGPQLSPQLPR	15	0	H7C1V4;Q9HCH0-2;Q9HCH0	H7C1V4	NCKAP5L	Nck-associated protein 5-like	1	S(0.001)PS(0.007)PGGPQLS(0.992)PQLPR;S(0.07)PS(0.115)PGGPQLS(0.815)PQLPR;SPSPGGPQLS(1)PQLPR	185.74	6.246e-06	284096000.0	2575.2400000000002	2327.3	3242.05	2428.19	2481.96	2838.42	2486.19	2622.49	2504.55	2472.3	True	False	2462.035533105309	2711.8467676638465	2561.5880102346737	2215.314352708182	2808.3812436189355	3386.904493474908	3043.781395097349	2530.2555402585176	2388.114017164393	2024.5425129231824	1.21609475592115	1.3394862050825913	1.2652675821245492	1.0942296042524438	1.38716832355572	1.6729233749626962	1.5034415803412866	1.2497912610415622	1.1795820546718279	1.0	10.983380222830561	-9.916966902237686	2.1075934463078276	1.008308803442717	1.3523430987140193	0.34810544821220635	0.15026759362205194	0.37121490832816934	3.599289597663309	0.16137435865421274	0.045276681718578335	1.210690397251251e-10	9.916966902237686	0.34403429527130225	
SPSPPT(ph)QHTGQPPGQPSAPSQLSAPR	ddPTM_K562_Methotrexat_30min_R1	2	SPSPPTQHTGQPPGQPSAPSQLSAPR	26	0	Q68EM7-7;Q68EM7-3;Q68EM7-2;Q68EM7-6;Q68EM7-5;Q68EM7;I3L460	Q68EM7-7	ARHGAP17	Rho GTPase-activating protein 17	1	S(0.018)PS(0.018)PPT(0.567)QHT(0.397)GQPPGQPSAPSQLSAPR;S(0.106)PS(0.386)PPT(0.458)QHT(0.05)GQPPGQPSAPSQLSAPR	84.221	0.00087375	298860000.0	1942.48	1577.18	2618.2	1942.8400000000001	1472.35	1734.4499999999998	1647.5	1994.12	2040.26	2338.07	True	False	1857.0909050598796	1837.7821875237664	2068.6755998199974	1772.5142336536942	1665.9898322464278	2069.6079152160532	2016.9938131932342	1923.9856693220245	1945.408757924506	1914.6228666384764	0.9699512825313706	0.959866415233189	1.080461137211838	0.9257772193882319	0.8701399431060927	1.0809480818797939	1.0534679431330995	1.0048901550517813	1.016079350049799	1.0	10.902844529547103	-8.292228519553166	24.996963099000393	1.0327821595042734	0.9658162131619745	0.2951615000724691	0.053695916364517086	1004.9497751898293	815890.6336076856	0.02006969483506769	0.017701952183705332	5.102364501959025e-09	8.292228519553166	-0.06696594634229891	
SPSPS(ph)FR	ddPTM_K562_Methotrexat_30min_R1	1	SPSPSFR	7	0	P49585;C9JEJ2	P49585	PCYT1A	Choline-phosphate cytidylyltransferase A	1	S(0.056)PS(0.338)PS(0.606)FR	87.696	0.022808000000000002	13872000.0	1913.1	1925.9	2060.4	2035.1	1797.2	2012.7	1825.1	1975.3	1910.1	2000.3	True	False	1829.0024146812607	2244.1222402972535	1627.9501970319757	1856.6859426965864	2033.5633011941995	2401.625789705872	2234.425134117737	1905.827579389301	1821.2998679146772	1638.0262866966966	1.1165891716974172	1.3700160116617126	0.9938486398255301	1.1334897112309759	1.2414717136775364	1.466170481640486	1.364096017423359	1.163490228983237	1.111886837657274	1.0	10.67774279388928	-9.866433055634609	2.237614453693402	1.0083138026635934	1.2403988188285666	0.24753657806829854	0.1319044156888078	0.42871426471576585	4.414597053653873	0.13474267241536558	0.03777074847983754	1.360087797993675e-10	9.866433055634609	0.23208501616497323	
SPSS(ph)DLDTDAEGDDFELLDQSELSQLDPASSR	ddPTM_K562_Methotrexat_30min_R1	3	SPSSDLDTDAEGDDFELLDQSELSQLDPASSR	32	0	K7EQI9;Q86VR2-2;Q86VR2	K7EQI9	FAM134C	Protein FAM134C	1	S(0.047)PS(0.209)S(0.744)DLDTDAEGDDFELLDQSELSQLDPASSR;S(0.058)PS(0.224)S(0.718)DLDTDAEGDDFELLDQSELSQLDPASSR;S(0.197)PS(0.197)S(0.605)DLDTDAEGDDFELLDQSELSQLDPASSR	179.09	8.073899999999999e-46	52027300.0	1263.4	992.85	1483.58	1109.65	1080.35	1020.38	1053.67	1055.66	1036.59	1415.32	True	False	1207.862448752445	1156.9015869355255	1172.1968323202775	1012.3687073427681	1222.4349612982155	1217.5539937894769	1289.9823193610405	1018.531839446216	988.3991571549533	1158.9918332687935	1.0421664882191775	0.9981964960638483	1.011393522087417	0.8734908031987655	1.0547399267262207	1.0505285359565615	1.1130210604873758	0.8788084697487235	0.8528094234860097	1.0	10.17865468522207	-9.288656236765787	24.96426216993294	0.899356685135127	1.0161138462471553	0.3503186745718134	0.06793283475015283	831.8797266868854	763024.2472917971	0.0381601139044147	0.018338541289090713	5.144507008787497e-10	9.288656236765787	0.11675716111202827	
SPSS(ph)ESSPQHPTPPARPR	ddPTM_K562_Methotrexat_30min_R1	1	SPSSESSPQHPTPPARPR	18	1	O14733;O14733-4;O14733-3;O14733-2	O14733	MAP2K7	Dual specificity mitogen-activated protein kinase kinase 7	1	S(0.082)PS(0.082)S(0.353)ES(0.266)S(0.202)PQHPT(0.016)PPARPR	81.327	0.0058007	4229800.0	171.46	277.28	468.08	339.67	256.67	498.02	367.66	404.63	490.07	521.17	True	False	163.92282370040712	323.09580704586034	369.8364046916753	309.8916584716964	290.4266038935651	594.2553166340335	450.1171140264787	390.3989335535329	467.28675266684775	426.7810627594446	0.38409113712902093	0.7570528199091474	0.8665717318861774	0.7261138919051969	0.6805048987313297	1.3924125704916432	1.0546792097947126	0.9147522409483795	1.0949097639091692	1.0	8.737352351716893	-8.227160838910683	24.879829500063977	1.0837308252911764	0.6995966860975167	0.6118049154496875	0.1623611173435789	440.1601777199275	319474.5559813994	0.054920589874498056	0.05491765870706982	5.9270577814227155e-09	8.227160838910683	-0.3841341391936597	
SPSSES(ph)SPQHPTPPARPR	ddPTM_K562_Methotrexat_30min_R1	1	SPSSESSPQHPTPPARPR	18	1	O14733;O14733-4;O14733-3;O14733-2	O14733	MAP2K7	Dual specificity mitogen-activated protein kinase kinase 7	1	S(0.015)PS(0.015)S(0.041)ES(0.514)S(0.399)PQHPT(0.017)PPARPR	87.35600000000001	0.0038469000000000003	4122100.0	181.57	281.21	413.79	192.84	288.77	343.05	350.89	179.75	373.65	242.31	True	False	173.5884002057793	327.67517274728226	326.9411337749281	175.93401660341485	326.74831654008943	409.3395573898741	429.5860146351279	173.42809061673015	356.2790930560283	198.42531096809293	0.8748299264789489	1.6513778970464756	1.6476785757815984	0.8866510816843587	1.6467068386886945	2.062940233747178	2.1649758921340734	0.8740220175067163	1.795532491887179	1.0	7.632452256220646														
SPSSESS(ph)PQHPTPPARPR	ddPTM_K562_Methotrexat_30min_R1	1	SPSSESSPQHPTPPARPR	18	1	O14733;O14733-4;O14733-3;O14733-2	O14733	MAP2K7	Dual specificity mitogen-activated protein kinase kinase 7	1	S(0.012)PS(0.066)S(0.266)ES(0.095)S(0.541)PQHPT(0.02)PPARPR	80.303	0.0061325	12654000.0	395.47	183.54	201.88	281.39	369.21	264.93	237.45	255.54	286.47	305.94	True	False	378.0856123224076	213.86686535342326	159.50814685343397	256.7209755861591	417.7675864867073	316.1239730048079	290.7042069455133	246.55251335854913	273.1520722273796	250.53130138078657	1.5091352267705231	0.8536532727635641	0.6366795125970904	1.0247061910877346	1.6675265093990614	1.2618142773478271	1.1603508437601069	0.9841185991518481	1.090291196037861	1.0	7.968847054774747	-6.238155556605793	23.146562164315085	1.0866443010052094	1.509136540473217	0.20497395089654846	0.2553747989595583	4404.014019520179	4377867.492220599	0.07113526466192721	3.4328979513272047	5.778890207002074e-07	6.238155556605793	0.42249223946800774	
SPSSESSPQHPT(ph)PPARPR	ddPTM_K562_Methotrexat_30min_R1	1	SPSSESSPQHPTPPARPR	18	1	O14733;O14733-4;O14733-3;O14733-2	O14733	MAP2K7	Dual specificity mitogen-activated protein kinase kinase 7	1	SPSSES(0.004)S(0.111)PQHPT(0.886)PPARPR	105.53	0.004102000000000001	10124000.0	947.51	1200.8	1391.6	924.57	993.32	1038.6	906.59	1322.9	1199.8	1834.1	True	False	905.8585949164398	1399.2117898898912	1099.5221773392047	843.5143835875302	1123.9589908425453	1239.2947509258806	1109.9158853431588	1276.3728571731424	1144.021559878557	1501.9267172076236	0.6031310213327908	0.9316112256737136	0.7320744512644612	0.5616215318120107	0.7483447614090024	0.8251366306539727	0.7389947010242351	0.8498236582049555	0.761702649517759	1.0	10.552598706502028	-11.073041323889708	0.375684005413637	1.0505748290773156	0.722581377005122	0.3877801481380465	0.09969936094251894	5.613663648130315	1.0386405657496856	0.5246525175532255	0.08001597862761574	8.451984192063755e-12	11.073041323889708	-0.32799345207219355	
SPT(ph)PPLFSLPEAR	ddPTM_K562_Methotrexat_30min_R1	1	SPTPPLFSLPEAR	13	0	J3KRD7;J3QQZ3;J3KT14;A0A087WWS1;Q96FV9-2;Q96FV9	J3KRD7	THOC1	THO complex subunit 1	1	S(0.151)PT(0.849)PPLFSLPEAR	147.52	2.8075e-08	11273000.0	1324.5	1327.4	1910.4	1532.0	1487.3	1555.4	1159.0	1483.4	1231.1	1546.5	True	False	1266.2765659115194	1546.73028805783	1509.4331471606906	1397.6919385834453	1682.9060192889665	1855.9590367707635	1418.9352531052853	1431.227981200877	1173.86642971036	1266.4138641086045	0.999891585048951	1.2213466165316604	1.191895627440198	1.1036612739289964	1.3288752334320977	1.4655233090622586	1.1204356595574991	1.130142382173209	0.9269216509538246	1.0	10.30653323928902	-9.51664969627284	2.308025785517353	0.9656313476099296	1.2163774423758897	0.37368350469678924	0.12173090461592373	0.3458449923911943	3.4148680515390253	0.10634415189860313	0.03544456746553796	3.0433388056092895e-10	9.51664969627284	0.2507460947659601	
SPVDIVTGGIS(ph)PVRDLDR	ddPTM_K562_Methotrexat_30min_R1	3	SPVDIVTGGISPVRDLDR	18	1	E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494C0R9;H0YAC6;A0A494BZW2;H0Y9N9	E9PEM5	LRBA	Lipopolysaccharide-responsive and beige-like anchor protein	1	SPVDIVT(0.052)GGIS(0.948)PVRDLDR;SPVDIVT(0.004)GGIS(0.996)PVRDLDR;SPVDIVT(0.027)GGIS(0.973)PVRDLDR	86.83200000000001	0.0040165	44178400.0	5366.650000000001	5380.4	6896.139999999999	5425.14	4763.87	4665.71	5138.6	5322.01	5401.23	5934.02	True	False	5130.738491845272	6269.419648837086	5448.734455329106	4949.526399273232	5390.402405775658	5567.292424747151	6291.06185643384	5134.831891756017	5150.127996218415	4859.31147617054	1.0558570935421152	1.2901868257635967	1.1212976328125956	1.018565371564489	1.1092934528295875	1.145695733242963	1.2946405858699173	1.056699476239915	1.0598472687898282	1.0	12.246536195142475	-9.494007925464828	24.993828105255773	1.0393734552487328	1.1479639039580398	0.262222520650952	0.08435054098174763	977.1132440671919	845903.7659496933	0.0476902719098182	0.022841222700217153	3.206210813647151e-10	9.494007925464828	0.10859044870930701	
SPVIGS(ph)EVFLPNSNHVASGAGEAEER	ddPTM_K562_Methotrexat_30min_R1	1	SPVIGSEVFLPNSNHVASGAGEAEER	26	0	P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2;P29590-12;P29590-13;P29590-11	P29590-2	PML	Protein PML	1	S(0.465)PVIGS(0.535)EVFLPNSNHVASGAGEAEER	86.039	0.00018922	17695000.0	697.86	413.85	1034.8	679.92	692.88	594.57	350.58	738.71	783.85	893.42	True	False	667.1829099939699	482.23167825277426	817.6096213787077	620.3124692439011	784.0058647515225	709.4622376834205	429.206489243875	712.7291505951863	747.4089845897704	731.6129805831936	0.9119342161782528	0.6591349402635954	1.117543896948033	0.847869687535381	1.0716128411589483	0.9697234145816878	0.5866578377296422	0.9741887712640714	1.0215906557507841	1.0	9.514936861986653	-6.943789530050489	0.015447796889320414	1.7747145656600734	2.6672974516285476e-06	0.03954309961397484	0.1605624381819322	9246.597196087183	28.239860482811473	1482.250091066309	1768.497873992106	1.138178742024653e-07	6.943789530050489	-1.7747118983626218	
SPYEAENS(ph)GEELDQR	ddPTM_K562_Methotrexat_30min_R1	1	SPYEAENSGEELDQR	15	0	R4GMT1;Q9NPC7-3;Q9NPC7-2;Q9NPC7	R4GMT1	MYNN	Myoneurin	1	S(0.008)PYEAENS(0.992)GEELDQR	147.53	3.601e-21	0.0	800.59	827.49	889.94	933.11	748.67	713.67	939.17	754.34	674.34	600.29	True	False	765.3970221993986	964.2186575749392	703.1537557496781	851.3056950467351	847.1332276346877	851.5766270876883	1149.8027796884298	727.8094346360174	642.9900805871861	491.57166407096935	1.557040566294514	1.9615017057527806	1.430419625749954	1.7318038391322534	1.7233158246330185	1.732354993848352	2.3390338860590427	1.4805764608330676	1.308029179839699	1.0	8.941257945838217	-9.780348984207787	2.4761406632218343	1.0472685870334097	1.7728742123366763	0.5274133554415921	0.23913851149013085	0.2129868821233432	2.4768929633012564	0.22280515779758708	0.06314862694314317	1.6582538557684115e-10	9.780348984207787	0.7256056253032666	
SPYGSRS(ph)PFEHSVEHK	ddPTM_K562_Methotrexat_30min_R1	2	SPYGSRSPFEHSVEHK	16	1	O14646	O14646	CHD1	Chromodomain-helicase-DNA-binding protein 1	1	S(0.028)PY(0.105)GS(0.138)RS(0.725)PFEHS(0.003)VEHK;S(0.152)PY(0.014)GS(0.152)RS(0.683)PFEHSVEHK	78.508	0.021986000000000002	143120000.0	9940.0	7447.200000000001	13412.2	10204.7	7776.9	7576.5	6637.6	8940.6	8846.0	12667.7	True	False	9503.049501819938	8677.723219243842	10597.162508557692	9310.06979481885	8799.698662951903	9040.551396485587	8126.25076446216	8626.154030419677	8434.75139080323	10373.456777477251	0.9160928421134281	0.8365314865999953	1.0215652058787337	0.8974896213027834	0.8482899048712212	0.8715080797477601	0.7833696075261813	0.831560222928648	0.8131090312263778	1.0	13.340609107326685	-7.674440156931785	4.323275992874739	0.8463577226773845	0.922005112040758	0.1490505576706478	0.06849705101604447	0.3452761906240837	11.833820957436352	0.020106459177061407	0.025995226764544556	2.1162152664031906e-08	7.674440156931785	0.07564738936337345	
SPYQEFTDHLVK	ddPTM_K562_Methotrexat_30min_R1	1	SPYQEFTDHLVK	12	0	H0YEN5;P15880;E9PQD7	H0YEN5	RPS2	40S ribosomal protein S2	0		106.79	0.0049756	5925700.0	3276.2	2193.6	3476.1	2584.8	1919.7	2216.3	2070.1	2704.5	2817.2	3745.6	False	True	3132.182170811116	2556.05511517527	2746.51411371717	2358.1945971608943	2172.174198365514	2644.5686082004904	2534.3726207534514	2609.3812020748082	2686.22898690604	3067.235544393913	1.0211743198320415	0.8333416453284965	0.895436321718775	0.7688338776169452	0.7081863022667652	0.8621993876649138	0.8262725780501622	0.8507273615957078	0.8757817741828627	1.0	11.582723245424406	-11.670443781795996	23.065439250582855	0.999999999999995	0.8432605346768169	0.2516667996392663	0.07747195812420385	0.0	0.0	0.07672431583580522	0.01860837989672204	2.135778538702483e-12	11.670443781795996	-0.15673946532317806	
SQANGAGALSYVS(ph)PNTSK	ddPTM_K562_Methotrexat_30min_R1	2	SQANGAGALSYVSPNTSK	18	0	O95453;O95453-3;O95453-2;A0A494C0W0;A0A494C0K5;A0A494C0Q6;A0A494C002;A0A494C1N1;A0A494C0Q2;F5H1Z4;A0A494C1K5;A0A494C0P9;A0A494BZU6;A0A494C1G3;A0A494C156;A0A494BZW7	O95453	PARN	Poly(A)-specific ribonuclease PARN	1	SQANGAGALSYVS(0.997)PNT(0.003)SK;S(0.002)QANGAGALS(0.006)YVS(0.853)PNT(0.119)S(0.02)K	264.1	9.370999999999998e-116	20005300.0	3623.4	2782.8	5258.0	3798.6	2898.3999999999996	2423.6000000000004	2139.7	3213.6	3186.8	4393.0	True	False	3464.119674536656	3242.6104004876656	4154.417654821459	3465.5826357069695	3279.5904029497347	2891.9263993298323	2619.5821924671086	3100.575866514179	3038.6463635780815	3597.385130959649	0.962954909866033	0.901379830750192	1.154843727758783	0.9633615833572095	0.9116595203346665	0.8038968011630085	0.7281906432321027	0.8618971151657204	0.8446819711981973	1.0	11.812732905292517	-7.909217869120745	2.7445320051261777	0.8329273588031503	1.0019413112098103	0.3813064457898653	0.08778708928036623	0.2619591087598521	3.9995130096204146	0.02957928958717474	0.03403147142324428	1.232486386296893e-08	7.909217869120745	0.16901395240666006	
SQAPLES(ph)SLDSLGDVFLDSGRK	ddPTM_K562_Methotrexat_30min_R1	1	SQAPLESSLDSLGDVFLDSGRK	22	1	A0A087WY61;Q14980-5;Q14980-2;Q14980;H0YFY6	A0A087WY61	NUMA1	Nuclear mitotic apparatus protein 1	1	SQAPLES(0.5)S(0.5)LDSLGDVFLDSGRK	132.77	2.0975e-09	5609400.0	1562.5	1079.3	2492.7	1684.5	1066.9	1264.6	1110.1	1429.6	1536.6	1812.6	True	False	1493.814370884674	1257.635980036776	1969.5163347610203	1536.8225003549699	1207.2160505475688	1508.9660523982946	1359.0681833237068	1379.320157695007	1465.1638013913903	1484.3205755468832	1.006396054527704	0.8472805677933908	1.3268807070436057	1.0353710146399762	0.8133122119544708	1.0166038773951045	0.9156163471108467	0.9292602827302385	0.9870939105264138	1.0	10.53558699576149	-7.544546597349987	24.971630976539103	0.9407192263577524	1.0626003863335796	0.1669160016236938	0.12156601089860562	405.37669807917956	467183.19276529143	0.03616106826024292	0.046687910524775895	2.8539962796441556e-08	7.544546597349987	0.12188115997582716	
SQAQQPQKEAALS(ph)S	ddPTM_K562_Methotrexat_30min_R1	4	SQAQQPQKEAALSS	14	1	Q3MHD2;Q3MHD2-2	Q3MHD2	LSM12	Protein LSM12 homolog	1	SQAQQPQKEAALS(0.577)S(0.423);SQAQQPQKEAALS(0.613)S(0.387);SQAQQPQKEAALS(0.582)S(0.418);SQAQQPQKEAALS(0.554)S(0.446)	171.15	6.263e-05	80439500.0	19916.8	14958.8	28653.4	25427.199999999997	14324.5	13867.500000000002	14111.699999999999	17710.4	18062.0	24946.399999999998	True	False	19041.281319702946	17430.487443874834	22639.442911879258	23198.036854274793	16208.422828820556	16547.198111365935	17276.607947580553	17087.515193649717	17222.301562365796	20428.365224441557	0.9321001025045788	0.853249256725648	1.1082356646332254	1.135579700059379	0.7934273080955081	0.8100108809278584	0.8457166179362176	0.836460235849187	0.8430582365817574	1.0	14.318286136877704	-7.781051540197874	24.99995323985626	0.8439103628263024	1.0034985557238296	0.3953394355125409	0.09176553393177832	250.79172168544932	319686.80760409986	0.02994382585839833	0.03399985075565251	1.655573475483861e-08	7.781051540197874	0.15958819289752724	
SQASMVINS(ph)DT(ph)DDEEEVSAALTLAHLK	ddPTM_K562_Methotrexat_30min_R1	1	SQASMVINSDTDDEEEVSAALTLAHLK	27	0	Q14676;Q14676-3;Q14676-2;Q14676-4	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	2	S(0.006)QAS(0.02)MVINS(0.985)DT(0.985)DDEEEVS(0.003)AALTLAHLK	80.847	0.00087746	7003700.0	1490.9	936.38	1543.9	1332.2	1031.8	996.84	1045.2	1146.5	1230.3	1511.2	True	False	1425.3618211532535	1091.1008792614057	1219.85648864185	1215.408094373933	1167.4997853172576	1189.4652219458458	1279.6127062516346	1106.1769451576135	1173.1036215357456	1237.5070361725975	1.1518009833395852	0.8816926670865634	0.9857370123847234	0.9821423707884418	0.9434288058095729	0.9611785526688098	1.0340245904453707	0.8938752773308134	0.9479571325622188	1.0	10.273221012700763	-6.2464978401835864	24.734244435769938	0.9590779962616882	1.1518011423765857	0.6362555412690816	0.04375744744523498	1492.105473027173	2469988.3113994664	0.010563255549282597	0.23396197198951568	5.668943907732986e-07	6.2464978401835864	0.1927231461148975	
SQASMVINS(ph)DTDDEEEVSAALTLAHLK	ddPTM_K562_Methotrexat_30min_R1	2	SQASMVINSDTDDEEEVSAALTLAHLK	27	0	Q14676;Q14676-3;Q14676-2;Q14676-4	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	1	SQAS(0.002)MVINS(0.83)DT(0.167)DDEEEVSAALTLAHLK;SQAS(0.001)MVINS(0.499)DT(0.499)DDEEEVSAALTLAHLK	112.8	4.0104999999999994e-11	18463600.0	2943.6000000000004	2684.3	6362.0	3834.1000000000004	3356.8	2764.2	2490.7	3652.4	3182.4	4921.8	True	False	2814.202868567119	3127.8349497013974	5026.70314187412	3497.9704058242755	3798.2780377524386	3298.342528894009	3049.302877402357	3523.943021799971	3034.4509186177024	4030.4143267828804	0.6982415802430529	0.7760579176479031	1.2471926542317766	0.8678935023080847	0.9424038646627838	0.8183631412224512	0.7565730543232618	0.8743376576404789	0.752888083603016	1.0	11.97671244015719	-8.268873355917009	23.39051232569303	0.8273372744732446	0.9159173677532003	0.041186673383710404	0.14911297892275005	725.5211553636146	2282791.9646565616	0.053408093981011276	0.0481051849002214	5.38426769597886e-09	8.268873355917009	0.08858009327995575	
SQDADS(ph)PGSSGAPENLTFK	ddPTM_K562_Methotrexat_30min_R1	1	SQDADSPGSSGAPENLTFK	19	0	A8MQ02;J3KN01;P55196;P55196-5;P55196-3;H0Y8L4;H0Y948;H0Y8U8	A8MQ02	MLLT4	Afadin	1	S(0.001)QDADS(0.997)PGS(0.002)S(0.001)GAPENLTFK	159.18	1.6191999999999998e-14	22985000.0	1035.0	902.44	1611.1	1352.7	889.02	881.12	792.06	957.61	1211.4	1526.8	True	False	989.5026392740078	1051.5528711427667	1272.9521269841869	1234.1108912022364	1005.9417126795381	1051.3839697051915	969.6996174068786	923.9303135214855	1155.0822784104712	1250.2817250055064	0.7914237403331237	0.8410527404438671	1.018132234939754	0.9870662479664744	0.8045720356946814	0.8409176497405504	0.7755848925989924	0.7389777000199026	0.923857603697586	1.0	10.28803749752795	-7.785402929402451	24.994071263240496	0.8303604840500771	0.9123007547740402	0.08007620154609252	0.0928033879741357	458.2238702245361	477926.5524536434	0.029499984172737154	0.033467187619787196	1.6390683739442557e-08	7.785402929402451	0.08194027072396304	
SQDADSPGS(ph)SGAPENLTFKER	ddPTM_K562_Methotrexat_30min_R1	1	SQDADSPGSSGAPENLTFKER	21	1	A8MQ02;J3KN01;P55196;P55196-5;P55196-3;H0Y8L4;H0Y948;H0Y8U8	A8MQ02	MLLT4	Afadin	1	S(0.012)QDADS(0.226)PGS(0.553)S(0.209)GAPENLTFKER	69.07	0.006826100000000001	23257000.0	1165.0	971.64	2128.4	1769.5	1018.0	953.99	848.26	1112.1	1227.0	2030.0	True	False	1113.787994931613	1132.1869949438833	1681.6779263069595	1614.3706823259843	1151.8848434318354	1138.3350658923362	1038.5038980147447	1072.9868126557194	1169.9570378154601	1662.3473288978112	0.6700091945707216	0.6810772786542504	1.0116284948837768	0.9711392163732492	0.6929266967304429	0.6847757060776752	0.6247213683696929	0.6454648760840754	0.7037981879461849	1.0	10.699006133272293	-7.82552414654871	24.999929338730446	0.7005006039895069	0.8353067501917578	0.108968653684416	0.1412220736057367	113.68440015118851	44347.75643679906	0.04512939932217376	0.0511719485865182	1.4944309504681623e-08	7.82552414654871	0.13480614620225095	
SQDATFS(ph)PGSEQAEK	ddPTM_K562_Methotrexat_30min_R1	2	SQDATFSPGSEQAEK	15	0	C9J0I9;Q86WB0;Q86WB0-2	C9J0I9	ZC3HC1	Nuclear-interacting partner of ALK	1	SQDAT(0.197)FS(0.774)PGS(0.029)EQAEK;SQDAT(0.021)FS(0.756)PGS(0.222)EQAEK	208.85	3.775e-19	42976000.0	3075.99	3036.96	4630.7	3941.29	2970.55	2337.12	1934.8600000000001	3616.6800000000003	3516.96	4317.5	True	False	2940.7731626864306	3538.7660205063335	3658.779352259743	3595.763224947483	3361.2293925898216	2788.735363261981	2368.801608130536	3489.479314446262	3353.457297241613	3535.5589125696056	0.8317703750406774	1.0009071006921497	1.034851756889714	1.0170282305758898	0.950692514453653	0.788767895606966	0.6699935333304676	0.9869668136600633	0.9484942494719617	1.0	11.787722583616041	-8.05963043966449	8.250294928010026	0.8652273997641426	0.9785962534505953	0.14419973162876065	0.10515709857571569	0.5936760685355263	76.64885489605689	0.03644812190404625	0.03660835714511833	8.717050467256566e-09	8.05963043966449	0.11336885368645266	
SQDATFS(ph)PGSEQAEKS(ph)PGPIVSR	ddPTM_K562_Methotrexat_30min_R1	1	SQDATFSPGSEQAEKSPGPIVSR	23	1	C9J0I9;Q86WB0;Q86WB0-2	C9J0I9	ZC3HC1	Nuclear-interacting partner of ALK	2	S(0.006)QDAT(0.116)FS(0.877)PGS(0.005)EQAEKS(0.889)PGPIVS(0.107)R	75.26100000000001	0.0048401	24095000.0	2206.0	1670.2	3641.3	2367.4	1422.8	1755.3	1441.7	1965.6	1710.3	3006.1	True	False	2109.026881389817	1946.1721614541111	2877.0408913087444	2159.85371762562	1609.9231387375394	2094.4868826306542	1765.0379244192322	1896.4687338873148	1630.7885263046305	2461.6661602954237	0.8567477245317104	0.7905914265891163	1.1687372307882202	0.8773950556181089	0.6539973472862515	0.8508411564544949	0.7170094600509967	0.7704004565995741	0.6624734712642433	1.0	11.265419408164838	-7.533261621052259	24.136351193505707	0.7651730922285858	0.9404127297808786	0.2431846423216697	0.1301212307077906	177.060777370059	411597.67835990776	0.03727457193477487	0.048181463449367565	2.9291281929730657e-08	7.533261621052259	0.17523963755229288	
SQDATFSPGSEQAEKS(ph)PGPIVSR	ddPTM_K562_Methotrexat_30min_R1	3	SQDATFSPGSEQAEKSPGPIVSR	23	1	C9J0I9;Q86WB0;Q86WB0-2	C9J0I9	ZC3HC1	Nuclear-interacting partner of ALK	1	SQDATFSPGSEQAEKS(0.999)PGPIVS(0.001)R;SQDATFSPGSEQAEKS(0.982)PGPIVS(0.017)R;SQDATFSPGSEQAEKS(0.999)PGPIVS(0.001)R	106.18	7.5465e-06	843620000.0	5541.4	3770.79	7175.1	5451.7	3716.74	3899.26	3695.85	4165.9400000000005	4663.2	6613.6	True	False	5297.80669108501	4393.84895502907	5669.14456354307	4973.757925310293	4205.556456755247	4652.736809643029	4524.738442786165	4019.4215289227304	4446.408849829711	5415.812952905698	0.9782107944187077	0.8112999827055839	1.0467762850822708	0.9183769765611582	0.7765328111080494	0.8591021976020679	0.8354680049203966	0.7421640229960723	0.8210048774753417	1.0	12.402962197767154	-7.635945570384538	6.542862239184099	0.8273640909701168	0.939966130395891	0.24979282810550318	0.0838168794273123	0.27282999478469483	14.625633565755312	0.023813329558693405	0.030796919017957818	2.31235457668916e-08	7.635945570384538	0.11260203942577429	
SQDNDT(ph)LMRDILGHELAAMR	ddPTM_K562_Methotrexat_30min_R1	1	SQDNDTLMRDILGHELAAMR	20	1	E5RH05;E5RIF7;O00295	E5RH05	TULP2	Tubby-related protein 2	1	S(0.062)QDNDT(0.938)LMRDILGHELAAMR	50.055	0.025391	37455000.0	1411.9	1647.9	1491.4	1879.8	1557.3	1374.1	1574.2	1540.9	1553.9	1831.8	True	False	1349.8345665613244	1920.187465489301	1178.3755211869004	1715.0008525777814	1762.1122462440042	1639.625377669221	1927.254422293649	1486.7056736095662	1481.659528167435	1500.0432694950791	0.8998637532740535	1.2800880511504473	0.7855610202388006	1.1433009216827845	1.1747076114925261	1.093052054572483	1.284799219786754	0.9911085258960547	0.9877445259736859	1.0	10.550788401240329	-3.533682951038748	22.511382013420075	1.0742609679570052	0.19781829323740918	0.0	0.15348500090281678	0.0	0.0	0.03361432229284874	0.0	0.00029262878826705614	3.533682951038748	-0.876442674719596	
SQDSYPGS(ph)PSLS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	SQDSYPGSPSLSPR	14	0	A0A0D9SEU5;Q6VN20;R4GMX8;Q6VN20-2;Q6VN20-3	A0A0D9SEU5	RANBP10	Ran-binding protein 10	2	SQDSYPGS(1)PSLS(1)PR;S(0.002)QDS(0.022)YPGS(0.976)PSLS(1)PR	176.42	0.00013861	50255000.0	7188.6	6847.6	9099.8	7824.200000000001	6651.8	6916.2	6774.2	6972.700000000001	8043.599999999999	9301.2	True	False	6872.597751386598	7979.049510701215	7189.8763361248175	7138.264533854174	7526.628292278867	8252.657766564193	8293.486791704761	6727.466188836017	7669.654791664571	7616.662549529225	0.9023109146159277	1.0475781825458959	0.9439667688270126	0.9371905985641152	0.9881793033805965	1.0835005112671399	1.088860998865884	0.8832564322088593	1.0069574097304104	1.0	12.89494326427242	-7.999742596826074	24.94273481150037	1.0128624037058822	0.9631283830389108	0.14175480331871426	0.06295555270315085	20.880294300793476	2022846.7979027703	0.020523102329783768	0.023046227791423714	1.0005928683882014e-08	7.999742596826074	-0.04973402066697141	
SQDSYPGSPSLS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	SQDSYPGSPSLSPR	14	0	A0A0D9SEU5;Q6VN20;R4GMX8;Q6VN20-2;Q6VN20-3	A0A0D9SEU5	RANBP10	Ran-binding protein 10	1	SQDSYPGSPSLS(1)PR	211.12	6.473899999999999e-19	56552000.0	2380.2	2044.2	2352.3	2318.0	2084.6	1968.9	1874.0	2181.9	2018.5	2324.0	True	False	2275.569257971006	2381.969304541071	1858.5843760814992	2114.7845389271715	2358.7614387210265	2349.362059597502	2294.292203899313	2105.161340287307	1924.6603755749838	1903.101079979564	1.1957164450747102	1.2516252182288967	0.9766083344881803	1.1112308017553543	1.2394304556573292	1.2344914751573417	1.2055545698728465	1.1061742134631718	1.0113285078875849	1.0	10.894136474604284	-9.628619409135561	2.974001822257534	1.0013382139415643	1.1711079140812837	0.43085050699390004	0.07658079229271099	0.27908164243958944	4.6400559875777585	0.07047604160212942	0.022118739375733065	2.351692807268651e-10	9.628619409135561	0.16976970013971937	
SQDSYPVSPRPFSSPS(ph)MS(ph)PSHGMNIHNLASGK	ddPTM_K562_Methotrexat_30min_R1	1	SQDSYPVSPRPFSSPSMSPSHGMNIHNLASGK	32	1	Q96S59-2;Q96S59-3;Q96S59	Q96S59-2	RANBP9	Ran-binding protein 9	2	S(0.021)QDS(0.053)Y(0.084)PVS(0.224)PRPFS(0.204)S(0.204)PS(0.403)MS(0.403)PS(0.403)HGMNIHNLASGK	43.903	0.01126	14048000.0	2830.3	1419.0	2047.1	2080.7	1408.8	1537.9	1690.7	2559.5	2644.6	4332.8	True	False	2705.8834009055304	1653.4656311240483	1617.4416852767217	1898.288261495153	1594.0818933465323	1835.0774094443593	2069.8825128775716	2469.4809342615904	2521.6531232328966	3548.0879343095767	0.7626314372707532	0.46601596739901446	0.4558629084798768	0.5350172534166748	0.44927913931668806	0.5172017840086163	0.5833797107625379	0.6960033065646462	0.7107076177139859	1.0	11.79282604988739	-10.015890067404392	0.8634882172236212	0.995797102682815	0.519997360645812	0.7218512394383076	0.08787459695197773	0.330414765289145	0.5574958189837101	0.08372919295403436	0.029864348917987414	9.640730277321083e-11	10.015890067404392	-0.4757997420370029	
SQDVAVS(ph)PQQQQCSK	ddPTM_K562_Methotrexat_30min_R1	4	SQDVAVSPQQQQCSK	15	0	H3BTD6;H3BQ37;H3BPW9;Q96F86	H3BTD6	EDC3	Enhancer of mRNA-decapping protein 3	1	SQDVAVS(1)PQQQQCSK;SQDVAVS(1)PQQQQCSK;S(0.001)QDVAVS(0.999)PQQQQCSK;S(0.022)QDVAVS(0.978)PQQQQCSK	252.79	1.4729e-75	609200000.0	19235.9	13688.599999999999	25471.7	20770.2	13770.4	12634.6	12249.900000000001	16871.8	17920.9	23031.4	True	False	18390.312868416306	15950.40848358325	20125.538261376147	18949.308813815845	15581.44896659503	15076.057635324605	14997.251904240231	16278.409230972731	17087.761270568106	18860.190281170977	0.9750862846159207	0.8457183223388419	1.0670909445419767	1.0047252191688565	0.8261554488212524	0.7993587238817919	0.7951803073382934	0.8631094908530291	0.9060227397402044	1.0	14.203056611040557	-7.7639934396330235	24.999978590149595	0.8513564240964684	0.9707622623454671	0.3180135314579624	0.07602858417039218	75.56920514428847	739697.5963423729	0.023471483107436655	0.02785983785933084	1.7218945853902986e-08	7.7639934396330235	0.11940583824899875	
SQEDEIS(ph)SPVNKVR	ddPTM_K562_Methotrexat_30min_R1	2	SQEDEISSPVNKVR	14	1	Q5UIP0-2;Q5UIP0;H7C2B5	Q5UIP0-2	RIF1	Telomere-associated protein RIF1	1	SQEDEIS(0.774)S(0.226)PVNKVR;SQEDEIS(0.76)S(0.24)PVNKVR	204.67	1.7202e-12	30451000.0	5373.6	3655.2	8273.6	6392.5	4119.9	4030.7	3613.1000000000004	4825.4	5329.8	7419.0	True	False	5137.382978166961	4259.15967222313	6537.084425433784	5832.079449996523	4661.739063315145	4809.575729402026	4423.429648830637	4655.687946937244	5082.018761327497	6075.347208420128	0.8456114197138898	0.7010561744224507	1.0760017824781622	0.9599582130735759	0.7673205996941554	0.791654462601939	0.7280949544249891	0.7663245880802818	0.8364984892195252	1.0	12.568751146310849	-7.774539290816865	24.97823302696927	0.7977876578934523	0.8946386320676796	0.09881542125331666	0.11235582358800532	465.4358563055856	887465.7670207508	0.035616617051944605	0.04062417791061681	1.6805858754717337e-08	7.774539290816865	0.09685097417422728	
SQEDEISS(ph)PVNK	ddPTM_K562_Methotrexat_30min_R1	1	SQEDEISSPVNK	12	0	Q5UIP0-2;Q5UIP0;H7C2B5	Q5UIP0-2	RIF1	Telomere-associated protein RIF1	1	SQEDEIS(0.227)S(0.773)PVNK	139.19	4.6629e-06	15583000.0	1934.7	1530.5	3065.3	2145.4	1438.4	1435.5	1299.2	2080.1	1939.0	2668.6	True	False	1849.6529045443701	1783.389110948101	2421.935419803009	1957.3161129483844	1627.5748121732347	1712.8900586887166	1590.5786719882549	2006.9417039880962	1848.8563132226382	2185.290680737289	0.8464104665107165	0.8160878214821327	1.1082898221054414	0.895677691851965	0.7447864151528398	0.7838271008005258	0.7278567954408764	0.9183866117577455	0.8460459423177779	1.0	11.0936094800702														
SQESGYYDRMDYEDDRLR	ddPTM_K562_Methotrexat_30min_R1	1	SQESGYYDRMDYEDDRLR	18	2	D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991	D6REM6	MATR3	Matrin-3	0		58.246	0.028907	80611000.0	2472.3	2285.1	2752.1	3046.3	1982.9	2201.8	2278.4	2695.2	2545.4	3260.1	False	True	2363.620652248434	2662.6739349411996	2174.4718196717645	2779.2356086858676	2243.6861061306345	2627.266688415756	2789.3891981665925	2600.4082883460987	2427.0649095806602	2669.664298985101	0.885362497879223	0.9973815569071516	0.8145113303191008	1.041043104087065	0.840437543770426	0.9841187483439536	1.044846424783448	0.9740581575498722	0.9091273799868143	1.0	11.382442624088567	-8.444567175769517	24.9999857946455	0.9847970968297216	0.9206848944150087	0.18286396729187404	0.0700049231880338	200.2948619619022	63940.45731252509	0.0233716755302405	0.02061187344198734	3.592798198000355e-09	8.444567175769517	-0.06411220241471294	
SQGHSLELPEPSGS(ph)PTSDR	ddPTM_K562_Methotrexat_30min_R1	1	SQGHSLELPEPSGSPTSDR	19	0	Q9H5Z6	Q9H5Z6	FAM124B	Protein FAM124B	1	SQGHSLELPEPS(0.08)GS(0.625)PT(0.148)S(0.148)DR	91.37799999999999	0.0017527	8101300.0	1075.1	1148.3	1189.6	979.85	1051.5	838.36	894.17	1106.6	1055.7	1229.9	True	False	1027.839891288392	1338.0370572373104	939.9192168458738	893.9480718152668	1189.7906806174606	1000.361204877933	1094.7103841839107	1067.6802507731486	1006.6207374260639	1007.1531920253292	1.0205397743132432	1.3285337998548086	0.9332435465509953	0.8875989063963415	1.1813403264153466	0.993256252175761	1.086935327070263	1.060097172135356	0.9994713270995105	1.0	9.976067424378373	-6.777212395568129	24.99717157119301	1.022680601907486	1.174536908397382	0.26911937991788737	0.10310031771355685	274.05657570669655	434327.286578419	0.026310215884589844	0.05505698012789831	1.6702735524368534e-07	6.777212395568129	0.1518563064898959	
SQHHSSTSNQET(ph)SDSEMEMEAEHYPNGVLGSMSTR	ddPTM_K562_Methotrexat_30min_R1	1	SQHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTR	35	0	A0A0D9SEU5;Q6VN20	A0A0D9SEU5	RANBP10	Ran-binding protein 10	1	SQHHSST(0.001)S(0.001)NQET(0.423)S(0.423)DS(0.137)EMEMEAEHY(0.016)PNGVLGSMSTR	65.73100000000001	0.00051808	17043000.0	782.55	631.06	963.99	867.17	649.4	475.0	633.88	631.14	583.12	635.03	True	False	748.1500389989128	735.3319388140529	761.6616727028029	791.1465524682811	734.8074826371645	566.7870274309583	776.0437258312153	608.9424484664426	556.0108784767326	520.0199134334863	1.4386949800809998	1.4140457313623747	1.4646778960325797	1.521377416577478	1.4130372004131933	1.0899333136854072	1.4923346313938342	1.1709983266714459	1.0692107438840412	1.0	9.022423060070112	-9.333052049725504	0.5773887079832778	0.9828450597131865	1.4622558296831865	0.6515653534865801	0.11225020709337297	0.5005950514478276	0.36322186930665074	0.11224322055558057	0.06374984115979278	4.6445960690370346e-10	9.333052049725504	0.47941076997	
SQHHSSTSNQETS(ph)DSEMEMEAEHYPNGVLGSMSTR	ddPTM_K562_Methotrexat_30min_R1	1	SQHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTR	35	0	A0A0D9SEU5;Q6VN20	A0A0D9SEU5	RANBP10	Ran-binding protein 10	1	SQHHSS(0.001)T(0.002)S(0.002)NQET(0.22)S(0.662)DS(0.094)EMEMEAEHY(0.009)PNGVLGS(0.002)MS(0.002)T(0.005)R	50.972	0.033885000000000005	20089000.0	574.29	391.13	838.29	936.32	507.72	678.26	422.23	499.28	682.95	677.02	True	False	549.0448992354295	455.75758442674316	662.3443849106657	854.2342793305818	574.4940792801681	809.3241457375194	516.9258256416261	481.72003940540196	651.199803566478	554.4051175420672	0.9903315858078621	0.8220659766766334	1.194693851036482	1.5408123992754525	1.036235166491905	1.4598064125483285	0.9323972836567528	0.8688953694025922	1.1745919778907274	1.0	9.114796764382763														
SQIHDIVLVGGSTR	ddPTM_K562_Methotrexat_30min_R1	2	SQIHDIVLVGGSTR	14	0	E9PKE3;P11142-2;P11142;E9PN89;E9PNE6;A8K7Q2	E9PKE3	HSPA8	Heat shock cognate 71 kDa protein	0	;	110.35	0.0026962	24708000.0	4100.3	3177.5	4286.6	3758.8	3979.8999999999996	2970.3	3130.5	3712.9	3810.4	3923.1	False	True	3920.0557215605936	3702.5278667347834	3386.901239855015	3429.2718399134824	4503.3266094050705	3544.268437006684	3832.594313931059	3582.315202508246	3633.255335690323	3212.5885743837475	1.2202171646932896	1.1525060806907146	1.0542592558727208	1.0674481840773216	1.4017750811022909	1.1032438032269851	1.192992574427693	1.1150868278224582	1.130943241428688	1.0	11.649520516108703	-10.316542309288256	1.0637877754106604	1.0005672973628363	1.166685363579389	0.2225786569598639	0.09333133028653993	1.7667655568987455	3.5624399994470957	0.09142909439352921	0.02908748239358427	4.824559765536569e-11	10.316542309288256	0.16611806621655267	
SQLGAHHT(ph)TPVGDGAAGTR	ddPTM_K562_Methotrexat_30min_R1	1	SQLGAHHTTPVGDGAAGTR	19	0	E9PJ42;Q5BJD5-3;Q5BJD5-2;Q5BJD5	E9PJ42	TMEM41B	Transmembrane protein 41B	1	S(0.004)QLGAHHT(0.498)T(0.498)PVGDGAAGTR	72.899	0.032629000000000005	19781000.0	2744.5	2049.1	3051.2	2612.8	2496.8	2453.4	2489.3	2538.6	2519.4	3316.3	True	False	2623.855066171512	2387.6789462553097	2410.794817115107	2383.7398806337	2825.1729637334042	2927.484827577079	3047.5888917644397	2449.3159991078232	2402.2736439056807	2715.685934395967	0.9661850190180846	0.8792176282293064	0.8877296106227854	0.8777671417898699	1.0403165284875955	1.0779909379426165	1.122216988777937	0.9019143075734969	0.8845918496978199	1.0	11.407100928055957	-7.758585369024245	24.998103032718976	1.0091607076849476	0.8999746624286517	0.3260848112352316	0.07144992042887117	95.27616016120064	834511.9218195728	0.02380555673233586	0.029379752124400388	1.743470610733981e-08	7.758585369024245	-0.10918604525629594	
SQLQALHIGLDS(ph)SSIGS(ph)GPGDAEADDGFPESR	ddPTM_K562_Methotrexat_30min_R1	1	SQLQALHIGLDSSSIGSGPGDAEADDGFPESR	32	0	O75116;E9PF63;Q14DU5	O75116	ROCK2	Rho-associated protein kinase 2	2	SQLQALHIGLDS(0.352)S(0.352)S(0.352)IGS(0.945)GPGDAEADDGFPESR	86.145	8.975499999999999e-06	17352000.0	1394.7	1192.5	1269.3	1326.2	1047.1	1043.3	1194.2	1712.8	1790.1	1945.2	True	False	1333.3906579666266	1389.5403559657698	1002.8912760108175	1209.9341050583316	1184.8120034945725	1244.9029594078283	1462.0297491443766	1652.559853175717	1706.8786417224574	1592.905430626612	0.8370808664027855	0.8723307292757215	0.6295987550348819	0.7595768598656679	0.7438056150191509	0.7815297352072637	0.9178383857786511	1.0374500716754027	1.0715505195126436	1.0	10.63744490255109	-8.963472303384957	2.2736168769113743	1.042738727484893	0.7648414568304807	0.7889991342253961	0.0620435461734267	0.1429590215609334	1.479174772832371	0.035780710524633795	0.01997853066507888	1.0877465051611885e-09	8.963472303384957	-0.2778972706544123	
SQLQALHIGLDSS(ph)S(ph)IGSGPGDAEADDGFPESR	ddPTM_K562_Methotrexat_30min_R1	1	SQLQALHIGLDSSSIGSGPGDAEADDGFPESR	32	0	O75116;E9PF63;Q14DU5	O75116	ROCK2	Rho-associated protein kinase 2	2	SQLQALHIGLDS(0.333)S(0.555)S(0.555)IGS(0.555)GPGDAEADDGFPESR	73.27600000000001	7.9067e-06	17649000.0	865.55	760.55	963.02	740.61	857.27	715.83	707.52	1336.3	1186.2	1303.9	True	False	827.5014583803064	886.2179603603905	760.8952624469688	675.6818711712046	970.0160311677886	854.1540165176907	866.1993703857215	1289.30157157795	1131.0538209101046	1067.7510749506685	0.7749947321931173	0.8299855473349301	0.7126148409470093	0.6328084204480169	0.9084664524571934	0.7999561288731587	0.8112371794387948	1.2074926467646192	1.0592860521937295	1.0	10.060359635065666	-9.187129045671877	6.319752241784453	1.0990579990708216	0.7788021586226869	0.7409294221890323	0.08332377478704636	0.11229951046406321	7.713140317975001	0.04058982836878619	0.023133629776602535	6.499365403884097e-10	9.187129045671877	-0.3202558404481347	
SQNSQESTADES(ph)EDDMSSQASK	ddPTM_K562_Methotrexat_30min_R1	2	SQNSQESTADESEDDMSSQASK	22	0	Q9BXW9;Q9BXW9-1	Q9BXW9	FANCD2	Fanconi anemia group D2 protein	1	SQNSQESTADES(0.936)EDDMS(0.052)S(0.012)QASK;SQNSQESTADES(1)EDDMSSQASK	158.47	2.2639e-19	21786900.0	9033.6	6417.9	14274.5	8693.8	7141.9	6022.6	6005.5	7538.1	8061.4	10704.9	True	False	8636.493760527223	7478.348889352382	11278.477522584419	7931.628051995276	8081.185032716916	7186.3822134856655	7352.38624894201	7272.980750364247	7686.6272735497505	8766.138877398122	0.9852106932500049	0.8530949593593515	1.2865958069252017	0.904802919840287	0.9218636786091499	0.8197887706313245	0.8387257322489822	0.8296675254730782	0.8768543803667435	1.0	13.097725819576043	-7.49913274975513	24.989507314151336	0.8716158232036002	1.0349331765241416	0.294927017687582	0.11110076037309259	916.6706200629081	964674.6919936273	0.030975423264027458	0.04563749683023995	3.1685987769965233e-08	7.49913274975513	0.16331735332054143	
SQPAPPADPDGS(ph)PGGAARPIK	ddPTM_K562_Methotrexat_30min_R1	1	SQPAPPADPDGSPGGAARPIK	21	1	P12980	P12980	LYL1	Protein lyl-1	1	SQPAPPADPDGS(1)PGGAARPIK	105.24	5.7708000000000004e-05	53480000.0	3137.9	2299.4	4485.9	2987.2	2436.9	2128.5	2023.6	3156.1	2587.3	3411.5	True	False	2999.961673215369	2679.3367668827577	3544.3708934506635	2725.3168139271997	2757.3950638104525	2539.802500814306	2477.443812065448	3045.098174105492	2467.0169877261123	2793.6442918891057	1.0738524163313392	0.9590830066167617	1.2687266248395228	0.9755418117616893	0.9870243938414432	0.9091359655873912	0.8868143375512428	1.0900092695932844	0.8830819996979205	1.0	11.447932622160682	-7.487904076946524	24.927957544622743	0.959851024722655	1.0923614907894077	0.3299921828593134	0.09072031729552109	700.2622190565671	499107.1536031808	0.024890285051852385	0.03689760603511775	3.251591076697346e-08	7.487904076946524	0.13251046606675265	
SQPERDWVLNEFR	ddPTM_K562_Methotrexat_30min_R1	2	SQPERDWVLNEFR	13	1	A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2;A0A0U1RQJ0	A0A1X7SBZ2	DDX17	Probable ATP-dependent RNA helicase DDX17	0	;	131.08	0.0010316	29110000.0	3609.8	2903.3999999999996	3296.5	3786.2	3051.1	2478.1000000000004	3208.0	4451.0	4238.8	4864.1	False	True	3451.1175142524744	3383.137500638168	2604.6096993379483	3454.2697244547276	3452.3731294645113	2956.957753003489	3927.475661744394	4294.455807149183	4041.7391131965533	3983.1643559073136	0.8664260888793665	0.8493592526807829	0.6539046513295713	0.8672174722923	0.8667413194598407	0.7423639821987541	0.9860189815967977	1.0781517967693706	1.0147055838161358	1.0	11.959699295009516	-8.877821679999581	5.284443229203161	1.03394580640527	0.8085159541920197	0.7120322778835848	0.0663802746207695	0.11424081565382824	4.814085251608588	0.028869068205839933	0.019283693573116056	1.3248854174731159e-09	8.877821679999581	-0.2254298522132503	
SQPPGEDS(ph)DTDVDDDSRPPGRPAEVHLER	ddPTM_K562_Methotrexat_30min_R1	1	SQPPGEDSDTDVDDDSRPPGRPAEVHLER	29	2	Q14676;Q14676-3;Q14676-2;Q14676-4	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	1	S(0.232)QPPGEDS(0.535)DT(0.232)DVDDDS(0.001)RPPGRPAEVHLER	57.397	0.0015037000000000002	164290000.0	770.76	507.04	954.78	614.18	629.24	660.35	454.53	618.81	773.05	818.1	True	False	736.8783132819651	590.8197417936134	754.3847258407061	560.3357929759666	711.9960892741144	787.9532917137541	556.4699228593139	597.046101555153	737.1110742324702	669.9341624489158	1.0999264623083824	0.8819071707492823	1.1260580040926482	0.8364042683353883	1.0627851648458155	1.1761652650066752	0.8306337458970025	0.891201158293938	1.1002739008531706	1.0	9.387875511948812														
SQQQPT(ph)PVTPK	ddPTM_K562_Methotrexat_30min_R1	4	SQQQPTPVTPK	11	0	O95251;O95251-4;O95251-2	O95251	KAT7	Histone acetyltransferase KAT7	1	SQQQPT(0.968)PVT(0.032)PK;SQQQPT(0.967)PVT(0.033)PK;S(0.002)QQQPT(0.798)PVT(0.201)PK;S(0.004)QQQPT(0.982)PVT(0.014)PK	174.21	0.00012302	120701000.0	19569.5	14967.1	30287.8	21606.3	14655.8	13854.0	13283.9	17597.6	16976.1	23899.100000000002	True	False	18709.248211857663	17440.158877798953	23930.804687276788	19712.10922494485	16583.294585823467	16531.08942742842	16263.152725388522	16978.68243358536	16186.884816348027	19570.74140298605	0.9559805541655697	0.8911342967894912	1.22278477828262	1.0072234270050306	0.8473513723549193	0.8446838618441993	0.8309931846990292	0.8675543804893769	0.8270961474090235	1.0	14.256410790503983	-7.731253178811091	6.440384563460074	0.8596624383559442	1.025893893172487	0.38728991241628286	0.0916762551317552	0.17666857003996864	22.5031358649877	0.02779933866496672	0.035177753893963624	1.8567217343377406e-08	7.731253178811091	0.16623145481654278	
SQS(ph)AAVTPSSTTSSTR	ddPTM_K562_Methotrexat_30min_R1	1	SQSAAVTPSSTTSSTR	16	0	A0A087WX59;Q16186	A0A087WX59	ADRM1	Proteasomal ubiquitin receptor ADRM1	1	S(0.186)QS(0.736)AAVT(0.068)PS(0.007)S(0.002)T(0.001)TSSTR	151.11	2.9836999999999997e-10	8104700.0	2000.6	1624.5	2540.5	1955.4	1733.9	1605.1	1598.3	1994.3	1849.3	2271.9	True	False	1912.6560194508018	1892.9210132212922	2007.2837679866714	1783.9731179543542	1961.9382416762871	1915.2628583777496	1956.7594607749588	1924.1593386199997	1763.326446643953	1860.436894838886	1.0280682052461865	1.0174604784889623	1.0789313916291163	0.9589000964791372	1.054557801513709	1.0294694024242148	1.051774164554189	1.0342513330916456	0.9478023423076961	1.0	10.861425740405526	-9.74633399751399	24.877061872964557	0.9739011773564826	1.0317110750128016	0.34710623172041855	0.03169515010260073	203.88924394134145	335788.9642289449	0.020431149213641635	0.007655228805981743	1.7933539037344254e-10	9.74633399751399	0.05780989765631894	
SQS(ph)ASVES(ph)IPEVLEECTSPADHSDSASVHDMDYVNPR	ddPTM_K562_Methotrexat_30min_R1	1	SQSASVESIPEVLEECTSPADHSDSASVHDMDYVNPR	37	0	A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538	A0A669KB10	GBF1	Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1	2	S(0.193)QS(0.44)AS(0.346)VES(0.488)IPEVLEECT(0.381)S(0.142)PADHS(0.005)DS(0.003)AS(0.001)VHDMDYVNPR	49.95	0.0013603	6449400.0	842.73	649.62	847.2	855.6	776.88	642.62	797.88	761.69	738.51	955.47	True	False	805.6845982564101	756.9586633479943	669.3842976730205	780.5908764046967	879.0533370975681	766.797220142489	976.8249005587965	734.9009309699985	704.1768312934764	782.4251243063999	1.029727411898524	0.9674518875132224	0.8555250552139577	0.9976556889027187	1.1234983512023937	0.9800263262535637	1.248457993248526	0.9392603945603991	0.8999926119674536	1.0	9.61180888691851	-5.899890620579361	17.25003354159085	1.0052119715899532	2.3381774220667895	0.005187503406827165	0.10636333721731385	43775974.665173456	52035120.43877548	0.027640883108534055	2259358473.176151	1.259242518917736e-06	5.899890620579361	1.3329654504768362	
SQS(ph)DCGELGDFR	ddPTM_K562_Methotrexat_30min_R1	3	SQSDCGELGDFR	12	0	Q6JBY9;B7ZKW8;F6T4W9	Q6JBY9	RCSD1	CapZ-interacting protein	1	S(0.417)QS(0.583)DCGELGDFR;S(0.186)QS(0.814)DCGELGDFR;S(0.088)QS(0.912)DCGELGDFR	104.09	0.0045934	176160000.0	2555.87	2090.73	3167.4500000000003	2855.8799999999997	2407.31	2207.81	2368.39	2755.37	2421.7299999999996	2774.14	True	False	2443.517015112325	2436.187596166299	2502.645530765353	2605.509434439746	2723.913460159028	2634.4380358575672	2899.5617464210736	2658.462075341416	2309.1443008873935	2271.716364033782	1.075625924872718	1.0723995454434605	1.1016540490651399	1.1469343073328322	1.1990552620408563	1.15966855614832	1.2763748997574924	1.1702438374044668	1.0164756205687369	1.0	11.149567002538909	-7.135270054743237	2.7786630371811474	1.1550302579729204	1.0751571808096025	0.076326667037516	0.0775925520099301	0.5314975434581164	7.908461978716981	0.022202841670954605	0.0443402474149164	7.323689868867861e-08	7.135270054743237	-0.07987307716331782	
SQS(ph)GEDESMNQPGPIK	ddPTM_K562_Methotrexat_30min_R1	1	SQSGEDESMNQPGPIK	16	0	A0A0C4DG33;O43933-2;O43933	A0A0C4DG33	PEX1	Peroxisome biogenesis factor 1	1	S(0.005)QS(0.769)GEDES(0.226)MNQPGPIK	113.28	0.00080403	18602000.0	2948.4	2036.2	4017.1	3132.3	2318.6	2093.8	1630.8	2683.7	2875.6	3137.3	True	False	2818.791866314478	2372.647440517819	3173.965606919603	2857.69612220948	2623.536540256438	2498.3972169156655	1996.548413083778	2589.3127498643594	2741.913983652923	2569.1045689414323	1.0971884525027045	0.9235308944608039	1.2354365195136436	1.112331571379735	1.02118713732911	0.9724778224753612	0.777137854651993	1.007865846010018	1.067264453460022	1.0	11.327049897369864	-8.043531537362453	3.134992023460861	0.9545125268349707	1.0893247362246452	0.261910938337255	0.09952632145705162	0.36334510809528875	7.169477941262482	0.035670088520932286	0.0376262986075743	9.046247438011427e-09	8.043531537362453	0.13481220938967453	
SQS(ph)GTLDGESAAWSASGEDSR	ddPTM_K562_Methotrexat_30min_R1	1	SQSGTLDGESAAWSASGEDSR	21	0	P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4	P49815	TSC2	Tuberin	1	S(0.04)QS(0.611)GT(0.349)LDGES(0.001)AAWSASGEDSR	114.1	2.5259e-05	12357000.0	704.48	351.49	722.79	513.68	483.89	507.08	529.38	620.87	529.24	820.35	True	False	673.5119027205342	409.5677481915371	571.0862565097759	468.6464719396501	547.5300165896178	605.0660334098741	648.1069407151646	599.0336501875341	504.63574791642543	671.7766656459704	1.0025830564878213	0.6096784379935299	0.8501132678680167	0.6976224330284033	0.8150476856220082	0.9006952226124907	0.9647654851065043	0.8917154775114321	0.7511957079235183	1.0	9.39183787379384	-8.158395543784648	4.114150500186278	0.8988032988799168	0.779189792338894	0.18145137525591526	0.11270882770729843	0.3800007505740018	11.236612185281938	0.03650349454855133	0.036447959731307364	6.943915962281624e-09	8.158395543784648	-0.11961350654102287	
SQS(ph)LNIR	ddPTM_K562_Methotrexat_30min_R1	1	SQSLNIR	7	0	A0A0C4DGF9;O00443-2;O00443	A0A0C4DGF9	PIK3C2A	Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha	1	S(0.018)QS(0.982)LNIR	83.883	0.02837	15927000.0	1591.7	1047.8	1589.3	1250.4	1087.8	1276.7	1061.8	1316.4	1533.0	1548.4	True	False	1521.7307738477662	1220.9311404452264	1255.7276490695594	1140.7793733712401	1230.8647668812866	1523.4042061496941	1299.935678815523	1270.101465857378	1461.7311646056232	1267.9697556972283	1.2001317594606193	0.9629024154238314	0.9903451114881386	0.8996897349053495	0.9707366925360625	1.201451532502846	1.02521031986344	1.001681199532222	1.152812326980031	1.0	10.308304618604705														
SQS(ph)LPHSATVTLGGTSDPSTLSSSALSER	ddPTM_K562_Methotrexat_30min_R1	2	SQSLPHSATVTLGGTSDPSTLSSSALSER	29	0	F8WDP1;A0A0A0MRY0;Q8WUA7-3;Q8WUA7-4;Q8WUA7	F8WDP1	TBC1D22A	TBC1 domain family member 22A	1	S(0.174)QS(0.55)LPHS(0.143)AT(0.03)VT(0.103)LGGTSDPSTLSSSALSER;S(0.124)QS(0.86)LPHS(0.008)AT(0.008)VTLGGTSDPSTLSSSALSER	92.208	9.7836e-06	55317000.0	3241.7	2810.2	3966.7	3260.2	3371.5	2955.1000000000004	2874.8	3681.4	3282.0	3951.1	True	False	3099.198749501982	3274.537784767301	3134.1438781628535	2974.383327787043	3814.9113454129965	3526.1312521288933	3519.5470799198233	3551.923075362615	3129.420536357246	3235.5175030582004	0.9578680215985943	1.0120599816481348	0.968668497450708	0.9192913730108602	1.1790730051088134	1.0898198661561884	1.0877848988896395	1.0977913338454663	0.9672086562348459	1.0	11.659780766396203	-7.7428843951165325	24.999999942178682	1.077021499306474	0.968170864985726	0.4417651130616417	0.05791253244128373	226.64659264066216	305370.3166459832	0.0170355419112186	0.021953280134229473	1.8076552418698368e-08	7.7428843951165325	-0.10885063432074793	
SQS(ph)LPNSLDYTQTSDPGR	ddPTM_K562_Methotrexat_30min_R1	2	SQSLPNSLDYTQTSDPGR	18	0	H0YNE5;H0YLG5;Q96TC7	H0YNE5	RMDN3	Regulator of microtubule dynamics protein 3	1	S(0.114)QS(0.825)LPNS(0.061)LDYTQTSDPGR;S(0.005)QS(0.948)LPNS(0.047)LDYTQTSDPGR	297.29	7.718799999999996e-201	676640000.0	2551.8	2314.9	2640.7	2697.7	2248.1	1869.92	2122.02	2543.3	2572.1	2719.5	True	False	2439.625927439045	2697.3978784278083	2086.45315730069	2461.1968294494523	2543.764554537436	2231.2555754393634	2597.9370024111113	2453.850697443838	2452.5236324084317	2226.972197506207	1.0954900695082634	1.2112400331932254	0.9369013046669947	1.1051762712644249	1.1422524975327386	1.0019234088049922	1.1665781033639826	1.1018775628145212	1.1012816572900193	1.0	11.12086783166507	-12.943246639021103	2.438690794628587	0.9304455119293202	1.0957091742093208	0.13130568977914048	0.07396658080091022	28137260.33016902	14423782.421136394	11123684.102582099	0.017796594874998344	1.1396024151861294e-13	12.943246639021103	0.16526366228000056	
SQS(ph)LPTTLLSPVR	ddPTM_K562_Methotrexat_30min_R1	1	SQSLPTTLLSPVR	13	0	E7EUL7;E9PHV5;P28290-2;P28290-3;P28290	E7EUL7	SSFA2	Sperm-specific antigen 2	1	S(0.053)QS(0.638)LPT(0.154)T(0.154)LLSPVR	162.37	3.7650999999999996e-05	10705000.0	1833.6	1665.1	2213.0	1989.5	1605.3	1345.4	1702.5	1853.5	1887.2	2093.0	True	False	1752.9971394906472	1940.2294731392885	1748.5215424343635	1815.0836238980187	1816.4250875846014	1605.3795088539182	2084.3289632543124	1788.3113544261982	1799.4644839163298	1713.9374184153291	1.022789467489094	1.1320305235725492	1.020178171995924	1.059013943213987	1.0597966227168494	0.9366616841460983	1.2161056412324784	1.0433936123990069	1.0499009267094928	1.0	10.743098717455464														
SQS(ph)MDIDGVSCEK	ddPTM_K562_Methotrexat_30min_R1	2	SQSMDIDGVSCEK	13	0	O95155;O95155-4;O95155-2	O95155	UBE4B	Ubiquitin conjugation factor E4 B	1	S(0.033)QS(0.967)MDIDGVSCEK;S(0.139)QS(0.861)MDIDGVSCEK	88.561	0.012925	0.0	9674.9	7031.4	15167.9	10119.4	7142.0	6745.799999999999	5791.4	8539.1	8859.2	11881.2	True	False	9249.602980398164	8193.219336635393	11984.365071617805	9232.24791338206	8081.298184469717	8049.330378197385	7090.268873886063	8238.775012992044	8447.33772568437	9729.399548818066	0.9506859014256241	0.8421094534688639	1.2317682105134302	0.9489021256716299	0.830606055792152	0.8273203642022515	0.7287468089176576	0.8467917235440183	0.8682280631296059	1.0	13.248135056300248	-7.654053929193742	4.620927412800231	0.8356559286247183	1.0056511331744622	0.2911264036498258	0.11012552783261752	0.25226717422956885	9.118306709193082	0.03329117878476485	0.043218085056138014	2.2179209889061405e-08	7.654053929193742	0.16999520454974393	
SQS(ph)NPILGSPFFSHFDGQDSYAAAVR	ddPTM_K562_Methotrexat_30min_R1	2	SQSNPILGSPFFSHFDGQDSYAAAVR	26	0	Q9NYL2	Q9NYL2	ZAK	Mitogen-activated protein kinase kinase kinase MLT	1	S(0.194)QS(0.728)NPILGS(0.078)PFFSHFDGQDSYAAAVR;S(0.045)QS(0.887)NPILGS(0.068)PFFSHFDGQDSYAAAVR	145.59	1.2325e-22	85060000.0	4254.0	2896.16	4536.7	4124.2	3343.1	3403.61	3549.93	4775.3	5068.9	5325.2	True	False	4066.9992535957763	3374.701213697124	3584.5086676737387	3762.637789233579	3782.7762476198104	4061.3094619669127	4346.092168296846	4607.349992334192	4833.247945381243	4360.754677756958	0.9326365627354483	0.7738800879835253	0.8219927357889124	0.8628409684281914	0.8674590815472237	0.931331790500063	0.996637621112946	1.0565487702931446	1.1083512608572885	1.0	12.090362115912006	-8.654675311407862	1.324050051680323	1.0641915162298246	0.8406072187620882	0.8012756252528499	0.04488210303588902	0.1750899660855127	0.62480485023561	0.02580527826506827	0.01651388373395823	2.214749889007945e-09	8.654675311407862	-0.22358429746773634	
SQS(ph)PAASDCSSSSSSASLPSSGR	ddPTM_K562_Methotrexat_30min_R1	4	SQSPAASDCSSSSSSASLPSSGR	23	0	C9JFK9;O95817	C9JFK9;O95817	BAG3	BAG family molecular chaperone regulator 3	1	S(0.006)QS(0.984)PAAS(0.009)DCSSSSSSASLPSSGR;S(0.007)QS(0.992)PAAS(0.001)DCSSSSSSASLPSSGR;S(0.078)QS(0.865)PAAS(0.057)DCSSSSSSASLPSSGR;S(0.06)QS(0.94)PAASDCSSSSSSASLPSSGR	294.91	1.1609999999999997e-186	378270000.0	9023.300000000001	7852.589999999999	11983.170000000002	9848.890000000001	7863.639999999999	7546.860000000001	7393.209999999999	8977.300000000001	9796.779999999999	10863.34	True	False	8626.646536194354	9150.097026292027	9468.066376707275	8985.453105088196	8897.846493324472	9005.1838859739	9051.32554151038	8661.563270617926	9341.329836128552	8895.883858083129	0.9697346181465559	1.0285764936080983	1.0643199178128029	1.0100686169507127	1.0002206228490225	1.0122865844062765	1.0174734389417652	0.9736596620185985	1.050073268171175	1.0	13.118922237464819	-7.489874611594263	24.99013996087293	1.007947696014236	1.0242381725013476	0.031356300736543274	0.02789027992306128	1942.9622991955548	1471177.4613855209	0.007772467700004019	0.011516968489716603	3.236870975611446e-08	7.489874611594263	0.016290476487111683	
SQS(ph)PINCIRPSVLGPLK	ddPTM_K562_Methotrexat_30min_R1	1	SQSPINCIRPSVLGPLK	17	1	Q96E09	Q96E09	FAM122A	Protein FAM122A	1	S(0.045)QS(0.943)PINCIRPS(0.012)VLGPLK	65.598	0.032298	17037000.0	2492.9	1621.7	3745.7	2852.6	1741.7	1650.0	1487.0	2012.4	2350.7	2681.8	True	False	2383.3151009141784	1889.6583608131555	2959.528758019157	2602.516986947215	1970.764078394134	1968.839147918065	1820.4976025604483	1941.6227513608228	2241.4164700837823	2196.1000328266764	1.0852488799640565	0.860460968338	1.347629303666029	1.1850630426872792	0.8973926728909044	0.8965161506709255	0.8289684328346477	0.884123091998543	1.0206349604206224	1.0	11.100728055569903	-7.770944456244075	24.996229161403495	0.9096256444469938	1.1173783483941022	0.38009226202154134	0.12353285117794899	213.57953217403292	561664.6855197896	0.039932505969489454	0.04585951018909404	1.6945545103238684e-08	7.770944456244075	0.20775270394710843	
SQS(ph)SERGNDQESSQPVGPVIVQQPTEEK	ddPTM_K562_Methotrexat_30min_R1	4	SQSSERGNDQESSQPVGPVIVQQPTEEK	28	1	Q5JUL1;Q96GU1-2;Q96GU1	Q5JUL1	PAGE5	P antigen family member 5	1	S(0.175)QS(0.607)S(0.218)ERGNDQESSQPVGPVIVQQPTEEK;S(0.078)QS(0.845)S(0.078)ERGNDQESSQPVGPVIVQQPTEEK;S(0.109)QS(0.428)S(0.428)ERGNDQES(0.028)S(0.007)QPVGPVIVQQPTEEK;S(0.172)QS(0.413)S(0.392)ERGNDQES(0.011)S(0.011)QPVGPVIVQQPTEEK	127.28	1.5139000000000002e-15	374579000.0	8819.6	6924.200000000001	15004.400000000001	9660.1	6272.639999999999	6547.37	5622.110000000001	9252.1	8791.7	11368.1	True	False	8431.90094429086	8068.306358723842	11855.181487258105	8813.214031272804	7097.602106389256	7812.556589032914	6883.011281998064	8926.6983988598	8382.97578595125	9309.226930858726	0.905757374582882	0.8666999331575629	1.2734872159964123	0.9467181428415166	0.7624265859135674	0.8392272147900307	0.7393751740202925	0.958908668266438	0.900501819132039	1.0	13.184445651229794	-7.52675530091875	24.973629623856144	0.8567260776039576	1.01872823381842	0.22065513782897617	0.12515271126227903	155.63953201805035	1002656.0282212717	0.03757604339167323	0.04873006822730171	2.9733408603930766e-08	7.52675530091875	0.16200215621446246	
SQS(ph)SERGNDQESSQPVGPVIVQQPTEEKR	ddPTM_K562_Methotrexat_30min_R1	1	SQSSERGNDQESSQPVGPVIVQQPTEEKR	29	2	Q5JUL1;Q96GU1-2;Q96GU1	Q5JUL1	PAGE5	P antigen family member 5	1	S(0.137)QS(0.429)S(0.429)ERGNDQES(0.004)S(0.001)QPVGPVIVQQPTEEKR	123.54	4.0743e-15	57265000.0	1069.1	912.5	1797.1	1127.6	858.67	845.5	737.29	1067.8	1123.6	1285.2	True	False	1022.1036441041941	1063.275115152003	1419.9132688245804	1028.7450587119406	971.6001557068903	1008.880908827106	902.6460507006005	1030.2448687651977	1071.364081246496	1052.437826157373	0.9711772217804695	1.01029731992264	1.3491659398151072	0.9774877272019588	0.9231900750416445	0.95861331068905	0.8576716156205756	0.9789128090604597	1.017983252424731	1.0	10.039519291783805	-7.495310219743269	24.996640420087353	0.9502267236308031	1.1107393797595617	0.3170482297587449	0.10181964880341758	837.339341556468	759223.8651187752	0.029175777735506878	0.04314803133081755	3.196610931282026e-08	7.495310219743269	0.16051265612875865	
SQS(ph)VPASTGLGWGSGLVAPLQEGSIDSTLAGTQDTR	ddPTM_K562_Methotrexat_30min_R1	3	SQSVPASTGLGWGSGLVAPLQEGSIDSTLAGTQDTR	36	0	H0Y764;A0A494C1V1;Q6ZNJ1-2;Q6ZNJ1-3;Q6ZNJ1	H0Y764	NBEAL2	Neurobeachin-like protein 2	1	S(0.24)QS(0.725)VPAS(0.015)T(0.02)GLGWGSGLVAPLQEGSIDSTLAGTQDTR;S(0.289)QS(0.69)VPAS(0.01)T(0.01)GLGWGSGLVAPLQEGSIDSTLAGTQDTR;S(0.093)QS(0.903)VPAS(0.002)T(0.002)GLGWGSGLVAPLQEGSIDSTLAGTQDTR	100.5	2.6189e-13	47573800.0	5669.199999999999	4792.2	5664.5	5947.5	4769.1	4909.8	4178.5	5620.2	6095.5	7147.3	True	False	5419.9887561084115	5584.029596527595	4475.598859972639	5426.091909089453	5396.320242446727	5858.549362695827	5115.634991458524	5422.534380440317	5812.121535455693	5852.8547112469605	0.9260419100602745	0.9540694023716689	0.764686478783121	0.9270846752205498	0.9219979836637756	1.0009729698975653	0.8740410011593521	0.9264768472759572	0.9930404601171812	1.0	12.514924750932252	-7.506826181049001	24.466207407433064	0.9454618929262041	0.8816861664902927	0.2178288742070067	0.059352529323339905	912.3342456508108	1390517.348555959	0.016990595048549627	0.024404149048703336	3.112961997699353e-08	7.506826181049001	-0.06377572643591134	
SQSAAVTPS(ph)STTSSTR	ddPTM_K562_Methotrexat_30min_R1	1	SQSAAVTPSSTTSSTR	16	0	A0A087WX59;Q16186	A0A087WX59	ADRM1	Proteasomal ubiquitin receptor ADRM1	1	SQSAAVT(0.219)PS(0.596)S(0.176)T(0.006)T(0.002)S(0.002)STR	214.54	1.5361999999999996e-162	0.0	1742.9	1690.1	2191.6	2068.3	1738.9	1756.4	1652.0	1714.9	1888.4	2257.3	True	False	1666.2842028895343	1969.3602982119469	1731.61310998606	1886.9753502429119	1967.5958293159313	2095.7994420626014	2022.503052743686	1654.5859949854273	1800.6086961782523	1848.4810963157777	0.9014342674158901	1.0653937993399525	0.9367762069286788	1.0208248025927111	1.0644392486553214	1.133795442236199	1.0941432167062746	0.8951057158675821	0.9741017637491992	1.0	10.85212457439177	-3.019103146924077	23.848080366683536	1.0130144950778373	0.005059880176503606	0.0	0.07776084240152312	0.0	0.0	0.018647290177152553	0.0	0.0009569667603235224	3.019103146924077	-1.0079546149013336	
SQSAAVTPSS(ph)TTSSTR	ddPTM_K562_Methotrexat_30min_R1	1	SQSAAVTPSSTTSSTR	16	0	A0A087WX59;Q16186	A0A087WX59	ADRM1	Proteasomal ubiquitin receptor ADRM1	1	SQSAAVT(0.009)PS(0.09)S(0.562)T(0.165)T(0.049)S(0.091)S(0.027)T(0.008)R	118.23	0.00056895	3445000.0	1121.9	1093.9	1282.4	1274.4	1057.6	1170.4	922.83	1032.9	1161.9	1283.6	True	False	1072.5826193251294	1274.6483818792076	1013.2417650329095	1162.6753306336439	1196.692937537828	1396.5632355898822	1129.7981187430114	996.5723215467065	1107.8835226061803	1051.12760166169	1.0204114301912743	1.2126485688932167	0.9639569576815524	1.1061219673002707	1.1384849333668137	1.3286333965373045	1.0748439266145746	0.9480983279016372	1.0539952721770096	1.0	10.0377221005942	-9.00440919800128	24.99921053084307	1.0029222845723231	1.1306442214668049	0.26172304939638014	0.09599261032505121	259.87510145409954	1473438.3553085509	0.042089776823570305	0.027613299011212726	9.89898809612872e-10	9.00440919800128	0.12772193689448175	
SQSASVES(ph)IPEVLEECTSPADHSDSASVHDMDYVNPR	ddPTM_K562_Methotrexat_30min_R1	1	SQSASVESIPEVLEECTSPADHSDSASVHDMDYVNPR	37	0	A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538	A0A669KB10	GBF1	Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1	1	S(0.002)QS(0.004)AS(0.003)VES(0.297)IPEVLEECT(0.297)S(0.297)PADHS(0.045)DS(0.027)AS(0.027)VHDMDYVNPR	66.309	0.00048069	11059000.0	592.54	497.61	822.91	680.01	473.92	527.9	522.76	550.96	553.55	435.38	True	False	566.4926510873626	579.8315945762066	650.1924367305303	620.3945790836351	536.2487868361646	629.9092037490587	640.0022371987217	531.5824245128991	527.8155813225328	356.5284630815414	1.5889128351522397	1.6263262393263498	1.8236760989874325	1.7400983184384498	1.5040840840623697	1.7667851769943894	1.7950943710554383	1.4909957536583025	1.4804304171412435	1.0	8.47787344710984	-10.18031759762903	1.1896298751599979	1.003024657983735	1.6896042354372833	0.7997242089673813	0.10286788870442214	0.31365795034494004	0.8967891332832549	0.10089864551382317	0.03131536691101502	6.602104624425941e-11	10.18031759762903	0.6865795774535484	
SQSASVESIPEVLEECT(ph)SPADHSDSASVHDMDYVNPR	ddPTM_K562_Methotrexat_30min_R1	1	SQSASVESIPEVLEECTSPADHSDSASVHDMDYVNPR	37	0	A0A669KB10;A0A669KBG8;Q92538-3;Q92538-2;Q92538	A0A669KB10	GBF1	Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1	1	SQSASVES(0.001)IPEVLEECT(0.183)S(0.183)PADHS(0.183)DS(0.183)AS(0.183)VHDMDY(0.086)VNPR	51.263999999999996	0.00087055	14463000.0	1804.9	1304.6	2275.5	2030.2	1689.0	1589.1	1527.8	1722.9	1857.0	1823.1	True	False	1725.5587571262372	1520.1629755915658	1797.9036465473991	1852.2155180888453	1911.133104672269	1896.1710848221794	1870.448041151211	1662.3046304509828	1770.668475324621	1492.9189237998032	1.1558288461735853	1.0182488488540427	1.2042875322199973	1.240667184641584	1.280131877361444	1.2701098864739497	1.2528798525713065	1.1134594142728502	1.1860446318262783	1.0	10.543920103578609	-10.484167372070488	1.1679317936289402	1.0004562191351956	1.1980689699186529	0.36711816042722845	0.07577528968202271	2.3833471786593705	4.505126539486314	0.08201049313989935	0.025085714347795038	3.279688733436664e-11	10.484167372070488	0.1976127507834573	
SQSDLDDQHDYDSVAS(ph)DEDTDQEPLR	ddPTM_K562_Methotrexat_30min_R1	2	SQSDLDDQHDYDSVASDEDTDQEPLR	26	0	J3QRU8;A0A0C4DGN6;Q9Y2X7;Q9Y2X7-3;J3QLH1	J3QRU8	GIT1	ARF GTPase-activating protein GIT1	1	SQSDLDDQHDY(0.063)DS(0.013)VAS(0.894)DEDT(0.031)DQEPLR;SQSDLDDQHDYDS(0.024)VAS(0.952)DEDT(0.024)DQEPLR	151.02	1.7906e-23	109695000.0	4944.6	5145.3	6901.0	5580.4	5476.5	5248.7	4560.5	6112.6	5541.2	6406.4	True	False	4727.241304496868	5995.47336985381	5452.574407744937	5091.174996129932	6196.75574170378	6262.936991319729	5583.308215519111	5897.616393345339	5283.590821469457	5246.138880714749	0.9010896226698473	1.1428354273833043	1.0393499927706953	0.9704613453611614	1.1812031443703443	1.1938183745654953	1.0642699978919403	1.1241822848086385	1.0071389533533672	1.0	12.357040285148386	-6.249971595160033	24.223128255183312	1.0857207397918582	0.9010894526582736	0.34278420939574383	0.07413610610414266	1285.3800402207619	2715002.5019367207	0.018813902798274402	0.2753416172342215	5.623781060807048e-07	6.249971595160033	-0.18463128713358468	
SQSGEDES(ph)MNQPGPIK	ddPTM_K562_Methotrexat_30min_R1	1	SQSGEDESMNQPGPIK	16	0	A0A0C4DG33;O43933-2;O43933	A0A0C4DG33	PEX1	Peroxisome biogenesis factor 1	1	SQSGEDES(1)MNQPGPIK	138.25	2.4667e-06	17752000.0	4046.7	2539.6	5224.1	4742.5	3098.0	2600.2	2238.4	3466.8	3574.9	5059.0	True	False	3868.811913381766	2959.225734180854	4127.632801550548	4326.732388206259	3505.441301524387	3102.6518499494277	2740.418179940353	3344.8706789990533	3408.7036792880904	4142.766077287697	0.9338716792609031	0.714311568399798	0.9963470600427777	1.0444066373737921	0.846159603541851	0.7489324263224535	0.6614947908752133	0.8074003254340075	0.8228086297162587	1.0	12.016378645007025	-7.996595307120354	24.939442176969074	0.7881053039812445	0.9167522367881015	0.17400998717215233	0.11311365905621573	159.8301020122133	1170738.7986797437	0.03599318012983865	0.0406099084726319	1.007870405156572e-08	7.996595307120354	0.12864693280685702	
SQSLPNS(ph)LDYTQTSDPGR	ddPTM_K562_Methotrexat_30min_R1	1	SQSLPNSLDYTQTSDPGR	18	0	H0YNE5;H0YLG5;Q96TC7	H0YNE5	RMDN3	Regulator of microtubule dynamics protein 3	1	SQSLPNS(0.999)LDYT(0.001)QTSDPGR	328.58	0.0	332120000.0	1722.4	1304.0	1504.4	1702.2	1625.6	1148.0	1033.3	1634.2	1577.1	1679.4	True	False	1646.6853583435277	1519.463835789822	1188.646998842412	1552.9707688359933	1839.3948934015636	1369.8347526120842	1265.043828329328	1576.724259726623	1503.780965231265	1375.2443862812727	1.1973765352325811	1.104868233564309	0.8643169248314991	1.1292325817342919	1.3375040187405356	0.9960664201045631	0.9198683819027015	1.146504777954529	1.093464536363287	1.0	10.425472298606463														
SQSLPT(ph)TLLSPVR	ddPTM_K562_Methotrexat_30min_R1	1	SQSLPTTLLSPVR	13	0	E7EUL7;E9PHV5;P28290-2;P28290-3;P28290	E7EUL7	SSFA2	Sperm-specific antigen 2	1	SQS(0.008)LPT(0.496)T(0.496)LLSPVR	136.33	5.3091000000000004e-05	24037000.0	1897.5	1376.4	2110.7	2047.9	1505.5	1500.7	1547.8	1755.3	1808.4	2539.4	True	False	1814.0881720023467	1603.8267052002384	1667.6929144221474	1868.363786569867	1703.4996382972763	1790.6890359276606	1894.933550264332	1693.5651040864884	1724.3278787167708	2079.4900527108884	0.8723716517121323	0.7712596187269276	0.801972056681921	0.8984720961440568	0.8191910493039102	0.8611193083579612	0.9112491535095526	0.8144136596752188	0.8292070820290209	1.0	11.022014068497525	-15.999999999999998	0.30413618311472934	2.341144005631011	0.8339046236827484	0.5577559038722946	0.041928425829691654	216.98482652772827	1.9957106275310617	185.98567739367078	0.04267968371932676	1.000000000000004e-16	15.999999999999998	-1.5072393819482626	
SQSPAAS(ph)DCSSSSSSASLPSSGR	ddPTM_K562_Methotrexat_30min_R1	1	SQSPAASDCSSSSSSASLPSSGR	23	0	C9JFK9;O95817	C9JFK9;O95817	BAG3	BAG family molecular chaperone regulator 3	1	SQS(0.012)PAAS(0.893)DCS(0.028)S(0.028)S(0.028)S(0.008)S(0.002)S(0.001)ASLPSSGR	168.47	1.3324000000000001e-18	93768000.0	2068.4	1879.2	2704.4	2562.7	1864.1	1772.7	1674.0	2115.3	1990.1	2680.4	True	False	1977.4756126322306	2189.7058590615306	2136.783397812694	2338.032069848431	2109.261823812656	2115.2491863723376	2049.4371127681156	2040.9037000365468	1897.5806853761585	2194.9535863929536	0.9009191013837735	0.9976091852857596	0.97349821475002	1.0651851976927693	0.9609596471143985	0.9636874326114581	0.9337040771490889	0.9298163353833998	0.8645197315969315	1.0	11.099974718095307	-8.617717168803914	1.9500096288442843	0.9240811713755741	0.9848503058058194	0.17016037156041952	0.04860990905833754	0.5104787036028231	3.95294678157766	0.022831123625097316	0.01621514544632871	2.411475373629177e-09	8.617717168803914	0.06076913443024534	
SQSS(ph)DTEQQS(ph)PTSGGGK	ddPTM_K562_Methotrexat_30min_R1	3	SQSSDTEQQSPTSGGGK	17	0	E7EX17;P23588-2;P23588	E7EX17	EIF4B	Eukaryotic translation initiation factor 4B	2	S(0.001)QS(0.137)S(0.853)DT(0.01)EQQS(0.959)PT(0.037)S(0.003)GGGK;SQS(0.12)S(0.873)DT(0.008)EQQS(0.785)PT(0.201)S(0.013)GGGK;SQS(0.171)S(0.819)DT(0.027)EQQS(0.957)PT(0.023)S(0.003)GGGK	224.89	1.0745999999999997e-39	46454000.0	17016.6	12333.7	26029.6	20248.4	12500.400000000001	11577.800000000001	11586.4	16113.7	15500.2	19906.8	True	False	16268.570639101521	14371.6342879455	20566.342675530745	18473.254209669078	14144.421706125058	13815.045991979261	14184.945139412483	15546.972037667902	14779.599085205544	16301.485619164017	0.9979808600987997	0.8816150026872529	1.2616238271776263	1.1332251943928306	0.8676768508446178	0.8474715933705024	0.8701627244781095	0.9537150417377229	0.906641236908534	1.0	13.992715828529366	-7.767994835387196	24.99969161270094	0.9004175691724424	1.0690409680516242	0.3847735381636951	0.09948489300837293	169.13993395197437	645025.8988917207	0.032656268256992964	0.03789290778515312	1.7061026777880616e-08	7.767994835387196	0.16862339887918176	
SQSS(ph)DTEQQSPTSGGGK	ddPTM_K562_Methotrexat_30min_R1	4	SQSSDTEQQSPTSGGGK	17	0	E7EX17;P23588-2;P23588	E7EX17	EIF4B	Eukaryotic translation initiation factor 4B	1	S(0.002)QS(0.201)S(0.743)DT(0.054)EQQSPTSGGGK;SQS(0.003)S(0.995)DT(0.002)EQQSPTSGGGK;SQS(0.079)S(0.921)DTEQQSPTSGGGK;S(0.005)QS(0.079)S(0.908)DT(0.009)EQQSPTSGGGK	265.93	1.5886e-110	101629000.0	20154.600000000002	15474.599999999999	31198.5	24015.1	15355.599999999999	14629.699999999999	14519.300000000001	19431.3	19504.8	24678.7	True	False	19268.627916436642	18031.514626773915	24650.36120272866	21909.733468848095	17375.13055186826	17456.682474119352	17775.622623305935	18747.890165234305	18598.0261052836	20209.148288507597	0.9534606625354022	0.8922451539943401	1.2197624981922996	1.084149275172946	0.8597656023806324	0.8638009986816961	0.8795829675520991	0.9276932356370372	0.9202775812110697	1.0	14.302720900384418	-7.762097976649898	24.99941939335389	0.9012219119957244	1.0400614659572358	0.33629527398008907	0.08831406309136691	20.906806895121672	793606.2154855912	0.028534386335250732	0.0343406139270687	1.7294261573985385e-08	7.762097976649898	0.13883955396151137	
SQSS(ph)ERGNDQESSQPVGPVIVQQPTEEKR	ddPTM_K562_Methotrexat_30min_R1	2	SQSSERGNDQESSQPVGPVIVQQPTEEKR	29	2	Q5JUL1;Q96GU1-2;Q96GU1	Q5JUL1	PAGE5	P antigen family member 5	1	S(0.168)QS(0.22)S(0.522)ERGNDQES(0.045)S(0.045)QPVGPVIVQQPTEEKR;S(0.081)QS(0.209)S(0.549)ERGNDQES(0.081)S(0.081)QPVGPVIVQQPTEEKR	68.024	0.00017424	63829000.0	2029.12	1503.56	3420.3	2010.01	1778.6599999999999	1461.8400000000001	1501.9299999999998	1890.6	1985.75	2455.2	True	False	1939.9223143996858	1751.9977338498043	2702.4257711650503	1833.7955440418489	2012.5849662263931	1744.3198909045725	1838.7760351133916	1824.1065263977193	1893.43291592669	2010.539488625569	0.9648765047265209	0.8714067760228339	1.344129665919899	0.9120912841634637	1.0010173774812166	0.8675879786360289	0.914568475534098	0.9072721708364466	0.9417536569854021	1.0	10.973366956778877														
SQSSDT(ph)EQQSPT(ph)SGGGK	ddPTM_K562_Methotrexat_30min_R1	1	SQSSDTEQQSPTSGGGK	17	0	E7EX17;P23588-2;P23588	E7EX17	EIF4B	Eukaryotic translation initiation factor 4B	2	SQS(0.127)S(0.43)DT(0.442)EQQS(0.102)PT(0.826)S(0.072)GGGK	192.72	9.259700000000001e-11	15599000.0	4681.4	3455.9	7016.2	5354.2	3128.7	3081.5	3180.6	3979.0	3897.5	5033.1	True	False	4475.6112613500845	4026.9287347439013	5543.595502046087	4884.805598931776	3540.1788896318094	3676.956263217892	3893.9305142594208	3839.056314681331	3716.3060757015114	4121.55681826383	1.085903084367862	0.9770406941618265	1.3450246463862359	1.1851845829919818	0.8589421535921175	0.8921280053508465	0.9447717660967987	0.93145781653897	0.9016753230802174	1.0	12.0089736681256	-7.757875774076972	24.99811826351779	0.917764129880706	1.1501089144268737	0.5910240275859461	0.09238681823002395	67.70931662626087	474966.1941751424	0.02915310585738833	0.036155679350626434	1.746321600641178e-08	7.757875774076972	0.2323447845461677	
SQSSDTEQQS(ph)PTSGGGK	ddPTM_K562_Methotrexat_30min_R1	5	SQSSDTEQQSPTSGGGK	17	0	E7EX17;P23588-2;P23588	E7EX17	EIF4B	Eukaryotic translation initiation factor 4B	1	SQSSDTEQQS(0.983)PT(0.008)S(0.008)GGGK;SQSSDTEQQS(0.966)PT(0.034)SGGGK;SQSSDTEQQS(0.996)PT(0.003)S(0.001)GGGK;SQSSDT(0.003)EQQS(0.981)PT(0.012)S(0.003)GGGK;SQS(0.006)S(0.003)DT(0.001)EQQS(0.987)PT(0.003)SGGGK	267.69	1.0728999999999998e-110	74375300.0	14077.300000000001	10592.990000000002	21507.2	16580.6	11755.509999999998	10088.98	10183.41	13415.2	12943.8	16843.3	True	False	13458.478747683075	12343.301547456473	16993.13263327807	15127.004541042219	13301.565614745938	12038.532597916605	12467.298917881706	12943.37981219225	12342.04556322392	13792.815155085967	0.9757601038190084	0.8949080668934362	1.2320278668428335	1.0967307522760705	0.9643836638991797	0.8728118562132338	0.9038980641515021	0.9384146504290318	0.8948170061332918	1.0	13.75162932485534	-7.945968155984334	5.3797261071913	0.9169840308266918	1.0509208144596667	0.32642491900111137	0.08656279732421505	0.24152908296273864	14.9268878910773	0.029001204349266625	0.03276366442225916	1.1324833979009111e-08	7.945968155984334	0.1339367836329749	
SQSSEGVSSLSS(ph)SPSNSLETQSQSLSR	ddPTM_K562_Methotrexat_30min_R1	1	SQSSEGVSSLSSSPSNSLETQSQSLSR	27	0	O95155;O95155-4;O95155-2	O95155	UBE4B	Ubiquitin conjugation factor E4 B	1	SQSSEGVSSLS(0.012)S(0.59)S(0.393)PS(0.004)NSLETQSQSLSR	146.83	8.2775e-28	48744000.0	1888.7	1625.8	2053.8	2064.4	1715.0	1878.9	1457.4	1889.6	1741.0	1794.7	True	False	1805.6750094655251	1894.435816125071	1622.7354468376395	1883.4172571877714	1940.5525603984258	2241.9708333474255	1784.2590490730304	1823.1416969645247	1660.0612900054728	1469.662439001429	1.2286324815461718	1.2890278514651683	1.1041552153569474	1.281530511501315	1.3204069920416188	1.5255005325377615	1.214060454783995	1.2405173110386283	1.129552777529928	1.0	10.521269110810369	-11.76377315112446	7.83747652578275	1.0000019249816574	1.2639809191921212	0.3336534571412052	0.1097356065583805	1.4180739199020124e-10	0.0	0.11195033569301109	0.027151944640331747	1.7227682087550651e-12	11.76377315112446	0.2639789942104638	
SQSSEGVSSLSSS(ph)PSNSLETQSQSLSR	ddPTM_K562_Methotrexat_30min_R1	2	SQSSEGVSSLSSSPSNSLETQSQSLSR	27	0	O95155;O95155-4;O95155-2	O95155	UBE4B	Ubiquitin conjugation factor E4 B	1	SQSSEGVSSLS(0.001)S(0.203)S(0.795)PS(0.002)NSLETQSQSLSR;SQSSEGVSSLS(0.003)S(0.069)S(0.924)PS(0.003)NSLETQSQSLSR	162.38	1.7379e-35	73356000.0	4476.0	4306.5	5786.700000000001	4809.9	4283.1	3729.0	3711.2	4410.1	4553.799999999999	5278.8	True	False	4279.240399411068	5018.075927016002	4572.15074993445	4388.223534851511	4846.402723873177	4449.576474294826	4543.531071030484	4254.994283331523	4342.094831951135	4322.758167382154	0.9899328701060693	1.1608504877465606	1.0576929295823474	1.0151443511143725	1.1211366762180315	1.0293373586960273	1.0510722309922853	0.9843239243495157	1.0044732237659946	1.0	12.077736412943674	-8.989768973805608	1.6576532590207753	0.9948401860671872	1.0693032724811866	0.27662777321840204	0.04720486545976826	0.48152056095713	2.5890873950116706	0.02941526024706689	0.014605127333848483	1.0238374854440873e-09	8.989768973805608	0.07446308641399946	
SQSSERGNDQES(ph)SQPVGPVIVQQPTEEKR	ddPTM_K562_Methotrexat_30min_R1	1	SQSSERGNDQESSQPVGPVIVQQPTEEKR	29	2	Q5JUL1;Q96GU1-2;Q96GU1	Q5JUL1	PAGE5	P antigen family member 5	1	S(0.094)QS(0.175)S(0.117)ERGNDQES(0.307)S(0.307)QPVGPVIVQQPTEEKR	84.169	0.00042219999999999996	31289000.0	711.12	430.82	890.92	653.11	462.97	364.61	423.05	457.68	496.48	442.04	True	False	679.8600162710461	502.00568231209456	703.9280671421708	595.8528603186905	523.8586699053403	435.0657222560035	517.9297315152639	441.58313498450656	473.39875316594896	361.982272544822	1.878158318338264	1.38682394246236	1.9446479027643757	1.6460829866880007	1.4471942678918734	1.2018978697420382	1.4308151829483085	1.2199026540169258	1.3077954062165598	1.0	8.499775235321007	-7.90706885089263	2.5179791460633694	1.2585519805985572	1.713357964601081	0.6358509239102696	0.17152131358784306	0.1910218848705154	2.461260547229946	0.05566843155106998	0.06433945331697341	1.2386002094319362e-08	7.90706885089263	0.4548059840025238	
SQSSHS(ph)YDDSTLPLIDR	ddPTM_K562_Methotrexat_30min_R1	1	SQSSHSYDDSTLPLIDR	17	0	O60716;O60716-15;O60716-11;A0A669KB62;A0A669KB05;O60716-6;O60716-3;O60716-4;O60716-5;O60716-7;O60716-17;O60716-9;O60716-8;O60716-10;O60716-12;O60716-2;O60716-14;C9JZR2;O60716-13;O60716-18;O60716-22;O60716-19;O60716-21;O60716-23;O60716-24;O60716-16;O60716-20;O60716-29;O60716-26;O60716-32;O60716-31;O60716-25;O60716-27;O60716-30;O60716-28;H0YC95	O60716	CTNND1	Catenin delta-1	1	S(0.024)QS(0.017)S(0.143)HS(0.809)Y(0.001)DDS(0.005)T(0.002)LPLIDR	91.565	0.0040566000000000005	18068000.0	2028.3	1353.3	1875.4	1894.7	1611.3	1507.8	1313.6	1350.8	1962.8	1941.4	True	False	1939.1383606178438	1576.9098228331038	1481.779168857391	1728.5945927115233	1823.2141927521775	1799.161010442945	1608.2082385496992	1303.291598359272	1871.549856417429	1589.7936474493645	1.2197421745450812	0.9918959138898742	0.9320575479935588	1.087307522888174	1.1468244294958083	1.1316946783184634	1.0115830070964738	0.8197866436629992	1.1772281638061073	1.0	10.634623802925574	-9.367509817673396	0.011547682498313408	1.4632261639417913e-07	2.0634765727802233	0.04472444133495146	0.11426092162264787	2675.13293383568	31.269203605498557	2786.3004714434683	2795.278520559457	4.290324904085933e-10	9.367509817673396	2.063476426457607	
SQSSHSYDDS(ph)TLPLIDR	ddPTM_K562_Methotrexat_30min_R1	1	SQSSHSYDDSTLPLIDR	17	0	O60716;O60716-15;O60716-11;A0A669KB62;A0A669KB05;O60716-6;O60716-3;O60716-4;O60716-5;O60716-7;O60716-17;O60716-9;O60716-8;O60716-10;O60716-12;O60716-2;O60716-14;C9JZR2;O60716-13;O60716-18;O60716-22;O60716-19;O60716-21;O60716-23;O60716-24;O60716-16;O60716-20;O60716-29;O60716-26;O60716-32;O60716-31;O60716-25;O60716-27;O60716-30;O60716-28;H0YC95	O60716	CTNND1	Catenin delta-1	1	SQSS(0.001)HS(0.041)Y(0.15)DDS(0.404)T(0.404)LPLIDR	100.38	0.0016589000000000003	19040000.0	961.09	743.67	992.9	1040.8	858.2	1059.8	720.3	974.52	735.34	887.23	True	False	918.8416343766726	866.5488272713317	784.5038587813285	949.5546799462462	971.0683424687635	1264.591350887009	881.8456107090055	940.2455792368053	701.154203901565	726.5440495655198	1.2646743647906118	1.1926996412530473	1.0797746664506704	1.3069471569054745	1.3365581110319071	1.7405570269872095	1.213753813325369	1.294134305826441	0.9650539486502736	1.0	9.504906459295889	-9.757732048504034	20.792705043886215	0.9825260954576893	1.3052532340239167	0.3838982564211588	0.16270654398994927	11.939323215727166	66998.22548256995	0.13115521349748857	0.04478017952122581	1.7468996245838409e-10	9.757732048504034	0.32272713856622737	
SQSSSLLDMGNMS(ph)ASDLDVADRTK	ddPTM_K562_Methotrexat_30min_R1	1	SQSSSLLDMGNMSASDLDVADRTK	24	1	Q9NV70-2;Q9NV70	Q9NV70-2	EXOC1	Exocyst complex component 1	1	S(0.002)QS(0.002)S(0.002)S(0.005)LLDMGNMS(0.922)AS(0.068)DLDVADRTK	86.182	0.0017140999999999999	0.0	2393.7	1505.2	2855.5	2423.4	1548.7	1826.7	1398.6	2477.8	2576.2	3283.1	True	False	2288.4758141354523	1753.9087159745704	2256.16957271637	2210.9442845712274	1752.3811955038157	2179.683922122381	1712.271652280458	2390.654369569591	2456.4330243033323	2688.498776110544	0.8512095428386969	0.6523747496407468	0.8391930815681362	0.8223713189744518	0.6518065810835104	0.8107438773975317	0.63688764432231	0.8892153460557475	0.913682031820397	1.0	11.392585099515323	-9.459237309839365	5.884466887949378	0.9405745818405955	0.7526267967412467	0.5321793006360335	0.07963590508692824	0.16279851087136635	11.206633615620051	0.04363193028924439	0.020022669195855793	3.473463104888881e-10	9.459237309839365	-0.18794778509934884	
SQT(ph)PAPS(ph)SEVVLDSKR	ddPTM_K562_Methotrexat_30min_R1	1	SQTPAPSSEVVLDSKR	16	1	Q8NBJ4-2;Q8NBJ4	Q8NBJ4-2	GOLM1	Golgi membrane protein 1	2	S(0.418)QT(0.589)PAPS(0.654)S(0.339)EVVLDSKR	64.26	0.026331999999999998	11555000.0	1209.1	1268.1	1215.5	1322.1	1377.3	1064.2	1362.5	1391.5	1380.7	1627.0	True	False	1155.9494117354618	1477.6319709854856	960.3831607903157	1206.193545692671	1558.4390912167642	1269.8415886147914	1668.075308331277	1342.5601562902914	1316.5115583633294	1332.3345340476546	0.8676119864758501	1.1090547705735847	0.7208273419684286	0.9053233364958535	1.169705544209081	0.9530951545307403	1.2519943495449573	1.0076749659948925	0.9881238718355105	1.0	10.379740656872283	-7.732498383835569	23.20305967567078	1.0662272512287772	0.902737840259332	0.2944844257475582	0.12199558393299592	122.22523830259384	97991.03861569251	0.035298993680055055	0.04555839623131342	1.8514057839327083e-08	7.732498383835569	-0.16348941096944514	
SQT(ph)PPGVATPPIPK	ddPTM_K562_Methotrexat_30min_R1	1	SQTPPGVATPPIPK	14	0	Q15648	Q15648	MED1	Mediator of RNA polymerase II transcription subunit 1	1	S(0.027)QT(0.965)PPGVAT(0.008)PPIPK	100.41	0.009856	32607000.0	6703.3	4962.2	10080.0	7465.8	5867.9	5537.7	4597.1	6240.8	6045.0	8414.5	True	False	6408.630958304788	5782.119207021669	7964.345751350384	6811.284905402277	6639.63170213523	6607.782151167197	5628.116697196126	6021.307526680888	5763.969269433132	6890.552511827903	0.9300605353930794	0.8391372385736029	1.1558355788856225	0.9884961900675512	0.9635848055345405	0.9589625998531585	0.8167874328706215	0.8738497408364683	0.8365032063160469	1.0	12.7504039532398	-8.63072372212872	6.55309544290202	0.8716997427729264	0.9768799539638859	0.2087453597902621	0.08617760414943482	0.32035856811277025	17.464517800202653	0.03372033263639689	0.025972288110902773	2.340325571059047e-09	8.63072372212872	0.10518021119095955	
SQTEAVTFLANHDDSR	ddPTM_K562_Methotrexat_30min_R1	1	SQTEAVTFLANHDDSR	16	0	B4DEM9;Q9Y2S7	B4DEM9	POLDIP2	Polymerase delta-interacting protein 2	0		98.07700000000001	0.0041619	10150000.0	1681.9	1768.7	1860.4	2083.2	1634.0	1621.8	1374.1	1622.5	1782.9	2083.3	False	True	1607.9656898501967	2060.9476122403826	1469.9274638702623	1900.5690903766533	1848.8996406361673	1935.1898970263746	1682.2769036168875	1565.4357553582452	1700.0133681509237	1705.9941824102511	0.9425387884842852	1.208062508940475	0.8616251327384536	1.1140536761335869	1.083766673825357	1.134347301403052	0.9860976789734092	0.9176090818472644	0.9964942352553174	1.0	10.736397011610089	-8.976682190830847	22.799644230748854	0.9646016608651391	1.0592140621675241	0.15531418482072679	0.09409785516394804	139.4405040910945	136340.66439004405	0.037566945285402345	0.025324641538530004	1.055158760818079e-09	8.976682190830847	0.09461240130238502	
SQTTT(ph)ERDSDT(ph)DVEEEELPVENR	ddPTM_K562_Methotrexat_30min_R1	1	SQTTTERDSDTDVEEEELPVENR	23	1	Q14676;Q14676-3;Q14676-2;Q14676-4	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	2	S(0.012)QT(0.054)T(0.161)T(0.763)ERDS(0.03)DT(0.98)DVEEEELPVENR	97.61	1.7706e-05	121240000.0	2353.8	2106.2	2304.6	2612.4	2390.0	1968.0	2070.0	2243.0	2697.4	3053.1	True	False	2250.3297703605394	2454.2137507212606	1820.8959542224286	2383.37494801266	2704.3268917505766	2348.288147335002	2534.2501932078867	2164.112418655496	2571.998462757475	2500.1540048561133	0.9000764616858267	0.981625030279886	0.7283135161616667	0.9532912546120638	1.0816641240891134	0.9392573988537753	1.0136376352358885	0.8655916453354814	1.0287360129663279	1.0	11.287801249629068	-7.506192995746177	24.85063754440878	0.983641027770705	0.8744395642845968	0.30848029037313107	0.07887576136666374	870.743181589275	1296827.3371001496	0.022053766990384777	0.031777068805226856	3.117503891387033e-08	7.506192995746177	-0.10920146348610815	
SQTTTERDS(ph)DT(ph)DVEEEELPVENR	ddPTM_K562_Methotrexat_30min_R1	1	SQTTTERDSDTDVEEEELPVENR	23	1	Q14676;Q14676-3;Q14676-2;Q14676-4	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	2	S(0.027)QT(0.044)T(0.035)T(0.042)ERDS(0.888)DT(0.964)DVEEEELPVENR	73.29899999999999	0.0036501	113880000.0	1444.5	1315.5	1713.5	1628.6	1265.7	944.58	1060.4	1414.0	1248.1	1395.6	True	False	1381.001509595462	1532.8640153232457	1353.8597663629837	1485.8231665646208	1432.1617350998765	1127.1067165699678	1298.221693177606	1364.2688185371708	1190.076103420925	1142.8433163595007	1.2083909402337045	1.3412722403681252	1.1846416275816976	1.3001109997280065	1.2531566791342776	0.9862303085958787	1.1359577245576056	1.1937496584247573	1.041329188686935	1.0	10.158411908506768	-8.192436715090892	9.568876414978764	1.0876774508326919	1.260779683403759	0.6286115021620222	0.07094206656541928	0.35166471472571886	47.12037541501266	0.0229147260005355	0.02291502207193525	6.420417723051286e-09	8.192436715090892	0.17310223257106716	
SQTVPSPT(ph)INNSGQYSR	ddPTM_K562_Methotrexat_30min_R1	1	SQTVPSPTINNSGQYSR	17	0	Q9P2D1;Q9P2D1-4;Q9P2D1-2;Q9P2D1-3	Q9P2D1	CHD7	Chromodomain-helicase-DNA-binding protein 7	1	SQTVPS(0.232)PT(0.767)INNS(0.001)GQYSR	118.05	0.0010662	11494000.0	1295.8	1290.8	1760.0	1424.6	1354.1	1409.1	1373.9	1318.1	1523.2	1917.5	True	False	1238.8381835471096	1504.08276015146	1390.6000518230826	1299.7075298341886	1532.1878845688095	1681.3886323220277	1682.0320485257557	1271.741675893807	1452.386764466592	1570.2221690450997	0.7889572622073506	0.9578789484714376	0.885607195743994	0.8277220609008346	0.975777768760315	1.070796646148826	1.0712064074019862	0.809911935371026	0.9249562215452817	1.0	10.61675298359005	-7.778470971751433	24.144815956698782	0.9754931430514471	0.8731416215379642	0.3074453319260556	0.08080923523127452	237.09196753365973	336111.22313721804	0.027028116826151003	0.030732522469020255	1.6654401421046513e-08	7.778470971751433	-0.10235152151348292	
SRAEAALEEESR	ddPTM_K562_Methotrexat_30min_R1	1	SRAEAALEEESR	12	1	J3KT85;A0A2U3TZQ7;B4DGM3;A0A2R8Y855;A0A2R8YES3;A0A2R8Y4T4;A0A2R8YD78;A0A2R8Y7I9;A0A2R8Y7U4;J3QKS7;A0A2R8Y765;J3QR61;Q969G3-5;Q969G3-6;Q969G3-3;Q969G3-2;Q969G3-4;Q969G3	J3KT85	SMARCE1	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1	0		109.16	0.007516199999999999	3060400.0	488.89	562.5	1019.5	988.02	792.05	631.68	707.16	911.63	699.41	785.85	False	True	467.39898098035707	655.4435641347967	805.5208822918364	901.4018206000101	896.2184579962528	753.7432199738685	865.7586312216849	879.5674561831972	666.8945817591775	643.5249499578052	0.7263105820699004	1.0185208268580308	1.2517321703605322	1.4007255206796774	1.392670879435236	1.171272722251546	1.345338096492531	1.3667961999622065	1.036315036119275	1.0	9.329852273702608	-6.462950635087559	2.2302705677129677	1.2717349355857164	0.6925126735722816	0.5818955881478077	0.13648511107294015	0.2686205991359194	2.0854366847470622	0.035559096091840554	0.25864343447265903	3.443890741810586e-07	6.462950635087559	-0.5792222620134347	
SRDAT(ph)PPVSPINMEDQER	ddPTM_K562_Methotrexat_30min_R1	1	SRDATPPVSPINMEDQER	18	1	P17275	P17275	JUNB	Transcription factor jun-B	1	S(0.012)RDAT(0.981)PPVS(0.007)PINMEDQER	66.77	0.027797000000000002	13374000.0	458.85	437.98	337.89	566.57	432.81	438.33	359.51	478.19	430.97	397.9	True	False	438.679503411477	510.3487506129036	266.97150654005765	516.8996877566727	489.7321012629987	523.0310689132881	440.1392690628829	461.37178665932805	410.93429876717903	325.8364542701673	1.3463180612926322	1.566272723400519	0.8193420442719962	1.5863777087633215	1.5029997253067864	1.6051950666011634	1.3507981175671075	1.4159612302826672	1.2611673536885866	1.0	8.348004210006131	-10.10151410064925	2.5353732550592327	1.0002111750988907	1.4007589476426063	0.24526602925071317	0.21409607442144143	0.6179432473582829	8.55995057541256	0.2060570783321815	0.0558338095075393	7.915637537588006e-11	10.10151410064925	0.40054777254371565	
SRDESASETSTPSEHSAAPS(ph)PQVEVR	ddPTM_K562_Methotrexat_30min_R1	3	SRDESASETSTPSEHSAAPSPQVEVR	26	1	A0A0D9SFK2;Q92614-3;Q92614-4;Q92614	A0A0D9SFK2	MYO18A	Unconventional myosin-XVIIIa	1	SRDESASETSTPSEHSAAPS(1)PQVEVR;SRDESASETSTPSEHS(0.258)AAPS(0.741)PQVEVR;SRDESASETST(0.001)PS(0.001)EHS(0.004)AAPS(0.994)PQVEVR	154.26	6.131199999999999e-28	119930000.0	3758.3900000000003	4057.9400000000005	5549.679999999999	4803.55	3968.52	4059.3	4167.32	5108.51	5214.4	5943.0	True	False	3593.1756757691196	4728.445611813611	4384.878008864503	4382.4302294925	4490.449939937234	4843.7022746326065	5101.947591864295	4928.84080776897	4971.983682139307	4866.665111152557	0.7383240049813411	0.9715987239347538	0.9010026185726278	0.9004996500477558	0.9226954880554284	0.9952816074261349	1.048345730667302	1.0127758321553562	1.0216408091745208	1.0	12.248717786810397	-4.288504474575117	0.32772242917717515	1.028197965241784	1.3475288246010812e-11	0.6896110307518384	0.047974474657205335	15.576010294807066	0.4778712049968522	0.04683426515147948	8.246603277340274	5.146305047020253e-05	4.288504474575117	-1.0281979652283089	
SREFLGSNY(ph)SETFY(ph)S(ph)MKGEAFT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SREFLGSNYSETFYSMKGEAFTR	23	2	C9JK28;Q9H2U9-2;Q9H2U9	C9JK28	ADAM7	Disintegrin and metalloproteinase domain-containing protein 7	4	S(0.051)REFLGS(0.299)NY(0.426)S(0.351)ET(0.335)FY(0.764)S(0.777)MKGEAFT(0.998)R	44.743	0.019946000000000002	18942000.0	330.21	177.47	514.21	461.85	264.52	257.82	329.02	277.7	276.66	222.08	True	False	315.6943637822898	206.79390102578202	406.2843480954245	421.36032756838415	299.3090164878085	307.64006613105204	402.81111041993177	267.93313359814147	263.79813698616545	181.85916000080098	1.7359277573969845	1.137110173745833	2.234060401981594	2.316959605260072	1.6458286538136997	1.6916391020925043	2.214961899187028	1.4733001823881808	1.450562825567893	1.0	7.506677784003291	-9.879006555197718	1.6263937300038556	1.0242198223277612	1.8409430432514362	0.3744332751984001	0.34063233455189834	0.3978211365971935	2.2791364282212228	0.3381354264363553	0.099697453763449	1.3212756908321928e-10	9.879006555197718	0.816723220923675	
SRLDQELK	ddPTM_K562_Methotrexat_30min_R1	1	SRLDQELK	8	1	P46781;B5MCT8;C9JM19;F2Z3C0;A8MXK4	P46781	RPS9	40S ribosomal protein S9	0		119.75	0.017703999999999998	10947000.0	3043.2	2587.6	4509.3	3734.0	2305.1	2399.8	2705.8	3029.8	3118.8	4144.5	False	True	2909.4245718247903	3015.156918320356	3562.8595532305812	3406.6460174089984	2608.261053629395	2863.5273861659252	3312.6445279139625	2923.240216693011	2973.807668735824	3393.8908889738836	0.8572534200427498	0.8884071459445076	1.0497861215296123	1.0037582611970686	0.768516472377809	0.843729948852802	0.976060997917206	0.86132415929754	0.876223710784919	1.0	11.728724468733404	-6.526784023548594	24.984656200752653	0.9176593943408391	0.8650417936606936	0.05811330936481185	0.08229314490098968	340.65851438120455	2179431.892044595	0.02237199545765527	0.05976508964224148	2.973144221134548e-07	6.526784023548594	-0.05261760068014554	
SRLNRS(ph)S(ph)VS(ph)K	ddPTM_K562_Methotrexat_30min_R1	2	SRLNRSSVSK	10	2	O60673-2;O60673	O60673-2	REV3L	DNA polymerase zeta catalytic subunit	3	SRLNRS(1)S(1)VS(1)K;SRLNRS(1)S(1)VS(1)K	92.85600000000001	0.014063999999999998	39478000.0	385.27	513.72	590.9200000000001	529.71	269.65700000000004	257.35	268.81	428.85	491.67999999999995	485.93999999999994	True	False	368.3339921092723	598.6034982530274	466.89396739959966	483.271146727831	305.12162202878045	307.079245282857	329.097485234885	413.767102425506	468.8219041182599	397.9315571451245	0.9256214680529645	1.5042875778628395	1.1733021898268923	1.2144579590393818	0.7667691002387717	0.7716885976219928	0.8270203237861433	1.0397946455767173	1.178147085096048	1.0	8.636376503311281	-7.739919760130772	23.93316318918262	0.9194381924955033	1.2236143981620906	0.36312356671428836	0.1765722026204316	152.90366503561447	170051.22645554913	0.05341908428307698	0.06888483218485443	1.8200370960120706e-08	7.739919760130772	0.3041762056665873	
SRLS(ph)AIEIDIPVVSHTT	ddPTM_K562_Methotrexat_30min_R1	6	SRLSAIEIDIPVVSHTT	17	1	P56749	P56749	CLDN12	Claudin-12	1	S(0.365)RLS(0.635)AIEIDIPVVSHTT;S(0.033)RLS(0.945)AIEIDIPVVS(0.021)HTT;S(0.3)RLS(0.7)AIEIDIPVVSHTT;S(0.07)RLS(0.93)AIEIDIPVVSHTT;S(0.342)RLS(0.658)AIEIDIPVVSHTT;S(0.09)RLS(0.91)AIEIDIPVVSHTT	200.73	4.4167e-16	209387000.0	16048.2	14209.5	15631.0	19365.1	12650.8	12575.5	13921.300000000001	15334.399999999998	18393.4	17723.399999999998	True	False	15342.740343572099	16557.378354797147	12350.266710253756	17667.39174925736	14314.601942325602	15005.53739675372	17043.505900823657	14795.080460379346	17538.294848699985	14513.520516742601	1.0571342994191466	1.140824401336449	0.8509490647707877	1.2173057342549312	0.9862942575381674	1.0339005880374466	1.1743192067811872	1.0193998377796718	1.20841079381588	1.0	13.825109893164347														
SRLT(ph)PVSPESSSTEEK	ddPTM_K562_Methotrexat_30min_R1	3	SRLTPVSPESSSTEEK	16	1	Q13501;E7EMC7;Q13501-2	Q13501	SQSTM1	Sequestosome-1	1	SRLT(1)PVSPESSSTEEK;SRLT(0.944)PVS(0.056)PESSSTEEK;S(0.336)RLT(0.664)PVSPESSSTEEK	201.04	2.2213e-14	133273000.0	8043.900000000001	6159.2	12004.599999999999	8937.099999999999	5882.2	5509.0	5501.8	7266.6	7947.1	9558.0	True	False	7690.299787493899	7176.90311150052	9484.998512565558	8153.598318742893	6655.812402784617	6573.5362823518935	6735.71870192809	7011.029559251911	7577.641055601662	7826.953581086351	0.9825406153011215	0.9169471924355521	1.2118378388605542	1.0417333173465946	0.8503707520213524	0.8398588562268581	0.8605798708458928	0.8957545853081204	0.9681469267829635	1.0	12.934235173446222	-7.751429676877083	24.908908071658225	0.8920163159878158	1.0419973260608035	0.3804595512607091	0.08422104131285944	201.01147885181445	500209.7452038642	0.02589036318885769	0.03302420210386793	1.77243502339602e-08	7.751429676877083	0.1499810100729877	
SRLTPVS(ph)PESSSTEEK	ddPTM_K562_Methotrexat_30min_R1	2	SRLTPVSPESSSTEEK	16	1	Q13501;E7EMC7;Q13501-2	Q13501	SQSTM1	Sequestosome-1	1	S(0.001)RLT(0.006)PVS(0.989)PES(0.003)S(0.001)STEEK;SRLTPVS(0.473)PES(0.383)S(0.11)S(0.031)T(0.003)EEK	130.27	0.00020568	51620000.0	2802.0	2683.6	4558.8	3526.7	2895.8	2413.1	2017.5900000000001	3826.6000000000004	3867.7	4843.4	True	False	2678.827435020066	3127.0192865993604	3601.9701796881045	3217.5196865549838	3276.6484573771195	2879.3974229339915	2470.0859165769552	3692.016309062472	3687.891471197108	3966.2133264944155	0.6754118385729341	0.7884142957492438	0.9081635008452126	0.8112321304206869	0.8261402470434499	0.7259814805470842	0.6227819114208286	0.9308668004314594	0.9298268064811064	1.0	11.953546561018237	-9.441097024960191	10.228630640958233	0.9534738650153884	0.7743873696739381	0.5532156723205464	0.07744530542990019	0.4488193576017948	54.16816314877212	0.04564958443176902	0.021872620247908373	3.621620793900094e-10	9.441097024960191	-0.17908649534145038	
SRNSRS(ph)LY(ph)LET(ph)RK	ddPTM_K562_Methotrexat_30min_R1	1	SRNSRSLYLETRK	13	3	Q9P0U3;Q9P0U3-2;F8VRZ8	Q9P0U3	SENP1	Sentrin-specific protease 1	3	S(0.001)RNS(0.164)RS(0.839)LY(0.998)LET(0.998)RK	56.46	0.032473	0.0	812.97	713.58	738.41	789.17	637.0	536.21	638.81	838.75	627.02	672.9	True	False	777.2328122227924	831.4869662138815	583.427831969706	719.9846913654682	720.7766652908438	639.8249936394824	782.0794038275991	809.2506870919748	597.86997705872	551.0312894656834	1.4105057681505693	1.5089650662490448	1.058792564276044	1.306613081924283	1.3080503395546863	1.1611409476581618	1.4193012607069109	1.4686111343634918	1.0850018655718345	1.0	9.105990432119821	-9.920580872793892	6.019994318193097	1.0017201747890037	1.322243737933346	0.4433990815325761	0.13026806387103176	0.17706106015382772	9.487705752226056	0.12913346317742308	0.033531154740079075	1.200657469976708e-10	9.920580872793892	0.3205235631443424	
SRPEAVSHPLNTVTEDMYTNGSPAPGS(ph)PAQVK	ddPTM_K562_Methotrexat_30min_R1	2	SRPEAVSHPLNTVTEDMYTNGSPAPGSPAQVK	32	1	A6NFY0;Q00013-3;Q00013	A6NFY0	MPP1	55 kDa erythrocyte membrane protein	1	SRPEAVSHPLNTVTEDMY(0.004)T(0.024)NGS(0.024)PAPGS(0.947)PAQVK;SRPEAVSHPLNTVTEDMYT(0.001)NGS(0.002)PAPGS(0.997)PAQVK	92.90100000000001	1.5665e-07	219501000.0	5589.2	4066.1	7576.0	5684.9	4051.0	3954.6	3530.6000000000004	5336.0	5193.3	7443.5	True	False	5343.5054603191165	4737.9539131173315	5985.901132165722	5186.5136433766465	4583.777505640827	4718.770481428353	4322.4269237390145	5148.329855526408	4951.864616533843	6095.410021010275	0.876644137457625	0.7772986389407888	0.9820342046774397	0.850888393971734	0.7520047855420718	0.7741514459508414	0.7091281651012872	0.8446240429734218	0.8123923738461	1.0	12.573507554790968	-5.8064785265016035	7.896139333901948	0.8256888241194933	2.5957200407241374	0.013572087444218672	0.0894496696430632	45343.83334473391	38283.00129691947	0.022404581058006908	1387914.9860794274	1.5614262400902237e-06	5.8064785265016035	1.7700312166046441	
SRPLATGPSS(ph)QSHQEK	ddPTM_K562_Methotrexat_30min_R1	1	SRPLATGPSSQSHQEK	16	1	Q96RL1-2;Q96RL1-3;Q96RL1;D6RC40;D6RCQ3	Q96RL1-2	UIMC1	BRCA1-A complex subunit RAP80	1	SRPLAT(0.009)GPS(0.085)S(0.905)QS(0.001)HQEK	80.382	0.016132	6910900.0	2348.9	1781.2	2849.8	3251.7	1936.7	1960.4	1871.1	2571.8	2604.5	3759.2	True	False	2245.645168493445	2075.5130247767106	2251.665924821261	2966.62850958994	2191.4099963403105	2339.219554896107	2290.741805077912	2481.3483362898846	2483.41736348033	3078.372452607218	0.7294910551163174	0.6742241417275098	0.731446879637394	0.9637003173795178	0.7118729231364784	0.7598884121104035	0.7441405613988572	0.8060585177691265	0.8067306350071473	1.0	11.587952078713508	-15.999999999997325	0.19758706686454927	2.0372776592716777	0.7314500236902944	0.4918512408616177	0.07281540312113174	127.50660921181803	1.2584215634699645	52.07789985929435	0.18984376064721845	1.0000000000061599e-16	15.999999999997325	-1.3058276355813834	
SRPT(ph)SEGS(ph)DIESTEPQKQCSK	ddPTM_K562_Methotrexat_30min_R1	1	SRPTSEGSDIESTEPQKQCSK	21	2	H0YA82;Q4G0J3;Q4G0J3-3;D6RFF0	H0YA82	LARP7	La-related protein 7	2	S(0.064)RPT(0.584)S(0.579)EGS(0.77)DIES(0.002)TEPQKQCSK	73.722	0.02412	48098000.0	5464.0	3663.0	9666.8	6309.6	3504.3	2521.3	2891.7	4199.1	4124.9	6633.2	True	False	5223.809102408865	4268.248489645797	7637.870784638277	5756.4471642859735	3965.176873121987	3008.505541603526	3540.2373351204064	4051.415272927464	3933.1342993357716	5431.863202977814	0.9616974705005659	0.785779819953104	1.4061235526791438	1.0597555478072826	0.7299846709961747	0.5538625383559415	0.6517537726612123	0.7458610648932448	0.7240856686485734	1.0	12.407231431610228	-7.771028954988759	6.745655308814637	0.7073006891404381	1.0603493585930925	0.4294623004670004	0.17859578044344465	0.13245804125792895	27.464746958015855	0.05576173642886216	0.06651675828429837	1.694224840465994e-08	7.771028954988759	0.35304866945265445	
SRPTPQDYEMRVS(ph)PSDTTPLVSR	ddPTM_K562_Methotrexat_30min_R1	2	SRPTPQDYEMRVSPSDTTPLVSR	23	2	H0YJG4;Q9HCK8-2;Q9HCK8	H0YJG4	CHD8	Chromodomain-helicase-DNA-binding protein 8	1	S(0.002)RPT(0.006)PQDY(0.017)EMRVS(0.874)PS(0.084)DT(0.013)T(0.004)PLVSR;S(0.002)RPT(0.007)PQDY(0.055)EMRVS(0.752)PS(0.066)DT(0.024)T(0.095)PLVSR	70.12100000000001	0.01188	69696000.0	2715.42	2205.63	2989.5299999999997	2694.6	2128.31	2663.1	2233.81	2846.01	2520.75	3057.6	True	False	2596.0533881521023	2570.0728682002336	2362.0685073446934	2458.3686016363913	2408.220069866807	3177.706384739759	2734.7987555988943	2745.914215166175	2403.560882700343	2503.8390112502216	1.0368291956821283	1.026452921554625	0.9433787462897868	0.9818397231573104	0.9618110665447017	1.2691336665263717	1.0922422501250788	1.0966816168404852	0.9599502491576695	1.0	11.28992608928985														
SRPTS(ph)EGS(ph)DIESTEPQK	ddPTM_K562_Methotrexat_30min_R1	1	SRPTSEGSDIESTEPQK	17	1	H0YA82;Q4G0J3;Q4G0J3-3;D6RFF0	H0YA82	LARP7	La-related protein 7	2	S(0.026)RPT(0.428)S(0.544)EGS(0.92)DIES(0.068)T(0.015)EPQK	132.5	0.00059193	34496000.0	5843.1	4478.8	8899.8	6519.8	4215.0	3932.4	3640.8	5046.8	5794.3	6270.9	True	False	5586.244320330391	5218.845573416758	7031.853602963108	5948.219256642521	4769.346380221204	4692.280645619999	4457.342078952305	4869.3011834465315	5524.924257713218	5135.179243736596	1.087838234107205	1.0162927768845091	1.369349202667053	1.1583274846535483	0.9287594753461429	0.9137520664625675	0.8680012648806656	0.9482241908859643	1.0758970613249763	1.0	12.326198919440557	-7.757724089877369	24.45751362024679	0.9466939681358612	1.1629332814529652	0.5015479809405459	0.0984419248050787	61.16150157014488	402617.9086613222	0.0309734484486372	0.03842115184134566	1.7469316375379555e-08	7.757724089877369	0.216239313317104	
SRPTS(ph)EGSDIES(ph)TEPQK	ddPTM_K562_Methotrexat_30min_R1	1	SRPTSEGSDIESTEPQK	17	1	H0YA82;Q4G0J3;Q4G0J3-3;D6RFF0	H0YA82	LARP7	La-related protein 7	2	S(0.004)RPT(0.032)S(0.964)EGS(0.001)DIES(0.826)T(0.173)EPQK	142.23	9.823200000000001e-06	27474000.0	7771.5	6007.5	10675.0	8058.3	5696.7	5181.5	5094.2	6566.6	6937.9	8653.4	True	False	7429.874165331352	7000.13726495963	8434.463382506483	7351.841350317866	6445.915901353767	6182.751542386335	6236.70402620271	6335.648956015687	6615.358543325081	7086.185406839565	1.0485012370915472	0.9878569163887694	1.1902685151824512	1.0374892735973138	0.9096453918820961	0.8725077298173375	0.8801214854162667	0.8940845592186365	0.9335570781057968	1.0	12.790793498076066	-7.710685561317859	4.389900571549823	0.9051439189089936	1.07315514709943	0.6218703472050147	0.057841687159850934	0.1299259998944774	5.2200671720078	0.01754706298283832	0.0223440088050206	1.9467690747830625e-08	7.710685561317859	0.16801122819043646	
SRPTSEGS(ph)DIESTEPQK	ddPTM_K562_Methotrexat_30min_R1	4	SRPTSEGSDIESTEPQK	17	1	H0YA82;Q4G0J3;Q4G0J3-3;D6RFF0	H0YA82	LARP7	La-related protein 7	1	SRPTS(0.002)EGS(0.98)DIES(0.014)T(0.004)EPQK;SRPT(0.003)S(0.003)EGS(0.993)DIESTEPQK;SRPT(0.001)S(0.003)EGS(0.996)DIESTEPQK;S(0.028)RPT(0.071)S(0.071)EGS(0.82)DIES(0.009)TEPQK	219.95	3.2345999999999994e-30	148209000.0	13597.099999999999	10438.619999999999	18901.3	12898.400000000001	9986.4	9231.83	8369.48	12367.2	12531.0	14561.099999999999	True	False	12999.387764707833	12163.424528797821	14934.17543154752	11767.617298057907	11299.786640911281	11015.75049146936	10246.548940603638	11932.238566204305	11948.436545122682	11923.943690056125	1.0901919786444954	1.02008402966054	1.252452696837352	0.9868897072930171	0.9476551495571591	0.923834494510055	0.8593255056335651	1.000695648718561	1.0020540901318564	1.0	13.541573846986422	-7.499450092340748	23.121738056490727	0.9508679330301788	1.1123011183458522	0.5476545059095064	0.06728536185298688	223.18567170584464	220261.48198671694	0.01916077175084514	0.028170713096707732	3.166284301254881e-08	7.499450092340748	0.1614331853156734	
SRPTSEGS(ph)DIESTEPQKQCSK	ddPTM_K562_Methotrexat_30min_R1	2	SRPTSEGSDIESTEPQKQCSK	21	2	H0YA82;Q4G0J3;Q4G0J3-3;D6RFF0	H0YA82	LARP7	La-related protein 7	1	S(0.01)RPT(0.043)S(0.043)EGS(0.905)DIESTEPQKQCSK;S(0.019)RPT(0.164)S(0.164)EGS(0.64)DIES(0.011)T(0.001)EPQKQCSK	92.51799999999999	0.00032448	47010000.0	5019.3	3250.1	7542.6	5892.299999999999	3613.3999999999996	3122.8	2880.3	4006.2	4347.4	6764.6	True	False	4798.657581940123	3787.1237827457826	5959.511335727714	5375.731207385921	4088.62543541905	3726.2369037082044	3526.28059492593	3865.299675264221	4145.290322900514	5539.465389685783	0.8662672738916272	0.6836623241291885	1.0758278852728347	0.9704422411222703	0.738090257415792	0.6726708520728873	0.6365741722101368	0.6977748579242363	0.748319563584393	1.0	12.43553103406547	-7.829481221885576	7.954625983865324	0.7235573052631056	0.8960261051587194	0.2263454598982514	0.1310918228155517	0.3359553588386802	34.37657907133719	0.041012202961592865	0.04667169975022363	1.4808762843176051e-08	7.829481221885576	0.1724687998956138	
SRPTSEGSDIES(ph)TEPQKQCSK	ddPTM_K562_Methotrexat_30min_R1	1	SRPTSEGSDIESTEPQKQCSK	21	2	H0YA82;Q4G0J3;Q4G0J3-3;D6RFF0	H0YA82	LARP7	La-related protein 7	1	SRPT(0.026)S(0.026)EGS(0.215)DIES(0.68)T(0.049)EPQKQCS(0.004)K	69.256	0.030494999999999998	19635000.0	1683.2	1142.7	2409.1	1898.6	1101.5	1279.2	1038.5	1104.8	1135.2	2023.2	True	False	1609.208543406773	1331.511752421035	1903.4628322994238	1732.1526857666643	1246.3665570139158	1526.3872957677504	1271.4100606987386	1065.9435577933987	1082.4247997784105	1656.77887479116	0.9712874589915427	0.8036749940989406	1.1488937125295968	1.0454941888277065	0.75228298475922	0.9212981400189294	0.7673987639774814	0.6433831176944255	0.6533308797257885	1.0	10.694165347975632	-8.222896782088021	1.327768445080832	0.7446792475055968	0.9798768235332446	0.2909449281746769	0.13719271464171812	0.5111252571029352	1.8297729772094304	0.06530754499227867	0.06086320218582578	5.985538352648299e-09	8.222896782088021	0.2351975760276478	
SRS(ph)CSRS(ph)Y(ph)S(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SRSCSRSYSR	10	2	J3QK89;Q8IWX8	J3QK89	CHERP	Calcium homeostasis endoplasmic reticulum protein	4	S(0.134)RS(0.707)CS(0.18)RS(0.98)Y(1)S(1)R	54.871	0.031218	0.0	0.0	0.0	0.0	0.0	115.19	127.27	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	130.33950404215435	151.86312627608012	0.0	0.0	0.0	0.0											0.0														
SRS(ph)DIDVNAAAGAK	ddPTM_K562_Methotrexat_30min_R1	1	SRSDIDVNAAAGAK	14	1	E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2	E3W994	CLASP2	CLIP-associating protein 2	1	S(0.005)RS(0.995)DIDVNAAAGAK	137.32	5.8197e-05	232810000.0	3348.4	2357.3	4122.7	3203.3	2034.4	2386.8	2288.8	2588.3	2861.0	3188.5	True	False	3201.2083452609536	2746.8037577510345	3257.4016100289905	2922.471662444092	2301.959258818983	2848.0153201520247	2802.121662905415	2497.268021937595	2727.992734466201	2611.031752803287	1.2260319476482944	1.0519993695220207	1.2475534265455563	1.1192784841878822	0.8816282131948515	1.0907624225918757	1.0731855941226942	0.9564295873676942	1.0447949288771923	1.0	11.35040428705941	-7.537228967477726	24.992714336946754	1.0118948139962076	1.1662988052066863	0.5177613617605079	0.07381128979730855	188.83619625431947	328880.2968412812	0.020978207053691782	0.027095267452408287	2.902492007586406e-08	7.537228967477726	0.15440399121047865	
SRS(ph)DIDVNAAASAK	ddPTM_K562_Methotrexat_30min_R1	3	SRSDIDVNAAASAK	14	1	H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-4;Q7Z460-5;Q7Z460-3;Q7Z460	H0Y5T1;Q7Z460	CLASP1	CLIP-associating protein 1	1	S(0.141)RS(0.859)DIDVNAAASAK;S(0.232)RS(0.768)DIDVNAAASAK;S(0.058)RS(0.942)DIDVNAAASAK	178.43	9.224799999999999e-05	286466000.0	14561.3	11000.5	19215.199999999997	15644.899999999998	11046.2	9589.7	9690.9	12687.5	13049.9	17076.0	True	False	13921.202687208315	12818.145648470816	15182.192111244825	14273.335907274244	12498.968917010548	11442.77380411508	11864.331013216572	12241.273433656545	12443.212997382212	13983.370930176861	0.995554130454025	0.9166706449021225	1.0857319159345793	1.0207364145988307	0.8938451950836194	0.8183129705456761	0.8484600081381458	0.8754164853940349	0.8898578933159167	1.0	13.771424568447394	-7.817248298049887	5.634570458992257	0.8746778729116138	1.0041707168455354	0.48073555118499467	0.058843706710424645	0.1582182176038806	10.406008020926338	0.01830559176839304	0.02114445796570574	1.5231816601345275e-08	7.817248298049887	0.12949284393392158	
SRS(ph)DVDMDAAAEATR	ddPTM_K562_Methotrexat_30min_R1	1	SRSDVDMDAAAEATR	15	1	O15085;O15085-2	O15085	ARHGEF11	Rho guanine nucleotide exchange factor 11	1	S(0.002)RS(0.998)DVDMDAAAEATR	95.751	0.005192100000000001	10666000.0	1117.0	1138.5	1516.1	1165.6	1130.4	1075.4	941.51	1494.7	1459.1	1255.0	True	False	1067.898017458035	1326.6177738088288	1197.8913287323724	1063.413657710747	1279.067413571067	1283.2058301036898	1152.6675842546656	1442.1305537959743	1391.2667594755806	1027.707338801356	1.0391071243137706	1.2908517081877615	1.1655957717782834	1.034743664427887	1.2445833218072369	1.2486101652249841	1.1215912748069448	1.403250224405298	1.3537577352500512	1.0	10.005213770037889	-7.9023291389386765	24.791872991134717	1.2444785030871222	1.1454133109194078	0.11279395883661225	0.1253583481016753	28.148237854094415	7117.148671661476	0.038656293111191654	0.043832120667128494	1.2521918161116377e-08	7.9023291389386765	-0.09906519216771437	
SRS(ph)DVDMDPS(ph)SATAVLGPAR	ddPTM_K562_Methotrexat_30min_R1	1	SRSDVDMDPSSATAVLGPAR	20	1	M0QZR4;M0QZH8;M0QYS3;M0QYC1	M0QZR4	ARHGEF1		2	S(0.39)RS(0.61)DVDMDPS(0.526)S(0.42)AT(0.054)AVLGPAR	81.854	0.016378999999999998	17956000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
SRS(ph)DVDMDPSSATAVLGPAR	ddPTM_K562_Methotrexat_30min_R1	4	SRSDVDMDPSSATAVLGPAR	20	1	M0QZR4;M0QZH8;M0QYS3;M0QYC1	M0QZR4	ARHGEF1		1	S(0.004)RS(0.978)DVDMDPS(0.014)S(0.004)ATAVLGPAR;S(0.113)RS(0.756)DVDMDPS(0.016)S(0.035)AT(0.08)AVLGPAR;S(0.027)RS(0.972)DVDMDPSSATAVLGPAR;S(0.056)RS(0.944)DVDMDPSSATAVLGPAR	207.76	5.6766000000000004e-27	138363000.0	6660.5599999999995	5250.889999999999	7803.2	7419.14	6017.18	5963.24	4882.8	6158.99	6628.1	6791.54	True	False	6367.769757529358	6118.510322630689	6165.414957037426	6768.71551515795	6808.5446387044885	7115.551733594497	5977.89219487704	5942.374830751236	6319.961077705503	5561.526294631847	1.1449680214001183	1.1001494910734235	1.1085832612152657	1.217060777306999	1.2242223227958664	1.279424272517176	1.0748654017238186	1.0684791397079243	1.1363716977847826	1.0	12.441265152415795	-8.882912805091458	24.205909463057154	1.075611579566175	1.1761564652832917	0.4450320104266575	0.0595182484950904	6.405443589276748	1303.8998549085443	0.02727339745959794	0.018387721167024897	1.3094447986819806e-09	8.882912805091458	0.10054488571711673	
SRS(ph)ESDLSQPESDEEGYALSGRR	ddPTM_K562_Methotrexat_30min_R1	1	SRSESDLSQPESDEEGYALSGRR	23	2	Q15751;H0YNB1	Q15751	HERC1	Probable E3 ubiquitin-protein ligase HERC1	1	S(0.192)RS(0.591)ES(0.192)DLS(0.025)QPESDEEGYALSGRR	126.86	2.1837e-07	29541000.0	249.95	171.07	289.49	127.33	257.8	238.89	250.67	125.06	153.31	302.8	True	False	238.96249728167945	199.3364098071817	228.73000511492268	116.1671765925784	291.70521870012476	285.0521115431192	306.8891284692853	120.6615689153172	146.182651562745	247.9599858080085	0.9637139496640572	0.8039055541869757	0.922447242322496	0.46849162462255023	1.1764205331338722	1.1495891589695064	1.2376558559206594	0.48661709881183635	0.589541296699105	1.0	7.953963516298124	-9.276562830537053	24.98323949014316	0.6535594140242956	0.9495202381976191	0.20094225957704492	0.240842116096379	1301.282228627491	2149645.5635942207	0.13660738648668927	0.06602587311580256	5.28977463097909e-10	9.276562830537053	0.2959608241733235	
SRS(ph)GEGEVSGLMR	ddPTM_K562_Methotrexat_30min_R1	2	SRSGEGEVSGLMR	13	1	Q13263;Q13263-2;M0R0K9	Q13263	TRIM28	Transcription intermediary factor 1-beta	1	S(0.033)RS(0.967)GEGEVSGLMR;S(0.013)RS(0.987)GEGEVSGLMR	154.72	1.965e-07	224190000.0	2264.4	2114.7	2577.5	2415.0	2134.1	2153.12	1799.5300000000002	2282.5	2433.3	2381.1	True	False	2164.8596873160022	2464.118231245963	2036.5179736215882	2203.2806995293868	2414.771556353517	2569.1799673729374	2203.1204107166136	2202.2231812666832	2320.1764141127614	1949.859716669251	1.110264327637895	1.2637412887605926	1.0444433290310582	1.1299688283693707	1.2384334809882775	1.317622978416934	1.1298866230643414	1.129426472294386	1.1899196615416443	1.0	10.929154617177597	-12.384616685996443	3.26489093085689	0.998305280545835	1.173960116862621	0.3095063636683817	0.07733298276593786	21392388.99311854	25132759.661467835	333818.0971824126	0.02034870623542951	4.124614023309349e-13	12.384616685996443	0.17565483631678602	
SRS(ph)PGSPVGEGTGSPPK	ddPTM_K562_Methotrexat_30min_R1	1	SRSPGSPVGEGTGSPPK	17	1	E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;P35611;P35611-3;A0A0A0MSR2;H0Y9H2	E7EV99	ADD1	Alpha-adducin	1	S(0.335)RS(0.528)PGS(0.136)PVGEGTGSPPK	76.417	0.015633	32462000.0	3632.4	2468.1	5463.9	3986.4	3025.6	3011.7	2212.6	3621.6	3908.9	4784.4	True	False	3472.72404531295	2875.911574473052	4317.102058611444	3636.9185012852768	3423.519432502321	3593.6684010817194	2708.8318731844292	3494.2262752575784	3727.176092189771	3917.8987982161034	0.8863741061648018	0.7340443749548894	1.1018921827631447	0.9282829109677967	0.8738151771712727	0.9172438049492211	0.6913991434433717	0.89186231069791	0.951320155050158	1.0	11.93586441703088	-7.777436323552341	21.386285668025632	0.873871282024747	0.9134083576267223	0.0029321332531463407	0.11227529417038648	219.82670394987446	293881.3218827664	0.03572192000357074	0.040716348685304875	1.6694125592703616e-08	7.777436323552341	0.03953707560197539	
SRS(ph)PLGFYVHLK	ddPTM_K562_Methotrexat_30min_R1	1	SRSPLGFYVHLK	12	1	Q8IXT5;B9ZVT1	Q8IXT5	RBM12B	RNA-binding protein 12B	1	S(0.017)RS(0.983)PLGFYVHLK	82.529	0.022137	5518700.0	2229.1	1748.1	2246.5	2003.6	1757.9	1497.6	1455.2	1997.1	2198.2	2935.9	True	False	2131.111433048976	2036.9438123805137	1774.9903502389514	1827.9474987896806	1989.0946623465857	1786.9900048012687	1781.5656430705872	1926.8608610329447	2096.0061617978354	2404.180060547333	0.8864192279191473	0.8472509383996742	0.7382934329115345	0.7603205470282172	0.827348456543538	0.7432845959110252	0.7410283748318742	0.8014627908503149	0.8718174633395224	1.0	11.231329235091657	-10.061817576648169	2.3326684494876853	0.9994215931989381	0.7893204987560859	0.6469788149662878	0.04714712022178132	0.23165846401362625	2.8714266889493456	0.04833693774120338	0.01323450286795012	8.673261155044466e-11	10.061817576648169	-0.2101010944428522	
SRS(ph)PSTESQLMSK	ddPTM_K562_Methotrexat_30min_R1	1	SRSPSTESQLMSK	13	1	P35612;A0A1C7CYY0;P35612-5;P35612-6;P35612-4;P35612-3	P35612	ADD2	Beta-adducin	1	S(0.002)RS(0.435)PS(0.435)T(0.127)ESQLMSK	95.822	0.012443000000000001	15490000.0	5988.1	4769.8	7314.5	5956.9	4342.2	4144.8	3627.4	5575.3	5575.6	6446.1	True	False	5724.870293948492	5557.928377262498	5779.2864085567835	5434.667825683896	4913.275409773784	4945.723939570183	4440.936787846514	5379.213538889878	5316.3915729778955	5278.648826013884	1.0845332740711162	1.0529073936254836	1.0948419944277579	1.0295566166290755	0.9307827763727167	0.9369299043340403	0.841301805484954	1.0190512224227528	1.0071500772656083	1.0	12.365952975330513	-7.59329483409949	3.9454107637348153	0.9504323368230146	1.073888961696404	0.5569159754174936	0.048996599831508815	0.17087219633750153	5.280452624293328	0.015672414651064136	0.020949018271006196	2.5509689113731244e-08	7.59329483409949	0.12345662487338938	
SRS(ph)RDDLYDQDDSRDFPR	ddPTM_K562_Methotrexat_30min_R1	1	SRSRDDLYDQDDSRDFPR	18	3	S4R3V8;Q86X29-6;Q86X29-5;Q86X29-4;Q86X29;Q86X29-2;Q86X29-3	S4R3V8	LSR	Lipolysis-stimulated lipoprotein receptor	1	S(0.03)RS(0.952)RDDLY(0.018)DQDDSRDFPR	62.69	0.023593	44675000.0	1176.8	1062.5	1515.6	1177.9	1134.3	901.35	786.47	1603.0	1170.0	1550.7	True	False	1125.0692810605333	1238.0600655879493	1197.4962718994675	1074.6353358077288	1283.4803319299904	1075.5231308945142	962.8559176097617	1546.6215814109498	1115.6069553741545	1269.8532034097718	0.8859837326389625	0.9749631392538504	0.9430194519208884	0.8462673739942146	1.010731262860642	0.846966506054835	0.7582419093989209	1.2179530494217818	0.878532221187898	1.0	10.310446013979654	-9.251067507061551	24.976905325980056	1.036181988900316	0.9007872338029073	0.271581459674368	0.10246172282312899	889.7506740769636	2142648.5854929765	0.04694785428680166	0.0267245491430533	5.609607730898919e-10	9.251067507061551	-0.13539475509740884	
SRS(ph)SDIVSSVR	ddPTM_K562_Methotrexat_30min_R1	2	SRSSDIVSSVR	11	1	Q14C86-4;Q14C86-2;Q14C86-6;F8W9S7;Q14C86-3;Q14C86-5;Q14C86;H0Y4E7;H0Y7I9;C9IZ08	Q14C86-4	GAPVD1	GTPase-activating protein and VPS9 domain-containing protein 1	1	S(0.003)RS(0.973)S(0.024)DIVSSVR;S(0.003)RS(0.97)S(0.027)DIVSSVR	96.37100000000001	0.0073528000000000005	77931000.0	1952.13	1698.2	2328.8999999999996	2330.0	1510.9299999999998	1547.42	1844.4	1719.73	1859.73	2138.35	True	False	1866.3167026144624	1978.7986855354873	1840.0957163015769	2125.732517558374	1709.643778473932	1846.4370147099241	2258.0536504118973	1659.2461211477569	1773.2715582204933	1751.074093964845	1.065812525607458	1.1300485184239235	1.0508382955601645	1.2139592064578	0.9763400557213973	1.0544596719657677	1.2895249025694457	0.9475590592462207	1.0126764848684318	1.0	10.774024415112063														
SRS(ph)WEDSPER	ddPTM_K562_Methotrexat_30min_R1	1	SRSWEDSPER	10	1	Q9UDY2-7;A0A3B3ITE1;A0A1B0GTW1;A0A2R8YDH4;Q9UDY2-3;Q9UDY2;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3IRI3;Q9UDY2-5;A0A3B3IRV6;A0A3B3ISF1;A0A3B3ISZ5;B1AN86;A0A3B3IU26	Q9UDY2-7	TJP2	Tight junction protein ZO-2	1	S(0.041)RS(0.952)WEDS(0.007)PER	115.57	0.007367	13518000.0	2509.8	1991.4	2696.3	2626.0	1769.9	1598.4	2056.4	2267.3	2189.2	2427.4	True	False	2399.4721971496656	2320.445001987616	2130.3834771196466	2395.7826571280198	2002.6728726817335	1907.2681782013549	2517.600047010964	2187.5577738821257	2087.424569833419	1987.7743380130776	1.2071149884891408	1.1673583653902415	1.0717431231399823	1.20525887235408	1.0074950835131256	0.9594993464438251	1.2665421818089697	1.1005060947052703	1.050131561674123	1.0	10.956938268972536	-6.164286731870268	0.8339580334471863	1.0826916959913304	1.3021602004385529	0.18956620718985595	0.08833495852088709	5.308850421178164	2.576810186096431	0.033460893914435484	1.1168924866463856	6.850357996784793e-07	6.164286731870268	0.21946850444722243	
SRSDVDMDPS(ph)SATAVLGPAR	ddPTM_K562_Methotrexat_30min_R1	3	SRSDVDMDPSSATAVLGPAR	20	1	M0QZR4;M0QZH8;M0QYS3;M0QYC1	M0QZR4	ARHGEF1		1	SRS(0.006)DVDMDPS(0.692)S(0.188)AT(0.114)AVLGPAR;S(0.109)RS(0.15)DVDMDPS(0.565)S(0.148)AT(0.027)AVLGPAR;S(0.001)RS(0.003)DVDMDPS(0.402)S(0.402)AT(0.191)AVLGPAR	143.76	1.9195e-10	96662000.0	4399.3	4054.26	6054.1	4575.5	4086.4800000000005	4265.8	3707.7	4977.5	4632.099999999999	6170.6	True	False	4205.912039573086	4724.157554362916	4783.427144171661	4174.3730189220305	4623.923747531757	5090.105477084172	4539.2461069356905	4802.4385037261445	4416.754682041556	5053.04454566347	0.8323520605379594	0.9349131027188737	0.9466425836829017	0.8261104728444327	0.9150767830653729	1.0073343765497789	0.8983190363582443	0.9504049410859844	0.8740779231467535	1.0	12.30293718290897	-8.001553445897088	24.999757630325707	0.9423080001210218	0.8901748504402733	0.232022868674714	0.051817530715639694	104.3256135338453	1678965.088147428	0.015936688302486814	0.017811422708762823	9.964294482686399e-09	8.001553445897088	-0.05213314968074845	
SRSES(ph)DLSQPES(ph)DEEGYALSGRR	ddPTM_K562_Methotrexat_30min_R1	1	SRSESDLSQPESDEEGYALSGRR	23	2	Q15751;H0YNB1	Q15751	HERC1	Probable E3 ubiquitin-protein ligase HERC1	2	S(0.143)RS(0.212)ES(0.395)DLS(0.247)QPES(0.958)DEEGY(0.032)ALS(0.013)GRR	69.149	0.0072152	17575000.0	937.37	1020.1	1572.0	1617.5	1097.2	1101.0	1070.4	1306.7	1344.8	1714.1	True	False	896.1643371751463	1188.6541862647225	1242.058682651071	1475.6962863307585	1241.5010316438206	1313.7526677926005	1310.4644477341653	1260.7426203553903	1282.2805415274909	1403.6598800313982	0.6384483520004149	0.846824934711487	0.8848715421169462	1.0513204141004222	0.8844742585476261	0.9359480074070461	0.9336054028308138	0.898182414622543	0.9135265314406562	1.0	10.454977684096205	-6.234977714819433	1.6885337351712517	0.9375390254056192	0.5210578224063815	0.7799168352926703	0.0485716579987561	0.46185404329929414	1.2275773112905115	0.013242265241184714	0.3187976386961869	5.821330883050127e-07	6.234977714819433	-0.41648120299923763	
SRSPS(ph)TESQLMSK	ddPTM_K562_Methotrexat_30min_R1	1	SRSPSTESQLMSK	13	1	P35612;A0A1C7CYY0;P35612-5;P35612-6;P35612-4;P35612-3	P35612	ADD2	Beta-adducin	1	S(0.007)RS(0.311)PS(0.536)T(0.145)ES(0.001)QLMSK	89.506	0.025658999999999998	18424000.0	4690.1	3371.1	6517.9	4832.0	3242.1	3337.8	3058.2	4120.5	4635.4	5216.9	True	False	4483.928819767173	3928.1169760974444	5149.881862373674	4408.386062163972	3668.4929772989694	3982.7826108611634	3744.079198487129	3975.579679478366	4419.901265761846	4272.068857205417	1.0495918885306414	0.9194882169261267	1.2054772604350017	1.0319089437729072	0.8587157885134656	0.9322842734951864	0.876408907167364	0.930598221227876	1.0346044067869107	1.0	12.06071918523348	-7.609734970351507	7.670671163452321	0.9322929274297179	1.0564324946429682	0.32270554720006417	0.08039391858263471	0.2714525260711482	20.655914839700852	0.02386984093314719	0.030852825841189264	2.4562073671160878e-08	7.609734970351507	0.12413956721325026	
SRSVS(ph)SVAGMGMDPSTAGGVPFGLYTPASR	ddPTM_K562_Methotrexat_30min_R1	1	SRSVSSVAGMGMDPSTAGGVPFGLYTPASR	30	1	H3BRB6;Q8ND25;Q8ND25-2	H3BRB6	ZNRF1	E3 ubiquitin-protein ligase ZNRF1	1	S(0.028)RS(0.063)VS(0.452)S(0.452)VAGMGMDPS(0.003)T(0.002)AGGVPFGLYTPASR	44.336000000000006	0.029160000000000002	9900900.0	352.23	255.37	210.8	286.98	311.86	129.54	201.22	339.22	312.28	389.01	True	False	336.7463909482933	297.56555195218345	166.55596075244645	261.82090896519395	352.8750562599727	154.57177164927646	246.34870718709698	327.2894403282737	297.7621709608897	318.55651941602827	1.0571009237720526	0.9341059868988867	0.5228458706724121	0.8218978203464774	1.1077313906708188	0.48522557922416554	0.7733280977538891	1.0274140392048936	0.9347232054981691	1.0	8.31540555298537	-9.259866627405922	24.939039599492585	0.985801472756742	0.806865907071125	0.14767545043035246	0.18956277764560892	272.32388834765794	4318318.649412344	0.09759335071354014	0.05247047952588619	5.497096647366609e-10	9.259866627405922	-0.17893556568561697	
SRT(ph)GSESSQTGTSTTSSR	ddPTM_K562_Methotrexat_30min_R1	1	SRTGSESSQTGTSTTSSR	18	1	E7EX17;P23588-2;P23588	E7EX17	EIF4B	Eukaryotic translation initiation factor 4B	1	S(0.257)RT(0.671)GS(0.071)ESSQTGTSTTSSR	118.44	0.0014765999999999998	5051100.0	0.0	68.565	0.0	65.15899999999999	59.88	134.96	56.915	139.23	0.0	126.94	True	False	0.0	79.89420084427083	0.0	59.44661163587382	67.75526957239518	161.03910994122558	69.6796375586603	134.33320198368475	0.0	103.94993592625035	0.0	0.7685834544520892	0.0	0.5718773283135987	0.6518067468600048	1.5491987417431257	0.6703191968112044	1.2922874919229435	0.0	1.0	6.69974505870781	-7.7352443995571045	2.709017324499679	0.914859812415807	0.31169420256607006	0.27561818041941544	0.43661594306324275	0.34897012651758996	5.2421849361105615	0.13430178153185218	0.17166667330654597	1.8397363970159264e-08	7.7352443995571045	-0.603165609849737	
SRT(ph)PPSAPSQSR	ddPTM_K562_Methotrexat_30min_R1	1	SRTPPSAPSQSR	12	1	Q9UQ35;I3L3Q8	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	S(0.005)RT(0.993)PPSAPS(0.001)QS(0.001)R	109.72	0.01197	12269000.0	741.37	650.77	906.96	717.5	781.1	479.72	604.54	743.25	568.76	836.75	True	False	708.7802624913726	758.2986813013366	716.6014903417404	654.5978889906145	883.8283410654292	572.4191006298515	740.1234839622681	717.1094762218894	542.3184717423969	685.2064667267215	1.0344039306535806	1.1066718107956302	1.0458183410979687	0.9553294091307598	1.2898715700795091	0.8353965241518181	1.0801466709704142	1.0465597028696632	0.7914672410099829	1.0	9.420394956886286	-9.719200131283637	17.751489549548097	0.8957422415335741	1.0498643740466234	0.21380661345407626	0.11776678201014859	9.39625815907708	3948.7335139855777	0.07475319086126882	0.028244154589009387	1.9089733640565275e-10	9.719200131283637	0.1541221325130493	
SRT(ph)SVQTEDDQLIAGQSAR	ddPTM_K562_Methotrexat_30min_R1	1	SRTSVQTEDDQLIAGQSAR	19	1	G3XAM7;P35221-3;P35221;P35221-2;A0A0A0MTJ6;A0A0A0MRI5;P26232-4;P26232-6;P26232-3;P26232-2;P26232-5;P26232	G3XAM7	CTNNA1;CTNNA2	Catenin alpha-1;Catenin alpha-2	1	S(0.141)RT(0.429)S(0.429)VQTEDDQLIAGQSAR	104.97	0.0025981999999999997	36183000.0	1044.9	908.64	1200.2	1226.1	837.67	874.58	638.47	916.6	1031.3	1095.6	True	False	998.9674471279329	1058.777315760785	948.2944217034456	1118.6097166430568	947.8382876203782	1043.5802072643523	781.6631501726761	884.3626584661744	983.3550881003129	897.1762234189374	1.113457335417441	1.1801219070719708	1.0569767643749053	1.2468115933570842	1.0564683535731465	1.1631830849100104	0.8712481781939484	0.985717895082046	1.0960556715970105	1.0	9.809247577017771	-8.737624860796517	24.999999459363117	0.9870652089944193	1.1359743863855656	0.49527459137723884	0.07314692628646814	188.5949051892314	197983.08931036078	0.027054638954458924	0.02094465301817514	1.8296799929140353e-09	8.737624860796517	0.14890917739114629	
SRTFS(ph)RS(ph)SS(ph)QHS(ph)SRR	ddPTM_K562_Methotrexat_30min_R1	1	SRTFSRSSSQHSSRR	15	3	P49760	P49760	CLK2	Dual specificity protein kinase CLK2	4	S(0.262)RT(0.309)FS(0.434)RS(0.571)S(0.571)S(0.854)QHS(0.778)S(0.221)RR	50.966	0.033339	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
SRTGS(ph)ESSQTGTSTTSSR	ddPTM_K562_Methotrexat_30min_R1	1	SRTGSESSQTGTSTTSSR	18	1	E7EX17;P23588-2;P23588	E7EX17	EIF4B	Eukaryotic translation initiation factor 4B	1	SRT(0.006)GS(0.994)ESSQTGTSTTSSR	110.16	0.00053419	1506400.0	66.882	181.71	171.37	121.75	0.0	136.52	0.0	0.0	121.96	133.87	True	False	63.941947362245585	211.73448895810472	135.4017789096146	111.07636652906953	0.0	162.90055786289355	0.0	0.0	116.29010622002728	109.62484577317738	0.5832797018893565	1.9314461741291786	1.2351376912289733	1.0132408008937632	0.0	1.4859820938763089	0.0	0.0	1.0608006369344487	1.0	6.776431002776056	-7.532503007250956	23.759872426327956	0.5517984891944002	1.2857847475212423	0.22016404631887498	0.5620559266887989	147.30496027689338	363655.36123013915	0.16148830144470866	0.20880958504925232	2.9342491858202648e-08	7.532503007250956	0.7339862583268421	
SRVPVRPPQQYS(ph)DDEDDYEDDEEDDVQNTNSALR	ddPTM_K562_Methotrexat_30min_R1	1	SRVPVRPPQQYSDDEDDYEDDEEDDVQNTNSALR	34	2	F8W6N3;Q92560	F8W6N3	BAP1	Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase BAP1	1	S(0.003)RVPVRPPQQY(0.321)S(0.354)DDEDDY(0.321)EDDEEDDVQNTNSALR	51.323	0.0023274000000000003	63066000.0	361.8	574.53	657.94	522.89	599.11	400.55	474.55	460.22	393.86	673.16	True	False	345.8957052070879	669.4613171597596	519.8473852820903	477.04904553909773	677.9034661576096	477.9506186052006	580.9799174815471	444.0338017448209	375.54953456723473	551.244200946232	0.6274818031887582	1.214455074557888	0.943043726155762	0.8654041978495639	1.2297697916712087	0.8670397217508681	1.053942910391207	0.805511969073996	0.6812761638536776	1.0	9.106547763465075	-9.27765669115301	22.90683794245531	0.807545447170861	0.9816586162309918	0.11042271668246062	0.18098345380336353	507.8408164326317	717311.5059773099	0.09213868742451353	0.044547474908379486	5.276468002588774e-10	9.27765669115301	0.17411316906013086	
SRWDETPASQMGGST(ph)PVLTPGK	ddPTM_K562_Methotrexat_30min_R1	2	SRWDETPASQMGGSTPVLTPGK	22	1	O75533	O75533	SF3B1	Splicing factor 3B subunit 1	1	SRWDETPASQMGGS(0.467)T(0.512)PVLT(0.021)PGK;SRWDETPAS(0.001)QMGGS(0.2)T(0.793)PVLT(0.006)PGK	76.899	0.0024206999999999996	28722000.0	6369.0	5360.799999999999	10524.3	7262.2	6464.7	5571.5	4781.5	7588.700000000001	7861.7	9244.4	True	False	6089.026386025271	6246.5810819801245	8315.393253069129	6625.534201292882	7314.921362803328	6648.113522803335	5853.873091219087	7321.801119683895	7496.211282961531	7570.149579932477	0.8043469051346781	0.8251595316609109	1.0984450393308212	0.8752183997600719	0.9662849175654696	0.8782010781433772	0.7732836754952603	0.9671937182183398	0.9902329146616935	1.0	12.886106091622736	-15.999999999999169	0.11057320531884886	1.307641227660408	0.8553967088606853	0.11938513805109519	0.09153552108547838	445.238381647652	3.263157051697296	30.610751993592114	1.1977773797331643	1.0000000000019142e-16	15.999999999999169	-0.4522445187997226	
SS(ph)DSDVS(ph)DVS(ph)AISRTSSAS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SSDSDVSDVSAISRTSSASR	20	1	Q86UR5-5;Q86UR5-3;Q86UR5-4;Q86UR5;H0YBU6;H0YBE7;A0A0C4DFV1;E5RGM0;Q86UR5-12	Q86UR5-5	RIMS1	Regulating synaptic membrane exocytosis protein 1	4	S(0.45)S(0.488)DS(0.144)DVS(0.866)DVS(0.825)AIS(0.055)RT(0.114)S(0.112)S(0.373)AS(0.573)R	51.431000000000004	0.025195	35971000.0	3004.2	2712.0	4606.3	3658.2	2902.9	2626.6	2568.5	3562.9	3241.3	3604.6	True	False	2872.1389651275117	3160.1119038819006	3639.500578814013	3337.4912857219065	3284.682231825418	3134.1532763161176	3144.551507852395	3437.5907875290536	3090.6126704737158	2951.772010711847	0.9730219524762243	1.0705812957145733	1.232988376340188	1.1306738032647174	1.112783175633299	1.061787043491983	1.065309751715566	1.164585467662879	1.0470363765419626	1.0	11.527365579326789	-8.243787178490718	22.52369518602718	1.0778781980576544	1.1107994136814519	0.04761894161861535	0.07133054707169179	896.6615631581965	1144110.6007193415	0.02468186516849284	0.024609665465455406	5.704437438429564e-09	8.243787178490718	0.03292121562379746	
SS(ph)GSPYGGGYGSGGGSGGYGSR	ddPTM_K562_Methotrexat_30min_R1	1	SSGSPYGGGYGSGGGSGGYGSR	22	0	P51991;P51991-2;H7C1J8	P51991	HNRNPA3	Heterogeneous nuclear ribonucleoprotein A3	1	S(0.161)S(0.55)GS(0.29)PYGGGYGSGGGSGGYGSR	151.22	2.3496e-17	11415000.0	777.29	457.89	600.02	502.19	493.24	354.58	498.88	688.73	674.01	562.3	True	False	743.1212623007665	533.5485397007682	474.0840017584577	458.16378240027433	558.1097054757547	423.09756670835594	610.7665393176571	664.50697552412	642.6754222151571	460.462021201596	1.6138600537815448	1.1587243141322485	1.0295832879361355	0.9950088417817298	1.2120645781368522	0.9188544271344338	1.3264210970621093	1.4431309096677718	1.3957186317735115	1.0	8.846938357853197	-8.924302745792364	24.999992406216826	1.328636625361501	1.1427049324183598	0.08066855547572838	0.20913756396398744	71.42322041425177	23585.821331405863	0.0874546602742661	0.058962284068225665	1.1904118850395875e-09	8.924302745792364	-0.18593169294314116	
SS(ph)ITEPEGPNGPNIQK	ddPTM_K562_Methotrexat_30min_R1	1	SSITEPEGPNGPNIQK	16	0	Q13625-2;Q13625;Q13625-3	Q13625-2	TP53BP2	Apoptosis-stimulating of p53 protein 2	1	S(0.355)S(0.645)ITEPEGPNGPNIQK	270.07	8.184899999999997e-111	9949200.0	1466.9	797.84	1282.1	1452.7	866.85	573.51	679.11	985.08	1074.7	1261.6	True	False	1402.416832416466	929.6694990387666	1013.0047309331667	1325.3440464622527	980.8559690853498	684.3326907409031	831.4177046905354	950.4341780513405	1024.7374315731665	1033.1120148460484	1.3574683212114713	0.8998728943998425	0.9805371696157478	1.282865775846922	0.9494187996947401	0.662399314795386	0.8047701437432523	0.919972049877836	0.9918938284014345	1.0	10.012780971102902	-3.000000000000003	0.6038042923211822	0.9040248159715878	25.287845403962148	0.3504728108660651	0.15649298541314507	224.74533982317203	1.7200013951136108	0.07677765449557043	7237.243712032792	0.0009999999999999929	3.000000000000003	24.38382058799056	
SS(ph)PAFTK	ddPTM_K562_Methotrexat_30min_R1	1	SSPAFTK	7	0	Q5VVQ6-2;Q5VVQ6	Q5VVQ6-2	YOD1	Ubiquitin thioesterase OTU1	1	S(0.086)S(0.914)PAFTK	84.615	0.027302999999999997	21836000.0	3929.7	3201.7	6204.0	5147.0	3162.9	2850.4	2880.2	3761.3	4016.1	5010.2	True	False	3756.955093289919	3730.726505405118	4901.865182676363	4695.770501233022	3578.8767890869844	3401.1994589246397	3526.1581673803657	3629.012947074864	3829.392387588158	4102.804230169367	0.9157042068114543	0.9093113626947564	1.1947597076729177	1.1445270692428766	0.8723001606487195	0.8289938461880341	0.8594507486979956	0.8845201339097419	0.9333597638974058	1.0	12.002394600749206	-7.783670483036141	24.984134939881116	0.8854418836846759	1.04264130207251	0.36286909459808503	0.09320182594834901	258.4814199589237	290489.4445522125	0.031318730653089495	0.03553990791231194	1.6456198486540634e-08	7.783670483036141	0.15719941838783413	
SS(ph)PAFTKR	ddPTM_K562_Methotrexat_30min_R1	1	SSPAFTKR	8	1	Q5VVQ6-2;Q5VVQ6	Q5VVQ6-2	YOD1	Ubiquitin thioesterase OTU1	1	S(0.083)S(0.917)PAFTKR	73.84100000000001	0.033676	0.0	2751.6	1724.7	3188.6	3089.4	1933.8	1897.6	1694.4	2333.6	2342.8	3515.5	True	False	2630.6429586728113	2009.677360112504	2519.356434797206	2818.557098602934	2188.128595509316	2264.2843436904986	2074.4123320635	2251.525965302929	2233.8837393594604	2878.808884108501	0.9137956233199063	0.6980933577099383	0.8751384813019261	0.9790705851165852	0.7600812292848428	0.7865351382614251	0.7205800786271702	0.7821033128429341	0.7759750053888143	1.0	11.491256300343256														
SS(ph)PEQPRPSTSK	ddPTM_K562_Methotrexat_30min_R1	2	SSPEQPRPSTSK	12	1	P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2;P29590-12;P29590-13;P29590-11;P29590-4;H3BT57;H3BRN3;H3BUJ5	P29590-2;P29590-4	PML	Protein PML	1	S(0.228)S(0.771)PEQPRPSTSK;S(0.205)S(0.795)PEQPRPSTSK	170.0	0.0019847000000000003	46466000.0	9691.3	6520.0	12384.8	8527.5	6359.6	6235.6	5569.6	7841.7	7745.1	9705.9	True	False	9265.282056034961	7597.319178949116	9785.399728305967	7779.907314797864	7195.998870617975	7440.541448944175	6818.724577821564	7565.902966282124	7385.031991511427	7948.067457906049	1.1657276570820572	0.955869992194387	1.2311671711558385	0.9788426376601883	0.9053771761159398	0.9361447280549902	0.8579097515131037	0.9519173064838824	0.929160708640619	1.0	12.956388401936827	-7.486157333096182	9.930694401307118	0.9259413066639772	1.1021744273821177	0.5660535293508087	0.0730814734147852	0.410055227849728	108.67804272970913	0.01933612246504039	0.028364102515996314	3.2646953969861264e-08	7.486157333096182	0.17623312071814046	
SS(ph)PPAPPLPPGSGSPGTPQALPR	ddPTM_K562_Methotrexat_30min_R1	1	SSPPAPPLPPGSGSPGTPQALPR	23	0	Q9Y3L3;A0A2R8Y5V0	Q9Y3L3	SH3BP1	SH3 domain-binding protein 1	1	S(0.365)S(0.477)PPAPPLPPGS(0.093)GS(0.027)PGT(0.037)PQALPR	94.973	6.419e-05	9461400.0	818.75	649.93	839.71	789.34	611.08	727.34	623.36	676.56	795.23	630.21	True	False	782.758730343569	757.3198855788951	663.4663463161138	720.1397877294104	691.4477309669213	867.8881611192273	763.1643480377144	652.7650013221418	758.2599308736659	516.0728621402417	1.5167601084415403	1.4674669821586066	1.2856059579738535	1.3954227020248042	1.339825791457761	1.6817163326898221	1.4787918606546029	1.2648698453451217	1.4692885181542648	1.0	9.01143095780208	-11.275765705606311	0.7983570391802813	0.9818723113678276	1.4364542454203333	0.5573771322647465	0.11572013840328862	8.849196569278133	4.604172644844321	0.6444402431584143	0.04089508535241711	5.299492652888507e-12	11.275765705606311	0.4545819340525057	
SS(ph)PQHSLSNPLPR	ddPTM_K562_Methotrexat_30min_R1	1	SSPQHSLSNPLPR	13	0	Q86UE8-2;Q86UE8	Q86UE8-2	TLK2	Serine/threonine-protein kinase tousled-like 2	1	S(0.211)S(0.776)PQHS(0.003)LS(0.011)NPLPR	133.88	0.00016183	79676000.0	703.42	663.83	876.31	749.07	484.39	634.23	670.23	610.1	465.55	603.47	True	False	672.4984990513258	773.516624319293	692.3845064847075	683.4001961062017	548.095775353582	756.7859713842874	820.54613864431	588.6424371920282	443.90668211490436	494.17573525613903	1.360848886485208	1.5652662992819086	1.4010896470378775	1.3829092514062526	1.1091110636370993	1.531410624586886	1.6604338904236324	1.1911601383805814	0.8982769700030305	1.0	8.948880363765864	-9.531904038471618	4.933356632317334	0.9667100804346284	1.4251012504627696	0.651912070347995	0.1412629766745528	0.11805326662613573	8.226457818235298	0.1006572039057259	0.03890147043799911	2.9382988255266995e-10	9.531904038471618	0.4583911700281412	
SS(ph)PSILAVQR	ddPTM_K562_Methotrexat_30min_R1	1	SSPSILAVQR	10	0	O14646;O14646-2	O14646;O14646-2	CHD1	Chromodomain-helicase-DNA-binding protein 1	1	S(0.228)S(0.763)PS(0.009)ILAVQR	89.561	0.015279	12668000.0	3245.0	3432.8	2564.6	3151.7	3276.3	3003.7	3389.1	4051.4	4108.1	3681.9	True	False	3102.353685453289	4000.011852376766	2026.3255073326577	2875.395354329926	3707.1908767541468	3584.122514303935	4149.191946763693	3908.9099656446197	3917.1153276688606	3015.072231659532	1.0289483790395682	1.3266719816444037	0.672065327674536	0.9536737873597388	1.229552923418244	1.1887352072925932	1.3761500978966357	1.2964564910251284	1.299177938935424	1.0	11.55797684964275	-7.796591125192799	7.278305959690606	1.2525589394371588	0.9959170398316887	0.30141153641028096	0.17459466188736658	0.24015066382671302	38.231019789037454	0.055105202949679334	0.06350933041165499	1.5973823255258717e-08	7.796591125192799	-0.2566418996054701	
SS(ph)PVNNHHS(ph)PGQTPTLGQPEAR	ddPTM_K562_Methotrexat_30min_R1	2	SSPVNNHHSPGQTPTLGQPEAR	22	0	Q5SW79-2;H0Y2V6;Q5SW79-3;Q5SW79;E7EWM2;E7EMW0;Q96L14	Q5SW79-2	CEP170;CEP170P1	Centrosomal protein of 170 kDa;Cep170-like protein	2	S(0.214)S(0.8)PVNNHHS(0.967)PGQT(0.018)PTLGQPEAR;S(0.471)S(0.539)PVNNHHS(0.988)PGQT(0.002)PT(0.001)LGQPEAR	68.834	0.018276	35845000.0	1752.83	1936.1299999999999	2602.53	2234.37	1937.04	2056.38	1790.67	2293.34	2698.31	2407.4700000000003	True	False	1675.7776919793796	2256.0425739169855	2056.294518676776	2038.486251183221	2191.794712299806	2453.7463315125765	2192.273330179499	2212.681932322515	2572.8661570561003	1971.4538541387271	0.8500212614469131	1.1443547457024232	1.043034567793682	1.0340015044753752	1.1117656686198927	1.2446379743362288	1.1120084426917727	1.1223604994240017	1.3050602993596891	1.0	10.94504422631027	-7.881010991767472	3.5835656605903834	1.1631403694678775	1.0280577693300361	0.29006256182310286	0.10170538793221465	0.30979161970061847	7.67353797688439	0.03140304349703824	0.03633752961063478	1.3151915449569907e-08	7.881010991767472	-0.13508260013784135	
SS(ph)QPLASK	ddPTM_K562_Methotrexat_30min_R1	1	SSQPLASK	8	0	P17096;P17096-2;P17096-3;A0A669KAX1;A0A1W2PRV2	P17096	HMGA1	High mobility group protein HMG-I/HMG-Y	1	S(0.003)S(0.997)QPLASK	96.171	0.016541999999999998	10988000.0	2300.8	2026.6	4179.2	2511.5	1827.3	2097.7	1658.8	2641.7	2468.6	2964.8	True	False	2199.659586900132	2361.4612036899184	3302.0430321471727	2291.3206943553014	2067.621978784864	2503.0508367198354	2030.8281258421446	2548.789913670187	2353.835324817639	2427.8459905006084	0.9060128177432599	0.9726569201380842	1.360071044484296	0.9437669042107748	0.8516281456380731	1.030975954205283	0.8364732086747393	1.0498153192759319	0.9695159141178848	1.0	11.24546119233966														
SS(ph)SPELVTHLK	ddPTM_K562_Methotrexat_30min_R1	1	SSSPELVTHLK	11	0	E9PNR6;H0YE29;Q07960	E9PNR6	ARHGAP1	Rho GTPase-activating protein 1	1	S(0.094)S(0.453)S(0.453)PELVTHLK	124.51	0.0014012	30862000.0	6751.3	5017.5	9653.7	5924.9	5169.3	5023.4	4058.5	6626.4	6717.0	7168.1	True	False	6454.520935778366	5846.556592082385	7627.52029561619	5405.47321600069	5849.153557123952	5994.100954940369	4968.721936779812	6393.345756120724	6404.728136109574	5869.8876296908375	1.0995987219807002	0.9960253008097735	1.2994320806134283	0.9208818902527086	0.996467722403746	1.0211611078585627	0.8464765001032073	1.0891768564328475	1.091115970212688	1.0	12.519117170000907	-7.308028458897305	24.999975922287412	0.9937134396513247	1.1181202559580992	0.29023800854775617	0.09721544645537707	554.2975339616471	297437.94958381756	0.027367235983570416	0.04059231061924861	4.9200729386302764e-08	7.308028458897305	0.12440681630677441	
SS(ph)SPELVTHLKWDDPYYDIAR	ddPTM_K562_Methotrexat_30min_R1	1	SSSPELVTHLKWDDPYYDIAR	21	1	E9PNR6;H0YE29;Q07960	E9PNR6	ARHGAP1	Rho GTPase-activating protein 1	1	S(0.085)S(0.519)S(0.397)PELVTHLKWDDPYYDIAR	107.15	5.7254e-05	7232000.0	3794.0	2725.6	5708.3	4866.1	2908.9	2686.4	3278.1	4006.4	4085.4	5522.1	True	False	3627.22030280733	3175.9590727214277	4510.205838535056	4439.496568107637	3291.471336992993	3205.5087799800563	4013.2973711858795	3865.4926411508636	3895.470645714166	4521.994179756946	0.8021284766452951	0.7023359488030418	0.9973931100409943	0.9817563649200134	0.7278804894812817	0.7088706116274457	0.8875060894929305	0.8548203486096992	0.8614497256879584	1.0	12.142743419864932	-10.461090376841044	1.0697583174846634	0.9999466346197465	0.8303634939790733	0.20821185210304172	0.0982901043799775	3.022170018749099	5.166085776233476	0.10281909249775877	0.032223651237704806	3.45867395204722e-11	10.461090376841044	-0.16958314064067326	
SS(ph)SPTQYGLTK	ddPTM_K562_Methotrexat_30min_R1	4	SSSPTQYGLTK	11	0	Q9NYL2	Q9NYL2	ZAK	Mitogen-activated protein kinase kinase kinase MLT	1	S(0.026)S(0.487)S(0.487)PTQYGLTK;S(0.077)S(0.462)S(0.462)PTQYGLTK;S(0.218)S(0.39)S(0.39)PT(0.001)QYGLTK;S(0.005)S(0.474)S(0.474)PT(0.046)QYGLTK	190.85	2.5511e-05	425377000.0	17804.1	12363.0	23066.9	17859.7	11812.0	11167.2	11211.2	14169.2	14850.900000000001	18668.9	True	False	17021.453082027398	14405.77561493066	18225.472917839685	16293.967829973088	13365.485039898667	13325.103353109465	13725.59698845036	13670.861204820987	14160.4849004838	15287.78130466027	1.1134024449210718	0.9423064948305651	1.1921594477730983	1.06581638664638	0.8742593037895161	0.8716178683853549	0.8978148440850799	0.8942344825833958	0.9262616084236612	1.0	13.900091425030125	-7.751845222780042	20.938452746638298	0.9028115907059374	1.0768233666688702	0.6000826971290842	0.06688698725767557	18.071979126609467	39438.53795225381	0.01928686779908536	0.02445458269284786	1.770739915838262e-08	7.751845222780042	0.17401177596293282	
SS(ph)SPVTELASR	ddPTM_K562_Methotrexat_30min_R1	1	SSSPVTELASR	11	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	S(0.031)S(0.485)S(0.485)PVTELASR	220.29	9.5303e-25	45730000.0	2264.4	2439.0	2830.7	2266.1	2022.7	2033.9	2326.4	2402.3	2695.4	2635.5	True	False	2164.8596873160022	2842.0032940884807	2236.5747538043165	2067.4345313472227	2288.7205037422145	2426.922389667002	2848.1544200380813	2317.8097473633993	2570.091442320939	2158.185411482848	1.0030925405192914	1.3168485334797044	1.0363218757315242	0.9579503782887346	1.0604837246905856	1.124519875240705	1.319698671339442	1.0739622902792567	1.190857573518245	1.0	11.075603097929287	-8.520410313456079	24.996828596470625	1.1622668730347998	1.0810107683843997	0.06915869654631779	0.11789124421703584	258.0567314282256	2613289.098600011	0.044834661271818954	0.035360859988995436	3.0170998728392316e-09	8.520410313456079	-0.08125610465040012	
SSAPADS(ph)ERGPKPEPPGSGSPAPPR	ddPTM_K562_Methotrexat_30min_R1	1	SSAPADSERGPKPEPPGSGSPAPPR	25	2	Q9UKJ3-2;Q9UKJ3	Q9UKJ3-2	GPATCH8	G patch domain-containing protein 8	1	S(0.003)S(0.007)APADS(0.822)ERGPKPEPPGS(0.084)GS(0.084)PAPPR	51.645	0.014419	51527000.0	1732.1	1342.9	2178.3	1772.3	1455.5	1433.0	1180.6	1742.3	1407.8	2109.1	True	False	1655.9589579579783	1564.7913996028772	1721.1045982308076	1616.9252106732636	1646.9237619008206	1709.9069690706604	1445.3796029474538	1681.022321454959	1342.3516852784057	1727.1215524031395	0.9587969970346646	0.9060111591020366	0.9965161953054434	0.9361965337201963	0.953565636193509	0.9900327899281168	0.8368719624489277	0.9733086354668914	0.7772189996764501	1.0	10.75415390596446	-8.747581516921107	24.99928191267606	0.8946256027968543	0.9552566982927897	0.17658123134897907	0.06334833802337857	387.3303733022275	698736.176921468	0.02235039723745106	0.017221034485526983	1.7882098512469499e-09	8.747581516921107	0.06063109549593537	
SSAPADSERGPKPEPPGSGS(ph)PAPPR	ddPTM_K562_Methotrexat_30min_R1	1	SSAPADSERGPKPEPPGSGSPAPPR	25	2	Q9UKJ3-2;Q9UKJ3	Q9UKJ3-2	GPATCH8	G patch domain-containing protein 8	1	SSAPADSERGPKPEPPGS(0.096)GS(0.904)PAPPR	118.84	2.7151e-08	22001000.0	1329.1	992.19	1781.2	1545.0	861.27	821.59	804.54	1030.2	1139.7	1512.0	True	False	1270.6743554194047	1156.1325331536068	1407.3504615382235	1409.5522487672467	974.5421012795057	980.3506397200023	984.9785750934645	993.9672820770808	1086.7155957606185	1238.1621484204384	1.0262584404154522	0.9337488911517128	1.136644714372527	1.1384229848775913	0.7870876221848319	0.7917788804726956	0.7955166262755101	0.80277634342571	0.8776843946868955	1.0	10.273984545420827	-7.7679830531805445	24.999328107630742	0.8277301496232093	1.055401342309807	0.6272601112863068	0.08119039599196748	97.08867672484462	370914.9656417207	0.025344767099956134	0.029403842447963267	1.7061489641855e-08	7.7679830531805445	0.22767119268659763	
SSATLWNS(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	1	SSATLWNSPSR	11	0	Q3KQU3-4;Q3KQU3;C9JIR3	Q3KQU3-4	MAP7D1	MAP7 domain-containing protein 1	1	SSATLWNS(0.92)PS(0.08)R	101.71	0.0060323	20470000.0	1240.4	1032.1	1448.9	1247.2	1184.0	1349.3	1315.1	1469.3	1390.6	1828.3	True	False	1185.873501213023	1202.6369822995973	1144.7956903900363	1137.8599124029192	1339.7167530680672	1610.0331286580893	1610.0446517331845	1417.6238861928325	1325.9513095241884	1497.1771534107727	0.7920729343962017	0.8032696595455168	0.7646360938530463	0.7600035238386587	0.8948284777229005	1.0753791727252953	1.075386869259449	0.946864492931443	0.8856342126938629	1.0	10.548029222976222	-7.972704399869084	4.05823026169572	0.9980566178183266	0.7820311107339212	0.7818214762888633	0.05384276966029077	0.1075230196246904	3.9849006872507418	0.01941368236535542	0.0214619448130072	1.0648675678212882e-08	7.972704399869084	-0.21602550708440538	
SSATSGDIWPGLSAYDNS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	3	SSATSGDIWPGLSAYDNSPR	20	0	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4;E9PJA7	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLSAYDNS(1)PR	287.84	1.1980999999999995e-177	223476000.0	6850.9	6156.1	8658.2	6243.0	6529.700000000001	6305.4	6550.2	8447.8	7292.299999999999	8107.799999999999	True	False	6549.742639036034	7173.290889191506	6840.962141303759	5695.6858828828	7388.470002118715	7523.829311080347	8019.249089637822	8150.686085741375	6953.282564679447	6639.3988538116655	0.9864963354740829	1.0804127071042484	1.0303586652843393	0.8578616842115033	1.1128221341721334	1.1332094180124352	1.2078275859318177	1.227624106520138	1.0472759232844675	1.0	12.696836907275568	-7.974934760267825	24.839240324861606	1.1405163812728665	0.9966776369865838	0.3733250469588901	0.0825409495189656	211.23901837771652	209333.35323797673	0.025665919061989055	0.029101384368936348	1.0594128582609125e-08	7.974934760267825	-0.14383874428628263	
SSAYGDATAEGHPAGPGSVSSSTGAISTTTGHQEGDGS(ph)EGEGEGETEGDVHTSNR	ddPTM_K562_Methotrexat_30min_R1	2	SSAYGDATAEGHPAGPGSVSSSTGAISTTTGHQEGDGSEGEGEGETEGDVHTSNR	55	0	Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0	Q5T4S7-3	UBR4	E3 ubiquitin-protein ligase UBR4	1	SSAYGDATAEGHPAGPGS(0.008)VS(0.034)S(0.034)S(0.034)T(0.034)GAIS(0.165)T(0.165)T(0.165)T(0.165)GHQEGDGS(0.193)EGEGEGET(0.003)EGDVHTSNR;SSAYGDATAEGHPAGPGSVS(0.004)S(0.004)S(0.004)T(0.013)GAIS(0.132)T(0.132)T(0.132)T(0.132)GHQEGDGS(0.444)EGEGEGET(0.001)EGDVHTSNR	95.682	1.6937e-28	46098000.0	1261.3200000000002	1171.9	1477.3200000000002	1288.1	1233.71	1466.82	1109.79	1196.04	1364.29	1351.73	True	False	1205.8738830619247	1365.536556105899	1167.2507207723156	1175.1742729042667	1395.964489381424	1750.262205423744	1358.6886579324535	1153.9745952780747	1300.8644556815436	1106.9185984684923	1.0893970746632542	1.2336377381274692	1.0545045700626021	1.0616627767662512	1.261126600739069	1.581202274354562	1.227451286673026	1.0425108014940647	1.175212393649714	1.0	10.112333416534186	-9.252738046049794	23.242947166346678	1.0816462002703826	1.2199646631121224	0.162790800075315	0.1479414298382661	508.005958769562	1356991.0057498335	0.07853595636960213	0.04432043403448904	5.588071495188111e-10	9.252738046049794	0.13831846284173976	
SSDEENGPPS(ph)SPDLDRIAASMR	ddPTM_K562_Methotrexat_30min_R1	1	SSDEENGPPSSPDLDRIAASMR	22	1	Q96B36;Q96B36-3;Q96B36-2	Q96B36	AKT1S1	Proline-rich AKT1 substrate 1	1	SS(0.001)DEENGPPS(0.499)S(0.499)PDLDRIAASMR	60.81399999999999	0.01674	12971000.0	787.12	886.14	1058.5	1161.2	757.5	803.46	880.85	850.66	833.45	1106.5	True	False	752.5191472708766	1032.5595731953933	836.3353152583703	1059.3993988793059	857.1245274063018	958.717273809848	1078.4030351145732	820.7418056413225	794.7030914158886	906.1021277957772	0.8305014679763383	1.1395620223376386	0.9230033675043623	1.1691832149831125	0.945946931491464	1.0580675669993898	1.1901561667644933	0.9057939281501238	0.8770568648250693	1.0	9.823529857000766														
SSDEENGPPSS(ph)PDLDR	ddPTM_K562_Methotrexat_30min_R1	2	SSDEENGPPSSPDLDR	16	0	Q96B36;Q96B36-3;Q96B36-2	Q96B36	AKT1S1	Proline-rich AKT1 substrate 1	1	SSDEENGPPS(0.064)S(0.936)PDLDR;SSDEENGPPS(0.064)S(0.936)PDLDR	337.35	0.0	47823000.0	7982.2	6944.0	9426.4	8619.8	7001.2	6966.799999999999	6762.200000000001	7974.299999999999	8049.4	9050.8	True	False	7631.312045616407	8091.377972181382	7447.927459377901	7864.115517102862	7921.9805165372945	8313.035500433689	8278.79548623689	7693.839349123728	7675.185150930531	7411.612415954833	1.0296426225943267	1.0917162849426976	1.0048997493912248	1.0610532601750646	1.068860603056334	1.1216230738858364	1.1170032945078576	1.0380790194265086	1.0355621314477144	1.0	12.855571723474624	-4.277062318000575	21.429239257765506	1.0613493541363581	0.4671752491812846	0.0	0.04107437969743726	0.0	0.0	0.009601576147994176	0.0	5.283694292854489e-05	4.277062318000575	-0.5941741049550735	
SSDQPLTVPVS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	3	SSDQPLTVPVSPK	13	0	Q9ULW0;Q9ULW0-2	Q9ULW0	TPX2	Targeting protein for Xklp2	1	SSDQPLT(0.001)VPVS(0.999)PK;SSDQPLT(0.001)VPVS(0.999)PK;SSDQPLT(0.009)VPVS(0.991)PK	176.43	1.8804e-08	228882000.0	14315.699999999999	9368.1	17544.9	13810.500000000002	8671.5	7451.9	7557.099999999999	9179.599999999999	10253.3	14559.999999999998	True	False	13686.398969135173	10916.019294526564	13862.465255244771	12599.754907184513	9811.954243437289	8891.87420992159	9251.972045937835	8856.748264953188	9776.626320972498	11923.042910715334	1.1478948009853338	0.915539713835656	1.162661692912844	1.0567566519332923	0.8229404453974755	0.7457722224525748	0.7759740625963036	0.7428261670511609	0.8199774498996533	1.0	13.541464856285813	-7.773745181230959	5.093861702733821	0.7973348823159281	1.0680678934002155	0.6370236182010409	0.09291568600415415	0.10516449007186786	7.513766459648002	0.027191810639040116	0.03270277183032816	1.683661646144911e-08	7.773745181230959	0.2707330110842874	
SSDVHSS(ph)GSSDAHMDASGPSDSDMPSR	ddPTM_K562_Methotrexat_30min_R1	1	SSDVHSSGSSDAHMDASGPSDSDMPSR	27	0	O15042-2;O15042;C9J5L1;E7EW00;H0Y8D9;E7ET15	O15042-2	U2SURP	U2 snRNP-associated SURP motif-containing protein	1	S(0.008)S(0.008)DVHS(0.066)S(0.306)GS(0.306)S(0.306)DAHMDASGPSDSDMPSR	98.135	4.023e-08	42524000.0	1742.3	1443.5	1596.8	1939.1	1194.3	1226.0	1501.6	1692.5	1716.6	1550.6	True	False	1665.7105781711143	1682.0138396952525	1261.6535015631239	1769.10211364697	1351.3713836057375	1462.907148695484	1838.3720242130255	1632.9738156818669	1636.7956406797214	1269.7713143787919	1.3118193483414982	1.324658874120291	0.99360687021061	1.3932446682436397	1.0642635947929464	1.1521028488591898	1.447797728138479	1.2860377275736175	1.289047580572009	1.0	10.31035297589618														
SSDVHSSGSSDAHMDAS(ph)GPSDSDMPSR	ddPTM_K562_Methotrexat_30min_R1	3	SSDVHSSGSSDAHMDASGPSDSDMPSR	27	0	O15042-2;O15042;C9J5L1;E7EW00;H0Y8D9;E7ET15	O15042-2	U2SURP	U2 snRNP-associated SURP motif-containing protein	1	SSDVHS(0.003)S(0.03)GS(0.058)S(0.027)DAHMDAS(0.451)GPS(0.296)DS(0.113)DMPS(0.02)R;SSDVHSS(0.003)GS(0.003)S(0.01)DAHMDAS(0.673)GPS(0.199)DS(0.1)DMPS(0.01)R;SSDVHSSGSSDAHMDAS(0.775)GPS(0.155)DS(0.062)DMPS(0.008)R	64.0	0.00053887	34525600.0	1015.8899999999999	1090.63	968.8199999999999	1437.56	699.1	685.0699999999999	863.15	831.55	1164.47	1051.41	True	False	971.2326919923394	1270.8380699597044	765.4779217086584	1311.5313467558858	791.0439037752421	817.4500818571089	1056.7333595494617	802.3039151729731	1110.3340438671303	860.9894606287921	1.1280424864702003	1.4760204718784762	0.8890677025821194	1.5232838573866594	0.9187614250208501	0.9494309968209299	1.2273476132654577	0.9318394148367853	1.2896023640710288	1.0	9.749851767476242	-7.796085417259391	24.999983511496342	1.052978249060989	1.2438819122634195	0.19334991908883692	0.20096746674610116	306.3339352879028	221043.56040348107	0.05854450390062303	0.06638618651753456	1.599243457664773e-08	7.796085417259391	0.19090366320243057	
SSDVHSSGSSDAHMDASGPS(ph)DSDMPSR	ddPTM_K562_Methotrexat_30min_R1	1	SSDVHSSGSSDAHMDASGPSDSDMPSR	27	0	O15042-2;O15042;C9J5L1;E7EW00;H0Y8D9;E7ET15	O15042-2	U2SURP	U2 snRNP-associated SURP motif-containing protein	1	SSDVHSSGS(0.001)S(0.004)DAHMDAS(0.297)GPS(0.447)DS(0.188)DMPS(0.062)R	59.431000000000004	0.0015356	33577000.0	1071.2	484.78	794.14	722.7	677.73	567.41	528.08	631.43	795.01	701.89	True	False	1024.1113306186633	564.881655148919	627.4608665652174	659.3420130641357	766.8633742033965	677.0539520728422	646.515382622812	609.222249002069	758.0501586256469	574.7709195468398	1.7817730434693737	0.982794424593162	1.0916712123499905	1.1471387828458222	1.3342069825105383	1.1779544320137914	1.124822708728091	1.0599392354129387	1.3188735422162763	1.0	9.166843260465456	-6.25234476077934	24.92590464634997	1.1452480409406085	1.7817733880253352	0.7490541121644857	0.11179358232142259	587.3599586900883	1609761.4445409158	0.027901661856265483	0.33403180838292107	5.593134192719047e-07	6.25234476077934	0.6365253470847267	
SSEEVDGQHPAQEEVPES(ph)PQTSGPEAENR	ddPTM_K562_Methotrexat_30min_R1	2	SSEEVDGQHPAQEEVPESPQTSGPEAENR	29	0	Q6JBY9;B7ZKW8	Q6JBY9	RCSD1	CapZ-interacting protein	1	SSEEVDGQHPAQEEVPES(0.897)PQT(0.075)S(0.028)GPEAENR;SSEEVDGQHPAQEEVPES(0.849)PQT(0.108)S(0.042)GPEAENR	143.31	4.7726e-23	81112000.0	3399.8	2965.07	3991.7	4068.2	3494.3	2942.8	3029.07	2931.7	3947.8	4083.2999999999997	True	False	3250.348862805577	3454.9974199273997	3153.896719808068	3711.547222287972	3953.861697842695	3511.4544512080492	3708.4160544638717	2828.5904492966206	3764.267639680416	3343.7748020140066	0.9720597394441284	1.033262592279361	0.9432144526923368	1.109987197718115	1.1824545407367815	1.0501468128454843	1.1090507806417573	0.8459273177107852	1.1257539345691403	1.0	11.70726197210545	-7.259249842203355	24.993904339928566	1.0607308830831266	0.987887296496225	0.13878809357661226	0.0883468015812418	438.74587834521384	5008327.0222326275	0.02503008081624158	0.04084741418985005	5.504909172658242e-08	7.259249842203355	-0.0728435865869016	
SSEMS(ph)PVPMR	ddPTM_K562_Methotrexat_30min_R1	3	SSEMSPVPMR	10	0	E9PCH4;Q8TEU7;Q8TEU7-4;B7Z7Y1;A0A5F9ZHG7;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;D6RE77	E9PCH4	RAPGEF6	Rap guanine nucleotide exchange factor 6	1	S(0.001)S(0.002)EMS(0.997)PVPMR;S(0.001)S(0.002)EMS(0.997)PVPMR;SS(0.001)EMS(0.999)PVPMR	80.102	0.01757	67855000.0	15042.1	13883.6	18874.1	17237.4	13562.2	13837.5	12716.7	15809.099999999999	15945.199999999999	18282.800000000003	True	False	14380.86729490199	16177.62891914999	14912.684339837524	15726.223904789995	15345.867017280203	16511.401035949235	15568.743686940454	15253.084992316812	15203.911132335028	14971.60775604578	0.9605426170141788	1.0805538845764378	0.9960643227388547	1.0504031471462703	1.0249979339114927	1.1028475568551857	1.0398845561962804	1.018800735422511	1.0155162611841364	1.0	13.869941535957642	-6.23917098247768	23.93884142500979	1.0381313559151986	0.9605424694815233	0.3319528183975513	0.032284310420140135	3617.1729207102157	3888408.953991236	0.007847282349674446	0.34269294545010287	5.765394341464806e-07	6.23917098247768	-0.07758888643367523	
SSEPVQHEESIRKPS(ph)PEPR	ddPTM_K562_Methotrexat_30min_R1	1	SSEPVQHEESIRKPSPEPR	19	2	Q9UDY2-7;A0A3B3ITE1;A0A1B0GTW1;A0A2R8YDH4;Q9UDY2-3;Q9UDY2;A0A3B3IRI3	Q9UDY2-7	TJP2	Tight junction protein ZO-2	1	SSEPVQHEES(0.446)IRKPS(0.554)PEPR	47.568000000000005	0.031584	36831000.0	2312.2	1503.1	3229.0	3284.3	1853.8	1484.2	1395.4	2030.8	2295.1	2998.6	True	False	2210.5584565501076	1751.4617266684672	2551.2770268958698	2996.3705182047065	2097.6071932749865	1771.0006444484798	1708.3539708223598	1959.3756129316027	2188.401301948055	2455.5244829719113	0.9002388173603864	0.7132739823260407	1.0389947420960224	1.2202568286259607	0.8542399832789535	0.721231108355737	0.695718565491453	0.7979458671738342	0.8912154275486766	1.0	11.2618154917549	-7.98776979617167	24.999894820735413	0.7993037642045816	0.9653161618453241	0.1858352333397182	0.14273661323509965	369.51099913108123	755317.1678417469	0.04734022910753476	0.053643157504039675	1.0285613569035112e-08	7.98776979617167	0.1660123976407425	
SSEPVREDSSGMHHENQTYPPYS(ph)PQAQPQPIHR	ddPTM_K562_Methotrexat_30min_R1	3	SSEPVREDSSGMHHENQTYPPYSPQAQPQPIHR	33	1	G3V1L9;Q07157;A0A087X0K9;G5E9E7;Q07157-2	G3V1L9	TJP1	Tight junction protein ZO-1	1	SSEPVREDS(0.001)S(0.001)GMHHENQT(0.008)Y(0.008)PPY(0.459)S(0.524)PQAQPQPIHR;SSEPVREDSSGMHHENQT(0.001)Y(0.001)PPY(0.156)S(0.841)PQAQPQPIHR;S(0.001)S(0.001)EPVREDS(0.004)S(0.004)GMHHENQT(0.05)Y(0.045)PPY(0.14)S(0.755)PQAQPQPIHR	76.899	1.5177e-06	131140000.0	2205.8900000000003	1970.1	2630.23	2497.85	1974.3400000000001	2067.71	1907.2600000000002	2025.7299999999998	2397.9100000000003	2503.27	True	False	2108.9217168581085	2295.625539025713	2078.180667219675	2278.86736866231	2234.000316091562	2467.265693661616	2335.0116055544313	1954.4839277053063	2286.431687488238	2049.903545817745	1.0287907063533666	1.119870026913849	1.0137943667933165	1.111694925018156	1.0898075280904875	1.2036008712192248	1.1390836463102714	0.9534516546853554	1.1153850102620986	1.0	11.001340312810287	-12.903892714881275	6.7366760536066455	0.9804098700099921	1.0869923301755597	0.12820489910478428	0.0673756415084681	0.02267491793814815	0.0003234862779955506	0.07461852302569108	0.016119528188145753	1.2476916973423096e-13	12.903892714881275	0.1065824601655676	
SSEVRPSSDLNNSTGQS(ph)PHHK	ddPTM_K562_Methotrexat_30min_R1	1	SSEVRPSSDLNNSTGQSPHHK	21	1	P27448-6;P27448-7;H0YIY6	P27448-6	MARK3	MAP/microtubule affinity-regulating kinase 3	1	SSEVRPSSDLNNS(0.002)T(0.012)GQS(0.986)PHHK	78.917	0.0027988	9250600.0	2874.0	2487.3	4453.4	3110.7	2596.6	2391.0	2052.4	2333.2	2399.2	3474.1	True	False	2747.662401230432	2898.2840481288536	3518.692199311885	2837.989760673319	2938.09841302073	2853.026910710361	2512.70294518834	2251.14003352965	2287.6617156698067	2844.9068252827033	0.9658180636398845	1.018762379973849	1.2368391709848798	0.9975686147089555	1.0327573426693037	1.0028542535577947	0.8832285552756718	0.7912877896470125	0.8041253567038976	1.0	11.474165687667117	-8.69891329002785	2.29347363132789	0.8450821014663704	1.055818858706749	0.491314318851361	0.08651696494486989	0.23839980057789492	2.562985932383204	0.04076004169795283	0.02798895224745174	2.0002611960954637e-09	8.69891329002785	0.21073675724037855	
SSFDWLTGSSTDPLVDHT(ph)SPSSDSLLFAHK	ddPTM_K562_Methotrexat_30min_R1	2	SSFDWLTGSSTDPLVDHTSPSSDSLLFAHK	30	0	P78527-2;P78527	P78527-2	PRKDC	DNA-dependent protein kinase catalytic subunit	1	SSFDWLTGSS(0.001)T(0.001)DPLVDHT(0.457)S(0.457)PS(0.032)S(0.032)DS(0.021)LLFAHK;SSFDWLTGSSTDPLVDHT(0.428)S(0.428)PS(0.065)S(0.065)DS(0.013)LLFAHK	86.51899999999999	5.7187e-05	11306300.0	2316.4	1015.47	1218.68	1423.3600000000001	945.55	1202.23	1288.01	3139.8100000000004	3011.49	3824.9100000000003	True	False	2214.5738295790443	1183.259157461266	962.8957222475877	1298.5762387089644	1069.9063985333707	1434.5439326069916	1576.8790296394639	3029.38110263875	2871.48648721343	3132.1817348643	0.7070387407373696	0.3777747454084206	0.30742013195773416	0.4145916005621636	0.34158503212768526	0.4580014999254641	0.5034442963788566	0.9671792249213139	0.9167687989655668	1.0	11.612952207502095	-9.211829446451084	3.603166141804107	0.9650664323469793	0.42432153365840075	0.8381303229233976	0.10431492334230608	0.08945264665170022	2.3805938487351628	0.057481293505700456	0.029460340747491844	6.140030854679952e-10	9.211829446451084	-0.5407448986885786	
SSFFSDRGS(ph)GSR	ddPTM_K562_Methotrexat_30min_R1	3	SSFFSDRGSGSR	12	1	A0A2R8Y5G6;A0A2R8Y4A4;A0A2R8YFS5;A0A2R8YFR4;A0A2R8YCW1;A0A0D9SFB3;A0A2R8Y645;A0A2U3TZJ9;A0A0D9SG12;A0A2R8YF78;F6S8Q4;O00571;A0A0D9SF53;O00571-2;A0A2R8YDH3;A0A087WX09;A0A2R8Y650;A0A2R8YCU0;A0A2R8YF89	A0A2R8Y5G6	DDX3X	ATP-dependent RNA helicase DDX3X	1	SSFFSDRGS(0.997)GS(0.003)R;SSFFS(0.015)DRGS(0.86)GS(0.124)R;SSFFSDRGS(0.974)GS(0.026)R	161.25	1.0214e-09	309061000.0	11935.8	10426.5	19678.800000000003	12496.5	11724.7	10892.599999999999	10198.099999999999	11380.900000000001	11047.8	12120.800000000001	True	False	11411.116523523388	12149.301904802587	15548.488806713684	11400.951247067902	13266.703559710457	12997.440789462016	12485.283524325285	10980.627296244473	10534.190189386833	9925.605667046602	1.149664504747427	1.224036327086693	1.5665027735622494	1.1486403580306948	1.3366140067156234	1.3094859120400104	1.2578863137568435	1.1062929220229434	1.0613145980965932	1.0	13.276939423812827	-9.388161081114403	1.7910969835278001	1.020376507749166	1.2960036785317677	0.4792432806091407	0.111682277811683	0.32971611353616825	1.9019472171410448	0.09173123890222552	0.03273011267431989	4.0910889188198547e-10	9.388161081114403	0.2756271707826017	
SSFS(ph)GIS(ph)RS(ph)MKDHVT(ph)KPTAMGQGR	ddPTM_K562_Methotrexat_30min_R1	1	SSFSGISRSMKDHVTKPTAMGQGR	24	3	Q86XD5;Q86XD5-2;Q86XD5-3	Q86XD5	FAM131B	Protein FAM131B	4	S(0.439)S(0.439)FS(0.727)GIS(0.727)RS(0.727)MKDHVT(0.918)KPT(0.023)AMGQGR	40.756	0.032241000000000006	19082000.0	1649.5	1216.7	2214.8	1793.0	1339.5	1203.7	1287.6	2010.2	1685.4	1949.9	True	False	1576.9899550555324	1417.7389946361022	1749.9437470328196	1635.8104738120878	1515.6677286610443	1436.2979893024092	1576.3770767026451	1939.5001266077945	1607.0461218697437	1596.7542150826807	0.9876222277414656	0.8878880551836783	1.0959380789498694	1.0244597811989398	0.9492179286857635	0.8995110053478311	0.9872384001322455	1.2146516403636776	1.006445517218522	1.0	10.640926543578557	-9.035167016505397	24.966099804725463	1.0865181879618897	0.9740901684681231	0.24269315564148408	0.07841799735679225	757.6717127852335	537890.193906536	0.03655939714546714	0.021120219011690065	9.222167023359736e-10	9.035167016505397	-0.11242801949376657	
SSFTPS(ph)SPENVIGDFLLQDR	ddPTM_K562_Methotrexat_30min_R1	1	SSFTPSSPENVIGDFLLQDR	20	0	F5H212;P15822	F5H212	HIVEP1	Zinc finger protein 40	1	S(0.001)S(0.001)FT(0.031)PS(0.928)S(0.038)PENVIGDFLLQDR	67.234	0.016543000000000002	31937000.0	618.75	402.2	745.89	541.56	437.49	407.23	426.27	731.39	528.09	638.56	True	False	591.5504908703305	468.65671376891623	589.3378821899539	494.0822756261424	495.02760329370716	485.92143406465055	521.8718984824764	705.6665991442014	503.5392111654164	522.9105962270867	1.1312650673719284	0.8962463510022096	1.1270337347190027	0.9448695038713179	0.9466773227879463	0.9292629324604991	0.9980136226878844	1.3494976086461796	0.9629546901488725	1.0	9.030420494936301	-9.049215798527346	24.99739123023387	1.1284868566576696	0.990340024321958	0.13215714147017377	0.12159711816519955	569.7295521167798	289371.09982487437	0.0533178264833942	0.030783810102359924	8.92861715438618e-10	9.049215798527346	-0.13814683233571157	
SSFTPSS(ph)PENVIGDFLLQDR	ddPTM_K562_Methotrexat_30min_R1	1	SSFTPSSPENVIGDFLLQDR	20	0	F5H212;P15822	F5H212	HIVEP1	Zinc finger protein 40	1	SSFT(0.001)PS(0.246)S(0.752)PENVIGDFLLQDR	85.976	0.0025231999999999997	22931000.0	326.06	459.67	381.49	288.4	265.42	392.08	286.94	414.36	303.67	287.61	True	False	311.7267928132201	535.6226544459415	301.4204623693113	263.11641976988625	300.32738226294475	467.84391097922105	351.29359924592796	399.78672393851645	289.55244798159794	235.52104200211792	1.3235623881556065	2.274202975210703	1.2798026868724568	1.1171673559745892	1.275161572443468	1.986420860752705	1.4915592944887233	1.6974565012960556	1.2294122237239173	1.0	7.879712149128597	-9.960023208377438	4.5107365411976525	1.0020045482683022	1.5573177399709597	0.2292269328485752	0.3359671375315434	0.26112715060359654	11.894211298247702	0.3311335359350016	0.0866735107146596	1.096419602721087e-10	9.960023208377438	0.5553131917026575	
SSFVSDNSLNRS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	SSFVSDNSLNRSPR	14	1	Q6UB98-2;Q6UB98	Q6UB98-2	ANKRD12	Ankyrin repeat domain-containing protein 12	1	SSFVSDNSLNRS(1)PR;SSFVS(0.002)DNS(0.293)LNRS(0.706)PR	113.07	0.0011634	59973000.0	4605.1	4443.7	6240.2	5233.7	5378.200000000001	4586.9	4530.2	5200.7	5492.3	6301.5	True	False	4402.665317991044	5177.945895014753	4930.467297378638	4774.869646843456	6085.527568708348	5473.253507627502	5546.2126692127395	5017.788433215178	5236.964171796129	5160.237287216533	0.8531904780614984	1.0034317429243205	0.9554729798168188	0.925319783001501	1.1793115761912805	1.060659268748436	1.0747979909668852	0.972394902390585	1.01486886751694	1.0	12.33322169240743	-4.990912560214961	0.6894870534996306	1.0394002616493725	1.0058206599946372e-09	0.3828192357855069	0.0663730162807912	16.748347902588662	1.5649925894678995	0.02825600750159311	20.223953505728822	1.021145057851702e-05	4.990912560214961	-1.0394002606435517	
SSGEIVYCGQVFEKS(ph)PLR	ddPTM_K562_Methotrexat_30min_R1	1	SSGEIVYCGQVFEKSPLR	18	1	M0R0P7;M0R3D6;M0R1A7;M0R117;Q02543	M0R0P7	RPL18A	60S ribosomal protein L18a	1	SSGEIVYCGQVFEKS(1)PLR	106.0	0.00055096	50672000.0	3675.3	2799.7	5497.4	3749.7	2871.3	3026.6	2465.2	4352.9	4278.4	5457.4	True	False	3513.7382126799607	3262.302838236784	4343.570866416029	3420.969622784821	3248.9262779428577	3611.4476152053453	3018.0838532831294	4199.806039752793	4079.498117839985	4469.011976712765	0.7862449756208827	0.7299830153143625	0.9719309075584519	0.7654867878204156	0.7269898346373741	0.8081087350009271	0.6753358167330571	0.9397616434319808	0.9128411691661449	1.0	12.125740195745639	-9.344464932837498	9.595584489406777	0.9455275738148603	0.7844667823886624	0.5100983734388257	0.07635909792031215	0.423951065534107	46.630375298171366	0.04224445143397002	0.02023925202831481	4.524129910015189e-10	9.344464932837498	-0.1610607914261979	
SSGEIVYCGQVFEKS(ph)PLRVK	ddPTM_K562_Methotrexat_30min_R1	1	SSGEIVYCGQVFEKSPLRVK	20	2	M0R0P7;M0R3D6;M0R1A7;M0R117;Q02543	M0R0P7	RPL18A	60S ribosomal protein L18a	1	SSGEIVYCGQVFEKS(1)PLRVK	53.553999999999995	0.030474	20582000.0	4292.7	2774.1	6748.5	4782.1	2520.3	2266.1	2683.3	3747.3	3951.1	6141.5	True	False	4103.9980479338465	3232.47287336238	5332.082073709129	4362.8607176892265	2851.763625639738	2703.991753392199	3285.0983301617	3615.505335010141	3767.414223400706	5029.214837648232	0.816031563657154	0.6427390711497132	1.0602215745077466	0.8675033496340739	0.567039531557034	0.5376568392247573	0.653203021984617	0.7189005544055915	0.749105843559952	1.0	12.296117468341162	-7.73985305823701	24.806400182796537	0.6793738759807904	0.8473177385032098	0.1625350377375251	0.15204619482547127	349.0265660146881	401089.7837668498	0.04512978686681608	0.05820670165090133	1.8203166511279414e-08	7.73985305823701	0.16794386252241944	
SSGGS(ph)EHSTEGSVSLGDGQLNR	ddPTM_K562_Methotrexat_30min_R1	2	SSGGSEHSTEGSVSLGDGQLNR	22	0	X6RLN4;Q71RC2-2;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4;Q96J85;Q71RC2-7	X6RLN4	LARP4	La-related protein 4	1	S(0.124)S(0.124)GGS(0.75)EHS(0.001)TEGSVSLGDGQLNR;SSGGS(0.975)EHS(0.025)TEGSVSLGDGQLNR	263.19	1.1189999999999999e-107	9662100.0	1000.69	932.76	1284.1799999999998	1038.78	852.2	977.07	922.45	963.5699999999999	953.04	1368.74	True	False	956.7008657923735	1086.8827357908858	1014.6481673580481	947.7117702099948	964.2792373011883	1165.8749492462448	1129.3328940698618	929.6806969433248	908.733378418619	1120.8479226382215	0.8535510005144292	0.9696968820110856	0.9052505222740627	0.8455310939768675	0.8603122848561775	1.0401722889417861	1.0075701361980212	0.829444100458399	0.8107552863011666	1.0	10.130374830299408	-6.205522318596613	21.101660283760207	0.9154524276270061	0.8535483958467464	0.058019271671399864	0.07779710860671742	30145.51512737961	11373565.5017709	0.020539196588796934	19.511493441753736	6.229851311090479e-07	6.205522318596613	-0.061904031780259716	
SSGGSYRDS(ph)YDSYATHNE	ddPTM_K562_Methotrexat_30min_R1	1	SSGGSYRDSYDSYATHNE	18	1	Q14011	Q14011	CIRBP	Cold-inducible RNA-binding protein	1	SSGGS(0.016)YRDS(0.836)YDS(0.146)Y(0.001)ATHNE	130.02	2.3604e-09	0.0	778.14	557.46	907.53	979.74	578.96	590.37	711.55	771.45	742.85	774.73	True	False	743.9338973185278	649.5707898001492	717.0518551312512	893.8477153444804	655.1033879698382	704.450647125084	871.1332004720149	744.317666237977	708.3150656407612	634.418889712809	1.1726225517265012	1.0238831162391764	1.1302498503092313	1.4089235516759449	1.032603849904899	1.1103872513064312	1.373119896960134	1.173227465807201	1.116478524089035	1.0	9.309291917451667	-7.007459557344324	24.8617531384561	1.1874128210418189	1.0929562231176697	0.046516376391916414	0.1284239697475285	816.0035992837508	2719672.5870733513	0.03354233563094409	0.06550465631516678	9.829704055531018e-08	7.007459557344324	-0.09445659792414918	
SSGHSSSELS(ph)PDAVEK	ddPTM_K562_Methotrexat_30min_R1	3	SSGHSSSELSPDAVEK	16	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	SSGHSSSELS(1)PDAVEK;SSGHSS(0.008)S(0.003)ELS(0.989)PDAVEK;SSGHSSSELS(1)PDAVEK	290.63	5.183799999999998e-171	270277000.0	17475.0	13098.9	24533.3	18195.1	11725.8	11839.1	10997.0	15169.2	15130.0	17944.199999999997	True	False	16706.819923974188	15263.270581769397	19384.09559738138	16599.963832715177	13267.948228991176	14126.838518858644	13463.35718584886	14635.690638015596	14426.609602402532	14694.331497146843	1.1369567868547203	1.038718269336242	1.3191546414442288	1.1296848608552452	0.9029296930974625	0.961380143193422	0.9162279473865825	0.9960092870408815	0.9817806005808231	1.0	13.842972106167892	-7.679559310213176	6.013817956526214	0.9577974133715379	1.1628321251035378	0.6527752911436029	0.07035576372849203	0.12935353589838097	7.4191239445023855	0.021157689618144397	0.02728876276542215	2.091417269408426e-08	7.679559310213176	0.20503471173199994	
SSGKS(ph)S(ph)SGS(ph)S(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	SSGKSSSGSSK	11	1	H0YDX2;H0YDT8;Q9NPA0	H0YDX2	EMC7	ER membrane protein complex subunit 7	4	S(0.286)S(0.393)GKS(0.32)S(0.614)S(0.388)GS(0.999)S(0.999)K	74.78	0.018011000000000003	25508000.0	3876.8	3527.3	4524.0	3625.4	3889.0	3866.1	3605.4	4199.5	4003.0	4341.5	True	False	3706.380513949249	4110.126371151413	3574.4742241179665	3307.5668107966217	4400.471666116313	4613.16910894911	4414.002727822084	4051.801204700742	3816.9014037288407	3555.2122800048523	1.042520170959859	1.1560846575231236	1.0054179448640652	0.9303429866618562	1.237752156422656	1.2975790882852185	1.2415581349803562	1.1396791205658223	1.0736071725437535	1.0	11.79571998970141	-7.77553985955438	24.992407992374698	1.1824671717330448	1.0403285416798114	0.29677273758504785	0.09669251146478988	286.9060450010744	508524.91972030175	0.03138027329143765	0.03575024711877265	1.6767184394416537e-08	7.77553985955438	-0.14213863005323346	
SSGLS(ph)TPVPPSAGHLAHVR	ddPTM_K562_Methotrexat_30min_R1	1	SSGLSTPVPPSAGHLAHVR	19	0	Q63ZY3-3;Q63ZY3;Q63ZY3-2	Q63ZY3-3	KANK2	KN motif and ankyrin repeat domain-containing protein 2	1	S(0.008)S(0.008)GLS(0.492)T(0.492)PVPPSAGHLAHVR	78.501	0.010303	0.0	823.48	856.51	1054.3	1288.8	732.71	861.0	831.25	1010.5	867.73	1381.1	True	False	787.2808052071107	998.0337193192797	833.0168378619745	1175.8129049910867	829.0742078889388	1027.3760644590632	1017.6789725140363	974.9601422431477	827.3894216981333	1130.9694068673734	0.6961114955246828	0.8824586352726314	0.736551168231256	1.0396504961596826	0.7330651057886332	0.908403055131925	0.8998289134388385	0.8620570426777949	0.7315754225305581	1.0	10.143344189093556														
SSGNSSSSGSGSGST(ph)SAGSSSPGARR	ddPTM_K562_Methotrexat_30min_R1	1	SSGNSSSSGSGSGSTSAGSSSPGARR	26	1	E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2;Q12797	E5RHJ2	ASPH	Aspartyl/asparaginyl beta-hydroxylase	1	SSGNSSSSGS(0.007)GS(0.044)GS(0.23)T(0.614)S(0.068)AGS(0.024)S(0.007)S(0.005)PGARR	67.675	0.0012781	1605100.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
SSGNSSSSGSGSGSTSAGSS(ph)SPGARR	ddPTM_K562_Methotrexat_30min_R1	1	SSGNSSSSGSGSGSTSAGSSSPGARR	26	1	E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2;Q12797	E5RHJ2	ASPH	Aspartyl/asparaginyl beta-hydroxylase	1	SSGNSSSSGSGSGSTS(0.002)AGS(0.1)S(0.449)S(0.449)PGARR	88.241	6.368e-05	1847000.0	74.14399999999999	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	70.88471853751884	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
SSGPYGGGGQYFAKPR	ddPTM_K562_Methotrexat_30min_R1	1	SSGPYGGGGQYFAKPR	16	1	F8W6I7;P09651-3;P09651-2;P09651;H0YH80	F8W6I7	HNRNPA1	Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed	0		90.853	0.026128	12714000.0	1340.4	1130.1	1720.4	1733.9	897.91	1168.6	1171.7	1140.7	1035.8	1203.9	False	True	1281.4776209496424	1316.8298165844158	1359.3115506570634	1581.8916790534186	1016.0009035028286	1394.4154110648801	1434.4835513921155	1100.580934445085	987.6458840825205	985.8620439704804	1.299854912548001	1.3357140835658803	1.3788050356239958	1.6045771198193985	1.0305710720041177	1.4144123101128672	1.4550550557914248	1.1163640401577724	1.0018094216355626	1.0	9.945241967813544	-9.436973588051902	4.155546406074944	1.0135293598041883	1.3577007106478893	0.5449115229266756	0.1365052512608805	0.17665601442820267	5.468041166630676	0.0844139762463684	0.03636149529513173	3.656170262135857e-10	9.436973588051902	0.344171350843701	
SSGS(ph)ETEQVVDFSDR	ddPTM_K562_Methotrexat_30min_R1	2	SSGSETEQVVDFSDR	15	0	O95251;O95251-4;O95251-2	O95251	KAT7	Histone acetyltransferase KAT7	1	S(0.024)S(0.092)GS(0.73)ET(0.152)EQVVDFS(0.002)DR;S(0.001)S(0.028)GS(0.897)ET(0.075)EQVVDFSDR	235.35	2.9146999999999987e-213	10483000.0	943.15	808.74	1021.46	1002.58	906.32	787.3499999999999	612.02	868.21	889.0699999999999	1220.8000000000002	True	False	901.6902552959225	942.370538770445	807.0695050768213	914.6853680058683	1025.5169659127123	939.494244311084	749.2810643705749	837.6745621938869	847.7373297559832	999.7012902061327	0.9019596794858583	0.9426521181903582	0.807310656676664	0.9149586751231115	1.025823389405906	0.9397749642969507	0.7495049488393452	0.8379248585556623	0.8479906328631271	1.0	9.965353273146924														
SSGS(ph)PEPSPAIAK	ddPTM_K562_Methotrexat_30min_R1	1	SSGSPEPSPAIAK	13	0	K7ELE9;Q66K64	K7ELE9	DCAF15	DDB1- and CUL4-associated factor 15	1	S(0.003)S(0.016)GS(0.981)PEPSPAIAK	151.74	5.6389e-10	51907000.0	4392.5	3022.2	5684.2	4316.2	2954.5	2261.7	2811.5	3834.0	3408.4	4649.6	True	False	4199.410959430996	3521.5671813834365	4491.164099189072	3937.8054473328098	3343.0685362665604	2698.7415156644174	3442.050443576798	3699.1560468681146	3249.944227946385	3807.5123844548125	1.1029277216736613	0.9248997313209476	1.179553379136848	1.0342199971324988	0.8780190840391043	0.7087938903843757	0.9040155608238831	0.971541435287488	0.8535610392799119	1.0	11.894633013945235	-7.729867295751689	5.196270450750918	0.876090137518077	1.0617220361359363	0.45257747388778224	0.09394274444810571	0.17235187271336783	11.69619102327914	0.028834771884771612	0.036338447056714	1.862656208205889e-08	7.729867295751689	0.18563189861785934	
SSGS(ph)PYGGGYGSGGGSGGYGSR	ddPTM_K562_Methotrexat_30min_R1	42	SSGSPYGGGYGSGGGSGGYGSR	22	0	P51991;P51991-2;H7C1J8	P51991	HNRNPA3	Heterogeneous nuclear ribonucleoprotein A3	1	SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.01)S(0.01)GS(0.98)PYGGGYGSGGGSGGYGSR;S(0.026)S(0.085)GS(0.889)PYGGGYGSGGGSGGYGSR;S(0.031)S(0.003)GS(0.966)PYGGGYGSGGGSGGYGSR;SS(0.002)GS(0.997)PYGGGYGSGGGSGGYGSR;SS(0.003)GS(0.996)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.057)S(0.026)GS(0.917)PYGGGYGSGGGSGGYGSR;S(0.001)S(0.003)GS(0.996)PYGGGYGSGGGSGGYGSR;SS(0.001)GS(0.948)PY(0.001)GGGY(0.007)GS(0.02)GGGS(0.011)GGY(0.001)GS(0.009)R;S(0.012)S(0.009)GS(0.976)PYGGGY(0.001)GS(0.001)GGGSGGYGSR;S(0.005)S(0.015)GS(0.981)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;SS(0.001)GS(0.998)PYGGGYGSGGGSGGYGSR;S(0.003)S(0.003)GS(0.995)PYGGGYGSGGGSGGYGSR;S(0.002)S(0.002)GS(0.995)PYGGGYGS(0.002)GGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;SSGS(0.987)PY(0.013)GGGYGSGGGSGGYGSR;S(0.004)S(0.012)GS(0.984)PYGGGYGSGGGSGGYGSR;S(0.003)S(0.011)GS(0.986)PYGGGYGSGGGSGGYGSR;S(0.003)S(0.008)GS(0.988)PY(0.001)GGGYGSGGGSGGYGSR;S(0.005)S(0.005)GS(0.991)PYGGGYGSGGGSGGYGSR;SS(0.001)GS(0.999)PYGGGYGSGGGSGGYGSR;S(0.001)SGS(0.998)PYGGGYGSGGGSGGYGSR;S(0.052)S(0.052)GS(0.809)PY(0.001)GGGY(0.001)GS(0.083)GGGS(0.001)GGYGS(0.001)R;SSGS(1)PYGGGYGSGGGSGGYGSR;SS(0.002)GS(0.998)PYGGGYGSGGGSGGYGSR;S(0.001)S(0.001)GS(0.998)PYGGGYGSGGGSGGYGSR;S(0.089)S(0.001)GS(0.91)PYGGGYGSGGGSGGYGSR;S(0.02)S(0.059)GS(0.882)PY(0.038)GGGYGSGGGSGGYGSR;S(0.001)S(0.018)GS(0.981)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.03)S(0.008)GS(0.944)PY(0.018)GGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.028)S(0.028)GS(0.944)PYGGGYGSGGGSGGYGSR;S(0.047)S(0.155)GS(0.799)PYGGGYGSGGGSGGYGSR;S(0.005)S(0.015)GS(0.98)PYGGGYGSGGGSGGYGSR;S(0.007)S(0.005)GS(0.985)PY(0.003)GGGYGSGGGSGGYGSR;S(0.045)S(0.045)GS(0.578)PY(0.286)GGGY(0.025)GS(0.018)GGGS(0.002)GGY(0.001)GSR;SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.194)S(0.017)GS(0.789)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR	329.78	0.0	4564267500.0	52980.50999999998	46155.35999999998	65375.92000000001	58383.670000000006	49316.54	48232.92	46325.08	51508.55	54063.35	58366.94999999998	True	False	50651.550217471464	53781.74873302152	51654.407806807765	53265.26429759538	55802.52942681711	57553.24916024258	56714.65842529992	49696.96510117596	51549.956658826784	47796.1297676907	1.0597416666089767	1.1252322937949883	1.0807236497572068	1.1144263051524668	1.1675114637532555	1.2041403653386913	1.1865952055314315	1.0397696496081195	1.0785383023558865	1.0	15.544606182043868	-12.590368348871229	6.7210191157904005	0.9997877102793349	1.1202481070186958	0.3122010342532867	0.05212687486965066	0.00018220726810633055	1.1105134507767008e-05	0.05545978126027719	0.013427411695269755	2.5682166139773797e-13	12.590368348871229	0.12046039673936093	
SSGSPY(ph)GGGYGSGGGSGGYGSR	ddPTM_K562_Methotrexat_30min_R1	1	SSGSPYGGGYGSGGGSGGYGSR	22	0	P51991;P51991-2;H7C1J8	P51991	HNRNPA3	Heterogeneous nuclear ribonucleoprotein A3	1	S(0.012)S(0.012)GS(0.443)PY(0.533)GGGYGSGGGSGGYGSR	100.68	4.3936999999999996e-05	14620000.0	868.41	1086.9	1436.0	997.61	921.36	782.85	839.63	1387.8	878.99	1168.4	True	False	830.2357362047742	1266.4917508588628	1134.6032241011058	910.1510801894456	1042.5349895327654	934.12468299858	1027.9384008324332	1338.9902873874712	838.1259467558358	956.7914379725136	0.8677290611672729	1.323686333923116	1.1858417405002952	0.9512533704504076	1.089615717864226	0.9763096176717828	1.0743599493434886	1.3994588938053785	0.875975592477985	1.0	9.902060669141571														
SSGSPYGGGYGSGGGS(ph)GGYGSR	ddPTM_K562_Methotrexat_30min_R1	1	SSGSPYGGGYGSGGGSGGYGSR	22	0	P51991;P51991-2;H7C1J8	P51991	HNRNPA3	Heterogeneous nuclear ribonucleoprotein A3	1	SSGS(0.003)PYGGGYGS(0.002)GGGS(0.995)GGYGSR	210.71	9.138799999999996e-151	0.0	334.62	518.4	569.67	434.5	346.04	362.11	329.45	477.89	453.61	423.36	True	False	319.9105054626747	604.0567887066288	450.10405200116793	396.4080596047696	391.55032536458964	432.082632637946	403.33754886586377	461.0823378293695	432.52177010877796	346.68540155772297	0.9227688965997887	1.7423773426642357	1.2983069087384858	1.1434229933641087	1.1294110556870296	1.246324854454549	1.1634108244927304	1.3299733295882652	1.2475915287040527	1.0	8.437483277703707	-15.863993980751259	0.1903867625152307	4.068990673720634e-12	1.3015967850412513	0.1117052481394557	0.19915899776232168	283.0581925305792	2.9030373055577923	108.27235672972635	0.5381498129513014	1.3677477822195392e-16	15.863993980751259	1.3015967850371823	
SSGSSSSGLGTVSNS(ph)PASQR	ddPTM_K562_Methotrexat_30min_R1	4	SSGSSSSGLGTVSNSPASQR	20	0	H0Y589;H0Y3N9;Q9UPP1-5;Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1	H0Y589	PHF8	Histone lysine demethylase PHF8	1	SSGSSSSGLGTVSNS(0.966)PAS(0.034)QR;SSGSSSSGLGTVSNS(0.998)PAS(0.002)QR;SSGSSSSGLGTVS(0.009)NS(0.91)PAS(0.08)QR;SSGSSSSGLGTVSNS(1)PASQR	360.52	0.0	34040700.0	4589.18	4552.82	5908.200000000001	5313.54	4603.29	4312.52	3726.48	5123.120000000001	5385.139999999999	5858.6	True	False	4387.445142128979	5305.096120291886	4668.149560330191	4847.710198003053	5208.703321140795	5145.853455866433	4562.237999992911	4942.936965787942	5134.786016806473	4797.550769005278	0.9145177098435728	1.1057925962067185	0.9730276520446458	1.010455215882619	1.0857005109339917	1.0726001044348243	0.9509514791312658	1.0303042539376417	1.0702932108566547	1.0	12.228082358160304	-6.234298386438291	23.70926442056299	1.0318879428486374	0.914517380825631	0.3553280506346441	0.047941728407649195	5298.44037880656	4628359.315222268	0.011871155998795496	0.9116865004158805	5.830443800608591e-07	6.234298386438291	-0.11737056202300633	
SSHYDELLAAEAR	ddPTM_K562_Methotrexat_30min_R1	2	SSHYDELLAAEAR	13	0	Q7KZF4;H7C597	Q7KZF4	SND1	Staphylococcal nuclease domain-containing protein 1	0	;	174.72	8.110900000000002e-08	41716000.0	6122.4	6067.3	8013.4	8070.8	6380.5	6088.1	5770.1	6756.2	6927.7	8109.1	False	True	5853.266626754765	7069.818198533431	6331.4968495903895	7363.245494725372	7219.647586951692	7264.539161478777	7064.191806680592	6518.580616549385	6605.632739098746	6640.463411214409	0.8814545407884897	1.0646573530687524	0.9534721385404765	1.1088451270268773	1.0872204453019283	1.0939807527906005	1.0638100640311625	0.9816454384103392	0.9947547829181861	1.0	12.697068209627703	-5.568037859115901	1.7084634425324832	1.043670462813415	2.928850221626248e-12	0.4400774674714142	0.051755292747124766	9.54386317842654	4.70117824571252	0.014790915756791301	29.201077414058826	2.703722659959874e-06	5.568037859115901	-1.0436704628104863	
SSHYGGS(ph)LPNVNQIGSGLAEFQSPLHSPLDSSR	ddPTM_K562_Methotrexat_30min_R1	2	SSHYGGSLPNVNQIGSGLAEFQSPLHSPLDSSR	33	0	Q53ET0	Q53ET0	CRTC2	CREB-regulated transcription coactivator 2	1	S(0.002)S(0.002)HY(0.001)GGS(0.994)LPNVNQIGSGLAEFQSPLHSPLDSSR;S(0.054)S(0.054)HY(0.03)GGS(0.859)LPNVNQIGS(0.004)GLAEFQSPLHSPLDSSR	113.05	1.3557e-18	68253000.0	1800.17	1117.26	1429.9	2049.43	1368.76	1455.3000000000002	1582.84	2385.04	1949.37	2789.09	True	False	1721.0366822626968	1301.8682248270989	1129.7835307396738	1869.7596538453467	1548.7759315282503	1736.5161284637345	1937.8321622305182	2301.1567913464596	1858.7442141860818	2283.9587741653177	0.7535322886428442	0.5700051329967075	0.49466021169868	0.8186486004015805	0.678110283358445	0.7603097516934612	0.8484532138452049	1.0075299157654136	0.8138256413430087	1.0	11.157320894713093	-8.54289399096681	0.7688801073334753	0.9604660803293451	0.619888789295653	0.6202530323604178	0.09629432769060324	0.43334325300192444	0.5301636829936588	0.07442057428745044	0.05507858794057108	2.8648771862453625e-09	8.54289399096681	-0.34057729103369205	
SSKS(ph)AGALEEGTSEGQLCGR	ddPTM_K562_Methotrexat_30min_R1	1	SSKSAGALEEGTSEGQLCGR	20	1	H7BXQ8;C9J5N7;Q8N2F6-3;Q8N2F6	H7BXQ8	ARMC10	Armadillo repeat-containing protein 10	1	S(0.168)S(0.168)KS(0.662)AGALEEGT(0.001)SEGQLCGR	56.347	0.02925	28397000.0	1383.5	959.61	1397.5	1325.7	793.44	956.52	891.95	923.08	1100.3	1317.4	True	False	1322.6829965561255	1118.1692419189196	1104.1838479674757	1209.477939282032	897.7912673600738	1141.3539525858102	1091.9924926723545	890.6147531932758	1049.1472931608398	1078.8060941329934	1.2260618509196772	1.036487695054746	1.0235239251729271	1.121126350564469	0.8322081903714159	1.0579787774586913	1.0122231405727817	0.825555915967492	0.9725077554405275	1.0	10.075219861098534	-3.000000000471609	0.48375958225945687	0.949509780305956	8.273228006912833	0.44765745956315894	0.08452626677194058	92.50984329778647	1.029156136364287	0.04784493274800781	682.5326038586319	0.0009999999989140803	3.000000000471609	7.323718226606877	
SSLGQS(ph)ASETEEDTVSVSKK	ddPTM_K562_Methotrexat_30min_R1	1	SSLGQSASETEEDTVSVSKK	20	1	E9PPJ0;Q13435;E9PJ04;H0YCG1	E9PPJ0	SF3B2	Splicing factor 3B subunit 2	1	S(0.001)S(0.001)LGQS(0.412)AS(0.412)ET(0.15)EEDT(0.023)VS(0.001)VSKK	73.461	0.0062001999999999995	11207000.0	351.59	236.81	674.28	578.47	416.1	269.32	160.23	496.44	320.91	708.95	True	False	336.13452458197895	275.9388274182421	532.7578425814023	527.7564332326144	470.8244433713034	321.36227837411724	196.16565625975826	478.9799238151293	305.9909641445472	580.5522851340413	0.5789909594522916	0.4753040070362168	0.9176741806440328	0.9090592643361363	0.8109940403775978	0.553545798721504	0.3378948998787704	0.8250418370234124	0.527068744676284	1.0	9.181282193311342	-12.183333410874535	4.640535732827432	1.0000542341160368	0.6657716242471439	0.22792741831794994	0.18768201636215975	327134659.04717255	20.319783448802287	189576.16054120896	0.0485205914854902	6.556417323562736e-13	12.183333410874535	-0.3342826098688929	
SSLGQSAS(ph)ETEEDTVSVSKK	ddPTM_K562_Methotrexat_30min_R1	1	SSLGQSASETEEDTVSVSKK	20	1	E9PPJ0;Q13435;E9PJ04;H0YCG1	E9PPJ0	SF3B2	Splicing factor 3B subunit 2	1	S(0.002)S(0.002)LGQS(0.161)AS(0.418)ET(0.418)EEDTVSVSKK	83.73299999999999	0.0021027	15380000.0	462.55	564.97	982.39	713.63	273.85	468.85	288.71	416.71	377.3	780.72	True	False	442.2168558417314	658.3216896519754	776.1997641536807	651.0671658820526	309.866075023387	559.4486269705363	353.46056680243885	402.05407310652345	359.7594053527083	639.3240426685223	0.6916943933407063	1.0297152081191212	1.2140944377968996	1.0183680300282698	0.4846776506793235	0.8750627062849256	0.5528660635490938	0.628873695142701	0.5627184046623395	1.0	9.32040353918732	-7.741867174521332	24.97926939628624	0.6684699112701222	1.007530573096924	0.38175537539330606	0.18855202711628596	229.92569682086892	293444.34093163203	0.05451171997379756	0.07027043705904236	1.8118941611610972e-08	7.741867174521332	0.3390606618268017	
SSLSNNECGSLDKT(ph)SPEMSNSNNDER	ddPTM_K562_Methotrexat_30min_R1	1	SSLSNNECGSLDKTSPEMSNSNNDER	26	1	Q5UIP0-2;Q5UIP0	Q5UIP0-2	RIF1	Telomere-associated protein RIF1	1	SSLSNNECGSLDKT(0.614)S(0.38)PEMS(0.006)NSNNDER	112.61	1.3841000000000001e-08	39880000.0	1565.0	1357.2	2404.1	1868.8	1078.1	1093.8	1083.3	1462.1	1435.0	1995.3	True	False	1496.204473878088	1581.4542315444376	1899.5122639703811	1704.9652054991784	1219.8890468603752	1305.1613696925942	1326.2576011121278	1410.6771142738316	1368.2871632153087	1633.9318351476868	0.915708012839379	0.9678826236967799	1.1625407028064234	1.0434738884594112	0.7465972696162766	0.7987856908208316	0.8116970197794394	0.8633635038675431	0.8374199790847657	1.0	10.674132082622013	-7.748303117105354	24.99991687461507	0.8323718309186896	1.0285171277344485	0.5129249283771778	0.08519766208118254	179.33388792689527	341292.91556697123	0.0256551930084921	0.03291677923663759	1.7852411256499902e-08	7.748303117105354	0.19614529681575887	
SSLSNNECGSLDKTS(ph)PEMSNSNNDER	ddPTM_K562_Methotrexat_30min_R1	1	SSLSNNECGSLDKTSPEMSNSNNDER	26	1	Q5UIP0-2;Q5UIP0	Q5UIP0-2	RIF1	Telomere-associated protein RIF1	1	SSLSNNECGS(0.001)LDKT(0.246)S(0.643)PEMS(0.095)NS(0.015)NNDER	84.646	0.00037004	27590000.0	1340.5	968.91	2074.8	1483.2	1157.8	1046.8	1171.9	1439.0	1684.7	1863.7	True	False	1281.5732250693786	1129.0059088459484	1639.3278338196203	1353.1701588165581	1310.0709938363243	1249.0792848731094	1434.728406483247	1388.3895543670358	1606.378664716956	1526.16587037776	0.8397339043836439	0.7397661884330399	1.0741478797542827	0.886646848210292	0.8584066904287754	0.8184426798667267	0.9400868112246016	0.9097238912985116	1.0525583725177536	1.0	10.57569605375907	-9.548915399687862	2.000260170555087	1.0253664386537613	0.8770831733008513	0.3143652637583114	0.08352095467749554	0.4350892157275026	3.156484521116858	0.07451499752794456	0.023914507721966557	2.8254303134906607e-10	9.548915399687862	-0.14828326535291003	
SSLSTSS(ph)PESAR	ddPTM_K562_Methotrexat_30min_R1	1	SSLSTSSPESAR	12	0	D6REJ6;D6R9F1;D6REQ4;D6RDH3;D6RBZ2;D6RF08;D6RF67;D6RF51;D6RB63;D6R9D1;D6RC23;D6RAM4;D6RGK2;D6R9N9;D6RC13;Q8N7B6-2;Q8N7B6-3;Q8N7B6-4;Q8N7B6	D6REJ6	PACRGL	PACRG-like protein	1	SSLS(0.005)T(0.034)S(0.238)S(0.724)PESAR	137.01	6.7836e-06	7239400.0	2546.4	2009.3	2865.7	2601.0	2051.8	2156.4	1881.0	2510.7	2601.7	3262.1	True	False	2434.463304973268	2341.3026727396395	2264.228732107617	2372.974368313015	2321.647663804951	2573.093780951829	2302.862132088906	2422.397257921692	2480.7475348691787	2671.3020796047063	0.9113395761416525	0.8764649608950631	0.8476123870059177	0.8883212372088457	0.8691071225267432	0.9632357944828877	0.8620747723258909	0.9068226601613523	0.9286660441024606	1.0	11.383327414549521	-11.124480200007829	0.3360413534199266	1.028903732648477	0.8764761073011883	0.5621859879748424	0.02998441025096543	4.288603754450178	0.6410221356568122	0.18757934179200927	0.029189233545185593	7.50792282835877e-12	11.124480200007829	-0.1524276253472886	
SSMS(ph)GLHLVK	ddPTM_K562_Methotrexat_30min_R1	1	SSMSGLHLVK	10	0	Q13085-4;A0A0C4DGT1;Q13085-2;Q13085	Q13085-4	ACACA	Acetyl-CoA carboxylase 1;Biotin carboxylase	1	S(0.001)S(0.018)MS(0.982)GLHLVK	87.184	0.014813	110460000.0	7035.5	4293.9	5908.4	6309.5	4109.1	3492.3	4210.5	5334.1	5891.9	7327.1	True	False	6726.227844069836	5003.393991179383	4668.307583063354	5756.3559311307135	4649.518674013509	4167.137549257128	5154.811806039522	5146.496679603337	5617.986855016224	6000.09118894934	1.1210209365580739	0.8338863249935897	0.7780394390773933	0.9593780744086814	0.7749080018278311	0.6945123695673072	0.8591222439307905	0.8577364105868741	0.936316912210125	1.0	12.550768711524125	-12.676133040136994	15.735816096057613	1.0000011304182794	0.8588925001139566	0.10510768790843883	0.11226813719469564	4.469121879440221e-06	9.196030711500868e-08	0.10911289796459349	0.02646355319094861	2.1079822996509892e-13	12.676133040136994	-0.14110863030432286	
SSPGAVAGLSNAPGT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	SSPGAVAGLSNAPGTPR	17	0	V9GYB2;U3KPY3;Q9BWG4-2;Q9BWG4	V9GYB2	SSBP4	Single-stranded DNA-binding protein 4	1	SSPGAVAGLSNAPGT(0.999)PR	140.96	1.7779e-06	24711000.0	597.92	638.75	812.06	1044.9	459.42	443.5	620.63	777.04	580.38	711.39	True	False	571.6361527291928	744.2925806064023	641.6197034565066	953.2952393119074	519.8417826811921	529.2000982434315	759.822076043773	749.7110627695353	553.3982604786771	582.5503774899576	0.9812647537749593	1.2776450061080478	1.1013977987982118	1.6364168253042477	0.8923550696525873	0.9084194581138251	1.3043027786156938	1.2869463169860522	0.9499577750908196	1.0	9.186239005571307														
SSPHS(ph)TYYMGQSSSGGSIHSNLEQEK	ddPTM_K562_Methotrexat_30min_R1	2	SSPHSTYYMGQSSSGGSIHSNLEQEK	26	0	Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5	Q9ULH0-2	KIDINS220	Kinase D-interacting substrate of 220 kDa	1	S(0.064)S(0.064)PHS(0.268)T(0.268)Y(0.174)Y(0.141)MGQS(0.009)S(0.009)S(0.003)GGSIHSNLEQEK;S(0.001)S(0.001)PHS(0.298)T(0.298)Y(0.227)Y(0.174)MGQSSSGGSIHSNLEQEK	138.09	5.052999999999999e-16	22555000.0	2920.1000000000004	2065.46	3896.1000000000004	2261.55	1843.87	2012.28	1981.4	2575.61	2808.5	3130.8	True	False	2791.7359004290156	2406.7421581828576	3078.361853356768	2063.283422782893	2086.3712242226493	2401.1246306500393	2425.7793878367665	2485.0243364303547	2677.933448007107	2563.781781927719	1.0889132297093933	0.9387468836654334	1.2007113378589243	0.804781217078273	0.813786586256923	0.93655577380873	0.9461723321915535	0.9692807531231671	1.0445247200382075	1.0	11.324057755851001	-4.740163100872369	9.077370296802913	0.9677904036550096	1.0640540609623677	0.0	0.11332536123092271	0.0	0.0	0.026591521906751986	0.0	1.819017591643333e-05	4.740163100872369	0.09626365730735809	
SSPNVANQPPS(ph)PGGK	ddPTM_K562_Methotrexat_30min_R1	3	SSPNVANQPPSPGGK	15	0	A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6	A8MQ02	MLLT4	Afadin	1	SSPNVANQPPS(1)PGGK;SSPNVANQPPS(1)PGGK;SSPNVANQPPS(1)PGGK	216.71	5.7527e-27	142883000.0	18508.4	13000.099999999999	26767.0	21303.3	12788.099999999999	12988.300000000001	12117.900000000001	15473.699999999999	16655.8	21055.3	True	False	17694.79289733242	15148.145561082258	21148.972492697983	19435.672764507	14469.959298910268	15498.105154487406	14835.647544093647	14929.481200423354	15881.47549343663	17241.981139971464	1.0262621652166883	0.8785617753614668	1.2265975888158862	1.1272296731290339	0.8392283451328619	0.898858723291299	0.8604375230234245	0.865879685125793	0.9210934268231612	1.0	14.073637932201539	-7.76433136245109	24.999994748611186	0.8890834430337922	1.062936647637087	0.44345355385825025	0.09139193753502584	72.32960129469205	625260.4174622663	0.02906050648688706	0.03441062299711218	1.7205553071372725e-08	7.76433136245109	0.1738532046032948	
SSPSLS(ph)DSYSHLSGRPIR	ddPTM_K562_Methotrexat_30min_R1	1	SSPSLSDSYSHLSGRPIR	18	1	O75420	O75420	GIGYF1	PERQ amino acid-rich with GYF domain-containing protein 1	1	S(0.067)S(0.003)PS(0.388)LS(0.54)DS(0.001)YSHLSGRPIR	128.44	9.546899999999999e-07	30411000.0	472.59	498.6	601.43	529.77	487.23	470.2	433.38	396.79	421.65	595.44	True	False	451.815509463288	580.9851752490843	475.19806202724794	483.3258866209866	551.309285132901	561.0594953642874	530.5764969721904	382.83467079728695	402.0475835329166	487.60004606843006	0.9266108834614014	1.191519935105889	0.9745652525237013	0.9912342923633694	1.130658804440576	1.1506551319840277	1.0881387342972666	0.7851407601047677	0.824543776758571	1.0	8.929554452038618	-9.253202418088579	24.674076353879805	0.8536316991442613	1.0691839509088723	0.4723173378379246	0.09383966184054288	390.3110034654573	1169193.4001689616	0.04428261252202115	0.02499615602787391	5.58209960877111e-10	9.253202418088579	0.215552251764611	
SSPST(ph)ENMHFPSSISSQTR	ddPTM_K562_Methotrexat_30min_R1	1	SSPSTENMHFPSSISSQTR	19	0	A0A0U1RR27;Q7Z401;Q7Z401-2	A0A0U1RR27	DENND4A	C-myc promoter-binding protein	1	S(0.034)S(0.034)PS(0.424)T(0.507)ENMHFPSSISSQTR	75.956	0.024752	20961000.0	1791.2	1764.3	2034.9	1897.5	1761.7	1726.1	1656.5	1657.9	1950.8	2383.5	True	False	1712.4609927223205	2055.820587027595	1607.8022985538573	1731.1491210588033	1993.3944289527153	2059.644395891741	2028.0122922941368	1599.590717293335	1860.1077337982051	1951.825053412776	0.8773639777438422	1.0532811757042377	0.8237430376982849	0.886938672106847	1.0212976954400985	1.0552402697621093	1.0390338461677942	0.8195359079423858	0.9530094567368101	1.0	10.930608031269431	-7.753231769145376	24.99839890287828	0.9789080792894828	0.9143574853574511	0.15121496740766482	0.08208823188795798	435.8040248519023	1327347.4756292994	0.026005703226895768	0.03299680415409326	1.765095593938651e-08	7.753231769145376	-0.06455059393203166	
SSPSTENMHFPS(ph)SISSQTR	ddPTM_K562_Methotrexat_30min_R1	1	SSPSTENMHFPSSISSQTR	19	0	A0A0U1RR27;Q7Z401;Q7Z401-2	A0A0U1RR27	DENND4A	C-myc promoter-binding protein	1	SSPS(0.071)T(0.015)ENMHFPS(0.742)S(0.172)ISSQTR	130.56	4.5607e-07	19224000.0	4397.0	3788.2	5002.7	4327.2	3862.6	3868.5	3576.8	4226.5	4460.7	5642.8	True	False	4203.71314481914	4414.135661609664	3952.7016359405297	3947.841094411411	4370.599603378987	4616.032874982446	4378.988449790322	4077.851599396997	4253.323030630337	4620.834240150037	0.90973034875249	0.9552681252349658	0.8554086622705139	0.8543567869431357	0.9458464372955034	0.9989609310964085	0.9476618771003865	0.8824925083797402	0.920466480635374	1.0	12.173937622337334	-7.802453448774842	23.967962692008044	0.9457700917294565	0.8953549096357435	0.2950863117167677	0.04182206914427518	149.44098669329352	87329.73048760091	0.014080133950471842	0.01596562376860474	1.575964938468303e-08	7.802453448774842	-0.050415182093712985	
SSPVNNHHS(ph)PGQTPTLGQPEAR	ddPTM_K562_Methotrexat_30min_R1	1	SSPVNNHHSPGQTPTLGQPEAR	22	0	Q5SW79-2;H0Y2V6;Q5SW79-3;Q5SW79;E7EWM2;E7EMW0;Q96L14	Q5SW79-2	CEP170;CEP170P1	Centrosomal protein of 170 kDa;Cep170-like protein	1	S(0.02)S(0.02)PVNNHHS(0.959)PGQT(0.001)PTLGQPEAR	113.13	1.1608e-05	20144000.0	922.22	628.96	1168.0	1154.1	947.3	975.59	756.13	935.52	1107.2	1178.8	True	False	881.6803130350482	732.8849495079503	922.8527616644094	1052.9218448558454	1071.8865542072476	1164.108960192355	925.7114002851594	902.6172313422164	1055.7265136668923	965.307897194453	0.9133669325585568	0.7592240275232276	0.9560190736515943	1.0907626964578157	1.110408976578926	1.2059457542776688	0.9589804485963744	0.9350563006534608	1.0936681619773647	1.0	9.914845371436392	-6.9934795585891765	4.578067845312195	1.0567246309961191	0.8373013664656029	0.5343948812467751	0.08213027353157672	0.14756579049403387	8.086325639979199	0.023598716237396674	0.04823124313157112	1.0151271455419073e-07	6.9934795585891765	-0.2194232645305162	
SSQQPAASTQLPTT(ph)PSSNPSGLNQHTR	ddPTM_K562_Methotrexat_30min_R1	2	SSQQPAASTQLPTTPSSNPSGLNQHTR	27	0	C9JU75;H0Y2P2;A0A0C4DFP4;Q96IV0-3;Q96IV0-5;Q96IV0-2;Q96IV0	C9JU75	NGLY1	Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase	1	SSQQPAASTQLPT(0.013)T(0.977)PS(0.008)S(0.002)NPSGLNQHTR;SSQQPAAS(0.003)T(0.01)QLPT(0.052)T(0.933)PS(0.002)SNPSGLNQHTR	146.83	2.4974e-27	14722000.0	2191.87	1803.21	2237.98	2028.33	1679.1399999999999	1649.6599999999999	1716.1599999999999	1752.01	1834.8600000000001	1797.15	True	False	2095.518019271032	2101.15980317068	1768.2585818062626	1850.5094580854836	1899.9763418468888	1968.4334477300106	2101.052565978573	1690.3908152512788	1749.5577590921557	1471.6687202604442	1.4239060669171413	1.4277396633114778	1.201533033530352	1.2574225656967115	1.2910353503406977	1.3375520051697865	1.4276667955589526	1.1486218277114206	1.1888258104599336	1.0	10.523237234979446	-9.83346868103692	1.3559258247237354	1.0124945381720942	1.329668063581293	0.6147264141726174	0.08269573302057126	0.2844119524645905	1.113673444919323	0.08230312349640993	0.025498563113698663	1.4673418998335598e-10	9.83346868103692	0.31717352540919874	
SSQQPST(ph)PQQAPPGQPQQGTFVAHK	ddPTM_K562_Methotrexat_30min_R1	4	SSQQPSTPQQAPPGQPQQGTFVAHK	25	0	E7ERS3;Q86VM9;H3BRH3	E7ERS3	ZC3H18	Zinc finger CCCH domain-containing protein 18	1	S(0.029)S(0.029)QQPS(0.256)T(0.686)PQQAPPGQPQQGTFVAHK;S(0.017)S(0.017)QQPS(0.227)T(0.74)PQQAPPGQPQQGTFVAHK;S(0.03)S(0.03)QQPS(0.252)T(0.689)PQQAPPGQPQQGTFVAHK;S(0.006)S(0.006)QQPS(0.24)T(0.747)PQQAPPGQPQQGTFVAHK	176.0	9.9656e-25	55003900.0	17597.7	14676.2	27185.6	19415.4	14442.800000000001	14360.2	12295.5	18329.6	19141.399999999998	24242.8	True	False	16824.126178891027	17101.192597253525	21479.714073205458	17713.28202635316	16342.281352374566	17135.105413292727	15053.07886501815	17684.937578683825	18251.520491964813	19852.194002464963	0.8474693616636049	0.8614258250312354	1.0819818741716112	0.8922581566628746	0.8231977458181909	0.8631340904267374	0.7582576950008182	0.8908303826009337	0.9193704479060903	1.0	14.277010837877945	-6.5432630886862935	24.998439584910052	0.8952725329356588	0.8509580298597968	0.045381307559609674	0.08452848051385384	843.92884675183	1034953.8864323427	0.022825250774238918	0.060404679124996294	2.8624434219033516e-07	6.5432630886862935	-0.04431450307586193	
SSQSEGIFLGSES(ph)DEDSVR	ddPTM_K562_Methotrexat_30min_R1	2	SSQSEGIFLGSESDEDSVR	19	0	Q9BYW2;H7BZ93;C9JG86;H7BXT4;Q9BYW2-3;Q9BYW2-2	Q9BYW2	SETD2	Histone-lysine N-methyltransferase SETD2	1	SSQSEGIFLGS(0.418)ES(0.582)DEDSVR;SSQSEGIFLGS(0.037)ES(0.963)DEDSVR	221.05	6.069399999999997e-105	9994300.0	1988.56	1795.51	2393.65	2066.1	1676.76	1861.8200000000002	1777.28	1990.0300000000002	1987.8000000000002	2468.88	True	False	1901.1452834345127	2092.1875090483004	1891.2555761626836	1884.968220827192	1897.2833301304156	2221.5903650768564	2175.880281828266	1920.0395169402584	1895.3876118741416	2021.7419080636603	0.9403501385868536	1.0348440128305545	0.9354584621407235	0.9323485917312441	0.9384399277490143	1.0988496386289992	1.0762403812028771	0.9496956605995233	0.9375022619427543	1.0	10.981383121802978														
SSQTGTEPGAAHTS(ph)SPQPSTSR	ddPTM_K562_Methotrexat_30min_R1	2	SSQTGTEPGAAHTSSPQPSTSR	22	0	A0A075B6T1;Q9C0C7-4;Q9C0C7-2;Q9C0C7-3;Q9C0C7;Q9C0C7-5;H0YE34	A0A075B6T1	AMBRA1	Activating molecule in BECN1-regulated autophagy protein 1	1	SSQTGTEPGAAHT(0.001)S(0.669)S(0.256)PQPS(0.025)T(0.025)S(0.025)R;SSQTGTEPGAAHT(0.003)S(0.619)S(0.371)PQPS(0.003)T(0.003)S(0.003)R	149.44	5.832e-17	14435900.0	2593.56	2285.14	2955.1	2890.2	2137.3599999999997	2364.01	2356.3	2569.99	2777.8599999999997	3214.1	True	False	2479.550207841059	2662.7205442613163	2334.864893830903	2636.8206533249836	2418.4603034945653	2820.821475193809	2884.760256162196	2479.601995015802	2648.717894919359	2631.9953447342155	0.9420800127180504	1.011673728674548	0.8871082916245365	1.0018333271753015	0.9188695216855661	1.071742577674909	1.0960354705541873	0.9420996887310975	1.0063535637396168	1.0	11.361941222012293	-8.255527168167319	24.98387956310562	1.024176816435755	0.9547394445727774	0.32092501266315177	0.05152207764794195	629.7428826344362	2661176.0876681036	0.017483694639560544	0.017047661346017675	5.552298825078886e-09	8.255527168167319	-0.0694373718629776	
SSRPDTLLSPEQPVCPAGGSGGPPS(ph)SASPEVEAGPQGCATEPRPHR	ddPTM_K562_Methotrexat_30min_R1	4	SSRPDTLLSPEQPVCPAGGSGGPPSSASPEVEAGPQGCATEPRPHR	46	2	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	SSRPDTLLSPEQPVCPAGGS(0.023)GGPPS(0.326)S(0.326)AS(0.326)PEVEAGPQGCATEPRPHR;SSRPDTLLSPEQPVCPAGGS(0.027)GGPPS(0.323)S(0.323)AS(0.323)PEVEAGPQGCAT(0.004)EPRPHR;SSRPDTLLSPEQPVCPAGGS(0.024)GGPPS(0.324)S(0.324)AS(0.324)PEVEAGPQGCAT(0.005)EPRPHR;SSRPDTLLSPEQPVCPAGGS(0.017)GGPPS(0.305)S(0.305)AS(0.305)PEVEAGPQGCAT(0.068)EPRPHR	89.17	8.780900000000002e-22	386900000.0	5510.3	5309.39	6708.23	6206.780000000001	5047.110000000001	5104.81	4869.07	5763.54	5784.139999999999	6147.509999999999	True	False	5268.073809846924	6186.676453300712	5300.264196387022	5662.641234047624	5710.893430386297	6091.242285262803	5961.082892870878	5560.833031394428	5515.236593895612	5034.136368410137	1.0464702233544516	1.2289449471656975	1.0528646442013117	1.124848597582981	1.134433597433494	1.209987540958593	1.1841321840777796	1.1046250288906319	1.0955675790795898	1.0	12.297528582480869	-12.02283591149614	5.767174134701047	0.9999996878031652	1.1348664578983731	0.31172108816436606	0.05832558063868707	2.2914717447686867e-07	3.877323846908594e-08	0.05527187411626257	0.013405367573771448	9.487768698119282e-13	12.02283591149614	0.13486677009520798	
SSRPDTLLSPEQPVCPAGGSGGPPSSASPEVEAGPQGCAT(ph)EPRPHR	ddPTM_K562_Methotrexat_30min_R1	1	SSRPDTLLSPEQPVCPAGGSGGPPSSASPEVEAGPQGCATEPRPHR	46	2	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	SSRPDTLLSPEQPVCPAGGS(0.1)GGPPS(0.16)S(0.16)AS(0.16)PEVEAGPQGCAT(0.418)EPRPHR	45.083999999999996	0.00095001	99626000.0	944.3	782.15	938.32	1061.0	1018.5	785.04	927.87	1240.0	994.32	1052.8	True	False	902.7897026728937	911.3869932231669	741.3794549014974	967.9837773087704	1152.4506021958002	936.7378695039986	1135.9684670395172	1196.38849716131	948.0942802287434	862.1277181594171	1.0471646876176155	1.0571368650214783	0.8599415600327653	1.1227846604623137	1.3367515948288988	1.0865418774655209	1.3176336209961224	1.3877160796030505	1.0997144161573402	1.0	9.751757800047635	-7.518650044416353	24.03332097849431	1.2243864174930554	0.9943826778784773	0.3672341096566496	0.12557447384077206	102.45252000927943	582279.5969657371	0.035542564659785995	0.047106962648164434	3.029353505517792e-08	7.518650044416353	-0.2300037396145781	
SSRVQDGMGLYTAR	ddPTM_K562_Methotrexat_30min_R1	1	SSRVQDGMGLYTAR	14	1	Q9NQX1-3;Q9NQX1-4;Q9NQX1-2;Q9NQX1	Q9NQX1-3	PRDM5	PR domain zinc finger protein 5	0		69.352	0.024059	2135200.0	336.27	441.43	715.7	689.14	599.85	668.74	485.44	740.5	599.1	482.04	False	True	321.4879734383291	514.3688044729304	565.4843506191929	628.7241661588747	678.7407891282775	797.9645404719556	594.3122771936411	714.4561952806042	571.2479717646634	394.73788493689705	0.8144340477725422	1.3030641955107947	1.4325565703165062	1.5927636797754612	1.719472123221163	2.021504828703023	1.5055871247033916	1.8099509131098919	1.4471577053111668	1.0	8.624751178191653	-6.1978274478211794	1.142745217166983	1.6380423475885022	0.3460450501157201	0.4438744922282989	0.2560033262268607	1.5074998415285306	1.5033088248587014	0.07535936310410407	2.4175921747563383	6.341216079204679e-07	6.1978274478211794	-1.291997297472782	
SSS(ph)AGPEGPQLDVPR	ddPTM_K562_Methotrexat_30min_R1	1	SSSAGPEGPQLDVPR	15	0	O75081;O75081-2;O75081-4	O75081	CBFA2T3	Protein CBFA2T3	1	SS(0.012)S(0.988)AGPEGPQLDVPR	202.01	5.388e-13	80916000.0	1095.0	861.33	1477.6	1025.9	887.49	872.87	766.03	896.13	940.51	1151.7	True	False	1046.8651111159788	1003.6501423932875	1167.471952598742	935.9609398125045	1004.2104908618068	1041.5397739656005	937.8317272961527	864.6125999686806	896.7858953837151	943.1159697988228	1.1100067697287397	1.064185290603633	1.2378880116384594	0.9924134144522603	1.0647794364843766	1.1043602349218755	0.9943970384641061	0.9167617002107515	0.9508755276140745	1.0	9.881291371880499	-8.881965199700552	3.722111754344468	0.9507342403742377	1.0947483953344728	0.5287063280887228	0.06076647619646724	0.18210194887499748	4.777424820309377	0.027330388532263498	0.01779215554330461	1.3123050506638915e-09	8.881965199700552	0.14401415496023506	
SSS(ph)AGPEGPQLDVPREFLPR	ddPTM_K562_Methotrexat_30min_R1	3	SSSAGPEGPQLDVPREFLPR	20	1	O75081;O75081-2;O75081-4	O75081	CBFA2T3	Protein CBFA2T3	1	S(0.048)S(0.048)S(0.903)AGPEGPQLDVPREFLPR;S(0.132)S(0.021)S(0.846)AGPEGPQLDVPREFLPR;S(0.023)S(0.023)S(0.953)AGPEGPQLDVPREFLPR	166.59	3.9798000000000004e-13	107363000.0	1018.9000000000001	967.69	1413.58	1651.93	806.2	1152.44	1065.65	1474.0900000000001	1175.06	1510.3400000000001	True	False	974.1103759964117	1127.584324582403	1116.8888757136776	1507.1078616867833	912.2294310164499	1375.1327197737546	1304.6491393197985	1422.245419177835	1120.4317170785937	1236.802790506168	0.7876036369531086	0.9116929014373691	0.9030452423676898	1.2185514725997597	0.7375706442602019	1.1118447745504958	1.0548562384677866	1.1499371040356188	0.905909758353675	1.0	10.2723997640867	-6.621430229083134	1.5588371815231619	1.0249811383842096	0.7812945340875825	0.23962160576836056	0.1296320761316519	0.810447075179519	3.020015267884021	0.03654586833475848	0.24780165082433492	2.3909460182735083e-07	6.621430229083134	-0.24368660429662703	
SSS(ph)APNVHINTIEPVNIDDLIR	ddPTM_K562_Methotrexat_30min_R1	4	SSSAPNVHINTIEPVNIDDLIR	22	0	H7C560;P15056;A0A2R8Y679;A0A2R8Y492;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0	H7C560	BRAF	Serine/threonine-protein kinase B-raf	1	S(0.152)S(0.152)S(0.695)APNVHINTIEPVNIDDLIR;S(0.148)S(0.148)S(0.704)APNVHINTIEPVNIDDLIR;S(0.145)S(0.145)S(0.711)APNVHINTIEPVNIDDLIR;S(0.146)S(0.146)S(0.708)APNVHINTIEPVNIDDLIR	164.82	1.6542e-20	588008100.0	10841.18	9210.07	12319.100000000002	10864.49	9938.35	9554.26	9033.539999999999	11739.880000000001	11538.099999999999	12798.699999999999	True	False	10364.614708062401	10731.877523077277	9733.489260462356	9912.017029908917	11245.417223694287	11400.485525689486	11059.541299686556	11326.98176617267	11001.696249403882	10480.73140806129	0.9889209354311306	1.023962651578192	0.9287032442197507	0.9457371479136518	1.0729611117640927	1.0877566728712047	1.0552260972149399	1.080743444819174	1.0497069165365587	1.0	13.355451779818228	-7.7680003146137295	24.999591736257543	1.0631454587485578	0.9724741279732059	0.6189238479291455	0.03285534358656918	99.14015412823092	377760.6133733772	0.010298683082103657	0.011949467355037713	1.706081153075035e-08	7.7680003146137295	-0.09067133077535194	
SSS(ph)APNVHINTIEPVNIDDLIRDQGFR	ddPTM_K562_Methotrexat_30min_R1	1	SSSAPNVHINTIEPVNIDDLIRDQGFR	27	1	H7C560;P15056;A0A2R8Y679;A0A2R8Y492;A0A2R8YDP5;A0A2U3TZI2;A0A2R8Y8E0	H7C560	BRAF	Serine/threonine-protein kinase B-raf	1	S(0.146)S(0.146)S(0.708)APNVHINTIEPVNIDDLIRDQGFR	66.501	0.00065021	3022600.0	550.31	524.29	824.16	569.93	519.74	787.29	603.72	565.51	684.13	678.55	True	False	526.1190313225882	610.9200110937469	651.1800788127905	519.9651217734095	588.0949199658762	939.4226501602507	739.1195780886302	545.6206927658803	652.324945624035	555.6580197160642	0.9468396255513954	1.0994532417725582	1.171908000437998	0.9357646309849114	1.0583756539073923	1.6906489546219208	1.3301699100218385	0.9819361431059469	1.1739683806909986	1.0	9.118053437737695	-8.047299385975695	24.99802935570989	1.2550722472777833	1.0454613539461275	0.19258400916736695	0.19551809165055462	687.0132681822224	363089.1153555425	0.06774091461304996	0.06774288635624756	8.968103546639407e-09	8.047299385975695	-0.20961089333165583	
SSS(ph)ASSPEMK	ddPTM_K562_Methotrexat_30min_R1	4	SSSASSPEMK	10	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	SS(0.005)S(0.993)AS(0.002)SPEMK;SS(0.006)S(0.993)AS(0.001)SPEMK;SS(0.003)S(0.994)AS(0.002)SPEMK;S(0.001)S(0.092)S(0.907)ASSPEMK	110.08	0.0024225	29757900.0	20010.1	15023.8	28724.200000000004	21610.300000000003	14891.9	14525.400000000001	13512.7	18198.600000000002	18353.6	23870.1	True	False	19130.47996341722	17506.227589063754	22695.38295941853	19715.758551155253	16850.445874167537	17332.227975253987	16543.266949642613	17558.544922935333	17500.3451420129	19546.99358400181	0.9786916786566356	0.8955969373925452	1.1610677039354793	1.0086338068526082	0.8620479564672668	0.8866953324955049	0.8463330628594675	0.8982734274444168	0.8952959986816598	1.0	14.254659111123729	-7.751797989051133	24.375384735365717	0.8898619595957192	1.0134739837930997	0.36783846343980775	0.07198695993196443	153.07501650474663	387001.949405311	0.02152609817768664	0.02741149230576564	1.7709325114181253e-08	7.751797989051133	0.12361202419738049	
SSS(ph)EDAESLAPR	ddPTM_K562_Methotrexat_30min_R1	1	SSSEDAESLAPR	12	0	H0YA82;Q4G0J3;Q4G0J3-3	H0YA82	LARP7	La-related protein 7	1	S(0.33)S(0.052)S(0.618)EDAESLAPR	190.35	6.806399999999999e-05	63075000.0	1252.1	933.63	1276.6	1179.5	840.54	1026.5	1038.7	1409.7	1191.7	1120.5	True	False	1197.0591832222076	1087.8964885034134	1008.6591057712201	1076.0950662918888	951.0857429255348	1224.8565971744817	1271.6549157898696	1360.1200519744332	1136.2981271105818	917.5665921330042	1.3046019694761184	1.1856321904380314	1.0992761881472377	1.1727705384198484	1.0365304829970008	1.3348966796264252	1.3858993196708924	1.4823120889925332	1.2383821913885371	1.0	9.841669054710149	-8.290433723121385	24.441352314599687	1.3245426773626139	1.1585618282345151	0.16010233619295644	0.1349753571862945	740.9322705104148	624580.4703764649	0.04605668042294255	0.04062627209516785	5.123494530022895e-09	8.290433723121385	-0.16598084912809874	
SSS(ph)ELNGVSTTSVVK	ddPTM_K562_Methotrexat_30min_R1	1	SSSELNGVSTTSVVK	15	0	Q99963-2;Q99963-4;Q99963;Q99963-3	Q99963-2	SH3GL3	Endophilin-A3	1	SS(0.005)S(0.995)ELNGVSTTSVVK	205.12	2.4296999999999997e-13	14599000.0	1642.4	1397.5	2619.8	2008.1	1530.4	1343.4	1439.8	1884.1	1753.3	2307.2	True	False	1570.2020625542311	1628.4131215615616	2069.9397816852897	1832.0529907763814	1731.6744247427118	1602.9930371594717	1762.711801053485	1817.8351350819544	1671.7894656901767	1889.3437227748927	0.8310833246626316	0.8618935252130299	1.0955866615128953	0.969676914100962	0.9165481134366537	0.8484390732275778	0.9329757099277719	0.9621516260747339	0.8848519438457749	1.0	10.883669475553216														
SSS(ph)ESYTQSFQSR	ddPTM_K562_Methotrexat_30min_R1	3	SSSESYTQSFQSR	13	0	Q9BTU6;E9PAM4	Q9BTU6	PI4K2A	Phosphatidylinositol 4-kinase type 2-alpha	1	S(0.001)S(0.001)S(0.997)ES(0.002)YTQSFQSR;S(0.037)S(0.006)S(0.946)ES(0.006)YT(0.006)QSFQSR;S(0.003)S(0.005)S(0.991)ES(0.001)YTQSFQSR	259.27	3.5191999999999995e-88	128096900.0	2748.84	2272.69	3505.55	2968.1499999999996	2456.96	2396.2	2488.7	2951.13	2648.2	2862.84	True	False	2628.00428496808	2648.213393375133	2769.7829611752313	2707.9368978501643	2780.093305420708	2859.23173711592	3046.854326491047	2847.337085183594	2525.0857600186628	2344.3519345132063	1.1209939285475807	1.1296142675459784	1.1814706317762669	1.1550897533703508	1.1858685824822548	1.2196256436683968	1.2996573942827025	1.2145518952447	1.0770932993654747	1.0	11.194973448306396	-9.945697459842474	3.905170093680716	1.0013123104023773	1.189339023975924	0.6221050167446209	0.048436083329982546	0.13834586705999852	4.34697959031104	0.05306692597788256	0.013993064485619912	1.1331894958560489e-10	9.945697459842474	0.18802671357354672	
SSS(ph)ETILSSLAGSDIVK	ddPTM_K562_Methotrexat_30min_R1	4	SSSETILSSLAGSDIVK	17	0	Q01850	Q01850	CDR2	Cerebellar degeneration-related protein 2	1	SS(0.121)S(0.879)ETILSSLAGSDIVK;S(0.088)S(0.105)S(0.803)ET(0.004)ILSSLAGSDIVK;S(0.001)S(0.067)S(0.931)ETILSSLAGSDIVK;S(0.084)S(0.084)S(0.832)ETILSSLAGSDIVK	366.63	0.0	46107600.0	9896.900000000001	7109.0	12501.7	9797.599999999999	6724.4	6303.4	6407.59	7820.6	9442.8	10891.6	True	False	9461.844126213457	8283.641417660927	9877.764015838991	8938.659619755328	7608.776464806513	7521.4428393859025	7844.655166906725	7545.545065241721	9003.806289065877	8919.025698238132	1.06086073146785	0.9287607971908053	1.1074936153385284	1.002201352724107	0.8530950265464033	0.8433031918353695	0.8795417159136968	0.8460055302601349	1.0095055888048952	1.0	13.122670405447648	-7.661474395864174	5.837974980795921	0.8935079552498812	1.0267563172423801	0.4098411734341235	0.0698912345190065	0.19148926766561739	9.427263274551443	0.020223877195595107	0.0261383418576867	2.1803469372799642e-08	7.661474395864174	0.1332483619924989	
SSS(ph)FGNFDR	ddPTM_K562_Methotrexat_30min_R1	6	SSSFGNFDR	9	0	Q9NSI8;A0A2R8Y4K8;Q9NSI8-3	Q9NSI8	SAMSN1	SAM domain-containing protein SAMSN-1	1	SS(0.001)S(0.999)FGNFDR;SS(0.001)S(0.999)FGNFDR;SS(0.002)S(0.998)FGNFDR;SS(0.001)S(0.999)FGNFDR;S(0.003)S(0.003)S(0.995)FGNFDR;SS(0.006)S(0.994)FGNFDR	182.28	9.1669e-08	2149601000.0	20809.9	18032.5	26061.700000000004	21854.7	19388.0	18618.8	17881.6	20749.699999999997	23319.600000000002	23409.7	True	False	19895.121713070705	21012.064124907967	20591.705324203205	19938.732382610713	21937.861831489598	22216.6195922769	21892.00398785803	20019.92128995808	22235.47688593431	19169.976485369025	1.0378271318306065	1.096092326505714	1.0741643496495301	1.0401020782591164	1.1443864758119597	1.1589278478892837	1.1419943057607045	1.0443372898885794	1.1599115368193043	1.0	14.226560946891334	-7.758299493404075	24.999906211330742	1.1146965903852637	1.0653438820499708	0.1559971933449943	0.05113783597503768	144.98092886240738	1154339.8859500154	0.014884834837836034	0.01839206259414994	1.744618633194963e-08	7.758299493404075	-0.04935270833529293	
SSS(ph)FGNFDRFR	ddPTM_K562_Methotrexat_30min_R1	1	SSSFGNFDRFR	11	1	Q9NSI8;A0A2R8Y4K8;Q9NSI8-3	Q9NSI8	SAMSN1	SAM domain-containing protein SAMSN-1	1	S(0.068)S(0.068)S(0.865)FGNFDRFR	76.868	0.027634	95516000.0	4001.8	3148.0	3476.9	4592.7	3107.6	3140.2	3695.7	3566.2	3706.1	4788.4	True	False	3825.885663620025	3668.153493149051	2747.146204649814	4190.065121626753	3516.303869792504	3746.999207449883	4524.554801467817	3440.7747246585996	3533.80421992492	3921.174359455312	0.9756989393737331	0.9354731916737802	0.7005927186138743	1.0685740386736573	0.8967476443156565	0.9555808704131119	1.1538774832997531	0.8774857757502412	0.9012106823058484	1.0	11.937070079010534	-7.305007781137108	24.999967126581865	0.9768383585005922	0.8770759785218545	0.18658026497568447	0.10345760627896458	830.2932368018693	476428.1362902354	0.029554729466605017	0.04383708617832836	4.954413140368607e-08	7.305007781137108	-0.09976237997873771	
SSS(ph)FGSVSTSSNSSK	ddPTM_K562_Methotrexat_30min_R1	2	SSSFGSVSTSSNSSK	15	0	E5RG30;E5RJ65;E5RHF1;E5RGS8;E5RH07;E5RGQ6;A0A0C4DGW2;P57768-2;P57768	E5RG30	SNX16	Sorting nexin-16	1	S(0.001)S(0.011)S(0.986)FGS(0.002)VSTSSNSSK;S(0.105)S(0.105)S(0.79)FGSVSTSSNSSK	144.68	6.782e-21	11475000.0	4045.8	3762.2000000000003	6446.6	4849.6	4294.799999999999	3520.4	3554.7	4685.799999999999	3880.7000000000003	4764.5	True	False	3867.9514763041343	4383.839603534101	5093.546758001525	4424.443097489736	4859.641478949947	4200.667476564098	4351.931962220325	4520.997758063275	3700.287104034599	3901.602881051045	0.9913749795217893	1.1235996428096617	1.3055010756577523	1.1340065179308674	1.2455500026801336	1.0766517261317197	1.1154215574722885	1.158753952130918	0.9484017766148937	1.0	11.929851227474659	-9.758342435559898	24.997225364769328	0.9742008394535558	1.1484436433558656	0.4054883691693244	0.08202130416064886	73.11319788815364	590179.4601566904	0.06221187397344899	0.021249974745524442	1.7444461373779813e-10	9.758342435559898	0.17424280390230973	
SSS(ph)FSLPSR	ddPTM_K562_Methotrexat_30min_R1	2	SSSFSLPSR	9	0	Q14153-2;Q14153	Q14153-2	FAM53B	Protein FAM53B	1	S(0.104)S(0.064)S(0.767)FS(0.066)LPSR;S(0.009)S(0.006)S(0.89)FS(0.096)LPSR	119.22	0.0046989	119494000.0	4110.6	3138.2	4421.700000000001	3823.3	3017.3	2963.8999999999996	3060.5	3575.5	3901.8	4461.7	True	False	3929.9029458934656	3656.734209720568	3493.6455961057504	3488.1172250561917	3414.127837020509	3536.631727584459	3746.89503203514	3449.747638387306	3720.406169640067	3653.6428952430397	1.0756122200694846	1.0008460910291899	0.9562088294546788	0.954695717416073	0.9344448636361332	0.9679741093988888	1.0255230572515757	0.9441939831828664	1.01827307055212	1.0	11.835119917412804	-6.321259597725471	2.900362137801564	0.9726455661072776	1.0866188900358984	0.5132734820932452	0.0292824183626587	0.26731404537842274	3.428387150873721	0.007548127714583534	0.06621221015604485	4.772439178083839e-07	6.321259597725471	0.1139733239286208	
SSS(ph)KESLVR	ddPTM_K562_Methotrexat_30min_R1	2	SSSKESLVR	9	1	E7EVX2;Q13439-5;Q86W71;Q13439-3;Q13439-4;Q13439	E7EVX2	GOLGA4	Golgin subfamily A member 4	1	SS(0.001)S(0.995)KES(0.005)LVR;S(0.018)S(0.098)S(0.761)KES(0.122)LVR	109.39	0.011233	50844000.0	6574.3	4733.9	10471.2	7691.6	4634.799999999999	4484.0	4117.1	6027.299999999999	6301.2	8071.6	True	False	6285.301643844548	5516.096512458158	8273.43821741469	7017.289369979391	5244.357438445842	5350.469538948243	5040.464478481248	5815.316442693839	6008.258587353528	6609.755024596834	0.9509129491872392	0.8345387222266404	1.2517011881116327	1.061656497686526	0.7934268999274635	0.8094807627571036	0.7625796205342261	0.8798081655149614	0.9089986792241223	1.0	12.690381087204639	-7.7579865313280765	24.999464352903473	0.8457375400779709	1.0273334486432626	0.32510189281649327	0.11595463305684875	104.93360588704957	759739.2954078	0.03629773149439437	0.04496261840784709	1.7458762965290775e-08	7.7579865313280765	0.18159590856529173	
SSS(ph)LDMNR	ddPTM_K562_Methotrexat_30min_R1	3	SSSLDMNR	8	0	Q96D71-3;Q96D71;E9PMG1;H0YDT0;Q96D71-4	Q96D71-3	REPS1	RalBP1-associated Eps domain-containing protein 1	1	SS(0.023)S(0.976)LDMNR;S(0.003)S(0.055)S(0.942)LDMNR;S(0.013)S(0.153)S(0.834)LDMNR	91.265	0.016512	47150800.0	17303.1	13246.8	18613.2	16958.4	14773.900000000001	13194.3	12911.5	16479.7	15822.9	18552.1	True	False	16542.47644214694	15435.608542899252	14706.543684428067	15471.68340161456	16716.9268058719	15743.91173901536	15807.232545702238	15900.099610217127	15087.29683264079	15192.13491647542	1.0888842505082756	1.0160262943794551	0.9680366693215222	1.018400869046784	1.1003671898505119	1.036319900104465	1.0404878993379505	1.0466007376602442	0.9930991868877537	1.0	13.891037002318122	-6.254884214956158	24.08601288446703	1.0271321717853736	1.088884297268256	0.24083098098321976	0.034046198904274065	740.8747048257269	2722111.166936466	0.009040020746649098	0.08209792145933285	5.560524838362723e-07	6.254884214956158	0.061752125482882336	
SSS(ph)LIQLTSQNSSPNQQR	ddPTM_K562_Methotrexat_30min_R1	2	SSSLIQLTSQNSSPNQQR	18	0	H7C419;O95639	H7C419	CPSF4	Cleavage and polyadenylation specificity factor subunit 4	1	SS(0.002)S(0.997)LIQLTSQNSSPNQQR;S(0.03)S(0.059)S(0.91)LIQLTSQNSSPNQQR	349.2	0.0	137078000.0	3368.4	2364.1	3601.6	3108.0	2718.0	2234.4	2684.2	2955.5	3026.2	3134.8	True	False	3220.3291692082767	2754.7273421707973	2845.6733787761455	2835.526465481299	3075.4646409113234	2666.1661770352266	3286.2001780717924	2851.5533898066533	2885.5126225241606	2567.0573431669277	1.254482755432109	1.0731070536867497	1.1085351818691727	1.1045824406801783	1.1980506197485965	1.0386079547977805	1.2801428790903722	1.1108257466071048	1.1240546029113478	1.0	11.325899807992071	-10.325465016911943	1.9972666302714386	1.0001402265305184	1.1433262579299845	0.2616850413981797	0.07324493731860712	2.213308904005302	11.685634645290845	0.06666192767653205	0.018469205934997797	4.726449076387869e-11	10.325465016911943	0.14318603139946617	
SSS(ph)LPAYGR	ddPTM_K562_Methotrexat_30min_R1	1	SSSLPAYGR	9	0	Q08495-3;Q08495-2;Q08495;Q08495-4	Q08495-3	DMTN	Dematin	1	SS(0.002)S(0.998)LPAYGR	134.23	0.00050632	16679000.0	2270.6	1790.4	2809.4	2339.4	1790.5	1818.1	1966.6	2128.7	2370.1	2518.7	True	False	2170.787142739673	2086.233168403449	2219.7453327225944	2134.3084341528147	2025.9821337570743	2169.4220938362637	2407.660111093057	2053.832414441355	2259.9145683181923	2062.539023297989	1.0524829437013976	1.011487852999539	1.0762197988250586	1.0347966317456951	0.9822757828443602	1.0518211143309033	1.1673282705910801	0.99577869375644	1.0956954233547547	1.0	11.010205700110673	-8.521631530124289	24.99896479969558	1.0708096485069092	1.031419506873426	0.08284750728951029	0.050846152884191226	106.07190640563392	2126202.4997569886	0.018603761413085763	0.014626053372303122	3.0086278399459488e-09	8.521631530124289	-0.0393901416334832	
SSS(ph)MAAGLER	ddPTM_K562_Methotrexat_30min_R1	2	SSSMAAGLER	10	0	I3L3C6;B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-6;Q9UQB8-2;Q9UQB8;I3L0Y9	I3L3C6	BAIAP2	Brain-specific angiogenesis inhibitor 1-associated protein 2	1	S(0.016)S(0.029)S(0.955)MAAGLER;S(0.001)S(0.007)S(0.992)MAAGLER	107.34	0.0029238000000000003	57886000.0	12829.7	9859.599999999999	9344.099999999999	12630.400000000001	9350.8	9263.5	10470.099999999999	11174.1	11821.6	14817.599999999999	True	False	12265.721749849017	11488.731315455001	7382.901104681852	11523.112441961071	10580.59410015953	11053.540270750911	12818.286448263716	10781.100569459824	11272.016396283005	12133.989054520296	1.0108565035568122	0.9468222909905365	0.6084479779493033	0.9496557471896141	0.8719798619084729	0.910956835471441	1.056395089089725	0.8885042273417514	0.928962136494084	1.0	13.566766294648673	-8.528073570216694	24.888351484396654	0.9626743262216318	0.8725574839102656	0.13415596008483677	0.10823802012866166	299.90840166109183	1436836.5641706446	0.04238144556707697	0.03294285402996367	2.964329184631822e-09	8.528073570216694	-0.0901168423113663	
SSS(ph)MS(ph)SIDLVSASDDVHR	ddPTM_K562_Methotrexat_30min_R1	1	SSSMSSIDLVSASDDVHR	18	0	A0A0A0MRE4;A0A2R8YFA1;A0A2U3TZL3;Q9Y5P4;Q9Y5P4-3	A0A0A0MRE4	COL4A3BP	Collagen type IV alpha-3-binding protein	2	S(0.273)S(0.336)S(0.407)MS(0.492)S(0.492)IDLVSASDDVHR	95.624	0.0012844000000000002	13309000.0	751.87	575.49	650.7	726.77	496.27	509.12	502.17	797.31	775.12	750.74	True	False	718.8186950637178	670.5799408425496	514.126962341636	663.0552024832181	561.5382035853797	607.5002345382097	614.7944055667652	769.2681553803898	739.0848403842864	614.7737111806618	1.1692411077292804	1.0907752375336819	0.8362865115918253	1.0785353869634935	0.9134063369543823	0.9881688554501078	1.000033661794132	1.2513029451162188	1.2022063190777745	1.0	9.26391166391176	-9.243398686405303	24.019071788167672	1.170065967298618	1.0052505068967157	0.2607434280242107	0.10650640429443653	548.1308046239334	729774.0547439549	0.05001845449195228	0.02879135979889366	5.709542546572015e-10	9.243398686405303	-0.16481546040190231	
SSS(ph)MSS(ph)LTGAYTSGIPSSSR	ddPTM_K562_Methotrexat_30min_R1	2	SSSMSSLTGAYTSGIPSSSR	20	0	A8CG34-2;A8CG34	A8CG34-2	POM121C	Nuclear envelope pore membrane protein POM 121C	2	S(0.01)S(0.014)S(0.976)MS(0.196)S(0.646)LT(0.147)GAYT(0.012)SGIPSSSR;S(0.013)S(0.017)S(0.947)MS(0.099)S(0.912)LT(0.012)GAYTSGIPSSSR	138.28	4.1768999999999995e-09	25904000.0	6451.5	4597.6	4582.3	6264.7	4020.7000000000003	3928.3999999999996	4337.1	4850.2	5430.8	6136.400000000001	True	False	6167.89978480798	5357.275254162032	3620.537850834606	5715.4834775742265	4549.492524544578	4687.507702231108	5309.805078725567	4679.615716880469	5178.323293372618	5025.038497068242	1.227433339745858	1.0661162610570303	0.7204995251174566	1.1374009335269393	0.9053647105786132	0.9328302071647692	1.0566695323475566	0.9312596748484012	1.0305042033794978	1.0	12.29491893355399	-6.520080724791886	24.996330511037048	0.9631242418076092	1.18710415769931	0.36847454290542836	0.10525464650382604	92.41850323787095	825613.3647752604	0.025290998450743132	0.06977633999690733	3.019390436920772e-07	6.520080724791886	0.22397991589170074	
SSS(ph)MSSIDLVSASDDVHR	ddPTM_K562_Methotrexat_30min_R1	1	SSSMSSIDLVSASDDVHR	18	0	A0A0A0MRE4;A0A2R8YFA1;A0A2U3TZL3;Q9Y5P4;Q9Y5P4-3	A0A0A0MRE4	COL4A3BP	Collagen type IV alpha-3-binding protein	1	S(0.003)S(0.003)S(0.757)MS(0.228)S(0.009)IDLVSASDDVHR	115.37	0.00040884	15099000.0	1126.7	725.98	1187.9	1112.9	724.83	991.45	844.83	902.69	1149.2	1239.9	True	False	1077.1716170724876	845.93585544992	938.5760236139995	1015.3337848887184	820.1578497688574	1183.0336807293127	1034.3046332018453	870.9418810504371	1095.7739428341695	1015.3420951233486	1.0608952610613742	0.833153534668679	0.9243938847034376	0.9999918153352745	0.8077650416623579	1.165157720153021	1.0186760089723188	0.857781712423369	1.079216500622925	1.0	9.98775017540809	-8.247850474915396	24.988613808568086	1.0149346082822102	0.9242298934705819	0.1970970061692885	0.0989492388689454	1473.8495221480314	2710261.1022921	0.03232309658747116	0.03215110699585927	5.651315128407567e-09	8.247850474915396	-0.09070471481162823	
SSS(ph)MSSLTGAYASGIPSSSR	ddPTM_K562_Methotrexat_30min_R1	5	SSSMSSLTGAYASGIPSSSR	20	0	Q96HA1-2;Q96HA1-3;Q96HA1	Q96HA1-2	POM121	Nuclear envelope pore membrane protein POM 121	1	S(0.002)S(0.03)S(0.898)MS(0.055)S(0.016)LTGAYASGIPSSSR;SS(0.004)S(0.937)MS(0.04)S(0.018)LTGAYASGIPSSSR;S(0.003)S(0.039)S(0.765)MS(0.16)S(0.033)LT(0.001)GAYASGIPSSSR;S(0.012)S(0.012)S(0.892)MS(0.079)S(0.005)LTGAYASGIPSSSR;S(0.008)S(0.026)S(0.915)MS(0.049)S(0.002)LTGAYASGIPSSSR	123.68	1.3544000000000001e-05	133681600.0	13776.7	12218.2	17433.0	14455.099999999999	11856.82	12796.0	11581.600000000002	12676.64	13406.899999999998	14843.099999999999	True	False	13171.092763754807	14237.049876109819	13774.051536040799	13187.843825990578	13416.199655500437	15268.645901066406	14179.068617225337	12230.795386012047	12783.616145304071	12154.870757420249	1.083606154817745	1.1713040936629007	1.13321250475922	1.0849842905931126	1.1037714775626206	1.2561750927499804	1.1665338858966776	1.006246436519734	1.05172785465448	1.0	13.569246932840388	-9.263394029665038	24.992098405561332	1.0217403517166015	1.1441619229633762	0.5681065904300873	0.04931164237306942	139.88832490415723	1788581.5443337483	0.026953653156059888	0.013957161409323885	5.4526292672761e-10	9.263394029665038	0.12242157124677466	
SSS(ph)MSSLTGAYTSGIPSSSR	ddPTM_K562_Methotrexat_30min_R1	2	SSSMSSLTGAYTSGIPSSSR	20	0	A8CG34-2;A8CG34	A8CG34-2	POM121C	Nuclear envelope pore membrane protein POM 121C	1	S(0.038)S(0.038)S(0.401)MS(0.401)S(0.122)LTGAYTSGIPSSSR;S(0.016)S(0.016)S(0.78)MS(0.126)S(0.062)LT(0.002)GAYTSGIPSSSR	115.12	9.012399999999999e-05	66532000.0	6067.5	5718.1	8072.2	6545.3	5464.3	6050.400000000001	5476.299999999999	5366.4	5853.7	6728.0	True	False	5800.7799650193665	6662.918833918547	6377.955533139932	5971.4837112338255	6182.95122786304	7219.554170038465	6704.499677808863	5177.660670295521	5581.562764678368	5509.494004347031	1.0528698207934357	1.2093522252064266	1.1576299979830598	1.083853382274721	1.1222357666574547	1.3103842502309984	1.2168993509238715	0.9397706334212016	1.013080831066242	1.0	12.427704111454899	-9.262814636420778	24.996615595322286	0.9823192916243515	1.1670434633940745	0.5777675702337525	0.07067110675260431	92.26632615346377	1676989.4101946212	0.038181053751070365	0.019932446252671463	5.459908486766699e-10	9.262814636420778	0.184724171769723	
SSS(ph)PAPADIAQTVQEDLR	ddPTM_K562_Methotrexat_30min_R1	14	SSSPAPADIAQTVQEDLR	18	0	Q13283	Q13283	G3BP1	Ras GTPase-activating protein-binding protein 1	1	S(0.014)S(0.025)S(0.96)PAPADIAQTVQEDLR;S(0.16)S(0.116)S(0.723)PAPADIAQTVQEDLR;SS(0.074)S(0.926)PAPADIAQTVQEDLR;SSS(1)PAPADIAQTVQEDLR;S(0.003)S(0.09)S(0.907)PAPADIAQTVQEDLR;SSS(1)PAPADIAQTVQEDLR;S(0.163)S(0.163)S(0.675)PAPADIAQTVQEDLR;S(0.004)S(0.241)S(0.754)PAPADIAQTVQEDLR;SS(0.002)S(0.998)PAPADIAQTVQEDLR;SS(0.022)S(0.978)PAPADIAQTVQEDLR;SS(0.067)S(0.933)PAPADIAQTVQEDLR;SS(0.004)S(0.996)PAPADIAQTVQEDLR;SS(0.006)S(0.994)PAPADIAQTVQEDLR;SS(0.02)S(0.98)PAPADIAQTVQEDLR	361.23	0.0	24882352600.0	21916.870000000003	21596.909999999996	28664.219999999998	25787.389999999996	21076.769999999997	19898.500000000004	18240.989999999994	23451.08	25507.729999999996	26037.629999999994	True	False	20953.430637319165	25165.432292797217	22647.99194174331	23526.64955620584	23848.73468713045	23743.603505968276	22331.99634386624	22626.29222420132	24321.881199834163	21321.962897206668	0.9827158380462343	1.1802587038594872	1.0621907584648485	1.1033997981155854	1.11850558985143	1.1135749377501665	1.0473705658118322	1.0611730417730691	1.1406961599684853	1.0	14.380052638083283	-12.046683725584318	5.018829150279637	0.9999984984238143	1.0916508698988283	0.21061977965151002	0.05217379556305015	8.166394609934864e-07	1.549966334861046e-07	0.04694535710824408	0.011385734563156722	8.980825839346819e-13	12.046683725584318	0.09165237147501404	
SSS(ph)PELVTHLK	ddPTM_K562_Methotrexat_30min_R1	1	SSSPELVTHLK	11	0	E9PNR6;H0YE29;Q07960	E9PNR6	ARHGAP1	Rho GTPase-activating protein 1	1	S(0.12)S(0.428)S(0.452)PELVTHLK	95.428	0.0081294	29124000.0	6580.0	5120.9	9425.0	5833.8	5432.3	4809.0	3765.5	6312.8	6307.2	7363.2	True	False	6290.751078669533	5967.041684582902	7446.821300245767	5322.359811558812	6146.742666969312	5738.27118929574	4610.009228272605	6090.7752458709	6013.979648663139	6029.653129133188	1.0433023167244582	0.9896160785356344	1.2350331172891713	0.8826975113780625	1.0194189508630918	0.9516751737459671	0.76455629031107	1.010136920885613	0.9974005999790735	1.0	12.557859294536483	-7.291640567329361	24.962587355271936	0.9426434855770123	1.0793471660476073	0.3309200175960745	0.09258354718748138	792.8349444913101	655310.2195210581	0.026310177931072373	0.03902967104300418	5.1092768120993507e-08	7.291640567329361	0.136703680470595	
SSS(ph)PGKLLGSGYGGLTGGSSR	ddPTM_K562_Methotrexat_30min_R1	2	SSSPGKLLGSGYGGLTGGSSR	21	1	H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-4;Q7Z460-5;Q7Z460-3;Q7Z460	H0Y5T1;Q7Z460	CLASP1	CLIP-associating protein 1	1	S(0.149)S(0.149)S(0.702)PGKLLGSGYGGLTGGSSR;S(0.059)S(0.059)S(0.882)PGKLLGSGYGGLTGGSSR	117.31	3.1378000000000003e-05	90805000.0	4298.6	3006.5	6248.6	4765.799999999999	2615.6	3021.3	2581.2	3759.8	3731.1	4828.5	True	False	4109.638690998308	3503.273023237809	4937.104252171429	4347.989713381843	2959.5972460513844	3605.1234652150606	3160.0998061392243	3627.5657029250747	3557.641975381632	3954.011860878366	1.039359221872787	0.8860046824592915	1.248631624254833	1.0996400279932284	0.7485048983626273	0.9117634423115257	0.799213537370933	0.9174392567753268	0.8997550084716534	1.0	11.94910148339859	-7.7434290887845965	24.98884534167941	0.8729222217389617	1.0682531252908438	0.4397748622385681	0.10432773229086473	229.40944134252243	318298.7953003879	0.03106052483970133	0.040015655119032136	1.8053894954525094e-08	7.7434290887845965	0.1953309035518821	
SSS(ph)PGKPQAVSSLNSSHSR	ddPTM_K562_Methotrexat_30min_R1	1	SSSPGKPQAVSSLNSSHSR	19	1	Q9UHB7;Q9UHB7-3;Q9UHB7-2	Q9UHB7	AFF4	AF4/FMR2 family member 4	1	S(0.045)S(0.045)S(0.869)PGKPQAVS(0.027)S(0.008)LNS(0.002)S(0.002)HS(0.003)R	70.699	0.013201	20493000.0	1561.4	761.43	1943.2	1628.2	1084.4	887.33	1123.9	1153.1	1519.0	1719.3	True	False	1492.7627255675711	887.2433654029477	1535.3488753992121	1485.4582339435808	1227.017607286329	1058.7939643164468	1375.9631846117597	1112.5448194166975	1448.3820215498652	1407.918109642369	1.0602624650852412	0.6301810874698671	1.0905100693599377	1.0550743141736476	0.8715120566195491	0.7520280881857506	0.9773034206948824	0.7902056318455194	1.028740245352604	1.0	10.459347707949355	-9.807155678477757	24.999683222398794	1.0143707451267672	0.9019278206211175	0.0896710533989502	0.14138765444335963	368.77472984171436	201653.00638260916	0.13300110211773525	0.03434127587664777	1.5589935612342087e-10	9.807155678477757	-0.11244292450564963	
SSS(ph)PRGEASSLNGESH	ddPTM_K562_Methotrexat_30min_R1	4	SSSPRGEASSLNGESH	16	1	Q8IY57-3;Q8IY57;Q8IY57-5	Q8IY57-3	YAF2	YY1-associated factor 2	1	S(0.186)S(0.186)S(0.624)PRGEASS(0.005)LNGESH;S(0.067)S(0.067)S(0.846)PRGEAS(0.015)S(0.004)LNGESH;S(0.004)S(0.079)S(0.506)PRGEAS(0.057)S(0.354)LNGESH;S(0.04)S(0.04)S(0.855)PRGEAS(0.009)S(0.057)LNGESH	142.95	1.2881e-06	166002000.0	6163.6	6047.5	7037.7	7289.900000000001	5357.6	5531.1	5043.77	6178.6	6272.700000000001	6655.5	True	False	5892.655524086256	7046.746585075885	5560.582945860969	6650.805785299911	6062.218307633008	6599.906794575526	6174.963814973982	5961.295135936183	5981.083546132877	5450.124456886397	1.0811965067404485	1.2929514987813	1.0202671498326987	1.2203034697485518	1.112308233617163	1.2109644186632003	1.132995010264716	1.0937906433318063	1.09742146137151	1.0	12.412073459741135	-9.988505344454296	0.9280537441621073	1.0020543444292267	1.1578395222097948	0.29017144491372104	0.0730307732571712	0.7076593202166002	1.3787250827517943	0.06417387866989971	0.022235789914652356	1.0268207954712036e-10	9.988505344454296	0.1557851777805681	
SSS(ph)PTLTPSQEGSPVFAGFEGR	ddPTM_K562_Methotrexat_30min_R1	1	SSSPTLTPSQEGSPVFAGFEGR	22	0	P0C860	P0C860	MSL3P1	Putative male-specific lethal-3 protein-like 2	1	S(0.072)S(0.072)S(0.414)PT(0.022)LT(0.032)PS(0.332)QEGS(0.057)PVFAGFEGR	81.665	0.023447	0.0	481.17	329.01	257.48	302.81	188.06	121.32	216.77	317.37	194.0	307.05	True	False	460.0183429366902	383.3733102862036	203.43846667239055	276.26311744285465	212.7931863023486	144.76337298510282	265.3861905225478	306.2079172129717	184.98098234409065	251.44026962466663	1.829533286865207	1.5247092713449515	0.8090926205896534	1.0987226423804028	0.846297160832639	0.5757366280317627	1.0554641502679691	1.2178157367952978	0.7356855869595511	1.0	7.97407191405696	-6.625609211267819	3.743103893799148	0.921707488746144	1.775977172494673	0.7454275982173643	0.1809090672054209	0.10738677281487735	2.7700578154473	0.048764503305902	0.1537725911655784	2.368049567654008e-07	6.625609211267819	0.8542696837485289	
SSS(ph)PVGLAK	ddPTM_K562_Methotrexat_30min_R1	2	SSSPVGLAK	9	0	B1AKL4;Q9NRA8-2;Q9NRA8;Q9NRA8-3	B1AKL4	EIF4ENIF1	Eukaryotic translation initiation factor 4E transporter	1	S(0.375)S(0.049)S(0.575)PVGLAK;S(0.002)S(0.072)S(0.926)PVGLAK	137.46	0.00011705	116307000.0	18003.0	13807.099999999999	26549.0	20676.0	14262.7	12809.2	12214.1	15487.199999999999	16232.0	21353.4	True	False	17211.609676183536	16088.488594427648	20976.727713551714	18863.36718156091	16138.495045594533	15284.396614249756	14953.42284292775	14942.506397771469	15477.377862934432	17486.09234132341	0.9843028013473765	0.9200734092205998	1.1996235238892787	1.0787640150442706	0.9229331934531644	0.8740887509858009	0.855160921665133	0.8545366286588286	0.8851250216926997	1.0	14.09392030233293	-7.878555236927495	4.6538696872647325	0.8839520906027167	1.047150776665357	0.4641438586297292	0.07737278744008447	0.1912167217204176	6.9363857539202325	0.025565951072462914	0.029340103699726727	1.3226494725329325e-08	7.878555236927495	0.1631986860626402	
SSS(ph)PVQVEEEPVR	ddPTM_K562_Methotrexat_30min_R1	2	SSSPVQVEEEPVR	13	0	Q8IZ21-3;A0A0J9YVR0;Q8IZ21;Q8IZ21-2	Q8IZ21-3	PHACTR4	Phosphatase and actin regulator 4	1	S(0.05)S(0.082)S(0.867)PVQVEEEPVR;S(0.007)S(0.007)S(0.987)PVQVEEEPVR	257.81	4.7709999999999994e-88	588340000.0	3719.9	3562.2000000000003	4956.0	4621.0	3708.2000000000003	3037.7	2865.3	3483.6	3729.8	3992.3	True	False	3556.377650082495	4150.793002952841	3915.8033277472723	4215.884104565342	4195.893297066729	3624.6925331095213	3507.9164630910886	3361.079813476723	3556.4024120978847	3269.255783822035	1.0878248400389126	1.2696446156012346	1.1977659708135069	1.2895546825756834	1.2834398941282523	1.1087209973127128	1.0730015315565304	1.0280871353379815	1.0878324142444893	1.0	11.674746541429359	-8.463738230526257	3.648936451088327	1.0520531879730373	1.2296210537958696	0.6732915290465284	0.05886336580698476	0.1435420649883941	3.8017286926043194	0.022292074362873553	0.018657410995770327	3.4376508866682373e-09	8.463738230526257	0.17756786582283235	
SSS(ph)PVT(ph)ELASRSPIR	ddPTM_K562_Methotrexat_30min_R1	1	SSSPVTELASRSPIR	15	1	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	S(0.313)S(0.195)S(0.532)PVT(0.937)ELAS(0.016)RS(0.006)PIR	96.70700000000001	0.01655	17071000.0	2370.8	2387.7	2723.4	2290.2	2329.7	2107.3	1884.5	2257.8	2251.1	2397.0	True	False	2266.5824707157644	2782.2268410393867	2151.7955574630596	2089.4217217648857	2636.096384816449	2514.5059008531757	2307.147096183701	2178.3918942667765	2146.44685234424	1962.8800725951005	1.1547228495315776	1.417420697211031	1.0962440281021326	1.064467336001066	1.3429737362055425	1.2810287984271893	1.175388720072668	1.109793677505091	1.0935191009945138	1.0	10.938756314848888	-9.587014881525668	1.3120415567929045	1.015493205756569	1.225973422915593	0.3400523820961139	0.10229158889570585	0.5211826141332467	1.6454904657755927	0.09776270305003126	0.0322826908286143	2.5881242290227333e-10	9.587014881525668	0.21048021715902387	
SSS(ph)PVTELASR	ddPTM_K562_Methotrexat_30min_R1	3	SSSPVTELASR	11	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	S(0.006)S(0.072)S(0.921)PVT(0.001)ELASR;S(0.115)S(0.115)S(0.77)PVTELASR;S(0.06)S(0.06)S(0.881)PVTELASR	203.03	4.977399999999999e-11	259883000.0	6290.0	5621.5	7604.3	5974.4	5695.400000000001	5718.0	5878.900000000001	6523.8	7244.5	7543.5	True	False	6013.499131433342	6550.357325837792	6008.261348908103	5450.6336278543995	6444.444928567465	6822.922574421519	7197.392976255966	6294.354256274956	6907.704776246206	6177.299051990462	0.9734835695700469	1.0603918105158145	0.9726356613692044	0.8823651861403868	1.0432463888065968	1.104515503782033	1.1651359138808095	1.0189492532738522	1.1182403050440615	1.0	12.592760459999695	-7.992374851196712	24.97992778329876	1.086242784637085	0.9765792181403392	0.4264581058650847	0.05956010899156804	177.3582312607764	581019.2263470783	0.018736255346682492	0.02120757983267896	1.017712593861571e-08	7.992374851196712	-0.1096635664967458	
SSS(ph)SASQSNHSCTSMPSSPATPASGTK	ddPTM_K562_Methotrexat_30min_R1	1	SSSSASQSNHSCTSMPSSPATPASGTK	27	0	Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;H3BQK9;H3BPE1;A0A590UJG2;H0Y390;Q9UPN3-5;H0Y6T5;H0Y4F5;H0Y314	Q9UPN3	MACF1	Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5	1	S(0.152)S(0.152)S(0.402)S(0.176)AS(0.028)QS(0.028)NHS(0.028)CT(0.028)S(0.004)MPS(0.001)S(0.001)PATPASGTK	65.06	0.0083375	35658000.0	1670.3	1290.0	1797.2	1553.5	1164.6	1106.2	949.3	1484.5	1679.6	2105.8	True	False	1596.875611960749	1503.1505737491332	1419.9922801911616	1417.3070669643485	1317.7653130262436	1319.9574941981598	1162.2046900542255	1432.2892935773907	1601.5157626037874	1724.4192143807938	0.9260367772775929	0.871685122279785	0.8234611794795234	0.8219040098513843	0.7641792100416998	0.7654504677229147	0.6739687660413545	0.8305922838442151	0.9287276256538705	1.0	10.751894827643396	-9.867740916889964	2.9547909499481597	0.9956192248181525	0.8041103344975541	0.5022668857036157	0.06366645028560168	0.2123916061416809	3.5713157750584066	0.0671135164862275	0.01825674135009336	1.3559981065697397e-10	9.867740916889964	-0.19150889032059837	
SSS(ph)SPELQTLQDILGDPGDKADVGR	ddPTM_K562_Methotrexat_30min_R1	1	SSSSPELQTLQDILGDPGDKADVGR	25	1	P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4;A0A2R8Y670	P49815	TSC2	Tuberin	1	S(0.141)S(0.141)S(0.576)S(0.141)PELQTLQDILGDPGDKADVGR	105.61	1.5005999999999998e-07	5235100.0	1604.4	1258.9	2295.9	1720.9	1251.1	1207.5	803.3	1658.1	1420.9	1808.8	True	False	1533.872497054316	1466.9118273587474	1814.0219653298936	1570.0313688696156	1415.6415791921108	1440.832285521857	983.4604735284516	1599.783683179974	1354.8426691377238	1481.208792369636	1.035554545014838	0.9903477719788468	1.2246902493927432	1.0599662768392573	0.9557339832741399	0.972740840416438	0.6639580311666343	1.0800527862251224	0.9146871636984061	1.0	10.532559303063922	-7.82753987001065	2.955982805445568	0.9184919842166042	1.0841845620988277	0.2843245698207111	0.11466222675240292	0.3337602060204811	5.919198710925205	0.03773762973754207	0.04530531921592325	1.4875108082315882e-08	7.82753987001065	0.16569257788222358	
SSS(ph)TGNLLDKDDLAIPPPDYGAASR	ddPTM_K562_Methotrexat_30min_R1	1	SSSTGNLLDKDDLAIPPPDYGAASR	25	1	I3L3C6;B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-6;Q9UQB8-2;Q9UQB8	I3L3C6	BAIAP2	Brain-specific angiogenesis inhibitor 1-associated protein 2	1	S(0.169)S(0.169)S(0.641)T(0.022)GNLLDKDDLAIPPPDYGAASR	106.37	1.363e-07	18267000.0	1496.3	1239.2	2202.2	1801.3	1210.4	1096.5	998.53	1531.1	1622.5	2426.8	True	False	1430.5244436190324	1443.9567372014947	1739.9883148436306	1643.3828256986676	1369.5888158053956	1308.3831064800959	1222.4757707361696	1477.2503451642579	1547.0703291406546	1987.2830038271968	0.7198393187402427	0.7265984434127698	0.8755614129908447	0.8269495701084189	0.6891765355854105	0.6583778475236564	0.615149311085473	0.7433517734108853	0.7784851609766896	1.0	10.95658162234531	-12.888471287553688	4.7844656243469545	1.077167675486962	0.7363421475180707	0.5410746831214648	0.07264632894944965	0.05078616831472138	0.00118385476979967	0.05973937131081806	0.0192843252493009	1.2927921681572943e-13	12.888471287553688	-0.3408255279688912	
SSS(ph)TSDILEPFTVER	ddPTM_K562_Methotrexat_30min_R1	3	SSSTSDILEPFTVER	15	0	A0A1B0GUI1;Q6GYQ0-3;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-2	A0A1B0GUI1	RALGAPA1	Ral GTPase-activating protein subunit alpha-1	1	S(0.001)S(0.028)S(0.971)TSDILEPFTVER;SS(0.002)S(0.997)TSDILEPFTVER;S(0.001)S(0.052)S(0.896)T(0.052)SDILEPFTVER	337.22	0.0	73121200.0	6282.6	5240.2	7862.400000000001	7187.7	5842.0	6024.4	6298.1	6385.6	6946.9	8524.1	True	False	6006.424426572831	6106.053981829618	6212.189686053299	6557.56550062417	6610.325398161871	7188.53003801066	7710.60924726695	6161.014828607466	6623.940135289497	6980.302889782181	0.8604819191105703	0.8747548750023019	0.8899599034802269	0.9394385321334957	0.9469969287204018	1.029830675189365	1.104623877934265	0.8826285801474324	0.9489473794877397	1.0	12.769073923977512	-7.471049980447607	1.5086059270901495	0.9903595286685364	0.8680070773465279	0.46586569093393104	0.05403919623051371	0.3997323596671736	1.824043898611958	0.020145913923308636	0.03653414755841205	3.380259325120429e-08	7.471049980447607	-0.12235245132200845	
SSS(ph)VGSSSSYPIS(ph)PAVSR	ddPTM_K562_Methotrexat_30min_R1	3	SSSVGSSSSYPISPAVSR	18	0	Q15149-4;H0YDN1;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149	Q15149-4	PLEC	Plectin	2	S(0.012)S(0.017)S(0.968)VGS(0.002)SSSYPIS(0.747)PAVS(0.252)R;S(0.019)S(0.031)S(0.95)VGSSSSYPIS(1)PAVSR;S(0.012)S(0.056)S(0.931)VGSSSSYPIS(0.997)PAVS(0.003)R	231.38	5.741599999999999e-46	27876000.0	5228.93	4867.9	7068.400000000001	5297.74	5018.200000000001	5173.0	5240.6	5718.6	5896.9	6993.1	True	False	4999.072498143998	5672.237734847607	5584.839435401292	4833.295359471972	5678.181258653868	6172.60903768494	6415.937952910749	5517.473596666667	5622.754406107567	5726.581825475509	0.872959236503863	0.9905102044667999	0.9752483428345238	0.8440105296270062	0.991548087795354	1.077887163023711	1.1203782899544965	0.9634846344326043	0.981869215784877	1.0	12.483458541461985	-7.9923515621574825	24.929800808869054	1.0324531212945118	0.928093865308275	0.42820997106622216	0.058645421788818056	185.76083637435423	605475.4200009193	0.01912002997253938	0.021636117428169087	1.0177671701571944e-08	7.9923515621574825	-0.10435925598623685	
SSS(ph)VGSSSSYPISPAVSR	ddPTM_K562_Methotrexat_30min_R1	4	SSSVGSSSSYPISPAVSR	18	0	Q15149-4;H0YDN1;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149	Q15149-4	PLEC	Plectin	1	S(0.074)S(0.074)S(0.851)VGS(0.002)SSSYPISPAVSR;S(0.046)S(0.081)S(0.873)VGSSSSYPISPAVSR;S(0.059)S(0.059)S(0.882)VGSSSSYPISPAVSR;S(0.001)S(0.062)S(0.936)VGSSSSYPISPAVSR	354.71	0.0	710980000.0	8731.400000000001	8677.900000000001	10626.0	8121.0	8752.9	8410.5	7477.9	9777.900000000001	8923.9	11300.8	True	False	8347.578110683158	10111.775475920625	8395.747812881858	7409.044538665899	9904.059770210717	10035.710093069632	9155.009429849883	9434.005714833529	8509.029836806343	9254.115613009064	0.9020395313571044	1.0926787495183115	0.9072447507657515	0.8006215665006997	1.0702329843694613	1.0844591220539577	0.9892905829899227	1.0194389295905903	0.9194860095377122	1.0	13.175879407476355														
SSS(ph)VTSIDKESR	ddPTM_K562_Methotrexat_30min_R1	2	SSSVTSIDKESR	12	1	H0Y332;Q5T5C0-3;Q5T5C0-2;Q5T5C0;Q5JRH0	H0Y332	STXBP5	Syntaxin-binding protein 5	1	SS(0.001)S(0.868)VT(0.011)S(0.12)IDKESR;S(0.138)S(0.047)S(0.752)VT(0.062)S(0.001)IDKESR	104.94	0.0098522	32375000.0	4201.9	3256.2000000000003	7483.900000000001	4826.7	3967.2000000000003	4033.0	3410.8	4836.4	4334.7	6782.5	True	False	4017.1895072129973	3794.231704063511	5913.131663544753	4403.55070493519	4488.956336800373	4812.320171850642	4175.758724151427	4666.301070702385	4133.180743128505	5554.123526231233	0.723280547910117	0.6831377959355719	1.0646381261810225	0.7928434944123817	0.8082204717989713	0.8664409693307732	0.7518303661108704	0.8401507544195218	0.7441643534948685	1.0	12.439343548368983	-13.48769816733434	2.2185055832926963	3.2626858333785314	0.8126877259603212	0.2462377733714769	0.10035551269923187	5149502.6902893735	457876.59137700975	58670299.980252065	0.026638690032031447	3.2531331009038404e-14	13.48769816733434	-2.4499981074182102	
SSSASS(ph)PEMK	ddPTM_K562_Methotrexat_30min_R1	1	SSSASSPEMK	10	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	SSS(0.003)AS(0.258)S(0.74)PEMK	89.266	0.013479	0.0	5251.0	3538.2	8073.5	5561.9	4645.0	3941.1	3700.6	4936.1	4572.9	6182.0	True	False	5020.172327369869	4122.82741088309	6378.982680905489	5074.29686240683	5255.898917230721	4702.661797490844	4530.553751200532	4762.494565191883	4360.30687712006	5062.379895195207	0.9916625048496661	0.8144049826833695	1.2600758562114023	1.0023540246797624	1.038226886571509	0.9289428875051875	0.8949454298166283	0.940761986217599	0.8613156198053218	1.0	12.305600060057978	-8.301783808691814	6.370622054911752	0.9190199255665946	1.0220699010933052	0.16954855590993256	0.10600157854795285	0.39149504844710536	45.45386151984052	0.03780055718359554	0.03368043742634519	4.99132893423823e-09	8.301783808691814	0.10304997552671058	
SSSCGDTELLGQATLPVGS(ph)PSRPLSR	ddPTM_K562_Methotrexat_30min_R1	2	SSSCGDTELLGQATLPVGSPSRPLSR	26	1	O14523-2;O14523;E9PK05	O14523-2	C2CD2L	C2 domain-containing protein 2-like	1	SSSCGDTELLGQAT(0.001)LPVGS(0.733)PS(0.15)RPLS(0.116)R;SSSCGDTELLGQAT(0.001)LPVGS(0.417)PS(0.417)RPLS(0.164)R	82.885	0.00035941	53004000.0	1540.31	1526.87	2290.2	1537.1	1525.8400000000001	1689.49	1390.74	1589.78	1455.46	1745.23	True	False	1472.5998167151179	1779.1593151475506	1809.518317434785	1402.3448295017063	1726.5147048153547	2015.9600315249052	1702.6488471990037	1533.8665363041173	1387.7959822810826	1429.1519353755302	1.0304011632802157	1.2449056472641944	1.2661483168053145	0.981242648027636	1.2080693886208034	1.410598818519028	1.1913700741353355	1.0732704468549537	0.9710625916875796	1.0	10.480943584413412	-9.448762240999004	3.107475847074205	0.9899576360200997	1.196141222141221	0.3515183325277297	0.11307585082033268	0.3063624922757515	5.634140901898971	0.08300862215274818	0.03209122575883599	3.558260659118702e-10	9.448762240999004	0.20618358612112142	
SSSFS(ph)LPSR	ddPTM_K562_Methotrexat_30min_R1	2	SSSFSLPSR	9	0	Q14153-2;Q14153	Q14153-2	FAM53B	Protein FAM53B	1	S(0.013)S(0.009)S(0.253)FS(0.724)LPS(0.001)R;S(0.001)SS(0.033)FS(0.967)LPSR	118.03	0.0045405	109334000.0	3705.8	2693.0	4211.6	4271.8	3526.2	3143.8	2916.9	3568.5	3649.2	4249.1	True	False	3542.8974691996286	3137.9724768266824	3327.642714919371	3897.2979263973652	3989.95710698363	3751.2948564998865	3571.0890766029374	3442.993832354947	3479.549488505439	3479.546815379158	1.0182065818285497	0.9018336706829866	0.9563437112590668	1.120059057453057	1.146688726632021	1.0780986880014478	1.0263086735373625	0.9894949012145341	1.0000007682397802	1.0	11.764683702868284	-7.195420001507018	10.786437385385563	1.0550885791875493	0.9529305654403877	0.3639305875882366	0.05587850599953156	0.8538639440430018	137.1455560460055	0.01675577763792697	0.029043706713949447	6.376465268359467e-08	7.195420001507018	-0.1021580137471616	
SSSGSWGNGGHPS(ph)PSRNYGDGTPYDHMTSR	ddPTM_K562_Methotrexat_30min_R1	3	SSSGSWGNGGHPSPSRNYGDGTPYDHMTSR	30	1	E9PH57;P15884-5;A0A1B0GVR6;P15884-15;H3BTP3;H3BPJ7;A0A1B0GVB8;P15884-10;P15884-4;P15884-14;P15884-13;P15884-12;P15884;P15884-3;H3BT24;G0LNT4;H3BP59;H3BTC3;A0A0D9SG61;A0A075B723;A0A0D9SGE5;A0A0D9SG55;H3BMC8;A0A0D9SEX8;H3BTZ0;H3BUQ3;A0A1B0GTP2	E9PH57	TCF4	Transcription factor 4	1	SSS(0.001)GS(0.001)WGNGGHPS(0.953)PS(0.021)RNY(0.018)GDGT(0.005)PYDHMTSR;SSS(0.001)GS(0.004)WGNGGHPS(0.785)PS(0.087)RNY(0.104)GDGT(0.015)PY(0.004)DHMTSR;S(0.002)S(0.002)S(0.038)GS(0.033)WGNGGHPS(0.84)PS(0.035)RNY(0.031)GDGT(0.012)PY(0.004)DHMT(0.001)SR	76.133	5.1104e-05	89106200.0	4338.799999999999	3267.05	4596.1	4634.3	3352.4	3256.89	3571.37	4914.5	4656.4	4889.4	True	False	4148.071547132427	3806.8744821450464	3631.4414194227656	4228.018114214924	3793.299360629554	3886.237898462347	4372.340634066111	4741.654249434881	4439.924980345483	4003.8822807453002	1.0360123640698764	0.9507958064732158	0.9069800670430284	1.0559796262111638	0.9474053168025341	0.970617422283191	1.0920252713454464	1.1842641508811416	1.1089049749781894	1.0	11.967183842382047	-8.807292078260744	4.978563196982619	1.114394544450972	0.9753859742287898	0.4864764819919014	0.058663689875319586	0.147431361432091	8.05852859090573	0.024153484369243	0.01644626814012308	1.5585040017241616e-09	8.807292078260744	-0.13900857022218216	
SSSGSWGNGGHPSPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SSSGSWGNGGHPSPSR	16	0	E9PH57;P15884-5;A0A1B0GVR6;P15884-15;H3BTP3;H3BPJ7;A0A1B0GVB8;P15884-10;P15884-4;P15884-14;P15884-13;P15884-12;P15884;P15884-3;H3BT24;G0LNT4;H3BP59;H3BTC3;A0A0D9SG61;A0A075B723;A0A0D9SGE5;A0A0D9SG55;H3BMC8;A0A0D9SEX8;H3BTZ0;H3BUQ3;A0A1B0GTP2	E9PH57	TCF4	Transcription factor 4	1	SSSGSWGNGGHPS(0.037)PS(0.963)R	79.293	0.017679	3329800.0	797.41	1011.1	1308.3	1205.3	1002.2	1004.3	839.55	1015.6	1124.7	1256.8	True	False	762.3568111917745	1178.1670892385657	1033.7057089773518	1099.6332203489733	1134.006866490555	1198.366761366129	1027.8404587959815	979.8807723524407	1072.412942486591	1029.1813413589998	0.7407409953479215	1.1447614155954626	1.0043960839907744	1.0684542909580386	1.101853308954413	1.1643883475226293	0.9986971367346713	0.9520972961466058	1.042005815098149	1.0	10.007281491606589	-6.250933010031534	24.753919773678245	1.0537452353476466	0.740740793791911	0.6768669970639214	0.06471545157387346	826.8720119159061	1948140.3942842744	0.016906914043031653	0.2353117560828259	5.611345244153097e-07	6.250933010031534	-0.3130044415557356	
SSSISEEKGDS(ph)DDEKPR	ddPTM_K562_Methotrexat_30min_R1	1	SSSISEEKGDSDDEKPR	17	2	S4R3H4;E7EQT4;Q9UKV3;Q9UKV3-5	S4R3H4	ACIN1	Apoptotic chromatin condensation inducer in the nucleus	1	SSSIS(0.001)EEKGDS(0.998)DDEKPR	105.92	0.0031291	22078000.0	2687.4	1275.1	4001.9	2384.0	1363.3	1477.1	1124.7	1684.5	1700.6	2855.0	True	False	2569.2651138019023	1485.7886020058297	3161.9558791993163	2174.9984213987823	1542.597845825758	1762.5286699331975	1376.9426049762842	1625.2551802163111	1621.5394771874262	2337.931834484361	1.0989478289766146	0.635514081330573	1.3524585415881882	0.9303087409639922	0.6598130121128973	0.7538836864000911	0.5889575498594354	0.6951679070552401	0.6935785950940963	1.0	11.19101715144996	-7.649311151356502	5.162546131435893	0.7115169357384828	1.012084553648309	0.32826827971409	0.19230783525901632	0.23317162444224473	9.618269711261652	0.05538133290020834	0.07178397267625315	2.242274864783975e-08	7.649311151356502	0.3005676179098261	
SSSLIQLTSQNS(ph)SPNQQR	ddPTM_K562_Methotrexat_30min_R1	4	SSSLIQLTSQNSSPNQQR	18	0	H7C419;O95639	H7C419	CPSF4	Cleavage and polyadenylation specificity factor subunit 4	1	SSSLIQLTSQNS(0.919)S(0.081)PNQQR;SSSLIQLTSQNS(0.774)S(0.226)PNQQR;SSSLIQLT(0.007)S(0.023)QNS(0.485)S(0.485)PNQQR;SSSLIQLT(0.044)S(0.044)QNS(0.621)S(0.292)PNQQR	292.2	2.904199999999999e-177	84195000.0	11524.9	10154.2	13587.999999999998	12474.8	10758.4	10838.0	9924.8	12168.4	12055.0	13398.3	True	False	11018.27919552562	11832.008958111206	10736.064491006837	11381.153652376473	12173.318172472558	12932.290112203638	12150.689042294505	11740.430474885221	11494.56568122687	10971.738037818497	1.0042419129536906	1.0784078983044838	0.9785199440599732	1.0373154748269382	1.1095159336207567	1.178691112349503	1.1074534408689198	1.0700611365689845	1.0476522171424654	1.0	13.421504461345918	-7.673777318284508	5.523948762923784	1.094672193931184	1.0236551442510091	0.2570309326400434	0.04968958469481612	0.2670300497553104	13.050909727653757	0.015194118075251149	0.019612848482705707	2.119447589872591e-08	7.673777318284508	-0.07101704968017497	
SSSMS(ph)SIDLVSASDDVHR	ddPTM_K562_Methotrexat_30min_R1	2	SSSMSSIDLVSASDDVHR	18	0	A0A0A0MRE4;A0A2R8YFA1;A0A2U3TZL3;Q9Y5P4;Q9Y5P4-3	A0A0A0MRE4	COL4A3BP	Collagen type IV alpha-3-binding protein	1	SS(0.001)S(0.052)MS(0.924)S(0.022)IDLVSASDDVHR;S(0.032)S(0.032)S(0.184)MS(0.634)S(0.118)IDLVSASDDVHR	158.25	1.9985e-14	50827000.0	3294.3	2820.52	3262.2	3192.2	2821.17	2461.92	2447.5	3487.3999999999996	3395.87	3697.6000000000004	True	False	3149.4865164834446	3286.5629893572936	2577.5088006007163	2912.3447822102303	3192.2033042677695	2937.6511969954217	2996.414177718019	3364.746165322863	3237.99674491148	3027.928809523422	1.040145497006964	1.0854162023295981	0.8512448484567908	0.9618273629982127	1.054253090174271	0.970185028048196	0.9895920169238183	1.111236880715321	1.0693767748856426	1.0	11.564115570780023	-9.23866994239456	23.32937246442047	1.0677301147422726	0.9915737801082846	0.17800106498115298	0.06528069643987135	520.9137599120183	533725.1925566336	0.03187943317496228	0.018383441191748277	5.772049642755229e-10	9.23866994239456	-0.07615633463398808	
SSSMS(ph)SLTGAYTSGIPSSSR	ddPTM_K562_Methotrexat_30min_R1	3	SSSMSSLTGAYTSGIPSSSR	20	0	A8CG34-2;A8CG34	A8CG34-2	POM121C	Nuclear envelope pore membrane protein POM 121C	1	S(0.002)S(0.005)S(0.25)MS(0.57)S(0.173)LTGAYTSGIPSSSR;S(0.001)S(0.01)S(0.285)MS(0.547)S(0.157)LTGAYTSGIPSSSR;SS(0.003)S(0.082)MS(0.881)S(0.033)LT(0.001)GAYTSGIPSSSR	122.1	1.835e-05	69690000.0	7674.0	7115.7	9972.2	7693.9	7275.299999999999	6638.5	6930.200000000001	6737.219999999999	7574.200000000001	8372.8	True	False	7336.66014858815	8291.448478780392	7879.171498176217	7019.387732550373	8232.129470942662	7921.29617179035	8484.473762787095	6500.268153907353	7222.07709520934	6856.40478590916	1.0700447796877426	1.2092997332684385	1.1491695347930713	1.0237709049757628	1.2006481134049731	1.155313377656711	1.2374522840634843	0.948057817016038	1.0533329522859687	1.0	12.743236569927108	-9.27001617246191	24.999938556980233	1.000521534930643	1.149049918021728	0.5280472879500452	0.06451747991916054	511.8252721649425	1491875.569755789	0.03418968496067697	0.016838201098464838	5.370117985003176e-10	9.27001617246191	0.14852838309108485	
SSSMSS(ph)LTGAYASGIPSSSR	ddPTM_K562_Methotrexat_30min_R1	2	SSSMSSLTGAYASGIPSSSR	20	0	Q96HA1-2;Q96HA1-3;Q96HA1	Q96HA1-2	POM121	Nuclear envelope pore membrane protein POM 121	1	SSS(0.011)MS(0.113)S(0.873)LT(0.003)GAYASGIPSSSR;SSS(0.009)MS(0.225)S(0.757)LT(0.009)GAYASGIPSSSR	125.18	4.2672999999999994e-08	8509100.0	2919.0	2382.67	2343.26	3739.9	2351.1499999999996	2427.5	2292.76	2713.6000000000004	3129.8	3285.9	True	False	2790.6842551119125	2776.3657190347662	1851.4417485425895	3412.0287735693373	2660.3674357905306	2896.5800191340036	2806.969793709815	2618.1611499168785	2984.2962811367765	2690.7916689779886	1.037123864803649	1.0318025550039258	0.6880658097346498	1.2680389986733116	0.9886932037369457	1.0764787376624283	1.0431761871687202	0.9730077508792434	1.1090774196838011	1.0	11.393814981189589	-7.270960443252094	24.9997277340623	1.0606988504703052	0.9302779144178758	0.23765173915488857	0.11951377135196123	1048.0961695815029	2752013.658554182	0.03282432137041574	0.049406873277344054	5.35845461583952e-08	7.270960443252094	-0.13042093605242944	
SSSMSS(ph)LTGAYTSGIPSSSR	ddPTM_K562_Methotrexat_30min_R1	1	SSSMSSLTGAYTSGIPSSSR	20	0	A8CG34-2;A8CG34	A8CG34-2	POM121C	Nuclear envelope pore membrane protein POM 121C	1	SSSMS(0.057)S(0.938)LT(0.004)GAYTSGIPSSSR	130.38	1.4616e-07	9006400.0	1485.9	1287.7	1262.0	1822.3	1307.3	1149.1	1138.8	1889.2	1608.5	2475.3	True	False	1420.5816151664235	1500.470537842449	997.123446250415	1662.541788303272	1479.2328642617276	1371.1473120440291	1394.2048889010339	1822.7557651912457	1533.7211860848965	2026.9991838525877	0.7008298900576836	0.7402422999453806	0.4919209904935661	0.8201985484490354	0.7297649037283993	0.6764419655255989	0.6878171930247933	0.8992385294042646	0.7566461784014391	1.0	10.985129792582804	-10.162192997789631	0.4605615737599063	1.0137719614240703	0.6716483324193226	0.5137741706116629	0.09052751099796859	1.0953662453598743	0.5465812107238512	0.1267408063714712	0.056666651836479676	6.883463314999137e-11	10.162192997789631	-0.3421236290047477	
SSSPAPADIAQTVQEDLR	ddPTM_K562_Methotrexat_30min_R1	2	SSSPAPADIAQTVQEDLR	18	0	Q13283	Q13283	G3BP1	Ras GTPase-activating protein-binding protein 1	0	;	180.06	4.318e-11	10356200.0	1302.13	1097.73	1417.12	1527.5900000000001	1126.35	1151.71	1100.46	1115.49	1300.1999999999998	1570.33	False	True	1244.8899243264386	1279.1112242803385	1119.6858780906402	1393.6685564364784	1274.4847675829549	1374.2616576052826	1347.266167931184	1076.2575844342496	1239.7539857927138	1285.9280201911822	0.9680867861805809	0.9946989288639732	0.8707220470428615	1.0837842667346793	0.9911011717385814	1.0686925209087268	1.047699518773129	0.8369500994886476	0.9640928312678002	1.0	10.328594174746664	-9.239174960936879	24.960071477924725	0.9253910643683546	1.0032059463710443	0.17712606204617587	0.06830183154367817	1189.09716883239	1333070.0183960323	0.032294498779056706	0.01862420455074815	5.765341526423296e-10	9.239174960936879	0.07781488200268971	
SSSPAT(ph)EQSWMENDFDELREEGFRR	ddPTM_K562_Methotrexat_30min_R1	1	SSSPATEQSWMENDFDELREEGFRR	25	2	Q9UN81	Q9UN81	L1RE1	LINE-1 retrotransposable element ORF1 protein	1	S(0.096)S(0.096)S(0.148)PAT(0.66)EQSWMENDFDELREEGFRR	85.177	0.00015022	33463000.0	464.39	219.4	513.03	515.15	367.54	347.39	398.7	415.99	458.17	487.36	True	False	443.9759716448853	255.65212083764345	405.3520139697702	469.9875993219727	415.8779522150657	414.51820096682246	488.1186241700407	401.35939591462346	436.8697767040825	399.09438138504294	1.112458587124385	0.6405806063979448	1.0156795807623509	1.1776352192453758	1.042054139604211	1.038647047668904	1.2230656379477012	1.005675385661206	1.0946527866113809	1.0	8.640586157912322	-6.9868075930528795	24.99945479180374	1.0864595411719573	0.8644221439317321	0.29742167296917055	0.12527077734310407	233.09010645139912	441696.9153115876	0.03013748783758182	0.06268359083551799	1.0308427170114207e-07	6.9868075930528795	-0.2220373972402252	
SSSPATEQS(ph)WMENDFDELREEGFR	ddPTM_K562_Methotrexat_30min_R1	1	SSSPATEQSWMENDFDELREEGFR	24	1	Q9UN81	Q9UN81	L1RE1	LINE-1 retrotransposable element ORF1 protein	1	S(0.002)S(0.002)S(0.045)PAT(0.152)EQS(0.799)WMENDFDELREEGFR	75.611	0.00085016	6010600.0	431.2	296.04	368.69	413.39	343.44	361.35	268.26	430.04	353.75	363.94	True	False	412.2449643043018	344.9555781803828	291.30700744696145	377.14874052938035	388.6083797919741	431.17577339405636	328.4241337342743	414.91524945100787	337.30423971248473	298.0269393492955	1.3832473171867854	1.157464418933235	0.9774519313018944	1.265485399920012	1.303937089178756	1.4467677799043088	1.1019947876233849	1.3922071956210513	1.1317911073708513	1.0	8.219298934921959	-10.002548182631257	24.829897025865694	0.9999999819863773	1.2457114947926813	0.2586636552382563	0.13600999282282483	101.94854759361121	993414.647663985	0.13422315918000643	0.0346562706553392	9.941497722771328e-11	10.002548182631257	0.245711512806304	
SSSPCRT(ph)PEPDNDAHLR	ddPTM_K562_Methotrexat_30min_R1	1	SSSPCRTPEPDNDAHLR	17	1	Q9Y2K6	Q9Y2K6	USP20	Ubiquitin carboxyl-terminal hydrolase 20	1	S(0.223)S(0.223)S(0.223)PCRT(0.33)PEPDNDAHLR	147.56	6.0231e-10	28941000.0	3129.2	2758.9	3900.6	3606.0	2565.5	3004.6	2839.4	2922.7	2855.3	3652.0	True	False	2991.6441147982837	3214.7613317182077	3081.9173648529077	3289.8675786761787	2902.908217902136	3585.196426566436	3476.2077287896013	2819.9069843978696	2722.5577262220736	2990.587411396457	1.0003533430916616	1.0749598287839621	1.0305391352576463	1.1000740410192433	0.9706816148693079	1.1988268301083786	1.162382920339514	0.9429274575462457	0.9103755723196779	1.0	11.546213171183977	-9.289068884419187	23.706844114357168	0.9449885448859165	1.0764820968200406	0.4171017514407267	0.0679961308351823	392.4560891424553	336734.1652719918	0.03820947642581458	0.018364734525370824	5.13962124434829e-10	9.289068884419187	0.13149355193412404	
SSSPNS(ph)PLPMFR	ddPTM_K562_Methotrexat_30min_R1	1	SSSPNSPLPMFR	12	0	A0A0U1RR27;Q7Z401;Q7Z401-2;H3BTW5	A0A0U1RR27	DENND4A	C-myc promoter-binding protein	1	SSS(0.002)PNS(0.998)PLPMFR	109.15	0.0020307000000000003	32210000.0	4751.1	4793.3	5999.0	4972.9	4020.6	4109.9	4210.1	4977.7	4771.8	5155.0	True	False	4542.247332806509	5585.311352830791	4739.891881185608	4536.933577925338	4549.379372791786	4904.080008502093	5154.322095857257	4802.631469612781	4549.960059533671	4221.3795470286805	1.076010172078386	1.3231009651245758	1.1228300673702498	1.07475139995852	1.0776996766362732	1.1617244916899139	1.2210041855831824	1.1376924098173615	1.0778372351607828	1.0	12.043498833455226	-9.976523577544427	2.521099620293401	1.001167574715588	1.1526513143549713	0.300864045589306	0.07238103501488863	0.34170331385786956	4.991169254641626	0.0715867302318983	0.019523884906564495	1.0555441969023591e-10	9.976523577544427	0.15148373963938333	
SSSQPS(ph)SCCSDPSKPGGNVEGATQSLAEQMR	ddPTM_K562_Methotrexat_30min_R1	1	SSSQPSSCCSDPSKPGGNVEGATQSLAEQMR	31	1	Q13501;E7EMC7;Q13501-2	Q13501	SQSTM1	Sequestosome-1	1	S(0.021)S(0.021)S(0.119)QPS(0.381)S(0.186)CCS(0.109)DPS(0.141)KPGGNVEGAT(0.014)QS(0.007)LAEQMR	46.102	0.020446000000000002	12102000.0	1473.9	1083.8	1758.7	1228.2	1010.1	941.04	808.3	1411.4	1294.5	1820.6	True	False	1409.1091207980285	1262.8795285498534	1389.5729040575304	1120.5256129035172	1142.9458549611954	1122.8826616707984	989.581850806732	1361.760262010864	1234.3189775485844	1490.871698025299	0.9451578715086164	0.8470745874528118	0.9320539828464504	0.7515909077807865	0.7666292521851873	0.7531718947767857	0.6637605718301988	0.9133986940757901	0.8279176398502125	1.0	10.541940391654913	-7.256285811870436	24.68704553143439	0.796931970250493	0.9019933943953035	0.17896606911000723	0.0917429879107232	569.285312487662	2727026.1372180018	0.024745540985565487	0.0412411992625649	5.5426083044289135e-08	7.256285811870436	0.10506142414481046	
SSSQRS(ph)PS(ph)PGPNHTSNSSNASNATVVPQNSSAR	ddPTM_K562_Methotrexat_30min_R1	1	SSSQRSPSPGPNHTSNSSNASNATVVPQNSSAR	33	1	A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9	A0A0A0MRT2	WAC	WW domain-containing adapter protein with coiled-coil	2	S(0.054)S(0.054)S(0.183)QRS(0.617)PS(0.523)PGPNHT(0.536)S(0.031)NS(0.001)SNASNATVVPQNSSAR	90.015	1.0727e-06	47192000.0	1294.9	940.21	1045.0	1008.5	1002.8	986.52	1002.5	1076.2	1105.6	1451.2	True	False	1237.9777464694805	1095.5637216625369	825.6687807699551	920.086370797262	1134.6857770073132	1177.1510280025025	1227.336144295124	1038.3494360040331	1054.2008973176635	1188.3736175844854	1.0417411899347122	0.9219017533302397	0.6947888850378787	0.7742399841116046	0.9548224230303098	0.9905563457351113	1.0327864285558903	0.8737567214884872	0.887095507438524	1.0	10.214772766840916	-7.798292548653092	22.52509974594341	0.9557078927277749	0.8510505203272279	0.19958673965066864	0.09604276894318625	102.50817502475961	62652.969144307055	0.032591140842242995	0.036957194031129896	1.591136547486401e-08	7.798292548653092	-0.10465737240054696	
SSSQRS(ph)PSPGPNHT(ph)SNSSNASNATVVPQNSSAR	ddPTM_K562_Methotrexat_30min_R1	1	SSSQRSPSPGPNHTSNSSNASNATVVPQNSSAR	33	1	A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9	A0A0A0MRT2	WAC	WW domain-containing adapter protein with coiled-coil	2	S(0.023)S(0.024)S(0.208)QRS(0.566)PS(0.282)PGPNHT(0.705)S(0.124)NS(0.028)S(0.017)NAS(0.016)NAT(0.007)VVPQNSSAR	59.218999999999994	0.0020334	3578900.0	270.09	285.38	443.85	244.47	240.85	391.41	205.93	328.7	466.95	361.29	True	False	258.21716699663443	332.53419436940135	350.6919505691337	223.03769466416108	272.52599660172655	467.04444296158186	252.11504458323677	317.1394346910663	445.24159642047994	295.8568800283204	0.8727772934397099	1.1239697868022203	1.1853432326318196	0.7538702315890412	0.9211413186525845	1.5786161299236132	0.8521520424304598	1.0719353041940707	1.504922232593881	1.0	8.208755634524062														
SSSQRS(ph)PSPGPNHTSNSSNASNATVVPQNSSAR	ddPTM_K562_Methotrexat_30min_R1	1	SSSQRSPSPGPNHTSNSSNASNATVVPQNSSAR	33	1	A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9	A0A0A0MRT2	WAC	WW domain-containing adapter protein with coiled-coil	1	S(0.227)S(0.227)S(0.227)QRS(0.25)PS(0.048)PGPNHT(0.014)S(0.004)NS(0.001)SNASNATVVPQNSSAR	59.838	0.00089956	20111000.0	1441.1	1328.6	1513.6	1694.4	1316.3	1223.6	1025.8	1567.0	1241.7	1306.6	True	False	1377.7509695244175	1548.1285676613168	1195.9160445678506	1545.8545827257124	1489.4165220130888	1460.043382662148	1255.8617624119079	1511.8877218159448	1183.9736380240076	1069.9620787871336	1.2876633638139598	1.4469004073641691	1.1177181586879166	1.4447751124769128	1.392027391944051	1.364574886912997	1.173744179639995	1.4130292575693528	1.1065566355081602	1.0	10.063343950713538	-9.92186430281155	4.619591654461605	1.0022427377444656	1.328031529180609	0.5345450433995954	0.10531590130749677	0.1372933464332806	5.019580737588781	0.09721699950729741	0.025449487509116978	1.1971145164837039e-10	9.92186430281155	0.3257887914361435	
SSSQRSPSPGPNHTSNS(ph)S(ph)NASNATVVPQNSSAR	ddPTM_K562_Methotrexat_30min_R1	1	SSSQRSPSPGPNHTSNSSNASNATVVPQNSSAR	33	1	A0A0A0MRT2;Q9BTA9-5;Q9BTA9-2;Q9BTA9	A0A0A0MRT2	WAC	WW domain-containing adapter protein with coiled-coil	2	S(0.22)S(0.22)S(0.211)QRS(0.211)PS(0.352)PGPNHT(0.158)S(0.158)NS(0.231)S(0.231)NAS(0.007)NAT(0.001)VVPQNSSAR	50.583	0.0060165	4147200.0	570.66	455.17	638.58	623.64	293.7	452.87	411.4	454.34	464.27	532.87	True	False	545.5744696889905	530.379105932863	504.5507847120365	568.9664494635638	332.3266979527801	540.3807181319116	503.6669224568718	438.36060467763645	442.68618903552056	436.3620793841266	1.2502792874646766	1.2154564546062991	1.1562663406136255	1.3038860990546945	0.7615847335355534	1.2383768976777152	1.154240815718309	1.0045799701393177	1.0144928029958966	1.0	8.769381924200902	-3.0000000000013265	0.21548982923037482	0.9937660657008498	2.44326365513913	0.24519206555244466	0.13534776929394082	75.8995088579134	0.9583922475540656	0.21909200321316985	38.02499801906554	0.0009999999999969456	3.0000000000013265	1.4494975894382802	
SSSQSGSGPS(ph)SPDSVLRPR	ddPTM_K562_Methotrexat_30min_R1	1	SSSQSGSGPSSPDSVLRPR	19	1	O75427;H7C5D9	O75427	LRCH4	Leucine-rich repeat and calponin homology domain-containing protein 4	1	S(0.002)S(0.002)S(0.021)QS(0.018)GS(0.027)GPS(0.548)S(0.38)PDS(0.001)VLRPR	60.347	0.029136000000000002	27582000.0	1068.7	804.54	1100.7	1281.9	862.83	920.29	727.73	1130.3	1069.0	1286.5	True	False	1021.721227625248	937.4765601582385	869.6781119554929	1169.5178172781448	976.3072686230746	1098.1230178409187	890.9419773445286	1090.5467083398607	1019.3024233290349	1053.502383560116	0.9698328580639093	0.8898665772261571	0.8255112902702478	1.110123560732702	0.9267252583936499	1.042354564144426	0.8456952649065258	1.035163019427218	0.9675368933523353	1.0	10.040977862933556	-7.235933870278507	24.99561587802943	0.9846972692868983	0.8945498916933073	0.25194600595911554	0.07434357924265662	1111.3495380125964	1089131.491078657	0.01935267806168722	0.033505210673360104	5.80852856852098e-08	7.235933870278507	-0.09014737759359093	
SSSS(ph)FTPFIDPR	ddPTM_K562_Methotrexat_30min_R1	2	SSSSFTPFIDPR	12	0	C9J840;A0A0D9SG62;G5E948;A0A0D9SEY1;O95819-2;O95819-3;E7EX83;H7C0P6;E7ENQ1;G3XAA2;H7C360;O95819-4;O95819;O95819-5;O95819-6;E7EN19	C9J840	MAP4K4	Mitogen-activated protein kinase kinase kinase kinase 4	1	SSS(0.075)S(0.925)FTPFIDPR;SSS(0.011)S(0.983)FT(0.005)PFIDPR	244.0	1.7968e-58	52406000.0	1988.79	1525.25	2160.42	2024.81	1776.0099999999998	1584.75	1602.35	1776.79	1703.05	2240.52	True	False	1901.365172909906	1777.271637682842	1706.9773658861507	1847.2980510203297	2009.5864447773802	1890.9805088867604	1961.7177763703642	1714.29928860584	1623.875577222184	1834.740116917302	1.036313075284224	0.9686775916084412	0.9303646604480333	1.00684453018018	1.095297598961237	1.0306530562289948	1.0692074361280157	0.9343553742565871	0.8850711674362858	1.0	10.841360010625875	-9.29303149966012	20.803231544995548	0.9322845894345165	1.0170734729139022	0.3345941125510017	0.051162012892327115	108.34492627778211	71341.59207282179	0.030128680494590655	0.014480312254171906	5.092939302988437e-10	9.29303149966012	0.08478888347938562	
SSSS(ph)SQESLNRPLSAK	ddPTM_K562_Methotrexat_30min_R1	2	SSSSSQESLNRPLSAK	16	1	H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-4;Q7Z460-5;Q7Z460-3;Q7Z460	H0Y5T1;Q7Z460	CLASP1	CLIP-associating protein 1	1	S(0.001)S(0.001)S(0.001)S(0.583)S(0.415)QESLNRPLSAK;SSS(0.039)S(0.48)S(0.48)QES(0.001)LNRPLSAK	250.52	1.7753999999999998e-78	41989500.0	5829.299999999999	4434.200000000001	7977.200000000001	6376.4	4418.3	4058.5	3687.9	5434.2	5232.5	6843.4	True	False	5573.050951806736	5166.87618148714	6302.894734888122	5817.390911999658	4999.383893649191	4842.747685954832	4515.005452913703	5243.07610586612	4989.242217089973	5603.993946098172	0.9944784033335758	0.9219988870767107	1.124714765132208	1.0380794426178968	0.892110866238543	0.8641600495172975	0.8056763615987332	0.9355963186785125	0.890301143270109	1.0	12.452239681912106	-7.767225129171121	24.599657547981423	0.8884483193042165	1.0203234466523934	0.4454753071514743	0.0660856916050109	102.16201373113238	434368.41642815573	0.020708691357580418	0.02412234550182835	1.709129108650997e-08	7.767225129171121	0.13187512734817686	
SSSSASQSNHSCTS(ph)MPSSPATPASGTK	ddPTM_K562_Methotrexat_30min_R1	1	SSSSASQSNHSCTSMPSSPATPASGTK	27	0	Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;H3BQK9;H3BPE1;A0A590UJG2;H0Y390;Q9UPN3-5;H0Y6T5;H0Y4F5;H0Y314	Q9UPN3	MACF1	Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5	1	S(0.001)S(0.001)S(0.004)S(0.019)AS(0.017)QS(0.017)NHS(0.278)CT(0.278)S(0.352)MPS(0.026)S(0.007)PATPASGTK	67.31	0.0062763	25151000.0	1131.8	900.4	1171.4	1038.3	729.52	721.99	860.68	1033.2	949.62	1170.3	True	False	1082.0474271790551	1049.175795816838	925.5391481281579	947.2738510647466	825.4646669748455	861.504349336584	1053.7093991739916	996.8617703766653	905.4723734721408	958.3473295611371	1.1290764776008348	1.0947761458231375	0.9657658758771693	0.988445234671378	0.8613418554135863	0.8989479312590133	1.0995067932797646	1.0401883947787127	0.9448269385659898	1.0	9.90440481005811	-6.6977309624557195	4.3437436119236335	0.9742159272279312	1.120429184621414	0.4285751378945565	0.06364828817925892	0.2103774204551757	7.717170315874454	0.018243747749829082	0.05125188209305187	2.0057141460779984e-07	6.6977309624557195	0.1462132573934829	
SSSSASQSNHSCTSMPS(ph)SPATPASGTK	ddPTM_K562_Methotrexat_30min_R1	1	SSSSASQSNHSCTSMPSSPATPASGTK	27	0	Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;H3BQK9;H3BPE1;A0A590UJG2;H0Y390;Q9UPN3-5;H0Y6T5;H0Y4F5;H0Y314	Q9UPN3	MACF1	Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5	1	SSSSASQSNHSCTSMPS(0.945)S(0.054)PATPASGTK	144.83	1.4637e-26	5098500.0	1905.6	1668.5	3366.6	2183.9	1725.3	1367.5	1360.4	2064.9	2013.3	2759.8	True	False	1821.8321057010135	1944.19126534917	2659.996667311131	1992.4408777234896	1952.2071909360948	1631.7500210775486	1665.5043298744006	1992.2762966035395	1919.7021224399875	2259.9734769912216	0.806129861367435	0.8602717178511037	1.177003488931416	0.8816213544134567	0.863818629205832	0.7220217571977668	0.7369574673468037	0.8815485300543986	0.8494356867390105	1.0	11.142090125958404	-7.516676856741096	22.975911081406473	0.8294232858013706	0.954092610905784	0.1365199723598789	0.1157007359749529	165.37833396184723	612673.7676142975	0.03474534395140631	0.04660288421060763	3.0431484833145794e-08	7.516676856741096	0.12466932510441342	
SSSSASQSNHSCTSMPSS(ph)PATPASGTK	ddPTM_K562_Methotrexat_30min_R1	1	SSSSASQSNHSCTSMPSSPATPASGTK	27	0	Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;H3BQK9;H3BPE1;A0A590UJG2;H0Y390;Q9UPN3-5;H0Y6T5;H0Y4F5;H0Y314	Q9UPN3	MACF1	Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5	1	SSSSASQSNHSCTSMPS(0.07)S(0.858)PAT(0.07)PAS(0.001)GTK	122.7	1.8801e-13	5420200.0	1253.7	937.28	2056.1	1504.2	1001.4	1151.8	792.21	1403.1	1254.0	1663.7	True	False	1198.5888491379942	1092.1495889640214	1624.5527082689994	1372.3291214211613	1133.1016524682125	1374.3690488315328	969.8832587252274	1353.7521777153486	1195.70181370871	1362.387808417384	0.879770680369148	0.8016436892757545	1.1924304505896592	1.0072969773674985	0.8317027247803095	1.0087942950899325	0.7118995433847071	0.9936614004847365	0.8776515807915923	1.0	10.411921714622009	-7.744170466059987	24.977642108504117	0.8992741768347672	0.9741071090127728	0.06137527298564971	0.1259371459978993	719.898631029614	1041252.3469865257	0.03766546689509524	0.048503235746682784	1.802310172536605e-08	7.744170466059987	0.07483293217800557	
SSSSEGGVSAS(ph)PVPSVVSSSTAPSALHTLQSR	ddPTM_K562_Methotrexat_30min_R1	1	SSSSEGGVSASPVPSVVSSSTAPSALHTLQSR	32	0	A0A590UJ53;Q9P2N6-6;Q9P2N6-2;Q9P2N6-5;Q9P2N6-4;Q9P2N6-3;Q9P2N6	A0A590UJ53	KANSL3	KAT8 regulatory NSL complex subunit 3	1	SSSSEGGVS(0.009)AS(0.989)PVPS(0.002)VVSSSTAPSALHTLQSR	90.211	4.7397e-07	10793000.0	967.25	820.24	1009.5	594.56	776.51	628.78	595.15	772.55	773.71	1079.3	True	False	924.7308481524482	955.7707183038684	797.6197456337507	542.4358479139511	878.634675612234	750.2828360169223	728.6275374336585	745.3789786144914	737.7403909765281	883.828311369167	1.0462788261669485	1.0813986223447098	0.9024600540325894	0.6137344107857851	0.9941237051471147	0.8489011116363029	0.8243994088681297	0.8433526840295495	0.8347100692369435	1.0	9.787622334965263	-6.854142503636081	4.783002586355141	0.8435725437414444	1.0632488765428025	0.4040997806430947	0.10091642276616668	0.17726361808716296	6.845957677250831	0.02570245620694934	0.05722426463913954	1.3991281558722863e-07	6.854142503636081	0.21967633280135812	
SSSSLLASPGHISVKEPTPSIAS(ph)DISLPIATQELR	ddPTM_K562_Methotrexat_30min_R1	2	SSSSLLASPGHISVKEPTPSIASDISLPIATQELR	35	1	A0A499FIX8;H7BXI1;A0A087WXU3;A0FGR8-5;A0FGR8-2;A0FGR8;A0FGR8-6	A0A499FIX8	ESYT2	Extended synaptotagmin-2	1	SSSSLLASPGHISVKEPT(0.003)PS(0.074)IAS(0.861)DIS(0.061)LPIAT(0.001)QELR;SSSSLLASPGHISVKEPT(0.007)PS(0.059)IAS(0.809)DIS(0.125)LPIAT(0.001)QELR	97.48200000000001	7.220100000000001e-13	57766000.0	2822.5	1994.8899999999999	3123.3	3652.1	1998.79	1710.92	2077.98	2830.6000000000004	3392.3	4135.4	True	False	2698.4262795660734	2324.511665167759	2467.762012419904	3331.9260632510427	2261.6659196494275	2041.5310757308953	2544.0199113440217	2731.0461936006463	3234.592713432261	3386.4389871546855	0.7968329829067181	0.6864177013036438	0.7287188760171162	0.9839025820012056	0.6678596390569251	0.6028548228610511	0.751237486041799	0.8064654948634684	0.9551604873737864	1.0	11.725553287883853	-9.726413056590669	2.423448295792028	0.9997655937108412	0.7439213106169381	0.4861550398551212	0.09471694176921955	0.25840850409912564	2.8288806439268175	0.09236055601428962	0.026796465968529547	1.8775302521683734e-10	9.726413056590669	-0.25584428309390306	
SSSSPLVVVSVKS(ph)PNQSLR	ddPTM_K562_Methotrexat_30min_R1	1	SSSSPLVVVSVKSPNQSLR	19	1	Q96B01-3;Q96B01-2;Q96B01	Q96B01-3	RAD51AP1	RAD51-associated protein 1	1	SSSSPLVVVS(0.04)VKS(0.938)PNQS(0.022)LR	82.146	0.0039777	10665000.0	1041.8	731.62	1302.2	1270.2	787.0	668.4	790.73	803.77	1143.9	1061.8	True	False	996.0037194160981	852.5077695863112	1028.8860156159194	1158.843538112723	890.5042944802109	797.5588402839003	968.0713310508564	775.5009535188269	1090.720338677347	869.4977309476334	1.1454931783784996	0.9804600279487727	1.1833107540080348	1.3327735045952822	1.0241594230610391	0.917263854633261	1.1133684385763623	0.8918953160161064	1.2544257447211635	1.0	9.764038452436123	-7.902601997587681	19.950895596533705	1.0261582300649335	1.1529404268327177	0.19917291406481397	0.12383837788097336	5.754992710897114	1166.8941188756123	0.03823119678797366	0.043350262041290805	1.2514053358056276e-08	7.902601997587681	0.12678219676778424	
SSSSS(ph)QESLNRPFSSK	ddPTM_K562_Methotrexat_30min_R1	3	SSSSSQESLNRPFSSK	16	1	E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2	E3W994	CLASP2	CLIP-associating protein 2	1	S(0.002)S(0.005)S(0.007)S(0.021)S(0.868)QES(0.097)LNRPFSSK;SSSSS(1)QESLNRPFSSK;SSSS(0.006)S(0.994)QESLNRPFSSK	272.95	2.581599999999999e-128	212090000.0	17431.800000000003	12860.9	24390.0	20002.0	13550.300000000001	12490.0	12802.8	14831.099999999999	15320.3	19674.8	True	False	16665.51894424798	14985.945127077703	19270.872309071012	18248.455715108415	15332.401958697832	14903.515731816138	15674.153803672427	14309.481806652495	14608.062596939037	16111.503067289972	1.0343863558008306	0.930139482609949	1.1960940098875865	1.1326352134182283	0.9516431765963603	0.925023299785957	0.9728548440334246	0.8881531255580994	0.906685275478533	1.0	13.975803471146529	-7.857968417084699	6.789512286338844	0.9345039865665221	1.071440186122495	0.45982209936079244	0.07035482115678297	0.21037560594236687	12.637815007108175	0.023295012634162487	0.02653449651724317	1.3868566806816386e-08	7.857968417084699	0.1369361995559728	
SSSSS(ph)QESLNRPLSAK	ddPTM_K562_Methotrexat_30min_R1	1	SSSSSQESLNRPLSAK	16	1	H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-4;Q7Z460-5;Q7Z460-3;Q7Z460	H0Y5T1;Q7Z460	CLASP1	CLIP-associating protein 1	1	S(0.023)S(0.023)S(0.103)S(0.162)S(0.621)QES(0.068)LNRPLSAK	83.39299999999999	0.013016	86512000.0	2943.9	1718.7	4418.0	3195.6	2352.1	1959.4	1787.5	3225.4	3223.1	3836.9	True	False	2814.4896809263305	2002.685962095068	3490.722175542261	2915.446709489072	2661.442377442062	2338.0263190488845	2188.392376985071	3111.9608538258785	3073.2587845012285	3142.000229678825	0.8957636776538452	0.6373920482812258	1.110987243912163	0.9278951293352035	0.8470535273366656	0.7441203526862497	0.6964965681141178	0.9904394100391212	0.9781217567941989	1.0	11.617467570754568	-9.327772069503784	24.92187853131258	0.9882109272297118	0.8402527337627705	0.23863861320755564	0.1246641716039748	309.8676179866845	116418.26016256669	0.07116830913429464	0.03418813239455831	4.701407875573471e-10	9.327772069503784	-0.14795819346694128	
SSSSSASPS(ph)SPSSREEK	ddPTM_K562_Methotrexat_30min_R1	3	SSSSSASPSSPSSREEK	17	1	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;Q9NYF8-4;H0YF63	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	SSSSSAS(0.005)PS(0.55)S(0.408)PS(0.028)S(0.009)REEK;SSSSSAS(0.021)PS(0.773)S(0.184)PS(0.014)S(0.008)REEK;SSSSS(0.001)AS(0.004)PS(0.904)S(0.083)PS(0.004)S(0.005)REEK	157.84	2.4097e-10	4322300.0	3866.1299999999997	2826.81	5268.93	4317.48	2674.3	2538.3500000000004	2583.42	3190.88	3099.5699999999997	4219.87	True	False	3696.179554373352	3293.8923049455752	4163.053597188747	3938.973231720141	3026.0173249408235	3028.8502127986803	3162.8176976507825	3078.654941792001	2955.471667238522	3455.610651623648	1.0696169004562683	0.9532012246223144	1.2047229901993444	1.1398776160935205	0.8756823699218034	0.8765021636264344	0.9152702710198863	0.890914877908907	0.8552675533193731	1.0	11.754724960897576	-7.766744149414366	24.999956929075797	0.8961799277666936	1.090012895177019	0.6397974808299023	0.06959188839199484	84.1376031357389	396517.6448291181	0.022024418750288655	0.025707434348187678	1.7110230122527934e-08	7.766744149414366	0.1938329674103253	
SSSSSASPSS(ph)PSSREEK	ddPTM_K562_Methotrexat_30min_R1	1	SSSSSASPSSPSSREEK	17	1	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;Q9NYF8-4;H0YF63	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	SSSSSAS(0.014)PS(0.185)S(0.595)PS(0.084)S(0.122)REEK	88.319	0.018471	1094500.0	637.1	552.85	1165.2	720.63	526.86	559.3	424.13	385.09	834.83	965.44	True	False	609.0938468420004	644.1990656567508	920.640443400145	657.4534867502533	596.1513247647315	667.3768093518631	519.2519490073723	371.54616642891017	796.0189355170988	790.5894606951247	0.7704300109268538	0.814833864709428	1.1644987558911717	0.8315991034995436	0.7540592866499464	0.8441509057875285	0.6567908817691812	0.46996094041302894	1.0068676286390161	1.0	9.626784912571733	-7.518313583170013	23.783985925272553	0.7614567656164997	0.9216849355407627	0.08268455906863259	0.17697483669066005	205.26647205323457	1069420.4380628644	0.05180930534869129	0.0687973800492144	3.0317013478840775e-08	7.518313583170013	0.16022816992426303	
SSSSSGVPYS(ph)PAIPNK	ddPTM_K562_Methotrexat_30min_R1	1	SSSSSGVPYSPAIPNK	16	0	A0A0A0MRE1;B4DJ07;A0A0A0MSB8;Q9UPT5-4;Q9UPT5-2;Q9UPT5-5;Q9UPT5-1;Q9UPT5-6;Q9UPT5	A0A0A0MRE1	EXOC7	Exocyst complex component 7	1	SSSSS(0.001)GVPY(0.073)S(0.925)PAIPNK	91.845	0.0077063999999999995	12865000.0	5670.3	3965.1	6248.8	5690.1	3637.9	3495.9	3494.4	5031.8	5003.9	6260.5	True	False	5421.04040142551	4620.2653798237925	4937.26227490459	5191.257767450169	4116.3476148533155	4171.43319830713	4278.108152244271	4854.8287419486105	4771.269781193791	5126.662784514652	1.0574209050378816	0.9012227981484449	0.9630557893953634	1.0125998111540766	0.8029292715110802	0.8136741918948048	0.8344820660267565	0.9469764144840713	0.9306775151284877	1.0	12.323804289651392	-3.000001690271451	0.7146849085438536	0.8943009678271653	21.720927046386226	0.2530213162036845	0.07170602469313304	453.24564934645787	2.2620401020395766	0.029461710215944095	15120.093184457335	0.0009999961080137281	3.000001690271451	20.826626078559062	
SSSSSGVPYS(ph)PAIPNKR	ddPTM_K562_Methotrexat_30min_R1	1	SSSSSGVPYSPAIPNKR	17	1	A0A0A0MRE1;B4DJ07;A0A0A0MSB8;Q9UPT5-4;Q9UPT5-2;Q9UPT5-5;Q9UPT5-1;Q9UPT5-6;Q9UPT5	A0A0A0MRE1	EXOC7	Exocyst complex component 7	1	SSSSSGVPY(0.002)S(0.997)PAIPNKR	69.081	0.025028	17327000.0	2273.4	1658.4	3061.3	2758.1	1914.6	1460.4	1546.6	2592.1	2497.2	2952.5	True	False	2173.464058092298	1932.4224120198178	2418.7749651397753	2516.301655226502	2166.403458973077	1742.6016312845709	1893.4644197175453	2500.9343737837344	2381.1057170601202	2417.7736396900423	0.8989526655485147	0.799256961155203	1.000414151859916	1.0407515467614623	0.8960323759881876	0.7207463935738715	0.7831437933785591	1.0343955830804548	0.9848340133964638	1.0	11.239463465484274	-9.282782888680014	24.897222563390386	1.0072111154924608	0.8798113448440382	0.295883900710322	0.091380151193393	1192.518513247579	1391065.390988987	0.05640879028200107	0.027141805836684484	5.21455330490696e-10	9.282782888680014	-0.12739977064842256	
SSSSSSQPEHSAMLVST(ph)AASPSLIK	ddPTM_K562_Methotrexat_30min_R1	1	SSSSSSQPEHSAMLVSTAASPSLIK	25	0	P42166	P42166	TMPO	Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin	1	SSSSSS(0.001)QPEHS(0.018)AMLVS(0.148)T(0.48)AAS(0.276)PS(0.077)LIK	83.944	0.002886	13548000.0	2286.9	1193.9	2538.3	1893.8	1441.8	1293.3	1223.2	1761.6	1582.4	2284.6	True	False	2186.370614256742	1391.1716821698378	2005.5455179218923	1727.7734943141834	1631.4219717681917	1543.2119212135965	1497.5337373584002	1699.6435295156139	1508.8345693880876	1870.8368017733708	1.1686591861910542	0.7436093200920266	1.072004525472682	0.9235297769834454	0.87202794504671	0.8248778940796878	0.8004619836101601	0.9084937434973043	0.8065025062356372	1.0	10.869467998483323	-7.640482790247766	3.5827684079911513	0.8581733048607715	0.973224965777393	0.18405984393112962	0.11442939354311685	0.4027142327739966	9.953393714345232	0.03285127249334984	0.04334581848961007	2.2883223889441983e-08	7.640482790247766	0.11505166091662156	
SSSSVS(ph)S(ph)QGSVASSTGS(ph)PAS(ph)IR	ddPTM_K562_Methotrexat_30min_R1	1	SSSSVSSQGSVASSTGSPASIR	22	0	A0A087WXK8;Q9H4H8-2;Q9H4H8	A0A087WXK8	FAM83D	Protein FAM83D	4	S(0.031)S(0.031)S(0.031)S(0.031)VS(0.746)S(0.746)QGS(0.012)VAS(0.028)S(0.028)T(0.324)GS(0.998)PAS(0.996)IR	73.219	0.0060715000000000005	55174000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
SSSTSSSTVTSSAGSEQQNQSSS(ph)GSESTDKGSSR	ddPTM_K562_Methotrexat_30min_R1	1	SSSTSSSTVTSSAGSEQQNQSSSGSESTDKGSSR	34	1	Q8N488	Q8N488	RYBP	RING1 and YY1-binding protein	1	SSSTSSSTVTSSAGSEQQNQS(0.055)S(0.127)S(0.789)GS(0.022)ES(0.004)T(0.003)DKGSSR	123.5	1.0796999999999998e-26	0.0	148.9	0.0	294.74	234.02	163.42	189.08	64.755	0.0	200.76	193.55	True	False	142.35453428782586	0.0	232.87810186041776	213.5038299394895	184.91259441417537	225.61703399293805	79.27795713100319	0.0	191.42671141958576	158.49621946215342	0.8981572858387202	0.0	1.4692975179513708	1.3470594482568783	1.1666688015756097	1.4234852715008266	0.5001883161631726	0.0	1.2077683118826419	1.0	7.308304618604704														
SSSVGSSSSYPIS(ph)PAVSR	ddPTM_K562_Methotrexat_30min_R1	4	SSSVGSSSSYPISPAVSR	18	0	Q15149-4;H0YDN1;Q15149-7;Q15149-8;Q15149-9;Q15149-5;Q15149-6;Q15149-3;Q15149-2;Q15149	Q15149-4	PLEC	Plectin	1	SSSVGSSSSY(0.001)PIS(0.996)PAVS(0.003)R;SSSVGSSSSYPIS(0.946)PAVS(0.054)R;SSSVGSSS(0.003)S(0.003)YPIS(0.994)PAVSR;SSSVGSSSSYPIS(1)PAVSR	300.18	3.939099999999998e-201	174595000.0	5899.139999999999	5144.38	8014.4	6979.5	5649.95	5567.990000000001	5157.610000000001	6579.37	6166.79	7216.4	True	False	5639.820869030789	5994.40135549114	6332.286963256199	6367.618071372822	6393.017456923086	6643.9252649795835	6314.335332845855	6347.969827877582	5880.097278916057	5909.440031654271	0.9543748373485051	1.0143772207487967	1.071554483899815	1.0775332412655503	1.0818313448784493	1.1242901576783924	1.0685166951560112	1.0742083503469535	0.9950345967501087	1.0	12.528805714247618	-6.465691715281396	2.356073351925418	1.0682379356299576	0.9486701937259064	0.44489979233667476	0.0368567894185548	0.3274599080888694	2.923978129528653	0.009799602289584292	0.06654957227269628	3.422222834159981e-07	6.465691715281396	-0.11956774190405117	
SST(ph)LT(ph)S(ph)SRLATGEEEGGGS(ph)SSKR	ddPTM_K562_Methotrexat_30min_R1	1	SSTLTSSRLATGEEEGGGSSSKR	23	2	P00519-2;P00519	P00519-2	ABL1	Tyrosine-protein kinase ABL1	4	S(0.438)S(0.439)T(0.677)LT(0.619)S(0.785)S(0.04)RLAT(0.084)GEEEGGGS(0.501)S(0.368)S(0.047)KR	50.956	0.029764999999999996	7229300.0	492.26	604.59	560.68	572.91	470.49	471.26	542.76	462.4	689.71	469.63	True	False	470.6208398154813	704.4882212271232	443.0009301455489	522.6838698001579	532.3676817153676	562.3243253623439	664.4877463118419	446.13712990918503	657.645532641973	384.57545619225573	1.2237412248695612	1.8318595476746642	1.151922003894303	1.359119156940841	1.3842996820089009	1.4621950421121739	1.7278475150001598	1.160076969878581	1.7100559124428496	1.0	8.587122881834722	-12.134845433051364	4.627248209377982	0.9999600458081356	1.4444315022642804	0.2531673308567194	0.22963330217062464	173878533.1498876	7.148248443241372	81714.96750162446	0.051785404509767465	7.330853944110667e-13	12.134845433051364	0.44447145645614483	
SST(ph)PLPTISSSAENTR	ddPTM_K562_Methotrexat_30min_R1	7	SSTPLPTISSSAENTR	16	0	G5E972;P42167;H0YJH7;P42167-2;P42167-3;P42166	G5E972;P42166	TMPO	Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin	1	S(0.015)S(0.089)T(0.897)PLPTISSSAENTR;S(0.004)S(0.004)T(0.992)PLPTISSSAENTR;S(0.009)S(0.009)T(0.981)PLPTISSSAENTR;S(0.006)S(0.006)T(0.989)PLPTISSSAENTR;S(0.004)S(0.006)T(0.989)PLPTISSSAENTR;S(0.018)S(0.018)T(0.964)PLPTISSSAENTR;S(0.007)S(0.011)T(0.982)PLPTISSSAENTR	204.23	9.963799999999997e-101	4540622000.0	14266.539999999999	12799.71	18140.300000000003	16348.1	13561.9	11353.48	11879.83	14491.259999999998	13733.960000000001	16232.4	True	False	13639.399983872663	14914.644519629874	14332.898931867205	14914.887455062684	15345.52756202182	13547.37932673018	14544.184286365617	13981.594172075636	13095.47119729096	13292.555064827997	1.0260931715048835	1.1220299217788394	1.0782651538372747	1.122048197831233	1.1544452881467442	1.0191704499743957	1.094160168262114	1.0518364681498167	0.9851733645957564	1.0	13.698330822392226	-9.569569199773692	2.429182773946839	0.9906320258843797	1.0906160975956876	0.47237364038134444	0.03973051693965611	0.2588662670894267	2.84773559161109	0.033620441227182184	0.01078963595808757	2.6942060077608817e-10	9.569569199773692	0.09998407171130785	
SST(ph)PPGESYFGVSSLQLK	ddPTM_K562_Methotrexat_30min_R1	2	SSTPPGESYFGVSSLQLK	18	0	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	S(0.016)S(0.016)T(0.969)PPGESYFGVSSLQLK;S(0.024)S(0.037)T(0.939)PPGESYFGVSSLQLK	174.46	2.8116e-13	426660000.0	9487.400000000001	6093.9	11044.6	9797.2	6148.2	5450.299999999999	6062.200000000001	8923.9	9373.5	13572.5	True	False	9070.345255892002	7100.813396410736	8726.489393389327	8938.294687134292	6956.7960652137635	6503.4933381199	7421.802667277702	8610.04137888533	8937.728030939861	11114.38872978599	0.8160903380663611	0.6388847438258949	0.7851524366790218	0.804209291616742	0.6259270063651732	0.5851417919809546	0.6677652588655328	0.7746752060066842	0.8041583075987985	1.0	13.440140984616402	-10.099588893876911	1.5203449421596118	0.9979460300149626	0.7025974039913	0.5775411098398762	0.0758725960174439	0.3930702276652413	1.9489877603470118	0.0769749487725985	0.022544586159729735	7.950805072540442e-11	10.099588893876911	-0.29534862602366263	
SST(ph)PPLHVHVDENTPVHVHIK	ddPTM_K562_Methotrexat_30min_R1	1	SSTPPLHVHVDENTPVHVHIK	21	0	Q5BJF6-9;Q5BJF6-3;Q5BJF6-4	Q5BJF6-9			1	S(0.339)S(0.099)T(0.551)PPLHVHVDENT(0.011)PVHVHIK	62.203	0.008257899999999999	30852000.0	4115.9	2499.2	5388.4	4254.5	2744.9	2827.5	2172.3	3307.8	3345.9	4692.4	True	False	3934.969964239503	2912.1503208634367	4257.448476842897	3881.5145905373793	3105.902462412617	3373.8743580232317	2659.493572321495	3191.462799121113	3190.3498393046025	3842.5608897143297	1.0240488250355464	0.7578670590903601	1.107971636373838	1.0101374322856718	0.8082897191626601	0.8780275589267391	0.6921148808442724	0.8305562073626317	0.8302665672376073	1.0	11.907852405890534	-7.767207885205483	24.969413640658622	0.825923155626959	0.9689938305899687	0.26177484987122523	0.10949280756515903	180.68986433352435	782128.4005145495	0.03317734617103514	0.038637817020535085	1.7091969721628818e-08	7.767207885205483	0.14307067496300974	
SSTFPQTDVLSS(ph)SLEAEHR	ddPTM_K562_Methotrexat_30min_R1	2	SSTFPQTDVLSSSLEAEHR	19	0	D4PHA4;Q86WP2-4;Q86WP2-3;Q86WP2;Q86WP2-2	D4PHA4	GPBP1	Vasculin	1	SSTFPQTDVLS(0.024)S(0.653)S(0.323)LEAEHR;SSTFPQTDVLS(0.01)S(0.636)S(0.354)LEAEHR	145.72	2.7591e-12	125862000.0	4968.0	4632.3	5093.799999999999	5269.9	4301.2	4178.6	4071.2	4525.2	4455.4	5635.3	True	False	4749.612668515239	5397.708839362877	4024.6809908956884	4807.896049047581	4866.883191128695	4986.055311206322	4984.270235066641	4366.046151092225	4248.26942647351	4614.692562826523	1.0292370735107168	1.169678969048537	0.872144988230928	1.0418670330884883	1.0546494972024105	1.0804739954664146	1.0800871709671924	0.9461185315491526	0.9205964143083507	1.0	12.172018821404254	-9.273161961154592	23.809444693939945	0.9500180789029795	1.0462781021663303	0.2522247951398361	0.07184810237962644	562.9214295938351	1143324.9067035925	0.038911029896994624	0.018957346612639918	5.331360363394468e-10	9.273161961154592	0.09626002326335081	
SSTFPQTDVLSSS(ph)LEAEHR	ddPTM_K562_Methotrexat_30min_R1	3	SSTFPQTDVLSSSLEAEHR	19	0	D4PHA4;Q86WP2-4;Q86WP2-3;Q86WP2;Q86WP2-2	D4PHA4	GPBP1	Vasculin	1	SSTFPQTDVLS(0.004)S(0.175)S(0.821)LEAEHR;SSTFPQTDVLSS(0.033)S(0.966)LEAEHR;SSTFPQTDVLS(0.001)S(0.067)S(0.932)LEAEHR	235.21	1.1766e-56	77620000.0	8738.0	7113.59	8528.4	9005.0	7502.82	6697.1900000000005	6432.48	7736.700000000001	8229.880000000001	9454.6	True	False	8353.887982585778	8288.989837144261	6738.405387481804	8215.545631164443	8489.572338897091	7991.327183663872	7875.127382998	7464.595875796694	7847.274675123635	7742.280323052833	1.0789958040800807	1.0706135003228425	0.8703385961650126	1.061127379578656	1.0965209195047068	1.032167120049825	1.0171586476337742	0.964134023095324	1.0135611664380295	1.0	12.918542828582249	-9.901471485160346	0.006019864285899675	1.2388626459595113e-08	2.0177671137688367	0.044474680466333405	0.061594072364382454	14702.888705672935	65.00853071022713	10963.34826464854	10820.647184060914	1.2546671138921844e-10	9.901471485160346	2.01776710138021	
SSTPLPTISSS(ph)AENTR	ddPTM_K562_Methotrexat_30min_R1	2	SSTPLPTISSSAENTR	16	0	G5E972;P42167;H0YJH7;P42167-2;P42167-3;P42166	G5E972;P42166	TMPO	Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin	1	SSTPLPTISS(0.006)S(0.994)AENTR;SSTPLPTISS(0.002)S(0.998)AENTR	315.47	4.383099999999998e-247	106965000.0	5198.0	4189.7	6232.1	4919.299999999999	4296.3	4433.4	4837.8	4885.5	4857.700000000001	5796.7	True	False	4969.502143909459	4881.976712276549	4924.067376685586	4488.032606705966	4861.3387552418435	5290.091805078761	5922.79979937252	4713.674195872241	4631.866587282934	4746.861458828545	1.0469027139325566	1.02846412405753	1.0373311754290744	0.9454736873263508	1.0241164182705154	1.1144398990705486	1.247729652685962	0.9930085882547551	0.9757745464991957	1.0	12.21275822876739	-8.11097563374595	7.122179298642103	1.07682773754166	1.0132962784050301	0.08600257491895569	0.077658905257325	0.6000883120480136	34.21655293284431	0.027474491685745527	0.02753220854938324	7.745052504897815e-09	8.11097563374595	-0.06353145913662983	
SSTPSSPT(ph)GTSSSDSGGHHIGWGER	ddPTM_K562_Methotrexat_30min_R1	2	SSTPSSPTGTSSSDSGGHHIGWGER	25	0	P46019	P46019	PHKA2	Phosphorylase b kinase regulatory subunit alpha, liver isoform	1	SST(0.011)PS(0.321)S(0.257)PT(0.403)GT(0.006)SSSDSGGHHIGWGER;S(0.079)S(0.079)T(0.07)PS(0.016)S(0.058)PT(0.657)GT(0.037)S(0.002)S(0.001)SDSGGHHIGWGER	120.33	2.4885e-09	21205000.0	1426.53	1033.51	1977.8799999999999	1241.76	1517.25	1260.91	1132.65	1459.43	1571.05	1742.5900000000001	True	False	1363.821449278793	1204.2799608336961	1562.7500173294538	1132.8968287567752	1716.7949692504449	1504.5630121220408	1386.6755948487507	1408.1010196872019	1498.0122284107406	1426.9900649576537	0.9557329674325832	0.8439301649023279	1.0951372793025218	0.793906598635215	1.2030882424548563	1.0543612384341927	0.9717485979062516	0.986763015570811	1.0497706082173701	1.0	10.478759575126626	-7.752678976613142	24.999958553586957	1.0405034065181273	0.9289420870138233	0.28349587248813723	0.09474587585362487	278.42158946866783	794540.2189691783	0.027609455101876807	0.03509293346645485	1.7673437295889357e-08	7.752678976613142	-0.11156131950430404	
SSTRPPS(ph)IADPDPSDLPVDR	ddPTM_K562_Methotrexat_30min_R1	1	SSTRPPSIADPDPSDLPVDR	20	1	Q9NX94;Q9NX94-2	Q9NX94	WBP1L	WW domain binding protein 1-like	1	S(0.32)S(0.087)T(0.1)RPPS(0.493)IADPDPSDLPVDR	57.693999999999996	0.026693	22715000.0	1323.5	1451.8	2041.0	1794.0	1073.6	1294.8	1450.0	1371.4	1393.3	1609.8	True	False	1265.3205247141543	1691.6852736193746	1612.62199191529	1636.7228053646868	1214.797217984694	1545.001774984431	1775.1994107011756	1323.1670846830812	1328.525787113513	1318.2496207190618	0.9598489579112972	1.2832814415653813	1.223305485220362	1.2415879205577987	0.9215229034710908	1.1720100280716814	1.3466337352199371	1.003730298030609	1.0077953114743516	1.0	10.36440786629407	-9.413704388793827	23.50426780982688	1.0042140925397454	1.1655970803716413	0.2546003466132277	0.12558096930001392	22.862370581168005	4894.932677441972	0.06932803287256219	0.03330406732346673	3.857408305213361e-10	9.413704388793827	0.16138298783189597	
SSTVPSSNT(ph)ASGGMTRR	ddPTM_K562_Methotrexat_30min_R1	1	SSTVPSSNTASGGMTRR	17	1	J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;H0YKP9;P27448-6;P27448-7;H0YIY6;A2SY06	J3KNR0;P27448-6	MARK3	MAP/microtubule affinity-regulating kinase 3	1	SSTVPS(0.013)S(0.025)NT(0.775)AS(0.182)GGMT(0.005)RR	61.861999999999995	0.02455	1979300.0	2205.5	1900.3	2360.6	2347.1	1556.6	1784.7	2066.9	2028.4	2006.5	2202.2	True	False	2108.5488607911348	2214.2922754228525	1865.1423195077089	2141.3333871078353	1761.3201839744536	2129.568016539012	2530.454939295354	1957.0600222919359	1913.2182529557613	1803.3602402456938	1.1692333088722535	1.2278701870022222	1.0342594218743548	1.1874129967599236	0.9766879321540811	1.1808888590384332	1.4031888265156602	1.0852296610605663	1.0609185066069218	1.0	10.816471903785683	-9.51098784835337	24.928424939586776	1.0446641184281389	1.1655057986086148	0.2140890704731815	0.1078192392920445	968.5338778969589	2030484.9845099424	0.0667320087624528	0.02918403547994901	3.083274219672942e-10	9.51098784835337	0.12084168018047592	
ST(ph)SPPPSPEVWADSR	ddPTM_K562_Methotrexat_30min_R1	1	STSPPPSPEVWADSR	15	0	Q08495-3;Q08495-2;Q08495;E5RFK4;E5RJ61;E5RGQ7;E5RJC0;E5RGQ0	Q08495-3	DMTN	Dematin	1	S(0.114)T(0.507)S(0.379)PPPSPEVWADSR	95.98100000000001	0.011804	6785200.0	702.58	577.49	712.8	839.84	701.7	748.6	737.0	948.32	897.19	822.32	True	False	671.6954244455384	672.9104068483624	563.193020988348	766.2125311357187	793.985849347857	893.25635523119	902.2910108184603	914.9670480871072	855.4798327283232	673.3898795562799	0.9974836938270322	0.99928797161574	0.8363550419846755	1.137843847075045	1.1790878857149472	1.3265069499110795	1.3399236285122245	1.3587478455868849	1.2704079147908025	1.0	9.395298228695431	-7.630536119797864	2.1507537334733806	1.2808002746180684	0.9513092135527881	0.5926966204179879	0.10921414997558539	0.19122512265508776	1.8022858362783654	0.03432157149498591	0.04854119698732641	2.3413367406512165e-08	7.630536119797864	-0.32949106106528037	
ST(ph)SPVTDPSIPIRK	ddPTM_K562_Methotrexat_30min_R1	1	STSPVTDPSIPIRK	14	1	A0A087WU18;Q99607	A0A087WU18	ELF4	ETS-related transcription factor Elf-4	1	S(0.088)T(0.456)S(0.456)PVTDPSIPIRK	190.03	2.315e-05	9238300.0	3181.5	2126.8	3862.7	3575.9	2283.3	2355.1	2275.7	2499.3	2861.4	3572.2	True	False	3041.645069420537	2478.21755058113	3051.9720569187607	3262.406398942911	2583.5939715205395	2810.1897437950524	2786.083654436321	2411.3982023832755	2728.3741385535104	2925.2399646742683	1.0397933523922815	0.8471843611151691	1.043323656785403	1.1152611198877105	0.8832075326197139	0.9606698177692827	0.9524290957602028	0.8243420134771028	0.9327009652205818	1.0	11.514339262057451	-7.819852905491704	24.999996927382853	0.9198744366581324	1.0019472580463618	0.22291970999451283	0.07727593973683915	128.71746732600226	55087.77451777414	0.024621002693612486	0.027917604429124398	1.5140739748566098e-08	7.819852905491704	0.08207282138822936	
ST(ph)T(ph)VT(ph)FT(ph)VR	ddPTM_K562_Methotrexat_30min_R1	1	STTVTFTVR	9	0	H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;Q9UPX8;Q9UPX8-3	H7C1X5	SHANK2	SH3 and multiple ankyrin repeat domains protein 2	4	S(0.711)T(0.763)T(0.763)VT(0.763)FT(1)VR	52.79	0.031593	1185100.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
STAGDTHLGGEDFDNR	ddPTM_K562_Methotrexat_30min_R1	7	STAGDTHLGGEDFDNR	16	0	E9PKE3;P11142-2;P11142;E9PN89;P54652	E9PKE3	HSPA8;HSPA2	Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2	0	;;;;;;	297.5	1.1742999999999995e-193	2428949000.0	39113.49999999999	33407.899999999994	45010.00000000001	42080.50000000001	34761.899999999994	34448.3	34963.299999999996	42046.0	42294.700000000004	45734.399999999994	False	True	37394.1173731825	38927.987637793536	35563.01609804373	38391.36789919103	39333.699154118956	41104.94643589447	42804.71003873685	40567.21834810034	40328.42862860108	37451.45698460299	0.9984689617964911	1.0394251858825565	0.949576303871552	1.0250967783436156	1.0502581827534718	1.0975526653821104	1.1429384457949041	1.0831946635555005	1.0768186841217118	1.0	15.192734224897663	-7.863766059057947	2.400152431245848	1.0884468087242276	0.999622981189716	0.45557816353458724	0.03943037366004608	0.238897921465727	2.8078524700570773	0.013158753108567366	0.015664304260705676	1.3684657770817481e-08	7.863766059057947	-0.08882382753451157	
STAPSAAASASAS(ph)AAASSPAGGGAEALELLEHCGVCR	ddPTM_K562_Methotrexat_30min_R1	1	STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR	37	0	Q13263;Q13263-2	Q13263	TRIM28	Transcription intermediary factor 1-beta	1	STAPSAAAS(0.014)AS(0.041)AS(0.376)AAAS(0.284)S(0.284)PAGGGAEALELLEHCGVCR	72.633	2.6152e-08	5803500.0	1196.8	1134.9	1615.7	1194.6	1291.7	1106.0	1153.8	1218.6	1488.8	1565.9	True	False	1144.1901050078568	1322.4229349983661	1276.5866498469056	1089.8712727361512	1461.5811908260325	1319.7188470287163	1412.5690207358732	1175.741147290945	1419.5860129581554	1282.3003361187598	0.8922949427519202	1.031289548750372	0.9955441903032263	0.8499344826150098	1.1398119065069547	1.0291807697900275	1.1015898389385188	0.916899975905531	1.107062029832207	1.0	10.324518489429115	-7.76486398846453	24.9999688488387	1.046565192455159	0.9524302396855343	0.3214281818962197	0.07540915751943475	120.36393844358668	878668.8742767415	0.022531201456518622	0.02657706568168295	1.7184464827562346e-08	7.76486398846453	-0.0941349527696248	
STAPSAAASASASAAAS(ph)SPAGGGAEALELLEHCGVCR	ddPTM_K562_Methotrexat_30min_R1	9	STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR	37	0	Q13263;Q13263-2	Q13263	TRIM28	Transcription intermediary factor 1-beta	1	STAPSAAASASASAAAS(0.5)S(0.5)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.558)S(0.442)PAGGGAEALELLEHCGVCR;STAPSAAASASAS(0.001)AAAS(0.551)S(0.448)PAGGGAEALELLEHCGVCR;STAPSAAAS(0.005)AS(0.012)AS(0.101)AAAS(0.441)S(0.441)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.557)S(0.442)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.551)S(0.448)PAGGGAEALELLEHCGVCR;STAPSAAASASAS(0.001)AAAS(0.499)S(0.499)PAGGGAEALELLEHCGVCR;STAPSAAASASAS(0.001)AAAS(0.545)S(0.455)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.559)S(0.441)PAGGGAEALELLEHCGVCR	161.26	1.6637e-58	645503000.0	8546.24	8096.830000000001	10129.56	9329.800000000001	6937.08	8124.029999999999	7705.100000000001	8073.68	8667.01	9517.54	True	False	8170.557522578837	9434.693534921858	8003.50378462785	8511.87091944898	7849.427612646476	9693.883819915636	9433.164813374919	7789.724098194613	8264.082596835342	7793.821279151765	1.0483378088787882	1.210535011902233	1.0269036840807446	1.0921306268874775	1.0071346687976352	1.243790879044979	1.2103388665850405	0.9994743039633059	1.0603377086592314	1.0	12.92811513397277	-9.291967052893895	24.97990996206679	1.0224294848857096	1.119154227251826	0.2542238299229941	0.07840295244931439	1085.3357139044606	888092.705930126	0.04410178902179994	0.02118888025333733	5.105437301484056e-10	9.291967052893895	0.09672474236611639	
STAPSAAASASASAAASS(ph)PAGGGAEALELLEHCGVCR	ddPTM_K562_Methotrexat_30min_R1	7	STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR	37	0	Q13263;Q13263-2	Q13263	TRIM28	Transcription intermediary factor 1-beta	1	STAPSAAASASASAAAS(0.22)S(0.78)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.185)S(0.815)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.196)S(0.804)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.321)S(0.679)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.199)S(0.801)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.209)S(0.791)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.168)S(0.832)PAGGGAEALELLEHCGVCR	206.27	3.0274e-69	3271455900.0	15665.72	14689.27	17567.57	18173.5	13503.279999999999	14041.35	14918.960000000001	15876.62	15749.78	17575.42	True	False	14977.07370640348	17116.422192601498	13880.377132048643	16580.257471179	15279.198004534603	16754.642163405657	18264.916551913397	15318.230275646129	15017.576165480985	14392.341128698106	1.0406280376817518	1.1892729639705117	0.9644280251509176	1.1520194889015118	1.0616200566611167	1.164135981323925	1.2690719590778345	1.0643320734735653	1.0434422052112264	1.0	13.813013666557804	-6.014265612875787	18.327858240891526	1.1067788723889673	1.0044050062415462	0.036605620751295365	0.08831701227785681	35195852.051598735	1652680347.5778778	0.021800596052179752	55776725.65717087	9.676858422122914e-07	6.014265612875787	-0.10237386614742117	
STAQQELDGKPAS(ph)PTPVIVASHTANKEEK	ddPTM_K562_Methotrexat_30min_R1	2	STAQQELDGKPASPTPVIVASHTANKEEK	29	2	H0YAC7;P35606-2;P35606	H0YAC7	COPB2	Coatomer subunit beta	1	STAQQELDGKPAS(0.865)PT(0.135)PVIVASHTANKEEK;STAQQELDGKPAS(0.808)PT(0.191)PVIVASHTANKEEK	100.27	1.8849e-08	47192000.0	5212.799999999999	2766.1	11055.5	5845.799999999999	3310.8	2607.5	2195.8999999999996	3444.7	3657.7	8020.0	True	False	4983.651553630476	3223.151009339133	8735.101632346637	5333.307790190014	3746.2282314676995	3111.362471634154	2688.3864730749738	3323.547948525455	3487.6543253607215	6567.500284611061	0.7588353768797159	0.49077287699425104	1.3300496770155747	0.8120757608015639	0.5704191959071316	0.47375140263407156	0.409346989961217	0.5060598103532905	0.531047457056527	1.0	12.681128642542038	-7.74980755367585	4.886746781421493	0.5410417752343056	0.8606145811620206	0.21177668765996782	0.24539716543943974	0.25686174842907583	16.10299258947538	0.0749824247315323	0.09268852023088187	1.7790675830066476e-08	7.74980755367585	0.319572805927715	
STCS(ph)CPDLQPNGQDLGENSR	ddPTM_K562_Methotrexat_30min_R1	2	STCSCPDLQPNGQDLGENSR	20	0	F5H7V1;O43847;O43847-2	F5H7V1	NRD1	Nardilysin	1	S(0.054)T(0.054)CS(0.892)CPDLQPNGQDLGENSR;S(0.016)T(0.016)CS(0.967)CPDLQPNGQDLGENSR	112.44	0.00015445	21550400.0	2497.53	2494.84	2815.24	2640.2599999999998	2487.3	2377.98	2353.46	2944.94	2695.16	3014.2299999999996	True	False	2387.7415716579826	2907.0699049707678	2224.359596530916	2408.7925050680988	2814.4235472180785	2837.4909799795178	2881.283313868131	2841.3647909921197	2569.8625998685525	2468.3237385141147	0.967353485444887	1.1777506571000975	0.9011620160773316	0.9758819183573332	1.140216537767574	1.1495619216009465	1.1673036518307807	1.1511313312177474	1.0411367681516372	1.0	11.269315911450324	-7.766216561532737	24.998037367520574	1.1208023868676318	1.0103826316200861	0.2623940109813937	0.08258878735137025	154.54086401568816	808680.6309885343	0.025226187342682643	0.029531704689765015	1.7131028534262526e-08	7.766216561532737	-0.11041975524754566	
STDEYS(ph)EADEEEEEEEGKPSR	ddPTM_K562_Methotrexat_30min_R1	1	STDEYSEADEEEEEEEGKPSR	21	1	Q96T23-3;Q96T23-2;Q96T23	Q96T23-3	RSF1	Remodeling and spacing factor 1	1	S(0.005)T(0.005)DEY(0.071)S(0.92)EADEEEEEEEGKPSR	71.202	0.0053305	7537600.0	783.26	491.43	839.32	515.14	550.45	379.79	414.25	578.17	566.24	873.62	True	False	748.8288282490424	572.6304546182455	663.1582019864485	469.9784760064463	622.8438232485794	453.17904241684994	507.15610750549126	557.8354333901246	539.9156259923603	715.3989524491168	1.0467289974153315	0.8004351315554578	0.9269767585151951	0.6569459941163023	0.8706244552306351	0.6334633855213572	0.7089136848317695	0.7797543335511119	0.7547056424167216	1.0	9.482604195586797	-3.00000447874517	0.8281367383660129	0.7633951478180592	85.01065526175998	0.31846187993958686	0.11006684127552506	632.6469408591169	1.9295001179627793	0.03572356722186487	100245.98417778985	0.0009999896873613121	3.00000447874517	84.24726011394192	
STDS(ph)PIIIEPLSKPDYR	ddPTM_K562_Methotrexat_30min_R1	2	STDSPIIIEPLSKPDYR	17	1	A0A0D9SEJ8;Q86YH2	A0A0D9SEJ8	ZNF280B	Zinc finger protein 280B	1	S(0.034)T(0.034)DS(0.932)PIIIEPLSKPDYR;S(0.032)T(0.032)DS(0.935)PIIIEPLSKPDYR	179.07	1.0695e-10	75590000.0	6307.4	4157.4	7699.3	6255.1	4866.5	4266.5	3852.1	5174.8	5913.6	6912.200000000001	True	False	6030.1342482675145	4844.339686282674	6083.32214715992	5706.725094669264	5506.53004966702	5090.940742177229	4716.031482732416	4992.79935089544	5638.678026752649	5660.333599412537	1.0653319530307113	0.8558399608788867	1.0747285544780052	1.008195894189265	0.9728278294831456	0.8994064842230495	0.8331720030108957	0.8820680377237168	0.9961741525866716	1.0	12.466671367407464	-8.13709585202794	4.076760395612287	0.9094663334424959	0.9953306251894602	0.19642770205195625	0.07300091155775504	0.3596319348621439	10.162829115197297	0.024527781359515412	0.02463688777803587	7.2929653131238905e-09	8.13709585202794	0.0858642917469643	
STDSEVSQS(ph)PAK	ddPTM_K562_Methotrexat_30min_R1	4	STDSEVSQSPAK	12	0	A0A0G2JNJ7;H7C148;H7C3F5;A0A2H2FJL5;B7Z6J7;O75175	A0A0G2JNJ7	CNOT3	CCR4-NOT transcription complex subunit 3	1	STDSEVS(0.054)QS(0.945)PAK;STDS(0.01)EVS(0.163)QS(0.827)PAK;STDSEVSQS(1)PAK;STDSEVS(0.107)QS(0.893)PAK	193.51	1.0269e-06	85378000.0	14135.800000000001	10638.800000000001	21162.5	14908.6	10487.099999999999	9748.0	9507.5	12999.400000000001	13544.8	17697.5	True	False	13514.407157728996	12396.6808713196	16720.780452673862	13601.586185094753	11866.337467145375	11631.663038730492	11639.798894649264	12542.203733869936	12915.105204403288	14492.311257718733	0.9325225574720598	0.8553970895923877	1.1537690679785964	0.9385380939738255	0.8188022777129672	0.8026092478889705	0.8031706390828313	0.8654384736037081	0.8911694604630154	1.0	13.82300007617955	-7.6062755121790815	5.75829881908449	0.8516274619300838	0.9801610256309115	0.2617239403819327	0.08816230295156856	0.25406005986131674	13.562178643621886	0.026369816322003484	0.03426697384405575	2.47585090368331e-08	7.6062755121790815	0.1285335637008277	
STELLIR	ddPTM_K562_Methotrexat_30min_R1	1	STELLIR	7	0	K7EMV3;A0A590UJJ6;B4DEB1;K7EK07;K7ES00;Q71DI3;Q16695;P84243;P68431;K7EP01;Q5TEC6;Q6NXT2	K7EMV3	H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;HIST2H3PS2;H3F3C	Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C	0		120.65	0.032558	39030000.0	4802.2	4031.1	6066.2	5086.9	4207.5	4911.8	4556.3	4820.0	4473.2	4987.4	False	True	4591.101037991923	4697.170758015609	4792.9875195279465	4640.9393749217525	4760.859998761735	5860.935834390279	5578.166258605356	4650.4778679979945	4265.241908358694	4084.133531105885	1.1241309822572727	1.1501021507354408	1.1735628825608257	1.1363338978941508	1.1656964598492472	1.435050002589724	1.365813878542537	1.138669397701783	1.0443443819535863	1.0	11.995814320690476	-9.662542950682052	3.3921872243144584	1.0159244219710906	1.2212246520042132	0.3951975233141042	0.09769737522707801	0.28037507172911463	5.970770626996385	0.09265022554674536	0.02900200070973457	2.1749889221977491e-10	9.662542950682052	0.2053002300331226	
STETSDFENIES(ph)PLNER	ddPTM_K562_Methotrexat_30min_R1	2	STETSDFENIESPLNER	17	0	Q96K76-2;Q96K76-4;Q96K76	Q96K76-2	USP47	Ubiquitin carboxyl-terminal hydrolase 47	1	STETSDFENIES(1)PLNER;STETSDFENIES(1)PLNER	289.32	3.047599999999999e-171	56160000.0	2551.7	2151.2200000000003	3051.7	2528.1000000000004	2394.8	2203.3	1846.32	2762.8	2660.5	2898.5	True	False	2439.530323319308	2506.6725405121038	2411.1898739480125	2306.465398128464	2709.7581758846363	2629.0565421865895	2260.404259286755	2665.6307580300513	2536.813935703366	2373.553562960743	1.0277966174381448	1.0560842525859453	1.015856524821931	0.9717351376100425	1.141646103197484	1.1076457608595676	0.9523291551369724	1.123054815205002	1.06878310028065	1.0	11.212832891474267	-7.741472393777458	24.99998767606088	1.0681703681298684	1.0204542006245945	0.14523614987591227	0.056350838265430976	507.9519524406595	635986.7303663791	0.01680928376680522	0.021673288314923853	1.8135419512279767e-08	7.741472393777458	-0.047716167505273965	
STFAGS(ph)PERESIHILSVDEK	ddPTM_K562_Methotrexat_30min_R1	1	STFAGSPERESIHILSVDEK	20	1	H0YE03;H7C3G7;Q2TBE0-3;Q2TBE0-2;Q2TBE0	H0YE03	CWF19L2	CWF19-like protein 2	1	S(0.173)T(0.173)FAGS(0.65)PERES(0.004)IHILSVDEK	67.194	0.014048	15564000.0	4034.1	3248.0	6063.0	4567.5	2793.4	2741.1	2788.0	3690.0	3958.0	4838.4	True	False	3856.765794294951	3784.6767934396808	4790.459155797357	4167.07436650123	3160.7810625171815	3270.778780823158	3413.279970368882	3560.220608488088	3773.9934439067547	3962.1188749454045	0.9734099142464762	0.9552153564528856	1.2090649743221968	1.0517287587840607	0.7977501842522923	0.8255125310616096	0.8614784356806848	0.8985648136408189	0.9525189836609226	1.0	11.952056450533465	-7.743294043078923	24.895565780423095	0.8796515414151366	1.0523241784980706	0.45737529861577475	0.08387245129441112	206.09823155627024	282767.44692499196	0.02581302661174039	0.03325606878968618	1.805950976243561e-08	7.743294043078923	0.172672637082934	
STFREES(ph)PLR	ddPTM_K562_Methotrexat_30min_R1	2	STFREESPLR	10	1	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4;E9PJA7	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	STFREES(1)PLR;STFREES(1)PLR	132.03	0.0023468000000000004	1760630000.0	10854.5	10180.3	12720.0	11083.3	10147.4	9286.0	9534.900000000001	11001.599999999999	10583.099999999999	11123.7	True	False	10377.349176811314	11862.421539487064	10050.245829085008	10111.64429693335	11481.960962907864	11080.388077313424	11673.344042134248	10614.667492233755	10091.093990957455	9109.090139143149	1.1392300458437954	1.302261955726229	1.1033204936569427	1.1100608449884661	1.2604948230304722	1.216409971584243	1.2815049432843033	1.1652829569246341	1.1078048231836555	1.0	13.15309124238854	-9.979978000226334	2.140256153432064	1.0019329386990963	1.2017540448592283	0.4779617892876141	0.065438066667988	0.26930988600258354	2.8236376485850467	0.06379543175997916	0.017748695717869363	1.0471815931055832e-10	9.979978000226334	0.19982110616013204	
STFVQSPADACTPPDTSSASEDEGS(ph)LRR	ddPTM_K562_Methotrexat_30min_R1	1	STFVQSPADACTPPDTSSASEDEGSLRR	28	1	Q9P265	Q9P265	DIP2B	Disco-interacting protein 2 homolog B	1	STFVQSPADACT(0.001)PPDT(0.192)S(0.112)S(0.112)AS(0.112)EDEGS(0.47)LRR	58.928999999999995	0.0019090999999999997	19816000.0	980.6	826.37	1124.0	1062.2	981.8	1188.1	679.6	980.96	895.0	1317.8	True	False	937.4939981372868	962.913596611684	888.0877603688324	969.0785751718895	1110.9239089208018	1417.6835100857295	832.0175996638065	946.4590807865792	853.3916453503147	1079.1336502569143	0.868746885906202	0.8923024468585877	0.8229636432497507	0.8980153430867219	1.0294590560273225	1.3137237540023101	0.7710051479404098	0.8770545525674706	0.7908118194137898	1.0	10.075657837738476	-7.550477367811612	10.647458612487078	0.9652997087177734	0.8637657835162965	0.09606446998407125	0.14325070594104194	1.26449633736773	477.71921440446124	0.04558883912248636	0.05907344832962587	2.8152867230514565e-08	7.550477367811612	-0.10153392520147686	
STGS(ph)ATSLASQGER	ddPTM_K562_Methotrexat_30min_R1	2	STGSATSLASQGER	14	0	Q5SW79-2;H0Y2V6;Q5SW79-3;Q5SW79	Q5SW79-2	CEP170	Centrosomal protein of 170 kDa	1	S(0.029)T(0.001)GS(0.808)AT(0.152)S(0.009)LAS(0.002)QGER;S(0.301)T(0.044)GS(0.453)AT(0.064)S(0.137)LAS(0.002)QGER	162.64	1.0128e-05	119983000.0	2401.1000000000004	2128.88	2744.3999999999996	2317.95	1837.94	1949.1299999999999	2237.13	2427.1	2489.5	2358.69	True	False	2295.5505189959613	2480.6412352271755	2168.3879444450376	2114.7389223495397	2079.6613252820307	2325.771786897901	2738.8633501116706	2341.7375173066234	2373.7636883794526	1931.5083848265917	1.188475565019125	1.284302597241836	1.1226396745048108	1.0948639617422102	1.0767032344354746	1.2041220246148223	1.4179919546958437	1.2123879635743138	1.2289688758418544	1.0	10.91551222509576	-8.518861011332154	24.99829758439786	1.2437534360385523	1.1541793230635746	0.04422863061693805	0.10936227849300843	373.5232420528215	2324088.1332851434	0.04111634153085844	0.032612775980378185	3.0278822960234864e-09	8.518861011332154	-0.08957411297497764	
STGSAT(ph)SLASQGER	ddPTM_K562_Methotrexat_30min_R1	1	STGSATSLASQGER	14	0	Q5SW79-2;H0Y2V6;Q5SW79-3;Q5SW79	Q5SW79-2	CEP170	Centrosomal protein of 170 kDa	1	S(0.014)T(0.002)GS(0.257)AT(0.69)S(0.036)LAS(0.001)QGER	165.78	5.221e-05	36079000.0	544.33	415.09	360.73	616.43	471.1	442.0	530.29	506.9	563.32	549.18	True	False	520.4019049623387	483.6765671763782	285.0177026671254	562.3885389693164	533.0579074074043	527.410244472597	649.2210313798118	489.07203968634514	537.1313761550164	449.71818033699486	1.1571733759404106	1.0755103714373673	0.6337695808818498	1.2505354765686643	1.185315450240324	1.1727572233735	1.443617491499499	1.08750782394401	1.19437327562012	1.0	8.812877397445998														
STGTEPPGEVRLADS(ph)AASR	ddPTM_K562_Methotrexat_30min_R1	3	STGTEPPGEVRLADSAASR	19	1	O43586-2	O43586-2			1	STGTEPPGEVRLADS(1)AASR;STGTEPPGEVRLADS(0.997)AAS(0.003)R;STGTEPPGEVRLADS(0.992)AAS(0.007)R	99.711	0.0016975999999999998	276070000.0	3577.3700000000003	3044.0	4198.07	3507.77	2971.2	2868.06	2760.74	3324.92	3691.2	3888.32	True	False	3420.113098221892	3546.9692608467944	3316.9524770209823	3200.2492502642654	3361.9648789829744	3422.2720039865962	3379.9062214477012	3207.980679017405	3519.5969176727203	3184.1075694088377	1.0741198353599817	1.1139602489953961	1.0417212373377225	1.0050694521160366	1.055857820659984	1.0747978607462612	1.061492474035736	1.0074975826312926	1.1053636979752446	1.0	11.636673360251955	-9.65225773177907	0.006715402208182318	4.230396300099323e-08	2.0879808599493925	0.17668360340021272	0.03485266876003261	4440.411445559791	27.646034474711875	4311.264326541673	4281.494166884343	2.227113078203842e-10	9.65225773177907	2.0879808176454295	
STIGVMVT(ph)ASHNPEEDNGVK	ddPTM_K562_Methotrexat_30min_R1	3	STIGVMVTASHNPEEDNGVK	20	0	D6RC77;D6RCQ8;D6RF77;A0A494C163;A0A494C099;A0A494C0G1;H0Y987;O95394;O95394-3;O95394-4	D6RC77	PGM3	Phosphoacetylglucosamine mutase	1	S(0.001)T(0.001)IGVMVT(0.87)AS(0.128)HNPEEDNGVK;STIGVMVT(0.981)AS(0.019)HNPEEDNGVK;STIGVMVT(0.626)AS(0.374)HNPEEDNGVK	119.18	9.7698e-05	217197000.0	8589.0	6550.5	11233.9	7820.700000000001	6249.5	5623.18	5478.51	8488.3	9318.6	10548.4	True	False	8211.437844178214	7632.8587855377555	8876.057910326892	7135.071373420069	7071.418790792979	6709.779951387827	6707.20532656586	8189.761677785761	8885.380319956921	8637.982543914128	0.950619870141271	0.8836390611735456	1.0275614549117722	0.8260113211790487	0.8186424034597213	0.7767762804886875	0.7764782219074299	0.9481104686366657	1.0286406895111286	1.0	13.076478685736546	-9.50449970116097	6.453584019993638	1.0071693031357736	0.8653754571088229	0.40325909002428395	0.07343412710232151	0.17255335993871113	31.107830123952365	0.04918752878218436	0.021242011988288338	3.1296826251047254e-10	9.50449970116097	-0.14179384602695067	
STIGVMVTAS(ph)HNPEEDNGVK	ddPTM_K562_Methotrexat_30min_R1	2	STIGVMVTASHNPEEDNGVK	20	0	D6RC77;D6RCQ8;D6RF77;A0A494C163;A0A494C099;A0A494C0G1;H0Y987;O95394;O95394-3;O95394-4	D6RC77	PGM3	Phosphoacetylglucosamine mutase	1	STIGVMVT(0.007)AS(0.993)HNPEEDNGVK;STIGVMVT(0.002)AS(0.998)HNPEEDNGVK	113.67	0.001228	74838000.0	5806.4	4125.7	7372.5	5330.0	4165.9	3990.2	3286.2	5467.9	5527.7	6967.0	True	False	5551.157608387049	4807.401800090546	5825.113001173676	4862.727175358853	4713.788869599884	4761.249677589495	4023.2140023766915	5275.590857764778	5270.718433522834	5705.208788389681	0.9729981520893447	0.8426338068247026	1.021016621342238	0.8523311513602604	0.8262254799846458	0.8345443355690717	0.7051826062113776	0.9246972465759373	0.9238432157380372	1.0	12.478063969153716	-7.390554565200847	21.095542622531188	0.8537861854686097	0.9355187466909741	0.13888714098615884	0.08477761117868741	8.6356557862938	1394.757681929045	0.02375930019896289	0.035240717700919556	4.068604122413759e-08	7.390554565200847	0.08173256122236439	
STNGDTFLGGEDFDQALLR	ddPTM_K562_Methotrexat_30min_R1	2	STNGDTFLGGEDFDQALLR	19	0	P38646	P38646	HSPA9	Stress-70 protein, mitochondrial	0	;	180.7	4.3318e-11	22621000.0	994.47	1003.8	1673.4	1225.8600000000001	1046.08	1078.96	1099.1	977.8399999999999	1096.68	1648.1599999999999	False	True	950.7542895447558	1169.660888317349	1322.1762083640606	1118.3907570704325	1183.6578556160848	1287.4537497198044	1345.6011533114918	943.448812955012	1045.6955861707083	1349.662253003063	0.7044386752532215	0.8666322894596761	0.9796348719260359	0.8286449106670648	0.8770030079617249	0.9539080957885266	0.9969910252120225	0.6990258569177537	0.7747831606344371	1.0	10.39838270906372	-3.026249831179803	22.33413030886761	0.8679190833355894	0.004338033048859269	0.0	0.10933030797888087	0.0	0.0	0.025377346035731406	0.0	0.0009413479232365788	3.026249831179803	-0.8635810502867302	
STPAEDDSRDS(ph)QVKSEVQQPVHPKPLSPDSR	ddPTM_K562_Methotrexat_30min_R1	1	STPAEDDSRDSQVKSEVQQPVHPKPLSPDSR	31	3	Q9UHB6;F8VRN8;F8VS07;F8VQE1;Q9UHB6-3;Q9UHB6-2	Q9UHB6	LIMA1	LIM domain and actin-binding protein 1	1	S(0.06)T(0.06)PAEDDS(0.154)RDS(0.528)QVKS(0.136)EVQQPVHPKPLS(0.06)PDS(0.001)R	47.35	0.006174	43515000.0	2120.8	1266.9	3605.7	3144.1	1302.4	1285.7	1108.6	1260.3	1656.0	2780.3	True	False	2027.5721713742191	1476.233691381999	2848.91284480596	2868.461634530165	1473.6884283748736	1534.1433287747016	1357.2317701402228	1215.974534655159	1579.012921452649	2276.760728342161	0.8905512758253739	0.6483921094584799	1.251300942317472	1.2598871716391802	0.6472741777516295	0.6738272097181677	0.5961240253509206	0.5340809508518619	0.6935348549350717	1.0	11.152766966926082	-7.7921132277427265	24.969491620587412	0.6619275925752629	1.0035777164258137	0.3766496359016862	0.2005782618471641	209.4040018218133	170460.3369304771	0.06521616103608936	0.07395623918418197	1.6139377217553108e-08	7.7921132277427265	0.3416501238505508	
STPFIVPS(ph)SPTEQEGR	ddPTM_K562_Methotrexat_30min_R1	6	STPFIVPSSPTEQEGR	16	0	A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	S(0.002)TPFIVPS(0.497)S(0.497)PT(0.004)EQEGR;STPFIVPS(0.837)S(0.158)PT(0.004)EQEGR;STPFIVPS(0.94)S(0.06)PTEQEGR;STPFIVPS(0.743)S(0.256)PT(0.002)EQEGR;STPFIVPS(0.842)S(0.15)PT(0.008)EQEGR;STPFIVPS(0.839)S(0.138)PT(0.023)EQEGR	218.34	4.358999999999999e-30	876273800.0	20570.9	18440.03	24384.14	20072.4	18845.46	17994.77	16424.34	22076.83	21321.83	22346.800000000003	True	False	19666.627866900173	21486.93153058237	19266.242242989363	18312.683856411448	21323.96831188694	21472.004626534275	20107.91633734879	21300.375375633626	20330.58277718403	18299.57797508061	1.0747039026627356	1.17417634219992	1.0528244022471505	1.0007161848950115	1.1652710429128357	1.17336064557192	1.098818582850964	1.1639817816913232	1.1109864284777022	1.0	14.159522757005272	-6.759753767180596	24.999826207675202	1.1035723422414296	1.124440087971592	0.019669426302564963	0.06421321087309952	269.95107853620107	4003371.330436861	0.017036285048240833	0.04056618122955209	1.7387863925616567e-07	6.759753767180596	0.020867745730162257	
STPFIVPSS(ph)PTEQEGR	ddPTM_K562_Methotrexat_30min_R1	2	STPFIVPSSPTEQEGR	16	0	A6NNK5;Q12888;Q12888-3;Q12888-2;C9JXV0	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	STPFIVPS(0.132)S(0.867)PT(0.001)EQEGR;STPFIVPS(0.363)S(0.626)PT(0.011)EQEGR	226.39	1.0105e-39	426312000.0	6443.1	5565.9	7932.0	6935.6	6200.299999999999	6130.4	5336.8	7216.7	6945.799999999999	6833.5	True	False	6159.869038750107	6485.570370876206	6267.181597193577	6327.566716213674	7015.748128418869	7315.013037816305	6533.713251744852	6962.8845705355	6622.891274049404	5595.886932031131	1.1007851147761252	1.1589888161879187	1.1199621567262057	1.1307531394164474	1.2537330031206282	1.3072124449021318	1.1675920780932074	1.2442861435744184	1.1835284298079094	1.0	12.450151097013583	-7.736958576625039	23.04693688994183	1.209407324890206	1.1293154779012302	0.12253935275098227	0.07797489507558167	154.24552077028204	145209.01702632662	0.021848395939558334	0.0281854425986187	1.8324891984053925e-08	7.736958576625039	-0.08009184698897576	
STPLASPS(ph)PSPGRS(ph)PQR	ddPTM_K562_Methotrexat_30min_R1	1	STPLASPSPSPGRSPQR	17	1	Q8WYP5;Q8WYP5-3;Q8WYP5-2	Q8WYP5	AHCTF1	Protein ELYS	2	STPLAS(0.061)PS(0.937)PS(0.035)PGRS(0.966)PQR	126.43	0.0023228999999999997	6014100.0	2155.2	1837.5	2584.9	2485.4	2006.3	1863.8	2127.2	2194.8	2086.8	2428.5	True	False	2060.4599885636144	2141.115642840336	2042.3648147485703	2267.5088408324377	2270.1636162841755	2223.952972054357	2604.278749271407	2117.607639975517	1989.7851234827237	1988.675117353861	1.0360968317968753	1.0766543132944275	1.0269977217124078	1.140210797151017	1.1415457439347179	1.11830884423875	1.3095546510063798	1.0648333765010416	1.0005581636332535	1.0	10.957591892223478	-7.264134961072482	24.893827309921015	1.123303223539859	1.0495900904889928	0.09623296021077654	0.08393265659716743	474.9911884861325	4386572.407352917	0.02401759261612549	0.03759211723890071	5.4433346983893467e-08	7.264134961072482	-0.07371313305086624	
STPLASPS(ph)PSPGRSPQR	ddPTM_K562_Methotrexat_30min_R1	2	STPLASPSPSPGRSPQR	17	1	Q8WYP5;Q8WYP5-3;Q8WYP5-2	Q8WYP5	AHCTF1	Protein ELYS	1	STPLASPS(0.965)PS(0.035)PGRSPQR;STPLASPS(0.751)PS(0.069)PGRS(0.18)PQR	119.74	0.00071611	32330000.0	5019.700000000001	5601.2	6916.1	6342.2	5143.4	5424.0	4775.9	5671.799999999999	5711.5	7154.5	True	False	4799.03999841907	6526.703095878795	5464.5051240986495	5786.189172900737	5819.847253150587	6472.111235337932	5847.017148667408	5472.319579193158	5445.973611640587	5858.750721477537	0.819123432035829	1.1140093521904963	0.932708248546294	0.9876148428178045	0.9933597672650016	1.1046913485518137	0.997997256861072	0.9340420576578271	0.9295452000844217	1.0	12.516377352027492	-3.013405225217125	24.955702203426775	0.9862138164422775	0.0049428759768404	0.0	0.08213758411150149	0.0	0.0	0.017982049896205603	0.0	0.0009696048401718051	3.013405225217125	-0.9812709404654371	
STPLASPSPSPGRS(ph)PQR	ddPTM_K562_Methotrexat_30min_R1	2	STPLASPSPSPGRSPQR	17	1	Q8WYP5;Q8WYP5-3;Q8WYP5-2	Q8WYP5	AHCTF1	Protein ELYS	1	STPLASPSPS(0.001)PGRS(0.999)PQR;STPLASPSPS(0.001)PGRS(0.999)PQR	210.57	4.686600000000001e-22	371240000.0	5790.4	4943.0	7021.2	6765.799999999999	5372.5	4949.7	5124.799999999999	6207.0	5773.3	6170.3	True	False	5535.860949229191	5759.746733365869	5547.546070375127	6172.652818582165	6079.07791879915	5906.1594730000315	6274.166855145787	5988.696291838912	5504.900543129578	5052.7988785705265	1.0956028692745685	1.139912130244009	1.0979154729278613	1.221630420470734	1.203111001425603	1.1688886921758752	1.2417210749779128	1.1852235633675483	1.0894754917866343	1.0	12.302867040777949	-10.002384156313896	3.4281765122785743	1.0005453467544805	1.1708648748029444	0.5777970081646626	0.045752088555041766	0.159509462412991	4.759862203159608	0.04758003512390339	0.012619369533101117	9.945253182041859e-11	10.002384156313896	0.17031952804846395	
STPQPPS(ph)GKT(ph)TPNSGDVQVTEDAVRR	ddPTM_K562_Methotrexat_30min_R1	1	STPQPPSGKTTPNSGDVQVTEDAVRR	26	2	P35269;M0QXD6	P35269	GTF2F1	General transcription factor IIF subunit 1	2	S(0.005)T(0.005)PQPPS(0.912)GKT(0.755)T(0.266)PNS(0.057)GDVQVTEDAVRR	74.444	0.0015144	28021000.0	1135.0	976.01	1670.0	1499.2	867.15	1096.7	955.94	1315.5	937.36	1344.4	True	False	1085.106759010627	1137.2790631665835	1319.4898219003119	1367.7674636581603	981.1954243437293	1308.6217536495408	1170.3338790797814	1269.2331193675027	893.7823381961691	1100.916132497645	0.9856398021426469	1.0330297009877054	1.1985380020790406	1.2423902450726292	0.8912535618110112	1.188666161772627	1.063054527527586	1.1528881100942698	0.8118532482292251	1.0	10.104488853620396	-9.75453667012273	24.99999361862788	0.9059266059668651	1.0961104249297635	0.3202671028939572	0.10982763239982461	165.81119489381368	600545.6426801216	0.07648583507149777	0.027484152843266926	1.7598000669124497e-10	9.75453667012273	0.19018381896289838	
STPQPPS(ph)GKTTPNSGDVQVTEDAVRR	ddPTM_K562_Methotrexat_30min_R1	1	STPQPPSGKTTPNSGDVQVTEDAVRR	26	2	P35269;M0QXD6	P35269	GTF2F1	General transcription factor IIF subunit 1	1	STPQPPS(0.654)GKT(0.149)T(0.149)PNS(0.047)GDVQVTEDAVRR	64.749	0.0063479	18791000.0	1127.3	862.36	1958.0	1706.3	915.34	901.49	587.47	857.65	1290.5	1631.7	True	False	1077.7452417909074	1004.8503323862818	1547.042557653179	1556.7113282016537	1035.7232540146322	1075.6901839131258	719.2251019342209	827.4859633793518	1230.5049366755097	1336.1833185037246	0.806584865164894	0.7520302929028677	1.1578071184016705	1.1650432292066624	0.7751355967940451	0.8050468592271437	0.5382682839803886	0.6192907454539855	0.9209102670533599	1.0	10.383902237498864	-7.964466300676399	22.230794340637715	0.7437938279448586	0.9684016347168791	0.21701859968694026	0.17494259477296425	77.73969959574157	48634.628338069786	0.05735726643317781	0.06503634203460455	1.0852597577044782e-08	7.964466300676399	0.22460780677202052	
STPQPPSGKTT(ph)PNSGDVQVTEDAVRR	ddPTM_K562_Methotrexat_30min_R1	1	STPQPPSGKTTPNSGDVQVTEDAVRR	26	2	P35269;M0QXD6	P35269	GTF2F1	General transcription factor IIF subunit 1	1	STPQPPS(0.037)GKT(0.166)T(0.783)PNS(0.012)GDVQVT(0.001)EDAVRR	80.109	0.00057835	20770000.0	1889.7	1091.3	2355.6	1977.4	1149.9	1428.8	1396.7	1417.0	1311.4	2078.5	True	False	1806.631050662892	1271.6187760716518	1861.1917511786671	1804.0444121115574	1301.1320053656852	1704.8953785123233	1709.9455289147136	1367.1633068367535	1250.4333002373226	1702.063508923202	1.0614357461936563	0.7471041881839838	1.0934913658751408	1.0599160387692423	0.7644438639007288	1.0016637860892235	1.0046308612752635	0.8032387156350466	0.7346572520248671	1.0	10.733069153824127	-9.268239459475483	24.76829544239986	0.826710978259072	0.9563337233860868	0.1402733869198418	0.12830745160168425	864.1431406517366	3147489.4372538123	0.0664995369156113	0.033098897264119694	5.392132313986519e-10	9.268239459475483	0.12962274512701477	
STPQPPSGKTTPNS(ph)GDVQVTEDAVRR	ddPTM_K562_Methotrexat_30min_R1	1	STPQPPSGKTTPNSGDVQVTEDAVRR	26	2	P35269;M0QXD6	P35269	GTF2F1	General transcription factor IIF subunit 1	1	S(0.004)T(0.003)PQPPS(0.15)GKT(0.27)T(0.15)PNS(0.419)GDVQVT(0.005)EDAVRR	47.648	0.019809999999999998	33206000.0	1154.3	1013.8	2087.0	1457.1	1048.9	1007.8	1213.1	1055.8	967.15	1529.2	True	False	1103.5583541197936	1181.313218346413	1648.9672205424836	1329.3583052936929	1186.8487350448447	1202.5430868314095	1485.1685552562744	1018.6669155668632	922.1874075983876	1252.2470617490308	0.8812624823239261	0.9433547535711175	1.3168066198049995	1.0615782986441666	0.9477752204801796	0.9603081720565596	1.1860028269357	0.813471196445913	0.7364260901601604	1.0	10.290303511147041	-9.2852103431269	24.79316178407261	0.8312114264160767	1.0431187790804395	0.2925781888172102	0.13621619749927766	894.6444541217191	933109.6660532177	0.07633472099190296	0.03670060727523908	5.185488278162892e-10	9.2852103431269	0.21190735266436278	
STPS(ph)PVLQPR	ddPTM_K562_Methotrexat_30min_R1	1	STPSPVLQPR	10	0	Q8TEK3;Q8TEK3-1	Q8TEK3	DOT1L	Histone-lysine N-methyltransferase, H3 lysine-79 specific	1	S(0.273)T(0.05)PS(0.677)PVLQPR	93.839	0.011467	30312000.0	2090.5	1591.4	2616.3	2457.9	2143.0	1912.6	1981.0	2283.2	2051.7	2613.5	True	False	1998.6041230940216	1854.3518008250942	2067.1743838549596	2242.4197231359335	2424.8420623520865	2282.1828813988423	2425.289677654503	2202.8985618699207	1956.316914821498	2140.1698246672086	0.9338530522477579	0.8664507738835359	0.965892687593799	1.0477765349694268	1.133013854509954	1.0663559756309136	1.133223003941582	1.0293101680435413	0.9140942425565226	1.0	11.063509565159649	-7.089559583975166	3.0763999262827446	1.0556302178965553	0.9011952081227684	0.471071232853459	0.06210872639337631	0.21458883475635232	3.901212879571671	0.01824833301078965	0.03672450890540143	8.136552219244504e-08	7.089559583975166	-0.15443500977378688	
STPSHGSVSSLNSTGS(ph)LSPK	ddPTM_K562_Methotrexat_30min_R1	2	STPSHGSVSSLNSTGSLSPK	20	0	M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2	M0R165	EPS15L1	Epidermal growth factor receptor substrate 15-like 1	1	STPSHGSVSSLNSTGS(0.995)LS(0.005)PK;STPSHGSVSSLNS(0.002)T(0.008)GS(0.641)LS(0.349)PK	237.05	1.4301e-57	48847000.0	5262.1	3964.3	8029.8	6157.1	4088.7	4535.9	3266.3	4888.5	5597.1	6254.4	True	False	5030.784384660636	4619.333193421468	6344.454713709654	5617.316602514449	4626.435716443759	5412.398479419124	3998.8509208091396	4716.568684171823	5336.89204267067	5121.667553624865	0.9822551604506414	0.9019197644236263	1.2387478584429714	1.0967749358387755	0.9033065242919553	1.0567648959543448	0.7807712778973616	0.9209048878687309	1.0420223465877787	1.0	12.322397895601684	-7.761276763693513	24.9999993762521	0.9434875393532127	1.0571257753837453	0.17857661791993984	0.10889847075782935	7.630761625295836	1172951.357071536	0.03432369590418019	0.04154618172536849	1.7326994450785642e-08	7.761276763693513	0.11363823603053258	
STPSHGSVSSLNSTGSLS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	STPSHGSVSSLNSTGSLSPK	20	0	M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2	M0R165	EPS15L1	Epidermal growth factor receptor substrate 15-like 1	1	STPSHGSVSSLNS(0.001)T(0.005)GS(0.006)LS(0.988)PK;STPSHGSVSSLNSTGSLS(1)PK	298.42	1.0577999999999994e-201	42629000.0	5342.4	3818.0	7227.3	5207.9	3651.8	3354.5	3399.3	4830.6	4707.0	5724.799999999999	True	False	5107.554492809137	4448.859605096274	5710.388496898271	4751.331492786373	4132.075708491528	4002.7096495097903	4161.679556411386	4660.705059989857	4488.17259738987	4687.983245553791	1.0894993060509077	0.9489922152165736	1.21809063680297	1.0135128996658986	0.8814186169309584	0.8538233692080849	0.8877334534756358	0.9941812536148021	0.9573781223827055	1.0	12.194751698364302	-7.549680441043285	6.770671211803615	0.924518841845444	1.0790841355399925	0.468648706705987	0.07498770699389623	0.15149310604608807	24.42433139716188	0.022485435345452887	0.029574381328403447	2.8204574935223374e-08	7.549680441043285	0.15456529369454852	
STQIENQHQGAQDT(ph)SDLMSPSKR	ddPTM_K562_Methotrexat_30min_R1	1	STQIENQHQGAQDTSDLMSPSKR	23	1	H0YBW3;Q9NVR2	H0YBW3	INTS10	Integrator complex subunit 10	1	STQIENQHQGAQDT(0.429)S(0.046)DLMS(0.105)PS(0.419)KR	50.956	0.024176	27274000.0	1779.9	1332.7	2268.0	2084.5	1440.9	1374.1	1270.9	1870.5	1879.0	2707.1	True	False	1701.6577271920842	1552.9060229732338	1791.9777940538347	1901.7551213950335	1630.4036059930568	1639.625377669221	1555.9316765931894	1804.713454790508	1791.6457001265264	2216.8179576646635	0.767612749305188	0.7005112971067609	0.80835586334821	0.857876089833945	0.7354702267526863	0.7396301405806485	0.701876160472963	0.8141008821002639	0.8082060567634338	1.0	11.11427458740785	-10.33559685251665	1.3982658249694409	0.9995828174365947	0.7622417619488108	0.6944464000455493	0.04678304100977474	0.7456801750185201	2.2795497311830313	0.047718185223544124	0.014074390494448778	4.617460058992733e-11	10.33559685251665	-0.23734105548778395	
STQIENQHQGAQDTSDLMS(ph)PSKR	ddPTM_K562_Methotrexat_30min_R1	1	STQIENQHQGAQDTSDLMSPSKR	23	1	H0YBW3;Q9NVR2	H0YBW3	INTS10	Integrator complex subunit 10	1	STQIENQHQGAQDT(0.242)S(0.189)DLMS(0.431)PS(0.138)KR	44.312	0.02384	25273000.0	1405.3	1023.1	1897.4	1550.6	1224.2	1123.0	1006.0	1432.8	1410.1	1862.6	True	False	1343.5246946587088	1192.149885273441	1499.1616695051798	1414.6613054618088	1385.2037576908176	1340.003856431508	1231.621108389919	1382.4076118812284	1344.544758780423	1525.2650910369769	0.8808466820317058	0.7816017637058342	0.982885977208034	0.9274855326951905	0.9081724651214982	0.8785383369132799	0.8074800345378527	0.9063392455546042	0.8815154602838986	1.0	10.574844289493672	-11.00747600096136	1.8456182607061435	1.0000239821502066	0.8838865403972159	0.29393904289165473	0.05398461446756585	83.88198150043964	149.40601269080477	0.059645589133108544	0.0150425404593268	9.829331882188193e-12	11.00747600096136	-0.11613744175299068	
STRPHS(ph)LDR	ddPTM_K562_Methotrexat_30min_R1	1	STRPHSLDR	9	1	Q3KP66-3;Q3KP66	Q3KP66-3	C1orf106	Uncharacterized protein C1orf106	1	S(0.001)T(0.003)RPHS(0.996)LDR	107.11	0.013253000000000001	45322000.0	490.06	288.67	510.21	487.42	422.79	274.37	334.12	259.8	198.32	320.79	True	False	468.5175491812757	336.3678109489633	403.1238934321904	444.68864536837026	478.3942956331492	327.3881194025938	409.05491524377743	250.6626867439582	189.10014648701062	262.69182248134433	1.7835254434482768	1.2804654814591774	1.5345886660054642	1.692814953917916	1.8211236692269837	1.246282112287085	1.5571665359808733	0.9542081834761323	0.7198554743760248	1.0	8.037227480275815	-9.302353937060301	3.7671511860308806	0.8508036336438364	1.55465251939643	0.7258214758401504	0.18846195873429986	0.12261401650054092	3.7033610918445112	0.11141599613924866	0.05145903709988414	4.984780770986952e-10	9.302353937060301	0.7038488857525936	
STRS(ph)VENLPECGITHEQR	ddPTM_K562_Methotrexat_30min_R1	1	STRSVENLPECGITHEQR	18	1	Q9UBF8-2;F8W860;A0A0B4J1S8;Q9UBF8-3;Q9UBF8	Q9UBF8-2	PI4KB	Phosphatidylinositol 4-kinase beta	1	S(0.193)T(0.193)RS(0.615)VENLPECGITHEQR	89.20100000000001	0.0032580999999999995	78909000.0	1608.9	1524.3	1706.6	2300.5	1425.6	1278.0	1298.2	1482.1	1459.8	2063.3	True	False	1538.1746824424638	1776.1646663300803	1348.407982068904	2098.8187367566675	1613.0913878157403	1524.9554127510844	1589.3543965325985	1429.9737029377225	1391.934216628369	1689.616376214215	0.9103691844470198	1.0512236335621858	0.7980557013126087	1.2421865497417341	0.9547086608085925	0.9025453553947713	0.9406599148226383	0.8463303996506872	0.8238167173469056	1.0	10.72248000752539	-8.130382633608805	4.735254609761023	0.8961023181386318	1.0009269115605548	0.13434366996176328	0.11460146725659752	0.44179065684014374	15.113699901319592	0.03762592934961208	0.03781041503677746	7.406574001830335e-09	8.130382633608805	0.10482459342192296	
STS(ph)FRQGPEESGLGDGTGPK	ddPTM_K562_Methotrexat_30min_R1	1	STSFRQGPEESGLGDGTGPK	20	1	A0A0D9SFK2;Q92614-3;Q92614-4;Q92614;Q92614-5;Q92614-2	A0A0D9SFK2	MYO18A	Unconventional myosin-XVIIIa	1	S(0.023)T(0.023)S(0.954)FRQGPEES(0.001)GLGDGTGPK	176.48	7.1543e-12	27300000.0	3628.6	2262.3	4573.0	3422.0	1869.1	2164.2	2157.8	2762.0	2915.7	4156.5	True	False	3469.091088762961	2636.1066224749343	3613.1897937425897	3121.998572997748	2114.9194114523007	2582.4010205601694	2641.7415782144826	2664.8588944834955	2780.1497434054904	3403.7175726915025	1.019206504263444	0.7744786593414162	1.061542186323481	0.9172319695517557	0.6213557283426193	0.7587001463573625	0.7761341891023924	0.7829259736072193	0.8167980110074399	1.0	11.732895617402328	-7.552026482951573	24.955553597166688	0.7783676559309665	0.9432446189552075	0.3026853411424266	0.11131468128261193	225.44558726928562	193019.4321804079	0.031316003578892485	0.040429385969275214	2.805262569929775e-08	7.552026482951573	0.16487696302424104	
STS(ph)HDRVPQSVQIR	ddPTM_K562_Methotrexat_30min_R1	1	STSHDRVPQSVQIR	14	1	A0A087WW76;A0A452Q6Z5;Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3	A0A087WW76	ARHGAP21	Rho GTPase-activating protein 21	1	S(0.161)T(0.161)S(0.677)HDRVPQSVQIR	90.853	0.010246	48601000.0	642.4	733.66	844.29	819.26	765.0	648.47	499.4	747.77	692.85	907.4	True	False	614.1608651880412	854.8848449122405	667.0850669055171	747.436747783207	865.6109088657705	773.7776498487443	611.4031625545986	721.4705052599288	660.6395547273364	743.0610671142238	0.8265281177672468	1.1504906968579303	0.8977526833645456	1.0058887228286322	1.1649256665101366	1.0413378981808488	0.8228168445550026	0.9709437584475462	0.8890784135589526	1.0	9.537336970663137	-11.450732401913488	4.993996662892252	0.9999999641373101	0.9812777871651994	0.0012596466843585175	0.11454857388900087	175851615.41847578	484802713.41169935	1.4136623986464891	0.028605065742248317	3.5421552990579035e-12	11.450732401913488	-0.01872217697211065	
STS(ph)LSALVR	ddPTM_K562_Methotrexat_30min_R1	2	STSLSALVR	9	0	Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;A0A0A0MRX3;X6R5W5	Q5VZ89-5	DENND4C	DENN domain-containing protein 4C	1	S(0.013)T(0.048)S(0.917)LS(0.022)ALVR;S(0.041)T(0.177)S(0.782)LSALVR	120.63	0.0041229	11364300.0	4426.5	3913.9	5275.4	4325.5	3938.2	3521.2	3400.1000000000004	4296.0	4030.6	4892.9	True	False	4231.916360141443	4560.605450074989	4168.165632606527	3946.290130771994	4456.142328490427	4201.622065241875	4162.658976775909	4144.907245004019	3843.2182857530483	4006.7483968296083	1.0561971806090948	1.138231053810024	1.04028634188876	0.9849108903105939	1.1121592591180438	1.0486363627340471	1.0389119965879732	1.0344815382677213	0.9591863289429515	1.0	11.968216203454306	-9.417246494096267	1.6697073374844686	0.9814425914374207	1.063400838241956	0.36763449032872175	0.04083849241359169	0.44158447667432105	2.1877910184163496	0.03566023191769288	0.012396142294793713	3.8260752373688597e-10	9.417246494096267	0.08195824680453523	
STS(ph)PIIGSPPVR	ddPTM_K562_Methotrexat_30min_R1	1	STSPIIGSPPVR	12	0	Q86TB9-2;Q86TB9-4;Q86TB9	Q86TB9-2	PATL1	Protein PAT1 homolog 1	1	S(0.031)T(0.06)S(0.909)PIIGSPPVR	210.95	4.0853e-17	85441000.0	5722.2	5403.9	7771.3	6187.0	5838.5	5749.6	5148.3	6140.7	6091.3	6842.8	True	False	5470.658939568821	6296.802624405381	6140.210331098137	5644.595315937192	6606.365086814119	6860.6288271937665	6302.937328353702	5924.728100418109	5808.116792538965	5603.50261191229	0.9762927437454813	1.1237261870850614	1.0957807564941398	1.0073333960686561	1.178970644676756	1.2243465029549545	1.1248209851735427	1.0573258389891593	1.036515407379608	1.0	12.452113187045	-9.612430794193095	2.436950372232719	1.012296056565578	1.108005667839171	0.2032891478551191	0.06889625493371584	0.5023783962750693	5.533802754152638	0.06402998350618228	0.019878193509612892	2.4410080171937717e-10	9.612430794193095	0.0957096112735929	
STS(ph)PPPS(ph)PEVWADSR	ddPTM_K562_Methotrexat_30min_R1	1	STSPPPSPEVWADSR	15	0	Q08495-3;Q08495-2;Q08495;E5RFK4;E5RJ61;E5RGQ7;E5RJC0;E5RGQ0	Q08495-3	DMTN	Dematin	2	S(0.055)T(0.081)S(0.864)PPPS(1)PEVWADSR	140.77	1.0607e-05	33349000.0	4303.9	3566.8	5086.6	4208.2	3998.3	3704.1	3447.7	4406.2	4098.5	4626.2	True	False	4114.705709344349	4156.153074766209	4018.9921725018708	3839.273639651993	4524.146531918968	4419.864901698971	4220.934488465135	4251.2314485420675	3907.9616295734827	3788.3503512054485	1.0861470898632843	1.0970878322918909	1.0608818614738291	1.0134420747094683	1.1942260119841848	1.1666990885076338	1.1141879966624624	1.1221853985044785	1.0315734468249416	1.0	11.887354043814119	-9.890249934005832	4.176181362701207	1.001330511921712	1.1069419040958561	0.37277843372230923	0.047936356202222176	0.23635079488986913	6.846750905923388	0.050318760282631554	0.013271668697337662	1.2875083846876227e-10	9.890249934005832	0.10561139217414417	
STS(ph)PPPSPEVWADSR	ddPTM_K562_Methotrexat_30min_R1	5	STSPPPSPEVWADSR	15	0	Q08495-3;Q08495-2;Q08495;E5RFK4;E5RJ61;E5RGQ7;E5RJC0;E5RGQ0	Q08495-3	DMTN	Dematin	1	S(0.116)T(0.116)S(0.767)PPPSPEVWADSR;S(0.012)T(0.012)S(0.976)PPPSPEVWADSR;S(0.001)T(0.009)S(0.99)PPPSPEVWADSR;S(0.316)T(0.081)S(0.602)PPPSPEVWADSR;S(0.001)T(0.014)S(0.985)PPPS(0.001)PEVWADSR	195.94	9.5899e-10	467137900.0	8184.49	7278.140000000001	9644.61	8519.880000000001	7946.38	7488.509999999999	7757.91	8657.05	8086.72	9463.25	True	False	7824.709619431619	8480.728927772501	7620.338162393985	7772.955348367051	8991.468253585328	8935.558574288432	9497.818800188112	8352.576644637353	7710.770152276314	7749.363724232614	1.0097228492403054	1.094377452080727	0.9833501734555109	1.003044330473309	1.1602847115652342	1.153069967066655	1.2256256304615047	1.0778403159111585	0.9950197753867693	1.0	12.919862144780797	-7.751997522861832	24.999280093302673	1.1146028576542815	1.0249437061352533	0.21389550562820303	0.07206965802803462	292.393868513569	774169.6379027121	0.02228510267745145	0.028387105850491978	1.770119054731604e-08	7.751997522861832	-0.08965915151902815	
STS(ph)PVTDPSIPIR	ddPTM_K562_Methotrexat_30min_R1	4	STSPVTDPSIPIR	13	0	A0A087WU18;Q99607	A0A087WU18	ELF4	ETS-related transcription factor Elf-4	1	S(0.085)T(0.085)S(0.755)PVT(0.075)DPSIPIR;S(0.023)T(0.082)S(0.597)PVT(0.298)DPSIPIR;S(0.104)T(0.104)S(0.73)PVT(0.061)DPSIPIR;S(0.261)T(0.106)S(0.556)PVT(0.077)DPSIPIR	164.53	7.039600000000001e-05	421372000.0	11566.8	9990.0	13836.1	12452.400000000001	9671.7	9718.5	10227.4	11732.7	11389.3	11892.2	True	False	11058.337321695253	11640.677699033993	10932.09169149395	11360.717425598232	10943.698074871989	11596.462581237409	12521.154795176	11320.054290842327	10859.81392892552	9738.407342225888	1.1355385878906634	1.1953369057135073	1.122574904429416	1.1665888503490691	1.12376671978178	1.1907966234843108	1.2857497489229142	1.1624133077447267	1.1151529759735141	1.0	13.249470132190302	-10.089552727853908	2.5975890712266128	1.000469806556582	1.1742844378472634	0.5818033477532824	0.044775572096715635	0.2901425205256362	4.3392280323168215	0.045732773692392856	0.01236712161917553	8.136680670402189e-11	10.089552727853908	0.17381463129068142	
STS(ph)SHGTDEMESSSYR	ddPTM_K562_Methotrexat_30min_R1	1	STSSHGTDEMESSSYR	16	0	Q5JRC6;A0A0D9SGE8;Q8IWS0-2;Q8IWS0-4;Q8IWS0-3;Q8IWS0-5;Q8IWS0	Q5JRC6;Q8IWS0-5	PHF6	PHD finger protein 6	1	S(0.001)T(0.001)S(0.494)S(0.494)HGT(0.01)DEMESSSYR	118.52	0.00044183	2049500.0	1039.0	1016.4	1254.3	1120.3	1133.7	890.15	669.64	929.91	951.79	1365.7	True	False	993.3268040634724	1184.342824153969	991.0395710236887	1022.0850383779593	1282.8014214132331	1062.1588894056158	819.8238161254727	897.2045382219948	907.5414906457837	1118.3584960964247	0.8882007044526695	1.0590010522456434	0.8861555346365799	0.9139153875483549	1.1470395458082434	0.949748129167015	0.7330599436468962	0.8022512828879497	0.811494251452922	1.0	10.127167010979024	-8.616554867932392	7.200735587857142	0.8211748517270652	0.9816850226471597	0.3185053306289801	0.09799924551238051	0.2414028204110306	15.937871687330023	0.036912860696875674	0.028490675918044744	2.4179378410007185e-09	8.616554867932392	0.16051017092009456	
STS(ph)TPNVHMVSTTLPVDSR	ddPTM_K562_Methotrexat_30min_R1	2	STSTPNVHMVSTTLPVDSR	19	0	H7C155;P04049;P04049-2	H7C155	RAF1	RAF proto-oncogene serine/threonine-protein kinase	1	S(0.005)T(0.005)S(0.422)T(0.422)PNVHMVS(0.117)T(0.004)T(0.024)LPVDSR;S(0.109)T(0.109)S(0.638)T(0.144)PNVHMVSTTLPVDSR	137.87	5.2421e-09	199366000.0	4393.1	3615.1	4730.9	4382.7	3396.9	3424.6000000000004	3258.8999999999996	4479.5	4020.5	4961.8	True	False	4199.984584149413	4212.433828806584	3737.948741573761	3998.47549558072	3843.651890622396	4086.3554824001244	3989.7912824372834	4321.953445995233	3833.5878325485396	4063.1699391749576	1.033671898301708	1.03673582248985	0.9199587508103995	0.9840778395777917	0.9459736974237569	1.005706269629932	0.9819405395698084	1.0636900525191477	0.9434967992815394	1.0	11.988389990180597														
STS(ph)YGYSR	ddPTM_K562_Methotrexat_30min_R1	1	STSYGYSR	8	0	Q13242	Q13242	SRSF9	Serine/arginine-rich splicing factor 9	1	S(0.005)T(0.184)S(0.812)YGYSR	104.42	0.014085	27525000.0	1956.1	1468.4	2602.1	2223.3	1719.2	1558.7	1495.8	2048.9	1843.3	2081.2	True	False	1870.1121861680072	1711.0281414676192	2055.9547698004776	2028.3867408959352	1945.3049340157272	1859.8967150666003	1831.2712265702214	1976.8390256724235	1757.6053853343424	1704.2745127596686	1.0973069022429982	1.003962758732462	1.2063518842814507	1.190176069471017	1.1414269939798414	1.0913128730975026	1.074516583367143	1.1599299355075148	1.0312924192525281	1.0	10.734942018289086	-9.902987078336485	5.273844776401441	1.0011497664235922	1.1198294785465719	0.36451637325254005	0.056043455753366375	0.22052091217342001	8.852894021637566	0.05736039712657189	0.01495261070449691	1.2502962300153422e-10	9.902987078336485	0.11867971212297967	
STSAPQMS(ph)PGSSDNQSS(ph)SPQPAQQK	ddPTM_K562_Methotrexat_30min_R1	1	STSAPQMSPGSSDNQSSSPQPAQQK	25	0	F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5	F8W726	UBAP2L	Ubiquitin-associated protein 2-like	2	STSAPQMS(0.915)PGS(0.084)S(0.001)DNQS(0.008)S(0.883)S(0.108)PQPAQQK	165.53	1.0622999999999999e-25	8627200.0	4726.4	3321.3	6756.5	4758.7	3980.0	3500.8	3405.6	4224.2	4224.0	6299.5	True	False	4518.633115231567	3870.0883725527115	5338.402983035599	4341.512159358384	4503.439761157863	4177.280053958522	4169.392491782017	4075.632491700645	4027.627161966182	5158.59950659693	0.875941834494622	0.750220746464919	1.0348550951103557	0.841606748848474	0.872996586650847	0.8097701805725614	0.8082411682570253	0.7900656925370223	0.7807598083192083	1.0	12.332763730324102	-8.24818567797963	19.61108598632503	0.822801102141149	0.8751970706492813	0.029897488538112915	0.08767200168595354	126.7391537649306	187528.71564970733	0.028110374477692476	0.027816751892508842	5.646954936514624e-09	8.24818567797963	0.05239596850813233	
STSAPQMS(ph)PGSSDNQSSS(ph)PQPAQQK	ddPTM_K562_Methotrexat_30min_R1	3	STSAPQMSPGSSDNQSSSPQPAQQK	25	0	F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5	F8W726	UBAP2L	Ubiquitin-associated protein 2-like	2	STSAPQMS(0.996)PGS(0.004)S(0.001)DNQS(0.004)S(0.29)S(0.705)PQPAQQK;STSAPQMS(0.988)PGS(0.009)S(0.003)DNQS(0.004)S(0.243)S(0.754)PQPAQQK;STSAPQMS(0.996)PGS(0.003)S(0.001)DNQS(0.005)S(0.267)S(0.728)PQPAQQK	179.61	1.4317e-25	168798000.0	21194.800000000003	16231.599999999999	28668.6	21642.6	15403.7	13985.5	14131.599999999999	18286.1	19222.9	23321.8	True	False	20263.10196993694	18913.596009973997	22651.45263959954	19745.226860304236	17429.55654496166	16687.999941338257	17300.971029148095	17642.96749833986	18329.231574753718	19097.996027137422	1.0610067119683109	0.9903445357878701	1.1860643707021832	1.033889986794799	0.9126379815031387	0.8738089544905829	0.9059050491247441	0.9238125022787717	0.959746328814221	1.0	14.221133642240325	-7.667451111661731	4.494918060166532	0.9215976556530665	1.0756736157276572	0.6078470424424278	0.05498075708107142	0.1390365223493244	4.963867344876396	0.016607190731455695	0.021501654343274144	2.1505467518142914e-08	7.667451111661731	0.15407596007459068	
STSAPQMS(ph)PGSSDNQSSSPQPAQQK	ddPTM_K562_Methotrexat_30min_R1	1	STSAPQMSPGSSDNQSSSPQPAQQK	25	0	F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5	F8W726	UBAP2L	Ubiquitin-associated protein 2-like	1	S(0.005)T(0.001)S(0.005)APQMS(0.804)PGS(0.077)S(0.104)DNQS(0.002)S(0.002)SPQPAQQK	88.295	0.00022367	0.0	2838.5	1873.8	3382.0	3061.2	2220.6	1777.7	1725.9	2461.6	2429.4	3041.3	True	False	2713.7229387239327	2183.413600845835	2672.164417764583	2792.829348819609	2512.6478225193846	2121.215365608451	2112.9770089166627	2375.024132751839	2316.457724261514	2490.491099200451	1.0896336628527394	0.8767000217534604	1.0729467849222414	1.1213970408150509	1.008896527807727	0.8517257364579409	0.8484178118906003	0.9536368684531007	0.9301208605022484	1.0	11.28221453961464	-8.113040538267656	6.113462662231599	0.9102204839270631	1.0347720443876833	0.38836541346322917	0.07390146500831511	0.25776629511760774	12.209585800284081	0.0252710899992003	0.025361577723343867	7.70831514126062e-09	8.113040538267656	0.12455156046062021	
STSAPQMSPGS(ph)SDNQSSSPQPAQQK	ddPTM_K562_Methotrexat_30min_R1	2	STSAPQMSPGSSDNQSSSPQPAQQK	25	0	F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5	F8W726	UBAP2L	Ubiquitin-associated protein 2-like	1	STSAPQMS(0.049)PGS(0.724)S(0.226)DNQSSSPQPAQQK;STSAPQMS(0.046)PGS(0.922)S(0.032)DNQSSSPQPAQQK	140.42	7.9203e-16	66895000.0	15044.2	12103.2	22098.0	17031.9	10941.5	11124.7	10792.6	14161.400000000001	13873.400000000001	17934.2	True	False	14382.874981416442	14103.048080775601	17459.93178703777	15538.73977073066	12380.499031836369	13274.390829602491	13213.115282712775	13663.335535242077	13228.428662126335	14686.142594048828	0.9793500838841591	0.9602962786491321	1.1888711875991826	1.0580545348257293	0.8430055034909738	0.9038718468511662	0.8996995091186872	0.9303556361204598	0.9007422185514395	1.0	13.842167892446964	-7.746423646811138	24.995313422400923	0.9083475587996905	1.0506345992004034	0.4830111170376411	0.06761189961189687	205.75563036378975	342501.0938138323	0.02064807375896237	0.026550107466939848	1.7929837486183392e-08	7.746423646811138	0.14228704040071283	
STSAPQMSPGSS(ph)DNQSS(ph)SPQPAQQK	ddPTM_K562_Methotrexat_30min_R1	1	STSAPQMSPGSSDNQSSSPQPAQQK	25	0	F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5	F8W726	UBAP2L	Ubiquitin-associated protein 2-like	2	STS(0.002)APQMS(0.327)PGS(0.305)S(0.365)DNQS(0.051)S(0.52)S(0.43)PQPAQQK	107.17	1.2657e-07	10562000.0	4335.7	2906.9	5342.0	4718.2	3164.2	3140.5	2849.2	3735.5	3702.6	4849.1	True	False	4145.107819420596	3387.215816148341	4220.78720274938	4304.562731478077	3580.347761873294	3747.3571782040517	3488.2056282550298	3604.120347698442	3530.4669341609797	3970.881001260287	1.0438761116500375	0.853013680106077	1.0629346992291577	1.084032165686125	0.9016507321012529	0.9437092617519153	0.8784462760651692	0.907637460441287	0.88908907948651	1.0	11.955243411713324	-7.796248920733871	24.998735950031882	0.9145695221950618	1.003394265596199	0.30313032608372403	0.06679613504785954	234.7697173734008	168600.28189306892	0.020971383620343106	0.023780199598615846	1.5986414867498648e-08	7.796248920733871	0.08882474340113711	
STSAPQMSPGSS(ph)DNQSSSPQPAQQK	ddPTM_K562_Methotrexat_30min_R1	1	STSAPQMSPGSSDNQSSSPQPAQQK	25	0	F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5	F8W726	UBAP2L	Ubiquitin-associated protein 2-like	1	STSAPQMS(0.029)PGS(0.161)S(0.79)DNQS(0.007)S(0.01)S(0.002)PQPAQQK	89.51100000000001	7.6462e-05	23275000.0	5695.1	4135.0	9248.6	7147.2	4497.1	4800.2	4629.2	5101.7	5507.1	8050.0	True	False	5444.750223120192	4818.238467017574	7307.44524959714	6520.616072743861	5088.54747485001	5727.770713840183	5667.415939322677	4922.270319328914	5251.076123026502	6592.066993905113	0.8259549285761648	0.7309146693248744	1.108521083956436	0.9891610747846898	0.7719198666449801	0.868888425911927	0.8597327582627196	0.7466960399340514	0.7965750542100887	1.0	12.686515189089096	-7.76822686605559	24.998769255802692	0.8303376912986173	0.9145065028285095	0.08704458033967644	0.11289213538542525	386.8531048557383	1424803.126657496	0.03636453430348361	0.04216325060814156	1.705191401155061e-08	7.76822686605559	0.0841688115298922	
STSAPQMSPGSSDNQSSS(ph)PQPAQQK	ddPTM_K562_Methotrexat_30min_R1	3	STSAPQMSPGSSDNQSSSPQPAQQK	25	0	F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5	F8W726	UBAP2L	Ubiquitin-associated protein 2-like	1	STSAPQMSPGSSDNQS(0.001)S(0.223)S(0.776)PQPAQQK;STSAPQMSPGSSDNQS(0.003)S(0.245)S(0.752)PQPAQQK;STSAPQMSPGSSDNQSS(0.215)S(0.785)PQPAQQK	177.8	2.0766e-26	94866100.0	25802.9	19528.5	37318.0	28458.7	19531.8	18051.899999999998	18586.300000000003	23238.8	24820.2	30917.7	True	False	24668.63541152008	22755.252697255797	29485.46178064419	25963.769955982167	22100.57405200582	21540.17419048614	22754.75090145881	22421.47823212277	23666.314319468023	25318.204931361528	0.9743437766775942	0.8987703811919535	1.1645952728710518	1.0254980566896739	0.8729123613589981	0.8507780961913473	0.8987505616274012	0.8855872007082698	0.9347548289315205	1.0	14.627887500412577	-7.756232672887067	24.9984320294737	0.8981732459662696	1.0180706027748894	0.3468816516622223	0.07240116442025751	140.2993700934556	673600.9581908099	0.022202350887129393	0.027800410444882906	1.7529411135647188e-08	7.756232672887067	0.11989735680861979	
STSSHGTDEMESS(ph)SYRDRSPHR	ddPTM_K562_Methotrexat_30min_R1	1	STSSHGTDEMESSSYRDRSPHR	22	2	Q5JRC6;A0A0D9SGE8;Q8IWS0-2;Q8IWS0-4;Q8IWS0-3;Q8IWS0-5;Q8IWS0	Q5JRC6;Q8IWS0-5	PHF6	PHD finger protein 6	1	S(0.001)T(0.001)S(0.001)S(0.001)HGT(0.002)DEMES(0.04)S(0.255)S(0.255)Y(0.233)RDRS(0.212)PHR	42.711000000000006	0.028183	76365000.0	1029.7	1055.8	1118.9	1094.7	959.31	839.49	749.95	953.18	895.12	948.56	True	False	984.4356209279664	1230.2530044684772	884.0581806732083	998.729350631395	1085.4760797176752	1001.7095613852955	918.1453779692051	919.6561191324333	853.5060665765076	776.7665922656691	1.2673506182295626	1.5838129712557296	1.1381259048417511	1.2857521945148362	1.3974288937318529	1.289588882116459	1.182009354046964	1.1839542641116745	1.0987934793732634	1.0	9.601337343403765	-9.420101269848342	0.5958105691718121	0.9961826134995909	1.3540813840374026	0.5196643728826476	0.10795799014650882	0.6119301851161728	0.47555904218092937	0.10568816072010698	0.056294048201083455	3.801007531636787e-10	9.420101269848342	0.3578987705378117	
STSSHGTDEMESSS(ph)YRDRSPHR	ddPTM_K562_Methotrexat_30min_R1	1	STSSHGTDEMESSSYRDRSPHR	22	2	Q5JRC6;A0A0D9SGE8;Q8IWS0-2;Q8IWS0-4;Q8IWS0-3;Q8IWS0-5;Q8IWS0	Q5JRC6;Q8IWS0-5	PHF6	PHD finger protein 6	1	STSSHGT(0.004)DEMES(0.044)S(0.142)S(0.424)Y(0.163)RDRS(0.223)PHR	40.952	0.03115	1508900.0	202.33	142.42	189.97	242.55	209.09	238.61	166.64	159.38	256.82	406.73	True	False	193.4358154631014	165.952484273916	150.0978930936539	221.28601808316878	236.58899991469784	284.71800550589654	204.01326193051312	153.77451506255602	244.88049425571842	333.06725570571786	0.5807710369283853	0.4982551764876689	0.4506534056481168	0.6643883909101123	0.7103340117100447	0.8548363750216852	0.61252872636261	0.4616920829900606	0.7352283662254779	1.0	8.379669717449499	-7.383914875337444	4.926409463677554	0.7013138486494402	0.5097327242955068	0.32635276526518087	0.13722152776028532	0.302046582668345	10.847819861707709	0.0397462407670064	0.059762367697791884	4.131284700355036e-08	7.383914875337444	-0.19158112435393349	
STSSHGTDEMESSSYRDRS(ph)PHR	ddPTM_K562_Methotrexat_30min_R1	1	STSSHGTDEMESSSYRDRSPHR	22	2	Q5JRC6;A0A0D9SGE8;Q8IWS0-2;Q8IWS0-4;Q8IWS0-3;Q8IWS0-5;Q8IWS0	Q5JRC6;Q8IWS0-5	PHF6	PHD finger protein 6	1	STSSHGTDEMES(0.016)S(0.01)S(0.039)Y(0.134)RDRS(0.8)PHR	63.46	0.0046155	3447800.0	756.51	897.03	1250.9	1156.5	995.4	944.79	915.94	814.04	846.3	1363.1	True	False	723.2547262194973	1045.2489605970434	988.3531845599398	1055.1114405820856	1126.3125473006369	1127.3572960978847	1121.3628608535425	785.4097517977352	806.9556977206389	1116.2293812909388	0.6479445339299711	0.9364105425967149	0.8854391410275297	0.9452460742090759	1.0090332383098863	1.0099692007695373	1.0045989468192162	0.7036275562728829	0.7229299920302944	1.0	10.124417811153897	-12.132973984728713	4.158597878441705	1.000027456845445	0.8849977169879021	0.07329017164630625	0.12920362566355476	111373850.52782732	1.7110499327689463	30411.393978362856	0.033175052503917654	7.362511993698889e-13	12.132973984728713	-0.11502973985754295	
STSSVDSDILSSSHSS(ph)DTLCNADNAQIPLANGLDSHSITSSR	ddPTM_K562_Methotrexat_30min_R1	1	STSSVDSDILSSSHSSDTLCNADNAQIPLANGLDSHSITSSR	42	0	Q96K76-2;Q96K76-4;Q96K76	Q96K76-2	USP47	Ubiquitin carboxyl-terminal hydrolase 47	1	S(0.001)T(0.001)S(0.001)S(0.001)VDS(0.026)DILS(0.074)S(0.074)S(0.074)HS(0.236)S(0.255)DT(0.255)LCNADNAQIPLANGLDS(0.001)HS(0.001)ITSSR	49.191	0.0005545	30661000.0	541.65	409.31	372.68	480.53	404.39	433.74	504.1	601.62	521.81	587.84	True	False	517.8397145533976	476.9415204195797	294.4595609735377	438.40268097095503	457.57437311925304	517.5541163745341	617.1572571961817	580.4606835985378	497.5511669946901	481.3764797139358	1.0757478530341378	0.9907869215027049	0.6117032580165198	0.9107272570348296	0.9505540723368382	1.0751545581996391	1.2820677436565564	1.205835158260088	1.033600908981607	1.0	8.91102184253638	-8.251786324141724	2.6344449686664255	1.1496199695391909	0.887998413474359	0.3834033830068878	0.1346090368444105	0.28553118167244185	3.9369011430798295	0.05295364130786576	0.0493859033497491	5.600330738287256e-09	8.251786324141724	-0.26162155606483184	
STST(ph)PNVHMVSTTLPVDSR	ddPTM_K562_Methotrexat_30min_R1	1	STSTPNVHMVSTTLPVDSR	19	0	H7C155;P04049;P04049-2	H7C155	RAF1	RAF proto-oncogene serine/threonine-protein kinase	1	S(0.026)T(0.026)S(0.141)T(0.808)PNVHMVSTTLPVDSR	123.55	0.00011428	148680000.0	1465.1	1392.8	1764.6	1364.9	1301.2	1381.6	1160.6	1634.7	2001.6	1984.8	True	False	1400.695958261206	1622.9365264479025	1394.234574685801	1245.241336143958	1472.33060734136	1648.5746465233944	1420.8940938343349	1577.206674443219	1908.5460528862461	1625.3334868947663	0.8617898846945342	0.9985252500694837	0.857814464494616	0.7661451303283104	0.9058637007192158	1.0142993175345392	0.8742169562684534	0.9703895767609547	1.1742488961650346	1.0	10.666520046204823	-9.557387000153241	5.809878219342546	1.085986836445971	0.9004774043709443	0.4872377563801591	0.07741450988296485	0.15810115106856448	14.626468443798922	0.0544692942051388	0.02038150585112134	2.770849897697881e-10	9.557387000153241	-0.1855094320750268	
STSTPTS(ph)PGPR	ddPTM_K562_Methotrexat_30min_R1	1	STSTPTSPGPR	11	0	Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;H3BRB0;A0A0C4DGL7	Q8WWM7-6	ATXN2L	Ataxin-2-like protein	1	S(0.002)T(0.002)S(0.005)T(0.035)PT(0.114)S(0.841)PGPR	87.713	0.019797	11461000.0	5639.4	5129.1	6491.5	6243.8	5530.9	4809.2	4463.3	5853.7	5711.3	6530.3	True	False	5391.498728426898	5976.596595206731	5129.022861596332	5696.4157481248785	6258.31029522312	5738.509836465191	5464.308641229355	5647.822053091256	5445.78290959693	5347.599390099199	1.0082091673525464	1.1176223496232884	0.9591262335567714	1.0652285881159114	1.1703027543181441	1.0731001740874124	1.0218246062609397	1.0561415770126505	1.0183602982077364	1.0	12.384675676128275	-9.736916081661048	1.2048265076665223	1.0009098564772723	1.0642616327733534	0.12219957679934312	0.054741570856061204	0.9918501259916069	2.913816510578788	0.05310813722877023	0.01731500997769568	1.832668513077043e-10	9.736916081661048	0.06335177629608113	
STT(ph)PPPAEPVSLPQEPPKPR	ddPTM_K562_Methotrexat_30min_R1	2	STTPPPAEPVSLPQEPPKPR	20	1	Q9UN86-2	Q9UN86-2	G3BP2	Ras GTPase-activating protein-binding protein 2	1	S(0.225)T(0.225)T(0.549)PPPAEPVSLPQEPPKPR;S(0.145)T(0.145)T(0.71)PPPAEPVSLPQEPPKPR	137.27	1.2484e-08	93695000.0	7351.4	5005.2	10765.599999999999	7433.299999999999	5399.4	5028.8	4857.4	6385.7	6867.3	8762.8	True	False	7028.241258317818	5832.224226146639	8506.047680628735	6781.634129942768	6109.51574030044	6000.544428515373	5946.795598303378	6161.111311550782	6548.040721915328	7175.772006731892	0.9794404353600324	0.8127660996858854	1.1853843283550336	0.9450738016175309	0.8514088427794037	0.8362228374711475	0.8287325172433628	0.8585990895154955	0.9125207316749105	1.0	12.80891833740775	-7.602205993771181	5.601770098906443	0.8703072007339832	0.9885039956816768	0.210121254373404	0.09586929338249725	0.29483006506130965	15.595478772198529	0.02831717289385621	0.0368552475714685	2.4991596836347362e-08	7.602205993771181	0.11819679494769364	
STT(ph)PTSSPFR	ddPTM_K562_Methotrexat_30min_R1	3	STTPTSSPFR	10	0	E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;H7C5N8;A0A2R8Y7F4;A0A2R8YET2;A0A2R8Y424	E7EPN9	PRRC2C	Protein PRRC2C	1	S(0.113)T(0.113)T(0.692)PT(0.027)S(0.044)S(0.012)PFR;S(0.013)T(0.002)T(0.976)PT(0.003)S(0.005)S(0.002)PFR;S(0.079)T(0.079)T(0.813)PT(0.008)S(0.021)SPFR	113.44	0.006645100000000001	237640000.0	10137.900000000001	10060.4	12828.2	11891.6	10199.7	9978.7	9984.5	12747.6	11638.7	14900.2	True	False	9692.250054778708	11722.710102438601	10135.736127725491	10849.081890900068	11541.139329618563	11906.942548684843	12223.778286997174	12299.259682591543	11097.619377361692	12201.629394109934	0.7943406361331894	0.9607495625213367	0.8306870992671105	0.8891502553041991	0.945868699732004	0.9758485661294266	1.0018152405856493	1.008001414018421	0.9095194599762899	1.0	13.574786196340781	-7.849925636579633	2.351285439864144	0.9805813737661838	0.8698191042197368	0.5534785550770607	0.04714177700175133	0.22623453531720625	2.556031440965496	0.015333244836193513	0.018440436433872814	1.4127794314555402e-08	7.849925636579633	-0.11076226954644697	
STTSQVTPAEEKDGHS(ph)PMSK	ddPTM_K562_Methotrexat_30min_R1	1	STTSQVTPAEEKDGHSPMSK	20	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	STTSQVT(0.012)PAEEKDGHS(0.879)PMS(0.109)K	49.066	0.030202	73679000.0	6968.3	3953.2	11863.0	7641.4	4556.9	4377.7	3716.3	5824.1	5895.0	9276.7	True	False	6661.981875606832	4606.399107089209	9373.118417487054	6971.490326038859	5156.212223020165	5223.628568388431	4549.774875854335	5619.263101868695	5620.94273669286	7596.599736939074	0.8769689211361777	0.6063764403289835	1.2338570863368667	0.9177119457985169	0.678752652709563	0.687627194965679	0.5989225486938177	0.7397076713867888	0.7399287748912946	1.0	12.891138092644564	-7.755595842467209	24.921661877547304	0.7180536918176219	0.9103555210628718	0.17934322273959724	0.17185140397465112	214.98376736421392	916862.2802775356	0.05137428402169154	0.06453505822629302	1.7555134351991093e-08	7.755595842467209	0.19230182924524986	
STTTGHLIY(ph)K	ddPTM_K562_Methotrexat_30min_R1	2	STTTGHLIYK	10	0	A0A087WVQ9;Q5VTE0;P68104;A6PW80;Q5JR01;A0A087WV01;A0A2U3TZH3;Q05639;A0A2R8YDN5;A0A2R8Y660;A0A2R8Y488	A0A087WVQ9	EEF1A1;EEF1A1P5;EEF1A2	Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2	1	STTTGHLIY(1)K;STTTGHLIY(1)K	120.12	0.0025340999999999996	14407400.0	1951.26	1941.22	3437.1000000000004	2409.8999999999996	1908.4	1989.22	1241.9499999999998	2140.8599999999997	2044.3200000000002	2446.3	True	False	1865.484946772754	2261.9736099017778	2715.6996807506334	2198.6278086111256	2159.3880502999154	2373.6086120130763	1520.488902151948	2065.564740349001	1949.280009410678	2003.2513648683341	0.9312285914231063	1.12915116373848	1.3556459905016092	1.0975296696007157	1.0779416343699053	1.1848780705406305	0.7590105409721679	1.0311061190689679	0.9730581212102639	1.0	10.96812774430303	-8.73108320692382	24.999896473498776	0.9433856177161364	1.1358815863778047	0.37268334665143055	0.11967787404857767	220.0705510041229	181239.4965688107	0.046563081554656105	0.03606313110706852	1.8574485505318345e-09	8.73108320692382	0.1924959686616683	
STTTGHLIYK	ddPTM_K562_Methotrexat_30min_R1	2	STTTGHLIYK	10	0	A0A087WVQ9;Q5VTE0;P68104;A6PW80;Q5JR01;A0A087WV01;A0A2U3TZH3;Q05639;A0A2R8YDN5;A0A2R8Y660;A0A2R8Y488	A0A087WVQ9	EEF1A1;EEF1A1P5;EEF1A2	Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2	0	;	105.2	0.0058763	77170000.0	19713.8	15777.1	27108.0	21727.0	14513.8	14229.099999999999	14144.2	18143.4	18730.699999999997	22671.0	False	True	18847.204956637623	18383.99761015308	21418.4012527387	19822.22764334369	16422.61909685753	16978.67219372179	17316.39689988937	17505.28633822299	17859.913845321953	18565.062213518373	1.015197511318535	0.9902470241530649	1.1536940197885592	1.0677167367050295	0.8845981181199167	0.9145497062411441	0.9327411188140391	0.9429155764140832	0.9620174519165922	1.0	14.18030252937631	-7.74928644452861	24.981748359207096	0.9350336162429057	1.0588933854410987	0.5812747922508885	0.048647862296515146	160.51886146813553	329963.46313440613	0.015020546044808514	0.019243036255224867	1.7812035641394307e-08	7.74928644452861	0.12385976919819297	
STTYS(ph)SLHASENR	ddPTM_K562_Methotrexat_30min_R1	1	STTYSSLHASENR	13	0	Q8IZT6-2;Q8IZT6	Q8IZT6-2	ASPM	Abnormal spindle-like microcephaly-associated protein	1	ST(0.005)T(0.006)YS(0.806)S(0.181)LHAS(0.001)ENR	74.89	0.032441000000000005	20969000.0	3220.2	4029.9	3443.4	3381.1	4304.7	4410.4	4269.8	4937.6	4484.3	4861.2	True	False	3078.643863758609	4695.772478412123	2720.677396845228	3084.6842124964	4870.843502476443	5262.647380592631	5227.411340559918	4763.941809341678	4275.825871781472	3980.789574008887	0.7733751826169086	1.1796083141574365	0.6834516987807892	0.7748925571541686	1.2235872838591717	1.3220109434955232	1.3131594231180652	1.1967328894865727	1.074115019718429	1.0	11.958838896719985	-7.7692422283548215	24.99764772292836	1.2110360541578102	0.8640745122349751	0.5315939538705905	0.15321760227626127	135.98659963421863	435653.34938598546	0.04789011890760737	0.05529030850566814	1.7012093918158774e-08	7.7692422283548215	-0.3469615419228351	
STVTGERQS(ph)GDGQESTEPVENK	ddPTM_K562_Methotrexat_30min_R1	2	STVTGERQSGDGQESTEPVENK	22	1	O15234;J3KSY7	O15234	CASC3	Protein CASC3	1	S(0.001)T(0.001)VT(0.059)GERQS(0.937)GDGQES(0.001)TEPVENK;S(0.002)T(0.002)VT(0.022)GERQS(0.972)GDGQESTEPVENK	76.704	0.0021515	139020000.0	6325.1	5008.8	9208.0	6604.0	4735.299999999999	4676.700000000001	4384.6	6260.6	5774.2	7774.2	True	False	6047.056177460895	5836.419064957101	7275.366634765306	6025.037573371458	5358.074950002722	5580.406086708131	5367.958162869229	6040.411149458137	5505.758702326023	6366.217046461756	0.9498664800977458	0.9167797802622661	1.142808449926922	0.9464078163530538	0.8416418904505709	0.8765654777368349	0.8431943371853238	0.9488226847080722	0.8648399296071814	1.0	12.636220628961727	-7.522838548036781	24.99986723823876	0.8900829484213725	1.002863345225298	0.31232829846672505	0.0712044977655	1.5876213518422688	987644.6559275348	0.02066868795845822	0.02696746675307278	3.0002776855721284e-08	7.522838548036781	0.11278039680392549	
STVTGERQS(ph)GDGQESTEPVENKVGK	ddPTM_K562_Methotrexat_30min_R1	2	STVTGERQSGDGQESTEPVENKVGK	25	2	O15234;J3KSY7	O15234	CASC3	Protein CASC3	1	S(0.001)T(0.001)VT(0.01)GERQS(0.987)GDGQES(0.001)TEPVENKVGK;STVT(0.002)GERQS(0.951)GDGQES(0.042)T(0.005)EPVENKVGK	110.16	3.1237e-07	40186000.0	4653.7	3455.35	7525.6	6063.6	3642.31	3097.73	3511.0600000000004	3859.7	4269.0	5973.1	True	False	4449.128920183045	4026.2878565923047	5946.079403408972	5532.01360234633	4121.337607151481	3696.32248101832	4298.504581335499	3723.952163301214	4070.535121788262	4891.3137094775975	0.909597949434779	0.8231506085554918	1.2156405735922478	1.1309872829516716	0.8425829648108276	0.7556911497735636	0.8788036990975556	0.7613398740067604	0.8321966987930127	1.0	12.256006281047814	-7.845621084569326	8.657726890541184	0.8294961722462201	1.019488264382857	0.33423133934581895	0.11967664914314269	0.31786705309991664	29.276214135113907	0.03914424937063703	0.04446430699082032	1.4268519576406606e-08	7.845621084569326	0.18999209213663681	
SVAAEGALLPQTPPS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	SVAAEGALLPQTPPSPR	17	0	H7C2H2;Q86X27-3;Q86X27	H7C2H2	RALGPS2	Ras-specific guanine nucleotide-releasing factor RalGPS2	1	SVAAEGALLPQT(0.044)PPS(0.956)PR	129.36	4.7008e-05	15199000.0	1497.1	1242.9	1850.8	2080.4	1311.2	1473.2	1517.5	1782.1	1958.2	1948.3	True	False	1431.2892765769236	1448.2680993122467	1462.3423726784997	1898.0145620293724	1483.645782620651	1757.8750501290278	1857.838003957956	1719.422532896104	1867.1637094133928	1595.4439905869992	0.8971103247882244	0.9077523923477857	0.9165739325894302	1.189646627037688	0.9299265855611671	1.1018093148367225	1.1644645721937354	1.0777078625389351	1.1703097823737592	1.0	10.639742247136587	-7.188307341230086	8.488628241585632	1.0905456932941116	0.9062200943260345	0.5573880008172705	0.074905286630388	0.2685341227600022	29.022808805987424	0.0199318903332183	0.034622404612804025	6.4817557074675e-08	7.188307341230086	-0.1843255989680771	
SVAEQHTPVCSRFS(ph)PPEPGDTPTDEPDALYVACQGQPK	ddPTM_K562_Methotrexat_30min_R1	2	SVAEQHTPVCSRFSPPEPGDTPTDEPDALYVACQGQPK	38	1	O14686;O14686-3	O14686	KMT2D	Histone-lysine N-methyltransferase 2D	1	S(0.029)VAEQHT(0.036)PVCS(0.206)RFS(0.548)PPEPGDT(0.061)PT(0.11)DEPDALY(0.01)VACQGQPK;S(0.014)VAEQHT(0.016)PVCS(0.209)RFS(0.613)PPEPGDT(0.068)PT(0.068)DEPDALY(0.013)VACQGQPK	47.534	0.0035260999999999995	54974000.0	1686.56	1596.6799999999998	2544.8	2079.1	1047.6399999999999	1325.97	1267.5700000000002	1741.06	1660.5	2198.6	True	False	1612.4208418299227	1860.504231080439	2010.681256749649	1896.8285310109939	1185.4230229596544	1582.1949363423744	1551.8548393258545	1679.8259329577986	1583.3037174348578	1800.4122351304088	0.8955842502998379	1.0333767982562492	1.116789376075313	1.0535523442905292	0.6584175556181948	0.8787959254385824	0.8619441753646211	0.9330229489559785	0.8794117738930911	1.0	10.814111558709468														
SVAVS(ph)DEEEVEEEAER	ddPTM_K562_Methotrexat_30min_R1	3	SVAVSDEEEVEEEAER	16	0	Q9Y6X9-2;Q9Y6X9	Q9Y6X9-2	MORC2	MORC family CW-type zinc finger protein 2	1	S(0.267)VAVS(0.733)DEEEVEEEAER;S(0.007)VAVS(0.993)DEEEVEEEAER;SVAVS(1)DEEEVEEEAER	228.9	2.6632999999999995e-187	0.0	3100.05	2498.9399999999996	3512.99	3512.2799999999997	2459.14	2399.51	2875.6000000000004	3014.8599999999997	2981.06	3732.5299999999997	True	False	2963.77551389506	2911.847360282681	2775.6614068488466	3204.3638655664895	2782.5600136315934	2863.1813477702294	3520.5265002843466	2908.825664961085	2842.471171271521	3056.532648044804	0.9696528240229731	0.9526635883131578	0.9081078877480258	1.048365659570576	0.9103648918690711	0.9367416211312982	1.1518039902293697	0.9516749859752999	0.9299659118935919	1.0	11.57768026184853														
SVAVS(ph)DEEEVEEEAERRK	ddPTM_K562_Methotrexat_30min_R1	1	SVAVSDEEEVEEEAERRK	18	2	Q9Y6X9-2;Q9Y6X9	Q9Y6X9-2	MORC2	MORC family CW-type zinc finger protein 2	1	S(0.002)VAVS(0.998)DEEEVEEEAERRK	64.249	0.027372000000000004	0.0	552.25	379.94	843.4	818.01	422.16	511.62	469.93	499.72	607.7	554.08	True	False	527.9737512454791	442.7186271242218	666.3818657429474	746.296333342457	477.6814395905539	610.483324156267	575.3237648764164	482.14456435600744	579.4481596417727	453.7307428550247	1.1636278994967206	0.975729844397338	1.4686725028810064	1.644800016517533	1.052786144894709	1.3454748962234804	1.267984975530395	1.0626226499932394	1.2770749365486946	1.0	8.82569260362226	-10.187165241342516	0.6791771910473993	1.0050781102551254	1.2791060614003014	0.13908105099897894	0.19178283022847167	2.074787618748297	2.072161011411572	0.20830698948910145	0.08026910232659641	6.49882374587013e-11	10.187165241342516	0.274027951145176	
SVDALDDLT(ph)PPSTAES(ph)GSRSPTSNGGR	ddPTM_K562_Methotrexat_30min_R1	1	SVDALDDLTPPSTAESGSRSPTSNGGR	27	1	S4R3V8;Q86X29-6;Q86X29-5;Q86X29-4;Q86X29;Q86X29-2;Q86X29-3	S4R3V8	LSR	Lipolysis-stimulated lipoprotein receptor	2	S(0.001)VDALDDLT(0.861)PPS(0.113)T(0.113)AES(0.305)GS(0.314)RS(0.269)PT(0.019)S(0.008)NGGR	60.472	0.004795300000000001	20279000.0	995.7	998.3	1142.9	1242.2	1166.4	993.71	916.75	1212.8	1167.4	1416.2	True	False	951.9302202175159	1163.2521068013652	903.0209086526139	1133.298254639919	1319.8020445765153	1185.7303937440365	1122.3545239726236	1170.1451365784158	1113.1278288066571	1159.7124567414194	0.8208329700038458	1.0030521790460816	0.7786593162842608	0.9772234902298803	1.1380424836385035	1.022434817226783	0.9677869004927612	1.00899591944223	0.9598308807808648	1.0	10.179551427379538	-7.507875872196743	24.675969949744697	1.0184434810656173	0.8805473453277874	0.4682218006272967	0.07050192056234131	528.2680616265411	868869.1725268683	0.019814567214574082	0.028267162067523274	3.105447044115418e-08	7.507875872196743	-0.13789613573782988	
SVDALDDLT(ph)PPSTAESGSRS(ph)PTSNGGR	ddPTM_K562_Methotrexat_30min_R1	3	SVDALDDLTPPSTAESGSRSPTSNGGR	27	1	S4R3V8;Q86X29-6;Q86X29-5;Q86X29-4;Q86X29;Q86X29-2;Q86X29-3	S4R3V8	LSR	Lipolysis-stimulated lipoprotein receptor	2	SVDALDDLT(0.967)PPS(0.078)T(0.128)AES(0.066)GS(0.19)RS(0.396)PT(0.131)S(0.044)NGGR;S(0.005)VDALDDLT(0.973)PPS(0.028)T(0.015)AES(0.018)GS(0.062)RS(0.405)PT(0.359)S(0.136)NGGR;S(0.003)VDALDDLT(0.956)PPS(0.035)T(0.027)AES(0.051)GS(0.15)RS(0.421)PT(0.261)S(0.097)NGGR	84.12700000000001	0.00053067	59279000.0	4554.9	4231.200000000001	5806.500000000001	5875.7	4341.7	3864.52	4105.2	5426.2	5728.7	6010.799999999999	True	False	4354.672049883261	4930.3338818971615	4587.79500051746	5360.58650361276	4912.709651009823	4611.283796310497	5025.895600558945	5235.357470400562	5462.373987394805	4922.185874157126	0.8847028863226247	1.0016553636836054	0.9320645578633442	1.089066248342502	0.9980747937218186	0.9368365832182499	1.0210698516986783	1.0636244961588461	1.1097455738260151	1.0	12.26508342329145	-4.139434156097872	0.4523930928214363	1.0370293116138196	3.9340628227595247e-13	0.3816290349826894	0.05347164779967887	36.057727452913014	1.1947242400645446	0.03507030569444361	29.94466102131784	7.2538044554563e-05	4.139434156097872	-1.0370293116134262	
SVDALDDLTPPSTAES(ph)GSRSPTSNGGR	ddPTM_K562_Methotrexat_30min_R1	1	SVDALDDLTPPSTAESGSRSPTSNGGR	27	1	S4R3V8;Q86X29-6;Q86X29-5;Q86X29-4;Q86X29;Q86X29-2;Q86X29-3	S4R3V8	LSR	Lipolysis-stimulated lipoprotein receptor	1	SVDALDDLTPPS(0.003)T(0.003)AES(0.409)GS(0.409)RS(0.142)PT(0.027)S(0.009)NGGR	128.8	3.1549e-17	160390000.0	1235.5	1062.9	1063.6	1189.8	914.76	1190.3	964.68	1288.9	1068.8	1208.6	True	False	1181.1888993459288	1238.5261587891123	840.3648949539939	1085.4920812836701	1035.0669738484344	1420.30862894962	1181.0340465622137	1243.5686564445255	1019.111721285382	989.7108284265496	1.1934687036048626	1.2514020491804978	0.8491014454090726	1.096777008097804	1.0458276742247958	1.4350743552110452	1.1933122409500474	1.2564969693436225	1.0297065486345887	1.0	9.950863253012065														
SVDALDDLTPPSTAESGS(ph)RSPTSNGGR	ddPTM_K562_Methotrexat_30min_R1	1	SVDALDDLTPPSTAESGSRSPTSNGGR	27	1	S4R3V8;Q86X29-6;Q86X29-5;Q86X29-4;Q86X29;Q86X29-2;Q86X29-3	S4R3V8	LSR	Lipolysis-stimulated lipoprotein receptor	1	SVDALDDLTPPS(0.115)T(0.115)AES(0.115)GS(0.633)RS(0.022)PT(0.001)SNGGR	138.77	9.0268e-22	515100000.0	1521.9	1212.4	1350.1	1842.1	1252.7	1306.9	1064.0	1409.7	1720.9	1643.1	True	False	1454.999098271607	1412.7284927236046	1066.7324602081496	1680.6059530447553	1417.4520072367975	1559.4399287358308	1302.629084817966	1360.1200519744332	1640.8957346182763	1345.5186680354645	1.0813667122106825	1.0499508674868632	0.7928039094140856	1.2490394915876848	1.0534614204248536	1.1589879544463726	0.968124126229984	1.010851862769238	1.2195265466023444	1.0	10.393946692062086	-7.271628069855271	24.999549444143558	1.0904749705525745	0.982231523841962	0.18903576660348265	0.11298357312319883	1255.9098626872687	3081567.5679869736	0.031498599847884716	0.04732685469062182	5.3502235683238775e-08	7.271628069855271	-0.10824344671061248	
SVDALDDLTPPSTAESGSRS(ph)PTSNGGR	ddPTM_K562_Methotrexat_30min_R1	2	SVDALDDLTPPSTAESGSRSPTSNGGR	27	1	S4R3V8;Q86X29-6;Q86X29-5;Q86X29-4;Q86X29;Q86X29-2;Q86X29-3	S4R3V8	LSR	Lipolysis-stimulated lipoprotein receptor	1	SVDALDDLTPPS(0.005)T(0.005)AES(0.077)GS(0.077)RS(0.765)PT(0.06)S(0.011)NGGR;SVDALDDLTPPS(0.049)T(0.009)AES(0.007)GS(0.175)RS(0.625)PT(0.106)S(0.03)NGGR	130.19	2.5454e-17	696150000.0	1691.53	1619.71	2142.85	2402.2	1856.53	1678.77	1756.4	1934.51	2279.8999999999996	2330.5	True	False	1617.1723665808324	1887.3395471373715	1693.0950687778932	2191.6028556561055	2100.696236126232	2003.1685432426739	2150.317410314171	1866.472186809295	2173.9079466303715	1908.4238669932765	0.8473863665982594	0.9889519722423492	0.8871693013593285	1.1483836969137142	1.1007493002253639	1.0496455100400037	1.1267504287200085	0.9780176296736026	1.1391116953779064	1.0	10.8981659187387	-7.252446399679729	24.99409914555888	1.0784640693709178	0.9159474791950077	0.6050913659467321	0.06271377351740993	432.7959606367882	1202863.2688344638	0.016116453535552747	0.027392529407451783	5.591825372283526e-08	7.252446399679729	-0.16251659017591003	
SVET(ph)MESSTS(ph)PLAMPAAAT(ph)ST	ddPTM_K562_Methotrexat_30min_R1	1	SVETMESSTSPLAMPAAATST	21	0	F8W9W8	F8W9W8	SLCO2A1		3	S(0.247)VET(0.413)MES(0.151)S(0.177)T(0.116)S(0.896)PLAMPAAAT(0.41)S(0.345)T(0.245)	72.09	0.0060718000000000005	0.0	1255.3	1218.4	1862.4	1593.3	1245.6	1116.3	1262.7	1714.1	1326.5	1682.6	True	False	1200.118515053779	1419.7198907410432	1471.5076912018797	1453.617862757836	1409.4182327885005	1332.0091762551126	1545.8926178568106	1653.8141314388708	1264.8313045331768	1377.8648352726402	0.8709987252242414	1.030376749879186	1.0679622946547658	1.0549785621535268	1.0229002124940774	0.9667197697164148	1.1219479431383577	1.200273124839294	0.9179647176951886	1.0	10.428218655254287	-6.265262832619589	3.765970730630177	1.050905329179597	0.8530660294569995	0.32007745108858277	0.07470941961825346	0.29687172509433607	8.14496349440476	0.0188553387055626	0.16276876253238207	5.429216588604619e-07	6.265262832619589	-0.1978392997225974	
SVFWASS(ph)PYR	ddPTM_K562_Methotrexat_30min_R1	1	SVFWASSPYR	10	0	F1T0I1;O15027-2;O15027-4;O15027-3;O15027;O15027-5	F1T0I1	SEC16A	Protein transport protein Sec16A	1	SVFWAS(0.003)S(0.997)PYR	106.62	0.0037659	4793200.0	2274.6	1737.1	1665.8	2093.2	1691.2	1693.8	2111.5	2971.2	2787.6	3312.6	True	False	2174.6113075291382	2024.1262493485424	1316.1713445039145	1909.6924059026549	1913.6224432337128	2021.102878026436	2585.05762461761	2866.7012119078076	2658.0050844452953	2712.6560402496993	0.8016539049782979	0.7461787338000369	0.4851965472123628	0.7039935685052308	0.7054423468511564	0.7450641909766024	0.9529618153799021	1.0567875799115056	0.9798533411558609	1.0	11.405490412825488	-8.751049732252083	2.495771833218397	1.0159197710203098	0.6822495766668064	0.7813443645730319	0.07848598828529187	0.13488238293966515	1.7180413967408272	0.03858270675084079	0.025884835690079076	1.77398632521955e-09	8.751049732252083	-0.3336701943535034	
SVFWASS(ph)PYRR	ddPTM_K562_Methotrexat_30min_R1	1	SVFWASSPYRR	11	1	F1T0I1;O15027-2;O15027-4;O15027-3;O15027;O15027-5	F1T0I1	SEC16A	Protein transport protein Sec16A	1	SVFWAS(0.022)S(0.968)PY(0.011)RR	98.156	0.0072476	7629400.0	974.16	845.42	1147.0	854.58	921.51	1211.7	943.67	923.65	933.08	1341.0	True	False	931.3370928262486	985.111285317049	906.2603746824286	779.660298221045	1042.7047171619554	1445.8438760801937	1155.312019238882	891.1647059701958	889.7013144619799	1098.1319054443181	0.8481104029569361	0.8970791946150225	0.8252746051629782	0.7099878387611227	0.9495259285268319	1.3166395301985028	1.0520703510307607	0.8115279244250891	0.8101953053645186	1.0	10.10083564310423	-7.985468579888214	23.4856058457776	1.005614594658386	0.826451349950556	0.26752038257370436	0.13921459940663777	176.95713640661182	285993.51524920383	0.04816857270078802	0.05458813346775536	1.0340259074460211e-08	7.985468579888214	-0.17916324470783007	
SVGGSGGGS(ph)FGDNLVTR	ddPTM_K562_Methotrexat_30min_R1	2	SVGGSGGGSFGDNLVTR	17	0	P02545-3;P02545;P02545-5;P02545-4;A0A0C4DGC5	P02545-3	LMNA	Prelamin-A/C;Lamin-A/C	1	S(0.167)VGGS(0.006)GGGS(0.826)FGDNLVT(0.001)R;S(0.009)VGGSGGGS(0.991)FGDNLVTR	159.54	1.0463999999999999e-10	25393000.0	1155.33	1418.22	1634.1100000000001	1525.58	1367.64	1172.96	1031.6	1359.2	1466.13	1554.57	True	False	1104.5430765530807	1652.5567493817796	1291.132642434442	1391.8347700157515	1547.5086318969695	1399.6179193587732	1262.962560054713	1311.396165598106	1397.9699363100092	1273.0223089087056	0.8676541399340808	1.2981365195386314	1.0142262499242936	1.0933310125640276	1.2156178419399157	1.0994449268988784	0.992097743469542	1.030143899616572	1.0981503831683945	1.0	10.314041986438628	-12.067410584340097	5.0023774301338655	0.9999982284314467	1.0843943042667388	0.040104197460826385	0.1125888908184597	2.178207325290761e-06	4.0600236223671294e-07	0.10364533572657457	0.02513714277707002	8.562279799256626e-13	12.067410584340097	0.08439607583529207	
SVIDLRPEDVVHES(ph)GSLGDR	ddPTM_K562_Methotrexat_30min_R1	1	SVIDLRPEDVVHESGSLGDR	20	1	Q96C24-2;Q96C24	Q96C24-2	SYTL4	Synaptotagmin-like protein 4	1	SVIDLRPEDVVHES(0.566)GS(0.434)LGDR	54.656000000000006	0.034076999999999996	30595000.0	1138.0	1200.9	1053.3	1252.8	1265.5	1101.1	968.19	1341.4	1216.4	1349.9	True	False	1087.974882602725	1399.3283131901817	832.2267241961665	1142.9689690974799	1431.9354315942908	1313.8719913773216	1185.3312534115664	1294.222201687243	1159.8498295018144	1105.4200292015544	0.9842185358162635	1.2658792822859537	0.7528601818417244	1.0339680292594726	1.2953767742281446	1.1885726300131654	1.0722903711702527	1.1707967718135708	1.04923902124297	1.0	10.110378942880416	-7.545713272146513	24.84443110938757	1.140446907921807	1.0051317316597634	0.15297209338036566	0.1385631879844631	381.066714912554	414605.7383691354	0.04063297863513363	0.052460371696258945	2.8463396842020906e-08	7.545713272146513	-0.13531517626204348	
SVKTS(ph)PTTQSK	ddPTM_K562_Methotrexat_30min_R1	1	SVKTSPTTQSK	11	1	Q5UIP0-2;Q5UIP0;H7C2B5	Q5UIP0-2	RIF1	Telomere-associated protein RIF1	1	SVKT(0.019)S(0.908)PT(0.07)T(0.003)QSK	111.88	0.0051032	8859800.0	3552.1	2630.7	6892.6	4502.9	2875.5	2828.9	2341.5	3653.1	2841.4	4872.6	True	False	3395.953937164446	3065.378460745616	5445.937452952145	4108.137748203263	3253.6786515601607	3375.544888209343	2866.6409794184847	3524.6184024032077	2709.30393418814	3990.12492354063	0.8510896280788754	0.7682412253964114	1.3648538723243036	1.0295762230316123	0.8154327781479621	0.8459747383583317	0.718433892258886	0.8833353516349669	0.6790022834132331	1.0	11.96221819996967	-7.7648836237949395	23.96715270754769	0.8137140073994671	1.0124555927579346	0.2160673307982678	0.16672617217200478	79.74537741917014	554918.5752275665	0.05252584867926634	0.062028986539768245	1.7183687900773733e-08	7.7648836237949395	0.19874158535846753	
SVLPPDGNGS(ph)PVLPDKR	ddPTM_K562_Methotrexat_30min_R1	4	SVLPPDGNGSPVLPDKR	17	1	Q8N6S5	Q8N6S5	ARL6IP6	ADP-ribosylation factor-like protein 6-interacting protein 6	1	SVLPPDGNGS(1)PVLPDKR;SVLPPDGNGS(1)PVLPDKR;SVLPPDGNGS(1)PVLPDKR;SVLPPDGNGS(1)PVLPDKR	214.54	3.5077e-23	51245400.0	7109.5	5619.4	10142.9	7782.9	5571.1	5256.639999999999	4736.3	6474.3	6464.299999999999	9027.800000000001	True	False	6796.974892674937	6547.910336531692	8014.04390092974	7100.585240731783	6303.797299845869	6272.411283946676	5798.535840623433	6246.595199331824	6163.776103953121	7392.777938829396	0.9194074201762374	0.8857171675805153	1.0840368758862948	0.9604759265711315	0.8526966929083818	0.848451195997898	0.7843514154763855	0.8449591278161585	0.8337564248452347	1.0	12.851900863580308	-7.760227435143352	6.2788551101706265	0.8481467417402244	0.9661633676380108	0.3235720435476739	0.07064265518789074	0.1580419716062452	25.411776269910796	0.02139741810248192	0.02603359842290385	1.7368910002239214e-08	7.760227435143352	0.11801662589778639	
SVNEILGLAESS(ph)PNEPK	ddPTM_K562_Methotrexat_30min_R1	1	SVNEILGLAESSPNEPK	17	0	Q9H8G2-2;Q9H8G2	Q9H8G2-2	CAAP1	Caspase activity and apoptosis inhibitor 1	1	SVNEILGLAES(0.067)S(0.933)PNEPK	214.24	5.518500000000001e-23	9534000.0	5244.0	3524.8	7328.6	6080.7	4110.4	3164.8	3209.1	4344.8	5095.2	6325.9	True	False	5013.480038988308	4107.213288644147	5790.427011244684	5547.614471895792	4650.9896467998215	3776.3528092915717	3928.822364745618	4191.990921343914	4858.325264121707	5180.218210775698	0.9678125196655717	0.7928649183349987	1.1177959645019686	1.0709229314618156	0.897836627253463	0.7289949294869746	0.7584279667163494	0.8092305672807161	0.9378611221464761	1.0	12.338797155734792	-7.996469617557612	23.778606939558067	0.82766854189593	0.982975636990428	0.26099807617826565	0.10908459421152823	74.04415623912863	498703.0055078376	0.035054880988346665	0.039528543560402814	1.0081621360642502e-08	7.996469617557612	0.15530709509449803	
SVPGTTSS(ph)PLVGDISPK	ddPTM_K562_Methotrexat_30min_R1	1	SVPGTTSSPLVGDISPK	17	0	Q9UQR0;H0Y6S1;B4DRC2;Q9UQR0-2	Q9UQR0	SCML2	Sex comb on midleg-like protein 2	1	SVPGT(0.001)T(0.009)S(0.204)S(0.785)PLVGDISPK	200.63	6.2964e-16	10642000.0	2907.8	2322.4	4316.6	3349.1	2290.1	2175.2	2059.4	2639.9	2454.8	3419.0	True	False	2779.976593701409	2706.1371259496036	3410.604649829271	3055.489602813196	2591.288290710457	2595.526614879623	2521.272873377932	2547.0532206904372	2340.676883805534	2799.7859692126203	0.9929246821974815	0.966551427754546	1.2181662053219124	1.0913297074892074	0.9255308510025863	0.9270446539202992	0.9005234332562162	0.909731404006836	0.8360199349323117	1.0	11.45110082863315	-7.793306228961342	6.992159600043459	0.9110312037593779	1.070895417970278	0.5056475511950288	0.0729050793623642	0.15533915949960486	24.056844508367877	0.023651387105505777	0.02737911609375536	1.6095103398661843e-08	7.793306228961342	0.15986421421090025	
SVPGTTSSPLVGDIS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	SVPGTTSSPLVGDISPK	17	0	Q9UQR0;H0Y6S1;B4DRC2;Q9UQR0-2	Q9UQR0	SCML2	Sex comb on midleg-like protein 2	1	SVPGTTS(0.002)S(0.013)PLVGDIS(0.985)PK;SVPGTTSS(0.001)PLVGDIS(0.998)PK	155.2	5.6918000000000004e-11	23789000.0	4589.9	3175.9	6173.4	5781.5	3640.8	3354.9	3225.1000000000004	4466.3	4613.9	6245.5	True	False	4388.13349179108	3700.6634939301343	4877.687704502622	5274.644871357828	4119.629015684309	4003.186943848679	3948.410772036113	4309.217697477064	4399.400796069073	5114.379429867626	0.8579992063484145	0.7235801615184264	0.9537203430815594	1.0313362439544989	0.8054992931548953	0.7827317074815259	0.7720214790826164	0.8425690265199189	0.8602022701673	1.0	12.32034348108098	-10.264875478420286	3.718768816117904	0.9999977421496401	0.8460850385150915	0.22559519751453339	0.08497875773527779	5.96066316143247	81.99847813844885	0.08901991625842957	0.02344206517068273	5.434061153926247e-11	10.264875478420286	-0.15391270363454856	
SVPVNNLPERS(ph)PT(ph)DSPREGLR	ddPTM_K562_Methotrexat_30min_R1	1	SVPVNNLPERSPTDSPREGLR	21	2	P49454	P49454	CENPF	Centromere protein F	2	SVPVNNLPERS(0.667)PT(0.667)DS(0.667)PREGLR	69.975	0.0082268	0.0	1261.9	1162.7	1844.4	1211.5	1215.6	1111.7	1034.3	1510.0	1265.8	1559.7	True	False	1206.428386956396	1354.8164124791622	1457.2856452173262	1105.2896759750936	1375.4727069506273	1326.5202913578867	1266.268103784984	1456.8924441238532	1206.9532342842783	1277.2232161979894	0.9445712947088968	1.060751476560339	1.1409796085255504	0.8653848927560964	1.07692429131151	1.0385970710011394	0.9914227111799485	1.1406717523196137	0.9449822231364622	1.0	10.318794966914876														
SVPVNNLPERS(ph)PTDSPR	ddPTM_K562_Methotrexat_30min_R1	5	SVPVNNLPERSPTDSPR	17	1	P49454	P49454	CENPF	Centromere protein F	1	SVPVNNLPERS(0.783)PT(0.206)DS(0.011)PR;SVPVNNLPERS(0.805)PT(0.185)DS(0.01)PR;SVPVNNLPERS(0.878)PT(0.118)DS(0.005)PR;SVPVNNLPERS(0.936)PT(0.048)DS(0.016)PR;SVPVNNLPERS(0.758)PT(0.238)DS(0.004)PR	137.17	1.1823999999999999e-06	227166000.0	7037.55	6396.2	8805.1	7679.08	6865.499999999999	6077.72	6202.28	7061.51	6891.23	7415.950000000001	True	False	6728.187728524438	7453.063333189315	6957.029838811037	7005.866978940837	7768.433587997313	7252.153373384597	7593.2991731059965	6813.152690798032	6570.858221438495	6072.849592975233	1.1079127888013673	1.2272761278017892	1.1455956108082406	1.153637492857533	1.2792073093632101	1.194192818767243	1.2503683907945857	1.1219037432903238	1.082005757073143	1.0	12.568157922884183	-9.802534924159566	1.8684073814886404	1.0065094807782118	1.1946773112233968	0.6112628476362546	0.04988833853381966	0.20884779370354437	1.460781794542342	0.046657136444140726	0.013585466043132023	1.5756693088635557e-10	9.802534924159566	0.18816783044518504	
SVQEGENPDDGVRGS(ph)PPEDYR	ddPTM_K562_Methotrexat_30min_R1	1	SVQEGENPDDGVRGSPPEDYR	21	1	H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696	H7C5M1	RBM34	RNA-binding protein 34	1	SVQEGENPDDGVRGS(0.998)PPEDY(0.002)R	70.295	0.0059667999999999995	105390000.0	1435.0	1043.3	2049.7	1890.6	1111.7	1487.3	1123.4	1318.0	1647.0	1917.9	True	False	1371.9191182204831	1215.6875919321478	1619.4959808078247	1724.8540333458632	1257.9080357987928	1774.6996755748714	1375.3510468839315	1271.645192950488	1570.4313294882336	1570.5497251690215	0.8735279731896666	0.7740522776515824	1.0311650467695543	1.098248597738754	0.8009348673525237	1.1299863016969294	0.875713149888277	0.8096815863716983	0.9999246151338664	1.0	10.617053905537409	-6.7566841082863105	24.997098452873836	0.9625545368840518	0.8237901120283528	0.2221734517301891	0.1076719959526451	180.27420987418844	947618.1098979465	0.027613116988252327	0.06823387995993138	1.7511199333273904e-07	6.7566841082863105	-0.13876442485569895	
SVQEGENPDDGVRGS(ph)PPEDYRLGQVASSLFR	ddPTM_K562_Methotrexat_30min_R1	2	SVQEGENPDDGVRGSPPEDYRLGQVASSLFR	31	2	H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696	H7C5M1	RBM34	RNA-binding protein 34	1	S(0.013)VQEGENPDDGVRGS(0.973)PPEDY(0.011)RLGQVAS(0.001)S(0.001)LFR;SVQEGENPDDGVRGS(0.989)PPEDY(0.008)RLGQVAS(0.001)S(0.001)LFR	57.507	0.00084893	127070000.0	811.62	851.44	1141.26	1092.12	906.5799999999999	921.7	1002.78	1131.63	1091.02	1362.4	True	False	775.9421566063481	992.1259879945451	901.7251222406877	996.3755352256873	1025.8111604699736	1099.8054803855032	1227.6789414227073	1091.8299314860105	1040.2987183353084	1115.6561580740788	0.6955029567047181	0.8892757690749632	0.8082464437764648	0.8930847806601079	0.9194689179512067	0.9857925064332204	1.1004097745868313	0.9786437546948168	0.9324546015424166	1.0	10.123676745990936	-7.229656565204111	0.7116283236556117	1.007578419815697	0.7321370177283882	0.7077317935401325	0.05706691860494179	0.6378387801511668	0.5420105395107456	0.030584381482734842	0.11715939075127574	5.893094899226268e-08	7.229656565204111	-0.2754414020873087	
SVS(ph)CDNVSK	ddPTM_K562_Methotrexat_30min_R1	2	SVSCDNVSK	9	0	A0A087WXN4;Q96CB8	A0A087WXN4	INTS12	Integrator complex subunit 12	1	S(0.135)VS(0.861)CDNVS(0.004)K;S(0.017)VS(0.975)CDNVS(0.008)K	125.97	0.002559	106617000.0	7003.200000000001	4825.9	10604.099999999999	8257.2	5126.5	4212.2	4228.4	5048.5	5773.5	7039.4	True	False	6695.347713394912	5623.297948725536	8378.444323600648	7533.304096130043	5800.724606928587	5026.148035673017	5176.726336695759	4870.941393482957	5505.0912451732365	5764.49644681934	1.1614800659802964	0.9755054930822773	1.4534564121769211	1.3068451278665758	1.0062847050810892	0.8719144997385297	0.8980361744436682	0.8449899203547229	0.9549995035925063	1.0	12.492978872520762	-7.925870740478893	4.627171589772544	0.9061774206444458	1.221318903438625	0.6016819561761877	0.11923513554472345	0.15198004108154706	6.160800676158455	0.04018898368065219	0.04562432452270851	1.1861217222859217e-08	7.925870740478893	0.3151414827941791	
SVS(ph)EINSDDELSGK	ddPTM_K562_Methotrexat_30min_R1	1	SVSEINSDDELSGK	14	0	F8WF45;A0A2R8Y7M0;P82094;P82094-2	F8WF45	TMF1	TATA element modulatory factor	1	S(0.007)VS(0.992)EINS(0.001)DDELSGK	222.55	2.2414000000000002e-27	19957000.0	3992.8	2635.6	5634.6	3451.9	3047.9	3021.0	2605.4	3721.3	3698.7	4267.3	True	False	3817.281292843725	3071.0881024598584	4451.974461364967	3149.2772864204926	3448.7522733751393	3604.7654944608926	3189.7272721660993	3590.419769747082	3526.7482443097306	3494.450619017555	1.0923838133723385	0.8788471886671781	1.2740126980579898	0.9012224322992134	0.9869225951015833	1.0315685890202542	0.912797924459689	1.0274633014435064	1.0092425473453266	1.0	11.77084994440608														
SVS(ph)ENSLVAMDFSGQTGR	ddPTM_K562_Methotrexat_30min_R1	2	SVSENSLVAMDFSGQTGR	18	0	A0A2R8YCL1;Q13322-3;Q13322-2;Q13322-4;Q13322	A0A2R8YCL1	GRB10	Growth factor receptor-bound protein 10	1	S(0.051)VS(0.948)ENS(0.001)LVAMDFSGQTGR;S(0.005)VS(0.99)ENS(0.005)LVAMDFSGQTGR	85.49600000000001	0.0050766000000000006	44367000.0	2640.3	2022.8700000000001	3148.3	2761.8	2436.3	2089.6000000000004	1996.4099999999999	2863.3	2629.9	3253.4	True	False	2524.235573405955	2357.1148845890784	2487.5148540651203	2519.6772819711227	2756.7161532936943	2493.3856263573266	2444.1557624261627	2762.5961160661104	2507.6365230243505	2664.1777339094288	0.9474726634329603	0.884743857208894	0.9336895291947838	0.9457617072242904	1.0347343265452769	0.935893125530525	0.9174146797029173	1.0369413725308265	0.9412422043422123	1.0	11.379474616048917	-7.361036976606459	3.177081027703315	0.9751412676898034	0.9172182033763252	0.2690117348533043	0.04057161016852975	0.33761397618404	6.495476909393548	0.011794801615220197	0.018829759573288866	4.3547479500669743e-08	7.361036976606459	-0.057923064313478156	
SVS(ph)PLLSTHVLGK	ddPTM_K562_Methotrexat_30min_R1	1	SVSPLLSTHVLGK	13	0	X6RL08;X6R907;Q96H12-2;Q96H12	X6RL08	MSANTD3	Myb/SANT-like DNA-binding domain-containing protein 3	1	S(0.015)VS(0.939)PLLS(0.023)T(0.023)HVLGK	97.551	0.007387	8739800.0	1875.8	1649.8	2442.0	1951.9	1576.6	1394.6	1155.2	1787.2	2230.4	2443.7	True	False	1793.3420780195004	1922.401408194822	1929.4575719045272	1780.7799575202516	1783.950534533036	1664.0867125372945	1414.2830063737924	1724.3431630053972	2126.709190826082	2001.122250062848	0.8961681766134868	0.9606616527972972	0.9641877560673416	0.8898906388474386	0.891475038307634	0.8315767377455483	0.7067449309153276	0.8616880667591607	1.0627582551537216	1.0	10.96659358992275	-5.887113719286276	14.121845716581715	0.8973332252468585	0.8507696519822849	0.0	0.09401809752792406	78408168.71544817	100576405.89726998	0.024807846793547146	114583221.36784457	1.2968396512201478e-06	5.887113719286276	-0.04656357326457361	
SVS(ph)PLVWCR	ddPTM_K562_Methotrexat_30min_R1	1	SVSPLVWCR	9	0	Q9P270	Q9P270	SLAIN2	SLAIN motif-containing protein 2	1	S(0.005)VS(0.995)PLVWCR	85.807	0.020229	14412000.0	1060.8	919.7	1302.8	1138.8	907.87	937.96	809.34	948.0	1183.1	1487.9	True	False	1014.1685021660558	1071.6647927729298	1029.360083815404	1038.9631721010621	1027.270818081002	1119.2074952613502	990.8550972806133	914.6583026684843	1128.0979392334725	1218.4268919542133	0.8323589284371825	0.8795478824782877	0.8448271214405254	0.8527086680060775	0.8431123975221695	0.9185676240831103	0.8132249081365879	0.7506878818157732	0.925864281790544	1.0	10.250803973737845	-9.99844431684865	24.93656125030396	1.0000000092289245	0.8448014584079568	0.6097146624952026	0.04089425278827984	24.834310367757055	398067.95528610225	0.040453934741112196	0.010445161041037656	1.003588516195659e-10	9.99844431684865	-0.15519855082096767	
SVS(ph)PQTLEAYIR	ddPTM_K562_Methotrexat_30min_R1	1	SVSPQTLEAYIR	12	0	A0A2R8Y7K2;A0A2R8Y481;A0A2R8YGN6;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0	A0A2R8Y7K2	SPAST	Spastin	1	S(0.237)VS(0.545)PQT(0.218)LEAYIR	97.631	0.016766	0.0	1040.0	1049.5	1238.0	1166.6	889.96	937.41	1157.5	781.33	1188.4	1239.6	True	False	994.2828452608385	1222.9120365501676	978.1607182710085	1064.3259892633464	1007.0053391557917	1118.5512155453775	1417.0988399218015	753.8501810379404	1133.1515433902948	1015.096428030407	0.9794959550690636	1.2047249924058796	0.9636135949851928	1.0484974233713535	0.9920292411132661	1.1019162166846592	1.3960238660985147	0.7426389850475948	1.1162994096915013	1.0	9.987401065898608	-9.291382297037215	24.995918094843276	0.9471020229441821	1.091141881498608	0.1661596840737738	0.1481794730602699	1326.9052503297944	1107673.8536658245	0.07852577034974717	0.03772952142830334	5.112316148117007e-10	9.291382297037215	0.14403985855442591	
SVS(ph)PSPVPLLFQPDQNAPPIR	ddPTM_K562_Methotrexat_30min_R1	1	SVSPSPVPLLFQPDQNAPPIR	21	0	Q02241-2;Q02241-3	Q02241-2	KIF23	Kinesin-like protein KIF23	1	S(0.067)VS(0.929)PS(0.004)PVPLLFQPDQNAPPIR	221.81	7.084400000000001e-42	119490000.0	2746.8	2428.6	3248.0	3194.0	2365.3	2349.3	2914.5	3474.2	2896.3	3094.8	True	False	2626.0539609254542	2829.884870858253	2566.2891865462343	2913.9869790049115	2676.3784088107277	2803.268975881158	3568.1508155093647	3352.010416804693	2761.6516451710827	2534.301730774852	1.0362041461111062	1.1166329709260894	1.012621802440865	1.1498184859440443	1.0560614690471117	1.1061307112093832	1.4079423819903314	1.3226564051549734	1.0897090948703727	1.0	11.307372584822764	-8.549248139788116	24.997398832866562	1.2355467311096189	1.0777640531900936	0.21515455126350103	0.11278457755784184	270.5943714348046	256512.90571112875	0.04171766245257368	0.03231518719580813	2.823266404094517e-09	8.549248139788116	-0.15778267791952527	
SVS(ph)PTFLNPSDENLK	ddPTM_K562_Methotrexat_30min_R1	2	SVSPTFLNPSDENLK	15	0	Q9UKA4	Q9UKA4	AKAP11	A-kinase anchor protein 11	1	SVS(0.986)PT(0.014)FLNPSDENLK;S(0.001)VS(0.995)PT(0.004)FLNPSDENLK	224.55	1.4645e-36	90845000.0	8014.4	5265.700000000001	10862.9	8014.700000000001	6185.799999999999	5881.7	5442.9	7304.3	7765.1	10164.6	True	False	7662.0965721716	6135.767423403733	8582.925740311914	7312.063694624507	6999.341124263892	7018.255282611928	6663.608877589954	7047.403628883346	7404.1021958768	8323.692443012162	0.920516540541334	0.7371448987828452	1.0311440264131073	0.8784639442995122	0.8408937706654361	0.8431660985388566	0.8005592377676247	0.8466679514089597	0.889521356845979	1.0	13.023007943735994	-10.134046032436189	4.35903693387921	0.9999897552769498	0.8611120936887106	0.2433471569617418	0.07261119700095629	1.3208431545698893	40.95603880522299	0.06887007218490677	0.018022968070306282	7.344360185128337e-11	10.134046032436189	-0.13887766158823922	
SVS(ph)SYGNIR	ddPTM_K562_Methotrexat_30min_R1	1	SVSSYGNIR	9	0	Q8N122;Q8N122-3	Q8N122	RPTOR	Regulatory-associated protein of mTOR	1	SVS(0.5)S(0.5)YGNIR	181.87	1.1331e-06	176150000.0	4846.1	3209.4	4117.8	4943.7	3916.7	3333.3	3915.5	4250.8	4923.0	4789.7	True	False	4633.071246556301	3739.698799527496	3253.5300530665263	4510.293496589412	4431.814701639951	3977.4130495486593	4793.650546621001	4101.296954623624	4694.130804535869	3922.238916858054	1.1812312673363778	0.9534602248358742	0.8295083808083769	1.1499282915183617	1.1299196187646052	1.0140669994511204	1.2221719911088433	1.0456519966175355	1.1967987937604134	1.0	11.937461702310493	-7.316557358452613	24.999953220695332	1.111976015488722	0.9846047309565903	0.21375486392547338	0.10550403045826963	415.90170612893525	188640.11189361673	0.029033416260188977	0.04306354275685491	4.824392587877309e-08	7.316557358452613	-0.12737128453213165	
SVS(ph)TPSEAGSQDSGDGAVGSR	ddPTM_K562_Methotrexat_30min_R1	1	SVSTPSEAGSQDSGDGAVGSR	21	0	E9PGG1;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E7ETL8;E7EMU4;E7EUM4;E7ESD3;E7ET01;E7ERH4;E7ERR6;Q13409-7;Q13409-5;Q13409	E9PGG1	DYNC1I2	Cytoplasmic dynein 1 intermediate chain 2	1	SVS(0.228)T(0.228)PS(0.228)EAGS(0.228)QDS(0.087)GDGAVGSR	312.27	1.4522999999999992e-261	7262600.0	2148.4	1996.3	2610.7	2373.3	1961.8	2013.0	1744.8	2291.3	1866.6	2414.5	True	False	2053.9589084215254	2326.1546437018565	2062.749747326432	2165.236473785961	2219.8110862913304	2401.9837604600393	2136.115815028561	2210.713680278796	1779.8221734199985	1977.2106530166325	1.0388164282282204	1.1764829610607448	1.043262509323067	1.0950965039979212	1.1226983239770443	1.2148345229656385	1.0803683521376373	1.1180971925808247	0.9001682095453623	1.0	10.94925086937241	-9.751562771443648	24.998460211282445	0.9500841048018501	1.1133904723846852	0.5702995524051249	0.055917709176641524	119.98586026214404	303698.78500848875	0.037652180344745254	0.01384941638926759	1.7718919234088972e-10	9.751562771443648	0.16330636758283512	
SVS(ph)TRSPHQLLSPSSFSPSATPSQK	ddPTM_K562_Methotrexat_30min_R1	1	SVSTRSPHQLLSPSSFSPSATPSQK	25	1	E9PIQ6;A0A3B3ITS5;Q14181	E9PIQ6	POLA2	DNA polymerase alpha subunit B	1	S(0.091)VS(0.303)T(0.303)RS(0.303)PHQLLSPS(0.001)SFSPSATPSQK	75.10600000000001	0.00061968	34762000.0	2264.4	1734.3	2605.7	2602.3	1632.8	1510.2	1692.2	1855.2	2068.9	2703.5	True	False	2164.8596873160022	2020.8635969404065	2058.79917899739	2374.160399331396	1847.5418196026533	1802.0247764762796	2071.7189260610558	1789.9515644626292	1972.717290575716	2213.8699525493753	0.9778621751576079	0.9128194700927609	0.9299548858443947	1.0724028286293144	0.8345304192213829	0.813970474824487	0.9357907060780034	0.8085170325390685	0.8910718934976463	1.0	11.112354762281754	-7.794479765257171	24.9999764516101	0.8704959762626252	0.9658496910616018	0.3031799104734829	0.06736963027767114	221.85371795904146	167864.16434930786	0.020240451633966382	0.022951924147798713	1.6051670446462243e-08	7.794479765257171	0.09535371479897659	
SVS(ph)TTNIAGHFNDESPLGLR	ddPTM_K562_Methotrexat_30min_R1	2	SVSTTNIAGHFNDESPLGLR	20	0	V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF5;V9GYG5;V9GZ14	V9GYM8	ARHGEF2	Rho guanine nucleotide exchange factor 2	1	S(0.148)VS(0.495)T(0.266)T(0.092)NIAGHFNDESPLGLR;S(0.065)VS(0.689)T(0.192)T(0.054)NIAGHFNDESPLGLR	175.77	3.2917e-12	84120000.0	1153.85	1014.3399999999999	1612.13	1126.4	1209.8899999999999	967.07	1097.8200000000002	1170.4	1156.26	1324.49	True	False	1103.1281355809795	1181.942444167982	1273.7659440599696	1027.6502608488202	1369.0117418661528	1153.942590774015	1344.034080728252	1129.2363686109657	1102.5057249751455	1084.612026429489	1.0170716428550446	1.0897375424269469	1.1743977689913412	0.9474818974963929	1.262213315458892	1.0639219948286578	1.2391841948800557	1.0411431379093026	1.0164977873282135	1.0	10.082963357153469	-9.504525896757276	24.440830490815863	1.015106021454303	1.114289463680094	0.1907202243062328	0.09040964807557077	880.0615807641218	1172004.6516363337	0.04841529991286169	0.022555242060418076	3.1294938558858165e-10	9.504525896757276	0.0991834422257909	
SVS(ph)VDIR	ddPTM_K562_Methotrexat_30min_R1	2	SVSVDIR	7	0	Q6UB99	Q6UB99	ANKRD11	Ankyrin repeat domain-containing protein 11	1	S(0.004)VS(0.996)VDIR;S(0.016)VS(0.984)VDIR	106.36	0.011542	15643000.0	17397.1	15086.699999999999	18941.9	18259.1	15473.5	14294.7	14286.5	16366.5	16650.7	18058.1	True	False	16632.344314699352	17579.520744946556	14966.254046379338	16658.353052081577	17508.536468411094	17056.94846529961	17490.611297229218	15790.880918379497	15876.612591323448	14787.603103433286	1.124749169852805	1.1888012291096088	1.0120811291523353	1.1265079902106618	1.1840009733792543	1.153462690741236	1.1827887978118892	1.0678458711617216	1.073643407946033	1.0	13.85210060703545	-9.814983909604509	1.6290685194925911	1.0068301584946582	1.1366869694226343	0.41825850331463366	0.050668167484976046	0.35657110560840083	1.9517573872480465	0.049378229388703225	0.014701784676314755	1.531144188765137e-10	9.814983909604509	0.12985681092797607	
SVSAS(ph)SGPCSPAAPHPPPPPR	ddPTM_K562_Methotrexat_30min_R1	1	SVSASSGPCSPAAPHPPPPPR	21	0	Q86UY5	Q86UY5	FAM83A	Protein FAM83A	1	S(0.004)VS(0.004)AS(0.496)S(0.496)GPCSPAAPHPPPPPR	195.36	4.6437e-22	20005000.0	846.41	528.25	1052.5	596.91	822.09	688.86	656.29	651.97	788.87	943.66	True	False	809.2028298627172	615.534333785256	831.5946332635195	544.5798270625613	930.2092445352426	821.972445718084	803.4797387924655	629.0398455598857	752.1956058854787	772.7540297476397	1.0471674021900355	0.7965462619279677	1.0761440267546654	0.7047259620767118	1.203758516586479	1.0636922152143518	1.0397613054892252	0.8140233778726627	0.9733959020972368	1.0	9.59386546222513	-5.930930147788811	20.715112340944216	0.963587104040651	3.3025009965347594	0.02979148670043108	0.14313562359522503	2198.361043175958	690583.4350536183	0.033764944602375065	11211.944648521661	1.1723839173876004e-06	5.930930147788811	2.3389138924941086	
SVSASS(ph)GPCSPAAPHPPPPPR	ddPTM_K562_Methotrexat_30min_R1	3	SVSASSGPCSPAAPHPPPPPR	21	0	Q86UY5	Q86UY5	FAM83A	Protein FAM83A	1	SVS(0.002)AS(0.048)S(0.95)GPCSPAAPHPPPPPR;S(0.001)VS(0.005)AS(0.123)S(0.871)GPCSPAAPHPPPPPR;S(0.002)VS(0.002)AS(0.15)S(0.847)GPCSPAAPHPPPPPR	190.63	1.5752000000000001e-19	70029000.0	2384.64	2146.2999999999997	3445.99	2527.37	2554.11	2628.71	2278.0099999999998	3001.0699999999997	2740.3900000000003	3162.6000000000004	True	False	2279.8140808873136	2500.9395941378025	2722.7237912396718	2305.799396095068	2890.020233259023	3136.6710039537547	2788.9117307388874	2895.520667077331	2612.9898670408384	2589.8224937794184	0.8802974282458645	0.9656799259968176	1.0513167592680477	0.8903310561374167	1.1159144073389815	1.2111528923267252	1.0768736998144344	1.118038272519518	1.0089455448460527	1.0	11.338637503763081	-7.773840482724016	24.999563474913565	1.0999419906177834	0.9557051555555269	0.47988582135244695	0.07138105640020473	193.648952097217	390378.3661822578	0.022188531062964763	0.02533506016386945	1.6832922243090466e-08	7.773840482724016	-0.14423683506225649	
SVSASSGPCS(ph)PAAPHPPPPPR	ddPTM_K562_Methotrexat_30min_R1	1	SVSASSGPCSPAAPHPPPPPR	21	0	Q86UY5	Q86UY5	FAM83A	Protein FAM83A	1	SVSAS(0.001)S(0.04)GPCS(0.958)PAAPHPPPPPR	118.66	6.0711e-06	25773000.0	1202.2	984.51	1386.3	1217.0	1000.2	1064.4	1136.0	1476.6	1247.8	1158.8	True	False	1149.3527274736346	1147.1835436912872	1095.3345749104192	1110.3074995143954	1131.7438314346966	1270.080235784236	1390.7769176251968	1424.6671410551521	1189.7900503554454	948.9300909984163	1.2112090641622963	1.2089231383570929	1.154283740499749	1.1700624841037404	1.192652485331067	1.3384339350519718	1.4656263204404147	1.5013404618207327	1.2538226594791704	1.0	9.890157995582797	-8.270542249456042	5.118013791863211	1.3539456779642045	1.1850325644437436	0.1487162812726437	0.13114395952704797	0.2437626953986366	20.53486868094254	0.04414752504563853	0.040867965089005656	5.36361690045205e-09	8.270542249456042	-0.1689131135204609	
SVSGSPES(ph)DELQELR	ddPTM_K562_Methotrexat_30min_R1	1	SVSGSPESDELQELR	15	0	Q7Z2Z1-2;Q7Z2Z1	Q7Z2Z1-2	TICRR	Treslin	1	S(0.173)VS(0.142)GS(0.282)PES(0.403)DELQELR	156.0	1.4931e-08	8354400.0	779.38	664.36	845.12	931.54	682.36	516.18	590.58	811.48	720.56	915.63	True	False	745.1193884032616	774.1341978108333	667.7408612481383	849.8733345091528	772.1023003577083	615.924479619604	723.0325986013108	782.9397884487574	687.061322875556	749.8005343638932	0.9937568116504438	1.0324535157441357	0.8905579959537216	1.1334658960068067	1.029743598426127	0.8214511078498158	0.9642999243988384	1.044197426603568	0.9163254644229306	1.0	9.550363043573393														
SVSS(ph)PTSSNTPTPTK	ddPTM_K562_Methotrexat_30min_R1	1	SVSSPTSSNTPTPTK	15	0	Q5M775-4;Q5M775;Q5M775-5;Q5M775-3;Q5M775-2	Q5M775-4	SPECC1	Cytospin-B	1	SVS(0.03)S(0.83)PT(0.122)S(0.015)S(0.002)NTPTPTK	130.95	0.00022400000000000002	16087000.0	3271.5	2747.8	4255.1	3533.5	2628.3	2637.3	2446.1	3031.3	3078.5	4188.3	True	False	3127.6887771834927	3201.8272453859454	3362.0126593820446	3223.7235411126667	2973.967518656085	3146.920899881404	2994.7001920801026	2924.6874608428047	2935.3812069396035	3429.7582845432025	0.911926881634476	0.9335431187135059	0.9802476969101684	0.9399273283020944	0.8671070296874221	0.91753430965195	0.8731519668823998	0.85273865333992	0.8558565832957983	1.0	11.743891189346243	-7.722742647186189	10.340051686803301	0.8871413506376319	0.9437033178786243	0.20829412002795566	0.04345407548045348	0.6131476839673616	159.31568625933213	0.012428863595399811	0.01598914991241049	1.893465309792769e-08	7.722742647186189	0.056561967240992383	
SVSS(ph)YGNIR	ddPTM_K562_Methotrexat_30min_R1	3	SVSSYGNIR	9	0	Q8N122;Q8N122-3	Q8N122	RPTOR	Regulatory-associated protein of mTOR	1	SVS(0.039)S(0.961)YGNIR;SVS(0.358)S(0.642)YGNIR;SVS(0.124)S(0.876)YGNIR	169.99	1.466e-07	267941000.0	11907.900000000001	9974.0	10321.2	12381.400000000001	9254.1	9330.2	9799.199999999999	10802.7	12636.400000000001	11363.0	True	False	11384.442974116873	11622.033970987484	8154.9211675434035	11295.94188536362	10471.176355208783	11133.129101760687	11996.920045064113	10422.762917971353	12048.93652212818	9305.050590278734	1.2234692185349905	1.24900277093919	0.876397295041372	1.2139581376553537	1.1253218081531267	1.1964608890350152	1.2892912218658603	1.1201188877855568	1.2948813555851129	1.0	13.183798278702112	-8.265470094422907	22.108322371656747	1.1944792096427657	1.1335447710231172	0.021324364250808303	0.12510042565146662	246.81041748233773	1353734.2116168733	0.04246580812970655	0.03891990737085709	5.426626178641415e-09	8.265470094422907	-0.06093443861964842	
SVSSNVASVS(ph)PIPAGSK	ddPTM_K562_Methotrexat_30min_R1	2	SVSSNVASVSPIPAGSK	17	0	Q9Y6G9;E9PHI6	Q9Y6G9	DYNC1LI1	Cytoplasmic dynein 1 light intermediate chain 1	1	SVSSNVAS(0.023)VS(0.976)PIPAGSK;SVSSNVAS(0.001)VS(0.999)PIPAGSK	218.05	2.1074e-30	62164000.0	9779.1	8156.5	14474.2	10550.7	7928.700000000001	7952.900000000001	7428.4	10056.8	9246.7	13280.1	True	False	9349.222473163722	9504.222988205276	11436.263221646394	9625.736512018508	8971.463023691545	9489.685369380351	9094.407794794912	9703.096643751493	8816.822935263423	10874.945203199915	0.859702950081325	0.8739559428224697	1.0516157100526182	0.8851296564865603	0.8249662739497504	0.8726191435509987	0.836271597223213	0.892243267662295	0.8107464240527026	1.0	13.408720511060617	-7.508953345555353	24.799806708147248	0.864625904660473	0.9305437561897469	0.10930759494279463	0.06878344730320064	1078.7916982244537	1921226.5658667893	0.019122922223985855	0.027089326047554423	3.0977520599250605e-08	7.508953345555353	0.06591785152927399	
SVSSVLSS(ph)LTPAK	ddPTM_K562_Methotrexat_30min_R1	1	SVSSVLSSLTPAK	13	0	H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9	H0Y4T7	MTA1	Metastasis-associated protein MTA1	1	SVSSVLS(0.234)S(0.766)LT(0.001)PAK	152.4	1.3731e-08	10710000.0	2984.2	2134.2	3150.9	3056.2	2037.6	2199.6	1921.9	3110.6	3751.9	4855.4	True	False	2853.0181411801873	2486.840274802637	2489.56914959622	2788.267691056608	2305.5801149083577	2624.6415695518635	2352.9349982252347	3001.198434895137	3577.4749879216174	3976.040010212036	0.7175526739802702	0.6254565518494412	0.6261428816616599	0.7012675133789495	0.5798684391974729	0.6601144764164221	0.5917785012680886	0.7548209844938375	0.8997582968816343	1.0	11.957116559229304	-9.742528769152	2.05574525223667	0.9936254749992576	0.6421669277802188	0.892537527044348	0.042679783460112954	0.08519435781529418	0.6833939863104065	0.037766082755865585	0.011024713574744448	1.8091360629232945e-10	9.742528769152	-0.3514585472190388	
SVSSVLSSLT(ph)PAK	ddPTM_K562_Methotrexat_30min_R1	1	SVSSVLSSLTPAK	13	0	H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9	H0Y4T7	MTA1	Metastasis-associated protein MTA1	1	SVSSVLS(0.01)S(0.059)LT(0.931)PAK	101.38	0.012301000000000001	9807400.0	2256.3	1281.0	2407.7	2539.6	1714.1	1553.2	1668.8	2104.4	2433.4	3478.8	True	False	2157.115753617337	1492.6634767229773	1902.3566731672934	2316.957210983367	1939.5341946232893	1853.3339179068728	2043.0708803987065	2030.3870592147243	2320.271765134589	2848.7556097387705	0.7572133412367877	0.5239703509912013	0.6677851433320173	0.8133225619855228	0.6808355858932889	0.6505766628667815	0.7171801166145154	0.7127277089946336	0.8144860714630964	1.0	11.476116145094945	-10.13325536421815	1.236053940083823	1.0004090668789796	0.6812328059552305	0.6500030725536197	0.07076618318111974	0.4014419806133079	1.2904476023409013	0.06937488302111587	0.021362758173114747	7.357743365538637e-11	10.13325536421815	-0.31917626092374907	
SVST(ph)PSEAGSQDSGDGAVGSR	ddPTM_K562_Methotrexat_30min_R1	2	SVSTPSEAGSQDSGDGAVGSR	21	0	E9PGG1;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E7ETL8;E7EMU4;E7EUM4;E7ESD3;E7ET01;E7ERH4;E7ERR6;Q13409-7;Q13409-5;Q13409	E9PGG1	DYNC1I2	Cytoplasmic dynein 1 intermediate chain 2	1	S(0.005)VS(0.14)T(0.785)PS(0.07)EAGSQDSGDGAVGSR;S(0.001)VS(0.058)T(0.73)PS(0.211)EAGS(0.001)QDSGDGAVGSR	125.59	2.3741e-06	22656000.0	5064.9	4183.9	5402.5	5157.9	4272.8	4627.3	3736.8999999999996	4701.299999999999	4673.1	5500.700000000001	True	False	4842.2530605400225	4875.21836085969	4268.589079530798	4705.714915156368	4834.748093335508	5521.460235855314	4574.994950240845	4535.952614277794	4455.848600990569	4504.46992712719	1.0749884312421771	1.0823067840901208	0.9476340498632588	1.044676730289001	1.0733223157333762	1.2257735816157902	1.0156566753146543	1.006989210197854	0.9892059827408749	1.0	12.13714162854797	-8.976367479426852	24.999932901468497	1.0011229818279834	1.0723114781911007	0.2380309169343957	0.06335971923573927	383.71395004587686	405915.4656097762	0.02875378324110027	0.01938504851951608	1.055923658497813e-09	8.976367479426852	0.0711884963631173	
SVST(ph)RSPHQLLSPSSFSPSATPSQK	ddPTM_K562_Methotrexat_30min_R1	1	SVSTRSPHQLLSPSSFSPSATPSQK	25	1	E9PIQ6;A0A3B3ITS5;Q14181	E9PIQ6	POLA2	DNA polymerase alpha subunit B	1	S(0.234)VS(0.197)T(0.284)RS(0.284)PHQLLS(0.001)PSSFSPSATPSQK	97.48200000000001	1.1829000000000001e-05	30334000.0	1382.4	1087.3	1758.8	1670.2	873.28	1079.0	913.99	1126.9	1407.8	1476.8	True	False	1321.6313512390227	1266.9578440600253	1389.6519154241123	1523.7761591527872	988.1316267899343	1287.5014791536921	1118.975523715012	1087.2662882670002	1342.3516852784057	1209.3372095154132	1.0928559386414698	1.047646457986438	1.1491020903763907	1.2600093234238374	0.8170852753186045	1.064633973901787	0.9252799921399844	0.8990596499570808	1.109989566777898	1.0	10.240000863958167	-7.7568664993991465	24.999999993573283	0.9668559532783233	1.1318278310402066	0.4423972697569559	0.09232375846034437	112.25621118429453	613701.8922563664	0.02729636313315317	0.03406117073433659	1.750384668043039e-08	7.7568664993991465	0.16497187776188327	
SVSTPSEAGSQDS(ph)GDGAVGSR	ddPTM_K562_Methotrexat_30min_R1	2	SVSTPSEAGSQDSGDGAVGSR	21	0	E9PGG1;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E7ETL8;E7EMU4;E7EUM4;E7ESD3;E7ET01;E7ERH4;E7ERR6;Q13409-7;Q13409-5;Q13409	E9PGG1	DYNC1I2	Cytoplasmic dynein 1 intermediate chain 2	1	SVSTPSEAGS(0.09)QDS(0.885)GDGAVGS(0.025)R;SVST(0.001)PS(0.008)EAGS(0.004)QDS(0.986)GDGAVGSR	168.3	9.337999999999999e-18	13357700.0	1986.17	1969.43	2584.8999999999996	2094.4	1944.3200000000002	1750.44	1801.11	2249.0	2266.8	2740.8	True	False	1898.8603449728068	2294.844832913765	2042.3648147485703	1910.7872037657764	2200.03215990313	2088.68775641315	2205.054765936549	2169.9013952546643	2161.416962771055	2244.4145611049858	0.8460381508298301	1.0224692321475366	0.9099766371784093	0.8513521685695375	0.9802253995447235	0.9306158463812643	0.9824632241072884	0.9668006226917203	0.9630203796694898	1.0	11.132123462396391	-8.296980754871278	1.5659574081427328	0.973840834601833	0.919098665539183	0.22848238126405152	0.05004870892809991	0.6875604892973819	3.357174021679291	0.022199730371854173	0.01960962476130429	5.046836613909154e-09	8.296980754871278	-0.05474216906265006	
SVSTTGS(ph)LQR	ddPTM_K562_Methotrexat_30min_R1	4	SVSTTGSLQR	10	0	H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-4;Q7Z460-5;Q7Z460-3;Q7Z460	H0Y5T1;Q7Z460	CLASP1	CLIP-associating protein 1	1	S(0.247)VS(0.022)T(0.001)T(0.001)GS(0.729)LQR;S(0.266)VS(0.016)T(0.002)T(0.001)GS(0.715)LQR;S(0.075)VS(0.03)T(0.004)T(0.004)GS(0.887)LQR;S(0.055)VS(0.027)T(0.003)T(0.002)GS(0.913)LQR	106.67	0.0037549	229979000.0	9302.099999999999	8558.6	9504.300000000001	9449.8	8352.8	8769.199999999999	8606.4	9792.5	10080.1	11550.4	True	False	8893.190822020048	9972.763178673904	7509.477313944386	8621.350705760991	9451.339607286278	10463.723791468541	10536.604281557653	9448.092224558162	9611.478351168389	9458.510634335613	0.9402316248116928	1.0543692938792593	0.7939386658491471	0.9114913583185472	0.9992418439512767	1.106276050849261	1.1139813326749797	0.9988985147683156	1.0161724950942577	1.0	13.20739731499001	-7.943886555715188	4.343892033270398	1.0515907524539212	0.9258481809267741	0.4063634434133553	0.06931961940353613	0.22135771548366057	8.679603678747952	0.02335528974235933	0.026310824471137164	1.1379244900858156e-08	7.943886555715188	-0.12574257152714707	
SVSTTNIAGHFNDES(ph)PLGLR	ddPTM_K562_Methotrexat_30min_R1	1	SVSTTNIAGHFNDESPLGLR	20	0	V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF5;V9GYG5;V9GZ14	V9GYM8	ARHGEF2	Rho guanine nucleotide exchange factor 2	1	SVSTTNIAGHFNDES(1)PLGLR	106.31	0.00020784	9093000.0	449.48	305.01	450.73	420.38	382.95	479.34	359.77	326.39	653.49	646.74	True	False	429.7213973921555	355.40771821645245	356.1279325898965	383.52593808205535	433.3146373204529	571.9656710079066	440.45758068135325	314.9106787003869	623.1093925362873	529.6091189612663	0.8113935013713081	0.6710755262551393	0.6724354242396313	0.7241679275354491	0.818178203144089	1.079977006683184	0.8316654017310581	0.5946096232595616	1.176545815069055	1.0	9.048784152869507	-7.923850485719861	4.083659158557552	0.9087403186941478	0.7139626417767078	0.3048420599146058	0.15100591503561167	0.30953123351853545	10.051991481488688	0.048415103620284484	0.05497980045124143	1.1916521867442439e-08	7.923850485719861	-0.19477767691744008	
SVSTTNIAGHFNDES(ph)PLGLRR	ddPTM_K562_Methotrexat_30min_R1	2	SVSTTNIAGHFNDESPLGLRR	21	1	V9GYM8;A0A5F9ZI21;Q92974-3;Q92974-2;Q92974;V9GYF5;V9GYG5;V9GZ14	V9GYM8	ARHGEF2	Rho guanine nucleotide exchange factor 2	1	SVSTTNIAGHFNDES(1)PLGLRR;SVSTTNIAGHFNDES(1)PLGLRR	110.25	3.1033e-05	139626000.0	2778.49	2248.04	3017.2599999999998	2785.71	2397.9900000000002	2265.9700000000003	2786.02	3176.79	2837.2200000000003	4135.86	True	False	2656.3509064699865	2619.4903998534924	2383.978359297563	2541.4911293937926	2713.3677167987285	2703.836632732061	3410.8559049666856	3065.0604950782877	2705.3182614757775	3386.8156766971924	0.7843210732567673	0.773437544262228	0.7038996470048255	0.7504072769239817	0.801156004877358	0.7983418322218322	1.0070981802862495	0.9049977287418609	0.798779301775877	1.0	11.725713756716774	-8.603006170564237	6.432451532578583	0.919365641569404	0.7631195646075546	0.6392349656733425	0.058902024223892596	0.1466824994169487	9.443840943406515	0.023175851657848377	0.017873704817677825	2.4945592833711483e-09	8.603006170564237	-0.15624607696184944	
SVT(ph)PASTLTK	ddPTM_K562_Methotrexat_30min_R1	1	SVTPASTLTK	10	0	A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6	A8MQ02	MLLT4	Afadin	1	S(0.047)VT(0.953)PASTLTK	124.6	0.0066905	62806000.0	4294.2	2586.7	4964.9	4415.1	2728.6	2717.7	3037.1	3226.6	3584.8	5153.3	True	False	4105.432109729895	3014.108208617741	3922.835339372965	4028.0350378849685	3087.4587267073716	3242.857061998138	3718.2469863727897	3113.118649145709	3418.1434304489485	4219.987433502014	0.9728541078433844	0.7142457782430983	0.9295846021317524	0.9545135148760974	0.73162746936078	0.7684518290868484	0.8811038053938355	0.7377080378085972	0.809989006913311	1.0	12.043022987468643	-6.216930273406421	22.57608384923177	0.8307706811705704	0.9728558574754075	0.15109200454178573	0.09624555681450916	17774.482927732897	9014930.323077295	0.0234515358761499	9.767261966699856	6.06833749784995e-07	6.216930273406421	0.14208517630483708	
SVTEQGAELSNEER	ddPTM_K562_Methotrexat_30min_R1	2	SVTEQGAELSNEER	14	0	E5RGE1;E5RIR4;E9PD24;E7EVZ2;E7ESK7;E7EX29;P63104	E5RGE1	YWHAZ	14-3-3 protein zeta/delta	0	;	163.45	0.00011842	22109000.0	906.02	780.81	795.29	797.8399999999999	732.12	763.7	687.22	803.75	805.3	870.8600000000001	False	True	866.1924456377164	909.825580999272	628.3694972808972	727.8946059265116	828.4066125474614	911.2742165242583	841.3465786359048	775.4816569301628	767.8617787716302	713.1388151940629	1.214619688597379	1.2758043197405904	0.8811320936301892	1.0206913302404292	1.1616344460538601	1.2778356711326642	1.1797795333955472	1.0874203456715996	1.0767353598088414	1.0	9.478039119879154	-9.912700831833103	1.8442814218508607	1.00417286313014	1.1389117352605018	0.13346754947599204	0.11310869651433751	0.7731804276852161	5.783098942991346	0.11788839997296466	0.03379388014715286	1.222641599231813e-10	9.912700831833103	0.13473887213036173	
SVTVVEDDEDEDGDDLLHHHHVS(ph)GSR	ddPTM_K562_Methotrexat_30min_R1	1	SVTVVEDDEDEDGDDLLHHHHVSGSR	26	0	Q3BDU5;P02545-2;Q5TCI8	Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	1	SVTVVEDDEDEDGDDLLHHHHVS(0.5)GS(0.5)R	102.24	2.4796e-07	14134000.0	849.13	769.97	946.31	714.94	910.78	647.19	643.73	865.91	784.64	1099.0	True	False	811.8032619195537	897.1944552477686	747.692463091307	652.2623202159589	1030.5635340872757	772.2503079642992	788.1028390694262	835.4554544975399	748.1622576622021	899.9604504722639	0.9020432636718105	0.9969265369127679	0.8308059123030876	0.7247677604873384	1.145120914531829	0.8580936057346215	0.8757083032436156	0.9283246325537147	0.831327929210218	1.0	9.813717792148987	-6.748504321291099	24.988671724231843	0.8969450767879776	0.949484851731874	0.03272378887744121	0.10862004315314061	940.0460958009864	1816002.8558861406	0.027343471903243016	0.07136184746749043	1.7844142332797595e-07	6.748504321291099	0.05253977494389639	
SVTVVEDDEDEDGDDLLHHHHVSGS(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	SVTVVEDDEDEDGDDLLHHHHVSGSR	26	0	Q3BDU5;P02545-2;Q5TCI8	Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	1	SVTVVEDDEDEDGDDLLHHHHVS(0.305)GS(0.695)R;SVTVVEDDEDEDGDDLLHHHHVS(0.246)GS(0.754)R	84.515	0.00027337	45191000.0	3026.57	2997.6000000000004	3321.02	3000.7400000000002	3213.61	2875.5299999999997	2602.1	3687.4	3462.0	3395.3199999999997	True	False	2893.525606712591	3492.9024495119425	2623.9832864235746	2737.669783149404	3636.256042928272	3431.1854757653537	3185.6871631624335	3557.7120519617856	3301.052375645575	2780.394646676509	1.0406888137881112	1.2562613921326298	0.9437449067024	0.984633525467985	1.3078201136931407	1.2340641929615117	1.1457679818835729	1.279570889770784	1.1872603695275503	1.0	11.441073956961352	-7.755640944733509	24.998647868802678	1.2061426862023998	1.0625708793507471	0.2625899353922624	0.11008851161920252	188.24143063534427	811555.5376920331	0.03255901606300844	0.04088183281149259	1.7553311314247855e-08	7.755640944733509	-0.14357180685165272	
SVTVVEDDEDEDGDDLLHHHHVSGS(ph)RR	ddPTM_K562_Methotrexat_30min_R1	1	SVTVVEDDEDEDGDDLLHHHHVSGSRR	27	1	Q3BDU5;P02545-2;Q5TCI8	Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	1	SVT(0.001)VVEDDEDEDGDDLLHHHHVS(0.246)GS(0.753)RR	40.402	0.028033	26097000.0	3908.3	2978.0	4130.1	4534.6	3645.2	3534.3	3426.3	4036.6	4013.4	4492.4	True	False	3736.495811666284	3470.063882654979	3263.248451155972	4137.058658420685	4124.607692807195	4217.253454840498	4194.734993714097	3894.630490033338	3826.8179099988315	3678.782827753955	1.0156880649428184	0.9432641297756608	0.8870456898235323	1.1245726785526302	1.121188144537859	1.1463719529797036	1.1402507813365954	1.058673662563323	1.0402402341144061	1.0	11.845012795827492	-7.269678379700362	24.915355612128632	1.0983490415382586	0.9481257769840785	0.5958190456216934	0.05311651865915443	372.8075011110662	1127397.1717111138	0.015330749979407395	0.023185977743083962	5.374296469186096e-08	7.269678379700362	-0.1502232645541801	
SVTVVEDDEDEDGDDLLHHHHVSGSR	ddPTM_K562_Methotrexat_30min_R1	4	SVTVVEDDEDEDGDDLLHHHHVSGSR	26	0	Q3BDU5;P02545-2;Q5TCI8	Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	0	;;;	285.27	3.553499999999999e-172	154939000.0	5833.07	5358.9800000000005	5885.05	5016.93	4945.0	4998.73	4653.19	4872.799999999999	5263.610000000001	5610.34	False	True	5576.655227120805	6244.460357914834	4649.858428966724	4577.10353618632	5595.354175609457	5964.6638265893735	5696.786307503867	4701.420862070666	5018.905919980307	4594.253060693864	1.2138328371225091	1.3591894646246894	1.012103244540139	0.996267178955755	1.2179029108083999	1.2982880454757835	1.2399809571315796	1.0233264907180832	1.0924313166202273	1.0	12.165614610109523	-15.999999928838	0.10581716389393617	0.42958607550431577	1.2702177567018769	0.19485476768305277	0.11589521606912168	336.13305355590234	2.3842677700874284	40.95746372634664	1.8316429209625869	1.0000001638565755e-16	15.999999928838	0.8406316811975612	
SVTVVEDDEDEDGDDLLHHHHVSGSRR	ddPTM_K562_Methotrexat_30min_R1	3	SVTVVEDDEDEDGDDLLHHHHVSGSRR	27	1	Q3BDU5;P02545-2;Q5TCI8	Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	0	;;	78.354	0.0012062999999999998	72011000.0	4033.17	3544.8599999999997	4676.099999999999	5109.6	3652.0	4156.0	3455.8199999999997	3330.36	3641.1000000000004	4600.0	False	True	3855.8766759814007	4130.587862682447	3694.6505126874536	4661.649301165777	4132.302011997114	4959.088181059079	4230.87560516506	3213.2293511339817	3471.8260557374656	3766.895425088637	1.023621906331703	1.0965496507207264	0.9808210995399526	1.237530851033935	1.0970047069729523	1.3164921298398904	1.1231730981927923	0.8530179334772409	0.921667756586519	1.0	11.879160267031493	-9.249027419480445	23.207112290039532	0.9155071453329486	1.1289992137619735	0.47329375233905957	0.0965330572446315	237.44331707953847	443958.7408909673	0.047298731094758455	0.02700536201591689	5.636020712987128e-10	9.249027419480445	0.2134920684290249	
SVVS(ph)FDK	ddPTM_K562_Methotrexat_30min_R1	1	SVVSFDK	7	0	Q15424-2;Q15424;Q15424-4;Q15424-3	Q15424-2	SAFB	Scaffold attachment factor B1	1	S(0.012)VVS(0.988)FDK	99.68799999999999	0.009932	27950000.0	5707.5	4647.6	8122.0	5274.9	4305.9	4101.6	3484.3	4011.6	5439.1	5173.6	True	False	5456.605133967532	5415.536904307347	6417.303193697199	4812.457706810582	4872.2013235099585	4894.176150970143	4265.742970142142	3870.5097542034746	5186.237428184247	4236.610906790993	1.2879646618529386	1.2782710103556165	1.5147256462496257	1.1359215686048834	1.1500233159717732	1.155210204251969	1.0068762659569357	0.9135863168362515	1.2241476836758995	1.0	12.04869492136027	-7.43569741125557	5.830635095432924	1.0769836552083536	1.3516599255761643	0.6043397423635568	0.10342124610851645	0.1621928904800696	8.589824188247247	0.03015564221556979	0.04480582291663188	3.666929739822512e-08	7.43569741125557	0.2746762703678107	
SVVSDLEADDVKGSVPLS(ph)SSPPATHFPDETEITNPVPK	ddPTM_K562_Methotrexat_30min_R1	1	SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK	38	1	P11388;P11388-2;P11388-3;P11388-4	P11388	TOP2A	DNA topoisomerase 2-alpha	1	SVVSDLEADDVKGS(0.014)VPLS(0.229)S(0.229)S(0.229)PPAT(0.229)HFPDET(0.031)EIT(0.037)NPVPK	69.181	1.2418e-05	153020000.0	2265.7	1063.3	3341.0	2131.2	1237.1	1259.3	1146.4	1738.4	1702.7	2993.2	True	False	2166.102540872578	1238.9922519902739	2639.76975746643	1944.361004901461	1399.8003338011042	1502.6419024080128	1403.5093823640193	1677.2594866655004	1623.5418486457895	2451.1024752989792	0.8837258183619444	0.5054836607103278	1.0769724171342274	0.7932597777921516	0.5710900902380102	0.6130473603412784	0.5726033066784867	0.6842877862382774	0.6623720815457762	1.0	11.259215086090487	-5.929520703635021	18.962554221783904	0.7099357657734177	4.655139536064584	0.06815222882268213	0.17833746932354458	530.682466964166	146644.83287086344	0.04288434652465308	2364.5221282203393	1.1761949119238784e-06	5.929520703635021	3.945203770291166	
SVVSDLEADDVKGSVPLSS(ph)SPPATHFPDETEITNPVPK	ddPTM_K562_Methotrexat_30min_R1	3	SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK	38	1	P11388;P11388-2;P11388-3;P11388-4	P11388	TOP2A	DNA topoisomerase 2-alpha	1	SVVSDLEADDVKGSVPLS(0.069)S(0.296)S(0.296)PPAT(0.296)HFPDET(0.008)EIT(0.035)NPVPK;SVVSDLEADDVKGS(0.008)VPLS(0.096)S(0.399)S(0.399)PPAT(0.096)HFPDET(0.003)EIT(0.001)NPVPK;SVVSDLEADDVKGSVPLS(0.103)S(0.375)S(0.375)PPAT(0.143)HFPDET(0.001)EIT(0.001)NPVPK	91.115	1.3979e-10	835620000.0	12337.2	7558.9	21293.1	14524.5	8519.099999999999	7192.700000000001	7215.0	10162.7	10652.6	17280.5	True	False	11794.871460146172	8807.879745668473	16823.96929742844	13251.159635741027	9639.510972180891	8582.587478321377	8833.147412557917	9805.27208072681	10157.362951127108	14150.833998531354	0.8335106935301696	0.6224283138776555	1.1889030214879575	0.936422520193248	0.68119737488132	0.6065075372385911	0.6242139094752059	0.6929112504425147	0.7177925309689374	1.0	13.788599462294828														
SVYATMGDHENRS(ph)PVKEPVEQPR	ddPTM_K562_Methotrexat_30min_R1	2	SVYATMGDHENRSPVKEPVEQPR	23	2	Q96T58	Q96T58	SPEN	Msx2-interacting protein	1	SVY(0.002)AT(0.005)MGDHENRS(0.993)PVKEPVEQPR;S(0.001)VY(0.003)AT(0.01)MGDHENRS(0.987)PVKEPVEQPR	51.688	0.020406	61496000.0	2789.8999999999996	2029.51	3972.6	3414.4	2406.4	2360.3	2141.1	3049.1000000000004	2808.8	3562.2	True	False	2667.2593365319344	2364.852031728377	3138.805548791124	3115.0648531979887	2722.883779208615	2816.3945702006135	2621.2961781050253	2941.8614247536684	2678.2195010725877	2917.0510615762482	0.9143684084469412	0.8106995667228784	1.0760200910213238	1.067881496566859	0.933437132820461	0.9654937506231913	0.8986116878902319	1.0085052892985746	0.918125683965708	1.0	11.510294924802217	-6.74833023020772	24.999999993603517	0.9813626780862579	0.8625339873215493	0.3917568860555267	0.060248304345006415	245.0740865121005	467364.3186540351	0.015918038220741608	0.041572552153371745	1.7851296761231886e-07	6.74833023020772	-0.11882869076470859	
SWDSS(ph)S(ph)PVDRPEPEAASPTTR	ddPTM_K562_Methotrexat_30min_R1	1	SWDSSSPVDRPEPEAASPTTR	21	1	C9J0I9;Q86WB0;Q86WB0-2	C9J0I9	ZC3HC1	Nuclear-interacting partner of ALK	2	S(0.067)WDS(0.158)S(0.754)S(0.649)PVDRPEPEAAS(0.358)PT(0.013)TR	84.94	0.0043622	45145000.0	2304.1	2030.9	2327.8	2145.5	1935.6	1988.5	1895.9	2189.3	2336.5	2973.4	True	False	2202.8145228514404	2366.4717056024147	1839.2265912691892	1957.407346103643	2190.1653270595884	2372.749482203074	2321.103836378181	2112.3010780929476	2227.8766249843693	2434.888447164902	0.9046880670924862	0.9719014882829029	0.7553638005103352	0.8039002149699215	0.8994930875004723	0.9744797487399554	0.9532690662197654	0.867514518191762	0.9149809830419253	1.0	11.249639962346073	-7.997416016343995	24.764770267700435	0.934749413040901	0.858638697194368	0.2755681712327325	0.06300908519558586	114.67581995974463	1099021.1369802544	0.021086265212572324	0.02377143271415069	1.0059675777152047e-08	7.997416016343995	-0.07611071584653295	
SWDSS(ph)SPVDRPEPEAAS(ph)PTTR	ddPTM_K562_Methotrexat_30min_R1	1	SWDSSSPVDRPEPEAASPTTR	21	1	C9J0I9;Q86WB0;Q86WB0-2	C9J0I9	ZC3HC1	Nuclear-interacting partner of ALK	2	S(0.042)WDS(0.364)S(0.59)S(0.318)PVDRPEPEAAS(0.669)PT(0.016)T(0.001)R	69.024	0.024203	49714000.0	1930.8	1703.6	2177.5	2149.4	1534.1	1736.7	1662.6	2331.8	2056.7	2715.7	True	False	1845.9243438746419	1985.0909437511823	1720.4725072981594	1960.9654391587853	1735.8610395960493	2072.2926958723046	2035.4803725736383	2249.7892723231776	1961.0844659128409	2223.8604143289604	0.8300540501466865	0.8926328878200632	0.7736423096578676	0.8817844081057118	0.7805620480545481	0.931844769806566	0.9152914272219892	1.0116593909523954	0.8818379306889138	1.0	11.118850521520594	-8.393423041876794	5.593289004714996	0.9492412117280914	0.8349521899118275	0.5814038346520657	0.04950296211617002	0.16770607412363117	6.9398661722256225	0.016590103094857034	0.014533572811751518	4.041819902786284e-09	8.393423041876794	-0.11428902181626388	
SWDSS(ph)SPVDRPEPEAASPTTR	ddPTM_K562_Methotrexat_30min_R1	2	SWDSSSPVDRPEPEAASPTTR	21	1	C9J0I9;Q86WB0;Q86WB0-2	C9J0I9	ZC3HC1	Nuclear-interacting partner of ALK	1	S(0.028)WDS(0.107)S(0.433)S(0.433)PVDRPEPEAASPTTR;S(0.03)WDS(0.118)S(0.426)S(0.426)PVDRPEPEAASPTTR	77.03699999999999	0.0029754	591850000.0	1004.97	709.52	821.42	938.3499999999999	681.89	865.8	576.62	931.6199999999999	935.66	1349.9	True	False	960.7927221171008	826.7561202220822	649.0151673684747	856.0863123823601	771.570487119582	1033.1035965257342	705.9417132403532	898.8543965527574	892.1613708251122	1105.4200292015544	0.8691652916865293	0.7479112901719799	0.587120868288644	0.7744443648272882	0.6979885172488578	0.9345801317458899	0.6386185292392932	0.8131338068860581	0.8070790715358405	1.0	10.110378942880416	-10.915116718905532	0.5385463686557823	1.0195370660862964	0.7421198483288106	0.36446179338991747	0.09651254621925494	3.981416010073786	1.5023849129677787	0.2610251125271816	0.04483437803218926	1.2158591882382321e-11	10.915116718905532	-0.27741721775748573	
SWLSPRVS(ph)PPASPGP	ddPTM_K562_Methotrexat_30min_R1	1	SWLSPRVSPPASPGP	15	1	A0A0C4DGU2;Q9Y4U1	A0A0C4DGU2	MMACHC	Methylmalonic aciduria and homocystinuria type C protein	1	SWLS(0.04)PRVS(0.96)PPASPGP	141.65	1.0036e-05	45004000.0	844.52	780.47	1045.5	1128.2	848.3	796.13	938.72	884.49	912.8	1055.7	True	False	807.3959119996958	909.429401778284	826.0638376028592	1029.2924576435014	959.866318942265	949.9708550497025	1149.2518557333844	853.3819853662955	870.3641272354944	864.5025000578419	0.9339428306403681	1.0519685041019964	0.9555366670976534	1.1906182545159023	1.1103106340097832	1.0988642080111304	1.3293794473196905	0.9871365152896581	1.006780347283276	1.0	9.755726325783213	-7.247811557063698	24.821287129220586	1.112289960927738	0.9876312442952873	0.2347678192775121	0.10045090009995215	1083.2803052574616	1973050.0396895611	0.02771944386636974	0.04765735501422762	5.651821574858043e-08	7.247811557063698	-0.12465871663245065	
SWQQTTFQNRPDS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	SWQQTTFQNRPDSR	14	1	Q9BYW2;H7BZ93;C9JG86;H7BXT4;H7C3H4;Q9BYW2-3;Q9BYW2-2	Q9BYW2	SETD2	Histone-lysine N-methyltransferase SETD2	1	SWQQT(0.01)T(0.01)FQNRPDS(0.98)R	97.2	0.012794	13464000.0	2786.4	2834.0	2647.1	2964.1	2810.4	2342.3	2284.6	3131.8	3056.4	3391.0	True	False	2663.9131923411546	3302.270330236468	2091.5098847618638	2704.2419550621357	3180.0168604919727	2794.916324950596	2796.979705991662	3021.6528188788607	2914.30863111587	2776.8570405381656	0.9593267328680622	1.1892115013585558	0.7531932160096081	0.9738499013755649	1.1451856592068828	1.0065034980731058	1.007246561547726	1.0881557007678193	1.049498979807425	1.0	11.439237190225185	-7.568971747053119	24.996313590228954	1.0504870210500785	0.968453748887834	0.12227701549612446	0.10578059811226802	274.92439292719797	149090.33735599348	0.031291401672846254	0.04039704166007797	2.697914939091498e-08	7.568971747053119	-0.08203327216224454	
SWS(ph)ASDPFYTNDR	ddPTM_K562_Methotrexat_30min_R1	3	SWSASDPFYTNDR	13	0	Q9Y2G3	Q9Y2G3	ATP11B	Probable phospholipid-transporting ATPase IF	1	S(0.202)WS(0.785)AS(0.013)DPFYTNDR;S(0.001)WS(0.997)AS(0.002)DPFYTNDR;S(0.31)WS(0.687)AS(0.003)DPFYTNDR	229.48	5.902499999999999e-35	154096000.0	6422.78	5614.38	6566.64	7335.7	6111.45	5641.3099999999995	5845.55	6642.32	7233.86	7173.2	True	False	6140.442281619626	6542.060866857107	5188.392002445185	6692.590570408998	6915.212796062365	6731.413317297978	7156.563389809832	6408.705840697183	6897.559427523832	5874.063970270832	1.0453482142341244	1.1137197177230393	0.8832712801059208	1.1393458777910495	1.1772450608404812	1.1459550579234867	1.218332559200895	1.0910173728328838	1.1742397533348297	1.0	12.520143261780412	-7.470440579420972	24.969053616727173	1.1451030924359873	1.0219461080259178	0.3349396076151081	0.07708843376379032	350.71063134249084	166994.56283574837	0.02061895428634547	0.030582496669325283	3.3850058266583093e-08	7.470440579420972	-0.1231569844100695	
SWS(ph)PPPEVSR	ddPTM_K562_Methotrexat_30min_R1	2	SWSPPPEVSR	10	0	Q9NR19;Q9NR19-2;F8WCJ4;C9JXD9;C9IYL0;B4DEH9;C9JY31	Q9NR19	ACSS2	Acetyl-coenzyme A synthetase, cytoplasmic	1	S(0.151)WS(0.849)PPPEVSR;S(0.074)WS(0.926)PPPEVSR	160.91	2.7877e-06	167482000.0	7447.799999999999	6942.2	9166.6	8017.5	7415.799999999999	6282.5	6154.4	7273.700000000001	7008.200000000001	7842.099999999999	True	False	7120.403629743916	8089.280552776149	7242.655929000833	7314.618222971785	8391.107683616707	7496.504210178941	7534.68086428919	7017.8798482275915	6682.390311669365	6421.819698497303	1.1087828628091319	1.259655507716766	1.1278198811305158	1.139025784963006	1.3066557576476672	1.167348907652003	1.1732937419672955	1.0928179515643777	1.040575822026432	1.0	12.648766444628388	-9.535918157251416	1.5630174018295695	1.0050227260482865	1.189209921297385	0.5814531048592073	0.056680388060501824	0.27653485494395685	1.2050878821135387	0.050406949807118545	0.016449819136549696	2.911265694083571e-10	9.535918157251416	0.18418719524909855	
SY(ph)DFIMPNS(ph)SVHNNGK	ddPTM_K562_Methotrexat_30min_R1	1	SYDFIMPNSSVHNNGK	16	0	Q9C0D4	Q9C0D4	ZNF518B	Zinc finger protein 518B	2	S(0.242)Y(0.786)DFIMPNS(0.961)S(0.011)VHNNGK	42.52	0.031583	16637000.0	311.43	228.19	276.75	278.84	269.98	284.7	255.68	264.88	215.05	256.75	True	False	297.739910095753	265.89451893318983	218.66395701252156	254.39453012702873	305.48710219030147	339.714245704408	313.02274850212217	255.5640202645868	205.0523724386427	210.25008704163204	1.416122648438176	1.2646583060892598	1.040018389953025	1.2099615924375602	1.452970158009073	1.6157626875899485	1.4888115049395434	1.2155239689103294	0.9752784187815335	1.0	7.71596258751795	-9.619136665250068	3.7802245305748206	0.9888724776068827	1.3485514681169115	0.47932315923927127	0.15161235105093412	0.23785460496027142	6.280653729589995	0.13873574629977212	0.046148169591212956	2.403606306058523e-10	9.619136665250068	0.35967899051002883	
SY(ph)RFSPY(ph)YRTK	ddPTM_K562_Methotrexat_30min_R1	1	SYRFSPYYRTK	11	2	O60293-2;O60293	O60293-2	ZFC3H1	Zinc finger C3H1 domain-containing protein	2	S(0.128)Y(0.683)RFS(0.215)PY(0.917)Y(0.054)RT(0.003)K	52.247	0.033761	6646000.0	1238.5	1201.6	1104.8	1328.7	1200.2	1083.8	1049.3	1080.8	1516.3	1399.5	True	False	1184.057022938028	1400.1439762922157	872.9175779853074	1212.2149339398334	1358.04733702052	1293.2290112203627	1284.6322356198239	1042.787651396728	1445.8075439605384	1146.0369885677283	1.0331752244906298	1.2217266896787164	0.7616835989528098	1.0577450344380348	1.1849943331390673	1.1284356649226386	1.1209343576469608	0.9099075001933078	1.2615714487256222	1.0	10.16243789277267	-5.899596711070416	14.494260533967244	1.069399672161073	0.00015837473780250849	0.006276927844863112	0.14307892579124376	4176955.0544957304	7773889.83840099	0.03492742853647071	142150959.55138052	1.2600950018022499e-06	5.899596711070416	-1.0692412974232706	
SY(ph)SGDVT(ph)AVEQPIVPRPAPR	ddPTM_K562_Methotrexat_30min_R1	1	SYSGDVTAVEQPIVPRPAPR	20	1	G3V2N3;P54821-2;P54821	G3V2N3	PRRX1	Paired mesoderm homeobox protein 1	2	S(0.209)Y(0.5)S(0.293)GDVT(0.997)AVEQPIVPRPAPR	62.055	0.02277	0.0	164.87	0.0	193.54	140.89	137.89	71.92399999999999	74.672	174.94	0.0	146.26	True	False	157.62251220976395	0.0	152.91859888059054	128.53839244583656	156.02495192614518	85.82229507567207	91.41909682474359	168.7872610430641	0.0	119.77089671162261	1.3160334984322466	0.0	1.2767592385049853	1.0732022216993484	1.3026950303445834	0.7165538326252161	0.763283062369126	1.4092510424252749	0.0	1.0	6.904133578112931	-11.988375671602748	4.324902780195791	1.0000045020690498	0.8857375947445634	0.005335787617572141	0.49333515401214934	186499667.4861924	6267.429599110389	8945.275922383233	0.11242966870504005	1.0271274322496343e-12	11.988375671602748	-0.11426690732448641	
SY(ph)TEKR	ddPTM_K562_Methotrexat_30min_R1	2	SYTEKR	6	1	A0A087WWW8;Q9Y6J0-2;Q9Y6J0	A0A087WWW8	CABIN1	Calcineurin-binding protein cabin-1	1	S(0.026)Y(0.78)T(0.194)EKR;S(0.248)Y(0.504)T(0.248)EKR	80.462	0.016163999999999998	16122800.0	9763.400000000001	9057.599999999999	10077.2	10025.8	8077.1	7994.1	8363.3	9463.2	10024.9	10649.8	True	False	9334.21262636507	10554.214447124148	7962.133433086116	9146.85368005869	9139.38022483623	9538.846686285942	10238.982918287686	9130.37389220718	9558.844587119971	8721.018021328035	1.070312273582902	1.2102044074800518	0.9129821098424522	1.048828664003358	1.047971716430932	1.093776742916691	1.1740582227037406	1.0469390006852446	1.0960698124625996	1.0	13.090280838081304	-8.269837146129195	22.442329415604117	1.090845540591702	1.0579395950118036	0.01715681529986368	0.07853255972259628	663.5745223079404	1773334.145781477	0.02777985840344011	0.02497296134862128	5.37233212943888e-09	8.269837146129195	-0.032905945579898344	
SYELPDGQVITIGNER	ddPTM_K562_Methotrexat_30min_R1	3	SYELPDGQVITIGNER	16	0	P60709;P63261;A0A2R8Y793;A5A3E0;P68133;P62736;Q6S8J3;P68032;P63267;Q9BYX7;A0A2R8YEA7;P63267-2;Q562R1	P60709	ACTB;ACTG1;POTEF;ACTA1;ACTA2;POTEE;ACTC1;ACTG2;POTEKP;ACTBL2	Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;POTE ankyrin domain family member F;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;POTE ankyrin domain family member E;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Beta-actin-like protein 2	0	;;	203.74	6.947e-15	187369000.0	5687.6	5183.23	6328.6	6590.6	4985.13	5021.5	5595.9	6589.4	6744.1	6283.0	False	True	5437.579914139946	6039.670657654051	5000.313345436113	6012.812330566612	5640.761974005248	5991.833806830649	6850.923022305319	6357.647067092523	6430.568263024651	5145.087816485199	1.0568488057128165	1.1738712482812343	0.9718616132099399	1.168651060007405	1.0963392997748018	1.1645736711494836	1.3315463732911441	1.2356731884579704	1.2498461624737849	1.0	12.32897998594586	-8.466162269626022	4.435858192064554	1.2269401608930688	1.0967456240567879	0.21565885266617013	0.0957670246091045	0.2740995662660812	11.099627547749037	0.03352289655082028	0.028458301013427684	3.4185168931241767e-09	8.466162269626022	-0.1301945368362809	
SYESSEDCSEAAGS(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	1	SYESSEDCSEAAGSPAR	17	0	Q6P6C2-3;Q6P6C2;K7ER58	Q6P6C2-3	ALKBH5	RNA demethylase ALKBH5	1	SYESSEDCSEAAGS(1)PAR	186.17	1.1444000000000001e-08	23489000.0	658.73	552.8	833.01	534.85	579.2	596.24	578.68	673.12	519.42	818.04	True	False	629.7730179410313	644.140804006606	658.1725847551967	487.9605309081958	655.3749521765417	711.4549415482837	708.4637206790045	649.4459880719519	495.2722775730283	669.885029030328	0.9401210515969289	0.9615691888785941	0.9825157396156691	0.7284242963520596	0.9783394519582114	1.0620552941422337	1.057590019147793	0.9694887330323503	0.7393392240605001	1.0	9.387769699851447	-6.028473911982117	16.19703811418133	0.9446490753378871	0.9385648976038479	0.0	0.1104450617149226	57080975.545469426	2859567131.809976	0.02852840956600271	3621025.499830521	9.365394760196079e-07	6.028473911982117	-0.006084177734039242	
SYGEEDFEYHR	ddPTM_K562_Methotrexat_30min_R1	1	SYGEEDFEYHR	11	0	P04920-2;P04920-3;P04920;C9J9M9;C9J722;C9J035;C9JVC2	P04920-2	SLC4A2	Anion exchange protein 2	0		169.82	0.00054477	8500000.0	3273.8	3112.5	3502.2	3203.1	2895.6	2702.2	2846.0	3809.1	3739.3	3787.6	False	True	3129.8876719374375	3626.787721545874	2767.1360803947728	2922.2891961335736	3276.422153871534	3224.3619063661795	3484.2879467969296	3675.131793981567	3565.4607591714316	3101.6289374055923	1.009110933352164	1.1693170894193292	0.8921557466217698	0.942178853469806	1.0563552958762858	1.0395704874559395	1.1233735618005352	1.184903761265424	1.14954458806211	1.0	11.598810384902764	-8.650526343059468	2.490534537348397	1.1315591845794128	1.0126085377804395	0.24580241701609196	0.08153557389675667	0.3811325146851692	4.80837823093451	0.037173340937391115	0.02669890289419315	2.2360095646726363e-09	8.650526343059468	-0.11895064679897338	
SYGSLVQSACS(ph)PVRER	ddPTM_K562_Methotrexat_30min_R1	1	SYGSLVQSACSPVRER	16	1	Q96S90	Q96S90	LYSMD1	LysM and putative peptidoglycan-binding domain-containing protein 1	1	SYGSLVQSACS(1)PVRER	111.78	0.0060145	0.0	1679.0	1514.5	1960.4	1732.4	1866.6	1572.8	1463.3	1813.3	1858.6	1938.4	True	False	1605.1931703778341	1764.7453829015997	1548.93883045112	1580.5231817245178	2112.0906176324797	1876.7213405124453	1791.4822742614003	1749.5252112117764	1772.194091673849	1587.3369765199595	1.011249151328297	1.111764804200924	0.9758097073042281	0.9957074049831687	1.3305874233856618	1.1823080847186747	1.1286086702201092	1.1021763098138082	1.1164573861053535	1.0	10.63239271576374														
SYLEGS(ph)SDNQLKDSESTPVDDR	ddPTM_K562_Methotrexat_30min_R1	1	SYLEGSSDNQLKDSESTPVDDR	22	1	E9PJ60;Q9UHI6	E9PJ60	DDX20	Probable ATP-dependent RNA helicase DDX20	1	S(0.003)Y(0.002)LEGS(0.778)S(0.216)DNQLKDS(0.001)ESTPVDDR	58.913999999999994	0.014197999999999999	12884000.0	852.09	934.96	1514.3	784.04	993.63	841.58	789.47	892.38	1022.5	1221.8	True	False	814.633143863758	1089.4462483972795	1196.4691241339174	715.3044305006297	1124.3097612762026	1004.2034243059913	966.5287439767291	860.994489594201	974.9641981795497	1000.5201805159337	0.8142096078898478	1.0888798343232715	1.195847067789217	0.7149325365249224	1.1237252213108135	1.0036813288345252	0.9660262359509066	0.8605468498898402	0.974457304476152	1.0	9.966534551392638	-9.002145442177538	14.677341572408334	0.9331591778255097	0.9965410573494382	0.018241665853875322	0.13728438696226772	1.6849915584825528	11384.038362452948	0.05826877391165348	0.0378330260715481	9.950721188679344e-10	9.002145442177538	0.06338187952392849	
SYLMTNY(ph)ESAPPS(ph)PQYK	ddPTM_K562_Methotrexat_30min_R1	1	SYLMTNYESAPPSPQYK	17	0	M0QZK8;H7BZK5;B8ZZK2;O75223	M0QZK8	GGCT	Gamma-glutamylcyclotransferase	2	S(0.001)Y(0.003)LMT(0.003)NY(0.966)ES(0.03)APPS(0.997)PQYK	72.209	0.019461000000000003	0.0	17171.0	14982.0	18632.0	18042.0	15875.0	15834.0	15153.0	18559.0	17838.0	19211.0	True	False	16416.18339997487	17457.520849542267	14721.397821345268	16460.285872012097	17962.840755874637	18893.6964049301	18551.445979555116	17906.269450658663	17008.71527347365	15731.70174160387	1.0435097022314392	1.1097032689969144	0.9357791078897227	1.0463131161761998	1.1418243907059542	1.200995080841385	1.17923961973511	1.1382283839836576	1.0811745323452582	1.0	13.941387119049446	-7.723926378463754	5.608878047307485	1.1372987040975904	1.0309733348236119	0.29686003521702675	0.06584576140246444	0.20596317292805255	16.28460175826388	0.019774714840605456	0.02507777525713857	1.8883114282392666e-08	7.723926378463754	-0.10632536927397851	
SYNPFDDDGEDEGARPAPWR	ddPTM_K562_Methotrexat_30min_R1	1	SYNPFDDDGEDEGARPAPWR	20	1	O95721	O95721	SNAP29	Synaptosomal-associated protein 29	0		211.09	4.2122000000000006e-27	87684000.0	300.68	299.59	363.3	300.56	392.87	258.14	340.2	335.35	394.87	507.49	False	True	287.4624672240662	349.0921553407002	287.04829478825314	274.210371449504	444.5392911975099	308.02190160216327	416.49851001416556	323.5555504218107	376.5125798876858	415.5786433213549	0.6917161693551702	0.8400146661789772	0.6907195530889855	0.659827870984855	1.0696875268774593	0.7411879954667904	1.0022134599734456	0.7785663571061197	0.9059959791931356	1.0	8.698977705503726	-7.738117650392749	24.999340709948097	0.9007461729732439	0.726969200052936	0.4532370928710091	0.10437746680571447	233.39493010773	250182.815416262	0.02916235710311758	0.03762507396842222	1.8276050507932823e-08	7.738117650392749	-0.17377697292030791	
SYPATIT(ph)T(ph)IWDGMK	ddPTM_K562_Methotrexat_30min_R1	1	SYPATITTIWDGMK	14	0	Q9HD43-3;Q9HD43-2;Q9HD43	Q9HD43-3	PTPRH	Receptor-type tyrosine-protein phosphatase H	2	SYPAT(0.001)IT(1)T(1)IWDGMK	85.271	0.012136	0.0	1293.3	1122.1	1197.9	1481.1	1253.3	957.39	1445.7	1401.4	1157.3	1292.1	True	False	1236.4480805536948	1307.507952561165	946.4771602720851	1351.2542625560975	1418.1309177535543	1142.3920677728952	1769.935026241856	1352.111967678918	1103.4973756021445	1058.0881692950063	1.1685680989869947	1.2357268425299044	0.8945163434751506	1.2770715161255652	1.3402766980169913	1.079675683864852	1.6727670506146441	1.2778821339433526	1.0429162782695074	1.0	10.047244135275408														
SYQNS(ph)PS(ph)SDDGIRPLPEYSTEK	ddPTM_K562_Methotrexat_30min_R1	1	SYQNSPSSDDGIRPLPEYSTEK	22	1	Q15648	Q15648	MED1	Mediator of RNA polymerase II transcription subunit 1	2	S(0.059)Y(0.017)QNS(0.832)PS(0.532)S(0.528)DDGIRPLPEY(0.012)S(0.009)T(0.011)EK	64.52199999999999	0.026573000000000003	16032000.0	5515.6	3972.6	7184.4	5490.1	3735.8	4149.2	3417.5	5162.1	4848.0	6586.0	True	False	5273.140828192962	4629.00462734559	5676.492620635087	5008.79145693014	4227.123180837572	4950.97417729796	4183.961369704325	4980.54601709387	4622.617538165731	5393.211580355167	0.9777366879876243	0.8583020633210072	1.052525482462393	0.9287214829795883	0.783785897856282	0.9180011025957034	0.7757829091935593	0.9234842621853674	0.8571177802487236	1.0	12.396928917795103	-7.535005719427911	24.969581492710823	0.8683768749058105	0.9587701525476585	0.20599496818047103	0.07610762548536629	308.20648758327866	634597.4990531796	0.02109997344477825	0.027258975436059277	2.917388593288229e-08	7.535005719427911	0.09039327764184801	
SYS(ph)PDGK	ddPTM_K562_Methotrexat_30min_R1	2	SYSPDGK	7	0	D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2	D6REM6	MATR3	Matrin-3	1	S(0.003)YS(0.997)PDGK;S(0.009)YS(0.991)PDGK	96.948	0.0090003	75595000.0	8305.7	6885.4	13593.4	9505.7	7802.3	6404.400000000001	5568.2	9009.1	8647.5	9894.1	True	False	7940.591372964371	8023.095318211079	10740.33110480221	8672.350039551347	8828.43920816131	7641.959659955432	6817.010592183649	8692.244846593512	8245.47961247693	8102.182614210756	0.9800558381684753	0.9902387665440961	1.325609606226882	1.070372077807843	1.0896371543979695	0.9431976572031195	0.8413795290452983	1.0728275651733425	1.0176862217367009	1.0	12.984094886799152	-8.248543684839282	19.64501708515338	0.9712175441806009	1.097442488141256	0.23477776070747314	0.1044421462115219	68.62164813076747	104534.97984359748	0.036536438785486756	0.03613565290567683	5.642301836711682e-09	8.248543684839282	0.12622494396065498	
SYS(ph)SPDITQAIQEEEK	ddPTM_K562_Methotrexat_30min_R1	1	SYSSPDITQAIQEEEK	16	0	P40818;P40818-2	P40818	USP8	Ubiquitin carboxyl-terminal hydrolase 8	1	S(0.001)YS(0.801)S(0.198)PDITQAIQEEEK	146.86	1.7547999999999997e-21	0.0	491.48	430.46	626.01	370.42	456.55	336.78	368.87	462.2	542.48	708.51	True	False	469.87512768153556	501.5861984310485	494.6190559328223	337.9458537141515	516.5943273760355	401.8579686277853	451.5984873278229	445.944164022546	517.2602232063003	580.1919733977284	0.8098614755558341	0.8645176448988985	0.85250930487064	0.5824724732661644	0.8903851674313048	0.6926293141809926	0.7783604531499557	0.7686148455501746	0.8915328838093257	1.0	9.180386526642257	-9.984284553210356	2.986823779899572	0.9993237107265163	0.7791736108524716	0.40610015597322724	0.08517386168974463	0.22821544891535814	4.792632190722821	0.08019387723346126	0.021505256227935535	1.0368488415756944e-10	9.984284553210356	-0.22015009987404466	
SYS(ph)SPDITQAIQEEEKR	ddPTM_K562_Methotrexat_30min_R1	3	SYSSPDITQAIQEEEKR	17	1	P40818;P40818-2	P40818	USP8	Ubiquitin carboxyl-terminal hydrolase 8	1	S(0.041)YS(0.919)S(0.041)PDITQAIQEEEKR;S(0.26)YS(0.723)S(0.018)PDITQAIQEEEKR;S(0.371)YS(0.626)S(0.002)PDITQAIQEEEKR	120.74	0.00017584	217366000.0	4271.75	3656.29	7001.9	4594.43	3648.0899999999997	3430.35	3138.42	4131.95	4107.55	5201.11	True	False	4083.9689848490284	4260.4297761962935	5532.296876625024	4191.643455212752	4127.877778462911	4093.216588521658	3842.2905755398524	3986.6269764884464	3916.5908970488135	4259.138579213646	0.9588720603693156	1.0003031591855096	1.29892389593166	0.9841528697069641	0.9691813735783705	0.9610432984026968	0.9021285652201635	0.9360172021508836	0.9195734828078601	1.0	12.056345956154411	-7.505343026929245	24.9605322053219	0.9461979357249177	1.0881397730114968	0.33650460062459464	0.08674863820864645	826.3875578480539	1176289.7856147173	0.025227752121731513	0.036506525752834015	3.1236112122819465e-08	7.505343026929245	0.14194183728657905	
T(ph)AAPSPSLLYK	ddPTM_K562_Methotrexat_30min_R1	1	TAAPSPSLLYK	11	0	Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3	Q9BTC0	DIDO1	Death-inducer obliterator 1	1	T(0.371)AAPS(0.357)PS(0.272)LLYK	94.363	0.029979000000000002	9963700.0	1724.3	1337.0	2409.3	1847.9	1444.8	1011.5	1056.5	1814.3	1382.5	2282.2	True	False	1648.501836618523	1557.916524885731	1903.620855032586	1685.8974760498356	1634.81652435198	1206.958059466136	1293.447018900547	1750.4900406449708	1318.227876756213	1868.871465029845	0.8820841173216785	0.8336135224050049	1.018593782746951	0.9020938612398968	0.8747613492647942	0.6458218673946426	0.6921005767937557	0.936656197817765	0.7053603746553867	1.0	10.867951633231113	-8.018355761492348	23.640647512351855	0.7827309356962271	0.908638689310993	0.18780403235474952	0.11059379259570956	565.9300148488749	728869.1399391055	0.035574216674639766	0.03627059104570902	9.586150400475423e-09	8.018355761492348	0.12590775361476592	
T(ph)ASELLLDRR	ddPTM_K562_Methotrexat_30min_R1	5	TASELLLDRR	10	1	Q92508	Q92508	PIEZO1	Piezo-type mechanosensitive ion channel component 1	1	T(0.97)AS(0.03)ELLLDRR;T(0.967)AS(0.033)ELLLDRR;T(0.826)AS(0.174)ELLLDRR;T(0.992)AS(0.008)ELLLDRR;T(0.991)AS(0.009)ELLLDRR	112.64	0.0024148000000000004	152742700.0	20899.300000000003	16926.8	24716.9	22755.699999999997	17168.6	15246.599999999999	16377.600000000002	19395.1	20017.800000000003	23892.3	True	False	19980.591796115234	19723.66599359445	19529.160466423826	20760.743111503463	19426.571830003737	18192.789668271267	20050.69370255143	18712.963339752667	19087.176847255345	19565.172948879397	1.0212325670885332	1.0081007740196917	0.9981593578268045	1.0611070582277957	0.9929159267215372	0.9298558063251501	1.0248155615562724	0.9564425210370787	0.9755690326442308	1.0	14.256000242734123	-7.991771329356476	24.901806503296765	0.975782141287339	1.0203801554783283	0.36418173864798364	0.02788911942692444	196.6422411981843	595078.3780916891	0.00834691121330443	0.009448292073908798	1.0191278518805847e-08	7.991771329356476	0.0445980141909893	
T(ph)ASLTSAASVDGNR	ddPTM_K562_Methotrexat_30min_R1	1	TASLTSAASVDGNR	14	0	G3V578;H0YJT9;A0A0A0MS87;Q9UN36-4;Q9UN36-5;Q9UN36-2;Q9UN36-3;Q9UN36-6;Q9UN36	G3V578	NDRG2	Protein NDRG2	1	T(0.642)AS(0.049)LT(0.306)S(0.002)AAS(0.001)VDGNR	145.61	4.8304999999999995e-08	35660000.0	945.47	695.96	1013.1	962.87	669.39	617.42	894.63	766.68	741.82	940.61	True	False	903.9082708738131	810.9555607026721	800.4641548306621	878.4566820521167	757.4265180204677	736.7276767924678	1095.273550893513	739.7154298416391	707.3329501159451	770.2564143027439	1.1735160578858073	1.0528384387902439	1.039217772117176	1.1404730499353497	0.9833433437955981	0.9564706805582046	1.4219596624651065	0.9603495876256334	0.918308419094752	1.0	9.589194981118194	-9.126606120107102	0.013088857070863255	2.1820734450170634e-07	2.111877193178895	0.06131570010949072	0.13730626304708823	2498.256374833553	28.414348512741544	2268.479673723648	2310.0427045256442	7.471260512035916e-10	9.126606120107102	2.1118769749715502	
T(ph)ASPPPPPK	ddPTM_K562_Methotrexat_30min_R1	1	TASPPPPPK	9	0	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2;M0R088	A9Z1X7;M0R088	SRRM1	Serine/arginine repetitive matrix protein 1	1	T(0.578)AS(0.422)PPPPPK	98.249	0.021341	63592000.0	4192.5	2879.1	6522.2	4874.9	2927.2	2947.4	2894.8	3716.6	3701.3	4997.2	True	False	4008.2027199577547	3354.8223386675454	5153.2793511366535	4447.52508577052	3312.1781077540927	3516.943336105275	3544.03258903294	3585.885071411066	3529.2273708772323	4092.1586561419444	0.9794837045093108	0.819817270191192	1.2593058539903057	1.0868408239976726	0.8093963079322024	0.8594347462131446	0.8660545415837387	0.8762820244100239	0.8624365933564659	1.0	11.998646365227236	-7.758979513329301	24.999302902224457	0.8711291933140523	1.0368190167458256	0.3244871207166422	0.11093375011084274	79.44247799514346	807356.2607441242	0.03470249167633919	0.04270978966768216	1.7418890403704287e-08	7.758979513329301	0.1656898234317733	
T(ph)ASPPPPPKR	ddPTM_K562_Methotrexat_30min_R1	1	TASPPPPPKR	10	1	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2;M0R088	A9Z1X7;M0R088	SRRM1	Serine/arginine repetitive matrix protein 1	1	T(0.995)AS(0.005)PPPPPKR	107.34	0.0033326999999999996	60118000.0	3724.0	2703.0	6227.8	4455.7	3207.9	2651.5	2426.7	3503.0	3444.2	5097.3	True	False	3560.2974189916968	3149.624806855742	4920.669887922608	4065.075698920533	3629.7950778437944	3163.864848911969	2970.949248240377	3379.7975044806985	3284.0798937603954	4174.129576153113	0.852943674612247	0.7545584652785128	1.1788493380834402	0.9738738639414534	0.8695932916363899	0.7579699650406623	0.7117530000059104	0.8097011467467494	0.7867699921254028	1.0	12.027259670970075	-7.99990099415999	4.433286647216697	0.7958771791637327	0.9428389836045918	0.18432871408200024	0.12279120763547717	0.31292218459476717	15.48168700307134	0.04139570294523449	0.044745307902729604	1.000227995358318e-08	7.99990099415999	0.14696180444085916	
T(ph)ASQEGCQELTQEQR	ddPTM_K562_Methotrexat_30min_R1	1	TASQEGCQELTQEQR	15	0	A0A0C4DG33;O43933-2;O43933	A0A0C4DG33	PEX1	Peroxisome biogenesis factor 1	1	T(0.61)AS(0.39)QEGCQELTQEQR	220.97	5.2771e-27	19310000.0	582.59	570.26	978.83	776.98	627.42	619.06	476.97	421.35	684.86	722.83	True	False	556.9800411735695	664.4857722373494	773.3869595034018	708.8633697392723	709.9367273732828	738.6845835819138	583.9426640842346	406.5308816765464	653.0210080833705	591.9184826340911	0.940974234652984	1.1225967624466247	1.3065768043967128	1.1975692439688077	1.1993825977759636	1.247949853322201	0.9865254781125209	0.6868021418548159	1.1032279397280644	1.0	9.209254695363295	-8.909188622034328	5.4122187696749124	0.9057125396681331	1.1747403128943603	0.40586457034593804	0.1332921412251491	0.18419283002870826	8.602714653795102	0.056672778599761595	0.03772818921243132	1.2325693895380978e-09	8.909188622034328	0.2690277732262272	
T(ph)CSPREHVLLGR	ddPTM_K562_Methotrexat_30min_R1	1	TCSPREHVLLGR	12	1	Q8TER5-2;Q8TER5-4;Q8TER5-3;Q8TER5	Q8TER5-2	ARHGEF40	Rho guanine nucleotide exchange factor 40	1	T(0.999)CS(0.001)PREHVLLGR	73.46600000000001	0.032795	0.0	981.06	1209.0	1329.2	1015.4	947.32	771.46	666.63	1061.0	1013.1	1313.7	True	False	937.9337770880749	1408.7667005137234	1050.21908459275	926.3814585102028	1071.9091845578057	920.5337266987096	816.138747003948	1023.6840286194757	966.0012021278263	1075.7761999867273	0.8718670083049308	1.30953510640141	0.9762430927600996	0.8611284192024626	0.9964053718338728	0.8556925935989911	0.758651053085221	0.9515771297339592	0.8979574024223111	1.0	10.0711622614862	-6.991380212906242	24.999845636718327	0.8986128169927877	1.1037481133292881	0.2804259906703108	0.11899665837666498	207.80067606934918	602670.4277215591	0.029323415225106876	0.06089465006546958	1.0200460703305007e-07	6.991380212906242	0.2051352963365004	
T(ph)DAQGHSLGDGLGPS(ph)T(ph)Y(ph)QR	ddPTM_K562_Methotrexat_30min_R1	1	TDAQGHSLGDGLGPSTYQR	19	0	H0YNM6;O43868	H0YNM6	SLC28A2	Sodium/nucleoside cotransporter 2	4	T(0.953)DAQGHS(0.047)LGDGLGPS(1)T(1)Y(1)QR	60.333999999999996	0.015856	28260000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
T(ph)DRSPFET(ph)DMLTLTRY(ph)VMEK	ddPTM_K562_Methotrexat_30min_R1	1	TDRSPFETDMLTLTRYVMEK	20	2	O00757	O00757	FBP2	Fructose-1,6-bisphosphatase isozyme 2	3	T(0.833)DRS(0.212)PFET(0.924)DMLT(0.035)LT(0.085)RY(0.91)VMEK	52.185	0.021802000000000002	16555000.0	1001.3	539.12	1413.3	809.84	618.18	781.57	711.3	900.77	907.48	1144.9	True	False	957.2840509227668	628.2004165268471	1116.667643887251	738.8425845577136	699.4815054152177	932.597341114135	870.8271316081009	869.0894085387032	865.291452874306	937.5475156921696	1.021051237297585	0.670046484057996	1.1910517869196646	0.7880588153574737	0.7460757921147141	0.9947200813876831	0.9288351971848482	0.9269817198513663	0.9229307724584832	1.0	9.872747999114686														
T(ph)EDLIRMRKK	ddPTM_K562_Methotrexat_30min_R1	1	TEDLIRMRKK	10	3	P11171;A0A2R8Y5Z6;A0A2R8Y420;A0A2R8Y5G2;A0A2R8YD30;A0A2R8YCW8;A0A2R8Y5C8	P11171	EPB41	Protein 4.1	1	T(1)EDLIRMRKK	58.699	0.030463999999999998	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
T(ph)ESPATAAETASEELDNR	ddPTM_K562_Methotrexat_30min_R1	2	TESPATAAETASEELDNR	18	0	C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3	C9JWF0	SMC4	Structural maintenance of chromosomes protein 4	1	T(0.99)ES(0.01)PATAAETASEELDNR;T(0.946)ES(0.038)PAT(0.017)AAETASEELDNR	278.72	3.010499999999999e-135	183959000.0	1894.47	1641.79	2101.6	2248.7	1758.94	1695.5900000000001	1457.12	2018.4	1994.5100000000002	2326.15	True	False	1811.191367174327	1913.0678918415433	1660.5028800632888	2051.55996233198	1990.27144057563	2023.2387701929651	1783.9162519454464	1947.4117279599893	1901.7856654387222	1904.8616941456369	0.9508256545558167	1.00430802809523	0.8717183432091917	1.077012556154183	1.044837767850805	1.062144709199175	0.9365069692083674	1.0223375974986135	0.998385169528912	1.0	10.895470536756658	-7.2714435270759115	24.999112476219086	1.0203958870780017	0.9484864072949536	0.35940640612979613	0.047436556256408684	810.881579918822	2026288.1218428973	0.013541073495941584	0.02034119371571854	5.352497497587076e-08	7.2714435270759115	-0.07190947978304807	
T(ph)ESVPSDINNPVDR	ddPTM_K562_Methotrexat_30min_R1	1	TESVPSDINNPVDR	14	0	A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87	A0A2R8Y4X0	KSR1	Kinase suppressor of Ras 1	1	T(0.708)ES(0.287)VPS(0.004)DINNPVDR	188.39	2.1669000000000002e-05	47414000.0	1750.8	1090.8	1938.6	1788.3	1284.4	1539.8	1357.3	1642.2	1544.1	1672.0	True	False	1673.836928348728	1271.0361595701975	1531.7143525364932	1631.5225155148664	1453.32111287215	1837.3445575540843	1661.709075961867	1584.4428951921782	1472.3151280284035	1369.18459798874	1.2225063960020484	0.9283161389905222	1.118705508947808	1.191601569219729	1.0614500886198999	1.341926107153883	1.2136486770321766	1.1572164173623054	1.0753225899496364	1.0	10.419101253280639	-5.92863882253084	21.84028872434684	1.132350943453513	4.4849747577204715	0.06221304775231551	0.1105768217306486	3192.818946491354	1014864.7886107283	0.027300430023117175	20205.197681082216	1.1785857272843996e-06	5.92863882253084	3.352623814266958	
T(ph)FQDVATEISPEK	ddPTM_K562_Methotrexat_30min_R1	1	TFQDVATEISPEK	13	0	F8W6J8;Q8IW40	F8W6J8	CCDC103	Coiled-coil domain-containing protein 103	1	T(0.993)FQDVAT(0.007)EISPEK	94.781	0.024832	57892000.0	987.47	1018.3	1218.1	1138.1	1111.2	1032.1	995.42	1244.2	1188.2	1138.3	True	False	944.0620011631923	1186.556766859491	962.437456321419	1038.3245400142425	1257.3422770348284	1231.5387179189302	1218.6682740690799	1200.440780780726	1132.9608413466417	932.1428396474768	1.0127868401802274	1.27293448642295	1.0324999725207342	1.1139114048303178	1.3488729661972594	1.32119098654953	1.3073836135778965	1.2878292142808454	1.2154369407322931	1.0	9.864407237209075	-7.741059838034332	24.79841848674213	1.2679272385288543	1.114416526367688	0.2529639755804066	0.11315895550062033	269.72833649617127	328211.7443661087	0.03162031276558394	0.04076974144352865	1.8152655343250066e-08	7.741059838034332	-0.1535107121611663	
T(ph)FS(ph)FRS(ph)LGSAARS(ph)GAESEAR	ddPTM_K562_Methotrexat_30min_R1	1	TFSFRSLGSAARSGAESEAR	20	2	J3KQ26	J3KQ26	ARMC5		4	T(0.997)FS(0.997)FRS(0.987)LGS(0.027)AARS(0.83)GAES(0.162)EAR	41.86	0.032925	0.0	0.0	124.52	238.6	137.62	54.405	58.331	62.606	0.0	0.0	145.24	True	False	0.0	145.09481352189312	188.5211206619247	125.55506826883403	61.56021110698331	69.60264020436888	76.64698917679854	0.0	0.0	118.93562859562475	0.0	1.2199440591112383	1.5850685188951006	1.0556556496263627	0.5175926829821952	0.5852126988878531	0.6444409474422044	0.0	0.0	1.0	6.894037146225238	-7.828953782953419	4.210287380874606	0.4116962560089217	1.0292730479326886	0.21521869968663498	0.46661024227268555	0.3053004280944475	10.60860214878183	0.1526274684373353	0.17877433691224195	1.4826758611623663e-08	7.828953782953419	0.6175767919237669	
T(ph)FSLTEVR	ddPTM_K562_Methotrexat_30min_R1	2	TFSLTEVR	8	0	O95239;O95239-2	O95239	KIF4A	Chromosome-associated kinesin KIF4A	1	T(0.5)FS(0.5)LTEVR;T(0.994)FS(0.006)LT(0.001)EVR	154.01	3.6626e-12	222620000.0	8093.3	7247.0	9030.0	8059.5	6414.9	5995.7	6053.5	6993.8	6978.200000000001	8453.7	True	False	7737.528222643793	8444.443572061993	7134.7264022513855	7352.936148180993	7258.571789912455	7154.284169195362	7411.151470813498	6747.824089876424	6653.785005121303	6922.653011972137	1.117711404755142	1.2198276524127454	1.0306346988520854	1.0621558144637204	1.0485245724954544	1.0334598826234158	1.0705652093202627	0.9747453870946065	0.9611611319553572	1.0	12.757109321614532	-6.465004438987247	0.37028563168961975	0.9825729830555872	1.2839355019330483	0.5935802330757063	0.0453789501234536	3.6389928832321083	0.4449278452900597	0.042035618582868264	0.4853698105711627	3.427642830848117e-07	6.465004438987247	0.3013625188774611	
T(ph)FSSEMEY(ph)NDFAICSKGEKDTSDK	ddPTM_K562_Methotrexat_30min_R1	1	TFSSEMEYNDFAICSKGEKDTSDK	24	2	Q8N6M6-3;Q8N6M6-4;Q8N6M6-2;Q8N6M6	Q8N6M6-3	AOPEP	Aminopeptidase O	2	T(0.638)FS(0.181)S(0.181)EMEY(0.98)NDFAICS(0.009)KGEKDT(0.006)S(0.006)DK	41.256	0.024743	10901000.0	907.64	910.47	924.96	753.03	962.85	1040.6	1109.3	1016.9	972.1	858.06	True	False	867.7412323774495	1060.9096921561045	730.8235363262943	687.0130290544981	1089.4816517665445	1241.6812226203274	1358.0887629591823	981.1350506155928	926.9072831788169	702.657019228599	1.2349428079862999	1.5098542576587473	1.0400857265022663	0.977735951188141	1.5505169975568092	1.767122776320498	1.9327904308849555	1.3963214253416505	1.31914612366131	1.0	9.456676842937018	-7.789098061013896	24.12827840953102	1.5496966779394663	1.2026997902586818	0.21350201446060502	0.27300461055633474	204.4013645251983	178309.73733685233	0.08768625410427337	0.09945394996398028	1.6251817583074578e-08	7.789098061013896	-0.3469968876807845	
T(ph)GAFS(ph)ERQGSTIGVDFT(ph)MK	ddPTM_K562_Methotrexat_30min_R1	1	TGAFSERQGSTIGVDFTMK	19	1	C9JFM7;Q86YS6-2;Q86YS6	C9JFM7	RAB43	Ras-related protein Rab-43	3	T(0.999)GAFS(0.999)ERQGS(0.001)T(0.001)IGVDFT(1)MK	66.372	0.026680000000000002	1999300000.0	4105.2	4410.7	5332.2	5252.1	4690.9	4311.6	4627.6	4951.3	5259.2	5426.0	True	False	3924.740323427688	5139.49320591884	4213.044088824456	4791.656547411303	5307.835571762666	5144.755678886992	5665.457098593627	4777.1599725764445	5014.700939917738	4443.298820984988	0.8832942553608523	1.1566841243370438	0.9481793276938575	1.0784006974235172	1.1945709225529937	1.1578684860422026	1.275056512480453	1.0751381271083285	1.128598625020246	1.0	12.117415453481621	-7.530147392490144	5.968942409301355	1.1494362728964442	1.0118206299151202	0.30906506586559623	0.09368131999383977	0.18346953157441542	25.410220018653284	0.026309828476669003	0.0356821544873864	2.9502078041530383e-08	7.530147392490144	-0.137615642981324	
T(ph)GAY(ph)LQFLSVLS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TGAYLQFLSVLSR	13	0	Q4ZG55-4;Q4ZG55	Q4ZG55-4	GREB1	Protein GREB1	3	T(1)GAY(0.999)LQFLS(0.119)VLS(0.881)R	56.339	0.03295	0.0	647.61	667.81	874.64	760.92	741.29	705.15	698.7	742.76	565.53	1046.1	True	False	619.1418398263191	778.1542516708599	691.0650166628069	694.2113250045139	838.782628278571	841.410257669348	855.4012608668362	716.6367097996239	539.2386337373895	856.6411530837443	0.7227551905456876	0.9083783202215461	0.806714706823394	0.8103875496822514	0.9791528521121289	0.9822202151279238	0.9985526118930375	0.8365658213125401	0.6294801875864048	1.0	9.742547175810254	-6.255691459909834	23.703377364052344	0.8833734555194946	0.7227550497787151	0.15759929200884937	0.11148715753366532	624.2849358938644	2574273.029059474	0.028899212555813358	0.24323127466228106	5.55019881145077e-07	6.255691459909834	-0.16061840574077957	
T(ph)GSTS(ph)S(ph)SS(ph)S(ph)GKK	ddPTM_K562_Methotrexat_30min_R1	1	TGSTSSSSSGKK	12	1	A0A3B3IU69;H0YJS9;G3V500;G3V3N9;F8W717;O00423;O00423-3	A0A3B3IU69	EML1	Echinoderm microtubule-associated protein-like 1	5	T(0.999)GS(0.142)T(0.142)S(0.848)S(0.828)S(0.409)S(0.834)S(0.799)GKK	62.104	0.02231	5531600.0	0.0	108.96	0.0	66.602	122.34	0.0	0.0	122.07	0.0	0.0	True	False	0.0	126.96378799667107	0.0	60.76310606627585	138.42985436684745	0.0	0.0	117.77672891006532	0.0	0.0											0.0														
T(ph)GT(ph)QY(ph)LLRMANR	ddPTM_K562_Methotrexat_30min_R1	1	TGTQYLLRMANR	12	1	A0A2R8Y6A7;A0A2R8YD12;A0A024QZX5;A0A087X1N8;P35237	A0A2R8Y6A7	SERPINB6	Serpin B6	3	T(1)GT(1)QY(1)LLRMANR	60.657	0.026092	1907900.0	0.0	0.0	59.983000000000004	146.21	126.73	0.0	119.25	0.0	72.786	0.0	True	False	0.0	0.0	47.39338801619544	133.39199630566947	143.39721631445627	0.0	145.99484808697608	0.0	69.40219474689165	0.0											0.0														
T(ph)HNVHVEIEQRWHQVET(ph)T(ph)PLR	ddPTM_K562_Methotrexat_30min_R1	1	THNVHVEIEQRWHQVETTPLR	21	1	A0A494BZV2;Q6WCQ1;Q6WCQ1-2;J3KSW8;H0Y2S9;Q6WCQ1-3	A0A494BZV2	MPRIP	Myosin phosphatase Rho-interacting protein	3	T(1)HNVHVEIEQRWHQVET(1)T(1)PLR	55.688	0.020649	0.0	639.94	621.78	812.5	1103.1	770.01	789.0	469.07	484.55	468.23	707.58	True	False	611.80900384252	724.5185765470828	641.9673534694629	1006.3929356732365	871.2798116806952	941.4630834590021	574.2708879845526	467.50810185444567	446.4620894998638	579.4304054096128	1.055880047250917	1.2503979248981658	1.1079283162844056	1.736865939856563	1.503683278520338	1.624807871091024	0.9910955355865164	0.8068408172746014	0.7705189188065638	1.0	9.178491581291437	-8.922411633736967	5.8696896233278135	0.851871858862102	1.3820838377824374	0.575293793810727	0.2074251094596063	0.1565359154902378	8.981279113269196	0.09600692232948844	0.06403919684992915	1.1956067720403043e-09	8.922411633736967	0.5302119789203353	
T(ph)HSTSSSLGSGESPFSR	ddPTM_K562_Methotrexat_30min_R1	1	THSTSSSLGSGESPFSR	17	0	F8WBF9;Q5TH30;Q9UGV2-3;Q9UGV2-2;Q9UGV2	F8WBF9	NDRG3	Protein NDRG3	1	T(0.858)HS(0.133)T(0.009)SSSLGSGESPFSR	117.07	0.0012552	11439000.0	429.79	321.0	560.06	436.57	387.03	235.64	413.16	469.12	664.03	527.25	True	False	410.8969462160154	374.0397939329239	442.51105967274714	398.29658591865206	437.93122883440384	281.1740950396442	505.82164725882626	452.6207837002529	633.1593902368379	431.75991584304023	0.9516792345433723	0.8663143108192108	1.0249007456116312	0.9224955149922873	1.014293390296118	0.6512278808713239	1.1715345234658376	1.0483158975433846	1.4664617232948818	1.0	8.754085500993448	-8.931175943692077	24.999170348883048	1.1764201279251316	0.914311264683682	0.4280481386408471	0.15062047098472758	46.920417376594315	17042.365877495697	0.059995416427914935	0.04044889721420829	1.171720575703721e-09	8.931175943692077	-0.26210886324144966	
T(ph)IAHSPTSFTESSSK	ddPTM_K562_Methotrexat_30min_R1	1	TIAHSPTSFTESSSK	15	0	Q03164-2;Q03164;Q03164-3	Q03164-2	KMT2A	Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180	1	T(0.615)IAHS(0.274)PT(0.109)S(0.002)FTESSSK	175.6	0.00016681	46861000.0	3207.7	2240.0	4299.9	3057.9	1765.3	1690.5	2124.8	2518.7	2708.0	3458.7	True	False	3066.6933487915303	2610.121926510126	3397.409751610267	2789.8186546960314	1997.4678920532594	2017.1651997306003	2601.3404881778333	2430.1158933872493	2582.1056710711205	2832.2959145117547	1.0827588081735386	0.9215569295343462	1.1995249981483411	0.9850025346581607	0.7052468923952788	0.7122014297289022	0.9184564631292297	0.8580021179764915	0.9116652175506303	1.0	11.467756288817508	-7.541523612253964	15.313212267291176	0.8407012315738923	1.0598007775849272	0.46632217210590954	0.105251392111943	2.4354573589360924	1998.947670743399	0.03131194966889084	0.04051542733154717	2.8739313359507233e-08	7.541523612253964	0.21909954601103487	
T(ph)IAS(ph)T(ph)PATLRGEKS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TIASTPATLRGEKSR	15	2	A0A494C071	A0A494C071			4	T(1)IAS(0.983)T(0.802)PAT(0.281)LRGEKS(0.934)R	57.703	0.031224000000000002	0.0	633.82	676.44	957.18	800.01	957.95	914.29	767.17	916.56	793.93	843.84	True	False	605.9580317146391	788.2102124859414	756.2809986386467	729.8743653956544	1083.9372158796925	1090.96360275758	939.2274013156009	884.3240652888468	757.0203675899166	691.0123990232164	0.8769133991968794	1.1406600136265563	1.0944535868063887	1.0562391737505312	1.5686219486247956	1.5787901986993524	1.3592048458801171	1.2797513713775426	1.0955235660894163	1.0	9.43256778728959	-7.705130769373766	16.476125772869754	1.3431649235626382	1.0528088263455553	0.3416660077194218	0.18169207763456563	4.09612981637359	1197.2262543395461	0.05545420420255434	0.07158855978616362	1.971828914024245e-08	7.705130769373766	-0.2903560972170829	
T(ph)INLRNPVLQQVLEGRNEVLCVLT(ph)QK	ddPTM_K562_Methotrexat_30min_R1	1	TINLRNPVLQQVLEGRNEVLCVLTQK	26	2	C9JSR4;O60443	C9JSR4	DFNA5	Non-syndromic hearing impairment protein 5	2	T(1)INLRNPVLQQVLEGRNEVLCVLT(1)QK	45.784	0.027586000000000003	0.0	2470.4	1686.4	3767.2	2855.0	1835.6	1732.8	1440.6	2026.4	2034.1	3471.9	True	False	2361.804173973438	1965.0489361011935	2976.5162018340448	2604.7065826734574	2077.013574266676	2067.6390760681356	1763.691221418011	1955.130363425547	1939.5351349799732	2843.105266601138	0.8307128834511698	0.6911629193562576	1.0469243741342003	0.916148484993424	0.7305440282728942	0.7272467538776526	0.6203397539080431	0.6876742786815127	0.6821889986854548	1.0	11.473251800769308	-7.803817748975562	8.625189203716571	0.7186073315348671	0.8708423679727105	0.19117967836162952	0.12580947455377603	0.39812323617812373	74.0704598542569	0.038827260491483384	0.04431732464388758	1.571021943009971e-08	7.803817748975562	0.15223503643784342	
T(ph)KFASDDEHDEHDENGATGPVKR	ddPTM_K562_Methotrexat_30min_R1	2	TKFASDDEHDEHDENGATGPVKR	23	2	P05455	P05455	SSB	Lupus La protein	1	T(0.761)KFAS(0.239)DDEHDEHDENGATGPVKR;T(0.5)KFAS(0.5)DDEHDEHDENGATGPVKR	59.011	0.012304	540450000.0	8958.5	5179.4	15155.2	10509.5	4934.8	4453.5	4534.0	5700.4	6836.4	10927.8	True	False	8564.695066605027	6035.207815252916	11974.330628062033	9588.148452051388	5583.812696824579	5314.075845607945	5550.864915944231	5499.9137009825245	6518.577256170834	8948.669527452961	0.9570914469832675	0.674425153006036	1.3381129553758657	1.0714607822578113	0.6239824456243929	0.5938397690634664	0.6203005819932386	0.6146068624067238	0.7284409415470057	1.0	13.12745748560546	-7.763185955991453	24.996049926706423	0.6686129202691119	1.0097006803149204	0.39544813010748714	0.1879033926914913	45.133844870025264	645934.3630162558	0.05784959567156416	0.06904515264912597	1.7250990817780837e-08	7.763185955991453	0.34108776004580854	
T(ph)KMELLILETQAQVCQALAQR	ddPTM_K562_Methotrexat_30min_R1	1	TKMELLILETQAQVCQALAQR	21	1	D6RER6	D6RER6	CPOX		1	T(1)KMELLILETQAQVCQALAQR	55.846000000000004	0.027094	0.0	872.0	1025.0	1227.3	1034.2	713.55	945.5	818.77	1035.3	968.83	1243.8	True	False	833.6679241033188	1194.3638279789636	969.7065020468569	943.5332916990862	807.394332053817	1128.2044935494127	1002.4000148274501	998.8879121863741	923.7893047650792	1018.5357673315758	0.8184964640833523	1.172628263323568	0.9520593514230287	0.9263624528091088	0.7927010105585979	1.1076729259151634	0.9841578931033526	0.9807097052696772	0.9069777757390697	1.0	9.992280928142964	-11.814258500374429	19.28827818614792	0.9999969056607348	0.9659290920316637	0.00930332270303802	0.10970146394358807	0.0	0.0	0.10349537379410534	0.02510131517152226	1.5337038212391725e-12	11.814258500374429	-0.034067813629071186	
T(ph)KNLS(ph)LVSSSS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TKNLSLVSSSSR	12	1	Q8TEC5	Q8TEC5	SH3RF2	Putative E3 ubiquitin-protein ligase SH3RF2	3	T(0.999)KNLS(0.993)LVS(0.006)S(0.002)SS(1)R	91.07600000000001	0.032144	12684000.0	581.32	635.51	652.67	774.81	385.11	529.67	471.01	692.79	690.91	668.03	True	False	555.765868852914	740.5172256769858	515.6834862632788	706.8836102701305	435.7587151807798	632.0212311986437	576.6459823685249	668.4241830228897	658.7897449038953	547.043293656948	1.0159449449378242	1.3536720662942003	0.9426739935261231	1.2921895185747743	0.7965708020434028	1.15534042465565	1.0541139779151387	1.2218853439451174	1.2042735054842364	1.0	9.0955112039124	-12.835586413373484	17.657604784369973	0.9998556876728725	1.1154835252670294	0.044898242383132	0.15937219920423112	0.0008522325567064294	7.935226156282645e-06	0.14522423613289803	0.03517929419784379	1.4602041776557753e-13	12.835586413373484	0.11562783759415696	
T(ph)KPIVKPQTSPEYGQGINPISR	ddPTM_K562_Methotrexat_30min_R1	1	TKPIVKPQTSPEYGQGINPISR	22	2	A0A087X1A5;O95793-2;O95793-3;O95793	A0A087X1A5	STAU1	Double-stranded RNA-binding protein Staufen homolog 1	1	T(0.831)KPIVKPQT(0.156)S(0.013)PEYGQGINPISR	63.674	0.013134999999999999	36369000.0	1220.3	810.3	2281.4	1472.1	893.39	804.75	622.24	1000.1	1129.3	1820.5	True	False	1166.6570731459622	944.1883022549795	1802.5653171756703	1343.043278582696	1010.8864442765887	960.2565480527657	761.7931595273789	964.9259161379235	1076.799089490626	1490.789808994319	0.7825765014673561	0.633347703719497	1.2091344509469608	0.9008937882991754	0.6780878418792846	0.6441260479909982	0.5109997096379949	0.6472581918096548	0.722301080269009	1.0	10.54186114664427	-7.765455209922668	21.308759681510892	0.6705348809466553	0.8871672372591678	0.1873927727772493	0.1780981871941041	23.334221051928143	123817.43094750668	0.05520289761299933	0.06514247121198327	1.71610868837092e-08	7.765455209922668	0.21663235631251254	
T(ph)KT(ph)T(ph)S(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TKTTSR	6	1	Q9UQ35;Q9UQ35-2	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	4	T(1)KT(1)T(1)S(1)R	66.568	0.018977	2718100.0	446.31	289.31	634.11	558.0	411.58	496.8	372.41	474.88	411.8	457.3	True	False	426.69074679650447	337.11356007082304	501.01897662587174	509.0810063508892	465.70998414506334	592.799568900421	455.9324224408452	458.1782012354538	392.6555078829719	374.47853867239854	1.1394264363165074	0.9002213084519026	1.3379110546684048	1.359439737603344	1.2436226273369324	1.583000112642007	1.2175128221158333	1.2235099048927807	1.048539415035677	1.0	8.548739230119356	-9.777490081153845	2.7391579073760233	0.9991175085699463	1.2588586211450916	0.23951164982743767	0.163167452735335	0.412540044577845	5.8301332457866515	0.16465370890875905	0.04645384408302668	1.669205929748741e-10	9.777490081153845	0.2597411125751453	
T(ph)LAIVY(ph)S(ph)VLT(ph)PMVNPIIYSLRNK	ddPTM_K562_Methotrexat_30min_R1	1	TLAIVYSVLTPMVNPIIYSLRNK	23	1	Q8NGY6	Q8NGY6	OR6N2	Olfactory receptor 6N2	4	T(1)LAIVY(0.999)S(0.999)VLT(0.999)PMVNPIIY(0.001)S(0.001)LRNK	42.711000000000006	0.028658999999999997	8888400.0	1427.1	1002.0	1266.4	1263.8	1049.2	1107.3	915.96	1031.5	1547.4	1608.0	True	False	1364.3663927612906	1167.5634689121177	1000.5999463799724	1153.004616176083	1187.1881903032229	1321.270053630105	1121.3873463626549	995.2215603402341	1475.4617117486903	1316.7756181614188	1.0361419014321678	0.8866836937202389	0.7598864473030609	0.8756272521099644	0.9015873121655035	1.0034132128562356	0.8516161226682039	0.755801935131391	1.1205111116872295	1.0	10.362793812378683	-9.77525523858039	24.999995880814346	1.0602556053825027	0.8830362461196033	0.389773905017329	0.08828788108135585	278.64087110660523	504189.3232555043	0.08505722848566243	0.02242310120894577	1.6778176605205128e-10	9.77525523858039	-0.17721935926289945	
T(ph)LDPLVNT(ph)SSLIMR	ddPTM_K562_Methotrexat_30min_R1	1	TLDPLVNTSSLIMR	14	0	J3KNS1;Q9UPW5	J3KNS1	AGTPBP1	Cytosolic carboxypeptidase 1	2	T(0.764)LDPLVNT(0.803)S(0.184)S(0.25)LIMR	76.156	0.028110000000000003	221640000.0	1828.7	1500.6	2144.8	1840.9	1799.2	1696.9	1440.2	1665.4	1709.7	1708.2	True	False	1748.3125376235537	1748.548644161201	1694.6357904262202	1679.5111551816349	2035.8263362500572	2024.801909152829	1763.2015112357467	1606.8269380422946	1630.2164201736687	1398.828427203567	1.249840583465014	1.2500093722407177	1.211467938075872	1.2006555789970526	1.4553795852718898	1.4474983992144494	1.2604844718237584	1.148694798299562	1.165415563817698	1.0	10.450003304775814	-9.759643227174347	1.3414935255427574	1.0183693526499493	1.2982961089380347	0.5240414540296536	0.08832600814916752	0.3647509672507526	1.3303430015026654	0.09390177353902895	0.029550111919208696	1.7392290183135327e-10	9.759643227174347	0.2799267562880854	
T(ph)LEVMRQQLT(ph)ELYR	ddPTM_K562_Methotrexat_30min_R1	1	TLEVMRQQLTELYR	14	1	F8W1N9;Q16621	F8W1N9	NFE2	Transcription factor NF-E2 45 kDa subunit	2	T(1)LEVMRQQLT(0.999)ELY(0.001)R	83.89399999999999	0.013081	0.0	790.43	732.4	855.12	993.31	837.77	980.43	1007.8	1132.5	1197.2	1070.4	True	False	755.6836436341581	853.4166513285784	675.6419979062243	906.2280545132654	947.9514393731715	1169.8842216929152	1233.8248042100997	1092.66933309289	1141.5424333110577	876.5401876119302	0.8621209321764962	0.9736195366622605	0.7708055003695401	1.0338693733851698	1.0814694554459574	1.3346612491096153	1.407607798989303	1.2465707203565737	1.3023275480626928	1.0	9.775676426953854	-7.847490342471705	1.9343202976500078	1.2803558291864134	0.8849684272673897	0.6679454703111909	0.11635731313627758	0.179988631372702	1.384027485180152	0.03957541781437871	0.048502222123155796	1.4207238055429566e-08	7.847490342471705	-0.3953874019190238	
T(ph)LPAT(ph)SRPSAGFLPTHRLEPR	ddPTM_K562_Methotrexat_30min_R1	2	TLPATSRPSAGFLPTHRLEPR	21	2	A0A0C4DH07;Q8N2S1-2;Q8N2S1-3;Q8N2S1	A0A0C4DH07	LTBP4	Latent-transforming growth factor beta-binding protein 4	2	T(0.666)LPAT(0.666)S(0.666)RPS(0.003)AGFLPTHRLEPR;T(0.971)LPAT(0.506)S(0.506)RPS(0.018)AGFLPTHRLEPR	65.175	0.0049958	167370000.0	2396.7	2097.41	2269.3900000000003	2944.2	2638.5	2414.0	2050.2799999999997	2635.2	2700.3	2676.8	True	False	2291.34393772755	2443.971352625713	1793.0760520493102	2686.086557165392	2985.5089974409593	2880.471335196493	2510.1074812223496	2542.5185223544227	2574.763642390452	2192.0055812776654	1.0453184778808742	1.1149475957087585	0.8180070650204142	1.225401331140653	1.3619988119285629	1.3140802924039718	1.1451191103990122	1.159905131661413	1.1746154591858686	1.0	11.098035756350745	-7.303996137072229	24.894596944843794	1.2135193774789652	1.0049766152070576	0.3868417164383402	0.11646272324844507	441.4309735788238	258224.58219479356	0.033305000306652614	0.049399637499569736	4.965967385195847e-08	7.303996137072229	-0.2085427622719076	
T(ph)LSPEFNER	ddPTM_K562_Methotrexat_30min_R1	1	TLSPEFNER	9	0	Q9BSJ8;Q9BSJ8-2	Q9BSJ8	ESYT1	Extended synaptotagmin-1	1	T(0.859)LS(0.141)PEFNER	120.77	0.010988	48530000.0	4092.6	3307.9	5115.3	3842.1	3971.8	3751.8	3142.4	4078.1	4190.8	4769.3	True	False	3912.6942043408735	3854.4742503137677	4041.6684347105734	3505.269058245076	4494.161317428845	4476.7822516115175	3847.163191853363	3934.6709115109165	3995.9706227196666	3905.533554538097	1.001833462624961	0.9869264202928175	1.0348569224336306	0.8975134918946152	1.1507163501915845	1.1462664931939066	0.9850544459880751	1.0074605317214502	1.023156136522367	1.0	11.931303940302994	-6.766592363167526	24.312612424130535	1.0329315913217	0.9943799405078315	0.04011209988402842	0.07020824314475554	314.9800712162936	1486165.1911821086	0.01946688753813457	0.042664392381547823	1.7116211205912045e-07	6.766592363167526	-0.038551650813868577	
T(ph)PADRGPSPAPAPAASPQPGS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TPADRGPSPAPAPAASPQPGSR	22	1	Q8IX07	Q8IX07	ZFPM1	Zinc finger protein ZFPM1	2	T(0.776)PADRGPS(0.224)PAPAPAAS(0.479)PQPGS(0.52)R	69.142	0.011666	57830000.0	2726.6	2070.3	2628.6	2115.1	2225.5	1909.0	2139.8	2397.5	2161.9	2613.9	True	False	2606.7419287386574	2412.3818859169246	2076.8927819444048	1929.6724669045998	2518.1922584062368	2277.887232348841	2619.7046200126733	2313.178566084063	2061.3937408746897	2140.497380791129	1.217820658007628	1.1270193122242023	0.9702851311954345	0.9015065770327603	1.1764519223450352	1.0641859470563484	1.2238765828549758	1.080673392475309	0.9630442715668249	1.0	11.063730354851458	-15.999900161709455	0.010542571898216568	4.682340343435542e-06	1.9674693699704007	0.07991923253246414	0.10280579104250903	46857.56537217067	37.4322828299513	4093.03124485536	2975.3089901254684	1.0002299125853672e-16	15.999900161709455	1.9674646876300572	
T(ph)PELPEPSVK	ddPTM_K562_Methotrexat_30min_R1	4	TPELPEPSVK	10	0	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2;M0R088	A9Z1X7;M0R088	SRRM1	Serine/arginine repetitive matrix protein 1	1	T(1)PELPEPSVK;T(1)PELPEPSVK;T(1)PELPEPSVK;T(1)PELPEPSVK	143.97	1.5147e-06	107641000.0	12755.5	10520.8	19046.5	13877.5	9780.800000000001	10252.3	8996.0	12384.6	12804.7	14810.300000000001	True	False	12194.783493004456	12259.183376976662	15048.899935822925	12660.88112120872	11067.146637169055	12233.411876485081	11013.581999081225	11949.02659834189	12209.412291862769	12128.011155258755	1.0055056296445397	1.0108156415787126	1.2408382333403165	1.0439371269640456	0.9125277422234473	1.0086906847196149	0.9081111369447983	0.98524205208706	1.0067118289686532	1.0	13.566055365152382	-7.536391927396194	16.33553756966667	0.9691952657547301	1.0889213848677866	0.37008870554449547	0.0687413380197494	4.032397676602985	4872.764406790867	0.020591284125981234	0.026680633383990623	2.9080915374231144e-08	7.536391927396194	0.11972611911305642	
T(ph)PEVEKIS(ph)ARPTT(ph)VT(ph)PETVPRS(ph)TK	ddPTM_K562_Methotrexat_30min_R1	1	TPEVEKISARPTTVTPETVPRSTK	24	3	H0YCP4;H7C4X4;Q5JPC9;H7C556;D3YTG3;Q7Z7G0	H0YCP4	ABI3BP;DKFZp667H216	Target of Nesh-SH3	5	T(0.998)PEVEKIS(0.982)ARPT(0.482)T(0.527)VT(0.506)PET(0.506)VPRS(0.512)T(0.487)K	41.208999999999996	0.0307	0.0	0.0	0.0	0.0	136.98	0.0	0.0	0.0	0.0	0.0	121.0	True	False	0.0	0.0	0.0	124.97117607516996	0.0	0.0	0.0	0.0	0.0	99.08572748602721	0.0	0.0	0.0	1.2612429584552736	0.0	0.0	0.0	0.0	0.0	1.0	6.63060535847435	-12.596615225017786	3.8920788602088057	1.0229213201260552	0.1483815245213449	0.3197128311327435	0.3761113114109059	2647692893.540776	4120960045.2553215	630118027.8900652	0.0978775078217883	2.531539889633107e-13	12.596615225017786	-0.8745397956047103	
T(ph)PKDSPGIPPSANAHQLFR	ddPTM_K562_Methotrexat_30min_R1	1	TPKDSPGIPPSANAHQLFR	19	1	B4DG22;B1AXG1;B7ZB17;P51812	B4DG22	RPS6KA3	Ribosomal protein S6 kinase alpha-3	1	T(0.814)PKDS(0.181)PGIPPS(0.005)ANAHQLFR	97.12899999999999	0.0045268999999999995	34315000.0	1461.0	873.64	1769.3	1406.3	1131.6	1022.0	879.87	1132.0	1082.1	2012.9	True	False	1396.7761893520044	1017.9941606590646	1397.9481089151025	1283.0118624216047	1280.4252346045823	1219.4870358619776	1077.2032451680311	1092.1869183762922	1031.7934071883535	1648.3443046001994	0.8473813301346578	0.6175858756074483	0.8480922978371137	0.7783639976435598	0.7767947697766611	0.7398254311666762	0.6535062135755086	0.6625963491536427	0.6259574557990247	1.0	10.686801907436717	-8.526084230303411	24.004543213748907	0.7058648574339527	0.7682658676864068	0.0	0.11533644527911407	186.03007489528449	1393053.517934548	0.041256200504641787	0.03214658916369364	2.9779388098054227e-09	8.526084230303411	0.06240101025245415	
T(ph)PLQWGIS(ph)S(ph)QEPAVCLSFQLIQ	ddPTM_K562_Methotrexat_30min_R1	1	TPLQWGISSQEPAVCLSFQLIQ	22	0	Q6UXF7-2	Q6UXF7-2			3	T(1)PLQWGIS(1)S(1)QEPAVCLSFQLIQ	51.348	0.031652	300480000.0	2709.5	2405.5	2576.6	2233.9	2141.4	2430.6	2233.6	2062.7	2382.5	1940.9	True	False	2590.3936242636955	2802.967988491117	2035.806871322361	2038.057455353497	2423.031634307398	2900.279050260394	2734.541657753204	1990.153671850509	2271.738095024722	1589.3842022944636	1.629809595769328	1.7635559636522762	1.2808777565446	1.282293766611824	1.5245097005553885	1.8247816016250187	1.7205038616877975	1.2521539279033271	1.4293196646507496	1.0	10.634252194588026	-10.08543326041582	1.2374951022445642	1.0110930064613082	1.5562546937371458	0.42752277557409424	0.19205604196821044	0.6015172594129016	2.009476176133863	0.20009678490716037	0.061828904516957606	8.21422774107396e-11	10.08543326041582	0.5451616872758376	
T(ph)PMYGSQTPLQDGSRTPHYGSQTPLHDGSR	ddPTM_K562_Methotrexat_30min_R1	1	TPMYGSQTPLQDGSRTPHYGSQTPLHDGSR	30	1	O00267-2;O00267	O00267-2	SUPT5H	Transcription elongation factor SPT5	1	T(0.242)PMY(0.16)GS(0.16)QT(0.152)PLQDGS(0.137)RT(0.137)PHY(0.004)GS(0.001)QT(0.005)PLHDGSR	43.68600000000001	0.015954	7602600.0	1307.4	1015.0	1386.0	1385.8	1245.2	1010.5	1247.1	1226.9	1543.6	1438.0	True	False	1249.9282614365575	1182.7114979498997	1095.0975408106776	1264.3090655933017	1408.9656257773293	1205.7648236189125	1526.7939207485772	1183.7492315864595	1471.838372919269	1177.5642654950996	1.0614522689434984	1.0043710841145779	0.9299683872032671	1.07366459958067	1.1965084769152183	1.0239482115330294	1.2965695083373188	1.0052523384689833	1.2499006772258359	1.0	10.201590081639052	-7.518297453181392	21.94278421416966	1.1323855272077465	0.9996148953076407	0.25497625099081234	0.09951004380713176	49.28241939939758	236047.87148387567	0.0268341504198194	0.03573628559365211	3.031813949398497e-08	7.518297453181392	-0.13277063190010585	
T(ph)PPGPCCSPGVGWAQR	ddPTM_K562_Methotrexat_30min_R1	2	TPPGPCCSPGVGWAQR	16	0	H3BSW6;Q2VPK5-3;Q2VPK5;Q2VPK5-5	H3BSW6	CTU2	Cytoplasmic tRNA 2-thiolation protein 2	1	T(1)PPGPCCSPGVGWAQR;T(0.954)PPGPCCS(0.046)PGVGWAQR	168.22	2.3473000000000004e-07	108317000.0	253.06	0.0	245.70999999999998	262.69	0.0	0.0	238.01999999999998	251.295	168.14	300.41999999999996	True	False	241.93578540548833	0.0	194.13882882582357	239.66037555253595	0.0	0.0	291.40204395523716	242.45681241463814	160.32320809966697	246.01102687067996	0.9834347203170943	0.0	0.7891468577458363	0.9741855013617648	0.0	0.0	1.1845080590977648	0.985552621355017	0.6516911462832261	1.0	7.942579172229941	-8.778248806639628	24.999895030638587	0.9542339963949055	0.4547105207664029	0.29370115098822946	0.37804374350180225	338.2262726784557	503023.7581422859	0.16269448726959762	0.11001453502372643	1.6662923227450458e-09	8.778248806639628	-0.4995234756285026	
T(ph)PPRDLPTIPGVTSPSSDEPPMEASQSHLR	ddPTM_K562_Methotrexat_30min_R1	2	TPPRDLPTIPGVTSPSSDEPPMEASQSHLR	30	1	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	1	T(0.992)PPRDLPT(0.006)IPGVT(0.001)S(0.001)PSSDEPPMEASQSHLR;T(0.979)PPRDLPT(0.02)IPGVT(0.001)SPSSDEPPMEASQSHLR	72.107	5.4706e-05	295880000.0	826.8900000000001	489.29	1237.12	705.55	689.4300000000001	740.46	576.69	890.99	909.17	849.0699999999999	True	False	790.5409056901295	570.1368559920265	977.4654182450979	643.6955269370427	780.102129280167	883.543415434795	706.0274125222493	859.6533766820601	866.9028851431794	695.29519534348	1.1369860039081638	0.8199925151365033	1.4058279487494862	0.9257873939702017	1.1219725585688707	1.2707457513758875	1.0154354830159116	1.236386188829316	1.2468127076801159	1.0	9.441481809970504	-7.996722882847575	24.903391068482264	1.1640378075820885	1.0712101338107298	0.04990585125519853	0.16523232830278253	286.0893641741358	2174008.6985725095	0.04919783227421048	0.05551396663045182	1.007574382707117e-08	7.996722882847575	-0.0928276737713587	
T(ph)PQSPAPCVLLR	ddPTM_K562_Methotrexat_30min_R1	1	TPQSPAPCVLLR	12	0	Q9Y613	Q9Y613	FHOD1	FH1/FH2 domain-containing protein 1	1	T(0.747)PQS(0.253)PAPCVLLR	140.63	7.8774e-06	97548000.0	699.26	581.18	832.4	856.07	605.62	439.21	634.2	1000.6	585.6	885.56	True	False	668.5213676702829	677.2101166290863	657.6906154190536	781.0196722344191	685.2696452644287	524.0811164588448	776.4354939770247	965.4083308545207	558.3755838180389	725.1765027481509	0.921874006034164	0.933855570420043	0.9069386734493593	1.0770063140140962	0.9449694559428085	0.7226945639754888	1.0706848484949818	1.3312735964223605	0.7699857644339023	1.0	9.502188369244665														
T(ph)PSIDLQR	ddPTM_K562_Methotrexat_30min_R1	2	TPSIDLQR	8	0	A0A0U1RR27;Q7Z401;Q7Z401-2	A0A0U1RR27	DENND4A	C-myc promoter-binding protein	1	T(0.992)PS(0.008)IDLQR;T(0.98)PS(0.02)IDLQR	116.52	0.018323	39928000.0	4886.9	3843.8	6198.0	5013.8	4388.7	4010.3999999999996	3727.6	4307.1	4551.9	5109.1	True	False	4672.077727408839	4478.922616571256	4897.124500681514	4574.247938426681	4965.890974822488	4785.353041703401	4563.609188503243	4155.616851712481	4340.283162536423	4183.792481808773	1.1167087630954788	1.0705412938250918	1.1704989006922129	1.0933257226106736	1.1869352976789114	1.1437835558312768	1.0907828742333472	0.9932655287711327	1.0374040255122776	1.0	12.030595579628852	-9.092669517073965	3.6382236893081177	1.0119512774782804	1.1298605133999529	0.715023652083748	0.033802853012581874	0.13399292588419442	3.273428938406035	0.017294675683460943	0.009599600029879128	8.078495416824512e-10	9.092669517073965	0.11790923592167246	
T(ph)PSSEEISPTKFPGLYR	ddPTM_K562_Methotrexat_30min_R1	1	TPSSEEISPTKFPGLYR	17	1	J3QLT3;E7ENF8;A0A1W2PRI7;Q15311	J3QLT3	RALBP1	RalA-binding protein 1	1	T(0.572)PS(0.424)S(0.004)EEISPTKFPGLYR	106.31	0.005081399999999999	19157000.0	1079.8	858.12	1617.8	1104.5	944.87	649.16	504.86	682.31	824.68	953.68	True	False	1032.3332849160129	999.9097444539591	1278.2458885451044	1007.6701998468772	1069.1369666143792	774.6009825833282	618.0877065424801	658.3127705630104	786.3408068016735	780.9593106518544	1.321878452354119	1.2803608726034015	1.6367637482651598	1.2902979529186878	1.3690046997736507	0.9918583106932691	0.7914467477525456	0.8429539946370921	1.0068908790463453	1.0	9.609103573161176	-8.31026747682441	3.389519461537569	0.8959157922015096	1.388369132723667	0.8048077228391878	0.11193035884874307	0.104126634747618	2.435311009385373	0.04160993431046116	0.03740737294469123	4.894772632701029e-09	8.31026747682441	0.4924533405221573	
T(ph)PSTVTLNNNSAPANR	ddPTM_K562_Methotrexat_30min_R1	1	TPSTVTLNNNSAPANR	16	0	Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5	Q9ULH0-2	KIDINS220	Kinase D-interacting substrate of 220 kDa	1	T(0.658)PS(0.302)T(0.04)VTLNNNSAPANR	142.19	2.2940999999999998e-06	22916000.0	1362.7	956.72	1497.7	1252.8	925.26	1135.8	849.33	1162.6	1316.6	1285.6	True	False	1302.7973396509078	1114.8017185405201	1183.3532372814939	1142.9689690974799	1046.9479078916897	1355.2772752759638	1039.813872752296	1121.7106990320474	1255.3915533723186	1052.7653822812933	1.2375001701022947	1.0589270290449682	1.124042694790384	1.0856825160993797	0.9944741017443056	1.287349772405264	0.9876976297407006	1.0654897263066845	1.1924703970147117	1.0	10.039968239987486	-9.484300154663773	0.011311437811320357	6.689314511557731e-07	2.1719802422068235	0.1023571344240175	0.09467407453067557	2105.495400167802	24.125150950823922	2317.225486720481	2310.4437684593668	3.278686144118263e-10	9.484300154663773	2.1719795732753724	
T(ph)PSYSISSTLNPQAPEFILGCTASK	ddPTM_K562_Methotrexat_30min_R1	2	TPSYSISSTLNPQAPEFILGCTASK	25	0	Q14694;Q14694-3;Q14694-2;H3BQC6	Q14694;H3BQC6	USP10	Ubiquitin carboxyl-terminal hydrolase 10	1	T(0.491)PS(0.491)YS(0.013)IS(0.004)STLNPQAPEFILGCTASK;T(0.494)PS(0.494)YS(0.011)ISSTLNPQAPEFILGCTASK	100.14	3.1448000000000004e-06	18665600.0	3148.8	1837.8200000000002	2643.8	3383.0	2202.82	1611.79	1844.64	3427.8	3431.2	4792.8	True	False	3010.3825222666633	2141.4885174012657	2088.902509664696	3086.4176424463426	2492.529440872804	1923.2456061956725	2258.347476521255	3307.2423311044654	3271.684260922907	3924.7774768184386	0.7670199240714621	0.5456331040549159	0.5322346354672911	0.7863930275477172	0.6350753528307891	0.49002666203504675	0.5754077753095826	0.8426572845565327	0.8335973899786666	1.0	11.938395144477521	-9.370922191765587	3.80265739977805	0.8965552040428906	0.6148841004980432	0.6199452430447696	0.09862807906700005	0.17138315142591726	4.393935091823098	0.0622817878251936	0.027283892828981932	4.2567467021068214e-10	9.370922191765587	-0.28167110354484737	
T(ph)PT(ph)PDLS(ph)DPFLS(ph)FK	ddPTM_K562_Methotrexat_30min_R1	1	TPTPDLSDPFLSFK	14	0	A8K5M9	A8K5M9	C15orf62	Uncharacterized protein C15orf62, mitochondrial	4	T(1)PT(1)PDLS(1)DPFLS(1)FK	81.65100000000001	0.024722	94460000.0	7738.1	5751.3	11501.0	7606.4	5484.7	4799.4	4404.2	6913.8	7090.1	8387.1	True	False	7397.942389339324	6701.604569615039	9087.097270464363	6939.558721697855	6206.0341854327935	5726.8161251624	5391.953961800085	6670.637735220852	6760.482798545554	6868.114917339332	1.0771430703150267	0.9757560335363755	1.3230846279993014	1.0104022435877063	0.903600807517789	0.833826485736924	0.7850704344197107	0.9712472513207479	0.9843287248263641	1.0	12.745698463386024	-7.55190340699958	5.071622596300509	0.9038248915439784	1.119250547175675	0.46370759433321185	0.10183382760961845	0.1638060662425388	10.96293167967125	0.03115948252854394	0.04174369563156947	2.8060576739491745e-08	7.55190340699958	0.2154256556316967	
T(ph)PTSSPASSPLVAK	ddPTM_K562_Methotrexat_30min_R1	2	TPTSSPASSPLVAK	14	0	Q14684-2;Q14684	Q14684-2	RRP1B	Ribosomal RNA processing protein 1 homolog B	1	T(0.956)PT(0.01)S(0.01)S(0.022)PAS(0.002)S(0.001)PLVAK;T(0.978)PT(0.016)S(0.001)S(0.006)PASSPLVAK	191.48	1.8362999999999999e-06	58095000.0	5355.6	3513.4	4578.8	5157.299999999999	3750.2	3322.4	3246.8	4472.0	4306.7	6591.5	True	False	5120.174236614373	4093.9296324110132	3617.772453004279	4705.1675162248075	4243.417033239753	3964.4067788139287	3974.977549423846	4314.7172252462715	4106.482457016986	5397.715477059077	0.9485817209846856	0.7584559893552548	0.6702414138685591	0.8716960973994129	0.7861505578192798	0.734460124040091	0.7364185026643154	0.7993598854152882	0.7607815703643546	1.0	12.39813321651423	-12.106100737534534	5.074124879360013	1.0000022149199945	0.7810358869576237	0.43393972496929756	0.0734903572641887	5.2225758938258955e-06	9.200904180830777e-07	0.07009708461971084	0.01700054518571177	7.832479420502534e-13	12.106100737534534	-0.2189663279623708	
T(ph)PVASTHSISSAATPDR	ddPTM_K562_Methotrexat_30min_R1	1	TPVASTHSISSAATPDR	17	0	J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;P27448-6;P27448-7;H0YIY6;A2SY06	J3KNR0;P27448-6	MARK3	MAP/microtubule affinity-regulating kinase 3	1	T(0.922)PVAS(0.076)T(0.003)HSISSAATPDR	162.29	2.8018e-08	15635000.0	720.31	675.09	577.1	648.48	529.56	478.18	546.38	570.25	846.76	663.98	True	False	688.6460348748408	786.6371479320173	455.9745965381255	591.6287652301519	599.2064220901402	570.5815174251277	668.9196234613162	550.1939842792234	807.3943124210424	543.7267879022509	1.2665295332085844	1.4467507679122038	0.8386097699863537	1.0880993513538506	1.1020358669506334	1.049390116728449	1.2302495266824558	1.0118942022369792	1.4849264932045112	1.0	9.086738097222323	-6.731961899944414	24.999824656827744	1.1034742811021536	1.35664026280682	0.2794164290553567	0.16438628233890645	261.89764036333486	222111.64643699958	0.03998584915426753	0.10575882328058249	1.8536942383192095e-07	6.731961899944414	0.2531659817046663	
T(ph)PVS(ph)EDMLGRVFNGS(ph)GK	ddPTM_K562_Methotrexat_30min_R1	1	TPVSEDMLGRVFNGSGK	17	1	H0YC04;C9JNS9;C9JL73;P21281;P15313	H0YC04	ATP6V1B2;ATP6V1B1	V-type proton ATPase subunit B, brain isoform;V-type proton ATPase subunit B, kidney isoform	3	T(1)PVS(1)EDMLGRVFNGS(1)GK	50.178000000000004	0.033033	40030000.0	2039.9	2106.7	2732.4	2512.7	1981.9	1612.1	1798.7	2047.5	2261.7	3078.3	True	False	1950.228438507294	2454.796367222713	2158.906580455336	2292.4154922184225	2242.554588602707	1923.615509308311	2202.1042620884186	1975.4882644659513	2156.5540606578857	2520.79004066312	0.7736576260013571	0.9738202419178683	0.8564404593916172	0.9094035819085428	0.8896237101971332	0.7631002496353421	0.8735770240940542	0.783678224921215	0.8555072123700479	1.0	11.299660244227642														
T(ph)QFVQMVAELAT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TQFVQMVAELATR	13	0	A0A0A0MT17;A0A0A0MSY0;O75602-4;O75602-2;O75602;O75602-3	A0A0A0MT17	SPAG6	Sperm-associated antigen 6	2	T(1)QFVQMVAELAT(1)R	77.597	0.018603	9834800.0	0.0	0.0	0.0	80.778	62.898	0.0	0.0	0.0	110.52	0.0	True	False	0.0	0.0	0.0	73.69631815593576	71.17018947168525	0.0	0.0	0.0	105.38194932303557	0.0											0.0														
T(ph)QS(ph)KLLDKMT(ph)T(ph)S(ph)FWK	ddPTM_K562_Methotrexat_30min_R1	1	TQSKLLDKMTTSFWK	15	2	D3YTC1;Q9NZE8-2;Q9NZE8	D3YTC1	MRPL35	39S ribosomal protein L35, mitochondrial	5	T(1)QS(1)KLLDKMT(1)T(1)S(1)FWK	48.371	0.033158	38297000.0	2841.6	2919.2	2563.5	2250.2	2495.4	2557.5	2564.2	2848.2	2780.7	2762.9	True	False	2716.686666435768	3401.5481820840864	2025.456382300269	2052.9284596608813	2823.588839194304	3051.7006792730017	3139.2871233930723	2748.0271916248716	2651.4258639392415	2262.512036951609	1.2007390997557257	1.5034387117193664	0.8952245774697684	0.9073668675048865	1.2479884274996658	1.3488108038464646	1.3875228383857725	1.2145911918892687	1.171894699624067	1.0	11.143709752263101	-7.947562230350596	24.998570490552023	1.2537455281291559	1.1296453509167907	0.056866710161039835	0.186732378073522	273.5874370233659	130425.39431179145	0.06164780006376483	0.06990202623973436	1.1283342461648978e-08	7.947562230350596	-0.1241001772123651	
T(ph)QTSMSLGTTREKT(ph)DR	ddPTM_K562_Methotrexat_30min_R1	2	TQTSMSLGTTREKTDR	16	2	Q8NB16	Q8NB16	MLKL	Mixed lineage kinase domain-like protein	2	T(0.611)QT(0.166)S(0.193)MS(0.031)LGT(0.013)T(0.021)REKT(0.965)DR;T(0.743)QT(0.179)S(0.05)MS(0.028)LGT(0.011)T(0.035)REKT(0.955)DR	60.99100000000001	0.033574	0.0	3948.9	3531.2	4465.4	3248.3	3723.8	4774.9	3957.7999999999997	4005.2999999999997	3301.0	4229.8	True	False	3775.31108427935	4114.670779862748	3528.1735633015874	2963.526582311101	4213.544970502425	5697.581846905435	4845.437398395253	3864.4313287743503	3147.5372305043466	3463.7422323999826	1.0899515122588914	1.1879263824466941	1.018601652946028	0.8555851975906739	1.2164718641845682	1.6449208586049007	1.398902422088699	1.115680980133656	0.9087100076507305	1.0	11.758115855062943	-7.973009897317426	24.155809406028965	1.254478857885924	1.0459235285613566	0.13121409913771775	0.20879703029047267	283.4285990055194	253663.08895910386	0.07021192072491318	0.07961051768832522	1.0641187673031857e-08	7.973009897317426	-0.20855532932456744	
T(ph)QTVAVAAGRSWVAIPREQLT(ph)MSDKLLVWGT(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	TQTVAVAAGRSWVAIPREQLTMSDKLLVWGTK	32	3	Q6UWB1	Q6UWB1	IL27RA	Interleukin-27 receptor subunit alpha	3	T(0.705)QT(0.148)VAVAAGRS(0.148)WVAIPREQLT(0.515)MS(0.515)DKLLVWGT(0.969)K	43.291000000000004	0.0099976	25002000.0	558.86	584.22	542.33	652.43	514.75	743.42	723.62	778.1	706.21	715.97	True	False	534.2931835600695	680.7524249579221	428.50234437796126	595.2324748629221	582.44864750151	887.075393542575	885.9102052217828	750.7337819687217	673.3784512434031	586.3008951088506	0.9112951865114831	1.1610973659379047	0.7308573941344692	1.015233781542178	0.9934295723587027	1.5130036487116119	1.5110162931907307	1.2804581883323631	1.1485202510536607	1.0	9.195497449081367	-8.159909817020612	6.921900236781396	1.3211800244140692	0.9603684747651882	0.4640664658646326	0.1750193516008938	0.22047478050916278	13.033818853502776	0.05816658799594356	0.05822142273010019	6.919746472932586e-09	8.159909817020612	-0.36081154964888107	
T(ph)QVLSPDSLFTAK	ddPTM_K562_Methotrexat_30min_R1	1	TQVLSPDSLFTAK	13	0	A8MQ02;J3KN01;P55196;P55196-5;P55196-1;H0Y8L4;H0Y948	A8MQ02	MLLT4	Afadin	1	T(0.753)QVLS(0.122)PDS(0.126)LFTAK	139.64	3.0195e-05	12109000.0	2081.5	1386.3	2770.9	1920.2	1379.4	1393.6	1372.5	1583.9	1506.8	2360.3	True	False	1989.9997523177258	1615.3625119290105	2189.3259565889657	1751.8590473028275	1560.8152780254165	1662.8934766900713	1680.3180628878372	1528.193339236933	1436.7491968869886	1932.8267982253726	1.029579967612642	0.8357513013644873	1.1327067477536519	0.9063714601387456	0.807529820808818	0.8603427261133068	0.8693578050711132	0.7906519821848733	0.7433408923169638	1.0	10.916496647230986	-7.518324346035031	18.89940927104164	0.8385414347153376	0.9890787011268949	0.3545872589108019	0.09251526162671538	8.62359328366359	35785.60434304883	0.02588387902211072	0.03463318665756206	3.031626215941531e-08	7.518324346035031	0.1505372664115573	
T(ph)RDDFLGQVDVPLYPLPT(ph)ENPRLER	ddPTM_K562_Methotrexat_30min_R1	1	TRDDFLGQVDVPLYPLPTENPRLER	25	2	P46934-2;P46934	P46934-2	NEDD4	E3 ubiquitin-protein ligase NEDD4	2	T(1)RDDFLGQVDVPLY(0.027)PLPT(0.973)ENPRLER	54.647	0.01872	13030000.0	406.46	537.88	643.67	593.98	415.44	542.33	458.98	530.89	488.96	767.15	True	False	388.59250508146175	626.7555276032439	508.5724632710021	541.9066956134429	470.0776418028702	647.1275970244873	561.9179486369835	512.2182977886837	466.22835632457	628.2117011645104	0.6185693522758829	0.9976820336861488	0.8095558588422754	0.8626179592148878	0.7482790290780823	1.0301107028489165	0.8944722735908314	0.8153593714335299	0.7421516591625509	1.0	9.29510700486711														
T(ph)RS(ph)PSPTLGESLAPHK	ddPTM_K562_Methotrexat_30min_R1	1	TRSPSPTLGESLAPHK	16	1	Q86UU1-3;Q86UU1-2;Q86UU1	Q86UU1-3	PHLDB1	Pleckstrin homology-like domain family B member 1	2	T(0.915)RS(0.935)PS(0.139)PT(0.011)LGESLAPHK	85.77	0.02528	39458000.0	2578.0	2123.1	4023.4	3057.8	2286.3	2231.5	2085.8	2812.8	2431.6	3278.6	True	False	2464.6742068100416	2473.9061884703774	3178.943323014197	2789.727421540769	2586.9885241043257	2662.7057930782803	2553.59374540725	2713.8722296897818	2318.5554467417046	2684.8137697164375	0.9180056488872796	0.9214442418222789	1.1840461185320679	1.0390766961223579	0.9635634893132853	0.9917655455705994	0.9511250926267982	1.0108232683775358	0.8635814792422581	1.0	11.390606304781706	-7.772521991992687	24.3240163749075	0.9648145103547437	1.020943461063708	0.0937495513075155	0.07870568951620963	391.91599209866564	860170.7755182007	0.025515324310328574	0.029220230698012703	1.6884103588645504e-08	7.772521991992687	0.05612895070896429	
T(ph)RSEPLPPSATAPPPPGPMQPR	ddPTM_K562_Methotrexat_30min_R1	2	TRSEPLPPSATAPPPPGPMQPR	22	1	J3KPH8;Q8WUI4-8;Q8WUI4-5;Q8WUI4-6;Q8WUI4-7;Q8WUI4;Q8WUI4-4;Q8WUI4-3;Q8WUI4-10	J3KPH8	HDAC7	Histone deacetylase;Histone deacetylase 7	1	T(0.665)RS(0.335)EPLPPSATAPPPPGPMQPR;T(0.779)RS(0.221)EPLPPSATAPPPPGPMQPR	122.65	6.3328e-06	37743000.0	1087.6399999999999	989.49	1929.98	1386.7	945.1	1111.01	928.48	966.27	1160.74	1593.35	True	False	1039.8286479033638	1152.9864040457603	1524.9035727372222	1265.130163990642	1069.3972156458024	1325.6969586233026	1136.7152750674684	932.2857364129509	1106.7774507529887	1304.7788751228218	0.7969385983548227	0.8836642177681081	1.1687065155723644	0.9696126969188954	0.8196003445757333	1.016031899273746	0.8711938066597429	0.7145162710617864	0.8482490572579244	1.0	10.349589614220093	-8.989753207938758	22.408298029324094	0.8274006232560974	0.9455197568786523	0.0961511525358062	0.1183600469352613	108.25990092206828	236746.35314132896	0.05073129959240197	0.034136338863132776	1.0238746537230725e-09	8.989753207938758	0.11811913362255488	
T(ph)RSPDVISSASTALSQDIPEIASEALSR	ddPTM_K562_Methotrexat_30min_R1	1	TRSPDVISSASTALSQDIPEIASEALSR	28	1	Q6P2E9-2;Q6P2E9	Q6P2E9-2	EDC4	Enhancer of mRNA-decapping protein 4	1	T(0.415)RS(0.292)PDVIS(0.086)S(0.086)AS(0.086)T(0.035)ALSQDIPEIASEALSR	93.176	9.2166e-05	244920000.0	128.86	144.57	201.33	147.78	188.63	126.87	149.98	212.37	188.6	196.45	True	False	123.19546869260735	168.45773523016456	159.07358433723934	134.82435684325162	213.43815129326822	151.38583193719091	183.61683283928437	204.90082672753815	179.83202716544068	160.87100136057882	0.7658028336410679	1.0471603570899688	0.988826966898088	0.8380898714060601	1.3267658526900354	0.9410386623868419	1.141391744231906	1.2736964710517975	1.1178647838609665	1.0	7.329760478771079	-5.036566945345494	0.43439060288983566	1.1408285322253822	9.503467640532617e-11	0.3240723535373242	0.13831695819150366	16.7428545091807	1.0797089325437312	0.0929401934030702	12.323469689302717	9.192487641169086e-06	5.036566945345494	-1.1408285321303475	
T(ph)RSWDSSSPVDRPEPEAASPTTR	ddPTM_K562_Methotrexat_30min_R1	2	TRSWDSSSPVDRPEPEAASPTTR	23	2	C9J0I9;Q86WB0;Q86WB0-2	C9J0I9	ZC3HC1	Nuclear-interacting partner of ALK	1	T(0.594)RS(0.378)WDS(0.009)S(0.009)S(0.009)PVDRPEPEAASPTTR;T(0.542)RS(0.433)WDS(0.008)S(0.008)S(0.008)PVDRPEPEAASPTTR	80.016	0.0011663	91378000.0	1256.1599999999999	827.5899999999999	1255.6100000000001	1392.44	989.4	1002.9300000000001	1127.97	1300.1799999999998	1398.99	1525.6999999999998	True	False	1200.9407104835143	964.3351808752296	992.0746199258979	1270.3669471025667	1119.5234421330622	1196.7320282554335	1380.9459857162794	1254.4519324509608	1333.9512602554607	1249.3809456647245	0.9612286105776665	0.771850398568518	0.7940529454753861	1.0167971198141466	0.8960625228179924	0.9578599965110886	1.1053041832501749	1.0040587995229415	1.0676897745913205	1.0	10.286997717273293	-7.959767178909224	0.9609641630151616	1.0431244934986565	0.8453614698762651	0.5027192970945418	0.07275588240238828	0.44163336240477785	0.8852794996315996	0.03777092509042872	0.047436752643104395	1.0970661651364706e-08	7.959767178909224	-0.1977630236223914	
T(ph)RSYDNLTTACDNTVPLASR	ddPTM_K562_Methotrexat_30min_R1	1	TRSYDNLTTACDNTVPLASR	20	1	Q13615-3;Q13615-2;Q13615;G5E953	Q13615-3	MTMR3	Myotubularin-related protein 3	1	T(0.774)RS(0.226)Y(0.001)DNLTTACDNTVPLASR	124.88	6.4375e-05	55981000.0	1702.7	1056.3	2000.6	1736.2	1505.1	1002.7	1304.2	1692.3	1512.1	1644.4	True	False	1627.8513467554135	1230.83562096993	1580.7013998166242	1583.9900416243981	1703.0470312861057	1196.4575840105717	1596.7000492665334	1632.7808497952296	1441.802801043812	1346.5832254382071	1.2088754085182338	0.9140434825848879	1.1738609021378756	1.1763031142088776	1.2647172481536726	0.888513655456549	1.1857418235303896	1.2125361574022933	1.0707119870549542	1.0	10.39508768287633	-10.00504344595627	24.75527654794938	0.9999999865474127	1.1237563705517235	0.10095307780816687	0.11976206465825438	379.7716314784321	1864082.9149451319	0.11383049434268545	0.0293909072448994	9.884542067176855e-11	10.00504344595627	0.12375638400431077	
T(ph)S(ph)AVTPAVR	ddPTM_K562_Methotrexat_30min_R1	1	TSAVTPAVR	9	0	O94991-2;O94991	O94991-2	SLITRK5	SLIT and NTRK-like protein 5	2	T(0.999)S(0.998)AVT(0.003)PAVR	50.126999999999995	0.032779	4688300.0	1383.4	1151.4	1751.6	1244.2	1616.1	1497.4	1266.0	1202.0	1512.2	1698.3	True	False	1322.5873924363889	1341.6492795463193	1383.9630970302894	1135.1229177451187	1828.6454768862377	1786.7513576318247	1549.9327268604757	1159.724978699915	1441.8981520656391	1390.7214131365283	0.9510081458036408	0.9647146199614951	0.9951404242126417	0.8162115769721615	1.314889854728021	1.2847658350223574	1.1144810975225254	0.8339017201758321	1.0367986991828153	1.0	10.44161773535515	-7.738475542375722	24.999853972250804	1.0993831704098793	0.9386485913011557	0.2627351837727354	0.13576692097137255	389.17264850831384	423675.68005593994	0.044757844266892874	0.05774346592040432	1.826099584367203e-08	7.738475542375722	-0.16073457910872357	
T(ph)S(ph)HLQLQPMYMQIPLDNN	ddPTM_K562_Methotrexat_30min_R1	1	TSHLQLQPMYMQIPLDNN	18	0	A0A1W2PRU3	A0A1W2PRU3			2	T(0.941)S(0.941)HLQLQPMY(0.117)MQIPLDNN	42.208999999999996	0.033382	52947000.0	144.68	239.3	200.91	308.88	260.87	45.49100000000001	254.87	166.23	237.93	334.61	True	False	138.32004043494055	278.8402575954788	158.7417365975997	281.8009699671376	295.17897751086736	54.2814919260247	312.03108538304053	160.38359667993907	226.86868623262623	274.00888656280625	0.5048012937464926	1.0176321691361099	0.5793306143785016	1.0284373382997756	1.0772605998791527	0.19810120980723267	1.1387626485300837	0.5853226101233661	0.8279610529369641	1.0	8.098078872713053	-10.022485454870434	23.23694787726854	1.0000000192440197	0.7763048124963099	0.05584830094369175	0.2875876172050879	2465.6631516909606	2548069.4145223536	0.2602306923040865	0.06719127585238013	9.495428001859924e-11	10.022485454870434	-0.22369520674770982	
T(ph)S(ph)RT(ph)KRR	ddPTM_K562_Methotrexat_30min_R1	1	TSRTKRR	7	3	J3KN16	J3KN16	KIAA0368		3	T(1)S(1)RT(1)KRR	65.305	0.029233	21167000.0	2473.6	2092.8	3453.4	2591.9	2482.9	2259.7	2309.5	2560.3	2659.0	2972.0	True	False	2364.8635058050095	2438.599628482315	2728.5785335033142	2364.6721511843543	2809.44487009519	2696.3550439699716	2827.4641648374945	2470.2527978081444	2535.3836703759644	2433.742000731179	0.971698522314413	1.0019959501663187	1.121145352581973	0.9716198966340419	1.1543725132948097	1.1079050462867037	1.161776459455451	1.0150019176502671	1.0417635351710448	1.0	11.24896052173835	-6.6098055346223905	5.9555957080100965	1.075926136911286	0.9789202865401814	0.2350562423655974	0.06181361468421537	0.2529958267804324	13.379974157600245	0.015787760759119845	0.04330596394374784	2.4558083143778967e-07	6.6098055346223905	-0.09700585037110465	
T(ph)S(ph)S(ph)SYRHDEKRNIY(ph)QK	ddPTM_K562_Methotrexat_30min_R1	1	TSSSYRHDEKRNIYQK	16	3	E7EM81;E7ETM2;B5BNW5;Q9Y691	E7EM81	KCNMB2	Calcium-activated potassium channel subunit beta-2	4	T(0.88)S(0.88)S(0.434)S(0.434)Y(0.373)RHDEKRNIY(1)QK	67.964	0.022015	0.0	241.05	255.73	331.48	281.14	235.98	202.06	224.62	324.26	272.81	395.54	True	False	230.45373062512033	297.9850358332295	261.9068779422247	256.4928926980089	267.01550624071166	241.1052352898935	274.99675284944715	312.85559200768233	260.1271226458318	323.9038731390348	0.7114880362242496	0.9199798475559455	0.8085944616963625	0.7918796716206913	0.824366512363673	0.7443728071334293	0.8490073001733005	0.9658902469294957	0.8030997595825999	1.0	8.339421909297357	-10.25419310538757	0.5276048809353943	1.002572728494184	0.8048279099771137	0.4013670662245994	0.06853337876457083	1.348519771041417	0.8130614061086338	0.08574202288164963	0.03459612445967213	5.569380560477447e-11	10.25419310538757	-0.19774481851707038	
T(ph)SAVSSPLLDQQR	ddPTM_K562_Methotrexat_30min_R1	1	TSAVSSPLLDQQR	13	0	Q5T200-2;Q5T200;A0A087WX14	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	1	T(0.454)S(0.069)AVS(0.238)S(0.238)PLLDQQR	203.88	3.9411000000000005e-11	301170000.0	3311.9	2939.4	3928.3	3290.3	2844.6	3071.3	2528.6	2950.8	3127.5	4147.0	True	False	3166.312841557087	3425.085888742796	3103.803513395803	3001.8445075203063	3218.714759947151	3664.785257576216	3095.7029171717204	2847.0186914706383	2982.1032076347606	3395.9381147483873	0.9323823740503251	1.0085831287289428	0.9139752870984725	0.8839514755829759	0.9478131376918901	1.0791672679959152	0.9115899090525942	0.8383600040018928	0.8781382660313028	1.0	11.729594453105717	-8.985977235226802	24.999674165538412	0.8899444333788453	0.9601124224945194	0.13495020860013895	0.06347076915928034	377.02013986101025	672147.1131338816	0.027110316634949616	0.01826913293122842	1.0328155422893693e-09	8.985977235226802	0.07016798911567412	
T(ph)SDIFGSPVTATSR	ddPTM_K562_Methotrexat_30min_R1	1	TSDIFGSPVTATSR	14	0	H3BU16;A6NGP5;Q9H910-2;Q9H910;Q9H910-3;H3BMT0;H3BTV5;H3BMV3	H3BU16	HN1L	Hematological and neurological expressed 1-like protein	1	T(0.989)S(0.009)DIFGS(0.001)PVTATSR	164.13	3.7557e-05	31477000.0	2122.4	2013.6	2652.4	2279.4	1601.7	1695.8	1530.8	1959.0	1767.3	2918.1	True	False	2029.1018372900048	2346.313174652136	2095.6974871906486	2079.5685409968037	1812.3516244840584	2023.4893497208827	1874.1208675181792	1890.1008596282306	1685.138608745934	2389.6038130328598	0.8491373449537186	0.9818837590798033	0.8770062534051667	0.8702566214762761	0.7584318432200027	0.8467886344526256	0.7842809997610294	0.7909682974724311	0.7051958151201534	1.0	11.222555729498758	-7.446040440308385	2.5270497745486358	0.804221971927126	0.9125452899246003	0.18992654406026033	0.07952551771815297	0.3839181061928962	4.8147127560315095	0.02289128700540668	0.03601835025698591	3.580630936991799e-08	7.446040440308385	0.1083233179974743	
T(ph)SDSPWFLSGSETLGR	ddPTM_K562_Methotrexat_30min_R1	1	TSDSPWFLSGSETLGR	16	0	E7EMW7;O95071-2;O95071	E7EMW7	UBR5	E3 ubiquitin-protein ligase UBR5	1	T(0.395)S(0.395)DS(0.209)PWFLSGSETLGR	97.223	0.0075568	9931600.0	875.49	634.43	926.69	1003.4	748.42	726.6	694.67	888.56	928.03	1061.6	True	False	837.0045078821269	739.2587740338477	732.1904329681432	915.4334798790009	846.8503482527055	867.0051665922822	850.4674307805424	857.3088411593976	884.8860878597243	869.3339528856734	0.9628112477417545	0.8503737505937123	0.8422429959599588	1.053028559209386	0.9741369762927864	0.9973211833201027	0.978297727769052	0.9861674426883253	1.0178897130641533	1.0	9.763766681682586	-7.256814212898306	24.999993114582406	0.9981853394700166	0.8816657709144312	0.6731675555940522	0.03692735034298688	223.09836122305938	1205889.668159897	0.009970596019178966	0.016552537472974548	5.5358687783704684e-08	7.256814212898306	-0.11651956855558543	
T(ph)SMLRSLLCSCSWR	ddPTM_K562_Methotrexat_30min_R1	1	TSMLRSLLCSCSWR	14	1	Q7L591-2;Q7L591-4;Q7L591-3	Q7L591-2	DOK3	Docking protein 3	1	T(0.496)S(0.496)MLRS(0.008)LLCSCSWR	78.28699999999999	0.031772	43360000.0	4067.9	3186.0	4513.7	3639.9	3131.5	3147.3	3125.2	4133.2	4290.6	4658.6	True	False	3889.07998676593	3712.432347259487	3566.33605336014	3320.7956183093215	3543.3471387100135	3755.4711819651684	3826.1056540160803	3987.833013279939	4091.1309425028617	3814.8823972430278	1.0194495090009914	0.9731446374185532	0.9348482291190655	0.8704844009632441	0.9288221155312023	0.9844264621837897	1.0029419666465114	1.0453357660938385	1.0724133843442922	1.0	11.897422867926503	-8.774100868899684	1.9245258512618417	1.0422551535999	0.9433036037360177	0.5101006026472045	0.03953705679184164	0.28851813663259507	2.185822219039549	0.022476885859509643	0.014074686889017182	1.6822832898793864e-09	8.774100868899684	-0.09895154986388233	
T(ph)SPDPSPVSAAPSK	ddPTM_K562_Methotrexat_30min_R1	1	TSPDPSPVSAAPSK	14	0	Q13469-3;Q13469-4;Q13469-2;Q13469;Q13469-5	Q13469-3	NFATC2	Nuclear factor of activated T-cells, cytoplasmic 2	1	T(0.861)S(0.139)PDPSPVSAAPSK	105.19	0.0057119	19245000.0	3220.0	2422.1	4345.9	3598.9	2301.7	2363.5	2023.6	2705.5	3041.5	4041.2	True	False	3078.452655519135	2822.310856339364	3433.7549802374638	3283.390024652715	2604.413894034435	2820.2129249117265	2477.443812065448	2610.346031508003	2900.101328863668	3309.299519971346	0.9302429825227153	0.8528423732294264	1.0376077957026977	0.9921707010313605	0.7869985410256808	0.8522084229281687	0.7486308800742519	0.7887911069260376	0.8763490011592481	1.0	11.692310158488912	-7.761346446498152	24.99999990977677	0.8274282085811419	0.9520744159740805	0.31552360658852174	0.07834030349148045	2.7244242325487815	732683.8082202569	0.023517327984309385	0.02844723792621175	1.7324214547376158e-08	7.761346446498152	0.12464620739293863	
T(ph)SPPLLDR	ddPTM_K562_Methotrexat_30min_R1	6	TSPPLLDR	8	0	Q9UQ35	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	T(0.927)S(0.073)PPLLDR;T(0.936)S(0.064)PPLLDR;T(0.951)S(0.049)PPLLDR;T(0.939)S(0.061)PPLLDR;T(0.888)S(0.112)PPLLDR;T(0.931)S(0.069)PPLLDR	191.45	1.6032e-12	1841128000.0	33683.2	28152.7	43660.200000000004	32931.0	30556.9	26858.9	24759.5	33460.4	31924.199999999997	34916.9	True	False	32202.52685912486	32804.45516092036	34496.52067193529	30043.990358675877	34575.66794917704	32049.002296979703	30312.448144314345	32283.57876646475	30440.050910047506	28593.111058321185	1.1262337558666342	1.1472852707076655	1.2064626546433843	1.05074226786289	1.2092307087064877	1.1208644708723565	1.0601311652476795	1.1290684214325661	1.0645938753554705	1.0	14.803379979729339	-10.041930110775004	0.4229395830975266	0.9922242211875849	1.1536256768143045	0.4687869452834166	0.04691052373459667	1.1789186780730299	0.540585981346408	0.06745295693353423	0.034042300068187016	9.079666337584282e-11	10.041930110775004	0.1614014556267196	
T(ph)SPQVLGSILK	ddPTM_K562_Methotrexat_30min_R1	1	TSPQVLGSILK	11	0	Q7Z417	Q7Z417	NUFIP2	Nuclear fragile X mental retardation-interacting protein 2	1	T(0.979)S(0.021)PQVLGSILK	149.82	1.3959000000000002e-07	37552000.0	4420.8	2666.6	5711.1	4966.3	2985.5	3016.6	2868.7	4090.4	3432.7	5775.0	True	False	4226.466925316456	3107.210325549953	4512.418156799321	4530.912189678176	3378.145579632362	3599.515256733115	3512.078999640321	3946.5383135392076	3273.114526250308	4729.091539105841	0.8937164549188618	0.6570416960331144	0.9541828741281909	0.9580935687565195	0.7143328801520914	0.761143070919219	0.7426540532358509	0.8345235614291798	0.6921233178051733	1.0	12.207347352390537	-7.77899993944478	24.999489029627743	0.778632587560291	0.8571663637755381	0.08874783033556466	0.11239675649954986	587.127911361022	835840.7398542014	0.03426706306115739	0.03893920031340448	1.6634128823057097e-08	7.77899993944478	0.07853377621524715	
T(ph)SPSGGTWSSVVSGVPR	ddPTM_K562_Methotrexat_30min_R1	4	TSPSGGTWSSVVSGVPR	17	0	H0YH87;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHH4;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A2R8Y5A6;A0A5F9ZHX3;A0A5F9ZHW5;Q99700-2;Q99700-5;Q99700-4;Q99700	H0YH87	ATXN2	Ataxin-2	1	T(0.805)S(0.174)PS(0.019)GGTWSSVVSGVPR;T(0.951)S(0.049)PSGGTWSSVVSGVPR;T(0.5)S(0.5)PSGGTWSSVVSGVPR;T(0.5)S(0.5)PSGGTWSSVVSGVPR	246.38	4.473199999999999e-65	240195000.0	9820.099999999999	8012.599999999999	12055.9	10771.3	9029.2	8700.6	7819.900000000001	10065.300000000001	9574.199999999999	11568.0	True	False	9388.420162255734	9336.545959087061	9525.531343621535	9826.996852522107	10216.698063177528	10381.86781234905	9573.711635684227	9711.297693933646	9129.097531746349	9472.923103788116	0.991079528398305	0.9856034781231868	1.0055535381483653	1.037377454124208	1.0785158869380016	1.095951872363184	1.010639644256777	1.025163783927498	0.9637043847738745	1.0	13.209593958150872	-4.7646787020932555	13.539773397458642	1.022765954755303	0.6488452577472051	0.0	0.03939343942090959	0.0	0.0	0.009879540894248046	0.0	1.7191797931197484e-05	4.7646787020932555	-0.3739206970080978	
T(ph)SPTPPESATTVK	ddPTM_K562_Methotrexat_30min_R1	1	TSPTPPESATTVK	13	0	Q5M775-4;Q5M775;J3KSG2	Q5M775-4	SPECC1	Cytospin-B	1	T(0.903)S(0.095)PT(0.002)PPESATTVK	131.32	0.00078832	25127000.0	2820.2	2027.8	3643.7	2958.3	2215.1	1560.5	1941.5	2620.6	2599.4	3248.3	True	False	2696.2273848121304	2362.859483293406	2878.9371641066837	2698.9504320570554	2506.4244761157747	1862.0445395916017	2376.9307971560916	2528.4320126297803	2478.5544613671595	2660.00139332944	1.013618786656855	0.8882925735372977	1.0823066376304444	1.014642488092408	0.9422643470793683	0.7000163775331483	0.8935825383839225	0.9505378527133107	0.931786903413923	1.0	11.377211286083645	-6.238987491294936	22.17411160908486	0.9310512379418145	1.0136191915611676	0.0583304932984291	0.09577836140452578	4133.823076721721	4082376.4576526587	0.02591194334181137	1.0224268877730873	5.767830758655418e-07	6.238987491294936	0.0825679536193531	
T(ph)SPTVATQTGASATSTR	ddPTM_K562_Methotrexat_30min_R1	1	TSPTVATQTGASATSTR	17	0	Q6P1L5-2;Q6P1L5	Q6P1L5-2	FAM117B	Protein FAM117B	1	T(0.975)S(0.025)PTVATQTGASATSTR	144.41	2.9770999999999996e-09	13863000.0	3932.6	3338.2	4659.6	3827.5	3345.7	2994.2	2888.9	4064.1	3706.3	4772.1	True	False	3759.727612762281	3889.7808103018283	3681.6136372016103	3491.9490175771125	3785.7181931924256	3572.7867737553142	3536.8093638445716	3921.1632994461893	3533.994921968574	3907.82644740554	0.9621019928503775	0.9953821805173327	0.9421128821229726	0.8935783266156729	0.9687528973314095	0.9142644438898603	0.9050579424254391	1.0034128567939613	0.9043377359592932	1.0	11.93215068108117	-12.326967843117624	3.260496380830686	1.000357200344869	0.943810744259296	0.17537321225797076	0.036915804425022146	19854026.510336824	24782403.54202913	67173.885024395	0.009368298419830745	4.710122007134266e-13	12.326967843117624	-0.05654645608557307	
T(ph)SPVNLPNK	ddPTM_K562_Methotrexat_30min_R1	1	TSPVNLPNK	9	0	P35712-4;P35712-2;P35712-3;P35712	P35712-4	SOX6	Transcription factor SOX-6	1	T(0.977)S(0.023)PVNLPNK	84.81700000000001	0.014365000000000001	0.0	2467.0	2119.7	3452.9	2406.4	2105.0	1839.3	1537.8	2348.5	2192.1	3077.1	True	False	2358.5536339023924	2469.944396260496	2728.1834766704096	2195.4346481770267	2381.84439629078	2194.718693797392	1882.6907957077706	2265.901923857527	2090.189749466397	2519.8073722913587	0.9360055295646144	0.9802115921323302	1.082695251498358	0.8712708250316106	0.945248602128216	0.8709866944319832	0.7471566344358167	0.8992361673253835	0.829503783682364	1.0	11.2990977351881	-7.6906836291361245	1.624506152812612	0.8604413014591956	0.9926192979262375	0.29604971887392983	0.0752871268662682	0.414064319575337	2.2582937268191032	0.026295774280532765	0.03768766940321234	2.0385265440786124e-08	7.6906836291361245	0.13217799646704187	
T(ph)SPVSLWSR	ddPTM_K562_Methotrexat_30min_R1	4	TSPVSLWSR	9	0	P11277	P11277	SPTB	Spectrin beta chain, erythrocytic	1	T(0.88)S(0.12)PVSLWSR;T(0.857)S(0.143)PVSLWSR;T(0.875)S(0.125)PVSLWSR;T(0.99)S(0.01)PVSLWSR	173.24	8.3925e-07	180284000.0	14682.7	11802.5	17027.0	14401.500000000002	13729.900000000001	12123.2	11806.300000000001	16154.599999999999	16353.1	16914.5	True	False	14037.266088568576	13752.662516801665	13453.26538772251	13138.942854771201	15535.62250671391	14465.836823054718	14454.163312111237	15586.433561485552	15592.847950366742	13851.12014514386	1.013439053410419	0.992891720863694	0.9712763478150296	0.9485834154270661	1.1216148834114783	1.0443802863212024	1.0435375017073116	1.1252832549394993	1.125746350256988	1.0	13.757715031816547	-7.758304399355235	24.999999897637867	1.0797443955809842	0.9816242575763852	0.5578568796833836	0.04147500771569876	61.71594038658037	492152.2109611233	0.012635850450314283	0.015623931441495579	1.744598925448673e-08	7.758304399355235	-0.09812013800459907	
T(ph)SPYILR	ddPTM_K562_Methotrexat_30min_R1	1	TSPYILR	7	0	P49454	P49454	CENPF	Centromere protein F	1	T(0.651)S(0.349)PYILR	104.44	0.027641000000000002	11427000.0	2523.7	1859.8	3074.4	2126.7	2517.4	2274.0	1870.0	2343.6	2495.6	2634.1	True	False	2412.7611697930574	2167.100338805146	2429.125454161867	1940.2555129147597	2848.4822248087444	2713.4183165852623	2289.3951020766895	2261.174259634874	2379.5801007108907	2157.0389650491247	1.118552427140837	1.004664437647649	1.126138884610527	0.8994995196438522	1.3205520488795957	1.2579366254162527	1.0613601048345227	1.04827696498444	1.1031697337264827	1.0	11.074836522437877	-5.8208207731823345	18.881685439082535	1.097111072776834	53.03567962319814	0.00264207837915309	0.11720077632735434	7542.180962253549	795957.5447112172	0.02912183589116465	25115.848746052805	1.5107034701982297e-06	5.8208207731823345	51.93856855042131	
T(ph)SS(ph)PSTPSPEHQEDVDS(ph)FMK	ddPTM_K562_Methotrexat_30min_R1	1	TSSPSTPSPEHQEDVDSFMK	20	0	P61758-2	P61758-2			3	T(0.526)S(0.526)S(0.689)PS(0.2)T(0.06)PS(0.1)PEHQEDVDS(0.9)FMK	50.391999999999996	0.025196	5632600.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
T(ph)SSDPNLNNHCQEVR	ddPTM_K562_Methotrexat_30min_R1	1	TSSDPNLNNHCQEVR	15	0	J3QR65;Q9NYA4	J3QR65	MTMR4	Myotubularin-related protein 4	1	T(0.808)S(0.126)S(0.065)DPNLNNHCQEVR	210.08	7.4457e-19	5274100.0	1473.8	1235.6	1671.9	1692.5	1285.3	1374.5	1245.6	1265.0	1211.5	1816.3	True	False	1409.0135166782923	1439.7618983910309	1320.991037865348	1544.12115277577	1454.3394786472866	1640.1026720081109	1524.9575075650928	1220.509232991174	1155.1776294322974	1487.3504696931507	0.9473312076668656	0.968004466820831	0.8881504828770292	1.038169002020305	0.9778055060199266	1.102700880140559	1.0252845839889375	0.8205928984867786	0.7766680772088757	1.0	10.538528919485495	-9.262389494610465	24.998543283059213	0.8489728592309732	0.9929680295624284	0.3622555792922765	0.07608804853197984	84.85507172752096	2232544.6709513282	0.039397765046594944	0.020610061520920854	5.465255945699988e-10	9.262389494610465	0.14399517033145515	
T(ph)SSLDGAAVAVLSR	ddPTM_K562_Methotrexat_30min_R1	1	TSSLDGAAVAVLSR	14	0	Q7Z5H3-5;D6R9V6;A6NJ38;A6NHM7;Q7Z5H3-4;Q7Z5H3-3;Q7Z5H3;Q7Z5H3-2	Q7Z5H3-5	ARHGAP22	Rho GTPase-activating protein 22	1	T(0.978)S(0.012)S(0.009)LDGAAVAVLSR	227.74	4.9574000000000004e-36	57871000.0	1842.6	1684.3	2088.4	2364.0	1607.5	1432.6	1460.5	2167.5	2403.4	2407.6	True	False	1761.6015102669442	1962.6019467950914	1650.0733796746174	2156.7517903467774	1818.9144261460456	1709.4296747317699	1788.054302985565	2091.2677964493055	2291.6664585865337	1971.5603098790014	0.8935062759378927	0.9954562064173124	0.8369378159047469	1.0939314306236676	0.9225761023043094	0.8670440696976097	0.906923462612869	1.060717131487421	1.162361834483865	1.0	10.945122127713722	-9.343357167579285	5.0554684655974516	1.0888496002430883	0.9334085637969755	0.4204475942136978	0.0770245984393531	0.20983432505596192	9.315451972367452	0.0429502285830659	0.019954849878435994	4.53568444566538e-10	9.343357167579285	-0.15544103644611285	
T(ph)SSLDTLAAPYLAGHWPR	ddPTM_K562_Methotrexat_30min_R1	1	TSSLDTLAAPYLAGHWPR	18	0	Q6P1L5-2;Q6P1L5	Q6P1L5-2	FAM117B	Protein FAM117B	1	T(0.456)S(0.456)S(0.08)LDT(0.007)LAAPYLAGHWPR	169.49	1.8579e-11	4961200.0	1362.4	1037.9	1418.1	1286.7	1124.0	1222.6	1012.8	1153.6	1268.1	1691.0	True	False	1302.5105272916994	1209.395333716454	1120.460189483133	1173.8970087306263	1271.8257013923214	1458.850146814926	1239.9461814883796	1113.027234133296	1209.1463077862952	1384.7435138749756	0.9406150050465586	0.8733713655983563	0.8091463713360971	0.847736058676794	0.9184557924617589	1.0535165048237527	0.8954338251555303	0.8037786225253176	0.8731915301792599	1.0	10.435403065609739	-6.245034672666349	21.80618297843499	0.8922486723064041	0.9406152172772129	0.025842350580732254	0.07466489445970419	2352.54622460405	3126843.4553706865	0.019851880307501804	0.42081895144208753	5.688075172791305e-07	6.245034672666349	0.04836654497080872	
T(ph)SSLTQFPPSQSEER	ddPTM_K562_Methotrexat_30min_R1	1	TSSLTQFPPSQSEER	15	0	B7Z7F3;Q9H6Z4-3;Q9H6Z4-2;Q9H6Z4	B7Z7F3	RANBP3	Ran-binding protein 3	1	T(0.333)S(0.333)S(0.333)LTQFPPSQSEER	142.57	6.2679e-06	24566000.0	2406.8	2060.8	3051.9	2599.4	2240.5	2028.9	1826.0	2424.8	2286.9	2821.4	True	False	2300.999953820949	2401.3121723893137	2411.3478966811726	2371.514637828855	2535.1650213251723	2420.9562104308857	2235.526982027826	2339.518409610276	2180.582518158252	2310.4171200750184	0.9959240406538523	1.0393414035606454	1.0436850886055056	1.0264443667868306	1.0972758984935398	1.0478437808460657	0.967585879884425	1.0125956864162748	0.9438046918936651	1.0	11.173937622337334	-8.755636046029636	24.98755138649491	0.9820462021716854	1.0435586664506742	0.5123011752171132	0.029001357575447376	114.68137402898164	493789.74209121335	0.011351035287658965	0.008547856736471595	1.7553509311143191e-09	8.755636046029636	0.06151246427898882	
T(ph)SSNNNS(ph)MVSNT(ph)LAKMR	ddPTM_K562_Methotrexat_30min_R1	1	TSSNNNSMVSNTLAKMR	17	1	A0A0C4DG07;O60934	A0A0C4DG07	NBN	Nibrin	3	T(0.685)S(0.315)S(0.192)NNNS(0.808)MVS(0.003)NT(0.997)LAKMR	65.365	0.022937	33704000.0	0.0	0.0	51.852	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	40.96897379950595	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
T(ph)SSPRSPPSSSEIFTPAHEENVR	ddPTM_K562_Methotrexat_30min_R1	2	TSSPRSPPSSSEIFTPAHEENVR	23	1	I3L3A7;I3L2L5;I3L317;I3L4Q0;C9JLW8	I3L3A7	FAM195B	Protein FAM195B	1	T(0.307)S(0.307)S(0.307)PRS(0.076)PPS(0.003)S(0.001)SEIFTPAHEENVR;T(0.349)S(0.122)S(0.044)PRS(0.145)PPS(0.258)S(0.059)S(0.023)EIFTPAHEENVR	117.48	1.5031e-06	223700000.0	2931.5	1993.73	3148.3	2756.2	2168.5299999999997	1536.3400000000001	2161.3	2589.7	2336.5	2844.2	True	False	2802.6347700789884	2323.1599948843873	2487.5148540651203	2514.5682252765614	2453.729704840114	1833.215961522692	2646.026542309278	2498.6187831440657	2227.8766249843693	2329.0878191385	1.2033186327493857	0.9974548730170658	1.0680210654251845	1.079636501729964	1.0535153224697718	0.7870961096695681	1.1360784769755954	1.0727885666708235	0.95654470676354	1.0	11.185549322599451	-4.349889405920354	1.6395435858069745	1.0184266551816068	95.16474562921472	0.2641660481830592	0.09144641707585645	1082.3865724248349	7.305386368512408	0.02521203867396554	381429.6640975935	4.467973556302201e-05	4.349889405920354	94.14631897403311	
T(ph)SVPSPEQPQPYR	ddPTM_K562_Methotrexat_30min_R1	1	TSVPSPEQPQPYR	13	0	Q8TEH3	Q8TEH3	DENND1A	DENN domain-containing protein 1A	1	T(0.88)S(0.003)VPS(0.116)PEQPQPY(0.001)R	152.38	3.1603e-08	23063000.0	1798.9	1532.9	2052.0	1994.2	1278.0	1411.9	1550.3	1617.5	1560.3	2013.8	True	False	1719.8225099420415	1786.1856701550748	1621.3132422391839	1819.3715821952383	1446.079400693405	1684.7296926942518	1897.9942389034718	1560.6116081922721	1487.761993564353	1649.0813058790218	1.0428973415748668	1.0831398450684464	0.9831614951058847	1.1032637236921714	0.8769000021636839	1.021617118991127	1.1509403642725609	0.9463521311099988	0.9021762530812999	1.0	10.687446815454907	-5.970634367630091	0.26532792412105083	0.9733087201575987	1.1457001601916383	0.0908407683826723	0.07939324346732891	30.054852961901638	1.5726192631259888	0.10949201618654818	1.7416152702016954	1.0699552951221208e-06	5.970634367630091	0.1723914400340396	
T(ph)T(ph)IQVLLDPMVK	ddPTM_K562_Methotrexat_30min_R1	1	TTIQVLLDPMVK	12	0	A0A0C4DG33;O43933-2;O43933	A0A0C4DG33	PEX1	Peroxisome biogenesis factor 1	2	T(1)T(1)IQVLLDPMVK	128.08	0.00091	104590000.0	741.12	611.56	769.08	659.26	343.43	500.73	627.54	528.28	569.2	552.51	True	False	708.5412521920316	712.6098952573802	607.6606181000546	601.4636993671812	388.59706461669464	597.488985780008	768.2818194423556	509.7000929680456	542.7380162384352	452.44508506863536	1.5660270728425456	1.5750196405587613	1.3430593858874018	1.3293628756646565	0.8588822764153686	1.3205779121003594	1.6980664500440052	1.1265457616601686	1.199566608522452	1.0	8.82159888736968	-6.912982431888735	2.264929250091392	1.2341706324811976	1.5831363902175084	0.303715456159127	0.20989551591808275	0.4252069082574964	4.315309105139483	0.06245948001972999	0.17435908646040363	1.2218490854912798e-07	6.912982431888735	0.3489657577363108	
T(ph)T(ph)NKNTRSQRR	ddPTM_K562_Methotrexat_30min_R1	2	TTNKNTRSQRR	11	3	Q5JQQ2	Q5JQQ2	DPCD		2	T(0.996)T(0.977)NKNT(0.026)RS(0.001)QRR;T(1)T(0.929)NKNT(0.071)RSQRR	81.709	0.008171	0.0	1107.64	1021.04	1205.81	1321.1399999999999	1006.64	1137.59	987.05	824.8399999999999	923.1800000000001	1204.53	True	False	1058.9494718506883	1189.7495052874533	952.7269593686312	1205.317707402175	1139.0308043145603	1357.4131674424916	1208.421088505239	795.8299096762374	880.2615633011214	986.3779448656559	1.0735737527007627	1.2061801579003235	0.9658842883985936	1.2219633596596067	1.154761022631843	1.3761592850977324	1.2251095990085477	0.8068204624999284	0.8924181323022309	1.0	9.945996731619418	-9.257577729874365	24.99762522220592	0.8872144659309575	1.1767631789531323	0.5693105503610293	0.10946119367343678	234.877347681134	1520443.2820350039	0.055824872029584645	0.030659349101280726	5.526144923443384e-10	9.257577729874365	0.2895487130221748	
T(ph)T(ph)T(ph)RHS(ph)KTMEELK	ddPTM_K562_Methotrexat_30min_R1	1	TTTRHSKTMEELK	13	2	O76039-1;A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039	O76039-1;A0A669KBC2	CDKL5	Cyclin-dependent kinase-like 5	4	T(0.996)T(0.996)T(0.985)RHS(0.976)KT(0.048)MEELK	42.095	0.033067	26469000.0	140.08	268.33	216.77	421.1	218.48	362.78	419.42	399.78	145.46	302.96	True	False	133.92225092705604	312.666971669849	171.27293933732366	384.18281679992754	247.21394950195221	432.8821006555852	513.4856116112329	385.7195108025388	138.69759634933723	248.0910082575768	0.539810982540783	1.2602914304142259	0.6903633490799558	1.5485559895869159	0.9964647700785916	1.7448520351295917	2.06974696591226	1.554750063339947	0.5590593440828638	1.0	7.9547256373094495	-7.26417662563573	24.983660195127495	1.407754228979861	0.8731688635658875	0.22013062301789232	0.4408420441939482	361.11956214027254	3296053.4727837723	0.12598169650340388	0.19673834795672432	5.4428125105796215e-08	7.26417662563573	-0.5345853654139735	
T(ph)TIFSPEGR	ddPTM_K562_Methotrexat_30min_R1	1	TTIFSPEGR	9	0	H0YLS6;H0YLC2;H0YMI6;H0YMA1;H0YMZ1;H0YL69;P25789	H0YLS6	PSMA4	Proteasome subunit alpha type;Proteasome subunit alpha type-4	1	T(0.803)T(0.01)IFS(0.186)PEGR	99.788	0.020043000000000002	25772000.0	2790.1	2326.4	3578.7	2874.5	2201.1	2195.5	2140.4	2394.8	2293.6	2940.9	True	False	2667.4505447714105	2710.79805796123	2827.5797758291264	2622.4970479491612	2490.583230724766	2619.749302578251	2620.4391852860667	2310.573526614439	2186.97103662065	2408.2745120963427	1.107618974237892	1.1256183812706417	1.1741102443374651	1.0889527065028575	1.0341774653242397	1.0878117463020545	1.0880982097863254	0.9594311258989916	0.9081070391418736	1.0	11.233784134678158	-9.254512346796746	3.976184160628283	0.9470326552459677	1.1024116019827648	0.7459588969572639	0.03883940667917905	0.1142344098203207	4.261503146380008	0.023322358947148184	0.01159762170490507	5.565288121695851e-10	9.254512346796746	0.15537894673679709	
T(ph)TKSPSDSGYSYETIGK	ddPTM_K562_Methotrexat_30min_R1	2	TTKSPSDSGYSYETIGK	17	1	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	T(0.347)T(0.067)KS(0.347)PS(0.238)DSGYSYETIGK;T(0.654)T(0.032)KS(0.085)PS(0.006)DSGY(0.005)S(0.19)Y(0.027)ETIGK	95.624	0.014866999999999998	63627000.0	4918.6	3269.5	8935.6	5990.4	3306.8999999999996	3022.1000000000004	2922.1	3841.5	4122.5	6523.4	True	False	4702.38423336535	3809.7293030021656	7060.139672199051	5465.230932695996	3741.8153131087793	3606.078053892842	3577.4553089723513	3706.3922676170714	3930.8458748119265	5341.949046961566	0.8802750067487086	0.7131721529933147	1.3216411482274941	1.023078072188755	0.7004588175989955	0.6750491294827933	0.6696910205474842	0.6938277087695588	0.735844883628709	1.0	12.383150499862657	-7.762895042289365	24.99937177166762	0.7231591003304206	0.9892366300172941	0.3206567858889007	0.1682477699923575	43.95767198365559	754928.1441596696	0.05236416849835706	0.0626284613292107	1.7262550326443016e-08	7.762895042289365	0.2660775296868735	
T(ph)TPDQELVPASEPVWERPWSVEEIRR	ddPTM_K562_Methotrexat_30min_R1	1	TTPDQELVPASEPVWERPWSVEEIRR	26	2	A0A0A0MR88;A0A096LPC5;Q9Y4E1-5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;A0A0A0MT65	A0A0A0MR88	FAM21C	WASH complex subunit FAM21C	1	T(0.5)T(0.5)PDQELVPASEPVWERPWSVEEIRR	58.903999999999996	0.005895399999999999	13766000.0	902.36	499.01	846.77	975.3	625.75	624.6	765.53	1154.9	996.72	1473.3	True	False	862.6933348553563	581.4629207802757	669.0445487967221	889.796963250936	708.0470931016414	745.2951101755297	937.2195895683251	1114.2815123964492	950.3827047525882	1206.471093431106	0.7150551219606317	0.4819534624129636	0.5545466878066789	0.7375203335543046	0.5868744779354911	0.6177480042691871	0.7768272233551394	0.9235874099789021	0.7877376506798657	1.0	10.236577634228858	-8.928025444243522	2.631079521299474	0.8919906377100745	0.6091762030908365	0.7020458426571252	0.08459520121551169	0.1594440760935562	2.226732060396494	0.042168575687828225	0.025139116950703897	1.180251485599876e-09	8.928025444243522	-0.28281443461923794	
T(ph)TRTPEEGGYSYDISEK	ddPTM_K562_Methotrexat_30min_R1	1	TTRTPEEGGYSYDISEK	17	1	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	T(0.52)T(0.067)RT(0.413)PEEGGYSYDISEK	131.11	0.0006035	27551000.0	1116.4	855.25	1517.5	1245.3	691.3	734.23	701.68	1043.9	1132.9	1283.4	True	False	1067.3243927396159	996.5655257356177	1198.9974878645046	1136.1264824529794	782.2180670573948	876.1095561065948	859.0496017246909	1007.1854453118478	1080.2317262763931	1050.9638235997293	1.015567204857584	0.9482396095445149	1.1408551473805586	1.0810329118290234	0.744286386926398	0.8336248464821282	0.8173921712950122	0.9583445430710136	1.027848630009372	1.0	10.037497294198593	-7.732312299487626	24.99638230409362	0.8876924736082554	1.0461557383425342	0.38083745239307587	0.0929445456351715	229.34472109721187	196818.98373285812	0.029210869518461	0.037704856024464786	1.8521992350852977e-08	7.732312299487626	0.15846326473427874	
T(ph)TSISPALAR	ddPTM_K562_Methotrexat_30min_R1	1	TTSISPALAR	10	0	Q9UKE5-8;Q9UKE5-5;Q9UKE5-7;Q9UKE5-3;Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5	Q9UKE5-8	TNIK	TRAF2 and NCK-interacting protein kinase	1	T(0.999)T(0.001)SISPALAR	169.99	0.00026315	432450000.0	3738.6	3326.5	4402.0	4417.9	3213.2	3264.8	3104.4	3576.5	3580.5	4485.3	True	False	3574.255620473241	3876.1475841678234	3478.080356889325	4030.589566232246	3635.7921207418203	3895.6763940138812	3800.6407245384357	3450.7124678205023	3414.043336510395	3672.9687065543626	0.9731244412986777	1.0553173451358	0.9469398284506856	1.0973656157319591	0.9898783276464618	1.060634245824665	1.0347598981053785	0.9394886653030158	0.9295051521724323	1.0	11.842730889119581	-9.26113931516453	24.999776126171426	0.9508726779659935	1.0240074807732629	0.3075740448197565	0.04528998279625328	28.846992509776964	2403613.9695573933	0.0213436885445784	0.011344370486608902	5.481011140897721e-10	9.26113931516453	0.07313480280726936	
T(ph)TSPPLSIPTTHLIHQPAGSR	ddPTM_K562_Methotrexat_30min_R1	2	TTSPPLSIPTTHLIHQPAGSR	21	0	A0A087WW76;A0A452Q6Z5;Q5T5U3;E7ESW5;A0A1B0GV73;Q5T5U3-3	A0A087WW76	ARHGAP21	Rho GTPase-activating protein 21	1	T(0.361)T(0.361)S(0.279)PPLSIPTTHLIHQPAGSR;T(0.358)T(0.358)S(0.274)PPLS(0.009)IPTTHLIHQPAGSR	136.77	3.9878e-12	166403000.0	1942.29	1789.69	2839.49	2454.07	2144.8900000000003	1828.02	1814.65	2239.72	2034.5700000000002	2414.05	True	False	1856.9092572323789	2085.4058529713866	2243.519852926775	2238.9254932894746	2426.980630479873	2181.258993440717	2221.6314556061297	2160.947778114619	1939.9832847825587	1976.8421523772233	0.9393310715270712	1.054917738608321	1.134900857020305	1.1325767667373374	1.2277058274791146	1.1034057478072667	1.123828451823803	1.0931311716092262	0.9813546733863701	1.0	10.948981963481293	-12.146676466649925	6.584172291197401	0.9999997721332119	1.0954095140906415	0.0965599079467897	0.07767150236394586	2.752518454278828e-07	3.5593787051224426e-08	0.07903166918890196	0.019167949298940765	7.133842771627086e-13	12.146676466649925	0.09540974195742957	
T(ph)TSQAHSLPLS(ph)PASTR	ddPTM_K562_Methotrexat_30min_R1	1	TTSQAHSLPLSPASTR	16	0	P19838-3;P19838;P19838-2	P19838-3	NFKB1	Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit	2	T(0.959)T(0.017)S(0.024)QAHS(0.035)LPLS(0.898)PAS(0.054)T(0.013)R	148.19	1.0495e-21	0.0	1953.6	1632.5	2191.2	2138.9	1953.9	1948.0	1768.8	2217.6	1971.9	2251.2	True	False	1867.7220831745894	1902.242877244544	1731.297064519738	1951.3859578564823	2210.8720978206916	2324.4234303905396	2165.498425964303	2139.6057510523533	1880.2267994036715	1843.4858654259867	1.0131469506781394	1.031872775875599	0.9391431184744535	1.0585304690717345	1.1992888794456855	1.2608848670794768	1.1746759042624428	1.1606304074145641	1.0199301414058821	1.0	10.848220639548925	-7.563991720710368	5.294046458071981	1.151362597358233	0.9980551716443653	0.39451648720674526	0.0774899708938165	0.17469030377137362	11.791972537957971	0.023434634382070316	0.031006950248792586	2.7290298079056838e-08	7.563991720710368	-0.1533074257138678	
T(ph)TSSANNPNLMYQDECDRR	ddPTM_K562_Methotrexat_30min_R1	1	TTSSANNPNLMYQDECDRR	19	1	A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2	A0A1X7SBZ2	DDX17	Probable ATP-dependent RNA helicase DDX17	1	T(0.403)T(0.087)S(0.273)S(0.208)ANNPNLMY(0.029)QDECDRR	75.064	0.0054632	20702000.0	1080.2	744.58	1275.9	945.52	995.4	648.19	788.65	990.37	1020.0	1125.9	True	False	1032.71570139496	867.6091893039764	1008.1060262051534	862.6277296145039	1126.3125473006369	773.4435438115215	965.5248381030914	955.5381257529407	972.5804226338792	921.9885998059337	1.1200959552128225	0.9410194328721597	1.0934040034956465	0.9356164813708927	1.2216122276758201	0.8388862334895693	1.0472199312511254	1.0363882221039054	1.0548725036715143	1.0	9.848605101920525	-8.268015409982588	24.997754218923678	1.000981819651766	1.050293567029646	0.0990188469238511	0.09682167748372077	1754.1729212864045	6668201.715402943	0.032180377620729596	0.02916380701621939	5.394914795092915e-09	8.268015409982588	0.04931174737788013	
T(ph)TT(ph)GHK	ddPTM_K562_Methotrexat_30min_R1	1	TTTGHK	6	0	A0A087X202	A0A087X202	EIF2D		2	T(0.953)T(0.496)T(0.552)GHK	40.778	0.030351999999999997	4120900.0	1045.5	1152.6	1389.9	1307.8	1030.1	1090.5	1285.8	1068.6	1177.1	1421.2	True	False	999.5410718463525	1343.047559149808	1098.1789841073312	1193.14720449049	1165.5762055197772	1301.2236913967577	1574.1733808824629	1031.016732311754	1122.3768779238617	1163.8069082904278	0.858854733311926	1.154012362001421	0.9436092673831086	1.0252106221324648	1.0015202669933867	1.1180752426604754	1.3526070086616364	0.8859001651968746	0.964401285065901	1.0	10.184635999643614	-6.239791098160578	23.590594702738812	1.0519665961546263	0.8588543014892976	0.17114818433525658	0.1257444442725993	4830.4487394229845	5263672.7004867075	0.03225478254627405	1.3542852369434353	5.757167987353703e-07	6.239791098160578	-0.19311229466532864	
T(ph)VDSQGPTPVCTPT(ph)FLER	ddPTM_K562_Methotrexat_30min_R1	1	TVDSQGPTPVCTPTFLER	18	0	H7BZL0;C9J808;Q9BYG3	H7BZL0	NIFK	MKI67 FHA domain-interacting nucleolar phosphoprotein	2	T(0.63)VDS(0.078)QGPT(0.287)PVCT(0.091)PT(0.915)FLER	128.66	5.0548e-06	14151000.0	1841.6	1710.1	2085.6	2032.3	1723.2	1207.0	1377.8	1988.4	1831.0	1977.4	True	False	1760.6454690695775	1992.6649582700736	1647.8610614103534	1854.1314143493057	1949.831004127445	1440.2356675982464	1686.8067228028144	1918.466844964152	1745.8772096496386	1619.2736986022337	1.087305667095919	1.2305918140893373	1.017654435339002	1.1450389245189387	1.2041392420630004	0.8894331260005434	1.0417057500896085	1.1847699660781148	1.0781853686357592	1.0	10.661131143213773														
T(ph)VFSPTLPAAR	ddPTM_K562_Methotrexat_30min_R1	2	TVFSPTLPAAR	11	0	Q7Z2W4-2;Q7Z2W4;C9J6P4;Q7Z2W4-3	Q7Z2W4-2	ZC3HAV1	Zinc finger CCCH-type antiviral protein 1	1	T(0.994)VFS(0.005)PT(0.001)LPAAR;T(0.955)VFS(0.035)PT(0.01)LPAAR	211.63	1.4191e-16	484550000.0	8586.4	7787.5	9213.4	9365.599999999999	6894.4	6109.0	6909.1	7798.9	7722.400000000001	7610.900000000001	True	False	8208.952137065065	9074.252010132848	7279.633248560677	8544.53238903206	7801.134444554463	7289.477790685738	8458.641550672755	7524.608266541398	7363.387309556734	6232.49225887111	1.3171219146531201	1.4559588096105338	1.1680132034177988	1.3709655839315442	1.2516877872492507	1.1695927548582434	1.3571844455375013	1.2073193120827603	1.1814514970437304	1.0	12.605593470466276	-15.99999997098061	0.10044960060288191	0.07095350557428756	1.4722379333677762	0.5700219208306154	0.0816935066656593	132.67872456776718	0.9042976172756785	25.50776654313414	1.3270786602147318	1.000000066819616e-16	15.99999997098061	1.4012844277934886	
T(ph)VHRDSEEEDDYLFDDPLPIPLR	ddPTM_K562_Methotrexat_30min_R1	1	TVHRDSEEEDDYLFDDPLPIPLR	23	1	B3KSJ7;Q96SD1-2;Q96SD1-3;Q96SD1	B3KSJ7	DCLRE1C	Protein artemis	1	T(0.558)VHRDS(0.44)EEEDDY(0.002)LFDDPLPIPLR	63.823	0.006717100000000001	3705800.0	1004.3	600.45	996.28	1083.7	1034.6	851.64	887.17	985.27	1065.4	1136.6	True	False	960.1521745148652	699.6641565950908	787.1744429717616	988.6937035527931	1170.6680343954586	1016.2073769290548	1086.1404559943196	950.6174956436472	1015.8697865432691	930.7507261208142	1.0315889610063378	0.7517202371801023	0.845741422359722	1.062254023344654	1.2577675220029885	1.0918147559920872	1.1669509628223866	1.021344887481994	1.0914520483666066	1.0	9.862251026363722	-7.331202405595528	4.701009457009228	1.1117542952184547	0.8637238000941748	0.5422229597025565	0.09365294093915723	0.14757569742433213	6.298823770648371	0.026256191260796407	0.04021253403329948	4.6644194153347526e-08	7.331202405595528	-0.24803049512427988	
T(ph)VSEPNLK	ddPTM_K562_Methotrexat_30min_R1	1	TVSEPNLK	8	0	J3KPH8;Q8WUI4-8;Q8WUI4-5;Q8WUI4-6;Q8WUI4-7;Q8WUI4;Q8WUI4-4;Q8WUI4-3;F8VWY3;C9JEB6;H0YI41;C9JAH2;C9JF80	J3KPH8	HDAC7	Histone deacetylase;Histone deacetylase 7	1	T(0.958)VS(0.042)EPNLK	125.97	0.0044006	38216000.0	3453.4	2402.7	5334.9	3526.7	2582.3	1972.9	2514.4	3359.4	3187.2	4062.7	True	False	3301.5926709844043	2799.70533608298	4215.1773957221385	3217.5196865549838	2921.9177123713425	2354.1350029863943	3078.318205701404	3241.247997873953	3039.0277676653886	3326.905661632088	0.9923914311909686	0.8415343327497666	1.2669963697300297	0.967120806478341	0.8782688809209969	0.7076049766411232	0.9252796799147187	0.9742530529957637	0.9134697754472922	1.0	11.699965242128675	-7.526513077278094	16.64427861618191	0.8931407386258249	1.0315333228595582	0.1965594977620777	0.12131097765012508	2.717869984897083	12435.586821405206	0.03674222914330605	0.048114856167854304	2.9749996756937564e-08	7.526513077278094	0.13839258423373335	
T(ph)VSPCQVQASCSQEENR	ddPTM_K562_Methotrexat_30min_R1	1	TVSPCQVQASCSQEENR	17	0	Q711Q0-3;Q711Q0	Q711Q0-3	C10orf71	Uncharacterized protein C10orf71	1	T(0.889)VS(0.111)PCQVQASCSQEENR	103.87	0.0024969000000000002	5676100.0	929.23	695.74	821.69	875.39	619.49	712.05	755.08	901.5	787.92	1001.5	True	False	888.3821618285858	810.6992094420325	649.2284980582432	798.645917830654	700.9637933768051	849.6435850151869	924.4259110567198	869.7937340249362	751.2897711781231	820.1186452665803	1.0832361475452328	0.9885145449638131	0.7916275307302773	0.9738175353531359	0.8547102268952271	1.0360008151491416	1.1271855802720279	1.0605706126120433	0.9160744917998002	1.0	9.679688827012463	-8.345394230795183	11.455238646965075	1.0380742904243525	0.9350013352253518	0.19970820372108322	0.08839131166464584	1.207179683278511	161.35107477187768	0.03211467969230896	0.028315603258714305	4.514459582736053e-09	8.345394230795183	-0.10307295519900073	
T(ph)VSPPTVCTIPTVVGR	ddPTM_K562_Methotrexat_30min_R1	3	TVSPPTVCTIPTVVGR	16	0	Q9BWT3-2;Q9BWT3;A0A0C4DH56	Q9BWT3-2	PAPOLG	Poly(A) polymerase gamma	1	T(0.902)VS(0.069)PPT(0.009)VCT(0.019)IPTVVGR;T(0.931)VS(0.067)PPT(0.002)VCTIPTVVGR;T(0.996)VS(0.004)PPTVCTIPTVVGR	190.34	1.5249e-08	73253000.0	3870.1499999999996	3282.8399999999997	4431.299999999999	4759.1	3664.73	3403.14	3221.9	3689.7	3841.36	4207.6	True	False	3700.0228399867638	3825.273511260936	3501.230687297515	4341.877091979421	4146.70623012765	4060.748641118721	3944.4930905780125	3559.9311596581306	3662.776012047916	3445.562867522379	1.0738514960394152	1.110202790759583	1.0161563790635941	1.26013579171799	1.203491675979619	1.1785443473967745	1.1448036916576136	1.0331929198604324	1.063041410903563	1.0	11.750523965661792	-9.260921941085167	24.28635610055356	1.0360878673422496	1.1434649834287098	0.3680520285033111	0.06530293705333794	37.99845193323787	1783647.3436791345	0.035642740977937064	0.018940517557408137	5.483755195954202e-10	9.260921941085167	0.10737711608646028	
T(ph)VT(ph)RS(ph)KY(ph)QR	ddPTM_K562_Methotrexat_30min_R1	1	TVTRSKYQR	9	2	A0A087X0N3;Q5W149	A0A087X0N3	NOL4L		4	T(1)VT(1)RS(1)KY(1)QR	62.466	0.025382	21688000.0	0.0	0.0	0.0	0.0	0.0	0.0	46.992	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	57.53115221218598	0.0	0.0	0.0											0.0														
T(ph)VY(ph)PDPR	ddPTM_K562_Methotrexat_30min_R1	1	TVYPDPR	7	0	H0YDH4;Q96Q83	H0YDH4	ALKBH3	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3	2	T(1)VY(1)PDPR	102.98	0.024682	13630000.0	158.37	97.26	191.27	220.9	149.92	181.07	155.41	152.4	182.78	178.15	True	False	151.4082444268837	113.33056186266728	151.12504085920506	201.53403996937539	169.63710778713235	216.05921485668134	190.2646485634964	147.04000561885772	174.28259769511797	145.88530869120453	1.0378580666225246	0.7768469826016142	1.0359167911766323	1.3814553485708594	1.162811453113509	1.4810210623333837	1.3042070532696999	1.0079151008282632	1.1946548919742288	1.0	7.188690794445693	-7.027800735721282	6.629411968713676	1.2303573242625612	0.9059282064320716	0.40880562594862124	0.15285874985851203	0.15882055291549207	25.81847691860026	0.041560435970982926	0.07632220576120267	9.379922806011362e-08	7.027800735721282	-0.32442911783048956	
T(ph)YS(ph)RRTSS(ph)HSSS(ph)Y(ph)RDLR	ddPTM_K562_Methotrexat_30min_R1	1	TYSRRTSSHSSSYRDLR	17	3	Q9BYW2;H7BZ93;C9JG86;H7BXT4;H7C3H4;Q9BYW2-3;Q9BYW2-2	Q9BYW2	SETD2	Histone-lysine N-methyltransferase SETD2	5	T(0.447)Y(0.423)S(0.563)RRT(0.405)S(0.184)S(0.803)HS(0.274)S(0.386)S(0.643)Y(0.87)RDLR	53.861000000000004	0.02441	29474000.0	3002.3	2388.1	3360.4	2927.1	2193.9	2471.0	2556.8	2645.5	2410.0	3497.6	True	False	2870.3224868525153	2782.692934240548	2655.097962583116	2670.4856876159274	2482.436304523677	2948.485778488206	3130.22748502122	2552.456265516327	2297.9596260271064	2864.1507475630465	1.002154823482919	0.9715595230482171	0.9270105509782255	0.932383077213412	0.8667268322506593	1.0294450391610552	1.0928989990085418	0.8911738558761534	0.8023179743532417	1.0	11.483891711984297	-9.483321920506512	24.996925427733625	0.8830211071080433	0.97063338032986	0.17840370495044433	0.07332244985421678	783.3205559110929	495001.63032248925	0.04132375246862192	0.019846061662797766	3.2860796013679755e-10	9.483321920506512	0.08761227322181675	
T(ph)YSAPAINAIQGGSFESPKK	ddPTM_K562_Methotrexat_30min_R1	1	TYSAPAINAIQGGSFESPKK	20	1	Q9H4L5-7;Q9H4L5-5;Q9H4L5-3;Q9H4L5	Q9H4L5-7	OSBPL3	Oxysterol-binding protein-related protein 3	1	T(0.496)Y(0.009)S(0.496)APAINAIQGGSFESPKK	106.02	0.00019453	7382900.0	1312.2	909.88	1565.5	1152.9	783.81	569.2	621.57	1069.8	1078.2	1912.8	True	False	1254.5172591839155	1060.222204684389	1236.922943823316	1051.827046992725	886.8947535661168	679.1898442393718	760.9728949720901	1032.1745276315876	1028.074717337106	1566.3733845890324	0.8009056279471077	0.6768642873503359	0.7896731111451093	0.6715046727308199	0.566209029272296	0.4336066042245541	0.48581832560424004	0.6589581627131631	0.6563407725462859	1.0	10.613212441024022	-12.048524884901752	4.573175869074413	1.0000148619436644	0.6324198815682044	0.48867425971294975	0.11103965636551254	202718442.4190531	238713881.92219746	43142.14356386157	0.031339300506447	8.942832883863316e-13	12.048524884901752	-0.36759498037546	
T(ph)YSDTDSCSDIPLEDPDRPVHCSK	ddPTM_K562_Methotrexat_30min_R1	1	TYSDTDSCSDIPLEDPDRPVHCSK	24	1	Q9HB20	Q9HB20	PLEKHA3	Pleckstrin homology domain-containing family A member 3	1	T(0.49)Y(0.002)S(0.427)DT(0.079)DS(0.001)CS(0.001)DIPLEDPDRPVHCSK	73.072	0.001068	10610000.0	1990.9	1528.7	3011.0	2083.2	1434.7	1450.3	1336.5	1945.6	1809.1	2416.8	True	False	1903.3824198363495	1781.2916915428689	2379.0322477496015	1900.5690903766533	1623.3881973198952	1730.5499492276188	1636.2441464842227	1877.1721452234226	1724.9953358695582	1979.0941007291776	0.9617442743804183	0.9000540655881747	1.2020814204201158	0.9603227505333918	0.8202683221185764	0.8744151925823106	0.8267641977616753	0.9485007026860406	0.8716085481908115	1.0	10.950624495040334	-7.526856257122333	24.280945456466757	0.8843155179301159	1.021174785567696	0.3134966620260463	0.08723860590494657	90.25698032412163	550972.6880669949	0.02559067333261587	0.033199899217414675	2.9726497571652005e-08	7.526856257122333	0.13685926763758016	
T(ph)YTHEVVTLWYR	ddPTM_K562_Methotrexat_30min_R1	1	TYTHEVVTLWYR	12	0	G3V5T9;P24941;Q00526;K7EJ83	G3V5T9	CDK2;CDK3	Cyclin-dependent kinase 2;Cyclin-dependent kinase 3	1	T(1)YTHEVVTLWYR	104.59	0.010487999999999999	7473800.0	995.73	763.37	1045.9	947.56	741.97	740.06	949.8	1271.9	1179.6	1178.7	True	False	951.958901453437	889.5039174285861	826.3798830691832	864.4888859818072	839.5520601975629	883.066121095905	1162.8168277820532	1227.1665560802178	1124.7606534695328	965.2260081634734	0.9862549220619535	0.9215498856283794	0.8561516951263348	0.8956336429709993	0.869798423474903	0.9148801561782477	1.204709381997004	1.271377424252312	1.1652821659971684	1.0	9.914722979492236	-8.757086497849857	23.800266736647842	1.1829570771679658	0.9034517315467474	0.7413986925587444	0.07267908896630289	26.629613938965026	145604.61689511765	0.027682253502887683	0.020655275055620453	1.7494982087093713e-09	8.757086497849857	-0.2795053456212184	
TAADVVS(ph)PGANSVDSR	ddPTM_K562_Methotrexat_30min_R1	1	TAADVVSPGANSVDSR	16	0	Q01804-5;Q01804-3;Q01804	Q01804-5	OTUD4	OTU domain-containing protein 4	1	TAADVVS(1)PGANSVDSR	191.41	1.57e-09	59579000.0	4951.3	3919.9	5805.6	4721.5	4025.0	3907.7	3543.0	4370.7	4495.5	5039.1	True	False	4733.6467805192215	4567.5968480924275	4587.083898218231	4307.573425601658	4554.358049914671	4662.8077201935885	4337.60793938915	4216.980003663658	4286.505186226082	4126.470160122641	1.1471418904865012	1.1069017031148667	1.1116241533858326	1.0438881800792266	1.1036934409285328	1.1299749033093718	1.0511666802554156	1.0219339629341528	1.0387825477692743	1.0	12.010692492467697	-8.94006478225343	4.59019775243881	1.0247527538616517	1.1041590896040576	0.6880445683767749	0.026608020406001492	0.13260551986740357	5.673407327407756	0.012302487416365682	0.0079954596036101	1.1479823680392573e-09	8.94006478225343	0.07940633574240596	
TAAILHGGS(ph)PDFVGNGK	ddPTM_K562_Methotrexat_30min_R1	1	TAAILHGGSPDFVGNGK	17	0	H0YME5;Q9P2K8-2;Q9P2K8;Q9P2K8-3	H0YME5	EIF2AK4	Eukaryotic translation initiation factor 2-alpha kinase 4	1	TAAILHGGS(1)PDFVGNGK	91.926	0.0038760999999999995	6800000.0	1679.9	1637.4	2701.7	1794.7	1628.8	1564.5	1376.2	1681.3	1737.1	2282.8	True	False	1606.0536074554634	1907.9525189587837	2134.650090915013	1637.3614374515064	1843.0157494909374	1866.8174829804932	1684.847882073765	1622.1677260300878	1656.3426001542255	1869.3627992157253	0.8591449493534744	1.0206432479341347	1.1419132186703334	0.8758928112501474	0.9859058660331522	0.9986384043609405	0.9012952877743304	0.8677650623574268	0.8860466255395311	1.0	10.868330873988842	-8.766677329861395	24.643098176016515	0.9027571415978821	0.9850350312931637	0.1339655553414707	0.08049028383288663	189.93040017812314	893555.190654841	0.033231934309086254	0.023165382478980527	1.7112862865822593e-09	8.766677329861395	0.0822778896952816	
TAAPSPS(ph)LLYK	ddPTM_K562_Methotrexat_30min_R1	1	TAAPSPSLLYK	11	0	Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3	Q9BTC0	DIDO1	Death-inducer obliterator 1	1	T(0.001)AAPS(0.412)PS(0.588)LLYK	101.39	0.006293	10491000.0	3239.0	2097.1	4522.9	3245.3	2285.6	2388.2	2341.4	3031.4	3147.5	4044.6	True	False	3096.617438269091	2443.6101303948135	3573.60509908558	2960.7895876533003	2586.1964618347765	2849.685850338135	2866.51855187292	2924.7839437861226	3001.1734120001292	3312.0837470246734	0.9349453923231437	0.7377863354421423	1.0789597643162971	0.8939356048327736	0.780836675448808	0.860390638641936	0.8654728475534426	0.8830646104324893	0.9061284802040883	1.0	11.693523436934612	-10.239035170994658	1.9806980540993506	0.999928078871064	0.8772153248047301	0.15090326880596083	0.08572152037222716	1.8470927883734825	11.721526791166939	0.08154600897897236	0.022658529482024212	5.767197563083027e-11	10.239035170994658	-0.12271275406633397	
TAEISSTALRSS(ph)PIMR	ddPTM_K562_Methotrexat_30min_R1	3	TAEISSTALRSSPIMR	16	1	A0A087WZV0;O43314-2;O43314;K7ENU7;A0A087WWN8;H0Y9S9	A0A087WZV0	PPIP5K2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2	1	TAEISS(0.002)T(0.001)ALRS(0.17)S(0.827)PIMR;TAEISSTALRS(0.053)S(0.947)PIMR;TAEISST(0.001)ALRS(0.212)S(0.787)PIMR	82.837	0.027108999999999998	314445000.0	12408.300000000001	10914.1	14573.7	13579.900000000001	10954.5	10064.7	11194.0	13091.8	12512.2	15021.9	True	False	11862.845989278909	12717.469517019714	11514.879531394346	12389.371251154922	12395.20875969945	12009.560831546038	13704.539450613081	12631.353973497116	11930.510553019227	12301.288344812821	0.9643580133036396	1.0338323239437264	0.9360710202561762	1.0071604618860304	1.0076350063712012	0.9762848000071636	1.1140735072999064	1.0268317935026274	0.9698586211947513	1.0	13.586521800100668														
TAENATSGETLEENEAGD	ddPTM_K562_Methotrexat_30min_R1	2	TAENATSGETLEENEAGD	18	0	Q9UQ80;Q9UQ80-2	Q9UQ80	PA2G4	Proliferation-associated protein 2G4	0	;	169.09	2.7729e-11	17229200.0	5725.1	4663.6	6427.7	5748.5	4935.5	4606.9	4555.8	5128.799999999999	5681.9	6442.0	False	True	5473.4314590411805	5434.180632353844	5078.613609717745	5244.537930122023	5584.604759094129	5497.11822457196	5577.554120877534	4948.4171969684885	5417.749709179835	5275.291375743694	1.0375600263918225	1.030119522371928	0.9627171748407506	0.9941702849319228	1.0586343694251068	1.042050160460946	1.0572978293717905	0.9380367537083915	1.0270048274662473	1.0	12.36503506658257	-9.245593280739104	24.935979842754005	0.9868905830654893	1.0244361367831145	0.20274258654738553	0.034142585648405985	1290.524711578061	2030820.0375608846	0.01693936437485097	0.009745492210893788	5.680763631287922e-10	9.245593280739104	0.037545553717625246	
TAFYNEDDS(ph)EEEQR	ddPTM_K562_Methotrexat_30min_R1	3	TAFYNEDDSEEEQR	14	0	Q8WWQ0	Q8WWQ0	PHIP	PH-interacting protein	1	TAFYNEDDS(1)EEEQR;TAFYNEDDS(1)EEEQR;TAFY(0.004)NEDDS(0.996)EEEQR	174.18	3.068e-08	53858000.0	5328.81	4939.51	7666.4	5639.4400000000005	5423.8099999999995	4780.24	4616.3	6022.4	5800.98	6103.1	True	False	5094.56189293693	5755.680070185723	6057.327407554813	5145.039050995446	6137.136083157192	5703.953726329609	5651.622785944719	5810.588778471186	5531.29370597125	4997.76944975184	1.019367128507678	1.1516497765761318	1.2120061696434568	1.029467065802909	1.2279750286324085	1.14129989061677	1.13082903138426	1.1626364194850376	1.1067524745956223	1.0	12.287068635192062	-10.083056213413638	6.551567567648883	1.0000015300550245	1.1372049127708	0.2862431968215957	0.0634365499517809	1.3268425345745791	103.89617964388387	0.05830517655498129	0.015110866848949304	8.259310373094471e-11	10.083056213413638	0.13720338271577548	
TAHNSEAADLEES(ph)FNEHELEPSSPK	ddPTM_K562_Methotrexat_30min_R1	1	TAHNSEAADLEESFNEHELEPSSPK	25	0	Q5JRC6;A0A0D9SGE8;Q8IWS0-2	Q5JRC6	PHF6	PHD finger protein 6	1	T(0.011)AHNS(0.008)EAADLEES(0.976)FNEHELEPS(0.001)S(0.003)PK	57.227	0.006193199999999999	12103000.0	2647.1	1909.2	4293.0	3139.1	2047.9	1973.6	1868.7	2472.7	2898.3	3196.1	True	False	2530.7366535480437	2224.662849148718	3391.957967316187	2863.8999767671608	2317.234745446026	2354.970268079451	2287.803543984337	2385.7337394602973	2763.5586656076184	2617.25531915778	0.9669429784032009	0.8499984059119627	1.2959981177563153	1.0942379048020237	0.8853682437797856	0.8997862191134143	0.8741231805846673	0.911540315534831	1.055899531611963	1.0	11.353838954067376	-7.76047887684863	24.999992658412598	0.9282801050468186	1.0548234894081687	0.18299139667198228	0.11691535524581861	44.223133811747665	1151019.6875529813	0.03730659470237796	0.04542585148664227	1.735885690572086e-08	7.76047887684863	0.12654338436135015	
TAHNSEADLEES(ph)FNEHELEPSS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	TAHNSEADLEESFNEHELEPSSPK	24	0	Q8IWS0-5;Q8IWS0	Q8IWS0-5	PHF6	PHD finger protein 6	2	TAHNSEADLEES(1)FNEHELEPS(0.391)S(0.609)PK	101.22	2.7562e-06	13098000.0	2251.7	1710.0	3517.9	2425.8	1715.4	1720.0	1538.9	1841.7	2113.1	2486.8	True	False	2152.7179641094517	1992.5484349697833	2779.540864947968	2213.1338802974683	1941.005167409597	2052.3656572236796	1884.037498708994	1776.9263671145018	2014.8624422231846	2036.4164224153094	1.05711088381236	0.9784582431360006	1.3649177223051805	1.0867786450438077	0.9531474732007175	1.00783201050277	0.9251730038959394	0.8725751509148423	0.989415730518142	1.0	10.991816889849838	-7.696177567991298	4.5595947911056856	0.9520374210330895	1.1334254149708392	0.40019451193021804	0.09890336875187665	0.21320652187900999	8.66055171408143	0.030910057033072282	0.0396409811869109	2.012901075966967e-08	7.696177567991298	0.18138799393774963	
TAHNSEADLEES(ph)FNEHELEPSSPK	ddPTM_K562_Methotrexat_30min_R1	1	TAHNSEADLEESFNEHELEPSSPK	24	0	Q8IWS0-5;Q8IWS0	Q8IWS0-5	PHF6	PHD finger protein 6	1	TAHNSEADLEES(0.738)FNEHELEPS(0.042)S(0.22)PK	68.291	0.0022263	66623000.0	3183.9	2114.0	4986.5	3964.0	2641.0	2523.7	2056.7	3138.7	2973.8	4295.0	True	False	3043.9395682942168	2463.3025681439285	3939.901794554433	3616.4822745070337	2988.3377912607843	3011.3693076368636	2517.967329647661	3028.3101419679024	2835.5486870868913	3517.133880599066	0.8654602502011521	0.700372135883653	1.1202023944233133	1.0282469753158916	0.8496514186579065	0.8561997950228564	0.7159145529082848	0.8610164539577029	0.8062100515218142	1.0	11.780184537225582	-7.972655353584522	24.875585637402764	0.8333780070275222	0.9275824344964463	0.08997365271652702	0.12095571564688111	479.66904826760907	436355.65322374756	0.03921919890222251	0.044469403656754114	1.0649878335607039e-08	7.972655353584522	0.0942044274689241	
TAHNSEADLEESFNEHELEPSS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	TAHNSEADLEESFNEHELEPSSPK	24	0	Q8IWS0-5;Q8IWS0	Q8IWS0-5	PHF6	PHD finger protein 6	1	TAHNSEADLEES(0.319)FNEHELEPS(0.239)S(0.442)PK;TAHNSEADLEES(0.009)FNEHELEPS(0.102)S(0.889)PK	114.84	3.4954e-08	89381000.0	5947.4	4747.9	9190.1	7211.200000000001	5109.4	4849.3	3772.0	5391.6	5292.1	7134.0	True	False	5685.959417215682	5532.40977449885	7261.2236001473375	6579.005292110273	5781.375657201	5786.358593938831	4617.967018734368	5201.9743720120305	5046.071426098772	5841.963470126598	0.9732959554251484	0.9470120453147853	1.2429423150757881	1.1261633739670927	0.9896288613861728	0.9904818172054469	0.7904820087199715	0.8904496576558192	0.8637629201042267	1.0	12.512237621666568	-8.350491361212093	2.1864609144891385	0.8795287074732795	1.0701824321594549	0.4134448737173376	0.09369468960344886	0.3082565228530646	2.893761555752607	0.039926158362887626	0.034633998269783355	4.461784996720668e-09	8.350491361212093	0.19065372468617536	
TALAT(ph)SPITVGDLGIVR	ddPTM_K562_Methotrexat_30min_R1	1	TALATSPITVGDLGIVR	17	0	P13994	P13994	CCDC130	Coiled-coil domain-containing protein 130	1	TALAT(0.566)S(0.408)PIT(0.027)VGDLGIVR	122.75	0.00049105	5311400.0	1250.3	1151.9	1771.2	1836.4	1541.9	1183.1	1239.2	1547.3	1806.5	1531.5	True	False	1195.3383090669488	1342.2318960477737	1399.4493248801386	1675.4056631949334	1744.6868763138973	1411.7173308496144	1517.122144648896	1492.8805819820109	1722.5162093020597	1254.1305094615757	0.9531211465225675	1.0702489780142752	1.115872163480778	1.3359101389808465	1.3911525659820905	1.1256542442745405	1.2097003726511908	1.190370994660624	1.3734744480792287	1.0	10.292471772798713	-6.814665723427971	2.2056279265227396	1.240128215366837	0.9836520650588202	0.37709152795516543	0.11442197113972302	0.3198319338363252	3.0311729619181595	0.031491686202667415	0.10339064168035696	1.5322663937405966e-07	6.814665723427971	-0.25647615030801674	
TALATS(ph)PITVGDLGIVR	ddPTM_K562_Methotrexat_30min_R1	1	TALATSPITVGDLGIVR	17	0	P13994	P13994	CCDC130	Coiled-coil domain-containing protein 130	1	TALAT(0.19)S(0.779)PIT(0.03)VGDLGIVR	85.469	0.010504000000000001	4250900.0	940.75	824.44	1176.3	1049.3	834.59	786.54	901.45	1071.3	889.64	1105.3	True	False	899.3957564222445	960.6646969160743	929.4107050906202	957.3094981433482	944.3532136343564	938.527723274834	1103.623109501086	1033.6217717813793	848.2808305803962	905.1194594240158	0.993676301020626	1.0613678525124246	1.026837612884892	1.0576609398637216	1.043346492887588	1.0369103365340062	1.2193121007511987	1.1419727650526237	0.9372031743966819	1.0	9.821964404230235														
TALIHDGLAR	ddPTM_K562_Methotrexat_30min_R1	2	TALIHDGLAR	10	0	P25398	P25398	RPS12	40S ribosomal protein S12	0	;	120.27	0.0051421999999999995	28330000.0	8882.0	5589.9	7786.9	8972.900000000001	6818.1	6062.4	7017.4	10160.6	9526.0	12052.3	False	True	8491.55791500651	6513.535962945955	6152.536104284753	8186.259788325979	7714.799657173472	7233.873000205138	8591.230582520304	9803.245938917102	9083.138339225814	9869.511680825166	0.8603827818051228	0.6599653735250836	0.6233880969246043	0.8294493236408577	0.781679976341895	0.7329514604313565	0.8704818293301835	0.9932858135183317	0.9203229737164053	1.0	13.268762990105667	-8.953487046553052	2.863743678787439	0.9670826488003585	0.742829668380753	0.6746568067530306	0.06975488492436588	0.16417574904698384	2.726866767543664	0.035911915091300206	0.021377460868346645	1.1130455904651152e-09	8.953487046553052	-0.2242529804196055	
TALPTSGS(ph)SAGELELLAGEVPAR	ddPTM_K562_Methotrexat_30min_R1	2	TALPTSGSSAGELELLAGEVPAR	23	0	Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1	Q9Y6I3-3	EPN1	Epsin-1	1	TALPTS(0.001)GS(0.913)S(0.086)AGELELLAGEVPAR;TALPTS(0.056)GS(0.92)S(0.024)AGELELLAGEVPAR	209.23	6.1583e-34	47593000.0	7933.9	5739.2	6273.5	9051.0	5810.9	5455.3	6104.3	6702.799999999999	8713.9	8095.3	True	False	7585.135255783626	6687.505250279872	4956.778082450058	8257.512882584051	6575.135203043268	6509.459517356012	7473.344663960817	6467.058724816793	8308.792690969954	6629.162724939139	1.1442071299966867	1.0088008890053712	0.7477230968855973	1.2456343621674881	0.991850023277809	0.9819429372079224	1.12734367431438	0.9755468364786846	1.2533698501187776	1.0	12.694610951552443	-8.758417517852665	24.973267762727012	1.0870273248540314	1.0161128964188864	0.05566307105635482	0.13864630141002332	264.4475336110463	2185469.6896665324	0.05379154275385455	0.039831524571479066	1.7441445777224046e-09	8.758417517852665	-0.07091442843514506	
TALPTSGSS(ph)AGELELLAGEVPAR	ddPTM_K562_Methotrexat_30min_R1	1	TALPTSGSSAGELELLAGEVPAR	23	0	Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1	Q9Y6I3-3	EPN1	Epsin-1	1	TALPTSGS(0.004)S(0.996)AGELELLAGEVPAR	196.76	6.0329e-23	52722000.0	2989.6	2342.1	3160.4	3094.9	2213.1	2656.1	2557.3	3094.0	2934.2	3440.9	True	False	2858.1807636459625	2729.092216106859	2497.075229421402	2823.574922142235	2504.161441059916	3169.353733809196	3130.8396227490457	2985.1822663041053	2797.789682443459	2817.719666997282	1.0143595181318368	0.9685463916341723	0.8862042802442529	1.0020780119518395	0.888719154850663	1.124793843379968	1.1111253044151983	1.059431958852486	0.9929269100871694	1.0	11.460312370706147	-8.262435429905036	24.9999038345979	1.0647119566311323	0.9520305977872235	0.478653030013674	0.0548967221144309	77.86676096721996	1954346.5720826278	0.01891688035366108	0.017644289193369887	5.464677916560712e-09	8.262435429905036	-0.11268135884390873	
TALPTSGSSAGELELLAGEVPARS(ph)PGAFDMSGVR	ddPTM_K562_Methotrexat_30min_R1	2	TALPTSGSSAGELELLAGEVPARSPGAFDMSGVR	34	1	Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1	Q9Y6I3-3	EPN1	Epsin-1	1	TALPTSGSSAGELELLAGEVPARS(0.963)PGAFDMS(0.036)GVR;TALPTSGSSAGELELLAGEVPARS(0.984)PGAFDMS(0.016)GVR	94.57	4.8678999999999995e-08	408280000.0	3001.2	2481.1000000000004	3100.1	3454.7	2815.5	2449.8	2547.5	3086.3	3112.1000000000004	3683.6	True	False	2869.270841535411	2891.0596035108347	2449.4313753731467	3151.831814767773	3185.787599884412	2923.189178527077	3118.8417232836173	2977.7530796685087	2967.419150273426	3016.4643451861975	0.9512033006835687	0.9584265791586467	0.8120206622969218	1.0448762040889363	1.0561330204245336	0.9690779813764505	1.0339395286606978	0.9871666755884365	0.983740833870276	1.0	11.558642814373744	-7.289894026344118	24.99271200187579	1.0112966671986154	0.912337775248588	0.5210295779753455	0.045387704057497806	565.2128695510033	496444.5827601433	0.012853000632629277	0.019067634425271353	5.129865442908037e-08	7.289894026344118	-0.0989588919500275	
TAMRVS(ph)PHHPAPTPNPR	ddPTM_K562_Methotrexat_30min_R1	1	TAMRVSPHHPAPTPNPR	17	1	A8MZI9;Q01196-7;Q01196-3;Q01196-4;Q01196-11;Q01196;Q01196-9;Q01196-10;Q01196-2;Q01196-8	A8MZI9	RUNX1	Runt-related transcription factor 1	1	T(0.005)AMRVS(0.995)PHHPAPTPNPR	73.21	0.011819	27744000.0	1623.7	1187.9	1806.4	1686.7	1196.1	1297.8	1276.8	1814.9	1481.4	1644.0	True	False	1552.3240921634833	1384.1802841524	1427.2613259166008	1538.8296297706893	1353.40811515601	1548.5814825261004	1563.1549017815598	1751.0689383048864	1412.530037342969	1346.2556693142872	1.153067821771296	1.028170440208753	1.0601710792746921	1.1430441221870504	1.0053128436186016	1.1502878077496732	1.1611129575244425	1.3006956837528418	1.0492286640192487	1.0	10.394736704881439	-8.4510271811444	19.355612478803017	1.153229195003506	1.0778127277341993	0.06544063498146901	0.08605469039271872	30.92565412134164	8329.473690894309	0.029004311847788202	0.025579397859158866	3.5397518618129933e-09	8.4510271811444	-0.07541646726930673	
TANSPGS(ph)GARPDPVR	ddPTM_K562_Methotrexat_30min_R1	1	TANSPGSGARPDPVR	15	1	A0A3B3ISR7;E9PIF2;Q13206	A0A3B3ISR7	DDX10	Probable ATP-dependent RNA helicase DDX10	1	T(0.005)ANS(0.349)PGS(0.646)GARPDPVR	98.552	0.0087691	3270200.0	1459.2	1327.6	2221.4	1904.7	1321.8	1313.7	1031.6	1616.8	1743.9	1376.4	True	False	1395.055315196746	1546.9633346584105	1755.1584972271555	1737.7179082375253	1495.6398684166995	1567.553932496948	1262.962560054713	1559.9362275890371	1662.8264696384524	1127.120622411304	1.2377160771064912	1.372491376609645	1.5572055575314196	1.5417319794219901	1.3269563511463434	1.390759694506701	1.1205212068188368	1.3840011411128204	1.4752870602980244	1.0	10.138426203049374	-8.289664136052867	2.2895665166285233	1.2797142293132708	1.4276610392008504	0.17929886980438925	0.15324437208317332	0.6113746718558372	6.300749525182357	0.06119912371887138	0.055398415726248505	5.132581614752554e-09	8.289664136052867	0.14794680988757958	
TAPAAPAEDAVAAAAAAPS(ph)EPSEPSRPSPQPKPR	ddPTM_K562_Methotrexat_30min_R1	1	TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPR	34	2	Q53GA4	Q53GA4	PHLDA2	Pleckstrin homology-like domain family A member 2	1	TAPAAPAEDAVAAAAAAPS(0.381)EPS(0.381)EPS(0.119)RPS(0.119)PQPKPR	44.263999999999996	0.012163	28071000.0	761.35	662.58	972.14	892.92	572.2	659.42	725.78	947.56	842.18	1094.7	True	False	727.8819656147498	772.0600830656596	768.1010990791432	814.6390899477349	647.4543294810373	786.8435823758368	888.5546402059992	914.2337777178788	803.0272356213723	896.4392221401152	0.8119702347215909	0.8612520112880392	0.8568356672808404	0.9087499406852204	0.7222512285164593	0.8777433683650798	0.9912045549331356	1.0198502643997231	0.8957966315934551	1.0	9.80806196261803	-8.65117489988099	4.626486485166242	0.9779344242541721	0.8361629059300727	0.6122118128232538	0.05417541778624371	0.14741600147196965	5.321332356065153	0.021283344642341096	0.016138978491949126	2.232672895574862e-09	8.65117489988099	-0.1417715183240994	
TAPPALPT(ph)GYDSEEEEESRPMSYDEKR	ddPTM_K562_Methotrexat_30min_R1	1	TAPPALPTGYDSEEEEESRPMSYDEKR	27	2	A0A0G2JHN8;A0A140T9I1;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440-4;P25440-3;P25440;P25440-2	A0A0G2JHN8	BRD2	Bromodomain-containing protein 2	1	T(0.001)APPALPT(0.438)GY(0.4)DS(0.106)EEEEES(0.008)RPMS(0.024)Y(0.023)DEKR	40.285	0.02617	138790000.0	3366.4	2088.9	4979.8	3905.8	2605.7	2264.5	2188.1	3002.5	3011.9	4136.3	True	False	3218.417086813546	2434.0552197709817	3934.608032993513	3563.384578145705	2948.395222524886	2702.082576036642	2678.837124520857	2896.9003731667995	2871.877426402921	3387.1759884335083	0.950177108542267	0.7186090206362962	1.1616190143143934	1.0520222717431607	0.8704582320472966	0.797739056152879	0.7908762738247203	0.8552553463590623	0.8478677919924377	1.0	11.725867231944186	-7.9381771334086775	9.062929855270896	0.8438658056136205	0.9660079721270156	0.1708963645374495	0.11686826678251425	0.5551519908316235	75.57987718920752	0.037582319568606484	0.04263195364747968	1.1529829008282697e-08	7.9381771334086775	0.12214216651339516	
TAPPALPTGYDS(ph)EEEEESRPMSYDEKR	ddPTM_K562_Methotrexat_30min_R1	2	TAPPALPTGYDSEEEEESRPMSYDEKR	27	2	A0A0G2JHN8;A0A140T9I1;H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440-4;P25440-3;P25440;P25440-2	A0A0G2JHN8	BRD2	Bromodomain-containing protein 2	1	TAPPALPT(0.026)GY(0.187)DS(0.713)EEEEES(0.018)RPMS(0.029)Y(0.026)DEKR;TAPPALPT(0.002)GY(0.005)DS(0.993)EEEEESRPMSYDEKR	136.53	5.8698999999999995e-21	64779000.0	2752.4	1887.55	3397.02	3166.15	1881.3600000000001	1786.92	1847.32	2405.54	2827.31	3318.3199999999997	True	False	2631.407791630704	2199.4355546357974	2684.0319250250254	2888.5785452649966	2128.7918163447116	2132.2170001198474	2261.6285347424114	2320.935794726947	2695.868975212735	2717.340092821765	0.9683763171867728	0.809407538072218	0.9877423632453192	1.0630169381063421	0.783410152438487	0.784670643822758	0.8322949860846717	0.8541204690785759	0.9920984798090792	1.0	11.407979424208756	-5.877890654499967	17.44797616663152	0.8942153042681237	10.987014044158032	0.03782188650819929	0.09742931465184757	574.4604699875822	82306.4172581309	0.024635039652339437	626.5374044768382	1.3246750163347235e-06	5.877890654499967	10.092798739889908	
TAPPAS(ph)PEAR	ddPTM_K562_Methotrexat_30min_R1	2	TAPPASPEAR	10	0	Q96JM3	Q96JM3	CHAMP1	Chromosome alignment-maintaining phosphoprotein 1	1	T(0.001)APPAS(0.999)PEAR;TAPPAS(1)PEAR	107.03	0.0036738	9288200.0	2745.1000000000004	2060.79	3666.6	3222.3	2605.5	2405.31	2275.74	2839.4	2570.21	3316.2	True	False	2624.4286908899303	2401.300520059284	2897.030767053699	2939.805961943498	2948.168919019301	2870.1021156841234	2786.1326254545493	2739.5366926127604	2450.721498095904	2715.604045364988	0.9664253871507238	0.8842601792989079	1.0668089745993607	1.082560606345089	1.0856402000325698	1.0568927088552669	1.0259715992874365	1.0088130106038915	0.9024590688317807	1.0	11.40705742424771	-6.7640402477610415	24.999996074856462	1.0338327404315766	0.9253427737790203	0.3664586830132742	0.053985804007042316	66.24186620437764	636755.7852269144	0.014888831123199768	0.03347309281034224	1.721709010113036e-07	6.7640402477610415	-0.10848996665255628	
TAPSS(ph)PLTSPSDTR	ddPTM_K562_Methotrexat_30min_R1	1	TAPSSPLTSPSDTR	14	0	A0A087WVA8;Q8IWB9;Q8IWB9-2	A0A087WVA8	TEX2	Testis-expressed sequence 2 protein	1	TAPS(0.305)S(0.424)PLT(0.259)S(0.007)PS(0.004)DTR	169.17	5.435e-05	17462000.0	1281.9	923.23	1555.9	1232.0	936.41	1176.3	812.0	1184.8	864.14	1307.0	True	False	1225.5492109037195	1075.778065273188	1229.3378526315537	1123.9924728033977	1059.5643283280988	1403.6033270884973	994.1116699926589	1143.1299124489672	823.9663200145487	1070.2896349110538	1.145063140787651	1.0051279860919053	1.1486029692642195	1.0501759861449158	0.9899790615239898	1.311423825201431	0.928824906423834	1.0680566037098609	0.7698535920914756	1.0	10.063785546995188	-9.325909023514841	1.9535095103136368	0.9065276907978439	1.0928676870961316	0.2886904107901477	0.11564692014823084	0.436784400099259	3.066842016079364	0.08293142210642743	0.031640795672844904	4.721619399063912e-10	9.325909023514841	0.18633999629828768	
TAPT(ph)LSPEHWK	ddPTM_K562_Methotrexat_30min_R1	1	TAPTLSPEHWK	11	0	Q96JM3	Q96JM3	CHAMP1	Chromosome alignment-maintaining phosphoprotein 1	1	T(0.011)APT(0.6)LS(0.388)PEHWK	118.61	0.006532	33315000.0	2365.9	1850.1	2653.2	2438.9	2135.5	1482.2	1432.6	2388.3	2158.7	2705.2	True	False	2261.8978688486704	2155.7975786769543	2096.3295781232955	2225.0854236365317	2416.355680892618	1768.614172754034	1753.8970177727617	2304.3021352986743	2058.342508176229	2215.2620660760385	1.0210520477404461	0.973156906214525	0.946312226542383	1.0044343997538374	1.0907764448712753	0.7983769504466955	0.7917334227094374	1.040193921336068	0.9291643366702135	1.0	11.11326166473531	-8.254176484812845	24.907367196353643	0.9068958268319229	1.0017277494820434	0.25884704197980024	0.08010554998439208	846.223872760878	2902041.4780277843	0.02825141542503688	0.027684428386249352	5.569593706351788e-09	8.254176484812845	0.09483192265012041	
TAPTALGITLSS(ph)SPTSTPELR	ddPTM_K562_Methotrexat_30min_R1	1	TAPTALGITLSSSPTSTPELR	21	0	F5H1U9;O75970-5;O75970-3;O75970-2;O75970	F5H1U9	MPDZ	Multiple PDZ domain protein	1	TAPTALGITLSS(0.619)S(0.36)PT(0.019)STPELR	276.8	4.436799999999999e-142	12174000.0	937.03	780.84	820.88	744.36	672.75	693.45	795.49	1010.9	914.11	1257.6	True	False	895.8392831680413	909.8605379893597	648.5885059889388	679.1031144934553	761.2284169143094	827.4493982568375	973.8988822197786	975.3460740164257	871.613225621426	1029.8364536068416	0.8698849997303008	0.8835000303229849	0.6297975797199241	0.6594281180424354	0.7391740836598137	0.8034765086813785	0.9456830536624039	0.9470883173735288	0.8463608202727109	1.0	10.008199528571	-8.637931683655914	3.7132223845522576	0.9305902230296418	0.7522703714397492	0.513028588380645	0.08220882871403577	0.21585455451543908	5.666511847018612	0.03672521598927409	0.02756665796552021	2.301803872337719e-09	8.637931683655914	-0.1783198515898926	
TAPTALGITLSSS(ph)PTSTPELR	ddPTM_K562_Methotrexat_30min_R1	2	TAPTALGITLSSSPTSTPELR	21	0	F5H1U9;O75970-5;O75970-3;O75970-2;O75970	F5H1U9	MPDZ	Multiple PDZ domain protein	1	TAPTALGITLS(0.002)S(0.039)S(0.958)PT(0.002)STPELR;TAPTALGITLSS(0.374)S(0.616)PT(0.009)S(0.001)TPELR	197.1	3.8719000000000004e-22	19093200.0	2569.2	2018.41	2812.3	2368.3	1954.0700000000002	1848.23	2092.39	2481.1	3092.6	3337.1000000000004	True	False	2456.261044273219	2351.917945396117	2222.036662353441	2160.6748160229586	2211.064455800439	2205.374289913094	2561.661720660022	2393.8383066991328	2948.8257010171906	2732.718852839847	0.8988341562179613	0.8606512678580158	0.8131230404636379	0.7906685364934563	0.8091079159141075	0.8070256797991731	0.9374040501817222	0.8759914340296848	1.079081259293383	1.0	11.416121325028904	-9.418673827669242	1.414330923311209	1.0315404305220277	0.8308784462521301	0.6870522850172699	0.05014842648513297	0.24321792033820083	0.8543068211601085	0.043717489080939545	0.01525582201733033	3.8135212639596167e-10	9.418673827669242	-0.20066198426989756	
TAPTALGITLSSSPT(ph)STPELR	ddPTM_K562_Methotrexat_30min_R1	1	TAPTALGITLSSSPTSTPELR	21	0	F5H1U9;O75970-5;O75970-3;O75970-2;O75970	F5H1U9	MPDZ	Multiple PDZ domain protein	1	TAPTALGITLSS(0.034)S(0.244)PT(0.457)S(0.252)T(0.012)PELR	316.32	1.4265999999999992e-261	14792000.0	1227.6	1252.7	1377.2	1602.9	957.8	1072.6	908.88	1528.0	1701.4	1697.1	True	False	1173.6361738867354	1459.6873827407287	1088.1445405515617	1462.3762456627962	1083.7674882505025	1279.8647697314643	1112.71947613661	1474.2593739213544	1622.3022853620396	1389.738744764766	0.844501298037417	1.0503322212462334	0.7829849636492263	1.0522670186548806	0.7798354131905176	0.9209391150335242	0.800668097027801	1.0608176389087396	1.1673433524634433	1.0	10.440597982677323	-9.390549258384212	6.143535394928343	1.0927110530615423	0.8958439503500621	0.4166990910809656	0.1006012438578705	0.21178528547971187	9.59571985954867	0.05235440839185199	0.024591309675823327	4.0686538386060087e-10	9.390549258384212	-0.1968671027114801	
TAPTLS(ph)PEHWK	ddPTM_K562_Methotrexat_30min_R1	2	TAPTLSPEHWK	11	0	Q96JM3	Q96JM3	CHAMP1	Chromosome alignment-maintaining phosphoprotein 1	1	TAPT(0.003)LS(0.997)PEHWK;T(0.068)APT(0.226)LS(0.707)PEHWK	165.35	7.2916e-05	124106000.0	4363.9	3260.3999999999996	6077.8	4011.6000000000004	2843.0	2953.5	2890.9	3907.8	4200.3	5282.1	True	False	4172.06818118632	3799.125682675718	4802.152838051322	3659.9092564108028	3216.9043319024627	3524.2220747733395	3539.257914755884	3770.360459037876	4005.0289697932185	4325.4605054045005	0.9645373425496493	0.8783170434521025	1.1102061461551231	0.8461317013154747	0.7437137220148147	0.8147622826216899	0.8182384072941399	0.8716668327746727	0.925919671394314	1.0	12.07863802053202	-7.4133613470426525	24.976448148657287	0.8462171059392186	0.9744896074598868	0.30351558683953106	0.08408080324502148	30.350195205194904	6899.200196349704	0.02344963500911925	0.034781420844307784	3.8604564094372296e-08	7.4133613470426525	0.12827250152066816	
TAQEKDSLITPHVS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TAQEKDSLITPHVSR	15	1	F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;J3KQ37;J3KNE0;Q7Z3J3;A6NKT7;Q99666;O14715;H7BZ48;P49792	F8VYC4;P49792	RGPD1;RGPD2;RGPD8;RGPD3;RGPD4;RGPD5;RGPD6;RANBP2	RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;E3 SUMO-protein ligase RanBP2	1	TAQEKDSLITPHVS(1)R	87.323	0.011734	35846000.0	2698.3	1834.8	3410.1	3114.4	1983.1	2065.2	1935.8	2390.7	2400.2	3243.2	True	False	2579.6859628531943	2137.96951373249	2694.3666117738017	2841.3653874179386	2243.91240963622	2464.2706716850835	2369.952427058853	2306.617725938339	2288.6152258880725	2655.8250527494492	0.9713312856140762	0.8050114263057923	1.0145120850428202	1.0698616554115294	0.844902192376416	0.927873870733293	0.8923601442065449	0.8685126768988068	0.8617341806903953	1.0	11.374944399779292	-7.8422056851056	22.401997893542543	0.8937458290970308	0.9573952068830593	0.15207603162337036	0.07472057046572218	26.63818941782436	7383.903076800408	0.023805029737276596	0.026992401494154928	1.438117313857301e-08	7.8422056851056	0.06364937778602853	
TAQEVETYRR	ddPTM_K562_Methotrexat_30min_R1	1	TAQEVETYRR	10	1	J3KTA4;P17844-2;P17844;J3QR02;J3KRX8;J3KTQ4;J3QRQ7	J3KTA4	DDX5	Probable ATP-dependent RNA helicase DDX5	0		145.91	3.9314e-07	8135800.0	2219.2	1816.9	2543.9	2446.0	2070.6	2128.3	2032.3	2241.0	2270.5	2748.0	False	True	2121.646625195052	2117.111842980466	2009.9701544504194	2231.562977659992	2342.9201933300187	2539.5638536448614	2488.0950085296563	2162.182759789109	2164.9449505786497	2250.310571335559	0.9428239160498877	0.9408087354466634	0.8931967791705757	0.9916688861020458	1.041154151419862	1.1285392718648746	1.1056673866367577	0.960837489425228	0.9620649603462313	1.0	11.135908410017855	-7.505369478496523	3.7887145800382385	1.0388052249547963	0.9276330360781145	0.45110632870400214	0.05264528071894109	0.2230120392411445	6.9948327458964465	0.017600728769082283	0.025264505024312597	3.123420968335906e-08	7.505369478496523	-0.11117218887668179	
TARPGGGTPLLNGAGPGAARQS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	TARPGGGTPLLNGAGPGAARQSPR	24	2	P51798	P51798	CLCN7	H(+)/Cl(-) exchange transporter 7	1	TARPGGGTPLLNGAGPGAARQS(1)PR	74.703	0.00071242	15112000.0	1091.3	896.44	1659.5	1504.4	1073.6	1012.8	1160.8	1180.8	1199.5	1499.7	True	False	1043.3277586857248	1044.561473125329	1311.1936284093217	1372.5115877316807	1214.797217984694	1208.5092660675248	1421.1389489254664	1139.2705947161892	1143.735506813076	1228.089797609876	0.8495533150069828	0.8505578949994274	1.067669181000594	1.117598721529061	0.9891762152482235	0.9840561076393117	1.157194654406628	0.9276769475110469	0.9313126035563755	1.0	10.262200338717072	-6.75266592527328	24.952433259879797	1.024991284048559	0.8500554906055845	0.48672605259362267	0.07050144196903108	155.60495671062174	442543.64101676777	0.018746471265742304	0.04800832103028363	1.7673968422837165e-07	6.75266592527328	-0.1749357934429746	
TAS(ph)ELLLDR	ddPTM_K562_Methotrexat_30min_R1	4	TASELLLDR	9	0	Q92508	Q92508	PIEZO1	Piezo-type mechanosensitive ion channel component 1	1	T(0.015)AS(0.985)ELLLDR;T(0.357)AS(0.643)ELLLDR;T(0.065)AS(0.935)ELLLDR;T(0.044)AS(0.956)ELLLDR	158.08	1.1632999999999999e-10	75258000.0	10662.4	8918.2	12381.8	12272.3	8612.0	8015.900000000001	8231.199999999999	10399.900000000001	10431.099999999999	12031.4	True	False	10193.693662797272	10391.780966519018	9783.029387308543	11196.406512974949	9744.628950525504	9564.859227755409	10077.256130595531	10034.12962228057	9946.160437780632	9852.396873350308	1.0346409907999277	1.054746484546079	0.9929593288888517	1.136414484404302	0.9890617558133185	0.9708154625426572	1.0228227973492872	1.0184455367832197	1.0095168277968933	1.0	13.266259028179244														
TAS(ph)FSESR	ddPTM_K562_Methotrexat_30min_R1	2	TASFSESR	8	0	P53396;P53396-3;P53396-2	P53396	ACLY	ATP-citrate synthase	1	T(0.01)AS(0.955)FS(0.033)ES(0.003)R;T(0.029)AS(0.586)FS(0.038)ES(0.347)R	102.06	0.014824	46425000.0	4316.7	3388.1	4281.5	4087.0	3754.5	3386.1	3012.8	4037.1000000000004	4544.0	4629.0	True	False	4126.943036670635	3947.925937146853	3382.8716601593896	3728.6990554768545	4248.282558609848	4040.415902282037	3688.497092800346	3895.1129047499367	4332.7504318121	3790.6432440728895	1.0887183971014918	1.041492349173163	0.8924268105285038	0.9836586603888688	1.1207286692707183	1.0658918927809142	0.9730530823674158	1.027559876767722	1.1430119251097708	1.0	11.888226968491646	-7.686805814745987	24.999999993598568	1.0528697982519595	0.9966287899586744	0.13215386986656918	0.06650274291135672	85.53515552266249	28648.920588416684	0.02066610932975814	0.026679826429475376	2.0568100479219284e-08	7.686805814745987	-0.056241008293285044	
TAS(ph)FSESRADEVAPAKK	ddPTM_K562_Methotrexat_30min_R1	1	TASFSESRADEVAPAKK	17	2	P53396;P53396-3;P53396-2	P53396	ACLY	ATP-citrate synthase	1	T(0.181)AS(0.627)FS(0.181)ES(0.011)RADEVAPAKK	65.374	0.026757999999999997	71567000.0	3778.5	2559.9	6665.6	4877.3	2617.4	2226.9	2399.4	2884.2	3811.4	5994.2	True	False	3612.401664248154	2982.879964139853	5266.581650813602	4449.71468149676	2961.6339776016553	2657.216908181055	2937.5265283009676	2782.7610512198785	3634.2088459085917	4908.592295014416	0.7359343467815032	0.6076854187237184	1.0729311652472728	0.9065154353960644	0.6033570929510162	0.5413399093829713	0.598445817405648	0.5669163140817964	0.7403770016914633	1.0	12.261093626882914	-7.767912119553099	24.993229445396842	0.6429005058937441	0.8321296967174249	0.1566196737575608	0.16727138978399472	235.98609861853092	911213.0311609049	0.051818706064695005	0.06015720315864258	1.706427653471198e-08	7.767912119553099	0.18922919082368073	
TAS(ph)IS(ph)SSPSEGTPTVGSYGCTPQSLPK	ddPTM_K562_Methotrexat_30min_R1	1	TASISSSPSEGTPTVGSYGCTPQSLPK	27	0	Q6PKG0;Q6PKG0-3	Q6PKG0	LARP1	La-related protein 1	2	T(0.227)AS(0.276)IS(0.351)S(0.347)S(0.333)PS(0.115)EGT(0.218)PT(0.108)VGS(0.021)Y(0.003)GCTPQSLPK	60.979	0.006636100000000001	9281800.0	1279.2	949.33	2142.6	1271.3	858.26	1059.4	799.67	1029.7	1107.5	1339.0	True	False	1222.9678996708308	1106.1906466490427	1692.8975403614404	1159.847102820583	971.136233520439	1264.1140565481214	979.0163536244206	993.4848673604836	1056.0125667323737	1096.4941248247146	1.1153437779398354	1.0088432045414546	1.543918478023826	1.0577777632926175	0.8856739051617669	1.1528689738763558	0.8928605557106163	0.9060558053781655	0.9630809165541017	1.0	10.098682366524066	-7.51272800461974	24.774695356285896	0.9680389512670743	1.2179046551171404	0.3818673594884583	0.14560095010861768	457.06105345847885	1115540.3683961995	0.042043527855678935	0.057867960358484946	3.0709446958950236e-08	7.51272800461974	0.24986570385006612	
TAS(ph)LTSAASVDGNR	ddPTM_K562_Methotrexat_30min_R1	1	TASLTSAASVDGNR	14	0	G3V578;H0YJT9;A0A0A0MS87;Q9UN36-4;Q9UN36-5;Q9UN36-2;Q9UN36-3;Q9UN36-6;Q9UN36	G3V578	NDRG2	Protein NDRG2	1	TAS(0.442)LT(0.442)S(0.114)AAS(0.002)VDGNR	223.58	2.5059e-29	34461000.0	1665.3	1381.2	1641.6	1579.0	1109.4	1188.2	1032.4	1159.0	1579.5	1655.5	True	False	1592.095405973917	1609.4198236141895	1297.0505937913476	1440.5715215556531	1255.3055454845564	1417.8028336704517	1263.9419804192378	1118.2373130725464	1506.0693897551091	1355.672907877009	1.174394941968079	1.1871741437501686	0.9567577741319149	1.0626247033376184	0.9259649124731507	1.045829584284264	0.9323355014880231	0.8248577563032604	1.110938620226336	1.0	10.404793416596755	-6.75898522102291	24.9995554749521	0.9774835263222436	1.1807846256707666	0.5165895972047896	0.07663929588471548	45.45081107747354	462962.2055629228	0.01923567636001966	0.04620314878533126	1.741866147830859e-07	6.75898522102291	0.20330109934852303	
TAS(ph)PPALPK	ddPTM_K562_Methotrexat_30min_R1	2	TASPPALPK	9	0	Q13029-5;Q13029-3;Q13029-2;Q13029	Q13029-5	PRDM2	PR domain zinc finger protein 2	1	T(0.014)AS(0.986)PPALPK;T(0.015)AS(0.985)PPALPK	121.6	0.004239	54314000.0	8652.0	6239.4	11998.9	9047.0	6122.5	5647.1	5396.3	7951.4	7235.5	9930.599999999999	True	False	8271.668439612282	7270.354798333598	9480.494864670447	8253.863556373646	6927.716064745984	6738.322152853399	6606.557641356388	7671.744755103572	6899.123184281794	8132.072110518528	1.017166145011576	0.894034718276744	1.1658153956121202	1.014976680506508	0.8519004714413742	0.8286107232297699	0.8124076559541393	0.9433935964709979	0.8483844081212757	1.0	12.9894072928878	-7.752319424706334	18.414533890418177	0.8719250330463325	1.0239893600084675	0.42505675887722894	0.08063198284958155	7.276377232049189	14688.898397926992	0.023902723033283953	0.03014796418992103	1.7688075172997374e-08	7.752319424706334	0.152064326962135	
TAS(ph)PPPPPK	ddPTM_K562_Methotrexat_30min_R1	3	TASPPPPPK	9	0	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2;M0R088	A9Z1X7;M0R088	SRRM1	Serine/arginine repetitive matrix protein 1	1	T(0.015)AS(0.985)PPPPPK;T(0.086)AS(0.914)PPPPPK;T(0.007)AS(0.993)PPPPPK	96.89	0.0093309	264413000.0	14483.9	10844.9	20367.300000000003	15059.8	11194.1	10725.099999999999	10338.0	12553.0	13075.099999999999	16610.0	True	False	13847.205098532177	12636.835393218591	16092.482065622884	13739.530715847888	12666.32035939127	12797.573785052147	12656.559660571556	12111.503874891872	12467.241454882573	13601.768045809187	1.0180444962666901	0.9290582923234086	1.1831169309331888	1.0101282913790863	0.9312260227297335	0.9408757554129282	0.9305084175781944	0.890435995828022	0.9165897707485042	1.0	13.731506574049494	-7.690662370510002	4.477613170587749	0.9292733576053817	1.0411106148825107	0.3778038524350058	0.06347615658681076	0.219512151476263	8.420970707390463	0.019379973310564878	0.024907775393063963	2.0386263319785642e-08	7.690662370510002	0.11183725727712901	
TAS(ph)PPPPPKR	ddPTM_K562_Methotrexat_30min_R1	2	TASPPPPPKR	10	1	A9Z1X7;Q8IYB3;E9PCT1;Q8IYB3-2;M0R088	A9Z1X7;M0R088	SRRM1	Serine/arginine repetitive matrix protein 1	1	T(0.07)AS(0.93)PPPPPKR;T(0.139)AS(0.861)PPPPPKR	89.88600000000001	0.010154999999999999	51953000.0	8790.8	6272.4	12643.9	9526.4	6747.4	6630.2	5814.3	7280.900000000001	7807.900000000001	10078.599999999999	True	False	8404.366957806707	7308.807487429508	9990.11817911697	8691.23530269017	7634.801367948884	7911.392314258395	7118.304781820587	7024.826620146591	7444.912433218684	8253.2678763692	1.0183077883452851	0.885565281160463	1.2104439512645322	1.0530659410165226	0.925064045214004	0.9585769458556331	0.8624831870781456	0.851156987192929	0.9020563181445977	1.0	13.010749751359628	-7.812398079567549	5.047119158967945	0.9068616702379287	1.0429113906748442	0.3472937462485802	0.08373195993247937	0.2252889767020661	12.250813323496809	0.027123705583617912	0.031620841501935865	1.5402879591469647e-08	7.812398079567549	0.13604972043691543	
TAS(ph)QEGCQELTQEQR	ddPTM_K562_Methotrexat_30min_R1	1	TASQEGCQELTQEQR	15	0	A0A0C4DG33;O43933-2;O43933	A0A0C4DG33	PEX1	Peroxisome biogenesis factor 1	1	T(0.224)AS(0.776)QEGCQELTQEQR	134.33	8.4483e-05	13528000.0	413.62	425.16	522.4	496.18	306.88	576.43	388.25	462.37	672.07	702.16	True	False	395.4377600546039	495.4104635156451	412.7553790183966	452.6806697691472	347.2400989708856	687.8169394147943	475.32494565843575	446.1081850261892	640.8256123917166	574.9920199304867	0.6877273881164649	0.8615953723593198	0.7178454043036917	0.7872816562286791	0.6039042055103042	1.1962199744927722	0.8266635521583411	0.7758510893422854	1.1144947932828508	1.0	9.167398123420254	-8.244178706013134	24.9943826053774	0.9588877043937897	0.7412102599231899	0.4725751342050216	0.13118327488076154	853.1690349182758	1235435.756374872	0.04289638362340949	0.042799840042159955	5.699297060416183e-09	8.244178706013134	-0.21767744447059978	
TAS(ph)STLLNILFRFGQ	ddPTM_K562_Methotrexat_30min_R1	1	TASSTLLNILFRFGQ	15	1	C9J4I2	C9J4I2	GAL3ST1		1	T(0.101)AS(0.742)S(0.137)T(0.02)LLNILFRFGQ	95.428	0.0047433	9623700.0	162.65	232.72	238.47	259.02	298.9	106.59	174.3	160.06	190.05	181.99	True	False	155.500100751611	271.17302443635543	188.4184058853696	236.31211875449338	338.21058909801144	127.18700895550701	213.39121192083795	154.43059907712842	181.21461698193008	149.02984748084373	1.0434158215964018	1.8195886865630186	1.264299796787948	1.5856697349493625	2.2694151192866583	0.8534331283661524	1.4318689546284828	1.0362393955813376	1.2159619032370235	1.0	7.2194574902623625														
TAS(ph)TPTPPQTGGGLEPQANGETPQVAVIVRPDDR	ddPTM_K562_Methotrexat_30min_R1	1	TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR	34	1	Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;C9JSU8;C9J556;C9JF13;C9K073;C9J2Z7;C9J6B6;C9JWW9;C9JWH7	Q04637-9	EIF4G1	Eukaryotic translation initiation factor 4 gamma 1	1	T(0.053)AS(0.3)T(0.287)PT(0.273)PPQT(0.083)GGGLEPQANGET(0.003)PQVAVIVRPDDR	42.06399999999999	0.020705	41359000.0	525.78	392.81	638.98	585.85	386.57	454.93	418.37	490.69	600.72	664.89	True	False	502.66734075119587	457.71517587162566	504.86683017835986	534.4894400908036	437.4107307715565	542.8387839771912	512.2001223827938	473.4321545742603	572.7926583182581	544.4719780841707	0.9232198551703754	0.8406588296466321	0.9272595294156935	0.9816656533390522	0.8033668368217409	0.9970004074172444	0.9407281604924249	0.8695252898783191	1.0520149454407903	1.0	9.088713990563923	-9.766268404801503	24.999913840809246	1.026007516388324	0.911365101532341	0.3908735471908862	0.05770380930011012	128.5428251861826	665429.1442517489	0.048450360287179854	0.01409183260166662	1.712898366483376e-10	9.766268404801503	-0.11464241485598303	
TASDTDSSYCIPT(ph)AGMSPSR	ddPTM_K562_Methotrexat_30min_R1	1	TASDTDSSYCIPTAGMSPSR	20	0	B7Z3B9;Q13480;Q13480-2	B7Z3B9	GAB1	GRB2-associated-binding protein 1	1	TASDTDSSYCIPT(0.824)AGMS(0.111)PS(0.065)R	93.76799999999999	0.014359	22168000.0	1707.7	1245.2	1766.6	1542.2	1357.3	1246.3	1649.7	1744.9	1751.7	1709.9	True	False	1632.6315527422435	1450.9481352189314	1395.8148020174183	1406.997720419967	1535.808740658183	1487.1298363941132	2019.6872191956752	1683.5308779812644	1670.2638493409465	1400.2205407302304	1.16598171877325	1.0362282890538415	0.9968535394356417	1.004840080182085	1.0968334601471008	1.0620682907697945	1.4424065070080934	1.202332653328514	1.192857696881011	1.0	10.451438360374969	-8.57775003597322	24.999997862478843	1.2299717601268936	1.0549504041650695	0.29908828538349275	0.1097614947627645	95.63761315384876	43572.675365929936	0.04048917224239575	0.031362781705904515	2.6439300689647612e-09	8.57775003597322	-0.1750213559618241	
TASDTDSSYCIPTAGMS(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	1	TASDTDSSYCIPTAGMSPSR	20	0	B7Z3B9;Q13480;Q13480-2	B7Z3B9	GAB1	GRB2-associated-binding protein 1	1	TASDTDSSYCIPT(0.101)AGMS(0.881)PS(0.018)R	103.14	0.00019737	25156000.0	2050.4	1661.3	2388.3	1960.7	1754.8	1643.9	1625.1	1729.3	2100.8	2512.5	True	False	1960.266871079637	1935.8015877282444	1887.028468050607	1788.8084751831332	1985.5869580100048	1961.5604092500057	1989.5700429865387	1668.47953882343	2003.1342665384827	2057.461903377218	0.9527597414377198	0.9408687395624316	0.9171632606918003	0.869424834669792	0.9650662083952883	0.9533884472077977	0.9670021300130817	0.8109406721381848	0.9735948273211965	1.0	11.006650002153409	-6.5539705233360595	5.002950157257802	0.9263143468162301	0.9503644838156874	0.005096467524199899	0.05309914452475088	0.7999438036548959	50.27079494190765	0.013309060921359596	0.0405029097183046	2.7927333846768704e-07	6.5539705233360595	0.02405013699945724	
TASDTDSSYCIPTAGMSPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TASDTDSSYCIPTAGMSPSR	20	0	B7Z3B9;Q13480;Q13480-2	B7Z3B9	GAB1	GRB2-associated-binding protein 1	1	TASDTDSSY(0.006)CIPT(0.213)AGMS(0.243)PS(0.538)R	100.27	0.00023661	21198000.0	1679.3	1870.6	2310.0	1579.3	1904.6	1646.1	1689.3	1964.5	1785.6	1889.1	True	False	1605.4799827370448	2179.684855236535	1825.1625680177954	1440.8452210214334	2155.088283693784	1964.185528113895	2068.1685272396535	1895.4074215107998	1702.587845740249	1546.9656842467277	1.0378252078156536	1.4090065975173203	1.1798339075029525	0.9314008938233377	1.3931067157079005	1.2697020678065825	1.3369194600116276	1.2252420598675016	1.1005983281195402	1.0	10.59522547904686	-9.942376279826766	3.0464427306561492	1.0019905595166276	1.2291644539145974	0.2067673406461974	0.14155115481370337	0.35362348019483614	7.041586865714913	0.13573051073717982	0.036437483987047124	1.1418885551913597e-10	9.942376279826766	0.22717389439796976	
TASLTSAASVDGNRS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TASLTSAASVDGNRSR	16	1	G3V578;H0YJT9;A0A0A0MS87;Q9UN36-4;Q9UN36-5;Q9UN36-2;Q9UN36-3;Q9UN36-6;Q9UN36	G3V578	NDRG2	Protein NDRG2	1	TASLTSAASVDGNRS(1)R	142.57	1.7577000000000001e-06	11212000.0	1362.5	1187.7	1661.4	1467.6	1358.4	1175.4	1069.7	1362.5	1239.5	1609.7	True	False	1302.6061314114345	1383.9472375518185	1312.6948443743574	1338.9377865959943	1537.0534099389054	1402.529414825996	1309.607454915206	1314.5801027276477	1181.875915543817	1318.167731688082	0.9881945219090449	1.0499022273739758	0.9958481100832928	1.0157567617599874	1.1660529786831546	1.0639992021575873	0.9935059275332787	0.9972783213591188	0.8966051035328212	1.0	10.364318243989901	-9.139150471436508	2.2167148087571116	0.9551735858995178	1.047304514754226	0.32267082942731995	0.05365998961490788	0.395088899306521	3.732005484879921	0.03510379668006769	0.016624756631405942	7.258544246948476e-10	9.139150471436508	0.09213092885470808	
TASS(ph)TLLNILFRFGQ	ddPTM_K562_Methotrexat_30min_R1	1	TASSTLLNILFRFGQ	15	1	C9J4I2	C9J4I2	GAL3ST1		1	T(0.019)AS(0.144)S(0.742)T(0.095)LLNILFRFGQ	117.27	0.00079892	11995000.0	276.13	315.46	289.72	400.55	196.32	187.59	181.39	355.95	331.52	306.78	True	False	263.9916558287263	367.5844030968232	228.91173125805892	365.43440339399405	222.1395210830431	223.8391125805757	222.0713249014389	343.43103674561945	316.10770756037596	251.21916924102	1.0508420063098465	1.4632020486627844	0.9112032809822752	1.4546437857351395	0.8842459027078549	0.8910112761571317	0.8839744418085523	1.3670574494103642	1.2582945342721907	1.0	7.97280274283313	-7.778103644129442	24.999529020015885	1.0497897616255663	1.2152914561830117	0.13299813099954794	0.21563505536480715	555.7925057454745	833789.4767712117	0.06870950679878543	0.07811813272378014	1.6668493724324504e-08	7.778103644129442	0.16550169455744546	
TAST(ph)PT(ph)PPQTGGGLEPQANGETPQVAVIVRPDDR	ddPTM_K562_Methotrexat_30min_R1	1	TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR	34	1	Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;C9JSU8;C9J556;C9JF13;C9K073;C9J2Z7;C9J6B6;C9JWW9;C9JWH7	Q04637-9	EIF4G1	Eukaryotic translation initiation factor 4 gamma 1	2	T(0.075)AS(0.226)T(0.669)PT(0.689)PPQT(0.15)GGGLEPQANGET(0.191)PQVAVIVRPDDR	44.06100000000001	0.021366999999999997	9104600.0	366.53	464.49	923.37	558.4	370.56	498.94	367.69	592.3	561.0	533.73	True	False	350.41778007063004	541.2390775199495	729.567255597659	509.44593897192925	419.2951351494116	595.3530936134788	450.15384229014853	571.4684732811642	534.9192324486335	437.06632505055603	0.8017496658661515	1.2383454100641218	1.669236941357285	1.1656032729426158	0.9593398326922377	1.3621573191314007	1.0299440073267567	1.307509731423627	1.2238857166283827	1.0	8.771708415864198	-7.47824066953261	24.998651104430756	1.1578658609884398	1.2667650064654652	0.023329193387314873	0.2298294416939036	1714.042095230595	959914.049550244	0.06591529454347769	0.09776237563918026	3.3247525705435255e-08	7.47824066953261	0.1088991454770254	
TASTPTPPQT(ph)GGGLEPQANGETPQVAVIVRPDDR	ddPTM_K562_Methotrexat_30min_R1	3	TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR	34	1	Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6;C9JSU8;C9J556;C9JF13;C9K073;C9J2Z7;C9J6B6;C9JWW9;C9JWH7	Q04637-9	EIF4G1	Eukaryotic translation initiation factor 4 gamma 1	1	T(0.008)AS(0.045)T(0.117)PT(0.218)PPQT(0.588)GGGLEPQANGET(0.024)PQVAVIVRPDDR;T(0.001)AS(0.004)T(0.012)PT(0.295)PPQT(0.668)GGGLEPQANGET(0.021)PQVAVIVRPDDR;T(0.006)AS(0.021)T(0.059)PT(0.139)PPQT(0.465)GGGLEPQANGET(0.311)PQVAVIVRPDDR	64.583	0.00042214	541734000.0	2698.3500000000004	2515.76	3114.2599999999998	2881.4799999999996	2578.72	2219.06	2061.99	2586.78	2504.76	3039.33	True	False	2579.733764913062	2931.446579391566	2460.619384880996	2628.865122186308	2917.866879621357	2647.8619391388256	2524.4437468080814	2495.801481199137	2388.314254310231	2488.87788529014	1.0365047558821192	1.1778185650317006	0.9886460880318162	1.0562451206318821	1.1723624115376026	1.0638778040450756	1.0142899182511702	1.0027818142263696	0.9595947910605561	1.0	11.281279732093054	-8.810997805420074	2.8087314655336875	0.9889424136609394	1.0868068840350216	0.3940850466395234	0.054814504494670444	0.28375848106443124	4.5552758743493715	0.025533405967260905	0.01673366760544775	1.5452622480487285e-09	8.810997805420074	0.09786447037408219	
TATCHSSS(ph)SPPIDAASAEPYGFR	ddPTM_K562_Methotrexat_30min_R1	3	TATCHSSSSPPIDAASAEPYGFR	23	0	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	TATCHS(0.001)S(0.02)S(0.968)S(0.011)PPIDAASAEPYGFR;T(0.074)AT(0.074)CHS(0.074)S(0.074)S(0.472)S(0.232)PPIDAASAEPYGFR;TATCHSS(0.001)S(0.705)S(0.294)PPIDAASAEPYGFR	127.1	3.9087e-08	274705000.0	1824.1599999999999	1552.22	2053.02	2145.75	1663.9499999999998	1323.42	1582.06	1841.28	2015.11	2293.91	True	False	1743.9721105875096	1808.6979717712254	1622.1191581783087	1957.6354289917947	1882.7885905976439	1579.152184931956	1936.8772273751063	1776.5211387525603	1921.4279759350536	1878.4606705576243	0.9284049104258374	0.9628617730039087	0.8635363963711733	1.0421487442751023	1.002303971601777	0.8406628947217628	1.031098099488099	0.9457324109028042	1.0228736784596477	1.0	10.875335195166413	-7.42014894955167	0.18234895961090766	1.0162389530719642	0.8861868049039084	0.10803100320319226	0.06246580802998304	27.081850806992353	1.4598550962147696	0.21794603691554498	0.8789112464048179	3.8005902549477815e-08	7.42014894955167	-0.13005214816805577	
TATCHSSSS(ph)PPIDAASAEPYGFR	ddPTM_K562_Methotrexat_30min_R1	3	TATCHSSSSPPIDAASAEPYGFR	23	0	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	T(0.001)AT(0.001)CHS(0.001)S(0.014)S(0.212)S(0.77)PPIDAASAEPYGFR;TATCHSS(0.05)S(0.242)S(0.708)PPIDAASAEPYGFR;T(0.018)AT(0.064)CHS(0.064)S(0.048)S(0.056)S(0.75)PPIDAASAEPYGFR	94.73	5.2488e-05	1500966000.0	1835.01	1784.56	1959.12	2099.2	1567.39	1511.29	1682.07	2230.71	2101.4	2392.9700000000003	True	False	1754.3451575789345	2079.4282076664763	1547.927484958884	1915.166395218257	1773.529258100809	1803.325403549753	2059.317015695261	2152.254664921535	2003.7063726694425	1959.5799446465987	0.8952659279717841	1.0611601804495359	0.7899282135376444	0.977335168412151	0.9050558324736565	0.9202612062224256	1.05089716871268	1.0983245010244704	1.0225183096731487	1.0	10.936328716184754	-8.763219996410335	24.87685675996735	1.0511287310317305	0.9263863077038185	0.41649123047959613	0.06819221211067839	41.29187113714524	576866.2416829163	0.026297370595091137	0.01876962940220426	1.7249638721531008e-09	8.763219996410335	-0.12474242332791208	
TATDS(ph)DERIDDEIDTEVEETQEEK	ddPTM_K562_Methotrexat_30min_R1	1	TATDSDERIDDEIDTEVEETQEEK	24	1	A0A0C4DGZ1;Q8N5P1	A0A0C4DGZ1	ZC3H8	Zinc finger CCCH domain-containing protein 8	1	T(0.091)AT(0.091)DS(0.817)DERIDDEIDT(0.001)EVEETQEEK	70.572	0.0015307	7896000.0	973.97	578.94	1615.4	1176.0	789.8	959.16	607.82	946.78	841.47	1382.8	True	False	931.1554449987493	674.5999947025769	1276.3496157471632	1072.9019058577876	893.6725435584119	1144.5040952224795	744.1391074568204	913.4812107599876	802.3502433664016	1132.3615203940362	0.822312864070768	0.5957461310305133	1.1271573545726123	0.9474906083742954	0.7892113317727664	1.0107232315914603	0.6571568302655469	0.8067045676738616	0.708563677691204	1.0	10.145118914574791	-8.765513053127318	24.999923460810994	0.7769983551782186	0.8789786291068075	0.06819082352206829	0.1564578478120339	285.2115660810941	1750299.3957218642	0.06403205969463008	0.0449398629901963	1.7158801369617276e-09	8.765513053127318	0.10198027392858888	
TATNDEESPLSVS(ph)SPEGTGTWLHYTSGVGTGR	ddPTM_K562_Methotrexat_30min_R1	1	TATNDEESPLSVSSPEGTGTWLHYTSGVGTGR	32	0	A0A087WZV0;O43314-2;O43314;A0A087WWN8	A0A087WZV0	PPIP5K2	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2	1	TATNDEESPLS(0.003)VS(0.497)S(0.497)PEGT(0.003)GTWLHYTSGVGTGR	124.02	3.2274000000000004e-21	14359000.0	399.16	436.87	449.1	270.03	478.97	346.37	264.11	532.11	473.56	488.39	True	False	381.613404340689	509.05534197967745	354.8400473146286	246.3568891486212	541.9629503522067	413.301100402655	323.343390593302	513.3953896971807	451.5442989632349	399.93783840413914	0.9541817945094426	1.2728361587664394	0.8872379986113266	0.6159879498565384	1.3551179666189785	1.0334133475638085	0.8084841181407845	1.2836879644740995	1.1290362041386721	1.0	8.643631971786883	-9.27562508092134	24.923687512315976	1.1547715320412206	0.9979373530131723	0.09174253347877392	0.2101401146127	1989.7850183240305	3495947.455628223	0.11580147900211993	0.05605098378621294	5.301208908063931e-10	9.27562508092134	-0.1568341790280483	
TATTLPDDMITQREDAEGVAAEEEQEGDS(ph)GEQETGATDARPR	ddPTM_K562_Methotrexat_30min_R1	1	TATTLPDDMITQREDAEGVAAEEEQEGDSGEQETGATDARPR	42	2	Q96KC8	Q96KC8	DNAJC1	DnaJ homolog subfamily C member 1	1	TATTLPDDMIT(0.059)QREDAEGVAAEEEQEGDS(0.94)GEQET(0.001)GATDARPR	65.668	5.9295000000000006e-06	38884000.0	488.34	531.53	619.48	720.75	506.66	506.11	510.12	436.87	502.34	405.96	True	False	466.8731583218055	619.3562980347883	489.4596136950925	657.5629665365651	573.2946707005634	603.9085946380679	624.5273954392305	421.5050344797266	478.9863230450026	332.43671016717025	1.4043971199421148	1.8630803370763016	1.4723392415024237	1.9780094869964895	1.724522753255122	1.8166122337523567	1.8786354705687545	1.267925657992967	1.440834626248521	1.0	8.376935893940175	-9.739515433184627	1.3247576090009687	1.0500481341353187	1.7377536207967528	0.5597225786747226	0.19905701117009308	0.2834836210685516	0.9959611787748285	0.17774286646407997	0.0563452667488945	1.8217323344590102e-10	9.739515433184627	0.687705486661434	
TATYNGPPAS(ph)PSLSHEATPLSQTR	ddPTM_K562_Methotrexat_30min_R1	3	TATYNGPPASPSLSHEATPLSQTR	24	0	J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;P27448-6;P27448-7;H0YIY6;A2SY06	J3KNR0;P27448-6	MARK3	MAP/microtubule affinity-regulating kinase 3	1	TAT(0.001)YNGPPAS(0.97)PS(0.029)LSHEATPLSQTR;TATYNGPPAS(0.993)PS(0.007)LSHEATPLSQTR;TATYNGPPAS(0.966)PS(0.032)LS(0.001)HEATPLSQTR	142.78	3.462e-17	154767000.0	3408.2799999999997	2702.8100000000004	3864.0699999999997	3486.45	3185.54	2946.83	2977.12	3750.12	4056.88	4045.6400000000003	True	False	3258.4560921592424	3149.4034125851927	3053.0545126409206	3180.798341562828	3604.4943459193028	3516.263191672361	3644.814944542543	3618.2261540117493	3868.2765342891457	3312.93539294687	0.9835555800745127	0.9506383430507485	0.9215557052940945	0.9601148118779023	1.088006229639477	1.0613739100250397	1.1001768861240802	1.0921511363351164	1.1676281229403322	1.0	11.693894353706128	-7.750230749586776	5.6125662039801	1.0895865065003576	0.9503141981068499	0.707227416632155	0.04121277171699354	0.08661143514437403	8.65604740157324	0.012226207193981287	0.015100057446076922	1.777334824590268e-08	7.750230749586776	-0.13927230839350768	
TAVAPSAVNLADPRT(ph)PTAPAVNLAGAR	ddPTM_K562_Methotrexat_30min_R1	1	TAVAPSAVNLADPRTPTAPAVNLAGAR	27	1	Q9UQ35	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	TAVAPSAVNLADPRT(0.632)PT(0.368)APAVNLAGAR	81.38	0.0025103	101010000.0	1986.0	1662.2	2827.3	1936.8	1629.0	1534.3	1348.3	2183.9	2177.8	2281.9	True	False	1898.6978179692549	1936.8502974308622	2233.8883673405676	1767.0037510759896	1843.2420529965223	1830.7817603943563	1650.690596860962	2107.0909991536964	2076.5545533451573	1868.6257979369036	1.0160931204447423	1.0365105199603277	1.1954712226529998	0.9456166949139244	0.9864158222751678	0.9797476639869096	0.883371405170282	1.1276152782863618	1.1112736191686008	1.0	10.867761975461612	-3.141370765615493	14.854027340206798	1.0278081843241778	0.005170397355068745	0.0	0.08812812438611191	0.0	0.0	0.02101096853308705	0.0	0.0007221530243297833	3.141370765615493	-1.022637786969109	
TAVIPINGS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	5	TAVIPINGSPR	11	0	A0A3B3IS71;P06400	A0A3B3IS71	RB1	Retinoblastoma-associated protein	1	TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR	144.51	2.0311e-07	974094000.0	23967.699999999997	21139.600000000002	28767.299999999996	24444.2	21011.399999999998	20260.899999999998	19683.2	22566.300000000003	21819.800000000003	25198.300000000003	True	False	22914.10860611366	24632.559588238128	22729.436858414865	22301.21493806882	23774.76738632973	24176.032177001893	24097.658648767865	21772.630438299413	20805.402260575214	20634.643693480644	1.1104678591253405	1.1937477551900058	1.101518262008859	1.0807656904255012	1.152177267487356	1.171623437560985	1.1678252848330661	1.055149328562349	1.0082753339302155	1.0	14.332780906526015	-9.46607871364665	3.493938851142693	1.0078097043129135	1.139521339266834	0.7395068570671381	0.033067094202234845	0.1309954565683645	3.1377244640097492	0.02404556238387111	0.00949638419960605	3.4191746611093755e-10	9.46607871364665	0.13171163495392046	
TAVIPINGSPRT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	TAVIPINGSPRTPR	14	1	A0A3B3IS71;P06400	A0A3B3IS71	RB1	Retinoblastoma-associated protein	1	TAVIPINGS(0.229)PRT(0.771)PR;TAVIPINGS(0.256)PRT(0.744)PR	107.62	0.01128	23585000.0	5655.6	5417.0	7589.299999999999	6026.7	5836.4	6166.6	5715.299999999999	6158.299999999999	6356.6	7632.8	True	False	5406.986595824228	6312.067176743461	5996.409643920977	5498.348568055383	6603.9889000054645	7358.208175485786	6997.101511710644	5941.7090984423285	6061.083053445598	6250.4259566557685	0.8650588989165765	1.0098619230937458	0.9593601596921083	0.8796758182857065	1.0565662157749751	1.1772330760354652	1.1194599472472397	0.9506086688564477	0.9697072000335356	1.0	12.609738795175206	-7.778914005712138	24.66226237613752	1.053401390375842	0.9365066125274442	0.3726176155479971	0.0737350766123988	245.83021466009487	346942.92013724614	0.025025286452506058	0.028443588466013206	1.6637420539320284e-08	7.778914005712138	-0.11689477784839775	
TAVPPLSEGDGYS(ph)SENTSR	ddPTM_K562_Methotrexat_30min_R1	1	TAVPPLSEGDGYSSENTSR	19	0	Q9BYW2;H7C3H4;A0A1W2PPX9	Q9BYW2	SETD2	Histone-lysine N-methyltransferase SETD2	1	TAVPPLSEGDGYS(0.857)S(0.13)ENT(0.003)S(0.009)R	139.12	4.6634e-17	0.0	2453.9	2018.3	3182.0	2423.0	2382.5	2326.3	1890.2	2397.3	2596.2	2535.0	True	False	2346.0294942168953	2351.7897697657954	2514.141684602867	2210.579351950187	2695.8405102911083	2775.8245513950264	2314.125466280939	2312.9856001974263	2475.5032286687024	2075.8869353477603	1.1301335608742484	1.1329084112048784	1.211116868550304	1.0648842739500466	1.298645154698414	1.337175211293485	1.1147646949727865	1.1142155966263867	1.192503881842677	1.0	11.019512153090458	-12.682345733761586	6.37614568292906	0.9983181758918479	1.1783162698039273	0.29891858954829287	0.0814802645771946	0.0020703430812902615	0.00010314263361917684	0.0838468452400593	0.0201580992195538	2.0780417380663389e-13	12.682345733761586	0.17999809391207944	
TAVPS(ph)PVEAAAASDPAAAR	ddPTM_K562_Methotrexat_30min_R1	3	TAVPSPVEAAAASDPAAAR	19	0	Q147X3;J3KNC2;Q147X3-2	Q147X3	NAA30	N-alpha-acetyltransferase 30	1	T(0.001)AVPS(0.999)PVEAAAASDPAAAR;TAVPS(1)PVEAAAASDPAAAR;T(0.023)AVPS(0.902)PVEAAAAS(0.076)DPAAAR	194.94	6.5004e-16	27783000.0	5772.1	4955.5	6089.6	6000.5	5296.9	4666.0	4488.52	5235.7	5475.1	6290.4	True	False	5518.3653953173925	5774.312145902198	4811.476179307867	5474.445481377262	5993.535193687707	5567.638463142842	5495.184868220995	5051.557463376991	5220.5637960419135	5151.147604777731	1.0712885397030874	1.1209758657559097	0.934059077407369	1.0627623010258276	1.1635339643788607	1.0808539941621575	1.06678846925764	0.9806664166819119	1.0134758691829755	1.0	12.330678165361967	-9.246433922204922	17.77557079704165	0.99780353717709	1.0716530520941783	0.2704202815904867	0.05526171547642904	25.35864011035326	30041.89940026125	0.027922262042272012	0.01590853536221956	5.669778304937377e-10	9.246433922204922	0.07384951491708824	
TCEERPAEDGS(ph)DEEDPDSMEAPTR	ddPTM_K562_Methotrexat_30min_R1	2	TCEERPAEDGSDEEDPDSMEAPTR	24	1	D6RGJ8;Q9H6Y2	D6RGJ8	WDR55	WD repeat-containing protein 55	1	T(0.018)CEERPAEDGS(0.92)DEEDPDS(0.031)MEAPT(0.031)R;TCEERPAEDGS(0.576)DEEDPDS(0.383)MEAPT(0.041)R	68.676	0.0030688000000000004	25164000.0	2414.2599999999998	1916.99	3420.9	2900.7200000000003	2075.8	2564.2	1937.8	2916.8	2453.59	2898.7	True	False	2308.1320211533007	2233.7400142413576	2702.8998393645356	2646.418381258337	2348.804084475248	3059.6953594493957	2372.4009779701646	2814.2144907420225	2339.52313644143	2373.7173410227015	0.9723702065380945	0.9410303306285678	1.138678052627786	1.1148835354247124	0.9895045395182901	1.2889889232266993	0.9994454423743774	1.185572705775295	0.9855946603286223	1.0	11.212932435739875	-6.754598016946805	24.996204531758664	1.0959428136567892	0.956700209713422	0.23068799729104328	0.09486783784134836	199.0234968603039	727151.0334612975	0.022458540304012998	0.056678399666194805	1.7595515016529634e-07	6.754598016946805	-0.1392426039433673	
TCFS(ph)PNRVIGLSSDLQQVGGASAR	ddPTM_K562_Methotrexat_30min_R1	1	TCFSPNRVIGLSSDLQQVGGASAR	24	1	O00303	O00303	EIF3F	Eukaryotic translation initiation factor 3 subunit F	1	T(0.254)CFS(0.744)PNRVIGLS(0.001)SDLQQVGGASAR	63.883	0.003992900000000001	233640000.0	790.55	600.74	875.66	819.89	818.36	501.64	598.89	730.9	784.85	1081.1	True	False	755.798368577842	700.0020741659341	691.8709326019323	748.0115166613455	925.9886841560669	598.5748304009811	733.206327637812	705.193832721936	748.3624948080385	885.30231392681	0.8537178280100209	0.7906926968947298	0.7815081037494395	0.8449221298693965	1.0459576006853413	0.6761247779258224	0.8281988153692185	0.796557087481233	0.8453185799194775	1.0	9.79002638206256	-10.046654738116164	19.831585973015983	1.0000000019103903	0.8269473893423714	0.258679003084643	0.08721063489657198	974.859993196696	414386.59469955385	0.08408355316200682	0.02171026803351042	8.981425294560066e-11	10.046654738116164	-0.17305261256801885	
TCNS(ph)PQNST(ph)DSVSDIVPDSPFPGALGSDTR	ddPTM_K562_Methotrexat_30min_R1	1	TCNSPQNSTDSVSDIVPDSPFPGALGSDTR	30	0	Q14694;Q14694-3;Q14694-2	Q14694	USP10	Ubiquitin carboxyl-terminal hydrolase 10	2	T(0.153)CNS(0.836)PQNS(0.464)T(0.51)DS(0.031)VS(0.006)DIVPDSPFPGALGSDTR	102.78	5.051899999999999e-09	8150900.0	1235.1	1192.8	1917.4	1602.3	1100.8	1140.7	1210.9	1277.4	1178.8	1410.1	True	False	1180.8064828669822	1389.8899258666406	1514.9639428213518	1461.8288467312368	1245.5744947443661	1361.124130927356	1482.4751492538303	1232.473117962787	1123.9978452949172	1154.717225851627	1.022593632823061	1.2036625892036632	1.3119782998855287	1.2659626218471876	1.0786835658623954	1.1787510400422923	1.2838425859287543	1.067337604714274	0.9733966205154221	1.0	10.173323883654982	-9.47974078013949	4.9344569420501765	0.9942820312453842	1.1949354576716458	0.5004742784240837	0.08417697797499439	0.16728141637050126	9.61740313416424	0.05371868953506671	0.023201002037047076	3.313288246274401e-10	9.47974078013949	0.2006534264262616	
TCNS(ph)PQNSTDSVSDIVPDSPFPGALGSDTR	ddPTM_K562_Methotrexat_30min_R1	3	TCNSPQNSTDSVSDIVPDSPFPGALGSDTR	30	0	Q14694;Q14694-3;Q14694-2	Q14694	USP10	Ubiquitin carboxyl-terminal hydrolase 10	1	T(0.078)CNS(0.899)PQNS(0.022)TDSVSDIVPDSPFPGALGSDTR;T(0.087)CNS(0.908)PQNS(0.005)TDSVSDIVPDSPFPGALGSDTR;T(0.11)CNS(0.882)PQNS(0.008)TDSVSDIVPDSPFPGALGSDTR	167.05	3.699e-36	149056000.0	3857.52	3231.79	4182.68	4161.29	3130.38	3186.9999999999995	3152.88	4134.9400000000005	3391.1600000000003	3897.6	True	False	3687.948039664027	3765.7883664625683	3304.7926277041893	3796.4761665195197	3542.07983907873	3802.8426450999236	3859.9935986286364	3989.511816493698	3233.5057117834353	3191.7068714838	1.1554783030402564	1.179866609965934	1.035431122209483	1.189481465368581	1.1097760482722663	1.1914761593792638	1.2093822377974688	1.249961847103774	1.0130960774227376	1.0	11.640112444218726	-9.828486521849488	9.508454509705707	1.004607286692025	1.1625348085259066	0.566305672804724	0.05547092051345976	0.2996624409199102	39.37112407023886	0.055072915084848295	0.014253291623356788	1.4842719431186983e-10	9.828486521849488	0.1579275218338816	
TCNSPQNS(ph)TDSVSDIVPDSPFPGALGSDTR	ddPTM_K562_Methotrexat_30min_R1	1	TCNSPQNSTDSVSDIVPDSPFPGALGSDTR	30	0	Q14694;Q14694-3;Q14694-2	Q14694	USP10	Ubiquitin carboxyl-terminal hydrolase 10	1	T(0.004)CNS(0.01)PQNS(0.404)T(0.404)DS(0.16)VS(0.018)DIVPDSPFPGALGSDTR	91.064	4.201e-06	44336000.0	1163.6	847.39	1425.7	1197.6	974.34	1094.8	1280.4	1296.9	1092.0	1449.6	True	False	1112.4495372552994	987.4067943327735	1126.465053343277	1092.6082673939518	1102.4827881624508	1306.3546055398165	1567.5622934219223	1251.2872919100819	1041.2331583492112	1187.063393088802	0.9371441691590258	0.8318062877530816	0.9489510500464133	0.9204295859473242	0.9287480302915685	1.100492705903947	1.320537978467217	1.0541031752770724	0.8771504238201357	1.0	10.213181266358628	-8.230115984912622	5.764215188048671	1.089675473102719	0.9101324456598693	0.3394171097777169	0.10796796440387038	0.21523791518567162	22.21275017132503	0.038534813528629586	0.037655137614491234	5.886864167451508e-09	8.230115984912622	-0.17954302744284967	
TDAEAT(ph)DTEATET	ddPTM_K562_Methotrexat_30min_R1	1	TDAEATDTEATET	13	0	Q9Y3D3	Q9Y3D3	MRPS16	28S ribosomal protein S16, mitochondrial	1	TDAEAT(0.984)DT(0.016)EATET	169.65	0.00084573	7342100.0	1729.9	1754.1	2808.1	1979.6	1752.4	2031.9	1813.6	2172.9	2203.2	2662.7	True	False	1653.8556673237747	2043.9352103979497	2218.718184957044	1806.0515415272778	1982.871315942974	2424.5359179725565	2220.3459663776907	2096.477875388556	2100.7737128891777	2180.4592279094604	0.7584896090487449	0.9373874935316242	1.0175462840845066	0.8282895265410901	0.9093824321787819	1.1119382040897445	1.0182928155489852	0.9614845572685061	0.963454709906829	1.0	11.090416298588703	-8.035679416276894	23.4685588557095	1.0092561102733242	0.8948590294003904	0.3995081002661539	0.07414835790817467	331.20999482226296	217856.30928624404	0.0251996144860605	0.025213353424300426	9.2112927204863e-09	8.035679416276894	-0.11439708087293377	
TDASSASS(ph)FLDSDELER	ddPTM_K562_Methotrexat_30min_R1	2	TDASSASSFLDSDELER	17	0	G3XAC6;Q14498-2;Q14498;H0Y4X3;Q14498-3;A0A0U1RQW2;A0A0U1RQH7	G3XAC6	RBM39	RNA-binding protein 39	1	TDASSAS(0.048)S(0.952)FLDSDELER;TDASSAS(0.047)S(0.953)FLDSDELER	216.0	2.8849999999999998e-30	34491000.0	4481.299999999999	3546.1000000000004	4900.2	5111.6	3261.3999999999996	3848.3	3819.8	3786.8	4240.1	5460.5	True	False	4284.307417757111	4132.03275160605	3871.714985195151	4663.4739642709765	3690.3312655880036	4591.929510868543	4676.487385514729	3653.6160976213296	4042.978676480303	4471.55053667315	0.9581256842832533	0.9240715760042146	0.8658551331225076	1.0429210015684218	0.8252911904544018	1.0269210810004519	1.0458312719851428	0.8170803544892132	0.9041558724031091	1.0	12.126559465888604	-6.230983272497753	19.887183533202357	0.9368838371794701	0.9581261754307642	0.004079017810755148	0.08263771760036426	6163.657487815652	4023662.5788289323	0.020262817493237228	1.3144216051727247	5.875119809976285e-07	6.230983272497753	0.02124233825129407	
TDASSASSFLDS(ph)DELER	ddPTM_K562_Methotrexat_30min_R1	1	TDASSASSFLDSDELER	17	0	G3XAC6;Q14498-2;Q14498;H0Y4X3;Q14498-3;A0A0U1RQW2;A0A0U1RQH7	G3XAC6	RBM39	RNA-binding protein 39	1	TDASSAS(0.001)S(0.001)FLDS(0.997)DELER	86.772	0.0093069	5821600.0	398.83	505.85	640.81	863.99	664.07	518.01	587.32	639.01	686.39	551.14	True	False	381.2979107455577	589.4331145201546	506.31273818678966	788.2453381310121	751.406844771885	618.1081012200228	719.0414606158727	616.5356561056842	654.4798787173213	451.3232053442069	0.8448444623066887	1.3060110970155336	1.121840694631787	1.7465207390119628	1.6648974302103872	1.3695464667025385	1.5931852209271786	1.3660623890045187	1.4501356698868932	1.0	8.818017148192911	-6.200764192025029	1.2346747625367895	1.4663622180474505	0.5359353178309714	0.3879254855895371	0.21535756518489102	1.610519914166473	1.9207629333865666	0.06285511224120113	1.9806954894012594	6.298480773354208e-07	6.200764192025029	-0.9304269002164791	
TDDEVVQREEEAIQLDGLNASQIR	ddPTM_K562_Methotrexat_30min_R1	1	TDDEVVQREEEAIQLDGLNASQIR	24	1	P14625;Q96GW1;A0A1W2PRR1	P14625	HSP90B1	Endoplasmin	0		78.419	0.0033354	3670700.0	625.66	444.5	626.41	447.89	726.28	578.56	323.39	495.87	527.99	782.54	False	True	598.1567355441309	517.9460697918526	494.9351013991457	408.6241790940858	821.798550184355	690.3585317693793	395.9184396045884	478.42997103820863	503.4438601435898	640.8144230323612	0.9334320733819125	0.8082621913235186	0.7723532486317828	0.637663829662976	1.2824282985010997	1.0773142846919288	0.6178363429010937	0.7465967585034331	0.7856312873878087	1.0	9.323762809124178	-13.550410378079247	2.077273678688847	3.0765763422234187	0.8507944225600255	0.05141617581772351	0.1916266065962219	9333919.279767018	422183.14025351993	91938573.03592087	0.05114537814617849	2.8157210132809805e-14	13.550410378079247	-2.225781919663393	
TDEVPAGGS(ph)RS(ph)EAEDEDDEDYVPYVPLR	ddPTM_K562_Methotrexat_30min_R1	1	TDEVPAGGSRSEAEDEDDEDYVPYVPLR	28	1	D6RGI7;A0A499FJW5;Q9UJV9;D6RD33	D6RGI7	DDX41	Probable ATP-dependent RNA helicase DDX41	2	T(0.093)DEVPAGGS(0.953)RS(0.953)EAEDEDDEDYVPYVPLR	80.711	0.00091367	28578000.0	1235.3	876.52	1303.9	1240.2	1058.9	767.63	951.15	983.58	1095.2	1351.3	True	False	1180.9976911064557	1021.3500317074347	1030.2292088477939	1131.473591534719	1198.163910324136	915.9636334038447	1164.4695996471885	948.9869339015486	1044.2843910476702	1106.5664756352778	1.0672632120256915	0.922990217213186	0.931014296503372	1.0225084678126923	1.0827762603564075	0.8277529218278474	1.0523268373720327	0.8575959554140088	0.9437159122755353	1.0	10.111874406554412	-8.248960752394428	24.984066427587415	0.9346310979856794	0.997565009780374	0.16596005288353632	0.07635224308091612	1576.414253962562	3156218.94311938	0.024794603825778003	0.024630943278704926	5.636885945988853e-09	8.248960752394428	0.06293391179469454	
TDEVPAGGSRS(ph)EAEDEDDEDYVPYVPLR	ddPTM_K562_Methotrexat_30min_R1	4	TDEVPAGGSRSEAEDEDDEDYVPYVPLR	28	1	D6RGI7;A0A499FJW5;Q9UJV9;D6RD33	D6RGI7	DDX41	Probable ATP-dependent RNA helicase DDX41	1	T(0.002)DEVPAGGS(0.189)RS(0.809)EAEDEDDEDYVPYVPLR;T(0.001)DEVPAGGS(0.183)RS(0.816)EAEDEDDEDYVPYVPLR;T(0.01)DEVPAGGS(0.151)RS(0.839)EAEDEDDEDYVPYVPLR;T(0.006)DEVPAGGS(0.206)RS(0.787)EAEDEDDEDYVPYVPLR	107.88	1.3725e-11	302826000.0	4732.45	4021.28	6006.0	5296.63	4228.79	3930.9999999999995	3762.4	5002.99	4789.81	5357.9	True	False	4524.41716447563	4685.728169927066	4745.422676846266	4832.282671448586	4784.950006931349	4690.610115433887	4606.213974360076	4827.032005978274	4567.1327785646845	4387.532390887478	1.031198578470315	1.0679643481741388	1.081569833353731	1.101366836968501	1.0905788449264266	1.0690770340923008	1.0498415883895877	1.1001701129326358	1.0409342590952082	1.0	12.099194060791591	-10.01375891365654	6.165849424523584	1.0000186944430878	1.074410402570193	0.5603246722958268	0.020609188292114857	0.09986459536613275	19.71514805050596	0.02048787970652809	0.005315141388418981	9.688155176476166e-11	10.01375891365654	0.07439170812710527	
TDGFAEAIHS(ph)PQVAGVPR	ddPTM_K562_Methotrexat_30min_R1	3	TDGFAEAIHSPQVAGVPR	18	0	P12270	P12270	TPR	Nucleoprotein TPR	1	T(0.002)DGFAEAIHS(0.998)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR	143.58	6.1621e-10	451940000.0	13054.8	8833.3	12847.7	9209.5	7761.1	7404.099999999999	7393.5	11455.1	11772.5	12377.1	True	False	12480.926623376155	10292.852684572263	10151.143344208764	8402.117433671174	8781.820686010622	8834.837536424338	9051.68058139252	11052.21764018751	11225.199044566012	10135.487253448822	1.231408644821614	1.0155261831215754	1.0015446806224944	0.8289801194128253	0.8664428720999491	0.8716736862767097	0.8930681234207548	1.0904475891306311	1.107514494751734	1.0	13.307127826147749	-12.52359161137819	17.20296778613452	1.000000000133571	0.9790441892664647	0.0	0.12188476270911748	6.068284461568624e-10	1.0231766071146622e-25	0.1275013328641214	0.030923615459165207	2.995079734701542e-13	12.52359161137819	-0.020955810867106184	
TDGS(ph)IS(ph)GDRQPVTVADYISR	ddPTM_K562_Methotrexat_30min_R1	1	TDGSISGDRQPVTVADYISR	20	1	P51116	P51116	FXR2	Fragile X mental retardation syndrome-related protein 2	2	T(0.214)DGS(0.801)IS(0.843)GDRQPVT(0.139)VADY(0.001)IS(0.003)R	74.987	0.03395	0.0	1302.4	1298.7	1821.5	1054.4	1050.6	1176.4	1037.1	1264.0	1562.3	1312.6	True	False	1245.1480554497264	1513.2881008744191	1439.1920422703095	961.962389061609	1188.7723148423245	1403.722650673219	1269.6960750608202	1219.5444035579792	1489.66901400089	1074.8754206459444	1.158411506611117	1.4078730165445699	1.3389384617292948	0.8949524480553472	1.1059628790543317	1.3059398547132601	1.181249520337714	1.1345913955545623	1.3858992264477275	1.0	10.069953744075564	-12.571261991523643	2.7963655705554653	0.9867900362251059	1.209145955964858	0.158657950352055	0.14670521723910102	51664143.206496894	52186287.538527615	5081673.787990132	0.03875328566731805	2.683724979265152e-13	12.571261991523643	0.22235591973975222	
TDNSSLS(ph)SPLNPK	ddPTM_K562_Methotrexat_30min_R1	1	TDNSSLSSPLNPK	13	0	Q9UIG0-2;Q9UIG0	Q9UIG0-2	BAZ1B	Tyrosine-protein kinase BAZ1B	1	TDNS(0.005)S(0.057)LS(0.469)S(0.469)PLNPK	124.48	0.00087453	14431000.0	1828.6	1291.3	2525.3	1725.4	1450.2	1111.5	1328.6	1694.5	1486.8	2104.9	True	False	1748.2169335038177	1504.665376652913	1995.2740402663817	1574.136860856316	1640.926719002797	1326.2816441884424	1626.572370384539	1634.9034745482568	1417.6789925216178	1723.6822131019712	1.0142339000863119	0.8729366499321755	1.15756490674441	0.9132407638084687	0.9519891233603636	0.7694467310198907	0.9436614000079101	0.9484947179480685	0.8224712082921224	1.0	10.751278100943999	-7.486734703423158	24.993231484404994	0.9015918670569717	1.0064957409298914	0.23046910079362026	0.0897975419897607	868.1245327861427	600299.231650251	0.02449964316215353	0.03632324386489272	3.2603580500425745e-08	7.486734703423158	0.10490387387291966	
TDRVGVEASEETPQTSSSSARPGT(ph)PSDHQSQEASQFER	ddPTM_K562_Methotrexat_30min_R1	1	TDRVGVEASEETPQTSSSSARPGTPSDHQSQEASQFER	38	2	I1E4Y6;Q6Y7W6;Q6Y7W6-4;Q6Y7W6-5;C9JHW1;E7ESB6	I1E4Y6	GIGYF2	PERQ amino acid-rich with GYF domain-containing protein 2	1	TDRVGVEASEET(0.001)PQT(0.023)S(0.063)S(0.063)S(0.063)S(0.179)ARPGT(0.532)PS(0.063)DHQS(0.013)QEAS(0.003)QFER	56.527	0.001261	64416000.0	923.38	1060.2	1446.1	1421.7	993.03	1083.7	835.2	1187.5	1112.5	1415.2	True	False	882.7893208239935	1235.380029681265	1142.5833721257725	1297.0617683316475	1123.6308507594458	1293.1096876356405	1022.514860563877	1145.7349519185923	1060.7801178237153	1158.8935664316173	0.7617518522794252	1.065999558082939	0.9859260636366582	1.119224237585051	0.9695720843625443	1.1158140187258887	0.8823199042448153	0.9886455366617125	0.9153386890307744	1.0	10.178532359002851	-11.921495141175303	14.237684087349827	0.9999794154357142	0.9865081875405506	0.0	0.10362425931556526	0.0	0.0	0.09600503263046149	0.023284640595662525	1.198132527650817e-12	11.921495141175303	-0.01347122789516364	
TDS(ph)PDMHEDT	ddPTM_K562_Methotrexat_30min_R1	1	TDSPDMHEDT	10	0	Q9BW61	Q9BW61	DDA1	DET1- and DDB1-associated protein 1	1	T(0.1)DS(0.9)PDMHEDT	76.143	0.031969	4443400.0	2347.0	2345.8	3180.5	3240.7	2233.0	2031.7	1896.1	2521.6	2317.2	3200.8	True	False	2243.8286902184514	2733.403578217612	2512.9565141041567	2956.5928625113374	2526.6786398657046	2424.2972708031125	2321.3486914693112	2432.913898743514	2209.4738777717866	2621.104103613851	0.8560624078703206	1.042844339699796	0.958739681739239	1.1279952056978322	0.9639749281159962	0.9249145302777594	0.8856377311640344	0.9282019342112855	0.8429554075038346	1.0	11.355958939657995	-8.181359626923554	3.7665024237520353	0.9093383546548008	1.0013059500505417	0.1987091291468963	0.07408978687800294	0.3387206231653411	9.179402475988258	0.02481035283981756	0.02450303169361881	6.586282780029283e-09	8.181359626923554	0.09196759539574084	
TDSQSVRHS(ph)PIAPSSPSPQVLAQK	ddPTM_K562_Methotrexat_30min_R1	2	TDSQSVRHSPIAPSSPSPQVLAQK	24	1	Q9NQS7;Q9NQS7-2	Q9NQS7	INCENP	Inner centromere protein	1	T(0.008)DS(0.05)QS(0.05)VRHS(0.872)PIAPS(0.008)S(0.011)PS(0.002)PQVLAQK;T(0.004)DS(0.085)QS(0.417)VRHS(0.486)PIAPS(0.007)S(0.001)PSPQVLAQK	129.22	3.6931e-12	105423000.0	6605.5	4808.5	8666.5	6235.6	4841.5	4695.3	4096.1	6107.7	5420.799999999999	8596.0	True	False	6315.130129202374	5603.022894474973	6847.520084729966	5688.934629393558	5478.242111468793	5602.600273466481	5014.754693912476	5892.888729122681	5168.788191189932	7039.181103056943	0.897139885555703	0.7959765223317977	0.972772256385939	0.8081813134375806	0.7782499173220202	0.7959164839548466	0.7124059774132947	0.8371554365270619	0.7342882809117177	1.0	12.78119188862754	-6.2497057420499464	22.540517116817696	0.8190474993806824	0.8971400780716583	0.04979230704454174	0.08837951016515394	1369.8816171672145	2631363.421698483	0.021430785772585104	0.30298121753246204	5.627224708961382e-07	6.2497057420499464	0.07809257869097586	
TDSREDEIS(ph)PPPPNPVVK	ddPTM_K562_Methotrexat_30min_R1	1	TDSREDEISPPPPNPVVK	18	1	K7EMU2;K7EMZ6;K7EIE5;K7EID3;K7EJ40;K7EK41;K7EPB2;P10644-2;P10644	K7EMU2	PRKAR1A	cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed	1	TDSREDEIS(1)PPPPNPVVK	185.71	4.242499999999999e-84	0.0	1628.8	1016.5	2126.3	1889.9	881.27	1120.3	1302.3	1214.1	1575.8	1695.5	True	False	1557.1999022700525	1184.459347454259	1680.0186876087625	1724.2154012590418	997.1724518380873	1336.7821196440052	1594.3739259007884	1171.3994148415686	1502.541401947516	1388.4285202690828	1.1215556865457224	0.8530935011510036	1.210014533037083	1.2418467181334494	0.718202224515549	0.9628022617865353	1.1483298582715606	0.8436872318169804	1.0821885174588013	1.0	10.439237190225185	-7.730039903820475	24.999986510230297	0.9610219235085771	1.0959026395936597	0.1916750746703504	0.1476322218380819	387.62974251463	308625.89658459736	0.04436089884496384	0.05726417064236151	1.8619160523401442e-08	7.730039903820475	0.13488071608508267	
TDSVIIADQT(ph)PT(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	1	TDSVIIADQTPTPTR	15	0	K7ESA4;K7ELQ4;P17544-5;P17544-4;P17544-2;P17544-3;P17544;P17544-1	K7ESA4	ATF7	Cyclic AMP-dependent transcription factor ATF-7	2	T(0.229)DS(0.017)VIIADQT(0.739)PT(0.913)PT(0.102)R	97.073	0.0059784	0.0	2134.3	1471.3	1914.7	1555.4	907.97	1356.5	1323.2	1784.8	1550.7	1931.8	True	False	2040.4787275386611	1714.4073171760474	1512.830635923668	1419.0404969142892	1027.3839698337956	1618.6244267580946	1619.9612829239973	1722.0275723657287	1478.6082954689764	1581.9323004752675	1.2898647602843878	1.0837425322568985	0.95631819103078	0.8970298517123394	0.6494487592959153	1.0231944984445942	1.0240395764327617	1.0885595874414926	0.9346849388085388	1.0	10.627472144992081	-6.398843873659967	2.1128203823168064	0.9421792921448324	1.3323816782786908	0.47299263411346193	0.11231737234451869	0.48061742008448105	2.9922093681663675	0.03318252255869299	0.31931400437396557	3.991683752807815e-07	6.398843873659967	0.3902023861338584	
TDTPPSSVPTSVISTPS(ph)TEEIQSETPGDAQGSPPELKRPR	ddPTM_K562_Methotrexat_30min_R1	1	TDTPPSSVPTSVISTPSTEEIQSETPGDAQGSPPELKRPR	40	2	Q13112	Q13112	CHAF1B	Chromatin assembly factor 1 subunit B	1	TDTPPSSVPT(0.006)S(0.006)VIS(0.042)T(0.042)PS(0.297)T(0.297)EEIQS(0.11)ET(0.11)PGDAQGS(0.089)PPELKRPR	46.236999999999995	0.0021671	29995000.0	742.66	435.97	842.32	695.24	522.23	415.73	451.9	657.34	845.11	934.55	True	False	710.013555635975	508.00663227706224	665.5285429838746	634.2893886297355	590.9123986104198	496.06393876604716	553.2500784109387	634.2209796161413	805.8210205608988	765.2939390253443	0.9277658157599251	0.6638059004152632	0.8696378071822599	0.8288179956547777	0.7721378263664133	0.6482005324618401	0.7229249445194112	0.8287286064539677	1.0529562295856785	1.0	9.57987016362586	-9.672058245869062	4.376791351156384	1.0267456459696016	0.7727472924936837	0.5853315444795275	0.08276767964098117	0.14365637964244143	4.791863680542565	0.06418571842587371	0.021407218583006305	2.1278536474765033e-10	9.672058245869062	-0.2539983534759179	
TDTPPSSVPTSVISTPSTEEIQS(ph)ETPGDAQGSPPELKRPR	ddPTM_K562_Methotrexat_30min_R1	1	TDTPPSSVPTSVISTPSTEEIQSETPGDAQGSPPELKRPR	40	2	Q13112	Q13112	CHAF1B	Chromatin assembly factor 1 subunit B	1	TDTPPSSVPT(0.008)S(0.008)VIS(0.014)T(0.014)PS(0.105)T(0.105)EEIQS(0.328)ET(0.328)PGDAQGS(0.09)PPELKRPR	41.218	0.005264199999999999	15466000.0	664.09	590.86	998.95	712.5	642.95	764.57	646.13	671.94	794.34	1230.1	True	False	634.8973987589139	688.4895720972197	789.2840464594705	650.0362312276142	727.5091945820225	912.3123317113423	791.0411001630008	648.3074893407825	757.411306779407	1007.3169700872902	0.630285617747407	0.6834885071355026	0.7835508284855701	0.645314484448013	0.7222246980699425	0.905685458304435	0.7852951192656391	0.6435982998326759	0.7519096066789908	1.0	9.976302008938385	-15.999999999999998	0.20590449465983673	2.2320084925975614	0.6909632669811057	0.5288685085845252	0.07845786984541624	127.8780026472227	1.271439659825411	65.20723708225992	0.19058017794350646	1.000000000000004e-16	15.999999999999998	-1.5410452256164557	
TDTPPSSVPTSVISTPSTEEIQSETPGDAQGS(ph)PPELKRPR	ddPTM_K562_Methotrexat_30min_R1	1	TDTPPSSVPTSVISTPSTEEIQSETPGDAQGSPPELKRPR	40	2	Q13112	Q13112	CHAF1B	Chromatin assembly factor 1 subunit B	1	TDTPPSSVPT(0.001)S(0.001)VIS(0.005)T(0.005)PS(0.02)T(0.019)EEIQS(0.058)ET(0.058)PGDAQGS(0.832)PPELKRPR	51.715	0.00064993	26664000.0	1368.9	1030.0	1932.8	1509.7	1109.9	871.81	1141.5	1031.1	1506.4	2163.1	True	False	1308.7247950745782	1200.1899929934943	1527.1316932748034	1377.3469449604615	1255.8713042485208	1040.2749439675451	1397.5104326313053	994.8356285669561	1436.3677927996805	1771.3416291324413	0.7388325174266687	0.6775598638086078	0.8621327857702719	0.7775727292284389	0.7089944049153382	0.5872808084327842	0.7889559019260282	0.5616283229645552	0.8108925851323087	1.0	10.790626768419825	-10.011911998049289	24.80480594993372	1.0000000090697392	0.7151215374709805	0.5143261291016462	0.08536862562186297	427.0206908110383	889202.1342455158	0.08251315379373333	0.02130480470699536	9.729443534445367e-11	10.011911998049289	-0.2848784715987587	
TDVSNFDEEFTGEAPT(ph)LSPPRDAR	ddPTM_K562_Methotrexat_30min_R1	1	TDVSNFDEEFTGEAPTLSPPRDAR	24	1	Q16512;Q16512-2	Q16512	PKN1	Serine/threonine-protein kinase N1	1	TDVSNFDEEFTGEAPT(0.5)LS(0.5)PPRDAR	84.948	0.002799	23950000.0	689.52	450.74	960.71	870.19	483.05	440.83	544.45	868.66	912.33	967.32	True	False	659.209526407936	525.2171237299884	759.0700998789504	793.9017937571332	546.5795418661573	526.0141585313456	666.5567718319002	838.1087354388246	869.9159774329079	792.1289744775527	0.8321997397490939	0.6630449594100437	0.9582657929910894	1.0022380437235612	0.6900133178774996	0.6640511526273577	0.8414750543262561	1.0580458011797862	1.0981999213027898	1.0	9.62959153888051	-9.22789193493937	4.665190240406025	1.0608101147831217	0.803125720885535	0.509414249226678	0.1103777592859359	0.17467299809375897	9.515278716105698	0.06143703885376674	0.03276233231074287	5.917088501790176e-10	9.22789193493937	-0.2576843938975867	
TDVSNFDEEFTGEAPTLS(ph)PPRDAR	ddPTM_K562_Methotrexat_30min_R1	2	TDVSNFDEEFTGEAPTLSPPRDAR	24	1	Q16512;Q16512-2	Q16512	PKN1	Serine/threonine-protein kinase N1	1	TDVSNFDEEFTGEAPT(0.09)LS(0.91)PPRDAR;TDVSNFDEEFTGEAPT(0.344)LS(0.656)PPRDAR	137.87	1.7324e-16	52427000.0	2348.8999999999996	2029.94	2741.6	2080.48	2435.3999999999996	1660.58	1844.5900000000001	2811.8999999999996	3270.5	3376.6	True	False	2245.645168493445	2365.3530819196258	2166.1756261807745	1898.0875485535817	2755.6977875185567	1981.4635831816852	2258.2862627484724	2713.003883199909	3118.455168847157	2765.0650200770215	0.8121491365258716	0.8554421197132421	0.7834085674124348	0.6864531339305395	0.9966122921195525	0.7166065061017954	0.8167208533438275	0.9811718218200662	1.1278053666746295	1.0	11.433097690272078	-9.3774648376738	3.321355992419163	1.0621962854593714	0.8086875888706015	0.6134562003685455	0.08394104750774994	0.16424861685814196	3.345213734680421	0.052423727657829475	0.02207587498568358	4.193099444246992e-10	9.3774648376738	-0.25350869658876984	
TEAQDLCRAS(ph)PEPPGPESSSR	ddPTM_K562_Methotrexat_30min_R1	3	TEAQDLCRASPEPPGPESSSR	21	1	Q9C0C2;Q9C0C2-2	Q9C0C2	TNKS1BP1	182 kDa tankyrase-1-binding protein	1	T(0.003)EAQDLCRAS(0.997)PEPPGPESSSR;TEAQDLCRAS(1)PEPPGPESSSR;TEAQDLCRAS(1)PEPPGPESSSR	113.52	1.9467000000000002e-05	429208900.0	5701.18	4620.139999999999	6856.6	6518.3	5442.21	4717.03	4398.719999999999	5531.34	5115.35	6100.54	True	False	5450.562953600183	5383.539606047538	5417.493360983038	5946.850759313622	6157.956005671089	5628.529288426636	5385.244932303086	5336.799637006642	4877.538495019812	4995.673090558748	1.0910567714891362	1.0776404917731333	1.0844371244430469	1.1904003027244698	1.2326579209734365	1.126680866901382	1.077981852431574	1.0682844013737776	0.9763526168751521	1.0	12.286463356872012	-9.363860207884134	1.5645901602927914	0.9899279044764476	1.1342881639858995	0.5743141676716469	0.04773504678733093	0.3415886200727157	1.4820237567962988	0.04592022471586927	0.016500143870060335	4.326530723977288e-10	9.363860207884134	0.14436025950945186	
TEDSIRDYEDGMEVDTTPTVAGQFEDADVDH	ddPTM_K562_Methotrexat_30min_R1	3	TEDSIRDYEDGMEVDTTPTVAGQFEDADVDH	31	1	P54105;E9PMI6;J3KN38	P54105	CLNS1A	Methylosome subunit pICln	0	;;	112.28	4.1238e-17	37849000.0	1082.76	1012.6600000000001	1444.8999999999999	1344.67	1265.37	1108.3999999999999	884.13	1425.6100000000001	1271.21	1291.35	False	True	1035.1631668602167	1179.9848527230993	1141.6352357268013	1226.784868834858	1431.788334315659	1322.5826130620508	1082.418658609125	1375.4704882565593	1212.1117245651112	1057.4740015626548	0.9789017652732181	1.1158523528516135	1.0795870480406888	1.160108775272024	1.35397024626598	1.2506998858673013	1.0235889081051721	1.3007132905622203	1.1462331204114187	1.0	10.046406479186794	-6.575089071928554	1.224531673819253	1.1897850540678174	0.9656682134234422	0.2128990764027443	0.10779867132517039	1.2970385229618853	2.4798707046189783	0.033617897175549014	0.3225576153148316	2.6601794125006206e-07	6.575089071928554	-0.2241168406443752	
TEEAIIYS(ph)YGFATIAS(ph)AIPAYS(ph)KR	ddPTM_K562_Methotrexat_30min_R1	1	TEEAIIYSYGFATIASAIPAYSKR	24	1	O15269	O15269	SPTLC1	Serine palmitoyltransferase 1	3	T(0.007)EEAIIY(0.125)S(0.579)Y(0.294)GFAT(0.069)IAS(0.812)AIPAY(0.248)S(0.868)KR	44.721000000000004	0.028758	0.0	1144.7	1029.7	989.26	1255.9	1201.7	1310.2	1049.0	1208.3	1500.7	1368.0	True	False	1094.380358625079	1199.8404230926221	781.6278450377853	1145.7971969105406	1359.7446133124133	1563.3776070316667	1284.2649529831272	1165.8034041290398	1430.9327845555501	1120.2419438089682	0.9769142859479476	1.0710547214586599	0.6977312797092287	1.0228122623356533	1.2137954848299153	1.3955713903337519	1.1464174860445409	1.0406710894658673	1.2773426244782378	1.0	10.129594636085653	-7.606901541005211	4.645006534872453	1.1887903935416928	0.9205082845615469	0.43085844292547526	0.13677939570103387	0.19773409214577206	7.698623523572444	0.04171653639931192	0.054739740539900474	2.4722845736502334e-08	7.606901541005211	-0.26828210898014593	
TEEARPSPAPGPGT(ph)PT(ph)GTPTRTPSR	ddPTM_K562_Methotrexat_30min_R1	1	TEEARPSPAPGPGTPTGTPTRTPSR	25	2	Q4KMP7	Q4KMP7	TBC1D10B	TBC1 domain family member 10B	2	T(0.022)EEARPS(0.012)PAPGPGT(0.954)PT(0.551)GT(0.066)PT(0.13)RT(0.098)PS(0.166)R	57.613	0.010733	12129000.0	2708.9	2231.2	3442.9	3194.3	2472.2	2580.2	2356.6	2770.0	3113.6	3618.4	True	False	2589.8199995452756	2599.8678760845496	2720.2823400123234	2914.2606784706904	2797.33763254635	3078.787133004964	2885.1275387988917	2672.5775299490538	2968.849415600827	2963.072696987114	0.8740318798720781	0.8774229126163948	0.918061289140269	0.9835265538486261	0.9440664872619274	1.0390521758495868	0.9736944833424176	0.9019615120029154	1.0019495703293364	1.0	11.532878306943804	-7.025897191716448	2.3947491409735604	0.9750815492489137	0.8739642790083842	0.5908203229372699	0.034564245664262076	0.21576574636578963	2.4439642170276197	0.010098481398950851	0.023786227193281086	9.421125915623046e-08	7.025897191716448	-0.10111727024052941	
TEEARPSPAPGPGT(ph)PTGTPTR	ddPTM_K562_Methotrexat_30min_R1	5	TEEARPSPAPGPGTPTGTPTR	21	1	Q4KMP7	Q4KMP7	TBC1D10B	TBC1 domain family member 10B	1	T(0.003)EEARPS(0.001)PAPGPGT(0.457)PT(0.457)GT(0.073)PT(0.009)R;TEEARPSPAPGPGT(0.446)PT(0.16)GT(0.319)PT(0.074)R;TEEARPS(0.001)PAPGPGT(0.996)PT(0.003)GTPTR;T(0.178)EEARPS(0.005)PAPGPGT(0.746)PT(0.064)GT(0.006)PT(0.001)R;TEEARPSPAPGPGT(0.979)PT(0.02)GTPTR	208.08	9.064e-32	118005000.0	3858.99	3638.2200000000003	5031.83	4246.72	3657.84	3849.06	3836.19	4644.75	4352.549999999999	4959.72	True	False	3689.3534202241585	4239.374015833778	3975.7176470255345	3874.416651058152	4138.910074360222	4592.836370112431	4696.553260232931	4481.391509830635	4150.2009005245945	4061.4666473305697	0.9083795930342096	1.0438037250952532	0.9788871834362115	0.9539452093259568	1.0190678475915966	1.1308319799033948	1.1563687869552683	1.1033924192818534	1.0218478350061908	1.0	11.987785081713142	-8.056901189222414	4.674321572287819	1.0929558376097335	0.9775661058607286	0.48047223867482347	0.05391926415222245	0.18120015437087303	8.2214476898454	0.01797510281041705	0.01846224493293761	8.772003792673625e-09	8.056901189222414	-0.11538973174900491	
TEEARPSPAPGPGTPTGTPTRT(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	1	TEEARPSPAPGPGTPTGTPTRTPSR	25	2	Q4KMP7	Q4KMP7	TBC1D10B	TBC1 domain family member 10B	1	TEEARPSPAPGPGT(0.001)PT(0.124)GT(0.024)PT(0.33)RT(0.422)PS(0.098)R	52.898	0.017240000000000002	7704700.0	815.66	542.82	691.33	729.31	534.49	444.28	546.95	691.84	750.02	1076.9	True	False	779.8045630437069	632.511778637601	546.2292805834381	665.3725246268227	604.7848035028309	530.1308222042655	669.6174604710403	667.5075950613553	715.1517339057465	881.8629746256419	0.8842695356098156	0.7172449653032632	0.6194038034257159	0.7545078359926369	0.6858036009047404	0.6011487469800061	0.759321436252949	0.756928926905813	0.8109556183706821	1.0	9.784410694553385	-10.170972941666047	1.1955822900316115	0.9991474647980065	0.7096402043539685	0.5674332630748193	0.07441082878165632	0.517139763648232	1.5064926526813727	0.07213072262043382	0.022368385381808947	6.745700548798949e-11	10.170972941666047	-0.2895072604440381	
TEFLDLDNSPLSPPS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	TEFLDLDNSPLSPPSPR	17	0	Q8NCF5	Q8NCF5	NFATC2IP	NFATC2-interacting protein	1	TEFLDLDNSPLSPPS(1)PR;TEFLDLDNSPLSPPS(1)PR	238.72	2.8287000000000002e-52	53844000.0	2307.33	2307.77	2866.8	2585.5	2436.2	2295.8	2061.45	2542.5	3018.2	3051.7	True	False	2205.902535918933	2689.0897671170833	2265.0978571400065	2358.8332292477144	2756.6030015409024	2739.4308580547254	2523.782638062028	2453.07883389728	2877.8845407780113	2499.0075584223914	0.8827114301773086	1.0760630787426229	0.9063989620623434	0.9439080011173843	1.1030790972401578	1.0962075119869232	1.009913967469261	0.9816212142415024	1.1516109789579039	1.0	11.287139549624923	-7.749091531691338	24.995322381240577	1.0557520513628593	0.9578361538269479	0.3619491288409077	0.06799363849899916	271.24266832106167	549064.5619244463	0.01979933594497749	0.02537230961428166	1.7820031537594404e-08	7.749091531691338	-0.09791589753591146	
TEFLHSQNSLS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	TEFLHSQNSLSPR	13	0	Q96FS4;F6RY50	Q96FS4	SIPA1	Signal-induced proliferation-associated protein 1	1	TEFLHS(0.001)QNS(0.092)LS(0.907)PR;TEFLHS(0.024)QNS(0.01)LS(0.965)PR	93.181	0.009108100000000001	88205000.0	4836.8	4298.3	6839.4	4755.7	4594.299999999999	4447.0	3749.5	5117.4	4855.4	5375.4	True	False	4624.180063420795	5008.521016392174	5403.903405931127	4338.7751647005825	5198.530978564712	5306.319812600995	4590.420820982111	4937.418141430068	4629.673513780915	4401.862971309012	1.0505052278003262	1.1378184757311416	1.2276400790195727	0.985667930369566	1.1809842815299607	1.205471375912235	1.0428359199053	1.12166557060312	1.0517532108465786	1.0	12.103898519921103	-9.949350507055852	1.0806286264567615	0.9999550141897999	1.1264767683944137	0.2252598632426961	0.07204124516759296	0.7752778808626332	2.037794189230677	0.06760092437920327	0.02214555258886983	1.1236977025855423e-10	9.949350507055852	0.12652175420461376	
TEPAAEAEAASGPSES(ph)PSPPAAEELPGSHAEPPVPAQGEAPGEQAR	ddPTM_K562_Methotrexat_30min_R1	1	TEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQAR	46	0	P55884-2;P55884	P55884-2	EIF3B	Eukaryotic translation initiation factor 3 subunit B	1	TEPAAEAEAAS(0.008)GPS(0.301)ES(0.336)PS(0.336)PPAAEELPGS(0.018)HAEPPVPAQGEAPGEQAR	96.794	2.2047e-24	97101000.0	1715.9	1378.4	1859.9	1701.9	1519.5	1428.9	1444.3	1484.7	1533.4	1862.5	True	False	1640.4710905606464	1606.157171206052	1469.5324070373586	1552.697069370213	1719.3408836882857	1705.014702097044	1768.2210406039362	1432.4822594640295	1462.1125686929304	1525.1832020059965	1.0755895346886968	1.053091306731909	0.9635120588166437	1.018039713083667	1.1273012195695071	1.1179081305475462	1.1593499313907236	0.9392197983691126	0.9586471754802227	1.0	10.57476683143664	-9.28638407801876	24.964853552661484	0.9617000968844925	1.0701626264109831	0.4471036306285362	0.05467396500737923	824.7307897889225	825391.6755262428	0.03367247706552606	0.01618509581750659	5.171492771496893e-10	9.28638407801876	0.1084625295264906	
TEPAAEAEAASGPSESPS(ph)PPAAEELPGSHAEPPVPAQGEAPGEQAR	ddPTM_K562_Methotrexat_30min_R1	1	TEPAAEAEAASGPSESPSPPAAEELPGSHAEPPVPAQGEAPGEQAR	46	0	P55884-2;P55884	P55884-2	EIF3B	Eukaryotic translation initiation factor 3 subunit B	1	TEPAAEAEAAS(0.006)GPS(0.16)ES(0.376)PS(0.427)PPAAEELPGS(0.032)HAEPPVPAQGEAPGEQAR	88.77	1.6855999999999999e-21	79532000.0	823.09	929.67	1148.7	845.1	730.81	716.82	732.2	852.19	1032.0	1112.2	True	False	786.9079491401377	1083.282165811905	907.6035679143043	771.0113951023953	826.9243245858739	855.3353200064414	896.4144886313118	822.2179946741098	984.0225452531006	910.7698025616489	0.8640031179413997	1.189413793436107	0.9965235621136767	0.8465491422023805	0.9079399890730352	0.9391344745957855	0.9842382631813646	0.9027725692721953	1.080429481176714	1.0	9.830942648117091	-7.001813847490522	24.999429293381002	0.9446288327375728	1.0432734992761614	0.0879291743396392	0.0945089287682895	124.71434227374786	1718983.7449870887	0.023586960590936484	0.04794811656229096	9.958321714134445e-08	7.001813847490522	0.09864466653858861	
TEPSS(ph)PLSDPSDIIR	ddPTM_K562_Methotrexat_30min_R1	2	TEPSSPLSDPSDIIR	15	0	Q9ULJ3;Q9ULJ3-2	Q9ULJ3	ZBTB21	Zinc finger and BTB domain-containing protein 21	1	TEPS(0.039)S(0.961)PLSDPSDIIR;TEPS(0.025)S(0.974)PLS(0.001)DPSDIIR	217.19	5.3567999999999995e-27	27739000.0	3768.8	3131.0	4709.8	3818.1000000000004	3446.5	3295.8	3126.8	3578.7999999999997	3455.2	3700.3999999999996	True	False	3603.1280646337	3648.344532099644	3721.277343225199	3483.373100982674	3899.7751600076836	3932.666705277795	3828.064494745129	3452.9315755168514	3294.5685061613503	3030.2217023908665	1.1890641736843235	1.2039860084234344	1.2280544820496415	1.149543975028054	1.2869603425157747	1.2978148437703065	1.263295187848717	1.139498002008389	1.0872367865235446	1.0	11.565207635204834	-9.743841188997001	1.8554540879643016	1.0094820797911448	1.2308792341246249	0.7449628697335144	0.044770404641693046	0.1754852645923555	1.1615590590783835	0.04565114421143737	0.013496732685215469	1.8036771814645166e-10	9.743841188997001	0.22139715433348006	
TES(ph)PATAAETASEELDNR	ddPTM_K562_Methotrexat_30min_R1	2	TESPATAAETASEELDNR	18	0	C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3	C9JWF0	SMC4	Structural maintenance of chromosomes protein 4	1	T(0.126)ES(0.873)PAT(0.001)AAETASEELDNR;T(0.131)ES(0.869)PATAAETASEELDNR	216.72	8.6399e-35	331920000.0	3652.5	2856.4	4115.9	3384.4	2807.72	2995.4	2790.0	2988.6000000000004	3721.8	4056.8	True	False	3491.940473380014	3328.3715495015695	3252.0288371014894	3087.6949066199827	3176.984393517125	3574.2186567719823	3415.728521280196	2883.489244045396	3548.774330351734	3322.0742088042584	1.0511325918384276	1.0018956050652394	0.9789151694693837	0.9294479028905746	0.9563255345402544	1.075899703654868	1.0281915172839102	0.8679785768793148	1.0682405350689241	1.0	11.697868585379029	-9.508319934831267	0.0023224625253275614	0.45465965860364055	1.5258847358245855	0.0	0.06211674512129393	341736.38526962604	810.2498250505768	186930.10691575432	186777.63015275734	3.102273372151883e-10	9.508319934831267	1.0712250772209448	
TES(ph)VPSDINNPVDR	ddPTM_K562_Methotrexat_30min_R1	1	TESVPSDINNPVDR	14	0	A0A2R8Y4X0;A0A0A0MQW1;A0A2R8Y5H9;Q8IVT5-4;Q8IVT5-3;Q8IVT5-2;Q8IVT5;A8MY87	A0A2R8Y4X0	KSR1	Kinase suppressor of Ras 1	1	T(0.42)ES(0.579)VPS(0.001)DINNPVDR	206.67	2.4574e-13	41868000.0	1786.1	1474.4	1690.8	1592.4	1355.9	1301.7	1087.7	1651.8	1669.2	2109.2	True	False	1707.585182615754	1718.0195394850564	1335.9241861491291	1452.796764360495	1534.2246161190812	1553.2351023302708	1331.644413117013	1593.705257750847	1591.5992563337948	1727.203441434121	0.9886416050664665	0.9946827908463179	0.7734608177018758	0.8411266035657141	0.8882709351512137	0.8992774476182135	0.7709829549733471	0.9227084774840255	0.9214891645956123	1.0	10.754222307692226	-10.031788654248928	1.9581722874391823	0.9982251964284662	0.8793856714675121	0.1944345827467524	0.07183702412758686	0.6276639139344504	5.481868514272689	0.07237551072316255	0.020321079710095283	9.294185704631111e-11	10.031788654248928	-0.11883952496095407	
TESSPSEASQHSMQS(ph)PQK	ddPTM_K562_Methotrexat_30min_R1	2	TESSPSEASQHSMQSPQK	18	0	Q9UQR0	Q9UQR0	SCML2	Sex comb on midleg-like protein 2	1	TESSPSEASQHS(0.139)MQS(0.861)PQK;TESSPSEASQHS(0.008)MQS(0.992)PQK	101.01	0.0096928	17011000.0	6462.3	4528.2	9574.099999999999	6597.9	4722.5	4082.6	3744.3	6085.7	6544.5	8105.6	True	False	6178.225029739533	5276.408083760331	7564.62724781782	6019.472350900596	5343.59152564523	4871.504669872906	4584.054588612697	5871.662481592403	6240.24762345825	6637.597295130103	0.9307923869187419	0.7949274186355875	1.1396634823519445	0.906875196438474	0.8050490694224153	0.7339259152475324	0.6906195698217401	0.884606615996476	0.9401365201888066	1.0	12.696445388024895	-7.613031050115755	5.350114541462118	0.8244808812145699	0.9518523302848095	0.1503382418060838	0.11614011778793482	0.34852597470057256	16.129428124068056	0.035626874931017474	0.046366010555216434	2.4376365320137188e-08	7.613031050115755	0.12737144907023967	
TESSPSEASQHSMQS(ph)PQKTTLILPTQQVR	ddPTM_K562_Methotrexat_30min_R1	1	TESSPSEASQHSMQSPQKTTLILPTQQVR	29	1	Q9UQR0	Q9UQR0	SCML2	Sex comb on midleg-like protein 2	1	TESSPS(0.001)EAS(0.005)QHS(0.067)MQS(0.593)PQKT(0.165)T(0.165)LILPT(0.003)QQVR	50.18899999999999	0.0052907	15611000.0	678.38	499.96	1063.7	1159.0	559.67	545.01	703.29	731.22	705.54	1011.5	True	False	648.5592274692763	582.5698921330361	840.4439063205754	1057.3922694635858	633.2764148560859	650.3254690950454	861.0206852082966	705.5025781405587	672.7395993971631	828.3075483645997	0.7829932598704233	0.7033255863516577	1.014651994877914	1.2765696407708564	0.7645426099356684	0.7851256099006221	1.0394939499323474	0.851739887597903	0.8121857644849573	1.0	9.694022725758039	-6.755458349923557	24.994170954255026	0.9410857197476143	0.7431593653595734	0.22960408470275395	0.1464168527890072	221.71341742378186	926493.5674821121	0.03970453095600602	0.09939962943939912	1.756069298165763e-07	6.755458349923557	-0.19792635438804096	
TFDHYCEYR	ddPTM_K562_Methotrexat_30min_R1	1	TFDHYCEYR	9	0	A0A2R8Y6H2;A0A2R8YFZ7;Q14204;A0A2R8YGC7	A0A2R8Y6H2	DYNC1H1	Cytoplasmic dynein 1 heavy chain 1	0		96.34200000000001	0.01369	6948800.0	2702.4	2406.7	2776.8	2715.7	2418.5	2210.0	2732.4	3022.7	2965.9	2845.6	False	True	2583.6057317623954	2804.3662680946063	2193.9876272172355	2477.618797396256	2736.575141296555	2637.051222362984	3345.210255034411	2916.3899277173314	2828.0159563625693	2330.2342655722227	1.1087321862585149	1.2034696723532874	0.9415309265819547	1.0632488046380353	1.174377693147753	1.1316678590319407	1.4355682192377968	1.2515436627146024	1.2136187327363452	1.0	11.186259285374243	-8.21563742958347	2.15238677728479	1.2430833347709647	1.0832791743432255	0.17849772130138286	0.11984247840513221	0.4496223749561436	4.091194856114909	0.046211322014420984	0.043873957747574965	6.08642914305981e-09	8.21563742958347	-0.15980416042773915	
TFEHVTSEIGAEEAEEVGVEHLLR	ddPTM_K562_Methotrexat_30min_R1	2	TFEHVTSEIGAEEAEEVGVEHLLR	24	0	H3BNT7;H3BTM8;P51665	H3BNT7	PSMD7	26S proteasome non-ATPase regulatory subunit 7	0	;	175.77	4.5434e-25	14398100.0	2905.4900000000002	1915.72	2740.34	2648.02	2238.21	2481.7	2342.98	2715.4	2776.8500000000004	2904.1	False	True	2777.7681385354936	2232.260168327667	2165.180082961856	2415.8721979162756	2532.573846186218	2961.2534020534913	2868.452907092857	2619.8978428966293	2647.754849598909	2378.1393486956326	1.168042629654587	0.9386582706148074	0.910451308982133	1.0158665425730156	1.0649392129083142	1.2451975968850129	1.2061752851724827	1.1016586745993657	1.1133724569383017	1.0	11.215617537921458	-7.959484359550264	3.852369449669818	1.1454439959802205	0.9974885915571842	0.2966401818775448	0.08870922064521777	0.24602729522591754	7.811874965571238	0.02925398719790509	0.032605137024347634	1.0977808244546747e-08	7.959484359550264	-0.14795540442303634	
TFLVWVNEEDHLR	ddPTM_K562_Methotrexat_30min_R1	2	TFLVWVNEEDHLR	13	0	P12277;H0YJG0	P12277	CKB	Creatine kinase B-type	0	;	156.08	6.5545e-09	12400700.0	3964.1	2900.0	3504.0	3792.6000000000004	2661.9	2878.2	3455.5	4555.2	4109.7	4628.8	False	True	3789.8429104793167	3379.1757084282845	2768.558284993228	3460.108646391366	3011.9865075945004	3434.371415477438	4230.483837019252	4394.99103408806	3918.640944018089	3790.47946601093	0.9998320646405497	0.8914903084765954	0.7303979113509976	0.9128419445133564	0.7946188693548816	0.9060519774010919	1.116081454853884	1.1594815572799588	1.0338114159848055	1.0	11.888164634241992	-8.685152014330308	4.828695605296982	1.0906261298683948	0.8617476397474658	0.6200302865310326	0.0785485545348304	0.12905497227458107	5.4870524250489705	0.03123446586497222	0.02353674541548414	2.064657345707372e-09	8.685152014330308	-0.22887849012092898	
TFNKDTVIIVS(ph)EPS(ph)EDEESQGLPTMAR	ddPTM_K562_Methotrexat_30min_R1	1	TFNKDTVIIVSEPSEDEESQGLPTMAR	27	1	D6RAY8;Q9H4L7;Q9H4L7-2	D6RAY8	SMARCAD1	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1	2	TFNKDTVIIVS(0.955)EPS(0.947)EDEES(0.056)QGLPT(0.042)MAR	70.704	0.00033416	201930000.0	4874.7	4294.5	8658.4	5570.2	3720.1	4013.6	3364.7	5003.4	4486.1	6245.9	True	False	4660.4140248009735	5004.0931309811285	6841.12016403692	5081.869214293415	4209.358355649087	4789.171396414516	4119.319625645689	4827.427586045881	4277.542190174357	5114.706985991547	0.9111790836826396	0.9783733740147041	1.3375390189064147	0.9935797354984225	0.8229911052926235	0.9363530324476793	0.8053872170835822	0.9438326768801256	0.8363220418862575	1.0	12.320435877132113	-7.526367855576467	21.238334752346304	0.8880361924453262	1.0825637628737572	0.3372638246596259	0.11703010525143193	16.942805415776824	103125.62574619016	0.03470451807817606	0.04516788296024288	2.9759946382693856e-08	7.526367855576467	0.19452757042843105	
TFNKDTVIIVSEPS(ph)EDEESQGLPTMAR	ddPTM_K562_Methotrexat_30min_R1	3	TFNKDTVIIVSEPSEDEESQGLPTMAR	27	1	D6RAY8;Q9H4L7;Q9H4L7-2	D6RAY8	SMARCAD1	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1	1	TFNKDTVIIVS(0.133)EPS(0.69)EDEES(0.069)QGLPT(0.108)MAR;TFNKDTVIIVS(0.004)EPS(0.976)EDEES(0.016)QGLPT(0.004)MAR;TFNKDTVIIVS(0.006)EPS(0.951)EDEES(0.033)QGLPT(0.01)MAR	70.771	0.00033995	55193000.0	9234.7	8993.1	16629.5	11538.7	7979.599999999999	8627.900000000001	7849.799999999999	11065.3	10038.0	12742.6	True	False	8828.75364531756	10479.0569184367	13139.195205563608	10527.120085987473	9029.057265863139	10295.119566255935	9610.317471808343	10676.127127128251	9571.335570979292	10434.791661681413	0.8460881569622959	1.0042420834253776	1.259171781437026	1.0088481329862204	0.8652839039441099	0.9866147691344542	0.9209879586862573	1.0231279620400155	0.9172521964312044	1.0	13.349114175863242	-7.528484140468225	24.870753762558756	0.9520301319264192	1.0500640029300399	0.11984820489081582	0.10280174769160864	266.96636235676374	1184504.135662976	0.031209149567683267	0.04041868879361717	2.9615281122706663e-08	7.528484140468225	0.09803387100362071	
TFRINQLLQDT(ph)PVAS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	TFRINQLLQDTPVASPR	17	1	A0A0A0MTS5;A0A0A6YYF2;A0A3B3ITG1;A0A0A0MSA0;Q16787-4;Q16787-1;Q16787-3;Q16787	A0A0A0MTS5	LAMA3	Laminin subunit alpha-3	2	TFRINQLLQDT(1)PVAS(1)PR	87.99	0.030683999999999996	37762000.0	1146.2	1122.8	1614.8	1557.0	1007.7	1172.6	1068.9	1224.2	1249.4	1212.9	True	False	1095.8144204211287	1308.3236156631995	1275.8755475476783	1420.5002273984499	1140.230212894165	1399.1883544537723	1308.6280345506811	1181.1441921168343	1191.315666704674	993.2320567586974	1.1032813660859855	1.3172386118232717	1.2845694406112471	1.430179601768085	1.1479998104523328	1.4087225084335964	1.3175451050394442	1.189192580001261	1.1994333636314565	1.0	9.955987015305244	-10.107448486868746	1.2269708208883083	1.0028313465872225	1.2904639116177186	0.42869879376177944	0.09784723445616253	0.5442214864757228	1.7611358728952984	0.0901896842958331	0.02788815967612467	7.808210504600804e-11	10.107448486868746	0.28763256503049606	
TFS(ph)ATVR	ddPTM_K562_Methotrexat_30min_R1	2	TFSATVR	7	0	Q9Y2V2;H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9	Q9Y2V2	CARHSP1	Calcium-regulated heat stable protein 1	1	T(0.025)FS(0.516)AT(0.459)VR;T(0.023)FS(0.809)AT(0.168)VR	100.02	0.010043999999999999	545030000.0	10509.8	8058.7	10101.7	9875.8	7994.099999999999	7496.8	7912.7	8838.3	9732.5	10987.8	True	False	10047.801776079192	9390.263200521042	7981.491217898428	9010.003947168656	9045.464270018107	8945.450499461915	9687.324397969101	8527.451979403875	9280.038199298262	8997.802946041069	1.116695023922491	1.04361734268171	0.8870489013554351	1.001355997814217	1.0052969957513915	0.994181641130273	1.076632201890064	0.947726020512136	1.0313671298371092	1.0	13.13535705657101	-6.521534248673589	24.99221979763162	0.9928895249476534	1.0984256429397379	0.3935842189710458	0.04727257868000417	41.308909937494434	767846.7594963525	0.011962897429820044	0.032608028969997566	3.009301844511811e-07	6.521534248673589	0.10553611799208451	
TFS(ph)DGLATR	ddPTM_K562_Methotrexat_30min_R1	1	TFSDGLATR	9	0	Q86UU1-3;Q86UU1-2;Q86UU1	Q86UU1-3	PHLDB1	Pleckstrin homology-like domain family B member 1	1	T(0.14)FS(0.86)DGLATR	97.163	0.0092355	9045100.0	1547.2	1499.9	2477.1	2352.5	1314.5	1658.2	1327.9	1086.4	1876.0	1934.7	True	False	1479.1869405649716	1747.7329810591677	1957.1905615744072	2146.2599774918776	1487.379790462817	1978.6236818652949	1625.7153775655818	1048.1906962226178	1788.785169471721	1584.3070823736932	0.9336491372296177	1.1031529180824093	1.2353606086529891	1.3546994780053856	0.9388203884276939	1.248888996254953	1.0261365335373294	0.6616082878656092	1.1290646803091153	1.0	10.629636281240943	-9.001000284499229	24.82724048691862	0.9059763748537968	1.1396155869627713	0.23779050292499548	0.16424490244510487	41.731010647189194	1035782.5839656378	0.06787605148073014	0.04510531447971861	9.976994102457345e-10	9.001000284499229	0.23363921210897454	
TFS(ph)LTEVR	ddPTM_K562_Methotrexat_30min_R1	4	TFSLTEVR	8	0	O95239;O95239-2	O95239	KIF4A	Chromosome-associated kinesin KIF4A	1	T(0.007)FS(0.501)LT(0.492)EVR;T(0.002)FS(0.867)LT(0.131)EVR;TFS(0.611)LT(0.389)EVR;T(0.296)FS(0.619)LT(0.086)EVR	105.98	0.013252000000000002	158911500.0	12897.800000000001	10208.699999999999	14772.7	13521.4	9834.800000000001	10213.400000000001	9178.400000000001	11430.6	11955.7	13861.5	True	False	12330.82815538965	11895.514156769594	11672.11215089026	12335.99985532781	11128.24858367723	12186.995002028107	11236.889842192879	11028.579319074246	11399.88211655281	11351.04802931873	1.0863162699638163	1.047966154847073	1.028284976042939	1.0867718842757987	0.9803719053019572	1.0736449154783065	0.9899429385876096	0.9715912830769832	1.0043021655011894	1.0	13.470537885602969	-8.307987799291267	0.6882962108727774	0.9867499457734648	1.0629077187736748	0.41741886885167956	0.03199343010133741	0.7135904024260639	0.7355627413407029	0.02370616575894223	0.023232067737955463	4.920533588259668e-09	8.307987799291267	0.0761577730002101	
TFSAQTDKY(ph)RGDTSQAADDSASTTGSRK	ddPTM_K562_Methotrexat_30min_R1	1	TFSAQTDKYRGDTSQAADDSASTTGSRK	28	3	Q9Y2K1-2;Q9Y2K1	Q9Y2K1-2	ZBTB1	Zinc finger and BTB domain-containing protein 1	1	T(0.009)FS(0.009)AQT(0.009)DKY(0.958)RGDT(0.007)S(0.007)QAADDS(0.001)ASTTGSRK	43.888000000000005	0.030804	4265100.0	311.66	515.76	382.04	385.39	507.39	680.9	606.69	565.12	432.91	814.63	True	False	297.959799571147	600.9805735789561	301.85502488550594	351.60345705657556	574.1206784959519	812.4742883741889	742.7556761919287	545.244409286935	412.78410859061984	667.0926130739037	0.4466543231503863	0.9008952607190338	0.45249343040179185	0.5270684312278889	0.8606311436285504	1.2179332711096578	1.1134221270557565	0.8173443965666132	0.6187808116905196	1.0	9.38174325575317	-7.883815790654897	5.018089044636562	0.9604233929932662	0.597083835056331	0.4546317517544589	0.19254700994245474	0.21253562426173594	8.4675172683764	0.06416289497115556	0.0734121509334434	1.3067250280741914e-08	7.883815790654897	-0.3633395579369352	
TFSAT(ph)VR	ddPTM_K562_Methotrexat_30min_R1	2	TFSATVR	7	0	Q9Y2V2;H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9	Q9Y2V2	CARHSP1	Calcium-regulated heat stable protein 1	1	T(0.01)FS(0.082)AT(0.908)VR;T(0.01)FS(0.082)AT(0.908)VR	93.195	0.033218	2172690000.0	11494.900000000001	9013.3	11711.8	11838.5	9421.0	8393.099999999999	9532.1	10472.099999999999	10283.9	11537.2	True	False	10989.597959604635	10502.59462509541	9253.653231216802	10800.637085456992	10660.026630620163	10014.947789327949	11669.916070858397	10103.790307357212	9805.80373365151	9447.701282246224	1.1632033688719485	1.1116560855741178	0.9794608185385719	1.1432026439863372	1.1283196104699136	1.0600406903367778	1.2352122195891266	1.0694443024298288	1.0379036593883657	1.0	13.20574763493537	-9.712862933170637	3.1899879259390613	1.0115290938431405	1.1128911076715007	0.2738088274821576	0.0634767479418843	0.34255325259188674	6.577619724474838	0.05651399892008746	0.016745078961758638	1.9370332107355824e-10	9.712862933170637	0.10136201382836019	
TGADTTAAGPLFQQRPYPS(ph)PGAVLR	ddPTM_K562_Methotrexat_30min_R1	2	TGADTTAAGPLFQQRPYPSPGAVLR	25	1	H7C053;O60828-5;O60828-4;O60828-2;O60828	H7C053	PQBP1	Polyglutamine-binding protein 1	1	TGADTTAAGPLFQQRPY(0.001)PS(0.999)PGAVLR;TGADTTAAGPLFQQRPYPS(1)PGAVLR	88.10799999999999	9.9636e-05	172032000.0	2443.1	2060.25	2794.6	2884.3	2337.5	2246.7	2285.3	2348.1	2459.2	2687.5	True	False	2335.7042492853416	2400.6712942377153	2208.0516504686293	2631.437897164642	2644.9222215342966	2680.842977956073	2797.836698810619	2265.5159920842502	2344.8723287659145	2200.7677075925462	1.061313395878752	1.0908335695564375	1.003309728169381	1.1956908891775828	1.2018179894267977	1.2181399103173358	1.2713003235908145	1.0294207717917367	1.065479251025092	1.0	11.10379116056394	-7.264845895030879	24.98680911214566	1.1527594333720708	1.055720364937351	0.17365342231272562	0.08529548686869128	478.40737538587973	3509134.494334389	0.02495320849638394	0.0387423283703235	5.4344313253865824e-08	7.264845895030879	-0.09703906843471977	
TGDLGIPPNPEDRS(ph)PS(ph)PEPIYNSEGK	ddPTM_K562_Methotrexat_30min_R1	4	TGDLGIPPNPEDRSPSPEPIYNSEGK	26	1	Q15637-4;Q15637-6;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5	Q15637-4	SF1	Splicing factor 1	2	T(0.003)GDLGIPPNPEDRS(0.986)PS(0.975)PEPIY(0.015)NS(0.021)EGK;T(0.035)GDLGIPPNPEDRS(0.984)PS(0.949)PEPIY(0.016)NS(0.016)EGK;T(0.002)GDLGIPPNPEDRS(0.992)PS(0.974)PEPIY(0.014)NS(0.018)EGK;T(0.004)GDLGIPPNPEDRS(0.988)PS(0.866)PEPIY(0.054)NS(0.088)EGK	61.038999999999994	0.010167	279141000.0	16427.8	11570.5	24979.3	16653.899999999998	10834.699999999999	11375.699999999999	10747.5	15328.099999999999	14734.5	21203.399999999998	True	False	15705.653582092309	13482.328460127414	19736.486292332007	15193.878443847812	12259.652959853536	13573.893027255472	13157.900459662686	14789.002034950205	14049.496311077346	17363.25879485314	0.904533749548663	0.7764860628653348	1.1366809955157926	0.8750591477880649	0.7060686651452533	0.7817595295693617	0.7578013214640896	0.8517411512252525	0.8091508902258563	1.0	14.083750122605723	-7.525282809503848	24.99738187479902	0.8041815557003729	0.9367773853197064	0.1932244788842622	0.10936448175167786	108.3565105266041	1126673.4050598817	0.031529065960284444	0.040964680962130275	2.983439191652025e-08	7.525282809503848	0.13259582961933358	
TGDLGIPPNPEDRS(ph)PS(ph)PEPIYNSEGKR	ddPTM_K562_Methotrexat_30min_R1	3	TGDLGIPPNPEDRSPSPEPIYNSEGKR	27	2	Q15637-4;Q15637-6;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-5	Q15637-4	SF1	Splicing factor 1	2	T(0.115)GDLGIPPNPEDRS(0.96)PS(0.852)PEPIY(0.021)NS(0.053)EGKR;T(0.077)GDLGIPPNPEDRS(0.975)PS(0.931)PEPIY(0.008)NS(0.009)EGKR;T(0.005)GDLGIPPNPEDRS(0.992)PS(0.967)PEPIY(0.016)NS(0.02)EGKR	56.946999999999996	0.0041386	219463000.0	9810.7	7716.0	14600.0	11226.1	6935.5	6363.599999999999	6465.2	8456.5	9586.7	12643.099999999999	True	False	9379.43337500049	8990.937850425053	11535.659520805108	10241.925242644653	7847.639814952355	7593.275637388729	7915.18567590707	8159.0801018101665	9141.016409474707	10353.312075856122	0.905935540847193	0.8684117492596287	1.1141999232985755	0.989241429950593	0.7579835087993742	0.7334151218233066	0.7645075911857471	0.788064731559392	0.8829074543972761	1.0	13.337804746407167	-7.75548243440818	24.947142465605832	0.803331128720595	0.9725698601860369	0.3627235365522443	0.0945103712931321	139.44917594244774	583996.8226942015	0.028521811280899728	0.03584197971328468	1.7559719152768417e-08	7.75548243440818	0.16923873146544188	
TGGIGDSRPPSFHPHAGGGS(ph)QENLDNDTETDSLVSAQR	ddPTM_K562_Methotrexat_30min_R1	2	TGGIGDSRPPSFHPHAGGGSQENLDNDTETDSLVSAQR	38	1	Q92997-2;Q92997	Q92997-2	DVL3	Segment polarity protein dishevelled homolog DVL-3	1	T(0.004)GGIGDS(0.013)RPPS(0.029)FHPHAGGGS(0.95)QENLDNDT(0.002)ET(0.001)DS(0.001)LVSAQR;TGGIGDS(0.001)RPPS(0.003)FHPHAGGGS(0.995)QENLDNDTETDSLVSAQR	81.569	2.6954e-09	74976000.0	3859.1	2835.6	4708.9	4476.5	3253.0	3264.7	3440.9	3544.3	3214.7	3950.3999999999996	True	False	3689.458584755868	3304.1347030411184	3720.566240925971	4084.0521952146164	3680.8265183533986	3895.557070429155	4212.609415366675	3419.6449600716373	3065.249298667775	3234.944279841335	1.1405014323575382	1.0213884435756577	1.150117565891569	1.2624799198751353	1.1378330505692458	1.2042114897324354	1.3022200850931789	1.0570954749920334	0.9475431517534876	1.0	11.659525147455174	-9.502304790286445	8.6939814776402	0.9827763844924642	1.1712160355517742	0.5577643603158344	0.07285086811749265	0.1917176499102782	75.89856834161678	0.045796359762668125	0.020525201188626434	3.145539981801935e-10	9.502304790286445	0.18843965105931004	
TGGKEAASGTT(ph)PQK	ddPTM_K562_Methotrexat_30min_R1	1	TGGKEAASGTTPQK	14	1	Q13428;Q13428-3;Q13428-4;E7ETY2;Q13428-6;Q13428-7;Q13428-2;Q13428-8;A0A6I8PRA0;A0A3B3IS06	Q13428	TCOF1	Treacle protein	1	TGGKEAASGT(0.029)T(0.971)PQK	111.11	0.0095152	24852000.0	4109.5	2628.7	8192.4	6036.5	2477.6	2217.6	2425.7	3254.4	3484.4	6111.8	True	False	3928.851300576364	3063.0479947398035	6472.927195770124	5507.2894172708675	2803.447827197166	2646.119814801879	2969.7249727847184	3139.9409073885213	3322.4110045347925	5004.893795447115	0.7850019323387816	0.612010588022111	1.2933195908489525	1.100380875670284	0.5601413220291358	0.5287064866808999	0.5933642339196563	0.6273741333422267	0.6638324688442231	1.0	12.289123739855736	-7.770303890061461	24.999993868382816	0.6334850110000125	0.9483906618379844	0.3045590195033189	0.2086105531823433	227.8325610770757	642539.3629041689	0.06707927437688879	0.07717684321378382	1.6970557514574366e-08	7.770303890061461	0.31490565083797184	
TGKEYIPGQPPLS(ph)QSSDSSPTRNSEPAGLETPEAK	ddPTM_K562_Methotrexat_30min_R1	2	TGKEYIPGQPPLSQSSDSSPTRNSEPAGLETPEAK	35	2	V9GYZ6;P07814	V9GYZ6	EPRS	Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase	1	TGKEYIPGQPPLS(0.359)QS(0.359)S(0.087)DS(0.087)S(0.087)PT(0.008)RNS(0.009)EPAGLET(0.003)PEAK;TGKEYIPGQPPLS(0.178)QS(0.178)S(0.178)DS(0.178)S(0.178)PT(0.049)RNS(0.056)EPAGLET(0.006)PEAK	54.255	0.0014614	99386000.0	12191.9	7650.3	21670.0	16529.6	7462.3	7213.5	6895.8	9137.5	9037.900000000001	18114.1	True	False	11655.958674168865	8914.38204213411	17121.763138071696	15080.475631859608	8443.723248665408	8607.40678394361	8442.358687112532	8816.128945815697	8617.73000168895	14833.460960782197	0.7857882057994255	0.600964405117768	1.154266235192143	1.0166525311746522	0.569234871820511	0.580269621951378	0.5691428796983432	0.5943406578629513	0.5809655632271621	1.0	13.856567627942976	-7.771757241280332	24.99758854310968	0.621280666989647	0.8877317764647296	0.2869991295317158	0.1825315632470101	249.60467165852933	604727.5169897282	0.05730753692697018	0.06568354819431302	1.6913861059600253e-08	7.771757241280332	0.26645110947508255	
TGKEYIPGQPPLSQSSDS(ph)SPTR	ddPTM_K562_Methotrexat_30min_R1	2	TGKEYIPGQPPLSQSSDSSPTR	22	1	V9GYZ6;P07814	V9GYZ6	EPRS	Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase	1	TGKEYIPGQPPLS(0.007)QS(0.022)S(0.022)DS(0.548)S(0.328)PT(0.072)R;TGKEYIPGQPPLS(0.041)QS(0.125)S(0.125)DS(0.384)S(0.265)PT(0.061)R	125.98	3.3175e-07	118205000.0	5796.6	3932.9	8380.6	6716.0	4523.799999999999	4284.4	3594.8999999999996	5056.4	5466.5	7782.700000000001	True	False	5541.788404652863	4582.744877130209	6621.626587675301	6127.218707262674	5118.75899284571	5112.299663842519	4401.147835537693	4878.563546005199	5212.363608164801	6373.1776140950715	0.8695487149764212	0.7190674973493444	1.038983532018746	0.9614071783770111	0.8031721854926718	0.8021586676850235	0.6905735414942791	0.765483694541268	0.8178594609754816	1.0	12.63779715244235	-7.873992215913508	8.307649143598308	0.7939460354132628	0.8944479052306167	0.11704564587669453	0.10552868991393156	0.4648118169705709	32.12836953004198	0.03333109788557452	0.03785685437981116	1.3366194732596395e-08	7.873992215913508	0.10050186981735387	
TGKEYIPGQPPLSQSSDSS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	2	TGKEYIPGQPPLSQSSDSSPTR	22	1	V9GYZ6;P07814	V9GYZ6	EPRS	Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase	1	TGKEYIPGQPPLS(0.001)QS(0.004)S(0.004)DS(0.247)S(0.714)PT(0.03)R;TGKEYIPGQPPLS(0.004)QS(0.013)S(0.013)DS(0.26)S(0.584)PT(0.127)R	142.01	2.0076e-13	183497000.0	9822.5	7363.200000000001	14082.0	11444.0	7604.9	7373.6	6742.0	8707.599999999999	9741.8	12438.2	True	False	9390.714661129405	8579.84364699971	11126.380641916281	10440.722287956227	8605.0776481481	8798.443843084026	8254.06512203264	8401.348772485331	9288.905844328156	10185.521451377721	0.9219670005072927	0.8423568383766132	1.0923722162905363	1.0250552549318903	0.8448342766961778	0.8638186945150388	0.8103723664453304	0.8248324656317858	0.9119715557686753	1.0	13.314232221027464	-7.773853098316423	24.99568483873186	0.8633255654740419	0.9699987877194609	0.24725243497447813	0.07891784959015759	296.75649577717695	597532.8160278533	0.02525145831030921	0.02882951275125169	1.6832433279471097e-08	7.773853098316423	0.10667322224541897	
TGLYPASTVCPTREDS(ph)PPQAVEDLDGK	ddPTM_K562_Methotrexat_30min_R1	2	TGLYPASTVCPTREDSPPQAVEDLDGK	27	1	B7WNQ9;P15976-3;P15976-2;P15976	B7WNQ9	GATA1	Erythroid transcription factor	1	TGLYPAS(0.003)T(0.003)VCPT(0.001)REDS(0.992)PPQAVEDLDGK;TGLY(0.002)PAS(0.207)T(0.207)VCPT(0.002)REDS(0.582)PPQAVEDLDGK	76.79899999999999	0.00027226	60057000.0	4400.4400000000005	3224.8199999999997	6083.33	3706.67	3246.59	2941.58	2700.7	4547.94	4964.21	6250.37	True	False	4207.00192653808	3757.6666924323104	4806.5221666232455	3381.7119960764344	3673.573490999372	3509.9987034744368	3306.400723090115	4387.98637240307	4733.424960630711	5118.367425676362	0.821942150036669	0.7341533696041287	0.9390732956198612	0.6607012968846334	0.7177236773919042	0.6857652863814503	0.6459873721654897	0.8573019495221612	0.9247919437915728	1.0	12.321468000655024	-9.64664289838543	2.613820040295051	0.9775557416221572	0.7446288838419866	0.5303844968167883	0.08278695451305165	0.2299835734797277	2.919520959022552	0.07542979085790827	0.022969611475872644	2.2560935380576792e-10	9.64664289838543	-0.23292685778017064	
TGQAGS(ph)LSGSPKPFSPQLSAPITTK	ddPTM_K562_Methotrexat_30min_R1	1	TGQAGSLSGSPKPFSPQLSAPITTK	25	1	Q9ULU4-9;Q9ULU4-11;Q9ULU4-23;Q9ULU4;Q9ULU4-21;A0A087WV57;H7C4X9;A0A087WYS3;A0A087WVZ6;Q9ULU4-10;Q9ULU4-13;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-19;Q9ULU4-16;Q9ULU4-22;Q9ULU4-14;Q9ULU4-6;Q9ULU4-3;Q9ULU4-4;Q9ULU4-8;Q9ULU4-17	Q9ULU4-9	ZMYND8	Protein kinase C-binding protein 1	1	T(0.019)GQAGS(0.394)LS(0.26)GS(0.323)PKPFS(0.003)PQLS(0.001)APITTK	64.488	0.0025050000000000003	16099000.0	726.33	477.32	954.43	675.89	435.78	344.43	444.01	615.25	635.01	930.67	True	False	694.401402882985	556.1890169472379	754.1081860576728	616.6357730869225	493.0927083209481	410.986222859042	543.5905450658134	593.6113087729806	605.4885237026853	762.1166446233135	0.9111484544812721	0.7297951315866377	0.9894918204160218	0.8091094420220978	0.6470042503331833	0.5392694487891385	0.7132642344197724	0.778898234228149	0.7944827448322641	1.0	9.573868013924846	-7.530844016971135	20.40788702439031	0.7230134567369525	0.8683085099877551	0.1646750873995192	0.1266070422815809	30.290190512731076	77602.78112944753	0.037221810578490784	0.04824819879867585	2.9454793545669125e-08	7.530844016971135	0.1452950532508026	
TGQAGSLSGS(ph)PKPFSPQLSAPITTK	ddPTM_K562_Methotrexat_30min_R1	1	TGQAGSLSGSPKPFSPQLSAPITTK	25	1	Q9ULU4-9;Q9ULU4-11;Q9ULU4-23;Q9ULU4;Q9ULU4-21;A0A087WV57;H7C4X9;A0A087WYS3;A0A087WVZ6;Q9ULU4-10;Q9ULU4-13;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-19;Q9ULU4-16;Q9ULU4-22;Q9ULU4-14;Q9ULU4-6;Q9ULU4-3;Q9ULU4-4;Q9ULU4-8;Q9ULU4-17	Q9ULU4-9	ZMYND8	Protein kinase C-binding protein 1	1	T(0.027)GQAGS(0.092)LS(0.18)GS(0.698)PKPFS(0.002)PQLS(0.001)APITTK	72.57300000000001	0.0006190000000000001	14453000.0	1242.6	648.26	2082.4	1015.5	751.53	695.15	593.99	1005.8	893.25	1770.5	True	False	1187.9767918472294	755.3739464640418	1645.3326976797662	926.4726916654624	850.369367764565	829.4778991971175	727.2073779050979	970.4254439071333	851.7230024683447	1449.8452935042246	0.8193817624333777	0.5210031372646179	1.13483328535216	0.6390148630452914	0.5865242116345065	0.572114764874188	0.5015758447906283	0.6693303404542215	0.5874578524235233	1.0	10.501683249590672	-5.916280859674159	17.68294856732751	0.6788039611664354	5.069309808962732	0.03367595458701045	0.19933783277168135	9770036.65756038	21262776.52601505	0.04921500611414955	1673203659.8240266	1.2126044015726654e-06	5.916280859674159	4.390505847796296	
TGQPAQPAPSAQQPPRPPAS(ph)PDEPSVAASSVGSSR	ddPTM_K562_Methotrexat_30min_R1	2	TGQPAQPAPSAQQPPRPPASPDEPSVAASSVGSSR	35	1	O94964-2	O94964-2	SOGA1	Protein SOGA1;N-terminal form;C-terminal 80 kDa form	1	T(0.001)GQPAQPAPS(0.072)AQQPPRPPAS(0.92)PDEPS(0.005)VAAS(0.001)S(0.001)VGSSR;TGQPAQPAPS(0.007)AQQPPRPPAS(0.979)PDEPS(0.009)VAAS(0.002)S(0.002)VGS(0.001)S(0.001)R	75.779	2.7589999999999998e-08	116097000.0	2380.9700000000003	1850.0900000000001	2509.11	2126.44	2114.35	1975.76	1508.22	2180.74	2238.7	2257.29	True	False	2276.3054096929786	2155.7859263469263	1982.4821000169395	1940.0183067110845	2392.424085176917	2357.5476575094544	1846.4767277294675	2104.042138144801	2134.6233256377095	1848.4729074126808	1.2314518652475885	1.1662523793028665	1.0724972446536056	1.049524880203162	1.2942705709036373	1.2754028733963587	0.9989200925395183	1.1382596573134751	1.1548036852893642	1.0	10.852118183135683	-11.738004516736607	0.3808486916807197	0.9465177019197254	1.1635408955682889	0.2148776042246323	0.09019640643553078	19.506620382123838	2.40885635998393	1.3270436888228716	0.07029513699978764	1.8280812036878877e-12	11.738004516736607	0.21702319364856348	
TGQPAQPAPSAQQPPRPPASPDEPSVAASS(ph)VGSSR	ddPTM_K562_Methotrexat_30min_R1	1	TGQPAQPAPSAQQPPRPPASPDEPSVAASSVGSSR	35	1	O94964-2	O94964-2	SOGA1	Protein SOGA1;N-terminal form;C-terminal 80 kDa form	1	TGQPAQPAPS(0.015)AQQPPRPPAS(0.058)PDEPS(0.085)VAAS(0.366)S(0.455)VGS(0.014)S(0.006)R	47.605	0.0050683	38727000.0	711.77	786.39	751.7	645.35	661.5	753.55	453.45	702.03	712.62	871.23	True	False	680.4814430493341	916.3275811554895	593.9284425883019	588.7731674705137	748.4988447251075	899.1628726749444	555.1477053672061	677.3392069856081	679.4904517425044	713.44180460869	0.9538009108150958	1.2843760699698257	0.8324833767122197	0.8252574543111407	1.0491379113053876	1.2603170530049317	0.778126122945227	0.9493965767216522	0.9524118818845957	1.0	9.478651943755253														
TGS(ph)ESSQTGTSTTSSR	ddPTM_K562_Methotrexat_30min_R1	4	TGSESSQTGTSTTSSR	16	0	E7EX17;P23588-2;P23588	E7EX17	EIF4B	Eukaryotic translation initiation factor 4B	1	T(0.003)GS(0.981)ES(0.013)S(0.003)QTGTSTTSSR;T(0.003)GS(0.996)ES(0.001)SQTGTSTTSSR;T(0.237)GS(0.762)ES(0.001)S(0.001)QTGTSTTSSR;T(0.461)GS(0.538)ES(0.001)SQTGTSTTSSR	140.77	1.7034999999999999e-06	9999870.0	2541.6800000000003	2508.308	4054.735	3068.66	2684.71	2423.4500000000003	2070.45	2789.7799999999997	3223.77	3455.4900000000002	True	False	2429.9507905217	2922.76326305391	3203.7015347323086	2799.635342202006	3037.7964224065663	2891.7474139527512	2534.8011171629314	2691.6618561376436	3073.897636347471	2829.6672766172915	0.8587408175517265	1.032899976334995	1.1321831231557917	0.9893867612409941	1.0735525153466388	1.021939023661352	0.895794759372962	0.9512290997531605	1.0863106280191863	1.0	11.466416709947394	-8.567087668428275	24.99964046635026	0.9763547141609843	1.0255128595821947	0.03680986271399278	0.07913882580499156	383.5555899174391	216893.11407759492	0.03064851346251964	0.02374024308026384	2.7096445969388957e-09	8.567087668428275	0.04915814542121044	
TGSGS(ph)PFAGNSPAR	ddPTM_K562_Methotrexat_30min_R1	2	TGSGSPFAGNSPAR	14	0	Q9UPT8;M0QY97	Q9UPT8	ZC3H4	Zinc finger CCCH domain-containing protein 4	1	T(0.024)GS(0.01)GS(0.514)PFAGNS(0.452)PAR;T(0.114)GS(0.046)GS(0.81)PFAGNS(0.03)PAR	157.37	5.1169e-08	53292000.0	1892.0	2006.7	2346.0	2386.96	1954.94	1962.23	2120.16	2184.2	2431.2	2559.8	True	False	1808.829945416832	2338.273066932083	1853.6066599869048	2177.6989227944773	2212.0488760497374	2341.4031764965257	2595.659850063589	2107.3804479836544	2318.174042654397	2096.1954150308457	0.8629109349474534	1.1154842960562794	0.8842718797567969	1.038881636310817	1.0552684450066823	1.1169775297223765	1.2382718860328172	1.0053358732075293	1.1058959608593004	1.0	11.033557501134062	-7.688158030269306	2.3261547130274876	1.1000220519284554	0.969772954270443	0.29322689708728855	0.08971114869350566	0.37621632774035096	4.161177058415617	0.028432937261068277	0.03810400870935108	2.0504159415202416e-08	7.688158030269306	-0.1302490976580124	
TGSGSPFAGNS(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	3	TGSGSPFAGNSPAR	14	0	Q9UPT8;M0QY97	Q9UPT8	ZC3H4	Zinc finger CCCH domain-containing protein 4	1	TGS(0.001)GS(0.141)PFAGNS(0.858)PAR;TGSGSPFAGNS(1)PAR;TGSGSPFAGNS(1)PAR	142.54	5.415199999999999e-06	40786000.0	3339.5	3026.1400000000003	4064.2999999999997	3296.4399999999996	3201.54	2824.88	2688.59	3640.9	3618.19	3718.5	True	False	3192.6995786043954	3526.158199414888	3211.258971945769	3007.4462232532733	3622.598626366166	3370.748080103505	3291.5747473221213	3512.8474833182327	3449.9811366369336	3045.0436169982836	1.048490590013836	1.1579992416958786	1.0545855415730747	0.9876529211157662	1.1896705210210485	1.1069621667443605	1.0809614446727895	1.1536279689750706	1.1329825022466593	1.0	11.572247178007634														
TGSS(ph)PNSVSSSPTNSAITQLR	ddPTM_K562_Methotrexat_30min_R1	2	TGSSPNSVSSSPTNSAITQLR	21	0	A0A1B0GWI0;A0A1B0GVV8;A0JP08;A0A1B0GV02;O60315-2;O60315;U3KQ51;E7ESP8;A0A1X7SC99;E7EUW9;A0A1B0GW50	A0A1B0GWI0	ZEB2	Zinc finger E-box-binding homeobox 2	1	T(0.025)GS(0.118)S(0.857)PNSVSSSPTNSAITQLR;T(0.015)GS(0.111)S(0.85)PNS(0.023)VSSSPTNSAITQLR	173.09	1.8738e-17	70356000.0	2629.1	2299.3999999999996	3222.7	2826.8	2371.4	2164.81	2040.8200000000002	2492.4	2504.4	3264.3999999999996	True	False	2513.5279119954525	2679.3367668827577	2546.299310801277	2578.9788328901345	2683.2806657310934	2583.1288944269745	2498.525835411846	2404.7408792942315	2387.970990631652	2673.1855273172505	0.9402743978334991	1.0023010896560107	0.9525337036208954	0.9647586396587821	1.0037764451104052	0.9663111175898611	0.9346623382026578	0.8995787440565624	0.8933053715236019	1.0	11.384344253201604	-8.801312584338561	3.6245082669436934	0.9217076490726723	0.9737856778839119	0.24626203680038272	0.03291466777142377	0.25727067978922497	7.008048214450269	0.013750420824420862	0.009311753253599845	1.5801103422500914e-09	8.801312584338561	0.052078028811239574	
TGTITTFEHAHNMR	ddPTM_K562_Methotrexat_30min_R1	1	TGTITTFEHAHNMR	14	0	P13639	P13639	EEF2	Elongation factor 2	0		64.53399999999999	0.029015	14533000.0	4903.4	4165.4	5694.4	5325.9	4362.1	4389.8	4113.8	4717.7	5022.4	5548.3	False	True	4687.85240716538	4853.6615503059265	4499.223258580319	4858.9866159931935	4935.792608579577	5238.0667221398335	5036.424369477583	4551.775816982185	4788.909720231754	4543.449105873758	1.0317827487282598	1.0682768613015006	0.9902660189950707	1.0694488928491594	1.0863536695499898	1.1528833271991703	1.108502428907261	1.0018326850184505	1.054025170886291	1.0	12.149572203042274	-3.0175259431164907	19.962347367204984	1.0602133129525904	0.005302309987624598	0.0	0.049524095188324735	0.0	0.0	0.01201617493969203	0.0	0.0009604484431007888	3.0175259431164907	-1.0549110029649658	
TGTIVVEGHELHDEDIR	ddPTM_K562_Methotrexat_30min_R1	2	TGTIVVEGHELHDEDIR	17	0	J3KR24;A0A0A0MSX9;P41252	J3KR24	IARS	Isoleucine--tRNA ligase, cytoplasmic	0	;	101.04	0.00091538	16159300.0	4400.7	3593.4	4854.7	4492.9	4404.3	3934.1000000000004	3562.6	4942.1	5018.700000000001	6009.9	False	True	4207.250497249398	4187.148272643519	3835.7648134008646	4099.014432677261	4983.542648258187	4694.30914656028	4361.603738320006	4768.283541791056	4785.381732424163	4921.448872878304	0.8548804642541764	0.850795849108287	0.7793974726709945	0.8328877406949381	1.01261697052713	0.9538469803943769	0.8862438381421459	0.9688780001492387	0.9723522190377724	1.0	12.264867391689426	-7.744727614768933	24.742324636552397	0.9595391320035138	0.8274340671292939	0.7630049836039636	0.037076496284205035	110.6471073779261	163815.95376012055	0.011436309373478303	0.014721283426144052	1.799999503171214e-08	7.744727614768933	-0.1321050648742199	
TGTLQDLIQHGS(ph)PINNECHPSLER	ddPTM_K562_Methotrexat_30min_R1	2	TGTLQDLIQHGSPINNECHPSLER	24	0	A0A2R8YH03;Q5VWN6	A0A2R8YH03	FAM208B	Protein FAM208B	1	TGTLQDLIQHGS(1)PINNECHPSLER;TGTLQDLIQHGS(1)PINNECHPSLER	103.84	3.8734e-07	79210000.0	3940.1	3170.0	4850.2	4086.0	3342.0	3033.0	3173.9	3855.9	3678.6	4575.0	True	False	3766.897921742529	3693.7886192129877	3832.2093019047234	3727.786723924256	3781.5315783390893	3619.0843246275717	3885.7278687065277	3720.2858114550736	3507.582688922534	3746.4231673435925	1.0054651472843241	0.9859507199855575	1.0228981433034319	0.9950255370023908	1.0093711813714814	0.9660105553942774	1.0371833866972666	0.9930233839795914	0.9362483980712706	1.0	11.871298149258523	-9.540249428117932	24.809526402156724	0.9669613969352863	1.0026848913148996	0.2620582895037715	0.023172614749010247	274.25743988735337	391697.12962240545	0.01444366832846598	0.005462256042962192	2.882375594417234e-10	9.540249428117932	0.03572349437961331	
TGVTSTS(ph)DS(ph)EEEGDDQEGEKKR	ddPTM_K562_Methotrexat_30min_R1	2	TGVTSTSDSEEEGDDQEGEKKR	22	2	O75475-3;O75475-2;O75475	O75475-3	PSIP1	PC4 and SFRS1-interacting protein	2	T(0.003)GVT(0.013)S(0.051)T(0.172)S(0.779)DS(0.983)EEEGDDQEGEKKR;T(0.002)GVT(0.021)S(0.09)T(0.417)S(0.492)DS(0.979)EEEGDDQEGEKKR	72.317	0.0072054	35604000.0	9609.7	5086.799999999999	18770.7	10110.5	5338.4	4721.2	4650.4	6627.799999999999	7523.5	13064.0	True	False	9187.269094329882	5927.307239183792	14830.986586792915	9224.128162563924	6040.493171096769	5633.505081909558	5693.370578982589	6394.696517327196	7173.734127143126	10697.983007251732	0.8587851642783693	0.5540583898073038	1.3863348424408213	0.862230586486374	0.5646385086798289	0.5265950673216466	0.5321910284511839	0.5977478663961691	0.6705688466957126	1.0	13.38505119676145	-7.678430336015119	5.575872126337018	0.6171206321229303	0.9295677397489419	0.24165847446680755	0.22894034854684636	0.27075773437721146	13.808972531128772	0.06805634131616838	0.08778203107373954	2.096861105046775e-08	7.678430336015119	0.3124471076260116	
TGYGGGFNERENVEY(ph)IEREESDGEYDEFGR	ddPTM_K562_Methotrexat_30min_R1	1	TGYGGGFNERENVEYIEREESDGEYDEFGR	30	2	O95218-2;O95218	O95218-2	ZRANB2	Zinc finger Ran-binding domain-containing protein 2	1	TGYGGGFNERENVEY(0.922)IEREES(0.077)DGEYDEFGR	71.794	3.6342e-05	93127000.0	1133.1	879.52	1126.9	1366.8	708.35	975.26	821.23	978.63	1072.5	1470.9	True	False	1083.2902807356313	1024.8457307161536	890.3790899996775	1246.9747660938988	801.5104409085865	1163.7151923627712	1005.411732448363	944.2110282072351	1022.6397090929757	1204.5057566875817	0.8993649675155595	0.8508433646133023	0.739207002586887	1.0352584528305684	0.6654268246195506	0.9661350191990901	0.8347089475215695	0.7838991411745819	0.8490118900761905	1.0	10.234225573319234	-11.781430592776259	4.693741412774029	1.0000000515193312	0.8455013918828631	0.1720644818631032	0.10056789765300285	10357007.381718647	4332731.770925418	29.408541088558785	0.02239873918396974	1.6541291200117734e-12	11.781430592776259	-0.15449865963646814	
TGYGGGFNERENVEYIEREES(ph)DGEYDEFGR	ddPTM_K562_Methotrexat_30min_R1	1	TGYGGGFNERENVEYIEREESDGEYDEFGR	30	2	O95218-2;O95218	O95218-2	ZRANB2	Zinc finger Ran-binding domain-containing protein 2	1	T(0.001)GY(0.001)GGGFNERENVEY(0.19)IEREES(0.789)DGEY(0.02)DEFGR	56.211000000000006	0.0012970999999999998	98090000.0	562.59	572.56	764.64	947.9	518.13	474.58	586.94	601.81	709.89	878.58	True	False	537.8592172262456	667.1658081440343	604.1525134238647	864.799078709692	586.2731767459103	566.2858683751249	718.5762359427233	580.644001190845	676.8873688466317	719.460648385734	0.7475867073940033	0.9273138282697816	0.8397297541976922	1.2020102567806263	0.8148787262532584	0.7870977650351135	0.9987707285381139	0.807054565796817	0.9408261179612469	1.0	9.490771969261028	-13.532099176106792	0.01059407497097415	1.9330190253642474	7.882881890325675e-07	0.056784537562801884	0.12604810029335167	33565.32257779086	43.016669507334505	4333.5943143815375	3547.5449146617884	2.9369788826924503e-14	13.532099176106792	-1.9330182370760585	
THDHQLESSLS(ph)PVEVFAK	ddPTM_K562_Methotrexat_30min_R1	1	THDHQLESSLSPVEVFAK	18	0	Q5JW53;Q9H410-4;Q9H410	Q5JW53	DSN1	Kinetochore-associated protein DSN1 homolog	1	THDHQLESS(0.001)LS(0.999)PVEVFAK	147.02	3.8046e-12	19961000.0	6447.5	4434.2	8978.3	6799.5	4315.8	4023.9	3946.5	5242.4	5770.8	7854.5	True	False	6164.075620018513	5166.87618148714	7093.877525729079	6203.398391904792	4883.40334703646	4801.461725640911	4831.603085746342	5058.021820579392	5502.5167675839075	6431.9739383388505	0.9583489732874251	0.8033111189535633	1.102908313021115	0.9644626130912012	0.7592386713397767	0.7464989397766368	0.7511851154972454	0.786387175860619	0.8554942573360319	1.0	12.651045845546859	-7.7542733900955785	24.94188304884725	0.7990241823700985	0.9566652135237991	0.3242439561789524	0.09764137306077783	173.49459016984764	603860.4640857491	0.028684674986335302	0.03624597333108366	1.7608672245558548e-08	7.7542733900955785	0.15764103115370054	
THGS(ph)S(ph)VPKESLS(ph)RQDS(ph)SESRNGR	ddPTM_K562_Methotrexat_30min_R1	1	THGSSVPKESLSRQDSSESRNGR	23	3	Q9P209	Q9P209	CEP72	Centrosomal protein of 72 kDa	4	T(0.119)HGS(0.893)S(0.965)VPKES(0.048)LS(0.503)RQDS(0.491)S(0.491)ES(0.49)RNGR	45.369	0.030226999999999997	55169000.0	0.0	164.37	0.0	0.0	141.46	0.0	0.0	0.0	0.0	0.0	True	False	0.0	191.5293486877094	0.0	0.0	160.0644695008521	0.0	0.0	0.0	0.0	0.0											0.0														
THLMSESEWR	ddPTM_K562_Methotrexat_30min_R1	1	THLMSESEWR	10	0	Q9BZU3;Q5T179;P61024	Q9BZU3	CKS1B	Cyclin-dependent kinases regulatory subunit;Cyclin-dependent kinases regulatory subunit 1	0		99.973	0.009909999999999999	4927900.0	459.88	374.57	714.56	551.11	408.03	422.76	511.52	566.9	559.4	536.31	False	True	439.6642258447639	436.46132589861475	564.5836210401717	502.79504195347397	461.693096920915	504.4523867720254	626.2413810771487	546.9618056780213	533.393616099404	439.17906204984484	1.0011047061138447	0.9938117811478872	1.285543118574478	1.1448520328057192	1.0512639076325432	1.148625766486956	1.4259363325614853	1.2454186753009266	1.2145242389512325	1.0	8.778665464980978	-8.536366249368825	24.977053501449614	1.2484013394364906	1.1026911401892476	0.1725534914726402	0.12426186823324158	354.12575787967774	655787.4933782073	0.047421281621959264	0.03675135728319333	2.9082634858701387e-09	8.536366249368825	-0.14571019924724293	
THNDIIHNENMR	ddPTM_K562_Methotrexat_30min_R1	1	THNDIIHNENMR	12	0	E7EQR4;P15311	E7EQR4	EZR	Ezrin	0		62.528	0.033666	5614000.0	1122.8	745.33	1574.7	1443.6	1201.5	961.63	874.55	1018.3	1073.9	1342.9	False	True	1073.4430564027589	868.4831140561566	1244.191989548754	1317.041829333591	1359.5183098068276	1147.451387765121	1070.6900997439404	982.4858118220658	1023.9746233985516	1099.6877970329413	0.9761343713179386	0.7897542524336488	1.131404743151373	1.1976506722063216	1.236276617304414	1.0434337735319517	0.9736309729295539	0.8934224917953103	0.9311503011685036	1.0	10.102878283318544	-8.816332861772691	3.541399752426387	0.9350497286979719	1.0681833565808645	0.18054946290411378	0.1189360889906734	0.44423840352258753	11.303429852604992	0.06007444590564202	0.040236788672306734	1.526395715161863e-09	8.816332861772691	0.13313362788289262	
THRMT(ph)GMPQMGRMRSPR	ddPTM_K562_Methotrexat_30min_R1	1	THRMTGMPQMGRMRSPR	17	3	A0A0A0MTP6	A0A0A0MTP6	INPPL1		1	T(0.093)HRMT(0.897)GMPQMGRMRS(0.009)PR	41.68899999999999	0.033846	0.0	1482.5	1401.3	1485.2	1384.3	1586.2	1319.5	1321.7	1505.9	1432.4	1628.5	True	False	1417.3310750953774	1632.841006972605	1173.4768164588875	1262.9405682644024	1794.8131028011558	1574.4747004108417	1618.1248697405142	1452.9366434477552	1365.8080366478123	1333.5628695123587	1.0628153403923506	1.2244199687185973	0.8799561260190083	0.9470423908294773	1.345878131308096	1.1806527734133576	1.2133847655283105	1.0895149202669745	1.0241797127624321	1.0	10.38107012559566	-5.955671309252207	17.341999158103697	1.1076103242915802	0.7998121618253129	0.004529628588708978	0.13543118563512893	7029.218432600723	83015.15669385856	0.03431042156093246	76050.49612878164	1.107461636388974e-06	5.955671309252207	-0.30779816246626734	
THS(ph)FENVSCHLPDSR	ddPTM_K562_Methotrexat_30min_R1	1	THSFENVSCHLPDSR	15	0	Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7	Q5VZ89-5	DENND4C	DENN domain-containing protein 4C	1	T(0.001)HS(0.999)FENVSCHLPDSR	136.66	9.6465e-06	30396000.0	927.93	635.2	1309.4	1204.5	761.28	854.81	657.91	842.91	843.49	970.07	True	False	887.1393082720099	740.1560034460853	1034.5748340097405	1098.9033551068924	861.401663661874	1019.989934564753	805.4630650306283	813.2643775340641	804.2763340073041	794.3809228295072	1.116768143313546	0.9317393987883318	1.3023661624761658	1.383345600990399	1.084368517554079	1.2840060797679387	1.0139506650809886	1.0237712842313684	1.0124567583301853	1.0	9.633687166531066	-8.786578886050089	24.12221754465764	1.0145254188002324	1.1822545904819537	0.3310022563738838	0.11922536175862695	207.74301291329277	199333.5748602306	0.053414401294397895	0.03603168517294145	1.634636205828771e-09	8.786578886050089	0.1677291716817213	
THTTALAGRS(ph)PS(ph)PASGR	ddPTM_K562_Methotrexat_30min_R1	3	THTTALAGRSPSPASGR	17	1	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	THTT(0.001)ALAGRS(0.999)PS(0.848)PAS(0.152)GR;THT(0.002)T(0.007)ALAGRS(0.823)PS(0.968)PAS(0.2)GR;THTTALAGRS(0.859)PS(0.821)PAS(0.32)GR	117.13	0.011845999999999999	159781000.0	11299.53	9901.039999999999	14363.68	13404.440000000002	10292.67	10245.21	10391.59	11132.89	11870.41	13871.739999999998	True	False	10802.816190875195	11537.018571095447	11348.93985930123	12229.293556935685	11646.336514190125	12224.951834328265	12722.168582240158	10741.33994851788	11318.557230036682	11359.433466091095	0.9509995567228373	1.015633271283683	0.9990762209382018	1.0765760100132808	1.0252568095896208	1.0761937970604625	1.1199650598964241	0.9455876457731559	0.9964015603263637	1.0	13.471603264036217	-6.058578587979771	1.2964764067805488	1.0354588091469856	0.8827965853864648	0.19887261510029886	0.047436356329700786	3.6347163128073867	3.8284534299109145	0.014664695478147029	0.830195903926707	8.738188559458263e-07	6.058578587979771	-0.15266222376052085	
THTTALAGRS(ph)PS(ph)PASGRR	ddPTM_K562_Methotrexat_30min_R1	1	THTTALAGRSPSPASGRR	18	2	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	2	THTTALAGRS(0.997)PS(0.709)PAS(0.294)GRR	65.954	0.033252	149240000.0	2344.4	1585.2	2714.3	2067.1	1663.0	1543.4	1694.5	1557.4	1930.1	2563.4	True	False	2241.342983105297	1847.1273562070749	2144.6055231042	1885.8805523797898	1881.7136489461118	1841.6402066040855	2074.534759609064	1502.625359257276	1840.3700722800475	2099.1434201461334	1.0677417091154564	0.8799433799899608	1.0216574544272452	0.8984048132587829	0.8964197638363914	0.8773293853718096	0.9882768083872249	0.7158278680894846	0.8767243126969994	1.0	11.035585024167334	-3.000000035578658	0.44893541874012705	0.8769806508556935	4.521248899037504	0.22729179599343785	0.08393801061323387	125.0830941938703	1.5138125724436293	0.0512403517503631	417.45961194602694	0.0009999999180771162	3.000000035578658	3.6442682481818105	
THTTALAGRS(ph)PSPASGR	ddPTM_K562_Methotrexat_30min_R1	1	THTTALAGRSPSPASGR	17	1	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	THTTALAGRS(0.497)PS(0.497)PAS(0.006)GR	71.89399999999999	0.021422999999999998	5390500.0	915.16	1208.4	1770.0	1357.9	968.15	978.62	787.47	1152.5	1198.3	1507.5	True	False	874.9306621816431	1408.0675607119792	1398.5011884811686	1238.855015275758	1095.4786946645688	1167.7244648094406	964.080193065418	1111.9659217567814	1142.5912945511532	1234.477142026331	0.7087459397956039	1.14061857670423	1.1328692455055105	1.0035463380409304	0.887402980071706	0.945926356232632	0.7809623687992552	0.900758615855411	0.92556699160557	1.0	10.269684407987203	-7.7272331062377315	6.164901708503459	0.8973591296210515	1.0175455903255912	0.10139447292187465	0.12299091419162875	0.33025174496206156	35.02783171619622	0.036694288955871505	0.04653475399141488	1.8739883805296362e-08	7.7272331062377315	0.12018646070453975	
TIAHS(ph)PTSFTESSSK	ddPTM_K562_Methotrexat_30min_R1	3	TIAHSPTSFTESSSK	15	0	Q03164-2;Q03164;Q03164-3	Q03164-2	KMT2A	Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180	1	TIAHS(0.632)PT(0.366)S(0.002)FTESSSK;TIAHS(0.974)PT(0.024)S(0.002)FTESSSK;T(0.219)IAHS(0.646)PT(0.12)S(0.015)FTESSSK	241.41	6.618899999999999e-61	107885000.0	9161.5	5998.9	12757.2	9141.599999999999	7238.999999999999	5928.9	6215.6	7801.900000000001	8078.5	10216.7	True	False	8758.77142967036	6990.116261134635	10079.63805745308	8340.170121249623	8191.0553846788325	7074.576014600863	7609.60652217533	7527.502754840981	7702.932298282141	8366.35662815285	1.0469039056017564	0.8355030238147922	1.204782261317313	0.9968700226314632	0.979046883695571	0.8455981891561812	0.909548428352785	0.89973486541452	0.9207033169446447	1.0	13.03038378093493	-8.015312803806603	4.06409201213376	0.9081891737910506	1.0189774209960762	0.23105853066995774	0.09068612511334173	0.3163686439185789	12.004225030296862	0.0296180949336033	0.031604348037323426	9.653553242320148e-09	8.015312803806603	0.11078824720502567	
TIDLGAAAHYT(ph)GDKASPDQNASTHTPQSSVK	ddPTM_K562_Methotrexat_30min_R1	2	TIDLGAAAHYTGDKASPDQNASTHTPQSSVK	31	1	Q14677-2;Q14677;Q14677-3	Q14677-2	CLINT1	Clathrin interactor 1	1	T(0.001)IDLGAAAHY(0.391)T(0.444)GDKAS(0.101)PDQNAS(0.03)T(0.03)HT(0.002)PQSSVK;TIDLGAAAHY(0.142)T(0.593)GDKAS(0.166)PDQNAS(0.049)T(0.049)HT(0.001)PQSSVK	69.016	5.134e-05	70101000.0	3860.4	2241.8	5670.1	3985.9	2314.5	2153.79	1719.8400000000001	2470.9	2875.5	4650.7	True	False	3690.701438312442	2612.2193459153555	4480.023496501169	3636.4623355089793	2618.8973183919265	2569.979435390575	2105.557899655388	2383.997046480548	2741.8186326310974	3808.413163795591	0.9690916609042928	0.6859075508792567	1.1763491259536107	0.9548497442658664	0.6876610298715191	0.67481634078516	0.5528701349086083	0.6259817262328169	0.7199372848240315	1.0	11.894974285635906	-7.763817744300973	22.675190925049257	0.6818732670691938	0.9443465820459312	0.34637142818480005	0.15615409460864776	19.76326420961823	188424.77014488055	0.04673062233268641	0.05561180847881115	1.7225913247142847e-08	7.763817744300973	0.2624733149767374	
TIET(ph)SPSLSR	ddPTM_K562_Methotrexat_30min_R1	2	TIETSPSLSR	10	0	H3BP78;F8W7R3;Q9NVI1-2;Q9NVI1-1;Q9NVI1	H3BP78	FANCI	Fanconi anemia group I protein	1	T(0.006)IET(0.495)S(0.495)PS(0.004)LSR;T(0.002)IET(0.494)S(0.494)PS(0.011)LSR	115.0	0.0073378	214689000.0	7901.2	7600.0	9631.6	8916.9	7647.7	7035.8	6403.8	7627.9	8384.6	9083.7	True	False	7553.872708629744	8855.770822087923	7610.058783601817	8135.169221380368	8653.506598343463	8395.368773892082	7840.015162929786	7359.622433465124	7994.801776094136	7438.55390714732	1.015502852156737	1.190523175960165	1.0230562120803757	1.0936492929847166	1.1633318392743996	1.1286291500590468	1.0539703362768833	0.9893888684995137	1.074779033114534	1.0	12.860806465973223	-8.948683834837137	5.198949388759973	1.0233955622309365	1.1048274038691448	0.3064344798025538	0.05522774247425824	0.23204803643684688	13.63482405924814	0.023239641528545806	0.015237948851631117	1.1254239813102338e-09	8.948683834837137	0.08143184163820827	
TIETS(ph)PSLSR	ddPTM_K562_Methotrexat_30min_R1	1	TIETSPSLSR	10	0	H3BP78;F8W7R3;Q9NVI1-2;Q9NVI1-1;Q9NVI1	H3BP78	FANCI	Fanconi anemia group I protein	1	TIET(0.223)S(0.771)PS(0.006)LSR	160.91	2.7877e-06	180090000.0	5590.6	5199.3	6303.9	5763.0	4945.5	4893.8	4990.4	5518.5	5440.5	6075.6	True	False	5344.843917995429	6058.395952010756	4980.797537890639	5257.766737634722	5595.919934373421	5839.457589140261	6109.624233905622	5324.411227084425	5187.57234248982	4975.249966232287	1.074286509074243	1.2177068475212163	1.0011150337562946	1.0567844376302529	1.1247515144673548	1.1737013474244453	1.228003472262196	1.0701796418716536	1.0426757203554784	1.0	12.28055329594336	-9.654111053504682	3.2293098937021285	1.0168741191756379	1.1242819025105855	0.27410425858568344	0.06749339466767507	0.35577656329839563	6.901474345206896	0.05990201424055832	0.018683163877690503	2.217629276988568e-10	9.654111053504682	0.1074077833349476	
TIGGGDDS(ph)FNTFFSETGAGK	ddPTM_K562_Methotrexat_30min_R1	2	TIGGGDDSFNTFFSETGAGK	20	0	P68363;Q71U36;Q9BQE3;Q71U36-2;F5H5D3;F8VVB9;F8VQQ4;F8VRZ4;P0DPH8;P0DPH7;P68363-2;F8VS66;A0A1W2PQM2;P0DPH7-2;F8VWV9;F8VX09;Q6PEY2;F8VRK0;F8W0F6;F8VXZ7	P68363	TUBA1B;TUBA1A;TUBA1C;TUBA3E	Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-3E chain	1	T(0.001)IGGGDDS(0.716)FNT(0.17)FFS(0.112)ETGAGK;T(0.001)IGGGDDS(0.617)FNT(0.349)FFS(0.032)ETGAGK	231.93	6.125299999999999e-57	27087300.0	4921.6	3239.2	6687.200000000001	4377.1	3505.2	3024.3999999999996	3014.7	4928.8	5036.5	6114.4	True	False	4705.252356957448	3774.4227430141045	5283.648105995069	3993.3664388861625	3966.1952388971195	3608.8224963414505	3690.823216166094	4755.451310329566	4802.354214309343	5007.022910252598	0.9397305427388335	0.7538257385013023	1.055247439586514	0.7975530590661312	0.7921264411983746	0.7207521437443133	0.7371292846710574	0.9497562514827117	0.959123674963786	1.0	12.28973734132845	-9.41076076166026	6.746839748566543	0.9714085007743365	0.8274563239127511	0.3145678595389211	0.09623669520808042	0.3183216386262771	16.718619390578933	0.055604244606172304	0.026265327314268744	3.883642439802573e-10	9.41076076166026	-0.14395217686158535	
TIGGGDDSFNT(ph)FFSETGAGK	ddPTM_K562_Methotrexat_30min_R1	1	TIGGGDDSFNTFFSETGAGK	20	0	P68363;Q71U36;Q9BQE3;Q71U36-2;F5H5D3;F8VVB9;F8VQQ4;F8VRZ4;P0DPH8;P0DPH7;P68363-2;F8VS66;A0A1W2PQM2;P0DPH7-2;F8VWV9;F8VX09;Q6PEY2;F8VRK0;F8W0F6;F8VXZ7	P68363	TUBA1B;TUBA1A;TUBA1C;TUBA3E	Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-3E chain	1	TIGGGDDS(0.049)FNT(0.951)FFSETGAGK	217.65	3.0495999999999997e-35	38556000.0	3495.8	2084.1	4100.6	3041.9	2396.4	2305.8	2039.5	2977.2	3475.3	4439.1	True	False	3342.128817752731	2428.4621013570327	3239.9400980146197	2775.2213498544274	2711.568603929322	2751.3632165269555	2496.90979181038	2872.490188506975	3313.7340615485496	3635.1359742415157	0.919395819423255	0.6680526171689465	0.8912844308913768	0.7634436151823695	0.7459331984122274	0.756880412733677	0.6868820890066896	0.7902015794901126	0.911584624352318	1.0	11.827793614610249	-9.897950738460844	2.8353674845480286	0.9971920761887404	0.7716342583239526	0.49662187506582134	0.0743015923687535	0.1851099304665585	3.00184571949219	0.06719883006456924	0.018251690577137943	1.2648798132421994e-10	9.897950738460844	-0.2255578178647878	
TIGVDFLER	ddPTM_K562_Methotrexat_30min_R1	3	TIGVDFLER	9	0	Q9ULC3	Q9ULC3	RAB23	Ras-related protein Rab-23	0	;;	104.01	0.0098317	50354000.0	7557.4	8275.7	8979.0	8897.2	8605.099999999999	8532.599999999999	8570.7	6397.7	6428.299999999999	6425.1	False	True	7225.185744975248	9643.118762151707	7094.430605295147	8117.196289794141	9736.821479582797	10181.404190015566	10492.897647790745	6172.6892647491195	6129.44973609545	5261.452129508044	1.3732303491756404	1.8327865624909445	1.3483788183697663	1.5427672988356382	1.8505958507111246	1.9350939511384564	1.9942968955172935	1.1731911861614293	1.164973012244923	1.0	12.361245314391141	-9.36521354789001	6.685116809702134	1.114023166649281	1.6969345461171699	0.612617767028407	0.2131301169171974	0.1858807398964168	10.304218871521972	0.12677647290133814	0.06000951152497223	4.313069457962393e-10	9.36521354789001	0.5829113794678888	
TILETS(ph)FHQHR	ddPTM_K562_Methotrexat_30min_R1	2	TILETSFHQHR	11	0	Q5M775-4;Q5M775;Q5M775-5;Q5M775-3;Q5M775-2	Q5M775-4	SPECC1	Cytospin-B	1	TILET(0.258)S(0.741)FHQHR;TILET(0.096)S(0.904)FHQHR	111.12	0.0017005	13248000.0	4595.4	4359.200000000001	4071.2	4592.299999999999	4231.299999999999	3819.2	3809.0	4096.5	4660.299999999999	4895.7	True	False	4393.391718376591	5079.483706269165	3216.7107562398483	4189.7001890057145	4787.790115926448	4557.2063477143465	4663.2652105936395	3952.423773081695	4443.6436701967295	4009.0412896970515	1.0958709080066829	1.2670070820480381	0.8023640875205162	1.0450628682156364	1.1942481431235756	1.1367322056338107	1.1631871247068213	0.9858775421543151	1.1084055635986028	1.0	11.969041560752522	-10.264948275675764	1.0592675318192626	1.0024131711546318	1.0925305151722249	0.044634485999096585	0.12081535074746448	3.6675477516129042	7.778341794525057	0.11918972731531416	0.03813309265735316	5.433150362741677e-11	10.264948275675764	0.09011734401759308	
TIMQVSS(ph)GSRGSSGEAT(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	TIMQVSSGSRGSSGEATR	18	1	K7EJ87	K7EJ87	POLR2E		2	T(0.153)IMQVS(0.38)S(0.459)GS(0.007)RGSS(0.102)GEAT(0.898)R;T(0.176)IMQVS(0.371)S(0.45)GS(0.003)RGSS(0.037)GEAT(0.963)R	88.62700000000001	0.0082333	83857000.0	184.531	64.348	362.92	334.46000000000004	299.303	287.68399999999997	157.51	264.16	198.99	270.67	True	False	176.41923819118057	74.98041327101492	286.748051595246	305.13841108264955	338.66659066176663	343.2748614725217	192.835627020374	254.86934307268658	189.73899833325046	221.64904015407413	0.7959395541191917	0.3382844032119158	1.2937031055759134	1.3766737310052855	1.527940704937637	1.5487315498136254	0.8700043405842355	1.1498779462140696	0.85603347617187	1.0	7.792133304734678	-6.770133375606512	24.99788552934414	1.2265044555189333	0.5671119516060198	0.4977645931137463	0.2545588395580161	134.87872143510293	387820.83319953794	0.07030081609478904	0.15002328015741787	1.6977221871670342e-07	6.770133375606512	-0.6593925039129135	
TIPSWATLSAS(ph)QLAR	ddPTM_K562_Methotrexat_30min_R1	1	TIPSWATLSASQLAR	15	0	B0QZK4;Q5SWC8;Q5SSJ5-2;Q5SSJ5	B0QZK4	HP1BP3	Heterochromatin protein 1-binding protein 3	1	TIPSWATLS(0.004)AS(0.996)QLAR	153.48	7.8294e-30	0.0	980.14	736.66	872.35	1229.5	641.47	565.43	743.28	922.97	915.63	1087.6	True	False	937.054219186498	858.3805439209586	689.2556563681057	1121.7116439218964	725.8345486406872	674.6913450953408	909.9794606799799	890.5086219556237	873.0625611531943	890.6251009405225	1.0521309338766054	0.96379558920413	0.7739010001405018	1.2594655627124598	0.8149720324232808	0.7575480910911333	1.021731208472587	0.9998692165931817	0.9802806593158202	1.0	9.798674462337154														
TIQAPTQVPVVVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	TIQAPTQVPVVVSPR	15	0	A0A0U1RRL5;P32519-2;P32519	A0A0U1RRL5	ELF1	ETS-related transcription factor Elf-1	1	TIQAPTQVPVVVS(1)PR;TIQAPTQVPVVVS(1)PR	216.26	6.1284e-27	63052000.0	5740.799999999999	4574.9	5840.1	6062.3	4722.4	4209.9	4675.3	5850.9	5701.9	6496.5	True	False	5488.4413058398295	5330.824464996053	4614.342819688626	5530.827571327951	5343.478373892433	5023.403593224401	5723.855037828423	5645.120530678312	5436.8199135452105	5319.920897627897	1.031677239465548	1.0020495732132066	0.8673705696913875	1.0396447010695395	1.0044281628839709	0.9442628358373317	1.0759285989347391	1.0611286594872902	1.021973825958472	1.0	12.37718907898848	-8.764521786785249	24.999998750088842	1.0448518253464776	0.9809905570652518	0.2426773616957285	0.05002647163535071	113.15219433767004	917708.1071136586	0.020600744464531275	0.014547976851755805	1.7198010636596544e-09	8.764521786785249	-0.06386126828122574	
TIQEVLEEQS(ph)EDEDREAK	ddPTM_K562_Methotrexat_30min_R1	4	TIQEVLEEQSEDEDREAK	18	1	P18858-3;P18858;M0R0Q7;P18858-2	P18858-3	LIG1	DNA ligase 1;DNA ligase	1	TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK	129.43	8.3175e-07	195914000.0	4411.89	2884.08	6072.4	5026.8	3420.11	2728.3500000000004	3099.38	3740.7999999999997	3888.0899999999997	4930.1	True	False	4217.948598247923	3360.6251990220194	4797.886224255958	4586.108248610482	3869.914412445632	3255.5650237710643	3794.494861751044	3609.2339436943757	3707.333544547606	4037.2111163542386	1.0447679045471612	0.8324125496951462	1.1884159846930766	1.1359594820376695	0.9585613189186692	0.8063895917117577	0.93988021740553	0.8939918769850353	0.9182907303335365	1.0	11.979143315759336	-7.991603289122176	23.926784904862593	0.9041377885881905	1.0450011209147612	0.31069207394212606	0.09713919995857714	144.83090276794795	412695.89716016926	0.03117441241267235	0.035280127327196514	1.0195222561981822e-08	7.991603289122176	0.14086333232657067	
TIQNSSVSPTSS(ph)SSSSSSTGETQTQSSSR	ddPTM_K562_Methotrexat_30min_R1	1	TIQNSSVSPTSSSSSSSSTGETQTQSSSR	29	0	Q7Z417	Q7Z417	NUFIP2	Nuclear fragile X mental retardation-interacting protein 2	1	TIQNS(0.005)S(0.004)VS(0.016)PT(0.052)S(0.067)S(0.31)S(0.31)S(0.086)S(0.113)S(0.032)S(0.003)S(0.001)T(0.001)GETQTQSSSR	78.913	0.00014486	10823000.0	661.87	598.2	741.76	792.13	700.03	688.27	438.36	643.26	717.45	739.99	True	False	632.7749873007609	697.0423823385521	586.0747127501643	722.6851927611648	792.096215076216	821.2684365682222	536.6733887413571	620.6361811967612	684.095906096741	605.9706403502913	1.0442337386758127	1.1502906839440525	0.9671668455939947	1.1926076028096093	1.3071527931094677	1.3552941048323306	0.8856425592354181	1.0242017349850352	1.12892582667254	1.0	9.243104085705406	-8.776298949823225	24.999783792688646	1.0117094005777894	1.1667025518127665	0.30270429837373203	0.11873180191737401	356.41079923268234	599620.8422326178	0.05414659403929175	0.03667265585049155	1.6737903134252532e-09	8.776298949823225	0.15499315123497714	
TIS(ph)NPEVVMK	ddPTM_K562_Methotrexat_30min_R1	1	TISNPEVVMK	10	0	A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6;F8W9I4;E9PFY5	A8MQ02	MLLT4	Afadin	1	T(0.008)IS(0.992)NPEVVMK	94.402	0.0089006	68040000.0	4982.4	3711.5	7781.9	5275.1	3245.6	3247.8	3270.6	4285.9	3796.0	5025.4	True	False	4763.379661757308	4324.7622902867515	6148.585535955704	4812.640173121106	3672.4532886467223	3875.3913846110877	4004.115305268462	4135.162467728752	3619.52478854726	4115.251362878356	1.1574942188769795	1.0509108457622516	1.494097199364065	1.169464450345257	0.8924007222922283	0.9417143797263694	0.972994102228506	1.0048383690556557	0.8795391749814361	1.0	12.006764838979139	-7.662716942464938	5.370468356026254	0.9503647321137018	1.2328805765763384	0.5902215680712317	0.11064174787967936	0.14967159551323803	6.6871466837347135	0.03363206474491525	0.043489176068484424	2.1741177289848394e-08	7.662716942464938	0.28251584446263667	
TIS(ph)NPEVVMKR	ddPTM_K562_Methotrexat_30min_R1	1	TISNPEVVMKR	11	1	A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6;F8W9I4;E9PFY5	A8MQ02	MLLT4	Afadin	1	TIS(1)NPEVVMKR	73.666	0.020045	0.0	2165.9	1938.9	3507.7	3181.6	1810.2	1677.9	1822.1	1990.6	2280.3	2933.1	True	False	2070.689629375434	2259.270269335036	2771.481705556718	2902.6740677526695	2048.2730290572786	2002.1304280555894	2230.7523077507685	1920.5894697171782	2174.2893507176796	2401.8871676798885	0.8621094517839587	0.9406229816854329	1.1538767277872761	1.2084972628237645	0.8527765403051032	0.8335655625278828	0.9287498337840623	0.7996168577612155	0.9052420862958114	1.0	11.22995266449327	-7.806575614092991	24.99980085979037	0.8760890732654085	1.0421305575072213	0.3400348692903815	0.10490628471078962	148.4337057031812	82212.70808546801	0.03462282067559027	0.03925873713556118	1.5610772184571384e-08	7.806575614092991	0.16604148424181275	
TISGPLIPPAS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	TISGPLIPPASPR	13	0	A0A0A0MSG0;A6NGB9	A0A0A0MSG0	WIPF3	WAS/WASL-interacting protein family member 3	1	TISGPLIPPAS(1)PR;TISGPLIPPAS(1)PR;TISGPLIPPAS(1)PR;TISGPLIPPAS(1)PR	148.18	9.920100000000001e-09	114206000.0	7227.299999999999	7039.500000000001	8778.0	8104.2	6548.799999999999	7389.299999999999	7306.500000000001	8868.199999999999	7635.4	8466.300000000001	True	False	6909.5965457246675	8202.657723958937	6935.617758467624	7393.717368582214	7410.0819869021625	8817.177645885426	8945.168616750449	8556.300379456388	7280.431920567367	6932.971029875637	0.9966285039919763	1.1831374584737122	1.0003817596497349	1.0664572715969998	1.0688176764291317	1.2717747712907417	1.2902359721689052	1.2341462761903204	1.050117170430173	1.0	12.759258016753467	-8.228550323484681	21.008799588123335	1.1914502374101414	1.066457798007172	0.20830839120844358	0.09875409980251361	126.65385689465747	80902.7734112027	0.03208389306547453	0.03207702495044907	5.90812501738017e-09	8.228550323484681	-0.12499243940296934	
TISINS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	2	TISINSPK	8	0	A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6	A0A0J9YX88	PHRF1	PHD and RING finger domain-containing protein 1	1	TISINS(1)PK;TISINS(1)PK	102.53	0.014688999999999999	41692600.0	6120.2	4811.299999999999	8706.9	6551.5	4637.700000000001	4402.700000000001	4118.4	5530.2	5637.200000000001	7869.0	True	False	5851.163336120565	5606.285546883104	6879.440676828637	5977.140166859947	5247.638839276843	5253.459464569011	5042.056036573604	5335.699731452798	5375.127802423237	6443.847847830976	0.9080231989167914	0.8700214032474713	1.067598248637153	0.9275731376667864	0.8143641754426617	0.815267459540862	0.7824604422140071	0.8280300617664048	0.8341487771522299	1.0	12.653706714185896	-7.690351532102601	5.5697416767739005	0.8325287640202016	0.9490161859018879	0.29166997940232753	0.07304749235220742	0.22442615926283588	12.511190280287593	0.021372405408890315	0.027500770002856768	2.0400859641326407e-08	7.690351532102601	0.11648742188168626	
TIVEELLADSEFRR	ddPTM_K562_Methotrexat_30min_R1	1	TIVEELLADSEFRR	14	1	Q5QJE6	Q5QJE6	DNTTIP2	Deoxynucleotidyltransferase terminal-interacting protein 2	0		113.52	0.0019903	4871400.0	1856.1	1209.4	1971.6	1860.0	1253.3	1275.1	1259.5	1456.8	1807.4	1786.0	False	True	1774.508066431388	1409.2327937148855	1557.7881035081755	1696.9366878362987	1418.1309177535543	1521.4950287941363	1541.974936398712	1405.5635182778994	1723.3743684985027	1462.5380933061535	1.2133072461859833	0.9635528812307594	1.0651265157727985	1.1602683688055422	0.9696369101387204	1.0403113845429537	1.0543143754382402	0.9610440402960995	1.1783449445769398	1.0	10.514258486320978	-6.2423629187127805	23.857088915917334	1.0446406237145838	1.2133075300504248	0.32846507668050773	0.07277401668273922	2710.8324110280632	3390080.7037526392	0.01725128614921335	0.5726424417244599	5.723175732246089e-07	6.2423629187127805	0.16866690633584103	
TIVLVPS(ph)PLGQQQDMIFEAR	ddPTM_K562_Methotrexat_30min_R1	1	TIVLVPSPLGQQQDMIFEAR	20	0	F5GZT2;Q96R06	F5GZT2	SPAG5	Sperm-associated antigen 5	1	T(0.006)IVLVPS(0.994)PLGQQQDMIFEAR	97.271	0.0022894	0.0	6885.7	5060.1	5644.8	6593.2	5227.7	4970.0	5030.0	6922.2	6419.2	7443.4	True	False	6583.012872704378	5896.1955180062005	4460.033620756212	6015.1843926033725	5915.234180755013	5930.3821606986585	6158.105541949601	6678.742302459692	6120.772793109209	6095.328131979295	1.0800095959012335	0.9673302881056821	0.7317134572881371	0.9868516119820611	0.9704537725738809	0.9729389513231874	1.010299266686061	1.0957149734760792	1.0041744530530552	1.0	12.573488172716246	-8.481299612454736	1.4117160363195635	1.0379248129902023	0.9332523267591485	0.16242183223106899	0.08548657491894214	0.710782894629428	2.8700536495049884	0.0461179939496838	0.03475501724424866	3.301417032496927e-09	8.481299612454736	-0.10467248623105385	
TKEVYELLDS(ph)PGK	ddPTM_K562_Methotrexat_30min_R1	1	TKEVYELLDSPGK	13	1	E9PBS1;P22234;P22234-2	E9PBS1	PAICS	Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase	1	TKEVYELLDS(1)PGK	96.544	0.0056826	7790700.0	5876.9	3147.9	8746.7	5458.1	3775.9	3336.9	3250.4	5416.4	5320.7	7371.3	True	False	5618.5585128013645	3668.0369698487593	6910.887200727816	4979.596847246935	4272.497033707532	3981.7086985986643	3979.3849410642083	5225.902141955255	5073.341818341251	6036.286140642584	0.9307972455068622	0.6076645282190489	1.144890589960026	0.8249438033957813	0.7078022701642023	0.659628885348831	0.6592439205740815	0.8657479152237371	0.8404740431674064	1.0	12.559445480835084	-5.866867782870504	19.864702467081035	0.8038795841687967	56.93208262716637	0.04587516167937189	0.15805733378537087	2253.5999241030354	336519.25010330643	0.038375737614764927	4430.985458616681	1.358727036104799e-06	5.866867782870504	56.128203042997576	
TKEVYELLDS(ph)PGKVLLQSK	ddPTM_K562_Methotrexat_30min_R1	1	TKEVYELLDSPGKVLLQSK	19	2	E9PBS1;P22234;P22234-2	E9PBS1	PAICS	Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase	1	TKEVYELLDS(0.998)PGKVLLQS(0.001)K	66.12	0.015449000000000001	4696100.0	5201.2	3386.6	10912.0	6453.6	3704.0	2785.7	2609.2	4203.4	4543.4	8535.3	True	False	4972.561475741032	3946.178087642493	8621.720321303113	5887.8229078603945	4191.140923449426	3323.997099609305	3194.3795188975923	4055.564039490199	4332.178325681139	6989.474461251969	0.7114356742138145	0.5645886696516588	1.2335291257017875	0.8423842079259498	0.5996360594325285	0.4755718213202977	0.4570271393945989	0.5802387664442168	0.6198146011832125	1.0	12.770968268066932	-7.767209218940979	6.826266757817125	0.584753573448074	0.8474496751985184	0.18696916007376907	0.21202638775363983	0.20200324145765675	45.81671749313774	0.06532202667121736	0.07840407538578009	1.709191723159575e-08	7.767209218940979	0.26269610175044444	
TKFICVTPTTCSNTIDLPMS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	TKFICVTPTTCSNTIDLPMSPR	22	1	G8JLH9;P40763-2;P40763	G8JLH9	STAT3	Signal transducer and activator of transcription;Signal transducer and activator of transcription 3	1	TKFICVTPT(0.002)T(0.002)CS(0.01)NT(0.05)IDLPMS(0.935)PR	58.903999999999996	0.019976	19496000.0	1851.3	1314.7	1863.0	1819.5	1001.8	863.04	1078.4	1926.1	1885.6	2679.3	True	False	1769.9190686840295	1531.9318289209207	1471.9817594013657	1659.9872599559903	1133.5542594793835	1029.8102655873981	1320.2586513794135	1858.3579712761268	1797.9388675670984	2194.052807052172	0.806689366361246	0.6982201266974761	0.6708962312438835	0.7565849165619093	0.5166485764772338	0.4693643937271518	0.6017442456880754	0.8469978321866058	0.8194601614820411	1.0	11.099382533992742	-9.623593833119289	1.815005832027848	0.9538385739066411	0.6433570361314199	0.5308683553785043	0.10484074267597521	0.30092375374075064	1.8077531988789155	0.10476773635565574	0.032402831134894755	2.379064227799907e-10	9.623593833119289	-0.31048153777522114	
TKLHQLS(ph)GSDQLESTAHSR	ddPTM_K562_Methotrexat_30min_R1	1	TKLHQLSGSDQLESTAHSR	19	1	A0A087X2D8;O60271-4;O60271-2;O60271;O60271-5;O60271-3	A0A087X2D8	SPAG9	C-Jun-amino-terminal kinase-interacting protein 4	1	T(0.041)KLHQLS(0.741)GS(0.218)DQLESTAHSR	85.20299999999999	0.0038158000000000003	55853000.0	3316.5	2369.9	4306.0	4414.2	2792.4	2414.8	2618.9	3037.4	3008.4	4322.4	True	False	3170.710631064973	2761.485693587655	3402.2294449716996	4027.213939487625	3159.6495449892486	2881.42592387427	3206.254990817455	2930.572920385292	2868.5401406389815	3539.571475087635	0.8957894065372618	0.7801751463485518	0.9611981192970444	1.1377687858070211	0.8926644276652218	0.8140606692517574	0.9058314017343223	0.8279456824113814	0.8104201768006282	1.0	11.789358992939825	-7.991226335139352	24.991936453777154	0.8619597509885243	0.9435375290205661	0.10624813445117587	0.09700116881835855	441.45580801896347	1257485.3915946926	0.03199952647721482	0.036232222147988984	1.0204075536752171e-08	7.991226335139352	0.0815777780320418	
TKLMLMS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TKLMLMSR	8	1	E7EU85;E9PFF5;B4DXZ6;P51114-3;P51114-2;P51114;C9JZE0;C9JY20	E7EU85	FXR1	Fragile X mental retardation syndrome-related protein 1	1	TKLMLMS(1)R	80.24	0.024653	15516000.0	6144.1	5470.6	5969.3	6063.0	5703.2	5214.1	5174.2	6537.1	6553.4	6515.6	True	False	5874.012720737616	6374.523665699235	4716.425505311095	5531.466203414771	6453.270765285308	6221.651031005811	6334.646062655188	6307.186487736447	6248.733864400841	5335.5617025451165	1.1009174006807294	1.1947240086565811	0.8839604465751586	1.036716752947718	1.2094829232706714	1.1660723608609045	1.1872500808365685	1.1821035608543062	1.1711482713094916	1.0	12.381424443775346	-7.7519021730529865	24.996238404985434	1.1641798809762465	1.051974284023787	0.21722804822512676	0.09008185086354058	283.8832845753564	744030.8534724646	0.026906772674741265	0.03427195163796356	1.7705077288913327e-08	7.7519021730529865	-0.11220559695245957	
TKPIVKPQT(ph)SPEYGQGINPISR	ddPTM_K562_Methotrexat_30min_R1	1	TKPIVKPQTSPEYGQGINPISR	22	2	A0A087X1A5;O95793-2;O95793-3;O95793	A0A087X1A5	STAU1	Double-stranded RNA-binding protein Staufen homolog 1	1	TKPIVKPQT(0.441)S(0.441)PEY(0.117)GQGINPISR	58.479	0.017152	16233000.0	1422.5	872.28	2398.5	1222.7	1134.5	806.09	890.81	1090.9	1270.8	1691.2	True	False	1359.9686032534057	1016.4094437751123	1895.0876274418545	1115.5077893642165	1283.706635435576	961.8554840880449	1090.5968186529067	1052.5324286719942	1211.7207853756213	1384.9072919369353	0.981992521211546	0.733918760983314	1.3683859118045218	0.8054747027897182	0.9269260425657664	0.6945269836385879	0.787487238317299	0.7600020844716034	0.8749472202438223	1.0	10.435573687695076														
TKSPPASSAASADQHSQS(ph)GSSSDNTER	ddPTM_K562_Methotrexat_30min_R1	2	TKSPPASSAASADQHSQSGSSSDNTER	27	1	Q8IY57-3;Q8IY57;Q8IY57-5	Q8IY57-3	YAF2	YY1-associated factor 2	1	TKSPPASSAASADQHSQS(0.937)GS(0.044)S(0.015)S(0.004)DNTER;TKSPPASSAASADQHS(0.003)QS(0.391)GS(0.391)S(0.106)S(0.106)DNT(0.002)ER	128.92	3.6871e-17	5266000.0	3244.19	2550.15	4649.1	3297.8199999999997	2566.46	2415.11	2044.77	2723.8	2744.33	4201.200000000001	True	False	3101.5792920834233	2971.5189423615143	3673.31744371062	3008.7052407958604	2903.994474728947	2881.795826986909	2503.3617234616863	2628.0024101354634	2616.7466973008145	3440.321969539651	0.9015375071125814	0.8637328042756222	1.0677249037252599	0.8745417630776153	0.8441054356076824	0.8376529442599007	0.7276533259463098	0.7638826927838722	0.7606109894565947	1.0	11.748327873462054	-7.790888398996615	2.167868863606283	0.7998292820154173	0.938281302290204	0.264700879065347	0.08656590725129812	0.3603599009611064	3.4789206360256153	0.028858660818348387	0.03636181904237778	1.618495890404458e-08	7.790888398996615	0.13845202027478676	
TKSPPASSAASADQHSQSGS(ph)SSDNTER	ddPTM_K562_Methotrexat_30min_R1	1	TKSPPASSAASADQHSQSGSSSDNTER	27	1	Q8IY57-3;Q8IY57;Q8IY57-5	Q8IY57-3	YAF2	YY1-associated factor 2	1	TKSPPASSAASADQHS(0.003)QS(0.007)GS(0.555)S(0.372)S(0.057)DNT(0.006)ER	171.48	2.4990999999999994e-68	0.0	290.54	222.65	509.14	405.58	183.76	199.85	161.66	207.1	283.02	486.04	True	False	277.7682094827732	259.4391280970888	402.2784718097749	370.02343110357276	207.92766093225353	238.4681840675306	197.91637016134635	199.81617561460254	269.8624619743532	398.0134461761047	0.6978864964272391	0.6518350839390928	1.0107157827823312	0.9296757048249382	0.5224136594627862	0.5991460498598787	0.49726051233398894	0.5020337316096403	0.678023480279483	1.0	8.636673360251955	-5.842946972129274	15.882812976758224	0.6936553645606197	2.0284624205305826	0.0	0.19121159965473317	11338.3593727764	1128071.7354865917	0.0495346582848246	8944.143746675958	1.435664719015091e-06	5.842946972129274	1.334807055969963	
TKSPPASSAASADQHSQSGS(ph)SSDNTERGMSR	ddPTM_K562_Methotrexat_30min_R1	1	TKSPPASSAASADQHSQSGSSSDNTERGMSR	31	2	Q8IY57-3;Q8IY57;Q8IY57-5	Q8IY57-3	YAF2	YY1-associated factor 2	1	TKSPPASSAASADQHS(0.043)QS(0.049)GS(0.181)S(0.181)S(0.181)DNT(0.181)ERGMS(0.181)R	43.291000000000004	0.01956	1561500.0	163.9	0.0	123.22	323.29	0.0	132.96	139.36	139.71	208.98	62.126999999999995	True	False	156.69515224831872	0.0	97.35780590093192	294.9476676401058	0.0	158.6526382467794	170.61502750021793	134.79632011161817	199.26456541375285	50.87519827706124	3.079990988830601	0.0	1.9136594882781794	5.797474557914258	0.0	3.118467222137848	3.3535992640473964	2.6495487914863918	3.916732949689512	1.0	5.668890606925226	-7.011118566188645	24.95381372536664	2.8977006397582468	1.3942038249512827	0.09824142638133981	1.6293831896689277	1002.8065197685895	2250651.1428411338	0.4138940188415479	0.7783196787934819	9.747234933578571e-08	7.011118566188645	-1.503496814806964	
TKSPPASSAASADQHSQSGSSSDNTERGMS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TKSPPASSAASADQHSQSGSSSDNTERGMSR	31	2	Q8IY57-3;Q8IY57;Q8IY57-5	Q8IY57-3	YAF2	YY1-associated factor 2	1	TKSPPASSAASADQHS(0.019)QS(0.161)GS(0.161)S(0.161)S(0.161)DNT(0.072)ERGMS(0.263)R	53.751000000000005	0.0021535	1528800.0	273.48	133.74	374.65	458.5	101.54	188.61	262.66	386.14	197.08	255.5	True	False	261.458146655706	155.8382618086893	296.0160848951805	418.3040168671733	114.89428978592196	225.05621314474328	321.5681911826006	372.5592373337646	187.9177938163576	209.22647415437973	1.249641794674543	0.7448305117147965	1.414811801860037	1.9992881807037657	0.5491383929795907	1.075658393873633	1.5369383462693562	1.7806505550481544	0.8981549518332019	1.0	7.7089216021373765	-8.748303962652264	24.914658953216943	1.3689902175860251	1.1730989261373554	0.012936427504121273	0.4341219196900441	865.0441305052751	1640777.2937719168	0.1709759231668418	0.13161069268509457	1.7852376498893933e-09	8.748303962652264	-0.19589129144866968	
TLDFDPLLS(ph)PASPK	ddPTM_K562_Methotrexat_30min_R1	2	TLDFDPLLSPASPK	14	0	Q53H80	Q53H80	AKIRIN2	Akirin-2	1	TLDFDPLLS(0.95)PAS(0.05)PK;TLDFDPLLS(0.697)PAS(0.303)PK	164.92	8.3017e-09	21057700.0	10058.8	7742.6	14493.5	11213.6	7846.1	6928.799999999999	6897.9	9245.9	9904.8	13310.8	True	False	9616.627196067036	9021.933048302364	11451.512415396506	10230.521098237155	8877.999675884605	8267.692538239204	8444.929665569403	8920.716456373992	9444.328009905925	10900.085135710826	0.8822524848508817	0.8276938148624853	1.0505892635534648	0.9385725864397108	0.8144890214479636	0.7584979782545564	0.7747581381637241	0.8184079615257286	0.8664453435289644	1.0	13.412051782844141	-7.762691592051954	24.999909318244697	0.8224729598097612	0.9268291203081763	0.19378676288362862	0.08195642877282681	46.265442986973504	923678.3361743699	0.02505523269897091	0.03001991513478486	1.7270639060865942e-08	7.762691592051954	0.10435616049841512	
TLDFDPLLSPAS(ph)PKR	ddPTM_K562_Methotrexat_30min_R1	2	TLDFDPLLSPASPKR	15	1	Q53H80	Q53H80	AKIRIN2	Akirin-2	1	TLDFDPLLS(0.077)PAS(0.923)PKR;TLDFDPLLS(0.049)PAS(0.951)PKR	89.46799999999999	0.0089403	17747400.0	6017.5	4445.8	8460.0	6049.200000000001	4628.6	5044.0	4460.4	5575.4	5907.200000000001	7340.8	True	False	5752.977905151057	5180.3928843208505	6684.361612740495	5518.876027988892	5237.342029772686	6018.681613393164	5460.758242407947	5379.310021833196	5632.575561355735	6011.3099861936225	0.957025659692166	0.861774371346484	1.111964218796351	0.9180820887068343	0.8712480377490872	1.0012262929738232	0.9084140154059355	0.8948648521184297	0.9369963575813359	1.0	12.553463702328218														
TLDSGTSEIVKS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	3	TLDSGTSEIVKSPR	14	1	Q9H501	Q9H501	ESF1	ESF1 homolog	1	TLDSGTSEIVKS(1)PR;TLDSGTSEIVKS(1)PR;TLDSGTSEIVKS(1)PR	124.62	0.0020099000000000002	81006600.0	4709.1	3446.2299999999996	5802.6	4367.4	3817.42	3236.55	3014.12	3735.74	3645.8	4977.6	True	False	4502.093602517132	4015.660931605799	4584.713557220806	3984.5168228259377	4319.47764146715	3861.9674813298298	3690.1131364018156	3604.35190676241	3476.3075537633267	4076.108406069828	1.1045078182447159	0.9851702976363397	1.1247771404689832	0.9775296498229784	1.0597062715591457	0.9474643695881306	0.9053029921644827	0.8842630145447274	0.8528496319152543	1.0	11.992976705846775	-8.417297150113138	2.41132384964092	0.9002759528082788	1.048510487614758	0.5874133959498458	0.05564465120447566	0.1976689606088468	2.2570159111487653	0.021241042063360093	0.017744926738242454	3.82562899078482e-09	8.417297150113138	0.1482345348064792	
TLEEVVMAEEEDEGTDRPGS(ph)PA	ddPTM_K562_Methotrexat_30min_R1	1	TLEEVVMAEEEDEGTDRPGSPA	22	1	F8WC89;A6NKF1	F8WC89	SAC3D1	SAC3 domain-containing protein 1	1	TLEEVVMAEEEDEGT(0.012)DRPGS(0.988)PA	92.412	0.00079736	0.0	693.86	701.06	1194.3	869.59	644.05	716.91	531.53	646.38	689.99	992.56	True	False	663.3587452045051	816.8982490174942	943.6327510751745	793.3543948255735	728.7538638627443	855.4427112326914	650.7391329448247	623.6464490283283	657.9125155030883	812.7977658969517	0.8161424317800194	1.0050448995956793	1.1609686820851945	0.9760784639338647	0.8965992457650743	1.0524668584548575	0.8006162913436538	0.7672836653778348	0.8094418354817426	1.0	9.666752626415047	-8.769860264252065	24.99502095115789	0.824942386288098	0.9891178675774132	0.298121221774983	0.10356227137797634	210.9804385303548	626229.0868917886	0.04334475644611743	0.029758696148645836	1.6987901561311307e-09	8.769860264252065	0.16417548128931514	
TLEGELHDLR	ddPTM_K562_Methotrexat_30min_R1	5	TLEGELHDLR	10	0	P02545-3;P02545;P02545-5;P02545-4;P02545-6;H0YAB0;Q3BDU5;P02545-2;Q5TCI8	P02545-3;Q3BDU5	LMNA	Prelamin-A/C;Lamin-A/C	0	;;;;	164.33	1.4118e-05	59113200.0	21232.899999999998	18720.399999999998	25446.4	20929.0	19820.3	18268.0	17687.199999999997	21664.9	22059.0	22888.7	False	True	20299.527139556598	21813.627907607195	20105.548385631177	19094.18706436876	22427.016858813353	21798.032457071044	21654.00483927852	20902.933187217786	21033.481904785018	18743.33463396224	1.083026448387396	1.1638072057936635	1.0726772358425833	1.0187187838908232	1.1965329167295777	1.162975152648334	1.1552909480708013	1.1152195484651077	1.122184622723062	1.0	14.194090025817848	-6.012702559834184	17.598880225484965	1.117366788582619	1.0625083009918248	0.012814799566862711	0.06121578484435202	24579211.82859142	1068693716.3277364	0.015228530169029987	21081371.173743784	9.711748790324557e-07	6.012702559834184	-0.05485848759079426	
TLENPVNVYNPSHS(ph)DSLASQQSVASHPR	ddPTM_K562_Methotrexat_30min_R1	1	TLENPVNVYNPSHSDSLASQQSVASHPR	28	0	F1T0I1;O15027-2;O15027-4;O15027-3;O15027;O15027-5;A0A3F2YNX0;A0A3F2YNZ0	F1T0I1	SEC16A	Protein transport protein Sec16A	1	TLENPVNVY(0.004)NPS(0.24)HS(0.676)DS(0.05)LAS(0.02)QQS(0.007)VAS(0.002)HPR	71.47	0.00012504	0.0	331.15	244.31	415.27	246.16	238.45	316.18	208.1	347.7	350.63	320.91	True	False	316.5930425078141	284.6780749400393	328.1105020003246	224.57953498805546	269.8103545346966	377.27731017499025	254.7717223220102	335.47119392176404	334.32928783148714	262.7900893185207	1.2047373754802462	1.0832907575711077	1.248564977664096	0.8545966690389482	1.0267143454092245	1.4356603445486207	0.9694875593775089	1.2765747551276507	1.272229438707088	1.0	8.037767057670003														
TLEPVKPPTVPNDYMTS(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	1	TLEPVKPPTVPNDYMTSPAR	20	1	B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0	B6VEX4	ABI1	Abl interactor 1	1	TLEPVKPPTVPNDY(0.244)MT(0.3)S(0.456)PAR	61.903	0.026621	19797000.0	1737.9	1570.4	2728.7	2146.2	1384.3	1171.1	1264.7	1730.6	1802.5	1928.4	True	False	1661.503996902704	1829.881907764063	2155.9831598918427	1958.0459781904638	1566.3597139122696	1397.3985006829364	1548.3411687681232	1669.7338170865826	1718.7021684289855	1579.148073421942	1.0521521223163706	1.1587779123200221	1.3652824558877024	1.239938173718863	0.9919017350399824	0.8849065671560726	0.9804914401807415	1.057363679308645	1.0883730267957938	1.0	10.624930740708644	-7.765150643888341	24.963555157869738	0.9965935218948697	1.212322327842366	0.5608361792601045	0.08807060107474299	73.15752160654763	492089.3819171958	0.029565431646756953	0.034818976719664115	1.7173125989734912e-08	7.765150643888341	0.21572880594749633	
TLGT(ph)PTQPGSTPR	ddPTM_K562_Methotrexat_30min_R1	2	TLGTPTQPGSTPR	13	0	Q8NFH5;Q8NFH5-2;Q8NFH5-3	Q8NFH5	NUP35	Nucleoporin NUP53	1	T(0.007)LGT(0.678)PT(0.315)QPGSTPR;T(0.051)LGT(0.789)PT(0.113)QPGS(0.035)T(0.011)PR	105.66	0.0074493	71714000.0	2345.6	1804.6399999999999	2846.8999999999996	2026.42	1704.76	1865.66	1585.33	2216.18	2085.24	2094.0	True	False	2242.490232542137	2102.8260863648356	2249.3745951904166	1848.766904820017	1928.9658209124327	2226.172390730193	1940.8806081151008	2138.2356932572175	1988.2976475422254	1714.7563087251326	1.3077603045585866	1.2263119112990584	1.3117750806601527	1.0781513941153056	1.124921256214277	1.2982441758066965	1.131869641324186	1.2469618466351808	1.1595219900491063	1.0	10.743787848130564	-15.999999999999988	0.14671997413716584	0.28652935756933096	1.2740660316504295	0.43798333608612805	0.07575421641943611	139.73325647413785	1.2288880678708125	29.23712133876385	0.420510487398473	1.0000000000000286e-16	15.999999999999988	0.9875366740810986	
TLGTPTQPGST(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	TLGTPTQPGSTPR	13	0	Q8NFH5;Q8NFH5-2;Q8NFH5-3	Q8NFH5	NUP35	Nucleoporin NUP53	1	TLGT(0.006)PT(0.02)QPGS(0.055)T(0.918)PR;TLGTPTQPGS(0.084)T(0.916)PR	127.3	0.0014698	33398000.0	3386.3	2667.8	2871.8	3649.1000000000004	2810.2	3019.7	2761.8	3092.9	3497.8	3972.1	True	False	3237.442306641134	3108.608605153442	2269.0484254690505	3329.1890685932444	3179.7905569863897	3603.2142878595027	3381.203953430696	2984.1209539275933	3335.1880414595876	3252.714199564038	0.9953048771008068	0.9556968163910895	0.6975861653548201	1.023511093916415	0.9775806793638917	1.1077561896899648	1.039502318981446	0.917424886062094	1.0253553914778628	1.0	11.66742834989833														
TLHCEGTEINS(ph)DDEQESK	ddPTM_K562_Methotrexat_30min_R1	1	TLHCEGTEINSDDEQESK	18	0	Q9BPX3;H0Y9Z8	Q9BPX3	NCAPG	Condensin complex subunit 3	1	TLHCEGTEINS(0.987)DDEQES(0.013)K	117.03	0.00027539	118960000.0	743.37	330.34	704.97	583.45	624.35	353.57	492.46	317.2	578.64	760.44	True	False	710.692344886105	384.9230701800687	557.0064309850671	532.2998443645631	706.4629685625408	421.892398502661	602.9066908923459	306.0438962093284	551.7391526988897	622.7169471857403	1.1412767038025127	0.618134887639819	0.8944777133533297	0.8548022448565092	1.1344848919806598	0.677502676632344	0.9681873821116906	0.49146550064590333	0.8860191700135636	1.0	9.282432732340038														
TLHCEGTEINS(ph)DDEQESKEVEETATAK	ddPTM_K562_Methotrexat_30min_R1	4	TLHCEGTEINSDDEQESKEVEETATAK	27	1	Q9BPX3;H0Y9Z8	Q9BPX3	NCAPG	Condensin complex subunit 3	1	TLHCEGT(0.036)EINS(0.963)DDEQES(0.001)KEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGT(0.261)EINS(0.73)DDEQES(0.008)KEVEETATAK	101.41	4.6985e-08	159477000.0	6848.7	4440.03	12287.1	7655.8	4398.51	3383.6900000000005	3338.3900000000003	5493.04	5703.36	9602.1	True	False	6547.63934840183	5173.669489894086	9708.20562315647	6984.627900396307	4976.991161771476	4037.540203890233	4087.1089384073794	5299.84666971529	5438.212038463882	7863.066643748608	0.8327081080518902	0.657970957680655	1.2346589521627425	0.8882829329634784	0.6329580286246645	0.5134816206982308	0.5197856159157398	0.6740177731965225	0.6916146441143846	1.0	12.940876366723257	-7.74539336713313	6.823872228963013	0.6397650052231011	0.9108555367926799	0.2649869802367496	0.18418225068467342	0.1878792130869383	36.86146306221526	0.05562621482558648	0.06933276227070528	1.7972423051531754e-08	7.74539336713313	0.27109053156957885	
TLHS(ph)DDEGTVLDDSR	ddPTM_K562_Methotrexat_30min_R1	1	TLHSDDEGTVLDDSR	15	0	E9PMH2;O00170	E9PMH2	AIP	AH receptor-interacting protein	1	T(0.012)LHS(0.988)DDEGTVLDDSR	115.1	0.0011205	7091100.0	800.46	843.91	1292.9	992.19	922.82	1036.0	853.99	828.8	811.33	1161.5	True	False	765.2727368437411	983.3517834826607	1021.537958523899	905.2062431743525	1044.187005123543	1236.1923377231014	1045.5189963756536	799.6506342316878	773.6114453877891	951.141094834881	0.8045838214745554	1.033865310649175	1.0740130608080172	0.951705533584896	1.097825560049863	1.2996939617436103	1.0992259739940653	0.8407276676132976	0.8133508788431529	1.0	9.893515560008563	-9.26336574860433	24.959725444094342	0.8702794447336831	1.0592247362463412	0.26523150928119943	0.1261433073204481	222.3502733391028	2880906.067157905	0.06876430402875221	0.03564606623861505	5.452984351595094e-10	9.26336574860433	0.18894529151265804	
TLHS(ph)PPLQLQQR	ddPTM_K562_Methotrexat_30min_R1	1	TLHSPPLQLQQR	12	0	A0A2R8YGT1;F8W9A8;B7WPL9;Q6PFW1-7;Q6PFW1-4;Q6PFW1-3;Q6PFW1-2;Q6PFW1	A0A2R8YGT1	PPIP5K1	Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1	1	T(0.012)LHS(0.988)PPLQLQQR	82.515	0.022399000000000002	24302000.0	1990.9	1439.1	1997.1	1964.9	1653.2	1603.4	1662.3	1779.0	2007.8	2053.7	True	False	1903.3824198363495	1676.886814482463	1577.9360019862945	1792.6402677040537	1870.624777172408	1913.2343574374706	2035.113089936941	1716.431561653201	1914.457816239511	1681.755029240116	1.1317833969531066	0.9971052771224043	0.9382674495103303	1.0659342392536444	1.1123051482816917	1.137641525770817	1.2101126826161395	1.0206192529887979	1.138369015078575	1.0	10.715751857175892	-7.5330994926509245	5.5432327410032	1.109973107366599	1.0168698778292258	0.1982104140503238	0.07176747624696969	0.2319506241257852	23.75024933248896	0.021033182332866603	0.028547431523019497	2.9302218829567303e-08	7.5330994926509245	-0.09310322953737327	
TLHSDDEGTVLDDSR	ddPTM_K562_Methotrexat_30min_R1	1	TLHSDDEGTVLDDSR	15	0	E9PMH2;O00170	E9PMH2	AIP	AH receptor-interacting protein	0		184.0	1.1571e-05	5692000.0	1899.3	1672.8	1883.2	1809.7	1431.2	1517.5	1615.6	1838.4	1779.7	1875.8	False	True	1815.809046157607	1949.2017672616682	1487.9420554506974	1651.0464107405103	1619.4278859721446	1810.7353981610095	1977.939426157807	1773.742429984961	1696.9621354524645	1536.0744431263618	1.1821100561128428	1.2689500668304012	0.968665328759913	1.074847913868124	1.0542639344198281	1.178807059946673	1.2876585734556723	1.1547242634770196	1.1047395150970998	1.0	10.585032420074505	-8.293514292656015	24.547535678818512	1.1637606966779015	1.1088319309218357	0.013770125044783255	0.10037258641551766	1772.0522434859186	1356179.105396815	0.03687763809712035	0.03252632437188472	5.087280770993417e-09	8.293514292656015	-0.054928765756065756	
TLLEQLDDDQ	ddPTM_K562_Methotrexat_30min_R1	1	TLLEQLDDDQ	10	0	O75400-3;O75400;O75400-2	O75400-3	PRPF40A	Pre-mRNA-processing factor 40 homolog A	0		120.87	4.0655e-08	0.0	2077.3	1717.8	2101.5	1900.6	2011.0	1751.5	1769.3	2125.9	1944.9	2002.2	False	True	1985.9843792887882	2001.6372523924524	1660.4238686967078	1733.9773488718652	2275.481748665443	2089.952586411207	2166.1105636921325	2051.130892028409	1854.4820235104214	1639.5821782853195	1.211274680580962	1.2208215476492745	1.0127115863342602	1.0575726986037775	1.3878424508402192	1.2746860841076513	1.3211357090728189	1.2510082868633572	1.1310698835784156	1.0	10.679112498215868	-4.923602415735428	2.5131417371326195	1.196823881533046	9.990374605257271	0.0	0.12564078437563383	22549.601864977212	314.73238624994156	0.034479603611771416	1138462.0837588257	1.1923330555907486e-05	4.923602415735428	8.793550723724225	
TLLISSLS(ph)PALPAEHLEDR	ddPTM_K562_Methotrexat_30min_R1	3	TLLISSLSPALPAEHLEDR	19	0	Q8NDT2	Q8NDT2	RBM15B	Putative RNA-binding protein 15B	1	TLLIS(0.003)S(0.043)LS(0.954)PALPAEHLEDR;TLLIS(0.004)S(0.018)LS(0.978)PALPAEHLEDR;TLLIS(0.029)S(0.103)LS(0.867)PALPAEHLEDR	142.22	1.5157999999999999e-09	10341700.0	4400.7	3174.58	3777.1	4188.79	3735.7	3053.9700000000003	3321.85	5198.3	4934.9	5317.0	True	False	4207.250497249398	3699.1253863663	2984.338327125549	3821.565284216027	4227.01002908478	3644.106480343838	4066.8594223708287	5015.472842575509	4705.477576133265	4354.039777216586	0.9662866470041699	0.8495846560067593	0.6854182505960824	0.8777056434378845	0.9708248535540454	0.8369483667587005	0.9340427810631202	1.151912499472331	1.080715339523458	1.0	12.088138872282597	-9.07593927675758	4.285604923712969	1.0854078243364822	0.8621440798282095	0.5734668661732434	0.08189889872915632	0.1652998623552763	5.650043998838492	0.042226677644338226	0.024025133933425008	8.395773683840258e-10	9.07593927675758	-0.2232637445082727	
TLLLSS(ph)DDEF	ddPTM_K562_Methotrexat_30min_R1	3	TLLLSSDDEF	10	0	A0A0J9YYJ3;Q9Y519	A0A0J9YYJ3	TMEM184B	Transmembrane protein 184B	1	TLLLS(0.086)S(0.913)DDEF;T(0.001)LLLS(0.273)S(0.726)DDEF;TLLLS(0.064)S(0.935)DDEF	123.86	0.0027039	1393900.0	3884.08	3750.68	5024.4	5016.200000000001	4487.4	3707.6299999999997	3741.1	4380.54	4255.8	4922.4	True	False	3713.340493866075	4370.4161193406235	3969.847102488575	4576.437534152923	5077.571754829097	4424.077024239673	4580.136907154599	4226.473925286295	4057.948786907117	4030.9056609687646	0.9212174151884349	1.0842268430291824	0.9848523970502661	1.1353372961482429	1.2596602803174468	1.0975392123606327	1.136255048463187	1.0485172020301086	1.0067089453866933	1.0	11.976888303513402	-5.504036726787577	1.0605917782137766	1.09971756329849	0.34166253674963626	0.2717497389650987	0.0783425913285797	10.277358385230194	2.937189665550841	0.025635289683075935	12.92561933188769	3.1330207643440066e-06	5.504036726787577	-0.7580550265488537	
TLMLPLTEGS(ph)LR	ddPTM_K562_Methotrexat_30min_R1	1	TLMLPLTEGSLR	12	0	Q7L4E1-3;Q7L4E1	Q7L4E1-3	FAM73B	Protein FAM73B	1	TLMLPLTEGS(1)LR	97.463	0.0080821	8936200.0	4421.4	2816.3	2919.7	4285.8	3601.6	2726.6	3182.9	4778.5	5265.1	5676.6	True	False	4227.040550034877	3281.6457060850285	2306.8948700612796	3910.0705681337677	4075.273528589489	3253.4768610384244	3896.7463478074287	4610.437446520414	5020.326650205524	4648.5127326213415	0.9093318214170423	0.7059560540849539	0.4962651503291461	0.8411444246876013	0.8766833099091895	0.6998962997792537	0.8382780841841463	0.9918091466473284	1.079985565055022	1.0	12.182553491961563	-9.196614810404919	2.456425326578941	1.0403133218696405	0.750191654327361	0.541245470751361	0.1108793681175214	0.24412674470066387	2.840383945475025	0.07285864567386768	0.033782698161661254	6.358946770360013e-10	9.196614810404919	-0.2901216675422795	
TLNAETPKS(ph)SPLPAK	ddPTM_K562_Methotrexat_30min_R1	1	TLNAETPKSSPLPAK	15	1	Q7L2J0	Q7L2J0	MEPCE	7SK snRNA methylphosphate capping enzyme	1	TLNAET(0.003)PKS(0.821)S(0.175)PLPAK	130.47	0.00057078	13421000.0	2216.8	1203.7	3602.6	2252.9	1374.1	1011.8	937.06	1262.0	1845.1	2578.5	True	False	2119.352126321372	1402.5909655983196	2846.463492441951	2055.3917548529002	1554.8182351273922	1207.316030220302	1147.2195584769959	1217.6147446915909	1759.3217037272245	2111.5086638241423	1.0037146248232884	0.6642601044591948	1.3480709509790672	0.9734233110511566	0.7363541820905765	0.5717788664119134	0.5433174763295892	0.5766562863570615	0.8332060075666117	1.0	11.044058451398973	-7.8034677473916645	4.1640675000158165	0.6682088917176934	1.0011484601159573	0.321314831616324	0.20130644039158901	0.23169874059166662	8.552756782156036	0.06311807252956728	0.07502536602178009	1.572288553154282e-08	7.8034677473916645	0.3329395683982639	
TLNMTT(ph)SPEEK	ddPTM_K562_Methotrexat_30min_R1	1	TLNMTTSPEEK	11	0	P49915-2;P49915	P49915-2	GMPS	GMP synthase [glutamine-hydrolyzing]	1	TLNMT(0.005)T(0.869)S(0.125)PEEK	169.89	0.0009366	42962000.0	3802.2	2301.3	5023.3	3656.7	2543.2	2922.6	1978.2	3247.2	2949.3	3828.7	True	False	3635.0598406257322	2681.550709588282	3968.9779774561857	3336.122788393004	2877.675377029314	3487.351087094143	2421.8617063786655	3132.9941354695184	2812.1876867393107	3135.2853291384495	1.1594031990780937	0.8552812353844523	1.2659064680874925	1.0640571553051419	0.9178352446219227	1.1122914570752762	0.7724533661643399	0.9992692232353982	0.8969479302580976	1.0	11.614381027275222	-8.067897248527403	1.4039305789863925	0.9326370396504151	1.0783128124235135	0.19490157676618525	0.12775723494934546	0.7000228923319933	2.8182905876680153	0.05315908576400348	0.05635436675241943	8.552690404801237e-09	8.067897248527403	0.1456757727730984	
TLNMTTS(ph)PEEK	ddPTM_K562_Methotrexat_30min_R1	3	TLNMTTSPEEK	11	0	P49915-2;P49915	P49915-2	GMPS	GMP synthase [glutamine-hydrolyzing]	1	TLNMT(0.014)T(0.201)S(0.786)PEEK;TLNMT(0.15)T(0.193)S(0.657)PEEK;TLNMT(0.001)T(0.08)S(0.919)PEEK	128.57	0.0011534000000000002	197128000.0	16654.8	12342.2	25081.5	18549.9	13074.6	12095.7	10843.3	14498.4	15510.699999999999	19631.0	True	False	15922.674933894443	14381.538768470207	19817.235908977647	16923.65906757772	14794.139070661951	14433.022837256092	13275.186048314534	13988.483054228656	14789.610942497347	16075.635671720662	0.9904849337873899	0.8946171126389352	1.2327497533325538	1.0527520910012194	0.9202833015609426	0.8978197274429303	0.8257954036410194	0.8701667131481708	0.9200016250999259	1.0	13.972588166079776	-7.826469633958385	4.560858537221072	0.8922011441227218	1.0458889567295397	0.362105854450277	0.08855011801931344	0.2246484066445608	9.144682091000426	0.028913699586941698	0.03371698092385458	1.4911810157729897e-08	7.826469633958385	0.15368781260681796	
TLPIENTT(ph)DCLSTMT(ph)SVCK	ddPTM_K562_Methotrexat_30min_R1	1	TLPIENTTDCLSTMTSVCK	19	0	Q9H0Q0	Q9H0Q0	FAM49A	Protein FAM49A	2	T(0.158)LPIENT(0.158)T(0.683)DCLS(0.004)T(0.029)MT(0.484)S(0.484)VCK	47.20399999999999	0.031849	0.0	1003.8	1226.1	1409.5	1356.6	1054.2	1025.2	1427.4	1083.7	1034.9	1170.8	True	False	959.674153916182	1428.6921848634217	1113.6652119571781	1237.668984257377	1192.8457779428693	1223.3053905730908	1747.5307854033506	1045.5856567529922	986.7877248860792	958.7567747160381	1.0009568424696824	1.4901508104457126	1.1615721957083645	1.2909102880904766	1.2441589039056993	1.2759288099272164	1.8227050191336895	1.0905640349322911	1.029236768812761	1.0	9.905021056721143	-9.49909297654117	24.997787277244235	1.0297121538164022	1.3298263819445377	0.29633430702059804	0.20438671288813953	893.755041484541	939302.3904322907	0.11105965193467038	0.05284673192543196	3.168888974393255e-10	9.49909297654117	0.3001142281281355	
TLQPPES(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	TLQPPESPR	9	0	Q86UU1-3;Q86UU1-2;Q86UU1	Q86UU1-3	PHLDB1	Pleckstrin homology-like domain family B member 1	1	TLQPPES(1)PR;TLQPPES(1)PR;TLQPPES(1)PR;TLQPPES(1)PR	120.77	0.004559399999999999	227122000.0	12720.3	10969.6	14156.0	12940.199999999999	11728.900000000001	11972.900000000001	10471.9	12094.5	12004.8	13614.999999999998	True	False	12161.13084285716	12782.139948681017	11184.849053186115	11805.75275695659	13271.455933327748	14286.4934752171	12820.490144083893	11669.129579772141	11446.699468269784	11149.191567952563	1.0907634664573647	1.146463388917115	1.0031982126252137	1.058888681300558	1.1903514126957384	1.2813927707801214	1.1499031177233818	1.0466345930689807	1.026684257643611	1.0	13.444651483130913	-9.391747650347938	4.059471300854523	1.0196962306599355	1.1321816972247138	0.3281836656827608	0.07102191417995907	0.3333805253814199	9.225627229662589	0.049316799979210166	0.02169492596134276	4.0574422730631235e-10	9.391747650347938	0.11248546656477831	
TLQPPES(ph)PRLGR	ddPTM_K562_Methotrexat_30min_R1	2	TLQPPESPRLGR	12	1	Q86UU1-3;Q86UU1-2;Q86UU1	Q86UU1-3	PHLDB1	Pleckstrin homology-like domain family B member 1	1	TLQPPES(1)PRLGR;TLQPPES(1)PRLGR	113.07	0.0030268	60147000.0	5715.9	5471.3	7430.3	7618.9	5272.1	5100.3	5574.4	6178.2	5979.299999999999	6811.4	True	False	5464.635880025409	6375.339328801269	5870.781571057412	6950.962866105356	5965.473558995071	6085.860791591823	6824.601100008719	5960.909204162901	5701.323648092895	5577.789456184507	0.979713544756761	1.1429867295784104	1.0525283568292532	1.246185952465149	1.0695049725085464	1.091088295712557	1.2235314999998397	1.0686866635945895	1.0221475179152588	1.0	12.445477762905824	-9.617735387332221	3.9149989231580915	1.011812163082297	1.1177670431091564	0.23454198739139254	0.07432965275456009	0.3219069794082848	9.045385955888516	0.05582380170934259	0.01874135806934073	2.411374215054291e-10	9.617735387332221	0.10595488002685949	
TLQTDSIDS(ph)FETQRTPR	ddPTM_K562_Methotrexat_30min_R1	1	TLQTDSIDSFETQRTPR	17	1	A0A3B3IS71;P06400	A0A3B3IS71	RB1	Retinoblastoma-associated protein	1	TLQTDS(0.001)IDS(0.492)FET(0.472)QRT(0.036)PR	154.74	1.1422e-10	44036000.0	1306.9	1291.1	1446.7	1124.9	1209.4	1354.3	1219.1	1752.2	1943.4	1738.4	True	False	1249.4502408378753	1504.4323300523301	1143.057440325258	1026.2817635199206	1368.4572982774669	1615.9993078942045	1492.5142079902105	1690.5741328435868	1853.051758183019	1423.5589145595843	0.8776947887853492	1.056810726037121	0.8029575935597251	0.7209267934214215	0.9612930552304085	1.1351825986029926	1.0484386650425068	1.187568786618579	1.3017035959880239	1.0	10.475286485493676	-8.158055533175311	3.4780311855051145	1.1424740435459884	0.8710680910845813	0.5761603937110772	0.10939671835447631	0.19269565162146346	4.351467310640952	0.039950731595304455	0.039777812906759864	6.949354506072971e-09	8.158055533175311	-0.2714059524614071	
TLQTDSIDSFETQRT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	TLQTDSIDSFETQRTPR	17	1	A0A3B3IS71;P06400	A0A3B3IS71	RB1	Retinoblastoma-associated protein	1	TLQTDSIDSFET(0.008)QRT(0.992)PR;TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFET(0.004)QRT(0.996)PR	191.47	9.2232e-11	374015000.0	10079.1	7767.200000000001	8522.5	8860.9	8310.4	6785.4	6888.6	10868.6	10405.199999999999	11361.999999999998	True	False	9636.03483237357	9050.597780173857	6733.743716853534	8084.0786544347575	9403.363264102083	8096.582517747421	8433.543903831805	10486.345177618883	9921.464523127477	9304.23169996893	1.035661529409865	0.972739939419617	0.7237291518520568	0.8688604191210922	1.010654459962931	0.8702043090537457	0.906420237133601	1.127051165079423	1.066338935127831	1.0	13.183671308841445	-9.249515875838279	24.27036244888762	1.0725212846783405	0.9081153123887464	0.3868827196264283	0.08729779359196638	493.33170769981893	1004183.0792561936	0.043589720728513574	0.024895722749925155	5.629685374394201e-10	9.249515875838279	-0.16440597228959408	
TLS(ph)NAEDYLDDEDS(ph)D	ddPTM_K562_Methotrexat_30min_R1	1	TLSNAEDYLDDEDSD	15	0	Q92882	Q92882	OSTF1	Osteoclast-stimulating factor 1	2	T(0.111)LS(0.885)NAEDY(0.005)LDDEDS(1)D	111.62	0.0024925999999999998	4182500.0	938.54	886.45	1361.2	892.33	733.56	640.56	707.29	738.32	878.57	1179.7	True	False	897.2829053760646	1032.9207954262947	1075.5027218986245	814.1008143317009	830.0359977876784	764.3391542972098	865.9177870309212	712.3528671162398	837.725472464163	966.0448984732757	0.9288211208341541	1.0692264894299517	1.1133051099367477	0.8427152978275594	0.8592105802737079	0.7912045863553144	0.8963535632757919	0.7373910552625791	0.867170329027246	1.0	9.915946431940803	-7.2748511270267375	24.689575534509956	0.8444289884827122	1.0403284620660502	0.5278053954148444	0.07779565375854014	436.24522848788416	803079.065469939	0.02094444234640358	0.03126331709118444	5.310664587320038e-08	7.2748511270267375	0.19589947358333804	
TLS(ph)PEFNER	ddPTM_K562_Methotrexat_30min_R1	1	TLSPEFNER	9	0	Q9BSJ8;Q9BSJ8-2	Q9BSJ8	ESYT1	Extended synaptotagmin-1	1	T(0.198)LS(0.802)PEFNER	133.89	0.00057402	38534000.0	2518.5	1962.7	2753.0	2441.8	2014.1	2074.1	1669.9	2371.7	2552.7	2468.7	True	False	2407.789755566751	2287.002814804207	2175.1829219709907	2227.731185139072	2278.9894530020224	2474.8904707253696	2044.4175833999263	2288.2859667076436	2434.0255341740212	2021.5945078078948	1.1910349707952188	1.1312866185435506	1.0759738976188844	1.1019673710702254	1.1273227366813696	1.224226946188632	1.011289640679119	1.1319213412332298	1.2040127358741906	1.0	10.981277934602982	-13.226546298031625	2.511379236051329	0.5201630439087755	1.1294440386177529	0.3060654436142778	0.059938511088597046	1957885.3159044923	2136444.3814680194	5726648.778401257	0.014989292689827448	5.935450698529034e-14	13.226546298031625	0.6092809947089773	
TLS(ph)PEFNERFEWELPLDEAQR	ddPTM_K562_Methotrexat_30min_R1	2	TLSPEFNERFEWELPLDEAQR	21	1	Q9BSJ8;Q9BSJ8-2	Q9BSJ8	ESYT1	Extended synaptotagmin-1	1	T(0.039)LS(0.961)PEFNERFEWELPLDEAQR;T(0.19)LS(0.81)PEFNERFEWELPLDEAQR	93.75299999999999	0.00028921	28603000.0	1159.54	925.46	920.62	1567.98	993.06	626.29	968.15	1369.26	1248.51	1594.4899999999998	True	False	1108.568009993993	1078.3765348696688	727.3944430166852	1430.5176278459985	1123.664796285284	747.3116787573362	1185.2822823933402	1321.1023496960443	1190.467042610415	1305.7124100759954	0.8490139187154327	0.8258913115537478	0.5570862598865467	1.0955840021178471	0.8605760254816633	0.5723401822563982	0.9077667281452537	1.011786622767224	0.9117375567726489	1.0	10.350621455477322	-8.989528581102283	24.997577794027908	0.9690126370138322	0.7958633124975241	0.2441400669428626	0.14518754444595525	318.32286565774916	759904.8172703115	0.061823945763946966	0.04163527063931352	1.0244043616106328e-09	8.989528581102283	-0.17314932451630816	
TLSDFNSLIS(ph)SPHLGR	ddPTM_K562_Methotrexat_30min_R1	1	TLSDFNSLISSPHLGR	16	0	Q9NRJ4	Q9NRJ4	TULP4	Tubby-related protein 4	1	TLSDFNSLIS(0.638)S(0.362)PHLGR	102.47	0.0011917	4157600.0	658.62	646.65	755.84	553.36	560.51	620.09	450.06	942.49	754.92	1140.6	True	False	629.6678534093205	753.4979213293624	597.1995131647489	504.8477879468243	634.2268895795459	739.9136165045534	550.9974115725317	909.3420924915823	719.8239339752625	934.026287360022	0.6741436102286209	0.806720251374387	0.6393819116726394	0.540507044372114	0.6790246678946864	0.7921764371277833	0.5899163856832103	0.9735722696432791	0.7706677464183673	1.0	9.867319343682102	-9.576270560267053	0.9375159064946109	0.9758636975962264	0.670890548239243	0.4864221577401189	0.1039343080104858	0.45358456482370574	0.7742783404353721	0.09580793650648299	0.0356314101305629	2.6529522895036457e-10	9.576270560267053	-0.3049731493569834	
TLSDVEDQKELAS(ph)PVSPELR	ddPTM_K562_Methotrexat_30min_R1	1	TLSDVEDQKELASPVSPELR	20	1	Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5	Q5T4S7-3	UBR4	E3 ubiquitin-protein ligase UBR4	1	TLSDVEDQKELAS(0.956)PVS(0.043)PELR	67.55199999999999	0.011479000000000001	30339000.0	1201.6	934.34	1649.8	1388.1	760.32	801.13	635.66	848.29	929.69	1508.2	True	False	1148.7791027552144	1088.723803935478	1303.5295258509773	1266.4074281642816	860.3154068350619	955.9370342858186	778.2229361422826	818.4551598846512	886.4689148220502	1235.0503652431917	0.9301475754221652	0.8815217861346887	1.0554464518491937	1.0253892989335018	0.6965832576922146	0.7740065192382553	0.6301143322110949	0.6626897031227472	0.7177593236430461	1.0	10.270354160646127	-7.764826352639493	24.997883962239833	0.7255134725860959	0.9724631284657418	0.5188951524782845	0.1055403823165192	63.70363508101811	470171.0322038742	0.03145956903860345	0.03713232037239526	1.718595409248052e-08	7.764826352639493	0.2469496558796459	
TLSDVEDQKELASPVS(ph)PELR	ddPTM_K562_Methotrexat_30min_R1	3	TLSDVEDQKELASPVSPELR	20	1	Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5	Q5T4S7-3	UBR4	E3 ubiquitin-protein ligase UBR4	1	TLSDVEDQKELAS(0.013)PVS(0.987)PELR;TLSDVEDQKELAS(0.004)PVS(0.996)PELR;TLSDVEDQKELAS(0.108)PVS(0.892)PELR	86.617	0.0016772000000000002	356996000.0	7461.099999999999	4867.9	10822.8	7858.4	5039.6	5076.67	5083.6	6450.8	6918.400000000001	9432.1	True	False	7133.11897766889	5672.237734847607	8551.242182312986	7169.466272953097	5702.395733751547	6057.664628521943	6223.726706372758	6223.921707651757	6596.765094068849	7723.855291082295	0.9235179465240048	0.7343790789810087	1.1071209726295579	0.9282237953410033	0.7382836056412583	0.7842799224262941	0.805779817438898	0.805805064064016	0.8540767331160715	1.0	12.915105419847384	-7.7301570898845675	24.618728828465375	0.8180269986262265	0.9229447788383305	0.1467752210333596	0.10569631128770922	294.5929990814083	231839.13289818374	0.03088967353317351	0.03987397117165721	1.861413717661028e-08	7.7301570898845675	0.10491778021210396	
TLSEVDY(ph)APAGPAR	ddPTM_K562_Methotrexat_30min_R1	5	TLSEVDYAPAGPAR	14	0	O15357;O15357-2;H0YFZ4;A0A0A0MTP6	O15357;A0A0A0MTP6	INPPL1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	TLSEVDY(1)APAGPAR;TLSEVDY(1)APAGPAR;TLSEVDY(1)APAGPAR;TLSEVDY(1)APAGPAR;TLSEVDY(1)APAGPAR	295.79	5.646899999999998e-190	503242000.0	5940.900000000001	4940.84	6095.839999999999	6502.56	4583.9800000000005	4642.1900000000005	4870.03	4672.67	6319.4800000000005	5421.12	True	False	5679.745149432802	5757.22983007959	4816.406488582508	5932.490660675697	5186.853717676486	5539.227517620462	5962.258197308307	4508.32954760543	6025.688754143472	4439.302636273155	1.2794228316456955	1.296877077727877	1.084946642120785	1.3363564385545226	1.1683938092652562	1.2477697448153042	1.3430618918816695	1.0155490438449188	1.3573502975237808	1.0	12.116117348127476	-14.701439504843158	0.36740074911364984	1.2616215513624419e-10	1.2387030924630844	0.29146824726843157	0.1092222983420708	226.043057508271	4.48186274092223	174.27200048350664	0.07348427570067204	1.988659801961504e-15	14.701439504843158	1.2387030923369222	
TLSNAEDYLDDEDS(ph)D	ddPTM_K562_Methotrexat_30min_R1	4	TLSNAEDYLDDEDSD	15	0	Q92882	Q92882	OSTF1	Osteoclast-stimulating factor 1	1	TLSNAEDYLDDEDS(1)D;TLSNAEDYLDDEDS(1)D;TLSNAEDYLDDEDS(1)D;TLSNAEDYLDDEDS(1)D	259.27	1.6668e-90	112797000.0	14348.9	13743.9	18839.9	17596.8	14203.900000000001	13638.9	13687.2	16111.900000000001	15836.3	17991.5	True	False	13718.139536887744	16014.84586864397	14885.66245246686	16054.11586479449	16071.961814952301	16274.424396690729	16756.903016654585	15545.235344688137	15100.073869565571	14733.065008800479	0.9311124011665942	1.0870002853498473	1.0103574811877387	1.0896657182470117	1.0908770038924054	1.1046190583540867	1.1373670724078941	1.055125687384297	1.024910557344712	1.0	13.846769973739255	-6.257505084462495	24.48693113102444	1.0714931458593324	0.9311123278053972	0.4802197782825305	0.04203548503830946	253.31745201407534	1576554.7336148168	0.010634031035601782	0.07799208862107622	5.527069371411899e-07	6.257505084462495	-0.1403808180539352	
TLSS(ph)PSNRPSGETSVPPPPAVGR	ddPTM_K562_Methotrexat_30min_R1	2	TLSSPSNRPSGETSVPPPPAVGR	23	1	Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3	Q8WWM7-6	ATXN2L	Ataxin-2-like protein	1	T(0.004)LS(0.068)S(0.265)PS(0.05)NRPS(0.178)GET(0.18)S(0.257)VPPPPAVGR;T(0.112)LS(0.216)S(0.412)PS(0.188)NRPS(0.057)GET(0.008)S(0.008)VPPPPAVGR	79.36	0.0010520999999999998	329476000.0	1457.83	1327.1299999999999	1890.73	1756.58	1344.5500000000002	1212.83	1164.15	1325.1100000000001	1462.1599999999999	1509.79	True	False	1393.7455387563539	1546.4156751470443	1493.8916113542368	1602.5833586663894	1521.381892177087	1447.1922325875564	1425.2402717019133	1278.5051302205025	1394.1845007434822	1236.3524008357767	1.1273044302046722	1.250788750927053	1.208305666203554	1.2962189077992972	1.2305406542249844	1.1705337665937734	1.1527783427592715	1.03409442919044	1.1276594762148806	1.0	10.271874301751462	-8.943842593134246	1.4248783452758662	1.0524708564940524	1.2265012798121584	0.6634800904125366	0.05117995529492744	0.2558301752073913	1.0144614273103338	0.0339594828733229	0.016917180933846268	1.1380396852625487e-09	8.943842593134246	0.17403042331810603	
TLSS(ph)SSMDLSR	ddPTM_K562_Methotrexat_30min_R1	1	TLSSSSMDLSR	11	0	Q9H0B6;Q9H0B6-2	Q9H0B6	KLC2	Kinesin light chain 2	1	TLS(0.005)S(0.833)S(0.149)S(0.013)MDLSR	122.18	0.0024248	11903000.0	1698.2	1483.0	1540.0	1768.3	1045.5	1331.8	1587.0	1848.6	1943.3	1943.5	True	False	1623.5491613672648	1728.0405433100511	1216.775045345197	1613.2758844628622	1183.0015754498856	1589.1515013316844	1942.9251481260465	1783.5836902035458	1852.9564071611926	1591.5133170999495	1.0201291713510074	1.0857845327105908	0.7645396568609307	1.0136741346296545	0.7433186783542266	0.9985159937130976	1.220803575597117	1.120684113063902	1.164273265735309	1.0	10.636183513538953	-8.565737709313556	7.054093423590175	1.1341117969972803	0.9245268293430482	0.411648432155478	0.1132131698464766	0.19658627779782906	25.16561222807723	0.042847650106130085	0.033253664206263134	2.7180803486789635e-09	8.565737709313556	-0.20958496765423207	
TLSSPS(ph)NRPSGETSVPPPPAVGR	ddPTM_K562_Methotrexat_30min_R1	1	TLSSPSNRPSGETSVPPPPAVGR	23	1	Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3	Q8WWM7-6	ATXN2L	Ataxin-2-like protein	1	T(0.007)LS(0.042)S(0.171)PS(0.719)NRPS(0.028)GET(0.004)S(0.03)VPPPPAVGR	90.896	0.00015048	350580000.0	761.16	763.83	921.11	760.38	693.33	700.81	593.82	786.92	821.56	791.45	True	False	727.7003177872501	890.0399246099234	727.7815987129316	693.7186659661102	784.5150476390909	836.2316140923999	726.9992510776361	759.2435775694983	783.365854920676	648.110735692696	1.1228024436433526	1.3732837238973603	1.1229278557391644	1.0703705829292716	1.210464515451371	1.2902603953916019	1.1217207354243632	1.171471996614937	1.20869137290778	1.0	9.340096521689988	-14.69591312975711	0.4224165317278291	1.8111620891019343e-12	1.1926183025454349	0.30213212957535607	0.08540448596026551	367.3263484887618	7.215269270601975	329.6168960208637	0.05096874660881869	2.0141270876112215e-15	14.69591312975711	1.1926183025436237	
TLSSS(ph)SMDLSR	ddPTM_K562_Methotrexat_30min_R1	1	TLSSSSMDLSR	11	0	Q9H0B6;Q9H0B6-2	Q9H0B6	KLC2	Kinesin light chain 2	1	TLS(0.003)S(0.076)S(0.874)S(0.047)MDLSR	125.36	0.0017760000000000002	10641000.0	1609.6	1498.1	1659.4	1526.5	1237.1	1138.7	1439.7	1397.7	1392.4	1815.7	True	False	1538.843911280621	1745.6355616539367	1311.1146170427407	1392.6741150441437	1399.8003338011042	1358.7376592329092	1762.58937350792	1348.542098776099	1327.6676279170706	1486.8591355072688	1.0349628115615785	1.1740423285346273	0.8818015007154194	0.9366550480715229	0.9414478482681126	0.9138307905471834	1.185444761656309	0.9069736779846462	0.8929343716640062	1.0	10.538052258124036	-6.759522140645982	24.999983714312368	0.9593434330051186	1.104502569339298	0.3058656425215146	0.08861054733581976	60.0322269547406	782736.0998577912	0.023187006837698438	0.05529811343215864	1.7397140039025366e-07	6.759522140645982	0.14515913633417943	
TLSVAAAFNEDEDS(ph)EPEEMPPEAK	ddPTM_K562_Methotrexat_30min_R1	4	TLSVAAAFNEDEDSEPEEMPPEAK	24	0	Q8WW12	Q8WW12	PCNP	PEST proteolytic signal-containing nuclear protein	1	TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK;TLSVAAAFNEDEDS(1)EPEEMPPEAK	107.75	2.3505e-06	46007100.0	19268.1	14032.7	26653.8	21479.8	14343.0	13192.48	12606.16	17588.4	17156.1	22391.9	True	False	18421.09739497151	16351.36515988332	21059.53162572844	19596.69928354091	16229.355903087251	15741.740049773412	15433.412278072245	16969.806002799985	16358.516655636351	18336.509928052656	1.004613062532115	0.8917381346854724	1.1485027253474167	1.0687256931898648	0.8850842372276246	0.858491616536604	0.8416766515890235	0.925465427684154	0.8921281486947409	1.0	14.162431449854385	-7.7705910189930245	24.999447362078417	0.8917085736969782	1.0272128375650855	0.42821994767062754	0.07198325158466419	184.8464084184081	504941.74272679316	0.0229790273325558	0.0264158910409263	1.6959341328721198e-08	7.7705910189930245	0.13550426386810732	
TLTAEEAEEEWERR	ddPTM_K562_Methotrexat_30min_R1	2	TLTAEEAEEEWERR	14	1	P35269;M0R0R9	P35269	GTF2F1	General transcription factor IIF subunit 1	0	;	184.34	2.6164000000000002e-08	15659600.0	3263.3999999999996	2893.7	3969.8999999999996	3429.5	3058.4	3157.9	3167.8	3598.2	3482.5	3994.6000000000004	False	True	3119.9448434848255	3371.834740509977	3136.6722418934414	3128.8410596422473	3460.6332074183924	3768.1194819457314	3878.259788427023	3471.6492665208257	3320.5993351200805	3271.13923153458	0.95377928686367	1.0307830091745003	0.95889291768909	0.956498894782422	1.0579290462653024	1.151928797655612	1.185599118203118	1.061296698426432	1.0151201462501789	1.0	11.675577451716396	-7.904146091504014	4.733201379424035	1.0942191362993265	0.9784402676485504	0.4412621908697907	0.05678523485772346	0.1965341619502118	7.558565068557497	0.01884315514249281	0.02150649514940714	1.246963979815626e-08	7.904146091504014	-0.11577886865077613	
TLTDEVNS(ph)PDS(ph)DRR	ddPTM_K562_Methotrexat_30min_R1	2	TLTDEVNSPDSDRR	14	1	F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2	F8VXC8	SMARCC2	SWI/SNF complex subunit SMARCC2	2	TLTDEVNS(1)PDS(1)DRR;T(0.015)LTDEVNS(0.985)PDS(1)DRR	132.65	3.4963e-09	5508500.0	2914.8	2387.5	3437.2	2523.7	2358.1000000000004	2569.7	2259.79	2842.8999999999996	2889.4	3415.5	True	False	2786.668882082973	2781.993794438804	2715.778692117215	2302.4511392970253	2668.231482609637	3066.258156609123	2766.6054319368345	2742.91359562894	2755.072424665027	2796.919853128313	0.9963349071179589	0.9946633942074476	0.9709891004133197	0.8232095520083523	0.9539892534372266	1.096298184297115	0.9891614980824093	0.9806908097709816	0.985038030883695	1.0	11.449623198057534	-8.029254393471941	24.993427335228684	1.0096503011422138	0.943652627334862	0.24472881171086092	0.05486030359058571	1083.7422196409832	925890.1239200649	0.01939154915773868	0.019425571659669554	9.348579089184704e-09	8.029254393471941	-0.06599767380735178	
TLTDEVNS(ph)PDSDRR	ddPTM_K562_Methotrexat_30min_R1	1	TLTDEVNSPDSDRR	14	1	F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2	F8VXC8	SMARCC2	SWI/SNF complex subunit SMARCC2	1	TLTDEVNS(0.757)PDS(0.243)DRR	131.96	0.00028711	135050000.0	4814.4	3966.0	5510.3	4733.7	5002.4	3970.0	4120.0	4504.7	5334.0	5239.5	True	False	4602.764740599789	4621.31408952641	4353.763332704962	4318.703870543379	5660.303281712583	4737.14631347559	5044.014877302651	4346.267147711732	5086.023504244221	4290.575778206936	1.072761554283355	1.0770848315975186	1.0147270571047768	1.0065557850019369	1.3192409537346679	1.1040817266383953	1.175603261203927	1.0129799291245871	1.1853941678591466	1.0	12.066955549315775														
TLTDEVNSPDS(ph)DRR	ddPTM_K562_Methotrexat_30min_R1	3	TLTDEVNSPDSDRR	14	1	F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2	F8VXC8	SMARCC2	SWI/SNF complex subunit SMARCC2	1	TLTDEVNS(0.026)PDS(0.974)DRR;TLTDEVNS(0.205)PDS(0.795)DRR;TLTDEVNS(0.008)PDS(0.992)DRR	250.46	5.8233e-75	308984000.0	11606.900000000001	9817.5	13880.4	12292.6	11309.2	10342.6	10231.7	11968.1	12504.3	12485.2	True	False	11096.674573709637	11439.67500603265	10967.093726889265	11214.926843492723	12796.5580268559	12341.16107348932	12526.419179635323	11547.17513941635	11922.977822294906	10224.0092959384	1.0853545074648858	1.1189030325488052	1.0726803360053734	1.096920642271714	1.251618387313035	1.2070764722790288	1.2251963801139716	1.1294175117782406	1.1661743917849763	1.0	13.319673432683901	-7.615796821494388	14.337690618917144	1.1750001796126885	1.0932777658115276	0.2005239845211949	0.06583567360901581	1.1651598275731712	174.83973202834085	0.018688919247440275	0.024127016284961608	2.42216195577986e-08	7.615796821494388	-0.08172241380116096	
TLVHS(ph)SSDGHIDPQHAAGK	ddPTM_K562_Methotrexat_30min_R1	3	TLVHSSSDGHIDPQHAAGK	19	0	F6SS63;Q8N5C8-2;Q8N5C8	F6SS63	TAB3	TGF-beta-activated kinase 1 and MAP3K7-binding protein 3	1	T(0.018)LVHS(0.462)S(0.462)S(0.057)DGHIDPQHAAGK;T(0.016)LVHS(0.328)S(0.328)S(0.328)DGHIDPQHAAGK;T(0.012)LVHS(0.372)S(0.372)S(0.244)DGHIDPQHAAGK	112.32	0.00029686	32766300.0	8908.0	6472.9	12384.399999999998	9494.6	7109.3	6599.6	6616.0	8866.199999999999	8849.5	10842.9	True	False	8516.414986138027	7542.436704512228	9785.083682839642	8662.223159317484	8044.297561306428	7874.879297333376	8099.806414619993	8554.370720590003	8438.08867656717	8879.145740150774	0.959148012136741	0.8494552207208339	1.1020298539072617	0.9755694312063846	0.9059765203459573	0.8868960514662816	0.9122281187472042	0.9634227177855449	0.950326633159181	1.0	13.116205166673012	-10.318540299602757	1.65742236539805	0.9998243346898466	0.9430777115375764	0.06313883192793068	0.06419291173899762	4.295481208504801	17.535424372339445	0.06388889898304222	0.018217158978673917	4.802415149940909e-11	10.318540299602757	-0.05674662315227019	
TLVHSSS(ph)DGHIDPQHAAGK	ddPTM_K562_Methotrexat_30min_R1	1	TLVHSSSDGHIDPQHAAGK	19	0	F6SS63;Q8N5C8-2;Q8N5C8	F6SS63	TAB3	TGF-beta-activated kinase 1 and MAP3K7-binding protein 3	1	T(0.024)LVHS(0.208)S(0.208)S(0.56)DGHIDPQHAAGK	76.678	0.007215999999999999	5551500.0	3123.6	2892.3	4695.5	3621.2	2783.3	2226.1	2322.7	3369.5	3293.3	4026.5	True	False	2986.2902840930356	3370.2034143059095	3709.9787178041383	3303.7350182757	3149.3527354850944	2656.2623195032766	2843.624600852154	3250.9927751492187	3140.1952018236775	3297.26183241726	0.9056879422595786	1.0221218652311803	1.125169582023855	1.0019632004334016	0.9551418405787533	0.8055964174237084	0.8624200155701498	0.9859674300617731	0.952364525907718	1.0	11.687052739256487	-7.832503556707486	3.683429970631316	0.9139481474459149	1.0233694237890678	0.25419279627827795	0.07304574024894805	0.29638890134065793	7.977237705130741	0.024673786302782334	0.029119898087304325	1.4706063716454811e-08	7.832503556707486	0.1094212763431529	
TLVITSTPAS(ph)PNR	ddPTM_K562_Methotrexat_30min_R1	1	TLVITSTPASPNR	13	0	E9PK89;Q8TBN0	E9PK89	RAB3IL1	Guanine nucleotide exchange factor for Rab-3A	1	TLVITSTPAS(1)PNR	162.48	3.9338e-05	18093000.0	1795.3	1676.2	2046.3	1644.8	1505.7	1728.1	1680.2	1849.4	2086.8	2035.6	True	False	1716.380761631523	1953.1635594715501	1616.809594344076	1500.6029377167429	1703.725941802862	2062.030867586186	2057.027620593183	1784.3555537501002	1989.7851234827237	1666.9331146327022	1.0296638458764533	1.1717108157047542	0.9699306949699235	0.9002178459016281	1.0220721676515898	1.2370207595525158	1.234019291197797	1.0704422019615774	1.1936802418861059	1.0	10.702980502289591	-8.231359478975543	20.31533288759864	1.156871694153365	1.017924417752597	0.3216668997479074	0.09261360131286621	84.20285270591988	56867.9354748896	0.031677523257850934	0.03166330509164594	5.8700327062171584e-09	8.231359478975543	-0.13894727640076798	
TLVITSTPAS(ph)PNRELHPQLLS(ph)PTK	ddPTM_K562_Methotrexat_30min_R1	2	TLVITSTPASPNRELHPQLLSPTK	24	1	E9PK89;Q8TBN0	E9PK89	RAB3IL1	Guanine nucleotide exchange factor for Rab-3A	2	T(0.02)LVIT(0.112)S(0.112)T(0.121)PAS(0.634)PNRELHPQLLS(0.982)PT(0.017)K;T(0.014)LVIT(0.209)S(0.209)T(0.249)PAS(0.325)PNRELHPQLLS(0.974)PT(0.02)K	58.776	0.012518000000000001	32586000.0	5141.3	3620.8	6606.5	5404.3	4097.6	3644.1000000000004	3454.7999999999997	4548.9	4853.5	6406.0	True	False	4915.294608018798	4219.075656923153	5219.885933164317	4930.513409717048	4636.506222442327	4348.270750865589	4229.626844200291	4388.912608658938	4627.861844366207	5245.811324590827	0.9369941661792783	0.804275143702817	0.9950578871746723	0.9398953001996554	0.8838492152220084	0.828903382491507	0.8062864984055067	0.8366508700160451	0.882201352281228	1.0	12.356950203974439	-7.988523437149426	6.747115555316415	0.8564631813073004	0.9159713089993539	0.0852922155177267	0.06684536484986972	0.2913006216696283	63.118515146288885	0.020833709294268362	0.022977682577634245	1.0267780190386074e-08	7.988523437149426	0.05950812769205349	
TLVITSTPAS(ph)PNRELHPQLLSPTK	ddPTM_K562_Methotrexat_30min_R1	1	TLVITSTPASPNRELHPQLLSPTK	24	1	E9PK89;Q8TBN0	E9PK89	RAB3IL1	Guanine nucleotide exchange factor for Rab-3A	1	T(0.01)LVIT(0.105)S(0.105)T(0.089)PAS(0.691)PNRELHPQLLSPTK	57.802	0.0095874	25561000.0	2335.5	2459.4	3593.5	3101.9	1880.2	2138.0	1993.4	2719.8	2634.7	3940.7	True	False	2232.83421644874	2865.7740473477693	2839.2734580830943	2829.9612430104366	2127.4792560123137	2551.138241362922	2440.4706933046373	2624.143092402684	2512.213372072039	3227.0010438362588	0.6919223719228633	0.8880610847094543	0.8798489431871289	0.8769632251640609	0.6592744244926448	0.7905600917718109	0.7562658518397645	0.8131832177169372	0.7784978492245914	1.0	11.655978329154792	-12.20609615069208	4.070708401515137	1.0001191082952638	0.7961143534847599	0.4174886516767432	0.0733510725200489	20586359.486962523	20576221.059497297	18575.152443049665	0.018277025358041557	6.221625261541668e-13	12.20609615069208	-0.20400475481050395	
TLVITSTPASPNRELHPQLLS(ph)PTK	ddPTM_K562_Methotrexat_30min_R1	1	TLVITSTPASPNRELHPQLLSPTK	24	1	E9PK89;Q8TBN0	E9PK89	RAB3IL1	Guanine nucleotide exchange factor for Rab-3A	1	TLVITSTPASPNRELHPQLLS(0.702)PT(0.297)K	72.566	0.0010917	6381700.0	2216.8	1833.7	3490.2	2697.0	1873.0	2042.3	1704.7	2260.0	2028.7	3176.5	True	False	2119.352126321372	2136.687757429293	2757.6547164050703	2460.558197362632	2119.332329811224	2436.9455707836764	2087.0223692567547	2180.514519019805	1934.3861798013222	2601.2050690856654	0.8147578026465762	0.821422264174023	1.0601450647543131	0.945930110088371	0.8147501921315947	0.9368525379816645	0.8023290412817594	0.838270901796399	0.7436500116006876	1.0	11.344964425000544	-8.764242892976855	24.991779239314535	0.832585064321055	0.9010827973791787	0.06436761431313809	0.09312768360291503	178.58284535077598	1591935.251993825	0.03815932208627131	0.02702877128970627	1.7209058345667494e-09	8.764242892976855	0.06849773305812379	
TLYSFFS(ph)PSPAR	ddPTM_K562_Methotrexat_30min_R1	1	TLYSFFSPSPAR	12	0	P13051	P13051	UNG	Uracil-DNA glycosylase	1	TLYS(0.001)FFS(0.998)PS(0.001)PAR	113.54	0.0012997999999999998	6736000.0	549.64	572.75	916.7	753.68	573.08	510.41	574.58	715.14	489.68	665.97	True	False	525.4784837203529	667.3872024145865	724.2971974467156	687.6060445636888	648.4500649056155	609.0395087811274	703.4441913108152	689.9881208547895	466.91488368172327	545.3563796187568	0.9635506310345172	1.2237634459894609	1.3281172175028946	1.260837995595421	1.1890391111935439	1.1167734192582284	1.289879824643425	1.2652059215611278	0.8561647046434667	1.0	9.091055500544217	-9.759300348742384	24.99999986566235	0.9280822868245142	1.2106638048568248	0.5342718376316036	0.10316331713076346	40.25014206754333	470471.8695963499	0.0787869791351498	0.026455612834821795	1.7406026935829792e-10	9.759300348742384	0.2825815180323106	
TMLLLSRS(ph)PEAQPK	ddPTM_K562_Methotrexat_30min_R1	2	TMLLLSRSPEAQPK	14	1	P55265-5;P55265;P55265-4	P55265-5	ADAR	Double-stranded RNA-specific adenosine deaminase	1	T(0.001)MLLLS(0.044)RS(0.955)PEAQPK;TMLLLSRS(1)PEAQPK	172.26	0.00026608	86967900.0	6818.7	5170.0	9136.5	7904.6	5034.3	4193.5	4678.5	5584.799999999999	6112.8	7703.099999999999	True	False	6518.958112480849	6024.254625025602	7218.873507659997	7211.615990683227	5696.398690853527	5003.834525329944	5727.772719286518	5388.379418505223	5828.61726223174	6307.993945434846	1.0334439393681853	0.9550190880232868	1.1444008301378226	1.1432503031969998	0.9030444131887704	0.793252905537626	0.9080181066806128	0.8542144246040128	0.9240048916739948	1.0	12.622965560057581	-7.8409720195918755	7.28953746266973	0.8838522013871698	1.0658621803979063	0.5812482147461806	0.07103375783198687	0.16051815496282779	12.396116620210663	0.022669529592536788	0.025814889479688304	1.4422082660740036e-08	7.8409720195918755	0.18200997901073646	
TMPNSS(ph)TPTSQINTIDSR	ddPTM_K562_Methotrexat_30min_R1	1	TMPNSSTPTSQINTIDSR	18	0	Q92547	Q92547	TOPBP1	DNA topoisomerase 2-binding protein 1	1	T(0.001)MPNS(0.124)S(0.416)T(0.416)PT(0.033)S(0.011)QINTIDSR	119.21	0.00018107	42007000.0	2810.3	2293.9	3017.9	2960.5	2166.3	2027.7	2065.5	2338.4	2499.5	3192.7	True	False	2686.762576958206	2672.9279853667726	2384.484032043681	2700.957561472775	2451.2064207528338	2419.5243274142204	2528.740953657433	2256.1571465822617	2383.298790562136	2614.4710921044534	1.0276505198592818	1.022358974799475	0.9120330453240353	1.0330799103610309	0.9375534608721935	0.9254354866347688	0.9672093760355888	0.8629497390105867	0.9115797064115784	1.0	11.35230340322775	-6.450810605300003	0.5096530906112514	0.9242152808676916	1.0879294776923543	0.2921582455605912	0.04700978823244293	4.345426074920387	0.9967471059988392	0.029606194166773677	0.41712259261858675	3.5415175207472645e-07	6.450810605300003	0.1637141968246627	
TMPNSSTPT(ph)SQINTIDSR	ddPTM_K562_Methotrexat_30min_R1	1	TMPNSSTPTSQINTIDSR	18	0	Q92547	Q92547	TOPBP1	DNA topoisomerase 2-binding protein 1	1	TMPNSS(0.129)T(0.017)PT(0.427)S(0.427)QINTIDSR	175.19	3.1330000000000005e-10	34247000.0	3298.6	2408.6	3577.6	2875.0	2834.5	2521.6	2614.9	3008.7	3109.3	3314.0	True	False	3153.5974936321186	2806.5802108001267	2826.710650796737	2622.953213725459	3207.2864329150652	3008.8635123576933	3201.357888994831	2902.882315652606	2964.749321662272	2713.802486683423	1.1620585908911063	1.0341873531961012	1.0416051516893186	0.9665232553202528	1.1818422485251445	1.1087260503010552	1.1796576592083738	1.069673393659632	1.0924705597442115	1.0	11.406100008421207	-6.2368402567479215	22.62772440002279	1.0803776535524399	1.1620589500657588	0.12909456790443463	0.06654042319683715	4614.015756346392	4244000.518956979	0.017208811747340107	0.9155884750290569	5.796418624997868e-07	6.2368402567479215	0.0816812965133189	
TMPPGSHSPS(ph)GAGQGRT(ph)AR	ddPTM_K562_Methotrexat_30min_R1	5	TMPPGSHSPSGAGQGRTAR	19	1	Q96PY0	Q96PY0	PSMG3-AS1	Putative uncharacterized protein PSMG3-AS1	2	TMPPGS(0.001)HS(0.001)PS(0.997)GAGQGRT(1)AR;TMPPGS(0.004)HS(0.002)PS(0.994)GAGQGRT(1)AR;T(0.003)MPPGS(0.006)HS(0.006)PS(0.984)GAGQGRT(1)AR;T(0.004)MPPGS(0.015)HS(0.023)PS(0.958)GAGQGRT(1)AR;T(0.002)MPPGS(0.041)HS(0.062)PS(0.895)GAGQGRT(1)AR	88.19	0.012922999999999999	565101000.0	341.851	284.707	573.19	354.306	152.51	156.38	201.86	228.44	281.34299999999996	169.79	True	False	326.8236393608297	331.7499925584457	452.88525210481424	323.24454307555226	172.56773818446874	186.59822178874364	247.13224347871684	220.40563571897542	268.263425338317	139.0393857012608	2.350583165427967	2.3860145158526644	3.25724433994466	2.3248415651812038	1.2411428410310064	1.3420529790721851	1.7774261748372773	1.5852028877093691	1.9294060023733577	1.0	7.119349802991183	-7.618564723505931	5.047635536919723	1.521151616864202	2.659953533710561	0.7196101952640448	0.34023205443638904	0.11361163377374259	4.752132393314107	0.1027599685635512	0.133908731461459	2.4067738074995003e-08	7.618564723505931	1.1388019168463588	
TMTSETGFHHVSQYGLDLLTS	ddPTM_K562_Methotrexat_30min_R1	2	TMTSETGFHHVSQYGLDLLTS	21	0	A0A087X069	A0A087X069	DDX52		0	;	101.56	0.00020669999999999998	16554300.0	1803.17	2637.2	2997.0	2432.6	2368.3	2667.3	2158.81	1468.57	1795.54	1830.4299999999998	False	True	1723.9048058547949	3072.952475264509	2367.970656428284	2219.3377348551503	2679.7729613945135	3182.7179752980965	2642.9780964246925	1416.9195607066001	1712.0657373098381	1498.9213897706509	1.1500968747390872	2.0501091626524186	1.579783084415525	1.4806231667657568	1.7878008677990405	2.1233388201799444	1.7632533063185476	0.9452927754426149	1.1421984828515925	1.0	10.549709008466955	-9.2589959937631	24.91096161857528	1.0328091921394076	1.7241027459170382	0.5769045186212678	0.2648687767160955	142.94180337549795	1457348.0502723788	0.1312634011969947	0.071185005902012	5.508127774653468e-10	9.2589959937631	0.6912935537776306	
TNATNNMNLS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TNATNNMNLSR	11	0	H0YJP0;A0A087X2H1;Q9ULT8	H0YJP0	HECTD1	E3 ubiquitin-protein ligase HECTD1	1	TNATNNMNLS(1)R	76.357	0.032451999999999995	3473300.0	3046.5	2813.0	2807.2	2950.1	2467.8	2355.2	2189.5	2825.6	3331.4	3175.6	True	False	2912.5795077761	3277.800437175437	2218.0070826578158	2691.469313325733	2792.3589554234622	2810.3090673797747	2680.5511101587767	2726.222046434674	3176.5239411397088	2600.468067806842	1.120021254570714	1.2604655591636766	0.852926098234468	1.0349941791808421	1.0737909032578337	1.0806935498154016	1.0307956261195217	1.0483582091180568	1.2215200718917865	1.0	11.344555607272394	-11.864566633179141	14.798217149290421	0.9999953676541739	1.0750800141744337	0.04752017314080603	0.10559345525166162	0.0	0.0	0.1027976080984346	0.024932082132393847	1.365945484556639e-12	11.864566633179141	0.07508464652025981	
TNLQPLESTQS(ph)QDF	ddPTM_K562_Methotrexat_30min_R1	2	TNLQPLESTQSQDF	14	0	Q9Y248	Q9Y248	GINS2	DNA replication complex GINS protein PSF2	1	TNLQPLESTQS(1)QDF;TNLQPLESTQS(1)QDF	151.07	2.7760000000000003e-09	16570900.0	9207.599999999999	7089.5	7515.1	9564.8	6769.4	6292.4	7001.700000000001	8156.6	8834.3	10779.5	True	False	8802.844928868937	8260.91937410425	5937.783209917984	8726.268834310013	7659.694753563324	7508.317245066447	8572.009457866498	7869.727754795112	8423.595321249488	8827.228094509335	0.9972377324592343	0.9358452376734961	0.6726667926040534	0.9885627448256241	0.8677349980712253	0.8505860689990247	0.9710873409058516	0.8915287642436924	0.9542741199232279	1.0	13.107744761933333	-9.89460144843597	0.7209805098651306	0.9993844353714927	0.8842417410191781	0.12572014649696095	0.08877352952252399	1.4683228937017545	1.7661470810233477	0.08689965777763567	0.034885485482650185	1.2746723097985992e-10	9.89460144843597	-0.11514269435231461	
TNRS(ph)RMPNLNDLK	ddPTM_K562_Methotrexat_30min_R1	1	TNRSRMPNLNDLK	13	2	A0A669KBC2;O76039	A0A669KBC2	CDKL5	Cyclin-dependent kinase-like 5	1	T(0.135)NRS(0.865)RMPNLNDLK	76.07300000000001	0.020277	0.0	2823.8	1913.0	3661.6	2808.5	1905.8	2099.7	1749.5	2461.4	2767.5	3099.6	True	False	2699.669133122649	2229.0907345597616	2893.0801987246596	2562.283165477551	2156.4461047273007	2505.43730841428	2141.869909670144	2374.8311668651986	2638.8395290580956	2538.2324042619002	1.0636020281632537	0.8782059242553738	1.1398011442399605	1.009475397593722	0.8495857594073936	0.9870795535536641	0.8438431035998787	0.9356240046725676	1.0396366875733158	1.0	11.30960845515155	-6.212239797233889	21.69581969500791	0.9629738813039729	1.0636044416824746	0.10299752461897127	0.0873167271977368	18233.811199501673	8039538.494103612	0.02205734895930568	12.101278922243694	6.134232078459987e-07	6.212239797233889	0.10063056037850171	
TNRTRAEGNR	ddPTM_K562_Methotrexat_30min_R1	1	TNRTRAEGNR	10	2	Q02241-2;A0A2U3TZL8;Q02241-3;Q02241;H7BYN4	Q02241-2	KIF23	Kinesin-like protein KIF23;Kinesin-like protein	0		82.279	0.014224	0.0	1015.9	898.3	904.44	1163.2	763.01	725.87	740.77	1088.4	1188.9	1496.6	False	True	971.242252404314	1046.7288065107339	714.6104039039027	1061.2240619845065	863.3591889851916	866.13410442381	906.9065292862826	1050.1203550890077	1133.6282984994293	1225.5512376494896	0.7924942038874522	0.8540881640479405	0.5830930457664658	0.8659157033857273	0.7044660088149772	0.706730227032357	0.7399988686116932	0.8568555298455375	0.9249946176657932	1.0	10.259215086090487	-9.659192845210526	1.7762193995025046	0.9905728453996496	0.7478838988314785	0.5578703014799831	0.07713618841288383	0.2552457286740501	1.4877667630959188	0.06924420996044578	0.021161065042268973	2.1918314528993535e-10	9.659192845210526	-0.24268894656817108	
TNS(ph)MGSATGPLPGTK	ddPTM_K562_Methotrexat_30min_R1	1	TNSMGSATGPLPGTK	15	0	O15014	O15014	ZNF609	Zinc finger protein 609	1	T(0.03)NS(0.97)MGSATGPLPGTK	97.463	0.0033629	24161000.0	4924.0	3498.5	7153.9	4806.6	4035.3	3523.8	3045.9	4396.3	4969.8	5915.7	True	False	4707.546855831125	4076.5676606677075	5652.394153827923	4385.212840727928	4566.0126804523425	4204.724478444657	3729.020610382559	4241.679637153437	4738.755082750832	4844.309405694967	0.9717684114678836	0.8415167817058294	1.1668111345619196	0.9052297187237204	0.9425518269094334	0.8679719081323719	0.7697734182706673	0.8756004792276318	0.9782106562351189	1.0	12.242075297466084	-7.7674668248675545	2.431923582687325	0.8861469587193328	0.9809353259090431	0.10911268750160463	0.09721859514693688	0.5604316330758901	6.794810781354395	0.03235767980126003	0.04092303284737075	1.7081782003582625e-08	7.7674668248675545	0.09478836718971029	
TNS(ph)S(ph)DSERSPDLGHSTQIPR	ddPTM_K562_Methotrexat_30min_R1	1	TNSSDSERSPDLGHSTQIPR	20	1	B4DF77;Q6VY07;Q6VY07-2	B4DF77	PACS1	Phosphofurin acidic cluster sorting protein 1	2	T(0.269)NS(0.581)S(0.576)DS(0.386)ERS(0.156)PDLGHS(0.011)T(0.022)QIPR	75.743	0.018654	30400000.0	3045.0	2787.4	3591.4	2705.6	2055.9	1984.3	2088.6	3210.4	3067.5	3247.7	True	False	2911.1454459800507	3247.970472301035	2837.614219384896	2468.4042487149923	2326.28688566946	2367.7378916447387	2557.021716683086	3097.4884123279576	2924.892594538649	2659.5100591435566	1.0946171968672787	1.221266473926021	1.066968786084868	0.928142475050421	0.8747050524105162	0.8902910081141873	0.9614634499658652	1.1646838490716005	1.099786249908208	1.0	11.376944778378288	-6.992865613499453	5.690898050118858	0.9858697998738575	1.1565621456201922	0.3694031056612498	0.08869147026083979	0.18189716727955282	21.234250576015373	0.027109416286068503	0.054451777644052506	1.0165632058181752e-07	6.992865613499453	0.17069234574633474	
TNS(ph)SDSERSPDLGHSTQIPR	ddPTM_K562_Methotrexat_30min_R1	1	TNSSDSERSPDLGHSTQIPR	20	1	B4DF77;Q6VY07;Q6VY07-2	B4DF77	PACS1	Phosphofurin acidic cluster sorting protein 1	1	T(0.145)NS(0.469)S(0.367)DS(0.013)ERS(0.005)PDLGHSTQIPR	90.978	0.00099281	22620000.0	639.08	590.97	746.02	835.51	611.07	662.48	522.76	635.03	664.41	850.54	True	False	610.9868084127853	688.6177477275395	589.4405969665088	762.2621355129596	691.4364157916423	790.4948840683393	640.0022371987217	612.6956349615695	633.5217241197793	696.4989640988892	0.8772257245253233	0.9886845253509512	0.8462907015649485	1.0944196255900436	0.9927314345487983	1.134954859683186	0.9188846935712798	0.8796791761984282	0.9095802819167317	1.0	9.44397739688624	-5.374119680285144	18.402120937002508	0.9661943912599466	0.9653082438483245	0.0	0.09082687497318208	0.0	0.0	0.021343672486732	0.0	4.225521538152535e-06	5.374119680285144	-0.0008861474116220736	
TNSMSSSGLGS(ph)PNR	ddPTM_K562_Methotrexat_30min_R1	1	TNSMSSSGLGSPNR	14	0	F8VQD8;A0A087X050;F8VVY1;F8VX63;F8VUB4;F8VV52;F8VP97;Q9NZN8-4;Q9NZN8-5;Q9NZN8	F8VQD8	CNOT2	CCR4-NOT transcription complex subunit 2	1	TNS(0.001)MS(0.016)S(0.025)S(0.008)GLGS(0.95)PNR	82.94200000000001	0.024730000000000002	180960000.0	6211.6	5365.9	7064.6	6706.1	5718.8	5230.4	5313.1	7383.7	7371.9	7135.7	True	False	5938.5455015598345	6252.523770294941	5581.837003471223	6118.186624891932	6470.922438721001	6241.1007753155445	6504.697923445804	7124.011085879	7029.181978053615	5843.355583653258	1.0162902833044887	1.0700228115137007	0.9552451367304036	1.0470330852374468	1.107398368297722	1.0680679424635693	1.1131785205135636	1.2191643968764054	1.2029358606410498	1.0	12.512581368428043	-8.232731512991602	1.0984361441851458	1.1511832940980202	1.0197705930643235	0.33872865289377807	0.06489347769262542	0.5051823953755099	1.272698031305281	0.034234474431711806	0.03175821078521145	5.851517214418284e-09	8.232731512991602	-0.13141270103369673	
TNSS(ph)DS(ph)ERSPDLGHSTQIPR	ddPTM_K562_Methotrexat_30min_R1	1	TNSSDSERSPDLGHSTQIPR	20	1	B4DF77;Q6VY07;Q6VY07-2	B4DF77	PACS1	Phosphofurin acidic cluster sorting protein 1	2	T(0.251)NS(0.184)S(0.649)DS(0.846)ERS(0.07)PDLGHSTQIPR	76.76100000000001	0.016728	26089000.0	2437.9	2147.4	2657.7	2237.7	2159.2	2006.7	1952.0	2007.6	2213.9	2724.3	True	False	2330.732835059037	2502.221350441	2099.885089619434	2041.5243152533792	2443.1726463045375	2394.4663746225347	2389.785689440481	1936.9915700814868	2110.9762722246505	2230.902870993257	1.0447486824118584	1.121618239402303	0.9412714094022883	0.9151112501569549	1.0951497163194615	1.0733171783298907	1.071219065837898	0.8682545507770525	0.9462430210082559	1.0	11.12341198758222	-9.252372674591511	24.96068537827434	0.9304365875779007	1.0359144015074844	0.30809969644069646	0.06788491930046452	766.5083281552834	2110208.552627466	0.03457744737260264	0.019617230688337806	5.592774711568561e-10	9.252372674591511	0.10547781392958366	
TNTNVNCPIECFMPLDVQADREDS(ph)RE	ddPTM_K562_Methotrexat_30min_R1	6	TNTNVNCPIECFMPLDVQADREDSRE	26	2	H0Y7Z1;P02751-12;P02751-10;P02751-6;P02751-5;P02751-9;P02751-14;P02751-13;P02751-8;P02751-17;P02751-3;P02751-11;P02751-1;P02751-7;P02751	H0Y7Z1	FN1	Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3	1	TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE	88.531	0.00028953	690915000.0	7011.780000000001	6280.81	8352.07	6786.600000000001	6656.51	5654.56	5864.3	8453.74	7813.000000000001	9827.099999999999	True	False	6703.550546868314	7318.60709698395	6599.084644789775	6191.629314876251	7531.957739835404	6747.2236922736865	7179.518554603383	8156.417172574557	7449.775335331853	8047.316963454026	0.833016839937053	0.9094468541776807	0.8200353825702115	0.7694029380220551	0.9359588759882247	0.8384438842058085	0.8921630137359258	1.0135573396221371	0.9257464778837666	1.0	12.974292142581847	-9.078252697460798	4.267496867336251	0.9763364369189458	0.8529844130764362	0.5848475307902683	0.048363080636726535	0.16773818473765806	5.633396861011051	0.023618671747266524	0.013418710722618112	8.351169578490187e-10	9.078252697460798	-0.12335202384250954	
TPAAAAAMNLAS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	TPAAAAAMNLASPR	14	0	Q9UQ35	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	TPAAAAAMNLAS(1)PR;TPAAAAAMNLAS(1)PR	93.10600000000001	0.0087907	338760000.0	4132.9	3565.5	4833.200000000001	4337.7	3684.1	3444.0	3781.4	4662.3	4321.5	5494.799999999999	True	False	3951.22266459473	4154.638271862433	3818.777369585981	3957.4205757137156	4168.62372464364	4109.504257836253	4629.475208017537	4498.324266383206	4120.594408247358	4499.638474299356	0.8781200283451616	0.9233271285221101	0.8486853758135774	0.8794974525881061	0.926435256621976	0.9132965417796478	1.028854925670089	0.999707930331813	0.9157612176584877	1.0	12.135593376707096	-8.612820333518139	5.558117132735229	0.9857245445784022	0.8926999596518324	0.6360572351145	0.03407624356444729	0.1409109220143605	6.883774973093382	0.013583513292608528	0.010439440333872006	2.4388195429143815e-09	8.612820333518139	-0.09302458492656984	
TPAALAALSLTGSGT(ph)PPTAANYPSSSR	ddPTM_K562_Methotrexat_30min_R1	2	TPAALAALSLTGSGTPPTAANYPSSSR	27	0	Q9UQ35	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	TPAALAALS(0.001)LT(0.006)GS(0.2)GT(0.793)PPTAANYPSSSR;TPAALAALSLT(0.002)GS(0.041)GT(0.957)PPTAANYPSSSR	120.26	6.4879e-14	23716000.0	4090.2999999999997	3721.6000000000004	5667.7	3906.8999999999996	3831.7	3836.3	3560.5	4814.4	4608.0	5245.700000000001	True	False	3910.4953095869287	4336.531143616107	4478.127223703227	3564.388142853567	4335.635711765974	4577.610680701866	4359.032759863128	4645.074823172102	4393.775085781286	4295.652898127712	0.9103378234520165	1.009516189146989	1.0424788338124449	0.8297663306099821	1.0093077384477893	1.065637934270026	1.014754418766712	1.081343146974628	1.022842205825415	1.0	12.068661708529909	-7.9899846398977585	24.997143919236418	1.0402653684909846	0.9542104151814853	0.3450923552307895	0.05759166856740323	249.46089654973312	622620.3670184166	0.017847801143236308	0.02021491460120122	1.0233291846884344e-08	7.9899846398977585	-0.0860549533094993	
TPAAPAS(ph)PAAVPSEGSGGSTTGWR	ddPTM_K562_Methotrexat_30min_R1	3	TPAAPASPAAVPSEGSGGSTTGWR	24	0	P07199	P07199	CENPB	Major centromere autoantigen B	1	TPAAPAS(0.992)PAAVPS(0.008)EGSGGSTTGWR;T(0.002)PAAPAS(0.998)PAAVPSEGSGGSTTGWR;T(0.006)PAAPAS(0.994)PAAVPSEGSGGSTTGWR	212.24	2.6723e-41	470699000.0	6141.9	5016.400000000001	6865.0	7063.7	5959.599999999999	5278.900000000001	5204.7	6243.8	6323.2	6764.700000000001	True	False	5871.9094301034065	5845.27483577919	5424.130315775832	6444.4363881017525	6743.391859446328	6298.972713905863	6371.986464052695	6024.202014980468	6029.235812155436	5539.5472787167655	1.0599980710812946	1.0551899896652288	0.9791649105723185	1.1633507331657984	1.2173182247861296	1.1370916064038032	1.1502720607754726	1.087489953940058	1.088398655846856	1.0	12.435552361037907	-7.26931886517136	24.989622897773124	1.1301639820381266	1.03382488924832	0.32153893922010457	0.05812645507413568	639.9189173452916	2029486.654610314	0.016532004653972074	0.025057487870320458	5.3787472225095686e-08	7.26931886517136	-0.09633909278980668	
TPADRGPS(ph)PAPAPAAS(ph)PQPGSR	ddPTM_K562_Methotrexat_30min_R1	1	TPADRGPSPAPAPAASPQPGSR	22	1	Q8IX07	Q8IX07	ZFPM1	Zinc finger protein ZFPM1	2	T(0.085)PADRGPS(0.915)PAPAPAAS(0.587)PQPGS(0.412)R	68.45	0.018598	57447000.0	2024.7	1655.5	2494.5	2326.7	1954.4	1698.9	1735.8	2005.4	2080.2	2091.8	True	False	1935.6966123073264	1929.0432363113894	1970.9385393594762	2122.721823434793	2211.4378565846564	2027.1883808472737	2125.0973359276554	1934.8689453284585	1983.4919560421517	1712.9547500435683	1.1300337106150018	1.126149558978324	1.150607474779673	1.2392165195144835	1.2910077493456318	1.1834453775242533	1.2406033118350641	1.1295505297377213	1.1579359910071778	1.0	10.742271325897198	-10.330870949479642	1.1867916737328041	1.0006959826691784	1.192958603947759	0.5373535219237527	0.05220701407058874	0.9829796257786765	2.3329682890936203	0.055236040313986275	0.01699062116857914	4.667980686624663e-11	10.330870949479642	0.19226262127858074	
TPADRGPSPAPAPAAS(ph)PQPGSR	ddPTM_K562_Methotrexat_30min_R1	2	TPADRGPSPAPAPAASPQPGSR	22	1	Q8IX07	Q8IX07	ZFPM1	Zinc finger protein ZFPM1	1	TPADRGPSPAPAPAAS(0.951)PQPGS(0.049)R;TPADRGPS(0.002)PAPAPAAS(0.582)PQPGS(0.416)R	94.00299999999999	0.00016682	86734000.0	2080.3	1945.79	2787.1	2157.2	1666.55	2037.0300000000002	1696.2199999999998	2278.36	2321.1000000000004	2263.21	True	False	1988.8525028808876	2267.2987247250617	2202.1257979750653	1968.081625269064	1885.7305361702602	2430.6572178688107	2076.6405133927924	2198.228787413259	2213.1925676230353	1853.3207380467072	1.0731291470773823	1.2233709353053823	1.1882054480736985	1.061921762847864	1.0174874199906223	1.3115146061715053	1.1204971005620168	1.1861027302430474	1.194176767241925	1.0	10.855896862274983	-12.691911983541466	2.7365531826588643	0.9778944680222591	1.1540681696307695	0.23571249566589958	0.08259293209873163	27003069.92113539	24660746.612507384	4147946.398721873	0.021423750795742293	2.0327689410936102e-13	12.691911983541466	0.17617370160851042	
TPADRGPSPAPAPAASPQPGS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TPADRGPSPAPAPAASPQPGSR	22	1	Q8IX07	Q8IX07	ZFPM1	Zinc finger protein ZFPM1	1	T(0.003)PADRGPS(0.11)PAPAPAAS(0.242)PQPGS(0.645)R	74.277	0.0026414000000000003	51567000.0	518.51	401.51	591.52	630.57	503.81	486.64	578.65	568.8	629.41	608.61	True	False	495.7169212463436	467.8527029969108	467.3680355990851	575.2889071230829	570.0698457459654	580.6762926926345	708.4269924153347	548.7949816010909	600.1488664803817	498.3848314485207	0.9946468872368708	0.9387378456866948	0.9377653694650228	1.1543066137286841	1.1438346630436107	1.1651163038107308	1.4214457337241608	1.101147039339172	1.2041876650541128	1.0	8.961116349775862	-7.324144943277673	4.052190813880808	1.1865990116397869	0.9540413764684887	0.47817824155843747	0.10122109162175105	0.18116007795740408	5.980356256218626	0.028903757162890037	0.04533963572012313	4.7408373614263694e-08	7.324144943277673	-0.23255763517129813	
TPADTGFAFPDWAYKPES(ph)SPGSR	ddPTM_K562_Methotrexat_30min_R1	1	TPADTGFAFPDWAYKPESSPGSR	23	1	P50548	P50548	ERF	ETS domain-containing transcription factor ERF	1	TPADTGFAFPDWAYKPES(0.459)S(0.459)PGS(0.081)R	81.79899999999999	0.00083565	8976500.0	1058.3	692.95	1005.8	826.83	608.98	672.97	626.63	972.0	985.14	1344.2	True	False	1011.77839917264	807.4482093639247	794.6963250702594	754.3430976363903	689.0715441582704	803.0119281057091	767.167728777709	937.8142090651551	939.3410564250388	1100.7523544356843	0.919169870584871	0.7335421142731727	0.7219574156420235	0.6852977371309958	0.6260005180834088	0.7295118878191127	0.6969485240583546	0.8519756558194584	0.8533627501588265	1.0	10.10427421476842	-9.834294653225141	1.2954301406584843	0.9916040175240992	0.7244233395434356	0.5561264672649568	0.07477245783624813	0.3102848036013713	1.113604764108462	0.07275428919178012	0.022823100134029807	1.4645538565535981e-10	9.834294653225141	-0.2671806779806636	
TPADTGFAFPDWAYKPESS(ph)PGSR	ddPTM_K562_Methotrexat_30min_R1	1	TPADTGFAFPDWAYKPESSPGSR	23	1	P50548	P50548	ERF	ETS domain-containing transcription factor ERF	1	TPADTGFAFPDWAYKPES(0.249)S(0.71)PGS(0.041)R	98.073	1.2492e-05	10919000.0	1562.8	1331.4	1878.7	1250.0	1244.1	998.88	1131.5	1456.6	1774.6	2470.8	True	False	1494.1011832438837	1551.3912200694556	1484.38654395456	1140.4144407501997	1407.720956496608	1191.8994230741798	1385.2676780747456	1405.37055239126	1692.0992333392946	2023.31417745848	0.7384425018563603	0.7667574504015906	0.7336411519733054	0.5636368555390118	0.6957500580878007	0.5890827219781287	0.6846527808226028	0.694588397614339	0.8363007842236196	1.0	10.982504641665804	-9.995099632942669	2.2176819310695586	0.9993000806662441	0.6791732077948711	0.7379033274816865	0.06006517701977894	0.1621952894854637	1.8411605396548845	0.061630327372092814	0.017045005301405087	1.011347411068112e-10	9.995099632942669	-0.320126872871373	
TPAPPEPGS(ph)PAPGEGPSGR	ddPTM_K562_Methotrexat_30min_R1	2	TPAPPEPGSPAPGEGPSGR	19	0	P0C1Z6-2;P0C1Z6	P0C1Z6-2	TFPT	TCF3 fusion partner	1	TPAPPEPGS(0.999)PAPGEGPS(0.001)GR;TPAPPEPGS(0.994)PAPGEGPS(0.006)GR	98.882	0.00076815	67869000.0	2467.3	2117.06	3294.9	2582.57	2609.6	2394.2	2248.2	3055.0	2752.4	3290.8	True	False	2358.840446261604	2466.8681811328215	2603.345517472657	2356.160097798597	2952.8081408838084	2856.845265421475	2752.4160794057834	2947.5539184095164	2624.441524762243	2694.804231496019	0.875329056816901	0.9154164715569492	0.9660610915797068	0.8743344211280891	1.0957412439732435	1.0601309111925725	1.0213788620473485	1.0937914836111058	0.973889492263891	1.0	11.395964754482703	-7.758275843372134	24.999996579893185	1.0455048652991759	0.9124928961491816	0.6947518100210277	0.04308836882436112	45.45645251791464	359218.96910628333	0.012494793650165384	0.01545524743683721	1.7447136411022216e-08	7.758275843372134	-0.13301196914999425	
TPAPSYPHAASAGTPAS(ph)PPPLHRPEAYPPSSHNGGLGAR	ddPTM_K562_Methotrexat_30min_R1	1	TPAPSYPHAASAGTPASPPPLHRPEAYPPSSHNGGLGAR	39	1	A0A087WWH3;Q9NZM4-2;Q9NZM4	A0A087WWH3	GLTSCR1	Glioma tumor suppressor candidate region gene 1 protein	1	TPAPSYPHAAS(0.004)AGT(0.042)PAS(0.954)PPPLHRPEAY(0.001)PPSSHNGGLGAR	69.612	7.5886000000000005e-06	13988000.0	572.76	585.01	792.2	750.17	618.04	656.32	506.15	849.89	644.46	883.97	True	False	547.5821562034597	681.6729590302175	625.9280460535487	684.4037608140623	699.3230929613081	783.1445512494452	619.6670218802758	819.9988869777621	614.4991952653229	723.8744671555654	0.7564601060666789	0.9417005157107184	0.864691427110431	0.9454729954813827	0.9660833814311328	1.0818789538561555	0.856042103978652	1.1327915601166507	0.8489029840767446	1.0	9.49959571952145	-5.017331161597001	0.5936048797871926	0.9861038289481854	1.0040103208209386e-18	0.3436148400665735	0.08737653701321332	15.31384448574193	1.3178762537322941	0.03793093694727849	14.38275231926449	9.608793018232858e-06	5.017331161597001	-0.9861038289481854	
TPAS(ph)TPVS(ph)GTPQASPMIER	ddPTM_K562_Methotrexat_30min_R1	1	TPASTPVSGTPQASPMIER	19	0	Q9UHR4	Q9UHR4	BAIAP2L1	Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1	2	T(0.025)PAS(0.647)T(0.065)PVS(0.492)GT(0.451)PQAS(0.321)PMIER	84.94	0.00957	46379000.0	2191.3	1549.1	1877.6	1757.6	1628.3	1560.8	1427.8	2017.7	1983.4	1911.3	True	False	2094.9730757885354	1805.0624448021572	1483.5174189221696	1603.5139368500418	1842.4499907269726	1862.4025103457668	1748.0204955856136	1946.736347356753	1891.192166913759	1565.145049124329	1.3385168850392721	1.1532876430922858	0.9478466035797585	1.024514589077338	1.1771752348178788	1.1899232671040605	1.1168424910928225	1.2438057088995793	1.2083175089566602	1.0	10.61208064913975														
TPASGLQT(ph)PTSTPAPGSATR	ddPTM_K562_Methotrexat_30min_R1	1	TPASGLQTPTSTPAPGSATR	20	0	Q96DF8	Q96DF8	DGCR14	Protein DGCR14	1	TPASGLQT(0.991)PT(0.007)S(0.001)TPAPGSATR	159.26	1.1652e-14	13827000.0	469.26	538.02	624.25	627.54	633.4	537.6	552.04	467.11	549.71	501.71	True	False	448.6318922760586	626.9186602236507	493.22845588099955	572.5245425187042	716.7032021902994	641.4835914671226	675.8490225403292	450.68147653953184	524.1541020843816	410.84545733069984	1.091972381028284	1.5259233101828558	1.2005206509658146	1.393527742130698	1.744459356680697	1.5613744292924634	1.6450200689363381	1.0969610798854883	1.2757938361783487	1.0	8.682452004920082	-9.27856333729509	24.71653672001224	1.139783042163931	1.458238437318961	0.3732717207648929	0.1940764846084392	857.3185980264752	1237436.5856307927	0.10957146688023782	0.052849304892984963	5.265464180216358e-10	9.27856333729509	0.31845539515502996	
TPASGLQTPTSTPAPGS(ph)ATR	ddPTM_K562_Methotrexat_30min_R1	1	TPASGLQTPTSTPAPGSATR	20	0	Q96DF8	Q96DF8	DGCR14	Protein DGCR14	1	TPASGLQTPTSTPAPGS(0.892)AT(0.107)R	107.92	0.0012702	0.0	416.12	375.85	532.05	588.07	402.73	322.27	431.06	620.86	579.36	417.4	True	False	397.8278630480195	437.9528241423351	420.3799758934494	536.5148161375761	455.6960540228911	384.544116484579	527.7361779150681	599.0240018932018	552.4256800560431	341.8048153113037	1.1639036234340117	1.2812950681910762	1.2298831293835994	1.569652597342543	1.3332054833922082	1.125040079187737	1.5439694067341465	1.7525323666011903	1.616202157810192	1.0	8.417028911472228	-8.79207854438316	23.982587382404247	1.5408874219554105	1.296498938255789	0.1357971740941495	0.2169431750959888	199.97956974625708	156529.89972580475	0.08855871067176985	0.0597161902693871	1.6140666182066915e-09	8.79207854438316	-0.24438848369962152	
TPASTPVSGT(ph)PQASPMIER	ddPTM_K562_Methotrexat_30min_R1	1	TPASTPVSGTPQASPMIER	19	0	Q9UHR4	Q9UHR4	BAIAP2L1	Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1	1	TPAST(0.002)PVS(0.112)GT(0.883)PQAS(0.002)PMIER	100.27	0.011861	149770000.0	1529.2	1588.0	1634.0	1756.7	1683.5	1477.4	1502.2	1876.3	2083.6	1927.1	True	False	1461.9781990123786	1850.3900086152123	1291.0457299312022	1602.6928384527012	1904.9097582686582	1762.886640687364	1839.1065894864191	1810.3094655030357	1986.733890784265	1578.083516019198	0.9264263799550347	1.1725551847109603	0.8181098888783375	1.015594436025529	1.2071032609692909	1.1171060484392752	1.1654051074088057	1.1471569451974508	1.2589535792097428	1.0	10.623957842965558	-7.658698016618636	5.846304447844297	1.1553568532190086	0.9809968532730715	0.38758018090272195	0.10280206266811114	0.2120245730454484	10.339609005871397	0.029273510664011057	0.03784389468122603	2.1943302159023587e-08	7.658698016618636	-0.1743599999459371	
TPASTPVSGTPQAS(ph)PMIER	ddPTM_K562_Methotrexat_30min_R1	5	TPASTPVSGTPQASPMIER	19	0	Q9UHR4	Q9UHR4	BAIAP2L1	Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1	1	TPASTPVS(0.056)GT(0.222)PQAS(0.722)PMIER;TPAS(0.001)TPVS(0.1)GT(0.174)PQAS(0.724)PMIER;TPASTPVS(0.015)GT(0.187)PQAS(0.798)PMIER;TPASTPVSGT(0.002)PQAS(0.998)PMIER;TPASTPVS(0.035)GT(0.211)PQAS(0.754)PMIER	191.07	1.6893e-15	174938700.0	5402.679999999999	4948.23	6724.92	5129.95	5698.06	5378.47	4658.54	6079.49	6620.4	5412.789999999999	True	False	5165.1846561863695	5765.840901971065	5313.4511934693655	4680.215248261193	6447.454765191756	6417.783207213869	5703.336181191628	5865.670890812262	6312.619049024835	4432.481279992502	1.1653032082732466	1.300815623970513	1.1987532169517372	1.055890584216773	1.4545926667066855	1.4478985475207071	1.286714104566117	1.3233379951967184	1.4241727489113079	1.0	12.113898822764277	-7.766705215910955	24.999596306052787	1.3434049269287298	1.1901326271716843	0.20096833847650442	0.13502262620726657	192.1589532711035	912275.0588364479	0.0400081021665093	0.04671562496752249	1.711176408414018e-08	7.766705215910955	-0.15327229975704548	
TPDELY(ph)FEEGDIIY(ph)ITDMS(ph)DT(ph)NWWK	ddPTM_K562_Methotrexat_30min_R1	2	TPDELYFEEGDIIYITDMSDTNWWK	25	0	Q92882	Q92882	OSTF1	Osteoclast-stimulating factor 1	4	T(0.097)PDELY(0.958)FEEGDIIY(0.746)IT(0.209)DMS(0.995)DT(0.995)NWWK;T(0.456)PDELY(0.545)FEEGDIIY(0.563)IT(0.455)DMS(0.992)DT(0.99)NWWK	55.852	0.010957	0.0	13351.3	8718.1	19658.9	14034.1	9369.1	9372.5	8463.83	11599.5	12797.3	16860.1	True	False	12764.392838395224	10158.617842637463	15532.765544764086	12803.752242345914	10601.300870920633	11183.602978098224	10362.05932984479	11191.539010340812	12202.356316247578	13806.572512290635	0.9245156846155944	0.7357812978995506	1.1250269051885826	0.9273664576018408	0.767844507496943	0.8100202253776281	0.7505164167732771	0.810595026417895	0.8838077883113292	1.0	13.753067593913912	-7.74066112693162	24.017706976940357	0.8219741934291745	0.9284914668492923	0.13404314837127662	0.10936437556647917	274.13830477506775	316875.6098588354	0.03209113404265553	0.041374391547675866	1.8169328335599202e-08	7.74066112693162	0.10651727342011774	
TPEELDDS(ph)DFETEDFDVR	ddPTM_K562_Methotrexat_30min_R1	8	TPEELDDSDFETEDFDVR	18	0	G3XAM7;P35221-3;P35221;P35221-2	G3XAM7	CTNNA1	Catenin alpha-1	1	TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(0.98)DFET(0.02)EDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR	240.34	1.2883999999999998e-69	469184700.0	8320.289999999999	7125.340000000001	9625.68	8858.85	7298.06	7242.120000000001	6261.39	8680.09	8173.749999999999	10048.98	True	False	7954.540014033942	8302.681324928419	7605.381310700234	8082.208374751924	8257.882809878327	8641.55719389114	7665.666095289819	8374.806314778149	7793.754146572217	8229.012345392875	0.9666457747493111	1.0089523476747229	0.9242155670064355	0.9821601956007343	1.0035083754007994	1.050132972364446	0.9315414503639123	1.017717067767786	0.9471068725441464	1.0	13.006503571942227	-7.517232751650418	24.71358306366577	0.9925036518593532	0.967897433030819	0.08460376278724868	0.036751312584633475	574.8106897304356	2516057.581143583	0.010492703876699304	0.013973886850144192	3.039255759328695e-08	7.517232751650418	-0.0246062188285342	
TPETVVPTAPELQISTSTDQPVT(ph)PKPTSR	ddPTM_K562_Methotrexat_30min_R1	1	TPETVVPTAPELQISTSTDQPVTPKPTSR	29	1	Q14676;Q14676-2	Q14676	MDC1	Mediator of DNA damage checkpoint protein 1	1	TPETVVPTAPELQIS(0.01)T(0.008)S(0.008)T(0.01)DQPVT(0.932)PKPT(0.005)S(0.025)R	88.242	0.00014475	11826000.0	552.72	421.41	519.8	307.93	372.64	404.06	351.03	633.51	557.37	644.7	True	False	528.4230906082413	491.0408397547462	410.70108348729445	280.93425499216715	421.6486916075039	482.1388764289535	429.7574131989197	611.2290942231137	531.4579903563186	527.9385827292703	1.0009177353101686	0.9301097813617357	0.7779334508269955	0.5321343508175301	0.7986699691992916	0.9132480409680475	0.8140291830485548	1.1577655322391076	1.006666320178484	1.0	9.044226294461332	-9.247002487982323	24.03661564242092	1.0616619339948294	0.8174316372245846	0.4186713594530733	0.1244689306453719	465.4346790077269	774925.0381152653	0.06467610383487181	0.03709197907602263	5.66236045180997e-10	9.247002487982323	-0.24423029677024488	
TPGVLLPGAGGAAGFGMTSPPPPTSPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TPGVLLPGAGGAAGFGMTSPPPPTSPSR	28	0	Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR72;A0A0A0MR80;Q96L91-4;Q6ZTU2-4;Q6ZTU2-5;Q6ZTU2-2;Q6ZTU2-6;Q6ZTU2	Q96L91-3	EP400;EP400NL	E1A-binding protein p400;EP400 N-terminal-like protein	1	TPGVLLPGAGGAAGFGMTSPPPPT(0.241)S(0.17)PS(0.589)R	90.67399999999999	0.00028972	40143000.0	2258.9	1613.2	2670.1	2364.2	1670.4	1788.3	1755.1	2258.9	2304.6	2267.4	True	False	2159.6014607304896	1879.7538802884528	2109.682499075461	2156.934256657299	1890.0868786527865	2133.8636655890164	2148.7258522218162	2179.4532066432926	2197.4596490216036	1856.751888444777	1.1631071842018594	1.0123882959197863	1.1362220834160774	1.1616706949811997	1.0179533896884472	1.1492454532395007	1.157249854218055	1.1737988366710705	1.1834966549365973	1.0	10.85856533029351														
TPHYGSQT(ph)PLHDGSR	ddPTM_K562_Methotrexat_30min_R1	2	TPHYGSQTPLHDGSR	15	0	O00267-2;O00267	O00267-2	SUPT5H	Transcription elongation factor SPT5	1	TPHYGSQT(1)PLHDGSR;TPHYGSQT(1)PLHDGSR	136.66	2.9104e-05	10983000.0	2232.37	1556.25	2373.21	2244.03	1715.3400000000001	1787.9	1718.1999999999998	1863.59	1777.19	2055.08	True	False	2134.237687764363	1813.393860772937	1875.1056528335553	2047.2993739813373	1940.9372763579213	2133.386371250127	2103.550087908111	1798.0464834071322	1694.5688248046101	1682.885097867642	1.2682016677601002	1.0775506082207638	1.1142208432467986	1.2165413886993468	1.1533391547748884	1.267695800475807	1.2499665548013275	1.0684309259648264	1.0069426765688119	1.0	10.71672096198622	-9.45965835711181	4.389858597813185	1.0109310923676966	1.18698006494983	0.624553025435931	0.06059891994730985	0.1541558197987174	5.86162829043737	0.039808899301561146	0.01707368510788742	3.4700972240978456e-10	9.45965835711181	0.17604897258213348	
TPIS(ph)PLK	ddPTM_K562_Methotrexat_30min_R1	1	TPISPLK	7	0	Q9NQW6-2;Q9NQW6	Q9NQW6-2	ANLN	Actin-binding protein anillin	1	T(0.264)PIS(0.736)PLK	86.882	0.023997	32020000.0	5605.9	3714.8	7958.1	5396.7	3700.7	3769.3	3712.5	4873.8	4833.1	5689.3	True	False	5359.471348315129	4328.607559196344	6287.803563871181	4923.579689917286	4187.406915607261	4497.663878937916	4545.122629122838	4702.385691503865	4608.410235913528	4658.912639555824	1.1503695739669622	0.929102538314397	1.3496289907832772	1.0568087600772644	0.8987948990617871	0.9653891856119282	0.9755758437136449	1.0093311584293165	0.9891600449397756	1.0	12.185777563024056	-7.523893519001587	24.983894194655196	0.9736660363731261	1.135236963131973	0.37633296097868363	0.09826887718091692	36.067311643785395	887964.4977110733	0.028346320344318658	0.0369047485857477	2.9929983746644735e-08	7.523893519001587	0.16157092675884688	
TPKDS(ph)PGIPPSANAHQLFR	ddPTM_K562_Methotrexat_30min_R1	1	TPKDSPGIPPSANAHQLFR	19	1	B4DG22;B1AXG1;B7ZB17;P51812	B4DG22	RPS6KA3	Ribosomal protein S6 kinase alpha-3	1	T(0.328)PKDS(0.672)PGIPPSANAHQLFR	95.344	0.00084076	26619000.0	3126.7	1762.3	3753.7	3556.3	2456.0	2200.7	2108.8	3210.2	3184.6	4454.7	True	False	2989.2540118048705	2053.4901210217827	2965.8496673456275	3244.524700511949	2779.007048593896	2625.9541289838094	2581.7520808873387	3097.2954464413183	3036.548641097894	3647.910663074424	0.8194427681750177	0.5629222617231314	0.8130269464565335	0.8894199996053344	0.7618078690150201	0.719851545588751	0.7077344593497975	0.849060114819519	0.8324076222137303	1.0	11.832854683156604	-10.099054609705881	1.1666588752954277	0.9977324664371283	0.7541454357330689	0.4300376828281576	0.08420597347214714	0.5979430672159105	1.7639905210443059	0.08314225549215382	0.026126896936368993	7.960592448522072e-11	10.099054609705881	-0.2435870307040594	
TPLDLFAHFGPEPGDHSDPLPPSAPSPT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TPLDLFAHFGPEPGDHSDPLPPSAPSPTR	29	0	Q8N1G0;F8WCX2;Q8N1G0-2	Q8N1G0	ZNF687	Zinc finger protein 687	1	TPLDLFAHFGPEPGDHSDPLPPS(0.033)APS(0.242)PT(0.724)R	81.732	0.00044697	3946500.0	1238.2	860.3	1191.4	1044.4	1104.9	873.21	1148.7	1579.2	1789.5	1602.1	True	False	1183.7702105788178	1002.4499524002948	941.3414214443302	952.839073535607	1250.2137166088758	1041.9454741536574	1406.3252159120293	1523.6586409009194	1706.3065355914953	1311.944165333588	0.9023022792115704	0.7640949812413715	0.7175163747955503	0.7262802020948267	0.9529473506907848	0.7941995564184106	1.071939837892753	1.1613746081286156	1.3005938672379649	1.0	10.357490606668067	-8.868021807322657	2.6231745507269935	1.1720452221870445	0.8020033397295638	0.7265841420073803	0.09768415996648712	0.14072431668281635	1.9580021814691857	0.04754735315686386	0.029618850240851546	1.3551213656406958e-09	8.868021807322657	-0.3700418824574807	
TPLSTGGTLAFVS(ph)PSLAVHK	ddPTM_K562_Methotrexat_30min_R1	2	TPLSTGGTLAFVSPSLAVHK	20	0	Q86YP4-2;Q86YP4;Q86YP4-3	Q86YP4-2	GATAD2A	Transcriptional repressor p66-alpha	1	TPLSTGGTLAFVS(0.954)PS(0.046)LAVHK;TPLSTGGTLAFVS(0.967)PS(0.033)LAVHK	115.84	7.142800000000001e-05	21194000.0	2555.9	1854.67	3706.6	2369.9	2052.41	2004.73	1666.19	2946.7	2269.91	3130.4	True	False	2443.5456963482466	2161.122693500238	2928.635313686043	2162.134546507121	2322.337889496986	2392.115700003504	2039.8755214594426	2843.062890794539	2164.3823795498706	2563.454225803799	0.9532238460712308	0.8430510175474634	1.1424566447125606	0.843445740026491	0.9059408458010564	0.9331610745861593	0.7957526609704986	1.109074959161038	0.8443226166331115	1.0	11.323873421213188	-13.125448537672067	4.657820255238757	1.2615437115623582	0.9318873870383597	0.03551311638335797	0.10898578617718636	0.15453672384941977	0.004162122786719971	0.055092091591509795	0.024057984064884554	7.491201212810298e-14	13.125448537672067	-0.3296563245239985	
TPLT(ph)SADEHVHSK	ddPTM_K562_Methotrexat_30min_R1	1	TPLTSADEHVHSK	13	0	Q5SW79-2;H0Y2V6;Q5SW79-3;Q5SW79	Q5SW79-2	CEP170	Centrosomal protein of 170 kDa	1	T(0.087)PLT(0.54)S(0.374)ADEHVHSK	97.417	0.016204	18029000.0	2657.6	1832.4	3346.3	3096.0	1990.3	1641.6	1537.2	2255.0	2179.4	2097.8	True	False	2540.775086120388	2135.172954525515	2643.9573598952165	2824.5784868500955	2252.05933583731	1958.8159668013918	1881.9562304343788	2175.6903718538333	2078.0801696943886	1717.8680919023789	1.4790280453411975	1.2429202012600453	1.5390921877868282	1.6442347932093773	1.310961735917316	1.1402598232278625	1.095518473918616	1.26650607349279	1.2096855279459253	1.0	10.74640354671215	-8.0177902990654	4.9292475591482425	1.160730748189347	1.4667671792286485	0.6504572535598094	0.11482254998072627	0.134516442630601	9.03208234073819	0.0394673806661141	0.04178853320744019	9.598639940437525e-09	8.0177902990654	0.30603643103930156	
TPLTS(ph)ADEHVHSK	ddPTM_K562_Methotrexat_30min_R1	1	TPLTSADEHVHSK	13	0	Q5SW79-2;H0Y2V6;Q5SW79-3;Q5SW79	Q5SW79-2	CEP170	Centrosomal protein of 170 kDa	1	T(0.194)PLT(0.182)S(0.624)ADEHVHSK	103.77	0.002648	12951000.0	2495.3	1711.9	3402.4	2447.3	1743.7	1888.8	1553.5	1972.6	2158.2	2437.8	True	False	2385.6095997878565	1994.7623776753037	2688.2827365470757	2232.749008678371	1973.0271134499915	2253.7838682349334	1901.9119203615703	1903.222539919676	2057.865753067095	1996.2907972350165	1.1950210876552003	0.9992343702822105	1.346638846540048	1.1184487809946644	0.9883465455948369	1.1289857526551543	0.9527228813536752	0.9533794087293065	1.030844682506859	1.0	10.963106176264636	-7.626997656932323	4.876883927155871	1.0105271843549724	1.1725443727652938	0.4219276506126147	0.09105648424333052	0.2131086669792298	8.321813784977362	0.027147548093255428	0.03536985698376069	2.3604909682610362e-08	7.626997656932323	0.16201718841032142	
TPMYGSQT(ph)PMYGSGSR	ddPTM_K562_Methotrexat_30min_R1	1	TPMYGSQTPMYGSGSR	16	0	O00267-2;O00267	O00267-2	SUPT5H	Transcription elongation factor SPT5	1	T(0.023)PMY(0.251)GS(0.178)QT(0.541)PMY(0.007)GSGSR	67.29899999999999	0.028926	6326500.0	1106.8	879.7	825.71	1105.7	917.14	828.44	823.03	1016.0	1059.4	1316.2	True	False	1058.1463972448996	1025.0554726566768	652.404754994794	1008.7649977099968	1037.7599855649055	988.5243052734796	1007.6154282685442	980.2667041257178	1010.1487252336585	1077.823425761232	0.9817437364543871	0.9510421170635747	0.6052983627944637	0.9359278835469163	0.9628293102202422	0.9171486550084181	0.9348613178980572	0.9094872877098462	0.937211700070652	1.0	10.073905132841489	-7.459988484716451	24.999993712239764	0.9384057913017688	0.8422101731606227	0.17230261768000021	0.0965058048979271	402.8575235262219	160142.16568120473	0.027745298309758408	0.041152876811997	3.4674604427435236e-08	7.459988484716451	-0.09619561814114608	
TPMYGSQTPLQDGS(ph)RTPHYGSQTPLHDGSR	ddPTM_K562_Methotrexat_30min_R1	1	TPMYGSQTPLQDGSRTPHYGSQTPLHDGSR	30	1	O00267-2;O00267	O00267-2	SUPT5H	Transcription elongation factor SPT5	1	T(0.008)PMY(0.041)GS(0.147)QT(0.137)PLQDGS(0.453)RT(0.194)PHY(0.006)GS(0.006)QT(0.007)PLHDGSR	51.66	0.0030751	29390000.0	266.07	317.08	456.85	450.83	270.31	394.81	266.19	490.36	600.16	526.28	True	False	254.37388138322254	369.4720805615315	360.96342822464504	411.3064338587304	305.86050297451794	471.1014448421401	325.88988354106635	473.11376086130593	572.2586925960277	430.96559224253235	0.5902417407839599	0.8573122476877587	0.8375690187849323	0.9543834618408736	0.7097097969769948	1.0931300626362317	0.7561853878990574	1.0977993820793333	1.3278523921556609	1.0	8.751428880707177	-9.387653358691995	4.785737512745574	1.1778386508036929	0.840969270220696	0.48499453991968977	0.14811485712842112	0.1846346206450544	6.333024181856863	0.0821530177580556	0.0374306189452052	4.0958745016441563e-10	9.387653358691995	-0.33686938058299687	
TPPAAAASSS(ph)SPS(ph)CTPATSQGHLR	ddPTM_K562_Methotrexat_30min_R1	1	TPPAAAASSSSPSCTPATSQGHLR	24	0	Q6ZU67-3	Q6ZU67-3	BEND4	BEN domain-containing protein 4	2	T(0.019)PPAAAAS(0.236)S(0.338)S(0.406)S(0.002)PS(0.725)CT(0.243)PAT(0.016)S(0.014)QGHLR	73.654	0.0032335999999999997	20244000.0	2245.4	2359.4	1990.0	2278.8	2200.5	1937.2	1827.0	2346.1	2534.8	2307.8	True	False	2146.6949045660444	2749.2507470571386	1572.3261949590535	2079.021142065246	2489.9043202080084	2311.53648324053	2236.7512574834823	2263.58633321786	2416.957701267016	1889.8350569607735	1.135916542906317	1.4547569836483374	0.8319912307519913	1.1001071942271623	1.317524675519706	1.2231419216859778	1.1835695656321554	1.197769257629368	1.2789252122108261	1.0	10.884044607526958	-5.057795119802853	13.981009982628217	1.1799972783064865	1.2037959116460484	0.0	0.16377308924495623	0.0	0.0	0.03682271001887559	0.0	8.753966497801312e-06	5.057795119802853	0.023798633339561892	
TPPSTT(ph)VGSHSPPETPVLTR	ddPTM_K562_Methotrexat_30min_R1	1	TPPSTTVGSHSPPETPVLTR	20	0	Q9ULU4-9;Q9ULU4-11;Q9ULU4-23;Q9ULU4;Q9ULU4-21;H7C4X9;A0A087WVZ6;Q9ULU4-10;Q9ULU4-13;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-19;Q9ULU4-16;Q9ULU4-22;Q9ULU4-14;Q9ULU4-6;Q9ULU4-3;Q9ULU4-4;Q9ULU4-18;Q9ULU4-15;Q9ULU4-2	Q9ULU4-9	ZMYND8	Protein kinase C-binding protein 1	1	TPPST(0.002)T(0.742)VGS(0.025)HS(0.23)PPET(0.001)PVLTR	124.45	3.3197e-05	115500000.0	428.29	330.91	256.05	366.42	275.01	181.99	309.06	388.06	372.0	426.05	True	False	409.4628844199657	385.5872529917256	202.30860413028424	334.2965275037507	311.17863535578493	217.15699183612654	378.37457232503823	374.41170984549836	354.70580119588504	348.8882164910901	1.17362199428258	1.105188523905257	0.5798665434017339	0.9581766070115698	0.8919150049991208	0.6224256984662946	1.0845151955273937	1.0731566506060548	1.0166746379780458	1.0	8.446621061893001														
TPPSTTVGS(ph)HSPPETPVLTR	ddPTM_K562_Methotrexat_30min_R1	2	TPPSTTVGSHSPPETPVLTR	20	0	Q9ULU4-9;Q9ULU4-11;Q9ULU4-23;Q9ULU4;Q9ULU4-21;H7C4X9;A0A087WVZ6;Q9ULU4-10;Q9ULU4-13;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-19;Q9ULU4-16;Q9ULU4-22;Q9ULU4-14;Q9ULU4-6;Q9ULU4-3;Q9ULU4-4;Q9ULU4-18;Q9ULU4-15;Q9ULU4-2	Q9ULU4-9	ZMYND8	Protein kinase C-binding protein 1	1	TPPST(0.001)T(0.002)VGS(0.887)HS(0.11)PPETPVLTR;TPPSTT(0.005)VGS(0.806)HS(0.188)PPET(0.001)PVLTR	159.5	4.9955e-15	805760000.0	2292.0	1590.3899999999999	2446.3	2181.3900000000003	1941.1399999999999	1651.8	1970.2600000000002	2303.0	2236.8	2421.1000000000004	True	False	2191.246424363311	1853.1749154921592	1932.8550606675044	1990.150925526463	2196.4339341643145	1970.9869724430669	2412.1409592607574	2222.0021846471727	2132.8116562229998	1982.6153290613267	1.1052302442354065	0.9347122905427896	0.9749017029857318	1.0038008363774247	1.1078467426176013	0.9941348397503991	1.2166459745889235	1.1207429661603516	1.0757566659351836	1.0	10.953189074841248	-7.7433960861628695	10.55837491681509	1.093849712050184	0.9974615611234025	0.2293553466576781	0.07153792566970377	0.4729203642611685	266.26256090856924	0.02109916074825432	0.02670508830658696	1.8055266946410992e-08	7.7433960861628695	-0.09638815092678155	
TPPSTTVGSHS(ph)PPETPVLTR	ddPTM_K562_Methotrexat_30min_R1	5	TPPSTTVGSHSPPETPVLTR	20	0	Q9ULU4-9;Q9ULU4-11;Q9ULU4-23;Q9ULU4;Q9ULU4-21;H7C4X9;A0A087WVZ6;Q9ULU4-10;Q9ULU4-13;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-19;Q9ULU4-16;Q9ULU4-22;Q9ULU4-14;Q9ULU4-6;Q9ULU4-3;Q9ULU4-4;Q9ULU4-18;Q9ULU4-15;Q9ULU4-2	Q9ULU4-9	ZMYND8	Protein kinase C-binding protein 1	1	TPPS(0.003)T(0.003)T(0.003)VGS(0.314)HS(0.675)PPETPVLTR;TPPS(0.008)T(0.008)T(0.007)VGS(0.386)HS(0.592)PPETPVLTR;TPPSTTVGS(0.028)HS(0.847)PPET(0.124)PVLT(0.001)R;TPPSTTVGS(0.01)HS(0.949)PPET(0.04)PVLTR;TPPSTTVGS(0.083)HS(0.916)PPETPVLTR	142.23	4.4588e-10	942331000.0	4233.08	4017.67	5441.289999999999	5010.35	3998.2699999999995	4310.44	3821.3100000000004	5029.87	4637.76	5068.52	True	False	4046.998871746875	4681.521678786576	4299.237588627511	4571.100394570211	4524.112586393126	5143.371525304207	4678.336041452767	4852.966621142544	4422.15154987696	4150.561913037012	0.9750484287525399	1.1279247911184764	1.03582061386038	1.1013208549455142	1.0900000243780925	1.2391988441730641	1.1271572715872527	1.169231232498728	1.065434426116348	1.0	12.019090949862436	-4.811784673014627	0.7440018172178412	1.1237410007079796	7.195279652097761e-14	0.22631088902197694	0.06596429654179864	28.238128250531364	2.160032528626721	0.024424822095997358	42.74599226375816	1.5424650309837203e-05	4.811784673014627	-1.1237410007079076	
TPQEAIMDGTEIAVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	3	TPQEAIMDGTEIAVSPR	17	0	Q06587	Q06587	RING1	E3 ubiquitin-protein ligase RING1	1	TPQEAIMDGT(0.001)EIAVS(0.999)PR;TPQEAIMDGTEIAVS(1)PR;TPQEAIMDGTEIAVS(1)PR	103.9	0.00083578	42751000.0	3678.3	2968.56	3690.6	3891.1	3113.34	3174.6400000000003	3725.0	3574.2	4191.8	4809.9	True	False	3516.606336272061	3459.0640831075425	2915.993495033107	3549.973304322483	3522.7987804028203	3788.0942500282486	4560.426072318537	3448.493360124156	3996.924132937932	3938.780501116052	0.892816021424812	0.878206866853184	0.7403290166098012	0.9012874170867351	0.8943881943674283	0.9617429173712253	1.1578269139461672	0.8755231115689301	1.0147618360061965	1.0	11.943533305885477	-8.138326916621901	2.153049916461959	1.0061445947798755	0.8474020488025399	0.47134365256238653	0.07628163592255639	0.29149528150037163	2.6592681254567285	0.029065459590445254	0.029046275687937544	7.2723217199996825e-09	8.138326916621901	-0.15874254597733561	
TPQEAITDGLEIVVS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	TPQEAITDGLEIVVSPR	17	0	X6RFN3;Q99496-2;Q99496	X6RFN3	RNF2	E3 ubiquitin-protein ligase RING2	1	TPQEAITDGLEIVVS(1)PR;TPQEAITDGLEIVVS(1)PR;TPQEAITDGLEIVVS(1)PR;TPQEAITDGLEIVVS(1)PR	155.53	6.2674e-11	44092100.0	3615.84	2673.38	3977.15	3571.93	2451.4400000000005	2604.1400000000003	2472.62	3089.7999999999997	3445.9500000000003	3405.9700000000003	True	False	3456.8920030845684	3115.1106053096605	3142.400565970552	3258.7844426790916	2773.8473286665394	3107.353199187487	3027.167977164097	2981.1299826846885	3285.7485366423653	2789.1158284759017	1.239422173791029	1.116881046497053	1.126665495167944	1.1683933701885152	0.9945256845723378	1.1140997327764206	1.0853503989535915	1.0688440946942357	1.1780609837339906	1.0	11.445592133584746	-3.0000000018637913	0.6903152673435684	1.0855055768178674	18.288426705474834	0.38808106366521866	0.05687561315338868	291.336424588886	1.6055016851368942	0.021749732390336434	7721.950050234993	0.0009999999957084618	3.0000000018637913	17.202921128656968	
TPQPSS(ph)PMDQMGK	ddPTM_K562_Methotrexat_30min_R1	1	TPQPSSPMDQMGK	13	0	O14497-2;O14497	O14497-2	ARID1A	AT-rich interactive domain-containing protein 1A	1	T(0.099)PQPS(0.345)S(0.557)PMDQMGK	83.869	0.017072	26239000.0	4563.1	3031.4	6042.7	4847.1	3297.7	2783.5	2732.2	3819.5	3768.8	4782.1	True	False	4362.511587701667	3532.287325010173	4774.4198483814425	4422.1622686082355	3731.405351851829	3321.3719807454163	3344.9653999432776	3685.1660200867927	3593.589310610354	3916.0153505035596	1.1140179997355455	0.9020105921076016	1.219203557965497	1.1292504938826633	0.9528576928004147	0.8481509093978199	0.8541757630018353	0.941049942414786	0.917664766086337	1.0	11.935170704877432	-7.893695187628992	4.938713552309105	0.9045173865436372	1.0858664228539603	0.5031479145678317	0.08419619680210978	0.1795714538036637	7.107482599431626	0.027048621415477397	0.0309105989373349	1.2773350000481423e-08	7.893695187628992	0.18134903631032306	
TPQS(ph)PAPCVLLR	ddPTM_K562_Methotrexat_30min_R1	1	TPQSPAPCVLLR	12	0	Q9Y613	Q9Y613	FHOD1	FH1/FH2 domain-containing protein 1	1	T(0.028)PQS(0.972)PAPCVLLR	153.81	1.0777999999999999e-07	91685000.0	871.28	712.43	1060.7	975.69	693.98	817.41	453.07	708.25	1103.7	958.68	True	False	832.9795744412146	830.146948260539	838.0735653231492	890.1527725564498	785.2505340322444	975.3629138786091	554.6824806940565	683.3404460600782	1052.3892279029521	785.0537622008644	1.061047809141112	1.0574396152605623	1.067536525108352	1.1338749209492924	1.0002506475872792	1.2424154380767773	0.7065534965898743	0.8704377699488538	1.340531411444516	1.0	9.616647646077958														
TPS(ph)GEFLER	ddPTM_K562_Methotrexat_30min_R1	3	TPSGEFLER	9	0	B3KT28;B1ANM7;Q9UNN5-2;Q9UNN5	B3KT28	FAF1	FAS-associated factor 1	1	T(0.214)PS(0.786)GEFLER;T(0.317)PS(0.683)GEFLER;T(0.005)PS(0.995)GEFLER	121.36	0.0042526000000000005	112328000.0	4043.69	3571.02	5836.5	4067.2000000000003	3878.4999999999995	2922.8	3360.04	3994.75	4079.5499999999997	4291.74	True	False	3865.934229377691	4161.070358038473	4611.498410491715	3710.634890735372	4388.590732073057	3487.589734263589	4113.614502022332	3854.2523782541434	3889.892610937295	3514.46429818911	1.1000066870418008	1.1839842448200537	1.3121483159945233	1.0558180638361705	1.2487225248907368	0.9923531549490007	1.1704812321302978	1.0966827519744944	1.1068237662683416	1.0	11.779089083989716	-8.2520745318282	24.980571548664678	1.0853866669291627	1.1807772261403917	0.2909149485163256	0.0823396907304882	963.6577391900489	2570543.153208963	0.026451938406955217	0.026117525652929335	5.596615464461865e-09	8.2520745318282	0.09539055921122896	
TPS(ph)IQPSLLPHAAPFAK	ddPTM_K562_Methotrexat_30min_R1	2	TPSIQPSLLPHAAPFAK	17	0	A0A494C1F2;P35658-2;P35658-4;P35658;P35658-3;P35658-5;A0A0A0MSW3;H0YF36	A0A494C1F2	NUP214	Nuclear pore complex protein Nup214	1	T(0.057)PS(0.943)IQPSLLPHAAPFAK;T(0.146)PS(0.854)IQPSLLPHAAPFAK	130.01	3.064e-05	205330000.0	12175.5	7597.700000000001	11177.8	13039.5	7349.5	6971.7	7313.9	8460.7	10756.0	12566.7	True	False	11640.279598532063	8853.09078618124	8831.73253367503	11896.34728012979	8316.088071515007	8318.882356085074	8954.228255122303	8163.132385429584	10255.955907696076	10290.748856187258	1.13114018826078	0.8602960688189728	0.8582205879375822	1.1560234776283724	0.8081130137108539	0.8083845473581245	0.8701240677677817	0.7932495972362151	0.9966190071318024	1.0	13.32906035029421														
TPS(ph)PNSNEQQK	ddPTM_K562_Methotrexat_30min_R1	1	TPSPNSNEQQK	11	0	Q9H4E7	Q9H4E7	DEF6	Differentially expressed in FDCP 6 homolog	1	T(0.004)PS(0.994)PNS(0.001)NEQQK	113.95	0.0001401	0.0	1672.9	1030.7	2023.5	1738.3	1368.9	1230.3	1168.1	1706.2	1419.5	2115.9	True	False	1599.3613190739009	1201.0056560955286	1598.7950027636412	1585.9059378848588	1548.9343439821598	1468.0380628385426	1430.0761597517535	1646.1919789166334	1353.5077548321472	1732.6900065097923	0.9230510437903089	0.6931451393978714	0.9227242015345494	0.9152854416696239	0.8939477564727364	0.8472594966918833	0.825350267144668	0.9500787635017331	0.7811597860823108	1.0	10.758797851407726	-12.918678498430316	2.7670837246245847	1.0822341889225835	0.8618763751534654	0.23721551760938053	0.07459139992701215	109994141.86787127	80609151.77105875	58885124.47666326	0.018607198144107117	1.205928340341867e-13	12.918678498430316	-0.22035781376911812	
TPS(ph)SPCPASK	ddPTM_K562_Methotrexat_30min_R1	3	TPSSPCPASK	10	0	Q9NQS7;Q9NQS7-2	Q9NQS7	INCENP	Inner centromere protein	1	T(0.001)PS(0.56)S(0.439)PCPASK;TPS(0.993)S(0.007)PCPASK;T(0.027)PS(0.961)S(0.012)PCPASK	152.69	3.1096999999999997e-09	50089000.0	13890.3	11272.8	20526.4	15169.0	11190.6	11482.5	10394.599999999999	13056.9	13355.3	17968.9	True	False	13279.699043775601	13135.438595162197	16218.189149853026	13839.157321391827	12662.36004804351	13701.3306157389	12725.853651361685	12597.681426278627	12734.415018041414	14714.558087798954	0.9024871127313628	0.892683186051905	1.1021866272219794	0.9405078452792277	0.8605328119600758	0.9311411551733787	0.8648478313401565	0.8561372588364986	0.8654296610239733	1.0	13.84495659501061	-7.544836251977906	11.529034373822332	0.8903065134553548	0.9689341722084439	0.17868548710917087	0.06708717253827662	0.9173642739040836	476.3214063292338	0.019909642312481046	0.025823099026914646	2.852093428814843e-08	7.544836251977906	0.07862765875308908	
TPS(ph)TVTLNNNSAPANR	ddPTM_K562_Methotrexat_30min_R1	3	TPSTVTLNNNSAPANR	16	0	Q9ULH0-2;Q9ULH0-4;Q9ULH0;Q9ULH0-5	Q9ULH0-2	KIDINS220	Kinase D-interacting substrate of 220 kDa	1	T(0.044)PS(0.95)T(0.005)VTLNNNSAPANR;T(0.029)PS(0.891)T(0.078)VT(0.003)LNNNSAPANR;T(0.006)PS(0.944)T(0.049)VT(0.001)LNNNSAPANR	235.26	3.3322999999999995e-51	150693000.0	3550.7799999999997	2415.48	2975.87	3389.07	2441.56	2079.99	2161.26	2808.37	3417.9700000000003	3504.33	True	False	3394.6919627839234	2814.5970138601233	2351.275554669747	3091.955494970623	2762.667935490601	2481.918629865514	2645.977571291052	2709.598035300732	3259.0693207352156	2869.6618793480143	1.182958866065153	0.9808113750668069	0.8193563052118028	1.07746334758892	0.9627154876233285	0.8648819039368515	0.9220520334933036	0.9442220544520568	1.1356980221919644	1.0	11.486665044655469	-9.743802848504606	24.98814454406845	1.0678490458427685	0.9630221396870708	0.12842568045164315	0.1016345755260299	408.4257874440186	578679.0681054499	0.06923681458691046	0.026042422339261538	1.8038364211665167e-10	9.743802848504606	-0.10482690615569767	
TPSHPTATVLS(ph)TGSPPSESPSR	ddPTM_K562_Methotrexat_30min_R1	1	TPSHPTATVLSTGSPPSESPSR	22	0	A0A087WV69;P56645;P56645-2	A0A087WV69	PER3	Period circadian protein homolog 3	1	TPSHPTAT(0.003)VLS(0.655)T(0.274)GSPPS(0.031)ES(0.018)PS(0.018)R	162.75	1.2334999999999998e-18	24221000.0	2174.0	1586.3	1899.0	2058.4	1720.9	1647.4	1970.6	2049.7	1961.4	2184.7	True	False	2078.4335630740984	1848.4091125102727	1500.4258513704738	1877.9432678721685	1947.2285138132077	1965.7367347152847	2412.557212915681	1977.6108892189802	1870.2149421118518	1789.0296598241612	1.1617658498061916	1.0331908710177269	0.8386813729616682	1.04969934822475	1.0884271834848145	1.0987725798288284	1.348528348687525	1.1054097836552101	1.0453795060589828	1.0	10.804961590289206	-7.886396914549769	2.4353604026962614	1.138153273593146	1.0069337900545015	0.136161405116218	0.11334228642796837	0.4880925043068954	5.894570622594078	0.04020408207686426	0.04714225027947543	1.2989818574968869e-08	7.886396914549769	-0.13121948353864465	
TPSHPTATVLSTGS(ph)PPSESPSR	ddPTM_K562_Methotrexat_30min_R1	4	TPSHPTATVLSTGSPPSESPSR	22	0	A0A087WV69;P56645;P56645-2	A0A087WV69	PER3	Period circadian protein homolog 3	1	TPSHPTATVLS(0.006)T(0.044)GS(0.758)PPS(0.15)ES(0.021)PS(0.021)R;TPSHPTAT(0.007)VLS(0.289)T(0.289)GS(0.416)PPSESPSR;TPSHPTATVLS(0.004)T(0.015)GS(0.937)PPS(0.042)ES(0.002)PSR;TPSHPTATVLS(0.026)T(0.003)GS(0.809)PPS(0.142)ES(0.015)PS(0.005)R	251.38	2.2670999999999992e-91	118657000.0	5326.22	4923.43	6348.09	5729.6900000000005	4481.7	4692.610000000001	4490.65	5156.06	5657.89	6458.79	True	False	5092.085746235754	5736.943123498989	5015.712660782721	5227.376973617613	5071.122104919899	5599.390469037451	5497.792574941545	4974.718447317374	5394.8559288392125	5289.040544045267	0.9627617152545264	1.0846850342181624	0.9483218400414277	0.9883412558640567	0.958798115213786	1.0586779251184972	1.0394687900684187	0.9405710555420536	1.0200065368969575	1.0	12.368790319309413	-6.7807270384197125	24.999801783583507	0.9945862217022684	1.023723496938983	0.06305535146556496	0.04539622250391637	642.4789262692155	832752.0476609609	0.011747432389254627	0.02452102212293133	1.6568109705908515e-07	6.7807270384197125	0.02913727523671461	
TPSHPTATVLSTGSPPS(ph)ESPSR	ddPTM_K562_Methotrexat_30min_R1	2	TPSHPTATVLSTGSPPSESPSR	22	0	A0A087WV69;P56645;P56645-2	A0A087WV69	PER3	Period circadian protein homolog 3	1	TPSHPTATVLST(0.001)GS(0.001)PPS(0.332)ES(0.332)PS(0.332)R;TPSHPTATVLS(0.002)T(0.093)GS(0.081)PPS(0.394)ES(0.215)PS(0.215)R	163.67	1.0292e-20	370366300.0	6017.0	5906.7	6832.9	6035.6	5998.4	5596.8	5523.200000000001	6682.3	6442.299999999999	6979.6	True	False	5752.4998845523705	6882.681778266672	5398.767667103373	5506.46831887353	6787.294739529979	6678.302389738075	6761.918196679126	6447.279721436303	6142.798879151208	5715.526806293184	1.0064688837113802	1.2042077679853362	0.9445791875490748	0.9634227089636835	1.1875186609319557	1.1684491414483107	1.1830787302464918	1.1280289534006576	1.0747563763304493	1.0	12.480670763994166	-7.768677869073465	24.996768359896556	1.135252616982453	1.0360587547325886	0.22185352653979729	0.08421432032852719	249.78473908023997	862582.879972398	0.02636857204311413	0.030503267998206473	1.703421525365095e-08	7.768677869073465	-0.09919386224986448	
TPSNTPSAEADWS(ph)PGLELHPDYK	ddPTM_K562_Methotrexat_30min_R1	2	TPSNTPSAEADWSPGLELHPDYK	23	0	A0A2R8Y7R5;A0A2R8Y755;A0A2R8Y586;A0A2R8YF51;A0A2R8Y5D2;A0A2R8YCS7;Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3	A0A2R8Y7R5	SAMHD1	Deoxynucleoside triphosphate triphosphohydrolase SAMHD1	1	TPS(0.002)NT(0.028)PS(0.059)AEADWS(0.91)PGLELHPDY(0.001)K;TPSNTPS(0.001)AEADWS(0.998)PGLELHPDYK	89.381	0.0001915	38014000.0	6159.1	4469.1	9009.5	5882.0	4742.4	4133.1	3927.3999999999996	5867.7	6366.7	7813.5	True	False	5888.35333869811	5207.542813288572	7118.52907210231	5366.334192394144	5366.10872445102	4931.763080157671	4808.219424543311	5661.3296651559795	6070.713506650112	6398.39943563697	0.9202853616643449	0.8138821068725843	1.1125484027231023	0.8386994663861459	0.8386642282073807	0.7707807444295178	0.7514722194058592	0.8848040392139703	0.9487862656460996	1.0	12.643495343671614	-5.874704676032108	17.72414927915427	0.8767661009220918	8.15573528643082	0.005736934380602521	0.1047941176445696	1241.6386181621854	175888.60391566154	0.026067472953479918	515.2626957148801	1.3344285465480567e-06	5.874704676032108	7.278969185508728	
TPSS(ph)PCPASK	ddPTM_K562_Methotrexat_30min_R1	1	TPSSPCPASK	10	0	Q9NQS7;Q9NQS7-2	Q9NQS7	INCENP	Inner centromere protein	1	TPS(0.043)S(0.952)PCPAS(0.005)K	110.93	0.0027911999999999998	19846000.0	3337.9	2312.2	5041.6	4073.0	2755.7	2662.0	2365.3	3447.3	3314.5	3982.7	True	False	3191.169912688607	2694.2517493199607	3983.437057540485	3715.926413740452	3118.122851714251	3176.393825307811	2895.778735263099	3326.056505051761	3160.40961845097	3261.3944368479365	0.9784679450710047	0.8261042328642388	1.221390768480732	1.139367373586315	0.9560704514869552	0.9739373408564844	0.8878958958615883	1.0198265096282924	0.9690363062940138	1.0	11.671273217521591														
TPSS(ph)PLQSCTPSLS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	TPSSPLQSCTPSLSPR	16	0	R4GNJ5;A0A590TQL1;Q96AP0-2;Q96AP0	R4GNJ5	ACD	Adrenocortical dysplasia protein homolog	2	T(0.08)PS(0.116)S(0.805)PLQS(0.139)CT(0.229)PS(0.04)LS(0.592)PR;T(0.09)PS(0.139)S(0.763)PLQS(0.007)CT(0.003)PS(0.031)LS(0.967)PR	102.47	0.0029825	49245000.0	3260.3999999999996	2658.3	4081.0	3823.0	3116.0	3073.3999999999996	2833.2	3339.1	3679.6000000000004	3486.4	True	False	3117.0767198927288	3097.5388916258316	3224.4538701647725	3487.8435255904133	3525.8086170271104	3667.2910528553844	3468.617220964531	3221.6619603801037	3508.5361991408026	2854.979176093265	1.0918036621752585	1.0849602398377154	1.129414146752935	1.221670390732291	1.2349682430440014	1.2845246240547652	1.21493608430131	1.1284362377692034	1.2289183152438474	1.0	11.479264507428299	-7.065619875581837	3.6448604132653655	1.199864231267638	1.0903696813117654	0.2174363906756699	0.07426251378051146	0.29841044835186264	7.748618236268148	0.01987498063563675	0.038913451743106765	8.597657183948699e-08	7.065619875581837	-0.1094945499558726	
TPSS(ph)PLQSCTPSLSPR	ddPTM_K562_Methotrexat_30min_R1	1	TPSSPLQSCTPSLSPR	16	0	R4GNJ5;A0A590TQL1;Q96AP0-2;Q96AP0	R4GNJ5	ACD	Adrenocortical dysplasia protein homolog	1	T(0.001)PS(0.115)S(0.884)PLQSCTPSLSPR	130.95	7.8003e-05	27425000.0	884.46	899.58	1072.6	817.68	991.65	930.45	847.67	778.7	921.43	1205.9	True	False	845.580197422501	1048.2203047544538	847.4759179462712	745.9952639300986	1122.0693565709034	1110.2462940487053	1037.781575495908	751.312679628638	878.5929204191511	987.4998245900838	0.8562838963272785	1.0614891047596644	0.8582036136543749	0.7554383761432718	1.1362729679842527	1.124300244316068	1.0509182378100133	0.7608231018577767	0.8897145078317958	1.0	9.94763668168546	-6.039147878520169	18.996964611724966	0.9563301012232739	0.8382767428826217	0.05155703797710354	0.13234527351052483	38381043.69108499	2705603114.910613	0.03551337817437113	34695301.471484706	9.138020362685739e-07	6.039147878520169	-0.11805335834065223	
TPSSS(ph)PPIT(ph)PPASETK	ddPTM_K562_Methotrexat_30min_R1	2	TPSSSPPITPPASETK	16	0	F5GZ90;Q9NZJ0	F5GZ90	DTL	Denticleless protein homolog	2	T(0.009)PS(0.035)S(0.276)S(0.685)PPIT(0.996)PPASETK;T(0.036)PS(0.011)S(0.117)S(0.9)PPIT(0.936)PPASETK	144.73	3.8255e-08	24478000.0	5062.7	4829.8	8767.400000000001	6048.4	4379.0	3596.2	3630.2	4708.6	5145.2	6557.2	True	False	4840.149769905814	5627.842357436874	6927.242553610056	5518.14616274681	4954.915254801579	4291.114753783602	4444.36475912235	4542.995869140112	4906.00077503513	5369.627539432875	0.9013939485301836	1.0480880314524146	1.2900787815800148	1.0276590177294906	0.9227670296336612	0.7991456990770757	0.8276858546490081	0.8460541882612458	0.9136575561353159	1.0	12.390606304781706	-7.772284589058544	3.2970038856812547	0.8653455501879911	1.086604754076806	0.43244744054813145	0.10279098257053039	0.21228178168323958	4.807894953639071	0.03366563267898821	0.04148099482928332	1.6893335645828554e-08	7.772284589058544	0.22125920388881493	
TPSSS(ph)PPITPPASETK	ddPTM_K562_Methotrexat_30min_R1	2	TPSSSPPITPPASETK	16	0	F5GZ90;Q9NZJ0	F5GZ90	DTL	Denticleless protein homolog	1	T(0.02)PS(0.03)S(0.073)S(0.877)PPITPPASETK;TPSS(0.014)S(0.985)PPITPPASETK	166.9	7.383e-08	48518000.0	7216.099999999999	4718.0	9798.8	7603.700000000001	4793.6	4559.3	4375.1	5446.6	6031.9	7489.3	True	False	6898.8888843141685	5497.569307711949	7742.165788525007	6937.095426505837	5424.042421880987	5440.320198244144	5356.327546040491	5255.039990837732	5751.478285573817	6132.915197199199	1.1248955288774867	0.8964039336827285	1.2623957024647474	1.1311252811181693	0.8844150371356932	0.8870692033584043	0.8733738155203317	0.8568584142884647	0.9378049590838011	1.0	12.582357286932714	-7.764610202219668	24.998279153524706	0.896793261850795	1.1002329425732502	0.5240422746559728	0.09172254556678466	65.28651764080317	514709.576390981	0.028179248990990093	0.0333093126407672	1.7194509752119367e-08	7.764610202219668	0.20343968072245522	
TPT(ph)PEPAEVETR	ddPTM_K562_Methotrexat_30min_R1	1	TPTPEPAEVETR	12	0	F8W6G1;Q9UHY1	F8W6G1	NRBP1	Nuclear receptor-binding protein	1	T(0.222)PT(0.778)PEPAEVETR	137.95	1.4146e-05	103500000.0	946.22	936.09	1036.4	888.52	766.67	814.27	616.78	1037.6	930.63	1054.6	True	False	904.6253017718374	1090.762961690564	818.8738032440015	810.6248311162943	867.500543137412	971.6161533183287	755.1086155394977	1001.1070198827218	887.3652144272221	863.6017207170605	1.0475028940663926	1.26303935659703	0.9482077022311618	0.938655877669189	1.0045146070541804	1.1250743601015318	0.8743713652081663	1.1592230490827284	1.0275167280704702	1.0	9.754222307692226	-6.772468409670734	24.99999579831289	1.0119475119521903	1.1552711545021321	0.28132289753999495	0.09301495629599138	236.3540508443078	535756.9297835014	0.023679330843563242	0.050035331580724	1.6886186841654014e-07	6.772468409670734	0.1433236425499418	
TPT(ph)SPLK	ddPTM_K562_Methotrexat_30min_R1	2	TPTSPLK	7	0	O60264	O60264	SMARCA5	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5	1	T(0.022)PT(0.921)S(0.057)PLK;T(0.002)PT(0.992)S(0.006)PLK	104.01	0.027479000000000003	771680000.0	14206.9	10691.0	20282.8	16387.4	10307.099999999999	9032.900000000001	9374.5	12238.5	12047.6	16733.5	True	False	13582.381686861732	12457.506034071313	16025.717460862055	14950.742085079872	11662.664312118146	10778.380084381273	11476.970259047022	11808.06501815217	11487.509705611685	13702.900999069725	0.9912048323040373	0.90911450319294	1.1695127522230528	1.091064007985963	0.8511091419918974	0.7865765128940949	0.8375577010901692	0.8617200853274651	0.8383268408924183	1.0	13.742193733605054	-7.771151364503098	24.927334713244566	0.8505862176964796	1.0400939666761355	0.5325139261159706	0.0810918850863898	147.8030929309808	379358.6522124979	0.02577305652833128	0.02958472147505292	1.6937473763855202e-08	7.771151364503098	0.18950774897965594	
TPTSS(ph)PASSPLVAK	ddPTM_K562_Methotrexat_30min_R1	2	TPTSSPASSPLVAK	14	0	Q14684-2;Q14684	Q14684-2	RRP1B	Ribosomal RNA processing protein 1 homolog B	1	T(0.082)PT(0.002)S(0.02)S(0.871)PAS(0.024)S(0.002)PLVAK;TPT(0.05)S(0.035)S(0.769)PAS(0.111)S(0.035)PLVAK	176.89	0.00016069	201444000.0	9827.099999999999	6774.0	8626.3	10426.8	6676.9	6440.2	6218.2	8364.6	8607.2	11148.3	True	False	9395.112450637289	7893.288361687314	6815.757515364458	9512.698632651352	7555.029382229879	7684.677503286015	7612.78963836004	8070.41227689959	8207.05315068071	9129.234840764271	1.0291237562085498	0.8646166408647795	0.7465858458290974	1.0420039355516217	0.8275643593365373	0.8417657818344256	0.8338913141293144	0.8840184766485819	0.8989858727299034	1.0	13.156278231652038	-10.267567519758062	2.47222262710256	0.9999644291654053	0.878987235394029	0.13980524353046286	0.08540354084594741	2.7982410530560604	22.986474442228033	0.08035347379833135	0.021756308918282147	5.400481469584261e-11	10.267567519758062	-0.12097719377137628	
TPTSSPAS(ph)SPLVAK	ddPTM_K562_Methotrexat_30min_R1	1	TPTSSPASSPLVAK	14	0	Q14684-2;Q14684	Q14684-2	RRP1B	Ribosomal RNA processing protein 1 homolog B	1	TPTSS(0.004)PAS(0.939)S(0.057)PLVAK	183.28	3.1596999999999996e-05	28905000.0	1393.7	1145.2	1357.7	1276.6	968.44	822.39	716.79	982.57	1205.0	1607.7	True	False	1332.43461676926	1334.4248349283016	1072.737324068295	1164.6824600493646	1095.806834747668	981.3052283977806	877.5484038596522	948.0124561740222	1148.9798130135532	1316.529951068478	1.012080747337251	1.0135924624011023	0.8148218148760503	0.8846608154293215	0.8323447817182783	0.745372505655011	0.6665616708130686	0.7200842300660368	0.8727335159227153	1.0	10.362524627744842	-6.748071809798802	0.9948536807831062	0.7842105381861473	1.0746433019652584	0.3766452968958106	0.09338057605334642	0.9281446432625087	1.2362520753417978	0.03294107381332252	0.24576749860655017	1.7861922068167538e-07	6.748071809798802	0.2904327637791111	
TPTSSPASS(ph)PLVAK	ddPTM_K562_Methotrexat_30min_R1	1	TPTSSPASSPLVAK	14	0	Q14684-2;Q14684	Q14684-2	RRP1B	Ribosomal RNA processing protein 1 homolog B	1	T(0.004)PT(0.002)SS(0.016)PAS(0.33)S(0.648)PLVAK	191.01	3.1048999999999995e-99	0.0	2933.3	1918.2	2941.3	2640.6	2008.1	1413.2	1702.4	2117.5	2205.4	2761.8	True	False	2804.3556442342488	2235.1499461748767	2323.9613252427457	2409.1026977959823	2272.200347834448	1686.2808992956432	2084.2065357087467	2043.0263247895734	2102.8714353693686	2261.611257610826	1.2399812897981324	0.9882997967281507	1.0275688703892403	1.0652152042880112	1.0046821000682533	0.7456104109939018	0.9215582601540946	0.9033499094569565	0.9298111814277265	1.0	11.143135254257436	-8.017896875806994	14.668064832662388	0.8931182527607667	1.0655675212136007	0.4942002801735913	0.08560178306750023	3.133813995586628	2568.357311793618	0.027165313972024697	0.028058432017017656	9.596284703842654e-09	8.017896875806994	0.17244926845283393	
TPVAS(ph)THSISSAATPDR	ddPTM_K562_Methotrexat_30min_R1	1	TPVASTHSISSAATPDR	17	0	J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448;P27448-6;P27448-7;H0YIY6;A2SY06	J3KNR0;P27448-6	MARK3	MAP/microtubule affinity-regulating kinase 3	1	T(0.032)PVAS(0.932)T(0.031)HS(0.002)IS(0.002)SAATPDR	106.28	0.0096648	0.0	1757.0	1370.9	2057.6	2074.6	1357.6	1438.7	1503.2	1584.6	1346.8	2257.1	True	False	1679.764383772397	1597.417923684255	1625.7378787677133	1892.7230390242912	1536.1481959165615	1716.7084133998308	1840.3308649420744	1528.8687198401694	1284.1875619640273	1848.3173182538178	0.9088073607184183	0.864255237944425	0.8795772580346839	1.0240249443815337	0.8311063153202636	0.9287952866349143	0.9956790680729602	0.8271678811539542	0.6947873881186444	1.0	10.851996743890101	-9.409847782494836	9.538062539113579	0.8188264390938822	0.9162399910380223	0.12845159733800615	0.08811785058192037	0.5797963579761928	44.80478096080861	0.04612052472407086	0.02208430230618224	3.891815267883791e-10	9.409847782494836	0.09741355194414014	
TPVQYSQQQNS(ph)PQK	ddPTM_K562_Methotrexat_30min_R1	3	TPVQYSQQQNSPQK	14	0	P46013	P46013	MKI67	Antigen KI-67	1	TPVQYSQQQNS(1)PQK;TPVQYS(0.002)QQQNS(0.998)PQK;TPVQYSQQQNS(1)PQK	200.0	1.8836e-12	45409900.0	8776.4	5818.59	12341.6	7495.2	6309.1	6081.2	5331.360000000001	7004.3	7742.3	9520.800000000001	True	False	8390.599964564639	6780.0130983805975	9751.266817943042	6838.10745304872	7138.857235457558	7256.305834132938	6527.053193266085	6757.954798924968	7382.362162900272	7796.490861561721	1.0762021162536077	0.8696236831120312	1.250725100701235	0.8770750295831135	0.9156500484921454	0.930714338409347	0.8371783292206214	0.8667944231478617	0.9468826801679218	1.0	12.92860920917883														
TPVSGS(ph)LKSPVPR	ddPTM_K562_Methotrexat_30min_R1	1	TPVSGSLKSPVPR	13	1	H7C477;H0Y7U4;A0A0C4DG98;Q8NI27-2;Q8NI27	H7C477	THOC2	THO complex subunit 2	1	T(0.001)PVS(0.005)GS(0.497)LKS(0.497)PVPR	118.52	0.0031486	57941000.0	1736.1	1229.1	2309.2	1638.1	1537.1	1240.4	1122.2	1777.8	1401.1	1821.1	True	False	1659.7831227474444	1432.1878838721398	1824.5304770851485	1494.490316314323	1739.255592179837	1480.089744895496	1373.8819163371454	1715.2737663333678	1335.9631668160073	1491.2811431802002	1.1129914237418097	0.9603741658115235	1.223465129582665	1.0021519571603241	1.1662828301247237	0.9924954470618209	0.9212762614347167	1.1502014721888705	0.8958492990577398	1.0	10.542336551429182	-8.302884762118614	23.82270046749521	0.9969340157791403	1.0878771227422226	0.2227782752639349	0.09393100356207097	487.97960126371163	280487.47355414485	0.031182750105455778	0.02750097203711971	4.978691745634826e-09	8.302884762118614	0.09094310696308228	
TQAPAVATT(ph)	ddPTM_K562_Methotrexat_30min_R1	1	TQAPAVATT	9	0	H0YEN5;P15880;E9PQD7	H0YEN5	RPS2	40S ribosomal protein S2	1	TQAPAVAT(0.116)T(0.884)	81.017	0.027256	3719700.0	4157.1	3862.2	4903.6	4755.2	3718.3	3925.8	4044.2	4008.0	4001.1	5008.3	True	False	3974.358861570994	4500.362903824732	3874.4013716589025	4338.318998924281	4207.321624098815	4684.405289028329	4951.214797763928	3867.036368243973	3815.0897343141287	4101.248338580743	0.9690607672263857	1.0973153860227114	0.9446883123882369	1.0578045123757558	1.0258636582721006	1.1421901095239189	1.2072457917721022	0.9428925168628486	0.9302264626175647	1.0	12.001847388968889														
TQDPS(ph)S(ph)PGTTPPQAR	ddPTM_K562_Methotrexat_30min_R1	2	TQDPSSPGTTPPQAR	15	0	Q13112	Q13112	CHAF1B	Chromatin assembly factor 1 subunit B	2	T(0.052)QDPS(0.904)S(0.858)PGT(0.055)T(0.131)PPQAR;TQDPS(0.901)S(0.628)PGT(0.115)T(0.356)PPQAR	124.16	0.00094374	60441600.0	4669.299999999999	4703.0	6176.400000000001	5496.4	4278.0	4242.7	3716.0	4823.5	4468.9	5377.700000000001	True	False	4464.043162861953	5480.090812668355	4880.058045500047	5014.539145711521	4840.63198448074	5062.541729013318	4549.4075932176365	4653.854771014174	4261.141814420138	4403.74641902156	1.0136921471181781	1.244415615984978	1.1081605481235488	1.1386984327825282	1.0992077026897134	1.1495988295661521	1.0330766489112333	1.0567944491336503	0.9676174350127303	1.0	12.10451568123173	-9.085815444097985	1.2803133541286078	0.9910192734283323	1.1317981855742218	0.46721450333216474	0.05776910200215903	0.3904841514723853	1.1827487744934653	0.04204317692424126	0.018274065245639817	8.207002314520299e-10	9.085815444097985	0.14077891214588956	
TQDPSS(ph)PGT(ph)TPPQAR	ddPTM_K562_Methotrexat_30min_R1	1	TQDPSSPGTTPPQAR	15	0	Q13112	Q13112	CHAF1B	Chromatin assembly factor 1 subunit B	2	T(0.03)QDPS(0.176)S(0.943)PGT(0.493)T(0.358)PPQAR	114.54	0.017352	53548000.0	3940.2	3312.0	4200.0	4500.7	3995.3	3474.6	3156.7	4003.7	4239.3	4099.4	True	False	3766.9935258622663	3859.251705625681	3318.477396395992	4106.130618787539	4520.7519793351785	4146.017274761279	3864.670330869244	3862.8876016812374	4042.2158683056887	3356.9589360018167	1.1221446546345921	1.149627320202523	0.9885367857220032	1.2231697488912379	1.3466807505007656	1.2350515314015849	1.1512414672167894	1.1507104124073644	1.204130269499222	1.0	11.71293917403926	-7.296343926014222	24.91995112920746	1.200693206687342	1.0930552881468767	0.1925355048429025	0.09121518433315046	857.5736418364053	612258.6464991132	0.025975192317156424	0.03852924323715211	5.054242484548464e-08	7.296343926014222	-0.10763791854046523	
TQDPSS(ph)PGTT(ph)PPQAR	ddPTM_K562_Methotrexat_30min_R1	1	TQDPSSPGTTPPQAR	15	0	Q13112	Q13112	CHAF1B	Chromatin assembly factor 1 subunit B	2	T(0.002)QDPS(0.471)S(0.889)PGT(0.183)T(0.455)PPQAR	116.0	0.015581999999999999	5063800.0	2735.0	2611.3	3227.8	2779.2	2184.1	2159.9	2139.2	2159.1	2582.9	2670.6	True	False	2614.7726747965326	3042.772940489236	2550.3288904969	2535.5518509863646	2471.3474327499707	2577.27010641711	2618.970054739279	2083.163229210471	2462.8215427657306	2186.928461356895	1.195637041174259	1.3913454391650868	1.1661693263228787	1.1594123428313536	1.1300540810633588	1.178488529440979	1.197556344899513	0.9525520683552483	1.1261555127585912	1.0	11.094690312485818	-7.624591448514655	0.26036459426357855	0.9835605975545514	1.3915642551264191	0.49955941413956884	0.07947207179353204	3.6998945941153396	0.39130677135236175	0.12655924182746378	0.48008694672869273	2.3736055647649573e-08	7.624591448514655	0.40800365757186774	
TQDPSSPGT(ph)TPPQAR	ddPTM_K562_Methotrexat_30min_R1	2	TQDPSSPGTTPPQAR	15	0	Q13112	Q13112	CHAF1B	Chromatin assembly factor 1 subunit B	1	TQDPS(0.131)S(0.056)PGT(0.781)T(0.032)PPQAR;TQDPS(0.001)S(0.377)PGT(0.559)T(0.063)PPQAR	166.52	2.2876e-05	91287800.0	5289.6	5081.299999999999	6617.700000000001	6229.7	5446.5	4675.1	4962.1	5124.6	5126.700000000001	6438.799999999999	True	False	5057.075517588207	5920.898457667809	5228.7352062213695	5683.551873233215	6162.810215865904	5578.496909352578	6074.977238510556	4944.364913349067	4888.360835997165	5272.670926752328	0.9591107785486404	1.1229410179244304	0.9916672743015236	1.0779265294930829	1.1688213244253898	1.058002099286826	1.152163167947294	0.937734401034301	0.9271128245828387	1.0	12.364318243989901	-9.280327744547066	24.880774894898472	0.9493176856798542	1.0773559550845444	0.4274463637009176	0.06398072366645416	723.5975145626859	953155.7496103662	0.03406355161743989	0.01640981288657183	5.244115586091607e-10	9.280327744547066	0.1280382694046902	
TQEISRPNS(ph)PSEGEGESSDSR	ddPTM_K562_Methotrexat_30min_R1	2	TQEISRPNSPSEGEGESSDSR	21	1	A0A590UJ84;Q9P2R6;B1AKN3;Q9P2R6-2	A0A590UJ84	RERE	Arginine-glutamic acid dipeptide repeats protein	1	TQEISRPNS(0.748)PS(0.231)EGEGES(0.016)S(0.005)DS(0.001)R;TQEISRPNS(0.58)PS(0.4)EGEGES(0.011)S(0.008)DS(0.001)R	104.26	6.2638e-05	16455000.0	1948.4299999999998	1716.98	2912.2	2522.8	1895.11	1535.97	1948.56	2478.05	1724.96	2503.7	True	False	1862.7793501842082	2000.681761330069	2300.9690175677165	2301.630040899683	2144.350182353737	1832.774464259219	2385.574181873025	2390.8955769278896	1644.7669861044474	2050.255668650962	0.9085595414594754	0.975820621750305	1.122283943778446	1.1226063539744395	1.0458940390418177	0.8939248369278538	1.1635496091288446	1.166145087895825	0.80222530841077	1.0	11.001588110927356	-6.541117014437754	7.297826657379835	1.0481762033110664	0.9244814397871327	0.11701182824013034	0.11186346496414938	0.2607262244391146	66.12481183458583	0.028255717728398	0.07969032320859384	2.876623245313356e-07	6.541117014437754	-0.12369476352393372	
TQLSQGRSS(ph)PQLDPLR	ddPTM_K562_Methotrexat_30min_R1	2	TQLSQGRSSPQLDPLR	16	1	Q8ND56;Q8ND56-2	Q8ND56	LSM14A	Protein LSM14 homolog A	1	T(0.005)QLS(0.038)QGRS(0.139)S(0.819)PQLDPLR;T(0.002)QLS(0.076)QGRS(0.343)S(0.579)PQLDPLR	105.0	0.002722	31971000.0	2033.8000000000002	1666.7	2659.3999999999996	2484.2	2107.09	1884.96	1940.96	1939.43	1937.5300000000002	2361.46	True	False	1944.3965872033586	1942.0938459439396	2101.2282828513094	2266.414042969319	2384.2092679241523	2249.2018425815972	2376.2696884100374	1871.2191476206108	1847.454653201784	1933.7767109847425	1.0054917799755734	1.0043009800004064	1.0865930233389227	1.1720143437942152	1.2329289386829128	1.1631135227790752	1.2288232012060807	0.967650058557032	0.9553608969988058	1.0	10.917205504216982	-9.286949012608897	24.480891352682264	0.9711290450190803	1.128413389933691	0.4617440344723024	0.07580738933722549	622.5467744145938	597436.4594517905	0.04743188335112451	0.022802177748243786	5.164770015623723e-10	9.286949012608897	0.15728434491461074	
TQLWAS(ph)EPGTPPLPTSLPSQNPILK	ddPTM_K562_Methotrexat_30min_R1	1	TQLWASEPGTPPLPTSLPSQNPILK	25	0	H7C3A1;Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5	H7C3A1	SRRT	Serrate RNA effector molecule homolog	1	T(0.015)QLWAS(0.532)EPGT(0.453)PPLPTSLPSQNPILK	90.742	6.2783e-05	73873000.0	2732.6	1567.6	3340.8	2424.0	1793.7	1514.2	1688.1	2583.7	2626.1	3031.6	True	False	2612.4781759228536	1826.6192553559245	2639.6117347332674	2211.4916835027893	2029.6029898464467	1806.7977198651731	2066.699396692866	2492.8298065448976	2504.0131841949315	2482.547863195372	1.0523374854735907	0.7357841040795969	1.0632672078014775	0.890815325774345	0.8175483824243677	0.7277997522833587	0.8324912592149367	1.0041416898751314	1.0086464882783492	1.0	11.277605817653981	-9.271732862636844	23.740602665087767	1.0047956062303856	0.8690517435699606	0.23709086291888437	0.10654899122143878	534.2116728632312	1232077.4387420136	0.05774283392958061	0.028277786980633764	5.348932745631091e-10	9.271732862636844	-0.13574386266042493	
TQLWASEPGT(ph)PPLPTSLPSQNPILK	ddPTM_K562_Methotrexat_30min_R1	1	TQLWASEPGTPPLPTSLPSQNPILK	25	0	H7C3A1;Q9BXP5-5;Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5	H7C3A1	SRRT	Serrate RNA effector molecule homolog	1	T(0.002)QLWAS(0.035)EPGT(0.963)PPLPTSLPSQNPILK	147.08	7.361e-22	71241000.0	5171.2	3182.4	6578.9	5136.3	3679.6	3042.1	3385.8	4567.5	4519.1	5960.2	True	False	4943.880239820045	3708.237508449028	5198.078795987999	4686.008553620205	4163.5318957679565	3629.9427708373014	4145.151837760032	4406.858436116353	4309.0080273772155	4880.750024481148	1.0129345315826963	0.7597679639090378	1.0650163950038773	0.9601000932471142	0.8530516569962142	0.7437264257808789	0.8492858304499391	0.9029059906801573	0.8828577586977091	1.0	12.25288714832227	-5.916609082835703	16.71230689057637	0.888144538590326	4.102127782233056	0.13027870758159188	0.09449729945063913	28847549.940807827	67810874.14049758	0.02413535582866098	3389083571.4249806	1.2116883077551682e-06	5.916609082835703	3.2139832436427302	
TQMAEVLPS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	5	TQMAEVLPSPR	11	0	P11388;P11388-2;P11388-3;P11388-4	P11388	TOP2A	DNA topoisomerase 2-alpha	1	TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR	123.1	0.0020394000000000002	630498000.0	16896.699999999997	15361.3	19645.1	18294.2	14951.600000000002	14818.0	14700.500000000002	17314.800000000003	18466.6	20685.0	True	False	16153.941299537322	17899.49372754463	15521.861976175918	16690.37588957784	16917.997470584898	17681.368784151462	17997.46133587078	16705.828669877934	17608.09179667724	16938.74605825184	0.9536680722400821	1.0567189369265473	0.9163524810394288	0.9853371573185016	0.998775081248896	1.043841658842146	1.062502576871868	0.9862494314766329	1.0395156604936127	1.0	14.048039458322254	-8.013277507822215	3.6092861784728383	1.0276587299077513	0.979756041417319	0.25991012490275245	0.038445928400839734	0.335884769032436	9.400982620262967	0.012656190593188812	0.013567130444729425	9.698900236590317e-09	8.013277507822215	-0.04790268849043233	
TQPDGTSVPGEPAS(ph)PISQR	ddPTM_K562_Methotrexat_30min_R1	5	TQPDGTSVPGEPASPISQR	19	0	A0A087WY61;Q14980-5;Q14980-2;Q14980;H0YFY6	A0A087WY61	NUMA1	Nuclear mitotic apparatus protein 1	1	TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(0.998)PIS(0.002)QR;TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(1)PISQR	270.37	7.311099999999998e-117	934552000.0	11683.1	10002.199999999999	13981.5	10903.4	10096.199999999999	9594.7	9022.9	10811.8	11445.099999999999	12055.0	True	False	11169.524912948944	11654.893541669444	11046.97421850251	9947.515850620586	11424.027265477898	11448.739983351188	11046.51500883838	10431.542865813417	10913.019799104912	9871.722684661636	1.1314666416129975	1.180634212889554	1.1190523246430881	1.0076778054226254	1.1572475879238568	1.1597509724558888	1.119005806960329	1.0567094719973862	1.105482816698367	1.0	13.269086151689644	-15.999999999999616	0.15133794565514117	0.5728009712024461	1.1512231080503703	0.38443052736172667	0.046650739484085005	153.4337817955979	1.3715732612715195	19.548909951951835	0.24782649267946788	1.0000000000008835e-16	15.999999999999616	0.5784221368479242	
TQPDVMS(ph)QNAR	ddPTM_K562_Methotrexat_30min_R1	1	TQPDVMSQNAR	11	0	J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2;Q96Q15	J3KRA9	SMG1	Serine/threonine-protein kinase SMG1	1	T(0.001)QPDVMS(0.999)QNAR	83.87700000000001	0.020857	2952400.0	2221.0	1860.0	2099.3	2269.2	1501.2	1734.4	1698.8	1765.0	1940.9	2547.4	True	False	2123.3674993503105	2167.333385405729	1658.6856186319303	2070.262759160284	1698.6341129271814	2069.5482534236926	2079.7991440683863	1702.9239495884763	1850.6679826373472	2086.0411751893034	1.0178933784265403	1.0389696096046852	0.7951356082323775	0.9924361914727846	0.8142859945096885	0.9920936739112476	0.9970077143274266	0.8163424432089361	0.8871675231767193	1.0	11.026551919343902	-6.712084959499488	24.99998423816536	0.9105559643988	1.028432090753801	0.2626324891973536	0.07814220014772351	143.89723390591612	72887.56113429593	0.019163254772405266	0.050701020420602455	1.940506226062386e-07	6.712084959499488	0.11787612635500089	
TQPSSGVDSAVGTLPAT(ph)SPQSTSVQAK	ddPTM_K562_Methotrexat_30min_R1	2	TQPSSGVDSAVGTLPATSPQSTSVQAK	27	0	Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0	Q13428	TCOF1	Treacle protein	1	TQPSSGVDSAVGTLPAT(0.465)S(0.465)PQS(0.025)T(0.036)S(0.008)VQAK;TQPSSGVDSAVGTLPAT(0.413)S(0.413)PQS(0.058)T(0.089)S(0.027)VQAK	126.68	1.4081e-14	15892000.0	3320.7	2648.37	4879.5	4147.7	2719.5	2702.8	2363.73	3293.2	3513.6000000000004	4742.2	True	False	3174.7260040939095	3085.9681279069714	3855.359632312914	3784.077580719682	3077.1619172032188	3225.0778478745156	2893.8566227977185	3177.3762893964713	3350.2535029082333	3883.341627142466	0.8175242636146881	0.7946682069735294	0.992794351484821	0.9744384975741042	0.7924005180732786	0.8304903759517213	0.7451975387823774	0.818206739059042	0.8627243813657202	1.0	11.92308291493305	-7.789393336264459	24.999714637621942	0.8270476702966376	0.8946957283958188	0.07272592636628084	0.08433174754922347	470.1102586991625	420425.0993529828	0.026856347614464766	0.030458302781599958	1.6240771786388557e-08	7.789393336264459	0.06764805809918117	
TQPSSGVDSAVGTLPATS(ph)PQSTSVQAK	ddPTM_K562_Methotrexat_30min_R1	1	TQPSSGVDSAVGTLPATSPQSTSVQAK	27	0	Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0	Q13428	TCOF1	Treacle protein	1	TQPSSGVDSAVGTLPAT(0.35)S(0.562)PQS(0.028)T(0.046)S(0.013)VQAK	148.7	5.253e-28	14621000.0	4220.8	2878.7	5674.1	4909.5	3310.1	2771.0	3153.1	3898.1	4087.2	5069.5	True	False	4035.2586858432182	3354.3562454663825	4483.183951164403	4479.091757490483	3745.4361691981517	3306.4565326551256	3860.2629392288827	3761.001613535887	3897.1869641070452	4151.364425540616	0.9720319085977912	0.8080129570965232	1.0799302329572222	1.0789444862834918	0.9022181107866477	0.7964746511562975	0.929878118018072	0.9059675875230121	0.9387725491239015	1.0	12.01936986845689	-7.903989614169799	19.62995831299754	0.9025157528759182	0.9803778525758068	0.14222999517700052	0.08498830703873576	6.510079746172498	1318.5571007162882	0.027695273614808728	0.031403622244696915	1.2474133448505649e-08	7.903989614169799	0.07786209969988855	
TQQS(ph)PISNGSPELGIK	ddPTM_K562_Methotrexat_30min_R1	1	TQQSPISNGSPELGIK	16	0	Q15723-2;Q15723-3;Q15723-1;Q15723	Q15723-2	ELF2	ETS-related transcription factor Elf-2	1	T(0.109)QQS(0.879)PIS(0.009)NGS(0.003)PELGIK	100.69	0.0021585999999999997	7227600.0	1377.9	1358.7	2483.2	1933.6	1261.9	1003.0	1220.2	1540.5	1638.7	2166.3	True	False	1317.3291658508751	1583.2020810487977	1962.0102549358396	1764.0842901076694	1427.861968493745	1196.81555476474	1493.8609109914316	1486.3197418362874	1562.5171946766045	1773.9620781238075	0.7425915029954415	0.8924666995831371	1.106004620465685	0.99443179302537	0.8048999390132918	0.674656786367455	0.8421041968221673	0.8378531650508907	0.8808064241875829	1.0	10.792759454229202	-6.25972554110178	21.961451344639833	0.8862381773330983	0.7425912476010741	0.13384280760492628	0.11343928480562572	68.65354290451961	879263.4668791412	0.031561350980398174	0.19383514525950216	5.498882741990723e-07	6.25972554110178	-0.1436469297320242	
TQQSPIS(ph)NGSPELGIK	ddPTM_K562_Methotrexat_30min_R1	1	TQQSPISNGSPELGIK	16	0	Q15723-2;Q15723-3;Q15723-1;Q15723	Q15723-2	ELF2	ETS-related transcription factor Elf-2	1	T(0.006)QQS(0.312)PIS(0.682)NGS(0.001)PELGIK	143.46	2.809e-07	7196700.0	1492.8	961.31	1721.4	1704.3	1065.2	983.95	977.73	1164.2	1026.6	1601.4	True	False	1427.1782994282494	1120.1501380238606	1360.1016643228713	1554.8866650964528	1205.2924707500895	1174.0844118751395	1197.0108412585246	1123.2544261251587	978.8735900744512	1311.3709421167264	1.0883101444390666	0.854182521549387	1.0371601357335911	1.1856955306533328	0.9191087220558569	0.8953106814918529	0.9127934765173236	0.8565497297904721	0.7464505721732857	1.0	10.356860117175515	-7.982301884451975	24.955696071315128	0.8787264187766427	1.0307620317329063	0.3799446722904636	0.09626475073499142	270.78028298977085	381819.0934453609	0.030589685522859678	0.03467866311380643	1.04159315104713e-08	7.982301884451975	0.15203561295626355	
TQQT(ph)IWKET(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TQQTIWKETR	10	1	Q86XR7;Q86XR7-2	Q86XR7	TICAM2	TIR domain-containing adapter molecule 2	2	TQQT(1)IWKET(1)R	77.67399999999999	0.027360000000000002	20363000.0	1302.9	990.8	1694.5	1400.8	1179.8	1056.9	1000.8	1486.8	1605.2	1397.9	True	False	1245.6260760484097	1154.512859279567	1338.8476067126207	1277.9940388823047	1334.9643794507654	1261.1309669300629	1225.2548760205082	1434.508401273737	1530.5746023646097	1144.7267640720443	1.08814270369415	1.0085488480873037	1.1695783209873123	1.116418414413759	1.166186046617801	1.1016873253176533	1.0703470159656334	1.253144808260511	1.3370654468844776	1.0	10.160787565813969	-9.262229929166756	24.99285306741817	1.2213288486772809	1.104813267760541	0.16812424252689406	0.0906818223133323	98.34408898757178	3108968.7579738246	0.04447755966114776	0.023335562017566553	5.467264320777558e-10	9.262229929166756	-0.11651558091673997	
TQS(ph)ASPPPKER	ddPTM_K562_Methotrexat_30min_R1	1	TQSASPPPKER	11	1	Q9UN81	Q9UN81	L1RE1	LINE-1 retrotransposable element ORF1 protein	1	T(0.134)QS(0.678)AS(0.188)PPPKER	79.46600000000001	0.023515	6740200.0	3063.5	2112.1	4495.0	3743.6	2292.6	2557.9	1914.2	2957.6	2824.2	4156.3	True	False	2928.8322081313277	2461.0886254384063	3551.5609278095194	3415.404400313961	2594.1170845302804	3052.177973611891	2343.5080772166843	2853.579531616361	2692.90355843392	3403.553794629546	0.8605217912972966	0.7230937937051997	1.0434860566662745	1.0034818329309543	0.7621789579537505	0.8967620780455742	0.6885473885896842	0.8384117612946247	0.7912034658253505	1.0	11.732826196988453	-7.780812723729741	24.99837334026452	0.8177516224312356	0.9041665075778926	0.09971046829960761	0.11150628762935107	542.880159303059	700501.2962468939	0.03509426385290924	0.03985202699255562	1.6564841178126385e-08	7.780812723729741	0.08641488514665707	
TQS(ph)PGGCSAEAVLAR	ddPTM_K562_Methotrexat_30min_R1	1	TQSPGGCSAEAVLAR	15	0	K7ERG7;K7ESM2;K7ELS4;K7EJA3;Q96MH2	K7ERG7	HEXIM2	Protein HEXIM2	1	T(0.014)QS(0.979)PGGCS(0.008)AEAVLAR	87.669	0.027067	0.0	961.04	802.31	1107.6	1011.2	757.08	876.81	954.62	898.89	922.7	1086.4	True	False	918.7938323168042	934.8780905617575	875.1298962495717	922.5496659892818	856.6492900445712	1046.2411232036602	1168.7178354783155	867.2755292042975	879.803878396353	889.6424325687595	1.0327675464668122	1.0508470103684064	0.9836872255774893	1.0369892804297853	0.9629141536910243	1.1760243047116543	1.3136938984618256	0.9748585470458286	0.9889410016741236	1.0	9.797081790557124	-8.253067757804201	24.894035303773236	1.103069107289869	1.0151744008834707	0.1289392907837721	0.0977508067159272	1218.2452855502409	3622603.062909279	0.03478414722259889	0.034207247494017615	5.583830700693088e-09	8.253067757804201	-0.0878947064063984	
TQSEESRPQSLQQPATSTTETPAS(ph)PAHTTPQTQSTSGR	ddPTM_K562_Methotrexat_30min_R1	2	TQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSGR	38	1	B8ZZU6;E9PBF9;P15336-5;P15336;P15336-4;F5H629;P15336-2	B8ZZU6	ATF2	Cyclic AMP-dependent transcription factor ATF-2	1	TQSEESRPQSLQQPATS(0.001)T(0.001)T(0.001)ET(0.002)PAS(0.967)PAHT(0.025)T(0.003)PQT(0.001)QSTSGR;TQSEESRPQSLQQPAT(0.001)S(0.005)T(0.005)T(0.005)ET(0.015)PAS(0.95)PAHT(0.012)T(0.006)PQT(0.001)QSTSGR	86.48299999999999	8.763500000000001e-10	368050000.0	2724.8	2137.3	3622.8	2992.8	2424.27	2397.5	2403.12	2588.5	3008.8	3414.8	True	False	2605.021054583399	2490.4524971116466	2862.423788491287	2730.425870621758	2743.103997432708	2860.7829437173095	2942.0808329960078	2497.4609878242322	2868.9215447262877	2796.346629911452	0.9315801648903191	0.8906093652597383	1.023629816802049	0.9764261130631786	0.980959931108244	1.0230430351933508	1.052115929236273	0.8931156678180902	1.0259534758811835	1.0	11.449327490246118	-6.757914671888454	24.999619576872195	0.9946925939936184	0.9110947469279634	0.3998662892235886	0.04198022802947084	87.01430676509698	617138.1078612136	0.010632730411651184	0.025893673064208554	1.746165197441684e-07	6.757914671888454	-0.08359784706565498	
TQSEESRPQSLQQPATSTTETPAS(ph)PAHTTPQTQSTSGRR	ddPTM_K562_Methotrexat_30min_R1	3	TQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSGRR	39	2	B8ZZU6;E9PBF9;P15336-5;P15336;P15336-4;F5H629;P15336-2	B8ZZU6	ATF2	Cyclic AMP-dependent transcription factor ATF-2	1	TQS(0.001)EES(0.002)RPQS(0.004)LQQPAT(0.019)S(0.054)T(0.054)T(0.054)ET(0.157)PAS(0.592)PAHT(0.023)T(0.008)PQT(0.019)QS(0.01)T(0.002)S(0.002)GRR;TQSEESRPQSLQQPAT(0.002)S(0.007)T(0.007)T(0.007)ET(0.147)PAS(0.742)PAHT(0.058)T(0.012)PQT(0.005)QS(0.005)T(0.005)S(0.005)GRR;TQSEESRPQSLQQPAT(0.015)S(0.005)T(0.005)T(0.005)ET(0.052)PAS(0.787)PAHT(0.043)T(0.014)PQT(0.014)QS(0.02)T(0.02)S(0.02)GRR	80.166	1.0615e-09	84457000.0	1483.06	1553.18	2237.44	1930.57	1804.61	1647.8500000000001	1035.76	1569.43	1595.1599999999999	1986.72	True	False	1417.8664581659036	1809.816595454015	1767.8319204267261	1761.3199255032907	2041.9478460761532	1966.2736908465351	1268.055545950241	1514.2322573386082	1521.0013597731931	1626.9057562895862	0.8715111202259008	1.1124286630969857	1.0866222051230208	1.0826195178756126	1.2551113290871474	1.2085971687327057	0.7794277824932162	0.9307436841283618	0.9349044060438235	1.0	10.667914965376477	-8.756966627496565	24.999989657423725	0.9054976082351913	1.1085205310038293	0.43237257908956817	0.10731721957314531	108.1364154896448	604421.5123506447	0.04350928578061505	0.03253036351060828	1.7499811573107895e-09	8.756966627496565	0.20302292276863798	
TQSS(ph)ASLAASYAAQQHPQAAASYR	ddPTM_K562_Methotrexat_30min_R1	1	TQSSASLAASYAAQQHPQAAASYR	24	0	Q96PK6	Q96PK6	RBM14	RNA-binding protein 14	1	T(0.274)QS(0.274)S(0.418)AS(0.034)LAASYAAQQHPQAAASYR	114.71	3.7677999999999995e-08	7040500.0	890.47	519.23	651.42	916.89	544.27	450.48	533.2	621.41	775.66	1021.2	True	False	851.3260050186717	605.0239320990412	514.6958441810184	836.5076772635612	615.8510449259772	537.5288844570489	652.7836729557706	599.5546580814591	739.5997359021515	836.250784369677	1.0180271527761346	0.7234958022252586	0.6154802528155112	1.0003071959975234	0.7364430102031823	0.6427843112424828	0.7806075463926835	0.7169555703715994	0.8844233688338168	1.0	9.707791848719511	-10.001574878344156	4.655626546649803	0.9996987564692171	0.7739289819699974	0.23305244867220531	0.12670049004551068	0.22447445021583734	15.485568303883328	0.12030270952987893	0.031433056284521144	9.963802756557046e-11	10.001574878344156	-0.22576977449921976	
TQTPPVS(ph)PAPQPT(ph)EERLPSSPVYEDAASFK	ddPTM_K562_Methotrexat_30min_R1	1	TQTPPVSPAPQPTEERLPSSPVYEDAASFK	30	1	Q14247-3;Q14247;H0YEV2;H0YCD9;Q14247-2	Q14247-3	CTTN	Src substrate cortactin	2	T(0.097)QT(0.322)PPVS(0.729)PAPQPT(0.696)EERLPS(0.06)S(0.059)PVY(0.035)EDAAS(0.002)FK	52.248999999999995	0.011112	22913000.0	1283.8	1291.5	1983.2	1458.8	805.72	1068.5	1039.9	1193.4	1282.2	1395.9	True	False	1227.3656891787157	1504.898423253493	1566.9534220315547	1330.9092689331133	911.6863026030438	1274.9725027578504	1273.1240463366569	1151.4274455744412	1222.590801863882	1143.0889834524407	1.0737271611801702	1.3165190506064446	1.3708061618255891	1.1643094179014866	0.7975637205858658	1.1153746744256825	1.1137576030970702	1.0072946745552704	1.0695499821644017	1.0	10.158721998790796	-7.529427989505712	24.93913673222375	1.0231328024013253	1.2612326704689647	0.4890946645696501	0.10989295036318944	131.3759386229714	500268.80692627723	0.032508446815236305	0.042074565212449275	2.955098833655856e-08	7.529427989505712	0.2380998680676394	
TQTPPVSPAPQPTEERLPS(ph)SPVYEDAASFK	ddPTM_K562_Methotrexat_30min_R1	2	TQTPPVSPAPQPTEERLPSSPVYEDAASFK	30	1	Q14247-3;Q14247;H0YEV2;H0YCD9;Q14247-2	Q14247-3	CTTN	Src substrate cortactin	1	TQTPPVSPAPQPT(0.003)EERLPS(0.462)S(0.462)PVY(0.071)EDAAS(0.001)FK;TQTPPVS(0.001)PAPQPT(0.056)EERLPS(0.436)S(0.436)PVY(0.07)EDAAS(0.001)FK	65.15100000000001	0.00016495	188237000.0	3223.7	2453.5	4737.2	3811.1000000000004	2627.5	2699.3	2495.5	3277.2	3190.7	3979.8999999999996	True	False	3081.990007949391	2858.8991726306203	3742.926457668355	3476.9867801144705	2973.0623046337405	3220.9015224092327	3055.179399589508	3161.939018465357	3042.36505342933	3259.1015439804937	0.9456563308503766	0.8772046940086784	1.1484534639865633	1.066854387073765	0.9122337136518306	0.9882789716565242	0.9374299506661196	0.9701873279479143	0.9334980860134683	1.0	11.670258587556257	-7.770000775752533	24.999931247013016	0.9560390285424745	1.0100117741473482	0.11691035439496422	0.07079688766481394	452.5478912126752	1321471.435497288	0.02334743718482463	0.026882378866783314	1.6982406190001345e-08	7.770000775752533	0.05397274560487375	
TQTPQLHFLDT(ph)DDEVSPTSWGDSR	ddPTM_K562_Methotrexat_30min_R1	2	TQTPQLHFLDTDDEVSPTSWGDSR	24	0	Q86US8	Q86US8	SMG6	Telomerase-binding protein EST1A	1	TQTPQLHFLDT(0.999)DDEVSPTSWGDSR;TQTPQLHFLDT(1)DDEVSPTSWGDSR	120.64	3.9118000000000005e-09	44189000.0	2909.7	2099.5299999999997	2187.34	2476.04	1462.2	1750.96	2063.41	1839.88	2613.38	2528.4700000000003	True	False	2781.7930719764067	2446.441646591876	1728.2472257697164	2258.9694175000996	1654.5049293379457	2089.308239053706	2526.1822179551136	1775.1703775460883	2491.8845342185537	2070.5395816247533	1.3435111777933424	1.1815478768448138	0.8346844663619326	1.091005184130547	0.7990694522437746	1.0090646214134313	1.2200598531774105	0.8573467483065991	1.2034952416911397	1.0	11.015791067021132	-6.544269646956328	6.254716890721323	1.0004557732160364	1.307006651076315	0.39058734365155867	0.13702018709477812	0.13131575772063725	18.490184584632136	0.03345905601599997	0.09677892501642706	2.855816858777331e-07	6.544269646956328	0.30655087786027857	
TQTPQLHFLDTDDEVS(ph)PTSWGDSR	ddPTM_K562_Methotrexat_30min_R1	2	TQTPQLHFLDTDDEVSPTSWGDSR	24	0	Q86US8	Q86US8	SMG6	Telomerase-binding protein EST1A	1	TQTPQLHFLDTDDEVS(0.588)PT(0.166)S(0.24)WGDS(0.006)R;TQTPQLHFLDTDDEVS(0.386)PT(0.386)S(0.146)WGDS(0.082)R	113.43	4.6284e-08	18000900.0	2690.7	2285.7	4201.0	2734.9	2860.8	2567.6000000000004	2362.61	3988.5	3281.0	4368.5	True	False	2572.420049753209	2663.3730747429418	3319.2675100618017	2495.135563206178	3237.0453438995996	3063.752361329954	2892.4854342873846	3848.2221942966794	3128.467026138978	3577.3223183695013	0.7190909347317872	0.744515824326636	0.9278636965468301	0.697486930488117	0.9048794198044208	0.8564373262083843	0.8085615935233209	1.0757269968479248	0.8745275789308506	1.0	11.80466439633153	-7.898720779883261	0.2743471395095137	1.0217018221483165	0.6628933264827064	0.4477706535791598	0.08641374367967435	3.2695343330509403	0.43703202697233484	0.12917326963445516	0.3905013296012391	1.2626390597910567e-08	7.898720779883261	-0.3588084956656101	
TQVLS(ph)PDSLFTAK	ddPTM_K562_Methotrexat_30min_R1	1	TQVLSPDSLFTAK	13	0	A8MQ02;J3KN01;P55196;P55196-5;P55196-1;H0Y8L4;H0Y948	A8MQ02	MLLT4	Afadin	1	TQVLS(0.997)PDS(0.002)LFTAK	174.18	0.0009343	10461000.0	2409.0	1988.7	3189.1	2846.7	1995.9	1696.0	1122.3	1923.9	2400.8	2993.8	True	False	2303.103244455153	2317.2988728797695	2519.751491630108	2597.1342307868745	2258.395833993713	2023.7279968903263	1374.0043438827097	1856.2353465230995	2289.1873320190366	2451.5938094848602	0.939431008328044	0.9452213755453603	1.027801376346096	1.0593656342004698	0.9211949488762403	0.8254744277215975	0.5604535052123588	0.7571545250855156	0.9337547366788509	1.0	11.259504251624955	-8.185697142191465	3.2161647298367573	0.7824331434737273	0.9909564889692888	0.32919068975345445	0.11527059672266089	0.26530185502073084	5.363489979676768	0.04159578776383901	0.0407562405905106	6.5208296943188835e-09	8.185697142191465	0.2085233454955615	
TRDDGDEEGLLT(ph)HS(ph)EEELEHS(ph)QDTDADDGALQ	ddPTM_K562_Methotrexat_30min_R1	1	TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ	32	1	Q9UKM9-2;Q9UKM9	Q9UKM9-2	RALY	RNA-binding protein Raly	3	T(0.045)RDDGDEEGLLT(0.9)HS(0.747)EEELEHS(0.748)QDT(0.56)DADDGALQ	47.286	0.010043	12326000.0	412.66	296.92	622.44	405.98	419.9	229.01	368.81	420.87	236.1	517.36	True	False	394.51996050513225	345.9809832229404	491.7983501458863	370.3883637246132	475.12420997743396	273.26294137255536	451.52503080048336	406.0677635486132	225.12376253319485	423.66109067909946	0.9312159393083372	0.816645641610271	1.1608296370987656	0.8742562672699214	1.1214723759877092	0.6450036299876718	1.0657694103480684	0.9584731108955855	0.5313770074385095	1.0	8.726766826472907	-8.24274335003566	24.967428054648305	0.8516319620047311	0.975832817637931	0.13304440707878318	0.17822042962303827	1960.1983598949375	2617729.9070911272	0.05733948723203177	0.057245666634000936	5.718164565712653e-09	8.24274335003566	0.12420085563319982	
TRDDGDEEGLLT(ph)HSEEELEHSQDT(ph)DADDGALQ	ddPTM_K562_Methotrexat_30min_R1	2	TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ	32	1	Q9UKM9-2;Q9UKM9	Q9UKM9-2	RALY	RNA-binding protein Raly	2	TRDDGDEEGLLT(0.465)HS(0.465)EEELEHS(0.225)QDT(0.845)DADDGALQ;TRDDGDEEGLLT(0.5)HS(0.5)EEELEHS(0.462)QDT(0.538)DADDGALQ	85.84899999999999	3.9305e-06	312430000.0	2003.55	1568.42	2629.6000000000004	2052.8	1630.79	1846.04	1344.51	1708.51	2128.3999999999996	2045.06	True	False	1915.4763409830312	1827.5747464183078	2077.6828956102136	1872.8342111776085	1845.2674693715146	2202.7611034076767	1646.0505928840275	1648.4207349073135	2029.4511485626936	1674.6798169634276	1.1437866042096465	1.0912980068823623	1.2406448531621534	1.118323748938158	1.1018628460677342	1.3153326869381992	0.9829046580788731	0.984319938778669	1.2118442749507463	1.0	10.70966957686878	-8.79669861432709	24.999736536496503	1.0434605600160296	1.1629946809840277	0.31955335792410655	0.08825249288105588	230.04463953552388	163105.64909924645	0.03618806260014184	0.02439904116074604	1.5969870177245215e-09	8.79669861432709	0.11953412096799809	
TRDDGDEEGLLTHS(ph)EEELEHSQDTDADDGALQ	ddPTM_K562_Methotrexat_30min_R1	1	TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ	32	1	Q9UKM9-2;Q9UKM9	Q9UKM9-2	RALY	RNA-binding protein Raly	1	TRDDGDEEGLLT(0.005)HS(0.752)EEELEHS(0.121)QDT(0.121)DADDGALQ	65.765	8.5515e-05	450750000.0	1474.1	1469.9	2310.1	1906.4	1627.0	1573.8	1377.5	1579.4	1578.3	2203.8	True	False	1409.3003290375011	1712.7759909719778	1825.2415793843754	1739.2688718769455	1840.9790179406637	1877.9145763596666	1686.4394401661173	1523.8516067875587	1504.925177493186	1804.6704647413787	0.7809183762751186	0.949079637770561	1.0113988204743765	0.963759814247414	1.0201192150637253	1.0405858648707835	0.9344860865819041	0.844393276534249	0.8339058054617478	1.0	10.817519707765207	-15.957316019372168	18.464239823615728	0.9994114467832449	0.941660094446604	0.0	0.08468400699033252	0.0	0.0	0.0	0.020598390381764912	1.1032755166315182e-16	15.957316019372168	-0.05775135233664086	
TRDDGDEEGLLTHSEEELEHS(ph)QDTDADDGALQ	ddPTM_K562_Methotrexat_30min_R1	2	TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ	32	1	Q9UKM9-2;Q9UKM9	Q9UKM9-2	RALY	RNA-binding protein Raly	1	TRDDGDEEGLLTHS(0.019)EEELEHS(0.798)QDT(0.182)DADDGALQ;TRDDGDEEGLLT(0.276)HS(0.276)EEELEHS(0.33)QDT(0.117)DADDGALQ	78.97800000000001	7.840499999999999e-06	532196000.0	1952.0700000000002	1757.26	2758.8999999999996	2284.2	1919.2800000000002	1567.89	1917.87	2073.24	1932.46	2483.0	True	False	1866.2593401426216	2047.6173466871344	2179.8445925992637	2083.9477324492864	2171.698961003785	1870.8625525025802	2348.0011681389424	2000.3229740763804	1842.6203563951608	2033.3046392380616	0.9178454148621641	1.007039135785593	1.0720698465607765	1.0249067907651075	1.06806374170158	0.920109321741206	1.154770968810068	0.9837792800325089	0.9062195210874275	1.0	10.989610667376596	-9.518832707218841	24.98310788498645	0.9504062837522057	1.0258983827778094	0.14531080705164678	0.06939257556825851	305.0468224385376	1883642.3304450302	0.04306688098043013	0.017109695659074324	3.0280796375047456e-10	9.518832707218841	0.07549209902560372	
TRDDGDEEGLLTHSEEELEHSQDT(ph)DADDGALQ	ddPTM_K562_Methotrexat_30min_R1	3	TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ	32	1	Q9UKM9-2;Q9UKM9	Q9UKM9-2	RALY	RNA-binding protein Raly	1	TRDDGDEEGLLTHSEEELEHS(0.158)QDT(0.842)DADDGALQ;TRDDGDEEGLLTHS(0.002)EEELEHS(0.172)QDT(0.826)DADDGALQ;TRDDGDEEGLLT(0.001)HS(0.03)EEELEHS(0.415)QDT(0.555)DADDGALQ	92.463	3.4599000000000004e-07	106425000.0	2608.76	1808.67	2750.6600000000003	2603.48	1940.13	1936.0100000000002	1929.0099999999998	1926.12	2703.97	2871.25	True	False	2494.0820340410237	2107.521975366548	2173.3340559929998	2375.236950563465	2195.2911014611054	2310.1165325823354	2361.6395967149497	1858.3772678647917	2578.263024891499	2351.2388020186418	1.0607523284745661	0.8963453535885626	0.9243357391546521	1.0102065976982941	0.9336742399693096	0.9825103815907592	1.0044235382162707	0.7903821875809863	1.0965551532570603	1.0	11.199205357465042														
TRDELEVIHLIEEHR	ddPTM_K562_Methotrexat_30min_R1	4	TRDELEVIHLIEEHR	15	1	P10155-3;P10155-5;P10155-4;P10155	P10155-3	TROVE2	60 kDa SS-A/Ro ribonucleoprotein	0	;;;	150.9	5.3646e-10	43668300.0	14280.8	12201.4	16295.599999999999	14682.3	13039.0	12565.400000000001	11874.7	16744.4	16118.2	18483.899999999998	False	True	13653.033131347094	14217.473961660993	12875.376252550115	13395.125554741335	14753.857046667677	14993.485714696759	14537.90375327811	16155.48996118374	15368.868400095476	15136.286597346932	0.9020067797698927	0.9392973547523217	0.8506297875468937	0.8849677540519888	0.9747342554450384	0.9905656594349103	0.9604669982812226	1.0673350994830828	1.0153658429531396	1.0	13.885723690243246	-7.913046103444764	2.9504260972692564	1.007312533857806	0.894041490046834	0.7291141377308086	0.03237784171115975	0.14695157684326723	2.5847924097332786	0.011520677109978405	0.013197515987950983	1.221669964334675e-08	7.913046103444764	-0.11327104381097197	
TRKS(ph)PSSDSWTCADTSTER	ddPTM_K562_Methotrexat_30min_R1	1	TRKSPSSDSWTCADTSTER	19	2	F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;E5RHH7;Q8N6T3-4;H0YIQ0	F8VWH9	ARFGAP1	ADP-ribosylation factor GTPase-activating protein 1	1	T(0.252)RKS(0.736)PS(0.011)SDSWTCADTSTER	90.87200000000001	0.0084146	45298000.0	1412.6	945.63	1807.7	1320.8	1127.5	847.62	887.3	1248.9	1234.0	1778.8	True	False	1350.503795399482	1101.8792845382893	1428.2884736821513	1205.007514674292	1275.7860127400734	1011.4105688232182	1086.2996118035542	1204.9754791167413	1176.631609343339	1456.6420830755792	0.9271349572353457	0.7564516344411542	0.9805349510886288	0.8272502412741078	0.8758404192513488	0.6943439164463164	0.7457560264288963	0.8272282485293404	0.8077698859688159	1.0	10.5084307156639														
TRPGS(ph)FQSLSDALSDTPAK	ddPTM_K562_Methotrexat_30min_R1	1	TRPGSFQSLSDALSDTPAK	19	1	G3V4K3;Q9H9C1-2;Q9H9C1	G3V4K3	VIPAS39	Spermatogenesis-defective protein 39 homolog	1	T(0.237)RPGS(0.58)FQS(0.182)LS(0.001)DALSDTPAK	138.57	2.2650999999999998e-17	0.0	3046.8	1947.9	4042.2	3557.0	1918.2	1762.1	2178.1	2720.9	3105.5	3927.6	True	False	2912.866320135312	2269.7573663611925	3193.7974599314007	3245.1633325987677	2170.4769220736225	2102.600886391772	2666.5943699642976	2625.2044047791996	2961.1259828328516	3216.273580777854	0.9056649712711432	0.7057102915393948	0.99301175093413	1.0089823676672203	0.6748421325367147	0.6537381953320212	0.8290943860936678	0.8162254667851655	0.920669808852736	1.0	11.651174414078312	-9.952416632485358	2.914049513565808	0.9992534501582122	0.8205629850889175	0.19591804590313433	0.11619544697178262	0.41246299968226807	7.729170703521355	0.11938660922062419	0.03215068548810659	1.1157923191765491e-10	9.952416632485358	-0.17869046506929476	
TRPGSFQS(ph)LSDALSDTPAK	ddPTM_K562_Methotrexat_30min_R1	1	TRPGSFQSLSDALSDTPAK	19	1	G3V4K3;Q9H9C1-2;Q9H9C1	G3V4K3	VIPAS39	Spermatogenesis-defective protein 39 homolog	1	T(0.004)RPGS(0.341)FQS(0.648)LS(0.007)DALSDTPAK	93.34	0.0012919000000000001	12592000.0	2542.3	1862.4	3796.0	2917.3	1874.3	2007.9	1453.4	2545.0	2741.2	3593.4	True	False	2430.543536064069	2170.1299446127027	2999.2714754093317	2661.5448384004476	2120.8033025975337	2395.8982576392036	1779.3619472504063	2455.490907480267	2613.7622103176354	2942.6004392420678	0.8259849022146241	0.7374871272606988	1.0192588281478885	0.9044873381062866	0.7207241847431362	0.8142112077765884	0.6046903016532956	0.8344629038772025	0.8882491062873857	1.0	11.522875944011936	-3.961512260183127	19.281114889076626	0.8245552666236896	0.9465640196361336	0.0	0.12084946610045494	0.0	0.0	0.028077104431287282	0.0	0.00010926667806447399	3.961512260183127	0.12200875301244396	
TRRGRLQ	ddPTM_K562_Methotrexat_30min_R1	1	TRRGRLQ	7	3	A0A096LNK7	A0A096LNK7	ARHGEF9		0		76.847	0.016349000000000002	15432000.0	6036.8	5964.3	5496.5	5623.9	5981.1	5401.9	6005.5	6339.5	6694.6	5579.3	False	True	5771.429500260223	6949.799199234081	4342.859764116802	5130.861418668038	6767.719486296811	6445.740723114298	7352.38624894201	6116.536191737195	6383.3695072203545	4568.8347054776195	1.2632169628156609	1.5211316773841481	0.9505399175220994	1.1230131421731233	1.48127912751646	1.4108062862038844	1.6092475921983267	1.3387519107233232	1.397154836783058	1.0	12.157610533314504	-7.764581527295174	24.977402553680932	1.4035262542043685	1.2175269055505153	0.1226990136902052	0.19747605877662455	150.09754678023	1193150.0362095102	0.06028267574323569	0.0712722484568793	1.7195645082101587e-08	7.764581527295174	-0.18599934865385315	
TRS(ph)LHGPCPVTTFGPK	ddPTM_K562_Methotrexat_30min_R1	1	TRSLHGPCPVTTFGPK	16	1	O95544;O95544-2	O95544	NADK	NAD kinase	1	T(0.267)RS(0.733)LHGPCPVTTFGPK	84.324	0.012053	10074000.0	1815.2	1294.2	2800.0	1933.7	1294.5	1187.9	1095.2	1743.2	1605.3	2016.4	True	False	1735.4059814591094	1508.0445523613403	2212.318264263995	1764.1755232629291	1464.7494399042348	1417.4448629162846	1340.8264790344329	1681.8906679448335	1530.669953386436	1651.2104206845072	1.05099020677189	0.9132964118141783	1.3398160746507892	1.0684135111814475	0.8870761845707252	0.8584277601207753	0.8120264154332281	1.0185804588415859	0.9269987242158384	1.0	10.689308265321758	-7.704597502099851	5.7509673035469095	0.9099404609452222	1.1006158188276227	0.3670068254616302	0.11322519744441355	0.21711423158311285	14.71121613313425	0.03486133975317435	0.04468682671210251	1.974251596581624e-08	7.704597502099851	0.19067535788240053	
TRS(ph)MDDLLSACDTSSPLTR	ddPTM_K562_Methotrexat_30min_R1	1	TRSMDDLLSACDTSSPLTR	19	1	J3QR65;Q9NYA4	J3QR65	MTMR4	Myotubularin-related protein 4	1	T(0.129)RS(0.871)MDDLLSACDTSSPLTR	149.24	1.1863e-12	12577000.0	575.76	514.29	857.81	663.14	443.7	330.08	504.92	687.42	720.09	621.55	True	False	550.4502797955579	599.2676810646838	677.7674036672493	605.0035457912701	502.0543271421469	393.8632884513907	618.1611630698189	663.243048966635	686.6131730729703	508.98127205735693	1.0814745257140381	1.177386505091591	1.331615603316092	1.1886558091730581	0.9863905701535726	0.773826681008032	1.2145066960345028	1.3030794753719237	1.3489949645840724	1.0	8.991468763154188	-12.181671826765685	12.48117817681561	1.0000017167633415	1.1527427597496809	0.07358139377253925	0.16587736498950323	0.0	0.0	0.1778023448594673	0.043123402843416536	6.581549822032068e-13	12.181671826765685	0.1527410429863394	
TRS(ph)PDVISSASTALSQDIPEIASEALSR	ddPTM_K562_Methotrexat_30min_R1	2	TRSPDVISSASTALSQDIPEIASEALSR	28	1	Q6P2E9-2;Q6P2E9	Q6P2E9-2	EDC4	Enhancer of mRNA-decapping protein 4	1	T(0.146)RS(0.63)PDVIS(0.11)S(0.11)AS(0.002)T(0.001)ALSQDIPEIASEALSR;T(0.149)RS(0.705)PDVIS(0.057)S(0.057)AS(0.031)T(0.001)ALSQDIPEIASEALSR	171.17	1.1052e-34	1946920000.0	2505.28	2083.3	2292.92	2366.0	1990.92	1978.28	2100.367	2868.0	2695.62	2843.7299999999996	True	False	2395.1508909375725	2427.5299149547054	1811.6674266057846	2158.57645345198	2252.7608767046263	2360.554611844454	2571.4277659697927	2767.1308144021236	2570.3012145689554	2328.7029406928946	1.0285343180031827	1.0424386350593973	0.7779727482401562	0.9269436714026331	0.9673886854947363	1.0136778592902373	1.1042317682669636	1.1882712758454184	1.1037480005088904	1.0	11.185310899598198	-8.552449258092308	2.224006999079369	1.1164273021154119	0.9423172329037126	0.4335862567644415	0.08008289800195072	0.28223035497113125	2.817658292004296	0.03681452432637205	0.027903497823823738	2.8025330436621008e-09	8.552449258092308	-0.17411006921169925	
TRS(ph)WDSSSPVDRPEPEAASPTTR	ddPTM_K562_Methotrexat_30min_R1	2	TRSWDSSSPVDRPEPEAASPTTR	23	2	C9J0I9;Q86WB0;Q86WB0-2	C9J0I9	ZC3HC1	Nuclear-interacting partner of ALK	1	T(0.266)RS(0.723)WDS(0.003)S(0.003)S(0.004)PVDRPEPEAASPTTR;T(0.224)RS(0.77)WDS(0.002)S(0.002)S(0.002)PVDRPEPEAASPTTR	65.248	0.021971	97866000.0	604.01	400.78	634.73	651.38	410.77	422.91999999999996	501.79999999999995	653.3	660.51	417.58000000000004	True	False	577.4584436211528	467.0020829047892	501.5088470986735	594.2745267326922	464.79345494744075	504.6433045075805	614.3414236481727	630.3230687060351	629.8030342685322	341.952215567068	1.6887109289920492	1.3656939819218537	1.466605052600723	1.7378876336484375	1.3592351030001721	1.4757714134728381	1.796570970097079	1.843307456454857	1.8417866754397656	1.0	8.41765092663758	-8.746718805111119	24.846496930572332	1.6906919087888659	1.509596980954322	0.009485706075464728	0.2578554917798169	512.6050810052046	865214.3515735095	0.09365607244041178	0.07222149265730657	1.7917656022595615e-09	8.746718805111119	-0.18109492783454395	
TRS(ph)YDNLTTACDNTVPLASR	ddPTM_K562_Methotrexat_30min_R1	2	TRSYDNLTTACDNTVPLASR	20	1	Q13615-3;Q13615-2;Q13615;G5E953	Q13615-3	MTMR3	Myotubularin-related protein 3	1	T(0.272)RS(0.516)Y(0.212)DNLTTACDNTVPLASR;T(0.229)RS(0.77)YDNLT(0.001)TACDNTVPLASR	238.72	1.4899e-57	62819000.0	2892.4100000000003	2010.34	2841.48	2808.3	2266.05	2271.1800000000003	1824.22	2558.24	2324.14	3195.8199999999997	True	False	2765.2631196739444	2342.5145150626618	2245.092179121734	2562.10069916703	2564.075294163764	2710.053391496093	2233.3477717167584	2468.2652491757644	2216.09123868657	2617.0260298710355	1.0566433379381457	0.8951055466491095	0.8578791932124458	0.9790123101271897	0.9797668287961656	1.0355469760572622	0.8533915009728871	0.9431565528973352	0.8467975531736598	1.0	11.353712558677037	-8.776967084124689	24.999714897958068	0.906099479367889	0.9601648592261496	0.1340382239262432	0.06849123907863743	548.8221959455882	883599.2062444249	0.028886348352041222	0.019554879234433102	1.6712172737482868e-09	8.776967084124689	0.05406537985826054	
TRT(ph)FSATVR	ddPTM_K562_Methotrexat_30min_R1	1	TRTFSATVR	9	1	Q9Y2V2;H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9	Q9Y2V2	CARHSP1	Calcium-regulated heat stable protein 1	1	T(0.004)RT(0.951)FS(0.044)ATVR	111.5	0.021129	205960000.0	3819.7	3355.1	3922.2	4190.0	3475.7	3191.1	2879.4	4518.3	4613.0	5247.2	True	False	3651.7905615796385	3909.4732480509438	3098.9838200343693	3822.66920539467	3932.8154718232145	3807.7349120735385	3525.17874701584	4359.388828003179	4398.542636872627	4296.881233592412	0.8498700250382659	0.9098397268901064	0.721217006373588	0.889638088088072	0.9152720910871395	0.8861624757755004	0.820404045486873	1.0145472008679437	1.0236593468037793	1.0	12.069074186029184	-9.269912319371091	24.707276319598513	1.0143274785874126	0.8576669137113939	0.6460019128019221	0.05313644060750846	354.6364787527492	1034119.8864548821	0.029166997397869154	0.014373504794191144	5.37140229797818e-10	9.269912319371091	-0.15666056487601865	
TRTFS(ph)ATVR	ddPTM_K562_Methotrexat_30min_R1	1	TRTFSATVR	9	1	Q9Y2V2;H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9	Q9Y2V2	CARHSP1	Calcium-regulated heat stable protein 1	1	TRT(0.048)FS(0.952)ATVR	130.01	0.0031818000000000003	429480000.0	3849.5	3390.3	4524.2	4353.3	4804.5	4162.6	3827.2	5594.9	5576.1	6407.3	True	False	3680.2805892611523	3950.489449753247	3574.6322468511303	3971.6529479342776	5436.375962935414	4966.963537650755	4685.547023886582	5398.124195780489	5316.868328087032	5246.875881993571	0.7014232225106143	0.7529222224048957	0.6812877466986954	0.7569557651562424	1.0361167455079652	0.946651616954876	0.8930165548544079	1.0288263563287208	1.0133398326294822	1.0	12.357242947227089	-7.6882390992613985	5.588127652822386	0.980859565090905	0.7176844445116942	0.8969642603362575	0.043773545923768815	0.0635601681672543	3.5007139298655994	0.013626324354429772	0.017542570870706646	2.050033229680323e-08	7.6882390992613985	-0.2631751205792108	
TS(ph)AALS(ph)T(ph)VGSAISRKLGDMS(ph)LR	ddPTM_K562_Methotrexat_30min_R1	1	TSAALSTVGSAISRKLGDMSLR	22	2	A0A087WYR3	A0A087WYR3	TPD52L2		4	T(0.72)S(0.737)AALS(0.739)T(0.739)VGS(0.032)AIS(0.039)RKLGDMS(0.993)LR	42.038999999999994	0.028475999999999998	15138000.0	562.75	610.44	633.69	690.0	421.91	461.4	483.78	558.64	464.48	623.61	True	False	538.012183817824	711.3048342941248	500.68712888623236	629.5087712941106	477.39856020857144	550.5590199087248	592.2799799372516	538.9923145598337	442.88642618135697	510.668186095549	1.053545528127258	1.3928904397444402	0.9804549069609574	1.232715858231133	0.9348507958928293	1.0781149773949537	1.1598137421986037	1.0554648384910061	0.867268489089881	1.0	8.996242373767611	-7.733967426596897	0.3681590484911612	0.97164177118484	1.238568828208268	0.1992113764432989	0.13008836130078613	3.5534314529551234	0.81278259684053	0.13388718705070168	0.3829711836117672	1.8451538061204153e-08	7.733967426596897	0.2669270570234281	
TS(ph)PDPSPVSAAPSK	ddPTM_K562_Methotrexat_30min_R1	1	TSPDPSPVSAAPSK	14	0	Q13469-3;Q13469-4;Q13469-2;Q13469;Q13469-5	Q13469-3	NFATC2	Nuclear factor of activated T-cells, cytoplasmic 2	1	T(0.155)S(0.803)PDPS(0.018)PVS(0.024)AAPSK	91.307	0.013682	45203000.0	951.08	924.29	1784.9	1403.4	930.24	744.13	733.78	1175.4	1029.3	1195.2	True	False	909.2716619910374	1077.0132122562684	1410.2738821017163	1280.3661009190641	1052.5828651807767	887.9225909941027	898.3488438512475	1134.0605157769373	981.4480676637753	978.7376982752037	0.9290248690669789	1.100410471727259	1.440910965815452	1.3081810409218015	1.0754493947006516	0.9072120064025925	0.9178647613496212	1.158697082758183	1.0027692500180059	1.0	9.93477845910163	-7.9668735998113815	7.473642172299645	1.0009630467602972	1.204568096229668	0.30747889492586167	0.13927279265237394	0.26738403404422045	47.68917392198061	0.047417402799319476	0.053442525959117	1.079260792343958e-08	7.9668735998113815	0.20360504946937086	
TS(ph)PSGGTWSSVVSGAK	ddPTM_K562_Methotrexat_30min_R1	1	TSPSGGTWSSVVSGAK	16	0	F8WB06;F8VRK6	F8WB06	ATXN2		1	T(0.113)S(0.877)PS(0.008)GGT(0.001)WS(0.001)S(0.001)VVSGAK	87.932	0.011695	6204400.0	1580.8	1115.3	2330.8	1512.4	1301.8	1158.5	1029.1	1516.3	1612.6	2210.7	True	False	1511.3099247964756	1299.5843681414026	1841.5969322666149	1379.8102401524816	1473.009517858117	1382.3637290079262	1259.9018714155734	1462.9708695529775	1537.6305779797974	1810.320807879011	0.834829892148862	0.7178751757618076	1.0172765646019655	0.7621910073326066	0.8136731961800234	0.7636015246532556	0.6959550295904108	0.8081279644943197	0.8493691125283479	1.0	10.822029665354389	-10.170259911394995	2.6405291608156376	0.9998354456910291	0.8006791246029057	0.33997364885028003	0.08305983176394106	0.8198713511110729	10.052917836760484	0.080147904330785	0.021600653134723143	6.756784823459791e-11	10.170259911394995	-0.19915632108812342	
TS(ph)PTVATQTGASATSTR	ddPTM_K562_Methotrexat_30min_R1	1	TSPTVATQTGASATSTR	17	0	Q6P1L5-2;Q6P1L5	Q6P1L5-2	FAM117B	Protein FAM117B	1	T(0.031)S(0.92)PT(0.049)VATQTGASATSTR	116.87	0.00053652	12884000.0	1906.8	1682.8	2186.3	1744.2	1413.6	1646.1	1420.9	1422.9	1743.9	1894.0	True	False	1822.979355137852	1960.8540972907297	1727.425507557275	1591.288694045199	1599.5131774805916	1964.185528113895	1739.5729949415872	1372.8558004926022	1662.8264696384524	1550.978246764756	1.1753739028516186	1.2642692451560484	1.1137651422001418	1.0259903369789538	1.0312931086023136	1.2664171997325324	1.1215972877570837	0.8851547746438699	1.0721146303031681	1.0	10.59896273666814	-3.0000000000003917	0.1699366854528547	0.9700471840577964	1.9932243128203204	0.2941939169381721	0.09503288898683412	79.72289911275813	0.8615278569722442	0.2659296357616229	20.743457710439365	0.0009999999999990982	3.0000000000003917	1.023177128762524	
TS(ph)PYILR	ddPTM_K562_Methotrexat_30min_R1	1	TSPYILR	7	0	P49454	P49454	CENPF	Centromere protein F	1	T(0.201)S(0.799)PYILR	93.162	0.013838999999999999	7796700.0	2562.2	2135.3	3570.2	2467.3	2133.2	2525.0	2119.1	2508.8	2557.5	2884.4	True	False	2449.568755891654	2488.122031105834	2820.8638096697537	2250.9956397303763	2413.7531905783794	3012.920514238251	2594.3621180805944	2420.564081998623	2438.60238322171	2362.0072095925366	1.0370708209287058	1.0533930722146496	1.1942655374690296	0.9530011723032333	1.021907630415222	1.2755763411738281	1.098371803246164	1.0247911488873853	1.032428001624257	1.0	11.205797652965119	-9.267845141366054	18.187240777727173	1.021456699655092	1.092265535076996	0.12680223695021076	0.08575449825460404	29.473489115756898	83653.9119925954	0.047029970068631397	0.02376259990860089	5.397030329159142e-10	9.267845141366054	0.07080883542190408	
TS(ph)SGTSLSAMHSSGSSGK	ddPTM_K562_Methotrexat_30min_R1	1	TSSGTSLSAMHSSGSSGK	18	0	A6NNK5;Q12888;Q12888-3;Q12888-2;M0R142	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	T(0.247)S(0.32)S(0.32)GT(0.092)S(0.01)LS(0.01)AMHS(0.001)SGSSGK	66.939	0.027369	6027200.0	1477.4	941.52	2146.3	1432.3	1162.0	1077.4	877.69	1290.8	1193.8	1749.0	True	False	1412.4552649888108	1097.0901768963447	1695.820960924932	1306.732482789209	1314.8233674536275	1285.5923017981365	1074.5343246747007	1245.401832367596	1138.3004985689458	1432.2391518434845	0.986186743443503	0.7659964995959243	1.1840347743197652	0.912370312672481	0.9180194283624162	0.8976100814891188	0.7502478362580931	0.8695487976045035	0.7947698518810912	1.0	10.484056695121408	-8.176612726820792	2.0016179728943904	0.843630572626303	0.9616812621367994	0.14606659734444982	0.11330880326548354	0.5945063142410631	4.688988794139698	0.04331175230480182	0.04213862417119593	6.658666644520587e-09	8.176612726820792	0.11805068951049635	
TSADAQEPASPVVS(ph)PQQSPPT(ph)SPHTWRK	ddPTM_K562_Methotrexat_30min_R1	1	TSADAQEPASPVVSPQQSPPTSPHTWRK	28	1	Q96D71-3;Q96D71;E9PMG1;H0YDT0;Q96D71-4;F2Z3L2;Q96D71-2	Q96D71-3	REPS1	RalBP1-associated Eps domain-containing protein 1	2	T(0.002)S(0.002)ADAQEPAS(0.185)PVVS(0.68)PQQS(0.135)PPT(0.427)S(0.427)PHT(0.141)WRK	49.18600000000001	0.03249	15495000.0	628.94	584.44	940.89	820.69	537.05	400.33	502.41	640.57	664.84	723.71	True	False	601.2925506714919	681.0087762185609	743.4100470226249	748.7413819034258	607.6814883743289	477.6881067188117	615.0882316761231	618.0407900214677	633.931733513635	592.639106106717	1.0146015416053504	1.1491121142720053	1.2544059940734968	1.2634019155809797	1.0253820278017616	0.8060354131149658	1.0378799261440632	1.0428619773028893	1.0696758397841575	1.0	9.211010017431956	-7.895850333992145	6.718705581040833	0.9883136081944249	1.1738881708351228	0.4586494321850907	0.09275886691002563	0.20627749443794344	11.739157414668442	0.03097718163122688	0.03523527700440796	1.2710120442852505e-08	7.895850333992145	0.18557456264069783	
TSADAQEPASPVVSPQQS(ph)PPT(ph)SPHTWRK	ddPTM_K562_Methotrexat_30min_R1	1	TSADAQEPASPVVSPQQSPPTSPHTWRK	28	1	Q96D71-3;Q96D71;E9PMG1;H0YDT0;Q96D71-4;F2Z3L2;Q96D71-2	Q96D71-3	REPS1	RalBP1-associated Eps domain-containing protein 1	2	TSADAQEPAS(0.009)PVVS(0.124)PQQS(0.868)PPT(0.494)S(0.494)PHT(0.01)WRK	57.477	0.0060971	17580000.0	1579.4	1048.6	1816.0	1628.6	984.79	1157.9	1008.9	1219.5	1494.5	1763.4	True	False	1509.9714671201627	1221.8633268475514	1434.8464171083613	1485.8231665646208	1114.3071463293097	1381.6477874995924	1235.1715072113216	1176.6094937808207	1425.0210212022855	1444.0311723046314	1.045664038339486	0.8461474726321132	0.9936395035145872	1.028941199512536	0.7716641909820466	0.9567991425659621	0.8553634650698185	0.8148089295766285	0.9868353596051488	1.0	10.495886170684882	-6.241894296012743	23.975450619702475	0.9119941967572154	1.0456642548290964	0.16815254397996238	0.08507442774037573	4598.360593320037	5640542.980498571	0.02079277318726133	0.7244184437020531	5.729354621685882e-07	6.241894296012743	0.13367005807188104	
TSAVS(ph)SPLLDQQR	ddPTM_K562_Methotrexat_30min_R1	1	TSAVSSPLLDQQR	13	0	Q5T200-2;Q5T200;A0A087WX14	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	1	TSAVS(0.681)S(0.319)PLLDQQR	265.77	5.239599999999999e-104	95802000.0	2705.0	2209.6	3208.0	3346.3	2675.2	2337.9	1977.9	2787.5	2592.4	2743.4	True	False	2586.0914388755464	2574.698843221772	2534.68463991389	3052.9350744659164	3027.0356907159576	2789.666087222816	2421.49442374197	2689.4620450299603	2471.87988983928	2246.543675910472	1.1511422932062354	1.1460711273188608	1.1282596760050263	1.3589475723095537	1.3474190255790022	1.2417591151848981	1.077875515934759	1.197155467694161	1.1003035090504014	1.0	11.13349139477936	-9.89569781688976	0.8939195717075977	1.0036919386276721	1.2222883523368506	0.3923434797292298	0.08458492649345095	0.6728608331253214	1.210394858637732	0.09049394568190104	0.032326745342324374	1.271458481264801e-10	9.89569781688976	0.21859641370917848	
TSAVSS(ph)PLLDQQR	ddPTM_K562_Methotrexat_30min_R1	2	TSAVSSPLLDQQR	13	0	Q5T200-2;Q5T200;A0A087WX14	Q5T200-2	ZC3H13	Zinc finger CCCH domain-containing protein 13	1	T(0.002)SAVS(0.017)S(0.981)PLLDQQR;TSAVS(0.161)S(0.838)PLLDQQR	231.52	8.2205e-37	377430000.0	8677.4	6960.700000000001	10494.1	9771.7	7021.700000000001	7024.099999999999	7462.0	8131.1	8743.0	9225.2	True	False	8295.951886025381	8110.8373633299225	8291.531820361704	8915.03023254299	7945.176625859844	8381.407914479569	9135.543450104951	7845.124604248643	8336.539838321567	7554.426885984286	1.0981576777739215	1.073653565749368	1.0975725816798847	1.1801067595323516	1.0517246040994208	1.1094697243055696	1.209296692917117	1.0384804463199833	1.1035304152308805	1.0	12.883106594637091	-10.316422887130386	1.2409250805557042	1.0008650313163856	1.1113797551928253	0.2990168631187684	0.04963057469148772	1.4024489839637462	3.6489474696719992	0.0470562071742232	0.014309302404197727	4.825886603857796e-11	10.316422887130386	0.11051472387643968	
TSDHNS(ph)PPSLPNMR	ddPTM_K562_Methotrexat_30min_R1	1	TSDHNSPPSLPNMR	14	0	H7C5G6;Q0VF49	H7C5G6	KIAA2012	Uncharacterized protein KIAA2012	1	TSDHNS(0.999)PPSLPNMR	82.20200000000001	0.032131	42244000.0	58.931999999999995	155.74	155.02	62.674	0.0	57.263000000000005	0.0	173.75	0.0	110.78	True	False	56.34141984318436	181.473387872628	122.48342047364443	57.17946772766245	0.0	68.32826431953465	0.0	167.63911401756255	0.0	90.716668519852	0.6210702042134062	2.000441493648052	1.3501754690962966	0.6303082846913581	0.0	0.7532051764509189	0.0	1.8479416931065673	0.0	1.0	6.503295754588351	-7.259476567386695	6.127130118673678	0.5939922840884685	1.39590805595425	0.22072485343156711	0.6154597894477448	0.20422376305392173	36.7971530152779	0.164164513007461	0.2667125105218961	5.5020360626789414e-08	7.259476567386695	0.8019157718657816	
TSDIFGS(ph)PVTATSR	ddPTM_K562_Methotrexat_30min_R1	5	TSDIFGSPVTATSR	14	0	H3BU16;A6NGP5;Q9H910-2;Q9H910;Q9H910-3;H3BMT0;H3BTV5;H3BMV3	H3BU16	HN1L	Hematological and neurological expressed 1-like protein	1	TSDIFGS(0.999)PVTATSR;T(0.008)SDIFGS(0.99)PVT(0.002)ATSR;TSDIFGS(0.999)PVT(0.001)ATSR;TSDIFGS(1)PVTATSR;TSDIFGS(1)PVTATSR	255.39	5.591999999999999e-77	760463000.0	9957.4	8920.8	12004.8	11547.6	8642.699999999999	8120.900000000001	8035.7	9749.0	9317.5	10937.3	True	False	9519.684618654113	10394.810572326565	9485.156535298709	10535.239836805604	9779.366538632932	9690.148991713833	9837.910279014792	9406.122144214198	8884.331458716822	8956.448985396075	1.0628860426912967	1.1605950739267101	1.0590309341084527	1.1762741968366954	1.0918798906328462	1.0819186272946	1.0984163807616145	1.0502066342979608	0.991947977731259	1.0	13.128711136743654	-9.464792407377109	1.562171438667367	0.9912560353410286	1.1091394064452664	0.5923693069021905	0.03608827390932195	0.2620189362453529	1.1297914375539915	0.02983050909772288	0.010084662684041833	3.429316686030163e-10	9.464792407377109	0.11788337110423786	
TSDISS(ph)PIGSHREEQEGR	ddPTM_K562_Methotrexat_30min_R1	1	TSDISSPIGSHREEQEGR	18	1	Q13129	Q13129	RLF	Zinc finger protein Rlf	1	T(0.18)S(0.18)DIS(0.108)S(0.532)PIGS(0.001)HREEQEGR	80.236	0.0062096	10359000.0	882.66	691.24	953.39	798.88	1081.2	614.63	577.26	800.73	736.19	846.0	True	False	843.8593232672417	805.4556609289544	753.2864678452316	728.8434307412159	1223.396751196955	733.3985487787155	706.7252495319732	772.5678720419157	701.964687587093	692.7812020923885	1.2180747986789422	1.1626407565566996	1.0873367602499904	1.0520542828528108	1.7659208239224196	1.0586294006876218	1.0201276353883013	1.1151686415690114	1.0132559680703919	1.0	9.436255974319705	-8.476175943406728	24.999819636515678	1.045682985970082	1.2492331569191728	0.24962735865965868	0.18685421136998262	675.2393473324745	361453.3685950996	0.06800873009015143	0.059976308316426696	3.3405967679364103e-09	8.476175943406728	0.20355017094909078	
TSDPQISTS(ph)LYPETPVPFK	ddPTM_K562_Methotrexat_30min_R1	1	TSDPQISTSLYPETPVPFK	19	0	I3L273	I3L273	GFY	Golgi-associated olfactory signaling regulator	1	T(0.001)S(0.001)DPQIS(0.003)T(0.003)S(0.879)LY(0.103)PET(0.011)PVPFK	51.606	0.026494999999999998	3606800.0	2802.4	1993.5	3596.0	3201.2	1734.3	1777.0	1952.6	2348.8	2539.1	3368.1	True	False	2679.2098514990143	2322.891991293719	2841.2487422476165	2920.5557661836324	1962.3908486874586	2120.3801005153955	2390.520254713873	2266.1913726874855	2421.0577952055705	2758.104452443703	0.9713953541988639	0.8422059538882285	1.0301454463518402	1.0588996234700234	0.7114998298736527	0.7687816531519397	0.8667257879214301	0.821648132535235	0.8777977183063149	1.0	11.429461378993693	-7.754031598934946	24.999980446641793	0.8298257440607769	0.9700207374525677	0.35236857844318514	0.08847004449997452	191.1108532085598	644962.71122285	0.026658109218768267	0.03372135709657636	1.7618478510434067e-08	7.754031598934946	0.14019499339179076	
TSDST(ph)PDPQRVPLR	ddPTM_K562_Methotrexat_30min_R1	1	TSDSTPDPQRVPLR	14	1	P52948-6;P52948-2;P52948-5;P52948;H7C3P6	P52948-6	NUP98	Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96	1	TSDS(0.089)T(0.911)PDPQRVPLR	147.73	2.2898000000000003e-07	19421000.0	1387.6	1218.9	2069.6	1823.1	1517.6	1164.6	1285.8	1418.7	1512.7	1649.3	True	False	1326.6027654653267	1420.3025072424953	1635.2192427574155	1663.271653545352	1717.1910003852186	1389.642467675988	1574.1733808824629	1368.8035168731853	1442.374907174772	1350.5957879562372	0.9822352307738073	1.051611829318482	1.2107391843949693	1.2315095814583172	1.271432219541958	1.0289107074581043	1.1655399749650857	1.013481256997329	1.067954542755844	1.0	10.399380248025308	-9.266564009518703	1.5043025291800982	1.0195544539831154	1.143542402531359	0.20626214604957804	0.09040251678666505	0.7230592160347613	2.9330150247618842	0.07884453860755342	0.030261487524360666	5.412974615973113e-10	9.266564009518703	0.12398794854824358	
TSDVNETQPPQS(ph)E	ddPTM_K562_Methotrexat_30min_R1	1	TSDVNETQPPQSE	13	0	P35580;P35580-5;P35580-2;P35580-3;P35580-4	P35580	MYH10	Myosin-10	1	TSDVNETQPPQS(1)E	98.337	0.0069185	7195200.0	1304.0	1173.3	1972.4	1464.3	1202.5	1261.7	1199.8	1515.0	1686.2	1792.1	True	False	1246.6777213655128	1367.1678823099676	1558.4201944408233	1335.9270924724146	1360.6498273347556	1505.5056684413482	1468.8856916960497	1461.7165912898256	1607.8089300443585	1467.5333241959452	0.8495055620277392	0.9316094290799377	1.0619317249880336	0.9103214696704506	0.9271679251851057	1.0258749451336704	1.0009215242187741	0.9960363878555831	1.0955859765060325	1.0	10.519177548546903	-3.9214179595546903	0.3822741408483152	1.0201595626011861	1.314385754076312e-27	0.4282417902626424	0.05362194870599312	36.574136370404496	0.9771687121283	0.043200559908889165	24.71566607230292	0.00011983454753893415	3.9214179595546903	-1.0201595626011861	
TSFSVGS(ph)DDELGPIR	ddPTM_K562_Methotrexat_30min_R1	4	TSFSVGSDDELGPIR	15	0	Q9NRY4	Q9NRY4	ARHGAP35	Rho GTPase-activating protein 35	1	TSFSVGS(1)DDELGPIR;TSFS(0.003)VGS(0.997)DDELGPIR;TSFS(0.003)VGS(0.997)DDELGPIR;TSFSVGS(1)DDELGPIR	304.03	4.2321999999999977e-215	294774000.0	3371.5600000000004	3010.21	4014.6099999999997	3865.94	3047.6000000000004	3046.09	2932.79	3493.0400000000004	3224.8599999999997	3800.66	True	False	3223.350259391957	3507.5960376785893	3171.9982238917396	3527.0190424590623	3448.412818116759	3634.70378186772	3590.542813593314	3370.1878033260805	3074.936962485383	3112.323644851603	1.0356732227138439	1.1270023422791664	1.0191736418989876	1.1332430186987292	1.1079865758245013	1.167842485751839	1.1536534188958079	1.0828526168546242	0.9879875338710147	1.0	11.603776376009474	-12.21617776387901	6.141092769235881	0.9999985369044796	1.0952352550167412	0.18221553060346118	0.05682361660660041	1.162443092519479e-06	1.4841027637025413e-07	0.05618940251950194	0.013627722499076862	6.078861325505888e-13	12.21617776387901	0.09523671811226164	
TSGRGSS(ph)LCVLCANTGPS(ph)MRTR	ddPTM_K562_Methotrexat_30min_R1	1	TSGRGSSLCVLCANTGPSMRTR	22	2	V9GZ50	V9GZ50	AKAP8L		2	T(0.093)S(0.264)GRGS(0.148)S(0.494)LCVLCANT(0.25)GPS(0.487)MRT(0.263)R	50.224	0.031904	0.0	1383.6	1503.8	2162.5	1346.3	1489.4	1189.1	1537.4	1730.9	1630.7	2272.6	True	False	1322.7786006758618	1752.2773897705013	1708.6208023110312	1228.2719692655949	1685.2822060976177	1418.876745932952	1882.2010855255103	1670.0232659165415	1554.8891129304568	1861.0101180557474	0.7107852815210955	0.9415732739815287	0.9181147301316546	0.6600028432670786	0.9055739083558998	0.7624229079502773	1.0113868093806506	0.8973746298925362	0.8355081457347989	1.0	10.86187018381475	-8.753746040376122	24.999990143410454	0.9275152863348062	0.8236674414951453	0.26323339916161215	0.09719691017654448	279.18222520376503	907223.509884581	0.037197738776431254	0.028258213015309987	1.7630066872567393e-09	8.753746040376122	-0.10384784483966092	
TSLAEDSCLGRHS(ph)PVPR	ddPTM_K562_Methotrexat_30min_R1	1	TSLAEDSCLGRHSPVPR	17	1	Q13469-3;Q13469-4;Q13469-2;Q13469;Q13469-5	Q13469-3	NFATC2	Nuclear factor of activated T-cells, cytoplasmic 2	1	TSLAEDS(0.003)CLGRHS(0.997)PVPR	78.505	0.015543000000000001	39013000.0	1796.4	1629.4	2950.5	1920.4	2129.7	1948.1	1478.5	2269.7	2217.3	2447.2	True	False	1717.4324069486254	1898.6306549355334	2331.230370968184	1752.0415136133483	2409.792879230628	2324.5427539752623	1810.0912611873725	2189.8733645217944	2114.218206966763	2003.988366147154	0.8570071742734425	0.9474259866018183	1.1632953615644894	0.8742772878376555	1.202498437585079	1.159958207963254	0.9032443959080632	1.0927575237036036	1.055005229911357	1.0	10.968658417870595	-6.548394197058148	7.375586364033663	1.056838255048385	0.8785334568250573	0.2836913317936963	0.10252354806606874	0.18228115224124952	38.87854134534697	0.025507010901502272	0.07065872984654688	2.8288231857950457e-07	6.548394197058148	-0.17830479822332768	
TSNTLEKDLDLLASVPS(ph)PSSSGSR	ddPTM_K562_Methotrexat_30min_R1	4	TSNTLEKDLDLLASVPSPSSSGSR	24	1	A0A087WV97;Q8WU79-3;Q8WU79-2;Q8WU79	A0A087WV97	SMAP2	Stromal membrane-associated protein 2	1	TSNTLEKDLDLLAS(0.057)VPS(0.707)PS(0.132)S(0.05)S(0.05)GS(0.003)R;TSNTLEKDLDLLAS(0.202)VPS(0.487)PS(0.144)S(0.061)S(0.061)GS(0.044)R;TSNTLEKDLDLLASVPS(0.824)PS(0.164)S(0.011)S(0.001)GSR;TSNTLEKDLDLLAS(0.005)VPS(0.75)PS(0.171)S(0.06)S(0.01)GS(0.005)R	140.03	1.1208000000000001e-16	224935000.0	17404.2	12285.900000000001	23778.2	20056.4	11878.4	12050.199999999999	10734.6	14812.099999999999	16121.8	22185.6	True	False	16639.132207200662	14315.936150406575	18787.480768329326	18298.086551569842	13440.61780375315	14378.730606207446	13142.107306284724	14291.150047421788	15372.301036881237	18167.57285714053	0.9158698488808242	0.7879938758456598	1.0341216691994797	1.0071838817136223	0.7398136178917532	0.7914502789818768	0.7233826669983265	0.7866295712585974	0.8461395012839787	1.0	14.14907807150118	-7.765624672455006	24.999886627885797	0.798185470613523	0.932687384705263	0.2752160923763577	0.09448177048351754	130.49516093183792	779482.0746152063	0.02900763806754764	0.03406642863444998	1.7154391901270057e-08	7.765624672455006	0.13450191409174006	
TSNTLEKDLDLLASVPS(ph)PSSSGSRK	ddPTM_K562_Methotrexat_30min_R1	1	TSNTLEKDLDLLASVPSPSSSGSRK	25	2	A0A087WV97;Q8WU79-3;Q8WU79-2;Q8WU79	A0A087WV97	SMAP2	Stromal membrane-associated protein 2	1	TSNTLEKDLDLLASVPS(0.544)PS(0.227)S(0.082)S(0.082)GS(0.065)RK	52.577	0.012704	8261300.0	1761.3	802.61	2652.0	1852.9	783.38	843.83	816.98	1140.6	1367.7	2184.9	True	False	1683.8753609210723	935.2276604626301	2095.3814417243266	1690.459133812836	886.4082010291077	1006.8882049622431	1000.2085617618251	1100.484451501766	1304.115925525839	1789.1934378861235	0.9411365620201015	0.5227090825727443	1.1711318616280835	0.9448163055024732	0.4954233467770659	0.5627609534225937	0.5590276269644384	0.6150729307402079	0.7288848136323434	1.0	10.805093656843757	-7.750422258384204	24.991914903067354	0.6310185201992652	0.8880873510340329	0.243780570249029	0.1984578565568824	288.0512457332718	653430.2912622669	0.0580446655091432	0.07421116059143289	1.776551254378681e-08	7.750422258384204	0.2570688308347677	
TSPADHGGSVGSESGGSAVDSVAGEHS(ph)VSGR	ddPTM_K562_Methotrexat_30min_R1	1	TSPADHGGSVGSESGGSAVDSVAGEHSVSGR	31	0	Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0	Q5T4S7-3	UBR4	E3 ubiquitin-protein ligase UBR4	1	TSPADHGGSVGSESGGSAVDS(0.039)VAGEHS(0.574)VS(0.387)GR	121.45	7.3058e-21	18172000.0	780.9	967.76	1349.3	1358.8	1168.5	1279.5	1114.7	1393.9	1224.6	1098.0	True	False	746.5725710232589	1127.665890892606	1066.1003692755032	1239.6761136730975	1322.1782313851663	1526.7452665219187	1364.6998504197259	1344.875746929959	1167.6686132916154	899.1415601624618	0.8303170536220837	1.25415834486491	1.1856869001616102	1.3787329699776152	1.4704895090671461	1.6980032223691872	1.517780859971754	1.4957330486280263	1.2986482496489593	1.0	9.812404460204954	-5.836499231162154	0.840014951023065	1.448228541934043	0.043251763405480086	0.4588903605470738	0.18071060248637752	3.6633051283867553	1.2286418411419557	0.06352081990342914	5.622696024340062	1.4571382843212618e-06	5.836499231162154	-1.404976778528563	
TSPADHGGSVGSESGGSAVDSVAGEHSVS(ph)GR	ddPTM_K562_Methotrexat_30min_R1	2	TSPADHGGSVGSESGGSAVDSVAGEHSVSGR	31	0	Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;X6RE05;A0A0A0MSW0	Q5T4S7-3	UBR4	E3 ubiquitin-protein ligase UBR4	1	TSPADHGGSVGSESGGSAVDSVAGEHS(0.108)VS(0.892)GR;TSPADHGGSVGSESGGSAVDS(0.004)VAGEHS(0.494)VS(0.501)GR	194.01	1.9551999999999995e-125	16172000.0	1796.3	1525.35	2215.7	1963.17	2099.58	1767.93	1577.47	1765.61	2011.01	2092.35	True	False	1717.336802828889	1777.3881609831324	1750.654849332047	1791.0619341180575	2375.7115712894038	2109.5574513810834	1931.2578030336451	1703.512495542725	1917.5185840401539	1713.4051397139579	1.0022946488392042	1.0373426107965662	1.021740164514919	1.0453230777731086	1.3865439738823322	1.2312076125400562	1.1271460311809596	0.9942263251452109	1.1191273678333145	1.0	10.742650605931162	-3.0467289174425476	15.87310695864776	1.1038440342596985	0.005459463238141726	0.0	0.1202569709665815	0.0	0.0	0.029980604002020482	0.0	0.0008979891360302667	3.0467289174425476	-1.0983845710215567	
TSPS(ph)SPAPLPHQEATPR	ddPTM_K562_Methotrexat_30min_R1	1	TSPSSPAPLPHQEATPR	17	0	P04920-2;P04920-3;P04920	P04920-2	SLC4A2	Anion exchange protein 2	1	TSPS(0.951)S(0.049)PAPLPHQEATPR	240.5	1.1821999999999997e-64	51381000.0	2228.1	2453.8	3057.2	2275.4	2010.5	1783.6	1974.9	2260.9	2043.7	2817.0	True	False	2130.155391851609	2859.248742531491	2415.5354991099575	2075.9192147864055	2274.915989901478	2128.2554571070677	2417.8215973750025	2181.382865509681	1948.6888330753497	2306.814002711889	0.9234187885748047	1.2394795328839519	1.0471305862849176	0.8999074968098669	0.9861722649624497	0.9225951700505945	1.0481216060473941	0.9456258124604969	0.8447533397943972	1.0	11.171685969574686	-7.011322490431727	24.227836066334472	0.9535030620744198	1.0969131145529218	0.281251569303668	0.08850068432667482	391.9831077928169	838772.9169583725	0.022459840063250313	0.04216246059751392	9.742659165298693e-08	7.011322490431727	0.14341005247850203	
TSPSGGTWSSVVSGVPRLS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	TSPSGGTWSSVVSGVPRLSPK	21	1	H0YH87;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHH4;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A2R8Y5A6;A0A5F9ZHX3;A0A5F9ZHW5;Q99700-2;Q99700-5;Q99700-4;Q99700	H0YH87	ATXN2	Ataxin-2	1	TSPSGGTWS(0.001)S(0.001)VVS(0.001)GVPRLS(0.996)PK	74.63	0.0037731	38674000.0	1068.7	740.94	1516.8	1163.3	869.07	838.55	610.14	1280.5	973.64	1302.4	True	False	1021.721227625248	863.3677411733981	1198.444408298438	1061.3152951397656	983.3679379973527	1000.5879196889048	746.9794265139419	1235.4640892056905	928.3756889149504	1066.5227394859648	0.9579929145417847	0.8095164868116344	1.1236932546567697	0.9951173621026504	0.9220318532273484	0.9381777646589712	0.7003877168844668	1.1584038890733364	0.8704696623368784	1.0	10.05869901057864														
TSPSS(ph)PAPLPHQEATPR	ddPTM_K562_Methotrexat_30min_R1	3	TSPSSPAPLPHQEATPR	17	0	P04920-2;P04920-3;P04920	P04920-2	SLC4A2	Anion exchange protein 2	1	T(0.109)S(0.109)PS(0.136)S(0.645)PAPLPHQEATPR;TSPS(0.037)S(0.963)PAPLPHQEATPR;TSPS(0.227)S(0.773)PAPLPHQEATPR	226.06	4.9206e-40	122382000.0	8099.33	7927.61	11822.46	9863.15	8210.03	8221.939999999999	7802.37	8740.32	8994.720000000001	9495.51	True	False	7743.293151063914	9237.512806170056	9341.087209475183	8998.46295302827	9289.792849823838	9810.713541717252	9552.25008694658	8432.917991539465	8576.557430464118	7775.781125626824	0.9958219021294414	1.187985188488108	1.20130531692688	1.1572423152925206	1.1947086343785127	1.261701349769717	1.2284618011513988	1.0845107205688826	1.102983390594439	1.0	12.924771894884474	-9.828737402148283	1.5996920672891397	1.0097644906886756	1.1780369947786844	0.35943828982887616	0.07014057316836343	0.3830969198134744	2.048230143185988	0.06754604306302411	0.02013828329832143	1.4834147665498363e-10	9.828737402148283	0.16827250409000882	
TSPTVAT(ph)QTGASAT(ph)ST(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TSPTVATQTGASATSTR	17	0	Q6P1L5-2;Q6P1L5	Q6P1L5-2	FAM117B	Protein FAM117B	3	T(0.126)S(0.126)PT(0.179)VAT(0.546)QT(0.024)GAS(0.032)AT(0.572)S(0.571)T(0.824)R	43.042	0.032552	12583000.0	505.98	468.82	726.7	407.54	295.49	357.29	339.46	336.69	353.56	560.83	True	False	483.73772504334545	546.2845364225342	574.1756009430874	371.81160094666933	334.3521143277732	426.33123585433077	415.59254617698014	324.8484218622913	337.1230727710138	459.25825244618693	1.0533021942812597	1.189493130526913	1.2502238073781065	0.8095915510853796	0.7280263610874376	0.9283039195997587	0.9049212375899042	0.7073327918050967	0.7340599128602829	1.0	8.8431618352403	-7.2687862157895475	24.947943547301808	0.8210538050341118	1.1668550560711497	0.6998864732462274	0.10010048313841782	285.9783610164517	971107.5534924688	0.028584322281068178	0.04336686525925006	5.3853481445373944e-08	7.2687862157895475	0.34580125103703785	
TSPYGSSLDLSTGSSS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TSPYGSSLDLSTGSSSR	17	0	J3KNZ9	J3KNZ9	FBRS		1	T(0.029)S(0.022)PYGS(0.003)S(0.008)LDLS(0.005)T(0.001)GS(0.002)S(0.007)S(0.922)R	84.41	0.011477	18609000.0	702.25	435.57	802.38	729.16	528.2	800.33	533.33	1058.2	781.35	677.41	True	False	671.3799308504072	507.54053907589946	633.97140317148	665.2356748939328	597.6675582521564	954.9824456080398	652.9428287650057	1020.98250620653	745.0252090440993	554.7244847628901	1.2102943881003916	0.9149416566547286	1.1428581585730129	1.1992181581425583	1.0774133370147194	1.7215437065415182	1.1770578849500357	1.8405217982093145	1.3430544883241466	1.0	9.115627595184646	-8.231930135680836	24.8168397366159	1.4540071030250106	1.1050663362718058	0.28526107972086356	0.239662492491237	712.9814891299899	599607.5889154816	0.07377301013732418	0.07376159218989065	5.862324632893484e-09	8.231930135680836	-0.34894076675320473	
TSQCSSPSLSASPGSPT(ph)RPQIR	ddPTM_K562_Methotrexat_30min_R1	2	TSQCSSPSLSASPGSPTRPQIR	22	1	H0YMD3;H0YND9;P37275-3;P37275-4;P37275-5;P37275;P37275-2	H0YMD3	ZEB1	Zinc finger E-box-binding homeobox 1	1	TSQCSSPSLSASPGS(0.404)PT(0.596)RPQIR;TSQCSSPSLSASPGS(0.001)PT(0.999)RPQIR	123.83	4.9594e-06	121489000.0	1755.67	1294.6399999999999	2305.0	2012.73	1245.9099999999999	1304.78	1395.31	1390.13	1594.9099999999999	2048.58	True	False	1678.4928489799006	1508.5572548826192	1821.2119996887527	1836.27708586492	1409.7690032221587	1556.9102687397167	1708.2437860313512	1341.2383399668158	1520.762982218627	1677.5623108539314	1.0005546966094485	0.8992555716840804	1.0856300167841153	1.0946103605118536	0.8403675941578245	0.9280789504308791	1.0182893207476758	0.7995162571839635	0.9065314429033109	1.0	10.712150639099715	-7.763992501720405	24.9999809476843	0.9112117671959354	1.0160741044412556	0.2958080876598892	0.078767739649426	91.14535273605077	892489.9409661787	0.024828112725831738	0.02945262419176899	1.7218983040385222e-08	7.763992501720405	0.10486233724532013	
TSQEELLAEVVQGQS(ph)RTPR	ddPTM_K562_Methotrexat_30min_R1	1	TSQEELLAEVVQGQSRTPR	19	1	G3V5I6;G3V256;H0YJA2;Q6PJT7-10;Q6PJT7-4;Q6PJT7-3;Q6PJT7-11;Q6PJT7-5;Q6PJT7-9;Q6PJT7-2;Q6PJT7;A0A087WTC9	G3V5I6	ZC3H14	Zinc finger CCCH domain-containing protein 14	1	TSQEELLAEVVQGQS(0.5)RT(0.5)PR	60.034	0.029766	17140000.0	1673.6	1438.0	1782.2	1686.9	1450.6	1107.5	1200.5	1641.2	1644.1	1947.6	True	False	1600.0305479120566	1675.6050581792665	1408.140575204032	1539.0120960812105	1641.3793260139691	1321.5087007995508	1469.7426845150087	1583.4780657589856	1567.6661498552548	1594.870767370136	1.0032352342568978	1.0506212117375864	0.8829182928256859	0.9649760517079176	1.029161333692587	0.8285992369015918	0.9215434344806147	0.9928566615902451	0.9829424314048089	1.0	10.63922381158152	-6.741133477052968	24.99716151162226	0.9480760243857832	1.0269282523084686	0.21984624493033433	0.057553846443610356	364.2205513498603	448359.5923952976	0.014900794233493083	0.03931656658874725	1.8149577638010824e-07	6.741133477052968	0.07885222792268543	
TSQEELLAEVVQGQSRT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	TSQEELLAEVVQGQSRTPR	19	1	G3V5I6;G3V256;H0YJA2;Q6PJT7-10;Q6PJT7-4;Q6PJT7-3;Q6PJT7-11;Q6PJT7-5;Q6PJT7-9;Q6PJT7-2;Q6PJT7;A0A087WTC9	G3V5I6	ZC3H14	Zinc finger CCCH domain-containing protein 14	1	TSQEELLAEVVQGQS(0.176)RT(0.824)PR	80.453	0.032682	11788000.0	1065.1	1145.0	1508.1	1153.9	944.9	1035.2	1107.1	1211.6	1297.3	1355.1	True	False	1018.2794793147298	1334.1917883277206	1191.5704194059037	1052.7393785453248	1069.1709121402166	1235.2377490453227	1355.3953569567393	1168.987341258583	1236.9888061597362	1109.6782588125245	0.9176348831096309	1.202323085752306	1.0737981121492033	0.948688838575489	0.9634963140436263	1.1131494550205574	1.2214309383759203	1.0534470978187187	1.1147274413427255	1.0	10.115925725471065	-8.302605052492906	23.110990447490316	1.1114465045030084	1.030146311527324	0.15062734454318527	0.09120371869573635	417.35508566309215	234306.96230351928	0.03290345170204985	0.029018712696348873	4.981899330835214e-09	8.302605052492906	-0.08130019297568447	
TSQLGDS(ph)PFYPGK	ddPTM_K562_Methotrexat_30min_R1	1	TSQLGDSPFYPGK	13	0	P49790-2;P49790;P49790-3	P49790-2	NUP153	Nuclear pore complex protein Nup153	1	TSQLGDS(0.999)PFYPGK	112.03	0.0016129999999999999	9555800.0	3924.0	2874.9	4916.5	4130.8	2760.0	2571.0	2608.0	3325.2	3473.5	4960.6	True	False	3751.505658464934	3349.9283600553395	3884.593837947834	3768.6591774807393	3122.988377084348	3067.8093632105133	3192.9103883508046	3208.250831258698	3312.0177431556644	4062.187270803196	0.9235186386971194	0.8246612321723352	0.9562813280097134	0.9277413684415345	0.768794781946834	0.7552112097982944	0.7860076789909999	0.7897840787198239	0.8153286695964649	1.0	11.988041035480624	-7.757036373472882	24.999961602524337	0.8038191083612022	0.9055393156951479	0.24954793232645034	0.07256396371558221	133.79149695307828	759653.5913934938	0.020719461231921667	0.02582051103409247	1.7497001398232164e-08	7.757036373472882	0.10172020733394571	
TSQVGAASAPAKES(ph)PR	ddPTM_K562_Methotrexat_30min_R1	6	TSQVGAASAPAKESPR	16	1	Q13428;Q13428-3;Q13428-4;E7ETY2;Q13428-6;Q13428-7;Q13428-2;Q13428-8;A0A6I8PRA0;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857	Q13428	TCOF1	Treacle protein	1	TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;T(0.002)SQVGAASAPAKES(0.998)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR	209.73	1.1941e-21	1204152100.0	30454.300000000003	21511.899999999998	44276.09999999999	30176.899999999998	22547.5	19797.7	19177.1	26301.9	27930.7	33454.4	True	False	29115.565436949197	25066.375835220137	34983.1516787068	27531.338029659775	25512.89146098165	23623.325332568165	23478.05284066036	25376.847268941157	26632.207853392243	27395.48398023592	1.062787043950536	0.9149820405912126	1.2769678281261574	1.0049589943189858	0.9312809176646618	0.8623072820911241	0.8570044923315925	0.9263149826901733	0.9721386149850708	1.0	14.741650470680787	-7.629939240628303	4.082853336710207	0.9148444698104367	1.0776788879868844	0.37333977660508233	0.09183566588946913	0.22930148717197904	6.992303148571664	0.027893817631040495	0.036635986696062876	2.3445568043684584e-08	7.629939240628303	0.16283441817644773	
TSRDT(ph)SPSSGSAVSSSK	ddPTM_K562_Methotrexat_30min_R1	1	TSRDTSPSSGSAVSSSK	17	1	F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8-7;Q8NEY8-5;Q8NEY8-6;Q8NEY8-9;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8	F8WF16	PPHLN1	Periphilin-1	1	T(0.01)S(0.002)RDT(0.98)S(0.008)PSSGSAVSSSK	126.63	0.0016412	2770800.0	2649.4	1983.7	4094.5	3591.9	1814.6	1963.2	2016.9	2135.8	2401.4	3675.8	True	False	2532.9355483019854	2311.472707865239	3235.120404653189	3277.0037037845154	2053.251706180164	2342.56061526833	2469.2411665125546	2060.6827034170365	2289.7594381499957	3010.0770007697433	0.8414853000950666	0.7679114877374048	1.0747633378899932	1.0886776992570333	0.6821259740714614	0.7782394319711041	0.8203249172300625	0.6845946807640051	0.7606979614024669	1.0	11.555584677696155	-7.773947383351538	24.999956870776305	0.7730554057227169	0.9400849052750282	0.2750145036365397	0.12230905856882808	294.8122478960953	589244.0274567071	0.03912120292380581	0.04466154600680678	1.6828779366359038e-08	7.773947383351538	0.16702949955231128	
TSRDTS(ph)PSSGSAVSSSK	ddPTM_K562_Methotrexat_30min_R1	1	TSRDTSPSSGSAVSSSK	17	1	F8WF16;B7Z8L1;F8W6A0;F8W0Q9;Q8NEY8-7;Q8NEY8-5;Q8NEY8-6;Q8NEY8-9;Q8NEY8-8;Q8NEY8-2;Q8NEY8-3;Q8NEY8	F8WF16	PPHLN1	Periphilin-1	1	T(0.021)S(0.021)RDT(0.246)S(0.706)PS(0.004)S(0.001)GS(0.001)AVSSSK	74.703	0.017743000000000002	8904700.0	3079.3	2307.4	4209.3	4358.0	2576.6	2047.0	2237.5	2341.3	2695.3	4339.5	True	False	2943.9376590497127	2688.6586309060103	3325.8254534880134	3975.9409062314994	2915.4680624621496	2442.5537792656246	2739.3163320302647	2258.9551519385273	2569.996091299111	3553.5744993852495	0.8284440524770197	0.7566068001025825	0.9359098716133191	1.1188567755985748	0.8204325146318195	0.6873512233071726	0.7708622212659824	0.6356853225757093	0.7232143555013993	1.0	11.795055229850512	-7.997679354892445	24.983707847722076	0.7425372425098413	0.9094536514029659	0.22571140669751355	0.1250599434146957	100.19261662605614	1078633.8505371423	0.03970644877990468	0.044744440845104046	1.0053577846977468e-08	7.997679354892445	0.16691640889312453	
TSS(ph)DDES(ph)EEDEDDLLQR	ddPTM_K562_Methotrexat_30min_R1	2	TSSDDESEEDEDDLLQR	17	0	Q9Y5J1	Q9Y5J1	UTP18	U3 small nucleolar RNA-associated protein 18 homolog	2	T(0.038)S(0.056)S(0.906)DDES(1)EEDEDDLLQR;T(0.219)S(0.318)S(0.463)DDES(1)EEDEDDLLQR	147.64	1.2700999999999998e-09	17960000.0	2216.92	2066.7599999999998	2485.01	2351.41	1855.6999999999998	1690.23	1606.02	2031.3799999999999	1781.29	2440.1	True	False	2119.4668512650564	2408.256961086635	1963.4403606709543	2145.265536099543	2099.757076578053	2016.84302605185	1966.2108672926224	1959.9352140028543	1698.4782166995121	1998.1742449475628	1.0607017163914434	1.2052287067436573	0.9826171894846337	1.0736128450879119	1.0508378245227337	1.0093429194933785	0.9840037085175326	0.9808630148039407	0.8500150680022825	1.0	10.96446667928436	-8.247962090980284	0.6555299034857336	0.9337476915986468	1.1078285709008924	0.4743197588147755	0.062127008977810344	0.6533425691134545	0.6155333555905218	0.04675159777600826	0.050174696302457154	5.649862896033786e-09	8.247962090980284	0.17408087930224558	
TSS(ph)DPNLNNHCQEVR	ddPTM_K562_Methotrexat_30min_R1	1	TSSDPNLNNHCQEVR	15	0	J3QR65;Q9NYA4	J3QR65	MTMR4	Myotubularin-related protein 4	1	T(0.026)S(0.008)S(0.966)DPNLNNHCQEVR	236.03	3.3476e-48	7312600.0	2839.6	2379.8	3421.2	2472.7	2369.5	2388.3	1980.1	2427.3	2481.5	2848.5	True	False	2714.7745840410357	2773.0215003164267	2703.136873464278	2255.9222301144155	2681.130782428028	2849.805173922859	2424.1878297444127	2341.930483193264	2366.1356066333033	2332.609047470649	1.1638360860276975	1.1888068012611614	1.1588469471107508	0.9671240161571918	1.1494128368126226	1.2217243078144744	1.0392602362462182	1.0039961414591625	1.0143729868487859	1.0	11.187728812070409	-8.935411013502586	8.015711967073837	1.0097518644364836	1.1368519407088389	0.4952270459122764	0.06343513153950966	0.23938228048311438	26.089459407982655	0.028754052385952068	0.019332432884957947	1.1603499463151422e-09	8.935411013502586	0.1271000762723553	
TSS(ph)EDNLYLAVLR	ddPTM_K562_Methotrexat_30min_R1	3	TSSEDNLYLAVLR	13	0	Q15149-4	Q15149-4	PLEC	Plectin	1	T(0.133)S(0.021)S(0.845)EDNLYLAVLR;TS(0.047)S(0.953)EDNLYLAVLR;T(0.001)S(0.003)S(0.997)EDNLYLAVLR	230.57	2.784e-35	124260000.0	6522.9	5184.5	7538.299999999999	6845.700000000001	5088.099999999999	5599.700000000001	5042.3	6437.0	6201.299999999999	7181.5	True	False	6236.161126299929	6041.15050356774	5956.113846964737	6245.54810963492	5757.274333856114	6681.762773695027	6173.164130054167	6210.6070614736645	5913.0029165484975	5880.860759842187	1.060416388172958	1.0272561705286583	1.0127962708514406	1.0620125802472697	0.9789849766840273	1.1361878892494528	1.0497041814368384	1.0560710948783503	1.0054655530914447	1.0	12.521811617116827	-5.882203353009738	18.211728139299908	1.0402607317422867	3.8769005994590287	0.021631217249093226	0.04186176435314269	1221.166739997436	191078.09009824437	0.009835805949831775	1742.7081138666395	1.3115856215013087e-06	5.882203353009738	2.836639867716742	
TSS(ph)FTEQLDEGTPNR	ddPTM_K562_Methotrexat_30min_R1	1	TSSFTEQLDEGTPNR	15	0	E7EVX2;Q13439-5;Q86W71;Q13439-3;Q13439-4;Q13439;C9JHJ5;C9J0Y3	E7EVX2	GOLGA4	Golgin subfamily A member 4	1	T(0.167)S(0.167)S(0.622)FT(0.045)EQLDEGTPNR	164.63	6.7803e-06	14467000.0	1600.3	1566.3	1910.6	1626.3	1615.1	1379.9	1199.7	1661.6	1899.0	1542.0	True	False	1529.9527281451149	1825.1044524521471	1509.5911698938532	1483.7248039936405	1827.5139593583071	1646.5461455831141	1468.7632641504838	1603.1605861961543	1810.7159044918978	1262.728857714496	1.2116241097984304	1.4453652827381607	1.1954990659088691	1.1750145685900781	1.4472734571585357	1.3039585937422202	1.163165991794077	1.2696000225240993	1.4339704786419811	1.0	10.30232917111479	-12.03490778958125	5.682488430123027	0.9999990414455212	1.2922438733866783	0.40441888406799953	0.10699516840168286	1.2899802432336944e-06	2.1899482377205584e-07	0.10284776186506209	0.02494416443794874	9.227673304715521e-13	12.03490778958125	0.29224483194115713	
TSS(ph)FTEQLDEGTPNRENASTHASK	ddPTM_K562_Methotrexat_30min_R1	1	TSSFTEQLDEGTPNRENASTHASK	24	1	E7EVX2;Q13439-5;C9JHJ5	E7EVX2	GOLGA4	Golgin subfamily A member 4	1	T(0.124)S(0.037)S(0.653)FT(0.185)EQLDEGT(0.001)PNRENASTHASK	97.085	2.6787e-06	23059000.0	1061.7	454.76	1448.0	847.81	644.58	591.86	505.5	807.92	794.86	1174.1	True	False	1015.0289392436846	529.9013604016717	1144.084588090809	773.4838136099416	729.3535681525464	706.2285685374467	618.8712428340998	779.5049956665847	757.9071320929064	961.459112738384	1.0557172175036393	0.5511428966463595	1.1899461692471553	0.8044895548464254	0.7585903118388829	0.7345383274032306	0.6436792107273901	0.8107521009878768	0.7882884691105271	1.0	9.909081696217882	-5.943767385844052	16.75916418683312	0.8056798291697811	3.246149949214041	0.16136938978945403	0.16854149132891805	46714229.13370535	303473279.4773554	0.04075611042954017	3862468029.5805326	1.138236778008646e-06	5.943767385844052	2.4404701200442602	
TSS(ph)GTSLSAMHSSGSSGK	ddPTM_K562_Methotrexat_30min_R1	4	TSSGTSLSAMHSSGSSGK	18	0	A6NNK5;Q12888;Q12888-3;Q12888-2;M0R142	A6NNK5	TP53BP1	Tumor suppressor p53-binding protein 1	1	T(0.144)S(0.144)S(0.645)GT(0.033)S(0.033)LS(0.001)AMHSSGSSGK;T(0.104)S(0.026)S(0.806)GT(0.063)SLSAMHSSGSSGK;TSS(0.996)GT(0.004)SLSAMHSSGSSGK;T(0.059)S(0.04)S(0.894)GT(0.006)SLSAMHSSGSSGK	305.9	1.941199999999999e-226	63190700.0	20722.0	16007.3	28892.0	23854.2	15187.699999999997	15158.400000000001	14177.399999999998	17317.7	19303.5	24281.8	True	False	19811.08569182222	18652.234247422097	22827.96403254118	21762.939322034752	17185.14875892895	18087.546266546196	17357.042845017146	16708.62667523419	18406.084498346157	19884.130724547234	0.9963264658768894	0.9380462493336787	1.1480493841432928	1.094487841762582	0.8642645231513011	0.9096473221339704	0.8729093107193082	0.8402995789304061	0.9256670433987638	1.0	14.27932987270604	-7.7664515394576545	24.99883043574077	0.893060964041644	1.0440589669353548	0.5234518335472143	0.06608138940412668	98.09743083806453	489273.8144834846	0.021023936351303344	0.024579399165828804	1.7121762184096136e-08	7.7664515394576545	0.1509980028937108	
TSS(ph)LDTLAAPYLAGHWPR	ddPTM_K562_Methotrexat_30min_R1	2	TSSLDTLAAPYLAGHWPR	18	0	Q6P1L5-2;Q6P1L5	Q6P1L5-2	FAM117B	Protein FAM117B	1	T(0.11)S(0.11)S(0.777)LDT(0.004)LAAPYLAGHWPR;T(0.016)S(0.326)S(0.658)LDTLAAPYLAGHWPR	157.62	1.5925e-14	6548800.0	1262.0	964.06	1857.0	1443.6	1148.23	1023.98	1066.6100000000001	1202.7	1653.17	2081.61	True	False	1206.5239910761334	1123.354528781853	1467.2410774065143	1317.041829333591	1299.2423710940434	1221.8496428394794	1305.8244437572284	1160.4003593031512	1576.3144875349499	1704.6102577866861	0.7078004990083293	0.6590096027231751	0.8607487082188636	0.7726351659080565	0.7621932140552857	0.7167912062350037	0.766054549884469	0.6807423303963028	0.9247360094979605	1.0	10.735226203716081	-9.906296271103605	4.707667155294681	0.9974846604736635	0.7443590112459044	0.7350614690192195	0.05395413520961144	0.09793801044944024	3.436373070937769	0.053106762000557334	0.013901414098244273	1.2408055543724877e-10	9.906296271103605	-0.25312564922775904	
TSS(ph)LTQFPPSQSEER	ddPTM_K562_Methotrexat_30min_R1	7	TSSLTQFPPSQSEER	15	0	B7Z7F3;Q9H6Z4-3;Q9H6Z4-2;Q9H6Z4	B7Z7F3	RANBP3	Ran-binding protein 3	1	T(0.056)S(0.087)S(0.82)LT(0.036)QFPPSQSEER;T(0.028)S(0.278)S(0.694)LTQFPPSQSEER;TS(0.001)S(0.999)LTQFPPSQSEER;T(0.005)S(0.005)S(0.99)LTQFPPSQSEER;T(0.002)S(0.079)S(0.918)LTQFPPSQSEER;T(0.235)S(0.008)S(0.757)LTQFPPSQSEER;TS(0.001)S(0.981)LT(0.019)QFPPSQSEER	248.81	3.6900999999999985e-75	111945100.0	8667.83	6342.0	9107.519999999999	8271.560000000001	6801.17	6310.48	6666.74	7872.689999999999	8246.310000000001	9447.55	True	False	8286.802571766591	7389.907704431785	7195.976013624857	7546.405177225382	7695.6430654256355	7529.890949184241	8161.926151239968	7595.803030416831	7862.9408480097845	7736.507146368726	1.0711296990989216	0.9551994930813675	0.930132406974176	0.975427933362335	0.9947180193632638	0.973293348887881	1.0549885105542647	0.9818129663309446	1.0163424784917832	1.0	12.917466654653897														
TSS(ph)PRSPPSSS(ph)EIFTPAHEENVR	ddPTM_K562_Methotrexat_30min_R1	1	TSSPRSPPSSSEIFTPAHEENVR	23	1	I3L3A7;I3L2L5;I3L317;I3L4Q0;C9JLW8	I3L3A7	FAM195B	Protein FAM195B	2	T(0.287)S(0.33)S(0.381)PRS(0.003)PPS(0.089)S(0.062)S(0.845)EIFT(0.002)PAHEENVR	76.208	0.0045796000000000005	19279000.0	1231.3	1137.7	1551.7	1268.8	1032.2	1167.5	1121.3	1067.2	1163.0	1643.5	True	False	1177.1735263169908	1325.6855874065045	1226.019375235157	1157.566273939083	1167.9523923284291	1393.1028516329347	1372.7800684270542	1029.665971105282	1108.9323838462751	1345.8462241593866	0.874671641667124	0.9850201037897369	0.91096542326069	0.8601029249549643	0.8678200907075624	1.0351129472485348	1.0200125718556667	0.7650695544718787	0.8239666344785509	1.0	10.394297862280066	-9.262916851237561	24.99865264375696	0.8458885776946343	0.9353899446727517	0.13794829989716417	0.08052858763980196	227.32205335077845	3846167.9853067505	0.04207385634858211	0.021894141659931268	5.458623603123847e-10	9.262916851237561	0.08950136697811739	
TSS(ph)SSPANS(ph)DVEIDGIGR	ddPTM_K562_Methotrexat_30min_R1	1	TSSSSPANSDVEIDGIGR	18	0	O60293-2;O60293	O60293-2	ZFC3H1	Zinc finger C3H1 domain-containing protein	2	T(0.027)S(0.006)S(0.58)S(0.266)S(0.123)PANS(0.999)DVEIDGIGR	181.49	6.524199999999998e-69	0.0	2513.4	1541.1	2496.5	2278.2	1616.6	1639.4	1730.1	1762.8	2140.3	2157.9	True	False	2402.913945460183	1795.7405807789062	1972.5187666910942	2078.4737431336853	1829.211235650202	1956.1908479375022	2118.1189658304174	1700.8013248354478	2040.797920160089	1767.0833995214725	1.3598192061058885	1.0162172205710234	1.1162567466964228	1.1762171178205496	1.0351584063013404	1.107016708134568	1.1986525177046006	0.9624906924574279	1.1548962096032018	1.0	10.787154415800442	-6.25142380952437	24.56272437572362	1.090515908078236	1.3598193956173097	0.5413480776796384	0.07568768467351338	828.2659363011912	2031233.561242799	0.0178062830603616	0.22973103389933908	5.605007402165931e-07	6.25142380952437	0.2693034875390736	
TSS(ph)TDEVLSLEEK	ddPTM_K562_Methotrexat_30min_R1	2	TSSTDEVLSLEEK	13	0	K7ENH8;A0A0A0MRB7;P15923-2;K7EMM4	K7ENH8	TCF3	Transcription factor E2-alpha	1	T(0.005)S(0.001)S(0.905)T(0.089)DEVLSLEEK;T(0.146)S(0.098)S(0.725)T(0.03)DEVLSLEEK	185.66	0.00013095	11728800.0	3930.8999999999996	2780.3	5862.6	4223.7	3250.7	2953.3999999999996	2614.5	3739.0	4164.7	5046.3	True	False	3758.10234272676	3239.697317980402	4632.120377169318	3853.414778717297	3678.224028039162	3524.1027511886155	3200.8681788125696	3607.4972507146235	3971.0840060228584	4132.366170353217	0.9094311074581112	0.7839811827961719	1.1209365739177426	0.9324959647484297	0.8901011857148088	0.8528050530641601	0.7745848375626821	0.8729858637881236	0.960970989093986	1.0	12.01275238222102	-7.798774525848056	4.668846777499859	0.8768769065626786	0.9392499435877468	0.03782250436610102	0.09558361516023141	0.5622627311706286	27.760502010870837	0.030675826376271996	0.036272082393449	1.5893716939741883e-08	7.798774525848056	0.062373037025068245	
TSS(ph)TNEDEDLNPEQKIER	ddPTM_K562_Methotrexat_30min_R1	1	TSSTNEDEDLNPEQKIER	18	1	Q99081;Q99081-3;B4DGI9;F5GY10;Q99081-4;Q99081-2;B4DZP2	Q99081	TCF12	Transcription factor 12	1	T(0.134)S(0.134)S(0.699)T(0.033)NEDEDLNPEQKIER	100.9	0.00076136	6393300.0	600.3	403.04	879.66	846.82	393.72	504.01	399.49	524.16	615.68	761.04	True	False	573.9115307789245	469.63550949135737	695.0313872651659	772.580605372868	445.5010810962497	601.4027993588998	489.08580178000875	505.7249957032835	587.057171183555	623.2082813716211	0.9208984346546244	0.7535771322835042	1.1152473547615078	1.2396828291056932	0.7148510288017114	0.9650109238524085	0.784787071031178	0.8114863213791572	0.9419919290730525	1.0	9.283570594250026	-7.79233470961025	24.999691732722738	0.8607834237577723	0.9969323057209205	0.17911966612078467	0.1429233316259773	376.68892078200355	304804.63872187515	0.04638231889698065	0.05259805405929061	1.613114854270889e-08	7.79233470961025	0.13614888196314823	
TSS(ph)VPEYVYNLHLVENDFVGGR	ddPTM_K562_Methotrexat_30min_R1	2	TSSVPEYVYNLHLVENDFVGGR	22	0	Q99959-2;Q99959	Q99959-2	PKP2	Plakophilin-2	1	T(0.163)S(0.12)S(0.717)VPEYVYNLHLVENDFVGGR;T(0.16)S(0.16)S(0.672)VPEY(0.008)VYNLHLVENDFVGGR	133.29	1.3605e-14	1913900.0	913.28	957.48	996.53	870.3699999999999	905.01	649.21	889.06	785.3399999999999	1151.81	1167.48	True	False	873.1333047305952	1115.687295622729	787.371971388214	794.066013436601	1024.0346779511244	774.6606443756898	1088.4543366055095	757.7191470650506	1098.2626045038505	956.0380588874964	0.9132829981126754	1.1669904615732662	0.8235780616353784	0.830579918921454	1.0711233391092745	0.8102822237821072	1.13850523678116	0.7925616977495419	1.148764522807654	1.0	9.90092424132315	-8.759467784870845	24.999504445659216	1.0026713093793422	0.9427174252463514	0.07314289495302828	0.1399672292643284	207.93879997574857	2636685.565714959	0.05351231031553321	0.03932412401234843	1.7399317580419818e-09	8.759467784870845	-0.05995388413299085	
TSSDS(ph)ALHTSVMNPSPQDTYPGPTPPSILPSR	ddPTM_K562_Methotrexat_30min_R1	2	TSSDSALHTSVMNPSPQDTYPGPTPPSILPSR	32	0	Q53ET0;H0YDQ8	Q53ET0	CRTC2	CREB-regulated transcription coactivator 2	1	T(0.064)S(0.064)S(0.133)DS(0.732)ALHT(0.005)S(0.001)VMNPS(0.001)PQDTYPGPTPPSILPSR;T(0.091)S(0.091)S(0.091)DS(0.728)ALHTSVMNPSPQDTYPGPTPPSILPSR	143.48	1.04e-28	88170000.0	460.93	323.84	257.98	528.0	440.4	140.27	123.06	473.78999999999996	426.75	222.19	True	False	440.6680691019985	377.3490556611779	203.83352350529466	481.7110597728848	498.3203192999803	167.37519228998005	150.6593375730254	457.1265371532714	406.9104856460859	181.94923793487914	2.421928632972437	2.073924903143775	1.1202768740270737	2.64750248607962	2.738787614369303	0.9199004853754033	0.8280295058281442	2.512385005519397	2.236395657736813	1.0	7.507392198470803	-8.25848155838023	24.999617665090664	1.551909168379104	2.158275851674674	0.21712167570604235	0.6595060914127444	539.181106351077	4557189.775722757	0.24045299775772683	0.23062456662381434	5.5146561898905365e-09	8.25848155838023	0.6063666832955701	
TSSDSMSRLMDSDMDYER	ddPTM_K562_Methotrexat_30min_R1	1	TSSDSMSRLMDSDMDYER	18	1	E5RI44;Q9BYZ6-2	E5RI44	RHOBTB2		0		52.343999999999994	0.032961000000000004	15778000.0	0.0	0.0	58.099	0.0	0.0	0.0	0.0	0.0	99.227	0.0	False	True	0.0	0.0	45.90481386981209	0.0	0.0	0.0	0.0	0.0	94.6139584281293	0.0											0.0														
TSSGDPPS(ph)PLVK	ddPTM_K562_Methotrexat_30min_R1	1	TSSGDPPSPLVK	12	0	F5GX58;F8WDL1;Q99618	F5GX58	CDCA3	Cell division cycle-associated protein 3	1	TS(0.001)S(0.02)GDPPS(0.979)PLVK	89.23100000000001	0.019205	17860000.0	3832.5	2763.9	5269.6	3993.4	3102.6	2793.7	2343.4	3635.8	3079.0	5201.6	True	False	3664.027888905925	3220.5874967327386	4163.582973344837	3643.30482215348	3510.6462821528585	3333.5429863870904	2868.967102784231	3507.9268532089445	2935.857962048738	4259.539835465446	0.8601933613576714	0.7560881271534864	0.9774724815761411	0.8553282661706509	0.8241843996674925	0.782606364807674	0.673539211653067	0.8235459671022488	0.6892429876120486	1.0	12.056481867002748	-8.04528875508954	2.8508631340854516	0.7756283927339737	0.8621576148212898	0.08452915024072594	0.09754896634143471	0.5386672435554745	8.724742794466458	0.03244725165587351	0.03428012778527485	9.009718973692294e-09	8.04528875508954	0.08652922208731617	
TSSLPNHS(ph)EPDHDTDAGLER	ddPTM_K562_Methotrexat_30min_R1	1	TSSLPNHSEPDHDTDAGLER	20	0	Q69YN4;Q69YN4-3;Q69YN4-4;Q69YN4-2	Q69YN4	KIAA1429	Protein virilizer homolog	1	TSSLPNHS(1)EPDHDTDAGLER	85.01299999999999	0.0018965999999999998	7493300.0	643.6	724.65	679.23	731.53	733.91	745.47	626.12	700.24	780.98	792.1	True	False	615.3081146248807	844.3860955560543	536.6689052271547	667.3979006735952	830.4320289224535	889.5215270293821	766.5433482953247	675.6121623001899	744.6724102633398	648.6430143940674	0.9486082497931058	1.3017732047031156	0.8273717488940912	1.0289140341656924	1.280260498447216	1.3713575993111284	1.181764593597596	1.0415777975059453	1.1480466045856959	1.0	9.341280888245189	-7.735328535559555	24.196687366001864	1.183186054241748	1.0320817553089936	0.17997567760921818	0.14876032807372522	276.03641568189187	255798.52152421742	0.0450323376838417	0.05811347222507373	1.8393800188443048e-08	7.735328535559555	-0.15110429893275446	
TSSPRS(ph)PPSSSEIFTPAHEENVR	ddPTM_K562_Methotrexat_30min_R1	2	TSSPRSPPSSSEIFTPAHEENVR	23	1	I3L3A7;I3L2L5;I3L317;I3L4Q0;C9JLW8	I3L3A7	FAM195B	Protein FAM195B	1	T(0.224)S(0.224)S(0.224)PRS(0.326)PPS(0.001)S(0.001)S(0.001)EIFTPAHEENVR;T(0.124)S(0.124)S(0.124)PRS(0.619)PPS(0.003)S(0.004)S(0.001)EIFTPAHEENVR	93.729	7.7636e-05	254825000.0	1100.9	1043.53	1472.52	997.14	1125.54	875.4300000000001	706.8	1042.05	1022.71	1132.99	True	False	1052.5057541804397	1215.9555955228172	1163.4581751764345	909.7222843597236	1273.5682383853316	1044.5944577344928	865.3178920576493	1005.4005108604379	975.1644353253862	927.7945321024299	1.1344168539077373	1.310587154213336	1.2540041301385756	0.9805212823341892	1.372683492216063	1.1258898620229938	0.9326611249764477	1.0836456522136952	1.051056458713562	1.0	9.857661533556833	-8.526225658291176	24.09370947017329	1.024591819292799	1.2100162317659184	0.4299041301828097	0.10494618786810195	64.05638714016324	461112.68761899514	0.039044123614699014	0.03042061605302042	2.976969201987356e-09	8.526225658291176	0.18542441247311947	
TSSS(ph)SPANS(ph)DVEIDGIGR	ddPTM_K562_Methotrexat_30min_R1	1	TSSSSPANSDVEIDGIGR	18	0	O60293-2;O60293	O60293-2	ZFC3H1	Zinc finger C3H1 domain-containing protein	2	T(0.003)S(0.014)S(0.102)S(0.594)S(0.296)PANS(0.991)DVEIDGIGR	130.47	1.7774000000000001e-06	26749000.0	5319.7	4213.8	5945.8	6174.0	4189.6	4300.4	4538.4	5100.6	4652.1	5892.6	True	False	5085.852357628924	4910.05882764659	4697.857834164594	5632.73500575339	4740.605835011806	5131.3914373980915	5556.2517279491185	4921.209006952397	4435.824886406928	4825.393039538544	1.0539768089264887	1.017545884327827	0.9735699860448785	1.167311130844598	0.982428953697242	1.0634141914145112	1.151460965443028	1.019856614088998	0.9192670628196391	1.0	12.236430742711052	-9.536212285561126	13.708800207554129	0.9629114143324103	1.0573104601336987	0.2861826092482246	0.06204366311481624	1.601300324334778	1632.0774184552301	0.04086458364900528	0.01565786318948905	2.909294691004405e-10	9.536212285561126	0.09439904580128833	
TSSSS(ph)PANS(ph)DVEIDGIGR	ddPTM_K562_Methotrexat_30min_R1	2	TSSSSPANSDVEIDGIGR	18	0	O60293-2;O60293	O60293-2	ZFC3H1	Zinc finger C3H1 domain-containing protein	2	T(0.003)S(0.004)S(0.176)S(0.079)S(0.739)PANS(0.999)DVEIDGIGR;T(0.001)S(0.001)S(0.011)S(0.097)S(0.891)PANS(1)DVEIDGIGR	139.12	1.8178000000000002e-08	89402000.0	6502.0	5719.6	7869.3	7911.9	5853.7	5523.5	5613.5	5570.0	6792.7	7021.1	True	False	6216.179865274969	6664.666683422905	6217.641470347374	7218.2760110172085	6623.564153238639	6590.838202136629	6872.470270324868	5374.099942893943	6476.908859632499	5749.5107541499665	1.0811667515863266	1.1591710961862944	1.081420965402928	1.2554591720360024	1.1520222217964868	1.1463302677326757	1.1953139256873908	0.9347056076058204	1.1265147830113198	1.0	12.48922348200751	-9.248377657935867	24.968143152681385	1.0229576408969248	1.1541175758030073	0.4693220411186866	0.06457864616635323	624.0339283465679	1192875.5140484234	0.029157694665648718	0.01670762093576926	5.644459250687896e-10	9.248377657935867	0.13115993490608258	
TSSSS(ph)PANSDVEIDGIGR	ddPTM_K562_Methotrexat_30min_R1	1	TSSSSPANSDVEIDGIGR	18	0	O60293-2;O60293	O60293-2	ZFC3H1	Zinc finger C3H1 domain-containing protein	1	TSS(0.01)S(0.062)S(0.897)PANS(0.031)DVEIDGIGR	139.12	1.0099e-08	21047000.0	2851.7	2379.0	4349.9	3276.7	3118.7	2559.6	2165.0	3166.7	2956.3	3235.3	True	False	2726.3426825291663	2772.089313914102	3436.915434900698	2989.436798404944	3528.863714352518	3054.206474552169	2650.556361495206	3055.325366097354	2818.8622582671915	2649.3558193020135	1.0290587102971451	1.0463257874679979	1.2972645689419593	1.1283636484858899	1.331970469441215	1.152810978540744	1.0004531449435543	1.1532333044272987	1.0639802467189308	1.0	11.37142590121567	-8.604211891396934	8.339466456456979	1.0677813259310802	1.172666170765779	0.2273991505146773	0.09793077563783188	0.4539044516282189	41.29435105648096	0.038819044043530704	0.03001500045664727	2.487643306025557e-09	8.604211891396934	0.10488484483469884	
TSSSSLQADQASSNAPGPRPSSGSHRS(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	2	TSSSSLQADQASSNAPGPRPSSGSHRSPAR	30	2	Q9ULC8-2;Q9ULC8;Q9ULC8-3	Q9ULC8-2	ZDHHC8	Probable palmitoyltransferase ZDHHC8	1	TSSSSLQADQAS(0.056)S(0.043)NAPGPRPS(0.03)S(0.079)GS(0.304)HRS(0.488)PAR;TSSSSLQADQAS(0.064)S(0.022)NAPGPRPS(0.085)S(0.085)GS(0.085)HRS(0.66)PAR	78.653	3.9938e-05	10550900.0	1902.17	1657.56	2336.8	1909.67	1605.3	1520.35	1779.5	1897.32	1856.47	2192.01	True	False	1818.5528843940467	1931.4436162973766	1846.3376142614645	1742.2521960539475	1816.4250875846014	1814.1361203255944	2178.5981733398226	1830.5901801887867	1770.1631149089385	1795.015747988813	1.0131124957714746	1.0760037166589882	1.028591318115261	0.9706055214312279	1.0119271040489624	1.0106519245628929	1.2136930697019155	1.01981845130876	0.9861546434298862	1.0	10.809780785783229														
TSSTCS(ph)NESLSVGGTSVTPR	ddPTM_K562_Methotrexat_30min_R1	1	TSSTCSNESLSVGGTSVTPR	20	0	A0A3B3IRT3;O60343-2;O60343-3;O60343;Q5JU47	A0A3B3IRT3	TBC1D4	TBC1 domain family member 4	1	T(0.002)S(0.001)S(0.001)T(0.004)CS(0.991)NES(0.001)LSVGGTSVTPR	110.77	0.00026949	0.0	417.89	456.02	639.04	583.66	490.58	553.25	378.56	439.77	413.79	779.13	True	False	399.5200559673573	531.3695539853336	504.9142369983084	532.4914339906097	555.0998688514632	660.1577324761632	463.4617164931292	424.30303983599094	394.5529932173263	638.0220070759373	0.6261853847304776	0.8328389116554252	0.7913743278422897	0.8345972836125584	0.8700324795934433	1.0346942976178428	0.7264039662474653	0.6650288471718664	0.6184002884564554	1.0	9.317462377012127	-12.0516420340301	4.083046508654451	1.0000279239011904	0.7868716905056287	0.2310845972114356	0.12060160839034019	50726139.80457305	102701325.9831373	19832.11688080773	0.032358259602499	8.878875492558342e-13	12.0516420340301	-0.21315623339556178	
TSSVSSISQVS(ph)PER	ddPTM_K562_Methotrexat_30min_R1	2	TSSVSSISQVSPER	14	0	P42356	P42356	PI4KA	Phosphatidylinositol 4-kinase alpha	1	TSSVSSISQVS(1)PER;TSSVSSISQVS(1)PER	197.17	1.5254000000000002e-08	150705000.0	1072.98	966.09	1451.65	1249.25	1271.08	889.6800000000001	938.13	1160.02	1024.25	1273.18	True	False	1025.813083949976	1125.7199517777533	1146.9685029710095	1139.7301920857496	1438.249299400134	1061.5980685574214	1148.5295332145486	1119.2214390944055	976.6328410615191	1042.5947646335542	0.983903927726439	1.0797291430610776	1.1001095937539453	1.09316700097409	1.379490237422823	1.0182269320434831	1.1016068487723778	1.0734961243429835	0.9367329226948314	1.0	10.025962805265745	-9.618182428757219	4.126836599696408	0.9696170402600209	1.1118055417793535	0.22961975545995505	0.1003225452240773	0.3332419428457403	10.199255329649386	0.07856603297987193	0.02669358052006808	2.4088933418483984e-10	9.618182428757219	0.1421885015193326	
TST(ph)SAGVTST(ph)APRAS(ph)T(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TSTSAGVTSTAPRASTR	17	1	M0R2K1	M0R2K1	RSPH6A		4	T(0.014)S(0.127)T(0.524)S(0.316)AGVT(0.223)S(0.539)T(0.839)APRAS(0.498)T(0.919)R	47.903999999999996	0.030764999999999997	15064000.0	141.97	0.0	108.24	0.0	68.681	0.0	0.0	0.0	174.82	0.0	True	False	135.72916879007815	0.0	85.52190318711959	0.0	77.71375533569932	0.0	0.0	0.0	166.69265635770063	0.0											0.0														
TSVPS(ph)PEQPQPYR	ddPTM_K562_Methotrexat_30min_R1	1	TSVPSPEQPQPYR	13	0	Q8TEH3	Q8TEH3	DENND1A	DENN domain-containing protein 1A	1	T(0.054)S(0.004)VPS(0.939)PEQPQPY(0.003)R	159.66	2.3355999999999998e-07	20269000.0	2402.3	1882.4	2474.1	2290.5	2168.7	1824.4	2190.1	2274.5	1984.7	2516.6	True	False	2296.6977684328017	2193.434604670829	1954.820220576981	2089.6954212306664	2453.9220628198645	2176.9394796737683	2681.2856754321683	2194.504545801128	1892.4317301975082	2060.819353647404	1.1144585595859826	1.0643507402959467	0.9485645683194807	1.014011935365492	1.1907506878158514	1.056346581674345	1.3010774916717531	1.0648699226922134	0.9182909345489841	1.0	11.00900233198503	-6.2557196587138195	20.64980538944607	1.0703253049828572	1.11445877063666	0.015998147709003208	0.10680200294269881	380.76041138895306	1374097.964886272	0.027651897619063823	0.2194964153895996	5.549838447932652e-07	6.2557196587138195	0.04413346565380283	
TSVSQNVIPSS(ph)AQK	ddPTM_K562_Methotrexat_30min_R1	1	TSVSQNVIPSSAQK	14	0	H0Y8J2;Q03188;Q03188-2	H0Y8J2	CENPC	Centromere protein C	1	TSVSQNVIPS(0.168)S(0.832)AQK	146.27	1.7958e-08	19309000.0	5394.5	3069.2	5150.8	5455.0	3478.9	2850.6	2777.2	4073.9	4103.5	5923.8	True	False	5157.3642391919175	3576.333132520032	4069.7174698467784	4976.768619433876	3936.4363279125855	3401.438106094082	3400.057795447798	3930.6186278915006	3912.7291806648263	4850.9424172043655	1.0631674828587525	0.7372450185836465	0.838953984572793	1.025938506666922	0.8114786755562403	0.701191194113237	0.7009066492706951	0.810279382816658	0.8065915535892428	1.0	12.244049338879055	-7.980600863699037	24.9681589570681	0.7822645480099276	0.900595729575617	0.16421576534689408	0.11601762963691295	401.31785786509664	516524.14589448564	0.035331049371544264	0.04005654056553271	1.0456808057682734e-08	7.980600863699037	0.11833118156568934	
TTEENQELVT(ph)RWMAEKAQEANR	ddPTM_K562_Methotrexat_30min_R1	1	TTEENQELVTRWMAEKAQEANR	22	2	E7EVC7;Q676U5-3;Q676U5-2;Q676U5	E7EVC7	ATG16L1	Autophagy-related protein 16-1	1	T(0.006)T(0.006)EENQELVT(0.987)RWMAEKAQEANR	48.968	0.017275	2743600.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
TTEEQVQAST(ph)PCPR	ddPTM_K562_Methotrexat_30min_R1	3	TTEEQVQASTPCPR	14	0	Q14137	Q14137	BOP1	Ribosome biogenesis protein BOP1	1	TTEEQVQAS(0.001)T(0.999)PCPR;TTEEQVQAS(0.079)T(0.921)PCPR;TTEEQVQAS(0.246)T(0.754)PCPR	176.43	4.9021e-08	33948100.0	7904.200000000001	6560.200000000001	6395.599999999999	8075.9	6455.0	6560.7	5780.4	7335.9	8315.3	9844.4	True	False	7556.74083222185	7644.161545665942	5053.250961045284	7367.898385643634	7303.945642782411	7828.462422876396	7076.80184387385	7077.892238972296	7928.723517968125	8061.483765813607	0.9373883334315919	0.9482325794765716	0.6268388187388831	0.9139630618483331	0.9060299387758252	0.9710944846251026	0.8778535130076792	0.8779887728593544	0.9835315369103044	1.0	12.976829684776588	-7.491853324952116	24.998980795467254	0.927110270603393	0.8355344859974669	0.1878977342646443	0.09074324281736464	1213.7728840583686	978007.7794103925	0.025907628797950367	0.038375673238746126	3.2221568322985346e-08	7.491853324952116	-0.09157578460592608	
TTHLAGALS(ph)PGEAWPFESV	ddPTM_K562_Methotrexat_30min_R1	1	TTHLAGALSPGEAWPFESV	19	0	Q9Y3X0	Q9Y3X0	CCDC9	Coiled-coil domain-containing protein 9	1	T(0.002)T(0.002)HLAGALS(0.997)PGEAWPFESV	102.72	0.00057249	110200000.0	4493.8	2808.3	4086.6	4777.6	3618.1	2939.3	3700.7	5072.0	5171.5	6391.9	True	False	4296.257932724187	3272.323842061778	3228.878506693302	4358.755225702527	4093.943567800315	3507.27812574277	4530.676178746097	4893.614885163034	4931.07809377559	5234.26497122262	0.820794888364367	0.6251735172087454	0.6168733383665711	0.8327349206940146	0.7821429733321374	0.6700612492919975	0.8655802111003603	0.9349192125480004	0.942076513299591	1.0	12.35377124362826	-8.973533974323901	3.1262637441925514	0.9515706015977582	0.7227646077987225	0.6806510487549196	0.0725192035604237	0.16009223304680326	3.2123695601568905	0.03734044284722787	0.022258025259113978	1.062835435712747e-09	8.973533974323901	-0.22880599379903566	
TTHLAGALS(ph)PGGGQSAPAFPESGPSLR	ddPTM_K562_Methotrexat_30min_R1	4	TTHLAGALSPGGGQSAPAFPESGPSLR	27	0	A0A2R8Y4Z8	A0A2R8Y4Z8			1	TTHLAGALS(1)PGGGQSAPAFPESGPSLR;TTHLAGALS(1)PGGGQSAPAFPESGPSLR;TTHLAGALS(0.998)PGGGQS(0.001)APAFPESGPSLR;TTHLAGALS(0.999)PGGGQS(0.001)APAFPESGPSLR	123.99	1.1259000000000001e-14	185104000.0	7532.949999999999	6515.52	8794.4	8469.4	6690.2	6559.68	5947.8	6989.0	7437.5	9440.3	True	False	7201.810537699647	7592.098935096091	6948.575622586885	7726.900851591797	7570.078565351341	7827.245322312232	7281.745555150663	6743.19290859709	7091.732248372028	7730.5701916226635	0.9316014678327332	0.982087834002642	0.8988438692551816	0.9995253467803911	0.9792393546280401	1.0125055627584019	0.9419415870567509	0.8722762670086667	0.9173621185222637	1.0	12.916359113079801	-12.169748821462512	5.408771846528114	1.000001622649286	0.9497814719126784	0.11475931272764373	0.042854310767649235	9.003917608371806e-07	1.3821769198525469e-07	0.04455431430612248	0.010805659296685373	6.764741078087095e-13	12.169748821462512	-0.05022015073660768	
TTIFS(ph)PEGR	ddPTM_K562_Methotrexat_30min_R1	1	TTIFSPEGR	9	0	H0YLS6;H0YLC2;H0YMI6;H0YMA1;H0YMZ1;H0YL69;P25789	H0YLS6	PSMA4	Proteasome subunit alpha type;Proteasome subunit alpha type-4	1	T(0.016)T(0.051)IFS(0.933)PEGR	84.68700000000001	0.022553999999999998	25358000.0	2263.5	2050.4	2554.3	1923.3	1825.9	1960.4	2081.1	2208.7	1960.9	2543.7	True	False	2163.999250238372	2389.1937491590875	2018.1873365748281	1754.6872751158885	2066.037854245764	2339.219554896107	2547.839650765667	2131.0187690969233	1869.7381870027186	2083.0112810430364	1.0388802355188311	1.1469903072069465	0.9688796959199623	0.8423801114688421	0.9918514954999315	1.1229989852598294	1.2231521134584902	1.023047157012922	0.8976130873695871	1.0	11.024454937319943	-8.224097216338563	23.750954248802817	1.0654145953560452	0.9958441708838127	0.058901602927275754	0.10555567457352086	909.0979514159277	578218.2681500089	0.03838320548899386	0.038381927123744844	5.969016558535705e-09	8.224097216338563	-0.0695704244722325	
TTIPEEEEEEEEAAGVVVEEELFHQQGT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	9	TTIPEEEEEEEEAAGVVVEEELFHQQGTPR	30	0	P20700	P20700	LMNB1	Lamin-B1	1	TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR	163.31	1.7914e-35	1500344700.0	18632.27	16059.77	19735.98	19744.9	14744.789999999999	15123.069999999996	14967.849999999999	18556.6	17559.230000000003	20733.17	True	False	17813.217720450164	18713.374023084587	15593.667506124608	18013.89527293491	16683.988330633878	18045.389244063786	18324.771378940404	17903.953860019003	16742.90522992694	16978.192004474997	1.0491822519002658	1.1022006358599457	0.9184527717683093	1.0610019764287582	0.9826716723568932	1.0628569425594612	1.0793122950965854	1.0545265276361582	0.9861418239064534	1.0	14.051395215056683	-8.356399686384473	18.863418757392957	1.0426450964688658	1.0233578030834625	0.01041344297643132	0.05278879059625227	31.613995195582948	6264.940203293822	0.01857287174515904	0.016379742952481454	4.40149602130365e-09	8.356399686384473	-0.01928729338540336	
TTIPEEEEEEEEAAGVVVEEELFHQQGTPR	ddPTM_K562_Methotrexat_30min_R1	2	TTIPEEEEEEEEAAGVVVEEELFHQQGTPR	30	0	P20700	P20700	LMNB1	Lamin-B1	0	;	127.14	6.1848e-16	11640400.0	1453.17	1567.71	2193.4	1794.0900000000001	1671.52	1602.8899999999999	1401.8899999999999	1719.6799999999998	1850.01	1832.27	False	True	1389.2903867766286	1826.7474309862437	1733.0353145845158	1636.8049152044207	1891.3541782840673	1912.625807155386	1716.2995185295665	1659.197879676096	1764.0034388989225	1500.4281479406861	0.9259293013686845	1.2174841117806445	1.1550271947131086	1.0908919013888865	1.2605429862669004	1.2747200256009823	1.1438731810551277	1.1058162844740809	1.175666719742621	1.0	10.551158517899092	-6.253683447966815	24.5638662814014	1.1657168378784541	0.9259291522507829	0.4411073331686206	0.07803389122514687	699.774004656403	2216193.5985171306	0.01925060480763271	0.20200032098122458	5.575920229802185e-07	6.253683447966815	-0.23978768562767128	
TTKS(ph)PSDSGYSYETIGK	ddPTM_K562_Methotrexat_30min_R1	2	TTKSPSDSGYSYETIGK	17	1	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	T(0.039)T(0.009)KS(0.851)PS(0.091)DS(0.01)GYSYETIGK;T(0.187)T(0.187)KS(0.305)PS(0.305)DS(0.014)GYSYETIGK	101.48	0.0010404000000000001	55735000.0	4498.0	2799.34	8399.4	4794.3	2868.76	2457.35	2488.58	3345.0	3787.4	6765.1	True	False	4300.273305753126	3261.883354355739	6636.480724592499	4373.991162630949	3246.0522234219166	2932.198109173613	3046.707413436366	3227.35445403595	3611.3246006701497	5539.874834840686	0.7762401559523305	0.5888009118620354	1.1979477736311255	0.789546928952725	0.5859432424370407	0.5292895952689761	0.5499596117723448	0.5825681175572555	0.6518783742113197	1.0	12.435637665775083	-7.6601693449606865	5.252635333062197	0.618659191649975	0.8524699360869092	0.18536959904782035	0.18901399401406882	0.3003866517029322	12.943846683629541	0.05573593083944878	0.0721135815701025	2.1869087137724252e-08	7.6601693449606865	0.23381074443693428	
TTNNEK	ddPTM_K562_Methotrexat_30min_R1	1	TTNNEK	6	0	O75717-2;O75717	O75717-2	WDHD1	WD repeat and HMG-box DNA-binding protein 1	0		88.734	0.033335000000000004	8964200.0	720.75	810.56	850.73	575.28	781.08	548.15	448.19	843.37	812.82	731.23	False	True	689.0666930016818	944.4912628357347	672.173398913324	524.8460955798198	883.8057107148705	654.0722296553258	548.7080164704552	813.708199073333	775.0321756130089	598.7971612364273	1.1507514357263506	1.5773141958213368	1.1225393880047556	0.8765006408782742	1.4759684379430638	1.0923101711183194	0.9163503970818007	1.3589045702774314	1.2943150465387685	1.0	9.22592357169237	-6.8077019779709955	24.999612726234346	1.1475248235804192	1.3640346255238462	0.15840238132316764	0.20430718805755693	198.08191459501106	107039.68930480804	0.05301258963762616	0.11035512232152923	1.5570337344588019e-07	6.8077019779709955	0.21650980194342706	
TTPESPPY(ph)SSGSYDSIKTEVSGCPEDLTVGR	ddPTM_K562_Methotrexat_30min_R1	1	TTPESPPYSSGSYDSIKTEVSGCPEDLTVGR	31	1	A0A087X0N3;A0A087WTU5;Q96MY1-2;Q96MY1	A0A087X0N3	NOL4L	Nucleolar protein 4-like	1	T(0.006)T(0.006)PES(0.048)PPY(0.456)S(0.146)S(0.146)GS(0.048)Y(0.127)DS(0.015)IKT(0.002)EVS(0.001)GCPEDLTVGR	63.297	0.0010037000000000002	19536000.0	856.38	593.48	1238.9	746.77	838.4	679.83	409.95	774.47	757.16	884.58	True	False	818.7345606004588	691.5424825648342	978.871820570237	681.3018335352216	948.6642954157672	811.19752601766	501.8917230461702	747.231451126225	721.9597968641842	724.3739902445454	1.1302649896692973	0.954676026304275	1.3513348543060943	0.9405387861941552	1.3096332946679965	1.1198600956721312	0.6928627060128619	1.0315547785943597	0.9966672003510973	1.0	9.500590934821942	-8.564968623558759	24.9995900476958	0.9291091228747073	1.1367696603506254	0.3095995485931211	0.14950722690316764	174.2550007596957	103498.60967554041	0.05468517015360194	0.04235899216942698	2.722898021983394e-09	8.564968623558759	0.20766053747591817	
TTPESPPYS(ph)SGSYDSIKTEVSGCPEDLTVGR	ddPTM_K562_Methotrexat_30min_R1	1	TTPESPPYSSGSYDSIKTEVSGCPEDLTVGR	31	1	A0A087X0N3;A0A087WTU5;Q96MY1-2;Q96MY1	A0A087X0N3	NOL4L	Nucleolar protein 4-like	1	T(0.102)T(0.102)PES(0.222)PPY(0.194)S(0.229)S(0.049)GS(0.058)Y(0.042)DS(0.001)IKTEVSGCPEDLTVGR	92.545	3.9747e-07	16292000.0	2603.4	1966.9	3871.2	2922.8	1823.5	1818.9	1676.3	2386.6	2370.4	3127.6	True	False	2488.9576532231426	2291.896793416412	3058.6880230781353	2666.5626619397476	2063.3222121787353	2170.3766825140433	2052.2529463161254	2302.661925262242	2260.200621383673	2561.161332936352	0.971808226688153	0.8948662327291852	1.1942582389260783	1.0411537249324914	0.8056197732038817	0.8474189636565076	0.801297801869917	0.8990694555825804	0.8824905297130853	1.0	11.322582418853312	-7.751917470920839	24.997543084570122	0.8627737884873778	1.0282417342899872	0.4202697080956428	0.08747616357972456	189.5784761093548	497691.55017312936	0.02654788705333963	0.0338177013266366	1.7704453644879773e-08	7.751917470920839	0.16546794580260937	
TTPSYVAFTDTER	ddPTM_K562_Methotrexat_30min_R1	4	TTPSYVAFTDTER	13	0	A0A0G2JIW1;P0DMV8-2;P0DMV9;P0DMV8;Q53FA3;P34931;E9PKE3;P11142-2;P11142;E9PNE6;P54652;E9PQQ4;E9PQK7;E9PK54;E9PLF4;E9PN25;E9PPY6;E9PI65;P17066;P48741	A0A0G2JIW1;E9PKE3;P17066	HSPA1A;HSPA1B;HSPA1L;HSPA8;HSPA2;HSPA6;HSPA7	Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like;Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7	0	;;;	227.81	9.6546e-34	214080000.0	3693.99	3110.05	4221.96	4755.63	3948.89	3428.65	3228.1	3943.9799999999996	4159.94	4824.23	False	True	3531.606622658735	3623.9329006887574	3335.8282924971486	4338.711301491898	4468.238250863987	4091.188087581377	3952.08359840308	3805.267987930857	3966.5452973839	3950.5151992555134	0.8939610264818819	0.9173317195113434	0.8444033560801881	1.0982646775563707	1.131052033847646	1.0356087449941653	1.0003970112930745	0.9632333495762708	1.0040577234410863	1.0	11.947825096671432	-7.2567196900240445	24.9998928944379	1.034505490668144	0.8884419986220169	0.6517709873275659	0.04955095829927255	280.7042716588417	1486867.6712750806	0.015502081733505441	0.02573902610028469	5.537073774514924e-08	7.2567196900240445	-0.146063492046127	
TTRTPDT(ph)STYCYETAEK	ddPTM_K562_Methotrexat_30min_R1	1	TTRTPDTSTYCYETAEK	17	1	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	T(0.001)TRT(0.022)PDT(0.614)S(0.356)T(0.007)YCYETAEK	145.8	1.7295e-08	22794000.0	3394.0	2224.0	5562.9	3987.0	2782.9	2201.3	2049.9	3243.9	3313.9	4617.1	True	False	3244.8038238608506	2591.478198463622	4395.32331152649	3637.465900216837	3148.900128473923	2626.6700704921445	2509.642256549201	3129.810198339976	3159.837512320009	3780.898449386249	0.8582097264176926	0.6854133304966958	1.1625076341947191	0.962063898015379	0.8328444073881651	0.6947211372256058	0.6637687550049354	0.8277953614035934	0.83573720760285	1.0	11.884513385366674	-7.954579694076919	6.033302154297084	0.7825386612537865	0.9167699719774255	0.11918716198549895	0.1390799824190583	0.36563246823852047	31.999441828313458	0.04519784831024289	0.051000628581843926	1.110248783330584e-08	7.954579694076919	0.13423131072363903	
TTS(ph)PPEVSGYSYEKTER	ddPTM_K562_Methotrexat_30min_R1	2	TTSPPEVSGYSYEKTER	17	1	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	T(0.025)T(0.025)S(0.949)PPEVS(0.001)GYSYEKTER;T(0.153)T(0.153)S(0.694)PPEVSGYSYEKTER	97.073	0.0015997	45796000.0	3238.1	2414.17	4286.7	3427.9	2077.06	1789.37	2152.32	2562.9	2946.8	3780.4	True	False	3095.7570011914636	2813.0705586263157	3386.980251221593	3127.3813291580896	2350.2297965604394	2135.1404279455446	2635.0325487174873	2472.761354334452	2809.8039111936396	3095.7329271750164	1.0000077765159379	0.908692908852883	1.0940802488127914	1.0102232339570565	0.7591836414341856	0.689704337607039	0.8511821305987345	0.798764432366893	0.9076376991466448	1.0	11.596065298373079	-7.751493500581825	24.98155705177388	0.8179533814696835	1.0029847391854636	0.4555976397782564	0.08933584455367037	171.84040128036384	431618.08772249613	0.026446975045828047	0.03372801438968715	1.7721745663502824e-08	7.751493500581825	0.18503135771578005	
TTS(ph)PSSDTDLLDR	ddPTM_K562_Methotrexat_30min_R1	2	TTSPSSDTDLLDR	13	0	K7ENU0;K7ERZ4;K7EJ43;C9J9G2;Q96QT6-2;Q96QT6-5;Q96QT6-3;Q96QT6	K7ENU0	PHF12	PHD finger protein 12	1	T(0.179)T(0.179)S(0.616)PS(0.014)S(0.004)DT(0.007)DLLDR;T(0.185)T(0.185)S(0.629)PS(0.001)SDTDLLDR	240.18	1.4659e-58	34832000.0	4602.5	3919.0	5252.3	4753.7	3885.2	4193.3	4270.9	4094.8999999999996	4500.799999999999	5030.4	True	False	4400.179610877895	4566.5481383898095	4149.9140069263485	4336.950501595381	4396.171899510181	5003.5958781605	5228.75804356114	3950.8800459885856	4291.558790382905	4119.345814427366	1.0681743677520232	1.1085614910979764	1.0074206424699577	1.0528250593591555	1.0672014677945403	1.2146578858798855	1.2693175759238835	0.9591037567545906	1.0418059040715613	1.0	12.008199528571														
TTS(ph)QAHSLPLS(ph)PASTR	ddPTM_K562_Methotrexat_30min_R1	1	TTSQAHSLPLSPASTR	16	0	P19838-3;P19838;P19838-2	P19838-3	NFKB1	Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit	2	T(0.065)T(0.089)S(0.521)QAHS(0.417)LPLS(0.906)PAS(0.002)T(0.001)R	113.14	0.0018036999999999999	9912500.0	2469.5	2190.8	2743.8	2881.3	2498.7	1891.1	2439.7	2468.4	2578.4	2978.5	True	False	2360.943736895809	2552.7924627671327	2167.913876245552	2628.7009025068405	2827.3228470364693	2256.528310683547	2986.8648291639015	2381.584972897562	2458.5307467835228	2439.064787744893	0.967970899649077	1.0466275744677491	0.8888299675917829	1.0777495192890227	1.1591831677626536	0.9251612839566614	1.2245942970319754	0.9764336662412008	1.0079809110182054	1.0	11.252112364943322	-7.301292537359511	24.94648682278279	1.0582783825095439	0.9756911738707058	0.15473839055613026	0.09011285368317407	920.9709567126681	576488.568621506	0.02451768682057841	0.036365999842492086	4.996978290468809e-08	7.301292537359511	-0.08258720863883806	
TTS(ph)SSDLTTSSSSSGPR	ddPTM_K562_Methotrexat_30min_R1	1	TTSSSDLTTSSSSSGPR	17	0	Q5QP82;A0A0A0MQT4	Q5QP82	DCAF10	DDB1- and CUL4-associated factor 10	1	T(0.007)T(0.127)S(0.807)S(0.057)S(0.003)DLTTSSSSSGPR	113.67	0.00079341	5821400.0	1483.2	1092.6	1627.3	1541.6	1154.2	1076.1	987.13	1403.9	1339.3	1247.5	True	False	1418.000303933535	1273.1335789754291	1285.7519683702847	1406.450321488406	1305.9975307357804	1284.0410951967463	1208.5190305416904	1354.5240412619057	1277.0362353270127	1021.5656614778429	1.388065747905222	1.246257217704104	1.2586092278300134	1.3767595902291503	1.2784273982413088	1.256934471876428	1.1830067083435365	1.3259294946370752	1.2500774874124043	1.0	9.996566221424379	-15.146906390971317	0.23731402483903838	6.728883996036345e-17	1.3145342938254188	0.7081113296593192	0.0562546114585854	60.41845068672848	0.8740682368369932	29.126846155231867	0.0938850311607275	7.130066969921356e-16	15.146906390971317	1.3145342938254188	
TTSIS(ph)PALAR	ddPTM_K562_Methotrexat_30min_R1	5	TTSISPALAR	10	0	Q9UKE5-8;Q9UKE5-5;Q9UKE5-7;Q9UKE5-3;Q9UKE5-6;Q9UKE5-2;Q9UKE5-4;Q9UKE5	Q9UKE5-8	TNIK	TRAF2 and NCK-interacting protein kinase	1	T(0.002)TS(0.004)IS(0.994)PALAR;T(0.003)TS(0.046)IS(0.95)PALAR;T(0.006)TS(0.002)IS(0.992)PALAR;TTS(0.002)IS(0.997)PALAR;T(0.136)TS(0.005)IS(0.859)PALAR	175.33	3.88e-07	1277163600.0	11966.6	10314.3	14552.6	13200.6	9926.1	9576.9	9238.800000000001	11092.4	11512.8	12582.1	True	False	11440.562592402259	12018.562761876505	11498.208133045793	12043.32389325368	11231.556133977148	11427.500385270618	11310.836079714507	10702.274004767825	10977.572440881677	10303.35976695821	1.110372038943155	1.166470261517876	1.1159668683917392	1.1688734709502575	1.0900867666482505	1.1091042770259667	1.0977813388587252	1.0387169085455883	1.0654361964614296	1.0	13.330827234313068	-9.301578033328921	0.5398598249087667	1.0019773879664324	1.1433843321722599	0.7645839618449453	0.02402699941545094	0.36086224225974955	0.23626520928879616	0.022602493106508678	0.01391721901253722	4.993694462537743e-10	9.301578033328921	0.14140694420582745	
TTSPSPEPDRLSGS(ph)SSDSR	ddPTM_K562_Methotrexat_30min_R1	1	TTSPSPEPDRLSGSSSDSR	19	1	Q9NQ75-2;Q9NQ75	Q9NQ75-2	CASS4	Cas scaffolding protein family member 4	1	T(0.008)T(0.008)S(0.011)PS(0.038)PEPDRLS(0.026)GS(0.302)S(0.302)S(0.302)DS(0.003)R	64.58800000000001	0.020766	16115000.0	747.58	623.87	903.1	991.45	748.86	995.42	707.9	783.63	928.31	829.59	True	False	714.7172783270173	726.9539135231566	713.5516515917192	904.5311178254287	847.3482159649943	1187.770827042789	866.6645950588708	756.0692887342875	885.1530707208393	679.3432121085399	1.0520709791280372	1.0700834284732794	1.050355164920252	1.3314788485454245	1.2473050453172292	1.7484105322200771	1.2757389484601227	1.1129415518668477	1.3029541694742315	1.0	9.407996814772002	-7.259576208088322	24.189611204271436	1.310036811979499	1.0587611922741758	0.2460596542611958	0.1824845329867646	143.02062213080535	1856815.8693009946	0.05176947149718578	0.08410697243308106	5.5007738687733e-08	7.259576208088322	-0.2512756197053232	
TTSQAHSLPLS(ph)PASTR	ddPTM_K562_Methotrexat_30min_R1	2	TTSQAHSLPLSPASTR	16	0	P19838-3;P19838;P19838-2	P19838-3	NFKB1	Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit	1	TTSQAHS(0.003)LPLS(0.874)PAS(0.051)T(0.072)R;TTSQAHS(0.001)LPLS(0.974)PAS(0.024)T(0.002)R	102.61	0.0011621	63930000.0	5530.2	5127.8	6624.0	6132.5	5750.4	5045.9	4278.6	5483.299999999999	5683.7	5924.5	True	False	5287.099029674507	5975.081792302955	5233.712922315961	5594.873246320483	6506.678392603564	6020.948761502887	5238.184964569695	5290.449231035974	5419.466027572724	4851.515640421222	1.0897829506359102	1.231590751253186	1.078778944606588	1.1532217271868304	1.341164055700877	1.2410449038519704	1.0797007271144037	1.0904734980049744	1.1170665889272884	1.0	12.244219808318517	-8.778252408448688	24.76722143602015	1.0793495996178437	1.191432061258759	0.35837403421873526	0.0766941460357791	280.426954147134	413091.76020995586	0.03383422220746416	0.02288136688819496	1.6662785034538764e-09	8.778252408448688	0.11208246164091529	
TTSSANNPNLMY(ph)QDECDRR	ddPTM_K562_Methotrexat_30min_R1	1	TTSSANNPNLMYQDECDRR	19	1	A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2	A0A1X7SBZ2	DDX17	Probable ATP-dependent RNA helicase DDX17	1	T(0.08)T(0.028)S(0.08)S(0.278)ANNPNLMY(0.534)QDECDRR	52.365	0.031875	25343000.0	1137.3	767.02	925.79	1065.8	851.84	765.24	674.09	874.93	991.39	1096.7	True	False	1087.3056537645691	893.7570178891941	731.479330668915	972.3629687612504	963.8718909911345	913.1117997289819	825.2718419031422	844.1582159849554	945.3004952892161	898.077002759719	1.2107042607965304	0.9951897389007291	0.8144951139168884	1.0827166999859217	1.0732619675475856	1.0167411000649857	0.918932162127688	0.9399619558132817	1.0525828992217627	1.0	9.810695339347886	-8.55179314017196	24.309772843223264	0.9721475444698877	1.0255754186429522	0.06557621366371025	0.09818523329557315	523.4684680032854	440099.89478249766	0.03910249058232672	0.03028921653961579	2.8067702189482427e-09	8.55179314017196	0.053427874173064493	
TTTAAGSSHSRPGVPVEGS(ph)PGRNPGV	ddPTM_K562_Methotrexat_30min_R1	2	TTTAAGSSHSRPGVPVEGSPGRNPGV	26	2	Q8NE01-2;Q8NE01	Q8NE01-2	CNNM3	Metal transporter CNNM3	1	TTTAAGSSHSRPGVPVEGS(1)PGRNPGV;TTT(0.001)AAGS(0.002)S(0.002)HS(0.008)RPGVPVEGS(0.988)PGRNPGV	87.671	0.0004466	159616000.0	1789.23	1497.13	1996.9499999999998	1621.67	1786.6399999999999	1603.35	1406.26	1580.4499999999998	1628.78	2006.1599999999999	True	False	1710.577591563509	1744.505285641117	1577.8174849364223	1479.5007089051023	2021.614476099267	1913.1746956451095	1721.6496022707843	1524.864677692413	1553.0583733113813	1642.8249839121345	1.0412415250041012	1.0618935691413984	0.9604294434207429	0.9005832778254318	1.2305720304332746	1.1645639154386238	1.0479811417105072	0.9281966689240279	0.9453583848067687	1.0	10.681963077615226	-9.212269649295859	6.910834448694363	0.9526972780790108	1.0595506317036067	0.2112237946041715	0.0887169098515638	0.39365998239270933	46.397010360828034	0.04700591261979494	0.02671441894242985	6.133810444775045e-10	9.212269649295859	0.10685335362459591	
TTWGDGGENS(ph)PCNVVSK	ddPTM_K562_Methotrexat_30min_R1	2	TTWGDGGENSPCNVVSK	17	0	H3BM38;O00161;H3BV99;H3BP15;H3BQY9	H3BM38	SNAP23	Synaptosomal-associated protein;Synaptosomal-associated protein 23	1	TTWGDGGENS(1)PCNVVSK;TTWGDGGENS(1)PCNVVSK	217.33	2.3812e-30	133543000.0	4816.3	3688.6	7400.3	6099.3	3782.0	3437.1	3428.2	4535.1	5239.7	6001.799999999999	True	False	4604.581218874789	4298.0784545202005	5847.0781610831555	5564.583838774157	4279.399290627899	4101.270930490413	4197.061117079843	4375.597962480852	4996.107490661503	4914.815861368909	0.9368776671914394	0.874514646276711	1.1896840748484494	1.132205965743805	0.8707140636263777	0.8344709234636714	0.8539610100287354	0.8902872632266084	1.0165401169821144	1.0	12.26292165018697	-7.781861321241329	24.992230745652776	0.8988319410941179	1.033146154901216	0.2596654331810262	0.09992904373943652	330.68874299018046	404692.5214008771	0.03346744775190223	0.03799150558346094	1.6524893863098714e-08	7.781861321241329	0.13431421380709807	
TVAISDAAQLPHDY(ph)CTTPGGTLFS(ph)TTPGGTR	ddPTM_K562_Methotrexat_30min_R1	1	TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR	31	0	Q13542	Q13542	EIF4EBP2	Eukaryotic translation initiation factor 4E-binding protein 2	2	TVAISDAAQLPHDY(0.777)CT(0.191)T(0.191)PGGT(0.049)LFS(0.256)T(0.256)T(0.257)PGGT(0.023)R	90.757	1.3621e-06	475050000.0	4506.2	3343.3	4242.2	4324.3	3351.1	3066.6	3309.7	3962.3	4396.1	4322.0	True	False	4308.112843571527	3895.723498616651	3351.820193093113	3945.195332908874	3791.8283878432444	3659.1770490942654	4051.9844755846098	3822.9436631469785	4191.726270530188	3539.2439189637175	1.217241010287003	1.1007219586485324	0.9470441342382863	1.1147000385506118	1.071366787557689	1.0338866528774495	1.1448729074234085	1.0801582910584833	1.184356423718181	1.0	11.789225478059263	-8.76913181284919	24.9889902889859	1.1090267476989595	1.0767597566203944	0.013678011356547004	0.07753818234775273	744.7158707060139	2419197.4192835432	0.031928228798865754	0.021961779056263918	1.7016419641448939e-09	8.76913181284919	-0.03226699107856512	
TVAISDAAQLPHDYCT(ph)T(ph)PGGTLFSTTPGGTR	ddPTM_K562_Methotrexat_30min_R1	1	TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR	31	0	Q13542	Q13542	EIF4EBP2	Eukaryotic translation initiation factor 4E-binding protein 2	2	TVAISDAAQLPHDY(0.113)CT(0.375)T(0.801)PGGT(0.062)LFS(0.313)T(0.313)T(0.021)PGGT(0.002)R	106.67	4.6526999999999996e-14	24122000.0	1192.7	1235.9	1269.7	1383.3	1086.3	1049.8	1099.4	1645.2	1209.9	1652.7	True	False	1140.2703360986552	1440.111468291903	1003.2073214771408	1262.028236711802	1229.167490589393	1252.6589924147788	1345.9684359481894	1587.337383491764	1153.6520130830688	1353.3800150095637	0.8425352254744188	1.0640850702097344	0.7412606292032852	0.9325010142867255	0.9082205123153877	0.9255781661634237	0.9945236526480539	1.1728689399041754	0.8524228230715498	1.0	10.40235127459864	-8.754141474513032	3.576094192653443	1.0219782405027724	0.9020904169805855	0.18728718678487377	0.10436578209915665	0.35313543365714095	9.598363230240297	0.04268243550668356	0.029872176073691737	1.761402163674382e-09	8.754141474513032	-0.11988782352218696	
TVAISDAAQLPHDYCT(ph)TPGGT(ph)LFSTTPGGTR	ddPTM_K562_Methotrexat_30min_R1	1	TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR	31	0	Q13542	Q13542	EIF4EBP2	Eukaryotic translation initiation factor 4E-binding protein 2	2	TVAISDAAQLPHDY(0.049)CT(0.505)T(0.505)PGGT(0.329)LFS(0.189)T(0.189)T(0.201)PGGT(0.032)R	90.964	6.0503e-07	465120000.0	2165.4	2386.6	2470.4	2073.2	2044.0	1711.7	1875.3	2404.1	2367.8	2542.2	True	False	2070.2116087767495	2780.945084736188	1951.89680001349	1891.4457748506522	2312.8218270871034	2042.4617996917295	2295.8837619916662	2319.5464403431474	2257.7214948161736	2081.782945578334	0.9944416218673701	1.3358477600380294	0.9376082190313262	0.908570117200761	1.1109812538331585	0.9811117936333749	1.102844927646313	1.114211472079651	1.0845133973316141	1.0	11.02360394039744	-6.783851240589065	24.999866908019417	1.033472991775949	1.16514506793931	0.2142015596383945	0.103380814971201	313.13095418288844	349289.40823978453	0.026704377755654977	0.05565588945388041	1.644935068314048e-07	6.783851240589065	0.13167207616336096	
TVAISDAAQLPHDYCT(ph)TPGGTLFS(ph)TTPGGTR	ddPTM_K562_Methotrexat_30min_R1	1	TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR	31	0	Q13542	Q13542	EIF4EBP2	Eukaryotic translation initiation factor 4E-binding protein 2	2	TVAISDAAQLPHDY(0.105)CT(0.44)T(0.44)PGGT(0.16)LFS(0.37)T(0.37)T(0.108)PGGT(0.007)R	66.437	0.00014239	23196000.0	848.09	739.75	963.86	729.93	850.67	723.76	720.64	858.33	689.6	898.09	True	False	810.8089790742931	861.9811138999395	761.5589579262474	665.9381701894351	962.5480154834571	863.6163767861696	882.2618643639278	828.1420473939244	657.5406465179633	735.4371983299683	1.102485679151774	1.1720662428516362	1.0355186814803445	0.9054997105145733	1.3088106199539706	1.1742897677018116	1.199642697387852	1.126054065900488	0.8940813002267324	1.0	9.52245833951276	-9.750362304847695	24.883772715916333	0.9470406678873039	1.1289643659640334	0.3303667152219283	0.10307269246652163	214.11843458730084	481007.95902310853	0.0746050301417572	0.027600038826319482	1.7767965208673346e-10	9.750362304847695	0.18192369807672948	
TVAISDAAQLPHDYCT(ph)TPGGTLFSTT(ph)PGGTRIIYDRK	ddPTM_K562_Methotrexat_30min_R1	1	TVAISDAAQLPHDYCTTPGGTLFSTTPGGTRIIYDRK	37	2	Q13542	Q13542	EIF4EBP2	Eukaryotic translation initiation factor 4E-binding protein 2	2	TVAISDAAQLPHDY(0.247)CT(0.278)T(0.278)PGGT(0.179)LFS(0.175)T(0.251)T(0.515)PGGT(0.04)RIIY(0.036)DRK	70.833	3.4425e-06	37924000.0	3175.8	2423.2	3559.9	3958.6	2681.0	2008.9	2559.9	2604.0	2802.0	4188.2	True	False	3036.1956345955477	2823.5926126425607	2812.725638911927	3611.5556841229945	3033.5984923779465	2397.091493486425	3134.022738933754	2512.415844038748	2671.7356315883594	3429.676395512224	0.8852717529176948	0.8232825161981078	0.8201140033480753	1.0530310348955259	0.8845144971541482	0.6989264341740958	0.9137954656697825	0.7325518662128814	0.7790051665178557	1.0	11.743856743096833	-8.033354291119197	24.85101979488263	0.8112569377918483	0.8953775219586307	0.0964079506498079	0.1009009138289992	1208.5322349377811	900428.5025607002	0.03267384263775529	0.03269516629285795	9.26074037416651e-09	8.033354291119197	0.08412058416678247	
TVAISDAAQLPHDYCT(ph)TPGGTLFSTTPGGTR	ddPTM_K562_Methotrexat_30min_R1	1	TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR	31	0	Q13542	Q13542	EIF4EBP2	Eukaryotic translation initiation factor 4E-binding protein 2	1	TVAISDAAQLPHDY(0.005)CT(0.607)T(0.025)PGGT(0.182)LFS(0.057)T(0.057)T(0.057)PGGT(0.011)R	66.633	0.00022375	86855000.0	1392.7	1409.1	2346.3	1621.9	1438.5	1520.0	1335.2	2227.8	1837.0	1638.5	True	False	1331.4785755718935	1641.9298243952746	1853.8436940866472	1479.7105451621994	1627.6879639260267	1813.7184877790653	1634.65258839187	2149.4470112709396	1751.5982709592508	1341.7517726103772	0.9923434444073831	1.2237210025822445	1.38165920994462	1.1028198921499641	1.213106624602672	1.3517541208464194	1.218297319787888	1.6019706887282077	1.3054562749349066	1.0	10.389902078742516	-8.187640087351728	5.133709882965579	1.3282315959910431	1.1898100237141014	0.08628220304543299	0.1675030549552509	0.46909258236353274	22.8752861306471	0.055250943839551744	0.05497227284705094	6.491721988373886e-09	8.187640087351728	-0.13842157227694174	
TVAISDAAQLPHDYCT(ph)TPGGTLFSTTPGGTRIIY(ph)DRK	ddPTM_K562_Methotrexat_30min_R1	1	TVAISDAAQLPHDYCTTPGGTLFSTTPGGTRIIYDRK	37	2	Q13542	Q13542	EIF4EBP2	Eukaryotic translation initiation factor 4E-binding protein 2	2	TVAISDAAQLPHDY(0.272)CT(0.339)T(0.339)PGGT(0.076)LFS(0.076)T(0.216)T(0.216)PGGT(0.228)RIIY(0.238)DRK	55.765	0.00070947	81309000.0	1727.7	1283.1	1886.2	2192.1	1325.7	1063.8	1089.8	1154.4	1268.4	2175.6	True	False	1651.7523766895688	1495.1104660290814	1490.312396448124	1999.9219964548106	1500.0527867756225	1269.3642942759016	1334.2153915738907	1113.7990976798515	1209.432360851776	1781.5777580049642	0.9271289839963114	0.8392058439836648	0.8365126864386749	1.1225566706077155	0.8419799697406432	0.7124944665324928	0.7488954021675506	0.6251756863686373	0.6788546586965226	1.0	10.798939736777706	-8.00423894138967	24.99224424621378	0.7347114364080143	0.9260292306042988	0.32925569374772357	0.11847641834407267	198.85501633808911	1172433.925716681	0.036828509950781574	0.040780717785745456	9.902869560533091e-09	8.00423894138967	0.19131779419628447	
TVAISDAAQLPHDYCTT(ph)PGGTLFS(ph)TTPGGTRIIYDR	ddPTM_K562_Methotrexat_30min_R1	1	TVAISDAAQLPHDYCTTPGGTLFSTTPGGTRIIYDR	36	1	Q13542	Q13542	EIF4EBP2	Eukaryotic translation initiation factor 4E-binding protein 2	2	TVAISDAAQLPHDY(0.135)CT(0.148)T(0.675)PGGT(0.12)LFS(0.255)T(0.255)T(0.255)PGGT(0.027)RIIY(0.131)DR	78.383	1.2163999999999999e-08	140290000.0	1805.5	1443.7	1588.1	1921.2	1642.6	1731.8	1639.5	1521.4	1892.1	1972.2	True	False	1726.132381844658	1682.2468862958324	1254.7795126705896	1752.771378855428	1858.6306913763578	2066.4458402209116	2007.1996095479863	1467.891499662271	1804.136683985844	1615.0154689912624	1.0688023830030553	1.0416289618244725	0.7769458167817576	1.0852969600038618	1.150843894106635	1.279520772337625	1.242836151161872	0.9089024395407896	1.1171017978624729	1.0	10.657332268113858	-7.5031111060108	24.19019153374349	1.125682542112649	0.9638335844875303	0.2364140724400613	0.12364676032239227	734.4818912357725	898805.162015692	0.03688022292505306	0.05379764848195375	3.139705357021348e-08	7.5031111060108	-0.16184895762511875	
TVAISDAAQLPHDYCTTPGGT(ph)LFS(ph)TTPGGTRIIYDR	ddPTM_K562_Methotrexat_30min_R1	2	TVAISDAAQLPHDYCTTPGGTLFSTTPGGTRIIYDR	36	1	Q13542	Q13542	EIF4EBP2	Eukaryotic translation initiation factor 4E-binding protein 2	2	TVAISDAAQLPHDY(0.088)CT(0.294)T(0.294)PGGT(0.422)LFS(0.475)T(0.19)T(0.19)PGGT(0.022)RIIY(0.024)DR;TVAISDAAQLPHDY(0.036)CT(0.138)T(0.33)PGGT(0.476)LFS(0.339)T(0.339)T(0.339)PGGT(0.003)RIIYDR	83.741	3.3250999999999996e-09	118857000.0	2685.48	2286.51	3049.3900000000003	3021.64	2252.41	2395.8999999999996	2541.6800000000003	2571.5	2447.67	2586.06	True	False	2567.4295147029575	2664.3169134752966	2409.364711379993	2756.737512598749	2548.641395082811	2858.8737663617535	3111.716440131701	2481.0588874599257	2333.87835594928	2117.6994745662437	1.2123672624647694	1.2581185127889847	1.1377273972613557	1.301760493265172	1.203495314463746	1.349990308208071	1.4693852822384328	1.1715821424416732	1.1020819450443105	1.0	11.0482821538245	-9.762872374749135	2.6151970654418997	1.0184225198013444	1.2724950005879256	0.5113323046196359	0.08813892853839887	0.22962012326609152	2.950093733006998	0.08662943537708302	0.024649184406393385	1.7263451350476762e-10	9.762872374749135	0.2540724807865813	
TVAISDAAQLPHDYCTTPGGT(ph)LFSTTPGGTR	ddPTM_K562_Methotrexat_30min_R1	1	TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR	31	0	Q13542	Q13542	EIF4EBP2	Eukaryotic translation initiation factor 4E-binding protein 2	1	TVAISDAAQLPHDY(0.002)CT(0.042)T(0.042)PGGT(0.216)LFS(0.216)T(0.216)T(0.216)PGGT(0.05)R	74.83800000000001	1.4279000000000002e-05	72833000.0	1816.8	1777.8	2949.0	1994.4	2001.5	2081.8	1898.3	2245.0	2390.6	2273.9	True	False	1736.935647374895	2071.55123256683	2330.045200469471	1819.5540485057604	2264.732332150117	2484.0783867489886	2324.042097471754	2166.042077521887	2279.4615277926973	1862.0746754584886	0.9327959132182595	1.1124963245938368	1.251316733522385	0.9771649185109836	1.2162414117964868	1.3340380058266714	1.2480928547613257	1.1632412523888465	1.2241515111263934	1.0	10.862695215643306	-6.327000409288845	2.9293056028669424	1.1853499351413739	0.9074350453822576	0.32197471772822017	0.10564595297830713	0.3841976104474449	5.07363232156594	0.027402897869911128	0.23132662552071287	4.7097688253758245e-07	6.327000409288845	-0.27791488975911627	
TVAISDAAQLPHDYCTTPGGTLFSTT(ph)PGGTR	ddPTM_K562_Methotrexat_30min_R1	1	TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR	31	0	Q13542	Q13542	EIF4EBP2	Eukaryotic translation initiation factor 4E-binding protein 2	1	TVAISDAAQLPHDY(0.01)CT(0.002)T(0.002)PGGT(0.108)LFS(0.246)T(0.181)T(0.415)PGGT(0.036)R	72.811	7.6558e-06	43111000.0	1392.6	1342.0	1933.9	2023.4	1542.2	1181.1	1413.6	1932.4	1851.7	2034.6	True	False	1331.3829714521576	1563.7426899002614	1528.0008183071934	1846.0116635311638	1745.0263315722755	1409.330859155168	1730.6357841152985	1864.4363967052536	1765.614871167796	1666.1142243228999	0.7990946551057895	0.9385567130223369	0.9171044793931611	1.107974253254679	1.0473629635335746	0.8458788950847068	1.0387257721292307	1.1190327586711235	1.059720183281751	1.0	10.70227159605898	-6.147011152028007	0.9757022298055029	1.0289191107890086	0.6442609501570359	0.4616007759851979	0.07565116345833221	2.3595100495661336	1.5576227799759716	0.027003656906335924	1.0062738223355192	7.128347253696779e-07	6.147011152028007	-0.38465816063197267	
TVAISDAAQLPHDYCTTPGGTLFSTTPGGT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR	31	0	Q13542	Q13542	EIF4EBP2	Eukaryotic translation initiation factor 4E-binding protein 2	1	TVAISDAAQLPHDY(0.002)CT(0.002)T(0.008)PGGT(0.144)LFS(0.11)T(0.087)T(0.245)PGGT(0.403)R	72.959	8.1407e-06	18736000.0	963.81	802.67	1223.7	1064.8	968.35	749.61	959.45	1093.9	1087.8	1082.0	True	False	921.4420664335088	935.2975744428047	966.862092849946	971.4506372086504	1095.7049981701552	894.4615234368855	1174.6310859291332	1055.4269169715776	1037.228415432483	886.039315205632	1.039956185487842	1.055593762479649	1.091218048970611	1.0963967631427238	1.2366324827424435	1.0095054565714152	1.3257098931964717	1.191173911652706	1.170634753596417	1.0	9.791226905026571	-7.277816614142695	1.3629172210842064	1.167621844695494	1.0441957983756422	0.15983760793878887	0.09260453302591379	0.7252210632655605	2.6017116805900837	0.030428978884436866	0.07253967427883869	5.2745253732715076e-08	7.277816614142695	-0.12342604631985177	
TVANLLSGKS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	TVANLLSGKSPR	12	1	Q13428;Q13428-3;Q13428-4;E7ETY2;Q13428-6;Q13428-7;Q13428-2;Q13428-8;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857	Q13428	TCOF1	Treacle protein	1	TVANLLSGKS(1)PR;TVANLLS(0.096)GKS(0.904)PR	136.14	1.7838e-05	1146860000.0	11426.2	8379.8	16146.300000000001	12679.0	8897.099999999999	8612.3	8007.8	11919.6	11334.3	14113.6	True	False	10923.917929345575	9764.419517754252	12757.4122822449	11567.45175541743	10067.224597738092	10276.50508703924	9803.752993801992	11500.380911906399	10807.37086692075	11557.490276419787	0.9451808020667894	0.8448563904636066	1.103822021660988	1.0008619067599795	0.8710562896408215	0.8891640694698155	0.8482596791627103	0.9950586707712915	0.9350966869485955	1.0	13.496540528351566	-5.373250513404556	16.68112235379442	0.9403652382982092	0.9473872082573642	0.0	0.0787446853194991	0.0	0.0	0.01863405979762785	0.0	4.233986672081947e-06	5.373250513404556	0.00702196995915505	
TVAQQHDEDGIEEEDDDDDEIDDDDTISDWNLRK	ddPTM_K562_Methotrexat_30min_R1	1	TVAQQHDEDGIEEEDDDDDEIDDDDTISDWNLRK	34	1	Q92973-3;Q92973-2;Q92973	Q92973-3	TNPO1	Transportin-1	0		90.454	5.8548e-08	20309000.0	1392.4	1241.3	2004.4	1442.3	1047.8	1023.5	1059.7	1351.8	1635.2	1916.7	False	True	1331.1917632126838	1446.403726507597	1583.7038317466963	1315.8557983152111	1185.6040657641224	1221.2768896328123	1297.3647003586457	1304.2564277924666	1559.1799089126657	1569.5670567972581	0.8481267222370319	0.9215303801412734	1.0090067989693188	0.838355897326393	0.7553701261947852	0.7780979374814728	0.826574879193726	0.830965725321628	0.9933821573027993	1.0	10.616150951328061	-9.767327847876595	24.77072295672418	0.9966912183819221	0.8517673770263721	0.42684921922373	0.06752267996791404	149.87373213679754	630430.5927712608	0.06823150432375154	0.0194915781543743	1.7087249156968208e-10	9.767327847876595	-0.14492384135555003	
TVAS(ph)DLQK	ddPTM_K562_Methotrexat_30min_R1	1	TVASDLQK	8	0	Q7L8J4-2;Q7L8J4	Q7L8J4-2	SH3BP5L	SH3 domain-binding protein 5-like	1	T(0.002)VAS(0.998)DLQK	107.55	0.012403	19276000.0	3611.3	2579.0	4378.3	3722.8	2913.8	2257.4	2703.5	3435.7	3497.0	4120.3	True	False	3452.5515760485264	3005.1359144953617	3459.3546630096603	3396.4279040198758	3297.015772879846	2693.6106015213586	3309.8286943659505	3314.864483626703	3334.4252332849733	3374.0737434766784	1.0232590745011352	0.89065507839163	1.0252753573326194	1.0066252732580063	0.9771617408345583	0.7983259425580415	0.9809592042156942	0.9824516995325165	0.9882490682758904	1.0	11.720275790055638	-8.974169833179625	24.999907865426845	0.9875515862845098	0.951787957723737	0.0642546204971477	0.06452035015966749	720.2321298594376	697081.1236279585	0.028138466985766823	0.018970382417338102	1.0612804566423894e-09	8.974169833179625	-0.03576362856077275	
TVAT(ph)PLNQVANPNSAIFGGARPR	ddPTM_K562_Methotrexat_30min_R1	2	TVATPLNQVANPNSAIFGGARPR	23	1	Q15056-2;Q15056	Q15056-2	EIF4H	Eukaryotic translation initiation factor 4H	1	T(0.43)VAT(0.57)PLNQVANPNSAIFGGARPR;T(0.032)VAT(0.968)PLNQVANPNSAIFGGARPR	142.23	3.2538e-13	95293000.0	3153.5	2530.1	3829.3	3211.5	2289.0299999999997	2651.1000000000004	2855.8	3113.3	2905.7	3494.8	True	False	3014.8759158942844	2948.156020653244	3025.5822604807554	2929.9527811754147	2590.0775669555746	3163.3875545730825	3496.2858462623562	3003.80347436476	2770.614641222805	2861.8578546956023	1.053468085756816	1.0301545954897962	1.057209132702563	1.023793958308616	0.9050336174823975	1.1053615221953614	1.2216839632778456	1.0495991159855336	0.9681174893703788	1.0	11.482736301444168														
TVDLGIS(ph)DLEDDC	ddPTM_K562_Methotrexat_30min_R1	4	TVDLGISDLEDDC	13	0	F5H5U2;Q8NHQ9-2;Q8NHQ9	F5H5U2	DDX55	ATP-dependent RNA helicase DDX55	1	TVDLGIS(1)DLEDDC;TVDLGIS(1)DLEDDC;TVDLGIS(1)DLEDDC;TVDLGIS(1)DLEDDC	185.18	1.0355999999999999e-05	20400900.0	15073.7	12712.199999999999	16320.699999999999	18423.6	12397.099999999999	12521.400000000001	12915.5	13518.5	14748.599999999999	16200.5	True	False	14411.078196738761	14812.674979545542	12895.208105561924	16808.431592484318	14027.535945489992	14940.983337418957	15812.129647524858	13043.046692641256	14062.94080515492	13266.432463945326	1.0862813522704224	1.1165530009520266	0.9720177704599716	1.2669895722278928	1.0573706219522954	1.1262246559521272	1.191890109906945	0.9831615792782894	1.0600393770800323	1.0	13.695492840796684	-9.27810793950604	24.814536544333816	1.0162003542681808	1.1150437290623822	0.27821170973155784	0.07550229297057348	1043.5637251479743	1553546.826514489	0.039778103738803076	0.01920255319663613	5.270988400497723e-10	9.27810793950604	0.09884337479420147	
TVDSQGPT(ph)PVCT(ph)PTFLER	ddPTM_K562_Methotrexat_30min_R1	1	TVDSQGPTPVCTPTFLER	18	0	H7BZL0;C9J808;Q9BYG3	H7BZL0	NIFK	MKI67 FHA domain-interacting nucleolar phosphoprotein	2	T(0.235)VDS(0.002)QGPT(0.764)PVCT(0.896)PT(0.102)FLER	139.78	3.3893e-08	17820000.0	1806.1	1185.8	1422.6	1323.6	1157.6	1007.2	1219.3	1464.9	1494.8	1521.5	True	False	1726.7060065630776	1381.733294846297	1124.0157009792706	1207.5620430215722	1309.8446903307383	1201.8271453230766	1492.759063081341	1413.378636686775	1425.3070742677655	1245.9416063635565	1.3858643115729115	1.1089872011570963	0.9021415572274349	0.9691963386197527	1.051288987895421	0.9645934762791704	1.1980971302805703	1.1343859370840865	1.143959770657078	1.0	10.28302073971435	-12.274390689182345	17.722298004935112	0.9999868589673421	1.0854186694371792	0.040637630723747376	0.13122729960406118	0.0	0.0	0.13318801153596374	0.0323028376252213	5.316297925362936e-13	12.274390689182345	0.08543181046983717	
TVDSQGPTPVCT(ph)PTFLER	ddPTM_K562_Methotrexat_30min_R1	1	TVDSQGPTPVCTPTFLER	18	0	H7BZL0;C9J808;Q9BYG3	H7BZL0	NIFK	MKI67 FHA domain-interacting nucleolar phosphoprotein	1	TVDSQGPT(0.245)PVCT(0.753)PT(0.002)FLER	141.22	1.3846e-08	27317000.0	1254.9	1093.7	1515.5	1361.4	1251.7	1156.0	1088.0	1044.5	1313.6	1280.8	True	False	1199.7360985748328	1274.4153352786263	1197.4172605328863	1242.0481757098578	1416.3204897088692	1379.3806393898685	1332.01169575371	1007.7643429717639	1252.531022717512	1048.8347087942452	1.1438752822683242	1.2150773850187622	1.1416644114585544	1.1842172701718972	1.3503753049296878	1.3151554080200334	1.2699920059710923	0.9608419081880916	1.1942120261804063	1.0	10.03457161882865	-9.248763207610034	24.751803273492367	1.058145221323531	1.2333677349664378	0.48386233829531244	0.08500178072609049	593.7506619127246	1159375.1788283954	0.042162213206534294	0.024116415583158697	5.639450543876985e-10	9.248763207610034	0.17522251364290686	
TVFPGAVPVLPAS(ph)PPPKDSLR	ddPTM_K562_Methotrexat_30min_R1	2	TVFPGAVPVLPASPPPKDSLR	21	1	M0R165;Q9UBC2-4;Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R2S2	M0R165	EPS15L1	Epidermal growth factor receptor substrate 15-like 1	1	TVFPGAVPVLPAS(0.999)PPPKDS(0.001)LR;T(0.317)VFPGAVPVLPAS(0.683)PPPKDSLR	146.45	2.2629e-16	184538000.0	8499.5	5664.799999999999	9625.5	8430.400000000001	6345.3	5572.9	5823.299999999999	8285.5	8920.400000000001	11539.5	True	False	8125.87215701394	6600.811914863641	7605.239090240388	7691.319921040387	7179.818169968593	6649.784052989444	7129.323260921488	7994.094268733891	8505.6925510424	9449.584729958768	0.8599184397227365	0.698529311445461	0.804822572374942	0.8139320553056671	0.7598025072155654	0.7037117760219775	0.7544588957775922	0.8459730768262843	0.9001128403109746	1.0	13.206035214927747	-9.827739544663116	1.6262700599663025	0.9950630994124842	0.7684568827650623	0.7082228200788219	0.047462488096865235	0.1858296899561681	1.024092610068442	0.04472670086936244	0.013291922646650604	1.4868270557392247e-10	9.827739544663116	-0.22660621664742187	
TVFS(ph)PTLPAAR	ddPTM_K562_Methotrexat_30min_R1	2	TVFSPTLPAAR	11	0	Q7Z2W4-2;Q7Z2W4;C9J6P4;Q7Z2W4-3	Q7Z2W4-2	ZC3HAV1	Zinc finger CCCH-type antiviral protein 1	1	T(0.165)VFS(0.696)PT(0.139)LPAAR;T(0.023)VFS(0.928)PT(0.049)LPAAR	117.09	0.0025482	57234000.0	10954.8	10396.4	11135.7	11777.6	9781.7	10009.2	9373.8	10867.7	10754.099999999999	10254.5	True	False	10473.240108907148	12114.228391415112	8798.468748344483	10745.076093903645	11068.165002944192	11943.336242025154	11476.113266228052	10485.476831129004	10254.144238281364	8397.310681863353	1.2472136027463436	1.4426319151891829	1.0477722072791182	1.2795853935845238	1.3180606770747916	1.4222810962348416	1.3666415000000354	1.24867082193061	1.2211224077285159	1.0	13.035711649796976	-10.197010760700387	1.6967698854187838	1.0008578443656366	1.3015752000131402	0.42621687060201996	0.10420769360084016	0.7259660817919047	3.864630026265807	0.10241377697073697	0.029198508978026016	6.353151901801523e-11	10.197010760700387	0.30071735564750357	
TVGSTSTPRS(ph)RCT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	TVGSTSTPRSRCTPR	15	2	Q99640-4;Q99640-3;Q99640;B4DZM6	Q99640-4	PKMYT1	Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase	2	T(0.003)VGS(0.005)T(0.032)S(0.041)T(0.053)PRS(0.906)RCT(0.961)PR	89.13600000000001	0.0091539	0.0	943.91	717.27	622.21	874.65	609.31	506.79	721.61	873.23	714.63	897.09	True	False	902.4168466059208	835.7866759946057	491.6166240027499	797.9707924817295	689.4449449424869	604.71999501418	883.4494115559145	842.5180059485243	681.4070072812241	734.6183080201668	1.2284159498256715	1.137715554962267	0.6692136836715674	1.0862386408967957	0.9385077085821284	0.8231757749734426	1.2025965074799934	1.1468785854509298	0.9275660568787759	1.0	9.520851040868488	-10.920693586702543	11.797280369355304	1.0000020926681799	1.0142720714373656	0.0005991514260358377	0.16975479943109403	0.0	0.0	0.16726078118241272	0.0405666981081418	1.200345899735498e-11	10.920693586702543	0.014269978769185787	
TVHPNS(ph)PGIPYR	ddPTM_K562_Methotrexat_30min_R1	2	TVHPNSPGIPYR	12	0	J3KPH8;Q8WUI4-8;Q8WUI4-5;Q8WUI4-6;Q8WUI4-7;Q8WUI4;Q8WUI4-4;Q8WUI4-3;F8VWY3;C9J102;C9JNI4	J3KPH8	HDAC7	Histone deacetylase;Histone deacetylase 7	1	T(0.007)VHPNS(0.993)PGIPYR;T(0.003)VHPNS(0.997)PGIPYR	108.36	0.0020299	30212000.0	5148.0	4900.3	6423.9	5944.4	5353.0	4493.9	4032.5	4975.1	5455.3	5876.6	True	False	4921.700084041149	5709.991284141768	5075.611177787671	5423.263681276394	6057.013327004534	5362.282573835753	4936.890774932752	4800.122913086476	5201.684293720192	4812.290794581716	1.022735386145538	1.186543275932285	1.0547183024563758	1.1269609241782703	1.2586548871535952	1.1142889743639948	1.02589203056709	0.9974714991228418	1.0809164524257147	1.0	12.232508108228695	-8.721794505888225	5.065536881152738	1.0253656471746073	1.1337320411310274	0.37162590515310867	0.06451778256707393	0.2067299173416703	12.344358331301809	0.02591948009200764	0.01924784208986707	1.8976035935066397e-09	8.721794505888225	0.10836639395642012	
TVIIEQSWGS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	TVIIEQSWGSPK	12	0	P10809;C9JL19;C9JCQ4;C9JL25;E7EXB4;E7ESH4;P10809-2	P10809	HSPD1	60 kDa heat shock protein, mitochondrial	1	T(0.001)VIIEQS(0.051)WGS(0.949)PK	182.02	0.00084962	44720000.0	3414.5	2468.6	4983.5	3679.6	2409.8	2255.4	2264.2	2975.1	2758.9	4003.3	True	False	3264.40266840686	2876.494190974505	3937.5314535570037	3357.0151809475483	2726.7309388035737	2691.2241298269123	2772.0044866962776	2870.464046697266	2630.6393411809895	3278.263577229856	0.9957718748061409	0.877444452896967	1.2011027669972258	1.0240223526456764	0.8317607399670013	0.820929759437161	0.8455709620025827	0.8756050204855151	0.8024490036288934	1.0	11.678716138573284	-7.756454239304245	24.7745115549186	0.8535526017623988	1.0266837274671992	0.43864560286679544	0.08933339939307883	100.50366067699225	499466.2136293501	0.026671677036522408	0.033337590388376054	1.752047033992423e-08	7.756454239304245	0.17313112570480038	
TVIRLPSGSGAAS(ph)PTGSAVDIR	ddPTM_K562_Methotrexat_30min_R1	2	TVIRLPSGSGAASPTGSAVDIR	22	1	Q09666	Q09666	AHNAK	Neuroblast differentiation-associated protein AHNAK	1	TVIRLPS(0.007)GS(0.013)GAAS(0.973)PT(0.007)GSAVDIR;TVIRLPSGSGAAS(0.496)PT(0.319)GS(0.185)AVDIR	154.07	2.209e-20	96919000.0	1963.56	1575.46	2167.88	2297.99	1763.5800000000002	1429.8600000000001	1426.53	1811.58	1612.33	1996.93	True	False	1877.2442535003581	1835.7779867587676	1712.8716138330813	2096.5287845596413	1995.521681905223	1706.160208510379	1746.465665756931	1747.8657045866817	1537.3731302208637	1635.2666263526628	1.1479744179011395	1.1226169220204354	1.0474570851198195	1.2820715293601928	1.2203035576871533	1.043352919343703	1.0680005557578638	1.0688567090035723	0.9401360643247866	1.0	10.675310167575695	-8.845480764039149	1.3245312279917283	0.9972156254959085	1.1570166055696285	0.5006839543063989	0.06836563050483513	0.42483920416173676	1.480311891897439	0.04851040999389271	0.026046402847366375	1.427313047937684e-09	8.845480764039149	0.15980098007372	
TVIRLPSGSGAASPT(ph)GSAVDIR	ddPTM_K562_Methotrexat_30min_R1	1	TVIRLPSGSGAASPTGSAVDIR	22	1	Q09666	Q09666	AHNAK	Neuroblast differentiation-associated protein AHNAK	1	TVIRLPSGSGAAS(0.168)PT(0.664)GS(0.168)AVDIR	92.613	0.0018105	66482000.0	1290.1	1064.1	1436.2	1269.5	984.23	1087.1	1331.6	1160.0	1120.7	1196.9	True	False	1233.3887487221223	1239.9244383925995	1134.7612468342677	1158.2049060259035	1113.6734965136689	1297.1666895162	1630.2451967515083	1119.202142505741	1068.5989016135175	980.1298118018669	1.2583932596179939	1.2650614474353423	1.1577662807216595	1.1816852136113114	1.1362510180833043	1.3234641716809874	1.6632951851086661	1.1418917464087783	1.0902626251608543	1.0	9.936829027206983	-9.511854387315644	24.925087875848565	1.0687798122249343	1.2795415942379833	0.32065429948548196	0.141415133303224	714.3583425524386	1615119.6960958273	0.09197245326645555	0.03983508765518889	3.0771283586169036e-10	9.511854387315644	0.21076178201304896	
TVKQEQINTEPLEDTVLS(ph)PTK	ddPTM_K562_Methotrexat_30min_R1	1	TVKQEQINTEPLEDTVLSPTK	21	1	O15446;O15446-2	O15446	CD3EAP	DNA-directed RNA polymerase I subunit RPA34	1	TVKQEQINT(0.001)EPLEDT(0.166)VLS(0.597)PT(0.236)K	61.022	0.015362	22421000.0	6281.0	3795.9	10478.0	7368.6	4392.7	4180.7	4024.6	5349.5	5910.5	9018.0	True	False	6004.8947606570455	4423.107955732046	8278.810990342196	6722.6062784895375	4970.4170449342055	4988.561106485491	4927.218998833073	5161.355052874538	5635.722145076018	7384.75281379333	0.8131476993300346	0.5989513890662004	1.1210681249721635	0.9103359920095054	0.6730647822971679	0.6755217449076694	0.6672151557503664	0.698920489692505	0.7631565046496274	1.0	12.850333915837275	-7.7611563261471685	24.999998692225056	0.7237646673010938	0.8607520866488702	0.11110572576623656	0.15086398856994893	14.834706225221373	1310137.8199222286	0.0461338745380827	0.05590031940319739	1.7331800199343495e-08	7.7611563261471685	0.13698741934777636	
TVLEGSTASTS(ph)PADHSALPNQSLTVR	ddPTM_K562_Methotrexat_30min_R1	2	TVLEGSTASTSPADHSALPNQSLTVR	26	0	Q8NFC6	Q8NFC6	BOD1L1	Biorientation of chromosomes in cell division protein 1-like 1	1	TVLEGS(0.005)T(0.018)AS(0.05)T(0.204)S(0.723)PADHSALPNQSLTVR;T(0.001)VLEGS(0.025)T(0.071)AS(0.062)T(0.205)S(0.636)PADHS(0.001)ALPNQSLTVR	95.891	3.5398e-06	108434000.0	1029.49	829.99	1592.19	1377.3400000000001	921.02	1088.3400000000001	1029.83	1286.4299999999998	1516.37	1464.74	True	False	984.2348522765203	967.1317400822044	1258.0110775637468	1256.5907406583046	1042.15027357327	1298.646301966757	1260.7955924982014	1241.1855277445345	1445.8742896758188	1199.4613923792026	0.8205640119222448	0.806305018424846	1.0488133136727373	1.0476291680933412	0.8688485350129554	1.08269120641792	1.051134784753129	1.0347857260187172	1.2054362890395678	1.0	10.228171006345573	-4.930277504831296	0.4181088372741546	1.0772220332686726	1.5256936681732927e-09	0.5088435615325627	0.08419231976685228	12.709419415274152	0.7299978888928542	0.06024055011449939	8.605776886293583	1.1741470604770258e-05	4.930277504831296	-1.077222031742979	
TVMDGGLES(ph)DGPNMTENGLEDESRPQR	ddPTM_K562_Methotrexat_30min_R1	2	TVMDGGLESDGPNMTENGLEDESRPQR	27	1	P51116	P51116	FXR2	Fragile X mental retardation syndrome-related protein 2	1	T(0.005)VMDGGLES(0.601)DGPNMT(0.393)ENGLEDESRPQR;T(0.01)VMDGGLES(0.571)DGPNMT(0.419)ENGLEDESRPQR	80.683	0.00045063	23778000.0	3154.3	2141.31	2717.8	2614.4	2517.9	2086.6000000000004	1942.64	2514.4	2833.3999999999996	2301.8	True	False	3015.640748852176	2495.1250814532996	2147.3709209345297	2385.199611117859	2849.0479835727087	2489.80591881566	2378.3264711755405	2425.9671268245124	2701.67585244199	1884.921715101962	1.5998758594009033	1.3237287583152118	1.1392361304609253	1.2654104369468921	1.5114940640484869	1.320906804175142	1.2617640574249995	1.2870386644642604	1.433309315074577	1.0	10.88028889113773	-12.426161406330417	3.546152734885795	0.9968723745692036	1.3393491526013095	0.4031377898971997	0.12696009380725157	29692471.49625801	37258053.77661905	886803.876430341	0.032504150107850224	3.7483366874375094e-13	12.426161406330417	0.34247677803210586	
TVPST(ph)PTLVVPHR	ddPTM_K562_Methotrexat_30min_R1	2	TVPSTPTLVVPHR	13	0	P12270	P12270	TPR	Nucleoprotein TPR	1	TVPS(0.011)T(0.989)PTLVVPHR;TVPS(0.007)T(0.988)PT(0.005)LVVPHR	162.88	9.841e-05	39122000.0	9560.8	6614.700000000001	6009.1	6353.9	5726.6	5560.4	5057.0	6364.3	7928.200000000001	7054.3	True	False	9140.518679778676	7707.66674432434	4747.872029210278	5796.86345206616	6479.748275438848	6634.868604899157	6191.160979252307	6140.463961680423	7559.619712476387	5776.697912435384	1.5823085815344542	1.3342686187090027	0.8219006950302226	1.003490841989048	1.1217045401474122	1.1485573082532852	1.07174740190667	1.0629712778405753	1.3086403040399504	1.0	12.496029336787483	-6.539981077596758	6.2823188865767525	1.0716916386343616	1.5265111013045292	0.6594195010910877	0.11844624409192249	0.07981383897177736	12.222272086203537	0.03101162307597173	0.09067202370881891	2.8841571643961726e-07	6.539981077596758	0.4548194626701676	
TVPSTPTLVVPHRT(ph)DGFAEAIHSPQVAGVPR	ddPTM_K562_Methotrexat_30min_R1	1	TVPSTPTLVVPHRTDGFAEAIHSPQVAGVPR	31	1	P12270	P12270	TPR	Nucleoprotein TPR	1	TVPST(0.003)PT(0.003)LVVPHRT(0.921)DGFAEAIHS(0.073)PQVAGVPR	60.138999999999996	0.00040433	17077000.0	1672.4	1237.5	1766.2	1477.2	1031.9	1169.2	801.61	1463.2	1407.9	1776.4	True	False	1598.883298475218	1441.9758410965526	1395.4987565510946	1347.6961695009572	1167.6129370700496	1395.131352573213	981.3914480083924	1411.7384266503448	1342.4470363002333	1454.6767463320564	1.0991330565411017	0.991268915745351	0.959318804036582	0.9264574916036509	0.8026614435228765	0.959066236599309	0.6746457248890209	0.9704825695536965	0.922849038238352	1.0	10.506482882279506	-6.493487403688665	1.0600923396416086	0.8808273460244376	1.150968320627192	0.3347972541607288	0.09011703617333365	1.367969215431305	1.663097035471336	0.029022416578565503	0.3827959657976083	3.2100559075746936e-07	6.493487403688665	0.2701409746027543	
TVPSTPTLVVPHRTDGFAEAIHS(ph)PQVAGVPR	ddPTM_K562_Methotrexat_30min_R1	1	TVPSTPTLVVPHRTDGFAEAIHSPQVAGVPR	31	1	P12270	P12270	TPR	Nucleoprotein TPR	1	TVPS(0.001)T(0.001)PT(0.002)LVVPHRT(0.024)DGFAEAIHS(0.973)PQVAGVPR	65.298	0.00010715	29185000.0	600.3	528.83	667.19	587.91	637.75	497.66	640.36	576.43	726.69	609.68	True	False	573.9115307789245	616.210168926942	527.1559366908193	536.3688430891602	721.625303436791	593.825751729033	783.9770307838656	556.1566301763658	692.9063405135427	499.2610440800088	1.1495219536634882	1.2342444423286338	1.0558723596434658	1.074325444472701	1.4453867610811377	1.1894093456125325	1.5702747892708206	1.1139595944265965	1.387863821401017	1.0	8.963650531441429	-7.7410375704439085	24.999326077501706	1.2997163780275183	1.130857793584698	0.1805975251967037	0.1607951407711901	379.0801497155493	464503.57725787273	0.04456212258211857	0.05745935020495876	1.815358610860395e-08	7.7410375704439085	-0.16885858444282031	
TVQPTQS(ph)PYPTQLFR	ddPTM_K562_Methotrexat_30min_R1	1	TVQPTQSPYPTQLFR	15	0	A0A0U1RRL5;P32519-2;P32519	A0A0U1RRL5	ELF1	ETS-related transcription factor Elf-1	1	TVQPT(0.139)QS(0.857)PYPT(0.005)QLFR	107.62	0.0015622	9203900.0	1241.2	918.04	1108.1	1510.5	1099.3	923.57	1181.1	1125.4	1038.6	1305.1	True	False	1186.6383341709168	1069.7305059881044	875.5249530824756	1378.076810202541	1243.8772184524723	1102.036831419811	1445.9917406752822	1085.8190441172078	990.3157126936728	1068.7337433224302	1.1103217631006486	1.000932657616457	0.8192170955140651	1.2894482080433236	1.1638794285521146	1.031161258176288	1.3529953084292536	1.0159864895270019	0.926625287992709	1.0	10.061686759765664	-5.89965689175961	18.415146486415132	1.0760199751573927	3.5296801025474567	0.003938229927028081	0.1533904131737861	2508.506881342218	486295.69753959106	0.03797711580137183	14493.170439973015	1.2599204010764714e-06	5.89965689175961	2.453660127390064	
TVQSPNS(ph)SVPSPGLAGPVTMTSVHPPIR	ddPTM_K562_Methotrexat_30min_R1	1	TVQSPNSSVPSPGLAGPVTMTSVHPPIR	28	0	O15164-2;O15164	O15164-2	TRIM24	Transcription intermediary factor 1-alpha	1	T(0.001)VQS(0.008)PNS(0.424)S(0.283)VPS(0.283)PGLAGPVTMTSVHPPIR	105.38	2.6157e-10	75347000.0	1416.9	1465.4	1588.2	1885.3	1418.5	1125.1	1480.1	1312.1	1783.7	1678.9	True	False	1354.6147725481553	1707.5324424588991	1254.8585240371697	1720.0186761170817	1605.0576133674444	1342.5096517106767	1812.0501019164217	1265.9526992946408	1700.7761763255392	1374.8349411263728	0.9852926573413595	1.2419908684165057	0.9127339482724312	1.2510728558498136	1.1674547724634168	0.9764878761451811	1.318012837549683	0.9208034080494586	1.2370766304005407	1.0	10.42504270772669	-5.9765465290207365	12.250851834242358	1.1132644292075218	0.7373102392407419	0.06787978662999417	0.1430174878355043	171867.02864048886	2658538.649242505	0.03236751128940458	1166666.028706425	1.0554884152645594e-06	5.9765465290207365	-0.3759541899667799	
TVQSPNSSVPS(ph)PGLAGPVTMTSVHPPIR	ddPTM_K562_Methotrexat_30min_R1	1	TVQSPNSSVPSPGLAGPVTMTSVHPPIR	28	0	O15164-2;O15164	O15164-2	TRIM24	Transcription intermediary factor 1-alpha	1	TVQS(0.001)PNS(0.024)S(0.018)VPS(0.954)PGLAGPVT(0.002)MT(0.001)SVHPPIR	63.563	0.0095292	81918000.0	1466.8	931.78	1343.4	1263.5	1095.2	1166.6	1028.8	1294.6	1742.3	1284.9	True	False	1402.3212282967286	1085.740807448037	1061.4386986472318	1152.730916710303	1239.2379965879622	1392.0289393704331	1259.5345887788765	1249.0681842137349	1661.300853289222	1052.1921590644329	1.3327615267002335	1.031884526124424	1.008787881094857	1.0955517077177854	1.1777677545989726	1.3229797688363023	1.1970575696922168	1.1871103328923838	1.5788949185540255	1.0	10.039182488924592	-8.001646346194004	3.986079528439214	1.264922824025146	1.1047706696895825	0.14589823470470076	0.1579943517457203	0.3786225491732385	13.800220232867613	0.050732023359667255	0.05479082508364529	9.962163240051487e-09	8.001646346194004	-0.1601521543355635	
TVS(ph)FEALPIMR	ddPTM_K562_Methotrexat_30min_R1	1	TVSFEALPIMR	11	0	O15084-2;O15084;O15084-4;O15084-1	O15084-2	ANKRD28	Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A	1	TVS(1)FEALPIMR	109.39	0.0022593000000000005	11873000.0	2637.4	1909.6	2577.1	2651.7	1784.9	1643.0	1703.2	2471.1	2047.7	2372.5	True	False	2521.4630539335926	2225.1289423498797	2036.2019281552655	2419.229578029843	2019.6456356006713	1960.4864969875032	2085.185956073271	2384.1900123671853	1952.5028739484242	1942.817260004955	1.2978385079444692	1.1453104664842255	1.0480666247272645	1.2452172563175978	1.0395448286245514	1.0090946469059592	1.0732795096065562	1.227181815525514	1.0049853448097557	1.0	10.923934493108227	-3.0000164569930434	0.8879057756412064	1.0836664678927161	99.42688860005767	0.38260379861380867	0.08315344726515225	939.6875060354506	2.188703333442231	0.0278448066042098	187123.6415492248	0.0009999621070910971	3.0000164569930434	98.34322213216495	
TVS(ph)PCQVQASCSQEENR	ddPTM_K562_Methotrexat_30min_R1	2	TVSPCQVQASCSQEENR	17	0	Q711Q0-3;Q711Q0	Q711Q0-3	C10orf71	Uncharacterized protein C10orf71	1	T(0.146)VS(0.854)PCQVQASCSQEENR;T(0.128)VS(0.87)PCQVQAS(0.003)CSQEENR	110.04	0.00093297	16696900.0	2260.06	1759.1599999999999	2670.35	2247.9	2057.7599999999998	1685.55	1805.02	2697.9500000000003	2329.91	2632.66	True	False	2160.710468519433	2049.831289392657	2109.8800274919126	2050.8300970898995	2328.3915082714066	2011.2586822868448	2209.841682968164	2603.0615692873826	2221.5929926459803	2155.8597630030117	1.0022500097639304	0.9508184737106173	0.9786722047972863	0.9512817727221687	1.080029206087165	0.9329264903043858	1.025039624975401	1.2074354807111571	1.0304904942199975	1.0	11.074047619616923	-9.009109885641704	24.723995456926062	1.0946253094967855	0.9836125858616225	0.31030313438837676	0.06336489532917981	367.4488072858493	997245.0518066005	0.026106351579342317	0.016542719541508356	9.792421851840664e-10	9.009109885641704	-0.11101272363516301	
TVS(ph)SPIPYTPSPSSSR	ddPTM_K562_Methotrexat_30min_R1	1	TVSSPIPYTPSPSSSR	16	0	Q16204	Q16204	CCDC6	Coiled-coil domain-containing protein 6	1	T(0.022)VS(0.489)S(0.489)PIPYTPSPSSSR	236.05	2.7088e-51	25000000.0	1672.0	1696.8	2658.3	2298.9	1568.9	1809.7	1865.9	1364.7	1404.7	1111.7	True	False	1598.500881996272	1977.1673593314179	2100.3591578189203	2097.3590062725093	1775.2378495679827	2159.3989127195905	2284.3755727085004	1316.7027274806758	1339.3958036017732	910.3603574067472	1.7558990448021727	2.171851336940437	2.307173352541409	2.3038777877444563	1.9500386139670294	2.372026522410153	2.509309147880487	1.446353322360648	1.47128089739889	1.0	9.83029392512361	-9.375426989121316	5.1638637560864264	1.3071501878409775	2.198991545526287	0.7578212416570203	0.23142345940468936	0.11570353939423253	4.4510918642997	0.1346615109649162	0.062220674242314755	4.2128210412013024e-10	9.375426989121316	0.8918413576853097	
TVS(ph)SPPT(ph)S(ph)PRPGSAATVSASTSNIIPPR	ddPTM_K562_Methotrexat_30min_R1	1	TVSSPPTSPRPGSAATVSASTSNIIPPR	28	1	O76094-2;O76094	O76094-2	SRP72	Signal recognition particle subunit SRP72	3	T(0.008)VS(0.468)S(0.509)PPT(0.657)S(0.657)PRPGS(0.412)AAT(0.081)VS(0.079)AS(0.08)T(0.024)S(0.024)NIIPPR	60.388000000000005	0.0021917	15635000.0	733.18	697.48	644.55	605.82	476.08	528.27	706.24	617.16	692.92	833.13	True	False	700.9502850849435	812.7267148670903	509.2677632969134	552.7087011962292	538.692864696491	630.350701012531	864.6322978024815	595.4541329903819	660.7063004426145	682.2420838052383	1.0274216465442285	1.1912585490681955	0.7464619603300456	0.8101357484625833	0.7895919608065006	0.9239399268610335	1.2673394361425976	0.8727900947845487	0.9684338098252355	1.0	9.414139939484938	-10.011786121506736	23.54742020733806	1.0000000246945655	0.9517740529714441	0.007569107219294602	0.16068216866704976	2525.756520429689	5046210.904902276	0.1650031549072786	0.042603631330615864	9.732263939186721e-11	10.011786121506736	-0.048225971723121375	
TVSAS(ph)STGDLPK	ddPTM_K562_Methotrexat_30min_R1	1	TVSASSTGDLPK	12	0	H7C5L6;P78362;P78362-2	H7C5L6	SRPK2	SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal	1	TVSAS(0.612)S(0.339)T(0.049)GDLPK	182.23	0.00079325	18137000.0	4381.8	3049.1	5783.5	3982.2	2604.4	2767.6	2893.9	3467.1	3490.0	4652.9	True	False	4189.181318619178	3552.9119491616166	4569.622386203864	3633.086708764358	2946.924249738578	3302.3995307745704	3542.9307411228515	3345.160127829013	3327.750661757095	3810.2147224771584	1.0994606928335102	0.9324702695106223	1.199308364236488	0.953512327620832	0.7734273431767845	0.8667226839718789	0.9298506775018349	0.8779453053118759	0.8733761491514063	1.0	11.89565658692769	-7.515476219892656	24.586646748476134	0.8802465715440929	1.0649174279309486	0.5233908188857281	0.08077351252352549	208.06911269075684	691079.1643831166	0.02245161245075589	0.030277251139832834	3.051573115651687e-08	7.515476219892656	0.18467085638685565	
TVSASS(ph)TGDLPK	ddPTM_K562_Methotrexat_30min_R1	1	TVSASSTGDLPK	12	0	H7C5L6;P78362;P78362-2	H7C5L6	SRPK2	SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal	1	TVSAS(0.001)S(0.716)T(0.283)GDLPK	199.8	8.0418e-11	16327000.0	2888.2	2544.6	4130.4	3229.1	2757.7	2370.8	2090.6	2509.8	2779.7	3737.7	True	False	2761.2381862330326	2965.0518991953863	3263.4854852557146	2946.009816501176	3120.385886770109	2828.9235465964534	2559.4702675943986	2421.5289114318175	2650.472353720974	3060.7663109464784	0.9021394989737642	0.9687286117176668	1.0662315099275088	0.962507266877942	1.0194786435051928	0.9242533598462366	0.8362187790818096	0.7911511907235447	0.8659505772269724	1.0	11.5796771841795	-8.53835668634353	4.062800370821017	0.8568681196482971	0.9858983832458518	0.3885903567445911	0.06394285988364665	0.19045670822796892	7.244398908346007	0.024517728014992416	0.019477699732909918	2.894964974419811e-09	8.53835668634353	0.12903026359755465	
TVSGPGT(ph)PEPRPATPGASSVEQLRK	ddPTM_K562_Methotrexat_30min_R1	1	TVSGPGTPEPRPATPGASSVEQLRK	25	2	Q9H3U1	Q9H3U1	UNC45A	Protein unc-45 homolog A	1	TVS(0.006)GPGT(0.929)PEPRPAT(0.065)PGASSVEQLRK	86.73200000000001	0.00022318	69699000.0	2234.6	1386.2	2683.9	2466.1	1360.3	1327.0	1432.9	2013.3	1797.2	2622.5	True	False	2136.3696596344894	1615.2459886287213	2120.5860676636207	2249.9008418672547	1539.2032932419693	1583.4239692650135	1754.2643004094593	1942.4910978506964	1713.648564272164	2147.539837455424	0.9947986167119629	0.7521378465056059	0.9874490012610243	1.0476643099357432	0.7167286335725161	0.737319951717953	0.8168715987536936	0.9045192382332309	0.7979589176341573	1.0	11.068469178664385	-6.219830835750322	22.291164561139542	0.8591406776966093	0.9948002680707099	0.11086900290245993	0.11225227018477227	15339.109184584653	8216997.863114756	0.028949657074713555	8.444120219704509	6.02794337836184e-07	6.219830835750322	0.13565959037410058	
TVSGPGTPEPRPAT(ph)PGASSVEQLR	ddPTM_K562_Methotrexat_30min_R1	1	TVSGPGTPEPRPATPGASSVEQLR	24	1	Q9H3U1	Q9H3U1	UNC45A	Protein unc-45 homolog A	1	TVSGPGTPEPRPAT(0.7)PGAS(0.15)S(0.15)VEQLR	76.417	0.006175899999999999	51804000.0	985.92	1044.6	1252.7	1233.6	958.32	982.93	960.11	1265.6	1414.0	1328.0	True	False	942.5801373072744	1217.2023948359267	989.7753891583949	1125.4522032875573	1084.3558773650261	1172.8673113109724	1175.4391077298662	1221.0881306510914	1348.2634486316713	1087.486331416894	0.866751250178179	1.1192806379920424	0.9101497283821574	1.034911585344891	0.9971213853807347	1.0785122326851087	1.0808771326793394	1.1228537733068578	1.2397980642892392	1.0	10.08678155254668	-8.460194204545635	1.2122825978681226	1.130952258570856	0.9841125838948691	0.342008862789858	0.08363740229759944	0.509620651725353	1.5315264035054907	0.04391025410065773	0.033115305617115974	3.4658183393327068e-09	8.460194204545635	-0.1468396746759869	
TVSLPLSS(ph)PNIK	ddPTM_K562_Methotrexat_30min_R1	2	TVSLPLSSPNIK	12	0	Q8IWZ3-6;A0A0A0MQZ8;H0Y7Y3;H0Y785;H0Y472;H0Y4P6;Q8IWZ3;Q8IWZ3-4	Q8IWZ3-6	ANKHD1	Ankyrin repeat and KH domain-containing protein 1	1	TVSLPLS(0.099)S(0.901)PNIK;TVSLPLS(0.063)S(0.937)PNIK	257.2	1.5469e-87	44717000.0	9532.5	7425.9	13252.400000000001	9360.4	8772.8	7300.7	6465.1	12081.6	11596.7	16342.5	True	False	9113.462713893221	8652.903756281932	10470.902344761485	8539.788264958537	9926.576969016507	8711.456949821464	7915.063248361505	11656.683280083926	11057.571948194409	13382.714887937183	0.6809875866150186	0.646573122773573	0.7824198925585475	0.6381207652160378	0.741746129401894	0.6509484079103961	0.5914392792972022	0.8710253022419946	0.826257754184198	1.0	13.70808319792418	-9.73533615108356	1.4962934161873356	0.9785153110962523	0.6808276132294947	0.6983253279637848	0.06648281805969997	0.2016905612888325	0.8872769078353038	0.06016853865145085	0.018533318865685686	1.83934776487734e-10	9.73533615108356	-0.29768769786675764	
TVSPGSVS(ph)PIHGQGQVVENLK	ddPTM_K562_Methotrexat_30min_R1	2	TVSPGSVSPIHGQGQVVENLK	21	0	A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3	A0A087WVF7	ITSN2	Intersectin-2	1	T(0.007)VS(0.007)PGS(0.168)VS(0.819)PIHGQGQVVENLK;TVSPGS(0.057)VS(0.943)PIHGQGQVVENLK	101.41	6.7953e-05	46635000.0	4100.1	2497.2	4844.3	4075.8	3005.8	2496.8	2477.8999999999996	3744.7	3647.0	4844.1	True	False	3919.864513321121	2909.8198548576274	3827.547631276453	3718.480942087733	3401.1153854493227	2979.2712633465603	3033.6321515699633	3612.9967784838364	3477.4517660252523	3966.7865497112743	0.9881712726908464	0.7335458609612915	0.964898812504808	0.9374038394776714	0.8573981339371224	0.7510540902593836	0.7647581016908431	0.9108119968660303	0.8766420180280085	1.0	11.953755053721283	-10.303974558298881	1.6483600124456341	0.9995086223997115	0.857411860966836	0.18479034104975356	0.08537375542072506	2.072500583611146	8.622160736431523	0.08328218549973669	0.02378000381050499	4.9662141351578697e-11	10.303974558298881	-0.14209676143287553	
TVSQQS(ph)FDGVSLDSSGPEDR	ddPTM_K562_Methotrexat_30min_R1	1	TVSQQSFDGVSLDSSGPEDR	20	0	H7C1J4;Q6BDS2	H7C1J4	UHRF1BP1	UHRF1-binding protein 1	1	TVSQQS(0.999)FDGVS(0.001)LDSSGPEDR	160.05	2.2647e-14	11216000.0	695.5	602.52	823.09	985.39	728.66	594.63	713.26	930.62	866.46	1066.6	True	False	664.9266527681858	702.0761889111069	650.3346571903752	899.0023886166721	824.4915619008258	709.5338318342541	873.2267115011873	897.8895671195626	826.1784637209321	873.4284044346825	0.7612835229449089	0.8038165296049863	0.7445769497401422	1.0292800005726195	0.9439715467399636	0.8123548859090431	0.9997690790310103	1.0280059161812034	0.9459029034619816	1.0	9.770545638995387	-7.253981873005746	24.994193387082483	0.9609147684222232	0.7732847419270866	0.6862298560030125	0.060576541464656915	359.64733972447004	1205372.519522499	0.017519266135004517	0.02960109265580252	5.572090057635884e-08	7.253981873005746	-0.1876300264951366	
TVSS(ph)PIPYTPSPSSSR	ddPTM_K562_Methotrexat_30min_R1	1	TVSSPIPYTPSPSSSR	16	0	Q16204	Q16204	CCDC6	Coiled-coil domain-containing protein 6	1	TVS(0.017)S(0.838)PIPYT(0.016)PS(0.034)PS(0.002)S(0.036)S(0.056)R	127.3	0.00014793	27070000.0	1304.9	1440.9	2200.4	1730.1	1535.6	1305.6	1122.5	1201.4	1133.2	1171.2	True	False	1247.5381584431425	1678.9842338876958	1738.5661102451759	1578.424819153537	1737.5583158879438	1557.8887221344405	1374.249198973842	1159.1460810399974	1080.5177793418738	959.0843308399598	1.3007596082302344	1.7506116823087419	1.8127353918112197	1.6457622842937731	1.8116846037576295	1.6243500931456694	1.4328762912540587	1.2085966205128436	1.1266139426921546	1.0	9.905513864596436	-9.187887974936698	1.432177253506667	1.0506736928009028	1.6817210264090536	0.7599933580462537	0.13898293903559963	0.2090386575335768	0.7788587029006865	0.11009064695023635	0.04462260225332014	6.488017685915386e-10	9.187887974936698	0.6310473336081508	
TVSS(ph)PPT(ph)SPRPGSAATVSASTSNIIPPR	ddPTM_K562_Methotrexat_30min_R1	2	TVSSPPTSPRPGSAATVSASTSNIIPPR	28	1	O76094-2;O76094	O76094-2	SRP72	Signal recognition particle subunit SRP72	2	T(0.011)VS(0.078)S(0.79)PPT(0.51)S(0.505)PRPGS(0.027)AAT(0.004)VS(0.004)AS(0.005)T(0.047)S(0.018)NIIPPR;T(0.006)VS(0.067)S(0.831)PPT(0.815)S(0.268)PRPGS(0.003)AAT(0.002)VSAS(0.001)T(0.005)S(0.002)NIIPPR	90.545	5.5266e-05	732080000.0	9596.3	8757.2	12889.099999999999	10993.0	8257.5	8275.4	8554.3	9918.3	10303.599999999999	10910.2	True	False	9174.45814228518	10204.1784530511	10183.854049973237	10029.260757733558	9343.505986874634	9874.503930109797	10472.819530317978	9569.46776725405	9824.587884951407	8934.257058000445	1.0268854010720052	1.1421406824100127	1.1398657978901339	1.1225623678191081	1.0458067107558446	1.1052406334410738	1.1722093356313026	1.0710983246989503	1.0996535941568515	1.0	13.125132049373464	-10.52891088085147	1.3552432010968727	1.0000712571307158	1.1071700645858762	0.343122214285005	0.04263951775810396	3.064506260554399	6.701267816937955	0.041004735355692754	0.01209290879157432	2.958619526076213e-11	10.52891088085147	0.10709880745516043	
TVSSPPT(ph)S(ph)PRPGSAATVSASTSNIIPPR	ddPTM_K562_Methotrexat_30min_R1	2	TVSSPPTSPRPGSAATVSASTSNIIPPR	28	1	O76094-2;O76094	O76094-2	SRP72	Signal recognition particle subunit SRP72	2	T(0.007)VS(0.039)S(0.303)PPT(0.827)S(0.824)PRPGSAATVSASTSNIIPPR;T(0.004)VS(0.048)S(0.329)PPT(0.793)S(0.791)PRPGS(0.002)AAT(0.001)VS(0.009)AS(0.003)T(0.016)S(0.005)NIIPPR	93.34	2.8151e-05	510900000.0	8881.8	7692.1	9886.1	8213.3	7356.200000000001	7145.0	6873.1	8495.0	8427.1	9437.599999999999	True	False	8491.366706767038	8963.088781655597	7811.142711550101	7493.252740970899	8323.669238952129	8525.67012840883	8414.56763426914	8196.226034988167	8035.3259603705455	7728.359187786195	1.0987282682444017	1.1597660724440386	1.0107116558317755	0.9695787370769651	1.0770292938903194	1.103166910497987	1.0887909619376155	1.0605389625188983	1.0397195271500161	1.0	12.915946431940801	-10.774151357628591	0.00844671385443379	4.6843042052893254e-07	2.077223627704393	0.16389426215784852	0.04928029012962079	9209.21648581447	27.16263817298773	3426.5270947473964	3251.7915187272674	1.6820877280853062e-11	10.774151357628591	2.0772231592739723	
TVSSPPT(ph)SPRPGSAATVSASTSNIIPPR	ddPTM_K562_Methotrexat_30min_R1	2	TVSSPPTSPRPGSAATVSASTSNIIPPR	28	1	O76094-2;O76094	O76094-2	SRP72	Signal recognition particle subunit SRP72	1	T(0.022)VS(0.024)S(0.107)PPT(0.406)S(0.406)PRPGS(0.005)AAT(0.002)VS(0.002)AS(0.011)T(0.011)S(0.004)NIIPPR;T(0.005)VS(0.014)S(0.045)PPT(0.464)S(0.464)PRPGS(0.002)AAT(0.001)VS(0.001)AS(0.001)T(0.004)S(0.001)NIIPPR	64.707	0.0037227	165513000.0	1814.04	1750.89	2303.94	2085.27	1811.2600000000002	1672.62	1659.58	2287.99	1784.33	2174.7200000000003	True	False	1734.2969736701646	2040.1948124586202	1820.3744792029947	1902.4576166905363	2049.4724376368818	1995.8301427822519	2031.783060697557	2207.5200948549236	1701.3768877630469	1780.85713453234	0.9738551959282223	1.1456252008639554	1.0221900701097126	1.0682819973597315	1.1508348412098095	1.1207132251551242	1.1409017721295824	1.2395829244520655	0.9553696670956342	1.0	10.798356068609252	-6.248488305275198	23.558375175433298	1.1022813714490016	0.9738550082794559	0.15977814083202968	0.08033319217129413	1597.1290359778102	2905109.9834603686	0.019256991154056397	0.32290455820789726	5.643021367243125e-07	6.248488305275198	-0.1284263631695457	
TVSSSS(ph)LPSLEEYEPR	ddPTM_K562_Methotrexat_30min_R1	1	TVSSSSLPSLEEYEPR	16	0	J3QS41;P42694	J3QS41	HELZ	Probable helicase with zinc finger domain	1	TVSSS(0.033)S(0.96)LPS(0.007)LEEYEPR	166.79	7.2636e-08	12152000.0	804.29	515.35	1122.4	949.22	578.67	746.79	487.66	753.87	703.5	659.04	True	False	768.9343746296532	600.5028280477643	886.8235785035386	866.0033563591237	654.7752478867384	891.0965983477167	597.0301687051971	727.355964802416	670.7944385518961	539.6814697718296	1.424792989380845	1.1126986225812963	1.6432351825577338	1.6046564591614731	1.2132624234135163	1.651152852671523	1.1062639763370303	1.3477504890244476	1.2429451002560814	1.0	9.075964342293288	-10.033740864984864	0.6436329206932293	1.002170391621328	1.4252392163116543	0.31187948032588797	0.18791336514275592	1.0687363416439817	1.0295211579151036	0.19119655340111705	0.07927411448355856	9.252500878774725e-11	10.033740864984864	0.42306882469032625	
TVTCVTVVEPEAPPS(ph)PDVLQAATHR	ddPTM_K562_Methotrexat_30min_R1	5	TVTCVTVVEPEAPPSPDVLQAATHR	25	0	A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6	A0A0J9YX88	PHRF1	PHD and RING finger domain-containing protein 1	1	TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(0.994)PDVLQAAT(0.006)HR;TVTCVTVVEPEAPPS(0.996)PDVLQAAT(0.004)HR;TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR	218.08	6.5821e-50	1009829000.0	8434.55	7521.21	9311.67	9162.31	7219.500000000001	6817.3099999999995	7176.110000000001	8666.55	8331.310000000001	9227.0	True	False	8063.777281245005	8763.962113788933	7357.277718499681	8359.064507703977	8168.990792884222	8134.658673632304	8785.53534008746	8361.742524252697	7943.989216562612	7555.900888541923	1.067215862171147	1.1598831486896504	0.9737128407357166	1.1062962088849	1.0811405434488974	1.0765967941649464	1.162738298143932	1.1066506360522521	1.0513622840936414	1.0	12.883388062546807														
TVTLELLDNGAGADAT(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	TVTLELLDNGAGADATK	17	0	A8K7I4	A8K7I4	CLCA1	Calcium-activated chloride channel regulator 1	1	TVTLELLDNGAGADAT(1)K	117.48	0.0011749	21202000.0	1634.1	1145.8	1197.0	1674.6	1366.2	1212.4	1266.5	1910.6	1824.1	2118.4	True	False	1562.266920616092	1335.1239747300453	945.7660579728583	1527.7904179842283	1545.8792466567525	1446.67914117325	1550.5448645883034	1843.4031150616113	1739.2979891435866	1734.737232284298	0.9005784227960003	0.7696404676643489	0.5451926899196576	0.880704229753827	0.891131646849559	0.8339471328855185	0.8938211711444906	1.0626411197932395	1.0026290764816772	1.0	10.760501433119611	-8.642169212379343	0.8404452025244943	1.03223297919421	0.7602124685254384	0.5018187703695618	0.0972627881677904	0.5297626378478782	0.7551318687412113	0.07850824357824095	0.05139733075068395	2.2794537647282295e-09	8.642169212379343	-0.27202051066877153	
TVTLPHEAERPDGSEDAEDDDDDDALSDWNLR	ddPTM_K562_Methotrexat_30min_R1	1	TVTLPHEAERPDGSEDAEDDDDDDALSDWNLR	32	1	A0A075B780;O14787-2;O14787	A0A075B780	TNPO2	Transportin-2	0		100.59	2.1956999999999998e-09	16824000.0	469.38	694.41	776.63	584.22	691.5	586.53	673.69	705.84	544.7	836.32	False	True	448.74661721974275	809.1494495481671	613.6259762769097	533.0023396600658	782.4443705629807	699.8686214717471	824.7821317208799	681.0152071260794	519.3770158908563	684.8543438935064	0.655243879550426	1.181491300687418	0.8959948662782043	0.778271094302859	1.1424974924078883	1.0219233150992109	1.2043175882215502	0.9943942287850568	0.7583758802464696	1.0	9.419653375384923	-7.763941430642046	24.99967857871387	1.029258017409056	0.9007492680395341	0.14451971822734055	0.1652525448073294	148.6691907533969	1485457.9527026203	0.05062657348588812	0.06010522742445377	1.7221008034432047e-08	7.763941430642046	-0.12850874936952184	
TWGDLGAAAGGGT(ph)PSK	ddPTM_K562_Methotrexat_30min_R1	1	TWGDLGAAAGGGTPSK	16	0	P31323	P31323	PRKAR2B	cAMP-dependent protein kinase type II-beta regulatory subunit	1	TWGDLGAAAGGGT(0.789)PS(0.211)K	117.07	0.0016096	11945000.0	1279.8	1061.8	1725.4	1309.8	1100.2	1012.1	794.6	1425.8	1454.3	1553.6	True	False	1223.5415243892508	1237.2444024859146	1363.2621189861054	1194.9718675956892	1244.895584227608	1207.6740009744694	972.8092770642446	1375.6538058488668	1386.6899104278918	1272.227985308197	0.9617313394445163	0.972502111864952	1.0715548901055303	0.9392749423808716	0.9785161139385188	0.9492591067959495	0.7646501164086418	1.0812950365304335	1.0899696645896109	1.0	10.313141511731585														
TYFPHFDLHPGSAQL	ddPTM_K562_Methotrexat_30min_R1	2	TYFPHFDLHPGSAQL	15	0	A0A494C057	A0A494C057			0	;	134.4	0.00011746	33090000.0	5679.5	5121.7	7350.0	6874.4	5324.1	5062.2	4584.799999999999	4695.1	4960.200000000001	4766.5	False	True	5429.835980441283	5967.973870985223	5807.335443692985	6271.732025194541	6024.312470447381	6040.398505812624	5613.05810909155	4529.970671791988	4729.601384655455	3903.2406616706476	1.3911097088533682	1.5289792222114322	1.4878240792888633	1.6068012630587176	1.5434130233386332	1.5475342233259168	1.4380507367150337	1.1605665815781623	1.211711445594316	1.0	11.930456702267257	-9.288771553215389	1.7889095816898362	1.0907757667913573	1.524955035304483	0.8654619459231652	0.06988862584031942	0.12808539797183788	0.749013621914192	0.053541591393718	0.02071234152743154	5.143141190077488e-10	9.288771553215389	0.4341792685131256	
TYFPHFDLHPGSAQLR	ddPTM_K562_Methotrexat_30min_R1	2	TYFPHFDLHPGSAQLR	16	0	P02008	P02008	HBZ	Hemoglobin subunit zeta	0	;	159.41	1.6931e-10	219270000.0	11258.9	7912.9	6757.9	14293.0	7220.7	6420.5	8317.1	16226.8	16429.8	18161.1	False	True	10763.972237026213	9220.372228697306	5339.509142167733	13039.954881314094	8170.348613917733	7661.170757095718	10182.421392236382	15656.094246562212	15665.98218410793	14871.948805342874	0.723776848475915	0.619984129140144	0.3590322433230452	0.8768154767066828	0.5493798237782036	0.5151423567530959	0.6846729722858016	1.0527264752913639	1.0533913469685825	1.0	13.86030608864695	-9.202540145113588	4.057550110355579	1.043520926140234	0.6063062390936539	0.6929442276534516	0.12780628635620722	0.12329802198771478	4.138223374978508	0.06590197147392697	0.03507593607712655	6.272777092955967e-10	9.202540145113588	-0.4372146870465802	
TYGGDTGS(ph)PEISFTK	ddPTM_K562_Methotrexat_30min_R1	1	TYGGDTGSPEISFTK	15	0	H0Y9X0;A0A286YEZ9;A0A2C9F2R7;O94915	H0Y9X0	FRYL	Protein furry homolog-like	1	T(0.012)YGGDT(0.307)GS(0.673)PEIS(0.008)FTK	117.0	0.00096602	10812000.0	882.46	617.44	1130.3	943.23	736.48	593.95	809.97	750.19	958.59	1391.4	True	False	843.6681150277687	719.4614653144693	893.0654764634256	860.5384903590488	833.3400289692324	708.7224314581423	991.6263908176776	723.8053924882606	914.0253601300096	1139.4039770583322	0.7404468757480709	0.6314366807565006	0.7838005610346441	0.7552531917439438	0.7313824119876399	0.6220115479041013	0.8703027291319617	0.6352491364449618	0.8021960415565723	1.0	10.154063631679552	-10.018445323711346	21.600133705015004	1.0000000054119464	0.7231650086040602	0.5731439436572472	0.0728679137153545	136.0421480812039	159311.22292899858	0.06593536334985006	0.01702443761013588	9.584173703981274e-11	10.018445323711346	-0.27683499680788626	
TYGGDTGSPEIS(ph)FTK	ddPTM_K562_Methotrexat_30min_R1	1	TYGGDTGSPEISFTK	15	0	H0Y9X0;A0A286YEZ9;A0A2C9F2R7;O94915	H0Y9X0	FRYL	Protein furry homolog-like	1	TYGGDT(0.024)GS(0.012)PEIS(0.964)FTK	145.1	1.0170000000000001e-08	5255200.0	1038.2	833.04	1507.3	1095.7	923.62	741.36	999.99	802.3	906.84	1171.7	True	False	992.561971105579	970.685700741069	1190.9383284732567	999.6416821839952	1045.0922191458858	884.6173276972955	1224.2632129014273	774.082654252031	864.6812063346141	959.4937759948597	1.0344642101262536	1.011664405779605	1.2412152723329775	1.0418428000197373	1.0892120879703182	0.9219625492412102	1.2759470082357116	0.8067615169774462	0.9011847997013442	1.0	9.906129637810311	-9.28385559739349	24.99590738541495	0.8904798680676878	1.0828777934232905	0.38048521276343916	0.10793399262257437	819.193570943739	913461.9895345055	0.056282405254254986	0.027069016089276785	5.201689235801854e-10	9.28385559739349	0.19239792535560274	
TYS(ph)ECEDGTYSPEISWHHR	ddPTM_K562_Methotrexat_30min_R1	1	TYSECEDGTYSPEISWHHR	19	0	P48651;P48651-2;P48651-3	P48651	PTDSS1	Phosphatidylserine synthase 1	1	T(0.297)Y(0.074)S(0.53)ECEDGT(0.08)Y(0.018)S(0.001)PEISWHHR	62.325	0.024191	24304000.0	1114.4	958.83	1375.4	1114.8	980.32	1098.0	895.41	1045.2	1001.5	1006.4	True	False	1065.4123103448826	1117.2603601766527	1086.7223359531063	1017.0672148386578	1109.2492629794665	1310.172960250931	1096.2284857489249	1008.4397235750008	954.940483595911	824.1312077846095	1.292770253427089	1.3556826262895918	1.3186278176194564	1.2341083619108295	1.3459619688002082	1.5897625861941036	1.3301625704670914	1.2236397724651646	1.1587238470958245	1.0	9.686730233191682	-9.803157262219734	1.5749171975189729	1.0114908847763189	1.3537212250252426	0.6186176006292773	0.08914073405103504	0.2564427791658219	1.3053394589839684	0.0912770048182725	0.027425551107250416	1.5734130132738453e-10	9.803157262219734	0.34223034024892374	
TYSECEDGTY(ph)SPEISWHHRK	ddPTM_K562_Methotrexat_30min_R1	2	TYSECEDGTYSPEISWHHRK	20	1	P48651;P48651-2;P48651-3	P48651	PTDSS1	Phosphatidylserine synthase 1	1	TYSECEDGT(0.053)Y(0.618)S(0.327)PEIS(0.003)WHHRK;TYSECEDGT(0.053)Y(0.807)S(0.136)PEIS(0.003)WHHRK	78.661	0.0018804000000000002	37379000.0	3951.8	3274.7	6118.7	4755.1	2959.5	2954.44	3046.8	3742.1	4320.8	4668.3	True	False	3778.0836037517156	3815.7885146172785	4834.468486982893	4338.227765769021	3348.7261239062045	3525.3437164697257	3730.1224582926525	3610.488221957528	4119.926951094574	3822.825633248106	0.9882960841563745	0.9981591839895537	1.2646322251625257	1.1348222968995314	0.8759819163033399	0.9221827136997558	0.9757500906792113	0.9444553762944811	1.0777177267156788	1.0	11.900423682118143	-7.747809623259053	24.974316151000245	0.9615325760027341	1.1014657925466842	0.3496951323044073	0.08692263308355845	268.4000758486572	491797.63149998366	0.027365753136241778	0.035133576107603155	1.7872708687953165e-08	7.747809623259053	0.13993321654395008	
TYSECEDGTYS(ph)PEISWHHR	ddPTM_K562_Methotrexat_30min_R1	2	TYSECEDGTYSPEISWHHR	19	0	P48651;P48651-2;P48651-3	P48651	PTDSS1	Phosphatidylserine synthase 1	1	TYSECEDGTYS(1)PEISWHHR;TYSECEDGT(0.297)Y(0.042)S(0.66)PEIS(0.001)WHHR	163.04	9.4159e-13	50461000.0	4330.68	3321.84	4923.3	4193.68	4026.3199999999997	4005.2	3803.3	4724.96	4335.5	4177.16	True	False	4140.308492609815	3870.717598374281	3889.9666108753286	3826.0265855082384	4555.851653051541	4779.14821529784	4656.286840496404	4558.780478667178	4133.943551303119	3420.6358464920095	1.2103914822900126	1.131578388370059	1.1372057083669505	1.1185132698156024	1.3318727445728367	1.3971520003215296	1.3612342995445132	1.3327289671428715	1.2085307342910043	1.0	11.740048810742882	-7.760564376278662	24.999789515533763	1.2992835841071075	1.1472750305588717	0.2099258211631525	0.10888628469210158	28.443369162977422	812640.6727353341	0.031652061862595525	0.03851245441387248	1.735543980891541e-08	7.760564376278662	-0.15200855354823584	
TYSS(ph)PGSFK	ddPTM_K562_Methotrexat_30min_R1	1	TYSSPGSFK	9	0	Q8N3Z6	Q8N3Z6	ZCCHC7	Zinc finger CCHC domain-containing protein 7	1	T(0.038)YS(0.02)S(0.942)PGS(0.001)FK	97.81299999999999	0.0090079	33219000.0	5840.7	4920.1	7487.3	6489.8	4289.3	4749.0	4062.7	5234.8	5031.9	6359.0	True	False	5583.949821456712	5733.062897599311	5915.818050008502	5920.8493100645155	4853.418132546337	5666.677038462357	4973.863893693565	5050.689116887113	4797.968067305306	5207.323480030143	1.0723262810291916	1.1009615437921911	1.1360573378426373	1.137023527109601	0.9320369958115685	1.088212986996835	0.9551670666837031	0.969920370081921	0.9213885186325188	1.0	12.346326314693455	-7.754993905031614	24.999965286540284	0.9806739090557339	1.1125803720895426	0.6663424997460153	0.046355948991806416	96.130444782207	372857.6522620927	0.01400378809554352	0.01763738397499656	1.7579482851541223e-08	7.754993905031614	0.1319064630338087	
VAAAAGSGPS(ph)PPGS(ph)PGHDR	ddPTM_K562_Methotrexat_30min_R1	1	VAAAAGSGPSPPGSPGHDR	19	0	Q9BTU6	Q9BTU6	PI4K2A	Phosphatidylinositol 4-kinase type 2-alpha	2	VAAAAGS(0.143)GPS(0.857)PPGS(0.999)PGHDR	80.459	0.011141	11752000.0	2659.0	1831.6	2629.8	2449.7	2696.5	2034.8	2285.8	2466.3	2727.5	2949.1	True	False	2542.1135437967023	2134.240768123189	2077.8409183433755	2234.9386044046114	3051.1370140608487	2427.996301929504	2798.4488365384473	2379.558831087853	2600.699120327358	2414.989412636716	1.0526396225568502	0.8837474636350466	0.8603933861866344	0.9254444730523588	1.2634163106866703	1.005385899095345	1.1587830662508227	0.9853288874214237	1.0768987668098642	1.0	11.23780114893225	-7.5874391972470265	24.999999279508984	1.0821731612823862	0.9216568089588631	0.3959102835617988	0.09117034873405905	56.40407694322374	21840.905770846213	0.02593374277360218	0.03348032170597265	2.5855968068584056e-08	7.5874391972470265	-0.16051635232352301	
VAAAAGSGPS(ph)PPGS(ph)PGHDRER	ddPTM_K562_Methotrexat_30min_R1	5	VAAAAGSGPSPPGSPGHDRER	21	1	Q9BTU6	Q9BTU6	PI4K2A	Phosphatidylinositol 4-kinase type 2-alpha	2	VAAAAGS(0.005)GPS(0.996)PPGS(0.999)PGHDRER;VAAAAGS(0.031)GPS(0.969)PPGS(1)PGHDRER;VAAAAGS(0.007)GPS(0.993)PPGS(1)PGHDRER;VAAAAGS(0.041)GPS(0.959)PPGS(1)PGHDRER;VAAAAGS(0.005)GPS(0.995)PPGS(1)PGHDRER	126.71	1.2552000000000001e-05	164667400.0	10515.58	8301.1	12104.2	11530.6	9035.2	9412.61	8994.04	10753.9	10818.06	12299.1	True	False	10053.327694199967	9672.715680425537	9563.693833680092	10519.730200411404	10223.487168345102	11231.463667930348	11011.18241918814	10375.679241631455	10315.130751841816	10071.61380928427	0.9981843907609477	0.9603938220416058	0.9495691569174382	1.044493007735667	1.0150793469583623	1.1151602792371664	1.0932887844684585	1.030190338718795	1.0241785425025993	1.0	13.298007249399696	-7.30631351278397	6.89347180408847	1.0511251597455378	0.9685327002228491	0.4972395005396635	0.03507371025599157	0.1859421648285988	23.62816694869396	0.010454177035124312	0.015728018777561827	4.9395397788064437e-08	7.30631351278397	-0.08259245952268868	
VAAAAGSGPS(ph)PPGSPGHDR	ddPTM_K562_Methotrexat_30min_R1	2	VAAAAGSGPSPPGSPGHDR	19	0	Q9BTU6	Q9BTU6	PI4K2A	Phosphatidylinositol 4-kinase type 2-alpha	1	VAAAAGSGPS(0.998)PPGS(0.002)PGHDR;VAAAAGS(0.001)GPS(0.925)PPGS(0.074)PGHDR	89.756	0.0021218000000000005	32038000.0	4732.3	3526.0	5059.1	4721.4	4352.3	3867.3	3594.7	4421.1	4557.799999999999	5299.200000000001	True	False	4524.273758296026	4108.611568247633	3997.2640466921343	4307.482192446399	4924.703736805871	4614.600991965778	4400.902980446564	4265.607407096668	4345.908872824208	4339.46352970211	1.0425882663442048	0.9468017279384017	0.9211424452198436	0.992630117285971	1.134864644695824	1.0634035659893093	1.0141583055886798	0.9829803564196536	1.0014852856990228	1.0	12.083300983811718	-5.9172613141178845	19.63389521291137	1.0079696608648756	2.5007725778553316	0.03547306684586671	0.05608864861060835	1682.2643250425347	400506.51325905847	0.01529883870799984	362.18007007408033	1.209869938182701e-06	5.9172613141178845	1.492802916990456	
VAAAAGSGPS(ph)PPGSPGHDRER	ddPTM_K562_Methotrexat_30min_R1	1	VAAAAGSGPSPPGSPGHDRER	21	1	Q9BTU6	Q9BTU6	PI4K2A	Phosphatidylinositol 4-kinase type 2-alpha	1	VAAAAGS(0.067)GPS(0.933)PPGSPGHDRER	88.0	0.0009551000000000001	18762000.0	2894.2	2825.0	3860.0	3604.0	2868.4	2118.0	2339.6	3042.8	3317.4	3410.1	True	False	2766.9744334172283	3291.7832332103144	3049.8387500210792	3288.0429155709753	3245.6448771118644	2527.273524418463	2864.3148560527384	2935.782999324542	3163.1747980839486	2792.4978454553816	0.9908600065422821	1.1787952633759375	1.0921543789136683	1.1774558468942287	1.1622730103065082	0.9050225512372175	1.0257178392148931	1.0513107482257678	1.1327402824076735	1.0	11.447340452263413	-8.217540414233838	24.999567802866604	1.0263374696579943	1.1251678423640514	0.3054603532833261	0.07312442744474436	586.92741888647	334243.55859059695	0.024178786071851796	0.02417862877554488	6.059818069254858e-09	8.217540414233838	0.0988303727060571	
VAAAAGSGPSPPGS(ph)PGHDRER	ddPTM_K562_Methotrexat_30min_R1	2	VAAAAGSGPSPPGSPGHDRER	21	1	Q9BTU6	Q9BTU6	PI4K2A	Phosphatidylinositol 4-kinase type 2-alpha	1	VAAAAGS(0.002)GPS(0.001)PPGS(0.997)PGHDRER;VAAAAGSGPSPPGS(1)PGHDRER	85.046	0.0012211	34415000.0	1500.5	1039.21	1815.3200000000002	1910.19	1312.99	1364.56	1507.85	1259.28	1551.49	1723.81	True	False	1434.5398166479697	1210.9217889502622	1434.3091398156118	1742.7266084612995	1485.6711989956432	1628.241907686712	1846.023745810875	1214.990408633301	1479.361568541409	1411.611304939575	1.0162427940525571	0.8578294780673329	1.016079380206585	1.2345654943135342	1.0524647923949848	1.153463352120441	1.3077422512494652	0.8607117301921223	1.0479949851384438	1.0	10.463127173813412	-7.001010536234678	24.793139879195156	1.099840571204885	0.9370156618561543	0.2103462636417568	0.12201634224988195	50.05848863155604	1228320.8282147972	0.03246953286831336	0.0662230101065639	9.976758593370346e-08	7.001010536234678	-0.16282490934873084	
VADAKGDS(ph)ES(ph)EEDEDLEVPVPSR	ddPTM_K562_Methotrexat_30min_R1	1	VADAKGDSESEEDEDLEVPVPSR	23	1	P13861-2;P13861	P13861-2	PRKAR2A	cAMP-dependent protein kinase type II-alpha regulatory subunit	2	VADAKGDS(1)ES(1)EEDEDLEVPVPSR	78.3	0.0040043	56314000.0	3785.5	2843.4	6081.6	4230.9	2815.0	2385.5	2596.7	3487.7	4252.2	5099.4	True	False	3619.093952629715	3313.2235204637886	4805.155269981397	3859.983565896018	3185.221841120447	2846.464113550632	3179.076075701893	3365.0356141528214	4054.51615012135	4175.849245803694	0.866672559184587	0.793425079651341	1.15070132735517	0.9243589360355646	0.7627722299413161	0.6816491558959031	0.7613004896899817	0.8058326381236922	0.9709440910003464	1.0	12.027853914132804	-7.687699057189726	7.178758135594007	0.8100158022704198	0.9405636264149401	0.13002012223179216	0.12429733193446685	0.3950440809620701	32.030567621349945	0.037966284142040646	0.04895584946882055	2.0525840169041472e-08	7.687699057189726	0.13054782414452026	
VADNS(ph)FDAK	ddPTM_K562_Methotrexat_30min_R1	3	VADNSFDAK	9	0	A0A0A0MRM9;Q14978;Q14978-3;Q14978-2	A0A0A0MRM9	NOLC1	Nucleolar and coiled-body phosphoprotein 1	1	VADNS(1)FDAK;VADNS(1)FDAK;VADNS(1)FDAK	105.66	0.006219	225353000.0	10199.1	7724.9	14707.2	11967.099999999999	7120.2	6479.0	6743.0	9029.0	8162.900000000001	12216.0	True	False	9750.759776057514	9001.308424150913	11620.359705779798	10917.962923121371	8056.6311023608605	7730.975054158273	8255.289397488294	8711.444952314077	7783.408560704011	10003.564024539737	0.974728581947187	0.8998101478702799	1.1616219656588291	1.0914073120678314	0.8053760722275725	0.7728220697336892	0.8252348240324396	0.8708341278112518	0.7780635523110099	1.0	13.288226467996607	-7.767348774310583	24.999925193346854	0.8312941248696518	1.031724017247643	0.5235708253471844	0.08835800779900493	111.56937986582734	471997.86891448515	0.027770767768543723	0.032322670702007554	1.7086425829498745e-08	7.767348774310583	0.20042989237799114	
VADNS(ph)FDAKR	ddPTM_K562_Methotrexat_30min_R1	2	VADNSFDAKR	10	1	A0A0A0MRM9;Q14978;Q14978-3;Q14978-2	A0A0A0MRM9	NOLC1	Nucleolar and coiled-body phosphoprotein 1	1	VADNS(1)FDAKR;VADNS(1)FDAKR	131.79	0.00085792	358990000.0	8092.6	6434.6	11716.3	9251.400000000001	5634.799999999999	5560.4	5001.1	6949.6	7524.1	9983.7	True	False	7736.8589938056375	7497.808280500917	9257.208742712943	8440.344125725123	6375.874966374953	6634.868604899157	6122.723981281138	6705.178628929223	7174.3062332740865	8175.555185969002	0.9463405013868341	0.9171008096635146	1.1323033766074124	1.032387884826532	0.7798705802044265	0.8115496078218648	0.7489062017205925	0.8201496383311975	0.877531381059812	1.0	12.99710098919913	-7.757278213658019	24.999191300594006	0.8247313766106966	1.009557306916177	0.4862191524223002	0.08342425157435575	85.02470061473986	510802.72268513025	0.025206083123664548	0.03137179356475466	1.748726077225821e-08	7.757278213658019	0.18482593030548033	
VADPDHDHTGFLTEY(ph)VATR	ddPTM_K562_Methotrexat_30min_R1	4	VADPDHDHTGFLTEYVATR	19	0	P28482-2;P28482	P28482-2	MAPK1	Mitogen-activated protein kinase 1	1	VADPDHDHTGFLTEY(1)VATR;VADPDHDHTGFLTEY(1)VATR;VADPDHDHTGFLT(0.001)EY(0.999)VATR;VADPDHDHT(0.006)GFLT(0.238)EY(0.754)VAT(0.002)R	228.84	1.2497999999999998e-45	649591000.0	17518.7	15700.3	26073.199999999997	11339.099999999999	14986.5	13672.199999999999	11806.599999999999	20654.1	13423.7	22834.399999999998	True	False	16748.598924299098	18294.507715529857	20600.79163135999	10345.01870808847	16957.48743230962	16314.159150403268	14454.530594747937	19927.68359614467	12799.635116970976	18698.868890139995	0.8957011797184543	0.9783750997460943	1.101713250806464	0.5532430206804353	0.9068723638813996	0.8724677009209795	0.773016308081067	1.0657159913374565	0.6845138704470133	1.0	14.190663382499762														
VADPDHDHTGFLTEYVATR	ddPTM_K562_Methotrexat_30min_R1	2	VADPDHDHTGFLTEYVATR	19	0	P28482-2;P28482	P28482-2	MAPK1	Mitogen-activated protein kinase 1	0	;	106.31	0.00028681	52578000.0	7986.900000000001	6958.3	8559.9	9040.5	6817.5	6248.6	6505.1	8022.7	8095.7	8653.0	False	True	7635.805439244031	8108.040804122948	6763.29396795477	8247.933401281753	7714.120746656716	7456.053514958078	7964.034266587744	7740.53709369035	7719.332674036366	7085.857850715646	1.077611998450243	1.1442567681913158	0.9544777937186112	1.1639992750417285	1.0886643380628385	1.052244297309047	1.1239336766801504	1.0923923760210041	1.089399877427225	1.0	12.79072680852579	-12.655243375804334	3.682205129445427	0.9952858897644947	1.0876738155224348	0.1893159051263864	0.05428248356566683	0.0020877596433596488	0.00019547222764654758	0.05223378635564723	0.012040583480740458	2.2118548531537772e-13	12.655243375804334	0.09238792575794008	
VAEFHTELER	ddPTM_K562_Methotrexat_30min_R1	1	VAEFHTELER	10	0	K7ERW6;K7EJC1;K7EJR3;R4GMR5;P48556	K7ERW6	PSMD8	26S proteasome non-ATPase regulatory subunit 8	0		138.22	0.00016189	8269800.0	4375.9	4099.6	5207.4	4636.4	4891.0	3742.1	4215.0	4641.6	4559.3	5862.3	False	True	4183.540675554712	4776.989218714692	4114.437903331543	4229.93401047538	5534.252229101283	4465.207863893449	5160.321045589971	4478.352297116077	4347.339138151611	4800.580663151545	0.8714655515877217	0.9950857102312773	0.8570708820525151	0.8811296606145266	1.1528297548630477	0.9301391179962121	1.0749368477858798	0.9328772103531477	0.9055861036813858	1.0	12.228993204909035														
VAEKLDEIYVAGLVAHSDLDER	ddPTM_K562_Methotrexat_30min_R1	1	VAEKLDEIYVAGLVAHSDLDER	22	1	O60506-4;O60506-3;O60506-2;O60506;F6UXX1	O60506-4	SYNCRIP	Heterogeneous nuclear ribonucleoprotein Q	0		95.227	0.00043092	6695300.0	5546.4	3215.7	6701.2	5969.7	4153.1	3398.1	3626.6	5364.9	5625.9	7561.5	False	True	5302.586897071839	3747.0397674458054	5294.709697316385	5446.345669557179	4699.305445242394	4054.734732448715	4439.957367481991	5176.213426145732	5364.353136956802	6192.039077566899	0.8563555285499649	0.6051382622924544	0.8550833789952258	0.8795722380513894	0.7589269683822699	0.6548302879965	0.71704285322867	0.8359465050694858	0.866330633537389	1.0	12.596198860930276	-9.955740750744834	1.636819305838401	0.9960131402085051	0.760718724643718	0.4262956586959825	0.08494147080049042	0.36466040884656636	2.2045273200670277	0.08351261113332392	0.02436573936148484	1.1072845730268393e-10	9.955740750744834	-0.23529441556478703	
VAELALSLSS(ph)TSDDEPPSSVSHGAK	ddPTM_K562_Methotrexat_30min_R1	2	VAELALSLSSTSDDEPPSSVSHGAK	25	0	Q5T7F5;Q8N1G2	Q5T7F5	CMTR1	Cap-specific mRNA (nucleoside-2-O-)-methyltransferase 1	1	VAELALS(0.003)LS(0.043)S(0.604)T(0.175)S(0.175)DDEPPSSVSHGAK;VAELALS(0.001)LS(0.056)S(0.448)T(0.448)S(0.046)DDEPPSSVSHGAK	152.14	1.6698e-27	33399000.0	3869.8999999999996	3042.9	5241.2	4723.1	3032.2	3518.2	2728.7	3419.7	3736.1000000000004	4875.9	True	False	3699.7838296874215	3545.6875045435986	4141.143745235875	4309.033156085815	3430.9874481866514	4198.042357700205	3340.6804358484815	3299.427212695586	3562.4095264729767	3992.827261562973	0.9266075357938622	0.888014249621121	1.037145730069686	1.0791934821640805	0.8592877235674873	1.0513959364365042	0.8366704134705762	0.8263385807990205	0.892202264988165	1.0	11.9631949438414	-8.777174656245558	24.99975187262011	0.8743310245668725	0.9722079743303842	0.20488726706277227	0.0798036378800419	350.45412145274105	556786.157585079	0.03324620423306582	0.022498434165987898	1.670418702177158e-09	8.777174656245558	0.09787694976351169	
VAELALSLSSTS(ph)DDEPPSSVSHGAK	ddPTM_K562_Methotrexat_30min_R1	1	VAELALSLSSTSDDEPPSSVSHGAK	25	0	Q5T7F5;Q8N1G2	Q5T7F5	CMTR1	Cap-specific mRNA (nucleoside-2-O-)-methyltransferase 1	1	VAELALSLS(0.001)S(0.017)T(0.053)S(0.928)DDEPPSSVSHGAK	154.11	1.6087e-27	20222000.0	3236.8	2330.1	4394.3	3342.8	1880.8	1895.5	2023.2	2783.8	2709.2	3738.0	True	False	3094.514147634886	2715.1094200719835	3471.996481662599	3049.7419140318148	2128.158166529072	2261.7785484113288	2476.954101883188	2685.8921761271386	2583.2498833330437	3061.0119780394193	1.010944801861548	0.8869973196939313	1.1342642585431553	0.9963181901644099	0.6952465987709591	0.7388989538877923	0.8091945146420756	0.8774523573891582	0.843920213924683	1.0	11.579792974944914	-7.673163032169177	8.916754149494555	0.8161783800388851	1.0088945968060152	0.4614720236414268	0.09466501003470586	0.24846387350728683	22.63427409983704	0.028172082249303208	0.03636501471492289	2.1224475552929596e-08	7.673163032169177	0.19271621676713013	
VAEPGAEATS(ph)S(ph)TGEESGSEHPPAVPMHNKR	ddPTM_K562_Methotrexat_30min_R1	1	VAEPGAEATSSTGEESGSEHPPAVPMHNKR	30	1	Q14684-2;Q14684	Q14684-2	RRP1B	Ribosomal RNA processing protein 1 homolog B	2	VAEPGAEAT(0.176)S(0.692)S(0.429)T(0.429)GEES(0.138)GS(0.138)EHPPAVPMHNKR	55.063	0.0011417	29255000.0	1340.7	944.84	1547.2	1279.4	773.2	829.07	650.5	782.83	1019.0	1408.9	True	False	1281.7644333088517	1100.958750465994	1222.4638637390194	1167.2369883966455	874.8893525947889	989.2760438572303	796.3911839042177	755.2974251877325	971.6269124156101	1153.7345574798658	1.1109699583833608	0.9542565430915483	1.0595711602929543	1.011703238694933	0.7583107803460736	0.8574555017387476	0.6902724536948922	0.6546544179430228	0.8421581083069589	1.0	10.17209562246049	-7.737298366738332	6.951829955839378	0.7803517227467887	1.0315541082925845	0.5731660794896904	0.09787599878718806	0.11526614375646638	20.53845676546114	0.028506144826737103	0.03592847322096119	1.8310560275550197e-08	7.737298366738332	0.2512023855457959	
VAEPGAEATSST(ph)GEES(ph)GSEHPPAVPMHNKR	ddPTM_K562_Methotrexat_30min_R1	1	VAEPGAEATSSTGEESGSEHPPAVPMHNKR	30	1	Q14684-2;Q14684	Q14684-2	RRP1B	Ribosomal RNA processing protein 1 homolog B	2	VAEPGAEAT(0.1)S(0.341)S(0.341)T(0.356)GEES(0.463)GS(0.4)EHPPAVPMHNKR	48.106	0.0038942	28205000.0	1559.0	1095.4	1916.7	1782.1	1005.0	1066.1	925.31	1370.6	1386.0	1436.8	True	False	1490.4682266938921	1276.3962313835664	1514.4108632552843	1625.8660598887452	1137.1751155687573	1272.1087367245152	1132.8343218730377	1322.3952211365247	1321.565162520153	1176.5815971233378	1.2667784625715597	1.084834434351403	1.2871277835365742	1.3818557623745582	0.9665076509347701	1.0811904077326508	0.9628183244092383	1.1239298866901295	1.1232244034338887	1.0	10.20038566105354	-7.77153899088778	24.998318234512865	1.0470475289772716	1.2452679798132287	0.5883084216200425	0.08676660304927293	161.5033377202502	399748.06321955466	0.02785688482807174	0.03194822629194463	1.6922363089162252e-08	7.77153899088778	0.19822045083595707	
VAEPGAEATSSTGEES(ph)GSEHPPAVPMHNKR	ddPTM_K562_Methotrexat_30min_R1	5	VAEPGAEATSSTGEESGSEHPPAVPMHNKR	30	1	Q14684-2;Q14684	Q14684-2	RRP1B	Ribosomal RNA processing protein 1 homolog B	1	VAEPGAEAT(0.003)S(0.01)S(0.01)T(0.011)GEES(0.482)GS(0.482)EHPPAVPMHNKR;VAEPGAEAT(0.008)S(0.087)S(0.103)T(0.103)GEES(0.554)GS(0.144)EHPPAVPMHNKR;VAEPGAEAT(0.008)S(0.047)S(0.047)T(0.188)GEES(0.559)GS(0.15)EHPPAVPMHNKR;VAEPGAEAT(0.017)S(0.052)S(0.03)T(0.008)GEES(0.447)GS(0.447)EHPPAVPMHNKR;VAEPGAEAT(0.074)S(0.066)S(0.074)T(0.083)GEES(0.352)GS(0.352)EHPPAVPMHNKR	74.819	1.4353e-05	286613000.0	9727.3	7363.6	13057.699999999999	11469.5	6453.9	6124.4	6621.77	7617.300000000001	8853.800000000001	10269.599999999999	True	False	9299.69953914015	8580.309740200872	10317.06721402856	10463.986742547539	7302.700973501694	7307.853622732967	8106.870483999121	7349.395241473261	8442.188770505722	8409.675925541365	1.1058332831703608	1.0202901771923538	1.2268091309790168	1.24427942707839	0.8683688929465601	0.8689815977971268	0.9639932092243195	0.8739213385324537	1.003866123409775	1.0	13.037834490657039	-7.768503740823711	24.99998963346914	0.9222144637052233	1.1456239606930025	0.6722794312650986	0.07492944386321303	99.66921040270807	352717.506944959	0.02415802534404453	0.027975917595048565	1.70410464083638e-08	7.768503740823711	0.22340949698777923	
VAESAQS(ph)PAAAHTTDTAGYNAMEESVSR	ddPTM_K562_Methotrexat_30min_R1	1	VAESAQSPAAAHTTDTAGYNAMEESVSR	28	0	P38398-8;P38398-4;P38398;P38398-7;K7EPC7;H0Y8B8;B7ZA85;E7EUM2;A0A2R8Y7V5;P38398-6;P38398-5;P38398-3	P38398-8	BRCA1	Breast cancer type 1 susceptibility protein	1	VAES(0.092)AQS(0.878)PAAAHT(0.029)T(0.001)DTAGYNAMEESVSR	89.99	2.5609e-05	10409000.0	657.12	621.75	1015.9	720.63	518.31	770.93	673.78	632.99	586.64	786.09	True	False	628.2337916132714	724.4836195569953	802.6764730949262	657.4534867502533	586.4768499009374	919.9013116996811	824.8923165118885	610.727382917853	559.3672344450375	643.7214836321583	0.9759403835157114	1.125461302719216	1.2469313103640325	1.0213322119383264	0.9110723578647374	1.4290362137817667	1.281442887159032	0.9487447575492771	0.8689584683252185	1.0	9.330292808090059	-9.38592551193579	7.445671303355101	0.9267181242813041	1.1423191520394163	0.2832841892395661	0.14743898484156964	0.36125147246639716	20.22757372202612	0.08629012336748386	0.04103520657222927	4.112202455404547e-10	9.38592551193579	0.21560102775811218	
VAESAQSPAAAHTT(ph)DTAGYNAMEESVSR	ddPTM_K562_Methotrexat_30min_R1	1	VAESAQSPAAAHTTDTAGYNAMEESVSR	28	0	P38398-8;P38398-4;P38398;P38398-7;K7EPC7;H0Y8B8;B7ZA85;E7EUM2;A0A2R8Y7V5;P38398-6;P38398-5;P38398-3	P38398-8	BRCA1	Breast cancer type 1 susceptibility protein	1	VAES(0.016)AQS(0.11)PAAAHT(0.347)T(0.402)DT(0.085)AGY(0.022)NAMEES(0.003)VS(0.015)R	67.181	0.002816	20995000.0	1437.5	1309.4	1995.8	1894.2	1205.8	1539.6	1248.6	1515.5	1604.0	1779.1	True	False	1374.3092212138988	1525.756094005516	1576.9088542207433	1728.1384269352227	1364.3838351769225	1837.1059103846383	1528.6303339320618	1462.199006006422	1529.430390102687	1456.8877501685197	0.9433185371041325	1.047270864779411	1.08238184722079	1.1861850212793177	0.9365058049387146	1.2609797221317416	1.049243727771919	1.0036456177473438	1.0497928820705482	1.0	10.508674010030404	-8.998030198343715	24.999611193695795	1.0213204597246233	1.0805204992144686	0.07221364271222153	0.09272635904425651	173.44084288328816	2201199.269561198	0.038529571140924326	0.025773194847341932	1.00454593749539e-09	8.998030198343715	0.05920003948984531	
VAFEDYIS(ph)NATHMLSR	ddPTM_K562_Methotrexat_30min_R1	1	VAFEDYISNATHMLSR	16	0	E7EWP2;O75962-5;O75962-2;O75962-4;O75962;F5H228	E7EWP2	TRIO	Triple functional domain protein	1	VAFEDYIS(1)NATHMLSR	88.10799999999999	0.02301	0.0	0.0	0.0	0.0	91.71799999999999	0.0	0.0	0.0	0.0	0.0	65.483	True	False	0.0	0.0	0.0	83.67722534138149	0.0	0.0	0.0	0.0	0.0	53.62339415675635	0.0	0.0	0.0	1.560461187830992	0.0	0.0	0.0	0.0	0.0	1.0	5.744790634203078	-12.717974291550796	2.6081427336734198	1.1499194258806105	0.18358366620061753	0.2209174699387233	0.4653402476308972	57620370.31507526	45876721.45396269	56397016.45391491	0.12547083701830467	1.9143692444618848e-13	12.717974291550796	-0.966335759679993	
VAFISLS(ph)PVR	ddPTM_K562_Methotrexat_30min_R1	2	VAFISLSPVR	10	0	Q6ZU65;Q6ZU65-2	Q6ZU65	UBN2	Ubinuclein-2	1	VAFIS(0.27)LS(0.73)PVR;VAFISLS(1)PVR	147.28	2.4476e-07	24647000.0	3997.5	2526.15	3194.5	3698.1000000000004	2578.2	2714.3	2701.83	4357.2	4232.1	4969.2	True	False	3821.7746864713476	2943.5533502917638	2524.0181054254763	3373.8933146706518	2917.2784905068343	3238.800060117579	3307.7841543550057	4203.954806315532	4035.3505947341555	4069.2297274674893	0.939188726719996	0.7233686833708705	0.6202692584270278	0.8291233330712974	0.7169117218462917	0.7959246041715287	0.8128772214621626	1.0331082509150669	0.9916743130758512	1.0	11.990540014403427	-9.160905081151519	3.3974604321017186	1.0110825380894573	0.7639025817266153	0.6450249529608172	0.07885629425276341	0.15495139156691168	3.3430520510859774	0.042403627919348	0.022341290021561107	6.903906782589575e-10	9.160905081151519	-0.24717995636284196	
VAFISLS(ph)PVRR	ddPTM_K562_Methotrexat_30min_R1	1	VAFISLSPVRR	11	1	Q6ZU65;Q6ZU65-2	Q6ZU65	UBN2	Ubinuclein-2	1	VAFIS(0.005)LS(0.995)PVRR	92.85600000000001	0.0095173	10682000.0	3891.2	3340.1	4081.6	3497.1	3403.6	2719.7	2721.2	3609.0	3622.5	4100.6	True	False	3720.147507191323	3891.994753007351	3224.927938364256	3190.5146725980217	3851.2330580595226	3245.243533692585	3331.498369931063	3482.069424399325	3454.0907656776717	3357.941604373579	1.107865456131216	1.1590418213164249	0.9603883325915857	0.9501400109050464	1.146902927985243	0.9664383470712505	0.9921251654858813	1.0369654492693008	1.02863336312307	1.0	11.713361426249364	-6.753860083716661	24.999527908771466	1.0120483087313399	1.133453676324227	0.45133587979671275	0.05432768920686786	153.99478022894385	507923.7832223495	0.013948928955840111	0.03541771534230324	1.7625437921839742e-07	6.753860083716661	0.12140536759288723	
VAGEAAET(ph)DS(ph)EPEPEPEPTAAPR	ddPTM_K562_Methotrexat_30min_R1	1	VAGEAAETDSEPEPEPEPTAAPR	23	0	Q6QNY0	Q6QNY0	BLOC1S3	Biogenesis of lysosome-related organelles complex 1 subunit 3	2	VAGEAAET(1)DS(1)EPEPEPEPTAAPR	91.20200000000001	0.00026788	9988200.0	1667.4	1733.2	2241.0	2318.2	1454.8	1325.6	1349.9	1854.8	1655.6	2275.0	True	False	1594.1030924883864	2019.5818406372077	1770.6447250770048	2114.96700523769	1646.1316996312705	1581.7534390789006	1652.6494375900118	1789.565632689352	1578.6315173653418	1862.9754547992725	0.8556758428468636	1.084062506263567	0.9504391056337261	1.1352629471253923	0.8836035361553564	0.8490468486871866	0.8871020996720955	0.9605953895308674	0.84737107689668	1.0	10.863392951173177														
VAGPADAPMDS(ph)GAEEEKAGAATVK	ddPTM_K562_Methotrexat_30min_R1	1	VAGPADAPMDSGAEEEKAGAATVK	24	1	Q8TEK3;Q8TEK3-1	Q8TEK3	DOT1L	Histone-lysine N-methyltransferase, H3 lysine-79 specific	1	VAGPADAPMDS(1)GAEEEKAGAATVK	82.406	0.0026193	0.0	2038.4	1212.5	3910.5	2478.4	1154.8	1155.8	1204.8	1903.7	1731.3	2773.1	True	False	1948.794376711244	1412.8450160238951	3089.739490144411	2261.122519964238	1306.676441252537	1379.141992220424	1475.0070689743295	1836.7457919725682	1650.812240888269	2270.864718111586	0.8581728190007855	0.6221616835012497	1.3606004204045177	0.9957099169890448	0.5754091958146884	0.6073201900671987	0.6495354202345093	0.8088310049133952	0.7269531415596863	1.0	11.14902604780823	-7.746874086975668	24.993994198182328	0.7084916700536213	0.9637641122130483	0.2335107635883249	0.20326085967635527	341.62413187749763	586223.515615533	0.061879675254788116	0.0795251337472032	1.7911250715119303e-08	7.746874086975668	0.2552724421594269	
VAIPASVLPGPEEPGGQRQEASTGQSPEDHASLAPPLS(ph)PDHSSLEAK	ddPTM_K562_Methotrexat_30min_R1	1	VAIPASVLPGPEEPGGQRQEASTGQSPEDHASLAPPLSPDHSSLEAK	47	1	P48681	P48681	NES	Nestin	1	VAIPASVLPGPEEPGGQRQEAS(0.019)T(0.019)GQS(0.019)PEDHAS(0.019)LAPPLS(0.91)PDHS(0.01)S(0.005)LEAK	51.23	1.3977999999999999e-05	18144000.0	2681.5	1728.8	3440.9	2823.0	2038.0	1808.2	1521.6	2554.0	2121.0	3377.1	True	False	2563.624470737442	2014.4548154244205	2718.7021126807076	2575.5119729902513	2306.032721919529	2157.6090589487562	1862.8575333261435	2464.1743723790187	2022.3951729475068	2765.474465231922	0.9270107184021488	0.7284300906591382	0.9830870423360457	0.9313092582737915	0.8338651290805311	0.7801948946101775	0.6736122704246044	0.8910494034058509	0.7313013366687883	1.0	11.433311305778174	-7.970799183542252	6.610444155156025	0.8002563511388958	0.8870720165009668	0.10231940143567719	0.10357815945909825	0.3653983704944355	52.39037343303377	0.03160885360323188	0.03544701136720243	1.069549321277891e-08	7.970799183542252	0.08681566536207097	
VALVNDSLS(ph)DVTSTTSSR	ddPTM_K562_Methotrexat_30min_R1	1	VALVNDSLSDVTSTTSSR	18	0	Q7Z2W4-2;Q7Z2W4	Q7Z2W4-2	ZC3HAV1	Zinc finger CCCH-type antiviral protein 1	1	VALVNDS(0.008)LS(0.992)DVTSTTSSR	115.73	0.00047771	9603700.0	949.8	667.62	1020.4	888.23	693.33	813.62	670.56	837.24	1273.6	1021.3	True	False	908.0479292584081	777.9328574003076	806.231984591064	810.3602549660399	784.5150476390909	970.8405500176342	820.9501495446764	807.7937946478509	1214.390613986772	836.3326734006579	1.0857496761021483	0.9301715479285443	0.9640087135574893	0.9689448717470165	0.9380418493625646	1.160830589184142	0.9816071709916178	0.9658761642818957	1.452042533563674	1.0	9.707933116287888	-9.717732207644199	24.999997615917184	1.2260237804297935	0.9976430708758339	0.35709395921959497	0.1216101251470602	115.42962095744785	66024.48609067273	0.07609771841594497	0.028761844689889196	1.9154366473260935e-10	9.717732207644199	-0.22838070955395962	
VAPGPSSGSTPGQVPGS(ph)SALSSPRR	ddPTM_K562_Methotrexat_30min_R1	1	VAPGPSSGSTPGQVPGSSALSSPRR	25	1	A0A0A0MRJ3;Q8NEY1-5;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1	A0A0A0MRJ3	NAV1	Neuron navigator 1	1	VAPGPSSGSTPGQVPGS(0.517)S(0.149)ALS(0.167)S(0.167)PRR	98.632	1.2862e-06	29288000.0	523.74	434.74	600.63	684.19	424.09	392.97	434.36	704.41	591.76	660.45	True	False	500.7170167085687	506.5733956834869	474.56597109460125	624.2081249735036	479.8652684194569	468.90589088324987	531.7762869187329	679.6355010366109	564.2492067625724	540.8361051086498	0.9258202475368734	0.9366486277422625	0.8774672523005183	1.154153946227582	0.8872655946722634	0.8670018263463574	0.9832484959780989	1.2566385539295262	1.0432905670179307	1.0	9.079047655970442	-9.021502584498071	24.189207143553187	1.113967490396551	0.9437857540342911	0.3404309753654787	0.09821189676265522	534.9938677319203	601835.298865462	0.0449291433502273	0.026295590026405177	9.516941845385591e-10	9.021502584498071	-0.17018173636225997	
VAPGPSSGSTPGQVPGSSALSS(ph)PRR	ddPTM_K562_Methotrexat_30min_R1	1	VAPGPSSGSTPGQVPGSSALSSPRR	25	1	A0A0A0MRJ3;Q8NEY1-5;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1	A0A0A0MRJ3	NAV1	Neuron navigator 1	1	VAPGPSSGSTPGQVPGS(0.047)S(0.196)ALS(0.196)S(0.56)PRR	113.79	2.5213000000000002e-08	16853000.0	730.03	555.73	989.69	849.67	643.14	577.33	723.22	735.25	677.83	661.73	True	False	697.9387553132403	647.5549367051211	781.9675939140835	775.180750297778	727.7241829123287	688.8908516772951	885.420495039521	709.3908407563331	646.3178312489433	541.8842847051966	1.2879848613674831	1.1950059357366545	1.4430527254347307	1.4305281997973103	1.3429512599876103	1.2712877474423807	1.6339659961189312	1.3091186823073597	1.192722965938313	1.0	9.081840997617178	-9.969962297545363	2.462929206096843	1.0042615171581042	1.3698847678659192	0.510522756646854	0.1135308795657503	0.22418877447680866	3.102166105013177	0.11215220746099626	0.030682349978099138	1.0716123311988143e-10	9.969962297545363	0.365623250707815	
VAPVINNGS(ph)PTILGK	ddPTM_K562_Methotrexat_30min_R1	1	VAPVINNGSPTILGK	15	0	H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9	H0Y4T7	MTA1	Metastasis-associated protein MTA1	1	VAPVINNGS(0.948)PT(0.052)ILGK	141.34	4.849e-06	43623000.0	3532.6	2464.6	5206.7	3596.3	2982.6	2663.1	2333.2	3823.9	3393.1	4102.4	True	False	3377.311133815807	2871.8332589628812	4113.884823765479	3281.017962615957	3374.8641788013683	3177.706384739759	2856.47949313654	3689.411269592847	3235.355521606876	3359.415606931221	1.005326976170398	0.8548609624357435	1.2245834707910568	0.9766633088941087	1.0045985890636078	0.94591046674411	0.8502905943649806	1.0982300796545599	0.9630709326144757	1.0	11.713994572931133	-7.457827216093985	24.999998961478177	0.9755416891074086	1.025868290311184	0.05093922779040194	0.10117781170461654	726.7628965098327	279300.9054181295	0.028670337123783342	0.04252495208157641	3.48475928485419e-08	7.457827216093985	0.05032660120377541	
VAPVINNGS(ph)PTILGKR	ddPTM_K562_Methotrexat_30min_R1	1	VAPVINNGSPTILGKR	16	1	H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9	H0Y4T7	MTA1	Metastasis-associated protein MTA1	1	VAPVINNGS(0.786)PT(0.214)ILGKR	112.82	0.00069754	99543000.0	3127.7	2570.3	4794.3	4199.6	2345.0	2131.4	2390.1	3070.8	3118.7	4067.1	True	False	2990.210053002234	2994.998387370076	3788.041947986025	3831.427588299634	2653.4086029937666	2543.2628847712504	2926.140766563365	2962.7982234539927	2973.712317713996	3330.5087789952186	0.8978238015347164	0.8992615201193487	1.137376358794298	1.1504030893008297	0.7966976756609162	0.7636259363167112	0.8785867147439715	0.8895932784022985	0.8928702835039923	1.0	11.70152686942571	-7.776701041765769	24.99990401485458	0.8597963751796216	1.0208023295815332	0.361448053488698	0.09772609233347276	269.49552979681977	441454.78805353184	0.03268949268226905	0.03720599279707445	1.672241350300651e-08	7.776701041765769	0.16100595440191157	
VAPVINNGSPT(ph)ILGKR	ddPTM_K562_Methotrexat_30min_R1	1	VAPVINNGSPTILGKR	16	1	H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9	H0Y4T7	MTA1	Metastasis-associated protein MTA1	1	VAPVINNGS(0.091)PT(0.909)ILGKR	107.69	0.00105	111280000.0	2315.9	1875.8	3459.0	2824.6	1865.0	1587.2	1821.8	1743.3	2174.0	2728.9	True	False	2214.0958089803607	2185.7440668516474	2733.0031700318405	2576.9717034744135	2110.2801895877933	1893.9039367124572	2230.3850251140707	1681.987150888153	2072.9312145157364	2234.6697664183453	0.9907932895736269	0.9781060717328653	1.2230009154382606	1.15317786198213	0.9443364837615719	0.8475095359382535	0.998082606491275	0.7526781702443608	0.9276230634462657	1.0	11.125845934168503	-7.903904638461139	5.409615290962872	0.895581482111688	1.087291059066984	0.4518504204343954	0.09455552824164967	0.1893676789921976	8.664435356835815	0.030554725935777606	0.034819410992641964	1.2476574423655673e-08	7.903904638461139	0.191709576955296	
VAQAPS(ph)PCIAR	ddPTM_K562_Methotrexat_30min_R1	3	VAQAPSPCIAR	11	0	F5GXF9;P51825-3;P51825-2	F5GXF9	AFF1	AF4/FMR2 family member 1	1	VAQAPS(1)PCIAR;VAQAPS(1)PCIAR;VAQAPS(1)PCIAR	113.52	0.0022441999999999996	95522000.0	7173.3	5913.200000000001	8494.599999999999	6703.5	6049.400000000001	5280.6	5896.6	7016.8	6083.7	7916.4	True	False	6857.970321066899	6890.255792785567	6711.69954557747	6115.814562855176	6845.0021334543635	6301.001214846147	7219.062651821069	6770.0151668398985	5800.870114880126	6482.6632485155815	1.0578939639718685	1.0628742429839029	1.0353305868717357	0.9434108063928189	1.0558935226230903	0.9719772527578027	1.1135951961524626	1.044326213981594	0.8948282353257244	1.0	12.662370916609673	-7.003148473751458	22.760740457693057	1.0091010571733412	1.0575637608921138	0.13397035675161995	0.05763000503141253	92.15975627268371	666311.0583899084	0.015205051746945168	0.030570699505995988	9.92776586444204e-08	7.003148473751458	0.04846270371877259	
VARPTSSEVDRFS(ph)PSGSVVPLTER	ddPTM_K562_Methotrexat_30min_R1	1	VARPTSSEVDRFSPSGSVVPLTER	24	2	Q5TC79-2;Q5TC79	Q5TC79-2	ZBTB37	Zinc finger and BTB domain-containing protein 37	1	VARPTSSEVDRFS(0.846)PS(0.022)GS(0.132)VVPLTER	98.54299999999999	9.9635e-06	29698000.0	1044.6	909.16	1255.1	1130.3	1028.2	917.56	788.6	1251.5	937.19	1079.8	True	False	998.680634768723	1059.3832369222964	991.6716619563349	1031.2083539039604	1163.4263222167117	1094.8654839780002	965.4636243303089	1207.4840356430473	893.6202414590632	884.2377565240674	1.1294254598384599	1.198075098135059	1.1214988894554665	1.1662116283720267	1.3157392495770963	1.238202594155116	1.0918597596709054	1.3655648910420415	1.010610816905035	1.0	9.78829052776165	-12.09513127445276	6.623320375976289	0.9999998085508041	1.1884916844665099	0.22792646868697586	0.0997809931710578	2.654855480798427e-07	3.620767405701574e-08	0.09092484566236231	0.02205249192889523	8.032832765685376e-13	12.09513127445276	0.18849187591570582	
VAS(ph)GSDLHLTDIDSDSNR	ddPTM_K562_Methotrexat_30min_R1	1	VASGSDLHLTDIDSDSNR	18	0	A0A0D9SFK2;Q92614-3;Q92614-4;Q92614	A0A0D9SFK2	MYO18A	Unconventional myosin-XVIIIa	1	VAS(0.791)GS(0.209)DLHLTDIDSDSNR	87.963	0.0036899999999999997	6814600.0	1349.8	1204.7	1716.1	1536.7	1438.5	1147.6	1414.3	1583.5	1641.4	1574.6	True	False	1290.4644082048844	1403.7561986012256	1355.9140618940864	1401.9798968806665	1627.6879639260267	1369.357458273195	1731.4927769342585	1527.8074074636559	1565.0916722659292	1289.4246818140357	1.0008063490683194	1.0886686274892317	1.0515651522867622	1.0872910350283367	1.2623365962222028	1.0619910395593681	1.3428413472730305	1.1848752618216132	1.21379068846741	1.0	10.332511789199149	-7.597593275714867	6.473244296623393	1.1890663414974192	1.054022207813452	0.2908461620239484	0.09253426654106328	0.2416211245725106	16.567025295855828	0.025901892499505363	0.033587071893441456	2.5258451627927975e-08	7.597593275714867	-0.13504413368396717	
VAS(ph)SPAPPEGPSHPREPSTPHR	ddPTM_K562_Methotrexat_30min_R1	1	VASSPAPPEGPSHPREPSTPHR	22	1	H7BYJ3;O14578-3;O14578;O14578-4	H7BYJ3	CIT	Citron Rho-interacting kinase	1	VAS(0.535)S(0.465)PAPPEGPSHPREPSTPHR	57.068000000000005	0.019540000000000002	13201000.0	1461.2	1674.9	2072.7	1872.1	1720.0	1513.0	1661.3	1721.1	1724.5	2387.7	True	False	1396.967397591478	1951.6487565677708	1637.668595121422	1707.9758996227588	1946.2101480380704	1805.3658368485055	2033.8888144812847	1660.5679374712324	1644.328371404043	1955.2643927139443	0.7144647050276718	0.9981508198279236	0.8375688736643471	0.8735268263398668	0.9953692990525407	0.9233359148644973	1.040211657339194	0.8492805083850233	0.8409749482123406	1.0	10.933147987983402	-6.248493057391475	24.406791047642347	0.9248296744497965	0.7144645165466508	0.44048483262413796	0.07232106713679645	1495.935543056738	2820115.706237431	0.018051244367703303	0.3157681154211431	5.64295962078284e-07	6.248493057391475	-0.2103651579031457	
VAS(ph)SPVMVSNPATR	ddPTM_K562_Methotrexat_30min_R1	2	VASSPVMVSNPATR	14	0	P51610-2;P51610;A6NEM2;P51610-4	P51610-2	HCFC1	Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6	1	VAS(0.927)S(0.072)PVMVS(0.001)NPATR;VAS(0.917)S(0.083)PVMVSNPATR	209.22	9.203700000000001e-19	120940000.0	3435.8999999999996	2978.72	3881.7	3930.1000000000004	3050.5	2619.0	3096.6	3385.3	3195.2	3534.2	True	False	3284.8619500304953	3470.9028504170715	3066.9842165691225	3585.5542348738895	3451.694218947753	3125.0846838772222	3791.09137598432	3266.237080193695	3046.655849411538	2894.1221329017953	1.1350115161646355	1.199293841458227	1.0597286761682054	1.2389090958227216	1.1926567229859464	1.0798040097719899	1.3099279166160058	1.1285761036348518	1.0527046577529209	1.0	11.498910090019574	-9.786199332714935	2.995888540217421	1.007766364899034	1.1722906080378783	0.4170593557466582	0.06930206052876797	0.23159661190166342	3.9247687853470774	0.06210330739750503	0.01739421093097675	1.6360654268823459e-10	9.786199332714935	0.16452424313884428	
VASEAPLEHKPQVEAS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	1	VASEAPLEHKPQVEASSPR	19	1	Q8TD19	Q8TD19	NEK9	Serine/threonine-protein kinase Nek9	1	VASEAPLEHKPQVEAS(0.5)S(0.5)PR	95.073	0.0010729000000000001	43280000.0	2575.9	1537.5	3266.8	2292.5	1949.6	1457.6	1776.2	1926.6	2517.5	3040.2	True	False	2462.666520295572	1791.5457419684453	2581.143323463434	2091.520084335868	2206.0065724505944	1739.260570912346	2174.5580643361595	1858.840385992724	2400.461974490971	2489.590319859669	0.9891854497708624	0.7196146802456356	1.0367743250258645	0.8401061281656016	0.8860922035457387	0.6986131641973862	0.8734602022628097	0.7466450890191048	0.9641995935404658	1.0	11.281692640556091	-5.828460424475851	15.148659067045827	0.8554993634955372	54.05047293780293	0.1021913229606245	0.11044429908063565	631901.5865347947	415696.91361262166	0.025848520318780824	1160835061.0191746	1.4843611378125177e-06	5.828460424475851	53.19497357430739	
VASEAPLEHKPQVEASS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	VASEAPLEHKPQVEASSPR	19	1	Q8TD19	Q8TD19	NEK9	Serine/threonine-protein kinase Nek9	1	VASEAPLEHKPQVEAS(0.239)S(0.761)PR	110.98	0.00032015	48516000.0	2702.9	1737.7	3425.9	2537.0	1710.8	1676.3	1282.5	2211.7	2615.6	3216.0	True	False	2584.083752361078	2024.8253891502873	2706.8504076935797	2314.5851489466054	1935.8001867811224	2000.2212507000322	1570.1332718787996	2133.913257396505	2494.0013269031115	2633.5512363228377	0.9812164338101772	0.768857412463902	1.0278328252588271	0.8788836598365951	0.7350531708219326	0.7595148418273766	0.5962038065646817	0.8102797576006286	0.9470107482645463	1.0	11.362793812378683	-6.247677921706276	23.316894624494928	0.8243336514619923	0.9812166982606403	0.10123683689039531	0.1256132132258455	2140.4978911638877	3626617.9529215074	0.03274851905856904	0.588741440184705	5.653560946281161e-07	6.247677921706276	0.15688304679864795	
VASPLS(ph)PTSLTHTSRPPAALTPVPLSQGDLSHPPR	ddPTM_K562_Methotrexat_30min_R1	1	VASPLSPTSLTHTSRPPAALTPVPLSQGDLSHPPR	35	1	I3L2W6;I3L0Y2;I3L410;I3L4Q4;I3L1N0;Q9BUL5-3;Q9BUL5-4;Q9BUL5	I3L2W6	PHF23	PHD finger protein 23	1	VAS(0.147)PLS(0.368)PT(0.368)S(0.109)LT(0.004)HT(0.002)S(0.001)RPPAALT(0.001)PVPLSQGDLSHPPR	70.42399999999999	1.3331e-05	30564000.0	1475.5	953.83	1281.3	1270.0	923.83	1066.6	1189.4	1266.6	1538.9	1581.0	True	False	1410.6387867138144	1111.4341951621218	1012.3726400005195	1158.661071802204	1045.3298378267505	1272.7053546481263	1456.1532269572272	1222.0529600842851	1467.356874893408	1294.665579796768	1.089577732448291	0.8584720351772932	0.7819568665442068	0.8949500858623943	0.8074130139389684	0.9830379169019934	1.1247330968556444	0.9439139953625079	1.1333867971710103	1.0	10.338363773558125	-8.488936971602918	6.572832422556949	1.0472237393004202	0.8805462920745785	0.4116623303757484	0.09263984644699765	0.19532165116512012	27.08253113673143	0.03300577655230365	0.02824947191140331	3.243866916054478e-09	8.488936971602918	-0.16667744722584177	
VASS(ph)PVMVSNPATR	ddPTM_K562_Methotrexat_30min_R1	2	VASSPVMVSNPATR	14	0	P51610-2;P51610;A6NEM2;P51610-4	P51610-2	HCFC1	Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6	1	VAS(0.114)S(0.886)PVMVSNPATR;VAS(0.098)S(0.902)PVMVSNPATR	121.45	0.00084553	347700000.0	6239.1	5514.7	6827.0	7125.1	5694.4	4916.3	5377.8	5686.1	5917.9	6742.2	True	False	5964.836634487404	6425.910441127399	5394.105996475101	6500.453545431405	6443.313411039533	5866.305395702782	6583.908545426751	5486.116640087841	5642.778120691207	5521.122246746217	1.0803667022592522	1.1638775875528575	0.9769944868824503	1.1773790281970917	1.1670296586598485	1.0625204683993357	1.192494614533643	0.9936596936104782	1.022034627836159	1.0	12.43074582979158	-9.284978811297789	24.840835223079907	1.0058853455617562	1.1157611127466562	0.4066487331789326	0.061981345255044604	765.3948868098634	807705.3418246246	0.03282873698088041	0.015785233773033175	5.188253511725073e-10	9.284978811297789	0.1098757671849	
VASTSMNRESSRSHAVFT(ph)IT(ph)IES(ph)MEK	ddPTM_K562_Methotrexat_30min_R1	1	VASTSMNRESSRSHAVFTITIESMEK	26	2	Q9NS87-4;Q9NS87-2;Q9NS87	Q9NS87-4	KIF15	Kinesin-like protein KIF15	3	VAS(0.004)T(0.01)S(0.024)MNRES(0.2)S(0.206)RS(0.191)HAVFT(0.7)IT(0.78)IES(0.884)MEK	47.281000000000006	0.013947999999999999	15864000.0	1804.4	1271.1	1566.2	1362.0	1194.7	1393.5	1334.3	1640.6	1605.8	2006.5	True	False	1725.080736527556	1481.1276699942052	1237.4760233893815	1242.5955746414188	1351.8239906169092	1662.7741531053484	1633.550740481778	1582.8991680990675	1531.1467084955702	1643.1034066174668	1.0498917655333997	0.9014208503427615	0.7531333806536742	0.7562491621872154	0.8227260592197343	1.0119717033076916	0.9941862051425271	0.9633594341805077	0.9318626583871715	1.0	10.68220756197975	-8.259302384749237	24.865473203951474	0.9788553546678784	0.8478370550990757	0.36438309710786265	0.08118638105799034	211.4479267742121	2460354.994773718	0.030116005787531923	0.02869512584954095	5.504243208758719e-09	8.259302384749237	-0.13101829956880273	
VATLNSEEES(ph)DPPTYK	ddPTM_K562_Methotrexat_30min_R1	1	VATLNSEEESDPPTYK	16	0	C9JMQ6;C9JQ82;C9JBS3;C9JEJ8;C9JHN6;C9JT62;C9JHS7;C9JK79;C9JHZ8;C9JES8;C9JZI8;C9J5E5;C9JIZ1;A0A024R4E5;Q00341-2;Q00341	C9JMQ6	HDLBP	Vigilin	1	VATLNS(0.069)EEES(0.897)DPPT(0.034)YK	150.12	6.4947e-10	12476000.0	1352.6	915.09	2059.0	1414.2	1072.7	823.37	1047.9	1176.5	1085.3	1671.1	True	False	1293.1413235575092	1066.293068629531	1626.8440378998446	1290.219281687147	1213.7788522095582	982.4745995280597	1282.918249981905	1135.1218281534525	1034.8446398868125	1368.4475967099181	0.9449695601545404	0.7791990509487975	1.1888245058204454	0.9428342632842858	0.8869750329700448	0.7179482808769355	0.9374989974525539	0.8294960149607207	0.756217952645634	1.0	10.418324473903313	-7.836348208386115	3.8442699303856176	0.8400626811005567	0.9676187482378349	0.16965438630569718	0.11957881631655155	0.3823814891189878	11.058307562191914	0.03781659827974697	0.044421708038681	1.4576450817702369e-08	7.836348208386115	0.12755606713727818	
VAVFTWHGCS(ph)VQLSGR	ddPTM_K562_Methotrexat_30min_R1	1	VAVFTWHGCSVQLSGR	16	0	E9PKV5;E9PJM4;E9PL17;Q92989-2;Q92989	E9PKV5	CLP1	Polyribonucleotide 5-hydroxyl-kinase Clp1	1	VAVFT(0.003)WHGCS(0.499)VQLS(0.499)GR	75.509	0.031287999999999996	7894400.0	0.0	0.0	0.0	0.0	0.0	68.656	0.0	0.0	130.91	68.154	True	False	0.0	0.0	0.0	0.0	0.0	81.92280032694713	0.0	0.0	124.82402267353045	55.81065017423718	0.0	0.0	0.0	0.0	0.0	1.4678703808536457	0.0	0.0	2.2365627758113917	1.0	5.802468548257954	-9.065941800422191	0.6180298487724055	1.2827374330134667	6.991295862473246e-13	0.35058125420725694	0.6212843148551056	0.9573119797063471	0.735597579228358	0.5845835189863532	0.35174763653590935	8.591286451746263e-10	9.065941800422191	-1.2827374330127674	
VAVPTGPTPLDS(ph)TPPGGAPHPLTGQEEAR	ddPTM_K562_Methotrexat_30min_R1	3	VAVPTGPTPLDSTPPGGAPHPLTGQEEAR	29	0	A0A0A0MR08;E7ESU0;O94966-2;O94966-4;O94966-3;O94966;O94966-7;O94966-6;O94966-5	A0A0A0MR08	USP19	Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 19	1	VAVPT(0.002)GPT(0.005)PLDS(0.539)T(0.454)PPGGAPHPLTGQEEAR;VAVPT(0.019)GPT(0.042)PLDS(0.469)T(0.469)PPGGAPHPLTGQEEAR;VAVPT(0.179)GPT(0.04)PLDS(0.391)T(0.391)PPGGAPHPLTGQEEAR	93.179	7.429500000000001e-06	82678000.0	4066.5	3836.3	5299.099999999999	3988.2	3623.5099999999998	3350.4	3784.66	3821.1	3421.8199999999997	4181.6	True	False	3887.7415290896156	4470.183369049461	4186.891326486191	3638.5606980799566	4100.065077626413	3997.8173825361723	4633.466346002972	3686.7097471799025	3262.7403350755453	3424.271719467531	1.1353484324819156	1.3054406119805726	1.2227100152955288	1.0625794318231694	1.1973538940607105	1.167494203163827	1.3531246132311805	1.0766405382552937	0.9528275214044335	1.0	11.741581470272285	-9.504149698855866	7.652664932121337	0.9880313667908751	1.2043578331338765	0.5916505906681484	0.07768840973707469	0.11896702872041376	37.84494386156604	0.04660834111449367	0.02053511071703103	3.132205884535118e-10	9.504149698855866	0.21632646634300134	
VAY(ph)VQLPS(ph)QT(ph)PS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	VAYVQLPSQTPSK	13	0	A8MVT4;A8MYK1	A8MVT4	MRPL23		4	VAY(1)VQLPS(1)QT(1)PS(1)K	64.565	0.020275	39525000.0	0.0	0.0	136.98	0.0	60.713	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	108.22976994245786	0.0	68.69782367316016	0.0	0.0	0.0	0.0	0.0											0.0														
VCTFSPQRVS(ph)PTTSPRPAS(ph)PVPGSER	ddPTM_K562_Methotrexat_30min_R1	1	VCTFSPQRVSPTTSPRPASPVPGSER	26	2	A0A5E8;Q99501;Q99501-2;Q99501-4	A0A5E8	GAS2L1	GAS2-like protein 1	2	VCT(0.037)FS(0.113)PQRVS(0.843)PT(0.064)T(0.157)S(0.122)PRPAS(0.645)PVPGS(0.019)ER	54.036	0.022788	22511000.0	1839.2	1803.2	2596.0	2104.7	1999.2	1691.0	1925.4	2001.1	2144.6	2481.0	True	False	1758.350970195899	2101.1481508406487	2051.1350764390468	1920.1842187575573	2262.1298418358783	2017.761817654212	2357.2199623200304	1930.7201787657232	2044.8980140986423	2031.6668586184594	0.8654720938803834	1.0341991561891386	1.0095823868652491	0.9451274999205772	1.1134354199064578	0.993155845947252	1.160239412441343	0.9503133698201977	1.0065124631157198	1.0	10.988448141092187	-6.2594485026040205	24.319509387217934	1.025298459232397	0.865472012962272	0.35766131559244085	0.06354496264235715	132.99571941933894	1624425.2291645426	0.01531080022020119	0.09696992465249142	5.502391624267051e-07	6.2594485026040205	-0.159826446270125	
VDDDS(ph)LGEFPVTNSR	ddPTM_K562_Methotrexat_30min_R1	3	VDDDSLGEFPVTNSR	15	0	J3KMZ8;Q92785;Q92785-2	J3KMZ8	DPF2	Zinc finger protein ubi-d4	1	VDDDS(1)LGEFPVTNSR;VDDDS(1)LGEFPVTNSR;VDDDS(0.999)LGEFPVT(0.001)NSR	257.46	2.3987999999999993e-90	186204000.0	5126.17	4286.63	5972.44	5507.43	4202.77	4826.12	4352.110000000001	5590.29	5433.81	6642.22	True	False	4900.829704702645	4994.922747248255	4718.906462221732	5024.602162736697	4755.507920854633	5758.699387000204	5328.181453314965	5393.676332093465	5181.193359129604	5439.249593572231	0.9010121010983102	0.9183110025233897	0.8675657149100575	0.9237675301156361	0.8742948524506761	1.058730489920058	0.9795802457036502	0.9916214064652188	0.9525566477501636	1.0	12.40919191365469	-8.24615008077405	24.998788200998778	0.9949167535558479	0.8980276549493824	0.7395282152762629	0.02951698054193751	417.038742196262	681880.3361766512	0.009503787636707074	0.009470064986603724	5.673485107737501e-09	8.24615008077405	-0.09688909860646544	
VDDFLRR	ddPTM_K562_Methotrexat_30min_R1	1	VDDFLRR	7	1	J3QR07;Q96MU7-2;Q96MU7	J3QR07	YTHDC1	YTH domain-containing protein 1	0		83.75299999999999	0.018928999999999998	0.0	3097.7	2484.0	3625.3	3215.1	2769.6	2505.5	2522.8	2783.7	3028.5	3544.2	False	True	2961.528817081249	2894.4387792192642	2864.399072655808	2933.237174764776	3133.8509453524666	2989.6524152174	3088.6021195289145	2685.795693183819	2887.7056960261766	2902.311035999814	1.020403664647554	0.9972875902400178	0.9869373189593562	1.0106556941628098	1.079777772430545	1.0300937350043524	1.0641871533472378	0.925398987175953	0.9949676861671699	1.0	11.502986423656258	-9.25741383484307	24.992611428504777	0.9701375034638156	1.0258761874602316	0.36330522600627024	0.03239737367916397	386.32615268838987	2398524.018173194	0.016691274691047392	0.00918021517243694	5.528230786039888e-10	9.25741383484307	0.055738683996416016	
VDDSTGTVIS(ph)DVEEDAGELSR	ddPTM_K562_Methotrexat_30min_R1	4	VDDSTGTVISDVEEDAGELSR	21	0	Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8;S4R403	Q9Y2D8-2	SSX2IP	Afadin- and alpha-actinin-binding protein	1	VDDST(0.001)GT(0.041)VIS(0.959)DVEEDAGELSR;VDDSTGTVIS(1)DVEEDAGELSR;VDDSTGT(0.002)VIS(0.998)DVEEDAGELSR;VDDST(0.008)GT(0.082)VIS(0.91)DVEEDAGELSR	240.82	1.0891999999999998e-76	118563000.0	5954.29	5332.87	7238.67	6701.0	5188.1	5335.860000000001	5028.77	6278.77	5980.6900000000005	7236.66	True	False	5692.546541065541	6214.036124208951	5719.372089278515	6113.5337339736725	5870.426086649019	6366.93942776369	6156.599683139144	6057.942100259285	5702.649027296289	5926.030749330853	0.9606002367956534	1.0486000473268924	0.9651269679834731	1.0316405689700465	0.9906168791499923	1.0744020233919007	1.0389078193416945	1.0222596467194045	0.9623050011916008	1.0	12.532850396920114	-7.311496449142188	24.99934979327141	1.0202742574764117	0.9971579691392598	0.08558529101211154	0.036152375785452155	968.2720703633375	483569.2055231773	0.010086070835292447	0.014960089728078326	4.8809409196287695e-08	7.311496449142188	-0.023116288337151847	
VDEFPLCGHMVSDEYEQLSSEALEAAR	ddPTM_K562_Methotrexat_30min_R1	1	VDEFPLCGHMVSDEYEQLSSEALEAAR	27	0	X1WI28;P27635;B8A6G2;A6QRI9	X1WI28	RPL10	60S ribosomal protein L10	0		150.72	3.9106e-28	10548000.0	1114.1	895.83	1074.3	1037.4	798.41	872.35	721.27	1123.6	1227.4	1534.4	False	True	1065.125497985673	1043.8506809935561	848.8191111781467	946.4527526674063	903.4149094738822	1040.9192913250454	883.0331579009916	1084.0823511374572	1170.338441902767	1256.5052913600018	0.8476888281407989	0.830757091252457	0.6755396232827732	0.7532421543907671	0.7189901353268909	0.828424120839465	0.7027691518475216	0.8627757945723257	0.9314234089981662	1.0	10.295201031330524	-9.685783671167524	2.071236250190112	0.9904544108745345	0.7644412073715183	0.6745845423180329	0.05607737774117109	0.18528706828309502	1.4727439320113263	0.05221249034486071	0.015554532248267153	2.0616566007452378e-10	9.685783671167524	-0.22601320350301612	
VDGETAS(ph)DSESRAESAPLPVSADDTPEVLNR	ddPTM_K562_Methotrexat_30min_R1	1	VDGETASDSESRAESAPLPVSADDTPEVLNR	31	1	O95674	O95674	CDS2	Phosphatidate cytidylyltransferase 2	1	VDGET(0.127)AS(0.354)DS(0.354)ES(0.114)RAES(0.047)APLPVS(0.003)ADDTPEVLNR	47.795	0.008292399999999998	16339000.0	382.28	270.19	514.81	126.67	307.96	280.33	361.35	382.51	300.96	390.56	True	False	365.47542892914754	314.8343050552545	406.75841629490964	115.5650377678623	348.462137901049	334.4998050520432	442.3919359012897	369.0569064912679	286.96843529009027	319.82579939622144	1.1427327927237425	0.9843930841402099	1.2718123961944368	0.3613374467789343	1.0895372998641393	1.0458812443634125	1.383227796933371	1.1539310061539334	0.8972648105057176	1.0	8.321142511206185	-8.524538780938382	24.980173384770097	1.1347364691415864	0.965119999325297	0.05866346680353285	0.25351017591400943	147.97301426489483	2226610.419683331	0.09750018217339129	0.07607904438849385	2.988554767830197e-09	8.524538780938382	-0.16961646981628942	
VDLYQQAS(ph)PPDALR	ddPTM_K562_Methotrexat_30min_R1	1	VDLYQQASPPDALR	14	0	P48634-2;P48634-3;P48634;P48634-4	P48634-2	PRRC2A	Protein PRRC2A	1	VDLYQQAS(1)PPDALR	89.484	0.025814999999999998	0.0	579.25	627.61	833.18	500.66	626.53	517.05	458.86	723.11	706.12	733.61	True	False	553.7868635743658	731.3118849540264	658.306904078384	456.76791512479616	708.9296767734256	616.9625948066885	561.7710355823046	697.6778114373506	673.2926353237592	600.7461201737552	0.9218317771477121	1.21733933919125	1.0958154900575643	0.7603343572034791	1.1800819896570953	1.0269938899118365	0.9351222034023662	1.1613521719217421	1.1207606886067298	1.0	9.230611615736345	-9.278702209252089	24.67793513545351	1.1057923062298325	1.026658538076107	0.06023512482247595	0.13018441265265485	2187.2056160775414	3126679.662146418	0.07051971084411636	0.03403547487585013	5.263780740872339e-10	9.278702209252089	-0.07913376815372541	
VDNDENEHQLSLR	ddPTM_K562_Methotrexat_30min_R1	4	VDNDENEHQLSLR	13	0	P06748;P06748-3;P06748-2;E5RGW4	P06748	NPM1	Nucleophosmin	0	;;;	219.97	4.1335000000000002e-25	263548000.0	15029.400000000001	11891.400000000001	16304.5	13737.5	13088.099999999999	11139.6	11668.4	16918.9	17455.4	18593.4	False	True	14368.725571695428	13856.251730760048	12882.408264175816	12533.154703844693	14809.414557289005	13292.170043726104	14285.335726776279	16323.852697276187	16643.902263964115	15225.955086270225	0.9436994586075069	0.9100415476238146	0.8460821138105374	0.8231440742358603	0.9726427323198379	0.8729941713615139	0.9382226366645376	1.0721069781688752	1.0931269775629708	1.0	13.894245107189018	-9.148227990692119	3.5549981663488723	1.062540837850997	0.8940761351964538	0.6998497157398711	0.04678555622036978	0.13356948622429335	3.0720026822440465	0.024968223363612443	0.013399074429724631	7.108402473245366e-10	9.148227990692119	-0.16846470265454327	
VDNLTYRTS(ph)PDTLR	ddPTM_K562_Methotrexat_30min_R1	2	VDNLTYRTSPDTLR	14	1	J3QL05;J3KP15;Q01130-2;Q01130	J3QL05	SRSF2	Serine/arginine-rich splicing factor 2	1	VDNLT(0.002)YRT(0.143)S(0.855)PDTLR;VDNLTYRT(0.113)S(0.834)PDT(0.052)LR	145.94	4.4497e-08	406560000.0	5040.9	3770.8	4775.3	3959.1	4121.9	3886.2	3576.8	5470.7	5618.5	6083.3	True	False	4819.308071803233	4393.860607359096	3773.0297883356607	3612.0118498992956	4664.002098371004	4637.153149478294	4378.988449790322	5278.292380177719	5357.297161341617	4981.5554216177625	0.9674303834680937	0.8820258404215823	0.757399942187207	0.7250771183282938	0.9362541824048134	0.9308645105813911	0.879040395854563	1.0595671298310259	1.0754265902760611	1.0	12.282380558820739	-9.001279389203559	1.2325344514532386	1.0564443099658625	0.8459690413624665	0.5141278171739934	0.07642255517033499	0.4049012607052572	1.1613720965292031	0.06235988303615322	0.02893565269180405	9.970584324047541e-10	9.001279389203559	-0.21047526860339594	
VDPSLMEDS(ph)DDGPSLPTK	ddPTM_K562_Methotrexat_30min_R1	1	VDPSLMEDSDDGPSLPTK	18	0	Q5T092;A0A0A0MR06;Q5T091;O15258	Q5T092	RER1	Protein RER1	1	VDPS(0.003)LMEDS(0.991)DDGPS(0.006)LPTK	74.987	0.01409	21920000.0	1507.0	1143.7	2456.9	1910.4	1748.2	1027.1	1095.4	1906.4	1373.8	1734.6	True	False	1440.7540844308494	1332.676985423941	1941.2302655250753	1742.9181980873454	1978.1189423256726	1225.5725386828158	1341.071334125564	1839.3508314421938	1309.9323378572765	1420.4471313823362	1.014296169565108	0.9382094947293251	1.366633240081191	1.2270208158970268	1.3926030040981723	0.862807570662715	0.9441191470607384	1.294909744125565	0.9221971792660033	1.0	10.472129420510598	-8.27219146454676	24.99718006050972	1.01944562700045	1.186008435632002	0.22540531710425737	0.16846469648512877	1359.8120671972713	3161373.1756218066	0.06261584099277749	0.05575265290676939	5.343287414714565e-09	8.27219146454676	0.16656280863155204	
VDS(ph)TTCLFPVEEK	ddPTM_K562_Methotrexat_30min_R1	3	VDSTTCLFPVEEK	13	0	A0A6I8PRN4;A0A6I8PTT9;Q06210-2;Q06210	A0A6I8PRN4	GFPT1	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1	1	VDS(0.829)T(0.166)T(0.005)CLFPVEEK;VDS(0.963)T(0.037)TCLFPVEEK;VDS(0.772)T(0.224)T(0.003)CLFPVEEK	214.48	4.1623e-18	102262500.0	9184.6	6295.5	9729.199999999999	9982.599999999999	5062.700000000001	4966.0	5315.6	7320.900000000001	8527.3	10850.2	True	False	8780.855981329514	7335.724369796649	7687.17387738473	9107.440956986353	5728.5337886467105	5925.609217309764	6507.758612084948	7063.419797474381	8130.867684241052	8885.123639412339	0.9882649175954831	0.8256187159013842	0.8651735405556111	1.0250212970124428	0.6447331541044932	0.6669135352292839	0.7324330956091648	0.7949714696307315	0.9151102465445069	1.0	13.117176136630837	-7.75710359309993	24.99993191599116	0.7728401340625136	0.9145019552769142	0.23613301389767916	0.11383578244904786	157.36404155835106	907346.829128492	0.03445447916403391	0.04293851046755823	1.7494293440979284e-08	7.75710359309993	0.14166182121440063	
VDSSTNSS(ph)PSPQQSESLS(ph)PAHTSDFR	ddPTM_K562_Methotrexat_30min_R1	1	VDSSTNSSPSPQQSESLSPAHTSDFR	26	0	F2Z3H6;Q9BQE9-2;Q9BQE9-3;Q9BQE9	F2Z3H6	BCL7B	B-cell CLL/lymphoma 7 protein family member B	2	VDS(0.001)S(0.003)T(0.018)NS(0.115)S(0.413)PS(0.389)PQQS(0.065)ES(0.194)LS(0.801)PAHT(0.001)SDFR	131.4	2.1434e-12	24082000.0	1940.1	1938.6	2353.3	1733.1	1891.3	1744.8	1336.8	2088.7	1955.5	2590.3	True	False	1854.8155270101463	2258.9206994341644	1859.3744897473077	1581.161813811338	2140.039100572327	2081.957906234813	1636.6114291209194	2015.2392371135704	1864.589231824069	2121.171569479803	0.8744297508499145	1.064940117026056	0.876579017228343	0.74541910544233	1.008894863274615	0.981513205339346	0.7715601381185222	0.9500595171600327	0.8790374426342804	1.0	11.05064560163007														
VDSSTNSSPS(ph)PQQSESLS(ph)PAHTSDFR	ddPTM_K562_Methotrexat_30min_R1	1	VDSSTNSSPSPQQSESLSPAHTSDFR	26	0	F2Z3H6;Q9BQE9-2;Q9BQE9-3;Q9BQE9	F2Z3H6	BCL7B	B-cell CLL/lymphoma 7 protein family member B	2	VDSST(0.001)NS(0.005)S(0.034)PS(0.96)PQQS(0.002)ES(0.06)LS(0.935)PAHT(0.002)S(0.001)DFR	172.18	3.454e-25	26046000.0	2073.9	1498.3	2512.8	1758.6	1656.4	1791.2	1516.1	1938.7	1959.2	2390.0	True	False	1982.7338392177437	1745.8686082545173	1985.3976194437726	1604.4262684026412	1874.2456332617796	2137.324049545962	1856.1240183200368	1870.51482213438	1868.1172196316613	1957.147840426488	1.013073104781742	0.8920473825186706	1.0144341569061683	0.819777757848388	0.9576413158718541	1.0920606023713626	0.9483821201343497	0.9557350668648366	0.9545100176104091	1.0	10.934537024067867	-8.003194342977523	24.9919055086541	0.9892156977520432	0.9313686214534412	0.1386222027730285	0.06500798410071769	259.9251751444612	2033629.7883979962	0.020112796952301237	0.022360798023582804	9.926717371061367e-09	8.003194342977523	-0.057847076298601974	
VDSSTNSSPSPQQSESLS(ph)PAHTSDFR	ddPTM_K562_Methotrexat_30min_R1	2	VDSSTNSSPSPQQSESLSPAHTSDFR	26	0	F2Z3H6;Q9BQE9-2;Q9BQE9-3;Q9BQE9	F2Z3H6	BCL7B	B-cell CLL/lymphoma 7 protein family member B	1	VDSSTNSSPSPQQS(0.005)ES(0.285)LS(0.709)PAHTSDFR;VDSSTNSSPSPQQSES(0.02)LS(0.968)PAHT(0.009)S(0.002)DFR	192.1	3.0548999999999998e-30	54272000.0	1948.44	1454.24	2618.48	1935.3600000000001	1956.81	1636.52	1603.6200000000001	2281.5699999999997	1821.8600000000001	2198.78	True	False	1862.7889105961808	1694.528442146466	2068.896831646422	1765.6899936402465	2214.1648138269643	1952.7543286974997	1963.2726061990486	2201.3258898938143	1737.1621262546644	1800.5596353861722	1.0345610742277147	0.9411120902879924	1.149029885479299	0.9806339978634214	1.2297092361242925	1.0845263274374612	1.0903679987127883	1.2225787175450529	0.9647901086497972	1.0	10.814229667723247	-6.760414328834136	24.99999011472471	1.0990258971571853	0.9878365763861607	0.165612414034086	0.09018726450540882	39.237404495702776	956829.2098023096	0.021783432829059264	0.0512973684014927	1.7361437097422368e-07	6.760414328834136	-0.11118932077102461	
VDVET(ph)ELQTY(ph)KHS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	VDVETELQTYKHSR	14	1	H0YD93;Q8WXA3-5;Q8WXA3-4;Q8WXA3;Q8WXA3-3;Q8WXA3-1	H0YD93	RUFY2	RUN and FYVE domain-containing protein 2	3	VDVET(1)ELQT(0.274)Y(0.727)KHS(1)R	69.422	0.027167	88017000.0	0.0	0.0	0.0	61.916000000000004	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	56.48792041079151	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
VEAEAGGSGART(ph)PPLSR	ddPTM_K562_Methotrexat_30min_R1	1	VEAEAGGSGARTPPLSR	17	1	Q9Y3Q8	Q9Y3Q8	TSC22D4	TSC22 domain family protein 4	1	VEAEAGGS(0.035)GART(0.867)PPLS(0.098)R	170.09	1.3249e-06	36288000.0	1580.2	1454.8	1743.2	1411.8	1456.0	1412.7	1403.9	1561.3	1610.8	1938.3	True	False	1510.7363000780542	1695.1809726280926	1377.3261422374976	1288.0296859609057	1647.4895206647861	1685.684281372032	1718.7603121954364	1506.3881940467356	1535.9142595869137	1587.2550874889794	0.9517917516761738	1.0679952995519144	0.8677408899765525	0.8114824744386581	1.037948804606509	1.0620122087866586	1.0828507186670902	0.949052364626423	0.9676543308591398	1.0	10.632318286736927														
VEAEAGGSGART(ph)PPLSRR	ddPTM_K562_Methotrexat_30min_R1	1	VEAEAGGSGARTPPLSRR	18	2	Q9Y3Q8	Q9Y3Q8	TSC22D4	TSC22 domain family protein 4	1	VEAEAGGS(0.382)GART(0.611)PPLS(0.007)RR	80.361	0.0094899	23490000.0	3535.3	3268.0	3920.2	4895.9	2939.0	3335.4	3070.8	3297.3	3717.8	4371.9	True	False	3379.8924450486966	3807.9814534978054	3097.4035927027535	4466.684048375123	3325.5300145836572	3979.9188448278296	3759.505069228397	3181.332090072569	3544.960289478661	3580.106545422829	0.9440759380108096	1.0636503146439356	0.8651707856747415	1.2476399771078837	0.9288913534809046	1.1116760896169866	1.0501098281655694	0.8886138023294045	0.9901829022409674	1.0	11.805786807980068	-9.235428478015713	24.26424915610177	0.9545487361515211	1.032718135745506	0.0873009037577469	0.10396038405151674	1128.8566621216337	1053055.598627412	0.046296023592534284	0.026715549767055733	5.815291938227543e-10	9.235428478015713	0.07816939959398483	
VEEAS(ph)PGRPSSVDTLLSPTALIDSILR	ddPTM_K562_Methotrexat_30min_R1	1	VEEASPGRPSSVDTLLSPTALIDSILR	27	1	E9PMQ6;Q00613-2;Q00613	E9PMQ6	HSF1	Heat shock factor protein 1	1	VEEAS(0.78)PGRPS(0.105)S(0.105)VDT(0.007)LLS(0.001)PT(0.001)ALIDS(0.001)ILR	47.225	0.022325	26822000.0	965.22	823.05	849.81	820.97	791.14	752.24	932.22	1339.0	1214.6	1471.1	True	False	922.7900845217953	959.0450230420344	671.4464943407805	748.9968347381531	895.1887770458368	897.5997337150826	1141.2940652716209	1291.9066110475758	1158.13351110893	1204.669534749543	0.7660109747140308	0.796106314119934	0.5573698636617201	0.6217446470860355	0.7430990418728828	0.7451003846475609	0.9473918218649913	1.0724157736056386	0.9613702992412039	1.0	10.23442172492265	-8.765877592027492	2.5206809734757134	1.0154821726402166	0.6924045223246195	0.8098447202318758	0.06971715250194192	0.1259464056203574	1.6360792753505606	0.035232046723781836	0.023428937484682714	1.7144404626424476e-09	8.765877592027492	-0.3230776503155971	
VEEASPGRPS(ph)SVDTLLSPTALIDSILR	ddPTM_K562_Methotrexat_30min_R1	1	VEEASPGRPSSVDTLLSPTALIDSILR	27	1	E9PMQ6;Q00613-2;Q00613	E9PMQ6	HSF1	Heat shock factor protein 1	1	VEEAS(0.028)PGRPS(0.486)S(0.486)VDTLLSPTALIDSILR	81.38	0.00033833	28966000.0	1293.6	900.84	1131.4	1279.3	802.31	845.11	807.91	1429.2	1094.9	2100.5	True	False	1236.7348929129053	1049.6884983381167	893.9346014958152	1167.1457552413844	907.8278278328048	1008.4155468466882	989.1043833790255	1378.9342259217283	1043.9983379821904	1720.0790957388444	0.7189988506788271	0.6102559474959682	0.5197055203509893	0.6785419101556185	0.5277826060916435	0.5862611488883495	0.5750342445468559	0.8016690798334594	0.6069478668559426	1.0	10.748259191686273	-10.853320591865089	0.6111276043373215	1.0178249286240344	0.6014071662328219	0.6615779492294387	0.0811399559214106	1.9438596106020514	0.9491203196732105	0.16721142860132324	0.03275161188511039	1.4017785435637463e-11	10.853320591865089	-0.41641776239121253	
VEFMDDTSR	ddPTM_K562_Methotrexat_30min_R1	1	VEFMDDTSR	9	0	P62857	P62857	RPS28	40S ribosomal protein S28	0		100.02	0.019365	0.0	712.96	499.65	769.08	463.29	460.19	428.5	533.11	477.62	496.0	553.32	False	True	681.6191320741991	582.2086699021355	607.6606181000546	422.67408500412836	520.713051177698	511.3015605350856	652.6734881647616	460.8218338824071	472.9410682611801	453.10838621957475	1.5043180678273496	1.2849214174994308	1.3410932937480093	0.932832182892554	1.1492019724511617	1.1284310246407814	1.4404356838552934	1.0170234052103693	1.0437702824418582	1.0	8.823712382558114	-6.702029124571876	1.5966786302523648	1.1231600659340943	1.4832723389892626	0.42908608586877117	0.1417632941717486	0.527452814445251	2.2385125252492863	0.042393070891967456	0.2306851537544571	1.9859617307131483e-07	6.702029124571876	0.36011227305516824	
VEHPNGTGVLGPHS(ph)PPAQPTPGPPDNTLQETGTFPSS	ddPTM_K562_Methotrexat_30min_R1	1	VEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS	37	0	H7C100;F2Z2W7;Q8IZ69	H7C100	TRMT2A	tRNA (uracil-5-)-methyltransferase homolog A	1	VEHPNGT(0.001)GVLGPHS(0.933)PPAQPT(0.054)PGPPDNT(0.007)LQET(0.003)GT(0.002)FPSS	48.224	0.0024648000000000005	28096000.0	824.74	720.47	1106.0	1023.4	1133.7	944.1	712.45	1417.6	1128.2	1509.2	True	False	788.4854171157921	839.5154216039056	873.8657143842782	933.6801109310038	1282.8014214132331	1126.5339633633012	872.2350483821053	1367.7422044966713	1075.7502282505318	1235.8692555529942	0.638000673269424	0.6792914524184529	0.7070858915357222	0.7554845358728705	1.0379750249869586	0.9115316675300167	0.7057664429008071	1.1067046116335908	0.870440156527062	1.0	10.271310411122503	-7.588947805002519	5.2349167899781754	0.9305478145126499	0.6831172884776919	0.5827289244340801	0.10242417785740701	0.15003734496436194	7.893911981789919	0.03064383915710343	0.0401340516921679	2.5766308067053106e-08	7.588947805002519	-0.24743052603495796	
VEILANDQGNR	ddPTM_K562_Methotrexat_30min_R1	2	VEILANDQGNR	11	0	P17066;P48741	P17066	HSPA6;HSPA7	Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7	0	;	187.99	0.00094367	98233000.0	4644.0	3691.3	5367.6	4861.5	4048.0	3819.3	4438.4	4098.7	4570.6	5214.9	False	True	4439.855320568589	4301.224583628046	4241.014112594081	4435.29984296568	4580.382953057043	4557.32567129907	5433.824182383521	3954.546397834722	4358.113803618044	4270.431076585813	1.0396738036381634	1.0072108661842292	0.9931114766954041	1.0386070547500041	1.0725809340819605	1.0671816473719153	1.2724298987463896	0.9260297911180342	1.0205325236398226	1.0	12.060165994007205	-7.549809909244516	4.075238505067674	1.0668379396902827	1.012772678705817	0.054388915357154066	0.0836106876191371	0.6253360477954918	23.38207846383257	0.02590490476743157	0.03550609041874417	2.8196168078820274e-08	7.549809909244516	-0.054065260984465624	
VEMGTSSQNDVDMSWIPQET(ph)LNQINKASPR	ddPTM_K562_Methotrexat_30min_R1	2	VEMGTSSQNDVDMSWIPQETLNQINKASPR	30	1	C9JBX5;A0A3B3IRT8;P43307-2;P43307	C9JBX5	SSR1	Translocon-associated protein subunit alpha	1	VEMGTSSQNDVDMS(0.007)WIPQET(0.597)LNQINKAS(0.396)PR;VEMGTSSQNDVDMS(0.004)WIPQET(0.584)LNQINKAS(0.412)PR	80.904	9.7116e-06	46621000.0	5656.700000000001	3716.6	6922.7	5443.8	3812.2	3590.2	3222.2	5373.4	5026.9	6974.0	True	False	5408.038241141333	4330.704978601574	5469.719874292984	4966.550506044755	4313.57111997136	4283.955338700267	3944.860373214712	5184.4144763278855	4793.200516213962	5710.941020558293	0.9469609687218677	0.7583172305600542	0.9577615763502094	0.869655366456443	0.7553170492294231	0.7501312521489627	0.6907548789269529	0.9078038904035233	0.8393013513813852	1.0	12.47951276997646	-5.453945092304895	18.218488823491093	0.8366042205155115	0.840533801270678	0.0	0.10060368033416014	0.0	0.0	0.0228645026330672	0.0	3.5160489099818553e-06	5.453945092304895	0.003929580755166473	
VENMSSNQDGNDS(ph)DEFM	ddPTM_K562_Methotrexat_30min_R1	3	VENMSSNQDGNDSDEFM	17	0	Q86WR0-2;Q86WR0	Q86WR0-2	CCDC25	Coiled-coil domain-containing protein 25	1	VENMSSNQDGNDS(1)DEFM;VENMSSNQDGNDS(1)DEFM;VENMSS(0.001)NQDGNDS(0.999)DEFM	113.99	0.00044571	67351000.0	5658.5	4987.3	6748.9	5574.0	4735.9	4109.9	4561.379999999999	5126.5	5453.4	6597.799999999999	True	False	5409.759115296591	5811.366555394617	5332.398119175452	5085.336074193294	5358.753860519476	4904.080008502093	5584.385577920089	4946.198089272137	5199.8726243054825	5402.874486010828	1.0012742530487406	1.0756064332868476	0.986955764562391	0.9412278755244624	0.991833860733654	0.9076797954866028	1.0335952819891026	0.9154752904363923	0.9624270631807272	1.0	12.39951145181843	-6.949737147882752	6.56300888306915	0.9627829690259411	1.0377497808212528	0.3498477950107247	0.039693524493305606	0.19004046547004327	18.417556167668476	0.009643049771204759	0.020259251827511128	1.1226977495882127e-07	6.949737147882752	0.07496681179531173	
VEPEVLSTDTQT(ph)SPEPGTR	ddPTM_K562_Methotrexat_30min_R1	1	VEPEVLSTDTQTSPEPGTR	19	0	P29375-2;P29375	P29375-2	KDM5A	Lysine-specific demethylase 5A	1	VEPEVLS(0.044)T(0.274)DT(0.07)QT(0.366)S(0.123)PEPGT(0.123)R	94.61	0.0034079	8695200.0	987.04	948.03	1330.3	948.65	774.96	745.98	792.42	1092.3	1320.7	1107.1	True	False	943.650903448325	1104.6758437452645	1051.08820962514	865.4833273741422	876.8808234439443	890.130077311466	970.1403565709146	1053.8831898784658	1259.3009452672188	906.5934619816587	1.0408754783932206	1.2184908562329928	1.1593820755420412	0.9546542785366477	0.9672260613122362	0.9818403889277929	1.0700941461130253	1.1624650232694784	1.3890470184007302	1.0	9.824311946850543	-11.668176607008201	8.012209753641642	1.0000000043249753	1.0984229059725588	0.05544411958883644	0.1273906743710788	0.0	0.0	0.13213466320684764	0.03204736312983815	2.1469572307109608e-12	11.668176607008201	0.0984229016475835	
VEPGSLES(ph)SPGLGR	ddPTM_K562_Methotrexat_30min_R1	1	VEPGSLESSPGLGR	14	0	H0Y4V9;Q92615	H0Y4V9	LARP4B	La-related protein 4B	1	VEPGS(0.001)LES(0.979)S(0.019)PGLGR	92.65	0.011553	5487300.0	1296.7	1047.9	1739.9	1901.3	1432.2	937.2	1251.6	1355.1	1581.8	1801.0	True	False	1239.6986206247402	1221.0476637455172	1374.7187671403308	1734.6159809586834	1620.559403500074	1118.3006360174618	1532.3031602990297	1307.4403649220085	1508.2624632571258	1474.8214479531825	0.8405753946318346	0.8279291472470359	0.9321255593673536	1.1761532105232497	1.0988173556528844	0.7582617119987543	1.0389753704935758	0.886507561126486	1.0226746195957173	1.0	10.526324587106032	-6.907262477643343	4.715459415412994	0.9929295553945303	0.8368846605874785	0.2654889505778657	0.10714898277523818	0.2933901226337036	11.227963193813384	0.02967265090923663	0.06497919470284297	1.238048112434092e-07	6.907262477643343	-0.15604489480705186	
VEQATKPS(ph)FESGR	ddPTM_K562_Methotrexat_30min_R1	2	VEQATKPSFESGR	13	1	P38159;P38159-2;H0Y6E7;H3BT71	P38159	RBMX	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed	1	VEQATKPS(1)FESGR;VEQAT(0.028)KPS(0.971)FESGR	174.24	0.0022024	49383000.0	4415.6	3421.3	5935.4	4329.4	3310.8	3028.3	2976.3	4048.0	3994.8	5138.5	True	False	4221.495511090155	3986.6116728433426	4689.6406520401815	3949.8482238271313	3746.2282314676995	3613.4761161456254	3643.8110386689023	3905.6295455717586	3809.0826199390385	4207.867856916946	1.0032386126743043	0.9474184571385958	1.1144933280951994	0.9386816216992939	0.8902913206529531	0.8587427740169521	0.8659518698238491	0.928173050670219	0.9052286691174536	1.0	12.038873683882601	-7.50802043831773	21.310747228951108	0.9012273657227015	1.0163371254014186	0.47479245350636523	0.05312532905752819	79.38697811590532	113861.32594113244	0.014841501753677216	0.0210941238609964	3.104413487993804e-08	7.50802043831773	0.11510975967871717	
VEQMPQAS(ph)PGLAPR	ddPTM_K562_Methotrexat_30min_R1	2	VEQMPQASPGLAPR	14	0	Q8N3F8;H0Y6J8	Q8N3F8	MICALL1	MICAL-like protein 1	1	VEQMPQAS(1)PGLAPR;VEQMPQAS(1)PGLAPR	158.91	6.5666e-08	37568000.0	3309.7	2769.87	3648.2	3437.9	2438.07	2972.1499999999996	2475.61	2947.16	3220.8900000000003	3428.2	True	False	3164.2095509228825	3227.5439377600896	2882.492675602824	3136.5046446840897	2758.7189393181297	3546.475923324046	3030.828560776511	2843.5067123338113	3071.151526918858	2807.3197600627964	1.1271283007861217	1.149688747137196	1.0267774681778132	1.117259490459302	0.9826878215171401	1.2632960355199137	1.0796164383884488	1.0128902139278233	1.0939799486361896	1.0	11.454977684096205	-9.004512655595821	24.995228799808682	1.0413116992548057	1.1091599724504781	0.17368870986883855	0.073388987130025	374.8103974915743	2076046.7204947919	0.030950746078656766	0.020282595893427964	9.896630240881583e-10	9.004512655595821	0.06784827319567244	
VEQSTDDMIVMAT(ph)LRLLR	ddPTM_K562_Methotrexat_30min_R1	1	VEQSTDDMIVMATLRLLR	18	1	J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2;Q96Q15	J3KRA9	SMG1	Serine/threonine-protein kinase SMG1	1	VEQSTDDMIVMAT(1)LRLLR	68.458	0.016259	0.0	2313.2	2455.4	3924.0	2991.1	2386.2	3032.7	2955.5	1694.9	2008.6	2116.6	True	False	2211.514497747472	2861.113115336141	3100.406024632827	2728.8749069823407	2700.027125144445	3618.7263538734055	3618.34610919126	1635.2894063215351	1915.2206244141255	1733.2632297266546	1.275925352721087	1.6507089438384699	1.788768129075108	1.5744145841094774	1.5577709599079503	2.087811182865801	2.0875918020610715	0.9434743541980231	1.1049796658503894	1.0	10.75927505709601	-9.276873712207614	24.96773781001004	1.0181701586089242	1.7203248730536365	0.6575199832008308	0.23197245736346217	542.0114120620453	876793.2530750412	0.13524894978102858	0.06534697977572923	5.285989398624556e-10	9.276873712207614	0.7021547144447122	
VERADGYEPPVQES(ph)V	ddPTM_K562_Methotrexat_30min_R1	2	VERADGYEPPVQESV	15	1	D6R9B6;H0Y9Y4;D6RAT0;P61247	D6R9B6	RPS3A	40S ribosomal protein S3a	1	VERADGYEPPVQES(1)V;VERADGYEPPVQES(1)V	135.61	7.3706e-05	65843000.0	4559.4	4040.1000000000004	5293.4	5556.700000000001	3765.7999999999997	3919.2	4098.6	4118.5	4883.6	5541.4	True	False	4358.974235271413	4707.6578550417635	4182.387678591079	5069.55273833331	4261.068706675447	4676.529932436653	5017.8153825516165	3973.650020611979	4656.562501936089	4537.798762736124	0.960592230547287	1.0374320460617386	0.9216776453236225	1.1171832431098283	0.9390166751480581	1.0305723494923955	1.1057818217408257	0.8756778844498638	1.0261721035704003	1.0	12.147776916052235	-3.1188550807791455	24.738323968074436	1.0019347199460447	0.041662142141807856	0.0	0.07401869957218722	0.0	0.0	0.0158986345295885	0.0	0.0007605800316669572	3.1188550807791455	-0.9602725778042368	
VESGDPSLHPPPS(ph)PGTPSATPASPPASATPSQR	ddPTM_K562_Methotrexat_30min_R1	1	VESGDPSLHPPPSPGTPSATPASPPASATPSQR	33	0	H3BLU1;Q4KMQ1	H3BLU1	TPRN	Taperin	1	VESGDPSLHPPPS(0.883)PGT(0.014)PS(0.045)AT(0.045)PAS(0.011)PPAS(0.001)AT(0.001)PSQR	87.991	5.451399999999999e-07	22238000.0	810.5	623.18	955.96	820.72	558.24	618.3	439.6	746.44	737.54	1107.3	True	False	774.8713904652973	726.1499027511513	755.3170599663601	748.768751850003	631.6583447911474	737.7777243380242	538.1914903063702	720.18728211378	703.2519263817553	906.7572400436188	0.8545521957211202	0.800820628370412	0.8329870737288254	0.8257653964957413	0.6966124083671634	0.8136441505584604	0.5935342631292152	0.7942448654494736	0.7755680300362707	1.0	9.824572549279157	-7.610227109498629	19.464044993585265	0.7611119621279345	0.8270543892356523	0.0403751196360147	0.09739399715343383	9.875428472303431	2191.8073860635436	0.02717606226289357	0.03508408648000559	2.453425588372037e-08	7.610227109498629	0.0659424271077178	
VESGDPSLHPPPSPGT(ph)PSATPASPPASATPSQR	ddPTM_K562_Methotrexat_30min_R1	1	VESGDPSLHPPPSPGTPSATPASPPASATPSQR	33	0	H3BLU1;Q4KMQ1	H3BLU1	TPRN	Taperin	1	VESGDPSLHPPPS(0.147)PGT(0.631)PS(0.023)AT(0.023)PAS(0.105)PPAS(0.028)AT(0.034)PS(0.008)QR	67.367	0.00013889	27173000.0	617.72	545.81	817.78	768.8	723.09	639.58	541.14	605.04	440.96	860.9	True	False	590.5657684370437	635.9958253162902	646.139153624932	701.4004976390031	818.1890092702607	763.169783166931	662.5044200736793	583.7604002600631	420.45986584768133	704.9826677084367	0.8377025358037413	0.9021439170747418	0.9165319705308828	0.9949187827821675	1.160580318846425	1.082536944699127	0.9397456851345949	0.8280492939742625	0.5964116355007654	1.0	9.461443978465638	-3.077010788535221	4.366070558744276	0.9333404530182681	0.47271426050199467	0.0	0.14737149624142223	0.0	0.0	0.03651210969653588	0.0	0.0008375084768845735	3.077010788535221	-0.4606261925162734	
VESGDPSLHPPPSPGTPS(ph)ATPASPPASATPSQR	ddPTM_K562_Methotrexat_30min_R1	1	VESGDPSLHPPPSPGTPSATPASPPASATPSQR	33	0	H3BLU1;Q4KMQ1	H3BLU1	TPRN	Taperin	1	VES(0.001)GDPS(0.002)LHPPPS(0.23)PGT(0.259)PS(0.374)AT(0.087)PAS(0.035)PPAS(0.008)AT(0.002)PS(0.001)QR	42.825	0.021488999999999998	16202000.0	409.18	342.52	457.64	477.47	292.81	292.38	361.96	485.13	447.65	361.12	True	False	391.1929371382978	399.1156081554675	361.5876180206339	435.61094641999864	331.3196473529231	348.8782970110812	443.1387439292397	468.0677029256985	426.83884920789797	295.7176686756539	1.3228595331831934	1.3496508678121004	1.2227460727658679	1.4730636433421267	1.1203917873311715	1.1797681842059102	1.4985196722055818	1.582819535342272	1.443399885841989	1.0	8.208076634616866	-8.76900458154667	24.988697956718106	1.429753065467553	1.2805132988553463	0.05144261604227851	0.17199027602926836	341.9621431408444	1129525.8379261543	0.0687620310548444	0.04736140932499823	1.7021405517368878e-09	8.76900458154667	-0.14923976661220673	
VET(ph)MLRNDSLSS(ph)DQSES(ph)VRPS(ph)PPK	ddPTM_K562_Methotrexat_30min_R1	1	VETMLRNDSLSSDQSESVRPSPPK	24	2	Q86UR5-5;Q86UR5-3;Q86UR5-4;Q86UR5;H0YBU6;Q86UR5-2;Q86UR5-8;Q86UR5-7;Q86UR5-6	Q86UR5-5	RIMS1	Regulating synaptic membrane exocytosis protein 1	4	VET(0.995)MLRNDS(0.034)LS(0.09)S(0.831)DQS(0.057)ES(0.996)VRPS(0.998)PPK	63.202	0.0090068	0.0	274.28	341.34	418.5	353.95	269.41	354.45	532.38	413.23	414.24	365.39	True	False	262.2229796135988	397.74063321203846	330.6625691408862	322.91975304282664	304.84213719938197	422.94244604821705	651.7797670821327	398.6964666790065	394.98207281554687	299.21433029850806	0.8763717277578075	1.3292833696007698	1.1051027162068212	1.0792255595534783	1.0188086141972525	1.413509993409316	2.17830398173741	1.3324778471714611	1.3200640237434387	1.0	8.225035461776702	-8.368753535882375	5.285136626364697	1.523959830462306	1.09809544444002	0.260919314098626	0.29902695511356564	0.28721864318383133	11.754938000088686	0.1069473594481393	0.09381853321065044	4.2780559892142844e-09	8.368753535882375	-0.42586438602228616	
VETQS(ph)DEENGRACEMNGEECAEDLR	ddPTM_K562_Methotrexat_30min_R1	1	VETQSDEENGRACEMNGEECAEDLR	25	1	Q13422-8;Q13422-5;Q13422-4;Q13422-3;Q13422-7;Q13422	Q13422-8	IKZF1	DNA-binding protein Ikaros	1	VET(0.096)QS(0.904)DEENGRACEMNGEECAEDLR	57.896	0.0085402	34546000.0	823.23	631.02	1090.6	1047.2	972.59	689.02	577.35	923.14	888.94	1028.8	True	False	787.0417949077696	735.2853294939366	861.697963930826	955.3936018828882	1100.5026324885741	822.16336345364	706.835434322982	890.6726429592675	847.6133734276079	842.474350724172	0.9342026783738236	0.8727688016399572	1.0228180397303843	1.1340328652874159	1.3062743471568088	0.9758912692676363	0.8389993519866832	1.0572103971992326	1.0060999159191237	1.0	9.71848895364034	-6.846321565606721	5.519863457934782	1.049214756808323	0.9042499280059899	0.19398307278798188	0.11371069092690078	0.33409421623255686	16.361015519783404	0.03324641848456352	0.07229375407821845	1.424552418565568e-07	6.846321565606721	-0.14496482880233308	
VEVERDNLAEDIMR	ddPTM_K562_Methotrexat_30min_R1	1	VEVERDNLAEDIMR	14	1	P08670;B0YJC4	P08670	VIM	Vimentin	0		177.42	0.00045184	17298000.0	2131.5	1748.8	2850.4	2376.9	1939.5	1791.4	1720.4	2326.4	2364.0	2608.3	False	True	2037.8018121860357	2037.7594754825466	2252.139993020747	2168.5208673753195	2194.5782454185123	2137.5626967154067	2106.243493910555	2244.579193383928	2254.0981559867528	2135.9115950562373	0.9540665526151524	0.9540467312407158	1.0544162961770194	1.0152671451358564	1.0274667970800218	1.0007730196619518	0.9861098646524736	1.050876449465049	1.0553330770824358	1.0	11.060636220070805	-6.744574648496781	24.971209622861917	1.0232578985695109	0.9540565731063527	0.5960236128151948	0.02295755255540648	168.6087262251988	249650.98323102534	0.006106810052325406	0.01606763441054495	1.800633606805357e-07	6.744574648496781	-0.06920132546315816	
VEVT(ph)PTVPR	ddPTM_K562_Methotrexat_30min_R1	1	VEVTPTVPR	9	0	Q8IXS8	Q8IXS8	FAM126B	Protein FAM126B	1	VEVT(0.992)PT(0.008)VPR	107.55	0.013253000000000001	12407000.0	496.15	550.7	615.66	516.09	527.28	424.1	434.06	620.21	525.85	534.19	True	False	474.3398400732357	641.6938147005022	486.4413794917041	470.84519098141664	596.6265621264621	506.0513228073043	531.4090042820364	598.3968627616255	501.4033482764955	437.4430145930649	1.0843465874394962	1.4669197890779977	1.1120108523031744	1.0763577775254325	1.3638955068958618	1.1568394189082272	1.2148073841718199	1.367942435469656	1.146214093149779	1.0	8.772951280048506	-10.009379422162596	24.514625372307542	0.9999999866072454	1.2323233354440972	0.2419092025090036	0.12547564291989394	431.2001456820457	1127013.3465981537	0.11614710170864849	0.029989052682538528	9.786346259022379e-11	10.009379422162596	0.2323233488368518	
VFDKDGNGYISAAELR	ddPTM_K562_Methotrexat_30min_R1	2	VFDKDGNGYISAAELR	16	1	G3V361;A0A590UJI2;Q96HY3;P0DP25;P0DP24;P0DP23;E7EMB3	G3V361	CALM1;CALM2		0	;	141.06	4.6667000000000006e-06	54621000.0	5342.9	4402.3	6826.2	6089.6	4487.200000000001	3512.0	3777.2999999999997	5057.6	5528.3	6757.5	False	True	5108.032513407821	5129.705248694428	5393.47390554246	5555.734222713938	5077.345451323511	4190.644295447422	4624.455678649345	4879.721341325031	5271.290539653794	5533.65126848619	0.92308536725069	0.9270019016029777	0.9746681971554602	1.0039906660460354	0.9175398312934331	0.7573018414284414	0.8356969845543648	0.8818266827031095	0.9525881346505292	1.0	12.434016012621813	-8.00301069506727	24.972851692786367	0.8708114595914476	0.9568399473014187	0.19698609405408918	0.0649512246889625	167.72314682170364	1391233.0338203805	0.02075174472720062	0.023083548325441534	9.930915919458823e-09	8.00301069506727	0.08602848770997118	
VFDLQFSTDS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	VFDLQFSTDSPR	12	0	C9JZP1;C9J470;E9PHA2;Q15003	C9JZP1	NCAPH	Condensin complex subunit 2	1	VFDLQFSTDS(1)PR;VFDLQFS(0.001)T(0.002)DS(0.998)PR	137.39	6.4061e-06	24904000.0	1796.0700000000002	1518.23	1890.3200000000002	1827.42	1741.6299999999999	1407.15	1440.97	1591.81	1682.3400000000001	1910.5299999999997	True	False	1717.1169133534954	1769.0917020024397	1493.5676647512544	1667.2129258525847	1970.6848721671777	1679.0618224199425	1764.1442033366031	1535.8251400535037	1604.128380601842	1564.5145035857809	1.0975397859322864	1.1307608193773717	0.9546524888890962	1.0656423587198616	1.259614319746143	1.0732158881056235	1.127598497357028	0.9816624496183814	1.0253202363578404	1.0	10.611499317580515	-9.2636534772679	24.985707718306763	1.0026185028789432	1.1004214757157376	0.2866387141509005	0.07153282090894322	283.1736801951948	3195516.9732631166	0.03899219799958882	0.020091337807792205	5.449372838347766e-10	9.2636534772679	0.0978029728367944	
VFDQQSS(ph)PMVTR	ddPTM_K562_Methotrexat_30min_R1	2	VFDQQSSPMVTR	12	0	O15357;A0A0A0MTP6	O15357;A0A0A0MTP6	INPPL1	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2	1	VFDQQS(0.103)S(0.897)PMVTR;VFDQQS(0.101)S(0.899)PMVTR	132.06	9.8181e-05	92966000.0	6747.0	6390.3	7758.8	6880.2	5878.0	5680.2	5972.5	6816.5	7288.7	7599.7	True	False	6450.409958629688	7446.188458472163	6130.333910275527	6277.02354819962	6651.0600291673145	6777.818259396486	7311.985158905364	6576.7598313710205	6949.849927893673	6223.320687401329	1.0364900481005397	1.1964976308462527	0.9850583343207675	1.008629293506762	1.0687316889569765	1.089099951592997	1.1749330504063464	1.0567926934386016	1.1167430182351281	1.0	12.603468874805596	-8.245245337439503	4.537275818456497	1.0967957378056425	1.0593884131723579	0.03548117352897073	0.06706664896421136	0.6564833493439818	35.78409191135592	0.023477844999867443	0.022367013533661908	5.685316706965468e-09	8.245245337439503	-0.037407324633284667	
VFLENVIR	ddPTM_K562_Methotrexat_30min_R1	2	VFLENVIR	8	0	P62805	P62805	HIST1H4A	Histone H4	0	;	143.89	8.737e-07	89236000.0	5297.700000000001	3906.0	5644.6	5373.5	5189.1	4347.1	4163.3	5801.6	5907.8	5608.8	False	True	5064.819451286871	4551.400109352026	4459.87559802305	4902.413597896962	5871.557604176952	5187.115551463406	5097.026004532554	5597.554439621814	5633.147667486695	4592.991969616772	1.1027276957572099	0.990944495322465	0.9710175039550899	1.0673682058072502	1.2783731482698109	1.129354369826213	1.1097398032154273	1.2187163567126507	1.2264658211359145	1.0	12.165218545816375	-7.535962594706701	23.98758963958571	1.167795519879075	1.0186165935928975	0.3957387068490553	0.07834039085021628	126.31504672444258	231580.7219075067	0.022396573223192662	0.028933776183350943	2.9109678256414787e-08	7.535962594706701	-0.14917892628617757	
VFLENVIRDAVTYTEHAK	ddPTM_K562_Methotrexat_30min_R1	1	VFLENVIRDAVTYTEHAK	18	1	P62805	P62805	HIST1H4A	Histone H4	0		83.751	0.021861000000000002	1184500.0	374.19	226.28	598.04	419.93	319.54	303.59	425.62	551.18	432.83	633.88	False	True	357.741055642455	263.6689238976388	472.5195767001566	383.11538888338544	361.56511087446825	362.254470858452	521.0761194362995	531.7946869882021	412.70782777315833	519.0781895772144	0.6891852958295794	0.5079560829022605	0.9103052029310277	0.7380687468210334	0.696552307791935	0.6978803543132986	1.0038489959686272	1.0244982310301753	0.7950783447659514	1.0	9.019808060186335	-8.75639819926439	24.9661738283137	0.9578979284589916	0.7078511635314346	0.5596183275990456	0.10828859960391092	94.65070445935675	468755.1620939967	0.04296351674304296	0.032228453916808265	1.752273127403019e-09	8.75639819926439	-0.25004676492755695	
VFPLS(ph)PASNLR	ddPTM_K562_Methotrexat_30min_R1	2	VFPLSPASNLR	11	0	A0A2R8YH03;Q5VWN6;J3KPH3	A0A2R8YH03	FAM208B	Protein FAM208B	1	VFPLS(0.985)PAS(0.015)NLR;VFPLS(0.94)PAS(0.06)NLR	102.97	0.0050182	19380000.0	2367.5	2198.5	2900.1	2443.1	2193.7	2262.1000000000004	2275.8	2849.3999999999996	2334.2	2971.7	True	False	2263.4275347644557	2561.7647568895122	2291.4086422114315	2228.9172161574515	2482.2100010180925	2699.2188100033068	2786.2060819818867	2749.184986944705	2225.6835514823533	2433.496333638238	0.9301133942455881	1.0527095198288237	0.9416117092667339	0.9159320214898672	1.0200179744290079	1.109193703188283	1.1449395026687073	1.1297263730964788	0.9146032072112511	1.0	11.248814885682481	-7.9986152442084855	6.551857799057331	1.072443882554102	0.9653648647677846	0.2891614713838978	0.07206948635609672	0.17388688759278828	37.17628759908369	0.023354418156253533	0.025356203434704468	1.0031936067736996e-08	7.9986152442084855	-0.10707901778631745	
VFPSVAS(ph)PQK	ddPTM_K562_Methotrexat_30min_R1	1	VFPSVASPQK	10	0	Q9BXL5	Q9BXL5	HEMGN	Hemogen	1	VFPS(0.008)VAS(0.992)PQK	124.38	0.002836	622640000.0	7189.0	6044.4	9943.8	6923.8	5534.4	4396.8	5063.6	7352.3	7262.5	8197.6	True	False	6872.980167865544	7043.134362766873	7856.732270067257	6316.801203892992	6262.2706065708735	5246.4193730703955	6199.24119725964	7093.715441676686	6924.867960175046	6712.935203631875	1.0238412794670029	1.0491884919366348	1.1703870262022724	0.9409894498125702	0.9328662375860294	0.7815388073807035	0.9234769902003057	1.05672335967712	1.0315708032498974	1.0	12.712728001580409	-7.290350791131253	24.00488318647912	0.9456709041550084	1.077943889567173	0.354869969387421	0.0791078923971446	493.2152143399618	409510.6720748231	0.02464738052406717	0.03656654809649974	5.124472995527909e-08	7.290350791131253	0.13227298541216448	
VGAHAGEYGAEALER	ddPTM_K562_Methotrexat_30min_R1	2	VGAHAGEYGAEALER	15	0	P69905;A0A2R8Y7C0	P69905	HBA1	Hemoglobin subunit alpha	0	;	142.39	4.2058e-06	44396000.0	6611.4	6196.4	8122.7	7519.299999999999	5797.1	6184.0	6281.799999999999	7618.4	7708.4	8151.1	False	True	6320.7707722668365	7220.249779208629	6417.856273263267	6860.0946434663865	6559.520261157848	7378.97047922747	7690.6535573397605	7350.456553849769	7350.038166500968	6674.856804226084	0.9469522654425989	1.0817085655885887	0.9614972218130431	1.0277515824943273	0.982720746459278	1.1054874577317655	1.1521825535598818	1.1012156169696314	1.1011529358723326	1.0	12.704521171642225	-8.267942864704253	24.70640264977733	1.10209462247395	1.0040471388934222	0.45016153197788045	0.050063577326127734	368.4782093432207	1399823.5333722362	0.01637602960003446	0.01477260831300993	5.3958160459757945e-09	8.267942864704253	-0.09804748358052784	
VGDGDLS(ph)AEEIPENEVSLR	ddPTM_K562_Methotrexat_30min_R1	2	VGDGDLSAEEIPENEVSLR	19	0	Q14684-2;Q14684	Q14684-2	RRP1B	Ribosomal RNA processing protein 1 homolog B	1	VGDGDLS(1)AEEIPENEVSLR;VGDGDLS(1)AEEIPENEVSLR	188.9	5.3381e-15	90119000.0	2703.1000000000004	2383.2	3541.6	2790.8	2570.3999999999996	2215.1	2225.45	2872.2	2719.9	3180.6000000000004	True	False	2584.274960600552	2776.9832925263077	2798.2665588276295	2546.1348969965275	2908.452653788987	2643.136725183823	2724.56381278961	2771.1830980215404	2593.4524426685175	2604.5625193558517	0.9922107614601176	1.0661995140792775	1.0743710462053657	0.9775672029659037	1.116676075991561	1.0148102437708084	1.046073493165154	1.063972577900298	0.9957343789581669	1.0	11.346825352306322	-9.774501928548064	24.755112036548514	0.9978671323834123	1.0450446768244352	0.1838589165756518	0.03881468369641434	366.86574447888205	695231.7522997971	0.03413505282274587	0.009042336479766041	1.6807304621631218e-10	9.774501928548064	0.047177544441022956	
VGDGDLS(ph)AEEIPENEVSLRR	ddPTM_K562_Methotrexat_30min_R1	4	VGDGDLSAEEIPENEVSLRR	20	1	Q14684-2;Q14684	Q14684-2	RRP1B	Ribosomal RNA processing protein 1 homolog B	1	VGDGDLS(1)AEEIPENEVSLRR;VGDGDLS(0.999)AEEIPENEVS(0.001)LRR;VGDGDLS(1)AEEIPENEVSLRR;VGDGDLS(1)AEEIPENEVSLRR	174.68	2.4224e-12	275312000.0	6412.5	5447.610000000001	8500.199999999999	7539.900000000001	5342.84	5362.049999999999	4964.34	5882.130000000001	6568.3	6685.3	True	False	6130.614178110699	6347.734958962416	6716.1241821059975	6878.88867344995	6045.517108920773	6398.190274602464	6077.719615531225	5675.25215387698	6262.941166653041	5474.527388118495	1.1198435487629719	1.1595037359277929	1.226795247509798	1.2565264881822267	1.104299363273168	1.1687201142675108	1.1101816074063038	1.0366652226809794	1.144014948257572	1.0	12.418518707960736	-9.34163765824405	0.5869389643820657	1.017081319777682	1.1875017950161124	0.49812355666068475	0.05236735941037969	0.6534258149241754	0.4865122027555799	0.05278316366429711	0.029404928414998203	4.5536782542998087e-10	9.34163765824405	0.1704204752384304	
VGDGMNAYMAYRVTT(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	VGDGMNAYMAYRVTTK	16	1	D6RC15;O60749;O60749-2	D6RC15	SNX2	Sorting nexin-2	1	VGDGMNAYMAYRVT(0.078)T(0.922)K	78.985	0.016738	0.0	2230.4	2399.7	2615.4	2436.3	2318.3	2461.3	2059.3	2903.6	2746.1	2288.5	True	False	2132.3542866055527	2796.20963707426	2066.4632815557334	2222.7133615997705	2623.1970849980603	2936.911390770142	2521.1504458323666	2801.4787422238537	2618.4344103871495	1874.0304739815972	1.1378439765043502	1.4920833337002175	1.1026839265667276	1.1860604149501133	1.3997622351491281	1.56716309128652	1.34530920432467	1.4948949769593576	1.3972208279110738	1.0	10.871928697800417	-7.773902917305792	24.46575434966062	1.4010209644102385	1.2393415959623262	0.11471813373589823	0.17206032167445026	305.53904464295357	599766.6047109292	0.05075695296879951	0.057972808389353585	1.683050250034798e-08	7.773902917305792	-0.1616793684479123	
VGDSTPVSEKPVSAAVDANASES(ph)P	ddPTM_K562_Methotrexat_30min_R1	1	VGDSTPVSEKPVSAAVDANASESP	24	1	Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3	Q9H8Y8-2	GORASP2	Golgi reassembly-stacking protein 2	1	VGDSTPVSEKPVSAAVDANAS(0.005)ES(0.995)P	137.41	1.8623e-16	23780000.0	1677.0	1060.9	2362.3	2125.0	1239.0	1064.9	984.19	1532.2	1426.0	2078.5	True	False	1603.2810879831025	1236.1956927833003	1866.4855127395836	1938.7045492753398	1401.9502171041695	1270.6768537078467	1204.9196607020633	1478.3116575407732	1359.7055712508939	1702.063508923202	0.9419631403750653	0.7262923423846683	1.0966015680110561	1.1390318511098607	0.8236767956978897	0.746550787938419	0.707916980996994	0.868540832812999	0.7988571308429622	1.0	10.733069153824127	-7.96320632367554	24.991042289352364	0.806237810811608	0.9685794808596596	0.25067305930224937	0.12631888441476166	239.00314991108593	162335.12805276748	0.04093236487350233	0.046412831610572594	1.088412889664686e-08	7.96320632367554	0.16234167004805167	
VGDTSLDPNDFDFT(ph)VTGRGSPSRR	ddPTM_K562_Methotrexat_30min_R1	2	VGDTSLDPNDFDFTVTGRGSPSRR	24	2	I6LM39;A0A087X1U4;P51608;P51608-2	I6LM39	MECP2	Methyl-CpG-binding protein 2	1	VGDTSLDPNDFDFT(0.969)VT(0.02)GRGS(0.009)PS(0.001)RR;VGDTSLDPNDFDFT(0.419)VT(0.419)GRGS(0.149)PS(0.012)RR	74.28699999999999	0.0010245999999999999	106016000.0	4196.0	3917.3	5360.9	4702.799999999999	4209.0	3571.1	3726.7	4701.2	4825.8	6101.200000000001	True	False	4011.548864148538	4564.567242284868	4235.720351033161	4290.512825568033	4762.557275053628	4261.164534018308	4562.507340593156	4535.8561313344735	4601.449611320168	4996.213558163218	0.8029178131495489	0.9136053111314485	0.8477860887496489	0.8587528886866427	0.9532333275210335	0.8528787819840231	0.9131930185687444	0.9078587371277244	0.9209873752898226	1.0	12.286619429485905	-15.99999992568967	0.059658073143487866	1.4304576188724398	0.7049489599963523	0.5773482510185741	0.03542109305044878	297.20983837892436	1.293025848044062	18.635320164969478	3.131376715475715	1.0000001711058735e-16	15.99999992568967	-0.7255086588760875	
VGDTSLDPNDFDFTVTGRGS(ph)PSRR	ddPTM_K562_Methotrexat_30min_R1	1	VGDTSLDPNDFDFTVTGRGSPSRR	24	2	I6LM39;A0A087X1U4;P51608;P51608-2	I6LM39	MECP2	Methyl-CpG-binding protein 2	1	VGDTSLDPNDFDFT(0.033)VT(0.387)GRGS(0.547)PS(0.033)RR	63.606	0.019029	135830000.0	1988.5	1290.5	2077.0	2146.7	1609.8	1522.4	1957.6	2030.1	2369.7	2917.1	True	False	1901.0879209626698	1503.7331902505869	1641.066083884398	1958.5021439667628	1821.5169164602821	1816.5822538124028	2396.641631992153	1958.700232328365	2259.5331642308843	2388.784922723057	0.7958388814659609	0.6294971037143144	0.6869877937833311	0.8198737882748354	0.7625286391978199	0.7604628765580197	1.0032889981824482	0.8199567125932694	0.9458922579162822	1.0	11.222061249427805	-8.608990425038366	0.5276407325409528	0.9821686987634587	0.6878505715709718	0.6285528967398439	0.07293219777269307	0.6043405029036498	0.35785135025660647	0.06745415229162492	0.06364520090602577	2.4604218488734808e-09	8.608990425038366	-0.29431812719248684	
VGDVT(ph)PQVK	ddPTM_K562_Methotrexat_30min_R1	1	VGDVTPQVK	9	0	Q13428;Q13428-3;Q13428-4;E7ETY2;Q13428-6;Q13428-7;A0A6I8PRA0;H0Y8Y7;Q13428-5	Q13428	TCOF1	Treacle protein	1	VGDVT(1)PQVK	94.76700000000001	0.025503	17696000.0	2340.4	1945.9	3397.8	2995.3	1940.4	1554.6	1882.5	2529.5	2651.8	3184.1	True	False	2237.518818315833	2267.426900355381	2684.6482136843574	2732.70669950326	2195.596611193648	1855.0044480929846	2304.698545272388	2440.5360512657503	2528.518396804431	2607.428635440158	0.8581323330976302	0.8696026689039634	1.0296152221367179	1.0480465936288048	0.8420543447867026	0.711430572971307	0.8838970754355214	0.9359934220611048	0.9697363764579482	1.0	11.348412051805777	-9.664574422524009	2.4851551101500964	0.9921778270055583	0.8941956384991332	0.14795708418415798	0.08974298102023012	0.6750020682028302	7.714098858607853	0.09135815939838668	0.027408535944937	2.1648388716509505e-10	9.664574422524009	-0.09798218850642515	
VGEDEDGS(ph)DEEVVHNEDIHFEPIVSLPEVEVK	ddPTM_K562_Methotrexat_30min_R1	3	VGEDEDGSDEEVVHNEDIHFEPIVSLPEVEVK	32	0	P49792	P49792	RANBP2	E3 SUMO-protein ligase RanBP2	1	VGEDEDGS(0.998)DEEVVHNEDIHFEPIVS(0.002)LPEVEVK;VGEDEDGS(0.993)DEEVVHNEDIHFEPIVS(0.007)LPEVEVK;VGEDEDGS(0.998)DEEVVHNEDIHFEPIVS(0.002)LPEVEVK	54.562	0.0020510000000000003	105904000.0	10043.0	6689.0	15041.0	9946.5	7005.3	6180.8	5809.2	8805.7	9909.3	13392.800000000001	True	False	9601.52174514866	7794.243556440274	11884.099647426694	9074.505787937494	7926.619738401805	7375.152124516354	7112.060976996736	8495.998539881726	9448.618805888134	10967.234141114594	0.8754733984527537	0.7106845222917936	1.0836004314775138	0.8274197186981236	0.722754674187728	0.6724714754532287	0.6484826425228432	0.7746710274043883	0.8615316026186232	1.0	13.42091211367551	-5.911075535372971	17.438618866896167	0.800600071096778	3.537042041266731	0.014773165839987668	0.13366194560768593	539.3493551817484	108071.1662304246	0.033484565941452736	1253.87759802784	1.2272257653612467e-06	5.911075535372971	2.736441970169953	
VGET(ph)FHASQPS(ph)MTVDGFTDPS(ph)NSER	ddPTM_K562_Methotrexat_30min_R1	1	VGETFHASQPSMTVDGFTDPSNSER	25	0	P84022;H0YNV1;H0YKE2;H3BVD1;P84022-4;P84022-3;P84022-2	P84022	SMAD3	Mothers against decapentaplegic homolog 3;Mothers against decapentaplegic homolog	3	VGET(0.757)FHAS(0.453)QPS(0.518)MT(0.273)VDGFT(0.075)DPS(0.839)NS(0.086)ER	43.312	0.024994	47752000.0	2404.9	1591.7	3720.4	2516.3	2109.2	1528.6	1684.4	2673.8	2390.4	3380.3	True	False	2299.1834755459536	1854.7013707259666	2939.5388822742016	2295.6998858077827	2386.5967699080825	1823.980316065184	2062.1695775069393	2579.760938475733	2279.2708257490413	2768.0949142232857	0.8306013871605604	0.6700280980959018	1.0619357259644482	0.8293429080093322	0.8621802517121239	0.658929831738441	0.7449779149229694	0.9319626018675019	0.8234077574571151	1.0	11.434677696542652	-10.360710441718739	1.1619078844058062	0.9985529522447956	0.8167245761412443	0.18286873169725748	0.11253034557928383	2.2801823203148484	5.02928317642881	0.11037267090531054	0.03409227588814301	4.358023404626678e-11	10.360710441718739	-0.1818283761035513	
VGGS(ph)DEEASGIPSR	ddPTM_K562_Methotrexat_30min_R1	6	VGGSDEEASGIPSR	14	0	H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55-2;Q9NQ55;Q9NQ55-3	H7C446	PPAN;PPAN-P2RY11	Suppressor of SWI4 1 homolog	1	VGGS(1)DEEASGIPSR;VGGS(1)DEEASGIPSR;VGGS(1)DEEASGIPSR;VGGS(1)DEEASGIPSR;VGGS(0.75)DEEAS(0.249)GIPS(0.001)R;VGGS(1)DEEASGIPSR	230.23	7.1031e-37	1669022000.0	6858.93	5861.990000000001	9039.609999999999	7339.69	5884.21	5643.73	5998.7	6872.550000000001	6830.469999999999	7352.529999999999	True	False	6557.419649850889	6830.584210706735	7142.319394579806	6696.230773303872	6658.086753015755	6734.300948048257	7344.061175843548	6630.838521101582	6512.922940576495	6020.915569527599	1.0891067270630046	1.1344759998424396	1.186251378565701	1.1121615468574424	1.1058262943783728	1.118484534500229	1.2197582063785297	1.1013006982959301	1.0817163711012643	1.0	12.555767171511132	-10.012980006387863	1.985479753434837	1.0015382435241207	1.1369831767800866	0.5478994398213463	0.03787234212034452	0.26369372460501167	2.3819141976537512	0.03688832039331237	0.010348799820460913	9.705546476347789e-11	10.012980006387863	0.13544493325596596	
VGHMSS(ph)VELDDELLDPDMDPPHPFPK	ddPTM_K562_Methotrexat_30min_R1	1	VGHMSSVELDDELLDPDMDPPHPFPK	26	0	P51798;H3BNG8	P51798	CLCN7	H(+)/Cl(-) exchange transporter 7	1	VGHMS(0.2)S(0.8)VELDDELLDPDMDPPHPFPK	53.964	0.006388800000000001	12516000.0	1146.1	1099.5	1725.6	1639.1	922.26	866.97	960.08	1503.8	1522.6	2124.5	True	False	1095.7188163013916	1281.1736866954836	1363.4201417192673	1495.402647866922	1043.5533553079026	1034.499682466985	1175.4023794661966	1450.9105016380452	1451.8146583356306	1739.73246317409	0.6298202967956839	0.7364199460634426	0.7836952925691505	0.8595589721528818	0.5998355364387296	0.5946314760256707	0.6756224904383918	0.8339848409742853	0.8345045511692286	1.0	10.764649749513042	-9.867269398609924	1.4302932142964684	0.9900491235933403	0.7027858786851969	0.5639446213445938	0.08259598726462683	0.31879395267502647	1.4138599482861547	0.08603508589474315	0.02615937274047015	1.357471128072537e-10	9.867269398609924	-0.28726324490814337	
VGPDGKELIPQES(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	VGPDGKELIPQESPR	15	1	Q96DF8	Q96DF8	DGCR14	Protein DGCR14	1	VGPDGKELIPQES(1)PR;VGPDGKELIPQES(1)PR	91.54700000000001	0.0075041	38435000.0	4640.4	4052.5	6807.299999999999	6114.9	2936.7	3296.2	3326.7	3905.5	4235.9	6374.0	True	False	4436.41357225807	4722.106744277804	5378.540757258672	5578.816210994719	3322.927524269419	3933.1439996166855	4072.7971583307603	3768.141351341527	4038.9739335635722	5219.606834677167	0.8499516750541735	0.9046862903362465	1.0304494050252224	1.0688192401640475	0.6366241039829089	0.7535326173393576	0.7802881112179905	0.7219205336132537	0.7738080781736472	1.0	12.349725424977608	-7.757744775122203	24.99971858198395	0.7627130808280231	0.9640611035063253	0.4339048323797493	0.1031076673894962	84.77546121169813	573633.0686003976	0.030523896977571848	0.03788508672810255	1.7468484339754292e-08	7.757744775122203	0.2013480226783022	
VGRGET(ph)WTWT(ph)RLQAFT(ph)FS(ph)PAQLPR	ddPTM_K562_Methotrexat_30min_R1	1	VGRGETWTWTRLQAFTFSPAQLPR	24	2	Q13164-4;Q13164-3	Q13164-4			4	VGRGET(0.529)WT(0.529)WT(0.945)RLQAFT(0.999)FS(0.999)PAQLPR	45.047	0.027852999999999996	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
VGRYRWWPAEICHPRAVPS(ph)NIDK	ddPTM_K562_Methotrexat_30min_R1	1	VGRYRWWPAEICHPRAVPSNIDK	23	3	Q96L73-2;Q96L73-3;Q96L73	Q96L73-2	NSD1	Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific	1	VGRYRWWPAEICHPRAVPS(1)NIDK	58.123000000000005	0.014472	0.0	302.81	322.81	515.04	408.38	279.9	298.18	331.19	499.56	335.09	395.48	True	False	289.49883497445643	376.14886566818456	406.9401424380455	372.5779594508535	316.7117560673581	355.799064924975	405.46778815870533	481.99019164669676	319.5117390395944	323.85473972044645	0.8939156957355441	1.161474017619377	1.256551448928365	1.1504477586848512	0.9779438656378653	1.098637819017573	1.2520051073166563	1.4882913001759797	0.9865896645990082	1.0	8.339203048326409	-8.752584193952885	24.097868953775027	1.2224124548564528	1.0983330982328805	0.04753773718575738	0.1626846263156505	275.70112594878964	750275.7060732229	0.06238910061203574	0.04754868389538613	1.7677294858628428e-09	8.752584193952885	-0.12407935662357228	
VGS(ph)LDNVGHLPAGGAVK	ddPTM_K562_Methotrexat_30min_R1	3	VGSLDNVGHLPAGGAVK	17	0	E7EVA0;P27816;P27816-6;P27816-2;P27816-4;H0Y2V1;H7C4C5;F8W9U4;P27816-5	E7EVA0	MAP4	Microtubule-associated protein;Microtubule-associated protein 4	1	VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK	99.846	0.0012613	46608000.0	18088.1	12223.199999999999	27008.999999999996	19576.4	12982.600000000002	11592.1	10217.0	13922.4	15125.699999999999	22628.0	True	False	17292.9687820794	14242.876041124344	21340.179999823653	17860.16740632178	14690.039458092491	13832.10926459455	12508.422330437188	13432.741300708565	14422.509508463974	18529.849930196895	0.9332492625263072	0.76864497525766	1.1516650205054788	0.963859258094488	0.7927770334584894	0.7464771337437147	0.6750417503410551	0.7249244516987748	0.7783392506034572	1.0	14.17756357684353	-7.811249571237315	4.948335780986975	0.7625220454167778	0.9556021975622438	0.3169774353337753	0.11840878117665632	0.2171663342469826	11.39950648846445	0.03693287019573075	0.043142562160056575	1.544366700249057e-08	7.811249571237315	0.19308015214546603	
VGS(ph)PLTLTDAQTR	ddPTM_K562_Methotrexat_30min_R1	1	VGSPLTLTDAQTR	13	0	A0A0D9SF60;Q99569-2;Q99569	A0A0D9SF60	PKP4	Plakophilin-4	1	VGS(0.757)PLT(0.237)LT(0.005)DAQT(0.001)R	103.3	0.0039622	23578000.0	1143.9	1010.1	1674.3	1206.0	1043.0	1022.2	974.99	1119.6	1301.8	1294.8	True	False	1093.615525667186	1177.0018562356593	1322.8873106632877	1100.2718524357927	1180.1727816300631	1219.7256830314218	1193.6563265100276	1080.2230334046785	1241.2796021419442	1060.299173131471	1.031421652850411	1.1100658060116377	1.247654760265721	1.0376994345721	1.113056401001011	1.1503599304233192	1.125773137203061	1.018790791106971	1.1706880789843195	1.0	10.050255676521566	-15.550583906918122	0.36812511082311	8.31007214159121e-06	1.1153716344937183	0.19631633296434248	0.06675475160397436	605.7666756435633	6.601272156034115	475.40774058704517	0.047123619194109255	2.8145961746843147e-16	15.550583906918122	1.1153633244215768	
VGSAQPS(ph)PPDDLDAGGLAQR	ddPTM_K562_Methotrexat_30min_R1	3	VGSAQPSPPDDLDAGGLAQR	20	0	Q8N3D4;E9PIH6;A0A0U1RQH4;H0YDZ9	Q8N3D4	EHBP1L1	EH domain-binding protein 1-like protein 1	1	VGS(0.086)AQPS(0.914)PPDDLDAGGLAQR;VGS(0.433)AQPS(0.567)PPDDLDAGGLAQR;VGS(0.255)AQPS(0.745)PPDDLDAGGLAQR	168.17	1.0615e-12	43008000.0	3818.7	3133.1400000000003	4679.6	4085.7999999999997	3511.1299999999997	3180.1099999999997	3114.1200000000003	3658.42	3947.5	4480.7	True	False	3650.834520382273	3650.8381307258605	3697.415910517784	3727.604257613734	3972.905137837738	3794.6212501125565	3812.5406819674145	3529.7512949878037	3763.9815866149365	3669.2018111292746	0.9949941999125557	0.9949951838714038	1.0076894378779961	1.0159169349331822	1.0827709519240079	1.0341816682317295	1.039065409376876	0.9619943182960132	1.025831169928615	1.0	11.841250541635672	-7.124210346935989	2.8090871616461666	1.0249123912372338	0.9958957101310323	0.131654075650389	0.028783594228498993	0.5803167980467845	8.81202490081004	0.008840313579302449	0.017762527581323406	7.512589398397639e-08	7.124210346935989	-0.02901668110620148	
VGSPLTLT(ph)DAQTR	ddPTM_K562_Methotrexat_30min_R1	1	VGSPLTLTDAQTR	13	0	A0A0D9SF60;Q99569-2;Q99569	A0A0D9SF60	PKP4	Plakophilin-4	1	VGS(0.132)PLT(0.094)LT(0.774)DAQTR	129.76	0.0010316	28694000.0	1202.4	937.02	1402.6	1091.6	951.56	931.5	906.66	807.54	887.54	1176.4	True	False	1149.543935713108	1091.8466283832659	1108.2134276631	995.9011228183343	1076.706818876225	1111.4991916882902	1110.0015846250546	779.1383604819703	846.2784591220321	963.3425604509284	1.1932867734765307	1.1333939485370461	1.1503835428431184	1.033797491883018	1.1176780338369274	1.1537943378812325	1.1522397433634377	0.8087863990118588	0.8784813355758931	1.0	9.911905095199456	-9.25400220741521	24.97504305328879	0.8827253974613037	1.1304911215551954	0.775923112630569	0.058408592093866805	234.27305750035077	786724.011773507	0.0279178097805388	0.0157071384505522	5.571829168969338e-10	9.25400220741521	0.24776572409389164	
VGSRMPSLT(ph)ASRAGSR	ddPTM_K562_Methotrexat_30min_R1	1	VGSRMPSLTASRAGSR	16	2	P0CW27	P0CW27	CCDC166	Coiled-coil domain-containing protein 166	1	VGSRMPS(0.005)LT(0.738)AS(0.24)RAGS(0.017)R	54.093999999999994	0.031013	25565000.0	0.0	0.0	0.0	0.0	68.149	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	77.111788010841	0.0	0.0	0.0	0.0	0.0											0.0														
VGVASEETPQT(ph)SSSSARPGTPSDHQSQEASQFER	ddPTM_K562_Methotrexat_30min_R1	1	VGVASEETPQTSSSSARPGTPSDHQSQEASQFER	34	1	Q6Y7W6-3	Q6Y7W6-3	GIGYF2	PERQ amino acid-rich with GYF domain-containing protein 2	1	VGVASEET(0.001)PQT(0.199)S(0.199)S(0.199)S(0.199)S(0.199)ARPGT(0.002)PSDHQSQEASQFER	103.05	5.0124999999999995e-11	15891000.0	1538.0	1038.1	1534.5	1350.5	1409.5	1070.3	957.21	1501.4	1272.3	1321.9	True	False	1470.391361549202	1209.6283803170359	1212.4294201832502	1232.103761786516	1594.8739556160817	1277.1203272828523	1171.8887089084647	1448.5949109983792	1213.1510507030239	1082.491100527102	1.358340369572755	1.1174487990968485	1.1200363860662474	1.1382114468992517	1.4733367829439734	1.179797530585682	1.0825850746835997	1.3382049148422641	1.1207030248214505	1.0	10.080139448849012	-10.00372746387959	24.436481964086756	0.9999999888123039	1.2185690096480992	0.25904896332788774	0.12047471606812414	127.55238634909769	836216.0757507381	0.11667086936837809	0.030124288933779143	9.914539243388874e-11	10.00372746387959	0.21856902083579532	
VGVEASEETPQT(ph)SSSSARPGTPSDHQSQEASQFER	ddPTM_K562_Methotrexat_30min_R1	1	VGVEASEETPQTSSSSARPGTPSDHQSQEASQFER	35	1	I1E4Y6;Q6Y7W6;Q6Y7W6-4;Q6Y7W6-5;C9JHW1;E7ESB6	I1E4Y6	GIGYF2	PERQ amino acid-rich with GYF domain-containing protein 2	1	VGVEASEET(0.008)PQT(0.445)S(0.115)S(0.115)S(0.115)S(0.141)ARPGT(0.053)PS(0.007)DHQS(0.001)QEAS(0.001)QFER	71.903	3.0546e-06	482790000.0	1992.8	1549.2	2094.2	2002.2	1710.1	1571.4	1320.9	1479.9	1929.1	1829.3	True	False	1905.198898111346	1805.1789681024493	1654.6560389363062	1826.6702346160407	1935.008124511574	1875.0508103263317	1617.145449375988	1427.8510781846946	1839.4165620617803	1497.9960437205743	1.2718317288605125	1.205062573876313	1.1045797122578744	1.2194092516286879	1.2917311314825586	1.25170611643891	1.0795391991553476	0.9531741316474638	1.2279181709273541	1.0	10.548818098236959	-8.814778327796583	6.423943518803653	1.0593312002673994	1.2205473205109845	0.47915434636877186	0.08112658460256958	0.18415859892563863	16.244626612493487	0.03413662500673857	0.023116854342717666	1.5318691574625283e-09	8.814778327796583	0.16121612024358511	
VGVEASEETPQTSSSSARPGT(ph)PSDHQSQEASQFER	ddPTM_K562_Methotrexat_30min_R1	3	VGVEASEETPQTSSSSARPGTPSDHQSQEASQFER	35	1	I1E4Y6;Q6Y7W6;Q6Y7W6-4;Q6Y7W6-5;C9JHW1;E7ESB6	I1E4Y6	GIGYF2	PERQ amino acid-rich with GYF domain-containing protein 2	1	VGVEASEETPQT(0.182)S(0.063)S(0.063)S(0.063)S(0.063)ARPGT(0.534)PS(0.033)DHQSQEASQFER;VGVEASEET(0.002)PQT(0.149)S(0.149)S(0.149)S(0.149)S(0.107)ARPGT(0.287)PS(0.007)DHQSQEASQFER;VGVEASEETPQT(0.102)S(0.135)S(0.135)S(0.102)S(0.135)ARPGT(0.375)PS(0.017)DHQSQEASQFER	94.807	1.1138999999999999e-10	964150000.0	6112.299999999999	5957.1	8622.3	7295.6	5467.6	5062.8	5412.3	6078.9	6314.0	7213.0	True	False	5843.610610661366	6941.409521613153	6812.597060701224	6656.006075149732	6186.685235705211	6041.1144473209615	6626.146048646881	5865.101641446682	6020.463518147365	5906.655804600942	0.9893264148064176	1.1751843600241947	1.1533763412106401	1.126865403256626	1.0474091330810478	1.0227639204260528	1.1218100847328023	0.9929648578605356	1.0192677070259915	1.0	12.528125829674481	-8.757285038988782	0.6857196173610787	1.0006472365751142	1.1146846986834866	0.29462762512925555	0.057166892782155324	0.8986208210548856	0.8428763352578944	0.05025756482479435	0.03347724285986121	1.7486985946291065e-09	8.757285038988782	0.1140374621083724	
VGVSSKPDSS(ph)PVLSPGNK	ddPTM_K562_Methotrexat_30min_R1	2	VGVSSKPDSSPVLSPGNK	18	1	Q8N4C8-5;Q8N4C8-2;Q8N4C8-3;Q8N4C8-4;Q8N4C8	Q8N4C8-5	MINK1	Misshapen-like kinase 1	1	VGVSS(0.002)KPDS(0.27)S(0.724)PVLS(0.004)PGNK;VGVS(0.001)S(0.001)KPDS(0.218)S(0.779)PVLS(0.001)PGNK	79.029	0.007620999999999999	47033000.0	6976.2	4628.799999999999	12592.0	8201.9	4588.799999999999	4065.5	3842.2	5135.9	6292.8	9247.6	True	False	6669.534601066024	5393.630523852705	9949.11127986151	7482.852161271248	5192.307632161105	4851.100336885389	4703.911155721422	4955.267485944166	6000.249101520068	7572.770028923844	0.8807258870389628	0.712240105437242	1.3138007944069794	0.9881261589472335	0.6856549997331659	0.6405978681984051	0.6211612313268529	0.6543533564359874	0.7923453476868298	1.0	12.88660540204637	-7.760111760963351	24.99441916971231	0.7049225208225761	0.9793371682631642	0.3093536261265698	0.17372500319718717	39.91799338175773	751503.8251505026	0.05320221051345036	0.06494577910197963	1.7373536821357627e-08	7.760111760963351	0.2744146474405881	
VHAYFAPVT(ph)PPPSVGGSR	ddPTM_K562_Methotrexat_30min_R1	2	VHAYFAPVTPPPSVGGSR	18	0	J3KTA1;Q96IG2-2;Q96IG2	J3KTA1	FBXL20	F-box/LRR-repeat protein 20	1	VHAYFAPVT(1)PPPSVGGSR;VHAYFAPVT(1)PPPSVGGSR	114.1	0.0012955	53120000.0	2695.7	2336.7	3709.6000000000004	2816.0	2685.9	2457.8	2638.3	3099.0	2905.7	3288.9	True	False	2577.20025574004	2722.799957891165	2931.0056546834694	2569.1256521220494	3039.142928264801	2932.735065304861	3230.005934657182	2990.006413470079	2770.614641222805	2693.248339907395	0.9569114802939617	1.0109724816482337	1.0882790165515333	0.9539133892904902	1.128430261417816	1.0889211447191316	1.1992974753929462	1.110185930189003	1.0287260183804923	1.0	11.395131549122617	-7.772993827903001	24.99983238218455	1.1032543597161242	1.0092486096084414	0.32655178177672406	0.06194956397094412	249.05899887484048	538875.7256065126	0.01910688933582307	0.021841036995804742	1.68657699447716e-08	7.772993827903001	-0.09400575010768275	
VHDRS(ph)EEEEEEEEEEEEEQPR	ddPTM_K562_Methotrexat_30min_R1	2	VHDRSEEEEEEEEEEEEEQPR	21	1	Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9;V9GYQ9	Q5TAQ8	DCAF8	DDB1- and CUL4-associated factor 8	1	VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR	171.84	1.1584000000000001e-17	236126000.0	2241.3	1751.0	2758.7	2096.0	1772.62	1992.12	1697.02	2108.5	2149.12	1968.73	True	False	2142.7751356568433	2040.3229880889407	2179.6865698661004	1912.2469342499355	2005.7506003577005	2377.068995970021	2077.619933757317	2034.342859890822	2049.2078802852157	1612.1739196162516	1.329121572793394	1.2655725063302117	1.3520170146313586	1.186129431187617	1.2441279293459433	1.4744494790833973	1.2887070733980466	1.2618631495881412	1.2710836314564573	1.0	10.654791673337694	-10.628612513282722	1.2170220349781777	0.9997556179957654	1.3023862835287376	0.6064600263325448	0.07234418005473006	2.409380249533932	4.0145269783093624	0.07259829969084292	0.021681533757312094	2.3517301484206763e-11	10.628612513282722	0.30263066553297224	
VHFTAEEK	ddPTM_K562_Methotrexat_30min_R1	1	VHFTAEEK	8	0	P02100	P02100	HBE1	Hemoglobin subunit epsilon	0		135.83	2.4275e-05	21461000.0	5723.2	4481.9	8350.7	6832.9	4448.6	4360.7	4038.9	5310.4	5630.7	7140.9	False	True	5471.614980766185	5222.4577957257725	6598.002189067624	6233.870265761632	5033.668874745442	5203.343558985642	4944.726137848956	5123.630222036625	5368.929986004489	5847.613813264231	0.9357004678309703	0.8930921162884581	1.1283238599138123	1.0660536869964377	0.8608073370590059	0.8898233920959039	0.8455972462874957	0.8761916203177811	0.9181403145717428	1.0	12.513632320971979	-7.770908371260386	24.99436294807156	0.8891645891461479	1.0064947442729528	0.34190361568491057	0.07228877370557159	222.4026528929291	587052.5437365788	0.023538518922827954	0.027037347457984237	1.6946953145818923e-08	7.770908371260386	0.11733015512680489	
VHIDIGADGR	ddPTM_K562_Methotrexat_30min_R1	2	VHIDIGADGR	10	0	P31942-4;P31942-3;P31942;P31942-2;P31942-5;P31942-6	P31942-4	HNRNPH3	Heterogeneous nuclear ribonucleoprotein H3	0	;	169.76	0.00014325	29562900.0	6418.6	5703.7	7448.1	6897.8	5966.200000000001	5257.9	5518.200000000001	7113.5	6965.8	8470.5	False	True	6136.446029414633	6646.139478676692	5884.845594308805	6293.080583525382	6750.859875130664	6273.914761114178	6755.796819400853	6863.314173029817	6641.961478414777	6936.410369176808	0.8846717109880118	0.9581525781995271	0.848399284514535	0.9072532114722944	0.9732497813464626	0.904490136424663	0.9739615247421716	0.9894619562199193	0.9575502493234155	1.0	12.759973537902201	-8.553887073181844	0.6913156718012957	0.99046104328161	0.8996204021764589	0.48847536497251376	0.03409634775596505	0.6493558299011376	0.6442215225177983	0.027849720566853368	0.021662138071913604	2.7932700629759784e-09	8.553887073181844	-0.09084064110515111	
VHIEIGPDGR	ddPTM_K562_Methotrexat_30min_R1	5	VHIEIGPDGR	10	0	P31943;E9PCY7;G8JLB6;P55795;H0YB39;H0YBD7;H0YBG7;P52597	P31943	HNRNPH1;HNRNPH2;HNRNPF	Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed	0	;;;;	164.66	1.2116e-17	144862000.0	24696.699999999997	22737.299999999996	29073.300000000003	26544.5	23904.0	22890.5	21065.7	25695.399999999998	25925.300000000003	26592.800000000003	False	True	23611.062638993608	26494.252356981542	22971.211640152287	24217.38489799494	27047.794987617483	27313.765160859693	25790.21946621227	24791.678217708646	24720.03846167655	21776.586230499368	1.0842407707561137	1.216639379402581	1.0548582499115393	1.1120836223667185	1.2420585440400884	1.2542721284112561	1.184309569609748	1.1384556769043288	1.1351659162745493	1.0	14.410490189695134	-10.33620278392564	1.5849126314418898	1.0002193691269639	1.1648791764302253	0.37302880329666965	0.06236041328435443	1.5564235444394445	5.752355579874757	0.06370644429900271	0.018305706973159846	4.6110222309719927e-11	10.33620278392564	0.16465980730326146	
VHS(ph)PPASLVPR	ddPTM_K562_Methotrexat_30min_R1	1	VHSPPASLVPR	11	0	Q9BTE3;Q9BTE3-2;Q9BTE3-3	Q9BTE3	MCMBP	Mini-chromosome maintenance complex-binding protein	1	VHS(1)PPASLVPR	95.18299999999999	0.008317299999999998	7672600.0	1399.5	1147.2	2100.5	1570.7	1216.2	1410.8	1247.6	1532.8	1361.2	1653.9	True	False	1337.9796557139846	1336.7553009341134	1659.6337550309008	1432.9991696690715	1376.1516174673848	1683.4171332623064	1527.4060584764054	1478.8905552006897	1297.9181091070934	1354.362683381326	0.9879035151600314	0.9869995071015589	1.2253983186301542	1.058061616177596	1.0160879610413218	1.2429588868023573	1.1277673825618528	1.0919457345860013	0.9583238854947539	1.0	10.40339841312466	-9.753596050241052	23.663198899725383	0.9791619286644568	1.0956214454168571	0.22110034763504172	0.08461907463886842	123.69804786767163	373212.54475653765	0.06182514136390057	0.022337753635728035	1.7636156733030545e-10	9.753596050241052	0.1164595167524003	
VHVGDEDFVHLR	ddPTM_K562_Methotrexat_30min_R1	2	VHVGDEDFVHLR	12	0	P04080	P04080	CSTB	Cystatin-B	0	;	190.26	3.8307e-09	52857000.0	8241.8	6737.9	8865.0	8079.9	7705.4	7262.2	6522.2	9481.6	9505.900000000001	9210.5	False	True	7879.500340452669	7851.223450282399	7004.35764739297	7371.547711854036	8718.79515970498	8665.517369703379	7984.969376879459	9148.126753777962	9063.972783838615	7542.389198430193	1.044695537866521	1.0409464751456323	0.9286656340739876	0.977349155276724	1.1559725877735976	1.1489088061786767	1.0586790427814812	1.2128950804715797	1.2017376119658625	1.0	12.880805882258866	-7.761555333697309	24.999999593639195	1.1377531273708528	0.9960415922477615	0.48011100227332437	0.06685652809012214	2.592178948896565	558924.1435789475	0.020399014758449754	0.02463717520444573	1.7315883940709795e-08	7.761555333697309	-0.14171153512309131	
VHVQFFDDS(ph)PTR	ddPTM_K562_Methotrexat_30min_R1	4	VHVQFFDDSPTR	12	0	F8WAX8;P52701-2;P52701;A0A087WWJ1;C9JH55;C9J8Y8;C9J7Y7;A0A494C0M1	F8WAX8	MSH6	DNA mismatch repair protein Msh6	1	VHVQFFDDS(0.764)PT(0.236)R;VHVQFFDDS(0.793)PT(0.207)R;VHVQFFDDS(0.988)PT(0.012)R;VHVQFFDDS(0.999)PT(0.001)R	160.63	8.084899999999999e-09	117717000.0	18454.6	16152.300000000001	18896.600000000002	17772.8	15546.599999999999	14167.7	14542.2	22003.899999999998	20875.2	24001.9	True	False	17643.357880914104	18821.193032843526	14930.46189731821	16214.686218052117	17591.250399702712	16905.407512702295	17803.658531240435	21230.010365070746	19904.71650839876	19654.92332683369	0.8976558996201569	0.9575816053755895	0.7596296179357028	0.8249681745598659	0.8950047836455526	0.8601105805191493	0.905811650098587	1.0801370227726446	1.01270893696258	1.0	14.262603115419695	-9.11876574302743	4.402454411603548	1.0337495433843917	0.8657499434796794	0.6663189550001785	0.052215616018495954	0.1417406395203394	4.425050757177382	0.02706088394299691	0.015189343484238274	7.607365049865789e-10	9.11876574302743	-0.16799959990471236	
VIDPATATSVDLR	ddPTM_K562_Methotrexat_30min_R1	1	VIDPATATSVDLR	13	0	P50991-2;P50991	P50991-2	CCT4	T-complex protein 1 subunit delta	0		141.91	5.4222e-05	6096800.0	908.68	668.18	1004.9	1142.7	729.94	827.61	842.16	922.7	915.0	1033.5	False	True	868.7355152227102	778.585387881935	793.9852227710315	1042.5212651562028	825.9399043365751	987.5339195202853	1031.0358177352432	890.2481180086615	872.461849715685	846.3231351802406	1.026482059996737	0.9199623116956628	0.9381584760789239	1.231824136456081	0.9759155457338118	1.1668520904961097	1.2182531410011195	1.0519009595774151	1.0308850289551375	1.0	9.725064794625203	-7.226059241681442	24.986158393990547	1.1016589594251702	0.9573770392204873	0.3365515734341249	0.08658106694484004	650.0212527441685	459057.43779739446	0.02313907397386268	0.040076334029549535	5.942110973379063e-08	7.226059241681442	-0.1442819202046829	
VIEDNEY(ph)TAR	ddPTM_K562_Methotrexat_30min_R1	2	VIEDNEYTAR	10	0	P07948-2;P07948;H0Y3C5;J3KPD6;P08631-3;P08631-2;P08631-4;P08631	P07948-2	LYN;HCK	Tyrosine-protein kinase Lyn;Non-specific protein-tyrosine kinase;Tyrosine-protein kinase HCK	1	VIEDNEY(0.998)T(0.002)AR;VIEDNEY(0.998)T(0.002)AR	218.94	7.9734e-25	47491000.0	2451.3	2252.2	4187.6	3238.8	2760.2	2021.8000000000002	2008.8899999999999	3018.3	3407.4	3344.9	True	False	2343.5437871037443	2624.3377691455826	3308.679986939967	2954.859432561399	3123.2146805899315	2412.4842359156037	2459.4347201127493	2912.144678211274	3248.9907177281175	2739.1061972562998	0.8555870485968082	0.9581000443773673	1.2079414774988266	1.078767751144959	1.1402313220708216	0.8807560065878914	0.8978968112212331	1.0631733377582449	1.186149964168077	1.0	11.419489486187285	-9.518166124379247	24.956176246170653	1.1036038831671204	1.0101681464466297	0.09167377819879718	0.11586328310180947	539.3516349265425	2856283.718680365	0.07946518920787422	0.03175692655306325	3.0327308956609713e-10	9.518166124379247	-0.09343573672049077	
VIEDRDSQLR	ddPTM_K562_Methotrexat_30min_R1	3	VIEDRDSQLR	10	1	Q8N1F7;Q8N1F7-2	Q8N1F7	NUP93	Nuclear pore complex protein Nup93	0	;;	139.38	0.00027089999999999997	25680300.0	5383.1	4967.7	5821.3	5799.4	4805.8	4708.4	4907.0	5619.9	5394.0	6000.8	False	True	5146.465369541942	5788.527988537654	4599.488682771426	5290.975606149366	5437.846935721725	5618.231663065105	6007.519660903911	5422.244931610357	5143.234117340336	4913.9969710591095	1.0473073955584324	1.177967349721434	0.9359974598804245	1.076715276242632	1.1066036401218438	1.1433119914712142	1.2225322270821661	1.1034286271531228	1.046649834672531	1.0	12.262681253098968														
VIGQDHDFSES(ph)SEEEAPAEASSGALR	ddPTM_K562_Methotrexat_30min_R1	1	VIGQDHDFSESSEEEAPAEASSGALR	26	0	P23497-2;P23497-3;P23497;P23497-4;E9PHV6;P23497-7;P23497-6;P23497-5;H7C1G8;H7C4B4	P23497-2	SP100	Nuclear autoantigen Sp-100	1	VIGQDHDFS(0.074)ES(0.668)S(0.208)EEEAPAEAS(0.022)S(0.028)GALR	51.473	0.01492	11429000.0	672.72	827.81	857.68	825.2	628.05	743.05	614.12	536.99	769.85	768.03	True	False	643.148034292184	964.591532135869	677.6646888906939	752.8559972056523	710.649583415878	886.6338962791025	751.8520428274526	518.1037573311703	734.0598415340114	628.9323246371359	1.0226029241910086	1.5336968610929522	1.0774842734974295	1.1970381672463957	1.1299301301231244	1.4097445170919591	1.1954418836100298	0.8237830002299398	1.1671523513400732	1.0	9.296760976095285	-9.080794274281425	8.837352649958643	0.9979672602428485	1.2355355241642922	0.2936108069623391	0.16161242300677248	0.4567428900317642	46.76051804575863	0.07193660876580411	0.041510735823741374	8.302439617511964e-10	9.080794274281425	0.2375682639214437	
VILHLKEDQTEYLEER	ddPTM_K562_Methotrexat_30min_R1	2	VILHLKEDQTEYLEER	16	1	P08238;Q58FF7;Q58FF6;P07900;P07900-2;G3V2J8	P08238;P07900	HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1	Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha	0	;	106.42	0.0035616999999999997	17952200.0	6609.9	4834.5	8275.8	7144.6	4778.8	5131.6	4547.299999999999	6859.9	6400.299999999999	8669.0	False	True	6319.336710470782	5633.318952550532	6538.822675498559	6518.244010707107	5407.295962467637	6123.209073609908	5567.147779504456	6618.6334287716645	6102.751449983932	7098.960095672474	0.8901778042565769	0.7935414309462879	0.9210958488813911	0.9181970208116296	0.7617025436956497	0.8625501469352695	0.7842201821782585	0.9323384466981838	0.8596683694142989	1.0	12.79339198889976	-10.461526010480412	1.0199162241407267	0.9995992712814555	0.8516299009266268	0.3597558436579801	0.057235496339464155	1.7999297087432755	2.859680004141128	0.05494488977784217	0.017430698060687942	3.455206352627654e-11	10.461526010480412	-0.1479693703548287	
VINAAHSFYNGTTTLPIS(ph)DEDRTPR	ddPTM_K562_Methotrexat_30min_R1	1	VINAAHSFYNGTTTLPISDEDRTPR	25	1	P49915-2;P49915	P49915-2	GMPS	GMP synthase [glutamine-hydrolyzing]	1	VINAAHSFYNGTT(0.001)T(0.003)LPIS(0.801)DEDRT(0.195)PR	72.058	0.0006868	93011000.0	1085.0	895.55	1201.6	1149.1	1187.3	954.31	1187.9	1230.7	1449.4	1882.4	True	False	1037.3046991423175	1043.524415752742	949.4005808355765	1048.3601870928435	1343.450760910234	1138.7169013634473	1454.3168137737428	1187.4155834325993	1382.0177103583765	1541.479119171054	0.6729281546805115	0.6769630563104273	0.6159023298000471	0.6801001544909735	0.8715335447636088	0.7387170459861979	0.9434554096041317	0.7703092235664821	0.8965529880817137	1.0	10.59009963153669	-8.20470547636667	0.2701965496325376	1.0073477456989304	0.5422821829757721	0.7006084664991032	0.06865279069286351	1.7590054449261108	0.2694130113250779	0.11418969451668963	0.2765254633545283	6.2415797453396386e-09	8.20470547636667	-0.46506556272315824	
VINAAHSFYNGTTTLPISDEDRT(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	VINAAHSFYNGTTTLPISDEDRTPR	25	1	P49915-2;P49915	P49915-2	GMPS	GMP synthase [glutamine-hydrolyzing]	1	VINAAHS(0.003)FY(0.003)NGTT(0.001)T(0.001)LPIS(0.207)DEDRT(0.785)PR;VINAAHS(0.001)FY(0.007)NGT(0.002)T(0.002)T(0.002)LPIS(0.244)DEDRT(0.742)PR	67.76	0.0020259	208860000.0	3636.5	2839.7	3745.0	3478.3	3085.8	2893.3999999999996	3334.9	5155.2	4934.1	5837.0	True	False	3476.6438142221523	3308.9121583530355	2958.975678453093	3173.3628394091375	3491.63678768365	3452.5086003552287	4082.8362170671385	4973.888694004825	4704.714767958648	4779.862738313559	0.7273522284133181	0.6922609161618922	0.6190503452609781	0.6639025037210106	0.7304889238128156	0.7223028754949875	0.8541743645357592	1.0405923697632629	0.9842782158256232	1.0	12.222753474081994	-8.939208979741503	1.9588608423637623	1.0140272901954224	0.6832420293757374	0.9439641258914186	0.034603019621963556	0.07448781432199952	0.5719646582484129	0.020918796238178553	0.011430977578576227	1.150246764330221e-09	8.939208979741503	-0.33078526081968496	
VIQPMGMS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	VIQPMGMSPR	10	0	H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3	H0YE35	RIC8A	Synembryn-A	1	VIQPMGMS(1)PR	56.043	0.03234	0.0	2923.9	2458.6	2912.4	2764.8	2238.1	2488.0	2429.1	2526.5	2812.5	2687.2	True	False	2795.368856979007	2864.841860945444	2301.127040300878	2522.4142766289233	2532.449379258143	2968.770787891	2973.88750933395	2437.6415629661665	2681.7474888801785	2200.5220404996053	1.2703207718584577	1.3018919184717694	1.0457186967227248	1.1462799418524505	1.150840270013009	1.3491211327367445	1.351446363454174	1.1077560315700021	1.2186869476986997	1.0	11.103630106546891	-10.578136653883584	1.2777242907874526	1.0002222481410967	1.2181656016887594	0.30402280467430376	0.09804784587904357	4.1836473599547945	7.918676707692084	0.10173537903267708	0.030284669141844876	2.641577435191291e-11	10.578136653883584	0.2179433535476627	
VISFIENTST(ph)PVDR	ddPTM_K562_Methotrexat_30min_R1	2	VISFIENTSTPVDR	14	0	E9PGE5;Q9NUY8-2;Q9NUY8	E9PGE5	TBC1D23	TBC1 domain family member 23	1	VISFIENT(0.093)S(0.338)T(0.569)PVDR;VISFIENT(0.001)S(0.025)T(0.975)PVDR	131.32	0.0009708999999999999	12296200.0	4131.2	3208.3	2972.9	4026.6	3359.8	2792.3	3120.5	3980.0	3969.3	4990.3	True	False	3949.59739455921	3738.4170432242995	2348.928917082297	3673.594229699804	3801.672590336226	3331.872456200979	3820.351559374498	3840.0211441145257	3784.768109373189	4086.5083130043095	0.9664968457278273	0.9148193902671641	0.5748009638466677	0.8989567494600446	0.9302985089344702	0.8153348044339254	0.934869396256253	0.9396826948558017	0.9261618524864108	1.0	11.996652953990012	-9.13871842122147	0.7220684651727314	0.984668217248198	0.8365186229938119	0.17986293383976582	0.10364690026468919	1.2376029268973354	1.2293542522490764	0.09926942979387794	0.05055507945733584	7.265768874881276e-10	9.13871842122147	-0.14814959425438612	
VIY(ph)DFIEK	ddPTM_K562_Methotrexat_30min_R1	1	VIYDFIEK	8	0	O00401	O00401	WASL	Neural Wiskott-Aldrich syndrome protein	1	VIY(1)DFIEK	107.47	0.0099777	4019500.0	1667.1	1255.4	1967.2	2191.0	1340.1	1195.5	1014.5	1642.9	1411.4	1924.1	True	False	1593.8162801291767	1462.8335118485766	1554.311603378618	1998.91843174695	1516.346639177801	1426.5134553551804	1242.0274497629957	1585.1182757954145	1345.784322064172	1575.626845089792	1.0115442530673233	0.9284136763772977	0.9864718973419374	1.2686496412372534	0.9623767479611502	0.9053624973455477	0.7882751259497708	1.0060239077134292	0.8541262966279801	1.0	10.621710187170946	-7.992948285879735	24.998920944193607	0.9068556292719371	1.0456968876501738	0.29013399323193534	0.10173074898200742	234.14899969292557	830070.8483620975	0.03259304518373606	0.03687588493667612	1.0163697110701545e-08	7.992948285879735	0.1388412583782367	
VKADRDESSPYAAMLAAQDVAQR	ddPTM_K562_Methotrexat_30min_R1	2	VKADRDESSPYAAMLAAQDVAQR	23	2	P62263;A0A2R8Y811;E5RH77	P62263	RPS14	40S ribosomal protein S14	0	;	60.332	0.006074800000000001	23771600.0	3791.7	2309.3999999999996	3745.8	3821.7	2653.8	2423.2	2186.2	3742.6	3722.0	5317.1	False	True	3625.021408053385	2690.989096911821	2959.607769385741	3486.6574945720317	3002.8212156182744	2891.4491049909448	2676.511001155112	3610.970636674125	3548.965032395387	4354.121666247564	0.8325494062680784	0.6180325914574062	0.6797255557482774	0.8007717197247904	0.6896502775509585	0.664071729415598	0.6147074441908653	0.8293224014996587	0.8150817327651594	1.0	12.088166005656195	-9.966613219936095	1.4022470241575167	0.9938663015153812	0.7005198752457867	0.6051723975998985	0.0727128987316986	0.27706788489582584	1.2296001532810015	0.06824848303722712	0.02060409980986878	1.0799080537316227e-10	9.966613219936095	-0.2933464262695945	
VKEEPPS(ph)PPQSPR	ddPTM_K562_Methotrexat_30min_R1	1	VKEEPPSPPQSPR	13	1	E9PMQ6;Q00613-2;Q00613	E9PMQ6	HSF1	Heat shock factor protein 1	1	VKEEPPS(1)PPQSPR	125.39	0.0018467	9470400.0	1740.6	1238.1	2113.2	1699.2	1414.5	1330.8	1105.1	1585.5	1851.7	2219.0	True	False	1664.0853081355926	1442.6749808982972	1669.6681985866694	1550.2337741781919	1600.531543255727	1587.9582654844617	1352.9468060454271	1529.7370663300442	1765.614871167796	1817.1175974503665	0.9157829468332174	0.7939359471960113	0.9188553349158105	0.853127929834236	0.8808079045084724	0.873888551688981	0.7445565482078724	0.8418481382143063	0.971656910727828	1.0	10.827436073396767	-9.816905125841949	4.932854179281473	0.9949236771937271	0.8510078507432343	0.5316223932238262	0.05008422042434896	0.15505966393920856	7.400130171606314	0.04714955740977793	0.01266093468135172	1.5243857283632455e-10	9.816905125841949	-0.14391582645049283	
VKESSIIAPAPAEDVDT(ph)PPR	ddPTM_K562_Methotrexat_30min_R1	4	VKESSIIAPAPAEDVDTPPR	20	1	Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2	Q15910-5	EZH2	Histone-lysine N-methyltransferase EZH2	1	VKESSIIAPAPAEDVDT(1)PPR;VKESSIIAPAPAEDVDT(1)PPR;VKESSIIAPAPAEDVDT(1)PPR;VKESSIIAPAPAEDVDT(1)PPR	149.94	1.9287e-12	502530000.0	21440.8	15089.3	27041.0	21066.7	16169.4	13422.5	13903.199999999999	20283.0	20253.9	25138.800000000003	True	False	20498.288104489027	17582.550350754125	21365.46363712952	19219.8151191618	18295.959516096962	16016.208159351665	17021.34651507626	19569.63539348616	19312.300609788545	20585.919720047455	0.9957431284708116	0.8541056503602061	1.0378678207086813	0.9336388842731529	0.8887608503728677	0.7780176148143817	0.8268441122161834	0.9506320659760665	0.9381315419675612	1.0	14.329370285138946	-6.234261813785243	22.39697545847354	0.9074924119104685	0.9957436244955794	0.09943440832895412	0.0745035015306956	5289.9059057565355	4359117.103569966	0.019684392291638046	1.3146512937128518	5.830934812550491e-07	6.234261813785243	0.08825121258511093	
VKGEY(ph)DMT(ph)VPK	ddPTM_K562_Methotrexat_30min_R1	1	VKGEYDMTVPK	11	1	Q09666	Q09666	AHNAK	Neuroblast differentiation-associated protein AHNAK	2	VKGEY(1)DMT(1)VPK	83.081	0.017994	69164000.0	6081.1	5056.3	6348.0	5823.5	5074.8	4562.6	4508.7	5562.7	6174.8	5633.2	True	False	5813.782125303546	5891.767632595153	5015.6415505528	5312.962796567032	5742.2251507346555	5444.257876539981	5519.890746916133	5367.056688031623	5887.734895764388	4612.972893175937	1.260311356674996	1.2772170504862412	1.0872904885204373	1.1517437712297427	1.2447992398197794	1.1802059111584593	1.1966016004737026	1.163470241928197	1.2763428340266711	1.0	12.171481099503213	-12.321144152790628	3.4066133016455904	0.9990263403424635	1.2004492879508486	0.5225946365299325	0.05845741670456825	22697198.589145508	33134348.86321543	223920.28950742082	0.015344977305110113	4.773707965018015e-13	12.321144152790628	0.20142294760838508	
VKSMT(ph)SAHGSASALKTT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	VKSMTSAHGSASALKTTR	18	2	Q5SW79-2;H0Y4T4	Q5SW79-2	CEP170	Centrosomal protein of 170 kDa	2	VKS(0.05)MT(0.447)S(0.447)AHGS(0.051)AS(0.008)ALKT(0.101)T(0.897)R	50.387	0.027762000000000002	28943000.0	467.61	441.45	837.84	792.61	389.43	472.45	495.09	663.43	651.04	719.14	True	False	447.0544243004044	514.3921091329888	661.9888337610522	723.1231119064128	440.64687090143354	563.7442760205391	606.1265353407209	640.096790864296	620.7732925015296	588.8967773909225	0.7591388532996504	0.873484333556684	1.1241169236720234	1.2279284582098977	0.7482582479966987	0.9572887773612547	1.029257687614006	1.0869422544647174	1.0541292062283554	1.0	9.201870968487848	-6.5618475811481085	5.1613996212209665	1.025802074662674	0.7829226826168627	0.35956682344161384	0.11760848921466155	0.18861458877505682	12.042661259393038	0.031966548210696825	0.09459607574238375	2.742536516467155e-07	6.5618475811481085	-0.24287939204581122	
VKVDGPRS(ph)PS(ph)YGRS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	VKVDGPRSPSYGRSR	15	3	J3KTL2;Q07955;J3KSR8	J3KTL2	SRSF1	Serine/arginine-rich splicing factor 1	3	VKVDGPRS(0.978)PS(0.958)Y(0.064)GRS(1)R	93.427	0.0059897	14002000.0	5861.3	4926.8	9673.1	6312.9	4935.2	4441.5	4028.4	6798.5	6543.9	8381.1	True	False	5603.644270122455	5740.869958718784	7642.848500732874	5759.457858409547	5584.2653038357475	5299.757015441264	4931.871245564564	6559.392901573514	6239.675517327294	6863.201575480516	0.8164767140370819	0.8364711272984644	1.1135981388099871	0.8391794696786693	0.8136531096195836	0.7721989449319373	0.7185962981451942	0.9557336804746651	0.9091493887661944	1.0	12.744666012602424														
VKVDGPRS(ph)PSY(ph)GRS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	VKVDGPRSPSYGRSR	15	3	J3KTL2;Q07955;J3KSR8	J3KTL2	SRSF1	Serine/arginine-rich splicing factor 1	3	VKVDGPRS(0.977)PS(0.203)Y(0.82)GRS(1)R	99.81299999999999	0.0014753	13534000.0	4197.9	3677.2	7201.6	4901.2	3581.3	3137.7	2943.4	4758.5	4817.9	5690.8	True	False	4013.365342423533	4284.7947982870655	5690.0825756869945	4471.519405603905	4052.3037227725245	3744.016117831828	3603.532376177824	4591.140857856527	4593.916880595849	4660.140975020527	0.8612111444559583	0.9194560467708152	1.221010824819936	0.9595244928366592	0.8695667672917717	0.8034126301973809	0.7732668164962437	0.9851935558314959	0.9857892508446301	1.0	12.186157883508738	-6.321998405294534	5.398384205069935	0.943130265944111	0.8610681065845486	0.0460140643055309	0.1176483990514143	0.696495170385916	40.662161720197986	0.03249544591084797	0.14640060474991518	4.764327362370238e-07	6.321998405294534	-0.0820621593595624	
VLAPILPDNFS(ph)TPTGSR	ddPTM_K562_Methotrexat_30min_R1	1	VLAPILPDNFSTPTGSR	17	0	Q9NQS7;Q9NQS7-2	Q9NQS7	INCENP	Inner centromere protein	1	VLAPILPDNFS(0.496)T(0.496)PT(0.008)GSR	153.41	2.5698e-11	63487000.0	4733.0	4300.6	4831.8	4309.4	3484.5	3343.2	3802.5	4547.6	4562.1	4753.1	True	False	4524.942987134181	5011.201052298858	3817.671210453847	3931.601592775131	3942.7728260689883	3989.226084436166	4655.307420131879	4387.658330395782	4350.0089667627635	3892.2675315193073	1.1625467546851578	1.2874760051097478	0.9808347395287234	1.0101056931306236	1.0129758024443831	1.024910557183363	1.1960399387846616	1.1272756291454364	1.1176027679332672	1.0	11.926395160539425	-6.75704871798048	24.99999260095485	1.0635908202320528	1.2250113921382437	0.46774961612643107	0.07080295675353182	103.2767808518373	588026.4342653395	0.019781039963396918	0.048676207223934544	1.7496504065647903e-07	6.75704871798048	0.16142057190619097	
VLAPILPDNFST(ph)PTGSR	ddPTM_K562_Methotrexat_30min_R1	1	VLAPILPDNFSTPTGSR	17	0	Q9NQS7;Q9NQS7-2	Q9NQS7	INCENP	Inner centromere protein	1	VLAPILPDNFS(0.21)T(0.707)PT(0.083)GS(0.001)R	178.47	2.9835e-07	57060000.0	2330.6	2028.5	2502.7	2521.0	2042.7	1939.4	1933.3	2047.3	2197.9	2222.0	True	False	2228.1496145816445	2363.675146395442	1977.4174714191067	2299.987844105003	2311.3508543007965	2314.161602104421	2366.8917384197125	1975.2952985793129	2095.7201087323556	1819.574268379772	1.2245444735628657	1.2990264741983635	1.0867473264391043	1.2640252635321185	1.2702701365187603	1.2718148647843053	1.3007942459679294	1.0855810245867026	1.1517639841095773	1.0	10.829385222588847	-9.771281166868901	1.3393587111422105	1.0161726001750306	1.2420683483205095	0.5387051665331057	0.06886326421711182	0.3124326354375891	1.1453815238759935	0.0647413055611713	0.020337531276775445	1.693241223132125e-10	9.771281166868901	0.22589574814547886	
VLDETARERAR	ddPTM_K562_Methotrexat_30min_R1	1	VLDETARERAR	11	2	Q03252	Q03252	LMNB2	Lamin-B2	0		68.626	0.031883	0.0	0.0	177.25	0.0	140.88	148.46	158.85	59.879	0.0	0.0	236.15	False	True	0.0	206.53754976514267	0.0	128.52926913031058	167.98509219635585	189.54551433138468	73.30839000922467	0.0	0.0	193.38094665971346	0.0	1.068034640085719	0.0	0.6646428789930355	0.8686744743883899	0.9801664414484542	0.37908796743157536	0.0	0.0	1.0	7.5953018464629585														
VLDNYLTSPLPEEVDET(ph)SAEDEGVSQR	ddPTM_K562_Methotrexat_30min_R1	1	VLDNYLTSPLPEEVDETSAEDEGVSQR	27	0	O00299	O00299	CLIC1	Chloride intracellular channel protein 1	1	VLDNYLTSPLPEEVDET(0.562)S(0.436)AEDEGVS(0.002)QR	83.36	0.0007754	7172000.0	1293.7	1320.7	1699.9	1190.5	1166.7	1330.0	1266.1	1175.0	1533.3	1432.7	True	False	1236.8304970326417	1538.9232269383572	1343.1142205079877	1086.1307133704906	1320.1414998348944	1587.0036768066839	1550.0551544060404	1133.6745840036606	1462.0172176711035	1173.2241468531504	1.0542150026063628	1.3117043585116224	1.1448061515870778	0.9257657339253852	1.125225306158085	1.3526858282480656	1.3211926796457736	0.96628984925381	1.2461533642932263	1.0	10.19626295417576	-12.243056503015662	4.096545206563833	0.9998781624612004	1.1615230802657355	0.1049966664139157	0.14091267758212914	12017223.064238992	35915054.153310426	6499.239418062736	0.035232450403942975	5.714042904223412e-13	12.243056503015662	0.16164491780453505	
VLDSVEAGDT(ph)TPPTK	ddPTM_K562_Methotrexat_30min_R1	1	VLDSVEAGDTTPPTK	15	0	Q8IZ21-3	Q8IZ21-3	PHACTR4	Phosphatase and actin regulator 4	1	VLDSVEAGDT(0.581)T(0.416)PPT(0.003)K	90.229	0.029464999999999998	11362000.0	2475.0	1755.5	3154.9	3018.6	1763.9	1960.6	1935.3	2464.0	2407.6	2945.3	True	False	2366.201963481322	2045.5665366020194	2492.729604259455	2753.964024678845	1995.8837675141594	2339.458202065552	2369.340289331024	2377.3397233915057	2295.6712015032617	2411.877629459472	0.9810621959338848	0.8481220239438322	1.033522419965437	1.1418340595065921	0.8275228158907294	0.9699738384280508	0.9823633920689496	0.9856800752881868	0.9518191028695543	1.0	11.23594099627384	-8.1456166354874	0.003684203542819687	1.9366052526761814	0.0041572141823470795	0.008650976764549845	0.08355268223198345	178779.2961575978	239.73802867910166	62186.48114779408	63555.28324531065	7.151273114509337e-09	8.1456166354874	-1.9324480384938343	
VLDTSSLTQSAPAS(ph)PTNK	ddPTM_K562_Methotrexat_30min_R1	2	VLDTSSLTQSAPASPTNK	18	0	Q8N122;Q8N122-3;I3L436	Q8N122	RPTOR	Regulatory-associated protein of mTOR	1	VLDTSSLTQSAPAS(1)PTNK;VLDTSSLT(0.005)QS(0.299)APAS(0.695)PT(0.001)NK	164.5	3.3251e-12	39733000.0	4258.6	3219.1000000000004	6187.6	3728.8	3004.2	3057.2	2420.2	3760.5	3867.1	4482.3	True	False	4071.3970431036637	3751.00155965569	4888.907318557104	3401.9018933354755	3399.3049574046368	3647.960632130368	2962.991457778612	3628.2410835283085	3687.319365066149	3670.5120356249568	1.1092177340893667	1.0219286909427143	1.3319415032853035	0.9268194356312071	0.9261119223726662	0.9938560606052477	0.807241994855391	0.9884836361558338	1.0045790149379883	1.0	11.841765617411626	-7.309373441947658	24.998559595634124	0.9440403470939056	1.141119489319298	0.5150343662883518	0.09067648191107607	304.8330891704845	158975.73544495134	0.02503949863576672	0.03713965408204209	4.9048593480994876e-08	7.309373441947658	0.19707914222539236	
VLDTSSLTQSAPASPT(ph)NK	ddPTM_K562_Methotrexat_30min_R1	2	VLDTSSLTQSAPASPTNK	18	0	Q8N122;Q8N122-3;I3L436	Q8N122	RPTOR	Regulatory-associated protein of mTOR	1	VLDTSSLTQSAPAS(0.093)PT(0.907)NK;VLDTSSLTQSAPAS(0.235)PT(0.765)NK	226.23	2.3764999999999995e-44	26577000.0	3899.7	2628.9	5609.8	3744.0	3046.9	2540.8	2063.74	3186.2	3462.1	4330.3	True	False	3728.2738573689326	3063.281041340385	4432.3796424529155	3415.769332935	3447.6207558472083	3031.7736406243766	2526.5862288554786	3074.139540044647	3301.147726667404	3546.040708535072	1.0513905969537343	0.8638595247841576	1.2499517086153262	0.9632628651762181	0.9722451148259597	0.8549742909964653	0.71250908732496	0.866921672006023	0.9309390382128926	1.0	11.791993383127837	-8.005098894764958	2.3143622112120528	0.8557183521275227	1.0370237679586023	0.30389500516649404	0.11299659740844724	0.353437068220938	3.801465912919162	0.04027430283380759	0.043846380767129135	9.883280132895476e-09	8.005098894764958	0.18130541583107962	
VLGAGGAGPAPAT(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	1	VLGAGGAGPAPATPSR	16	0	H7C355;G3V195;B7WPE2;Q32P44	H7C355	EML3	Echinoderm microtubule-associated protein-like 3	1	VLGAGGAGPAPAT(0.778)PS(0.222)R	132.51	2.1504e-09	0.0	473.49	441.49	421.54	359.75	405.12	602.73	346.14	402.94	360.54	568.18	True	False	452.67594654091766	514.4387184531047	333.0645146849444	328.2112760479077	458.4003809146415	719.1990421967614	423.77070622076207	388.7683718114337	343.7785740945282	465.27709622323056	0.9729168923538263	1.1056609547921683	0.7158411995529365	0.7054103430237162	0.9852201723136406	1.5457434892769883	0.9107921057378794	0.8355630977049223	0.738868465447932	1.0	8.861946360367751	-8.993696057376098	24.998551261542442	0.8469648761025524	1.002543581708359	0.08012007989456504	0.22640631055918692	454.6604273480422	1802968.6044628518	0.10419873721965478	0.07004340746470168	1.014621223789585e-09	8.993696057376098	0.15557870560580656	
VLGS(ph)EGEEEDEALS(ph)PAK	ddPTM_K562_Methotrexat_30min_R1	1	VLGSEGEEEDEALSPAK	17	0	P18858-3;P18858;M0R0Q7;P18858-2;B4E135;F5GZ28;M0QY71;M0R1G7	P18858-3	LIG1	DNA ligase 1;DNA ligase	2	VLGS(1)EGEEEDEALS(1)PAK	135.95	4.4412e-06	15383000.0	4017.3	2590.6	5941.1	3684.1	2934.3	3027.2	2308.4	3158.0	3334.2	5032.8	True	False	3840.704302179198	3018.6526173290745	4694.144299935292	3361.120672934251	3320.2118822023913	3612.1635567136773	2826.1174618362734	3046.931350028561	3179.1937697508606	4121.311151170889	0.9319132094862652	0.7324495789335045	1.1389929388373545	0.8155464486051572	0.8056202893729825	0.8764598022858429	0.6857326123103703	0.739311165370979	0.7714034813526837	1.0	12.008887673130141	-7.4910076936708325	24.993898040943726	0.7981023216798245	0.9247546826474312	0.16567656902229522	0.12111391112168755	1097.4144172896144	860613.8568060177	0.033196723358945864	0.04918532084262431	3.228436928374755e-08	7.4910076936708325	0.12665236096760668	
VLGS(ph)PTPLVLRS(ph)DGVMGEY(ph)EPK	ddPTM_K562_Methotrexat_30min_R1	1	VLGSPTPLVLRSDGVMGEYEPK	22	1	Q9P232	Q9P232	CNTN3	Contactin-3	3	VLGS(0.739)PT(0.289)PLVLRS(0.973)DGVMGEY(0.999)EPK	41.68899999999999	0.031214999999999996	66095000.0	3129.4	2566.6	3328.0	3222.0	2816.0	2647.1	2785.4	3068.3	3104.1	3630.3	True	False	2991.835323037757	2990.687025259325	2629.49827981092	2939.5322624777154	3186.3533586483754	3158.614611184188	3410.0968541841758	2960.3861498710053	2959.791068527278	2972.8174916737566	1.006397241477913	1.006010975660503	0.8845138617407888	0.9888034737116335	1.0718294572649307	1.062498663315461	1.1470925691654963	0.995818329972301	0.9956181557788317	1.0	11.537615180151354	-7.629586063277291	5.356473581382283	1.0508270788512937	0.9647107906639436	0.3186527835894305	0.053343378754027206	0.2442306569762925	10.629178333702583	0.01671187013626392	0.021698690813300895	2.3464642224425122e-08	7.629586063277291	-0.08611628818735007	
VLGSEGEEEDEALS(ph)PAK	ddPTM_K562_Methotrexat_30min_R1	2	VLGSEGEEEDEALSPAK	17	0	P18858-3;P18858;M0R0Q7;P18858-2;B4E135;F5GZ28;M0QY71;M0R1G7	P18858-3	LIG1	DNA ligase 1;DNA ligase	1	VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK	268.12	9.462499999999997e-111	51374000.0	5675.200000000001	3803.38	8519.7	5256.2	4471.200000000001	3702.1000000000004	3434.2200000000003	5569.9	5000.2	6562.0	True	False	5425.725003292607	4431.823898593782	6731.5313985892735	4795.39710677696	5059.24117087664	4417.47843000453	4204.43125532289	5374.003459950624	4767.741793386193	5373.558212919924	1.0097080534546468	0.8247466060641381	1.252713961933883	0.8924062821627462	0.9415067205771486	0.8220769655725249	0.7824296469356112	1.0000828588828963	0.8872597270692751	1.0	12.391661999718176	-7.416060079591028	21.610238742253223	0.8967617214413987	1.019282270393508	0.19401527172677546	0.11598540153855755	17.382321478946114	3500.839733906945	0.032228788879711874	0.04780297205192752	3.836541677285442e-08	7.416060079591028	0.1225205489521094	
VLGT(ph)SPEAIDSAENR	ddPTM_K562_Methotrexat_30min_R1	1	VLGTSPEAIDSAENR	15	0	P27708;F8VPD4	P27708	CAD	CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase	1	VLGT(0.605)S(0.395)PEAIDSAENR	145.49	2.3096e-08	8890300.0	1577.2	1196.3	1639.9	1069.7	1432.9	1184.0	1014.0	1322.8	1428.2	1303.6	True	False	1507.8681764859566	1393.9682413768126	1295.7074005594736	975.9210618163916	1621.351465769624	1412.7912431121144	1241.4153120351682	1276.276374229822	1361.8032937310832	1067.505407857727	1.4125157262780998	1.3058184353128777	1.2137712755570045	0.9142071362194528	1.5188227186814507	1.323451134498052	1.1629124338830696	1.195569001182914	1.2756874894563335	1.0	10.060027663050956	-15.369267843292047	0.23622306998325923	1.895367739737888e-08	1.2808488389755073	0.21271878297063462	0.15157384367328017	209.13046913824303	2.7484849094250086	100.16447659352693	0.26034068581005626	4.2729927574669688e-16	15.369267843292047	1.28084882002183	
VLGTS(ph)PEAIDSAENR	ddPTM_K562_Methotrexat_30min_R1	1	VLGTSPEAIDSAENR	15	0	P27708;F8VPD4	P27708	CAD	CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase	1	VLGT(0.287)S(0.701)PEAIDS(0.012)AENR	137.93	1.1082e-05	8116600.0	3702.0	3052.8	4237.2	3460.7	3418.5	3390.7	2739.9	3813.0	4008.3	4235.8	True	False	3539.2645126496377	3557.2233112723693	3347.8696247640687	3157.305804083374	3868.0926692256653	4045.904787179263	3354.3923209518284	3678.8946287710255	3821.9550078856605	3468.6555742587925	1.0203562841219638	1.0255337363763777	0.9651778774488055	0.9102390642397667	1.1151561711491713	1.1664187177315295	0.9670583455575924	1.0606111071022548	1.10185486164978	1.0	11.760160877670849	-7.772963540346808	24.99730129867643	1.0713692864429896	0.9824737400589291	0.33585979936002797	0.06064438237497385	270.2152796125975	586128.0500091224	0.019623290285959404	0.022441781516275003	1.6866946199108118e-08	7.772963540346808	-0.0888955463840605	
VLHVS(ph)ENPVPLTVR	ddPTM_K562_Methotrexat_30min_R1	2	VLHVSENPVPLTVR	14	0	Q8N1G4	Q8N1G4	LRRC47	Leucine-rich repeat-containing protein 47	1	VLHVS(1)ENPVPLTVR;VLHVS(1)ENPVPLTVR	99.81299999999999	0.0062756	6347300.0	4589.9	4053.4	4583.0	4899.0	4118.0	3873.3	4372.8	4535.6	4986.200000000001	6043.8	True	False	4388.13349179108	4723.155453980418	3621.0909304006727	4469.512276188185	4659.58918001208	4621.76040704912	5353.511712492483	4376.080377197448	4754.392650330436	4949.209254380589	0.8866332511415038	0.9543252691932376	0.7316503999493682	0.9030760362844185	0.9414815459434931	0.9338381485806765	1.0816903140141108	0.8841978894556014	0.9606368221594753	1.0	12.272982325831451	-7.762140423440895	2.782259297027681	0.9684277227538481	0.8617651738091103	0.33393893802679975	0.07000737096778699	0.32838406709184476	5.214680749496229	0.022845644853639855	0.028654060840244015	1.7292571361319923e-08	7.762140423440895	-0.10666254894473781	
VLIEDT(ph)DDEANT	ddPTM_K562_Methotrexat_30min_R1	3	VLIEDTDDEANT	12	0	Q9UBH6-2;Q9UBH6	Q9UBH6-2	XPR1	Xenotropic and polytropic retrovirus receptor 1	1	VLIEDT(1)DDEANT;VLIEDT(0.999)DDEANT(0.001);VLIEDT(1)DDEANT	163.34	0.00025628	33902700.0	6779.799999999999	5743.200000000001	6787.6	7605.799999999999	4809.2	5704.0	5686.0	5995.3	6898.6	6490.9	True	False	6481.768109903302	6692.166182291491	5362.97551804225	6939.011322766296	5441.694095316684	6806.217272560395	6961.230240859922	5784.441900831612	6577.885591747136	5315.335111893007	1.219446746716009	1.2590299654518187	1.0089628226906424	1.305470149424884	1.0237725337657357	1.280486955061696	1.3096503031924067	1.0882553553187988	1.2375297988322853	1.0	12.375944935783577	-12.160776920907301	4.14216306570688	0.9999413061746658	1.1903953522548958	0.22542493946029263	0.10699079601035492	82621422.2271389	6.407740037498521	50116.68774765211	0.02455426818555947	6.90594442520802e-13	12.160776920907301	0.19045404608022998	
VLLGFS(ph)SDESDVEASPR	ddPTM_K562_Methotrexat_30min_R1	1	VLLGFSSDESDVEASPR	17	0	Q9Y2U8	Q9Y2U8	LEMD3	Inner nuclear membrane protein Man1	1	VLLGFS(0.449)S(0.449)DES(0.102)DVEASPR	220.25	1.2716999999999999e-30	11806000.0	2604.7	2412.2	2609.5	2907.8	2096.5	1883.4	2262.7	2389.3	3203.4	2771.3	True	False	2490.2005067797163	2810.77504961059	2061.801610927463	2652.877688650745	2372.226497303381	2247.3403946599315	2770.1680735127934	2305.2669647318694	3054.4746332013415	2269.390715553945	1.0972991515794903	1.2385593323997082	0.9085265030813301	1.1689823486403015	1.0453142691756958	0.9902835942956473	1.220665993972136	1.0158087582416002	1.3459448001909016	1.0	11.148089300400095	-8.768361149373387	24.9999934950769	1.1469222572470426	1.077649001787735	0.07136769704966384	0.12479012301585203	490.8756522448926	1772917.8951845972	0.04879685313484721	0.0337029386453663	1.7046642395814301e-09	8.768361149373387	-0.06927325545930763	
VLLGFSSDES(ph)DVEASPR	ddPTM_K562_Methotrexat_30min_R1	2	VLLGFSSDESDVEASPR	17	0	Q9Y2U8	Q9Y2U8	LEMD3	Inner nuclear membrane protein Man1	1	VLLGFS(0.059)S(0.244)DES(0.697)DVEASPR;VLLGFS(0.017)S(0.321)DES(0.662)DVEASPR	196.45	1.1124000000000001e-11	38550000.0	2099.56	1693.23	2203.95	2392.2200000000003	1717.18	1393.64	1914.07	1827.6100000000001	2190.74	2492.74	True	False	2007.2658563421592	1973.0074775110447	1741.371013758797	2182.497786761154	1943.0192686093108	1662.9412061239602	2343.348921407449	1763.3319204007912	2088.892975569551	2041.2806308555314	0.9833365515749218	0.9665537641848527	0.8530777137825298	1.069180667161103	0.9518628841321843	0.8146558493659917	1.1479797956174778	0.8638361104037676	1.023324742318289	1.0	10.995258819268072	-9.748238060962658	0.5981908208186879	1.0002692237998683	0.9535486415715483	0.023164890285402917	0.09622112483585055	4.266928673926984	3.6387564773496544	0.09416871198791511	0.044695858282344035	1.7855085699890005e-10	9.748238060962658	-0.046720582228319985	
VLLS(ph)DSNLHDA	ddPTM_K562_Methotrexat_30min_R1	5	VLLSDSNLHDA	11	0	H3BV90;Q6FI81-2;Q6FI81-3;Q6FI81	H3BV90	CIAPIN1	Anamorsin	1	VLLS(0.591)DS(0.409)NLHDA;VLLS(0.976)DS(0.024)NLHDA;VLLS(0.934)DS(0.066)NLHDA;VLLS(0.976)DS(0.024)NLHDA;VLLS(0.892)DS(0.108)NLHDA	137.4	8.1659e-05	62756700.0	15215.0	13010.8	18468.5	17651.800000000003	13807.9	13176.600000000002	12794.9	14498.099999999999	14270.8	14973.2	True	False	14546.166817926603	15160.613554213362	14592.214236985557	16104.294100187513	15623.880873892373	15722.791464519507	15664.48202757274	13988.19360539869	13607.353622866221	12261.40838672548	1.1863373569446283	1.2364496048126605	1.190092832466413	1.3134130755829356	1.2742321584204954	1.2822989797437472	1.2775434545130653	1.140830903286989	1.1097708512504891	1.0	13.581837080914699	-9.754970086210365	1.5308149624922749	1.0093627227617983	1.252828151421731	0.7893113704953953	0.042169523572863236	0.16758630343699454	0.7801776344272406	0.0416304088877924	0.012705200796113923	1.758044702230492e-10	9.754970086210365	0.2434654286599327	
VLMASTSYLPS(ph)QVTEMFNQGR	ddPTM_K562_Methotrexat_30min_R1	1	VLMASTSYLPSQVTEMFNQGR	21	0	Q9Y4P8-4;Q9Y4P8;Q9Y4P8-3;Q9Y4P8-2;Q9Y4P8-5;Q9Y4P8-6	Q9Y4P8-4	WIPI2	WD repeat domain phosphoinositide-interacting protein 2	1	VLMAS(0.037)T(0.037)S(0.037)Y(0.079)LPS(0.81)QVTEMFNQGR	55.733999999999995	0.018755	0.0	386.2	536.27	598.4	433.52	490.51	573.97	516.89	520.63	459.88	555.04	True	False	369.22311042282274	624.8795024685647	472.8040176198478	395.5139746832214	555.0206626245086	684.8815792306256	632.8157402740212	502.3191478041069	438.50027917732166	454.51687755243444	0.812341914366487	1.374821339602459	1.0402342376500722	0.8701854523270013	1.2211222289770303	1.5068342080467971	1.39228216052553	1.10517160662787	0.9647612681373641	1.0	8.828190056711414	-6.23796805026144	23.20754988843982	1.1738145933493944	0.8123408180150217	0.2206175741266705	0.19746719565184062	4004.408442245518	3959245.0876446944	0.05311129913956143	2.5943856237059797	5.781385777572546e-07	6.23796805026144	-0.36147377533437275	
VLNT(ph)GSDVEEAVADALKKPAR	ddPTM_K562_Methotrexat_30min_R1	2	VLNTGSDVEEAVADALKKPAR	21	2	E3W994;J3KR49;O75122	E3W994	CLASP2	CLIP-associating protein 2	1	VLNT(0.605)GS(0.395)DVEEAVADALKKPAR;VLNT(0.614)GS(0.386)DVEEAVADALKKPAR	109.5	5.6406e-05	26783000.0	10988.6	6294.7	14587.1	10999.900000000001	6319.4	4608.9	4974.2	7066.200000000001	8350.8	12166.099999999999	True	False	10505.554301378126	7334.792183394322	11525.467054516179	10035.555845446506	7150.511865995227	5499.504696266407	6089.790971523997	6817.6777408397165	7962.573130716656	9962.701398080626	1.0544885249097282	0.7362252355377642	1.1568616376213614	1.007312720160409	0.7177282124879117	0.5520093874665278	0.6112590077925282	0.6843201927293718	0.7992383604160508	1.0	13.28232126844026	-7.781133753240323	7.819039707014423	0.696415205732213	0.982900877672089	0.4091324734435179	0.1510663801304408	0.15638995768939748	44.5471804943937	0.04584317234568144	0.053493093562277744	1.6552601009052193e-08	7.781133753240323	0.28648567193987595	
VLPPPAGYVPIRT(ph)PAR	ddPTM_K562_Methotrexat_30min_R1	2	VLPPPAGYVPIRTPAR	16	1	O75533	O75533	SF3B1	Splicing factor 3B subunit 1	1	VLPPPAGYVPIRT(1)PAR;VLPPPAGYVPIRT(1)PAR	131.48	0.00037103	135219000.0	6275.299999999999	5173.9	4478.6	6151.9	4937.0	4966.4	4953.5	5050.200000000001	6272.2	6230.8	True	False	5999.445325832057	6028.799033736935	3538.60306369026	5612.572478440922	5586.302035386021	5926.086511648655	6064.4484695919145	4872.58160351939	5980.606791023735	5102.341742313537	1.1758219321294912	1.1815749195590568	0.6935252953256251	1.0999993261713656	1.0948506230108068	1.1614444525547616	1.1885617968901732	0.9549696687525349	1.1721297970746996	1.0	12.316943815007738														
VLPQGPPT(ph)PAK	ddPTM_K562_Methotrexat_30min_R1	1	VLPQGPPTPAK	11	0	H3BPZ6;Q8IWY9-1;Q8IWY9	H3BPZ6	CDAN1	Codanin-1	1	VLPQGPPT(1)PAK	101.45	0.015040000000000001	16235000.0	4373.0	3823.7	5999.2	4564.9	3998.8	3136.6	2930.6	4133.7	4323.3	5190.0	True	False	4180.768156082352	4455.50143321284	4740.0499039187725	4164.702304464473	4524.712290682929	3742.70355839988	3587.8616503454236	3988.3154279965374	4122.310726640242	4250.040707871745	0.9837007321692026	1.0483432370331298	1.1152951770884107	0.9799205679961577	1.0646279886925432	0.8806276964518959	0.8441946552888631	0.9384181710564674	0.9699461746342977	1.0	12.053260944444999	-8.257922995807686	24.997830066699947	0.9176358059860801	1.0399567856663536	0.5078975266124601	0.054625373181606866	244.20819417987812	1736069.3123759765	0.01870877492373225	0.018022739004338505	5.521753360954752e-09	8.257922995807686	0.12232097968027356	
VLS(ph)GHLLGR	ddPTM_K562_Methotrexat_30min_R1	1	VLSGHLLGR	9	0	B8ZZ81;O00116	B8ZZ81	AGPS	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	VLS(1)GHLLGR	85.963	0.014316999999999998	4069900.0	3648.7	3120.5	3938.0	3637.3	2933.2	3006.0	2599.0	3808.0	3722.5	3987.1	True	False	3488.307516830023	3636.109585569127	3111.467615954145	3318.4235562725626	3318.9672129216706	3586.8669567525476	3181.8919092499004	3674.0704816050516	3549.4417875045224	3264.9975542110647	1.0683951393258908	1.1136638007215094	0.9529770127824743	1.016363259443362	1.0165297700272387	1.09858182041403	0.974546490898905	1.125290423837035	1.0871192791328719	1.0	11.672866195720504	-9.27397286798263	24.921661265736066	1.0796536271205721	1.0354341340040594	0.07581756287959229	0.05559195166477919	1730.5395685158867	3440989.4713049293	0.029889537043691117	0.01451349088352663	5.321415031188722e-10	9.27397286798263	-0.04421949311651274	
VLS(ph)GHLLGRPR	ddPTM_K562_Methotrexat_30min_R1	1	VLSGHLLGRPR	11	1	B8ZZ81;O00116	B8ZZ81	AGPS	Alkyldihydroxyacetonephosphate synthase, peroxisomal	1	VLS(1)GHLLGRPR	98.368	0.006208	385250000.0	3255.3	2539.6	3070.7	3695.0	2571.2	2473.1	2655.5	3184.2	3537.7	3618.5	True	False	3112.2009097861624	2959.225734180854	2426.2020335983743	3371.06508685759	2909.3578678113295	2950.991573767375	3251.0634724944653	3072.2098811782585	3373.2330991685035	2963.1545860180954	1.0502998812385136	0.9986740982546843	0.8187902328979464	1.137660891120651	0.9818447817536721	0.9958952488310557	1.0971629653865826	1.0368037819136233	1.1383925479573018	1.0	11.53291817746961	-8.325459294795126	0.9722778867989083	1.071203411950839	0.9823382011301621	0.1255396284202357	0.08263263434957731	1.079241049023248	2.152544415409445	0.04961866423562551	0.04251132492132792	4.726511350888342e-09	8.325459294795126	-0.08886521082067678	
VLS(ph)PEELEDR	ddPTM_K562_Methotrexat_30min_R1	1	VLSPEELEDR	10	0	A0A494C179;A0A0A0MRH8;A0A494C1P7;A0A0A0MSH9;A0A494C1F7;Q86WJ1-5;Q86WJ1-3;Q86WJ1-4;Q86WJ1-2;Q86WJ1	A0A494C179	CHD1L	Chromodomain-helicase-DNA-binding protein 1-like	1	VLS(1)PEELEDR	110.86	0.0028082	3742500.0	932.06	929.93	1371.2	1072.8	659.02	796.75	886.02	978.43	776.06	1197.8	True	False	891.0877584171322	1083.585126392661	1083.4038585567112	978.7492896294511	745.6926812558427	950.7106612749809	1084.7325392203152	944.0180623205961	739.9811399894581	980.8668130806893	0.9084696785880841	1.1047219785011952	1.1045371747811257	0.9978411712752443	0.7602384659276871	0.9692556100343588	1.1058917732300537	0.9624324625232662	0.7544155130147979	1.0	9.93791344329078	-7.528680841397574	24.964297205710892	0.9296527743511434	1.046690590859497	0.17747102869398435	0.11130139482719192	262.01475250739054	1127346.0167524314	0.03411859633472907	0.044181152043228575	2.960187078812896e-08	7.528680841397574	0.11703781650835365	
VLS(ph)PLIIK	ddPTM_K562_Methotrexat_30min_R1	2	VLSPLIIK	8	0	Q8NCN4	Q8NCN4	RNF169	E3 ubiquitin-protein ligase RNF169	1	VLS(1)PLIIK;VLS(1)PLIIK	94.40899999999999	0.017907	93621000.0	15668.8	10559.599999999999	20960.6	17568.7	11231.5	10042.7	9862.0	11862.400000000001	12210.5	16608.4	True	False	14980.018313291364	12304.394417489415	16561.256503547094	16028.479348166435	12708.639114935819	11983.309642907134	12073.80454367931	11445.192668327674	11642.836520167619	13600.457821313512	1.1014348568337105	0.904704428273509	1.2176984570029448	1.1785249848757244	0.9344273025147647	0.8810960484085971	0.8877498612405712	0.8415299557336751	0.8560621026978907	1.0	13.731367596129594	-7.905194861314515	5.604891720003084	0.885579546903698	1.0940139340386745	0.5658195912169147	0.08632429209324051	0.15985544014672956	7.693629264441038	0.0280579385540139	0.03195705829490271	1.2439563422868418e-08	7.905194861314515	0.20843438713497653	
VLS(ph)PLRS(ph)PPLIGSESAYESFLSADDKASGR	ddPTM_K562_Methotrexat_30min_R1	1	VLSPLRSPPLIGSESAYESFLSADDKASGR	30	2	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	2	VLS(0.995)PLRS(0.983)PPLIGS(0.014)ES(0.001)AY(0.001)ES(0.007)FLSADDKASGR	67.49600000000001	0.00015216	58902000.0	550.36	351.75	870.45	463.67	485.8	273.37	254.72	416.44	493.18	787.26	True	False	526.1668333824566	409.8707087722932	687.7544404030693	423.0207709941162	549.6912150679623	326.1948835553708	311.84744406469224	401.793569159561	470.2521694456628	644.6795852946259	0.8161679776814903	0.6357742948925204	1.066815913038037	0.6561721212263778	0.8526580143169062	0.5059798557236709	0.4837247078673577	0.6232453738641914	0.7294354903928782	1.0	9.332438488973501														
VLS(ph)PLRSPPLIGSESAYESFLSADDKASGR	ddPTM_K562_Methotrexat_30min_R1	1	VLSPLRSPPLIGSESAYESFLSADDKASGR	30	2	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	VLS(0.865)PLRS(0.13)PPLIGS(0.003)ES(0.001)AY(0.001)ESFLSADDKASGR	55.158	0.0019621	8352600.0	1137.5	824.91	1289.5	1225.9	737.71	777.25	698.39	1006.9	994.91	1978.3	True	False	1087.4968620040427	961.2123564274408	1018.8515720601503	1118.4272503325367	834.731795528585	927.4425622541307	855.0217354755825	971.4867562836473	948.6568512575222	1620.0106998810547	0.6712899254825226	0.5933370418467084	0.6289165695849768	0.6903826316793182	0.5152631372063612	0.5724916275690191	0.5277877087715287	0.599679222090926	0.5855867812028495	1.0	10.661787626546282	-11.655157410865623	6.703130072996649	1.0000000003900873	0.5965312316203748	0.8407907473624626	0.052434462970174525	3.375092964121992e-10	1.173697621074843e-10	0.05279754964448937	0.01280528670341305	2.2122927145463463e-12	11.655157410865623	-0.4034687687697125	
VLSNRGDS(ph)LSR	ddPTM_K562_Methotrexat_30min_R1	6	VLSNRGDSLSR	11	1	M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;Q15642	M0R0F9	TRIP10	Cdc42-interacting protein 4	1	VLSNRGDS(0.647)LS(0.353)R;VLSNRGDS(0.918)LS(0.082)R;VLS(0.032)NRGDS(0.836)LS(0.131)R;VLSNRGDS(0.92)LS(0.08)R;VLS(0.015)NRGDS(0.813)LS(0.172)R;VLS(0.002)NRGDS(0.669)LS(0.33)R	128.57	0.0026974	327191000.0	16095.100000000002	13210.0	16103.2	16933.4	13817.699999999999	14998.0	14812.1	18886.7	18709.1	23396.199999999997	True	False	15387.578675728586	15392.727968392297	12723.358383248555	15448.87511279955	15634.969745666089	17896.151236651604	18134.090476722005	18222.444055916527	17839.31802460736	19158.92146618669	0.8031547445343364	0.8034235118902024	0.6640957532867302	0.8063541123682275	0.8160673226444415	0.9340897016690771	0.9465089414728594	0.951120556972743	0.9311232918873706	1.0	14.225728727722721	-8.150085857069348	1.845127774824633	0.9550607392232354	0.7622438835824995	0.8195620535522126	0.041454766875058745	0.1463222360473608	0.9859760781630249	0.016731732901705983	0.01655848379713569	7.07805842144198e-09	8.150085857069348	-0.19281685564073592	
VLSPLRS(ph)PPLIGSESAYESFLSADDKASGR	ddPTM_K562_Methotrexat_30min_R1	2	VLSPLRSPPLIGSESAYESFLSADDKASGR	30	2	P46821	P46821	MAP1B	Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1	1	VLS(0.019)PLRS(0.979)PPLIGS(0.002)ESAYESFLSADDKASGR;VLS(0.075)PLRS(0.912)PPLIGS(0.009)ES(0.003)AY(0.001)ESFLSADDKASGR	103.57	9.5396e-10	138392000.0	1990.3899999999999	1477.24	2618.2	2278.8	1790.63	1400.8899999999999	1653.62	2487.1	2307.8	3453.3	True	False	1902.8948388256917	1721.328801213311	2068.6755998199974	2079.021142065246	2026.1292310357042	1671.5921660163262	2024.4863789818485	2399.6272832983013	2200.510881720064	2827.873906838825	0.6729065373897336	0.608700691021093	0.731530353887841	0.7351887709835359	0.7164849981945053	0.5911126949379921	0.7159040486514996	0.8485623342310745	0.7781502832917798	1.0	11.465502077357499	-10.008948495581752	0.7636954679665414	0.9968055942332916	0.6756688674743982	0.7445009367691118	0.056733803348082	0.3700605481592433	0.4937538793724887	0.05810739129825013	0.022064283758929406	9.796061532521786e-11	10.008948495581752	-0.3211367267588934	
VLSTS(ph)TDLEAAVADALKKPVR	ddPTM_K562_Methotrexat_30min_R1	1	VLSTSTDLEAAVADALKKPVR	21	2	Q7Z460	Q7Z460	CLASP1	CLIP-associating protein 1	1	VLS(0.028)T(0.155)S(0.662)T(0.155)DLEAAVADALKKPVR	132.86	1.7441999999999998e-08	45427000.0	1512.3	1059.8	2187.5	1769.4	838.94	920.55	867.63	713.92	1249.7	1526.9	True	False	1445.8211027768914	1234.913936480102	1728.3736439562467	1614.2794491707239	949.2753148808492	1098.433259161197	1062.2181135908015	688.8110289462918	1191.6017197701558	1250.3636140364877	1.1563205187244836	0.9876438522498985	1.3822968171447525	1.2910480047955206	0.7591994074558441	0.8784910619841044	0.8495273708115152	0.5508885745024497	0.953004155265976	1.0	10.288131985856301	-7.764671210516077	24.998247535284616	0.8126118981415049	1.2015620426314666	0.6001305280620348	0.1484452075010309	56.563227203068244	437517.1935680234	0.045957937008610915	0.05429725549498812	1.7192094492165334e-08	7.764671210516077	0.3889501444899617	
VLSTS(ph)TDLEAAVADALLLGDSR	ddPTM_K562_Methotrexat_30min_R1	2	VLSTSTDLEAAVADALLLGDSR	22	0	H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-4;Q7Z460-5;Q7Z460-3	H0Y5T1	CLASP1	CLIP-associating protein 1	1	VLS(0.154)T(0.114)S(0.707)T(0.026)DLEAAVADALLLGDSR;VLS(0.237)T(0.237)S(0.525)T(0.001)DLEAAVADALLLGDSR	141.74	3.2043000000000003e-13	59442000.0	1463.02	1072.3400000000001	1580.32	2072.04	1301.1	1363.57	1105.1399999999999	1598.69	1776.6	1608.56	True	False	1398.707392570684	1249.525958336548	1248.632428350598	1890.3874702496366	1472.217455588567	1627.0606041979609	1352.995777063653	1542.4631665538814	1694.0062537758322	1317.234196734908	1.0618517162989904	0.9485981774796072	0.9479198394982787	1.4351187320640713	1.1176580893798715	1.2352098117639478	1.0271489917414753	1.1709862759236431	1.2860327024418643	1.0	10.363296156019754														
VLSTST(ph)DLEAAVADALKKPVRR	ddPTM_K562_Methotrexat_30min_R1	1	VLSTSTDLEAAVADALKKPVRR	22	3	Q7Z460	Q7Z460	CLASP1	CLIP-associating protein 1	1	VLS(0.089)T(0.285)S(0.285)T(0.342)DLEAAVADALKKPVRR	65.111	0.0059339	2824900.0	950.49	825.78	1502.1	1321.3	812.93	797.42	948.61	861.24	1042.2	1519.1	True	False	908.7075976845911	962.2261091399693	1186.8297374110525	1205.4636804505913	919.8445439794119	951.5101292926204	1161.3599399898228	830.949701044521	993.7483494794392	1243.976269620033	0.7304862800655769	0.773508412209404	0.9540613968251697	0.9690407364593818	0.7394389800220018	0.7648941161741413	0.9335868925735658	0.6679787398985761	0.7988483170848389	1.0	10.280743249207742	-7.807435847398674	24.999827945742307	0.8040351683345008	0.8577777265237614	0.02066576831575928	0.11152728313360522	452.07243819109374	245706.10685342515	0.035198905909543526	0.03991194544907463	1.557988158896454e-08	7.807435847398674	0.05374255818926055	
VLT(ph)PELYAELR	ddPTM_K562_Methotrexat_30min_R1	4	VLTPELYAELR	11	0	P12277;G3V461;G3V4N7	P12277	CKB	Creatine kinase B-type	1	VLT(1)PELYAELR;VLT(1)PELYAELR;VLT(0.99)PELY(0.01)AELR;VLT(1)PELYAELR	145.81	4.0384e-07	35330300.0	5056.54	4690.59	6479.799999999999	5479.0	4244.05	4318.97	4549.76	5299.7	4459.0	5514.33	True	False	4834.260556130038	5465.6302711022845	5119.778531706365	4998.664576696278	4802.2169644075475	5153.549827081024	5570.159497125367	5113.306547101444	4251.702063259278	4515.6314020497875	1.0705613735292068	1.2103800741179322	1.1337901781315314	1.1069691326947604	1.0634652248692553	1.1412689319021179	1.2335283820102978	1.1323569378980651	0.9415520632019025	1.0	12.14071201254938	-9.753912000587324	24.91671983381913	0.9707760201882791	1.1388787770608593	0.6173259782541902	0.05217844882600646	95.50886328818228	316156.2155431379	0.037998363664826576	0.013733126383145082	1.7623331049827998e-10	9.753912000587324	0.16810275687258014	
VLTANSNPS(ph)SPSAAKR	ddPTM_K562_Methotrexat_30min_R1	3	VLTANSNPSSPSAAKR	16	1	Q9NV56	Q9NV56	MRGBP	MRG/MORF4L-binding protein	1	VLTANSNPS(0.5)S(0.5)PSAAKR;VLTANSNPS(0.61)S(0.38)PS(0.01)AAKR;VLTANSNPS(0.758)S(0.242)PSAAKR	236.12	2.1609000000000002e-51	84282000.0	10329.3	8270.8	14395.7	11013.4	9076.8	8331.0	7587.900000000001	10742.3	11664.9	14028.7	True	False	9875.236339954592	9637.409120437473	11374.23929888043	10047.872321406605	10270.558297506961	9940.847843215399	9289.679729972035	10364.4872202064	11122.60134508033	11487.9664891176	0.8596156986799426	0.838913408179495	0.9901003201615445	0.8746432478650441	0.894027529348743	0.865327023075166	0.808644396619021	0.9022038173618058	0.9681958382814421	1.0	13.487835825426954	-9.785392357661088	3.129324232148637	0.9960284494951794	0.8778431009258901	0.48208286378410825	0.04457419057589307	0.21726794309103223	4.032431856314334	0.04298001621750913	0.012033143889688078	1.639108273179796e-10	9.785392357661088	-0.1181853485692893	
VLTANSNPSS(ph)PSAAK	ddPTM_K562_Methotrexat_30min_R1	1	VLTANSNPSSPSAAK	15	0	Q9NV56	Q9NV56	MRGBP	MRG/MORF4L-binding protein	1	VLTANSNPS(0.089)S(0.91)PS(0.001)AAK	120.32	0.00070274	9230300.0	1923.0	1794.3	3699.0	1972.8	2075.6	1622.0	1451.6	2332.6	2363.3	3045.9	True	False	1838.4672225351856	2090.7775771147844	2922.630449825899	1799.8476869695949	2348.577780969662	1935.4285441958198	1777.1582514302252	2250.561135869735	2253.430698833966	2494.2579946255382	0.737079815518921	0.8382362937674664	1.171743442788753	0.7215964390403027	0.9415937669760793	0.7759536296430253	0.7124997715791742	0.9022968516966148	0.9034473192787229	1.0	11.28439498331662	-10.032505516552874	2.081893027668308	0.9978330460537057	0.8514825305677094	0.11428539967346285	0.12958358815900378	0.8404963217516304	8.344341565699215	0.1251166171767352	0.03481291844391402	9.278857037398248e-11	10.032505516552874	-0.1463505154859963	
VLTLSDDLER	ddPTM_K562_Methotrexat_30min_R1	1	VLTLSDDLER	10	0	P55010	P55010	EIF5	Eukaryotic translation initiation factor 5	0		80.688	0.023278	0.0	375.1	379.91	603.06	637.12	637.12	355.02	572.69	487.2	631.13	734.48	False	True	358.6110531320583	442.6836701341343	476.48594730251574	581.2646787926143	720.9124473941957	423.6225904811346	701.130310699625	470.06489985241143	601.788904055804	601.458554743283	0.5962356845770066	0.7360169152853472	0.7922174247000134	0.966425157990665	1.198607022393918	0.7043254886647126	1.1657167483450033	0.7815416309990744	1.0005492470094834	1.0	9.232321517489646	-6.898340363229819	1.834862254568145	0.9700344265442155	0.6314538931757733	0.43835853616032483	0.14358030975095204	0.3469629931635977	2.234375432802443	0.04010190947375484	0.13183333543622874	1.2637455425514045e-07	6.898340363229819	-0.3385805333684422	
VLTSFGDAIK	ddPTM_K562_Methotrexat_30min_R1	1	VLTSFGDAIK	10	0	P02100	P02100	HBE1	Hemoglobin subunit epsilon	0		83.948	0.017443	0.0	933.74	738.83	1487.2	1281.1	797.5	746.09	686.14	969.03	890.75	1043.9	False	True	892.6939076287072	860.9090995372653	1175.057043790505	1168.787952036065	902.3852285234657	890.2613332546605	840.024361143797	934.9486656485672	849.3392269226737	854.8395944021804	1.0442823583212704	1.0071001684700034	1.3745936097078704	1.3672599627927153	1.055619363483667	1.0414367082250697	0.9826689903516411	1.0937124014504849	0.9935656145135002	1.0	9.7395099219708	-7.971114778912776	24.87309659905488	1.0281993206425666	1.1990176967592658	0.35436488752412765	0.1133325294710355	252.41890209487104	217357.1653354493	0.03875782306935949	0.04394666517910631	1.0687723779509657e-08	7.971114778912776	0.17081837611669926	
VLVLDYS(ph)GRPMVISSGMQS(ph)MDTMK	ddPTM_K562_Methotrexat_30min_R1	1	VLVLDYSGRPMVISSGMQSMDTMK	24	1	Q5TBR1	Q5TBR1	NANS		2	VLVLDY(0.479)S(0.519)GRPMVIS(0.125)S(0.126)GMQS(0.627)MDT(0.125)MK	41.136	0.031356999999999996	0.0	253.94	379.13	489.75	406.87	415.95	232.08	163.83	448.97	555.72	470.88	True	False	242.7771016591705	441.77478839186745	386.9581678297471	371.2003388064271	470.65471574211386	276.92617542353	200.57304790011978	433.1794706213815	529.8846984961752	385.59906907950807	0.6296101861415838	1.145684271091371	1.0035246421976158	0.9626588043704223	1.2205805290600114	0.7181712758918244	0.5201595750190021	1.1233934554236764	1.3741856269547073	1.0	8.590957758365425	-9.505837265915234	24.454758935536248	1.2076584878970686	0.9034050063556428	0.2475323982392965	0.22357102744801394	753.9876456542157	1081993.1481516217	0.1302726422107407	0.06011889555666916	3.1200584793176005e-10	9.505837265915234	-0.30425348154142584	
VLY(ph)DFVMDDT(ph)ISPY(ph)S(ph)RMK	ddPTM_K562_Methotrexat_30min_R1	1	VLYDFVMDDTISPYSRMK	18	1	O15121	O15121	DEGS1	Sphingolipid delta(4)-desaturase DES1	4	VLY(0.998)DFVMDDT(0.942)IS(0.203)PY(0.929)S(0.928)RMK	44.733999999999995	0.030345	13219000.0	1552.4	1852.2	1815.9	1679.7	2024.3	1695.1	1923.1	1832.8	1925.5	1992.3	True	False	1484.1583547912744	2158.2445679830576	1434.7674057417823	1532.4433089024888	2290.5309317868987	2022.6540846278267	2354.404128772021	1768.3393851590713	1835.983925276012	1631.4751642182819	0.9097033086019461	1.3228792048557945	0.8794295109170407	0.9392991953001969	1.4039631016291947	1.2397700737277098	1.443113680434191	1.0838898586644239	1.125352052880143	1.0	10.671961310258066	-7.746276294215697	24.97556568029268	1.2327520251439343	1.0254458810112694	0.248849479225136	0.1709057633106912	344.06812603445184	566722.594708037	0.05056033712047569	0.0650176600787171	1.793592196677476e-08	7.746276294215697	-0.2073061441326649	
VMDS(ph)DEDDDY	ddPTM_K562_Methotrexat_30min_R1	3	VMDSDEDDDY	10	0	O14737;K7EQA1	O14737	PDCD5	Programmed cell death protein 5	1	VMDS(1)DEDDDY;VMDS(1)DEDDDY;VMDS(1)DEDDDY	191.4	3.3171e-06	127210000.0	8535.5	7477.0	10732.5	9190.0	8551.1	7537.5	6946.4	8298.5	8233.0	9830.7	True	False	8160.289640119119	8712.447162730445	8479.894918290474	8384.326968395471	9675.719533074627	8994.01519844389	8504.30702516872	8006.637051365426	7850.249627004628	8050.264968569324	1.013667211201043	1.0822559501763582	1.053368423449235	1.0414970191826514	1.201913175634786	1.1172321946618222	1.0564008834954022	0.994580561338759	0.9751541915271588	1.0	12.974820553920377	-9.1737339647231	3.251529383968076	0.986984891475281	1.0867009448394358	0.4368646650537281	0.0481243364625247	0.25693158083524636	5.191463350705992	0.028305996685020766	0.014605940293831597	6.702950855795468e-10	9.1737339647231	0.09971605336415479	
VMHSSPS(ph)SPSSDGK	ddPTM_K562_Methotrexat_30min_R1	1	VMHSSPSSPSSDGK	14	0	H7C428;A0A0A0MSB4;Q6ZN50;Q969R2-5;Q969R2-4;Q969R2-6;Q969R2-3;Q969R2-2;Q969R2	H7C428	OSBP2	Oxysterol-binding protein;Oxysterol-binding protein 2	1	VMHS(0.02)S(0.146)PS(0.531)S(0.274)PS(0.021)S(0.007)DGK	83.243	0.024181	1353400.0	1161.0	979.81	1766.8	902.36	836.82	837.73	562.88	1019.0	1000.6	1254.1	True	False	1109.9638301421473	1141.7069485776278	1395.9728247505811	823.2514998042807	946.8764977216393	999.6094662941825	689.1201684796397	983.1611924253018	954.0823243994693	1026.9703375225347	1.0808139140803485	1.1117233934252513	1.3593117286310614	0.8016312348322486	0.9220095879359925	0.9733576811046387	0.6710224660841466	0.9573413724850922	0.9290261748952744	1.0	10.004178796866245	-7.27361623868721	24.90732546861068	0.8869540227508517	1.1767270580309943	0.578300801127531	0.11351949366570897	486.6194796254747	995361.2182166014	0.0317385736418785	0.04746182530170398	5.32578660849837e-08	7.27361623868721	0.28977303528014264	
VMTIPYQPMPASS(ph)PVICAGGQDR	ddPTM_K562_Methotrexat_30min_R1	1	VMTIPYQPMPASSPVICAGGQDR	23	0	Q15365	Q15365	PCBP1	Poly(rC)-binding protein 1	1	VMTIPYQPMPAS(0.057)S(0.943)PVICAGGQDR	117.94	7.219499999999999e-07	91627000.0	4001.3	2915.7	3469.4	3698.9	3299.2	3208.6	2803.9	3700.5	3953.7	4462.8	True	False	3825.4076430213395	3397.4698665739156	2741.2203521562515	3374.6231799127313	3733.102628143723	3828.6165393999445	3432.7459501138146	3570.351317536632	3769.8933499682034	3654.543674583818	1.0467538449809277	0.9296563864326569	0.7500855363203243	0.9234048024606071	1.02149624154344	1.0476319016315903	0.9393090508091242	0.9769622791396045	1.0315633593837188	1.0	11.835475559645536	-7.661860539847126	5.613675306525263	1.0004494587865786	0.8996860488179586	0.267190695580956	0.07278955285829561	0.28569708300284985	13.437040248891783	0.022886390867165016	0.02958647200204975	2.1784091883442547e-08	7.661860539847126	-0.1007634099686201	
VNDAEPGS(ph)PEAPQGK	ddPTM_K562_Methotrexat_30min_R1	4	VNDAEPGSPEAPQGK	15	0	Q8N8A6	Q8N8A6	DDX51	ATP-dependent RNA helicase DDX51	1	VNDAEPGS(1)PEAPQGK;VNDAEPGS(1)PEAPQGK;VNDAEPGS(1)PEAPQGK;VNDAEPGS(1)PEAPQGK	216.72	5.7465000000000006e-27	222699000.0	29752.7	22665.2	45230.399999999994	32569.600000000002	20619.4	18953.8	18282.6	26492.6	26214.6	33346.6	True	False	28444.806932877054	26410.239057471994	35737.1571499879	29714.273735566177	23331.212515381532	22616.353601096613	22382.938445576085	25560.840241851358	24995.88896782163	27307.20760483929	1.0416593063816662	0.9671526814331489	1.3087078571759452	1.0881476482531416	0.8543975954263027	0.8282191986956814	0.8196714497314422	0.9360473839632565	0.9153586602312257	1.0	14.73699417330766	-7.735075980582296	7.724527716078679	0.8821908937881981	1.1074971003346428	0.5358576641298858	0.09503195654215371	0.14903934480015843	33.618191587003906	0.029283084248004906	0.037114751170338085	1.8404499833442615e-08	7.735075980582296	0.22530620654644462	
VNFSEEGET(ph)EEDDQDSSHSSVTTVK	ddPTM_K562_Methotrexat_30min_R1	1	VNFSEEGETEEDDQDSSHSSVTTVK	25	0	A0A0A0MSK5;Q5JTV8;J3KN66;Q5JTV8-2;Q5JTV8-3;H0YD16	A0A0A0MSK5	TOR1AIP1	Torsin-1A-interacting protein 1	1	VNFS(0.006)EEGET(0.824)EEDDQDS(0.131)S(0.036)HS(0.002)S(0.001)VTTVK	104.5	5.1806e-07	43564000.0	2754.2	1500.0	3071.6	3531.8	1745.5	1519.5	1602.8	1766.8	2180.6	2742.0	True	False	2633.1286657859623	1747.849504359458	2426.9131358976033	3222.1725774732467	1975.063845000263	1813.121869855456	1962.26870032541	1704.6606425682276	2079.2243819563087	2245.397229476749	1.1726783266761076	0.7784143853988651	1.0808391067905403	1.4350122709575617	0.8796055410919508	0.8074837922009784	0.8739071530709436	0.7591799883735803	0.9259940088377306	1.0	11.132754976978982	-7.960831742842173	24.999990929357494	0.8566588696369724	1.098419125676574	0.34800620137693006	0.16096376309471455	188.01957110771014	120006.87821292719	0.05147253164059132	0.058364284715276514	1.0943802759860454e-08	7.960831742842173	0.24176025603960172	
VNFSEEGETEEDDQDS(ph)SHSSVTTVK	ddPTM_K562_Methotrexat_30min_R1	1	VNFSEEGETEEDDQDSSHSSVTTVK	25	0	A0A0A0MSK5;Q5JTV8;J3KN66;Q5JTV8-2;Q5JTV8-3;H0YD16	A0A0A0MSK5	TOR1AIP1	Torsin-1A-interacting protein 1	1	VNFS(0.023)EEGET(0.157)EEDDQDS(0.689)S(0.109)HS(0.018)S(0.003)VT(0.001)TVK	86.85600000000001	0.00018524	33863000.0	3517.3	2060.9	3358.1	3852.9	1841.1	1846.2	1869.0	2190.2	2786.6	3841.9	True	False	3362.683703496102	2401.428695689605	2653.2807011517566	3515.1222390131566	2083.236920670286	2202.9520211432327	2288.170826621034	2113.169424582823	2657.051574227026	3146.094681227834	1.06884377115559	0.7633046487820238	0.843356913885457	1.1172970285946071	0.6621659968152186	0.7002179668297464	0.7273051381047515	0.6716801745324814	0.8445555024396316	1.0	11.619346373750849	-6.2559464164106995	24.13245758447729	0.8034897887461305	1.06884395882643	0.2260146418177379	0.1399275667489688	565.6961914828486	2485169.3434796	0.035882627226426454	0.29913197018420146	5.546941473292854e-07	6.2559464164106995	0.2653541700802995	
VNGDDHHEEDMDMS(ph)D	ddPTM_K562_Methotrexat_30min_R1	8	VNGDDHHEEDMDMSD	15	0	Q5T757;Q05519-2;Q05519	Q5T757	SRSF11	Serine/arginine-rich splicing factor 11	1	VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D	98.654	0.002154	2039187600.0	26924.85	22973.66	33029.5	29362.480000000003	21610.969999999998	21737.530000000006	20706.509999999995	23809.9	24905.960000000003	28442.380000000005	True	False	25741.26583290508	26769.66682954846	26097.05932482414	26788.316966591152	24453.191350550183	25938.0000260869	25350.471965295164	22972.4923214202	23748.087355786734	23291.189369702748	1.1051932739162473	1.149347352109486	1.1204691572673087	1.1501480899656193	1.0498901950605826	1.1136399955524439	1.088414660277982	0.9863168409640295	1.019616773485957	1.0	14.507496692518574	-9.140163169827812	3.6387822626311843	1.002059464001984	1.114629681494061	0.7722251668212812	0.027376959227442384	0.1172598609691109	2.78285060483243	0.014651638032628063	0.007935250375113645	7.241638316164819e-10	9.140163169827812	0.11257021749207707	
VNGTTVS(ph)SPSTSLQR	ddPTM_K562_Methotrexat_30min_R1	1	VNGTTVSSPSTSLQR	15	0	A0A075B6G3;A0A5H1ZRR9;A0A087WTU7;A0A5H1ZRP8;A0A087WV90;H0Y304;A0A5H1ZRQ8;A0A5H1ZRQ1;A0A5H1ZRP9;A0A5H1ZRP7;P11532-16;P11532-2;P11532;P11532-7;P11532-5;P11532-11;P11532-6;P11532-4;P11532-3;P11532-13;P11532-17;P11532-14;P11532-8;P11532-15;P11532-12;P11532-9	A0A075B6G3	DMD	Dystrophin	1	VNGT(0.003)T(0.027)VS(0.485)S(0.485)PS(0.001)TSLQR	81.327	0.027735000000000003	13516000.0	1760.1	1678.9	1944.4	2041.4	1295.1	1378.7	1266.6	1583.9	1788.4	1602.7	True	False	1682.728111484233	1956.3096885793968	1536.297011798183	1862.433631477968	1465.4283504209927	1645.1142625664472	1550.667292133868	1528.193339236933	1705.2576743514005	1312.435499519469	1.2821415697002572	1.4905949201280169	1.1705695345490714	1.41906679007073	1.116571710348844	1.253481990672139	1.1815188576517661	1.1643950043994247	1.2993077945360043	1.0	10.358030807014202	-6.802004858689573	0.03128026901145586	4.726241471554173e-10	2.6363399372726017	0.4150556124632717	0.10460922488965854	474.9734459388886	2.7935232562907886	96.74130122202894	141.0353546235967	1.577593620199139e-07	6.802004858689573	2.6363399367999776	
VNLEESSGVENS(ph)PAGARPK	ddPTM_K562_Methotrexat_30min_R1	1	VNLEESSGVENSPAGARPK	19	1	Q8WVM8-2;Q8WVM8-3;Q8WVM8	Q8WVM8-2	SCFD1	Sec1 family domain-containing protein 1	1	VNLEESS(0.001)GVENS(0.999)PAGARPK	103.53	0.00037764	42961000.0	1930.2	1022.8	2199.6	1838.6	1604.2	1388.6	1080.7	1566.4	1817.4	2321.8	True	False	1845.350719156221	1191.8003153725685	1737.9340193125286	1677.4127926106542	1815.1804183038812	1656.9272974539551	1323.0744849274224	1511.3088241560288	1732.909470681188	1901.2995212979986	0.9705733886139192	0.6268345949821404	0.9140769246741608	0.8822454188940735	0.9547051361295643	0.871470948629276	0.6958790396287338	0.7948820305410234	0.9114342328862249	1.0	10.892770109574707	-10.012588461168713	4.885935668750214	0.9998360893473979	0.8363259695915561	0.19378892226769673	0.10334937383535896	0.25852244392736795	21.990767614794507	0.10004896467556	0.02609743470593229	9.714300614480837e-11	10.012588461168713	-0.16351011975584173	
VNLT(ph)GT(ph)IQLLEIMK	ddPTM_K562_Methotrexat_30min_R1	1	VNLTGTIQLLEIMK	14	0	Q5QPP1;Q5QPP3;Q5QPP4;Q14376-2;Q14376	Q5QPP1	GALE	UDP-glucose 4-epimerase	2	VNLT(1)GT(1)IQLLEIMK	90.861	0.010104	137980000.0	1342.2	1797.0	1466.8	1199.9	1732.0	1658.2	1500.1	2061.6	2022.5	1714.9	True	False	1283.1984951049012	2093.9237062226307	1158.9387250080094	1094.7066299649327	1959.7883583732203	1978.6236818652949	1836.535611029542	1989.0923594739959	1928.4744164480571	1404.3149922792404	0.9137540382035202	1.4910641257373014	0.8252697801986869	0.7795306864795304	1.3955475581674393	1.4089600216073577	1.3077803919537996	1.4164146722137079	1.3732491834457254	1.0	10.455650857647475	-7.785719448768813	24.99973248870053	1.3419506159872974	1.0246563216827318	0.334262795979007	0.2148633365756847	268.4868284230688	276443.19923989696	0.06710519995080445	0.07612561509354872	1.637874235179488e-08	7.785719448768813	-0.31729429430456557	
VNPSVNPS(ph)ISPAHGVAR	ddPTM_K562_Methotrexat_30min_R1	1	VNPSVNPSISPAHGVAR	17	0	Q15788-2;Q15788-3;Q15788;B5MCN7	Q15788-2	NCOA1	Nuclear receptor coactivator 1	1	VNPSVNPS(0.5)IS(0.5)PAHGVAR	149.24	4.4344999999999995e-10	42828000.0	767.76	613.74	958.42	954.99	722.04	765.52	707.16	748.2	979.51	1081.0	True	False	734.0101896898665	715.150103203716	757.2607395842496	871.2675094176273	817.0009158659351	913.4459057662046	865.7586312216849	721.8853819162026	933.9727938961869	885.2204248958295	0.8291835220320892	0.8078779963621749	0.8554487879935239	0.9842379196347122	0.9229350034055955	1.0318852571366015	0.9780147485001436	0.8154865857293705	1.0550737055192716	1.0	9.789892928934405	-7.138873342134081	3.849077280027763	0.9629517771446298	0.8206473273693525	0.5107349158572809	0.06253580788779654	0.19665422652864478	5.097508998104212	0.017067206400094608	0.03153955185388694	7.263177502319603e-08	7.138873342134081	-0.14230444977527723	
VNPSVNPSIS(ph)PAHGVAR	ddPTM_K562_Methotrexat_30min_R1	2	VNPSVNPSISPAHGVAR	17	0	Q15788-2;Q15788-3;Q15788;B5MCN7	Q15788-2	NCOA1	Nuclear receptor coactivator 1	1	VNPSVNPS(0.093)IS(0.907)PAHGVAR;VNPSVNPS(0.169)IS(0.831)PAHGVAR	133.21	1.5080999999999998e-05	41669000.0	3084.5	2876.1000000000004	4093.5	3523.7	2732.7	3089.0	2873.5	3439.7	3247.3	3925.5	True	False	2948.909073276017	3351.3266396588265	3234.33029098738	3214.782691897186	3092.0979485718813	3685.9055320720618	3517.955521827469	3318.7238013594815	3096.3337317833284	3214.553911127272	0.9173618345824851	1.0425479653827274	1.0061521381836689	1.000071170301149	0.9619057679724997	1.1466304918120032	1.0943837369315734	1.0324057063941663	0.9632234572471406	1.0	11.650402830968947														
VNQSALEAVTPS(ph)PSFQQR	ddPTM_K562_Methotrexat_30min_R1	3	VNQSALEAVTPSPSFQQR	18	0	Q9UKG1	Q9UKG1	APPL1	DCC-interacting protein 13-alpha	1	VNQSALEAVTPS(0.997)PS(0.003)FQQR;VNQSALEAVT(0.004)PS(0.994)PS(0.002)FQQR;VNQSALEAVTPS(0.976)PS(0.024)FQQR	175.33	6.3954e-12	109524000.0	7210.400000000001	6376.5	7982.700000000001	8421.3	6767.500000000001	6339.400000000001	6155.200000000001	8079.0	8695.4	8543.8	True	False	6893.439449489188	7430.108243032061	6307.240360050072	7683.017703911728	7657.544870260257	7564.399329885932	7535.660284653715	7794.856990779212	8291.152751931986	6996.435028885284	0.9852788485891927	1.0619848840668606	0.9014934511662265	1.0981332167299258	1.094492386286092	1.0811791003069087	1.077071430455968	1.1141183986698349	1.1850539192747975	1.0	12.772404281540712	-7.304383630952688	24.028740647696463	1.0965419924886446	0.9908256341248964	0.4461649895881079	0.055821276477742106	262.84792819936274	147071.3915485953	0.015185554873436495	0.02252403875088621	4.961538538297408e-08	7.304383630952688	-0.10571635836374815	
VNVTVDYIRPAS(ph)PATETVPAFSER	ddPTM_K562_Methotrexat_30min_R1	1	VNVTVDYIRPASPATETVPAFSER	24	1	Q7KZF4	Q7KZF4	SND1	Staphylococcal nuclease domain-containing protein 1	1	VNVT(0.003)VDY(0.055)IRPAS(0.369)PAT(0.241)ET(0.332)VPAFSER	62.193000000000005	0.0051229	98999000.0	2365.2	1865.9	2473.6	2142.4	2365.3	2061.8	1865.9	2710.1	2706.9	2571.4	True	False	2261.228640010516	2174.208260122876	1954.425163744077	1954.5791182905823	2676.3784088107277	2460.213669804526	2284.3755727085004	2614.7842469006964	2581.056809831027	2105.694542624549	1.0738635610424807	1.0325373486569096	0.9281617652425841	0.9282348786706663	1.2710193024838614	1.1683620867146773	1.0848561016173042	1.2417680693808588	1.2257508188314834	1.0	11.040080455212596	-7.754462058428333	24.99991429244255	1.1735127732582613	0.9892208294193863	0.5047459057102438	0.08448467941753589	131.75703645360534	472086.1215434171	0.02521709223615299	0.03184199769337293	1.7601024261403696e-08	7.754462058428333	-0.18429194383887504	
VNVTVDYIRPASPATET(ph)VPAFSER	ddPTM_K562_Methotrexat_30min_R1	1	VNVTVDYIRPASPATETVPAFSER	24	1	Q7KZF4	Q7KZF4	SND1	Staphylococcal nuclease domain-containing protein 1	1	VNVTVDY(0.012)IRPAS(0.36)PAT(0.264)ET(0.363)VPAFSER	66.437	0.021912	174980000.0	2049.7	1608.9	2283.2	1589.7	1691.6	1628.9	1410.2	2087.5	2304.8	2436.4	True	False	1959.5976422414813	1874.7433783759539	1803.987521774126	1450.3334691684738	1914.0750502448852	1943.6618715416598	1726.4732475660685	2014.0814417937368	2197.6503510652587	1995.1443508012937	0.9821833901163411	0.9396530018607505	0.9041889731184638	0.7269315969974744	0.9593666991945473	0.974196113058708	0.8653375114801488	1.0094915894104792	1.1014994229277868	1.0	10.962277415396068	-9.42491461511298	4.662673644155799	1.0526189426160644	0.9065830122267223	0.40364827827950933	0.07313678760440076	0.22576005915846986	7.989954642310793	0.045274003548490614	0.02025012929154882	3.759113034293999e-10	9.42491461511298	-0.14603593038934204	
VPAEDETQS(ph)IDSEDS(ph)FVPGR	ddPTM_K562_Methotrexat_30min_R1	1	VPAEDETQSIDSEDSFVPGR	20	0	J3KSI3;Q8WZ73-2;Q8WZ73	J3KSI3	RFFL	E3 ubiquitin-protein ligase rififylin	2	VPAEDET(0.011)QS(0.984)IDS(0.008)EDS(0.997)FVPGR	127.67	3.1425999999999998e-06	6907500.0	452.76	545.0	525.48	428.77	523.0	454.15	486.3	461.39	543.1	536.35	True	False	432.85721251951634	635.0519865839365	415.188929109087	391.1803998083708	591.7836671069255	541.9080600163569	595.3651540855047	445.1626521816583	517.8513995416266	439.2118176622373	0.9855317983551896	1.4458900262840928	0.9453045487687118	0.8906417907661955	1.347376466910139	1.233819396984202	1.3555308171223945	1.0135488943605733	1.1790470536470508	1.0	8.778773062545282	-5.995881846666635	19.527153812186636	1.1603271582926602	0.7752520227445397	0.0744875911665579	0.18072166031387535	72921198.16265404	2459843112.67864	0.0453064005959537	684656361.2174777	1.0095274988570434e-06	5.995881846666635	-0.38507513554812045	
VPAQCTVPSHPQSTPVHS(ph)PDR	ddPTM_K562_Methotrexat_30min_R1	1	VPAQCTVPSHPQSTPVHSPDR	21	0	Q9NXL9-4;Q9NXL9	Q9NXL9-4	MCM9	DNA helicase MCM9	1	VPAQCTVPSHPQS(0.001)T(0.001)PVHS(0.998)PDR	154.92	1.6591999999999997e-34	0.0	408.52	191.8	455.33	359.3	288.39	335.14	279.75	253.04	436.85	436.99	True	False	390.56194994803616	223.49168995742937	359.7624554526161	327.8007268492374	326.3183398794764	399.9010618383399	342.49105871976127	244.14043977556267	416.54093885059797	357.8468764803224	1.0914219897334012	0.6245455937903622	1.0053530688632377	0.9160362948347902	0.9118937772743708	1.117520057102776	0.9570883001366493	0.6822483464907027	1.1640200494344768	1.0	8.48319857670612	-8.024807925578653	24.709713056985994	0.9684100328895071	0.8981186773560351	0.043165437960531405	0.1635666086586383	2596.372974375875	2586087.632142128	0.05260905523451859	0.05286354852541898	9.444784962608203e-09	8.024807925578653	-0.07029135553347199	
VPAS(ph)PLPGLER	ddPTM_K562_Methotrexat_30min_R1	4	VPASPLPGLER	11	0	Q7KZI7-10;Q7KZI7-13;Q7KZI7-7;Q7KZI7-2;Q7KZI7-15;Q7KZI7-5;Q7KZI7-4;Q7KZI7-16;Q7KZI7-9;Q7KZI7;Q7KZI7-11;E9PC69;E7ETY4;Q7KZI7-8;Q7KZI7-14;Q7KZI7-6;Q7KZI7-3;Q7KZI7-12	Q7KZI7-10	MARK2	Serine/threonine-protein kinase MARK2	1	VPAS(1)PLPGLER;VPAS(1)PLPGLER;VPAS(1)PLPGLER;VPAS(1)PLPGLER	113.95	0.0022831	796984000.0	6743.6	6151.200000000001	7698.6	7423.0	5865.6	6048.9	5900.199999999999	6276.1	6097.9	7348.700000000001	True	False	6447.159418558649	7167.581247477271	6082.769067593857	6772.237114950986	6637.029211820993	7217.76431626763	7223.470043461436	6055.366005672653	5814.409959979539	6017.779219641057	1.07135193619536	1.1910674994661563	1.010799639797466	1.1253714813676614	1.102903408313619	1.199406633714646	1.2003547787006208	1.0062459563004436	0.9662052640619061	1.0	12.55501546269063	-9.391215190210161	6.167151585941835	0.9845022494965848	1.1279198747858152	0.5526105093178629	0.05705890391490189	0.18229802634512188	8.290413484549806	0.03279464326513082	0.01540805107062093	4.062419889132622e-10	9.391215190210161	0.1434176252892304	
VPEASSEPFDTS(ph)SPQAGR	ddPTM_K562_Methotrexat_30min_R1	1	VPEASSEPFDTSSPQAGR	18	0	H0Y6F5;Q9H4I2	H0Y6F5	ZHX3	Zinc fingers and homeoboxes protein 3	1	VPEASS(0.002)EPFDT(0.126)S(0.499)S(0.373)PQAGR	91.14	0.0037226	16575000.0	971.53	680.85	1158.0	936.11	753.44	710.22	642.11	905.35	1012.2	1180.5	True	False	928.822704477176	793.3488900287585	914.951625006323	854.0426897045357	852.5305662429093	847.4599634147685	786.1195128312636	873.5083273427348	965.143042931384	966.7000107211169	0.960817931288026	0.820677439981566	0.9464690336806846	0.8834619636214304	0.8818977519271547	0.8766524816551927	0.8131990318742751	0.903598135569622	0.9983893992216143	1.0	9.916924447428398	-9.720988162130995	4.395378600010239	1.0019177424999297	0.8816143620619906	0.5229548421253708	0.043572899848415635	0.14550850341636618	5.891344587602498	0.03388636623334796	0.010732708737738048	1.9011300996523085e-10	9.720988162130995	-0.12030338043793909	
VPEEAAQDRPMS(ph)PGDCPPETTETPK	ddPTM_K562_Methotrexat_30min_R1	2	VPEEAAQDRPMSPGDCPPETTETPK	25	1	P13994	P13994	CCDC130	Coiled-coil domain-containing protein 130	1	VPEEAAQDRPMS(0.999)PGDCPPETTETPK;VPEEAAQDRPMS(0.997)PGDCPPET(0.001)T(0.001)ET(0.001)PK	67.895	0.0023710000000000003	30342000.0	1517.04	894.31	1596.46	1209.55	901.76	957.67	1125.77	1302.51	1167.62	1671.68	True	False	1450.3527380524065	1042.0795268291386	1261.3848629167492	1103.510629447524	1020.3572459853558	1142.7261738101174	1378.2525797138371	1256.6999850303046	1113.337601054676	1368.922553089603	1.0594848735445397	0.7612406738987586	0.9214435543266157	0.8061161874767458	0.7453725148164523	0.8347632020752602	1.0068155985911522	0.9180212439293832	0.8132948051311726	1.0	10.418825112971462	-8.720153281099062	24.99983391807029	0.9277015770559986	0.8463379369005158	0.13386680678694074	0.09743127147945614	296.98909978737106	179834.35540263116	0.03660646522870137	0.02835498109137358	1.9047883180385277e-09	8.720153281099062	-0.08136364015548281	
VPEVVQTS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	1	VPEVVQTSSPR	11	0	K7EKN5;A0A590UJ23;A0A590UJ36;A6NDB9	K7EKN5	PALM3	Paralemmin-3	1	VPEVVQT(0.036)S(0.482)S(0.482)PR	97.779	0.009200700000000001	24236000.0	1029.1	916.92	1358.7	1081.8	1030.8	957.21	828.91	1074.3	1060.3	1021.1	True	False	983.8619962095476	1068.4254450248488	1073.5274377341036	986.9602736028528	1166.3682677893278	1142.1772853203954	1014.8141679478016	1036.516260080964	1011.0068844300998	836.1688953386973	1.1766307042682158	1.2777627235130218	1.2838643529059548	1.1803360291261207	1.3948955459732575	1.365964808889174	1.2136473547449316	1.239601551623269	1.209094107740737	1.0	9.707650567316971	-10.386133758574378	1.0593088344536385	1.000102253648031	1.275510997803419	0.5900847497413487	0.06705685054886575	0.963565227747985	1.7768064013295135	0.06730977991459601	0.021312981989189256	4.110231103950307e-11	10.386133758574378	0.27540874415538785	
VPGEDGTLPPT(ph)QGSPLR	ddPTM_K562_Methotrexat_30min_R1	1	VPGEDGTLPPTQGSPLR	17	0	Q9Y2F5	Q9Y2F5	ICE1	Little elongation complex subunit 1	1	VPGEDGTLPPT(0.982)QGS(0.018)PLR	103.46	0.0026704999999999997	11188000.0	360.06	401.63	386.97	474.25	492.56	308.21	359.27	358.37	521.93	349.39	True	False	344.23219352367056	467.9925309572592	305.7502852579423	432.6732388206261	557.3402735567629	367.76722047262234	439.8454429535252	345.7659239739504	497.66558822088285	286.1120853416779	1.2031375504903437	1.6356964802740779	1.0686381349211875	1.5122508310123406	1.9479787891209892	1.2853956170129306	1.5373186435947204	1.2084981435196394	1.7394077835844146	1.0	8.160436627995992	-12.276523736479794	4.293026543515859	0.9996428811928412	1.4591394870647676	0.22153139710384318	0.2585837700963243	0.0008605015116774075	0.0001450153883736404	0.2419538904008279	0.05863725156785924	5.290250824135922e-13	12.276523736479794	0.4594966058719264	
VPGEDGTLPPTQGS(ph)PLR	ddPTM_K562_Methotrexat_30min_R1	3	VPGEDGTLPPTQGSPLR	17	0	Q9Y2F5	Q9Y2F5	ICE1	Little elongation complex subunit 1	1	VPGEDGTLPPT(0.262)QGS(0.738)PLR;VPGEDGTLPPT(0.035)QGS(0.965)PLR;VPGEDGTLPPT(0.267)QGS(0.733)PLR	155.24	5.768199999999999e-11	66472000.0	2004.73	1695.25	2088.59	1642.1999999999998	1416.1599999999999	1796.5	1596.17	1967.32	1899.53	1987.15	True	False	1916.6044695959229	1975.3612481769148	1650.2235012711212	1498.230875679982	1602.4098623520908	2143.648199536246	1954.1517540544119	1898.1282405124089	1811.2212649075796	1627.257879122802	1.1778123763819768	1.2139202234139823	1.0141130809338585	0.9207089391926165	0.984730129692716	1.3173377293412227	1.2008863371476357	1.1664581655217572	1.1130511568848238	1.0	10.668227184382134	-8.236375749138798	24.978800885450152	1.1725340848120764	1.0601442572258286	0.15981009247233746	0.10947890974528766	1386.5678077840373	1381876.0974267088	0.03897041740019347	0.03895395671817132	5.8026216072567844e-09	8.236375749138798	-0.11238982758624783	
VPLAPITDPQQLQLS(ph)PLK	ddPTM_K562_Methotrexat_30min_R1	2	VPLAPITDPQQLQLSPLK	18	0	A0A286YFD6;P31350;P31350-2	A0A286YFD6	RRM2	Ribonucleoside-diphosphate reductase subunit M2	1	VPLAPITDPQQLQLS(1)PLK;VPLAPITDPQQLQLS(1)PLK	171.78	3.3825e-12	199692000.0	2641.7	1735.69	2559.9	1879.94	2033.48	1493.8799999999999	1494.7	2902.5	3129.6	4161.4	True	False	2525.5740310822675	2022.4832708144456	2022.6119731033582	1715.1285789951448	2300.91826269329	1782.551167449599	1829.9245235689978	2800.4174298473404	2984.105579093124	3407.7301352095333	0.7411308791700948	0.5934986605651764	0.5935364283119774	0.5033052826789307	0.6752055389948923	0.5230904727554062	0.5369922062377396	0.8217838029228653	0.875687176123657	1.0	11.734595374917589	-9.49681004020476	2.487893652369197	0.9448545440427019	0.5919436296230975	0.7858402215955266	0.07395626902905773	0.13314316683062438	1.549096973893291	0.05897203040764139	0.02030510170726164	3.1855905898820993e-10	9.49681004020476	-0.3529109144196043	
VPLDLS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	VPLDLSPR	8	0	Q9UKV5;R4GNG2	Q9UKV5	AMFR	E3 ubiquitin-protein ligase AMFR	1	VPLDLS(1)PR;VPLDLS(1)PR	88.134	0.02286	31633000.0	5435.9	4881.0	6141.3	5121.8	5093.7	4252.0	4314.5	6085.4	5453.3	5201.4	True	False	5196.9443447628755	5687.502287185675	4852.325055830171	4672.779746107499	5763.610832012511	5073.638822392497	5282.136453427743	5871.373032762448	5199.777273283659	4259.376057403486	1.220118692203696	1.3352900073943634	1.1392102952252932	1.097057334955304	1.3531584801004883	1.1911694938449238	1.2401197692433223	1.3784584769304533	1.2207837963134538	1.0	12.056426394733554	-10.041570902289973	23.37616372069253	0.9999999977754984	1.2443435955268962	0.41674734930406354	0.08618419546339175	4166.649287977435	2342985.8115807157	0.08477300495979702	0.021888295785755706	9.087179309775602e-11	10.041570902289973	0.2443435977513978	
VPLS(ph)PLSLLAGPADAR	ddPTM_K562_Methotrexat_30min_R1	1	VPLSPLSLLAGPADAR	16	0	Q53ET0;H0YDQ8;Q5T4K5	Q53ET0	CRTC2	CREB-regulated transcription coactivator 2	1	VPLS(0.997)PLS(0.003)LLAGPADAR	199.15	4.1797e-12	64988000.0	261.02	208.48	273.02	241.81	204.06	136.83	218.71	142.78	275.25	273.7	True	False	249.54587333652316	242.9277764459066	215.7168330390557	220.61089273424477	230.89746674921443	163.2704609755327	267.7612849065202	137.75834647152558	262.453687578407	224.1302777927738	1.113396528992161	1.0838686269354139	0.9624618108870726	0.9842975920380423	1.0301931047562323	0.7284623147903702	1.1946680633398703	0.6146351480405253	1.1709872051337316	1.0	7.8081937456773485	-6.553675437680574	0.9755768910549826	0.9398086539420879	1.1735657416358214	0.08986324720124239	0.16809592980480847	2.851692976001749	3.0141237814136894	0.05397202020255099	0.6373473120894204	2.7946315796323703e-07	6.553675437680574	0.2337570876937335	
VPLSNENSQVPQS(ph)PEDWR	ddPTM_K562_Methotrexat_30min_R1	2	VPLSNENSQVPQSPEDWR	18	0	Q8IZT6-2;Q8IZT6	Q8IZT6-2	ASPM	Abnormal spindle-like microcephaly-associated protein	1	VPLSNENS(0.004)QVPQS(0.996)PEDWR;VPLSNENS(0.003)QVPQS(0.997)PEDWR	154.56	1.0247e-14	29167000.0	261.28	0.0	331.207	137.83	55.519	189.086	220.377	211.40699999999998	136.89	130.867	True	False	249.79444404783834	0.0	261.6911769114588	125.74665789488007	62.820721633096326	225.62419340802148	269.80215209109895	203.97169598337175	130.5260137787761	107.1657181728423	2.330917464155442	0.0	2.4419299508578853	1.1733851089587202	0.5862016576212915	2.1053765817546553	2.5176162367143227	1.9033297164527545	1.2179829147251842	1.0	6.743699657772648	-8.29967798017821	24.992981994261314	1.853366397967646	1.2895892013237373	0.06508511282072982	0.7888429476012704	1300.1362151524768	849772.434403377	0.2692038648620475	0.23741998227883954	5.015589907634325e-09	8.29967798017821	-0.5637771966439087	
VPPELLGGS(ph)PPWK	ddPTM_K562_Methotrexat_30min_R1	2	VPPELLGGSPPWK	13	0	E7EVA0	E7EVA0	MAP4	Microtubule-associated protein	1	VPPELLGGS(1)PPWK;VPPELLGGS(1)PPWK	125.73	0.00075771	12055000.0	4872.7	2895.59	6070.0	4842.6	3547.16	3128.2	3339.0	4973.0	5037.2	6075.0	True	False	4658.50194240624	3374.0370308854685	4795.989951458018	4418.0567766215345	4013.6737143690275	3732.6803772832077	4087.8557464353316	4798.09677127677	4803.021671462133	4974.758632046407	0.9364277318696622	0.6782313033542154	0.964064853430919	0.8880947003461214	0.8068077290250302	0.7503239158655903	0.8217194137022401	0.964488355348214	0.9654783330636427	1.0	12.28041081458026	-9.281826990672688	6.810174185633179	0.9746922766827156	0.8316347636993613	0.39859764800003095	0.07960974136964857	0.18867073828863984	39.54380947266388	0.04243699950595274	0.021052204775432987	5.226043367458019e-10	9.281826990672688	-0.14305751298335434	
VPPPRS(ph)PQAQEAPVNIDEGLTGCTIQLLPAQDK	ddPTM_K562_Methotrexat_30min_R1	2	VPPPRSPQAQEAPVNIDEGLTGCTIQLLPAQDK	33	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	VPPPRS(0.998)PQAQEAPVNIDEGLT(0.001)GCT(0.001)IQLLPAQDK;VPPPRS(1)PQAQEAPVNIDEGLTGCTIQLLPAQDK	65.899	6.9845e-05	17750300.0	4813.1	3505.8	6964.700000000001	4657.0	3577.0	3214.2	3145.4	4606.5	5442.1	6043.2	True	False	4601.521887043214	4085.0738615889263	5502.9046482569465	4248.728040458948	4047.43819740243	3835.2986601443895	3850.836018220331	4444.486784010945	5189.097958839047	4948.717920194709	0.9298412156945419	0.8254812514002006	1.1119859197875706	0.8585512670101392	0.8178761171425147	0.7750085420090964	0.7781482154207767	0.8981087335517549	1.0485742049801214	1.0	12.272839094752566	-9.686168955123435	5.337185782516763	1.0236336770441536	0.8703146822502612	0.29729564186579327	0.09266731282879097	0.256636589119192	12.534706233036236	0.07285308953826035	0.025447615659669423	2.0598284150174403e-10	9.686168955123435	-0.15331899479389244	
VPS(ph)PGPPTLTSYSVLR	ddPTM_K562_Methotrexat_30min_R1	2	VPSPGPPTLTSYSVLR	16	0	F8W1U0;F8W130;Q12815	F8W1U0	TROAP	Tastin	1	VPS(1)PGPPTLTSYSVLR;VPS(0.982)PGPPT(0.012)LT(0.002)S(0.002)Y(0.001)S(0.002)VLR	143.88	5.9833e-08	27229000.0	507.71999999999997	434.76	360.28999999999996	460.85	556.21	159.49	326.88	524.55	591.8	737.46	True	False	485.4012367267622	506.5967003435453	284.6700526541695	420.44799601578364	629.3613642094513	190.30918527360748	400.19116094482797	506.10127918222975	564.2873471713036	603.8988478664927	0.8037790408801584	0.8388767458876515	0.4713869775706264	0.6962225503512377	1.042163545158125	0.3151342082303164	0.6626791264110847	0.8380563747889719	0.9344070603295037	1.0	9.238163110347644	-9.556666762869817	2.6832108878965393	0.9723637671909019	0.688044610682607	0.26389501895375267	0.1873051642537392	0.40535353500369686	5.560417717637986	0.15625159759982446	0.05151353850362476	2.775448908779469e-10	9.556666762869817	-0.28431915650829487	
VPS(ph)PPDEHQEAENAVSSGNR	ddPTM_K562_Methotrexat_30min_R1	1	VPSPPDEHQEAENAVSSGNR	20	0	Q9BXS6-7;Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6	Q9BXS6-7	NUSAP1	Nucleolar and spindle-associated protein 1	1	VPS(1)PPDEHQEAENAVSSGNR	58.123000000000005	0.026185000000000003	5732600.0	646.09	490.58	652.76	621.35	549.23	478.21	597.51	765.32	640.9	734.62	True	False	617.6886572063224	571.640006565775	515.7545964932019	566.8772102081094	621.4633718645061	570.6173145005447	731.5168275090069	738.4032618124946	611.1046988882869	601.5731993866557	1.0267888560130298	0.950241811218652	0.8573430415767331	0.9423245762711485	1.0330635947514448	0.9485417819183557	1.216006345121155	1.2274537206201115	1.0158442887936983	1.0	9.232596484893277	-8.745990408944857	24.94585489996788	1.1337805603405549	0.9571765059618688	0.4518497836802138	0.08261757875061905	189.7280878599114	306359.09264717426	0.03195282739647778	0.02465773146281997	1.7947732625635153e-09	8.745990408944857	-0.1766040543786861	
VPS(ph)S(ph)DEEVVEEPQSR	ddPTM_K562_Methotrexat_30min_R1	1	VPSSDEEVVEEPQSR	15	0	Q9C0C2	Q9C0C2	TNKS1BP1	182 kDa tankyrase-1-binding protein	2	VPS(0.998)S(0.943)DEEVVEEPQS(0.058)R	118.52	0.0015145999999999998	13284000.0	1331.8	889.81	1268.1	1119.0	767.22	867.76	1055.9	1122.7	1131.1	1589.8	True	False	1273.2556666522928	1036.835978316059	1001.9431396118467	1020.8990073595786	868.122877777773	1035.4423387862912	1292.7124536271526	1083.2140046475818	1078.5154078835094	1301.8718145230248	0.9780192277369364	0.7964194068491538	0.7696173528258887	0.7841778245530355	0.6668266937600403	0.7953489177931492	0.9929644679347882	0.8320435180820362	0.828434409480362	1.0	10.346371688882915	-8.640127861619028	11.197329738813705	0.8992814757553486	0.7899115439888914	0.2774401790365556	0.08915407147262304	0.540562479487119	50.35349988766843	0.03482490142730659	0.026962208782457503	2.2901932925243107e-09	8.640127861619028	-0.10936993176645715	
VPS(ph)SDEEVVEEPQS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	VPSSDEEVVEEPQSR	15	0	Q9C0C2	Q9C0C2	TNKS1BP1	182 kDa tankyrase-1-binding protein	2	VPS(0.914)S(0.472)DEEVVEEPQS(0.615)R	98.572	0.0067357	12848000.0	1399.5	1004.5	1230.5	1231.2	1488.5	828.59	1008.3	1367.5	1397.0	1402.2	True	False	1337.9796557139846	1170.4765514193832	972.2348657774452	1123.262607561317	1684.2638403224823	988.7032906505631	1234.4369419379275	1319.4042498936215	1332.0537749211069	1148.247992404193	1.1652357892762633	1.0193586743998118	0.8467115746850009	0.9782404280188971	1.4668119182128796	0.8610537942944047	1.0750612673428437	1.1490586167985044	1.1600749870522855	1.0	10.165218545816375														
VPS(ph)SDEEVVEEPQSR	ddPTM_K562_Methotrexat_30min_R1	1	VPSSDEEVVEEPQSR	15	0	Q9C0C2	Q9C0C2	TNKS1BP1	182 kDa tankyrase-1-binding protein	1	VPS(0.959)S(0.041)DEEVVEEPQSR	134.81	6.4852e-05	6353700.0	79.078	159.86	182.53	224.49	149.63	182.9	119.03	219.19	153.55	160.51	True	False	75.60182580532364	186.27414784460206	144.2194474200382	204.80931024320992	169.30896770403288	218.2428364570995	145.72550748673177	211.48096346192528	146.41149401512945	131.44008362629936	0.5751809015906374	1.4171791641140676	1.0972257734563846	1.558195221676125	1.2881075774829809	1.6603978819550302	1.1086839224862917	1.608953354466756	1.1139029280550041	1.0	7.038261493063428	-6.257896712656957	24.829016429541397	1.3399844202084983	0.5751805844462644	0.49002518226151837	0.22592238097397188	240.75896043002402	1687294.1619200418	0.05095083008592744	0.36489685326546945	5.522087543113532e-07	6.257896712656957	-0.7648038357622339	
VPS(ph)VESLFR	ddPTM_K562_Methotrexat_30min_R1	1	VPSVESLFR	9	0	E7EVX2;Q13439-5;Q86W71;Q13439-3;Q13439-4;Q13439	E7EVX2	GOLGA4	Golgin subfamily A member 4	1	VPS(0.996)VES(0.004)LFR	147.3	2.7691e-07	79047000.0	1045.3	804.75	885.91	1256.2	1055.2	613.39	765.13	1203.6	971.42	1031.4	True	False	999.349863606879	937.7212590888494	699.9695976764701	1146.0708963763216	1193.977295470798	731.918936328159	936.7298793860632	1161.2687057930254	926.2588962303939	844.6034655296563	1.1832178109524807	1.1102503095944536	0.8287552990769634	1.3569336891811272	1.4136542699621142	0.8665829187299958	1.1090765283547988	1.3749277065359735	1.096679014511894	1.0	9.72213035651161	-7.273664373468051	24.985660065841838	1.184075143880255	1.0476920359855912	0.0974892962157432	0.1836227939463939	1831.1664854979617	3742565.9627293157	0.05334214378087101	0.07979228172333075	5.325196360692096e-08	7.273664373468051	-0.1363831078946638	
VPSAPGQES(ph)PIPDPK	ddPTM_K562_Methotrexat_30min_R1	1	VPSAPGQESPIPDPK	15	0	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	VPSAPGQES(1)PIPDPK	152.59	2.3865e-09	97066000.0	6959.5	4906.5	8784.3	6745.8	5166.0	4088.8	4316.2	6382.1	6262.3	8058.2	True	False	6653.56871307001	5717.215728759787	6940.595474562214	6154.406187530159	5845.419549281787	4878.902732125687	5284.217721702355	6157.6379255912825	5971.167039862881	6598.781894445492	1.0083025654584272	0.8664047122958011	1.0517994965713964	0.9326579186850552	0.8858331193219394	0.7393641448026175	0.8007868431218089	0.9331476663555828	0.9048892864437748	1.0	12.687984018673678	-7.713369827317257	3.618338574530843	0.8622812216547268	0.9675632452841081	0.22028328350494186	0.0801653494080892	0.3275771119508491	8.80308060439779	0.02534855685515202	0.03229303701684812	1.9347736885529732e-08	7.713369827317257	0.10528202362938133	
VPSPLEGSEGDGDT(ph)D	ddPTM_K562_Methotrexat_30min_R1	1	VPSPLEGSEGDGDTD	15	0	F5H168;F5H1S9;Q9Y606-2;Q9Y606	F5H168	PUS1	tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial	1	VPSPLEGSEGDGDT(1)D	161.48	5.489299999999999e-06	13680000.0	1094.7	1059.3	1173.0	1153.6	897.34	675.94	974.66	1033.1	1141.4	1245.1	True	False	1046.5782987567688	1234.3313199786487	926.8033299934524	1052.465679079545	1015.3559385119091	806.5558385719617	1193.2523156096606	996.7652874333459	1088.336563131675	1019.600324734318	1.0264593619362379	1.2106031059771232	0.9089868917361849	1.032233565984584	0.9958372058938734	0.7910509824348376	1.1703137853752568	0.9776039328872101	1.0674148847640548	1.0	9.993788022621418	-6.7637343891206685	24.99999451883391	0.9927629768955334	1.1185312212523124	0.19589522206831045	0.10178772760379634	87.05540744880456	948360.2231234033	0.02562020311358074	0.05774764921899529	1.7229219775243437e-07	6.7637343891206685	0.12576824435677902	
VPT(ph)MPGSLPT(ph)GSK	ddPTM_K562_Methotrexat_30min_R1	1	VPTMPGSLPTGSK	13	0	C9JDV5	C9JDV5	C12orf77	Putative uncharacterized protein C12orf77	2	VPT(0.986)MPGS(0.035)LPT(0.898)GS(0.081)K	55.567	0.034054	0.0	1542.6	1267.6	2115.9	1427.1	1062.8	1336.0	1256.2	1151.6	1303.2	1360.3	True	False	1474.7891510570869	1477.0493544840328	1671.8015054843515	1301.988358715688	1202.5768286830598	1594.1630918900212	1537.9348273950473	1111.097575266906	1242.6145164475208	1113.9364884234935	1.3239436596105156	1.325972683213239	1.5008050484551236	1.1688174076767486	1.079573962412359	1.4311077053828911	1.380630622461807	0.9974514586907864	1.1155164853304516	1.0	10.121451263795583	-9.264360655147344	24.98016351770839	1.0423629634208806	1.3130319282053164	0.5396547867063572	0.11769465380167918	220.9757559945351	1889565.545860245	0.06508230758392246	0.033429062352769254	5.440506642140225e-10	9.264360655147344	0.2706689647844358	
VPVAS(ph)PSAHNISSSGGAPDR	ddPTM_K562_Methotrexat_30min_R1	4	VPVASPSAHNISSSGGAPDR	20	0	Q7KZI7-10;Q7KZI7-13;Q7KZI7-7;Q7KZI7-2;Q7KZI7-15;Q7KZI7-5;Q7KZI7-4;Q7KZI7-16;Q7KZI7-9;Q7KZI7;Q7KZI7-11;E9PC69;E7ETY4;Q7KZI7-8;Q7KZI7-14;Q7KZI7-6;Q7KZI7-3;Q7KZI7-12	Q7KZI7-10	MARK2	Serine/threonine-protein kinase MARK2	1	VPVAS(0.994)PS(0.006)AHNISSSGGAPDR;VPVAS(0.992)PS(0.008)AHNISSSGGAPDR;VPVAS(0.984)PS(0.016)AHNISSSGGAPDR;VPVAS(0.5)PS(0.5)AHNISSSGGAPDR	153.68	1.1567e-15	98644000.0	6206.13	5015.46	6873.18	5826.030000000001	5710.66	4981.98	4286.0599999999995	6015.66	6151.0599999999995	6788.099999999999	True	False	5933.315956210241	5844.179516756462	5430.593445562143	5315.270995395108	6461.711886043655	5944.677126148389	5247.318059468887	5804.085828091452	5865.09856318269	5558.709311966124	1.0673909397344647	1.051355483578861	0.9769522277180084	0.9562059638472242	1.1624482453388334	1.069434790078229	0.9439813749880911	1.0441427141363753	1.055118775604439	1.0	12.44053422419578	-6.534721227764427	24.8887955715737	1.0276457696799757	1.0633821145344744	0.04886516937485208	0.06033118277882111	664.7033560771654	1396974.9176271157	0.01615682493081147	0.04281890283688987	2.919300302212625e-07	6.534721227764427	0.035736344854498725	
VQAYEEPSVAS(ph)SPNGK	ddPTM_K562_Methotrexat_30min_R1	3	VQAYEEPSVASSPNGK	16	0	Q99575	Q99575	POP1	Ribonucleases P/MRP protein subunit POP1	1	VQAYEEPSVAS(0.5)S(0.5)PNGK;VQAYEEPSVAS(0.997)S(0.003)PNGK;VQAYEEPSVAS(0.5)S(0.5)PNGK	297.55	1.2867999999999994e-194	172559000.0	17605.1	12577.4	23714.1	15756.3	13560.599999999999	12004.3	10971.2	18406.2	18778.9	21918.9	True	False	16831.20088375153	14655.601570753772	18736.834482350987	14374.969642233908	15344.056589235499	14323.9610808199	13431.770879092936	17758.843513266536	17905.873037842503	17949.17481151638	0.9377144665699314	0.8165055900703905	1.0438827789637013	0.8008707805893548	0.8548613933711644	0.7980289473602706	0.7483224727676601	0.9893960975783842	0.9975875340159875	1.0	14.131629899213465	-9.383733492330757	9.237009855481704	0.9968540477907708	0.8583241708187203	0.3957367785276271	0.07845502508033729	0.37086887946137814	26.339178107359462	0.04393333929549693	0.02102881974820478	4.1330104909771e-10	9.383733492330757	-0.13852987697205055	
VQAYEEPSVAS(ph)SPNGKESDLR	ddPTM_K562_Methotrexat_30min_R1	2	VQAYEEPSVASSPNGKESDLR	21	1	Q99575	Q99575	POP1	Ribonucleases P/MRP protein subunit POP1	1	VQAYEEPS(0.019)VAS(0.491)S(0.491)PNGKESDLR;VQAYEEPS(0.004)VAS(0.498)S(0.498)PNGKES(0.001)DLR	104.7	6.0417e-05	252540000.0	3876.1	2498.5	4265.799999999999	3578.5	2510.3	2589.0	2265.7	3433.3	3776.2	5270.4	True	False	3705.711285111094	2911.334657761403	3370.4668756061956	3264.7784609796745	2840.4484503604476	3089.287608460529	2773.8408998797613	3312.5488929870353	3600.6452862255396	4315.8794887798185	0.858622511296943	0.6745634731762384	0.7809455487273327	0.756457280484143	0.6581389628104506	0.7157956139627822	0.6427058278830624	0.7675258082619809	0.8342784583272761	1.0	12.075438866038748	-10.04974354584968	1.9700209763318244	0.9985729820118542	0.7246597452757186	0.6527601009904226	0.06065364804916944	0.22550751419077503	1.9752426959917002	0.05693580454610335	0.01595314300092377	8.917773839200682e-11	10.04974354584968	-0.27391323673613555	
VQAYEEPSVASS(ph)PNGK	ddPTM_K562_Methotrexat_30min_R1	1	VQAYEEPSVASSPNGK	16	0	Q99575	Q99575	POP1	Ribonucleases P/MRP protein subunit POP1	1	VQAYEEPSVAS(0.091)S(0.909)PNGK	203.52	8.1116e-16	11807000.0	3294.6	2475.6	4764.1	3498.1	2707.4	2462.2	2074.6	3170.0	3488.2	4727.9	True	False	3149.7733288426516	2884.65082199485	3764.1805152786046	3191.4270041506197	3063.4705551152747	2937.9853030326412	2539.881860303902	3058.509303226895	3326.0343433642106	3871.631495712298	0.8135519437557318	0.7450737047649044	0.972246588924413	0.8243106317543438	0.7912608827849359	0.758849416915417	0.65602365904832	0.7899794457747571	0.8590782327935089	1.0	11.918725927200088	-5.811101399434539	19.06077842267674	0.8100518997299474	14.769538642851716	0.0	0.09814217008669716	43373.39212666332	4465304.620800529	0.023807039384061448	538483.7656576207	1.5448936943700408e-06	5.811101399434539	13.959486743121769	
VQDGMGLYT(ph)ARR	ddPTM_K562_Methotrexat_30min_R1	1	VQDGMGLYTARR	12	1	Q9NQX1-3;Q9NQX1-4;Q9NQX1-2;Q9NQX1	Q9NQX1-3	PRDM5	PR domain zinc finger protein 5	1	VQDGMGLY(0.002)T(0.998)ARR	79.492	0.030643	4744000.0	224.33	169.52	391.11	241.95	173.84	189.49	221.57	240.86	266.44	208.48	True	False	214.46872180515763	197.53029865267695	309.02135583438957	220.73861915160867	196.7030070551967	226.10626069029954	271.26271270969636	232.38881727925244	254.05326255546143	170.72225178749548	1.2562435157668554	1.1570272567547344	1.8100824737190104	1.2929692341826096	1.152181423309953	1.3244100187463708	1.5889124579222833	1.3612098882605865	1.4881086671214439	1.0	7.415507299993165														
VQDTS(ph)NTGLGEDIIHQLSK	ddPTM_K562_Methotrexat_30min_R1	4	VQDTSNTGLGEDIIHQLSK	19	0	Q8IWA0	Q8IWA0	WDR75	WD repeat-containing protein 75	1	VQDT(0.077)S(0.792)NT(0.132)GLGEDIIHQLSK;VQDT(0.149)S(0.844)NT(0.008)GLGEDIIHQLSK;VQDT(0.357)S(0.499)NT(0.143)GLGEDIIHQLSK;VQDT(0.119)S(0.574)NT(0.307)GLGEDIIHQLSK	167.51	2.2656e-12	201765300.0	18462.5	12705.6	21758.600000000002	18965.6	13614.8	12254.400000000001	11772.2	19434.4	18689.5	23256.100000000002	True	False	17650.91060637331	14804.98444172635	17191.767208862344	17302.91529399359	15405.384839249264	14622.3893662104	14412.415519073376	18750.88113647722	17820.62922432928	19044.19493378345	0.926839421028057	0.7774014335183604	0.9027300586156577	0.9085663822574659	0.8089281218142166	0.7678134684638737	0.7567878594598122	0.9845982569320426	0.9357512505144745	1.0	14.217063680861703	-9.27947261397778	24.743311285126346	0.9701310897554779	0.8351015262573458	0.5301537481011839	0.059451691376814886	638.8197829252766	876515.922717015	0.03399473185216481	0.016384550222961744	5.254451479252612e-10	9.27947261397778	-0.1350295634981321	
VQDTSNT(ph)GLGEDIIHQLSK	ddPTM_K562_Methotrexat_30min_R1	1	VQDTSNTGLGEDIIHQLSK	19	0	Q8IWA0	Q8IWA0	WDR75	WD repeat-containing protein 75	1	VQDT(0.119)S(0.392)NT(0.489)GLGEDIIHQLSK	114.64	0.00072072	81974000.0	2733.2	1808.9	3004.7	2862.6	2170.0	1686.6	1735.0	2414.2	2754.0	3328.2	True	False	2613.0518006412735	2107.7899789572157	2374.054531655008	2611.6403024732176	2455.3930356061724	2012.5115799264302	2124.117915563133	2329.291217618413	2625.967141111471	2725.43072908261	0.9587665438559271	0.7733786650547914	0.871074985073689	0.95824864473892	0.9009192599925908	0.7384196407750377	0.7793696214315888	0.8546506769601373	0.9635053692945559	1.0	11.412268537158901	-9.828968967303922	3.829369867290423	0.9964745807398409	0.8504284582147348	0.3460191936949083	0.07068500110200533	0.2547420506455286	6.853451870783361	0.07064147603749381	0.01909510276111818	1.482624022888271e-10	9.828968967303922	-0.14604612252510607	
VQEHEDS(ph)GDS(ph)EVENEAK	ddPTM_K562_Methotrexat_30min_R1	3	VQEHEDSGDSEVENEAK	17	0	Q9Y5J1	Q9Y5J1	UTP18	U3 small nucleolar RNA-associated protein 18 homolog	2	VQEHEDS(1)GDS(1)EVENEAK;VQEHEDS(1)GDS(1)EVENEAK;VQEHEDS(1)GDS(1)EVENEAK	151.16	2.3077e-10	107663000.0	10413.600000000002	7391.9	15367.399999999998	10627.5	7334.83	6987.52	7258.3	9628.0	10423.8	14206.699999999999	True	False	9955.83061289257	8613.285834183118	12141.99274794661	9695.803575258204	8299.48870938028	8337.759347188152	8886.158539787826	9289.377782797646	9939.199813187275	11633.728964262335	0.855772954955019	0.740371884255021	1.043688810805685	0.833421820728569	0.7133988366821584	0.7166884644468617	0.7638271930767192	0.7984866942777932	0.8543434219345761	1.0	13.50602597816356	-5.830974033519526	18.696049219290412	0.8193628732533318	53.51411161602924	0.0	0.10765835079459003	3271.8459355719633	361903.6960752444	0.02644106315749672	44.4798471838739	1.47579476845282e-06	5.830974033519526	52.69474874277591	
VQEHEDS(ph)GDSEVENEAK	ddPTM_K562_Methotrexat_30min_R1	1	VQEHEDSGDSEVENEAK	17	0	Q9Y5J1	Q9Y5J1	UTP18	U3 small nucleolar RNA-associated protein 18 homolog	1	VQEHEDS(0.901)GDS(0.099)EVENEAK	210.47	2.0455000000000002e-22	15766000.0	2175.5	1665.8	5155.8	2519.2	2092.7	1825.1	1550.2	2448.7	1696.3	2788.3	True	False	2079.8676248701477	1941.045136241323	4073.668038175823	2298.3456473103242	2367.926730697252	2177.774744766826	1897.8718113579062	2362.5778330636276	1617.4393832488718	2283.311850820575	0.9108995007066978	0.8501007584854219	1.7841049774746411	1.0065842063949113	1.0370579602809262	0.9537789347452382	0.8311925550930989	1.0347153553355255	0.7083742777700723	1.0	11.156912198498583	-7.939888362469145	2.140730883338365	0.904283196290264	1.1654661908027988	0.16234254389819935	0.2526722858110647	0.5917240113304982	5.505464223052752	0.09239755194463975	0.10532831458260863	1.1484487979643898e-08	7.939888362469145	0.2611829945125348	
VQEHEDSGDS(ph)EVENEAK	ddPTM_K562_Methotrexat_30min_R1	1	VQEHEDSGDSEVENEAK	17	0	Q9Y5J1	Q9Y5J1	UTP18	U3 small nucleolar RNA-associated protein 18 homolog	1	VQEHEDS(0.18)GDS(0.82)EVENEAK	255.22	1.5163999999999996e-80	20745000.0	1654.7	1520.6	4087.5	2181.8	1551.1	1331.5	1226.9	1700.2	1255.7	2220.1	True	False	1581.9613692818366	1771.8533042193287	3229.589608992526	1990.5249814630301	1755.0968375708446	1588.7935305775175	1502.0635565443258	1640.403002317466	1197.3227810797666	1818.0183767911483	0.8701569739212655	0.9746069274319976	1.776433973507374	1.0948871622388991	0.9653900422440383	0.8739150004532854	0.826209226331094	0.9023027617646098	0.6585867317760967	1.0	10.828151067236716	-7.8119959393181695	2.9244021380100067	0.8515567959401963	1.2139133722594493	0.29834810240859444	0.23728222026929036	0.3283634342612206	5.727430493916445	0.08055521280591778	0.09765584566734824	1.54171486801709e-08	7.8119959393181695	0.362356576319253	
VQEKPDS(ph)PGGSTQIQR	ddPTM_K562_Methotrexat_30min_R1	2	VQEKPDSPGGSTQIQR	16	1	M0R300;M0R0P8;Q13459-2;Q13459	M0R300	MYO9B	Unconventional myosin-IXb	1	VQEKPDS(0.98)PGGS(0.015)T(0.005)QIQR;VQEKPDS(0.931)PGGS(0.069)T(0.001)QIQR	190.18	1.6528e-08	37714000.0	3825.8	2840.7	6169.3	4225.2	2854.3	2394.2	2378.5	3412.1000000000004	3924.3	5234.9	True	False	3657.622412883572	3310.077391355942	4874.448238472811	3854.7832760461956	3229.6904799680624	2856.845265421475	2911.9391712777588	3292.094509003311	3741.8601495511084	4286.808882781847	0.8532273103134058	0.7721541785198334	1.137080838395022	0.899219764969952	0.7534020219423015	0.6664270191507993	0.6792789813825589	0.7679592440489126	0.8728777633592323	1.0	12.065688384110182	-7.717959616588894	5.966268979900152	0.7665938092359443	0.9227562304142685	0.17997484864555746	0.1254347346589208	0.27688283244133716	23.807586390045692	0.03810667025201948	0.04858643366043905	1.9144339327587555e-08	7.717959616588894	0.15616242117832413	
VQEKPDSPGGS(ph)TQIQR	ddPTM_K562_Methotrexat_30min_R1	1	VQEKPDSPGGSTQIQR	16	1	M0R300;M0R0P8;Q13459-2;Q13459	M0R300	MYO9B	Unconventional myosin-IXb	1	VQEKPDS(0.019)PGGS(0.677)T(0.305)QIQR	166.9	1.7268e-07	23268000.0	3346.8	2060.0	4500.0	3982.9	2371.4	2168.9	1943.1	2769.5	3017.3	3812.3	True	False	3199.678679345169	2400.3799859869887	3555.511496138562	3633.7253408511756	2683.2806657310934	2588.0092290421153	2378.8896378851414	2672.095115232456	2877.026381581572	3121.8555280576984	1.0249284922341968	0.7688952818006973	1.1389096850201355	1.1639633250780004	0.8595146833718248	0.8289971159082681	0.7620114436766385	0.8559317019051594	0.9215757602247373	1.0	11.608188059076747	-7.886016108547682	14.715286052200119	0.8562263163765084	1.0141217109974614	0.29015110100187014	0.1152549053344767	0.9443164938462315	117.76833662844561	0.0373943186497612	0.04240353782437167	1.300121353945483e-08	7.886016108547682	0.15789539462095303	
VQGGVPAGS(ph)DEYEDECPHLIALSSLNR	ddPTM_K562_Methotrexat_30min_R1	4	VQGGVPAGSDEYEDECPHLIALSSLNR	27	0	Q9BVS4-2;Q9BVS4;H0Y919;H0Y8R4	Q9BVS4-2	RIOK2	Serine/threonine-protein kinase RIO2	1	VQGGVPAGS(0.79)DEY(0.21)EDECPHLIALSSLNR;VQGGVPAGS(0.793)DEY(0.207)EDECPHLIALSSLNR;VQGGVPAGS(0.999)DEY(0.001)EDECPHLIALSSLNR;VQGGVPAGS(0.941)DEY(0.059)EDECPHLIALSSLNR	116.13	1.7264e-12	465558000.0	8019.0	7235.3	9041.1	8991.7	7258.6	6864.1	6596.7	9034.2	8892.5	10996.199999999999	True	False	7666.494361679487	8430.810345927996	7143.496663941862	8203.411621514864	8213.233128226244	8190.4901789238775	8076.1778983258255	8716.462065366699	8479.089615952715	9004.681624643403	0.8513898304520112	0.9362696758600687	0.7933091875666124	0.9110162872459947	0.9121069984027891	0.9095813178456748	0.8968865569020773	0.967992254330467	0.9416312502096372	1.0	13.13645955283495	-9.299093541779714	0.4272707920555854	1.0026879636029926	0.8645512067604211	0.5362022383176404	0.03751371150875803	0.8071193994426858	0.38784422400151586	0.04207428448032102	0.03317750778367818	5.022344026546511e-10	9.299093541779714	-0.13813675684257154	
VQIPVSRPDPEPVS(ph)DNEEDS(ph)YDEEIHDPR	ddPTM_K562_Methotrexat_30min_R1	4	VQIPVSRPDPEPVSDNEEDSYDEEIHDPR	29	1	G3V1L9;Q07157;A0A087X0K9;G5E9E7;Q07157-2;H0YKB1	G3V1L9	TJP1	Tight junction protein ZO-1	2	VQIPVS(0.007)RPDPEPVS(0.993)DNEEDS(0.547)Y(0.453)DEEIHDPR;VQIPVS(0.004)RPDPEPVS(0.718)DNEEDS(0.658)Y(0.62)DEEIHDPR;VQIPVS(0.002)RPDPEPVS(0.992)DNEEDS(0.541)Y(0.465)DEEIHDPR;VQIPVS(0.015)RPDPEPVS(0.947)DNEEDS(0.552)Y(0.486)DEEIHDPR	105.79	3.9508e-11	271127000.0	4555.7	4081.61	5217.620000000001	4630.21	4660.19	4018.5299999999997	3852.8299999999995	4043.0499999999997	4275.26	4592.13	True	False	4355.436882841158	4756.026676992405	4122.51286499611	4224.286678164787	5273.086668479962	4795.054049141324	4716.925203815041	3900.853639877446	4076.5040957546234	3760.450758350498	1.1582220224980815	1.2647490906325844	1.0962815709902896	1.1233458299604882	1.4022485620295622	1.2751274666988723	1.254351009208294	1.0373367158751297	1.0840466629438756	1.0	11.876689890144734	-9.26529437585645	24.81380899185411	1.0455187496201384	1.2263357396199013	0.49992540422001175	0.08448087802049305	284.6830006138263	1832425.0708870054	0.04735175623811775	0.02411543677087154	5.428822273565168e-10	9.26529437585645	0.18081698999976292	
VQIPVSRPDPEPVSDNEEDS(ph)Y(ph)DEEIHDPR	ddPTM_K562_Methotrexat_30min_R1	1	VQIPVSRPDPEPVSDNEEDSYDEEIHDPR	29	1	G3V1L9;Q07157;A0A087X0K9;G5E9E7;Q07157-2;H0YKB1	G3V1L9	TJP1	Tight junction protein ZO-1	2	VQIPVS(0.003)RPDPEPVS(0.625)DNEEDS(0.704)Y(0.668)DEEIHDPR	48.626000000000005	0.018889	0.0	426.91	367.29	409.37	356.17	412.36	338.18	237.38	273.11	266.07	501.19	True	False	408.1435475676004	427.97842963745677	323.44883137205403	324.9451290895989	466.5925678168486	403.52849881389767	290.6185076636174	263.5045664997784	253.70046377470214	410.4196343696031	0.9944542448474749	1.042782542055581	0.7880929767623457	0.7917387519452098	1.136867071512127	0.9832095373158984	0.7081008882774382	0.6420369408118509	0.6181489444684617	1.0	8.680955940529834	-8.765182027949116	24.986695145796876	0.7122413830179356	0.9532234989527548	0.3538916956293743	0.13938958541620092	100.10665130264742	668321.5058059006	0.05774272755389198	0.04061952572931241	1.7171885027717733e-09	8.765182027949116	0.24098211593481922	
VQIPVSRPDPEPVSDNEEDS(ph)YDEEIHDPR	ddPTM_K562_Methotrexat_30min_R1	2	VQIPVSRPDPEPVSDNEEDSYDEEIHDPR	29	1	G3V1L9;Q07157;A0A087X0K9;G5E9E7;Q07157-2;H0YKB1	G3V1L9	TJP1	Tight junction protein ZO-1	1	VQIPVS(0.003)RPDPEPVS(0.146)DNEEDS(0.446)Y(0.405)DEEIHDPR;VQIPVSRPDPEPVS(0.021)DNEEDS(0.524)Y(0.455)DEEIHDPR	60.521	0.0011703	29106700.0	2366.2	2075.7799999999997	2829.4	2469.8	2238.3	2345.51	2069.12	2749.1	2461.8	2725.9	True	False	2262.184681207881	2418.767362772851	2235.5476060387673	2253.276468611875	2532.67568276373	2798.746612020182	2533.1728308069078	2652.4125947952853	2347.3514553334153	2232.2130954889394	1.0134268479024298	1.0835736819486086	1.0014938137208167	1.0094360942355827	1.1346030035761339	1.253799029168024	1.134825718891344	1.1882434522741236	1.0515803621424666	1.0	11.124259043518418	-7.787162452450344	9.088606672099443	1.1434594245786367	1.0292024529621717	0.3202982331043901	0.06907666609900345	0.27050946254451724	87.64698062282227	0.02078743396696655	0.023933035566741468	1.632441201753568e-08	7.787162452450344	-0.11425697161646498	
VQIS(ph)PDSGGLPER	ddPTM_K562_Methotrexat_30min_R1	4	VQISPDSGGLPER	13	0	M0QXW7;M0QYH3;A0A087WTP3;Q92945	M0QXW7	KHSRP	Far upstream element-binding protein 2	1	VQIS(0.956)PDS(0.044)GGLPER;VQIS(0.988)PDS(0.012)GGLPER;VQIS(0.5)PDS(0.5)GGLPER;VQIS(0.957)PDS(0.043)GGLPER	172.43	4.293e-05	416052000.0	8995.2	8202.9	10888.5	9406.2	8121.900000000001	7571.400000000001	7211.4	8922.5	8468.599999999999	8853.9	True	False	8599.781778548362	9558.289799540133	8603.152650156606	8581.573050067625	9190.072210087454	9034.46589366475	8828.740020917565	8608.690617678856	8074.896634428686	7250.372913954845	1.1861157875060881	1.3183169904465497	1.1865807114001068	1.1836043679285255	1.2675309696690573	1.2460691333925802	1.2176946104282202	1.1873445297013134	1.1137215602920059	1.0	12.823839484931367	-9.969649695439454	1.3426177762557263	1.0004092980185688	1.2327377941864337	0.7725021947818825	0.039440121355097196	0.19835765479703824	0.8067318457966062	0.0371491688256759	0.0113398626573933	1.0723839478677895e-10	9.969649695439454	0.23232849616786488	
VQISPDS(ph)GGLPER	ddPTM_K562_Methotrexat_30min_R1	1	VQISPDSGGLPER	13	0	M0QXW7;M0QYH3;A0A087WTP3;Q92945	M0QXW7	KHSRP	Far upstream element-binding protein 2	1	VQIS(0.231)PDS(0.769)GGLPER	156.72	1.4447000000000002e-07	249710000.0	2553.0	2258.8	3101.3	2751.6	2218.7	2355.3	2280.7	2330.7	2187.9	2730.4	True	False	2440.7731768758863	2632.028306964762	2450.379511772116	2510.371500134601	2510.4979392163204	2810.4283909644955	2792.205031714601	2248.7279599466656	2086.185006549669	2235.8981018830464	1.0916298801006614	1.1771682728958444	1.095926290070391	1.1227575612772318	1.1228141108496892	1.2569572775242246	1.2488069243240734	1.0057381228835134	0.9330411814351958	1.0	11.126638725411258	-9.411238329526082	5.7751569743675955	0.9674942766041843	1.1581428403967118	0.6855481548592218	0.056165343634831826	0.13821464812028136	6.080940233619593	0.034434608284929766	0.016033389570915407	3.87937417591895e-10	9.411238329526082	0.19064856379252748	
VQIY(ph)HNPTANSFR	ddPTM_K562_Methotrexat_30min_R1	3	VQIYHNPTANSFR	13	0	P50552;K7ENR7;K7ENL7	P50552	VASP	Vasodilator-stimulated phosphoprotein	1	VQIY(1)HNPTANSFR;VQIY(1)HNPTANSFR;VQIY(0.985)HNPT(0.015)ANSFR	179.6	4.1468e-06	81024000.0	5125.65	4406.639999999999	6091.7	5369.01	4648.15	4277.54	3986.5499999999997	5014.4	5260.75	5960.26	True	False	4900.332563280019	5134.762359927039	4813.135418006062	4898.317229225785	5259.4631974437	5104.114065930568	4880.635317745358	4838.040709811025	5016.178880756057	4880.799157899741	1.0040020916141699	1.0520331187191447	0.9861367498016871	1.0035891809433892	1.0775823850344421	1.0457537589247827	0.9999664316950807	0.9912394575754035	1.0277372041906703	1.0	12.25290167153739	-8.7826298346461	24.795020336625832	1.0040057177634167	1.028483334168268	0.1576747934697993	0.026522412400887492	445.80728809443247	521635.2082947994	0.011703073239209633	0.007899613280569708	1.6495677805336262e-09	8.7826298346461	0.024477616404851243	
VQMT(ph)SPSSTGSPMFK	ddPTM_K562_Methotrexat_30min_R1	1	VQMTSPSSTGSPMFK	15	0	P49790-2;P49790;P49790-3	P49790-2	NUP153	Nuclear pore complex protein Nup153	1	VQMT(0.498)S(0.391)PS(0.067)S(0.019)T(0.019)GS(0.006)PMFK	82.57799999999999	0.014671	26017000.0	5362.3	3655.6	6088.9	4598.3	3059.5	2984.0	3137.1	3656.8	3973.8	5234.7	True	False	5126.579712636727	4259.625765424291	4810.923099741797	4195.174178321317	3461.8778766991145	3560.6157681136397	3840.674531938384	3528.188271306027	3789.0589053553986	4286.645104719887	1.1959421849483212	0.9936968564843761	1.122304968620949	0.9786614183903739	0.807596101876349	0.8306299404616352	0.8959627956393079	0.8230651675412206	0.8839217646413946	1.0	12.065633264715322	-7.512860785812857	3.849332080740474	0.8641711613295132	1.0907043500172313	0.6874953752860203	0.06919980161721416	0.11856556942801409	3.907444617287145	0.01940728845477455	0.02764260800059764	3.0700059287929255e-08	7.512860785812857	0.2265331886877181	
VQPQWS(ph)PPAGTQPCR	ddPTM_K562_Methotrexat_30min_R1	4	VQPQWSPPAGTQPCR	15	0	B4DKY1;P49589-2;P49589;P49589-3;C9JLN0;E9PRS8;E9PLP0	B4DKY1	CARS	Cysteine--tRNA ligase, cytoplasmic	1	VQPQWS(0.996)PPAGT(0.004)QPCR;VQPQWS(0.858)PPAGT(0.142)QPCR;VQPQWS(0.999)PPAGT(0.001)QPCR;VQPQWS(0.987)PPAGT(0.013)QPCR	158.14	3.2193e-10	121740100.0	6330.21	6198.15	7414.509999999999	6926.88	5704.26	5610.42	5481.42	6541.2	6611.710000000001	7547.18	True	False	6051.941547979435	7222.288936963712	5858.305676274298	6319.611185074995	6454.470173864915	6694.554261977258	6710.76796814182	6311.142288412549	6304.3330452280825	6180.312568330538	0.9792290407755576	1.1685960632432284	0.9478979600956943	1.0225390892781472	1.0443598284881623	1.0832064216754704	1.085829866037758	1.021168786956248	1.0200670233950717	1.0	12.593464088710359	-9.497934398960675	22.502383089615357	1.0135615799752395	1.04887760837184	0.06852566889334255	0.05732767456513635	589.684907054377	531965.2860665242	0.03090641300257038	0.014701304565801487	3.1773539799979287e-10	9.497934398960675	0.03531602839660053	
VQQSSESST(ph)SSPSQHEATPGAR	ddPTM_K562_Methotrexat_30min_R1	1	VQQSSESSTSSPSQHEATPGAR	22	0	E9PBY7;E9PQ61;O75152;A0A1B0GTU1;A0A494C0C4	E9PBY7	ZC3H11A	Zinc finger CCCH domain-containing protein 11A	1	VQQSSESS(0.004)T(0.477)S(0.256)S(0.256)PS(0.007)QHEATPGAR	140.56	1.1778e-12	1914500.0	635.08	569.45	747.25	675.86	468.48	486.72	431.37	837.75	587.36	588.81	True	False	607.1626436233207	663.5419335049957	590.4124367754534	616.6084031403445	530.0933314842299	580.7717515604128	528.1157033063217	808.2858576587795	560.0537618021915	482.1708033144434	1.25922731001065	1.376155356035261	1.224488153818018	1.2788173794468198	1.0993891124065724	1.2044938174775126	1.0952876028080776	1.6763475766318083	1.1615256625917216	1.0	8.913400484454831	-10.006332320741656	24.99296897283143	0.9999999224637254	1.2737226009460372	0.23504234407744118	0.15565451474985958	345.5650815840211	1363912.546947892	0.15033034981479204	0.03881512944111475	9.855250764114414e-11	10.006332320741656	0.2737226784823118	
VQQSSESSTSS(ph)PSQHEATPGAR	ddPTM_K562_Methotrexat_30min_R1	1	VQQSSESSTSSPSQHEATPGAR	22	0	E9PBY7;E9PQ61;O75152;A0A1B0GTU1;A0A494C0C4	E9PBY7	ZC3H11A	Zinc finger CCCH domain-containing protein 11A	1	VQQSSES(0.001)S(0.007)T(0.007)S(0.075)S(0.909)PS(0.002)QHEATPGAR	114.85	9.057e-06	21785000.0	1072.9	1500.4	1571.2	1369.8	867.91	1257.1	944.0	1168.9	1202.3	1496.3	True	False	1025.7366006541865	1748.3155975606212	1241.4265917184243	1249.7117607516998	982.0553776649548	1500.016783544121	1155.7160301392482	1127.7891244611735	1146.4053354242283	1225.3055705565503	0.8371271830489461	1.4268404874438894	1.0131567353885054	1.0199184520021922	0.8014779343726415	1.2241981262378439	0.9432063788090888	0.9204145900919365	0.9356077071481161	1.0	10.258925862585716	-6.97532725061038	24.990335125800122	0.9791092006899308	1.1539875565561328	0.11564091467417892	0.16589121036343868	386.71151774312335	391684.70640410064	0.04080621768820464	0.0849394967788374	1.0584558544367869e-07	6.97532725061038	0.17487835586620204	
VQS(ph)LPSVPLSCAAYR	ddPTM_K562_Methotrexat_30min_R1	2	VQSLPSVPLSCAAYR	15	0	Q96AD5-2;Q96AD5	Q96AD5-2	PNPLA2	Patatin-like phospholipase domain-containing protein 2	1	VQS(0.672)LPS(0.328)VPLSCAAYR;VQS(0.9)LPS(0.1)VPLSCAAYR	153.48	5.636800000000001e-09	29735000.0	2229.0	1250.69	1967.16	2354.9	1773.87	1778.94	1823.62	2443.58	2778.3	3207.0	True	False	2131.015828929241	1457.3452644048868	1554.279998831985	2148.4495732181163	2007.1649972676119	2122.6949780590076	2232.613206443366	2357.6379063656723	2649.1374394153986	2626.1812235346233	0.8114504093746696	0.5549294356934821	0.5918403440338562	0.8180888485397365	0.764290361716216	0.808281987182147	0.8501367637677543	0.8977437981954978	1.0087412916043463	1.0	11.358750759641403	-8.650204003483609	0.5626083724683001	1.0124205165576419	0.6466772926979841	0.7022083084611204	0.07711990975235809	0.4828884695500317	0.32040403246963306	0.07198906890659773	0.06165229883831256	2.2376697789927095e-09	8.650204003483609	-0.36574322385965774	
VQS(ph)PEPPAPER	ddPTM_K562_Methotrexat_30min_R1	1	VQSPEPPAPER	11	0	A0A0G2JMS7;A0A0G2JNZ2;A0A0G2JPP5;A0A669KB89;Q14160-2;Q14160;Q14160-3;H0YCG0	A0A0G2JMS7	SCRIB	Protein scribble homolog	1	VQS(1)PEPPAPER	109.6	0.0027324000000000003	13970000.0	2005.6	1250.8	2178.9	1888.4	1411.6	1578.1	1721.7	1416.0	1486.8	2071.5	True	False	1917.436225437633	1457.4734400352065	1721.5786664302914	1722.8469039301433	1597.2501424247332	1883.045490502726	2107.8350520029067	1366.198477403559	1417.6789925216178	1696.3312767545906	1.1303430242152104	0.8591915152467358	1.0148835254184572	1.0156311609288264	0.9415909287958076	1.1100694282459707	1.2425845593294738	0.8053842407583032	0.8357323902167928	1.0	10.728202226178963	-9.309394961134357	24.999729302958457	0.8654186859329747	1.0340099095140782	0.31389089752289945	0.1099874880041778	503.50537150475236	262479.81419392605	0.06127016348632932	0.029433351323200668	4.904616319524332e-10	9.309394961134357	0.16859122358110357	
VQSGMGLILQGY(ph)ES(ph)GSEEEGEIHEK	ddPTM_K562_Methotrexat_30min_R1	1	VQSGMGLILQGYESGSEEEGEIHEK	25	0	Q13523	Q13523	PRPF4B	Serine/threonine-protein kinase PRP4 homolog	2	VQSGMGLILQGY(0.703)ES(0.648)GS(0.648)EEEGEIHEK	69.649	0.00070794	32380000.0	2263.4	1499.2	3152.0	2678.8	1498.5	1515.9	1635.3	1998.0	2101.0	2762.1	True	False	2163.9036461186374	1746.9173179571335	2490.4382746286096	2443.9537631053095	1695.5790156017742	1808.8262208054518	2002.057652634231	1927.7292075228181	2003.3249685821363	2261.8569247037676	0.9566934240997763	0.7723376748005071	1.1010591551694981	1.080507673324824	0.749640261098231	0.7997085054539209	0.8851389452480235	0.8522772534674316	0.8856992441484817	1.0	11.143291958221191	-7.763081179545353	24.999918159790898	0.8527258785400065	0.9717993179031618	0.22882783667862927	0.102861074411966	68.89914212320336	1049142.2911193522	0.032601737843943566	0.03893827696079325	1.7255153236687532e-08	7.763081179545353	0.11907343936315529	
VRAS(ph)LSDLSSLDDVEGMSVR	ddPTM_K562_Methotrexat_30min_R1	1	VRASLSDLSSLDDVEGMSVR	20	1	A0A087WTM5;H7BYJ1;Q969K3;Q969K3-2	A0A087WTM5	RNF34	E3 ubiquitin-protein ligase RNF34	1	VRAS(0.866)LS(0.134)DLSSLDDVEGMSVR	59.792	0.032089	30750000.0	1160.9	607.54	1197.6	1198.5	898.04	748.88	889.59	1224.1	1262.9	1645.6	True	False	1109.8682260224105	707.9256585856965	946.2401261723429	1093.4293657912917	1016.1480007814591	893.5904612684122	1089.1032025970069	1181.0477091735152	1204.1880546512994	1347.5658938099702	0.8236096142834859	0.5253365804503851	0.702184680184388	0.8114106856027954	0.7540618276621012	0.6631144832123688	0.8082003318722973	0.8764303954252963	0.8936023538312483	1.0	10.396140104837327	-9.483494326272108	0.7239413019136386	1.0003918715925315	0.6976083746893119	0.5850312288403476	0.08127811100194392	0.45934881498893165	0.49046305879547786	0.07833927177473918	0.03479329773038537	3.2847753558481164e-10	9.483494326272108	-0.3027834969032196	
VRCS(ph)RYLY(ph)T(ph)LVIT(ph)DKEK	ddPTM_K562_Methotrexat_30min_R1	1	VRCSRYLYTLVITDKEK	17	3	J3KT73;J3QL01;P63173	J3KT73	RPL38	60S ribosomal protein L38	4	VRCS(0.847)RY(0.338)LY(0.817)T(0.998)LVIT(1)DKEK	59.618	0.033228	88516000.0	1712.5	1289.9	2478.7	1768.9	1489.5	1431.5	1601.3	1528.1	1658.5	1755.3	True	False	1637.2205504896012	1503.0340504488438	1958.4547434397018	1613.8232833944226	1685.3953578504106	1708.117115299825	1960.432287141926	1474.3558568646738	1581.3966969983205	1437.3981607952355	1.139016728380823	1.0456629843030378	1.3624998256267375	1.122739215487503	1.1725320122282412	1.1883395720743202	1.363875605668873	1.0257115231377447	1.100179991967861	1.0	10.489244029852818	-9.354172818421915	24.99995928520072	1.0472077134876423	1.1952417383163565	0.35685643397162126	0.09657369940202114	72.07043237011021	19425.632370886917	0.052428859694280475	0.025186009919236994	4.424122885969147e-10	9.354172818421915	0.1480340248287142	
VREEEIEVDSR	ddPTM_K562_Methotrexat_30min_R1	4	VREEEIEVDSR	11	1	A0A0A0MRM9;Q14978;Q14978-3;Q14978-2	A0A0A0MRM9	NOLC1	Nucleolar and coiled-body phosphoprotein 1	0	;;;	160.72	6.300899999999999e-07	107282000.0	12737.4	10314.8	15206.7	13236.8	10756.4	10583.3	10454.099999999999	12957.900000000001	12076.0	15183.9	False	True	12177.479147332117	12019.145378377956	12015.021481851174	12076.350295457805	12171.055137416695	12628.37294191592	12798.698040973215	12502.16331239236	11514.589395810508	12433.94857500073	0.9793734527594667	0.9666394633916403	0.9663077991176644	0.9712401674025016	0.978856801924322	1.0156365747970113	1.0293349665854206	1.0054861685312726	0.9260605612412895	1.0	13.601996896773343	-8.051311963855449	6.753433319510408	0.9978177471024511	0.9707902018673567	0.1659553366002634	0.025759329631160583	0.41537139543083684	44.6231655690601	0.008822677878685483	0.008935355480497165	8.885626133098654e-09	8.051311963855449	-0.02702754523509443	
VRGGAPDPS(ph)PGATATPGAPAQPS(ph)SPDAR	ddPTM_K562_Methotrexat_30min_R1	1	VRGGAPDPSPGATATPGAPAQPSSPDAR	28	1	O95365	O95365	ZBTB7A	Zinc finger and BTB domain-containing protein 7A	2	VRGGAPDPS(0.996)PGAT(0.004)AT(0.003)PGAPAQPS(0.523)S(0.474)PDAR	77.352	0.00021935	0.0	999.83	762.98	1222.8	1152.8	956.36	1081.9	767.81	1139.8	1293.8	1145.1	True	False	955.8786703626384	889.0494765574533	966.1509905507191	1051.7358138374643	1082.138103010285	1290.9618631106405	940.0109376072202	1099.71258795521	1233.6515203957963	937.7112937541297	1.0193741684988944	0.9481057575814634	1.030328841068695	1.1215987488290102	1.154020550054316	1.3767157031267814	1.0024524007212112	1.1727624432809247	1.3155984455054062	1.0	9.872999998249107	-7.3162151571211345	2.109990125282171	1.1797636907442477	0.9836506257295523	0.3216866566038413	0.11162362657417732	0.3636785633752839	3.1612542749424315	0.03372580192056429	0.06214388808902638	4.828195454880212e-08	7.3162151571211345	-0.1961130650146954	
VRGGAPDPSPGATATPGAPAQPS(ph)SPDAR	ddPTM_K562_Methotrexat_30min_R1	4	VRGGAPDPSPGATATPGAPAQPSSPDAR	28	1	O95365	O95365	ZBTB7A	Zinc finger and BTB domain-containing protein 7A	1	VRGGAPDPSPGATATPGAPAQPS(0.633)S(0.367)PDAR;VRGGAPDPSPGATATPGAPAQPS(0.617)S(0.383)PDAR;VRGGAPDPSPGATATPGAPAQPS(0.598)S(0.402)PDAR;VRGGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDAR	178.17	1.6430999999999998e-35	554244000.0	8394.8	7645.7	11090.999999999998	9445.7	8216.8	8168.400000000001	7595.099999999999	10030.099999999999	9591.300000000001	10740.0	True	False	8025.7746436497	8909.021970320742	8763.150667482847	8617.610146395333	9297.453223487926	9746.827694456922	9298.494513252763	9677.335697885199	9145.40255647875	8794.881927272161	0.9125505845351344	1.0129780074357386	0.9963920766587078	0.9798437565913052	1.0571436092458883	1.1082386068462	1.0572620064879943	1.1003371935985435	1.03985506935797	1.0	13.10244849407253	-7.788727929492474	4.854176812029951	1.0686066722821232	0.9790631714258735	0.5459810832350902	0.03760656198332211	0.13805511058159528	7.96259063630072	0.011210571281198779	0.013324077036950694	1.6265674250034488e-08	7.788727929492474	-0.08954350085624974	
VRGGAPDPSPGATATPGAPAQPS(ph)SPDARR	ddPTM_K562_Methotrexat_30min_R1	4	VRGGAPDPSPGATATPGAPAQPSSPDARR	29	2	O95365	O95365	ZBTB7A	Zinc finger and BTB domain-containing protein 7A	1	VRGGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDARR;VRGGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDARR;VRGGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDARR;VRGGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDARR	170.68	5.0169e-35	348885000.0	13128.699999999999	12015.0	16320.499999999998	16016.8	12687.2	12187.7	12456.300000000001	14792.5	13892.7	15972.100000000002	True	False	12551.57806786151	14000.27452991926	12895.050082828764	14612.632011686244	14355.789180342217	14542.800535200615	15249.942358287637	14272.239390531193	13246.831409338913	13079.397917186576	0.9596449429349113	1.0704066516336073	0.9859054800897543	1.1172251279613543	1.097587921954606	1.1118860843044693	1.1659514034853948	1.0912000293054163	1.0128013149544388	1.0	13.675008510455672	-7.262590333977763	24.994135529860515	1.0940242126994908	1.0118277861202805	0.31038354339116214	0.05321253455819896	117.52851336908242	2552254.9715106986	0.014578159156082833	0.023071765779963095	5.462729123854961e-08	7.262590333977763	-0.08219642657921034	
VRGGAPDPSPGATATPGAPAQPSS(ph)PDAR	ddPTM_K562_Methotrexat_30min_R1	2	VRGGAPDPSPGATATPGAPAQPSSPDAR	28	1	O95365	O95365	ZBTB7A	Zinc finger and BTB domain-containing protein 7A	1	VRGGAPDPSPGATATPGAPAQPS(0.235)S(0.765)PDAR;VRGGAPDPSPGATATPGAPAQPS(0.29)S(0.71)PDAR	116.36	1.1236e-12	38353000.0	2720.5	2754.3	3685.3999999999996	3348.0	2596.7	2550.0	2519.7	3082.2	2942.1	2788.7	True	False	2600.9100774347235	3209.4012599048388	2911.8849039709003	3054.486038105335	2938.2115647735236	3042.751410418829	3084.80686561638	2973.7972789924074	2805.3224131677775	2283.639406944497	1.1389320352089798	1.4053888061946735	1.2751071360548092	1.33755181698858	1.2866355151511606	1.3324132527954673	1.3508292317235158	1.3022184106427468	1.2284436871411721	1.0	11.157119147760676	-10.188002769233625	2.235716020033527	1.000186075276043	1.3094465667608752	0.6587765716089247	0.06564489494952196	0.4001837591977861	3.514387369463077	0.057974991097516	0.01588486137968506	6.486302976113752e-11	10.188002769233625	0.30926049148483226	
VRGPVS(ph)GSPDSMNASR	ddPTM_K562_Methotrexat_30min_R1	2	VRGPVSGSPDSMNASR	16	1	A0A499FJS7;O14920-4;O14920-2;O14920	A0A499FJS7	IKBKB	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	VRGPVS(0.768)GS(0.23)PDS(0.002)MNASR;VRGPVS(0.727)GS(0.249)PDS(0.024)MNASR	145.33	5.513e-09	28997900.0	3194.7799999999997	3020.17	4448.3	4262.09	3317.33	2989.77	2945.24	3548.91	3732.85	3832.1000000000004	True	False	3054.341296521558	3519.2017583875345	3514.6626196162592	3888.4391870216177	3753.6170409250767	3567.500738952116	3605.78504301623	3424.092823758661	3559.310618263603	3138.0695561917746	0.9733185456310198	1.1214543512726611	1.120007876396947	1.2391182277490558	1.1961548250320824	1.1368456546519257	1.1490456085976801	1.0911462484961587	1.1342357314039362	1.0	11.615661615062681	-12.015337844483842	14.619198438449452	0.9999999813285981	1.1334633529251825	0.25568239376203195	0.06565849455640961	0.0	0.0	0.06637746845957868	0.016098900801173394	9.652996650992747e-13	12.015337844483842	0.1334633715965844	
VRGPVSGSPDS(ph)MNASR	ddPTM_K562_Methotrexat_30min_R1	2	VRGPVSGSPDSMNASR	16	1	A0A499FJS7;O14920-4;O14920-2;O14920	A0A499FJS7	IKBKB	Inhibitor of nuclear factor kappa-B kinase subunit beta	1	VRGPVS(0.206)GS(0.357)PDS(0.436)MNASR;VRGPVS(0.035)GS(0.067)PDS(0.898)MNASR	110.54	0.0015667	42683000.0	7434.7	6595.5	8498.9	8361.3	6056.5	6029.7	6741.299999999999	7209.799999999999	6992.1	8206.0	True	False	7107.879490058422	7685.294270668535	6715.097034340447	7628.277810755723	6853.03590790266	7194.854188000947	8253.208129213677	6956.227247446453	6667.038797155241	6719.81388223421	1.0577494577417057	1.1436766561328215	0.9992980686702896	1.1351918288873004	1.0198252552828377	1.0706924795971873	1.2281899876771056	1.0351815346906066	0.9921463472048689	1.0	12.71420556009229	-9.51310390392617	24.364774827806055	1.0019367039883622	1.092711677623303	0.29184264397320103	0.06213026757500227	434.8939662730518	1084037.5548907227	0.037180907912471306	0.015821754110027567	3.0682878199769315e-10	9.51310390392617	0.0907749736349408	
VRHFSQSEET(ph)GNEVFGALNEEQPLPR	ddPTM_K562_Methotrexat_30min_R1	1	VRHFSQSEETGNEVFGALNEEQPLPR	26	1	A0A1B0GUI1;Q6GYQ0-3;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-2	A0A1B0GUI1	RALGAPA1	Ral GTPase-activating protein subunit alpha-1	1	VRHFS(0.239)QS(0.183)EET(0.578)GNEVFGALNEEQPLPR	47.714	0.028191	9212400.0	609.96	508.7	798.53	932.56	680.12	467.81	549.6	688.98	647.13	808.9	True	False	583.1468887454821	592.7540285784379	630.9294655581166	850.8039126928052	769.5677010951472	558.2076616894246	672.8617904285287	664.7481828824186	617.0450675480996	662.4003715987392	0.8803541087062278	0.8948576329264338	0.9524896008668203	1.284425476150238	1.1617863366195793	0.8427043305277142	1.0157931958953168	1.0035443991041444	0.9315288668374806	1.0	9.371559671946969	-7.007512557395715	24.395998677622714	1.0376958057889651	0.8966227204572375	0.21538333364568496	0.11353496570408454	423.6571917398227	1375791.3889513523	0.03275809963860177	0.06389163712976513	9.828504539870655e-08	7.007512557395715	-0.1410730853317277	
VRHSSSPY(ph)VVYPS(ph)DK	ddPTM_K562_Methotrexat_30min_R1	1	VRHSSSPYVVYPSDK	15	1	F5H1B0;F5GYW0	F5H1B0	CEP57		2	VRHSSSPY(0.616)VVY(0.383)PS(0.999)DK	72.321	0.026581	0.0	2499.2	2168.2	2573.8	2445.1	1960.8	1878.6	2214.5	2351.4	2209.6	2358.5	True	False	2389.338160457583	2526.4581969014525	2033.5945530580952	2230.741879262651	2218.6795687634017	2241.6128625932583	2711.157996550176	2268.6999292137925	2106.876178286096	1931.352795667729	1.2371319035119703	1.3081287906428183	1.052937898047269	1.155015222628662	1.1487696984932962	1.1606439111598266	1.4037611370805219	1.1746688302120547	1.09088105653824	1.0	10.915396006729353	-9.91529542873476	2.837605746787352	1.0039438172041386	1.2056390372791912	0.3539219491702482	0.09085899468401697	0.2814809598315457	4.691684273668867	0.0913117824327797	0.024741470668642882	1.2153589716868472e-10	9.91529542873476	0.20169522007505258	
VRLSHLLR	ddPTM_K562_Methotrexat_30min_R1	1	VRLSHLLR	8	1	P78310-4;P78310-5	P78310-4			0		30.612	0.034232	4832700.0	437.65	464.36	442.34	471.46	291.11	102.36	303.42	353.51	424.97	473.46	False	True	418.4114300273134	541.087597229572	349.49887893376257	430.1278337888712	329.3960675554434	122.13962132175345	371.4696587551387	341.07685292862476	405.21323745756825	387.71180607879677	1.0791815556482625	1.395592264011697	0.9014398670716053	1.1094009185303324	0.8495899851151255	0.31502683025579664	0.9581076792890927	0.8797174797904036	1.0451403106750239	1.0	8.59884085654296	-7.770199173691977	5.038492583445905	0.8126081196649302	1.1280092523048693	0.2744864723708845	0.22092364129914144	0.2362080413505761	16.455510985012197	0.07070958187232754	0.08541611167961281	1.6974649920781342e-08	7.770199173691977	0.3154011326399391	
VRPSSDLNNSTGQS(ph)PHHK	ddPTM_K562_Methotrexat_30min_R1	2	VRPSSDLNNSTGQSPHHK	18	1	J3KNR0;P27448-8;P27448-3;P27448-4;P27448-2;P27448	J3KNR0	MARK3	MAP/microtubule affinity-regulating kinase 3	1	VRPSSDLNNSTGQS(0.999)PHHK;VRPSSDLNNSTGQS(1)PHHK	93.06200000000001	0.0024326	53539000.0	5257.4	4019.2	7751.1	5407.7	4288.3	3871.3	3415.3	4988.0	5512.3	7101.0	True	False	5026.290991033009	4683.304485281022	6124.250035048807	4933.615336995888	4852.286615018408	4619.373935354673	4181.26796370188	4812.569212774688	5256.0343761614995	5814.940089903131	0.8643753698787876	0.8053917001506097	1.0531922840757642	0.8484378619072025	0.8344516951161299	0.7943975112272612	0.7190560692038934	0.8276214609899548	0.903884527596063	1.0	12.505548612655526	-5.913140233501531	18.48258329167554	0.8560654048051112	1.1994049425288702	0.0	0.0939891185260534	3169.528383654505	1263907.3546694063	0.023326226729242814	129880.72922666997	1.2214052052678634e-06	5.913140233501531	0.343339537723759	
VRS(ph)PDEALPGGLSGCSSGSGHSPYALER	ddPTM_K562_Methotrexat_30min_R1	2	VRSPDEALPGGLSGCSSGSGHSPYALER	28	1	Q5JSZ5-5	Q5JSZ5-5	PRRC2B	Protein PRRC2B	1	VRS(1)PDEALPGGLSGCSSGSGHSPYALER;VRS(1)PDEALPGGLSGCSSGSGHSPYALER	139.0	6.0071e-22	79334000.0	1759.6	1397.85	2221.55	1843.4	1576.23	1582.9099999999999	1595.65	1783.0700000000002	1818.65	2077.1	True	False	1682.2500908855484	1628.820953112578	1755.2770142770273	1681.7919840631346	1783.531873047702	1888.7849549278692	1953.51513081747	1720.3584174463024	1734.101358454023	1700.9170624894805	0.989025348727697	0.9576133892904914	1.0319592018837092	0.9887560194155768	1.0485707459700038	1.11045094236601	1.1485069871415625	1.011429925294751	1.0195096496451002	1.0	10.73209708089427	-7.835879476817028	4.346491833907239	1.0657285878447802	0.9920112177484365	0.31516057406947473	0.04595422103507037	0.2563776169206178	9.215948715259398	0.015426673786689563	0.017977580615082225	1.4592191591263849e-08	7.835879476817028	-0.07371737009634372	
VRVRT(ph)S(ph)GSVKY(ph)SR	ddPTM_K562_Methotrexat_30min_R1	1	VRVRTSGSVKYSR	13	3	A0A087WXD8;A0A087X1Z0;B4DKF8	A0A087WXD8	PSD3		3	VRVRT(0.851)S(0.879)GS(0.229)VKY(0.836)S(0.205)R	61.532	0.028620999999999997	800600000.0	7563.6	5817.0	6370.4	7936.1	7026.7	6310.4	6943.7	8224.3	8426.9	9764.7	True	False	7231.113200398924	6778.160377905979	5033.34009666691	7240.35443459013	7950.834213499489	7529.795490316457	8501.001481438454	7935.046707422387	8035.135258326889	7996.218208122394	0.9043166422164053	0.8476707615383561	0.6294650753219999	0.9054723428176994	0.9943243176409563	0.9416695860885645	1.0631277511665842	0.992349946048512	1.004866931991046	1.0	12.965102126864767	-7.52561532324402	5.462383699548178	0.9963510805733741	0.7936565305162167	0.6295046936414594	0.07064973262800744	0.10915995531581589	10.916321018996657	0.02130600260359861	0.029245387671771532	2.981155821977354e-08	7.52561532324402	-0.20269455005715742	
VRYDS(ph)SNQVK	ddPTM_K562_Methotrexat_30min_R1	3	VRYDSSNQVK	10	1	O95983-2;O95983;A0A087WZ12;A0A087WT34;A0A087X1H1;A0A0A0MTS6;K7EIE8	O95983-2	MBD3	Methyl-CpG-binding domain protein 3	1	VRYDS(0.784)S(0.216)NQVK;VRYDS(0.5)S(0.5)NQVK;VRYDS(0.764)S(0.236)NQVK	113.52	0.001972	159837000.0	13680.2	10102.9	17695.1	14836.2	9482.599999999999	9772.4	9522.099999999999	11862.800000000001	12827.1	16608.3	True	False	13078.834788208971	11772.232505062118	13981.140327849209	13535.533380686493	10729.728110340591	11660.777993402731	11657.673316301847	11445.578600100947	12230.770920751984	13600.375932282519	0.9616524464713073	0.8655814047844788	1.0279966081424918	0.9952322971130443	0.7889287887161989	0.8573864466293272	0.8571581678584798	0.8415633992096616	0.8992965328054224	1.0	13.731358909565058	-7.745720709035513	24.99863130374877	0.8644553883869801	0.9603547406654683	0.30961355877697194	0.06379132906094068	276.0221783840441	438977.87565034645	0.018488481915902064	0.023785533962512432	1.7958881754550552e-08	7.745720709035513	0.09589935227848823	
VS(ph)FFLPR	ddPTM_K562_Methotrexat_30min_R1	2	VSFFLPR	7	0	Q13107-3	Q13107-3			1	VS(1)FFLPR;VS(1)FFLPR	94.163	0.0087574	16293000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
VS(ph)HSPALSSDVR	ddPTM_K562_Methotrexat_30min_R1	1	VSHSPALSSDVR	12	0	F8W108;F8WCU9;Q68CP9-3;Q68CP9;F8VWP4	F8W108	ARID2	AT-rich interactive domain-containing protein 2	1	VS(0.591)HS(0.398)PALS(0.006)S(0.006)DVR	89.35600000000001	0.021312	0.0	1282.1	1080.7	1075.8	1091.4	1139.6	998.46	1001.6	992.08	1319.9	1283.4	True	False	1225.740419143193	1259.267306240845	850.0042816768587	995.7186565078146	1289.4773748280159	1191.3982640183472	1226.2342963850335	957.1879840837031	1258.5381370926038	1050.9638235997293	1.1663012480722927	1.198202333861161	0.8087854810886353	0.9474338070908181	1.2269474418361397	1.1336244286103077	1.1667711759905999	0.9107715818468156	1.1975085239203547	1.0	10.037497294198593														
VS(ph)LY(ph)GY(ph)LRGAHLK	ddPTM_K562_Methotrexat_30min_R1	1	VSLYGYLRGAHLK	13	1	Q14692	Q14692	BMS1	Ribosome biogenesis protein BMS1 homolog	3	VS(1)LY(1)GY(1)LRGAHLK	56.551	0.028061000000000003	8922000.0	1279.4	1382.5	1113.0	1453.9	1275.9	1391.8	1603.8	1504.3	1345.9	1572.4	True	False	1223.1591079103055	1610.9346265179674	879.3965100449384	1326.4388443253724	1443.7032138847524	1660.7456521650683	1963.4929757810655	1451.3929163546422	1283.3294027675859	1287.6231231324725	0.9499356495980424	1.2510917189798185	0.6829611042597477	1.0301452501866157	1.1212156631457308	1.289776194858073	1.5248972626434099	1.1271876764870126	0.9966653904486888	1.0	10.330494674736487	-7.854274582630552	3.148150155731786	1.21516422985011	0.9742498477431517	0.20376741262245435	0.19190057019800683	0.3791411564088559	7.5154478161326805	0.06449398937982118	0.0760183433380879	1.3987027133437066e-08	7.854274582630552	-0.24091438210695826	
VS(ph)PGQAAPAMARPR	ddPTM_K562_Methotrexat_30min_R1	1	VSPGQAAPAMARPR	14	1	Q96HA7-2;Q96HA7	Q96HA7-2	TONSL	Tonsoku-like protein	1	VS(1)PGQAAPAMARPR	89.311	0.016846	27863000.0	1586.2	1171.3	1656.9	1504.2	1286.0	1171.2	980.56	1710.7	1681.4	1972.5	True	False	1516.4725472622515	1364.837416304156	1309.1393328782185	1372.3291214211613	1455.131540916837	1397.5178242676607	1200.475540798032	1650.53371136601	1603.2320809966711	1615.2611360842045	0.9388404842938021	0.8449639416279537	0.8104815398777553	0.8496020183758207	0.9008645775038199	0.8651962169136268	0.7432083357792436	1.0218370729622797	0.9925528728334944	1.0	10.657551706100577	-9.285258275972652	24.90740640571552	1.0053962655399498	0.851176136849671	0.6742347201602588	0.04916206708493963	460.2826248149063	481314.16464344005	0.02698611906370377	0.01297532615620724	5.184915990224197e-10	9.285258275972652	-0.1542201286902788	
VS(ph)S(ph)T(ph)EDWS(ph)FNSKFSLHR	ddPTM_K562_Methotrexat_30min_R1	1	VSSTEDWSFNSKFSLHR	17	1	E9PFW2;A0A2R8Y524;A0A2R8YEC9;O00462	E9PFW2	MANBA	Beta-mannosidase	4	VS(1)S(1)T(1)EDWS(1)FNSKFSLHR	65.887	0.027245	76287000.0	1030.3	1001.7	907.28	1012.3	946.27	1014.9	908.14	1122.2	1116.5	1148.2	True	False	985.009245646387	1167.2138990112458	716.8543267147987	923.5532306971417	1070.7210911534805	1211.0150613466933	1111.813512299425	1082.7315899309854	1064.5941586967892	940.2498537145165	1.0476037212396745	1.2413869509259623	0.7624083363404104	0.9822423551023021	1.13876230549096	1.2879715498625197	1.1824660306057324	1.1515360365689884	1.1322460242785923	1.0	9.876900366583664	-7.832021306897926	5.641507903874465	1.1669745019178146	1.0077429682765262	0.2210485369717351	0.12709321226939066	0.29563596689153	16.912819862412352	0.04076986566636363	0.04686532083353821	1.4722402711610979e-08	7.832021306897926	-0.1592315336412884	
VS(ph)SPSPELGTTPASIFR	ddPTM_K562_Methotrexat_30min_R1	2	VSSPSPELGTTPASIFR	17	0	A0A5E8;Q99501	A0A5E8	GAS2L1	GAS2-like protein 1	1	VS(0.7)S(0.3)PSPELGTTPASIFR;VS(0.916)S(0.084)PSPELGTTPASIFR	225.29	5.6172e-40	46313000.0	3598.5	2807.7	4369.0	4338.6	3040.1	2721.1000000000004	2788.2	3178.0	3297.9	3679.9	True	False	3440.314248722238	3271.6247022600355	3452.006605917641	3958.241674111056	3439.9264366572893	3246.9140638786953	3413.524825460015	3066.227938692454	3144.5813488277145	3013.43445103993	1.1416588960596081	1.0856797303591603	1.14553897289067	1.3135316989374284	1.1415302016840545	1.0774795724387474	1.13276889904873	1.017519374823071	1.043520740178213	1.0	11.557192967941873	-9.033799493009928	1.1149391466505834	1.0107750025701374	1.1636931374923718	0.49484609360988197	0.06027668133057268	0.4863355991022711	1.119248160985911	0.05224225956455108	0.023656667770031774	9.251251912317663e-10	9.033799493009928	0.15291813492223438	
VS(ph)SPVFGATSSIK	ddPTM_K562_Methotrexat_30min_R1	1	VSSPVFGATSSIK	13	0	F6Q6H0;I6L8A6;Q99708-3;Q99708;Q99708-2	F6Q6H0	RBBP8	DNA endonuclease RBBP8	1	VS(0.586)S(0.414)PVFGATSSIK	117.7	0.0013772	9613700.0	2316.0	1651.3	2769.3	2379.2	1503.1	1293.2	1292.0	2216.4	2038.3	2585.9	True	False	2214.191413100097	1924.1492576991823	2188.061774723672	2170.6192299463	1700.7839962302467	1543.092597628875	1581.7638887075302	2138.4479557325203	1943.5398778967008	2117.568452116675	1.045629203101718	0.9086597676574965	1.03328974916326	1.025052686148869	0.8031778120467276	0.7287096651286212	0.7469717860248786	1.0098601316028177	0.917816789324558	1.0	11.048192891259973	-7.755166849096511	24.99290954542285	0.8552575039134716	0.9985602861731885	0.31977650034128224	0.095615932569493	187.89791776924798	748675.5372732893	0.0305286977283757	0.038430227436516536	1.7572483771228367e-08	7.755166849096511	0.14330278225971693	
VSALEEDMDDVES(ph)S(ph)EEEEEEDEKLER	ddPTM_K562_Methotrexat_30min_R1	2	VSALEEDMDDVESSEEEEEEDEKLER	26	1	Q8NAV1	Q8NAV1	PRPF38A	Pre-mRNA-splicing factor 38A	2	VSALEEDMDDVES(1)S(1)EEEEEEDEKLER;VSALEEDMDDVES(1)S(1)EEEEEEDEKLER	84.948	0.00047384	17237000.0	3568.5	2520.99	5408.5	3297.2	2382.3999999999996	2266.06	2260.56	3027.2	3174.6000000000004	4359.200000000001	True	False	3411.6330128012537	2937.5407479967675	4273.329761525648	3008.139595233249	2695.727358538313	2703.94402395831	2767.5481240376907	2920.7316601667058	3027.013538915206	3569.7066384883437	0.9557180346466708	0.8229081673895539	1.1971095090702653	0.8426853800252616	0.7551677578972896	0.7574695339960327	0.7752872726845864	0.8181993524833575	0.8479726334590478	1.0	11.80158980188892	-7.497739400099945	24.894307741736096	0.8095953849216321	0.9824925350410371	0.3190503978231949	0.1081211201391602	776.2793238204825	768713.1301479571	0.029473120848117613	0.043498633217550334	3.178780936934143e-08	7.497739400099945	0.17289715011940499	
VSDQNS(ph)PVLPK	ddPTM_K562_Methotrexat_30min_R1	2	VSDQNSPVLPK	11	0	Q9UPU5	Q9UPU5	USP24	Ubiquitin carboxyl-terminal hydrolase 24	1	VSDQNS(1)PVLPK;VSDQNS(1)PVLPK	145.0	1.8969e-07	180709000.0	10775.6	7101.8	13943.2	10442.599999999999	7800.799999999999	6216.6	6317.0	9851.3	10011.4	12968.2	True	False	10301.917526339132	8275.251740040005	11016.712865102047	9527.113471182434	8826.741931869416	7417.869967846935	7733.748053378851	9504.824195230009	9545.972199173342	10619.533315572715	0.9700913609105756	0.7792481547098681	1.037400847826985	0.8971310874096198	0.8311798333854925	0.6985118599297776	0.7282568662445754	0.8950321932972259	0.8989069402112917	1.0	13.374432746623466	-6.230355039194979	22.618520939296047	0.8557661333894555	0.9700920664215632	0.08514436358863808	0.10312885194304103	8857.296906844096	6444629.388245408	0.027062896898223755	2.7364480213647875	5.883624676956126e-07	6.230355039194979	0.1143259330321077	
VSDQNS(ph)PVLPKK	ddPTM_K562_Methotrexat_30min_R1	1	VSDQNSPVLPKK	12	1	Q9UPU5	Q9UPU5	USP24	Ubiquitin carboxyl-terminal hydrolase 24	1	VS(0.002)DQNS(0.998)PVLPKK	73.834	0.032227	24454000.0	5732.4	3963.4	8445.2	6015.4	3438.6	2742.6	2937.5	4346.1	4819.1	6963.9	True	False	5480.410559781955	4618.284483718852	6672.66793048653	5488.039221511002	3890.8361715370443	3272.5686345939903	3596.3091509894525	4193.245199607069	4595.061092857771	5702.670228429294	0.9610253337919986	0.8098459666658442	1.1700953523879998	0.9623630688219879	0.6822832139477774	0.5738660142540567	0.630636001545542	0.7353125871986513	0.8057735953150852	1.0	12.477421892231108	-7.7488759968775796	11.767924964392325	0.7111569782021157	0.9779508978937311	0.41559080069092014	0.1359557818228088	0.4136100620151849	379.5838156253012	0.04052611674724321	0.05091974255562608	1.7828877586935706e-08	7.7488759968775796	0.2667939196916155	
VSDS(ph)LTDLALK	ddPTM_K562_Methotrexat_30min_R1	1	VSDSLTDLALK	11	0	Q8N3C0	Q8N3C0	ASCC3	Activating signal cointegrator 1 complex subunit 3	1	VS(0.069)DS(0.929)LT(0.002)DLALK	96.82	0.009973200000000002	1875900.0	837.1	582.34	748.64	863.88	513.3	629.22	590.36	755.1	763.82	1004.7	True	False	800.3020863152384	678.5617869124577	591.5106947709278	788.1449816602264	580.8079470860131	750.8078597897006	722.7632580010662	728.5427050052454	728.3101749178522	822.7390942579462	0.9727288904838727	0.8247593819818098	0.7189529449848612	0.9579525115080118	0.7059442673133962	0.9125710265012718	0.8784841549956353	0.885508796275617	0.8852261670812394	1.0	9.684291187740264	-10.374219853394951	0.5723790222147536	1.0033536299741843	0.8404592280632687	0.21674645059009068	0.08355988089115324	2.1680698558371705	1.3963416945613167	0.10187141861620597	0.03710216767224763	4.2245470039649434e-11	10.374219853394951	-0.16289440191091564	
VSDS(ph)PSHIATK	ddPTM_K562_Methotrexat_30min_R1	4	VSDSPSHIATK	11	0	Q9P2D3	Q9P2D3	HEATR5B	HEAT repeat-containing protein 5B	1	VS(0.043)DS(0.832)PS(0.096)HIAT(0.028)K;VS(0.104)DS(0.658)PS(0.194)HIAT(0.044)K;VS(0.484)DS(0.485)PS(0.016)HIAT(0.015)K;VS(0.012)DS(0.986)PS(0.002)HIATK	196.02	4.3415e-08	104365000.0	11160.4	8132.099999999999	15257.5	12316.3	8335.2	7724.1	7247.1	10061.099999999999	10320.400000000001	12858.7	True	False	10669.802179085642	9475.79130293437	12055.159256074256	11236.549101289349	9431.424898794725	9216.673007535714	8872.44665468448	9707.245410314234	9840.606856618315	10529.864826649402	1.0132895677902798	0.8998967659064967	1.14485413198891	1.0671123785797745	0.8956833780928791	0.8752888246209761	0.842598342974901	0.9218774951171975	0.9345425623806028	1.0	13.36219929595351	-7.769886264741957	24.90256765261827	0.9024868016579474	1.0300149612753333	0.4182328138346568	0.06860013528649646	170.52244957704718	502722.09689484764	0.021964519406948817	0.02531149847008547	1.6986884554280918e-08	7.769886264741957	0.12752815961738595	
VSGEEELHTGPPAPQGPLSVPQGLPTQSLAS(ph)PPAR	ddPTM_K562_Methotrexat_30min_R1	1	VSGEEELHTGPPAPQGPLSVPQGLPTQSLASPPAR	35	0	Q9UPN7	Q9UPN7	PPP6R1	Serine/threonine-protein phosphatase 6 regulatory subunit 1	1	VSGEEELHTGPPAPQGPLS(0.088)VPQGLPT(0.088)QS(0.088)LAS(0.737)PPAR	75.653	2.8453e-08	25213000.0	1185.9	840.17	1203.0	1042.1	813.83	806.34	844.9	1125.0	1283.7	1125.3	True	False	1133.7692559565655	978.9938120517909	950.5067399677087	950.740710964627	920.8629097545482	962.1537930498502	1034.39033248374	1085.4331123439297	1224.0210671912846	921.4972656200531	1.2303555292632147	1.0623947010771104	1.031480803503129	1.0317347065863476	0.9993116030951237	1.0441200738696064	1.1225104740682261	1.1779016095219428	1.3282959297417671	1.0	9.847836074695019	-9.043459740200396	3.045000672125842	1.188677251024641	1.0605996272698848	0.18009630126792708	0.09481166351788467	0.3657862559515741	6.747604886882291	0.04816899773197227	0.02692599735994105	9.047743078896336e-10	9.043459740200396	-0.1280776237547563	
VSGRTS(ph)PPLLDR	ddPTM_K562_Methotrexat_30min_R1	1	VSGRTSPPLLDR	12	1	Q9UQ35	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	VS(0.005)GRT(0.247)S(0.748)PPLLDR	81.128	0.02401	1062700000.0	2544.6	2252.1	3701.0	3130.5	1954.9	2443.2	2439.9	2302.3	2893.4	2855.8	True	False	2432.7424308180107	2624.221245845291	2924.210677157515	2856.053925414803	2212.0036153486194	2915.313821935406	2987.1096842550355	2221.326804043939	2758.886465538104	2338.586946732201	1.0402616991501543	1.1221396961580659	1.25041777097218	1.2212733545809271	0.9458718729442747	1.2466133987487993	1.2773139302898449	0.9498585490472723	1.179723708538271	1.0	11.191421352626769	-10.14705705107397	0.924322863205538	1.0057496398052148	1.1490110222185748	0.10421627921188514	0.11650672749018115	1.7284000661660512	3.1577448969422623	0.11242100026500712	0.038257021181311225	7.12759392372598e-11	10.14705705107397	0.14326138241335995	
VSGS(ph)PEQAVEENLSSYSLDR	ddPTM_K562_Methotrexat_30min_R1	1	VSGSPEQAVEENLSSYSLDR	20	0	A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91	A0A494BZT8	TACC3	Transforming acidic coiled-coil-containing protein 3	1	VS(0.007)GS(0.992)PEQAVEENLSSYSLDR	104.49	0.00022298	8683000.0	769.7	648.97	953.09	677.12	827.22	563.61	545.42	871.25	996.29	1077.7	True	False	735.8649096127574	756.2012618961055	753.0494337454895	617.7579408966203	936.0139294535189	672.519655853395	667.7443190238864	840.6076436707986	949.9726953587319	882.5180868734831	0.833824168091243	0.8568677210629382	0.8532963176010759	0.6999946517642096	1.0606172761507435	0.7620463148080575	0.7566352791584356	0.9525103861030638	1.0764342504573723	1.0	9.785482035949235	-9.49242829883705	5.027081383421229	1.0336199479748807	0.8351605152432773	0.4564209204843931	0.09194076178676645	0.1656913482326622	11.140123498534582	0.055975864189656714	0.023757854988011338	3.217893756759012e-10	9.49242829883705	-0.19845943273160338	
VSGS(ph)PEQAVEENLSSYSLDRR	ddPTM_K562_Methotrexat_30min_R1	4	VSGSPEQAVEENLSSYSLDRR	21	1	A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91	A0A494BZT8	TACC3	Transforming acidic coiled-coil-containing protein 3	1	VS(0.178)GS(0.822)PEQAVEENLSSYSLDRR;VS(0.121)GS(0.879)PEQAVEENLSSYSLDRR;VS(0.116)GS(0.884)PEQAVEENLSSYSLDRR;VS(0.179)GS(0.821)PEQAVEENLSSYSLDRR	173.25	1.2914000000000001e-17	398277000.0	3285.64	2529.32	4194.06	3325.84	3184.16	2746.31	2983.01	3235.5299999999997	3201.05	3624.3900000000003	True	False	3141.2071997142507	2947.247138910976	3313.784121221088	3034.2687708997178	3602.9328517307604	3276.9955395871884	3652.0259269763565	3121.734575984139	3052.2338841884093	2967.977849942828	1.0583661194691056	0.9930152069590913	1.1165124164538227	1.0223353826438317	1.2139352225287543	1.1041172492747253	1.2304761395192707	1.0518052134534202	1.028388363561138	1.0	11.535264609809186	-6.770762093508768	24.990957832102644	1.1044778345694446	1.0256906601041842	0.11487394210193014	0.07507585794447254	324.19178696327197	869052.5870820549	0.019584708177230188	0.04165146814547962	1.6952662128620701e-07	6.770762093508768	-0.0787871744652604	
VSIGNITLS(ph)PAISR	ddPTM_K562_Methotrexat_30min_R1	2	VSIGNITLSPAISR	14	0	Q0JRZ9-3;Q0JRZ9	Q0JRZ9-3	FCHO2	F-BAR domain only protein 2	1	VSIGNITLS(1)PAISR;VSIGNITLS(1)PAISR	226.06	2.9596e-36	25844000.0	2545.8	2002.2200000000003	2182.0299999999997	2223.49	1971.86	1770.0500000000002	1483.1599999999999	2344.85	2488.69	2687.6	True	False	2433.889680254849	2333.0528230790624	1724.051722204273	2028.5600838909295	2231.1941526222977	2112.0871113771964	1815.7963848107281	2262.3802964263673	2372.9913451026537	2200.8495966235273	1.105886419494019	1.0600691781293718	0.783357356563237	0.9217168165435208	1.0137876554787406	0.9596689908376713	0.8250433776103849	1.0279577031966376	1.0782160438147252	1.0	11.103844841241177	-9.494929752648154	24.790637941720696	1.0437677072102511	0.9500067976156362	0.1400843966968347	0.0937358285768891	1177.883352359853	1044783.2559532025	0.05396758735191648	0.025821750519657537	3.1994125744403787e-10	9.494929752648154	-0.09376090959461492	
VSIGNITLS(ph)PAISRHS(ph)PVQMNR	ddPTM_K562_Methotrexat_30min_R1	2	VSIGNITLSPAISRHSPVQMNR	22	1	Q0JRZ9-3;Q0JRZ9	Q0JRZ9-3	FCHO2	F-BAR domain only protein 2	2	VSIGNIT(0.003)LS(0.607)PAIS(0.458)RHS(0.932)PVQMNR;VSIGNIT(0.008)LS(0.775)PAIS(0.258)RHS(0.958)PVQMNR	49.326	0.02932	16668900.0	2637.1	1855.57	2703.3999999999996	2224.1	1859.35	2176.5	1885.12	2684.8	2285.12	3320.7	True	False	2521.1762415743824	2162.171403202853	2135.9932841468876	2029.1166061380163	2103.887115554992	2597.0778214810116	2307.906146966208	2590.3740622408727	2178.885269969734	2719.2890517590945	0.927145365419482	0.7951237849481854	0.7854969602312503	0.7461937909195019	0.7736901357338227	0.9550576536911275	0.8487167428829366	0.9525923919581748	0.8012701954432627	1.0	11.40901379806044	-8.253421825553339	24.958621901857338	0.9046387560259798	0.8005424781233264	0.3675681836755941	0.06906994121432816	671.7290961643791	2091092.7459961777	0.022401692303595854	0.02201592366645259	5.5792802199676535e-09	8.253421825553339	-0.10409627790265341	
VSLEPHQGPGT(ph)PESK	ddPTM_K562_Methotrexat_30min_R1	1	VSLEPHQGPGTPESK	15	0	A0A087WY61;Q14980-5;Q14980-2;Q14980;H0YFY6	A0A087WY61	NUMA1	Nuclear mitotic apparatus protein 1	1	VSLEPHQGPGT(0.979)PES(0.021)K	99.846	0.0071219	35641000.0	1939.8	1208.9	2425.2	2392.4	1453.5	1272.9	1143.9	1665.1	1760.4	2238.3	True	False	1854.528714650938	1408.650177213433	1916.1836623189436	2182.662006440624	1644.6607268449623	1518.8699099302457	1400.4486937248798	1606.537489212335	1678.559388239882	1832.9221804295432	1.0117880259468142	0.7685269959924416	1.0454255411268405	1.190809969864143	0.8972888998809201	0.8286603360183574	0.7640524560604566	0.8764897420990588	0.9157832264578268	1.0	10.839929819971612	-7.981805790459787	24.994337826157217	0.8623026580908705	0.9969814467022651	0.22253590212214114	0.11186326835131102	371.65437753823994	510558.72944424703	0.03660435991542032	0.041498463777560404	1.0427836412960128e-08	7.981805790459787	0.1346787886113946	
VSLGITTVLT(ph)MT(ph)T(ph)LMVS(ph)AR	ddPTM_K562_Methotrexat_30min_R1	1	VSLGITTVLTMTTLMVSAR	19	0	A0A1W2PRC4;A0A1W2PQR3;O14764	A0A1W2PRC4	GABRD	Gamma-aminobutyric acid receptor subunit delta	4	VS(0.004)LGIT(0.431)T(0.461)VLT(0.513)MT(0.848)T(0.825)LMVS(0.918)AR	52.784	0.027252999999999996	0.0	63.596000000000004	177.61	144.2	210.62	53.836999999999996	0.0	0.0	0.0	0.0	122.99	True	False	60.800395987700284	206.95703364618896	113.93439060959568	192.1552716086457	60.917509151119575	0.0	0.0	0.0	0.0	100.7153192025329	0.6036856802829972	2.0548714464182942	1.131251844423786	1.9079051045078075	0.6048484940867621	0.0	0.0	0.0	0.0	1.0	6.65413932949101	-7.951056344310325	4.849747791685642	0.1386893297539929	1.443463565811203	0.5989134799055008	0.4713772720451913	0.12108256787174539	6.251176703829693	0.13993707179881956	0.15744027196120203	1.1192926597381627e-08	7.951056344310325	1.30477423605721	
VSLPSS(ph)PVPASPASSSGADQR	ddPTM_K562_Methotrexat_30min_R1	2	VSLPSSPVPASPASSSGADQR	21	0	Q5T6S3-2	Q5T6S3-2			1	VSLPS(0.003)S(0.997)PVPASPASSSGADQR;VSLPS(0.053)S(0.947)PVPASPASSSGADQR	203.93	7.2056e-27	81455000.0	4513.3	3767.8	5385.8	4250.2	3385.54	3143.33	3478.0	3784.7	3712.38	4112.4	True	False	4314.90073607283	4390.36490835038	4255.3941813117945	3877.591564861198	3830.797851505124	3750.7340356516943	4258.03003477151	3651.589955811619	3539.792264095644	3367.604510029242	1.281296756558674	1.3037056148592272	1.2636264646393538	1.1514391174240135	1.1375438654083105	1.1137691568239185	1.26440917337248	1.0843286214092613	1.0511306341209605	1.0	11.717507003552724	-3.0000000000000018	0.11638404238358978	0.9250983463963327	2.146796087461722	0.7204645440864377	0.053563116054221926	56.599244059482366	0.45635114194772475	0.4402412530088567	11.169543612963219	0.000999999999999996	3.0000000000000018	1.2216977410653893	
VSLPSSPVPASPAS(ph)SSGADQRLPSQSLSSK	ddPTM_K562_Methotrexat_30min_R1	1	VSLPSSPVPASPASSSGADQRLPSQSLSSK	30	1	Q5T6S3-2	Q5T6S3-2			1	VS(0.002)LPS(0.01)S(0.105)PVPAS(0.278)PAS(0.394)S(0.105)S(0.105)GADQRLPSQSLSSK	70.295	5.9561999999999997e-05	9864200.0	466.76	459.74	519.56	584.07	369.59	527.6	398.31	437.58	553.39	498.86	True	False	446.24178928264325	535.7042207561447	410.5114562075002	532.8654899271758	418.1975631473201	629.5512329948916	487.6411567423346	422.190063377295	527.66301968761	408.51161994776476	1.0923600884099771	1.3113561392076036	1.0048954207471288	1.3044071793975207	1.0237103248147357	1.5410852525453023	1.1937020464795784	1.0334836091841875	1.2916719963928587	1.0	8.674233305606124	-12.292534710824972	3.0419903762586977	0.9986231008031523	1.2000781216668146	0.12265492490647212	0.16016931744617377	30079920.825280532	39596384.92137267	387814.1886819889	0.03824761807069114	5.098768442291185e-13	12.292534710824972	0.2014550208636623	
VSPAS(ph)PAGS(ph)PSADFAVHGESLGDR	ddPTM_K562_Methotrexat_30min_R1	1	VSPASPAGSPSADFAVHGESLGDR	24	0	A0A0A0MRP9;Q96C92-4;Q96C92-3;Q96C92-2;Q96C92	A0A0A0MRP9	SDCCAG3	Serologically defined colon cancer antigen 3	2	VS(0.13)PAS(0.967)PAGS(0.866)PS(0.036)ADFAVHGESLGDR	86.869	0.00081291	13454000.0	1216.9	994.4	1339.8	1418.8	1113.9	957.63	737.75	951.2	1203.1	1546.9	True	False	1163.4065330749181	1158.7076980900301	1058.5942894503214	1294.4160068291073	1260.397374360237	1142.678444376228	903.2092174102017	917.7457568547073	1147.1681435988419	1266.7414202325244	0.918424640177442	0.914715252523547	0.835683015130274	1.0218470685134011	0.994991838293941	0.902061325322793	0.7130178290407585	0.7244933671516361	0.9056056155393312	1.0	10.306906342036529	-8.540204636556982	24.21342281386784	0.8120658544025615	0.9363142037663525	0.19891786650529097	0.09122527330662641	218.9306451175815	305957.85841232317	0.03475376068180113	0.026927151084650526	2.882672887533985e-09	8.540204636556982	0.12424834936379103	
VSPAS(ph)PAGSPSADFAVHGESLGDR	ddPTM_K562_Methotrexat_30min_R1	2	VSPASPAGSPSADFAVHGESLGDR	24	0	A0A0A0MRP9;Q96C92-4;Q96C92-3;Q96C92-2;Q96C92	A0A0A0MRP9	SDCCAG3	Serologically defined colon cancer antigen 3	1	VS(0.055)PAS(0.927)PAGS(0.018)PSADFAVHGESLGDR;VS(0.053)PAS(0.942)PAGS(0.006)PSADFAVHGESLGDR	86.449	0.00026079	66972000.0	1451.5500000000002	1191.25	1548.1100000000001	1361.01	1121.12	1089.18	1010.7	1120.08	1489.49	1870.08	True	False	1387.7416000368953	1388.083814712137	1223.1828671749045	1241.6923664043434	1268.5669309118853	1299.6486200784234	1237.3752030315034	1080.6861515326123	1420.2439350087598	1531.3903905542961	0.906197145154211	0.9064206118008299	0.7987400696253331	0.8108267977017312	0.8283759247390339	0.8486723098791339	0.8080076841696961	0.7056895212340017	0.9274212139301029	1.0	10.58062639422853	-6.747438622332804	24.289398514194378	0.8280276033706949	0.9063089725729025	0.0887338022829306	0.07510058555369503	302.4825583042954	524752.8865825359	0.01787075594705309	0.04672501151190277	1.7887983172835762e-07	6.747438622332804	0.07828136920220763	
VSPGLPS(ph)PNLENGAPAVGPVQPR	ddPTM_K562_Methotrexat_30min_R1	1	VSPGLPSPNLENGAPAVGPVQPR	23	0	C9JRJ5;Q9UGP4	C9JRJ5	LIMD1	LIM domain-containing protein 1	1	VS(0.035)PGLPS(0.965)PNLENGAPAVGPVQPR	101.61	1.4713e-05	8828400.0	2326.7	1848.8	2439.8	2313.2	1963.1	1731.1	1451.2	2168.3	2140.4	2424.9	True	False	2224.4210539119167	2154.282775773177	1927.7193218397467	2110.4053474746897	2221.2820590776396	2065.610575127856	1776.6685412479644	2092.0396599958617	2040.8932711819148	1985.7271122385737	1.1202048056866463	1.0848835988065777	0.9707876323784325	1.0627871949109675	1.118624027132065	1.0402288221764908	0.8947193853062061	1.0535383472895419	1.027781339441526	1.0	10.955451659355917	-8.532060561990221	24.990181761371097	0.9940431258405688	1.0674586617546236	0.3089976425110117	0.05445128784899148	278.7555590655609	758681.1659517528	0.021524965347682373	0.0166952482038209	2.9372400278175625e-09	8.532060561990221	0.07341553591405481	
VSPLNLSSVT(ph)P	ddPTM_K562_Methotrexat_30min_R1	4	VSPLNLSSVTP	11	0	Q9UJX2-3;Q9UJX2	Q9UJX2-3	CDC23	Cell division cycle protein 23 homolog	1	VSPLNLSSVT(1)P;VSPLNLSSVT(1)P;VSPLNLSSVT(1)P;VSPLNLSSVT(1)P	128.28	0.0028758000000000004	47840700.0	17048.3	14715.7	20902.6	18374.0	15419.4	14942.0	14551.699999999999	17385.399999999998	16617.5	19741.800000000003	True	False	16298.877145058032	17147.219300868313	16515.429910930197	16763.17994747535	17447.32137015014	17829.330029207104	17815.28914806918	16773.945627861478	15844.956052076937	16166.368718046704	1.0081965486079385	1.0606722882502782	1.021591811925818	1.0369168388917431	1.0792356449641962	1.1028654820487929	1.101996957930433	1.037582769539119	0.9801184377533732	1.0	13.980708037285325	-9.620631397769943	4.688503159819057	0.991320760220276	1.0597320122085656	0.4507513374870503	0.029855743554474488	0.21037360126190807	7.737553076746808	0.024364648956704593	0.008505554686039614	2.395347916698106e-10	9.620631397769943	0.06841125198828957	
VSPSTSYT(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	3	VSPSTSYTPSR	11	0	Q9BTE3;Q9BTE3-2	Q9BTE3	MCMBP	Mini-chromosome maintenance complex-binding protein	1	VSPS(0.001)T(0.004)S(0.004)YT(0.983)PS(0.008)R;VSPSTSYT(0.989)PS(0.01)R;VSPSTSYT(1)PSR	150.51	9.4428e-08	64545000.0	4088.97	2850.49	3522.63	3937.16	3201.97	2963.36	3626.17	3544.3199999999997	4123.9400000000005	4205.35	True	False	3909.2237747944328	3321.4850224543957	2783.27810258724	3591.995295635248	3623.0851789031776	3535.987380226959	4439.43092903606	3419.6642566602977	3932.218929526233	3443.7203643253265	1.1351745673926996	0.9645048584265992	0.8082183824854559	1.0430566119264364	1.052084604904612	1.0267928304683092	1.28913804239904	0.9930145002729507	1.1418519837619308	1.0	11.749752282977504	-7.845099163003527	1.98159034015994	1.0998466974022594	0.9686696396286485	0.16681064961959846	0.10982813146289298	0.5268857236217995	4.249661253612279	0.03885804865117161	0.0475844616683991	1.4285677346071273e-08	7.845099163003527	-0.13117705777361088	
VSS(ph)LAGFTDCHR	ddPTM_K562_Methotrexat_30min_R1	2	VSSLAGFTDCHR	12	0	H0YLN8;Q96QT4	H0YLN8	TRPM7	Transient receptor potential cation channel subfamily M member 7	1	VS(0.131)S(0.869)LAGFTDCHR;VS(0.231)S(0.769)LAGFTDCHR	162.94	4.3764999999999995e-06	22436000.0	7378.6	6087.4	6587.6	7150.2	5401.6	5741.2	5350.1	6338.2	6869.0	7199.0	True	False	7054.245578886173	7093.2393818918445	5204.952784880535	6523.3530674016665	6112.005078861885	6850.605646077089	6549.996115305081	6115.281913474038	6549.661689286388	5895.191340263714	1.1966101135184883	1.203224623676852	0.8829149868861929	1.1065549345018975	1.0367780664076753	1.1620667168659933	1.1110743888106056	1.0373339151364134	1.1110176601992017	1.0	12.525322924189386	-5.8717790239013254	0.01041560618939531	9.328303975988657e-07	2.2359933830315355	0.1022897664828386	0.08830084345956334	18973.273185584683	27.53026158873166	2711.198411726918	3215.2499954542045	1.3434483556442163e-06	5.8717790239013254	2.2359924502011377	
VSS(ph)QAEDTSSSFDNLFIDR	ddPTM_K562_Methotrexat_30min_R1	1	VSSQAEDTSSSFDNLFIDR	19	0	H8Y6P7;P0CAP2-3;Q9BZD3;P0CAP2	H8Y6P7	GCOM1;POLR2M;GCOM2	DNA-directed RNA polymerase II subunit GRINL1A;Putative GRINL1B complex locus protein 2	1	VS(0.009)S(0.991)QAEDTSSSFDNLFIDR	103.71	0.0046755	0.0	420.65	203.82	449.91	338.1	304.5	462.73	286.66	414.86	360.5	397.41	True	False	402.15872967208844	237.49779065236325	355.4800393839337	308.4592979341143	344.5470872544144	552.1460235855309	350.95080211834437	400.2691386551134	343.74043368579726	325.4351980183642	1.235756710155841	0.7297851987078587	1.092322039989891	0.9478363121517915	1.0587271731897043	1.6966389221192155	1.0784045618155302	1.2299503590651137	1.056248481353268	1.0	8.346226486453093	-8.016633020768445	24.873276486102124	1.235969323657109	0.9903606639164385	0.1749560988404706	0.21572753630556682	1022.6613203467886	1529302.8678822007	0.06809847905634522	0.06983808448982276	9.624251850371188e-09	8.016633020768445	-0.24560865974067048	
VSSDNVADLHEKYS(ph)GSTP	ddPTM_K562_Methotrexat_30min_R1	1	VSSDNVADLHEKYSGSTP	18	1	P28074-3;P28074	P28074-3	PSMB5	Proteasome subunit beta type-5	1	VSSDNVADLHEKY(0.11)S(0.297)GS(0.297)T(0.297)P	100.38	0.0026100000000000003	21708000.0	2205.7	1412.2	3184.3	2571.6	1738.1	1613.7	1318.1	1771.6	1409.3	2643.9	True	False	2108.7400690306076	1645.5420467042857	2515.958946034229	2346.1518206665705	1966.690615293588	1925.5246866638672	1613.717478100151	1709.2918238475618	1343.7819506058092	2165.0640900851845	0.9739850560024942	0.7600431110746203	1.1620713481674525	1.083640817567789	0.9083752413150081	0.8893615184334369	0.7453439764162637	0.7894878639737217	0.6206661302820546	1.0	11.08019401681017	-8.425826304886945	2.0533818207592667	0.771816543550533	0.9861454392867416	0.31116290016887505	0.1315849830186067	0.3867967999770904	3.2275157953604094	0.05675670166657621	0.046593973644655076	3.751230018585656e-09	8.425826304886945	0.2143288957362086	
VSSDNVADLHEKYSGS(ph)TP	ddPTM_K562_Methotrexat_30min_R1	5	VSSDNVADLHEKYSGSTP	18	1	P28074-3;P28074	P28074-3	PSMB5	Proteasome subunit beta type-5	1	VSSDNVADLHEKYS(0.084)GS(0.458)T(0.458)P;VSSDNVADLHEKY(0.011)S(0.013)GS(0.488)T(0.488)P;VSSDNVADLHEKYS(0.017)GS(0.491)T(0.491)P;VSSDNVADLHEKYS(0.104)GS(0.448)T(0.448)P;VSSDNVADLHEKY(0.001)S(0.028)GS(0.486)T(0.486)P	126.43	7.8314e-05	196247600.0	16350.300000000001	11625.0	21567.7	20248.300000000003	10811.7	10881.100000000002	10973.0	14380.600000000002	14339.099999999999	21806.100000000002	True	False	15631.560389296443	13545.833658785798	17040.934510059487	18473.16297651383	12233.628056711166	12983.718577218944	13433.974574913105	13874.826146998328	13672.478370773966	17856.803984570735	0.8753839938436337	0.7585810803820295	0.9543104423828472	1.0345167585686479	0.6850961721527378	0.7271020384407867	0.7523168528097638	0.7770050093503263	0.7656733188418119	1.0	14.124186269179154	-7.776204529369366	24.999983129143246	0.7689002197975539	0.8986620655327167	0.24358806676828104	0.10210107025864104	321.9499072003126	545115.240654233	0.031660062548476815	0.036047071855709135	1.6741542536287825e-08	7.776204529369366	0.1297618457351628	
VSSQS(ph)FSEIER	ddPTM_K562_Methotrexat_30min_R1	1	VSSQSFSEIER	11	0	E9PIY6;Q8N6H7;E9PQP3;A0A0D9SF70;G5E9L0;Q8N6H7-2	E9PIY6	ARFGAP2	ADP-ribosylation factor GTPase-activating protein 2	1	VSS(0.001)QS(0.998)FS(0.001)EIER	102.52	0.005381	17415000.0	716.48	517.17	835.69	675.41	660.47	573.04	437.74	719.36	557.93	613.33	True	False	684.9843970889285	602.6235521130536	660.2900893795635	616.1978539416742	747.3333816713402	683.7718698927082	535.9143379588501	694.0597010628705	531.9919560785488	502.2499937107854	1.3638315692709964	1.1998478041994105	1.3146642063668865	1.2268747867750185	1.4879709129507388	1.3614173787057327	1.0670270675353155	1.3819008656126264	1.0592174469690285	1.0	8.97226183066775	-9.866505362353484	5.45087027474376	1.0052604923617683	1.2951817422486784	0.494498722639665	0.10988572190528904	0.1717999784981204	7.141868868299605	0.10514096204227671	0.027449041690222116	1.359861372598264e-10	9.866505362353484	0.28992124988691015	
VSVHVIEGDHR	ddPTM_K562_Methotrexat_30min_R1	2	VSVHVIEGDHR	11	0	A0A0U1RQF0;P49327	A0A0U1RQF0	FASN	Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase	0	;	121.36	0.0012957	69430000.0	12083.599999999999	10585.3	13719.6	12392.3	10798.5	10352.0	9806.5	12173.5	12433.3	13806.400000000001	False	True	11552.419412494106	12334.340905664118	10840.04344942725	11305.886299286965	12218.692025342514	12352.377490453224	12005.857255890405	11745.351104994508	11855.278596797847	11305.927173248652	1.0218020367076739	1.0909623524595868	0.9587929661422422	0.9999963847315607	1.0807333037005216	1.0925576736139442	1.061908242633818	1.0388666869167167	1.0485896835466122	1.0	13.464791688613545	-7.7580787455220666	24.999984825039494	1.0580649687094659	1.0188868959807793	0.16820508058298467	0.03836635418385216	157.14992855692256	1169033.2847017692	0.011919342533392939	0.014737501937646221	1.745505632172664e-08	7.7580787455220666	-0.039178072728686564	
VT(ph)AAMVLT(ph)SLST(ph)SPLVR	ddPTM_K562_Methotrexat_30min_R1	1	VTAAMVLTSLSTSPLVR	17	0	E5RGL7;Q6ZNC4	E5RGL7	ZNF704	Zinc finger protein 704	3	VT(0.993)AAMVLT(0.992)S(0.034)LS(0.03)T(0.496)S(0.455)PLVR	40.756	0.033755	33689000.0	0.0	115.91	152.15	172.26	118.7	49.855	55.036	117.48	0.0	124.4	True	False	0.0	135.06215736686985	120.21579425277388	157.15823325090358	134.3111305651855	59.48877316330615	67.37922397748272	113.34816181170213	0.0	101.86995453935361	0.0	1.3258291709033176	1.1800907813925945	1.5427339097338206	1.3184567635523923	0.5839677992623911	0.6614239132840027	1.1126750995840913	0.0	1.0	6.670584796442996	-8.269957214128649	24.714044549788785	0.6780187032313562	1.1194436527484208	0.14699173273137034	0.47745539601493614	1014.9826112433984	2944908.7165146116	0.1653544643126689	0.14816574186146605	5.370847063338589e-09	8.269957214128649	0.4414249495170647	
VTAEADSS(ph)SPTGILATSESK	ddPTM_K562_Methotrexat_30min_R1	1	VTAEADSSSPTGILATSESK	20	0	A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3	A0MZ66-7	KIAA1598	Shootin-1	1	VTAEADS(0.087)S(0.524)S(0.387)PT(0.001)GILATSESK	150.68	2.2793e-26	0.0	497.5	308.45	712.55	438.98	437.56	563.56	232.05	364.34	493.92	851.3	True	False	475.63049568968006	359.41611974644974	562.9954925718964	400.49530496041854	495.1068095206621	672.459994061033	284.09311948497106	351.52595569012203	470.95776700718164	697.1213207343384	0.6822779357668436	0.5155718367182424	0.807600450347501	0.5744987178681353	0.7102161342578407	0.9646240533178249	0.40752321157773674	0.5042536287942381	0.6755750441129543	1.0	9.44526594140742	-12.655907214759441	2.239979633627582	1.0597499634746579	0.6473738190151112	0.3222488047772717	0.15263593292649666	2671165.595551837	1880983.1036643905	912589.7231895057	0.04086639641578077	2.208476514598565e-13	12.655907214759441	-0.41237614445954673	
VTAGWPSEPGQGDLNPES(ph)PAALGQDLLEPR	ddPTM_K562_Methotrexat_30min_R1	2	VTAGWPSEPGQGDLNPESPAALGQDLLEPR	30	0	A0A087X055;Q92766-4;Q92766;Q92766-2;Q92766-5;Q92766-3	A0A087X055	RREB1	Ras-responsive element-binding protein 1	1	VTAGWPS(0.001)EPGQGDLNPES(0.999)PAALGQDLLEPR;VTAGWPSEPGQGDLNPES(1)PAALGQDLLEPR	134.25	9.4059e-19	62111000.0	5685.700000000001	4781.6	6502.8	5727.0	4928.3	5225.6	4442.8	5061.5	5507.9	6410.5	True	False	5435.763435864952	5571.67812669679	5137.951146019963	5224.922801741117	5576.457832893042	6235.37324324888	5439.2109943884025	4883.484176114491	5251.838931201116	5249.49633098494	1.035482852665422	1.0613738491081868	0.9787512595624487	0.9953188786705538	1.0622843566873692	1.1878040958796068	1.0361395934851272	0.9302767100321458	1.0004462523770803	1.0	12.357963293031636	-9.022750418725597	23.730397415182658	0.9758584755244454	1.0535298944255373	0.27722866410982216	0.05544263795508628	580.1375518087535	605123.2693985207	0.028325033476735182	0.016533218501920514	9.489636590779943e-10	9.022750418725597	0.07767141890109197	
VTFGEDLS(ph)PEVFDESLPANTPLRK	ddPTM_K562_Methotrexat_30min_R1	2	VTFGEDLSPEVFDESLPANTPLRK	24	1	E9PEI0;Q69YH5	E9PEI0	CDCA2	Cell division cycle-associated protein 2	1	VT(0.001)FGEDLS(0.999)PEVFDESLPANTPLRK;VT(0.004)FGEDLS(0.996)PEVFDESLPANTPLRK	120.92	1.1765999999999998e-09	15540900.0	2359.7	1848.93	3331.5	2469.9	1806.17	1536.15	1668.67	2328.68	2341.6	3357.2	True	False	2255.9704134250005	2154.434256063557	2632.2636776412496	2253.3677017671357	2043.7130134197216	1832.9892467117197	2042.9117245894713	2246.7790044916096	2232.7395270975385	2749.1785480668636	0.8205979982680021	0.7836647268975991	0.9574727983717809	0.8196512748695909	0.7433904265173307	0.6667407062377307	0.7430989616974798	0.8172546690615909	0.8121478791064811	1.0	11.42478489178422	-10.464144351245256	1.8269480470121497	0.9999488018709788	0.7923395110030854	0.43047864355475984	0.07072574655948076	3.446072195578735	12.287598844780446	0.07617890114245837	0.02132505122423016	3.434437747323876e-11	10.464144351245256	-0.20760929086789337	
VTGTEGSSSTLVDYTSTS(ph)STGGSPVRK	ddPTM_K562_Methotrexat_30min_R1	1	VTGTEGSSSTLVDYTSTSSTGGSPVRK	27	1	A0A2R8Y880;Q7Z6E9-2;Q7Z6E9	A0A2R8Y880	RBBP6	E3 ubiquitin-protein ligase RBBP6	1	VTGTEGSSSTLVDY(0.001)T(0.011)S(0.031)T(0.088)S(0.517)S(0.161)T(0.161)GGS(0.029)PVRK	69.197	0.00033719	13951000.0	629.72	369.8	749.48	543.95	464.46	384.61	465.92	511.5	691.29	951.3	True	False	602.038262805438	430.9031644747519	592.1743902502067	496.2627480368574	525.5446310219548	458.9304392004651	570.4144202992358	493.5102550790403	659.1520787868369	779.010351714526	0.7728244707922177	0.5531417695880112	0.760162414975473	0.6370425591195693	0.6746311263583112	0.5891198213096962	0.7322295769803432	0.633509238988766	0.8461403334835119	1.0	9.605498689137388	-9.9718433291093	3.2937473421998926	0.9990608444335629	0.6668742062123961	0.7125564263749293	0.06787097291685	0.10032429200592788	2.511454789269128	0.0591868982353577	0.01576016759655494	1.0669809631203656e-10	9.9718433291093	-0.3321866382211668	
VTIPPPSSSVAISNHVT(ph)PPPIPK	ddPTM_K562_Methotrexat_30min_R1	2	VTIPPPSSSVAISNHVTPPPIPK	23	0	A0A1W2PRW5;F5H2U7;A0A1W2PNT6;F5GYH1;A0A1W2PRM0;A0A1W2PRL5;A0A1W2PR09;Q8NC96	A0A1W2PRW5	NECAP1	Adaptin ear-binding coat-associated protein 1	1	VTIPPPS(0.008)S(0.003)S(0.004)VAIS(0.226)NHVT(0.76)PPPIPK;VTIPPPS(0.001)S(0.001)S(0.001)VAIS(0.03)NHVT(0.967)PPPIPK	67.655	0.011375	65811000.0	6889.700000000001	4684.4	8125.9	6729.799999999999	5150.4	4675.8	4417.299999999999	6081.4	6439.1	8610.2	True	False	6586.837037493844	5458.417478814294	6420.384636993854	6139.808882688559	5827.767875846097	5579.332174445632	5407.991970269175	5867.513715029666	6139.7476464527535	7050.809345456124	0.9341958794756965	0.7741547404528754	0.9105883200673203	0.8707949090476177	0.826538853954658	0.791303792385369	0.7670030070738392	0.8321759145013572	0.8707862240537674	1.0	12.783573155174672	-10.17779929296048	3.060615178279788	0.9999514577397034	0.8356424381358782	0.46234201232719774	0.0520957046906458	0.7762733084338013	11.713909937281244	0.05071597464917845	0.013510460715220125	6.640498868593012e-11	10.17779929296048	-0.16430901960382516	
VTKNEEPS(ph)EEEIDAPKPK	ddPTM_K562_Methotrexat_30min_R1	1	VTKNEEPSEEEIDAPKPK	18	2	Q9NR30;Q9NR30-2	Q9NR30	DDX21	Nucleolar RNA helicase 2	1	VTKNEEPS(1)EEEIDAPKPK	81.808	0.025710000000000004	17501000.0	3084.0	1661.6	6620.1	3573.7	1945.0	1271.8	1067.5	2079.0	2234.5	5094.3	True	False	2948.4310526773343	1936.151157629117	5230.631479019313	3260.3992695271927	2200.8015918221217	1517.5573504983001	1306.9140489127622	2005.8803916115826	2130.618582720983	4171.672905223706	0.7067742653038193	0.4641186405589704	1.2538450635642107	0.7815567863541194	0.5275585219220594	0.36377668742869024	0.31328296311924747	0.4808335737684154	0.5107348133773993	1.0	12.026410327344408	-7.773084837491697	4.912310193536821	0.48450826801169466	0.8123546139872174	0.2017386116679123	0.2526386703877595	0.25563080212868217	16.294745034936113	0.07789687686489766	0.09391524464197891	1.686223596948239e-08	7.773084837491697	0.32784634597552276	
VTLTSEEEAR	ddPTM_K562_Methotrexat_30min_R1	2	VTLTSEEEAR	10	0	P00338-4;P00338;P00338-3	P00338-4	LDHA	L-lactate dehydrogenase A chain	0	;	144.65	3.4669e-06	42672000.0	1957.0900000000001	1289.35	2116.88	2076.88	1441.6	1534.23	1619.94	1824.69	1947.12	1938.29	False	True	1871.058666953398	1502.3931722972445	1672.5758168768443	1894.803154964222	1631.1956682626067	1830.6982338850505	1983.2527816353552	1760.5146184558632	1856.598816194977	1587.246898585882	1.1788075746882045	0.9465403105438506	1.0537590707324638	1.193767117549481	1.0276886788790576	1.1533796257633675	1.2494923023017306	1.1091624245883547	1.169697554834769	1.0	10.632310843623053	-7.157103544517044	8.362421422468161	1.135309810831534	1.047531825634421	0.11005538984579699	0.08716937832243242	0.552867143278393	40.140773595893435	0.02283780773813523	0.03970948136485397	6.964604441724858e-08	7.157103544517044	-0.087777985197113	
VTLYNTDQDGSDS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	VTLYNTDQDGSDSPR	15	0	C9JXI1;C9JVP0;Q9UPW0-2;Q9UPW0	C9JXI1	FOXJ3	Forkhead box protein J3	1	VTLYNTDQDGSDS(1)PR	283.22	5.592299999999998e-145	18070000.0	1628.4	1116.9	1869.8	1054.3	1273.7	1322.6	1203.4	1782.4	1686.1	1627.9	True	False	1556.8174857911044	1301.448740946053	1477.3545323288636	961.8711559063485	1441.2138753233091	1578.1737315372318	1473.2930833364114	1719.7119817260632	1607.7135790225313	1333.0715353264775	1.1678424184564336	0.9762782464838394	1.108233499237571	0.7215450412199974	1.0811226833152259	1.1838627483338524	1.1051868142811951	1.2900372831866784	1.206021984880798	1.0	10.380538485112716	-7.998710148812544	24.999616171758927	1.1675297999325456	0.9880548303924228	0.260751476424656	0.1290899003040423	55.202894458665774	1069890.7367307323	0.0398565337643599	0.04485219605978655	1.0029744069125582e-08	7.998710148812544	-0.17947496954012276	
VTNDIS(ph)PES(ph)SPGVGR	ddPTM_K562_Methotrexat_30min_R1	1	VTNDISPESSPGVGR	15	0	A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154-4;Q15154-2;Q15154;E5RGQ4;E9PGW9;E7EV93;Q15154-3	A0A5H1ZRS1	PCM1	Pericentriolar material 1 protein	2	VT(0.001)NDIS(0.999)PES(0.585)S(0.415)PGVGR	125.41	0.00084001	66290000.0	4893.8	4328.9	5518.3	5290.3	3628.8	3730.2	3693.1	4942.6	4405.1	5731.5	True	False	4678.674411670666	5044.177146281103	4360.0842420314275	4826.507612720627	4106.0508053491585	4451.008357311495	4521.371685283112	4768.765956507649	4200.307862494607	4693.469810629459	0.9968476629112889	1.0747224015071717	0.9289682085856817	1.0283452983525903	0.8748433400061607	0.9483406811802958	0.963332431593234	1.0160427463936519	0.8949259358144861	1.0	12.196439164278422	-6.766289389062388	24.99982861025406	0.956975013325686	1.035785035696715	0.28539986415581053	0.04996114725052689	131.3168650893746	676897.8042982651	0.012448919022946293	0.027302916309742103	1.712815604580256e-07	6.766289389062388	0.07881002237102908	
VTNDIS(ph)PESS(ph)PGVGR	ddPTM_K562_Methotrexat_30min_R1	3	VTNDISPESSPGVGR	15	0	A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154-4;Q15154-2;Q15154;E5RGQ4;E9PGW9;E7EV93;Q15154-3	A0A5H1ZRS1	PCM1	Pericentriolar material 1 protein	2	VT(0.002)NDIS(1)PES(0.205)S(0.793)PGVGR;VTNDIS(0.999)PES(0.26)S(0.74)PGVGR;VT(0.309)NDIS(0.998)PES(0.215)S(0.478)PGVGR	127.3	0.0006821	188381000.0	10664.6	10409.8	13768.3	11746.6	11008.1	10499.8	9702.3	11736.900000000001	11714.800000000001	13780.199999999999	True	False	10195.796953431476	12129.842513654059	10878.521984952124	10716.793815773039	12455.858099196446	12528.737748672796	11878.287753411043	11324.106574461757	11170.181504971919	11284.472247131827	0.9035244830366738	1.074914470788574	0.964025764493959	0.9496938431034667	1.103805107266966	1.1102635085001182	1.052622355150915	1.0035122889632702	0.9898718575705694	1.0	13.462051327609572	-7.74706635833421	24.99959511202307	1.0473311840905775	0.9796725662084111	0.2743975246525714	0.055364970533769334	354.9289997510501	617340.5184208544	0.017047158899669738	0.021900531108417973	1.7903322780415945e-08	7.74706635833421	-0.06765861788216632	
VTNDIS(ph)PESSPGVGRR	ddPTM_K562_Methotrexat_30min_R1	3	VTNDISPESSPGVGRR	16	1	A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154-4;Q15154-2;Q15154;E5RGQ4;E9PGW9;E7EV93;Q15154-3	A0A5H1ZRS1	PCM1	Pericentriolar material 1 protein	1	VTNDIS(1)PESSPGVGRR;VTNDIS(0.899)PES(0.087)S(0.013)PGVGRR;VTNDIS(0.607)PES(0.391)S(0.003)PGVGRR	171.52	2.2890999999999997e-11	141704000.0	5391.7	5140.0	6471.4	6125.6	4744.2	4562.26	4528.0	4760.7	5151.7	5853.200000000001	True	False	5154.687323839295	5989.297634938411	5113.141576913579	5588.578158607543	5368.145456001292	5443.852176351922	5543.519263210294	4593.263482609555	4912.198591453874	4793.128761332349	1.0754326830156848	1.2495590945221262	1.0667649110874868	1.1659561920581665	1.119966878275372	1.1357617221279677	1.156555464967179	0.9583017088263579	1.0248417758108435	1.0	12.22675198131424	-9.25688069659366	24.999883482287864	0.9936788030994029	1.140307681748038	0.6341799538253763	0.05017176264540954	219.71439598163852	1204925.676362867	0.022643931400317972	0.012513237634077497	5.535021388271856e-10	9.25688069659366	0.14662887864863505	
VTNDISPES(ph)SPGVGR	ddPTM_K562_Methotrexat_30min_R1	4	VTNDISPESSPGVGR	15	0	A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154-4;Q15154-2;Q15154;E5RGQ4;E9PGW9;E7EV93;Q15154-3	A0A5H1ZRS1	PCM1	Pericentriolar material 1 protein	1	VTNDIS(0.087)PES(0.713)S(0.199)PGVGR;VTNDIS(0.001)PES(0.998)SPGVGR;VT(0.005)NDIS(0.003)PES(0.981)S(0.011)PGVGR;VT(0.101)NDISPES(0.898)SPGVGR	228.49	6.4014e-37	1681330000.0	12888.7	11127.599999999999	16369.400000000001	14481.400000000001	12303.3	11829.2	10899.699999999999	13063.3	12449.499999999998	14581.2	True	False	12322.128180493628	12966.246763140205	12933.686641086802	13211.838145823962	13921.39960137023	14115.025483971142	13344.23518401352	12603.856334651071	11870.725462333787	11940.403385283134	1.0319691707971088	1.0859136282716755	1.0831867420013561	1.1064817259111954	1.1659069758504748	1.1821230010845603	1.1175698804665717	1.0555636964648665	0.9941645252089869	1.0	13.543563955860472	-9.527758405260407	2.8774141194919176	0.9973085705115396	1.1129145514564995	0.5637299081734517	0.03995196336701786	0.22371330117367236	3.6065863928144792	0.03552060903644094	0.012256178081867585	2.966481161665144e-10	9.527758405260407	0.11560598094495989	
VTNDISPESS(ph)PGVGRR	ddPTM_K562_Methotrexat_30min_R1	1	VTNDISPESSPGVGRR	16	1	A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154-4;Q15154-2;Q15154;E5RGQ4;E9PGW9;E7EV93;Q15154-3	A0A5H1ZRS1	PCM1	Pericentriolar material 1 protein	1	VTNDIS(0.022)PES(0.336)S(0.641)PGVGRR	143.99	2.3092e-09	47779000.0	3723.0	3206.0	4763.0	3792.9	3280.8	3399.5	3203.2	3586.2	3440.7	3529.7	True	False	3559.3413777943288	3735.7370073176135	3763.311390246218	3460.382345857147	3712.2827056298274	4056.405262634825	3921.5991395572464	3460.0713133224895	3280.742607996455	2890.437126507686	1.231419754871068	1.29244707420128	1.3019869402221402	1.1971830537750137	1.284332626226373	1.403388167635356	1.3567495046313087	1.197075446336746	1.1350333753705786	1.0	11.497071975504301	-9.855800124866704	1.8273396000910578	1.0075020018565273	1.294095109203498	0.7280739376571068	0.05742088477704007	0.1782479312117532	1.250948228674708	0.059152467405298094	0.017119456852161086	1.3937981223732113e-10	9.855800124866704	0.28659310734697074	
VTPTEEHVEGPLPSPVTNGTSPAQLNGGS(ph)ACSSR	ddPTM_K562_Methotrexat_30min_R1	1	VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSR	34	0	H3BUQ9;H3BN50;H3BQS0;Q15599-3;Q15599-2;Q15599	H3BUQ9	SLC9A3R2	Na(+)/H(+) exchange regulatory cofactor NHE-RF2	1	VTPTEEHVEGPLPSPVT(0.004)NGT(0.003)S(0.001)PAQLNGGS(0.888)ACS(0.06)S(0.044)R	132.7	4.9883000000000005e-25	11535000.0	400.83	297.89	348.53	434.77	433.16	330.88	422.23	473.81	201.56	196.31	True	False	383.2099931402903	347.11125923575946	275.37831594426063	396.65438912397167	490.12813239777404	394.8178771291696	516.9258256416261	457.1458337419357	192.18951959420053	160.75635671720656	2.383793717186634	2.159238155952849	1.7130166518310097	2.467425843829887	3.048888034082407	2.4560016486546203	3.2155855992119347	2.8437185507141134	1.1955329389076004	1.0	7.3287319763050505	-7.4242362727209725	24.862421892327312	2.4686787921549267	2.092313520404881	0.0	0.7103908475534555	139.28686653226555	35087.323310818865	0.19604037221524778	0.2907747634221625	3.7649891352328924e-08	7.4242362727209725	-0.37636527175004586	
VTPTKESYTEEIVS(ph)EAESHVSGISR	ddPTM_K562_Methotrexat_30min_R1	4	VTPTKESYTEEIVSEAESHVSGISR	25	1	Q5QJE6;J3KP30;E9PRB3	Q5QJE6	DNTTIP2	Deoxynucleotidyltransferase terminal-interacting protein 2	1	VTPT(0.007)KES(0.009)Y(0.003)T(0.011)EEIVS(0.929)EAES(0.035)HVS(0.004)GIS(0.002)R;VTPTKESYTEEIVS(0.995)EAES(0.005)HVSGISR;VTPTKESYTEEIVS(0.943)EAES(0.048)HVS(0.004)GIS(0.004)R;VTPTKESYTEEIVS(0.796)EAES(0.195)HVS(0.005)GIS(0.003)R	103.42	4.0164e-07	37093600.0	9035.9	5301.01	7584.8	10276.2	4957.1900000000005	5118.9400000000005	5046.84	5848.03	7196.91	9844.1	True	False	8638.692655281166	6176.911800736356	5992.854132424838	9375.301500829768	5609.147374274912	6108.10270778406	6178.722340622847	5642.351470205043	6862.327224958807	8061.23809872067	1.0716334822875582	0.7662485247417069	0.7434160930410817	1.1630101215243402	0.6958171071966094	0.757712727621012	0.7664731229813717	0.6999360893583447	0.8512745983830782	1.0	12.976785719160894														
VTQEVIDY(ph)RR	ddPTM_K562_Methotrexat_30min_R1	1	VTQEVIDYRR	10	1	A0A0X1KG68;Q5XG87-2;Q5XG87	A0A0X1KG68	PAPD7	Non-canonical poly(A) RNA polymerase PAPD7	1	VTQEVIDY(1)RR	59.35	0.031786	0.0	1386.8	1069.2	901.58	1034.5	988.21	692.86	1066.3	1031.6	1461.9	1339.4	True	False	1325.837932507434	1245.8671267074212	712.35067881969	943.806991164865	1118.1769362748278	826.7453891069769	1305.4449183659758	995.3180432835542	1393.9365880867317	1096.8216809486353	1.2087998947656868	1.1358884934056712	0.6494680869214599	0.8604926466703059	1.01947012508699	0.7537646305386023	1.1902070692447504	0.9074565725421373	1.2708871572278944	1.0	10.099113279024548	-8.780311035673856	24.999387226282604	1.084425698261798	0.9340440683007128	0.14784624678775815	0.18078356956212896	535.2314297434375	709017.1347376588	0.07745766148614504	0.05231981249486528	1.6583987598709123e-09	8.780311035673856	-0.15038162996108506	
VTQHES(ph)DNENEIQIQNK	ddPTM_K562_Methotrexat_30min_R1	4	VTQHESDNENEIQIQNK	17	0	Q5VZL5-2;Q5VZL5-4;Q5VZL5	Q5VZL5-2	ZMYM4	Zinc finger MYM-type protein 4	1	VT(0.057)QHES(0.943)DNENEIQIQNK;VT(0.078)QHES(0.922)DNENEIQIQNK;VT(0.015)QHES(0.985)DNENEIQIQNK;VTQHES(1)DNENEIQIQNK	214.81	8.314999999999998e-165	126946000.0	14805.599999999999	10526.7	20212.0	15726.8	9421.36	9835.33	8885.16	11785.2	12666.900000000001	16632.9	True	False	14154.76355172487	12266.058251693808	15969.7774133228	14348.055861432204	10660.433976930208	11735.868325268477	10877.883307576321	11370.707836085048	12078.018583785368	13620.520633903649	1.039223384493204	0.9005572240140096	1.1724792203296162	1.0534146415605878	0.7826744853199434	0.8616314046069596	0.7986393178319142	0.8348218208180341	0.886751608724945	1.0	13.733494229859442	-7.751343762601062	24.99624421597111	0.8494324221467815	1.040718608446228	0.5305528065388136	0.08284424306670962	154.5596448989802	382680.2264996527	0.024206162904565683	0.030884985735753188	1.7727856899168016e-08	7.751343762601062	0.1912861862994466	
VTRS(ph)PPETAAPVEDMAR	ddPTM_K562_Methotrexat_30min_R1	1	VTRSPPETAAPVEDMAR	17	1	Q9Y3L3;A0A2R8Y5V0;Q6ZT62-2;Q6ZT62;A0A3B3IU28	Q9Y3L3	SH3BP1	SH3 domain-binding protein 1	1	VT(0.071)RS(0.874)PPET(0.055)AAPVEDMAR	115.91	0.00087156	57814000.0	2998.4	1996.3	3572.3	3283.9	2467.4	2669.9	2558.4	2628.2	2481.2	3229.1	True	False	2866.5939261827875	2326.1546437018565	2822.5230483679543	2996.005585583667	2791.9063484122894	3185.820388500873	3132.1863257502673	2535.7647163220577	2365.849553567823	2644.278699381242	1.084074052728847	0.8796934469298466	1.0674075501301816	1.1330143022687922	1.055829080749163	1.2047975083890934	1.1845144486786492	0.958962728442892	0.8947050680102022	1.0	11.368658525435652	-9.412141113178054	7.807397345059638	0.9407247391180215	1.0832354158106257	0.3381505359003705	0.08694527693701457	0.3432618075420967	21.495863250895518	0.052447292808729284	0.024971484862254218	3.871318356329381e-10	9.412141113178054	0.1425106766926042	
VTS(ph)GGVSESPSGFSK	ddPTM_K562_Methotrexat_30min_R1	2	VTSGGVSESPSGFSK	15	0	E7EPP6;O14757-2;O14757-3;O14757	E7EPP6	CHEK1	Serine/threonine-protein kinase Chk1	1	VT(0.1)S(0.9)GGVSESPSGFSK;VT(0.006)S(0.994)GGVSESPSGFSK	204.23	3.2763000000000004e-13	69701000.0	5962.5	4363.6	8304.6	6867.6	4154.8	4123.5	3739.8	5131.2	5119.5	6819.5	True	False	5700.3956392959135	5084.6107314819565	6561.5779490738505	6265.528170636856	4701.229025039869	4920.308016024332	4578.54534906225	4950.732787608153	4881.495562425632	5584.422467693902	1.0207672632708074	0.9104989389496629	1.1749787891286576	1.1219652894964836	0.8418469505551665	0.8810773261672988	0.819878040307536	0.8865254762239662	0.8741271976941699	1.0	12.447192371802771	-7.768059989431422	24.99957989530137	0.8748922729222495	1.0550077604019827	0.5399328536123871	0.07802325328743694	121.10800588245223	457305.9377897125	0.024827180848195032	0.02880195713465122	1.7058467428035133e-08	7.768059989431422	0.18011548747973327	
VTSLRS(ph)PGASVSSSLTSLCSSSSDPAPSDR	ddPTM_K562_Methotrexat_30min_R1	1	VTSLRSPGASVSSSLTSLCSSSSDPAPSDR	30	1	Q9P206;Q9P206-3;Q9P206-2	Q9P206	KIAA1522	Uncharacterized protein KIAA1522	1	VT(0.144)S(0.144)LRS(0.353)PGAS(0.069)VS(0.051)S(0.149)S(0.062)LT(0.022)S(0.004)LCSSSSDPAPSDR	44.215	0.024285	15204000.0	901.84	651.43	878.15	714.08	664.72	376.82	856.86	892.77	561.94	928.0	True	False	862.1961934327262	759.0677350832541	693.8383156297953	651.4777150807228	752.1423311650389	449.63513195059704	1049.0326669333867	861.3707730731464	535.8155320538058	759.9302074961428	1.1345728659392744	0.9988650636540289	0.9130289976442567	0.8572862463610246	0.9897518531908821	0.5916795088750032	1.3804329089506702	1.1334866867725066	0.7050851864663183	1.0	9.569723116327328	-11.31116905815459	15.778562468806136	0.9999999483299672	0.9699147482657053	0.00198961731642755	0.21277749592299375	0.0	0.0	0.20510904799852225	0.04974625115692883	4.884621782729031e-12	11.31116905815459	-0.030085200064261852	
VTSSMSS(ph)PSMQPK	ddPTM_K562_Methotrexat_30min_R1	1	VTSSMSSPSMQPK	13	0	A0A2R8Y7R9;Q13136-2;Q13136	A0A2R8Y7R9	PPFIA1	Liprin-alpha-1	1	VTS(0.001)S(0.007)MS(0.043)S(0.474)PS(0.474)MQPK	84.605	0.0078006	0.0	3057.7	2291.0	4327.0	3439.2	2629.3	2245.1	1992.3	3153.8	2715.9	4065.6	True	False	2923.2871691866007	2669.548809658346	3418.82183195368	3137.6906757024694	2975.099036184011	2678.9338006005137	2439.1239903034175	3042.879066409144	2589.638401795442	3329.2804435305143	0.8780537472795832	0.8018395731263299	1.02689511741108	0.9424531002786672	0.8936162292861956	0.804658497846356	0.7326279752260413	0.9139749919001543	0.7778372671571268	1.0	11.700994686365748	-8.107393225679617	5.314228456921801	0.8337990976947998	0.9132010510323104	0.10998540150631808	0.08702096611510123	0.4453783326269809	18.294965086547037	0.028819922708438014	0.02900354674164168	7.809204112553077e-09	8.107393225679617	0.07940195333751066	
VTSSVPLPSGST(ph)SSPGRGR	ddPTM_K562_Methotrexat_30min_R1	1	VTSSVPLPSGSTSSPGRGR	19	1	Q15036-2;Q15036	Q15036-2	SNX17	Sorting nexin-17	1	VTSSVPLPS(0.005)GS(0.088)T(0.302)S(0.302)S(0.302)PGRGR	90.06	0.015065	53423000.0	1849.3	1773.5	2162.4	2031.5	1651.7	1623.5	1651.3	1808.6	1746.4	1978.0	True	False	1768.0069862892972	2066.540730654332	1708.5417909444504	1853.4015491072262	1868.9275008805134	1937.218397966655	2021.646059924726	1744.9905128757612	1665.2102451841226	1619.765032788113	1.091520652996203	1.2758274742461755	1.0548084174922119	1.144240992730256	1.1538263038457592	1.1959872936830271	1.2481106944535358	1.0773108923533783	1.0280566696255842	1.0	10.661568831958865	-9.49719685630197	4.909521300292419	1.022975818767224	1.1663463571033401	0.49751467071422184	0.062384590115658556	0.15745467421539722	10.171949020392033	0.03882126984963578	0.01622641320505597	3.1827545208768197e-10	9.49719685630197	0.14337053833611613	
VTSSVPLPSGSTS(ph)SPGRGR	ddPTM_K562_Methotrexat_30min_R1	2	VTSSVPLPSGSTSSPGRGR	19	1	Q15036-2;Q15036	Q15036-2	SNX17	Sorting nexin-17	1	VTSSVPLPS(0.137)GS(0.107)T(0.107)S(0.325)S(0.325)PGRGR;VTSSVPLPS(0.003)GS(0.016)T(0.054)S(0.463)S(0.463)PGRGR	158.99	1.122e-14	46502000.0	2929.3	2828.3	3381.7	3385.9	2385.5	2535.8	2431.2	3087.3	2805.4	3303.6	True	False	2800.531479444782	3295.628502119905	2671.927383664839	3089.0634039488823	2699.235062874893	3025.8074613882627	2976.458487790827	2978.717909101703	2674.9775663304745	2705.2860274614827	1.0352071651634829	1.2182181361474642	0.9876690880527905	1.1418620332902538	0.997763281026418	1.1184796840974123	1.1002379998183778	1.1010731874059159	0.9887965779502257	1.0	11.40156542162911	-9.76387600462355	24.996090876597968	0.9943982349014956	1.088858735611358	0.24752286401273527	0.06494479549606093	84.39194114261507	865642.8072186394	0.049443649505606965	0.015114769572086408	1.7223602557065072e-10	9.76387600462355	0.09446050070986234	
VTSSVPLPSGSTSS(ph)PGR	ddPTM_K562_Methotrexat_30min_R1	4	VTSSVPLPSGSTSSPGR	17	0	Q15036-2;Q15036	Q15036-2	SNX17	Sorting nexin-17	1	VTSSVPLPSGS(0.001)T(0.001)S(0.028)S(0.969)PGR;VTSSVPLPSGSTS(0.001)S(0.999)PGR;VTSSVPLPSGST(0.011)S(0.036)S(0.952)PGR;VTSSVPLPSGST(0.002)S(0.054)S(0.944)PGR	239.19	1.1561999999999998e-52	595620000.0	15528.7	13107.0	19203.9	14536.8	14665.900000000001	13070.0	12240.6	16209.800000000001	15050.2	15191.1	True	False	14846.076941540374	15272.70896909295	15173.263826821192	13262.381313838006	16594.722912855545	15595.592523205534	14985.86614250263	15639.6921461979	14350.519486984706	12439.844585231298	1.1934294548314355	1.227725062355269	1.21973097998628	1.0661211418656493	1.333997607378227	1.2536806562455587	1.204666669251961	1.2572256863052367	1.1535931489065208	1.0	13.602680841101833	-10.078386240255679	4.685562896715458	1.000036892035286	1.2188244163120718	0.5243720253488752	0.0634353665503227	0.32548115866663085	17.120278251188267	0.0611609219132308	0.01596919785699398	8.348602041655867e-11	10.078386240255679	0.21878752427678583	
VVDNSALGNS(ph)PYHR	ddPTM_K562_Methotrexat_30min_R1	1	VVDNSALGNSPYHR	14	0	Q6P1L8	Q6P1L8	MRPL14	39S ribosomal protein L14, mitochondrial	1	VVDNSALGNS(1)PYHR	85.28	0.034231	0.0	390.5	355.56	442.12	330.32	254.49	311.14	420.12	272.88	380.86	364.77	True	False	373.3340875714976	414.31024651336617	349.3250539272846	301.3613584548851	287.9598956826796	371.2634015049859	514.3426044301918	263.2826557301436	363.15390172974395	298.70661830643087	1.2498353390633932	1.387013949882899	1.1694587013432904	1.0088874500454852	0.9640224823785905	1.2429031656878857	1.7218989232523427	0.8814088459869768	1.2157544542826275	1.0	8.222585392914183														
VVDRDSEEAEIIR	ddPTM_K562_Methotrexat_30min_R1	3	VVDRDSEEAEIIR	13	1	P09874	P09874	PARP1	Poly [ADP-ribose] polymerase 1	0	;;	190.35	9.1678e-05	52699000.0	4617.7	4474.1	5792.9	5173.299999999999	4427.700000000001	4056.3	4150.9	5236.3	5035.7	5330.5	False	True	4414.71143707786	5213.368978303102	4577.0494546624595	4719.764821066408	5010.020158411728	4840.122567090938	5081.84498888242	5052.136361036909	4801.591406134726	4365.094796398907	1.011366681135971	1.1943312164959166	1.0485567136911687	1.0812513911404844	1.1477460151712782	1.108824159118816	1.1642003727100756	1.1573944202093374	1.0999970516323991	1.0	12.091797269744651	-7.742932779903175	24.88361384996523	1.1232452547574592	1.0892432736851512	0.03284790278649807	0.061813528005034576	698.1778753955608	938753.3915825402	0.017264508117455023	0.02224926097840583	1.8074538620575327e-08	7.742932779903175	-0.03400198107230801	
VVDVEEQQLEES(ph)GPHDLTETSYLPR	ddPTM_K562_Methotrexat_30min_R1	2	VVDVEEQQLEESGPHDLTETSYLPR	25	0	P38398-8;P38398-4;P38398;P38398-7;K7EPC7;H0Y8B8;B7ZA85;E7EUM2;A0A2R8Y7V5;P38398-6;P38398-5;P38398-3	P38398-8	BRCA1	Breast cancer type 1 susceptibility protein	1	VVDVEEQQLEES(0.993)GPHDLT(0.005)ET(0.001)S(0.001)YLPR;VVDVEEQQLEES(1)GPHDLTETSYLPR	148.66	1.6509999999999999e-22	27874000.0	3175.2	2465.1	3122.6	3012.8	2172.3	2514.3	2456.6099999999997	3289.3	2822.5	3558.4	True	False	3035.622009877128	2872.415875464334	2467.208932853839	2748.6725016737614	2457.99552592041	3000.1528906729664	3007.5673271190462	3173.61345460701	2691.2825910628644	2913.9392783990015	1.0417588425332536	0.9857500795426727	0.8466919510448384	0.9432840697984475	0.8435301120176053	1.0295866193619974	1.0321310912049912	1.0891144774817274	0.9235891121731024	1.0	11.5087550990359	-8.309008562142502	24.96593849184299	1.02153188322573	0.9310427835952279	0.27269223658698893	0.06706366979755121	520.3573788789404	273099.59363966476	0.024031880545814725	0.021194171640550465	4.908981979689445e-09	8.309008562142502	-0.09048909963050222	
VVDYSQFQES(ph)DDADEDYGR	ddPTM_K562_Methotrexat_30min_R1	11	VVDYSQFQESDDADEDYGR	19	0	Q9H1E3	Q9H1E3	NUCKS1	Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1	1	VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(0.999)DDADEDY(0.001)GR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYS(0.001)QFQES(0.997)DDADEDY(0.002)GR;VVDYSQFQES(1)DDADEDYGR;VVDYS(0.005)QFQES(0.995)DDADEDYGR;VVDYS(0.004)QFQES(0.996)DDADEDYGR;VVDY(0.009)S(0.084)QFQES(0.907)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR	241.11	6.601499999999998e-70	538477840.0	20045.010000000002	17035.53	22236.9	19015.350000000002	18325.15	16207.2	17385.410000000003	20769.89	20995.16	19336.629999999997	True	False	19163.85536161728	19850.361778000464	17569.67857521857	17348.303788735448	20735.228426930145	19339.012023113748	21284.530749516092	20039.40119621428	20019.099594182255	15834.578931224276	1.2102535498325118	1.2536084391140612	1.1095766203528687	1.0955961547247872	1.309490357589633	1.2213152056085979	1.3441804068149252	1.2655468316052596	1.2642647260235322	1.0	13.950790883675172	-7.768438990251858	24.99870754453189	1.2522717434283825	1.1693063805193478	0.08473904022144851	0.09717249883613506	318.58784310219437	1137814.8285785108	0.02890649162031165	0.03347198628700285	1.7043587310461985e-08	7.768438990251858	-0.08296536290903478	
VVDYSQFQES(ph)DDADEDYGRDSGPPTK	ddPTM_K562_Methotrexat_30min_R1	4	VVDYSQFQESDDADEDYGRDSGPPTK	26	1	Q9H1E3	Q9H1E3	NUCKS1	Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1	1	VVDY(0.007)S(0.007)QFQES(0.905)DDADEDY(0.076)GRDS(0.004)GPPTK;VVDY(0.001)S(0.006)QFQES(0.993)DDADEDYGRDSGPPTK;VVDY(0.001)S(0.013)QFQES(0.985)DDADEDYGRDSGPPTK;VVDY(0.004)S(0.091)QFQES(0.903)DDADEDY(0.001)GRDS(0.001)GPPTK	108.94	3.4972e-08	729925000.0	6136.129999999999	4499.83	8404.95	6715.29	5111.79	4820.5199999999995	4465.5	4875.78	5882.6900000000005	7036.129999999999	True	False	5866.393072394607	5243.350423467883	6640.865855437734	6126.570951860333	5784.079984092754	5752.017266255753	5467.002047231796	4704.296053781586	5609.205025905975	5761.8186755062825	1.018149546658397	0.9100165622631569	1.152564186663547	1.0633050598944784	1.0038635906195912	0.9982989035576223	0.9488327132667739	0.8164602738679947	0.9735129378074541	1.0	12.49230854424629	-8.698168008190635	2.4411169140355784	0.9161224978775675	1.030324451934033	0.2725012005746338	0.07207767509036887	0.35235273127320454	4.28599600503523	0.033431525634517144	0.023189660241418778	2.0036967410074075e-09	8.698168008190635	0.1142019540564656	
VVDYSQFQES(ph)DDADEDYGRDSGPPTKK	ddPTM_K562_Methotrexat_30min_R1	1	VVDYSQFQESDDADEDYGRDSGPPTKK	27	2	Q9H1E3	Q9H1E3	NUCKS1	Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1	1	VVDY(0.001)S(0.013)QFQES(0.986)DDADEDYGRDSGPPTKK	56.68	0.002676	355060000.0	1862.0	1212.7	3040.7	2351.1	1018.1	983.76	972.21	1664.7	1760.7	2056.4	True	False	1780.1487094958484	1413.078062624477	2402.498623624117	2144.9827133182375	1151.997995184628	1173.8576970641673	1190.2528407433038	1606.151557439058	1678.8454413053619	1683.9660330765805	1.0571167556411714	0.8391369153941929	1.4266906674090025	1.273768396265919	0.6840981187013286	0.6970792011282716	0.7068152310463945	0.9537909470208513	0.9969592072104546	1.0	10.71764732306272	-7.76007492538668	24.998507804515317	0.823695669751585	1.1468547092377945	0.412932469733012	0.18010193512254058	38.5678061531037	706599.2902446013	0.05875207352296883	0.07174718545325878	1.737501045598808e-08	7.76007492538668	0.3231590394862095	
VVLDDKDYFLFR	ddPTM_K562_Methotrexat_30min_R1	2	VVLDDKDYFLFR	12	1	P61604;B8ZZ54	P61604	HSPE1	10 kDa heat shock protein, mitochondrial	0	;	144.17	3.4883999999999997e-08	30875000.0	5306.0	3270.7	5199.9	4464.0	3608.9	3104.8	3465.2	4920.6	5288.6	7917.6	False	True	5072.7545932250105	3811.127582605653	4108.5120508379805	4072.6480508071136	4083.5336065433685	3704.758658458187	4242.359308939114	4747.539708977373	5042.734140334837	6483.645916887343	0.7823922925853312	0.5878062484379609	0.6336731066909322	0.628141651011427	0.6298205760908954	0.5714005215504983	0.6543169326828042	0.7322330321296391	0.7777621117773414	1.0	12.662589589598479	-10.072988084588639	1.1249402877771009	0.9978357255424652	0.6343655009005305	0.7981633015234051	0.054944999947234126	0.23825933619523693	0.6640779733837158	0.05104796396215802	0.016271049931693808	8.453020367589465e-11	10.072988084588639	-0.3634702246419348	
VVLGDGVQLPPGDY(ph)S(ph)TTPGGTLFSTTPGGTRIIYDRK	ddPTM_K562_Methotrexat_30min_R1	1	VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK	37	2	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	2	VVLGDGVQLPPGDY(0.806)S(0.338)T(0.307)T(0.307)PGGT(0.057)LFS(0.057)T(0.056)T(0.056)PGGT(0.008)RIIY(0.007)DRK	63.805	7.8646e-05	36790000.0	2310.7	1911.8	3075.2	2800.3	1461.1	1552.1	1552.9	1676.6	1590.3	2656.2	True	False	2209.124394754058	2227.692454956275	2429.757545094513	2554.802046746229	1653.2602600572252	1852.0213584749272	1901.177355088178	1617.633027694074	1516.3673001124087	2175.136440895747	1.0156256652315172	1.024162168897729	1.1170598310117548	1.1745479495962703	0.7600719793818511	0.851450660130655	0.8740497006731452	0.743692670160918	0.6971366354783476	1.0	11.086890185131415	-7.766796083623752	24.999827144936134	0.8124198744625498	1.0811006413333684	0.6754215491153577	0.08877860310461085	76.56820214060488	357344.53794383793	0.02757233066648361	0.0321754972330007	1.7108184153302246e-08	7.766796083623752	0.26868076687081854	
VVLGDGVQLPPGDY(ph)STTPGGTLFST(ph)TPGGTRIIYDRK	ddPTM_K562_Methotrexat_30min_R1	1	VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK	37	2	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	2	VVLGDGVQLPPGDY(0.262)S(0.239)T(0.239)T(0.239)PGGT(0.227)LFS(0.227)T(0.268)T(0.268)PGGT(0.016)RIIY(0.015)DRK	61.526	0.00024495	32048000.0	2218.2	1654.2	2936.2	2629.5	1491.9	1603.1	1500.3	2018.7	2022.5	3115.7	True	False	2120.690583997684	1927.5284334076096	2319.931745547123	2398.975817562122	1688.1109999174405	1912.8763866833033	1836.7804661206715	1947.701176789947	1928.4744164480571	2551.41653824971	0.8311816405534836	0.75547383365709	0.909272049768327	0.9402525152587733	0.661636771028966	0.7497311230864523	0.7199061535364649	0.7633803213198909	0.7558446014350148	1.0	11.317082733822266	-5.891747699683565	16.626810228744215	0.7969801110190736	2.9892759523553587	0.0	0.10265868950088596	687.8080505137285	109250.19704900566	0.02496923277880127	1940.1515677041423	1.2830757599962855e-06	5.891747699683565	2.192295841336285	
VVLGDGVQLPPGDYS(ph)T(ph)TPGGTLFSTTPGGTR	ddPTM_K562_Methotrexat_30min_R1	1	VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR	31	0	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	2	VVLGDGVQLPPGDY(0.334)S(0.338)T(0.338)T(0.323)PGGT(0.196)LFS(0.155)T(0.138)T(0.138)PGGT(0.041)R	61.732	0.00086782	27805000.0	2683.4	1803.5	2663.0	2195.7	2486.9	2037.6	2041.7	2590.7	2680.3	2723.5	True	False	2565.4409490124353	2101.4977207415222	2104.0726920482202	2003.2063900441706	2813.970940206908	2431.3373623017283	2499.6031978128203	2499.583612577261	2555.693438025084	2230.247758745415	1.1502941495861325	0.9422709707928061	0.9434255381706236	0.8981990373890287	1.2617301952989544	1.0901646925852904	1.1207737741294386	1.1207649924882588	1.1459235540103143	1.0	11.1229882730402	-7.748132840176185	24.999925608937495	1.1274887737361665	0.977733268092697	0.3842762626795453	0.0863915492505029	229.89550481769118	431918.8510243088	0.024949485858921025	0.03202188294038424	1.7859412150824282e-08	7.748132840176185	-0.1497555056434695	
VVLGDGVQLPPGDYS(ph)T(ph)TPGGTLFSTTPGGTRIIYDRK	ddPTM_K562_Methotrexat_30min_R1	1	VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK	37	2	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	2	VVLGDGVQLPPGDY(0.316)S(0.341)T(0.302)T(0.276)PGGT(0.19)LFS(0.19)T(0.19)T(0.19)PGGT(0.002)RIIY(0.002)DRK	64.152	0.00024314	27118000.0	2725.7	2229.3	3877.9	3654.6	2259.7	2061.4	2191.1	2566.4	2858.0	4187.0	True	False	2605.881491661027	2597.6539333790283	3063.9817846390515	3334.2068921325435	2556.8901578614127	2459.736375465636	2682.509950887826	2476.1382573506326	2725.1322038113967	3428.693727140463	0.760021658112443	0.7576220392089312	0.8936294777178648	0.9724423227831662	0.7457330287689078	0.71739751964287	0.7823708281827331	0.7221812312223456	0.7948018751981566	1.0	11.743443323940058														
VVLGDGVQLPPGDYS(ph)TTPGGT(ph)LFSTTPGGTR	ddPTM_K562_Methotrexat_30min_R1	1	VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR	31	0	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	2	VVLGDGVQLPPGDY(0.25)S(0.265)T(0.265)T(0.268)PGGT(0.251)LFS(0.222)T(0.222)T(0.222)PGGT(0.034)R	51.843999999999994	0.0072488	8325700.0	1110.4	768.22	1040.5	963.42	858.92	964.97	632.62	942.22	1132.0	1103.2	True	False	1061.5881455554186	895.1552974926815	822.1132692738166	878.958464406046	971.8830350888718	1151.4367954948457	774.501138757088	909.0815885446202	1079.3735670799515	903.3997897734312	1.17510337900528	0.9908739271648299	0.9100215414927195	0.9729451726200701	1.0758061337745228	1.2745595123324316	0.8573182632147055	1.0062893514427471	1.194790589170553	1.0	9.819220767826373	-6.251400758796568	23.525415537146223	1.0295235466550017	1.1751035601104267	0.11735943764532386	0.11812690816227876	1429.2585973804737	3349295.255575797	0.030135045651937968	0.37598162242810307	5.605304902903595e-07	6.251400758796568	0.14558001345542504	
VVLGDGVQLPPGDYS(ph)TTPGGTLFS(ph)TTPGGTRIIYDRK	ddPTM_K562_Methotrexat_30min_R1	1	VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRK	37	2	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	2	VVLGDGVQLPPGDY(0.185)S(0.204)T(0.204)T(0.204)PGGT(0.204)LFS(0.803)T(0.159)T(0.033)PGGT(0.001)RIIY(0.001)DRK	77.31	1.7211e-08	30884000.0	2306.3	1319.1	2615.0	2457.0	1543.7	1361.5	1510.1	1833.1	2070.1	2530.2	True	False	2204.9178134856475	1537.0588541337079	2066.147236089409	2241.598624738593	1746.7236078641697	1624.5906059942104	1848.7783655861	1768.6288339890293	1973.8615028376391	2071.95626186071	1.0641719876391271	0.7418394308928895	0.9971963569510467	1.0818754555781678	0.8430311199211962	0.7840853766552267	0.8922863863573133	0.8536033634227013	0.9526559701916789	1.0	11.016777833312682														
VVLGDGVQLPPGDYSTT(ph)PGGTLFS(ph)TTPGGTR	ddPTM_K562_Methotrexat_30min_R1	1	VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR	31	0	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	2	VVLGDGVQLPPGDY(0.123)S(0.14)T(0.14)T(0.571)PGGT(0.122)LFS(0.293)T(0.293)T(0.293)PGGT(0.027)R	67.586	0.00011541	5029400.0	974.87	647.24	725.93	931.75	563.7	661.72	734.86	835.5	711.59	806.66	True	False	932.0158820763785	754.1854088010768	573.5672134204146	850.0649241351991	637.8364304936399	789.5880248244499	899.6710613433562	806.1149914340917	678.5083362176879	660.5660573047822	1.410935169571316	1.1417259492234235	0.8682965270130029	1.2868734545695601	0.9655906830818966	1.1953203106531063	1.361969861143277	1.2203397109490806	1.0271619752702903	1.0	9.367559029491774	-9.833585384657168	6.376320718810939	1.006164652801625	1.1722682222597443	0.15355690599202065	0.15660089171122824	0.45522266906669756	30.35874094378822	0.15245747168849424	0.039843364804344375	1.4669476486683066e-10	9.833585384657168	0.16610356945811922	
VVLGDGVQLPPGDYSTT(ph)PGGTLFSTT(ph)PGGTR	ddPTM_K562_Methotrexat_30min_R1	1	VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR	31	0	Q13541	Q13541	EIF4EBP1	Eukaryotic translation initiation factor 4E-binding protein 1	2	VVLGDGVQLPPGDY(0.009)S(0.014)T(0.104)T(0.873)PGGT(0.018)LFS(0.122)T(0.106)T(0.687)PGGT(0.066)R	96.28399999999999	1.6316e-09	46505000.0	4293.9	3636.4	4672.0	4215.2	4164.2	3520.8	3687.4	4570.8	5102.4	4770.0	True	False	4105.145297370686	4237.253291768491	3691.4110466576376	3845.6599605201936	4711.865289802407	4201.144770902985	4514.393315185876	4410.042373245897	4865.1905376932355	3906.106777754958	1.0509557293080776	1.0847766159131627	0.9450358775853237	0.9845250474003924	1.2062817423825163	1.0755324956368963	1.1557270632986978	1.1290122426659766	1.245534445038779	1.0	11.93151567209263	-7.751376512002503	24.999273059607482	1.1398267915436482	1.0161208639948778	0.39623887155376636	0.07184977796368414	205.12762934978917	509598.01177366707	0.020770754751852024	0.026500398340614337	1.7726520122310647e-08	7.751376512002503	-0.12370592754877041	
VVLIGGKPDR	ddPTM_K562_Methotrexat_30min_R1	1	VVLIGGKPDR	10	1	Q5T6W2;P61978-3;P61978;P61978-2	Q5T6W2	HNRNPK	Heterogeneous nuclear ribonucleoprotein K	0		136.99	0.00041107	10945000.0	2596.2	1803.1	2973.6	2403.7	2053.9	1982.8	1854.7	2591.7	2362.5	2942.4	False	True	2482.0741566021056	2101.0316275403584	2349.4819966483615	2192.9713529850037	2324.0238506136016	2365.9480378739026	2270.6636876051525	2500.5484420104553	2252.667890659351	2409.5028475610457	1.0301187894899224	0.8719772336716974	0.9750899439801706	0.9101343686747579	0.9645242183324382	0.9819237359560582	0.9423785034757567	1.0377860497411606	0.9349098271203761	1.0	11.234519790724331	-7.99246559339057	24.557684009972835	0.9787559405137765	0.942730418760318	0.0944248064685198	0.046844509033055946	313.4789187095274	1021742.4595478659	0.01349571987909762	0.015272188684224655	1.0174999735539716e-08	7.99246559339057	-0.03602552175345841	
VVNANQNAS(ph)PNVPGKR	ddPTM_K562_Methotrexat_30min_R1	1	VVNANQNASPNVPGKR	16	1	Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4	Q8IWI9-3	MGA	MAX gene-associated protein	1	VVNANQNAS(1)PNVPGKR	69.747	0.029586	20478000.0	1050.9	772.13	1372.9	1052.5	870.44	649.73	669.57	1159.8	1154.8	1681.4	True	False	1004.7036943121303	899.711358534046	1084.7470517885856	960.2289591116687	984.9181170106161	775.2811270162455	819.7381168435774	1119.009176619102	1101.113600056473	1376.882166900878	0.7296947541804129	0.6534410715472767	0.7878285287332629	0.6973937074608039	0.7153249135526937	0.5630700619511024	0.5953582205866353	0.812712375480755	0.7997152018715501	1.0	10.427189384075632	-9.983628064917015	1.4841652637853153	0.9934552578385439	0.6820657847004035	0.6626516604183634	0.06891489055168835	0.25946486456978307	1.293110860548633	0.06934000792673055	0.020610785316674186	1.0384173483799728e-10	9.983628064917015	-0.31138947313814047	
VVNGAAASQPPS(ph)KR	ddPTM_K562_Methotrexat_30min_R1	1	VVNGAAASQPPSKR	14	1	O75533	O75533	SF3B1	Splicing factor 3B subunit 1	1	VVNGAAASQPPS(1)KR	172.09	8.999e-05	4944500.0	2305.4	1646.8	2323.0	2438.6	1566.7	1338.3	1208.2	1485.9	2123.9	2309.8	True	False	2204.057376408016	1918.9057091861036	1835.434045673307	2224.8117241707505	1772.7485110065388	1596.9075343386337	1479.1696055235602	1433.640054783863	2025.1603525804858	1891.4728375803782	1.1652598613192373	1.0145034446494186	0.9703729333069581	1.1762324469944745	0.9372318099340434	0.8442667019112153	0.7820200090294466	0.7579490576337395	1.0706790562063393	1.0	10.885294343434014	-7.956509752169833	6.673522999030594	0.8711765909111888	1.0685271343046692	0.4159202212450387	0.10557337945265716	0.18623886931906483	20.987027534258896	0.03285446608337459	0.03710891941388819	1.1053256487946859e-08	7.956509752169833	0.19735054339348035	
VVNITSPGHDAS(ph)SRSPTTTASVSATAAPR	ddPTM_K562_Methotrexat_30min_R1	2	VVNITSPGHDASSRSPTTTASVSATAAPR	29	1	Q15723-2;Q15723-3;Q15723-1;Q15723;Q15723-4	Q15723-2	ELF2	ETS-related transcription factor Elf-2	1	VVNITS(0.003)PGHDAS(0.307)S(0.307)RS(0.307)PT(0.055)T(0.009)T(0.009)AS(0.002)VS(0.002)ATAAPR;VVNIT(0.001)S(0.002)PGHDAS(0.491)S(0.491)RS(0.008)PT(0.003)T(0.003)T(0.001)ASVSATAAPR	68.153	0.00024759	70983000.0	1909.43	1730.54	2591.4	2333.5	1933.63	1686.8	2066.58	2244.92	2030.85	2363.8	True	False	1825.4937434869257	2016.482320849479	2047.5005535763266	2128.9256779924744	2187.9362375295686	2012.7502270958742	2530.0631711495425	2165.96489116723	1936.4362267706006	1935.6929143096786	0.9430699105172615	1.0417366855778423	1.0577610417644794	1.099826146107327	1.1303116425932918	1.0398086453778628	1.3070581353302275	1.1189610062398108	1.0003840032969211	1.0	10.918634380795897	-6.06633123851854	0.9143658428194243	1.1131485637225877	0.8024859981982193	0.23322301131936152	0.08338873433828199	4.012617624610081	2.093744199051057	0.028864024453666176	1.3477666857616564	8.583585974934562e-07	6.06633123851854	-0.31066256552436844	
VVNTDHGS(ph)PEQLQIPVTDSGR	ddPTM_K562_Methotrexat_30min_R1	5	VVNTDHGSPEQLQIPVTDSGR	21	0	Q6IQ49-3;Q6IQ49-2;Q6IQ49	Q6IQ49-3	SDE2	Protein SDE2 homolog	1	VVNT(0.032)DHGS(0.968)PEQLQIPVTDSGR;VVNT(0.004)DHGS(0.996)PEQLQIPVTDSGR;VVNT(0.005)DHGS(0.994)PEQLQIPVT(0.001)DSGR;VVNTDHGS(1)PEQLQIPVTDSGR;VVNTDHGS(1)PEQLQIPVTDSGR	134.0	2.4794000000000004e-09	429821000.0	8972.79	7542.9	9895.119999999999	9986.73	8102.889999999999	7537.83	7354.67	8166.530000000001	8972.65	8818.46	True	False	8578.356895315386	8789.236017621974	7818.26953681569	9111.208886298597	9168.562061881512	8994.408966273477	9004.141965449391	7879.308511066735	8555.51345994693	7221.351441375465	1.1879157197868562	1.217117888386259	1.0826601641377156	1.2617041228730403	1.2696462893841873	1.2455298761308167	1.2468776846753709	1.0911127335420125	1.1847524011817578	1.0	12.81805314051676	-10.248980196437792	0.9455110199252839	1.0024337281581663	1.2121273677594937	0.5072447323484535	0.06067096001929639	0.7869010283868775	1.3853775118431197	0.060796990314283136	0.020267620149042175	5.636633579436188e-11	10.248980196437792	0.20969363960132736	
VVPEDGS(ph)PEKR	ddPTM_K562_Methotrexat_30min_R1	3	VVPEDGSPEKR	11	1	Q02040	Q02040	AKAP17A	A-kinase anchor protein 17A	1	VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR	153.34	2.7304e-08	89176000.0	9095.7	6363.1	11949.099999999999	9893.2	6006.4	5877.3	5817.9	7495.1	7761.9	9751.9	True	False	8695.863918883668	7414.494120793109	9441.147204113176	9025.878516183906	6796.346879753416	7013.005044884153	7122.712173460946	7231.493084736882	7401.050963178337	7985.736412156927	1.0889244861182361	0.9284671742365301	1.1822512936616132	1.13024999202873	0.851060757453393	0.8781914006337654	0.8919292856470729	0.9055511867043549	0.9267837781261468	1.0	12.963209737906535	-7.761616224325136	24.99999951493849	0.9018110467753357	1.078599819013494	0.5920179248347126	0.07040429172065502	3.3847850805280166	478522.2095878887	0.02180057329149024	0.026329023479650642	1.731345632263694e-08	7.761616224325136	0.17678877223815825	
VVPGQFDDADS(ph)SDSENR	ddPTM_K562_Methotrexat_30min_R1	1	VVPGQFDDADSSDSENR	17	0	E9PFQ8;Q9BRS2	E9PFQ8	RIOK1	Serine/threonine-protein kinase RIO1	1	VVPGQFDDADS(0.492)S(0.492)DS(0.015)ENR	140.75	7.8969e-07	39028000.0	1783.7	1820.5	2333.4	2084.9	1642.7	1837.0	1631.5	2090.7	2169.4	2236.9	True	False	1705.2906837420753	2121.3066817909303	1843.6512277977165	1902.1200540160742	1858.7438431291516	2191.974251348781	1997.405405902738	2017.1688959799599	2068.5450675117013	1831.7757339958207	0.9309494891179545	1.1580602594639295	1.0064830500707587	1.038402255644475	1.0147223858427816	1.1966389829650304	1.0904202784396615	1.1012095304809635	1.1292567256578914	1.0	10.839027168414974	-8.208652021443923	24.999411119159436	1.1090132359928122	1.036044307494081	0.21768676405023535	0.06902567391885603	508.33070586504505	240738.91197396445	0.02145035645912941	0.02145034664154787	6.1851178436167944e-09	8.208652021443923	-0.07296892849873116	
VVPGQFDDADSS(ph)DSENR	ddPTM_K562_Methotrexat_30min_R1	2	VVPGQFDDADSSDSENR	17	0	E9PFQ8;Q9BRS2	E9PFQ8	RIOK1	Serine/threonine-protein kinase RIO1	1	VVPGQFDDADS(0.005)S(0.994)DSENR;VVPGQFDDADS(0.232)S(0.731)DS(0.037)ENR	298.33	5.081999999999997e-195	54677300.0	2972.0	2628.5	3591.3	3314.0	2688.26	2751.0	2234.8900000000003	3332.1000000000004	2804.7	3048.2	True	False	2841.3544385723176	3062.814948139224	2837.535208018316	3023.466765316931	3041.8133096307142	3282.5918157106644	2736.1209730910005	3214.9081543477396	2674.310109177686	2496.141442338084	1.138298651822743	1.2270197899003465	1.1367685980809068	1.2112561868629177	1.2186061486890385	1.3150664301442505	1.0961401972991294	1.287951115196582	1.0713776326203357	1.0	11.285483970616335	-9.951570244581918	5.77990625249465	1.0004899930719342	1.2028200216555542	0.5390690745883004	0.06385554660817291	0.11543268663310213	8.187374640956326	0.057869315018193694	0.015035254954547075	1.1179689850420386e-10	9.951570244581918	0.20233002858362004	
VVPGQFDDADSS(ph)DSENRDLK	ddPTM_K562_Methotrexat_30min_R1	4	VVPGQFDDADSSDSENRDLK	20	1	E9PFQ8;Q9BRS2	E9PFQ8	RIOK1	Serine/threonine-protein kinase RIO1	1	VVPGQFDDADS(0.283)S(0.707)DS(0.01)ENRDLK;VVPGQFDDADS(0.117)S(0.88)DS(0.003)ENRDLK;VVPGQFDDADS(0.319)S(0.681)DSENRDLK;VVPGQFDDADS(0.204)S(0.796)DSENRDLK	125.78	6.279299999999999e-06	411795000.0	12803.599999999999	9061.400000000001	18653.3	14493.8	8542.0	7876.1	8192.0	11540.0	11432.5	15462.1	True	False	12240.769074597763	10558.642332535192	14738.22724242698	13223.151057076195	9665.422723570471	9398.044856313625	10029.264532733818	11134.131659065739	10901.005570354722	12661.763859187611	0.9667507000389708	0.8338997986345832	1.1639947961699386	1.0443372032626583	0.7633551558108597	0.7422382032100708	0.7920906316268406	0.8793507589376346	0.8609389411764105	1.0	13.628190774335282	-7.757367529603119	24.99996472340992	0.826380028598131	1.0017744520654945	0.37513566766117146	0.10193502101912981	110.1789426893165	676461.8198901982	0.03162512506469294	0.039332325246164576	1.7483664754597835e-08	7.757367529603119	0.17539442346736356	
VVPGQFDDADSSDS(ph)ENRDLK	ddPTM_K562_Methotrexat_30min_R1	1	VVPGQFDDADSSDSENRDLK	20	1	E9PFQ8;Q9BRS2	E9PFQ8	RIOK1	Serine/threonine-protein kinase RIO1	1	VVPGQFDDADS(0.026)S(0.111)DS(0.864)ENRDLK	79.445	0.0032991	237820000.0	1839.9	1133.5	1946.6	2089.6	1109.2	995.7	1049.7	1570.6	1506.6	2165.6	True	False	1759.020199034054	1320.7916087942976	1538.035261862962	1906.4080123132942	1255.0792419789705	1188.1049330800104	1285.1219458020869	1515.3611077754447	1436.5584948433345	1773.388854906947	0.9918976281862069	0.7447839796329395	0.8672859635985846	1.0750084545971317	0.707729293835461	0.6699630088418214	0.7246701377682446	0.8545001867934703	0.8100640143690953	1.0	10.792293198527357	-6.243701460629251	23.313289293852385	0.8206616341499717	0.9918979936715063	0.135362152274485	0.12276861279360596	3021.267875109607	3970751.6814580797	0.03179329013930194	0.8610662699493629	5.705563449595999e-07	6.243701460629251	0.1712363595215346	
VVPQQITHT(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	2	VVPQQITHTSPR	12	0	H7BXF5;A0A2R8YDB8;Q9H0E3;Q9H0E3-3	H7BXF5	SAP130	Histone deacetylase complex subunit SAP130	1	VVPQQITHT(0.722)S(0.278)PR;VVPQQIT(0.009)HT(0.496)S(0.496)PR	166.79	0.00025541	77249000.0	5567.0	5242.1	6408.8	5888.9	4878.3	5103.4	4736.1	5482.8	5697.700000000001	6348.7	True	False	5322.281345737586	6108.267924535147	5063.680461433959	5372.629280107082	5519.881956496584	6089.559822718213	5798.290985532307	5289.966816319378	5432.81517062848	5198.888909839184	1.0237343859502124	1.1749179546758373	0.9739928183213656	1.0334187502908718	1.061742624669264	1.1713194738963137	1.1152942650031858	1.0175187252622044	1.0449954336101657	1.0	12.343987612619081	-9.282717070213433	23.56426242641173	1.0234427866540157	1.0799481718079145	0.16322144134305794	0.06045614456044489	826.1329240695184	914902.6618158548	0.034181745795049095	0.016455351818415113	5.21534364400988e-10	9.282717070213433	0.0565053851538988	
VVPQQITHTS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	VVPQQITHTSPR	12	0	H7BXF5;A0A2R8YDB8;Q9H0E3;Q9H0E3-3	H7BXF5	SAP130	Histone deacetylase complex subunit SAP130	1	VVPQQITHT(0.211)S(0.788)PR	130.19	0.00017443	72600000.0	1469.6	1575.0	1644.8	1496.5	1358.8	1432.7	1373.6	1322.0	1468.2	1419.8	True	False	1404.9981436493538	1835.241979577431	1299.5789575219349	1365.30416846614	1537.5060169500762	1709.5489983164928	1681.6647658890583	1275.5045106832677	1399.9437024618237	1162.660461856706	1.208433751506134	1.5784848971699346	1.117763096068974	1.1742931090009054	1.3224032874522644	1.4703768248783788	1.4463936988134356	1.097056752619209	1.2040864451743627	1.0	10.183214124796212	-9.278795340598142	24.46793948299303	1.112928649853875	1.3314525846326764	0.3571953650614045	0.14157285925625723	798.083982501604	1125108.2114865836	0.07958947403285659	0.03838057111531497	5.26265208175392e-10	9.278795340598142	0.21852393477880128	
VVPSFLPVDQGGS(ph)LVGR	ddPTM_K562_Methotrexat_30min_R1	2	VVPSFLPVDQGGSLVGR	17	0	Q14126	Q14126	DSG2	Desmoglein-2	1	VVPSFLPVDQGGS(1)LVGR;VVPSFLPVDQGGS(1)LVGR	178.99	1.0078e-09	28009000.0	3131.8	1876.62	2131.29	3033.5	2612.5	2143.4	2516.5	3431.0	3995.0	3990.3999999999996	True	False	2994.1298219114356	2186.6995579140307	1683.9613548011453	2767.5577648125845	2956.089541714802	2557.5817149379295	3080.8891841582845	3310.3297852906885	3809.2733219826896	3267.6998922334114	0.9162805400299487	0.6691861645897546	0.5153353766677115	0.8469436778421566	0.9046392383648091	0.7826856196362239	0.9428311306925297	1.0130458409472054	1.165735363592133	1.0	11.674059776142062	-8.722959091386345	0.851454319177638	1.086750554294339	0.7226811622960911	0.5581694360568378	0.11654412022185026	0.4688827585798324	0.6730523188564617	0.09567642639306627	0.05824765863921591	1.892521877414833e-09	8.722959091386345	-0.36406939199824784	
VVS(ph)SPPCAAAVSR	ddPTM_K562_Methotrexat_30min_R1	2	VVSSPPCAAAVSR	13	0	P12755	P12755	SKI	Ski oncogene	1	VVS(0.498)S(0.498)PPCAAAVS(0.004)R;VVS(0.5)S(0.5)PPCAAAVSR	151.16	2.0684e-09	77171000.0	4845.7	4029.8	5249.6	4841.6	3885.0	3704.0	3774.3999999999996	3981.3	4234.7	5077.1	True	False	4632.688830077352	4695.655955111828	4147.780700028666	4417.144445068933	4395.945596004598	4419.74557811425	4620.905279827946	3841.2754223776765	4037.829721301653	4157.587991895112	1.1142731889519621	1.1294182983656957	0.997641110209678	1.0624295754364803	1.0573307419047162	1.0630552105524147	1.1114389614449613	0.9239192122610365	0.9711952529142093	1.0	12.02153108193948	-9.261738559937985	24.99999891101995	0.9606679215255962	1.0737167776237775	0.626724114361978	0.039339336530271024	17.774091248145783	1485050.9550216352	0.020576805408583806	0.010856247210819639	5.473453590700257e-10	9.261738559937985	0.11304885609818127	
VVS(ph)T(ph)FGVEYDPDT(ph)MQFHWDR	ddPTM_K562_Methotrexat_30min_R1	1	VVSTFGVEYDPDTMQFHWDR	20	0	H0YJG4;Q9HCK8-2;Q9HCK8;A0A2R8Y840	H0YJG4	CHD8	Chromodomain-helicase-DNA-binding protein 8	3	VVS(1)T(1)FGVEY(0.059)DPDT(0.941)MQFHWDR	45.126000000000005	0.031757	7997000.0	442.95	348.58	318.68	675.29	257.16	294.46	349.26	335.53	313.39	412.51	True	False	423.47844837335407	406.1769201530802	251.79342301987492	616.0883741553617	290.98104748225023	351.3602275733052	427.59044564240867	323.7292197197855	298.82056730316793	337.80044169637273	1.2536349752733356	1.2024167822674627	0.745391041395369	1.823823471223061	0.8613992510518815	1.0401414095518575	1.2658078346349306	0.9583445720025583	0.884606798625085	1.0	8.400027404334242	-9.345342610891183	7.012357883000302	0.9377377845329254	1.1632690719245549	0.12227420500927022	0.27283687984018196	0.5942234033943008	42.62358898375689	0.14656003423518627	0.06963539517105426	4.514996199777637e-10	9.345342610891183	0.22553128739162942	
VVSSVSS(ph)SPR	ddPTM_K562_Methotrexat_30min_R1	1	VVSSVSSSPR	10	0	P29375-2;P29375	P29375-2	KDM5A	Lysine-specific demethylase 5A	1	VVS(0.004)S(0.005)VS(0.114)S(0.439)S(0.439)PR	117.14	0.0034378	33354000.0	3662.0	3467.8	4622.5	3813.9	3565.6	3778.5	3012.8	3528.2	3852.0	4209.1	True	False	3501.0228647549907	4040.7950074784885	3652.3004202001107	3479.541308461749	4034.53889758404	4508.641648732372	3688.497092800346	3404.1112061972026	3672.9213607702927	3446.7912029870854	1.0157339561853664	1.1723353024623664	1.0596233438900868	1.0095016215215709	1.170520249119702	1.308069268839104	1.070124900401217	0.9876174696184395	1.065605992491578	1.0	11.751038191566066	-8.997845535935483	24.996472643799457	1.0217412506036556	1.1248969037723031	0.23836903815217292	0.08422499304483891	105.7161202845219	1226524.7368478074	0.03775600303260925	0.025257878522553148	1.0049731621622961e-09	8.997845535935483	0.1031556531686475	
VVSSVSSS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	VVSSVSSSPR	10	0	P29375-2;P29375	P29375-2	KDM5A	Lysine-specific demethylase 5A	1	VVS(0.001)S(0.012)VS(0.07)S(0.239)S(0.678)PR	112.85	0.002647	32504000.0	5096.9	4085.3	5804.1	5296.7	4482.3	4137.7	4258.9	5654.1	4947.5	5246.0	True	False	4872.846378855738	4760.326386773131	4585.898727719519	4832.3465346572675	5071.801015436656	4937.251965054898	5214.0667380932655	5455.242098225613	4717.491804883447	4295.898565220651	1.134302010365427	1.1081095874359002	1.0675062872402745	1.1248744497320464	1.1806147045690665	1.149294353695082	1.2137313437300525	1.269872185156079	1.0981385461649376	1.0	12.06874421346474	-7.60717036020813	4.702242860967474	1.1681274134718038	1.1026051427374268	0.0623825798687454	0.06958221729169614	0.39035764154761443	15.466013741890821	0.020178293239067013	0.026455926504996417	2.4707547547080287e-08	7.60717036020813	-0.065522270734377	
VVTDTDETELAR	ddPTM_K562_Methotrexat_30min_R1	1	VVTDTDETELAR	12	0	P05198	P05198	EIF2S1	Eukaryotic translation initiation factor 2 subunit 1	0		110.54	0.017523	6517700.0	487.94	464.07	694.77	545.71	463.34	489.07	540.48	402.46	421.87	583.78	False	True	466.4907418428591	540.7496796587293	548.9472715938198	497.8684515694336	524.2773313906744	583.575855801387	661.6963982729458	388.30525368350015	402.2573557809354	478.05178505614003	0.975816337111003	1.1311529348127554	1.1483008509828159	1.0414529704370132	1.0966956881650507	1.2207377402279853	1.3841521336338896	0.8122660887834557	0.8414514250452936	1.0	8.901023096677504	-9.291028035756176	24.998396809295862	0.8701440094784362	1.1397410386427478	0.525062500867273	0.11218947480097606	578.3596407267752	488632.0736967563	0.06342622316775877	0.03047577360394681	5.11648805131778e-10	9.291028035756176	0.2695970291643116	
VVVS(ph)PTK	ddPTM_K562_Methotrexat_30min_R1	4	VVVSPTK	7	0	P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1	P19338	NCL	Nucleolin	1	VVVS(0.994)PT(0.006)K;VVVS(0.998)PT(0.002)K;VVVS(0.986)PT(0.014)K;VVVS(1)PTK	143.03	3.4495e-08	386257100.0	21808.0	15666.1	29364.899999999998	22827.1	15421.599999999999	14510.3	13181.0	17210.899999999998	18860.1	23141.7	True	False	20849.346432161903	18254.65674683047	23201.608785102075	20825.883584359115	17449.810708711575	17314.210113960908	16137.174781001522	16605.58289176902	17983.298067565906	18950.513882342104	1.1001995281821413	0.9632803025906318	1.2243261016114766	1.0989614167542159	0.9208093678647485	0.9136538576979758	0.8515428595336392	0.8762602953602189	0.9489609716770034	1.0	14.209949350133389	-7.7744855625295575	6.4338073609383	0.9080205175300257	1.0968045157178672	0.6089082642590997	0.06967965271521334	0.10111449773578159	16.642408119291005	0.021581945309002624	0.025653619885562574	1.680793800255793e-08	7.7744855625295575	0.18878399818784153	
VVVS(ph)PTKK	ddPTM_K562_Methotrexat_30min_R1	1	VVVSPTKK	8	1	P19338;C9JYW2;C9JLB1;C9J1H7;C9JWL1	P19338	NCL	Nucleolin	1	VVVS(0.965)PT(0.035)KK	107.45	0.010148	525480000.0	3491.5	2286.0	6014.8	3708.4	2073.2	2149.0	2029.9	2938.9	2871.1	4723.9	True	False	3338.017840604057	2663.722644643813	4752.375677105386	3383.2903296624354	2345.862138902634	2564.2638356823786	2485.1567474360813	2835.5372212156235	2737.6231876707157	3868.355934473088	0.8629034910818596	0.6885929551895387	1.2285259571784237	0.874606780496086	0.6064235501178528	0.6628820819797854	0.6424322863595505	0.7330083552928938	0.7076968185047867	1.0	11.917504830581862	-7.61557270788599	6.6959136493227716	0.7058538544840449	0.9266280713367411	0.24899248189766388	0.15971745066553647	0.2744899920460742	16.64980428515001	0.0468119475039559	0.060581152657669314	2.4234122123830833e-08	7.61557270788599	0.22077421685269616	
VY(ph)DRRY(ph)CGSYR	ddPTM_K562_Methotrexat_30min_R1	1	VYDRRYCGSYR	11	2	P49760;B1AVT0;P49760-2;P49760-3	P49760	CLK2	Dual specificity protein kinase CLK2	2	VY(1)DRRY(1)CGSYR	58.246	0.025785000000000002	18615000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
VY(ph)RRDNPAMT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	VYRRDNPAMTR	11	2	B3KWE1;P12081-2;P12081	B3KWE1	HARS	Histidine--tRNA ligase, cytoplasmic	2	VY(1)RRDNPAMT(1)R	55.258	0.029887	3403300.0	194.2	0.0	170.81	162.32	0.0	53.713	59.398999999999994	137.04	158.88	146.59	True	False	185.66320052851427	0.0	134.95931525676178	148.08965761805797	0.0	64.09227706189274	72.72073779050977	132.2202255249886	151.4937034785006	120.04113051385728	1.5466632122985688	0.0	1.1242756101933111	1.2336576387121148	0.0	0.5339193057207511	0.6057985082214388	1.1014576833706626	1.2620149679531092	1.0	6.907385000786705	-9.29655837152012	7.652392783771095	1.1387527406991975	0.6932931358747185	0.1288971356089461	0.47287073114117056	0.5317403714197108	100.57308511601116	0.2530356055784809	0.12259820424550072	5.051747421677165e-10	9.29655837152012	-0.445459604824479	
VYAT(ph)ILNAGT(ph)NTDGFKEQGVT(ph)FPSGDIQEQLIR	ddPTM_K562_Methotrexat_30min_R1	1	VYATILNAGTNTDGFKEQGVTFPSGDIQEQLIR	33	1	A0A0U1RQF0;P49327	A0A0U1RQF0	FASN	Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase	3	VY(0.492)AT(0.518)ILNAGT(0.848)NT(0.161)DGFKEQGVT(0.85)FPS(0.132)GDIQEQLIR	43.068000000000005	0.0089087	66780000.0	837.64	749.45	743.58	734.82	724.2	713.0	669.51	695.22	703.76	381.35	True	False	800.8183485618165	873.283874028131	587.5127196219362	670.3994714816498	819.444993726262	850.7771590700494	819.6646603162377	670.7687185455526	671.0423512086456	312.28381964294624	2.5643927036547796	2.796442912177171	1.8813421723023513	2.146763390585397	2.6240392302847617	2.724371567002083	2.6247426499823523	2.147945799153106	2.1488220298313587	1.0	8.286714010732268	-10.339291473634571	1.242928106388286	1.0025516215852712	2.4616161242591508	0.7193655756113926	0.27167432905422617	0.6921000620523168	1.7490201348107153	0.2825606266216092	0.0857844761069253	4.578345112227975e-11	10.339291473634571	1.4590645026738795	
VYQWDDPDPR	ddPTM_K562_Methotrexat_30min_R1	2	VYQWDDPDPR	10	0	A0A0U1RQF0;P49327	A0A0U1RQF0	FASN	Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase	0	;	153.05	4.1323e-08	80493000.0	6996.1	6298.9	8332.3	8000.3	6480.1	6385.2	6213.799999999999	8322.6	7678.7	8264.2	False	True	6688.55982089361	7339.686162006525	6583.464097616739	7298.926120267058	7332.346732733436	7619.049531688747	7607.402826355146	8029.88944070541	7321.7189130183915	6767.473298264682	0.9883392997810118	1.084553398073779	0.9728097633284898	1.0785304645588556	1.0834688826350596	1.1258337042338131	1.1241127214060584	1.1865417249247865	1.0818984560893399	1.0	12.724401574817565	-7.638006048677524	2.1551243626336327	1.1146908454718523	1.0222296259871826	0.31274814111712546	0.05319966241789549	0.3282742580752822	3.1089574211118816	0.01660057340319682	0.023339600495645426	2.301409764082865e-08	7.638006048677524	-0.09246121948466968	
VYS(ph)SSEFLAVQPTPTFAER	ddPTM_K562_Methotrexat_30min_R1	1	VYSSSEFLAVQPTPTFAER	19	0	V9GYV0;O60307	V9GYV0	MAST3	Microtubule-associated serine/threonine-protein kinase 3	1	VYS(0.942)S(0.058)SEFLAVQPTPTFAER	215.15	4.9923e-28	9625300.0	644.4	462.53	819.75	646.71	546.01	416.77	651.39	565.89	694.19	580.37	True	False	616.0729475827736	538.9552208342536	647.6956775465751	590.0139383820493	617.8198854245742	497.304904047159	797.480789059751	545.9873279504945	661.9172584198158	475.25936909971585	1.2962878538297962	1.1340233478304633	1.3628256898406979	1.2414567218310986	1.2999636105962746	1.0463863237229896	1.6779906739564534	1.1488197044589752	1.3927495204853848	1.0	8.892571257722649														
VYSLDDIRR	ddPTM_K562_Methotrexat_30min_R1	2	VYSLDDIRR	9	1	Q14566	Q14566	MCM6	DNA replication licensing factor MCM6	0	;	124.92	0.0036805	26272000.0	9895.0	8404.0	11122.3	9557.5	8478.4	7862.0	8438.8	9152.8	9715.8	10880.8	False	True	9460.027647938463	9792.61815642459	8787.881225222653	8719.60881397603	9593.458208794173	9381.220230867773	10331.415715189718	8830.890836143573	9264.114578653172	8910.181682892273	1.0617098488689525	1.0990368664677863	0.9862740781252037	0.9786117864148443	1.0766849151026634	1.052865201265189	1.1595067399160046	0.9911010965241102	1.0397222984173777	1.0	13.121239133955342														
VYSS(ph)SEFLAVQPTPTFAER	ddPTM_K562_Methotrexat_30min_R1	2	VYSSSEFLAVQPTPTFAER	19	0	V9GYV0;O60307	V9GYV0	MAST3	Microtubule-associated serine/threonine-protein kinase 3	1	VYS(0.078)S(0.842)S(0.078)EFLAVQPT(0.001)PTFAER;VYS(0.066)S(0.867)S(0.066)EFLAVQPTPTFAER	86.22200000000001	0.004146	14975200.0	1041.77	719.4200000000001	855.1700000000001	966.95	785.8900000000001	696.3599999999999	907.3399999999999	875.03	733.04	905.99	True	False	995.975038180177	838.2919269508544	675.6815035895145	882.1789947867253	889.2483100242091	830.9217145722565	1110.8340919348998	844.254698928274	698.9611303995471	741.9064317774031	1.3424537051041538	1.129915971940745	0.9107368188880207	1.1890704231708409	1.1985990037770875	1.1199818184371273	1.497269796237846	1.1379530662723503	0.9421149358754433	1.0	9.535093437371787	-9.672884486336525	5.314467107097582	0.9729441843843859	1.1898433577194227	0.2768191130096016	0.14377401138547863	0.28224353417011394	12.596117934639672	0.110033016722629	0.03868157850201096	2.123809277757737e-10	9.672884486336525	0.21689917333503683	
VYTY(ph)IQSR	ddPTM_K562_Methotrexat_30min_R1	2	VYTYIQSR	8	0	Q92630;A0A0A0MTH5;Q9NR20-5;Q9NR20-2;Q9NR20;Q92630-2;Q9NR20-3;Q9NR20-4	Q92630	DYRK2;DYRK4	Dual specificity tyrosine-phosphorylation-regulated kinase 2;Dual specificity tyrosine-phosphorylation-regulated kinase 4	1	VY(0.003)T(0.223)Y(0.775)IQSR;VY(0.026)T(0.346)Y(0.628)IQSR	101.6	0.011986	29915000.0	1890.15	1827.17	2720.0	2492.7	2106.29	2026.8600000000001	2005.28	2269.84	2329.09	2392.06	True	False	1807.0612692017066	2129.078785920315	2149.10917099931	2274.168861166418	2383.3040539018084	2418.5220093025523	2455.0150857178305	2190.008440642442	2220.811114267	1958.8347544646783	0.9225184845648456	1.0869108693663965	1.097136532880555	1.1609804532939871	1.2166947969805302	1.2346738303423148	1.253303822653867	1.1180159202560913	1.1337409187810312	1.0	10.935779982946702	-6.025548489409603	1.0581465352797848	1.1724423794828558	0.6963466871425084	0.4965162843354445	0.06992055030144313	2.1583768190935855	1.4268073341031176	0.022134045782108456	1.2970489543029704	9.428693332866784e-07	6.025548489409603	-0.47609569234034743	
VYYS(ph)PPVAR	ddPTM_K562_Methotrexat_30min_R1	4	VYYSPPVAR	9	0	O94964-2;H0YDM2;O94964-3;O94964	O94964-2	SOGA1	Protein SOGA1;N-terminal form;C-terminal 80 kDa form	1	VYYS(1)PPVAR;VY(0.001)YS(0.999)PPVAR;VYYS(1)PPVAR;VY(0.001)YS(0.999)PPVAR	96.665	0.0094096	194111000.0	8776.5	7943.2	10114.2	9870.3	8056.9	8093.200000000001	7716.6	9368.7	8615.7	10131.3	True	False	8390.69556868438	9255.678788685364	7991.367638721031	9004.986123629356	9116.523570772055	9657.096358745746	9447.243981114963	9039.197510770295	8215.157987535988	8296.423395695765	1.011362989627256	1.1156227626337472	0.9632304497462124	1.0854058061093166	1.0988498460073486	1.1640071749177974	1.1387128561949058	1.0895294369209612	0.9902047660438908	1.0	13.01827380649933	-6.235169582783008	21.85692173002968	1.0773882711730232	1.0113625089296783	0.06955069591800611	0.06326106416371566	3828.720133965796	3185278.978408636	0.01627790119023752	0.9195175760238091	5.818759631837349e-07	6.235169582783008	-0.06602576224334489	
WAAHGAS(ph)PEDFSLTLGAR	ddPTM_K562_Methotrexat_30min_R1	2	WAAHGASPEDFSLTLGAR	18	0	Q86UU1-3;Q86UU1-2;Q86UU1	Q86UU1-3	PHLDB1	Pleckstrin homology-like domain family B member 1	1	WAAHGAS(1)PEDFSLTLGAR;WAAHGAS(1)PEDFSLTLGAR	151.64	2.3808000000000003e-13	21665900.0	6380.9	4936.0	5995.7	6662.1	5586.2	5017.299999999999	5452.6	7364.9	7680.1	8337.9	True	False	6100.403276273927	5751.590102345523	4737.28450608844	6078.0440365775285	6320.883214517599	5986.822216272311	6675.484349509818	7105.872292534945	7323.05382732397	6827.825514097074	0.893462093265085	0.8423750856653408	0.6938203819514138	0.8901873699069331	0.925753477658031	0.8768270665252964	0.9776881872167463	1.0407225957757416	1.0725308976048702	1.0	12.737210475253379	-8.611076438367382	0.9385537926379447	1.050044287548424	0.8233243117310239	0.6744310680003278	0.059358159459955116	0.34261215524207156	0.6128851070836289	0.044263914997244816	0.029021924324201375	2.448632230330138e-09	8.611076438367382	-0.2267199758174	
WAEEIQT(ph)S(ph)RPQTITEQDSNK	ddPTM_K562_Methotrexat_30min_R1	1	WAEEIQTSRPQTITEQDSNK	20	1	P13611-2;P13611-5;P13611	P13611-2	VCAN	Versican core protein	2	WAEEIQT(1)S(0.997)RPQT(0.002)ITEQDSNK	64.454	0.030061	0.0	0.0	0.0	0.0	55.191	0.0	0.0	133.83	0.0	0.0	0.0	True	False	0.0	0.0	0.0	50.35249071955544	0.0	0.0	163.84478423044027	0.0	0.0	0.0											0.0														
WAHDKFSGEEGEIEDDES(ph)GTENREEKDNIQPTTE	ddPTM_K562_Methotrexat_30min_R1	1	WAHDKFSGEEGEIEDDESGTENREEKDNIQPTTE	34	3	Q9Y2W1	Q9Y2W1	THRAP3	Thyroid hormone receptor-associated protein 3	1	WAHDKFSGEEGEIEDDES(0.497)GT(0.497)ENREEKDNIQPT(0.006)TE	70.465	1.0466e-05	19457000.0	876.88	691.61	1456.6	1184.9	706.85	573.31	460.27	764.04	859.42	1039.7	True	False	838.3334051464659	805.8867971400297	1150.8795656167617	1081.0216566759298	799.8131646166927	684.0940435714581	563.4972639747799	737.1682801380055	819.4657517843216	851.4002551010126	0.9846525181590456	0.946542818505988	1.3517491435097329	1.2696985350887335	0.9394091202401631	0.8034928806666791	0.661847656961208	0.8658304666006303	0.9624917855904305	1.0	9.73369371216227	-7.9469229828253765	5.65733974802259	0.8410546712288368	1.1385738097525693	0.4671783990884848	0.14059906572990696	0.17891393713095502	12.389548688886535	0.0479593633861514	0.0542058687380309	1.1299962888630636e-08	7.9469229828253765	0.29751913852373246	
WCSLPY(ph)EDST(ph)WELKEDVDLAK	ddPTM_K562_Methotrexat_30min_R1	1	WCSLPYEDSTWELKEDVDLAK	21	1	H3BTW3;Q3L8U1-2;Q3L8U1-3;Q3L8U1	H3BTW3	CHD9	Chromodomain-helicase-DNA-binding protein 9	2	WCS(0.327)LPY(0.496)EDS(0.306)T(0.871)WELKEDVDLAK	40.404	0.033658	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
WDAPDDELDNDNSS(ph)AR	ddPTM_K562_Methotrexat_30min_R1	1	WDAPDDELDNDNSSAR	16	0	P11277;P11277-3;P11277-2	P11277	SPTB	Spectrin beta chain, erythrocytic	1	WDAPDDELDNDNS(0.187)S(0.813)AR	213.94	1.0899999999999998e-140	0.0	1474.7	1107.5	1431.1	1583.2	1157.4	996.55	1342.6	1451.1	1548.6	1709.7	True	False	1409.8739537559222	1290.495550718734	1130.731667138644	1444.4033140765735	1309.6183868251537	1189.119183550151	1643.7122267637242	1400.0639905086905	1476.6059240106124	1400.05676266827	1.0070119950486451	0.9217451642883885	0.8076327312498829	1.0316748239005584	0.9354037791505281	0.8493364092495023	1.1740325611020859	1.0000051625338437	1.0546757555718331	1.0	10.45126960437514	-8.750284667712899	24.999986592417986	1.0571788187465865	0.9252214265418046	0.4181946169941042	0.0761070235946028	213.0507626098115	477490.74632303737	0.02893583946837024	0.022199460676462727	1.777114180260808e-09	8.750284667712899	-0.13195739220478186	
WDGS(ph)EEDEDNSK	ddPTM_K562_Methotrexat_30min_R1	6	WDGSEEDEDNSK	12	0	A0A087WUT6;O60841	A0A087WUT6	EIF5B	Eukaryotic translation initiation factor 5B	1	WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK	279.77	2.3522999999999992e-141	401876000.0	18578.4	12732.4	30487.7	20400.0	12778.9	12632.5	11802.7	16531.399999999998	16767.6	22663.999999999996	True	False	17761.71578114805	14836.21268620424	24088.74840907192	18611.563673043267	14459.549337653323	15073.551840045438	14449.755920470885	15949.981291913276	15988.077935839046	18559.329981349747	0.9570235455157476	0.7993937658909636	1.2979320068816427	1.0028144168860627	0.7790986717830714	0.8121818974711283	0.7785709901699809	0.8594050166650088	0.8614577116687645	1.0	14.179857007577853	-7.711106087218233	8.058999957498754	0.8362287062918594	1.0201044561435268	0.2823665455772819	0.12856189661910533	0.31912951394659755	44.93522285575499	0.038676881299837415	0.04974821342167039	1.944884937121147e-08	7.711106087218233	0.18387574985166744	
WDGS(ph)EEDEDNSKK	ddPTM_K562_Methotrexat_30min_R1	4	WDGSEEDEDNSKK	13	1	A0A087WUT6;O60841	A0A087WUT6	EIF5B	Eukaryotic translation initiation factor 5B	1	WDGS(1)EEDEDNSKK;WDGS(1)EEDEDNSKK;WDGS(1)EEDEDNSKK;WDGS(0.998)EEDEDNS(0.002)KK	210.14	1.6179000000000003e-17	152844000.0	9437.1	6280.65	18534.6	10148.5	5837.39	5023.96	4634.43	7524.219999999999	8270.7	14064.5	True	False	9022.25638366448	7318.42065970349	14644.440750295504	9258.796761562726	6605.109102358112	5994.769167014814	5673.818899955758	7259.5889178315065	7886.196962233354	11517.282762208506	0.7833667515109624	0.6354294507483412	1.271518729951486	0.8039046147189755	0.5734954362700342	0.5205020394815142	0.49263520025514856	0.6303213238501264	0.6847272160504922	1.0	13.491512765784154	-7.622211428244018	5.260562207083869	0.6189736743275198	0.8957683792876749	0.22934141555880572	0.2000289612988369	0.27004890474151727	11.751494050761625	0.05952725062860825	0.07740833846448764	2.386649104025498e-08	7.622211428244018	0.2767947049601551	
WDQTADQTPGAT(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	WDQTADQTPGATPK	14	0	O75533	O75533	SF3B1	Splicing factor 3B subunit 1	1	WDQTADQT(0.004)PGAT(0.996)PK	140.3	3.3188e-05	18042000.0	2126.3	1521.6	3139.0	2007.9	1574.2	1613.9	1429.6	2127.2	2069.7	3037.8	True	False	2032.830397959733	1773.0185372222331	2480.1667969731	1831.8705244658624	1781.2348924660066	1925.7633338333123	1750.2241914057952	2052.385170291561	1973.480098750331	2487.6249831161435	0.8171771918021549	0.7127354602305236	0.9970018848525549	0.7363933619010189	0.7160383516629296	0.7741373184880099	0.7035723645182895	0.8250380118471973	0.7933189737780473	1.0	11.28055329594336	-10.648318489887439	1.4896787217721135	1.0000144951574679	0.7827555267480003	0.3826490244598155	0.08161070263414968	5.703640390359832	11.957025819888516	0.07884718384916774	0.02272597523823772	2.247405866115295e-11	10.648318489887439	-0.21725896840946757	
WDRVKIVCSQPY(ph)S(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	WDRVKIVCSQPYSK	14	2	M0QYS5;M0QZ96;M0R0D2;M0R1U8;F5H8D7;P18887	M0QYS5;F5H8D7	XRCC1	DNA repair protein XRCC1	2	WDRVKIVCS(0.002)QPY(0.999)S(0.999)K	65.298	0.022605	78052000.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	151.45	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	146.1234176573228	0.0	0.0											0.0														
WEAERDDWLHNR	ddPTM_K562_Methotrexat_30min_R1	2	WEAERDDWLHNR	12	1	Q03701	Q03701	CEBPZ	CCAAT/enhancer-binding protein zeta	0	;	119.03	0.0041109	41063200.0	4663.4	4624.4	5718.4	5279.799999999999	4592.0	4810.8	4063.5	5082.700000000001	4970.0	5894.4	False	True	4458.402519797494	5388.503498639921	4518.185986559726	4816.928131418323	5195.928488250478	5740.419013820749	4974.843314058087	4903.938560098216	4738.945784794487	4826.867042096187	0.9236638343080033	1.1163563138668575	0.9360493974985463	0.9979409189042945	1.0764598326275872	1.1892639601955617	1.0306567947016907	1.0159671930736585	0.981785026076973	1.0	12.236871372403728	-6.2313022989701246	22.667644021814684	1.0399930055198963	0.9236631690859198	0.19836912045902322	0.06904177873809988	5631.29481584193	4235341.948309294	0.01808488501971289	1.6961173577007935	5.870805616334494e-07	6.2313022989701246	-0.11632983643397643	
WEDGS(ph)RDGVSLGAVSSTEEASR	ddPTM_K562_Methotrexat_30min_R1	2	WEDGSRDGVSLGAVSSTEEASR	22	1	H3BS66;A0A2R8Y7R4;B2RUZ4	H3BS66	SMIM1	Small integral membrane protein 1	1	WEDGS(0.99)RDGVS(0.009)LGAVSSTEEASR;WEDGS(1)RDGVSLGAVSSTEEASR	81.89	0.0012380000000000002	38180000.0	1225.73	1277.4	1313.33	1287.3899999999999	1286.01	921.43	1237.63	1384.75	986.4	1637.77	True	False	1171.8483768476617	1488.4686379125142	1037.6799807163682	1174.52651750192	1455.142856092116	1099.4833067067527	1515.200032183515	1336.047557616228	940.5424793000561	1341.1539826842218	0.8737612473865922	1.1098417162609866	0.7737217307736188	0.8757581401288396	1.084993128961787	0.8198039307210774	1.1297733532065817	0.9961925139589314	0.7012934319574766	1.0	10.389259172390306	-5.97051506126852	16.824722978286378	0.9452347360909271	0.6497887960128452	0.021727695042761064	0.13991506423525835	21572731.306966722	326516245.85359895	0.03365065228016065	182219562.42200342	1.0702492661812313e-06	5.97051506126852	-0.2954459400780819	
WEETRTPESQPDT(ph)PPGTPLVSQDEKR	ddPTM_K562_Methotrexat_30min_R1	3	WEETRTPESQPDTPPGTPLVSQDEKR	26	2	A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;M0R3C8;A0A0D9SFL2;M0QYH2;Q96T60-2;Q96T60	A0A0D9SEV0	PNKP	Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase	1	WEET(0.004)RT(0.004)PES(0.034)QPDT(0.894)PPGT(0.064)PLVSQDEKR;WEET(0.002)RT(0.002)PES(0.057)QPDT(0.938)PPGT(0.001)PLVSQDEKR;WEETRTPES(0.001)QPDT(0.999)PPGTPLVSQDEKR	84.025	0.00046123	122392000.0	4250.8	3182.5299999999997	6413.0	5468.799999999999	3067.8199999999997	3187.0099999999998	3144.42	3668.8	4048.3	5804.6	True	False	4063.939921764204	3708.3889887394025	5066.998938830355	4989.358794859755	3471.292102531485	3802.8545774583945	3849.6362282737905	3539.766224504365	3860.0954166164024	4753.330692275982	0.8549667979902982	0.7801664198885683	1.065989148843373	1.0496553086380696	0.7302862618357753	0.8000399769445702	0.8098818444358042	0.7446917653460083	0.8120822359127969	1.0	12.214723059016531	-7.772785655863251	24.999804559080108	0.8022779989826884	0.9356063442111445	0.24018148361640312	0.10412642809204438	302.4143264661849	666322.0616326093	0.03322887777082151	0.03800387865262494	1.687385621682508e-08	7.772785655863251	0.13332834522845616	
WERS(ph)IPLR	ddPTM_K562_Methotrexat_30min_R1	1	WERSIPLR	8	1	Q9H977;Q9H977-4	Q9H977	WDR54	WD repeat-containing protein 54	1	WERS(1)IPLR	78.488	0.026643	35219000.0	164.44	0.0	0.0	0.0	0.0	0.0	0.0	0.0	56.13399999999999	113.5	True	False	157.21141449489645	0.0	0.0	0.0	0.0	0.0	0.0	0.0	53.52434259228445	92.94405016251312	1.6914629201117395	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.5758770195477481	1.0	6.53829060849067	-10.000753164843111	4.2795555797417295	0.9984767993967594	0.17123261476584023	0.1939527612693972	0.5018966533863075	0.26217612848374156	13.966860798249144	0.4744896466582535	0.12437830489457967	9.982672767609222e-11	10.000753164843111	-0.8272441846309191	
WFGMFANLPIGIPYS(ph)IS(ph)FK	ddPTM_K562_Methotrexat_30min_R1	1	WFGMFANLPIGIPYSISFK	19	0	O15121;E7EMA0	O15121	DEGS1	Sphingolipid delta(4)-desaturase DES1	2	WFGMFANLPIGIPY(0.63)S(0.685)IS(0.685)FK	41.386	0.033129	0.0	302.96	294.15	0.0	335.36	154.47	151.28	188.08	199.42	182.85	319.46	True	False	289.64224115406114	342.7532878048896	0.0	305.95950947998955	174.78551253920983	180.5127189679061	230.26172769977745	192.40628556766796	174.3493434103968	261.602698369308	1.1071836909922441	1.3102054754841264	0.0	1.169557926532021	0.6681334467447382	0.6900262118591526	0.8801963020072291	0.7354904470291261	0.6664661507591392	1.0	8.031233611741996														
WFNGQPIHAELS(ph)PVTDFR	ddPTM_K562_Methotrexat_30min_R1	2	WFNGQPIHAELSPVTDFR	18	0	P0DN76;Q01081-4;Q01081-2;Q01081	P0DN76	U2AF1	Splicing factor U2AF 35 kDa subunit	1	WFNGQPIHAELS(0.828)PVT(0.172)DFR;WFNGQPIHAELS(0.889)PVT(0.111)DFR	110.1	0.0005403	8286000.0	2658.37	1859.08	2332.8999999999996	2346.8	2182.3	1711.76	1926.91	3540.7	2849.8	4441.700000000001	True	False	2541.5112378423596	2166.2613710430555	1843.2561709648123	2141.0596876420564	2469.310701199701	2042.5333938425636	2359.068618258071	3416.1715741121347	2717.3134200215945	3637.265089047	0.6987423725303071	0.5955742344890891	0.5067698190366884	0.5886454891862268	0.678892145814614	0.5615574734965847	0.6485830866059231	0.9392143521238937	0.7470759907503904	1.0	11.828638359951542	-9.174666663224263	4.870722310410816	0.8817782760544031	0.6033303879517068	0.7314361096420261	0.07897160581225747	0.11340624532440852	4.585048234762243	0.03777087206847429	0.021107245358595303	6.688570926951294e-10	9.174666663224263	-0.2784478881026963	
WGAATTS(ph)PAASDAR	ddPTM_K562_Methotrexat_30min_R1	2	WGAATTSPAASDAR	14	0	A0A087WXI6;A0A087WX07;Q86W56	A0A087WXI6	PARG	Poly(ADP-ribose) glycohydrolase	1	WGAAT(0.033)T(0.214)S(0.753)PAASDAR;WGAAT(0.011)T(0.052)S(0.937)PAASDAR	100.73	0.0039534999999999995	28645000.0	1984.81	1926.23	2863.2	2381.05	2436.8	2204.45	2096.84	2464.2	2402.3	2604.5	True	False	1897.5601289443894	2244.506767188214	2262.2534479430965	2172.307043318611	2757.2819120576596	2630.428763410897	2567.109746437692	2377.5326892781427	2290.617597346439	2132.79981187899	0.8897038148520112	1.0523757338532445	1.060696571400228	1.01852364728259	1.2927992100808106	1.233321922085832	1.203633708208215	1.1147472332077635	1.0739955923610158	1.0	11.058532842950457	-6.28573656069026	0.9075601160072011	1.1537243103784889	0.7731934018901092	0.4058083838271328	0.08819050042562909	2.1047608939609224	1.403396106514811	0.032505988994651236	0.7913216463411411	5.179209030644445e-07	6.28573656069026	-0.38053090848837967	
WGDRDSEGTWR	ddPTM_K562_Methotrexat_30min_R1	3	WGDRDSEGTWR	11	1	Q14152-2;Q14152	Q14152-2	EIF3A	Eukaryotic translation initiation factor 3 subunit A	0	;;	108.31	0.0091633	136020000.0	7376.400000000001	6123.4	8946.400000000001	9480.1	6149.969999999999	6712.7	6861.2	6569.459999999999	7019.9	8954.6	False	True	7052.142288251969	7135.187769996468	7068.672899789789	8648.99435180478	6958.798851238192	8009.834271654304	8399.99875634683	6338.408368194621	6693.546381223105	7332.835168151893	0.9617210978477964	0.9730462510580012	0.9639754252885134	1.1794884452563796	0.948991582609381	1.0923243313095004	1.1455321937181762	0.8643871330592177	0.9128183339364616	1.0	12.840155394644253	-9.279280189010889	24.996852716047634	0.9164520497219504	1.036656314282846	0.27856875562169015	0.08227227895881131	1093.0697679694247	1531497.0551330964	0.04538843514951926	0.02187041435090068	5.256780110448535e-10	9.279280189010889	0.12020426456089561	
WGDYDSHDIER	ddPTM_K562_Methotrexat_30min_R1	1	WGDYDSHDIER	11	0	Q6P2Q9	Q6P2Q9	PRPF8	Pre-mRNA-processing-splicing factor 8	0		167.18	0.00013989	20519000.0	4586.1	3538.2	5178.4	4885.7	3209.5	3817.5	3448.5	3712.2	4255.2	4616.5	False	True	4384.500535241087	4122.82741088309	4091.5246070230965	4457.378266538603	3631.6055058884804	4555.177846774068	4221.913908829659	3581.639821905012	4057.376680776156	3780.40711520037	1.1597958636813905	1.0905776243796355	1.0822973511428906	1.1790736105157162	0.9606387341951654	1.2049437290651785	1.1167881606862038	0.9474217227832028	1.0732644810825105	1.0	11.884325892508905	-9.240304760370897	24.296395386297842	1.0077573280382985	1.1115337129488643	0.33299470283213883	0.06906437735156841	616.8632045462855	709148.6337505085	0.0310566664963588	0.01790450526667137	5.750362716720521e-10	9.240304760370897	0.10377638491056573	
WGQY(ph)AS(ph)DVQLILRRTGPSLSERPT(ph)SDSVAR	ddPTM_K562_Methotrexat_30min_R1	1	WGQYASDVQLILRRTGPSLSERPTSDSVAR	30	3	Q6IB99;F5GYP8;F5H8C5;F5H0S5;F5H7J1;Q8NHQ8-2;Q8NHQ8	Q6IB99	C12orf2;RASSF8	Ras association domain-containing protein 8	3	WGQY(0.773)AS(0.783)DVQLILRRT(0.138)GPS(0.305)LS(0.023)ERPT(0.364)S(0.319)DS(0.295)VAR	49.193000000000005	0.0051463	76430000.0	1730.1	1625.1	1338.4	1866.9	1727.6	1508.0	1848.5	1787.2	1572.0	1728.7	True	False	1654.046875563247	1893.6201530230367	1057.488130318189	1703.2317755492381	1954.8096812503325	1799.3996576123889	2263.073179780087	1724.3431630053972	1498.918063118095	1415.6156785545065	1.1684293276916826	1.3376654283432516	0.7470164016535874	1.2031738566843355	1.3808901037648864	1.2711074657281038	1.5986494173976118	1.2180870762650313	1.058845339046152	1.0	10.467213930096483	-5.955637116034525	17.793696214513208	1.2168036704042504	0.8707319338713095	0.0	0.2198019931796522	91058420.27035102	843995015.9694889	0.056957602078775864	1085062157.741728	1.1075488333696814e-06	5.955637116034525	-0.3460717365329409	
WGQY(ph)AS(ph)DVQLILRRTGPSLSERPTS(ph)DSVAR	ddPTM_K562_Methotrexat_30min_R1	1	WGQYASDVQLILRRTGPSLSERPTSDSVAR	30	3	Q6IB99;F5GYP8;F5H8C5;F5H0S5;F5H7J1;Q8NHQ8-2;Q8NHQ8	Q6IB99	C12orf2;RASSF8	Ras association domain-containing protein 8	3	WGQY(0.954)AS(0.954)DVQLILRRT(0.076)GPS(0.016)LS(0.002)ERPT(0.29)S(0.354)DS(0.354)VAR	66.88600000000001	8.6763e-05	85366000.0	1212.4	1069.9	1048.0	1395.1	908.27	1187.5	1078.0	1113.2	1258.0	1284.3	True	False	1159.1043476867696	1246.682789809456	828.0391217673807	1272.793749032483	1027.7234250921736	1416.9675685773955	1319.7689411971505	1074.0481250322334	1199.5158545817828	1051.7008248785514	1.1021236460669517	1.1853967975668562	0.7873333387020983	1.2102241615903107	0.9772013112292208	1.3473105041455344	1.2548900884902845	1.0212487236151617	1.1405485535492481	1.0	10.038508647230469														
WGRDDIENIAR	ddPTM_K562_Methotrexat_30min_R1	2	WGRDDIENIAR	11	1	O60264	O60264	SMARCA5	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5	0	;	103.21	0.014519999999999998	39934000.0	4263.0	3233.1000000000004	3943.5	4503.3	3246.0	3108.8	3050.3	4539.0	3769.3	5424.700000000001	False	True	4075.6036243720714	3767.3148216963787	3115.813241116094	4108.5026808243	3672.905895657896	3709.5316018470826	3734.4074223874454	4379.36079727031	3594.066065719487	4442.234263582246	0.9174670633163499	0.8480675709926184	0.701406782316672	0.9248730339383716	0.8268149939251608	0.8350598779218124	0.8406597222938881	0.9858464316419832	0.8090672063794333	1.0	12.117069760842044	-10.77512013164773	0.3872965119033083	1.0201892941845712	0.832440294372323	0.26750938932211377	0.07269098318613285	4.488358656562952	1.0772065214289455	0.24091643661228024	0.05525192119938082	1.678339702754659e-11	10.77512013164773	-0.18774899981224813	
WGS(ph)PQQRPPISENSR	ddPTM_K562_Methotrexat_30min_R1	1	WGSPQQRPPISENSR	15	1	Q9UQC2;Q9UQC2-2	Q9UQC2	GAB2	GRB2-associated-binding protein 2	1	WGS(0.997)PQQRPPIS(0.003)ENSR	104.41	0.021788	0.0	3370.0	2228.0	3812.4	3337.0	2405.1	1954.2	2195.5	2786.0	2973.8	3403.4	True	False	3221.858835124063	2596.1391304752483	3012.229339528592	3044.4503910267335	2721.4128064223055	2331.821492643323	2687.8967628927126	2688.0148008801684	2835.5486870868913	2787.0112803797097	1.1560264781867364	0.9315136787395936	1.0808098843138512	1.092371032890814	0.9764627885006383	0.8366745800632818	0.9644369873259022	0.9644793402177928	1.0174155759787842	1.0	11.444503126398725	-7.8959925829811475	5.9316420943405195	0.949903706716717	1.0560589106203522	0.35458812639374304	0.06916284917857854	0.24359906748347485	12.052563180350067	0.021589451575679857	0.02459315207783788	1.2705958046612332e-08	7.8959925829811475	0.1061552039036352	
WHQPPPS(ph)PLPLR	ddPTM_K562_Methotrexat_30min_R1	4	WHQPPPSPLPLR	12	0	J3QQY0;J3KSZ8;Q68DK7;J3KTC2;Q68DK7-3;Q68DK7-2	J3QQY0	MSL1	Male-specific lethal 1 homolog	1	WHQPPPS(1)PLPLR;WHQPPPS(1)PLPLR;WHQPPPS(1)PLPLR;WHQPPPS(1)PLPLR	104.09	0.0033038000000000004	56548600.0	7368.9	7164.799999999999	7920.9	7953.3	6687.1	6924.2	6082.300000000001	7602.0	7627.7	7625.299999999999	True	False	7044.97197927172	8348.661419223094	6258.411335503101	7256.046537294856	7566.570861014759	8262.203653341985	7446.4106039363905	7334.63335114538	7273.089891886702	6244.284279332254	1.1282272978169228	1.337008541852594	1.002262397984923	1.162030140317506	1.2117595103828147	1.32316263701971	1.192516271013319	1.1746155400743101	1.164759573160315	1.0	12.608320504080233	-10.413932650277337	1.5546459768465377	1.0001036958040466	1.194836511629632	0.29048038452406577	0.08933991161716431	2.532459702581699	7.955183595501451	0.08626260792223746	0.024827389652562523	3.855381416941907e-11	10.413932650277337	0.19473281582558544	
WIDNPTVDDR	ddPTM_K562_Methotrexat_30min_R1	1	WIDNPTVDDR	10	0	P18206-2;P18206	P18206-2	VCL	Vinculin	0		117.02	2.6536999999999997e-05	0.0	1203.8	1402.9	1602.2	1663.4	1240.1	1241.5	1212.0	1375.4	1286.7	1445.7	False	True	1150.882393389421	1634.7053797772558	1265.9201153584897	1517.572304595106	1403.1948863848904	1481.402304327441	1483.8218522550528	1327.0264024158585	1226.88159784609	1183.8697208805747	0.972136015551933	1.3808152628156962	1.0693069457143352	1.2818744139062193	1.1852612341003024	1.25132206542588	1.2533658274082478	1.1209226648932302	1.036331596464451	1.0	10.209294612773538	-9.630473009531919	2.6550081169294124	1.0091495391070593	1.2055010812643523	0.30980160549202684	0.10736387695363955	0.30747248792113835	4.043265251600454	0.0849880916658446	0.026229528909185184	2.3416770008369286e-10	9.630473009531919	0.196351542157293	
WIPLSSDAQAPLAQPES(ph)PTASAGDEPR	ddPTM_K562_Methotrexat_30min_R1	2	WIPLSSDAQAPLAQPESPTASAGDEPR	27	0	Q6GQQ9-2;Q6GQQ9	Q6GQQ9-2	OTUD7B	OTU domain-containing protein 7B	1	WIPLSSDAQAPLAQPES(0.595)PT(0.348)AS(0.057)AGDEPR;WIPLSSDAQAPLAQPES(0.639)PT(0.339)AS(0.022)AGDEPR	93.073	1.8466e-05	23894000.0	2755.1000000000004	2088.2200000000003	2593.6000000000004	2665.2	2626.8	1809.29	2218.48	2773.2	2831.8999999999996	2697.2	True	False	2633.9891028635925	2433.262861329006	2049.2388036411053	2431.5460539899454	2972.2702423641904	2158.909686022229	2716.030612863687	2675.6649841352755	2700.2455871145876	2208.710943597624	1.1925458650434633	1.1016665029809758	0.9277985467411299	1.1008892137009834	1.3457035883214554	0.9774523426346242	1.2296903860311044	1.2114147357721063	1.2225436718832638	1.0	11.108988908640471	-7.53588696188879	24.999364381844263	1.1738892897472497	1.06636554613772	0.10529729149903333	0.1189969439004551	436.2588627889924	838404.271875676	0.034330725650264	0.04434726948398371	2.911474817741868e-08	7.53588696188879	-0.10752374360952976	
WISENQDSADVDPQEHS(ph)FTR	ddPTM_K562_Methotrexat_30min_R1	2	WISENQDSADVDPQEHSFTR	20	0	Q15751	Q15751	HERC1	Probable E3 ubiquitin-protein ligase HERC1	1	WISENQDSADVDPQEHS(0.915)FT(0.085)R;WISENQDSADVDPQEHS(0.916)FT(0.084)R	167.95	7.1881e-13	51776000.0	2785.1	2367.7	2883.3999999999996	2852.0	2359.0	2365.0	2606.3	3070.5	3002.0	3399.4	True	False	2662.67033878458	2758.9221809812598	2278.21374399243	2601.9695880156582	2669.249848384773	2822.0027786825613	3190.8291200761887	2962.5087746240324	2862.437675242064	2783.7357191405026	0.9565097435351002	0.9910862450093129	0.8184015919068078	0.9347042429800175	0.9588732975014317	1.0137466567960962	1.1462399602579296	1.0642205559436968	1.0282720646074337	1.0	11.442806536515556	-8.288198794006583	2.5618974399372108	1.0657363894384722	0.9250284570615694	0.5487713401940331	0.054831491673367205	0.2158046323491522	2.801564819607943	0.02153012784205648	0.01957841335741448	5.149928577308174e-09	8.288198794006583	-0.1407079323769027	
WIVEER	ddPTM_K562_Methotrexat_30min_R1	1	WIVEER	6	0	G3V3W9;O95433-2;O95433	G3V3W9	AHSA1	Activator of 90 kDa heat shock protein ATPase homolog 1	0		119.22	0.013316999999999999	12987000.0	3275.7	3178.4	3454.7	3736.4	2903.9	3325.5	3059.7	3641.1	3279.0	3644.4	False	True	3131.70415021243	3703.5765764374014	2729.605681268865	3408.835613135237	3285.813749353347	3968.1058099403185	3745.9156116706135	3513.0404492048733	3126.560005702441	2984.363845041963	1.049370757997638	1.2409936484756354	0.9146356888767643	1.1422319094229965	1.1010097695735706	1.3296320475577008	1.2551806033617	1.1771488436442563	1.0476470591535658	1.0	11.543207720201009	-5.9640417280554905	14.675953114275176	1.14222575450309	0.7363864626169556	0.040144845464196055	0.11896382911547627	2581768.2704664962	32159374.154338412	0.030340016419619354	26472939.24502793	1.086321242252008e-06	5.9640417280554905	-0.40583929188613443	
WKEPGSGGPQNLS(ph)GPGGR	ddPTM_K562_Methotrexat_30min_R1	2	WKEPGSGGPQNLSGPGGR	18	1	M0QZH1;M0QX70;M0QYR7;M0R2N0;M0QZC7;Q9H0W8-2;Q9H0W8	M0QZH1	SMG9	Protein SMG9	1	WKEPGSGGPQNLS(1)GPGGR;WKEPGSGGPQNLS(1)GPGGR	85.884	0.0043238999999999994	56158000.0	4225.5	3613.5	6036.1	4829.2	3443.3	3524.1	3121.2	4451.9	4482.9	5899.7	True	False	4039.7520794708385	4210.569456001933	4769.205098187108	4405.831533816696	3896.15430391831	4205.082449198822	3821.2085521934555	4295.324153639061	4274.4909574758985	4831.207160738135	0.8361786081749444	0.8715356878545903	0.987166341560573	0.9119525177106154	0.8064556485139496	0.8703999454571826	0.7909428068511211	0.8890788597404713	0.8847666463598347	1.0	12.238168001096279	-10.383956557085153	2.117354262061173	0.9999595319526534	0.8712230463707608	0.35397113096278876	0.05221330661747096	3.1808421536868288	15.981088436037307	0.054151012901344844	0.014883175006398172	4.1308882161477583e-11	10.383956557085153	-0.12873648558189266	
WLAES(ph)PVGLPPEEEDKLTR	ddPTM_K562_Methotrexat_30min_R1	4	WLAESPVGLPPEEEDKLTR	19	1	E9PGC8;P78559;P78559-2	E9PGC8	MAP1A	Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2	1	WLAES(1)PVGLPPEEEDKLTR;WLAES(1)PVGLPPEEEDKLTR;WLAES(1)PVGLPPEEEDKLTR;WLAES(1)PVGLPPEEEDKLTR	135.21	6.5105e-08	334818000.0	10802.9	7759.299999999999	13525.300000000001	10843.900000000001	8369.099999999999	7446.8	7036.799999999999	11179.7	11364.4	14338.599999999999	True	False	10328.017451027223	9041.392439450898	10686.524364160641	9893.232123240878	9469.783342991519	8885.788707100759	8614.981526360023	10786.503614285723	10836.07152449064	11741.740596125195	0.8795985030052099	0.7700214772616064	0.9101311919365023	0.8425694676397186	0.8065059235013735	0.7567692910907172	0.733705659380943	0.9186460496193637	0.9228675625883417	1.0	13.519358669024873	-9.441264699650565	6.0082639989974265	0.9490879521427772	0.8148482381584612	0.5637416583501205	0.054228120519466225	0.17964526047353652	10.41902256040438	0.03232515496995442	0.015015730774272132	3.620222809445487e-10	9.441264699650565	-0.134239713984316	
WLDDLLAS(ph)PPPSGGGAR	ddPTM_K562_Methotrexat_30min_R1	7	WLDDLLASPPPSGGGAR	17	0	Q9C0C2;Q9C0C2-2	Q9C0C2	TNKS1BP1	182 kDa tankyrase-1-binding protein	1	WLDDLLAS(0.994)PPPS(0.006)GGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(0.948)PPPS(0.052)GGGAR;WLDDLLAS(0.875)PPPS(0.125)GGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(0.998)PPPS(0.002)GGGAR	174.87	5.942099999999999e-68	140609000.0	9429.9	8555.37	11042.1	10289.400000000001	8757.7	7934.200000000001	8095.150000000001	10094.5	9789.7	10811.7	True	False	9015.372887043444	9968.999476074521	8724.5141092248	9387.34427732409	9909.491054344773	9467.371859037285	9910.693454853541	9739.470713382938	9334.57898378322	8853.596362484956	1.0182724079498338	1.1259830545602718	0.9854203593686389	1.0602860005116979	1.1192616704703102	1.06932499194938	1.1193974797459467	1.1000581362226618	1.0543262423094322	1.0	13.112047886795036	-6.188575049871144	21.356554086806057	1.073622564828749	1.0182673951650192	0.09937192858843369	0.04624643097891158	54704.72282003936	16028455.213877013	0.011280107988982994	50.1532483439062	6.47776144233215e-07	6.188575049871144	-0.055355169663729775	
WLDES(ph)DAEMELR	ddPTM_K562_Methotrexat_30min_R1	5	WLDESDAEMELR	12	0	H3BPZ1;H3BS72;Q9P035	H3BPZ1	HACD3	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3	1	WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR	195.71	7.3973e-09	161950000.0	17147.2	11916.300000000001	15115.5	14572.1	13482.4	12244.970000000001	13081.2	22034.4	21996.9	23764.9	True	False	16393.429619477556	13885.266032532407	11942.96311552944	13294.586617644787	15255.57191855145	14611.137152171073	16014.992090527046	21259.4376627832	20974.268920230566	19460.84632341064	0.842380097301159	0.7134975427984842	0.6136918670984273	0.6831453471605661	0.7839110213927126	0.7507965948322837	0.8229339990862389	1.0924210237048595	1.0777675632225376	1.0	14.248286831705354	-9.111730718662436	2.848400695195651	1.0665849320567788	0.7259936633552749	0.8441810707027724	0.06229298831273147	0.10512981049423663	1.6332074118727604	0.03674424982449193	0.01920755727962641	7.731598289939971e-10	9.111730718662436	-0.3405912687015039	
WLNSGRGDEASEEGQNGS(ph)SPK	ddPTM_K562_Methotrexat_30min_R1	1	WLNSGRGDEASEEGQNGSSPK	21	1	E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;P35611;P35611-3;H0Y9H2	E7EV99	ADD1	Alpha-adducin	1	WLNSGRGDEASEEGQNGS(0.628)S(0.372)PK	124.76	9.351299999999999e-07	45462000.0	1514.2	1136.3	2280.1	1963.6	1171.3	1064.1	981.12	1805.0	1488.0	2144.6	True	False	1447.6375810518866	1324.054261202435	1801.5381694101193	1791.4542366856751	1325.3464804633684	1269.722265030069	1201.1611350531982	1741.5171269162615	1418.8232047835402	1756.192158401106	0.8243047744671986	0.7539347302449504	1.025820643140952	1.0200787129790356	0.7546705376876335	0.722997343403506	0.6839576918204521	0.9916438349786248	0.8078974718092823	1.0	10.778234994458526	-10.841330249509989	1.1321576319393167	1.000335982781581	0.8423384178006855	0.13142674324887793	0.12012104856410767	15.12357302682399	18.14699381651064	0.14532089308074633	0.0384041525655935	1.4410191440571349e-11	10.841330249509989	-0.15799756498089546	
WLNSGRGDEASEEGQNGSS(ph)PK	ddPTM_K562_Methotrexat_30min_R1	1	WLNSGRGDEASEEGQNGSSPK	21	1	E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;P35611;P35611-3;H0Y9H2	E7EV99	ADD1	Alpha-adducin	1	WLNSGRGDEASEEGQNGS(0.263)S(0.737)PK	106.74	5.0193999999999994e-05	48965000.0	3080.3	2358.3	5218.2	3741.6	2354.8	2596.2	2163.0	2813.1	3191.1	4102.2	True	False	2944.8937002470784	2747.968990753941	4122.97113092228	3413.5797372087573	2664.4974747674705	3097.8789065605356	2648.107810583892	2714.1616785197407	3042.746457516637	3359.251828869262	0.8766516624144673	0.8180300646524968	1.2273480349075494	1.0161726214964306	0.7931818186028498	0.9221931145314861	0.7883028559592258	0.8079661236452578	0.9057809930673871	1.0	11.713924237020002	-7.7507594735416845	24.9981196156788	0.8585368379851113	0.9899989678507982	0.1833948329000451	0.11725955181496096	344.69632335972676	806816.0173175551	0.03601473709629549	0.04601043982113189	1.775172357078926e-08	7.7507594735416845	0.13146212986568695	
WLPS(ph)SPSGVAK	ddPTM_K562_Methotrexat_30min_R1	1	WLPSSPSGVAK	11	0	Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4	Q8IWI9-3	MGA	MAX gene-associated protein	1	WLPS(0.641)S(0.358)PS(0.001)GVAK	178.71	0.00085468	58550000.0	9569.3	7299.7	11581.0	9522.6	7106.4	6097.1	6735.6	8100.8	7981.6	9190.6	True	False	9148.645029956293	8505.851351315152	9150.306363729038	8687.76844279029	8041.016160475438	7275.278284103778	8246.229759116446	7815.89027242285	7610.537158131927	7526.093281265138	1.2155901724909797	1.1301814943602873	1.2158109156721573	1.1543530113315144	1.068418349330337	0.9666739451946843	1.0956852979279381	1.038505633710269	1.0112201475202276	1.0	12.877685455490234	-7.790116993401272	3.1132665070095884	1.028453120928728	1.1816920448421016	0.7879655996196975	0.0385316829498756	0.11252493245765652	2.243977517168387	0.012019180124499568	0.014699463021936945	1.6213732612194164e-08	7.790116993401272	0.15323892391337357	
WLREAEEES(ph)DHN	ddPTM_K562_Methotrexat_30min_R1	3	WLREAEEESDHN	12	1	Q04637-9;Q04637;E7EX73;E9PGM1;Q04637-3;Q04637-8;E7EUU4;Q04637-7;Q04637-4;Q04637-5;Q04637-6	Q04637-9	EIF4G1	Eukaryotic translation initiation factor 4 gamma 1	1	WLREAEEES(1)DHN;WLREAEEES(1)DHN;WLREAEEES(1)DHN	133.04	0.0002174	502711000.0	11382.9	10226.3	12582.3	14385.400000000001	10038.599999999999	10058.3	10300.3	11988.3	12677.8	14157.599999999999	True	False	10882.52134549961	11916.022257620758	9941.447177303158	13124.254316774346	11358.85185586918	12001.924122123804	12610.404475893325	11566.664693966879	12088.4118451645	11593.521450051063	0.9386726364707488	1.0278173296145732	0.857500218560373	1.1320334700132497	0.9797585578124022	1.0352268009191412	1.0877113162056369	0.9976834686337631	1.042686805492671	1.0	13.50103122086215	-7.261053127543931	24.999999984948747	1.0385700561201485	0.9499787942463153	0.37984387211724147	0.057039912432115696	38.93684450650878	2520073.467018546	0.014936646362271154	0.02399130317256348	5.482098979233086e-08	7.261053127543931	-0.08859126187383326	
WPT(ph)GDNIHAEHQVR	ddPTM_K562_Methotrexat_30min_R1	1	WPTGDNIHAEHQVR	14	0	Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2;E9PR38;Q14671-4	Q5T1Z4	PUM1	Pumilio homolog 1	1	WPT(1)GDNIHAEHQVR	108.77	0.0047225	12624000.0	2270.7	2324.6	2859.3	2813.5	2126.3	1774.5	2266.5	2552.5	2653.5	2692.6	True	False	2170.8827468594095	2708.700638555996	2259.172004646444	2566.8448232405494	2405.945719635671	2117.3970108973385	2774.8203202442887	2462.7271282292268	2530.1393641754858	2204.9440481725346	0.9845523058322704	1.228466836063698	1.0245938016063734	1.1641315004650388	1.0911595337894073	0.9602951207094097	1.258453847182231	1.1169113929536414	1.1474846113544124	1.0	11.106526331624845	-8.765594901978757	24.99991668862126	1.1404550292682016	1.0849067802439787	0.0661091376533317	0.0950878375553394	304.60243324644404	1832483.0428632025	0.03691318014040404	0.025899959109280345	1.7155567858925892e-09	8.765594901978757	-0.05554824902422295	
WQGSPAELDS(ph)DTQGAR	ddPTM_K562_Methotrexat_30min_R1	1	WQGSPAELDSDTQGAR	16	0	O43182-4;O43182	O43182-4	ARHGAP6	Rho GTPase-activating protein 6	1	WQGS(0.001)PAELDS(0.971)DT(0.029)QGAR	123.63	0.00028164	25707000.0	1703.6	1469.4	1857.6	2112.1	1304.3	1233.6	1270.9	1590.1	2019.3	1882.1	True	False	1628.711783833043	1712.1933744705248	1467.715145605999	1926.935472246797	1475.8383116779403	1471.9757411343787	1555.9316765931894	1534.1752817227407	1925.4231837495988	1541.2334520781137	1.0567586510901241	1.1109240927530466	0.9522990456942219	1.2502554169510298	0.9575696074387704	0.9550634520355422	1.0095366633103229	0.995420440462244	1.2492741973342618	1.0	10.589869689439103	-5.075581473862064	13.11090605139713	1.051177039440057	1.05712567158689	0.0	0.10849626187240277	0.0	0.0	0.02403985779644543	0.0	8.402693573610254e-06	5.075581473862064	0.005948632146832944	
WQGSPAELDSDT(ph)QGAR	ddPTM_K562_Methotrexat_30min_R1	1	WQGSPAELDSDTQGAR	16	0	O43182-4;O43182	O43182-4	ARHGAP6	Rho GTPase-activating protein 6	1	WQGS(0.215)PAELDS(0.019)DT(0.766)QGAR	149.35	3.175e-22	0.0	1052.5	815.01	932.84	884.94	881.72	736.37	828.84	864.1	1014.0	1244.9	True	False	1006.2333602279161	949.6765496986678	737.0496320128661	807.3586841579856	997.6816347256565	878.663080819652	1014.7284686659054	833.7091132234574	966.8593613242681	1019.4365466723578	0.9870485451129455	0.9315700450396835	0.7229970657994769	0.7919656076617655	0.9786598665530349	0.8619105168318536	0.9953816860678376	0.8178136402357249	0.9484252496933604	1.0	9.99355626438142	-7.7651237181840225	24.99874506201207	0.9240839290927002	0.8539507823810983	0.14866218122992447	0.08620172874210949	210.70623681112326	1429671.1042550202	0.027400733250554702	0.032290738745264135	1.717419073466318e-08	7.7651237181840225	-0.07013314671160187	
WQHWHEECER	ddPTM_K562_Methotrexat_30min_R1	2	WQHWHEECER	10	0	J3KT10;Q9BW27;J3QLV0;J3QLD4;J3QL54;Q9BW27-2;Q9BW27-3	J3KT10	NUP85	Nuclear pore complex protein Nup85	0	;	147.73	1.3133e-07	29061000.0	3130.6	2887.8	3240.8999999999996	3373.2	3231.8	2786.9	2931.7	2943.64	2751.63	3238.3	False	True	2992.982572474597	3364.9598657928277	2560.6793795189924	3077.47679323086	3656.8383467613025	3325.4289826259756	3589.2083533466466	2840.110512728964	2623.7073218941764	2651.812490231422	1.1286554322750781	1.2689282813880893	0.9656336520594349	1.1605182510330097	1.3789958227559944	1.2540211628371083	1.3534925137310212	1.0710072915001276	0.9894015250170298	1.0	11.372763050694322	-11.921181132637937	7.200658512905442	0.9999999969081614	1.1813105521498832	0.13015880727216278	0.1343157042807519	7.0332562065312955e-09	9.940029837519774e-10	0.1372371679042763	0.03328490179989623	1.1989991283143489e-12	11.921181132637937	0.1813105552417218	
WQRPS(ph)SPPPFLPAASEEAEPAEGLR	ddPTM_K562_Methotrexat_30min_R1	1	WQRPSSPPPFLPAASEEAEPAEGLR	25	1	H3BLU1;Q4KMQ1;Q4KMQ1-2;Q4KMQ1-4;Q4KMQ1-3	H3BLU1	TPRN	Taperin	1	WQRPS(0.558)S(0.442)PPPFLPAASEEAEPAEGLR	53.481	0.013487	18265000.0	786.59	909.03	1354.6	1079.5	675.32	936.23	837.31	1348.5	1174.6	1472.7	True	False	752.012445436272	1059.2317566319186	1070.2879717042886	984.8619110318724	764.1364169610871	1117.1431972456553	1025.0980817753123	1301.072490662924	1119.9931023781894	1205.9797592452255	0.6235697072618586	0.8783163635307192	0.8874841915872111	0.8166487899003032	0.633622920370844	0.9263366061341117	0.8500126755169425	1.0788510177626973	0.9286997512123655	1.0	10.235989978399598	-8.850812973847487	1.806492969586576	0.9984041808158451	0.7874984735289249	0.46778770728659713	0.09970189194778425	0.3314539928199363	2.1928610650810567	0.05570355144122247	0.032153557686745764	1.4098958303646767e-09	8.850812973847487	-0.21090570728692026	
WQRPS(ph)SPPPFLPAASEEAEPAEGLRVPGLAK	ddPTM_K562_Methotrexat_30min_R1	1	WQRPSSPPPFLPAASEEAEPAEGLRVPGLAK	31	2	H3BLU1;Q4KMQ1;Q4KMQ1-2;Q4KMQ1-4;Q4KMQ1-3	H3BLU1	TPRN	Taperin	1	WQRPS(0.5)S(0.5)PPPFLPAAS(0.001)EEAEPAEGLRVPGLAK	59.56100000000001	0.00062002	11328000.0	798.77	627.31	768.37	817.11	703.93	467.38	502.84	1044.5	801.75	907.77	True	False	763.6570272201924	730.9623150531546	607.0996373973306	745.4752349451172	796.5091334351392	557.6945702751183	615.6146701220549	1007.7643429717639	764.476817496777	743.3640565288507	1.0272988322654448	0.9833167324048377	0.8166922143534774	1.0028400329525275	1.0714926642464397	0.75023074545638	0.8281469418856173	1.355680751740317	1.02840164355876	1.0	9.537925121825312	-9.241276582063007	24.998578512330877	1.1440309510880686	0.9255625724728805	0.33128425286254326	0.13112885053332257	844.2810461434979	1046773.2305174797	0.06172432454496167	0.035577932845611095	5.737509503950267e-10	9.241276582063007	-0.21846837861518809	
WQS(ph)PVTK	ddPTM_K562_Methotrexat_30min_R1	3	WQSPVTK	7	0	A9Z1X7;M0R088	A9Z1X7;M0R088	SRRM1		1	WQS(1)PVTK;WQS(1)PVTK;WQS(0.999)PVT(0.001)K	94.40899999999999	0.011767	789170000.0	17777.9	13811.7	28004.5	21067.600000000002	14561.400000000001	13083.599999999999	13024.4	16870.1	17275.3	22043.6	True	False	16996.40480265641	16093.848666241025	22126.738154136096	19220.63621755913	16476.47933118696	15611.820530727753	15945.45324464579	16276.769020936297	16472.175073653958	18051.290433148668	0.9415617606730703	0.8915622251962068	1.2257704365280966	1.0647790687730072	0.9127590845765915	0.8648589744065516	0.8833414599193528	0.9016955924129552	0.9125206386023857	1.0	14.139814354332746	-7.782421870962867	12.755285733033396	0.9037446188667493	1.034879452724585	0.2981779594896755	0.08828208130605884	1.2085482922651727	731.9225338163508	0.028889568729461433	0.033094999256453275	1.6503578719445987e-08	7.782421870962867	0.13113483385783575	
WQSPVT(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	WQSPVTK	7	0	A9Z1X7;M0R088	A9Z1X7;M0R088	SRRM1		1	WQS(0.066)PVT(0.934)K	100.02	0.024205	362220000.0	5419.0	4116.4	7478.0	5681.6	3988.1	3486.0	3775.2	4829.7	4883.8	6087.6	True	False	5180.787248527391	4796.565133163518	5908.469992916479	5183.502949253069	4512.60505313409	4159.620163419623	4621.884700192468	4659.836713499981	4656.75320397974	4985.076649949913	1.0392592957581595	0.9621848308414096	1.1852315235666122	1.0398040618503128	0.9052228019762604	0.8344144845719507	0.9271441594060356	0.9347572847343881	0.9341387366684779	1.0	12.28339997216469	-7.719868148868407	5.700078870821773	0.9150234901837501	1.0608184983072024	0.5139423324967722	0.06371196057867395	0.15017754525221705	11.829707297319421	0.019471365267950312	0.02477013561064302	1.9060393007079147e-08	7.719868148868407	0.14579500812345236	
WRPEDAEEAEHR	ddPTM_K562_Methotrexat_30min_R1	1	WRPEDAEEAEHR	12	1	H0YAE8;E7EUV9;F8W8D3;Q14493	H0YAE8	SLBP	Histone RNA hairpin-binding protein	0		144.57	3.4081e-08	12442000.0	5839.5	4719.8	5940.9	5699.3	5180.9	4851.1	4609.3	6157.8	6421.0	6322.2	False	True	5582.802572019869	5499.666727117183	4693.986277202129	5199.651217734093	5862.2791604479335	5788.506418463838	5643.052857755125	5941.226683725736	6122.489111502093	5177.188316629429	1.078346436440719	1.0622883292562362	0.9066670922756996	1.004338822490291	1.132328747173046	1.1180791704776933	1.0899840826012281	1.1475778589397976	1.1825896098537314	1.0	12.33795308084551	-7.758432656826902	24.99781380714714	1.1183659825768741	1.0088483708368428	0.3774635226197235	0.06175455547868915	78.79256340275055	655071.8583019515	0.018828013461397296	0.023254239921553437	1.744083780036231e-08	7.758432656826902	-0.10951761174003138	
WRPHS(ph)PDGPR	ddPTM_K562_Methotrexat_30min_R1	1	WRPHSPDGPR	10	1	I1E4Y6;Q6Y7W6;C9JH78;C9IYH5;Q6Y7W6-3	I1E4Y6;Q6Y7W6-3	GIGYF2	PERQ amino acid-rich with GYF domain-containing protein 2	1	WRPHS(1)PDGPR	79.744	0.022132	197120000.0	3443.7	3353.6	4235.7	3806.0	2665.1	3388.4	2995.7	2930.9	3336.7	3660.0	True	False	3292.319071369953	3907.7253985465873	3346.6844542653557	3472.3338891962094	3015.6073636838746	4043.16034473065	3667.56198250863	2827.8185857500675	3181.577545296532	2997.1385338748714	1.0984874520009107	1.3038187439051931	1.1166265477687385	1.1585496799532247	1.006162154201503	1.349006827356566	1.2236878412713865	0.9435061321953986	1.0615383671248615	1.0	11.54937005437116	-9.258405659684211	24.99855447926703	1.001891683497953	1.1808916059598906	0.41352994259750486	0.0970182973943843	261.428941805096	2154255.0597190643	0.048094949491016635	0.026217639019950265	5.515620033106161e-10	9.258405659684211	0.17899992246193763	
WRRPDYDGGSPNLSYHVERR	ddPTM_K562_Methotrexat_30min_R1	2	WRRPDYDGGSPNLSYHVERR	20	3	A0A0A0MRA3;A0A0A0MTS7;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42;Q8WZ42-8;Q8WZ42-13;Q8WZ42-12	A0A0A0MRA3	TTN	Titin	0	;	72.207	0.0044504	18236100.0	3195.2	2906.7	4274.200000000001	3894.1000000000004	3073.6000000000004	3099.0	2998.0	3443.8	3434.8	3776.7	False	True	3054.742833824453	3386.9827695477575	3377.1038303989867	3552.710298980283	3477.8322738429174	3697.837890544295	3670.377816056639	3322.6796020355764	3275.1168977086745	3092.70303302875	0.987725882893088	1.0951529239555902	1.091958650517996	1.148739552759787	1.1245283613399513	1.1956653616764892	1.1867863732335657	1.0743610254689102	1.058982017585207	1.0	11.594652594537529	-5.970868405104082	1.45010129763718	1.1215870605567682	0.8398271000390973	0.2797485460509159	0.05665450930633825	3.042299956146316	3.401298510769115	0.016333794457231564	1.5129760728676278	1.0693788609620535e-06	5.970868405104082	-0.2817599605176708	
WSSTVTS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	1	WSSTVTSPR	9	0	M0QZ79;M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63	M0QZ79	VRK3	Inactive serine/threonine-protein kinase VRK3	1	WSST(0.002)VT(0.102)S(0.896)PR	79.986	0.032298	39205000.0	2261.3	2007.7	2672.5	2611.3	2432.8	1966.0	2064.2	2383.4	2321.6	2523.5	True	False	2161.8959596041664	2339.4382999349896	2111.5787718734023	2382.3713833047987	2752.7558419459438	2345.901675640556	2527.1493955650803	2299.5744710760205	2213.66932273217	2066.4696967850373	1.046178399309504	1.1320941718016142	1.0218290523004254	1.1528702245240923	1.3321055935292028	1.135221909757618	1.2229307787560384	1.1128033837871623	1.0712324144777647	1.0	11.012952492498181	-7.3677954421798715	7.661004826830037	1.1623440288359586	1.0735433746802794	0.13124807800436133	0.08787427353358235	0.48855364388098016	31.220758211162085	0.02480923627329457	0.03687021662151666	4.2875041934662934e-08	7.3677954421798715	-0.08880065415567917	
WTDGWMDGWMDEWSPTPALR	ddPTM_K562_Methotrexat_30min_R1	1	WTDGWMDGWMDEWSPTPALR	20	0	Q8NES3-4	Q8NES3-4			0		44.538999999999994	0.03361	14029000.0	1285.5	1005.3	2524.6	1754.4	969.47	1377.6	817.82	682.3	884.19	1144.7	False	True	1228.9909592142385	1171.4087378217089	1994.7209607003151	1600.594475881721	1096.9722978014352	1643.8017031345016	1001.2369531445771	658.3031222686789	843.0841998908327	937.3837376302097	1.3110862818265208	1.249657627710862	2.1279662539731583	1.707512528357029	1.1702489106272311	1.753605953619571	1.068118544146919	0.7022770887117461	0.8994013508514936	1.0	9.87249595595526	-8.918801798504688	4.818173040736128	0.8552330352399705	1.5531700504771775	0.573215023244235	0.27237920905794316	0.15494649684230305	6.443107254492207	0.12380170301894028	0.08157201183573079	1.2055860151342325e-09	8.918801798504688	0.697937015237207	
WTEGQSNHSTGYES(ph)DNHTTPILCGAQYR	ddPTM_K562_Methotrexat_30min_R1	2	WTEGQSNHSTGYESDNHTTPILCGAQYR	28	0	H0Y7K5;A0A0A0MT54;P19544-7;H0YED9;P19544-6;P19544-4;P19544	H0Y7K5	WT1	Wilms tumor protein	1	WTEGQS(0.027)NHS(0.017)T(0.249)GY(0.049)ES(0.429)DNHT(0.165)T(0.064)PILCGAQYR;WTEGQSNHSTGY(0.004)ES(0.983)DNHT(0.01)T(0.003)PILCGAQYR	113.3	2.0489e-12	106553000.0	385.17999999999995	193.05	345.11	507.80999999999995	123.96	410.33000000000004	431.68	495.12	373.90999999999997	501.72	True	False	368.2479484015096	224.94823121106225	272.67612720719546	463.291085725887	140.2629127620926	489.6204651910424	528.4952286975752	477.70634896331273	356.5270057127779	410.85364623379826	0.8962995747443271	0.5475142627383532	0.6636818967210231	1.1276304591008763	0.3413938614098981	1.191715029620113	1.2863345221398677	1.1627165861672106	0.867771307327998	1.0	8.682480760190325	-8.299228217017372	24.998627185129607	1.1234165464390602	0.7260213299384192	0.4318058995468228	0.22075134542943028	529.8007652265348	350479.7667006911	0.07599378413323218	0.06702170572351168	5.020786833120293e-09	8.299228217017372	-0.397395216500641	
WTKPSSFS(ph)DSER	ddPTM_K562_Methotrexat_30min_R1	1	WTKPSSFSDSER	12	1	Q8NC56;H0Y9B7;Q8NC56-2	Q8NC56	LEMD2	LEM domain-containing protein 2	1	WTKPS(0.089)S(0.041)FS(0.544)DS(0.326)ER	113.54	0.0030399	44875000.0	1813.5	1315.2	2445.9	1906.0	1239.6	1219.6	1093.1	1369.8	1691.7	1878.6	True	False	1733.7807114235873	1532.514445422372	1932.53901520118	1738.9039392559043	1402.6291276209254	1455.2704392732564	1338.255500577556	1321.6233575899694	1613.0532362448366	1538.3673359938066	1.1270264720639955	0.9961953881660823	1.2562272806921846	1.1303567740747358	0.9117647617724589	0.9459837096275394	0.8699193419320909	0.859107786981308	1.0485488078845497	1.0	10.587184320172218	-7.758945473445031	24.99585868551481	0.9290491894374472	1.1272743512767027	0.5761156567936216	0.0788086084986603	46.02275262067	461270.7269775144	0.023776075245476386	0.029270324417847257	1.7420255745139382e-08	7.758945473445031	0.19822516183925554	
Y(ph)AINNCRSIDMDNYMLS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	YAINNCRSIDMDNYMLSR	18	1	Q15751	Q15751	HERC1	Probable E3 ubiquitin-protein ligase HERC1	2	Y(0.999)AINNCRS(0.013)IDMDNY(0.009)MLS(0.979)R	44.005	0.033638999999999995	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
Y(ph)APSSLY(ph)PS(ph)S(ph)LQAERLK	ddPTM_K562_Methotrexat_30min_R1	1	YAPSSLYPSSLQAERLK	17	1	Q96JN0-3;A0A1P0AZG4	Q96JN0-3	LCOR	Ligand-dependent corepressor	4	Y(0.478)APS(0.245)S(0.278)LY(0.999)PS(1)S(1)LQAERLK	58.672	0.021825	18324000.0	1311.6	901.4	1496.9	1082.7	1039.7	709.56	644.89	986.95	1163.4	1283.8	True	False	1253.9436344654957	1050.3410288197435	1182.721146348847	987.7813720001932	1176.4387737878974	846.6724277556012	789.5229985979872	952.2384090914142	1109.3137879335832	1051.2913797236504	1.1927650684200568	0.999096015698182	1.1250174491678464	0.9395885774882394	1.119041586831183	0.8053641874036515	0.7510030176462843	0.9057797176475717	1.055191557097315	1.0	10.037946871965051	-8.25556028572656	24.931170611217897	0.8880498849226224	1.0661237880221948	0.3975022563985946	0.10450499941489359	481.1103267323559	2040222.2951951153	0.035453013333673906	0.034549685927642924	5.551875445132377e-09	8.25556028572656	0.17807390309957238	
Y(ph)ETLQMALS(ph)Y(ph)IMALTR	ddPTM_K562_Methotrexat_30min_R1	1	YETLQMALSYIMALTR	16	0	Q8N100	Q8N100	ATOH7	Protein atonal homolog 7	3	Y(0.898)ET(0.11)LQMALS(0.99)Y(0.968)IMALT(0.034)R	48.405	0.033339	0.0	0.0	0.0	69.782	75.329	148.19	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	55.13571182745359	68.72502352581746	167.679582463815	0.0	0.0	0.0	0.0	0.0											0.0														
Y(ph)FT(ph)RSKSLVMGEQS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	YFTRSKSLVMGEQSR	15	2	Q7Z5H3-5;D6RBJ8	Q7Z5H3-5	ARHGAP22	Rho GTPase-activating protein 22	3	Y(0.665)FT(0.59)RS(0.351)KS(0.394)LVMGEQS(1)R	62.861000000000004	0.028993	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
Y(ph)GAVDPLLALLAVPDMSS(ph)LACGY(ph)LR	ddPTM_K562_Methotrexat_30min_R1	1	YGAVDPLLALLAVPDMSSLACGYLR	25	0	P52292	P52292	KPNA2	Importin subunit alpha-1	3	Y(0.996)GAVDPLLALLAVPDMS(0.196)S(0.81)LACGY(0.999)LR	46.415	0.016721	13193000.0	361.33	494.9	492.51	467.09	496.05	355.87	205.54	417.7	329.83	460.72	True	False	345.4463658443257	576.6738131383308	389.13888154737845	426.1409449040089	561.2892697292355	424.636840951274	251.6375771555308	403.00925424538605	314.4962752915022	377.27914353192097	0.9156253977105895	1.5285070034345523	1.0314349155493512	1.1295110058686662	1.4877293891061478	1.12552429210905	0.6669798250701345	1.0681991335979804	0.8335904082778781	1.0	8.55948853812114	-8.537584572007704	23.29802504721046	0.8976433822056405	1.2290564879820773	0.3731164878764345	0.2001648120518393	108.92116290199601	172557.31356795927	0.07247113735476479	0.05616900685554817	2.9001163917276047e-09	8.537584572007704	0.3314131057764368	
Y(ph)GELMSIRKT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	YGELMSIRKTR	11	2	K7EKE0	K7EKE0	ZNF569		2	Y(0.991)GELMS(0.011)IRKT(0.999)R	43.628	0.031579	10683000.0	180.46	121.34	147.21	111.94	0.0	164.06	121.46	115.58	0.0	187.92	True	False	172.5271944767028	141.38937257265107	116.31263274367952	102.12639399806194	0.0	195.76227309541693	148.70049684397577	111.51498588863238	0.0	153.88586701796882	1.1211373586149875	0.9187937483312969	0.7558370043825923	0.6636502492209823	0.0	1.2721263939888536	0.9663037920604653	0.7246603476303064	0.0	1.0	7.265716929437227	-6.5985944044376925	1.9557017026605004	0.6637249127928344	1.1283843903027537	0.1300486051201064	0.38237426729683727	0.9378156048593798	6.03526441603535	0.10877488605096547	0.6182667527439105	2.520029330609032e-07	6.5985944044376925	0.4646594775099193	
Y(ph)GLS(ph)PGPVTES(ph)T(ph)RPVY(ph)LKK	ddPTM_K562_Methotrexat_30min_R1	1	YGLSPGPVTESTRPVYLKK	19	2	Q9Y2U8	Q9Y2U8	LEMD3	Inner nuclear membrane protein Man1	5	Y(0.97)GLS(0.972)PGPVT(0.106)ES(0.967)T(0.993)RPVY(0.992)LKK	40.52	0.033267000000000005	522170.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0											0.0														
Y(ph)GRPPDS(ph)HHS(ph)RRGPPPR	ddPTM_K562_Methotrexat_30min_R1	1	YGRPPDSHHSRRGPPPR	17	3	J3QL05;J3KP15;Q01130-2;Q01130	J3QL05	SRSF2	Serine/arginine-rich splicing factor 2	3	Y(1)GRPPDS(1)HHS(1)RRGPPPR	55.452	0.033642	13426000.0	0.0	0.0	0.0	0.0	0.0	149.97	65.729	0.0	0.0	0.0	True	False	0.0	0.0	0.0	0.0	0.0	178.9495800080438	80.47040142481215	0.0	0.0	0.0											0.0														
Y(ph)GRPPY(ph)RGGLDR	ddPTM_K562_Methotrexat_30min_R1	1	YGRPPYRGGLDR	12	2	F8WE45;A0A075B6E9;A0A494C1A4;Q96NW7-2;Q96NW7	F8WE45	LRRC7	Leucine-rich repeat-containing protein 7	2	Y(1)GRPPY(1)RGGLDR	43.282	0.033173	4305500.0	297.08	440.43	508.51	407.24	406.23	335.07	433.9	387.2	315.1	319.46	True	False	284.02071891354797	513.2035714700239	401.7807002003155	371.53790148088933	459.656365370643	399.8175353290339	531.2131202091316	373.581956532951	300.4510697764071	261.602698369308	1.085694913255796	1.9617671173465026	1.5358431037019213	1.4202372674168078	1.757078073872694	1.5283387282366874	2.0306102479845642	1.4280508529218625	1.1485014170314727	1.0	8.031233611741996	-9.716803520595365	3.1087834799396665	1.0341007344899635	1.626603936765992	0.4116726786994769	0.25653662948906253	0.2263038320628597	4.1192215731269455	0.21579149339371675	0.06351952642590873	1.919536963028726e-10	9.716803520595365	0.5925032022760284	
Y(ph)HQPQRASGS(ph)S(ph)Y(ph)GGVK	ddPTM_K562_Methotrexat_30min_R1	1	YHQPQRASGSSYGGVK	16	1	Q6PIW4-2;Q6PIW4	Q6PIW4-2	FIGNL1	Fidgetin-like protein 1	4	Y(0.996)HQPQRAS(0.62)GS(0.744)S(0.689)Y(0.952)GGVK	66.24600000000001	0.023066999999999997	0.0	1329.2	1014.3	1300.4	1424.0	1080.5	1168.5	1139.8	836.33	1172.3	1765.2	True	False	1270.7699595391402	1181.8958348478661	1027.4638110174635	1299.1601309026287	1222.6046889274055	1394.2960874801572	1395.4291643566903	806.9157998636435	1117.8000288761725	1445.505174862274	0.8791182360590425	0.8176351461076407	0.7107991232998242	0.8987585471815492	0.8457975178427802	0.9645735703526651	0.9653574325596206	0.5582240824150114	0.7732936888189799	1.0	10.497358058288379	-11.88053255000838	4.155983017176485	1.0000036920720874	0.8235828668960858	0.1716951594889592	0.11614959802030789	48160068.819889046	98404319.52502991	2802.686282700808	0.031131911886406766	1.3166412278640778e-12	11.88053255000838	-0.17642082517600155	
Y(ph)IRLHPT(ph)HYS(ph)IRS(ph)T(ph)LR	ddPTM_K562_Methotrexat_30min_R1	1	YIRLHPTHYSIRSTLR	16	2	A0A2R8Y707;P00451-2;P00451	A0A2R8Y707	F8	Coagulation factor VIII;Factor VIIIa heavy chain, 200 kDa isoform;Factor VIIIa heavy chain, 92 kDa isoform;Factor VIII B chain;Factor VIIIa light chain	5	Y(1)IRLHPT(1)HY(0.694)S(0.735)IRS(0.801)T(0.771)LR	50.226000000000006	0.032438	12432000.0	1155.8	841.31	1178.5	1136.7	846.3	837.69	834.27	987.02	998.09	1064.6	True	False	1104.9924159158431	980.3221776751041	931.1489551553993	1037.0472758406015	957.6032838864071	999.561736860294	1021.376284390117	952.3059471517385	951.6890137516154	871.790623815079	1.267497476722381	1.124492683099843	1.068087829484286	1.189560024518658	1.0984326485364109	1.1465616967593326	1.1715843879123522	1.0923562620853995	1.0916485997370444	1.0	9.767837877237879	-15.999999995269025	0.10969563245842225	0.5498914536556964	1.2170802558002116	0.4765643902529839	0.05057000418232035	161.8035117601727	1.178937878727177	16.268920178445157	0.6524519911922392	1.0000000108934719e-16	15.999999995269025	0.6671888021445153	
Y(ph)LASRAGHT(ph)LPRVMVY(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	YLASRAGHTLPRVMVYR	17	2	A0A6I8PL69;Q9BZD7	A0A6I8PL69	PRRG3	Transmembrane gamma-carboxyglutamic acid protein 3	3	Y(0.916)LAS(0.084)RAGHT(1)LPRVMVY(1)R	52.254	0.025664	34782000.0	1591.8	1166.2	1715.3	1587.2	1258.6	1136.2	1511.1	1241.6	1002.9	1990.2	True	False	1521.8263779675035	1358.8947279893343	1355.2819709614384	1448.0526402869746	1424.12796065158	1355.7545696148522	1850.002641041757	1197.9322242544206	956.2753979014872	1629.7554945676966	0.9337758841986159	0.8338028204346015	0.8315860725604953	0.8885091322677701	0.8738292126631789	0.8318760538828404	1.1351412203905362	0.7350380030914883	0.5867600392138242	1.0	10.670439823821571														
Y(ph)LS(ph)T(ph)Y(ph)LK	ddPTM_K562_Methotrexat_30min_R1	1	YLSTYLK	7	0	A6NND8	A6NND8	CRYZL1		4	Y(1)LS(1)T(1)Y(1)LK	61.691	0.025730000000000003	3969600.0	4006.7	3428.9	5068.2	4572.8	4190.3	3452.1	3615.1	3992.6	4206.2	4621.1	True	False	3830.5702654871166	3995.467443665429	4004.4540810509898	4171.909723730014	4741.397897281358	4119.169468198762	4425.878199741945	3852.177994972775	4010.6546800810015	3784.1740106254574	1.0122606029034036	1.0558360774231543	1.058210872387743	1.102462442798837	1.2529545110685036	1.088525384042246	1.1695757613985687	1.0179706282418228	1.0598494331443578	1.0	11.885762715436208	-5.34539167487066	16.94956153200556	1.0888464672844265	1.0847767594169937	0.0	0.07435435043139577	0.0	0.0	0.01760579563091883	0.0	4.51448615146393e-06	5.34539167487066	-0.00406970786743277	
Y(ph)RDQIPS(ph)PGLMVFPK	ddPTM_K562_Methotrexat_30min_R1	1	YRDQIPSPGLMVFPK	15	1	C9JXZ1;C9JA36;P54709-2;P54709	C9JXZ1	ATP1B3	Sodium/potassium-transporting ATPase subunit beta-3	2	Y(1)RDQIPS(1)PGLMVFPK	68.277	0.028401999999999997	0.0	1075.9	982.28	1286.9	863.01	953.38	1082.7	773.82	945.39	909.12	1095.2	True	False	1028.604724246285	1144.5850740948051	1016.7972765290476	787.3512532094637	1078.7661807770564	1291.9164517884176	947.3688330957132	912.1400978478472	866.8552096322659	896.8486672950161	1.146910021451733	1.2762298878661285	1.1337445364063576	0.8779087062527423	1.2028408137470077	1.440506630494267	1.0563307586251658	1.0170501792670903	0.9665568353318588	1.0	9.808720757570292	-8.986159752628074	24.999048291779204	1.00242011198241	1.1759159622125424	0.29217478454737855	0.1318067607653054	336.5147128686151	607831.0846192209	0.059896150144749125	0.04036151414894392	1.032381580516737e-09	8.986159752628074	0.17349585023013225	
Y(ph)RIQEQES(ph)SGEEDSDLSPEER	ddPTM_K562_Methotrexat_30min_R1	1	YRIQEQESSGEEDSDLSPEER	21	1	E7EMN6;Q6NXS1;P41236	E7EMN6	PPP1R2;PPP1R2P3	Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2	2	Y(0.928)RIQEQES(0.946)S(0.07)GEEDS(0.03)DLS(0.026)PEER	75.539	0.012771	23332000.0	1577.2	1568.9	1723.2	1482.1	1153.5	1441.3	1395.5	1637.9	1724.6	1666.7	True	False	1507.8681764859566	1828.1340582597027	1361.5238689213274	1352.166594108697	1305.20546846623	1719.810826602611	1708.476398367925	1580.2941286294426	1644.4237224258686	1364.8444793467897	1.1047912046415849	1.3394449594247118	0.9975670411715688	0.9907111136617115	0.9563034383894766	1.2600782379437891	1.251773681339574	1.1578565562178678	1.2048432970274274	1.0	10.414520853640331	-8.281970191962795	24.81559657659466	1.1895803396105893	1.083009778282206	0.1344103966864164	0.12005227172113513	1548.285841994956	1871406.9429100316	0.044622243218749996	0.03940238426005949	5.2243204517524265e-09	8.281970191962795	-0.10657056132838338	
Y(ph)RQRS(ph)PSPAPAPAPAAAAGPPTR	ddPTM_K562_Methotrexat_30min_R1	1	YRQRSPSPAPAPAPAAAAGPPTR	23	2	Q9H7N4	Q9H7N4	SCAF1	Splicing factor, arginine/serine-rich 19	2	Y(0.682)RQRS(0.951)PS(0.367)PAPAPAPAAAAGPPTR	74.859	0.0013538	67005000.0	713.52	669.48	643.27	1001.8	600.08	604.23	745.74	865.93	794.28	913.02	True	False	682.1545151447249	780.1001907857129	508.2564178046783	913.9737493948403	679.0010381597009	720.9888959675957	912.9911783008934	835.474751086204	757.3540961663113	747.6632306553104	0.9123820554166231	1.0433844527862794	0.6797932504440571	1.2224404142407304	0.9081642781397333	0.964323062049828	1.2211262248387909	1.117447958961321	1.0129615381814443	1.0	9.546244774234129	-7.786997657265887	0.9765516721713875	1.0810165497753603	0.9160189605412494	0.14976323773783962	0.14088988562715096	1.0254919443376718	2.1051349551687117	0.06629391029691026	0.10099578028138341	1.6330607571631235e-08	7.786997657265887	-0.1649975892341109	
Y(ph)RS(ph)AAREYDIAVVQVSS(ph)RVTFSDDIR	ddPTM_K562_Methotrexat_30min_R1	1	YRSAAREYDIAVVQVSSRVTFSDDIR	26	3	H0YAL9;A0A0A0MR82;Q6ZMR5-2;Q6ZMR5	H0YAL9	TMPRSS11A	Transmembrane protease serine;Transmembrane protease serine 11A	3	Y(0.986)RS(0.971)AAREY(0.041)DIAVVQVS(0.086)S(0.39)RVT(0.39)FS(0.136)DDIR	40.402	0.033953	0.0	0.0	211.31	308.58	172.3	66.236	251.91	209.0	224.12	173.69	69.766	True	False	0.0	246.22538584413144	243.81327499520836	157.19472651300765	74.9471949799126	300.58804227396354	255.87357023210055	216.2375725675747	165.6151898110572	57.130701353637804	0.0	4.309861073120766	4.267640151763751	2.7514930289403536	1.3118549782189979	5.261409980131875	4.478740224949256	3.7849626810822574	2.89888249027266	1.0	5.836194335875289	-8.257324544001662	24.999162191049624	3.720980530706147	2.736196868931567	0.06599800847947201	1.5927426968401186	1006.3703998012936	6114084.4595202375	0.5349941489374144	0.5166934497612681	5.529367505815414e-09	8.257324544001662	-0.9847836617745798	
Y(ph)RYS(ph)LEK	ddPTM_K562_Methotrexat_30min_R1	1	YRYSLEK	7	1	C9IZQ6;H7BXZ5;O60229-2;O60229	C9IZQ6	KALRN	Kalirin	2	Y(0.655)RY(0.578)S(0.767)LEK	78.616	0.026739999999999996	1738200.0	277.64	220.6	301.27	161.24	271.43	218.39	244.43	315.56	285.66	326.7	True	False	265.4352780367494	257.05040044113105	238.03754409814775	147.10433954124986	307.12780260579876	260.5907766750464	299.24964962599216	304.4615759388892	272.37972895058203	267.53146421227353	0.9921647116099178	0.9608230613098044	0.8897553220479376	0.5498580885593686	1.1480062859526212	0.9740565560852311	1.1185587104945225	1.1380402556961053	1.0181222225676665	1.0	8.063564765750456														
Y(ph)S(ph)LT(ph)VAVKTLK	ddPTM_K562_Methotrexat_30min_R1	1	YSLTVAVKTLK	11	1	P00519-2;P00519;P42684-8;P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5	P00519-2;P42684-2	ABL1;ABL2	Tyrosine-protein kinase ABL1;Abelson tyrosine-protein kinase 2	3	Y(1)S(1)LT(1)VAVKTLK	90.149	0.0065164	11118000.0	1633.9	2473.6	2246.1	2027.7	2092.8	2499.0	2162.6	1654.1	1753.6	1425.2	True	False	1562.0757123766193	2882.3203559890367	1774.6743047726272	1849.9346892073454	2368.039882450043	2981.8963822104533	2647.61810040163	1595.924365447194	1672.0755187556556	1167.0824695296362	1.3384450140924278	2.469680105083478	1.520607455862023	1.5850933738666437	2.0290253210678615	2.5550005762765275	2.2685784162868	1.3674478086286328	1.4326969707886577	1.0	10.188690794445693	-9.3680806252582	5.839530710382326	1.2786132976446347	1.9779753132295803	0.40153210986587295	0.39225928285929235	0.2585782123356456	11.912820541010149	0.2281960238724375	0.10694926791336572	4.284689692414098e-10	9.3680806252582	0.6993620155849456	
Y(ph)SLTVAVK	ddPTM_K562_Methotrexat_30min_R1	3	YSLTVAVK	8	0	P00519-2;P00519;P42684-8;P42684-2;P42684-6;P42684-3;P42684;P42684-4;P42684-7;P42684-10;P42684-5	P00519-2;P42684-2	ABL1;ABL2	Tyrosine-protein kinase ABL1;Abelson tyrosine-protein kinase 2	1	Y(0.63)S(0.344)LT(0.026)VAVK;Y(0.653)S(0.347)LTVAVK;Y(0.6)S(0.293)LT(0.107)VAVK	116.25	0.0062071999999999995	40063000.0	6908.700000000001	5411.7	9448.5	7407.299999999999	5328.5	4830.200000000001	4901.4	6805.5	6181.199999999999	8300.8	True	False	6605.001820243806	6305.89144182805	7465.38897139227	6757.913509575167	6029.291147570271	5763.5677892568765	6000.663718352234	6566.146707605876	5893.837361161301	6797.444683603429	0.9716889401360149	0.9276855841194136	1.0982640269806143	0.9941844066604002	0.886993779017272	0.8479021246262678	0.8827822803511497	0.9659728049636825	0.8670666162798234	1.0	12.730776790564093	-7.7524309688667135	21.438112385738894	0.9024404967449715	1.0001015243823077	0.35751699743701004	0.058418521404814294	35.7073922534084	84972.61683483244	0.017514890552389695	0.022182888429644228	1.7683532752531494e-08	7.7524309688667135	0.0976610276373362	
Y(ph)SYLTEPGMIERS(ph)T(ph)GATR	ddPTM_K562_Methotrexat_30min_R1	1	YSYLTEPGMIERSTGATR	18	1	Q12955	Q12955	ANK3	Ankyrin-3	3	Y(0.397)S(0.09)Y(0.397)LT(0.116)EPGMIERS(0.948)T(0.953)GAT(0.099)R	59.975	0.022808000000000002	227210000.0	153.1	218.45	228.28	204.8	107.3	214.44	184.8	137.81	286.67	276.81	True	False	146.36990731676383	254.54514948488247	180.36714763078024	186.84550197251275	121.41183074679363	255.8774950785152	226.2461042052258	132.9631441885484	273.34277427103325	226.67702665625788	0.6457200779271074	1.122941981548421	0.7957010478362071	0.8242807166155958	0.5356159489903112	1.1288197081680362	0.9980989584282595	0.5865752967996136	1.2058688888907176	1.0	7.8244943734932395	-8.289092918428166	24.998902902594192	0.9589226358070955	0.8064278254354358	0.17822720117847746	0.2077241618478889	1733.1463179108266	1566763.9972367757	0.07280355910729717	0.06422195151476287	5.139336823775694e-09	8.289092918428166	-0.15249481037165968	
Y(ph)T(ph)S(ph)IALVSVGIFICT(ph)FMS(ph)AK	ddPTM_K562_Methotrexat_30min_R1	1	YTSIALVSVGIFICTFMSAK	20	0	Q969S0-2;Q969S0-3;Q969S0	Q969S0-2	SLC35B4	UDP-xylose and UDP-N-acetylglucosamine transporter	5	Y(0.999)T(0.999)S(0.999)IALVS(0.063)VGIFICT(0.97)FMS(0.97)AK	50.18899999999999	0.026330000000000003	13285000.0	1249.2	942.61	1866.4	1214.8	1406.9	1164.5	1043.9	1431.1	1185.9	1382.7	True	False	1194.2866637498457	1098.360280869513	1474.668145865114	1108.3003700986746	1591.9320100434666	1389.5231440912653	1278.021148159282	1380.7674018447985	1130.767767844624	1132.279631363056	1.0547630025916341	0.9700433094846805	1.30238865472647	0.9788221384539835	1.40595305783879	1.2271907977524381	1.128715127217099	1.2194579533172463	0.9986647613570403	1.0	10.145014579370198	-6.738575808078061	24.999676639911982	1.1694184815442914	1.0124030711452279	0.15431860020863863	0.13375471025693875	387.1642210971194	423330.00866240554	0.0324009416856392	0.08560019503625205	1.825678040850063e-07	6.738575808078061	-0.15701541039906353	
Y(ph)T(ph)VT(ph)LGGTSVTVK	ddPTM_K562_Methotrexat_30min_R1	1	YTVTLGGTSVTVK	13	0	K7EK00;Q96ND0	K7EK00	FAM210A	Protein FAM210A	3	Y(1)T(1)VT(0.516)LGGT(0.241)S(0.209)VT(0.035)VK	55.18600000000001	0.034026	0.0	154.51	371.41	395.5	352.98	202.47	230.09	324.22	229.52	227.19	393.35	True	False	147.7179254050502	432.77918960943117	312.4899548272892	322.03479143680454	229.0983538798072	274.5516360875561	396.93458823278314	221.44765150682554	216.6279864884224	322.1105033605687	0.45859394171849027	1.343573665230595	0.9701327698634207	0.9997649504658361	0.7112414885253083	0.8523523238862675	1.232293216432178	0.6874896943641055	0.6725269254754175	1.0	8.331411894578489														
Y(ph)VAVVHPLQARSMVT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	YVAVVHPLQARSMVTR	16	1	Q9HB89	Q9HB89	NMUR1	Neuromedin-U receptor 1	2	Y(1)VAVVHPLQARS(0.142)MVT(0.858)R	60.49	0.030012999999999998	51689000.0	1733.1	1171.4	1519.4	1609.3	1592.3	1627.6	1564.6	1712.8	1770.6	1720.4	True	False	1656.9149991553463	1364.9539396044456	1200.49870382954	1468.2151675994378	1801.715359721525	1942.1106649402677	1915.5013779193514	1652.559853175717	1688.2851924662211	1408.8188889831508	1.1761022031378816	0.9688640252329624	0.8521313230659685	1.0421603366342977	1.2788835909362037	1.3785382068109784	1.3596505504706222	1.1730108576046223	1.1983692195416134	1.0	10.460270442257043	-7.689459185375755	4.946924816371304	1.253835476849575	0.9897263436093918	0.4242565153118254	0.12502280507125954	0.17895308508924018	8.115246531272712	0.03821859104191713	0.04915035264403388	2.0442820468546762e-08	7.689459185375755	-0.26410913324018315	
Y(ph)WS(ph)QFDENIRIILKRYDLEQGLGDLLT(ph)ER	ddPTM_K562_Methotrexat_30min_R1	1	YWSQFDENIRIILKRYDLEQGLGDLLTER	29	3	C9J0A5;C9JXC9;Q5VTR2	C9J0A5	RNF20	E3 ubiquitin-protein ligase BRE1A	3	Y(0.999)WS(0.999)QFDENIRIILKRY(0.002)DLEQGLGDLLT(1)ER	52.971000000000004	0.0037058	30664000.0	0.0	0.0	60.611000000000004	73.538	0.0	57.283	0.0	64.998	0.0	67.922	True	False	0.0	0.0	47.889579398323214	67.09103771511059	0.0	68.35212903647914	0.0	62.71198349878289	0.0	55.620667622363136	0.0	0.0	0.861003318469131	1.2062249624658516	0.0	1.2288980330217598	0.0	1.1274942603092486	0.0	1.0	5.797549156538735	-6.751386325576306	24.86187420604822	0.6726242454634843	4.898727981237081e-07	0.24213514749939347	0.4796883192162533	252.97549147639552	625612.0544275533	0.11270773057065166	0.2907052219746775	1.7726119567951136e-07	6.751386325576306	-0.6726237555906862	
Y(ph)Y(ph)AT(ph)ITGQFGLVK	ddPTM_K562_Methotrexat_30min_R1	2	YYATITGQFGLVK	13	0	Q6ZRK6-2;Q6ZRK6	Q6ZRK6-2	CCDC73	Coiled-coil domain-containing protein 73	3	Y(1)Y(1)AT(0.5)IT(0.5)GQFGLVK;Y(1)Y(1)AT(0.5)IT(0.5)GQFGLVK	107.39	0.0061105	79367000.0	2287.7	2293.9	2325.3	2167.85	2510.1	2244.0	1776.9099999999999	2511.8	2698.8	2223.62	True	False	2187.135447214636	2672.9279853667726	1837.2513071046667	1977.797956304258	2840.222146854863	2677.62124116857	2175.427299909673	2423.458570298206	2573.3333770630506	1820.9008706816508	1.2011282340679457	1.4679151558460002	1.0089793116617574	1.0861645398433322	1.5597895484511637	1.4704925920356158	1.1946983687779258	1.3309118630884003	1.4132199168534245	1.0	10.830436669212576	-5.968018226846376	17.229684474515025	1.2916646045304307	0.8791362276479844	0.012973616625038598	0.19179746521073346	38771836.57919906	547622109.7085387	0.048403478785660294	482303008.2220473	1.0764200365548892e-06	5.968018226846376	-0.41252837688244637	
Y(ph)YTPVLAK	ddPTM_K562_Methotrexat_30min_R1	1	YYTPVLAK	8	0	K7EK35;P42229-2;P42229;K7EM17	K7EK35	STAT5A	Signal transducer and activator of transcription;Signal transducer and activator of transcription 5A	1	Y(0.898)Y(0.102)TPVLAK	112.17	0.007951699999999999	11600000.0	2502.5	1448.5	2925.1	2466.4	1685.7	1793.0	1297.1	2365.7	2559.2	2979.5	True	False	2392.4930964088935	1687.8400047097837	2311.161483856647	2250.174541333035	1907.3990968301023	2139.4718740709654	1588.0076935313768	2282.496990108476	2440.223350592768	2439.883678054695	0.9805767045076569	0.6917706855826375	0.9472424872727222	0.9222466470725712	0.7817582100269881	0.8768745384520765	0.6508538533269284	0.9354941838572802	1.0001392166934548	1.0	11.252596653313391	-9.511601672579939	24.31475851259761	0.9893187290878054	0.8342932117250428	0.31016390032384655	0.10032903012296371	450.71898822077185	971821.5205916377	0.05795563124587432	0.025157539722999642	3.078919452006731e-10	9.511601672579939	-0.1550255173627626	
YADSPGASS(ph)PEQPK	ddPTM_K562_Methotrexat_30min_R1	3	YADSPGASSPEQPK	14	0	A0A0U1RRL5;P32519-2;P32519	A0A0U1RRL5	ELF1	ETS-related transcription factor Elf-1	1	YADS(0.001)PGAS(0.175)S(0.824)PEQPK;YADS(0.004)PGAS(0.25)S(0.745)PEQPK;YADSPGAS(0.143)S(0.857)PEQPK	182.89	3.9500000000000005e-05	44341000.0	12505.5	9301.4	17204.6	12659.0	8657.1	8335.7	7874.4	10718.6	10845.099999999999	14552.0	True	False	11955.773193662906	10838.298253232706	13593.589574770109	11549.205124365424	9795.660391035108	9946.456051697345	9640.434648017475	10341.62076263969	10340.913668143801	11916.491788236917	1.003296390088966	0.90952089304769	1.1407375439295564	0.9691782891812126	0.8220255227049845	0.8346798897235639	0.8089993950680856	0.8678410514114713	0.8677817139396335	1.0	13.54067194885124	-7.630750562403591	5.148161416785044	0.8564002871252533	1.0141275356083987	0.4742430691971117	0.07221146641343175	0.1683393130548354	6.972308654382632	0.02101863248507853	0.027316901377781224	2.3401809386880908e-08	7.630750562403591	0.15772724848314545	
YADSPGASS(ph)PEQPKR	ddPTM_K562_Methotrexat_30min_R1	1	YADSPGASSPEQPKR	15	1	A0A0U1RRL5;P32519-2;P32519	A0A0U1RRL5	ELF1	ETS-related transcription factor Elf-1	1	YADSPGAS(0.226)S(0.774)PEQPKR	132.25	0.00011537	13079000.0	1709.3	1245.8	2677.9	2053.1	1300.5	1021.3	1318.3	1656.4	1604.4	2358.5	True	False	1634.1612186580303	1451.6472750206756	2115.845385668767	1873.1079106433888	1471.5385450718084	1218.6517707689218	1613.9623331912842	1598.1434731435422	1529.811794189994	1931.352795667729	0.8461225842961797	0.7516220124448034	1.0955250591268868	0.9698424414457105	0.7619211510049626	0.6309835124388011	0.8356641711507126	0.827473611619991	0.7920933956869803	1.0	10.915396006729353	-7.767894344927749	24.990560226951864	0.7919264317302075	0.9168916719800584	0.15789101900531044	0.11845260091912543	259.0092727618065	1002758.3989574085	0.037681820425818434	0.04374091620011548	1.7064974948672774e-08	7.767894344927749	0.1249652402498509	
YAHVVLR	ddPTM_K562_Methotrexat_30min_R1	2	YAHVVLR	7	0	P62269	P62269	RPS18	40S ribosomal protein S18	0	;	137.5	5.696699999999999e-07	18768600.0	12690.3	9674.0	11964.400000000001	12718.8	10345.4	9360.0	10447.2	12289.4	12806.7	13620.2	False	True	12132.449606936172	11272.464070115597	9453.235943200054	11603.762551210919	11706.001433437823	11168.687530007934	12790.250540329194	11857.174836301772	12211.319312299302	11153.449797563531	1.0877755158396376	1.010670624310163	0.847561616789194	1.0403743022849987	1.0495408726361055	1.0013661900775965	1.1467528677201937	1.0630948317794886	1.0948468441546095	1.0	13.445202388892852	-7.958435814228911	1.593863492775764	1.0730103566569096	0.9859773727950844	0.16997125414362968	0.06936033618459644	0.6050843066099405	3.147459020674552	0.02777076256735342	0.03188128729501168	1.1004344700094005e-08	7.958435814228911	-0.08703298386182523	
YCT(ph)EMQLKDQQV	ddPTM_K562_Methotrexat_30min_R1	1	YCTEMQLKDQQV	12	1	I3L235	I3L235	TBC1D16		1	Y(0.024)CT(0.976)EMQLKDQQV	76.52199999999999	0.025644999999999998	0.0	321.31	265.63	349.02	334.18	423.32	383.77	0.0	297.16	245.07	432.42	True	False	307.1855971257307	309.5208425620019	275.7654716405068	304.88295824792135	478.9939999229516	457.9281210887978	0.0	286.7087143681086	233.6767491910633	354.10454776452787	0.8674997230761428	0.8740945139395013	0.778768511676628	0.8609970139402506	1.3526909014494573	1.2932003386562279	0.0	0.8096724997690905	0.6599089186125151	1.0	8.468031562154216	-8.725789932816268	24.999945059610596	0.6015316063715167	0.9976500000418568	0.28952654077062245	0.2965707613106936	230.9429538625701	161953.50289669764	0.1160252810299042	0.089869440930509	1.880226057653969e-09	8.725789932816268	0.3961183936703401	
YDDYS(ph)SSRDGYGGSR	ddPTM_K562_Methotrexat_30min_R1	1	YDDYSSSRDGYGGSR	15	1	P38159;P38159-2;H3BUY5;Q96E39	P38159;Q96E39	RBMX;RBMXL1	RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1	1	YDDYS(0.696)S(0.151)S(0.151)RDGYGGS(0.001)R	108.36	0.0035774	5064100.0	2213.7	1535.6	1771.6	2043.2	1330.8	1394.3	1360.9	1638.9	1757.3	1986.7	True	False	2116.3883986095366	1789.3317992629231	1399.7653703464623	1864.0758282726474	1505.823526168061	1663.7287417831267	1666.1164676022286	1581.2589580626366	1675.60350656325	1626.8893784833897	1.3008803343362318	1.0998484733676022	0.8603936990794938	1.1457913813478617	0.9255844595726674	1.0226440493047408	1.024111712595608	0.9719523521240944	1.0299431102840393	1.0	10.667900441917684	-6.36839151341269	3.4753159832605016	1.000127734322169	1.308912848001807	0.6254588323590193	0.07111594819368731	0.1484271588272845	2.9003968450902984	0.016614010639880723	0.09861220957513951	4.2816236101465757e-07	6.36839151341269	0.308785113679638	
YDILPLS(ph)PVSR	ddPTM_K562_Methotrexat_30min_R1	1	YDILPLSPVSR	11	0	I3L1D9;I3L3K5;I3L4B2;O95476;I3L4W0;I3L0X6	I3L1D9	CTDNEP1	CTD nuclear envelope phosphatase 1	1	YDILPLS(0.987)PVS(0.013)R	124.38	0.0019763	7335700.0	6209.2	5271.3	7569.7	6467.8	5582.4	5199.5	5059.1	6142.3	5862.8	6570.8	True	False	5936.251002686153	6142.292728220012	5980.923416071125	5900.778015907318	6316.583447911472	6204.2297876363555	6193.731957709188	5926.27182751122	5590.239707664614	5380.76444764618	1.1032356202254814	1.1415278977519565	1.1115378631167334	1.09664306499955	1.173919339783526	1.15303872674642	1.1510877344609725	1.1013810184728812	1.0389303902924183	1.0	12.393595436344023	-9.786558643521191	2.2660669259305997	1.0019420389191276	1.1333776894588228	0.7965539375595725	0.022994511786685993	0.1285009519646416	1.2690238708272372	0.022986240977348544	0.00655234727858816	1.634712398235467e-10	9.786558643521191	0.1314356505396952	
YDS(ph)SNQVK	ddPTM_K562_Methotrexat_30min_R1	2	YDSSNQVK	8	0	O95983-2;O95983;A0A087WZ12;A0A087WT34;A0A087X1H1;A0A0A0MTS6;K7EIE8	O95983-2	MBD3	Methyl-CpG-binding domain protein 3	1	Y(0.021)DS(0.927)S(0.052)NQVK;Y(0.062)DS(0.773)S(0.165)NQVK	103.22	0.014491	71681000.0	6428.6	4144.3	8303.0	7130.1	3951.6	4014.1	3910.4	4407.7	5243.2	6245.0	True	False	6146.006441388298	4829.075133944599	6560.313767208555	6505.015203194402	4471.304663364678	4789.768014338126	4787.406741797157	4252.6786926918585	4999.444776425442	5113.969984712724	1.2018072964371433	0.9442908637282256	1.2828221101843402	1.272008874248373	0.8743314248481755	0.9366046395767397	0.936142909737099	0.8315806908144674	0.9776054203232255	1.0	12.320227977695074	-7.770211926078762	24.999849165801894	0.918656147004964	1.1664214636147716	0.6082825218430288	0.09775409801734306	132.40651274531007	377328.8462219655	0.030851815241257255	0.035506350335128105	1.6974151493717994e-08	7.770211926078762	0.2477653166098076	
YDSDRYR	ddPTM_K562_Methotrexat_30min_R1	1	YDSDRYR	7	1	E7EX17;P23588-2;P23588;F8VX11	E7EX17	EIF4B	Eukaryotic translation initiation factor 4B	0		36.556	0.033963	10932000.0	0.0	0.0	0.0	0.0	0.0	130.3	0.0	0.0	122.81	0.0	False	True	0.0	0.0	0.0	0.0	0.0	155.4786308931661	0.0	0.0	117.10058990555554	0.0											0.0														
YEAVS(ph)PERLELER	ddPTM_K562_Methotrexat_30min_R1	1	YEAVSPERLELER	13	1	Q92585	Q92585	MAML1	Mastermind-like protein 1	1	YEAVS(1)PERLELER	92.65	0.031449	5592400.0	855.54	839.03	1125.7	958.6	821.61	914.63	786.7	961.36	1151.8	1090.5	True	False	817.9314859946708	977.6654464284776	889.430953600707	874.5610263225134	929.6661161218375	1091.3693029456367	963.1375009645627	927.5484238959642	1098.2530694016687	892.9998828389474	0.9159368346100721	1.094810274017471	0.9960034381786318	0.9793517817070537	1.0410596171259552	1.2221382375505476	1.0785415759547916	1.0386881809515842	1.229846823619056	1.0	9.802516175840505	-8.012883903849893	24.05369620049305	1.1160040116626369	1.0043457364471846	0.33205185301030316	0.0785856350896026	446.38636859329466	833385.8026167279	0.024260123318174304	0.025445677042860215	9.707694398769619e-09	8.012883903849893	-0.11165827521545224	
YEDHTIFHDISLR	ddPTM_K562_Methotrexat_30min_R1	1	YEDHTIFHDISLR	13	0	P82675	P82675	MRPS5	28S ribosomal protein S5, mitochondrial	0		124.48	0.00051953	5883700.0	1784.4	1502.3	1758.3	1848.9	1703.1	1360.7	1587.3	1724.7	1836.3	2127.7	False	True	1705.9599125802301	1750.5295402661425	1389.256858591207	1686.809807602435	1927.0875018160698	1623.636017316432	1943.2924307627422	1664.041323430733	1750.9308138064614	1742.3529121654547	0.9791127277768348	1.0046928656322132	0.7973452731023315	0.9681217828057642	1.106025931004426	0.9318640362580292	1.1153265318376593	0.9550541178036123	1.0049231711791073	1.0	10.766821154904303	-7.526198138834276	24.891209908193883	1.018907904036878	0.9261343737448523	0.2396004325127069	0.07393098134071152	130.38634387741203	977721.0881435187	0.021284734307421307	0.02761953897864444	2.9771578462707392e-08	7.526198138834276	-0.09277353029202573	
YEGSYALTSEEAERS(ph)DGDPVQPAVLQVHQTS	ddPTM_K562_Methotrexat_30min_R1	1	YEGSYALTSEEAERSDGDPVQPAVLQVHQTS	31	1	O95810	O95810	SDPR	Serum deprivation-response protein	1	Y(0.007)EGS(0.008)Y(0.021)ALT(0.046)S(0.046)EEAERS(0.87)DGDPVQPAVLQVHQT(0.001)S(0.001)	43.34	0.024746999999999998	40761000.0	1304.0	1168.5	1377.3	1407.0	978.17	1113.0	1140.9	1509.3	1342.1	1328.3	True	False	1246.6777213655128	1361.5747638960177	1088.2235519181422	1283.6504945084262	1106.8165002944183	1328.0714979592778	1396.7758673579112	1456.2170635206169	1279.7060639381655	1087.731998509834	1.146125813227367	1.2517557318910737	1.0004519067279272	1.1801165142397168	1.0175452242011171	1.2209547018739018	1.2841176588272292	1.338764572078047	1.1764902252497225	1.0	10.087107425764394	-8.482688843829647	24.01997386143738	1.2315681864386654	1.1229404343847305	0.10833495695896767	0.1083612271214584	540.000778134863	322738.2154993704	0.036756054562930796	0.032409657929679515	3.29087325509196e-09	8.482688843829647	-0.10862775205393493	
YEPQS(ph)PGYEPR	ddPTM_K562_Methotrexat_30min_R1	4	YEPQSPGYEPR	11	0	H3BS42;Q9H5H4	H3BS42	ZNF768	Zinc finger protein 768	1	YEPQS(1)PGYEPR;YEPQS(1)PGYEPR;YEPQS(1)PGYEPR;YEPQS(1)PGYEPR	171.36	1.8320999999999998e-07	259671000.0	6081.46	5101.51	6758.6	5655.6	5780.299999999999	5710.5	5459.67	6031.57	6103.1	6729.8	True	False	5814.1263001346	5944.447816656546	5340.062221733799	5159.782328885464	6540.510766688641	6813.9733055673405	6684.139976981304	5819.43626437358	5819.368213114533	5510.968006904677	1.0550099896878544	1.0786576531035497	0.9689880643551639	0.9362751375839574	1.1868170452984035	1.2364385525428803	1.2128794739157918	1.0559735162828787	1.0559611679515217	1.0	12.428090036507893	-7.768766555926585	24.998919624177056	1.137475042883569	1.0117455862190996	0.324351524245177	0.07998355919540237	200.15605431574292	682892.115389116	0.026584568359053196	0.030748277865216705	1.7030737068296876e-08	7.768766555926585	-0.12572945666446933	
YESQEPLAGQES(ph)PLPLATR	ddPTM_K562_Methotrexat_30min_R1	4	YESQEPLAGQESPLPLATR	19	0	Q9C0C2;Q9C0C2-2	Q9C0C2	TNKS1BP1	182 kDa tankyrase-1-binding protein	1	YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(0.996)PLPLAT(0.004)R;YESQEPLAGQES(1)PLPLATR	155.16	7.229300000000001e-15	120790000.0	7811.5	6725.9	9348.2	7758.1	7132.7	6464.5	6798.3	9526.3	8852.4	9473.1	True	False	7468.1158132260025	7837.240654247518	7386.140570711669	7077.959418227306	8070.775071459971	7713.673134373539	8322.991830186073	9191.254629441759	8440.853856200143	7757.429793784168	0.9627049179626497	1.010288312312836	0.9521375980263458	0.9124103738455609	1.0403929247193289	0.9943593869910765	1.0729058530255826	1.1848324604634486	1.0880992906907885	1.0	12.921363019810507	-8.751442231632293	2.4989407132532113	1.1067958452965587	0.9748955964021356	0.49409411980483964	0.05303837573821458	0.21519967571790347	2.7480301228332626	0.02434977372741411	0.016334890437912454	1.7723837858898295e-09	8.751442231632293	-0.1319002488944231	
YEWDVAEAR	ddPTM_K562_Methotrexat_30min_R1	1	YEWDVAEAR	9	0	P13639	P13639	EEF2	Elongation factor 2	0		146.79	2.7881e-06	23269000.0	2856.0	2703.1	3536.7	2724.5	2617.8	2273.8	2189.1	3273.7	3134.0	3141.3	False	True	2730.45365967784	3149.741330156036	2794.3950018651676	2485.6473150591373	2962.0865846128268	2713.1796694158165	2680.0613999765155	3158.5621154491764	2988.301024053505	2572.3801301806384	1.0614502995271158	1.2244462990525642	1.0863071787407015	0.9662830488760576	1.151496448701313	1.0547351216032332	1.0418605588390684	1.2278753355272476	1.161687181841068	1.0	11.328888135494381	-9.235925346142608	24.95329404729169	1.1460860040861476	1.0862694265101631	0.049458239032990736	0.08342704201357251	1774.1954843472085	1735207.2544632729	0.039213655621729675	0.022627175029541362	5.808642576814583e-10	9.235925346142608	-0.059816577575984464	
YEYDPDIS(ph)PPR	ddPTM_K562_Methotrexat_30min_R1	3	YEYDPDISPPR	11	0	Q9BRD0;H7C462	Q9BRD0	BUD13	BUD13 homolog	1	YEYDPDIS(1)PPR;YEYDPDIS(1)PPR;YEYDPDIS(1)PPR	171.32	1.0422e-07	62592000.0	4720.6	4135.9	5470.4	3912.6000000000004	4059.2000000000003	4114.5	3888.4000000000005	4634.9	4880.1	4739.0	True	False	4513.088076286843	4819.28717672019	4322.237797439196	3569.588432703385	4593.055949369848	4909.568893399324	4760.472681772726	4471.88793991367	4653.225216172147	3880.721178151097	1.1629508715277057	1.241853499770436	1.1137717962769105	0.9198260500652753	1.1835573179617431	1.2651176593259927	1.226697941757509	1.1523342529968166	1.1990619790904682	1.0	11.922109066832355	-7.944678689206388	24.99999894207225	1.1865232054381194	1.1108886056069835	0.07101186569649054	0.10014170295713175	209.54991760150105	94695.34137388505	0.032192027877745714	0.03650232524515494	1.135850858965499e-08	7.944678689206388	-0.07563459983113585	
YFAES(ph)DEEEDDVDFAMFN	ddPTM_K562_Methotrexat_30min_R1	8	YFAESDEEEDDVDFAMFN	18	0	Q02880-2;Q02880	Q02880-2	TOP2B	DNA topoisomerase 2-beta	1	YFAES(1)DEEEDDVDFAMFN;YFAES(1)DEEEDDVDFAMFN;YFAES(1)DEEEDDVDFAMFN;YFAES(1)DEEEDDVDFAMFN;YFAES(1)DEEEDDVDFAMFN;YFAES(1)DEEEDDVDFAMFN;YFAES(1)DEEEDDVDFAMFN;YFAES(1)DEEEDDVDFAMFN	278.82	1.0267999999999997e-135	40593400.0	12855.240000000002	10549.66	13806.710000000003	13588.090000000002	10006.24	10188.109999999999	10765.919	13714.900000000001	12846.296999999999	15471.99	True	False	12290.139042029752	12292.812001440541	10908.870250855833	12396.843246570717	11322.235948665386	12156.818067451832	13180.450389280408	13232.539193320681	12249.075456412087	12669.862684351545	0.9700293798139749	0.9702403496940266	0.8610093512954405	0.9784512709740705	0.8936352532572746	0.9595066947699937	1.0402993874242603	1.0444106240917743	0.9667883355626917	1.0	13.629113268220864	-8.603006211379302	5.286296516235837	1.0159365515821677	0.9341934161664122	0.4646773274778473	0.03957513615574814	0.17720866101033714	8.572443422493992	0.01512713779999497	0.011631508820257135	2.4945590489320774e-09	8.603006211379302	-0.08174313541575551	
YFDDEFTAQSIT(ph)ITPPDRYDSLGLLELDQR	ddPTM_K562_Methotrexat_30min_R1	1	YFDDEFTAQSITITPPDRYDSLGLLELDQR	30	1	P31751-2;P31751	P31751-2	AKT2	RAC-beta serine/threonine-protein kinase	1	YFDDEFT(0.018)AQS(0.046)IT(0.412)IT(0.412)PPDRY(0.056)DS(0.057)LGLLELDQR	63.728	0.0020969	69929000.0	483.4	319.08	299.89	277.29	486.34	353.24	278.82	559.32	717.8	926.73	True	False	462.15031480681665	371.8025465673438	236.94718723933198	252.9804162204985	550.3022345330439	421.49863067307723	341.3524825460013	539.648398574406	684.4296346731351	758.890216802694	0.6089817796754816	0.4899292919255142	0.3122285437248383	0.3333557484590312	0.725140767859073	0.5554145004647805	0.44980482682220485	0.7111020627568726	0.9018822742988158	1.0	9.567747386179777	-9.628159837577753	1.8518398398034286	0.9953426066344778	0.4911470634108923	0.7121863288976866	0.11618528877195423	0.19967673949533568	1.2501717637732246	0.11453805425099708	0.03529231233739615	2.3541826919233263e-10	9.628159837577753	-0.5041955432235855	
YFDEHYEYR	ddPTM_K562_Methotrexat_30min_R1	1	YFDEHYEYR	9	0	P33552	P33552	CKS2	Cyclin-dependent kinases regulatory subunit 2	0		94.40899999999999	0.015574000000000001	8290400.0	4296.4	4049.7	4475.6	4331.7	4201.2	4133.9	3338.5	5268.6	4700.2	5863.5	False	True	4107.5354003641005	4718.844091869663	3536.2327226928332	3951.946586398112	4753.73143833578	4932.717668835449	4087.2436087075025	5083.30035172909	4481.688727905642	4801.563331523309	0.8554579241717455	0.982772435987551	0.7364752849299508	0.8230541416485588	0.9900382667300247	1.027314923964677	0.8512318439858656	1.0586761020845266	0.933381154942262	1.0	12.229288491210202	-7.765278980601499	24.990259030604605	0.9759575006392203	0.850894784214188	0.3977355938694621	0.07674957180324544	105.0646071419598	683818.9832465275	0.02355755341674117	0.027726556425120393	1.7168051974225342e-08	7.765278980601499	-0.1250627164250323	
YFDS(ph)GDYNMAK	ddPTM_K562_Methotrexat_30min_R1	3	YFDSGDYNMAK	11	0	A6NMQ3;Q5T5H1;O43768-6;O43768-5;O43768-2;O43768;O43768-9;O43768-7;O43768-3;O43768-4;H3BQ52;H3BTD3;H3BMD8;P56211-2;P56211	A6NMQ3	ENSA;ARPP19	Alpha-endosulfine;cAMP-regulated phosphoprotein 19	1	YFDS(0.999)GDY(0.001)NMAK;YFDS(1)GDYNMAK;YFDS(0.999)GDYNMAK	148.89	8.3437e-08	407226000.0	8642.099999999999	6527.0	8720.2	9346.3	5576.75	5223.959999999999	5987.599999999999	6443.7	8329.800000000001	9945.1	True	False	8262.203631758353	7605.475809969455	6889.949188583887	8526.92439006687	6310.190373878673	6233.416336459424	7330.471718285764	6217.07141867607	7942.549416133024	8143.946020010651	1.0145209228372989	0.9338809210279501	0.8460209794679945	1.0470261429920085	0.7748320480481795	0.7654049181002887	0.9001130042210393	0.7633979158751765	0.9752703906211103	1.0	12.991512283585392	-5.362851139314669	0.7221435166840792	0.8646464605106148	1.4395435680871862	0.13261148458479322	0.0962752495393405	16.230302194539473	2.4743684327015187	0.03706085520377315	10.241989048613727	4.336594959504242e-06	5.362851139314669	0.5748971075765714	
YFEADPPGQVAAS(ph)PDPTT	ddPTM_K562_Methotrexat_30min_R1	2	YFEADPPGQVAASPDPTT	18	0	H0Y8X4;O43598	H0Y8X4	DNPH1	2-deoxynucleoside 5-phosphate N-hydrolase 1	1	YFEADPPGQVAAS(0.951)PDPT(0.024)T(0.024);YFEADPPGQVAAS(0.999)PDPTT	152.89	3.7688e-15	24890000.0	8992.4	7935.9	9430.4	8990.2	9184.900000000001	8082.9	7328.8	10028.2	9900.7	10642.1	True	False	8597.10486319574	9247.172587764146	7451.087914041131	8202.043124185957	10392.875342276098	9644.806029519348	8972.469959411574	9675.502521962126	9440.418618011021	8714.712565942564	0.9865046951512275	1.0610989769074493	0.8550009948876883	0.9411719620265918	1.1925666238140613	1.1067268090070608	1.0295772685006659	1.1102491847837146	1.0832736646879835	1.0	13.089237365934702	-7.735442245310246	24.994514105106745	1.0906867251676624	0.9605306429860243	0.4566319215076551	0.0673296565150316	207.00872788682244	199024.31970840812	0.020303338471277726	0.02620239683771616	1.83889848368034e-08	7.735442245310246	-0.1301560821816381	
YFEGEFTGLPPALT(ph)PPAPHSLLTAR	ddPTM_K562_Methotrexat_30min_R1	1	YFEGEFTGLPPALTPPAPHSLLTAR	25	0	Q6P5Z2	Q6P5Z2	PKN3	Serine/threonine-protein kinase N3	1	YFEGEFT(0.001)GLPPALT(0.999)PPAPHSLLTAR	88.395	0.00026809	12625000.0	1319.7	678.56	595.65	1023.3	1050.5	715.23	1003.0	1833.4	1602.2	2542.8	True	False	1261.687568164163	790.6805064521025	470.6312050388741	933.5888777757433	1188.6591630895314	853.4380750093566	1227.9482820229523	1768.918282818987	1527.7140717098036	2082.2742797642154	0.6059180485613207	0.37971967196446116	0.22601787363582362	0.44835057842690035	0.570846585697696	0.4098586258799657	0.5897149544401029	0.849512621852722	0.7336757153254532	1.0	11.02394439940572	-9.3374228042343	0.8009426312145409	0.9734001375133742	0.4074865909319018	0.74033017135989	0.11224374044912833	0.3133503966246023	0.378603564975603	0.10642893480240433	0.04640731495103903	4.598087121829971e-10	9.3374228042343	-0.5659135465814724	
YFGTDAVPDGS(ph)DEEEVAYTG	ddPTM_K562_Methotrexat_30min_R1	2	YFGTDAVPDGSDEEEVAYTG	20	0	Q9NWZ5;Q9NWZ5-4	Q9NWZ5	UCKL1	Uridine-cytidine kinase-like 1	1	YFGTDAVPDGS(1)DEEEVAYTG;YFGTDAVPDGS(0.996)DEEEVAY(0.003)T(0.001)G	101.39	0.00027263	20123300.0	8618.0	6698.2	8865.3	7561.0	8007.799999999999	6421.3	5872.1	8849.1	9027.9	9591.5	True	False	8239.163038901837	7804.963700067015	7004.594681492708	6898.138869209812	9060.966060150731	7662.125345773501	7189.0679031575055	8537.872137282373	8608.194899506272	7854.386406464712	1.0489887576858234	0.9937076298720141	0.891806733079421	0.87825305660187	1.1536185758180828	0.9755218229990612	0.9152933827192914	1.0870196213233287	1.0959729320703044	1.0	12.939282859617956	-9.281315614063184	24.728881207048104	1.068622218781669	0.9794029853904884	0.17852192462963545	0.07951284814277709	1269.3944617586567	1579298.317659255	0.045045047295959845	0.02168597977405668	5.232200595956548e-10	9.281315614063184	-0.08921923339118054	
YFPSSLS(ph)PVTPSESLPRPR	ddPTM_K562_Methotrexat_30min_R1	2	YFPSSLSPVTPSESLPRPR	19	1	K7EKZ6;K7EQ21;Q9P0U4;Q9P0U4-2	K7EKZ6	CXXC1	CXXC-type zinc finger protein 1	1	YFPS(0.014)S(0.12)LS(0.865)PVT(0.001)PSESLPRPR;YFPS(0.002)S(0.008)LS(0.99)PVTPSESLPRPR	143.14	7.212000000000001e-10	42507000.0	1761.78	1333.13	1682.8000000000002	1970.75	1583.67	1290.36	1153.09	1967.87	1623.45	2251.4900000000002	True	False	1684.3342606958088	1553.4070731644836	1329.6032768226617	1797.977407286766	1791.9503634554958	1539.70380782276	1411.6997851623576	1898.6588967006649	1547.9761638480104	1843.7233436158292	0.9135504339781079	0.842538051353198	0.7211511864980253	0.975188285982566	0.9719193335922088	0.8351056643906024	0.765678750041638	1.0297959849969132	0.8395924308319422	1.0	10.848406475821214	-15.999998641000849	0.15314820040869181	1.4573014316493607	0.8396955786065418	0.14296516437101914	0.09161534142334972	270.9102711832527	2.436367965149745	37.412751846138256	0.45143828884177295	1.0000031292160834e-16	15.999998641000849	-0.6176058530428189	
YFQINQDEEEEEDED	ddPTM_K562_Methotrexat_30min_R1	12	YFQINQDEEEEEDED	15	0	K7ERI7;P35268	K7ERI7	RPL22	60S ribosomal protein L22	0	;;;;;;;;;;;	208.84	3.4207000000000002e-18	257238800.0	47371.93000000001	42718.76	52388.55	49272.25	42614.86	41176.91	41286.69	49861.229999999996	47731.189999999995	54232.44999999999	False	True	45289.51667874738	49777.30899523377	41392.90928689552	44952.62834260323	48219.46104024514	49133.76508987809	50546.28121227735	48107.58227928578	45512.177395115614	44410.427781814855	1.0197946505098177	1.1208473208091128	0.9320538295702941	1.0122088569705334	1.0857688936738863	1.1063564920218432	1.1381624482566906	1.083249693419635	1.0248083539909494	1.0	15.43861084762841	-7.765003027808648	24.938104029708956	1.082140321389239	1.0219725046452297	0.15789701930289335	0.056333787984922404	147.8956982536442	1034965.0157816109	0.017543884850836588	0.020700701431657927	1.717896410307879e-08	7.765003027808648	-0.060167816744009395	
YFQS(ph)PSR	ddPTM_K562_Methotrexat_30min_R1	1	YFQSPSR	7	0	H7BZZ6;Q16629-4;Q16629	H7BZZ6	SRSF7	Serine/arginine-rich splicing factor 7	1	YFQS(0.999)PS(0.001)R	82.75	0.030022000000000004	9688000.0	1497.6	1921.3	2077.4	1755.9	1535.8	1644.4	1564.1	1853.8	1582.5	1732.5	True	False	1431.7672971756067	2238.7621684838837	1641.3821293507215	1601.962973210622	1737.78461939353	1962.157027173616	1914.889240191524	1788.6008032561576	1508.9299204099143	1418.7274617317528	1.0091912194523514	1.5780072134158631	1.156939703801312	1.1291548351754643	1.2248896749149578	1.3830401399142105	1.3497231088021213	1.2607078184508556	1.0635798355295505	1.0	10.470381758224331	-9.823811075730763	3.7038047352521	1.0052678141526572	1.2709310058445733	0.282757249262524	0.14732125494781562	0.2724063114530038	6.936656110373867	0.1349770164941093	0.03666844981511682	1.5003373616291918e-10	9.823811075730763	0.2656631916919161	
YFQSPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	YFQSPSR	7	0	H7BZZ6;Q16629-4;Q16629	H7BZZ6	SRSF7	Serine/arginine-rich splicing factor 7	1	YFQS(0.025)PS(0.975)R	104.01	0.011403	23019000.0	990.68	1183.4	1599.5	1516.4	1664.6	1256.6	1216.7	1680.5	1096.9	1498.8	True	False	947.1308934067378	1378.9367356393223	1263.7868084608072	1383.4595663628832	1883.5240769907975	1499.4201656205091	1489.5759468966355	1621.395862483533	1045.905358418727	1227.3527963310546	0.7716859376032803	1.1235047818047101	1.0296850361515169	1.1271898108665097	1.5346232009420977	1.221670061047443	1.2136493690725672	1.3210511821298632	0.8521635845416808	1.0	10.261334288641507	-5.736341420787391	1.047988394036822	1.2015895103933691	2.746335746856775e-13	0.29426263084809623	0.17763677400341876	5.762505844355513	2.4052206120785358	0.05582217029062367	10.053360333150707	1.835095115338149e-06	5.736341420787391	-1.2015895103930945	
YGDFRADDADEFGYSR	ddPTM_K562_Methotrexat_30min_R1	1	YGDFRADDADEFGYSR	16	1	Q7KZF4	Q7KZF4	SND1	Staphylococcal nuclease domain-containing protein 1	0		107.69	0.0034170000000000003	47688000.0	3055.8	2253.3	2902.7	3333.7	2372.0	2395.4	2350.3	2552.7	2625.5	3419.4	False	True	2921.470690911608	2625.6195254487784	2293.4629377425354	3041.4396969031523	2683.959576247852	2858.277148438143	2877.4146034282603	2462.920094115866	2503.441078063969	2800.11352533654	1.0433400876346548	0.9376832409440293	0.8190606977147074	1.086184424089594	0.9585181286266857	1.02077188034532	1.027606408594605	0.8795786570188623	0.8940498502692263	1.0	11.45126960437514	-11.333119694728937	0.0032355373782978064	0.5542298428318378	1.365989609819044	0.0	0.07967336776743551	869254.7865761457	714.2742406005616	90876.55142213043	88329.78425737849	4.64387269063131e-12	11.333119694728937	0.8117597669872062	
YGGDSDHPSDGET(ph)S(ph)VQPMMTK	ddPTM_K562_Methotrexat_30min_R1	1	YGGDSDHPSDGETSVQPMMTK	21	0	Q8WYQ5-3;Q8WYQ5;Q8WYQ5-2	Q8WYQ5-3	DGCR8	Microprocessor complex subunit DGCR8	2	Y(0.003)GGDS(0.051)DHPS(0.402)DGET(0.769)S(0.767)VQPMMT(0.008)K	40.759	0.032764999999999996	14635000.0	2037.8	1875.7	3378.3	2391.4	1649.0	1408.3	1413.7	1925.5	1878.8	3071.4	True	False	1948.2207519928234	2185.6275435513558	2669.2409972010914	2181.7496748880244	1865.8724035551054	1680.4340436442494	1730.758211660865	1857.7790736162096	1791.4549980828733	2515.1396975254856	0.7745974324645171	0.8689885280335244	1.061269479316484	0.8674467175857205	0.7418563690083854	0.6681275180450377	0.6881360162076355	0.7386385239133959	0.7122685868484332	1.0	11.29642281802493	-7.705575008584807	4.4700873428181485	0.7365393300171322	0.9073985212218911	0.2558981957967359	0.10961981358067567	0.23773980920578347	9.702829260247949	0.03265749431813734	0.04170025718037402	1.9698129642499594e-08	7.705575008584807	0.1708591912047589	
YGGSHYSSSGYS(ph)NSR	ddPTM_K562_Methotrexat_30min_R1	1	YGGSHYSSSGYSNSR	15	0	Q9BRL6-2;Q9BRL6	Q9BRL6-2	SRSF8	Serine/arginine-rich splicing factor 8	1	YGGSHYSSS(0.001)GYS(0.999)NSR	202.32	5.1011e-13	5928800.0	1218.8	1006.3	1150.7	1170.8	1138.8	1242.0	1161.1	1153.3	1161.0	945.08	True	False	1165.2230113499138	1172.5739708246144	909.1837952459214	1068.1577817842672	1288.5721608056715	1481.9989222510537	1421.5062315621624	1112.737785303337	1107.025363409738	773.916853987559	1.505617826186591	1.515116210201392	1.174782265771068	1.3801970796741923	1.665000773876913	1.9149329990878807	1.8367686712570466	1.437800171387952	1.4304189884299043	1.0	9.59603476805235	-10.201849516879806	1.901325752281556	1.0017643439363193	1.5603723021695957	0.4038440496385448	0.20281048286248454	0.8884528519396244	5.7179697343653	0.22441025216713792	0.06278804562640583	6.282760188609884e-11	10.201849516879806	0.5586079582332764	
YGGSVGSQPPPVAPEPGPVPS(ph)SPSQEPPTKR	ddPTM_K562_Methotrexat_30min_R1	1	YGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR	31	1	E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2	E9PS08	UBXN1	UBX domain-containing protein 1	1	YGGSVGSQPPPVAPEPGPVPS(0.472)S(0.472)PS(0.052)QEPPT(0.004)KR	95.62899999999999	6.2341e-08	22957000.0	2588.6	1915.4	2978.2	3395.5	2006.7	1897.0	2006.3	2248.0	2759.3	3415.5	True	False	2474.808243502122	2231.887293766738	2353.1165195110825	3097.821786853843	2270.6162232953475	2263.568402182165	2456.2638466825997	2168.936565821471	2631.0207452682957	2796.919853128313	0.884833450173442	0.7979804252418621	0.8413242577827736	1.1075833236297334	0.8118274182063877	0.8093075672691863	0.8782031576397533	0.7754732633455863	0.9406850690861014	1.0	11.449623198057534	-9.995718869720442	24.636189433419485	1.0000000179955024	0.8650619594623035	0.2037287435802695	0.08855067974457553	125.12186332404487	720018.948361432	0.08737897994927372	0.02256115561282421	1.0099064136049218e-10	9.995718869720442	-0.13493805853319896	
YGGSVGSQPPPVAPEPGPVPSS(ph)PSQEPPTKR	ddPTM_K562_Methotrexat_30min_R1	2	YGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR	31	1	E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2	E9PS08	UBXN1	UBX domain-containing protein 1	1	YGGSVGSQPPPVAPEPGPVPS(0.344)S(0.574)PS(0.08)QEPPT(0.003)KR;YGGSVGSQPPPVAPEPGPVPS(0.406)S(0.538)PS(0.045)QEPPT(0.011)KR	125.98	2.173e-21	134299000.0	7681.3	5473.4	10456.2	8366.599999999999	5364.5	5523.7	5552.3	6687.1	7551.5	9455.8	True	False	7343.639249328924	6377.786318107372	8261.586512427568	7633.113167984502	6070.025778575716	6591.076849306072	6797.544612438717	6451.910902715637	7200.4324132546435	7743.262991424596	0.9483907827309699	0.8236561673251388	1.0669386435120436	0.9857747536714068	0.7839105794673467	0.851201471085958	0.8778656517241852	0.8332289513943814	0.9298964042973719	1.0	12.918725927200088	-5.916833124612432	19.780100963733737	0.9008348364876698	3.0488555575820913	0.018975295649838575	0.08524846486782245	1885.5227186967234	447150.4317451163	0.02129263802670847	521.5517670798822	1.2110633889439908e-06	5.916833124612432	2.1480207210944213	
YGGSVGSQPPPVAPEPGPVPSSPS(ph)QEPPTKR	ddPTM_K562_Methotrexat_30min_R1	1	YGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR	31	1	E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2	E9PS08	UBXN1	UBX domain-containing protein 1	1	YGGSVGSQPPPVAPEPGPVPS(0.204)S(0.308)PS(0.469)QEPPT(0.02)KR	111.81	2.5420000000000003e-15	19001000.0	2850.4	2223.2	3549.6	3797.4	2355.1	2037.9	2069.4	3075.6	3123.8	4355.6	True	False	2725.0998289725912	2590.546012061298	2804.5874681540995	3464.487837843849	2664.83693002585	2431.695333055895	2533.5156279344938	2967.4294047333233	2978.5752198271684	3566.758633373058	0.7640269805404477	0.7263025840387292	0.7863126598790402	0.9713266845218252	0.7471312763055494	0.6817661588601128	0.7103131690014489	0.8319681003833576	0.835093014693386	1.0	11.800397874950235	-10.173773817005921	1.5852784009012983	0.9988475591439228	0.7740733499248807	0.44642876498365236	0.07552587577106999	0.6788551489991969	3.3218379011414925	0.07872043491408393	0.02275810174834808	6.702335799310795e-11	10.173773817005921	-0.224774209219042	
YGLFPANY(ph)VELRQ	ddPTM_K562_Methotrexat_30min_R1	1	YGLFPANYVELRQ	13	1	Q14247-3;Q14247	Q14247-3	CTTN	Src substrate cortactin	1	Y(0.001)GLFPANY(0.999)VELRQ	54.538999999999994	0.033647	35383000.0	0.0	121.92	107.25	0.0	58.99	0.0	0.0	0.0	0.0	58.685	True	False	0.0	142.06520771433674	84.7396906579691	0.0	66.74821897253825	0.0	0.0	0.0	0.0	48.05657783072318	0.0	2.9562073315905706	1.7633317744026697	0.0	1.3889507323566697	0.0	0.0	0.0	0.0	1.0	5.586662010886752	-8.260948338575167	24.999992309923073	0.12499996977352988	1.280278287124446	0.2637000563790107	0.84618193661626	58.107060404897965	2958412.342985508	0.29141205078156823	0.27465649033207495	5.483421889914834e-09	8.260948338575167	1.1552783173509162	
YGLLANTEDPTEMASLDS(ph)DEETVFESR	ddPTM_K562_Methotrexat_30min_R1	3	YGLLANTEDPTEMASLDSDEETVFESR	27	0	Q9BVV8	Q9BVV8	C19orf24	Uncharacterized membrane protein C19orf24	1	YGLLANTEDPT(0.001)EMAS(0.083)LDS(0.894)DEET(0.022)VFESR;YGLLANTEDPTEMAS(0.002)LDS(0.966)DEET(0.032)VFESR;YGLLANTEDPTEMASLDS(0.996)DEET(0.004)VFESR	125.26	3.8582e-14	0.0	2310.17	1798.42	2290.0299999999997	2489.08	1810.6799999999998	1657.22	1750.23	2100.78	2138.52	2224.21	True	False	2208.617692919454	2095.5783370867575	1809.3839981115975	2270.8662209460053	2048.8161574706824	1977.454310735016	2142.763630752772	2026.894376666562	2039.1006719715713	1821.3840159644344	1.2126040821490227	1.1505417411808874	0.9934115937398941	1.246780580614444	1.1248677596337757	1.0856877481094733	1.1764480263203392	1.112831977716302	1.1195336371126847	1.0	10.830819413192952	-15.999999999886349	0.2622296838317832	0.11812943655558107	1.144584261327229	0.2874181701515717	0.0656014104328421	267.7918143462404	2.6290083350501474	127.22583876684628	0.08523510161827595	1.0000000002616918e-16	15.999999999886349	1.0264548247716478	
YGLQDS(ph)DEEEEEHPSK	ddPTM_K562_Methotrexat_30min_R1	4	YGLQDSDEEEEEHPSK	16	0	P52948-6;P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-4;P52948-3	P52948-6	NUP98	Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96	1	YGLQDS(1)DEEEEEHPSK;YGLQDS(0.984)DEEEEEHPS(0.016)K;YGLQDS(1)DEEEEEHPSK;YGLQDS(0.999)DEEEEEHPS(0.001)K	185.71	2.7031999999999997e-08	96644000.0	8605.7	7063.099999999999	14079.8	9355.8	7673.5	6529.200000000001	5658.8	9424.0	8761.3	11534.300000000001	True	False	8227.403732174233	8230.157222827525	11124.642391851492	8535.591539816576	8682.69975056404	7790.875493688866	6927.929948466082	9092.552578425948	8353.989075315887	9445.326500347805	0.8710555142663703	0.8713470331093867	1.177793313067775	0.9036841171665448	0.9192588260706834	0.8248391935844657	0.7334770214889846	0.9626509552730796	0.8844574165867394	1.0	13.205384952349444	-7.504652028243692	24.786034695218778	0.8780890798925272	0.9761176595344874	0.11534499732311032	0.10496889658746372	1334.1667016286685	1814299.2710563622	0.030571502560245628	0.04436457085995353	3.128585093712491e-08	7.504652028243692	0.09802857964196021	
YGPADVEDT(ph)TGSGATDSKDDDDIDLFGSDDEEESEEAKR	ddPTM_K562_Methotrexat_30min_R1	1	YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKR	39	2	C9JZW3;P24534	C9JZW3	EEF1B2	Elongation factor 1-beta	1	Y(0.001)GPADVEDT(0.275)T(0.275)GS(0.234)GAT(0.083)DS(0.077)KDDDDIDLFGS(0.054)DDEEES(0.001)EEAKR	40.513000000000005	0.014421000000000002	21446000.0	919.95	688.88	2139.9	1312.1	493.83	479.86	478.89	903.08	810.36	1601.1	True	False	879.510099517027	802.7057110420953	1690.764233463758	1197.0702301666706	558.777300817233	572.5861536484622	586.2932729590942	871.3181645293829	772.6865404760682	1311.1252750237866	0.670805541065533	0.6122265555650528	1.2895520097673991	0.9130098038457487	0.42618147286276337	0.43671353497328796	0.44716800455887606	0.6645575225552535	0.5893308253569057	1.0	10.356589823021865	-7.749539862735346	24.95605908306686	0.5620146570111781	0.8827543885552575	0.24971165778406856	0.23128782081492502	283.0333501174367	593584.2728304972	0.07000422954870418	0.08964488459724096	1.780164504789666e-08	7.749539862735346	0.3207397315440793	
YGPADVEDTTGSGATDSKDDDDIDLFGS(ph)DDEEESEEAKR	ddPTM_K562_Methotrexat_30min_R1	1	YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKR	39	2	C9JZW3;P24534	C9JZW3	EEF1B2	Elongation factor 1-beta	1	Y(0.001)GPADVEDT(0.122)T(0.122)GS(0.271)GAT(0.041)DS(0.098)KDDDDIDLFGS(0.344)DDEEES(0.001)EEAKR	50.733000000000004	0.00092735	446110000.0	1533.0	801.86	2859.6	1419.9	845.07	587.4	649.53	1155.0	1064.1	1708.5	True	False	1465.6111555623706	934.3537357104498	2259.4090387461856	1295.4195715369676	956.2115173270547	700.9067366588316	795.203636712231	1114.377995339768	1014.6302232595198	1399.0740942965072	1.0475579253001037	0.6678372071353865	1.614931652266979	0.9259120562791495	0.6834602407586312	0.5009789971211401	0.5683785011487051	0.7965110639119566	0.7252155031644008	1.0	10.450256653629022	-7.61419530833223	4.629738948056954	0.6866676768582165	1.0951979748336114	0.33616535883785514	0.24884161483210776	0.23400800882436046	8.828779447655753	0.07474476221872975	0.09790072151981849	2.431110458658864e-08	7.61419530833223	0.40853029797539486	
YGS(ph)PPQRDPNWNGER	ddPTM_K562_Methotrexat_30min_R1	2	YGSPPQRDPNWNGER	15	1	O15234;J3KSY7	O15234	CASC3	Protein CASC3	1	Y(0.001)GS(0.999)PPQRDPNWNGER;YGS(1)PPQRDPNWNGER	105.17	0.019075	15539000.0	3362.3999999999996	2528.7	4340.8	3525.0	2760.3	3103.9	2642.3	2805.8	3081.5	3843.0	True	False	3214.59292202408	2946.5246944491755	3429.72540054184	3215.968722915566	3123.3278323427267	3703.6847461956872	3234.9030364798077	2707.1184236574204	2938.2417375944096	3146.9954605686153	1.0214799996703048	0.9362977263134604	1.0898412290439528	1.0219171788492152	0.9924792938145477	1.1768954841537924	1.0279338108404226	0.8602231740011104	0.9336657057215815	1.0	11.619759382262558	-9.162925801767644	7.401410691701261	0.9231676009643589	1.0397253086123854	0.34652014692700095	0.06703667011193702	0.2841611941374402	18.628248447281344	0.03223061266532457	0.018527662308504854	6.871858341349851e-10	9.162925801767644	0.11655770764802653	
YGVIILDEAHER	ddPTM_K562_Methotrexat_30min_R1	1	YGVIILDEAHER	12	0	O43143	O43143	DHX15	Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15	0		134.75	6.3275e-05	3075900.0	2515.2	2340.9	2466.2	3102.2	2563.2	2463.4	2017.8	3234.2	2930.1	3464.1	False	True	2404.634819615444	2727.6939365033695	1948.578322617095	2830.234942476217	2900.305727587897	2939.4171860493097	2470.343014422643	3120.451352837989	2793.880290548557	2836.717922184683	0.8476820345124507	0.9615668569551147	0.6869129663468293	0.9977146195405029	1.0224159776007062	1.0362035516684482	0.8708454919339043	1.1000217287853526	0.9848988751045309	1.0	11.470006983565543	-7.4650123390715954	24.98920174103693	1.0031981484097345	0.844556457929062	0.47153477085261797	0.08200516916674536	239.67379798185476	103501.10309072127	0.02226291540160962	0.03302114534563709	3.427580480479137e-08	7.4650123390715954	-0.15864169048067256	
YHGHS(ph)MSDPGVSYR	ddPTM_K562_Methotrexat_30min_R1	2	YHGHSMSDPGVSYR	14	0	Q5JPU3;P08559-3;P29803;P08559;P08559-2;P08559-4	Q5JPU3	PDHA1;PDHA2	Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial	1	YHGHS(0.885)MS(0.115)DPGVSYR;YHGHS(0.87)MS(0.13)DPGVSYR	97.214	0.003930599999999999	45262000.0	2604.8	2513.1	3741.2	3622.0	2957.8999999999996	3214.9	2616.7	3133.7	2867.8	4501.9	True	False	2490.2961108994527	2928.347059603835	2955.97324652302	3304.4648835177804	3346.915695861517	3836.1339252374496	3203.561584815013	3023.485994801931	2734.47660395043	3686.562285697075	0.6755063167008378	0.794330010634861	0.8018237635619084	0.8963540088114785	0.907869021729729	1.040572117856431	0.8689834421743037	0.8201369624303619	0.7417415988221614	1.0	11.848060416650714	-6.525318311454578	1.2064180586536706	0.8936561888681597	0.6417668229991071	0.42171814188039425	0.08081229423777275	1.0637002037076286	1.8525377744585632	0.02703295630854669	0.30029513030333416	2.9831953166167125e-07	6.525318311454578	-0.25188936586905253	
YHGHSMS(ph)DPGVSYR	ddPTM_K562_Methotrexat_30min_R1	1	YHGHSMSDPGVSYR	14	0	Q5JPU3;P08559-3;P29803;P08559;P08559-2;P08559-4	Q5JPU3	PDHA1;PDHA2	Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial	1	YHGHS(0.187)MS(0.813)DPGVSYR	160.18	8.9058e-07	16182000.0	2373.6	2130.0	3165.1	2237.0	2711.8	2519.6	2008.3	1965.4	2328.5	2874.6	True	False	2269.2593860683905	2481.9462961904314	2500.788763650704	2040.885683166557	3068.4492322381625	3006.4770406632456	2458.712397593911	1896.2757680006762	2220.248543238223	2353.982084556478	0.9640087751542721	1.0543607415168852	1.062365249105915	0.8669928698930975	1.3035142673213247	1.2771877323907952	1.04449070098049	0.8055608326169398	0.9431883776025202	1.0	11.200887625165938	-9.059371032333035	8.33682783553017	0.9087596009588271	1.091313060793661	0.25925933016413305	0.12980074476017273	0.5042693819269668	66.00758345868519	0.0652985830366683	0.037784960633788424	8.72225878180894e-10	9.059371032333035	0.18255345983483384	
YHIDLDPHFNDILGQHSR	ddPTM_K562_Methotrexat_30min_R1	1	YHIDLDPHFNDILGQHSR	18	0	H3BV19;H3BSA1;P19784	H3BV19	CSNK2A2	Casein kinase II subunit alpha	0		74.726	0.0063006	5805600.0	2161.5	1696.0	2001.4	1984.2	1749.7	1884.2	1637.1	2417.7	2727.2	2407.2	False	True	2066.4830481070226	1976.2351729290936	1581.3334907492717	1810.248266669237	1979.8162186175662	2248.294983337708	2004.2613484544104	2332.6681206345947	2600.4130672618758	1971.2327537550793	1.0483201662363295	1.0025377110665825	0.8022053650117811	0.9183330904079304	1.0043543639614023	1.1405527729056053	1.0167552992595186	1.1833549925502216	1.3191811379494613	1.0	10.94488241764573														
YHPGYFGK	ddPTM_K562_Methotrexat_30min_R1	1	YHPGYFGK	8	0	E9PLL6;P46776	E9PLL6	RPL27A	60S ribosomal protein L27a	0		91.906	0.02853	4851000.0	4552.1	3233.2	5463.2	4314.2	3480.8	2667.6	2760.8	4053.2	4209.8	5141.5	False	True	4351.995134530638	3767.4313449966685	4316.548979045375	3935.9807842276123	3938.5862112156506	3183.0759460522627	3379.979677975041	3910.6466586243696	4014.0873168667645	4210.324527846355	1.0336483816739777	0.8948078277765841	1.0252295162751637	0.9348402381326474	0.9354590566989613	0.7560167690162484	0.8027836466335179	0.9288230949324766	0.9533914286935101	1.0	12.03971572381364	-6.257357272856912	23.68005537679973	0.9086627183701327	1.0336484868512372	0.17067946387622146	0.07774564004107498	373.6224548118388	2167173.528982109	0.020980117831100063	0.15466884738378572	5.528950822994422e-07	6.257357272856912	0.12498576848110454	
YHSDWQMDHR	ddPTM_K562_Methotrexat_30min_R1	2	YHSDWQMDHR	10	0	O14646;O14646-2	O14646;O14646-2	CHD1	Chromodomain-helicase-DNA-binding protein 1	0	;	68.657	0.026124	6980400.0	1366.45	1047.08	1352.17	1618.65	1185.27	1212.54	1358.67	1476.53	1575.38	1971.85	False	True	1306.382494141032	1220.092172683135	1068.3679954963736	1476.7454676162492	1341.1537803285382	1446.8461941918608	1663.3863333361146	1424.5996029948287	1502.140927655843	1614.728857382832	0.8090413992219284	0.7556018876510773	0.6616392533096824	0.9145470218509455	0.8305752227047537	0.896030431100936	1.0301335272053953	0.8822531389597095	0.9302744053825404	1.0	10.657076214937232	-7.778128359725398	1.1780257855410938	0.947780724697069	0.7484514627752435	0.6099487184221315	0.06572505775101214	0.32596305007312215	0.9571088237864935	0.027712778329803	0.039967997796723435	1.666754515129201e-08	7.778128359725398	-0.19932926192182543	
YHTINGHNAEVR	ddPTM_K562_Methotrexat_30min_R1	2	YHTINGHNAEVR	12	0	P22626;P22626-2;A0A087WUI2	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	0	;	174.23	3.7298e-05	23157000.0	2300.35	1994.65	2529.6	2776.1	2113.8999999999996	2373.9	2415.7	2642.6000000000004	2854.7	3252.9	False	True	2199.2293683613175	2324.232009247062	1998.6715290293573	2532.723623173306	2391.914902289349	2832.622577722846	2957.48221822816	2549.6582601600603	2721.9856200911127	2663.768288754529	0.8256083600235322	0.872535354917743	0.7503173370848468	0.9508047805304815	0.8979440563156912	1.0633892556200024	1.1102625670234103	0.9571621792044751	1.0218552535452714	1.0	11.379252877880722	-7.80914977057127	1.6013707885897344	1.0299250051799536	0.8267814158593133	0.6913419154077014	0.05828514105865178	0.21255430516438925	1.1304095141992172	0.02164041849361551	0.028079708934478986	1.5518517468742378e-08	7.80914977057127	-0.20314358932064025	
YHTINGHNAEVRK	ddPTM_K562_Methotrexat_30min_R1	1	YHTINGHNAEVRK	13	1	P22626;P22626-2;A0A087WUI2	P22626	HNRNPA2B1	Heterogeneous nuclear ribonucleoproteins A2/B1	0		90.434	0.006270899999999999	6294400.0	1943.1	1592.9	2301.5	2623.3	1821.2	1132.7	1460.2	1544.5	2067.3	2778.2	False	True	1857.6836506022453	1856.0996503294539	1818.4466018584224	2393.3193619360004	2060.719721864498	1351.5782441495717	1787.6870203488677	1490.1790595690657	1971.1916742264868	2275.041058691575	0.8165495051199819	0.8158532538295975	0.7993027619924583	1.05198952466926	0.9057945191765735	0.5940896051022891	0.7857823108375042	0.6550119409388152	0.8664422414249356	1.0	11.151676867176144														
YHTSQSGDEMTSLSEYVSR	ddPTM_K562_Methotrexat_30min_R1	7	YHTSQSGDEMTSLSEYVSR	19	0	P08238	P08238	HSP90AB1	Heat shock protein HSP 90-beta	0	;;;;;;	311.0	2.9842999999999987e-227	303259000.0	7190.7	6092.29	8153.58	7678.000000000001	6386.11	6266.66	6117.61	6890.91	7716.639999999999	8396.499999999998	False	True	6874.60543790107	7098.937371276055	6442.254983263433	7004.881660864029	7225.995400283377	7477.603354358925	7489.6397702755985	6648.552789495029	7357.8950906995	6875.812486251464	0.9998244500773098	1.0324506937137596	0.9369445423570013	1.0187714797154002	1.0509296777263955	1.0875228737419427	1.08927341826897	0.9669479501933986	1.0701128201811763	1.0	12.747314485550794	-7.5293985098982406	7.11671448596373	1.0459903693247148	0.9913378208315046	0.25541580852689283	0.0415837801184203	0.1869685149289368	55.409782631221745	0.012352145886524583	0.0166085365595894	2.9552994305181486e-08	7.5293985098982406	-0.05465254849321022	
YHTVNGHNCEVR	ddPTM_K562_Methotrexat_30min_R1	3	YHTVNGHNCEVR	12	0	F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;A0A2R8Y4L2;H0YH80;F8VZ49	F8W6I7	HNRNPA1	Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed	0	;;	142.76	7.1127e-07	6207800.0	913.22	810.5799999999999	1288.1399999999999	1006.13	816.77	843.24	799.2	1058.3799999999999	1355.77	1379.84	False	True	873.0759422587529	944.5145674957929	1017.7770174746512	917.9241450175991	924.1895712866598	1006.1841958123821	978.440944160262	1021.1561755045051	1292.7405486218963	1129.9376050770227	0.772676241887922	0.8358997552182624	0.9007373618698831	0.8123671084962505	0.8179120396861754	0.8904776611481968	0.8659247552820106	0.9037279323356068	1.1440813570708412	1.0	10.142027394177536	-9.613477163637151	4.848232446609525	1.069114806338295	0.8464474828521648	0.7754636477370246	0.0486165190468336	0.09304794066029538	3.68328561698787	0.035122060764672794	0.012381877375440825	2.4351338424215987e-10	9.613477163637151	-0.22266732348613016	
YIASVQGST(ph)PS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	2	YIASVQGSTPSPR	13	0	P49792;F8WBP7	P49792	RANBP2	E3 SUMO-protein ligase RanBP2	2	YIASVQGS(0.003)T(0.997)PS(1)PR;YIASVQGS(0.076)T(0.925)PS(0.999)PR	136.33	0.00032778	31819000.0	5991.9	5721.0	6067.200000000001	5525.4	4389.799999999999	4910.200000000001	4987.3	6067.2	6268.6	6054.6	True	False	5728.503250498478	6666.298009626978	4793.777633193752	5040.996760736926	4967.135644103213	5859.026657034718	6105.828979993086	5853.813137078302	5977.174154237971	4958.053269726451	1.15539364723577	1.3445394083058684	0.9668669077164308	1.0167290439408796	1.0018318428388453	1.1817191825690037	1.2314972526162393	1.1806676569655479	1.2055485951984837	1.0	12.27555805660252														
YIASVQGSTPS(ph)PR	ddPTM_K562_Methotrexat_30min_R1	4	YIASVQGSTPSPR	13	0	P49792;F8WBP7	P49792	RANBP2	E3 SUMO-protein ligase RanBP2	1	YIASVQGS(0.009)T(0.031)PS(0.961)PR;YIASVQGS(0.003)T(0.042)PS(0.955)PR;YIASVQGS(0.01)T(0.034)PS(0.956)PR;YIASVQGSTPS(1)PR	157.86	1.0337e-09	171372000.0	5348.1	4428.32	5413.0	5358.0	5188.51	4573.9	5161.900000000001	5678.200000000001	5388.200000000001	6239.0	True	False	5113.003927634124	5160.024611430053	4276.885273021786	4888.272458831658	5870.890008835476	5457.741441613603	6319.587474550625	5478.4944875656	5137.703758074376	5109.056642853915	1.000772605405683	1.009976003818127	0.8371183903400063	0.956785723969009	1.1491142923708126	1.0682483720839926	1.2369382287804327	1.0723103834106873	1.005607124215491	1.0	12.318841215293308	-7.7349523106462446	13.796861055431814	1.0987027530889124	0.9471874943424125	0.4242892457509203	0.07791307644800602	1.5362480130879528	798.2375333730737	0.02348173609132846	0.030178557350099933	1.8409741455227965e-08	7.7349523106462446	-0.15151525874649996	
YIDQEELNK	ddPTM_K562_Methotrexat_30min_R1	2	YIDQEELNK	9	0	P08238;Q58FF8;Q14568;P07900;P07900-2	P08238;P07900	HSP90AB1;HSP90AB2P;HSP90AA2P;HSP90AA1	Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-alpha	0	;	153.05	4.4560000000000004e-10	60738000.0	3054.3999999999996	2349.2	4090.4	3165.0	2175.29	2267.52	2231.4	3112.8999999999996	2723.8	3912.6	False	True	2920.1322332352947	2737.365370427491	3231.880938623371	2887.5293639795063	2461.3787633289166	2705.686148295254	2731.8482517507605	3003.4175425914814	2597.1711325197634	3203.9902261308252	0.911404850557762	0.8543613360934513	1.0087049930006269	0.9012291424704248	0.7682229312856879	0.8444739082624079	0.8526393836880618	0.9373990963194798	0.8106051982736966	1.0	11.645654031430528	-7.532759500340146	24.961209317721238	0.861090274885884	0.9239757653460088	0.11039686310549801	0.0698733098596926	389.42348988355576	983773.305893743	0.020116561328872507	0.026000474879147768	2.9325167382134282e-08	7.532759500340146	0.06288549046012482	
YIEIDS(ph)DEEPR	ddPTM_K562_Methotrexat_30min_R1	1	YIEIDSDEEPR	11	0	E7EW05;Q9NVU7-2;Q9NVU7	E7EW05	SDAD1	Protein SDA1 homolog	1	YIEIDS(1)DEEPR	185.3	0.00017829	9960900.0	1032.4	959.59	1200.8	930.58	957.4	911.03	1002.8	1151.4	1269.0	1214.5	True	False	987.0169321608557	1118.1459372588617	948.76848990293	848.9974962186567	1083.3148812393306	1087.0736538956332	1227.7034269318208	1110.9046093802667	1210.004466982737	994.54228125438	0.9924333542823008	1.1242819519433451	0.9539750172373596	0.8536565133740187	1.089259754620975	1.093039154177082	1.2344406568450395	1.117000886054963	1.2166445708638978	1.0	9.95788889583562	-7.987703056106316	24.813456154486218	1.1398398074705154	0.9871383259884632	0.40448656257895843	0.08652687006193328	213.55917431231387	430928.7260569185	0.027437442638616576	0.03109004390313505	1.028719432886299e-08	7.987703056106316	-0.1527014814820522	
YIEIDS(ph)DEEPRGELLSLR	ddPTM_K562_Methotrexat_30min_R1	8	YIEIDSDEEPRGELLSLR	18	1	E7EW05;Q9NVU7-2;Q9NVU7	E7EW05	SDAD1	Protein SDA1 homolog	1	YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;Y(0.011)IEIDS(0.989)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;Y(0.005)IEIDS(0.995)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR	120.56	0.00010601	1410164400.0	10123.539999999999	8946.51	10868.32	11118.420000000002	9327.17	9238.85	8924.27	11047.130000000001	11249.34	12177.56	True	False	9678.521303184529	10424.768712831294	8587.208156380588	10143.685381060672	10553.856340974575	11024.127007116867	10925.76472064702	10658.59617632711	10726.360638776665	9972.085881030956	0.9705613668645945	1.0453949993211988	0.8611245690046951	1.0172079845758382	1.0583398966760074	1.105498602663172	1.0956348401922775	1.068843199255037	1.0756386143024	1.0	13.283679592241194	-7.620485409490766	3.6732554203476693	1.07419268181159	0.9640688949465963	0.4792691792815287	0.04986732106960858	0.18882987322971456	4.917274050664755	0.01488242909380096	0.019770986902900075	2.3961532492920675e-08	7.620485409490766	-0.1101237868649938	
YIELFR	ddPTM_K562_Methotrexat_30min_R1	1	YIELFR	6	0	H0YBR2;H0YBB3;A0A2U3TZN9;Q6NXG1-2;Q6NXG1-5;Q6NXG1-4;Q6NXG1-3;Q6NXG1;Q9H6T0-2;Q9H6T0	H0YBR2	ESRP1;ESRP2	Epithelial splicing regulatory protein 1;Epithelial splicing regulatory protein 2	0		124.32	0.004667899999999999	24592000.0	3894.8	3045.7	3576.2	3787.3	3406.6	3242.9	3307.8	3720.6	3462.0	3790.8	False	True	3723.5892555018413	3548.950156951734	2825.6044916646047	3455.273289162588	3854.6276106433115	3869.544528959693	4049.658352218864	3589.7443891438456	3301.052375645575	3104.249386396959	1.1995135673760213	1.143255491167522	0.9102375936825836	1.1130785124107105	1.2417261407973739	1.24653146294119	1.3045531618576633	1.1563969070508189	1.0633979312715727	1.0	11.600028748780423	-6.265011616830084	8.611835227020896	1.1409159873501298	1.1998133290194688	0.025410503668150564	0.11322184968613115	0.4691850325244602	584.7531471382401	0.030665563282942166	0.1629618855392934	5.432358004250256e-07	6.265011616830084	0.05889734166933902	
YIS(ph)PDQLADLYK	ddPTM_K562_Methotrexat_30min_R1	1	YISPDQLADLYK	12	0	P06733;A0A2R8Y6G6;P06733-2	P06733	ENO1	Alpha-enolase	1	Y(0.001)IS(0.999)PDQLADLYK	126.63	0.00044055	2959000.0	977.71	1080.8	1324.0	1097.3	764.13	836.19	639.53	1195.8	1035.6	1423.1	True	False	934.7310390768985	1259.3838295411347	1046.110493530546	1001.1014126681558	864.6264886164719	997.7718830894592	782.9608821556716	1153.7430362141076	987.4551820388667	1165.3627998790516	0.8020944543398077	1.080679621549479	0.8976693726958829	0.859046996156095	0.741937608362141	0.8561899205921228	0.6718601985895997	0.9900290590482638	0.8473371401089436	1.0	10.186563448214729	-7.127452073497448	3.837837374039349	0.8401051964262503	0.9499615431179544	0.0804431271416256	0.11237716880400124	0.4483630493183219	11.532706088038024	0.03000940977962568	0.055780063755102534	7.456721560266564e-08	7.127452073497448	0.10985634669170419	
YISPDQLADLYK	ddPTM_K562_Methotrexat_30min_R1	1	YISPDQLADLYK	12	0	P06733;A0A2R8Y6G6;P06733-2	P06733	ENO1	Alpha-enolase	0		136.02	7.061e-05	6960600.0	1558.2	980.43	1443.2	1639.3	1257.6	704.42	927.15	1247.2	1472.4	1697.1	False	True	1489.7033937359981	1142.4293930394297	1140.2920424949275	1495.5851141774433	1422.9964431236508	840.5391955008753	1135.086988711445	1203.33526908031	1403.9484453785526	1389.738744764766	1.071930533237132	0.8220461560441009	0.8205082047186782	1.0761627822577498	1.0239308995911416	0.604818134823714	0.8167628577582583	0.8658715701878142	1.0102247279694228	1.0	10.440597982677323														
YKDANIMS(ph)PGSSLPSLHVR	ddPTM_K562_Methotrexat_30min_R1	1	YKDANIMSPGSSLPSLHVR	19	1	P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7	P25054-2	APC	Adenomatous polyposis coli protein	1	YKDANIMS(0.988)PGS(0.009)S(0.003)LPSLHVR	74.744	0.0055162	14016000.0	5013.5	4017.3	7486.8	5855.0	4054.2	3616.4	3907.8	4902.4	4791.3	6662.4	True	False	4793.1125429954	4681.0905425755	5915.422993175601	5341.701240473938	4587.398361730205	4315.2181178975125	4784.223625612455	4729.97981329323	4568.5535087899025	5455.774800024031	0.8785392943591235	0.8580065552842983	1.0842498471801925	0.9790912265019461	0.8408335259200945	0.790945058413794	0.8769100267099336	0.8669675686159913	0.8373794147019741	1.0	12.41356837961181	-7.764482214354004	24.989643486032563	0.8586964643567592	0.9529940888474564	0.20646400413634014	0.076292778118379	114.65138180434177	941588.6258265061	0.02393382844146183	0.028311227265027984	1.7199577771637452e-08	7.764482214354004	0.09429762449069723	
YLCIPAADS(ph)PSQNLTR	ddPTM_K562_Methotrexat_30min_R1	2	YLCIPAADSPSQNLTR	16	0	S4R3A4;Q9NRW4;Q9NRW4-2	S4R3A4	DUSP22	Dual specificity protein phosphatase 22	1	YLCIPAADS(0.97)PS(0.011)QNLT(0.02)R;YLCIPAADS(0.933)PS(0.067)QNLTR	115.58	0.00079428	37622000.0	4099.1	3502.5	4069.0	4472.1	3817.2	4039.0	3087.4	4480.6	4780.1	4935.299999999999	True	False	3918.908472123754	4081.228592679336	3214.97250617507	4080.0379363831776	4319.228707611001	4819.479586933978	3779.8280417922856	4323.0147583717435	4557.874194345299	4041.4693459652053	0.9696741795248776	1.0098378196914506	0.7954959523285097	1.0095432099358808	1.0687273211469723	1.1925067777009115	0.9352608465448021	1.069664121710491	1.1277765100199624	1.0	11.980664189704108	-7.512119101716526	14.429067815338286	1.0662566091808707	0.9283232402781488	0.37052552198512856	0.08202985238706866	2.216091872912678	2969.0651869084986	0.02370225845484323	0.03285531369789083	3.0752533359632446e-08	7.512119101716526	-0.1379333689027219	
YLDEDTIYHLQPSGR	ddPTM_K562_Methotrexat_30min_R1	2	YLDEDTIYHLQPSGR	15	0	P31153-2;P31153	P31153-2	MAT2A	S-adenosylmethionine synthase isoform type-2	0	;	219.84	4.504e-27	73484000.0	11220.099999999999	10075.1	12635.8	12227.1	9983.3	10520.1	9118.7	12704.900000000001	11215.4	13366.900000000001	False	True	10726.877838568395	11739.839027581322	9983.718258423922	11155.16912679742	11296.278936574692	12552.960436371422	11163.800597490215	12258.06146579413	10693.998501968623	10946.024882090718	0.9799793033651074	1.0725207693241587	0.9120862017003754	1.019106867283747	1.0319982878037341	1.1468053993655618	1.0198954157098445	1.1198642062151798	0.976975533781725	1.0	13.418119420691143	-7.778575047921583	3.3326548282637014	1.0602236534303784	0.9936444466839692	0.1561913282605445	0.060811838819480296	0.38467537233564386	8.902834353724348	0.018492765360172452	0.022679114572657026	1.6650410767897493e-08	7.778575047921583	-0.06657920674640916	
YLDIHER	ddPTM_K562_Methotrexat_30min_R1	1	YLDIHER	7	0	P62072	P62072	TIMM10	Mitochondrial import inner membrane translocase subunit Tim10	0		101.28	0.015059000000000001	6993300.0	5393.8	5147.2	6587.9	5793.4	5582.9	5082.1	4822.8	5934.6	5582.3	5963.5	False	True	5156.695010353759	5997.687312559334	5205.189818980273	5285.501616833768	6317.149206675439	6064.143899172366	5904.43566753768	5725.876754236702	5322.780091440293	4883.452362503498	1.0559527620149003	1.228165418098729	1.0658831974992047	1.0823288985917658	1.293582641489505	1.2417739437236135	1.2090699835373793	1.1725059095900212	1.0899625298508235	1.0	12.253685708124427	-9.9982112481137	2.806267008229817	1.0006698517511354	1.1724222675870715	0.33158016578486016	0.07554407433766797	0.3027294060743699	5.673291442881241	0.07601279714415132	0.02048120608515802	1.0041272471505408e-10	9.9982112481137	0.17175241583593603	
YLEES(ph)DEDDLF	ddPTM_K562_Methotrexat_30min_R1	6	YLEESDEDDLF	11	0	P11388;P11388-2;P11388-3;P11388-4;J3QR57	P11388	TOP2A	DNA topoisomerase 2-alpha	1	YLEES(1)DEDDLF;YLEES(1)DEDDLF;YLEES(1)DEDDLF;YLEES(1)DEDDLF;YLEES(1)DEDDLF;YLEES(1)DEDDLF	177.78	1.6545000000000002e-07	718590800.0	24835.6	22409.68	28952.5	27887.4	23613.100000000002	22583.600000000002	21524.99	25730.100000000002	25582.7	29684.399999999998	True	False	23743.85676130777	26112.498720569365	22875.765909322614	25442.554939981706	26718.63653874289	26947.561079346928	26352.516940240504	24825.157799040502	24393.365860897775	24308.267512282855	0.9767811198107849	1.0742229452335441	0.9410693665339825	1.0466626190914552	1.099158404655621	1.1085759635371155	1.0840968788468657	1.0212639706427644	1.0035007985892832	1.0	14.569159453479411	-6.243985633888645	22.92560370479234	1.044889999170615	0.9767809424567904	0.13330875583470048	0.0494639239852785	2441.2809348180012	3206475.3891191143	0.013180970676085755	0.33886745523055056	5.701831331671865e-07	6.243985633888645	-0.06810905671382472	
YLGGS(ph)MDLSTFDFR	ddPTM_K562_Methotrexat_30min_R1	1	YLGGSMDLSTFDFR	14	0	O95983-2;O95983	O95983-2	MBD3	Methyl-CpG-binding domain protein 3	1	YLGGS(0.999)MDLS(0.001)TFDFR	86.699	0.017874	6629600.0	3045.7	2138.1	3042.6	2915.4	2325.3	2496.6	2168.2	2526.2	3032.5	3139.1	True	False	2911.814674818207	2491.3846835139725	2403.999839589154	2659.8114084505078	2631.1177076935624	2979.0326161771177	2654.474042953305	2437.3521141362085	2891.5197368992526	2570.5785714990725	1.132746809260196	0.9691921932038371	0.9351979613629255	1.0347131334326023	1.023550782250233	1.1588957634700303	1.032636804952944	0.9481725791850933	1.1248517236386275	1.0	11.32787739438879	-6.23993630732811	23.53031130498585	1.025462498016321	1.1327470559802244	0.1851930784395004	0.06764573961950993	4526.806959021715	4953412.580611731	0.017375420573580155	0.7244914852495723	5.755243362793035e-07	6.23993630732811	0.10728455796390346	
YLHDESGLNRR	ddPTM_K562_Methotrexat_30min_R1	1	YLHDESGLNRR	11	1	B5MCX3;Q15019;Q15019-3;Q15019-2;C9IY94;C9J938;H7C310;C9JB25;C9J2Q4	B5MCX3	SEPT2	Septin-2	0		77.533	0.012953000000000001	11740000.0	1776.7	1155.6	1826.1	1921.3	1304.5	1486.3	1482.9	1718.5	1727.1	2289.3	False	True	1698.5983953605123	1346.5432581585264	1442.8265651330296	1752.862612010687	1476.0646151835251	1773.5064397276483	1815.4780731922592	1658.0593809449283	1646.80749797154	1874.6855862294397	0.9060710808455662	0.7182768502887104	0.7696365597150564	0.935016850231523	0.7873664928273856	0.946028738234824	0.9684173637050976	0.8844466470133735	0.8784446362996626	1.0	10.872432938284694	-7.865919115068823	1.1289263289298912	0.9289123627950975	0.7995059090386495	0.3480689872895918	0.07095109253305355	0.5555121976175331	1.5065263851300486	0.03154221996126338	0.041951211641807915	1.3616982675777134e-08	7.865919115068823	-0.129406453756448	
YLLGDAPVS(ph)PSSQK	ddPTM_K562_Methotrexat_30min_R1	4	YLLGDAPVSPSSQK	14	0	H3BMI8;A0A590UJT3;Q9NYB0	H3BMI8	TERF2IP	Telomeric repeat-binding factor 2-interacting protein 1	1	YLLGDAPVS(0.993)PS(0.006)S(0.001)QK;Y(0.006)LLGDAPVS(0.902)PS(0.087)S(0.005)QK;Y(0.001)LLGDAPVS(0.992)PS(0.007)SQK;YLLGDAPVS(0.912)PS(0.076)S(0.012)QK	236.12	8.4045e-48	514259000.0	24841.8	17849.1	33207.5	25197.300000000003	18583.4	16779.8	16954.499999999996	22914.199999999997	23490.5	30329.9	True	False	23749.78421673143	20798.360392174945	26237.69955733808	22988.291830332015	21027.44282851785	20022.258869233665	20756.97821291938	22108.294598107797	22398.431782236392	24836.861207259975	0.9562313054996343	0.8373989055467062	1.0564015854655833	0.9255715381463898	0.8466223913338693	0.8061509343773693	0.8357327457646694	0.8901404414034975	0.9018221584170703	1.0	14.60019524204324	-6.1763038324481325	19.944879167177145	0.8956294652356951	0.9562476076135288	0.046339903908238944	0.07422425914908955	72954.63427221369	17075008.74348253	0.01931526654655225	189.75345650905837	6.663404342969686e-07	6.1763038324481325	0.060618142377833695	
YLLSQS(ph)SPAPLTAAEEELR	ddPTM_K562_Methotrexat_30min_R1	1	YLLSQSSPAPLTAAEEELR	19	0	F8VS81;Q12792-4;Q12792;Q12792-3	F8VS81	TWF1	Twinfilin-1	1	YLLS(0.011)QS(0.633)S(0.356)PAPLTAAEEELR	101.08	0.00065623	8145800.0	738.56	592.09	802.51	781.62	762.59	716.23	534.18	945.36	884.15	934.57	True	False	706.0937867267735	689.9228086907942	634.0741179480349	713.0965881433373	862.883951623461	854.6313108565795	653.983462902313	912.1111529648514	843.0460594821012	765.3103168315404	0.9226241580671104	0.9014941959062334	0.8285189732880693	0.9317744351018642	1.1274955173685428	1.1167121258665855	0.8545337081170793	1.1918187079210965	1.1015741470367137	1.0	9.579901037941921	-7.619070095646094	5.403707392135811	1.0662959913172358	0.885069360756068	0.4749225458779831	0.08810789254145707	0.18386308643511426	8.375689309727715	0.02663364031574618	0.034619423219171955	2.403974764305902e-08	7.619070095646094	-0.18122663056116783	
YLLSQSS(ph)PAPLTAAEEELR	ddPTM_K562_Methotrexat_30min_R1	1	YLLSQSSPAPLTAAEEELR	19	0	F8VS81;Q12792-4;Q12792;Q12792-3	F8VS81	TWF1	Twinfilin-1	1	YLLS(0.001)QS(0.303)S(0.696)PAPLTAAEEELR	204.78	8.0157e-21	7285800.0	2060.9	1898.1	2323.0	1960.6	1653.1	1823.9	1774.5	2142.0	1983.3	2174.6	True	False	1970.3053036519827	2211.7287628164577	1835.434045673307	1788.7172420278748	1870.5116254196141	2176.3428617501586	2172.4767960615436	2066.664645902844	1891.0968158919334	1780.7588676951623	1.1064413826012	1.2420147404230535	1.030703302378559	1.004469091507607	1.0504014099565422	1.2221434924353352	1.2199724709911917	1.1605527752208977	1.0619611954197827	1.0	10.798276459196767	-8.237191552286692	24.834941075466126	1.148400963231161	1.0877376111893302	0.051416473964901344	0.08714046597756361	1886.1673713646435	1931839.2233777298	0.030295644673563885	0.0302829224599498	5.7917318680639425e-09	8.237191552286692	-0.06066335204183071	
YLQDQLS(ph)PLTR	ddPTM_K562_Methotrexat_30min_R1	1	YLQDQLSPLTR	11	0	H0YC17;E7EMV7;A0A0A0MRZ4;Q15025-7;Q15025-8;Q15025-5;Q15025-6;Q15025-4;Q15025-3;Q15025-2;Q15025	H0YC17	TNIP1	TNFAIP3-interacting protein 1	1	Y(0.005)LQDQLS(0.995)PLTR	86.756	0.021268000000000002	12217000.0	943.47	781.82	856.25	1089.1	812.51	574.7	769.49	1159.8	1251.2	1767.3	True	False	901.9961884790798	911.0024663322082	676.5348263485873	993.6202939368349	919.3693066176825	685.7526413990987	942.0677203727225	1119.009176619102	1193.0319850975575	1447.2248445128575	0.6232591928607305	0.629482329429506	0.4674704341303041	0.686569400535196	0.6352636289402193	0.473839738171387	0.6509477251890509	0.7732103141138138	0.8243584192331479	1.0	10.499073364696173	-9.714349723618184	1.194619021999192	0.9881206897414784	0.5873133254979684	0.7865372674858719	0.06978368435102184	0.19693728028061688	0.5612819351268727	0.06635145025281586	0.021788116981725513	1.9304131902322005e-10	9.714349723618184	-0.40080736424350993	
YLRMAVLT(ph)LY(ph)TDPMGS(ph)EK	ddPTM_K562_Methotrexat_30min_R1	1	YLRMAVLTLYTDPMGSEK	18	1	Q8N7B1	Q8N7B1	HORMAD2	HORMA domain-containing protein 2	3	Y(0.146)LRMAVLT(0.854)LY(0.868)T(0.153)DPMGS(0.978)EK	45.736999999999995	0.032717	0.0	2774.8	1817.1	4846.5	3301.4	2139.5	1763.3	1651.8	2397.5	2243.9	3812.8	True	False	2652.8231144517063	2117.3448895810475	3829.2858813412313	3011.9713877541676	2420.8817510043336	2104.032769408438	2022.2581976525535	2313.178566084063	2139.581578772706	3122.2649732125997	0.8496470149751995	0.6781438820044933	1.226444877098677	0.9646751360295512	0.7753607627072759	0.6738802720012359	0.6476894866394977	0.7408655530295875	0.6852658557583027	1.0	11.608377262502664	-7.866578772976041	4.809033635129259	0.7271019712484377	0.9322717564683904	0.22670574419755962	0.15651932639878186	0.29564308556348384	11.307894079074355	0.05013358782840034	0.0576070015904768	1.3596315289382774e-08	7.866578772976041	0.20516978521995277	
YLS(ph)FTPPEKDGFPSGTPALNAK	ddPTM_K562_Methotrexat_30min_R1	1	YLSFTPPEKDGFPSGTPALNAK	22	1	Q13177	Q13177	PAK2	Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34	1	Y(0.022)LS(0.876)FT(0.102)PPEKDGFPSGTPALNAK	79.426	0.0016022000000000002	18333000.0	4240.8	2415.5	4809.0	4279.6	2352.5	2065.0	2471.2	2501.7	3572.5	5756.2	True	False	4054.379509790542	2814.6203185201803	3799.6566188734087	3904.4141125076444	2661.894984453236	2464.03202451564	3025.4295060170666	2413.7137930229405	3406.4152547642443	4713.69640128157	0.8601274169223603	0.5971153164966109	0.806088533372737	0.8283125980379441	0.5647149832835042	0.5227388051223905	0.6418380074699988	0.512063906442234	0.722663269920842	1.0	12.202643125458374	-10.028470824548116	23.266476796204987	1.0000000065856653	0.662329190861954	0.40798629435612543	0.11983646410044463	1344.862780187458	1099026.600074938	0.12085496323127014	0.031204617293131016	9.365461339768714e-11	10.028470824548116	-0.3376708157237114	
YLSVPPS(ph)PNISTSESRSPPEGDTTLFLSR	ddPTM_K562_Methotrexat_30min_R1	1	YLSVPPSPNISTSESRSPPEGDTTLFLSR	29	1	Q9BTC0;Q9BTC0-1	Q9BTC0	DIDO1	Death-inducer obliterator 1	1	YLSVPPS(0.429)PNIS(0.017)T(0.017)S(0.067)ES(0.216)RS(0.216)PPEGDT(0.017)T(0.017)LFLS(0.002)R	63.115	0.00061712	6812400.0	827.74	530.77	696.31	762.66	568.27	516.39	679.46	698.91	733.36	719.55	True	False	791.3535407078906	618.4707209525799	550.1640466391651	695.7987819060385	643.0074655962757	616.1750591475212	831.8462011000144	674.3289391540408	699.2662536693936	589.2325224179407	1.3430242062344722	1.0496208159296079	0.9336959955664762	1.1808560380387672	1.0912626868552115	1.0457247957377178	1.4117452269716853	1.1444190765080369	1.1867407637309713	1.0	9.202693251235036														
YLSVPPSPNIS(ph)TSESRSPPEGDTTLFLSR	ddPTM_K562_Methotrexat_30min_R1	2	YLSVPPSPNISTSESRSPPEGDTTLFLSR	29	1	Q9BTC0;Q9BTC0-1	Q9BTC0	DIDO1	Death-inducer obliterator 1	1	Y(0.001)LS(0.004)VPPS(0.174)PNIS(0.198)T(0.198)S(0.198)ES(0.198)RS(0.025)PPEGDT(0.001)T(0.001)LFLSR;YLS(0.003)VPPS(0.115)PNIS(0.22)T(0.101)S(0.101)ES(0.22)RS(0.22)PPEGDT(0.011)T(0.007)LFLS(0.001)R	45.15	0.023983	33670000.0	2685.6000000000004	2386.6000000000004	2974.6000000000004	2859.4	2586.0	2226.4	2404.7	3334.4	3194.2	3717.6	True	False	2567.544239646642	2780.945084736188	2350.27211031417	2608.7208415048976	2926.104327224683	2656.6202902574432	2944.0151882159457	3217.127262044088	3045.7023391932685	3044.306615719462	0.843392129553893	0.9134904711557664	0.7720221406669082	0.856917903089856	0.9611726729875255	0.8726520109833297	0.9670560688645304	1.0567684757613627	1.0004584700721666	1.0	11.571897955823118	-8.634908195683472	0.9861616395771133	1.0268902017663597	0.8515770924319651	0.6633811643079742	0.04830760205292374	0.33393075036316483	0.6569230740631186	0.03436573787666811	0.021925962354351135	2.3178845694318834e-09	8.634908195683472	-0.1753131093343946	
YMLTHQELAS(ph)DGEIETK	ddPTM_K562_Methotrexat_30min_R1	4	YMLTHQELASDGEIETK	17	0	Q02241-2;A0A2U3TZL8;Q02241-3;Q02241;H7BYN4	Q02241-2	KIF23	Kinesin-like protein KIF23;Kinesin-like protein	1	YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(0.999)DGEIET(0.001)K;YMLTHQELAS(0.998)DGEIET(0.001)K	142.89	4.3281e-22	52077200.0	9416.300000000001	6542.400000000001	11117.6	9024.7	6386.6	6029.38	5580.2	8114.3	7533.9	11124.0	True	False	9002.370726759264	7623.420398214211	8784.167690993354	8233.518562750662	7226.549843872066	7194.472352529837	6831.701897651524	7828.915469770981	7183.6506334131145	9109.335806236086	0.988257642296643	0.836879939478722	0.9643038612079569	0.9038549832704756	0.7933124870558511	0.7897911006425553	0.7499670714712993	0.8594386721819441	0.7886031195046425	1.0	13.153130150546442	-7.675964009497699	5.546170487216289	0.8173059206937829	0.9222144555226748	0.2657872274267521	0.07441147931650115	0.2477791852672177	12.340969387468158	0.020865148670005006	0.026923696953578706	2.108802901706805e-08	7.675964009497699	0.10490853482889184	
YMPAVTST(ph)PTVNQHETSTSK	ddPTM_K562_Methotrexat_30min_R1	1	YMPAVTSTPTVNQHETSTSK	20	0	A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154-4;Q15154-2;Q15154	A0A5H1ZRS1	PCM1	Pericentriolar material 1 protein	1	Y(0.084)MPAVT(0.247)S(0.04)T(0.629)PTVNQHETSTSK	94.259	0.0031744	0.0	987.83	578.15	1060.6	1082.7	903.14	664.14	790.39	964.35	1102.4	1149.2	True	False	944.406175994244	673.6794606302803	837.9945539565689	987.7813720001932	1021.9187401738972	792.47565557473	967.6550773959328	930.4332639012172	1051.1496646192043	941.0687440243174	1.0035464273902612	0.7158663646073367	0.8904711364368881	1.0496378487464342	1.0859129544605197	0.842101770574002	1.028251212826306	0.9886985088064667	1.1169743669565997	1.0	9.878156303844916	-7.1307525959461815	5.045774244434697	1.0111108900508665	0.8475391910307816	0.3316737905240259	0.09476384556535705	0.23968682904917493	8.783059386655042	0.02529521429121505	0.04517613712722502	7.400267252036787e-08	7.1307525959461815	-0.16357169902008495	
YMPAVTSTPTVNQHETS(ph)TSK	ddPTM_K562_Methotrexat_30min_R1	1	YMPAVTSTPTVNQHETSTSK	20	0	A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154-4;Q15154-2;Q15154	A0A5H1ZRS1	PCM1	Pericentriolar material 1 protein	1	YMPAVTSTPTVNQHET(0.056)S(0.733)T(0.156)S(0.056)K	106.69	0.0018697	15157000.0	2404.9	1650.3	2171.3	2058.9	1828.9	1601.7	1522.9	2403.2	2623.1	2605.0	True	False	2299.1834755459536	1922.9840246962751	1715.573802570146	1878.399433648469	2069.4324068295523	1911.2058564971924	1864.4490914184985	2318.6780938532715	2501.152653540124	2133.209257033892	1.0778049401223955	0.9014511906675657	0.8042219941214559	0.8805509480397992	0.9701028626263241	0.8959298531990327	0.8740113447711692	1.0869435739638893	1.172483498884604	1.0	11.058809778365626	-9.271264840291025	22.439604664780497	1.0972852788834944	0.910172163926932	0.5029963718901957	0.07785110520536348	137.19250425908953	313316.6497899555	0.0421301697333342	0.020720491406636673	5.354700190440374e-10	9.271264840291025	-0.18711311495656235	
YMSQMS(ph)VPEQAELEK	ddPTM_K562_Methotrexat_30min_R1	2	YMSQMSVPEQAELEK	15	0	A0A5H1ZRS1;Q15154-5;A0A4W8VX11;Q15154-4;Q15154-2;Q15154;E5RGQ4;E9PGW9;E7EV93;Q15154-3	A0A5H1ZRS1	PCM1	Pericentriolar material 1 protein	1	Y(0.003)MS(0.026)QMS(0.971)VPEQAELEK;YMS(0.011)QMS(0.989)VPEQAELEK	96.48899999999999	0.0026076999999999997	46886000.0	5467.0	3952.3	5544.1	5493.7	3817.7000000000003	3490.7	3368.3	4611.2	5148.1	6405.700000000001	True	False	5226.677226000966	4605.350397386592	4380.469174609291	5012.075850519502	4319.794466374967	4165.2283719015695	4123.727017286051	4449.021482346958	4908.765954668106	5245.565657497886	0.9963991621246945	0.8779511492347474	0.8350804204209995	0.9554881547150899	0.8235135633466634	0.7940475143892045	0.7861358119484587	0.8481490410834213	0.9357934444403787	1.0	12.356882639402626	-6.270416161454425	3.9648606541278197	0.8618737827645334	1.0076273720261455	0.21847900045596302	0.06785198466519385	0.3205882344321733	10.496020024656511	0.017061221447766648	0.13313010020523566	5.365174336585497e-07	6.270416161454425	0.14575358926161208	
YMY(ph)FTVVMAEGKEIDFR	ddPTM_K562_Methotrexat_30min_R1	1	YMYFTVVMAEGKEIDFR	17	1	R4GND3;Q8WV24	R4GND3	PHLDA1	Pleckstrin homology-like domain family A member 1	1	Y(0.203)MY(0.626)FT(0.171)VVMAEGKEIDFR	42.242	0.032241000000000006	11695000.0	1542.7	1429.1	1403.9	1660.5	1482.1	1659.0	1549.5	1835.3	1724.0	1939.6	True	False	1474.884755176823	1665.2344844534002	1109.2405754286513	1514.9265430925655	1677.0221281437352	1979.578270543074	1897.014818538947	1770.7514587420565	1643.8516162949095	1588.3196448917224	0.9285818254028884	1.0484252900913538	0.6983736422301	0.9537919825929243	1.05584674567068	1.2463349407719655	1.1943533057971267	1.1148583752880363	1.0349627177261116	1.0	10.633285564708723	-7.804028233083702	3.2704490990172492	1.1308809448124888	0.898104285121585	0.4746872720393607	0.10476971446073459	0.2049932642642631	4.496452555062433	0.034213354715131795	0.04135472307304517	1.570260719814294e-08	7.804028233083702	-0.23277665969090378	
YNDWS(ph)DDDDDSNESK	ddPTM_K562_Methotrexat_30min_R1	1	YNDWSDDDDDSNESK	15	0	H3BV87;Q9UH62	H3BV87	ARMCX3	Armadillo repeat-containing X-linked protein 3	1	YNDWS(0.98)DDDDDS(0.02)NESK	183.88	8.1675e-06	17474000.0	1383.1	902.57	2176.8	1470.6	812.01	979.94	819.03	1284.2	1237.6	1899.1	True	False	1322.300580077178	1051.7043514331438	1719.9194277320948	1341.6747812537956	918.8035478537171	1169.2995361277751	1002.7183264459201	1239.0339581085113	1180.0642461291063	1555.1545873447462	0.8502695428721716	0.6762699734106897	1.1059475641380876	0.8627275977396924	0.590811714366269	0.7518863691385332	0.6447708379640575	0.7967271988208093	0.7588083240933206	1.0	10.602842280651863	-4.720829717763898	15.65867845356191	0.7928832950891369	0.8550363595544431	0.0	0.151097151436305	0.0	0.0	0.035016858268056374	0.0	1.9018238185977475e-05	4.720829717763898	0.06215306446530622	
YNIT(ph)PSSVINFGALICGT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	YNITPSSVINFGALICGTR	19	0	Q4G0P3	Q4G0P3	HYDIN	Hydrocephalus-inducing protein homolog	2	Y(0.004)NIT(0.808)PS(0.045)S(0.143)VINFGALICGT(1)R	66.702	0.02415	0.0	3079.4	2393.8	4058.6	3514.6	2805.8	2408.1	2430.6	3031.4	3234.0	3809.7	True	False	2944.033263169449	2789.3347623571126	3206.755324050662	3206.480474768523	3174.8118798635	2873.431243697876	2975.7239225174335	2924.7839437861226	3083.6520458803566	3119.7264132522146	0.9436831546072622	0.8940959535773269	1.0278963278410438	1.0278082273970524	1.0176571465937811	0.9210523177583436	0.9538413079675588	0.9375129599063557	0.9884366888011018	1.0	11.607203801073126	-6.8530304726127875	0.00279424158539545	1.9307940551162874	6.149207536157551e-05	0.03358896391893518	0.04435442344930129	440055.0175386998	234.33939741568133	79625.05422738723	82308.13580404298	1.4027152784917544e-07	6.8530304726127875	-1.9307325630409258	
YNSMVLICALMGSECLHK	ddPTM_K562_Methotrexat_30min_R1	1	YNSMVLICALMGSECLHK	18	0	P52306-6;P52306-2;P52306-3;P52306-4;P52306;P52306-5	P52306-6	RAP1GDS1	Rap1 GTPase-GDP dissociation stimulator 1	0		40.085	0.033634	0.0	839.28	626.1	1516.4	910.66	546.33	517.16	505.79	722.11	797.86	1064.2	False	True	802.3862561254972	729.5523831196376	1198.128362832115	830.8238516908622	618.1819710335111	617.0938507498829	619.2262827162399	696.7129820041562	760.7676627477123	871.4630676911582	0.9207346654991678	0.8371581196808526	1.3748469754506283	0.9533666801187972	0.7093610664090603	0.7081124532159493	0.7105594094271936	0.799475052740924	0.8729775144267206	1.0	9.76729571449535	-7.584347794811954	6.13695682023264	0.7832334946824115	1.0457870397770577	0.3371140906943665	0.15475976373308023	0.21452539599230086	15.719335128201276	0.0466890546195028	0.06076465989831386	2.604067306952015e-08	7.584347794811954	0.2625535450946461	
YNVTTSKQLY(ph)T(ph)VAVS(ph)CLLLAS(ph)K	ddPTM_K562_Methotrexat_30min_R1	1	YNVTTSKQLYTVAVSCLLLASK	22	1	E5RFJ6;E7EN43;B4DZA8	E5RFJ6	CCNJL		4	Y(0.211)NVT(0.255)T(0.27)S(0.281)KQLY(0.58)T(0.404)VAVS(0.999)CLLLAS(0.999)K	46.695	0.029981999999999998	13696000.0	1507.3	1121.1	2411.7	1570.4	1327.8	1414.1	1047.7	1619.2	1666.5	1841.8	True	False	1441.0408967900594	1306.3427195582597	1905.5171278305277	1432.7254702032922	1502.4289735842738	1687.3548115581432	1282.6733948907745	1562.2518182287042	1589.0247787444691	1508.2321725930988	0.9554503099562466	0.8661416612750468	1.2634110069104136	0.9499369501845407	0.9961523171867845	1.1187633059551298	0.8504482388049568	1.0358165318425276	1.0535677514506694	1.0	10.558642814373744														
YNYHLDSSGS(ph)Y(ph)VFENTVATVMALR	ddPTM_K562_Methotrexat_30min_R1	1	YNYHLDSSGSYVFENTVATVMALR	24	0	P49588;P49588-2	P49588	AARS	Alanine--tRNA ligase, cytoplasmic	2	Y(0.025)NY(0.155)HLDS(0.149)S(0.281)GS(0.666)Y(0.652)VFENT(0.058)VAT(0.015)VMALR	46.178000000000004	0.016114	69811000.0	955.33	977.11	1010.4	1136.5	935.08	925.92	949.57	1106.8	1063.9	969.31	True	False	913.334837079843	1138.56081946978	798.3308479329784	1036.8648095300825	1058.0594100159533	1104.8409356607845	1162.535244427253	1067.8732166597874	1014.4395212158665	793.7585661940577	1.15064564463113	1.4343918515789915	1.0057602927812723	1.3062722768482102	1.332973847563214	1.3919105666579648	1.4645955255656882	1.3453375650231587	1.2780202500112066	1.0	9.632556446107836	-6.191156215002608	20.501913297025325	1.297644836670822	1.150629375101375	0.05854815724875995	0.15271857812715622	35551.48708140907	10365749.610357095	0.037337607154780565	110.52875133318216	6.439376005693168e-07	6.191156215002608	-0.147015461569447	
YPEPERPSS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	YPEPERPSSR	10	1	F1T0I1;O15027-2;O15027-4;O15027-3;O15027;O15027-5;A0A3F2YNX0;A0A3F2YNZ0	F1T0I1	SEC16A	Protein transport protein Sec16A	1	YPEPERPS(0.004)S(0.996)R	110.98	0.00031757	0.0	1313.2	1007.0	1815.7	1356.6	1147.2	1212.1	1043.7	1126.6	1376.6	1261.9	True	False	1255.4733003812814	1173.3896339266491	1434.609383008619	1237.668984257377	1298.0769080402763	1446.3211704190826	1277.7762930681508	1086.9768394370415	1312.6021664684279	1033.3576819389891	1.2149455336950854	1.135511599163713	1.3882989482564474	1.197715956332776	1.2561738599596695	1.3996326690146728	1.2365285664403591	1.0518882846038764	1.2702302304517301	1.0	10.013123993503779	-10.289426020294451	0.7263254723181698	1.0032572969875106	1.2589292627023554	0.355684474708175	0.09790823427672267	1.2377103302417547	1.3077049031238999	0.10164714852659953	0.036974004038784376	5.135396487418251e-11	10.289426020294451	0.25567196571484474	
YPHVEDYRR	ddPTM_K562_Methotrexat_30min_R1	2	YPHVEDYRR	9	1	A0A087WTV2;B3KQ25;K7ESG5;K9J957;P61289;P61289-3;P61289-2	A0A087WTV2	PSME3	Proteasome activator complex subunit 3	0	;	89.75200000000001	0.0048864	10259500.0	1760.48	1370.5100000000002	1232.12	1863.15	1703.9	1202.2	1265.94	2273.62	2070.7200000000003	2581.7	False	True	1683.0914071392326	1596.9634828131213	973.5148499160551	1699.810532226989	1927.9927158384128	1434.5081355315747	1549.8592703331362	2193.6554958999172	1974.4526791729663	2114.1291128155085	0.7961157135279037	0.7553765156217693	0.4604803197755358	0.804023993578733	0.9119559936766554	0.6785338354388191	0.7330958459150579	1.0376166160346276	0.9339319283785241	1.0	11.045847771472861	-9.254406645611938	24.042850699753938	0.9893307106673842	0.7318891111070197	0.5258665104029765	0.11150318716485662	263.37729788284184	900414.7932623321	0.0567775748492302	0.031831283891528346	5.566642799605426e-10	9.254406645611938	-0.2574415995603645	
YPS(ph)SISSSPQKDLTQAK	ddPTM_K562_Methotrexat_30min_R1	1	YPSSISSSPQKDLTQAK	17	1	F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5	F8W726	UBAP2L	Ubiquitin-associated protein 2-like	1	Y(0.003)PS(0.399)S(0.337)IS(0.048)S(0.036)S(0.177)PQKDLTQAK	80.238	0.01093	29270000.0	2260.1	1322.0	3650.9	2582.7	1747.7	1231.0	1186.5	1910.0	1543.8	2765.8	True	False	2160.7487101673273	1540.4380298421368	2884.6259825005072	2356.278700900434	1977.5531835617066	1468.8733279315995	1452.6028281358242	1842.8242174016946	1472.0290749629223	2264.886818850034	0.9540206125021375	0.6801390767174289	1.2736291979327856	1.0403516331543678	0.8731355435084314	0.6485416029209796	0.6413578003307749	0.8136495837515465	0.6499349383428905	1.0	11.145223242234445	-8.020427451019236	4.786841332922417	0.7333827872295012	0.9839537758103926	0.3039134746548269	0.16755241902073503	0.23727854336705045	14.343798618819957	0.05563456100412014	0.058792105534107374	9.540531042939207e-09	8.020427451019236	0.25057098858089133	
YPSSIS(ph)SSPQKDLTQAK	ddPTM_K562_Methotrexat_30min_R1	1	YPSSISSSPQKDLTQAK	17	1	F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5	F8W726	UBAP2L	Ubiquitin-associated protein 2-like	1	YPS(0.001)S(0.005)IS(0.443)S(0.443)S(0.108)PQKDLTQAK	67.396	0.029192000000000003	35525000.0	2757.2	1773.5	5225.2	2763.5	2000.0	1438.0	1530.5	2281.1	2560.7	3776.5	True	False	2635.9967893780604	2066.540730654332	4128.501926582938	2521.2282456105427	2263.0350558582227	1715.873148306774	1873.7535848814837	2200.872420060211	2441.653615920171	3092.5392549667927	0.8523729440602898	0.6682342761972547	1.3349877192188686	0.8152615173958772	0.731772459225428	0.5548428029008798	0.6058948425220891	0.7116716195357862	0.7895303550306556	1.0	11.594576192745377	-7.5184195026984275	22.33445254350855	0.7091170572109142	0.9487722734095003	0.20431910847920254	0.19058098494364048	67.71575992296353	339162.5540260992	0.05595782449821696	0.07442786136038976	3.0309620402592e-08	7.5184195026984275	0.2396552161985861	
YQDEVFGGFVTEPQEES(ph)EEEVEEPEER	ddPTM_K562_Methotrexat_30min_R1	5	YQDEVFGGFVTEPQEESEEEVEEPEER	27	0	Q13283	Q13283	G3BP1	Ras GTPase-activating protein-binding protein 1	1	YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER	152.17	6.4798e-35	900450000.0	23984.600000000002	20782.6	28531.2	23255.4	22840.2	20949.199999999997	20825.800000000003	27015.1	25571.7	26907.0	True	False	22930.26570234915	24216.571406200586	22542.891021917454	21216.635188337757	25844.0866414065	24997.336410645537	25496.515784400377	26064.963620695544	24382.877248496832	22033.88156583913	1.040682080178726	1.0990606141654793	1.0231012159413384	0.9629095593048657	1.172924823262853	1.1344953605179076	1.1571504416148648	1.1829492476307997	1.1066083465883532	1.0	14.42743604719413	-7.7746385053105325	24.998909437020302	1.1368489899140686	1.035673005915997	0.3833056017978491	0.05743013476966524	219.6845759676101	416077.0804786105	0.017362189616186064	0.019801047756416983	1.680201989791831e-08	7.7746385053105325	-0.10117598399807148	
YQEDSDPERS(ph)DYEEQQLQKEEEAR	ddPTM_K562_Methotrexat_30min_R1	1	YQEDSDPERSDYEEQQLQKEEEAR	24	2	Q6P6C2-3;Q6P6C2;Q6P6C2-1	Q6P6C2-3	ALKBH5	RNA demethylase ALKBH5	1	YQEDS(0.027)DPERS(0.515)DY(0.457)EEQQLQKEEEAR	56.766000000000005	0.015567	0.0	381.9	525.69	452.06	554.54	336.02	223.05	298.86	474.88	323.78	619.6	True	False	365.1121332741483	612.5513372978155	357.178783765422	505.9243391788928	380.2125197347398	266.151255723106	365.8869626773472	458.1782012354538	308.72753847097755	507.3844359532437	0.7195966360067733	1.2072726199158839	0.7039608597657824	0.9971223067345222	0.7493578690887889	0.5245554196456121	0.7211237411922983	0.9030198184432989	0.6084686809341295	1.0	8.986935455101962	-7.837369350539986	7.860908749320247	0.7324156279237773	0.9136018694531138	0.14386419036774034	0.18285878531905478	0.415824183079863	37.39515215084568	0.05434388210758373	0.061819711984374796	1.4542217955337017e-08	7.837369350539986	0.1811862415293365	
YQEQGGEAS(ph)PQRTWEQQQEVVSR	ddPTM_K562_Methotrexat_30min_R1	1	YQEQGGEASPQRTWEQQQEVVSR	23	1	H0Y5J4;Q9UJU6-5;Q9UJU6	H0Y5J4	DBNL	Drebrin-like protein	1	Y(0.002)QEQGGEAS(0.982)PQRT(0.016)WEQQQEVVSR	73.11	0.0015390999999999998	74879000.0	682.51	478.09	881.5	719.5	567.42	635.97	588.34	479.46	841.52	702.53	True	False	652.5076776143992	557.0862463594757	696.485196410254	656.4225520958154	642.0456756975361	758.8622017584557	720.2902215806419	462.5971200394848	802.3979188773152	575.295009345113	1.134214041517901	0.9683488250552263	1.2106574628608335	1.1410190275126042	1.116028585800542	1.3190835822168985	1.252036276832271	0.8041041770309848	1.3947590468249058	1.0	9.168158144745206	-6.7708467598415405	24.998130821444676	1.1551905724470106	1.0512814171830418	0.0618608243462212	0.16110418092945927	515.5632977119474	1370012.3924207517	0.04054599654248515	0.08622662188365933	1.6949357504930485e-07	6.7708467598415405	-0.10390915526396882	
YQEQGGEASPQRT(ph)WEQQQEVVSR	ddPTM_K562_Methotrexat_30min_R1	1	YQEQGGEASPQRTWEQQQEVVSR	23	1	H0Y5J4;Q9UJU6-5;Q9UJU6	H0Y5J4	DBNL	Drebrin-like protein	1	YQEQGGEAS(0.06)PQRT(0.94)WEQQQEVVSR	67.13600000000001	0.029425	71673000.0	528.33	316.43	445.62	358.42	554.76	427.08	216.82	364.8	404.82	430.6	True	False	505.1052458044797	368.7146791096424	352.0904517576147	326.9978750829496	627.7206637939537	509.60716563202845	265.4474042953303	351.9697772293917	386.00000655945774	352.6141674006886	1.4324587396130055	1.0456604220631278	0.9985147629009506	0.9273531959689235	1.7801912737120722	1.445226008326951	0.7527984659609338	0.9981725346543872	1.0946809352694884	1.0	8.461946630479627	-8.759128777568675	24.99999011028686	0.9612607075385415	1.2563605719729243	0.2687749842576599	0.24986498836535925	99.21830146779807	1073526.785157189	0.10805505892320803	0.0796224348227098	1.7412904671023674e-09	8.759128777568675	0.29509986443438274	
YQLPAPPES(ph)S(ph)S(ph)ILYKVFAVT(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	YQLPAPPESSSILYKVFAVTR	21	1	H0YCY3;E5RFG6;E7EWW7;E7ERK7;Q96DN5-3;Q96DN5-2;Q96DN5	H0YCY3	TBC1D31	TBC1 domain family member 31	4	Y(0.009)QLPAPPES(0.98)S(0.825)S(0.823)ILY(0.391)KVFAVT(0.973)R	42.716	0.032917	17690000.0	192.83	95.396	228.26	265.39	175.95	170.91	205.93	133.9	173.84	120.72	True	False	184.3534240881226	111.1585675452499	180.3513453574641	242.1236707445564	199.09050903912717	203.93593864889496	252.11504458323677	129.19066110475754	165.7582163437975	98.85643819928265	1.8648600682586636	1.1244443919896006	1.8243763243209064	2.449245341577696	2.013935689628881	2.062950500378991	2.550314872512433	1.3068512628820872	1.6767569150089034	1.0	6.6272630219517135	-6.980299124537787	23.82178961757312	1.9379937719075737	1.4895911320100303	0.07288140768296192	0.47731262827437315	280.76104003932204	339481.2745924321	0.1229171718032187	0.25580653507722245	1.046407576421152e-07	6.980299124537787	-0.44840263989754336	
YQPLASTAS(ph)DNDFVTPEPR	ddPTM_K562_Methotrexat_30min_R1	2	YQPLASTASDNDFVTPEPR	19	0	Q15021	Q15021	NCAPD2	Condensin complex subunit 1	1	YQPLAS(0.022)T(0.232)AS(0.746)DNDFVTPEPR;YQPLAS(0.009)T(0.116)AS(0.875)DNDFVTPEPR	200.39	2.0206e-20	246630000.0	3073.7	2505.01	3515.1000000000004	3248.9	2818.0	2415.2400000000002	3016.3	3108.3	2831.2200000000003	2604.88	True	False	2938.583828344462	2918.920324610323	2777.3285466837015	2964.0739812426605	3188.6163937042343	2881.9509476470475	3692.782056895146	2998.9793271987874	2699.5972001661657	2133.1109901967156	1.3776047481118014	1.3683865199818506	1.302008455934858	1.3895545027262333	1.4948197296616899	1.351055318214489	1.731172017708557	1.4059180891108818	1.2655680893178507	1.0	11.058743318713988	-10.056080298148057	2.724983738507784	1.0015157548857399	1.4295436676919167	0.5797766713338492	0.11237804957714195	0.23284110058717158	4.088169229241852	0.1132178969833096	0.030513016936544658	8.78860006464529e-11	10.056080298148057	0.4280279128061768	
YQPLASTASDNDFVT(ph)PEPR	ddPTM_K562_Methotrexat_30min_R1	4	YQPLASTASDNDFVTPEPR	19	0	Q15021	Q15021	NCAPD2	Condensin complex subunit 1	1	YQPLAST(0.027)AS(0.035)DNDFVT(0.938)PEPR;YQPLASTASDNDFVT(1)PEPR;YQPLASTASDNDFVT(1)PEPR;YQPLASTASDNDFVT(1)PEPR	209.73	1.4853e-26	106657000.0	7091.200000000001	5842.1	7342.599999999999	7256.4	5749.8	5998.700000000001	6108.8	6576.6	7076.2	7906.2	True	False	6779.47933876313	6807.407726278928	5801.488602566002	6620.2426782878	6505.999482086808	7157.863876737029	7478.853903511276	6345.297250347634	6747.2290065116185	6474.310567355604	1.047135330971954	1.0514490547615754	0.8960782066615608	1.0225401777400063	1.0048945620389271	1.1055793203415354	1.1551583486310841	0.9800730416519601	1.0421540542914498	1.0	12.660510856764198	-8.149060099106647	8.703549589758426	1.0614518487031546	1.0016932386377972	0.15031104617858027	0.061345077147825305	0.6093284091071502	43.18716759407354	0.021147723228054027	0.02116124791847162	7.094795810391089e-09	8.149060099106647	-0.05975861006535732	
YQPPS(ph)TNK	ddPTM_K562_Methotrexat_30min_R1	1	YQPPSTNK	8	0	P05019-4;P05019	P05019-4	IGF1	Insulin-like growth factor I	1	YQPPS(0.5)T(0.5)NK	72.848	0.033415	10438000.0	1696.3	2050.1	1954.8	2032.7	1823.9	2163.8	2087.9	2290.5	2018.8	2255.4	True	False	1621.7326830922705	2388.844179258216	1544.5141939225923	1854.4963469703453	2063.7748191899072	2581.923726221281	2556.1647238641294	2209.941816732241	1924.9464286404648	1846.9252047271548	0.878071661451958	1.2934168493364184	0.8362624485114234	1.004099322605925	1.1174111511975318	1.3979579246701044	1.38401095903705	1.1965518750168957	1.042243845995288	1.0	10.850909727076566	-7.993192981464296	5.594632740630743	1.2311906550283407	1.0158619029793585	0.24025745234394014	0.1643594634912443	0.228215460197332	24.680899558623864	0.0529906685385855	0.05781951041462994	1.0157972167352154e-08	7.993192981464296	-0.21532875204898216	
YQQITPVNQS(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	YQQITPVNQSR	11	0	Q9NYL2	Q9NYL2	ZAK	Mitogen-activated protein kinase kinase kinase MLT	1	YQQITPVNQS(1)R;YQQITPVNQS(1)R	169.09	0.00027689999999999995	71352000.0	4085.8	3398.8	2343.58	3231.4799999999996	2440.34	2945.88	2717.8	3123.4	4026.5	4547.7	True	False	3906.1931241987827	3960.3939302779513	1851.6945849156482	2948.181165596364	2761.2874841065263	3515.1296176174974	3327.335833381832	3013.5482516400284	3839.308893858149	3724.0674618859985	1.0489050384228404	1.0634592339721658	0.49722369529199806	0.7916562188439255	0.7414708547487251	0.9438952579654162	0.8934681950409008	0.809208824083402	1.0309450441356367	1.0	11.862663492372658	-9.765229396915093	24.88159096474822	1.0154726254402702	0.8433011751918222	0.15699810869337494	0.15421600483551362	184.12271856043122	1208680.03153308	0.13736198293729834	0.040759472914207694	1.7170012173898173e-10	9.765229396915093	-0.17217145024844793	
YQQPFEDFRIS(ph)QEHLADHFDSR	ddPTM_K562_Methotrexat_30min_R1	3	YQQPFEDFRISQEHLADHFDSR	22	1	P19174-2;V9GY71;V9GYH5;P19174	P19174-2	PLCG1	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1	1	YQQPFEDFRIS(1)QEHLADHFDSR;Y(0.004)QQPFEDFRIS(0.996)QEHLADHFDSR;Y(0.006)QQPFEDFRIS(0.99)QEHLADHFDS(0.003)R	84.946	0.0010437	60001800.0	5524.629999999999	3802.33	4778.24	5635.1900000000005	4176.2300000000005	3952.34	4216.34	5131.36	5519.43	5370.01	True	False	5281.773880205181	4430.60040394073	3775.3527225131397	5141.161641896895	4725.477445663393	4716.07376841363	5161.961574700549	4950.887160317463	5262.8329040177505	4397.4491525391795	1.2010994776722714	1.0075387458164031	0.8585324335889527	1.1691236131583875	1.0745951304371089	1.0724566913276234	1.1738536127745614	1.1258543279479916	1.196792213271842	1.0	12.102451180652972														
YQVS(ph)DGSLTVTSVSR	ddPTM_K562_Methotrexat_30min_R1	1	YQVSDGSLTVTSVSR	15	0	H0YDP1;Q9UPX0;Q9UPX0-2	H0YDP1	IGSF9B	Protein turtle homolog B	1	YQVS(0.524)DGS(0.206)LT(0.206)VT(0.063)S(0.001)VSR	119.17	0.00078886	119700000.0	124.13	118.01	0.0	0.0	0.0	0.0	55.593	0.0	0.0	54.592	True	False	118.67339382906525	137.50914667297315	0.0	0.0	0.0	0.0	68.06114540628309	0.0	0.0	44.7048597927041	2.6545971596679276	3.075932847359357	0.0	0.0	0.0	0.0	1.5224551809776792	0.0	0.0	1.0	5.482359767855958	-6.760383722573011	24.99992085153423	0.28892202732329536	2.865265847946462	0.798934474708887	0.5115521681857594	10.782821920930164	255324.29907063436	0.13426591370752305	0.3165448316665694	1.736266066213156e-07	6.760383722573011	2.5763438206231664	
YQYGGLNSGRPVT(ph)PPR	ddPTM_K562_Methotrexat_30min_R1	1	YQYGGLNSGRPVTPPR	16	1	P62140	P62140	PPP1CB	Serine/threonine-protein phosphatase PP1-beta catalytic subunit	1	YQYGGLNSGRPVT(1)PPR	138.81	8.218799999999999e-15	0.0	1301.3	1311.5	1912.4	1624.5	1397.3	1371.4	1410.4	1672.9	1551.5	1794.8	True	False	1244.0964101326244	1528.20308331162	1511.013374492308	1482.0826071989593	1581.0694417753477	1636.4036408817192	1726.7181026572002	1614.0631587912535	1479.3711036435911	1469.7443280324107	0.8464713123255473	1.0397747786225306	1.0280790649589684	1.0083948472746047	1.0757445438772137	1.113393404329323	1.1748425013272938	1.098193153738546	1.0065499661591264	1.0	10.521349494988739	-5.313826856565632	0.8676484067221388	1.0807445592275429	1.1292985433723293e-12	0.5857057444832494	0.05367465557849655	7.35923335384029	1.2678516077984219	0.019415800930579576	11.150547533928274	4.854820123356511e-06	5.313826856565632	-1.0807445592264135	
YRDFDIPAEFSGVWR	ddPTM_K562_Methotrexat_30min_R1	2	YRDFDIPAEFSGVWR	15	1	O15247	O15247	CLIC2	Chloride intracellular channel protein 2	0	;	171.15	2.0365e-09	14936900.0	2617.0	2532.8	3047.6000000000004	2893.3	2601.2	2271.0	2829.5	3278.3999999999996	3385.1	4304.6	False	True	2501.959813507323	2951.3021497610903	2407.950407918196	2639.6488811380445	2943.303393649205	2709.8386090435934	3464.087401778605	3163.0968137851905	3227.7274398607265	3524.995227573163	0.7097767945716725	0.837249970347608	0.6831074235456445	0.7488375758611597	0.8349808166054079	0.7687495823672996	0.9827211607782825	0.8973336443246401	0.9156685985310978	1.0	11.7834055889363	-8.752245633079747	24.99486107562065	0.9403753215058503	0.7660127987361015	0.7454640802495484	0.052896954553404305	101.38204370344671	275626.1028548847	0.020223184889002	0.015439254096832816	1.769108083571203e-09	8.752245633079747	-0.17436252276974884	
YRDVS(ph)PFDHSR	ddPTM_K562_Methotrexat_30min_R1	1	YRDVSPFDHSR	11	1	P18031	P18031	PTPN1	Tyrosine-protein phosphatase non-receptor type 1	1	YRDVS(1)PFDHSR	75.02	0.030563	22912000.0	2882.6	2121.7	3554.6	3040.9	2677.9	2331.6	2088.8	2987.3	3046.2	3324.8	True	False	2755.884355527782	2472.2748622663075	2808.5380364831417	2774.3090183018257	3030.090788041365	2782.1487013853116	2557.266571774218	2882.2349657822415	2904.5828268895307	2722.646502029284	1.0122079210333492	0.9080410771004	1.0315470753878035	1.0189751097816173	1.112921117663616	1.0218545445806786	0.9392576560593516	1.058615197982555	1.0668233370452769	1.0	11.410793965216605	-6.796127010748859	23.346113561885623	1.032200296525318	0.960124580430552	0.253645595088299	0.048780406378074244	105.21755441690982	70815.08809198062	0.013035164675475941	0.027138081157193093	1.5990903013768593e-07	6.796127010748859	-0.07207571609476604	
YRHLGS(ph)EDDETNDEESSTEIPQFSSCSHR	ddPTM_K562_Methotrexat_30min_R1	1	YRHLGSEDDETNDEESSTEIPQFSSCSHR	29	1	V9GYV0;O60307	V9GYV0	MAST3	Microtubule-associated serine/threonine-protein kinase 3	1	Y(0.197)RHLGS(0.673)EDDET(0.124)NDEES(0.003)S(0.001)T(0.001)EIPQFSSCSHR	48.788000000000004	0.012229	14707000.0	726.4	580.03	1146.1	959.16	740.88	582.08	580.99	1037.4	937.22	1044.9	True	False	694.468325766801	675.8700986757445	905.5492723832016	875.0719319919692	838.3187060921198	694.5587219516049	711.2917969815697	1000.9140539960827	893.6488467656116	855.658484711982	0.8116185816828096	0.7898830091111	1.058306892951588	1.0226883127168684	0.9797351642861358	0.8117242268513191	0.8312800138024615	1.1697588136848713	1.0443989777842466	1.0	9.740891284620272	-6.749060887161594	24.987384305247687	0.9846022749928444	0.8007506734050077	0.36597752163886466	0.09931417898950091	269.9058650673785	544825.8830014886	0.027908121772409894	0.07270708646513849	1.782128899256121e-07	6.749060887161594	-0.18385160158783664	
YRPENTPEPVSTSVSHYGAEPTT(ph)VSPCPSSSAK	ddPTM_K562_Methotrexat_30min_R1	1	YRPENTPEPVSTSVSHYGAEPTTVSPCPSSSAK	33	1	J3QRU1;P07947	J3QRU1	YES1	Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Yes	1	YRPENTPEPVSTSVSHY(0.004)GAEPT(0.096)T(0.449)VS(0.449)PCPS(0.001)SSAK	96.387	8.0789e-10	57730000.0	2250.5	1638.7	2425.7	2549.0	1697.9	1497.1	1372.4	1717.3	2145.9	2645.1	True	False	2151.570714672612	1909.4673218625626	1916.5787191518461	2325.533127577807	1921.2036106708372	1786.3933868776571	1680.1956353422713	1656.901585625094	2046.137577382393	2166.046758456947	0.9933168368929177	0.881544830187707	0.8848279528910921	1.073630159874515	0.8869631291059794	0.8247252188361123	0.7756968443927834	0.764942667629872	0.9446414623292919	1.0	11.080848671406038	-7.993084992755182	24.951996064932768	0.8434636791063034	0.9516828431587343	0.20925932662836533	0.08476027448372257	233.5213030354943	842626.6087066076	0.026127877113238687	0.02955795657025537	1.0160498293605632e-08	7.993084992755182	0.10821916405243093	
YRPENTPEPVSTSVSHYGAEPTTVS(ph)PCPSSSAK	ddPTM_K562_Methotrexat_30min_R1	1	YRPENTPEPVSTSVSHYGAEPTTVSPCPSSSAK	33	1	J3QRU1;P07947	J3QRU1	YES1	Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Yes	1	YRPENTPEPVSTSVSHY(0.001)GAEPT(0.044)T(0.181)VS(0.774)PCPS(0.001)SSAK	104.54	3.2748e-14	54191000.0	3067.8	2789.0	4644.1	3940.6	2446.0	2456.3	2659.0	3398.5	3088.4	4319.8	True	False	2932.943185279999	3249.834845105686	3669.3668753815796	3595.133716176192	2767.691873314607	2930.945211534029	3255.348436589261	3278.972828711864	2944.8209581004617	3537.4423602821525	0.8291140565880661	0.9186961974545003	1.0372937568059497	1.0163087762338658	0.7823991436269936	0.8285492491530666	0.9202548352843292	0.9269332174928576	0.8324717855941483	1.0	11.788490925267363	-6.260112703019777	23.121404198834547	0.9156393739797568	0.8291139792462682	0.09886305984676069	0.08028918184717004	111.85480874062503	1948744.250157725	0.02139932668511483	0.1286991492902912	5.493982819460576e-07	6.260112703019777	-0.08652539473348864	
YRPGTVALR	ddPTM_K562_Methotrexat_30min_R1	2	YRPGTVALR	9	1	K7EMV3;A0A590UJJ6;B4DEB1;K7EK07;K7ES00;Q71DI3;Q16695;P84243;P68431;K7EP01;Q5TEC6;Q6NXT2	K7EMV3	H3F3B;H3F3A;HIST2H3A;HIST3H3;HIST1H3A;HIST2H3PS2;H3F3C	Histone H3;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1;Histone H3.3C	0	;	114.86	0.012399	226290000.0	6792.5	5633.5	6704.0	7105.8	6057.5	5074.9	5417.9	6762.6	7176.5	7799.8	False	True	6493.909833109854	6564.34012187267	5296.922015580651	6482.845546466217	6854.1674254305935	6055.552601072355	6633.001991198554	6524.755524921832	6842.866081403955	6387.18063839269	1.016709907040303	1.0277367266576263	0.8293051841592508	1.0149776424825838	1.0731131329261137	0.9480791203356685	1.0384866761600975	1.0215392196209692	1.0713437538109047	1.0	12.640963537181927	-7.492891197080199	24.972360346642503	1.0251764608848664	0.9577729201622087	0.20402400363732298	0.06005834725928389	1092.047639263129	909410.979788514	0.016992909511064365	0.02516049132867954	3.2144657513873046e-08	7.492891197080199	-0.06740354072265764	
YRPYDGAASAYAQNYRYPEPERPSS(ph)R	ddPTM_K562_Methotrexat_30min_R1	2	YRPYDGAASAYAQNYRYPEPERPSSR	26	3	F1T0I1;O15027-2;O15027-4;O15027-3;O15027;O15027-5;A0A3F2YNX0;A0A3F2YNZ0	F1T0I1	SEC16A	Protein transport protein Sec16A	1	YRPYDGAASAY(0.002)AQNY(0.013)RY(0.013)PEPERPS(0.337)S(0.636)R;YRPYDGAASAYAQNY(0.001)RY(0.001)PEPERPS(0.391)S(0.606)R	47.821999999999996	0.017445	56071000.0	973.02	665.72	1013.66	1115.56	942.65	773.23	813.23	848.97	864.19	979.8	True	False	930.2472058612514	775.7189146947861	800.9066184835142	1017.760586818635	1066.6249977023765	922.6457541482947	995.6175288031161	819.1112438992233	824.0139955254621	802.3487255438793	1.15940510185353	0.9668101786650912	0.9982026430472766	1.2684766042704647	1.3293783161172907	1.1499311019941747	1.2408788063173253	1.0208918115299321	1.0270023112043916	1.0	9.648085602595243	-9.293999648498191	20.131047835382624	1.0179593998233543	1.1558478921355682	0.2785638862176282	0.10539267370041049	103.02812617406626	63695.45139902756	0.06531897777399862	0.03139353673267413	5.081598538460886e-10	9.293999648498191	0.1378884923122139	
YRS(ph)ARAQRSK	ddPTM_K562_Methotrexat_30min_R1	1	YRSARAQRSK	10	3	H7C3A3;Q6P3X3	H7C3A3	TTC27	Tetratricopeptide repeat protein 27	1	Y(0.001)RS(0.999)ARAQRSK	68.676	0.03038	8217800.0	3536.8	3161.3	3465.9	4381.1	3709.6	3278.8	3502.5	4241.7	4277.0	4609.8	True	False	3381.326506844745	3683.651092087702	2738.4549543259204	3997.015765096564	4197.477421605831	3912.3816958750044	4288.024783435084	4092.517006781552	4078.1632035344114	3774.920550124696	0.8957344828709177	0.9758221512677985	0.7254337986624544	1.0588344077770144	1.11193795097679	1.0364143149306195	1.1359245119194465	1.08413328239355	1.080330870380755	1.0	11.882230565352174	-7.407269139232773	8.160827959713496	1.0805674361823594	0.8771536717773804	0.6621702601590937	0.06755137009254704	0.16763834311268222	10.818688378542335	0.018194059665510517	0.027010433408646072	3.914991836127052e-08	7.407269139232773	-0.20341376440497905	
YRS(ph)DIHTEAVQAALAK	ddPTM_K562_Methotrexat_30min_R1	2	YRSDIHTEAVQAALAK	16	1	Q9P265	Q9P265	DIP2B	Disco-interacting protein 2 homolog B	1	Y(0.402)RS(0.598)DIHTEAVQAALAK;Y(0.044)RS(0.924)DIHT(0.031)EAVQAALAK	136.81	2.7025999999999998e-06	46586000.0	18270.0	12622.900000000001	21030.1	17434.0	12084.0	11095.3	11842.1	16193.4	16686.9	23235.8	True	False	17466.872675880302	14708.619672386014	16616.169403320793	15905.588288031191	13673.257807495373	13239.30969569412	14497.992373423722	15623.868943493508	15911.129661224766	19027.571460494477	0.9179769847216427	0.7730161309825807	0.8732680067879236	0.8359231928811711	0.7186023626758746	0.6957960832354202	0.761946547068543	0.8211173441619798	0.836214421491458	1.0	14.21580381790961	-10.288881758801482	1.7354587065033351	0.9997509793783036	0.7944105844418252	0.468521247686441	0.06377447419202584	1.081134909025148	5.012509856341887	0.06556748129629396	0.018563368300987964	5.1418362437712347e-11	10.288881758801482	-0.20534039493647838	
YRS(ph)PEPDPYLSYR	ddPTM_K562_Methotrexat_30min_R1	2	YRSPEPDPYLSYR	13	1	H3BRT8;H3BQR7;H3BV35;H3BRK0;H3BUL5;H3BVF8;H3BQG1;P49761-2;P49761-3;P49761-1;P49761	H3BRT8	CLK3	Dual specificity protein kinase CLK3	1	YRS(1)PEPDPYLSYR;Y(0.4)RS(0.6)PEPDPYLSYR	188.63	0.00015755	456977000.0	4496.9	4402.0	5127.0	5120.200000000001	4502.3	4069.5	4327.9	4689.3	4715.6	5660.9	True	False	4299.221660436023	5129.3556787935595	4050.912764600538	4671.320015623342	5094.4313659952395	4855.873280274283	5298.541744533534	4524.374661079457	4496.372785266979	4635.65615475745	0.9274246227308828	1.1065004624058319	0.8738596283598805	1.0076933792488667	1.098966617868532	1.0475050603765834	1.1429971438014837	0.9759944461014892	0.9699539040773055	1.0	12.178557844487203	-7.5254603845985635	24.98340512436382	1.044518558416116	0.9759506341124626	0.1485967778191155	0.07397938276563698	153.7188033179283	1487573.0291020193	0.02178130592747968	0.02828883113791361	2.982219567124757e-08	7.5254603845985635	-0.06856792430365344	
YRS(ph)PYSGPK	ddPTM_K562_Methotrexat_30min_R1	2	YRSPYSGPK	9	1	G3XAC6;Q14498-2;Q14498;Q5QP22;Q5QP23	G3XAC6	RBM39	RNA-binding protein 39	1	Y(0.001)RS(0.999)PYSGPK;Y(0.004)RS(0.996)PYSGPK	87.667	0.011646	627920000.0	11936.6	9522.0	16474.8	12647.5	9077.7	8496.5	8197.7	10304.4	10877.2	13989.7	True	False	11411.881356481274	11095.348653673842	13016.964621463025	11538.713311510528	10271.576663282092	10138.328375930812	10036.242902831062	9941.988411410486	10371.521346150219	11456.029767035332	0.9961462730586563	0.9685160460738895	1.1362544342298477	1.0072174694162472	0.8966087616879718	0.8849774819112116	0.876066412790782	0.8678389122223222	0.9053329606382675	1.0	13.483819525928578	-7.715475269906992	4.644821802137994	0.8955906619664679	1.033344681160569	0.5538071330087684	0.05346961038015892	0.14110560134884623	6.572348400291913	0.01612329874516258	0.020484894093360177	1.9254166812345315e-08	7.715475269906992	0.13775401919410124	
YRSQSGEDES(ph)MNQPGPIK	ddPTM_K562_Methotrexat_30min_R1	2	YRSQSGEDESMNQPGPIK	18	1	A0A0C4DG33;O43933-2;O43933	A0A0C4DG33	PEX1	Peroxisome biogenesis factor 1	1	YRSQSGEDES(0.999)MNQPGPIK;YRS(0.012)QS(0.012)GEDES(0.976)MNQPGPIK	76.301	0.015201	46574000.0	5604.4	4594.5	7557.700000000001	6966.8	4555.7	4309.2	4792.6	5769.7	5537.299999999999	8182.4	True	False	5358.037286519081	5353.663031853021	5971.442052081426	6356.031460654799	5154.854401986654	5141.891912853652	5867.462548776864	5566.776380702908	5279.872131618213	6700.48807092288	0.7996488061475052	0.798995979872798	0.8911950874138277	0.9485923104970713	0.7693252114508516	0.7673906525059214	0.8756768890073884	0.8308016254607222	0.7879832149139248	1.0	12.710050471554041	-12.151017520426345	5.031636885277243	1.0000089809905977	0.8320825614121538	0.4544917275584497	0.055844309763788756	5.964466537671572e-06	1.0063800553241485e-06	0.057321794758069713	0.013901833966608407	7.062890603824565e-13	12.151017520426345	-0.1679264195784439	
YRTEAHQDVVGR	ddPTM_K562_Methotrexat_30min_R1	3	YRTEAHQDVVGR	12	1	E9PMU0;A0A087WV29;Q9H0A0-2;Q9H0A0	E9PMU0	NAT10	N-acetyltransferase 10	0	;;	120.96	0.0038928000000000005	9686800.0	4866.889999999999	4612.700000000001	6522.0	5984.01	5233.23	5123.08	4927.59	5188.530000000001	5641.3099999999995	5472.41	False	True	4652.94734304954	5374.870272505919	5153.1213284034875	5459.401134074886	5921.4914726844645	6113.042704191563	6032.727492535866	5006.046459013199	5379.04672942032	4481.303520262893	1.0383022087235407	1.1993988463853495	1.1499157120473695	1.2182618538086913	1.3213770158413827	1.3641215500245663	1.3461992621695842	1.117096049481496	1.2003308200612044	1.0	12.129702728704084	-5.6934696560286016	0.9990928566026652	1.238746179154565	0.649278651224137	0.1826578990956894	0.10647380250024849	8.236882079779221	2.9908896683074073	0.03491635701344526	6.827981654367487	2.0254911220874143e-06	5.6934696560286016	-0.5894675279304281	
YS(ph)PSNGPPQPTPPPHYR	ddPTM_K562_Methotrexat_30min_R1	1	YSPSNGPPQPTPPPHYR	17	0	O75081;O75081-2;O75081-4;H3BNH2	O75081	CBFA2T3	Protein CBFA2T3	1	Y(0.345)S(0.479)PS(0.082)NGPPQPT(0.095)PPPHYR	71.268	0.031632	63767000.0	2256.9	1607.1	3055.3	2185.8	1969.6	1714.3	1593.3	2261.6	2198.8	2515.4	True	False	2157.6893783357564	1872.6459589707224	2414.034283144922	1994.174307673431	2228.636923009176	2045.564212894508	1950.6380834966799	2182.058246112918	2096.5782679287977	2059.836685275642	1.0475050734650937	0.9091235107894632	1.1719542138467556	0.9681225322028749	1.0819483597608348	0.9930710660300605	0.9469867671745299	1.0593355588386952	1.0178371338445402	1.0	11.008314242127366														
YS(ph)PSQNS(ph)PIHHIPSR	ddPTM_K562_Methotrexat_30min_R1	1	YSPSQNSPIHHIPSR	15	0	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4;E9PJA7;H0YF00	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	2	Y(0.041)S(0.635)PS(0.581)QNS(0.742)PIHHIPS(0.002)R	90.259	0.02194	12095000.0	1965.3	1645.1	2449.8	1945.8	1770.0	1657.8	1601.1	2024.9	2176.1	2675.6	True	False	1878.9077651837752	1916.9248130811625	1935.6204584978332	1775.2147350493915	2002.7860244345277	1978.1463875264049	1960.187432050796	1953.6831192757547	2074.9335859741013	2191.022912905904	0.8575482045926314	0.874899482698147	0.8834323215409298	0.8102218943456709	0.9140872113374104	0.9028414882721761	0.8946448804823515	0.8916762612421196	0.947015922906148	1.0	11.097388856239366	-10.177608760194738	0.3767867446762225	1.0127314258168822	0.8579805675312708	0.717887787567286	0.025597491805817076	0.9722218214280741	0.3405960460467538	0.05050821385133025	0.023386373593551908	6.643412813505412e-11	10.177608760194738	-0.15475085828561141	
YS(ph)PSQNS(ph)PIHHIPSRR	ddPTM_K562_Methotrexat_30min_R1	1	YSPSQNSPIHHIPSRR	16	1	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4;E9PJA7;H0YF00	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	2	Y(0.034)S(0.741)PS(0.269)QNS(0.956)PIHHIPSRR	61.276	0.023313999999999998	82868000.0	1401.0	1381.6	1803.6	1376.6	1166.9	1339.4	1161.0	1425.5	1632.0	1543.9	True	False	1339.413717510033	1609.8859168153524	1425.0490076523358	1255.9156153093797	1320.3678033404792	1598.2200937705804	1421.3838040165967	1375.3643570189079	1556.1286762142054	1264.2847493031186	1.0594240880057486	1.273357064302746	1.1271582675009182	0.9933803409411116	1.0443595116276407	1.264129852591775	1.1242592341638797	1.0878596437843746	1.230837180525948	1.0	10.304105716643852	-13.474195733982661	1.846247409656486	8.221612337904011e-05	1.1331999977039864	0.16536663447612543	0.09020918497414947	1511177.8423020318	98725.82002537296	6320676.090807305	0.02321176773099785	3.35586333357322e-14	13.474195733982661	1.1331177815806073	
YS(ph)PSQNSPIHHIPS(ph)R	ddPTM_K562_Methotrexat_30min_R1	1	YSPSQNSPIHHIPSR	15	0	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4;E9PJA7;H0YF00	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	2	Y(0.038)S(0.903)PS(0.08)QNS(0.031)PIHHIPS(0.949)R	138.82	1.7044e-05	14067000.0	2791.5	2639.7	3531.7	2495.7	2598.2	2475.6	1926.6	2349.8	2666.9	2852.4	True	False	2668.789002447721	3075.865557771775	2790.4444335361254	2276.9058558242195	2939.9088410654163	2953.9746633854325	2358.689092866817	2267.156202120683	2542.9164011002854	2335.8027196788776	1.1425575370571628	1.3168344791526916	1.1946404591564785	0.9747851719845779	1.2586289142901548	1.2646507508954097	1.0097980762652277	0.9706111663541379	1.08866916699621	1.0	11.189702714975985	-8.77577393662635	24.94058301843323	1.0148204603222328	1.1909627673317438	0.4700419633503412	0.09088159303169754	222.23378927304117	386659.1497959686	0.03967803396474501	0.026888493372646975	1.675814961253671e-09	8.77577393662635	0.17614230700951095	
YS(ph)PSQNSPIHHIPSRR	ddPTM_K562_Methotrexat_30min_R1	1	YSPSQNSPIHHIPSRR	16	1	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4;E9PJA7;H0YF00	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	Y(0.395)S(0.509)PS(0.095)QNSPIHHIPSRR	83.633	0.029110000000000004	6643600.0	1869.1	1286.2	1928.6	1678.2	1649.5	1251.4	1166.3	1671.6	1529.4	2022.7	True	False	1786.9366019971467	1498.7226883380906	1523.8132158784074	1531.0748115735896	1866.4381623190698	1493.2153392149498	1427.8724639315744	1612.8088805280995	1458.2985278198566	1656.3694296362587	1.0788273256103023	0.9048239248578818	0.9199718303259431	0.9243558738643323	1.1268248066670383	0.901498972691655	0.8620495152733756	0.9737011874713691	0.8804186443721684	1.0	10.693808765991838														
YSDVEVPASVTGYSFAS(ph)DGDSGTCSPLRHSFQK	ddPTM_K562_Methotrexat_30min_R1	1	YSDVEVPASVTGYSFASDGDSGTCSPLRHSFQK	33	1	E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;P35611;P35611-3;H0Y9H2	E7EV99	ADD1	Alpha-adducin	1	YSDVEVPASVT(0.002)GY(0.003)S(0.003)FAS(0.312)DGDS(0.312)GT(0.104)CS(0.132)PLRHS(0.132)FQK	43.835	0.021696	46953000.0	2307.1	1815.7	2451.5	2616.6	2059.2	1503.3	1677.7	2355.9	2409.6	2829.9	True	False	2205.6826464435385	2115.713563376978	1936.9636517297072	2387.2067405335797	2330.020893511626	1793.791449130441	2053.9669319540435	2273.0416616631696	2297.578221939799	2317.377687708333	0.951801106113501	0.9129774462742922	0.835842884827799	1.030132788969027	1.0054558244304994	0.7740608959190984	0.8863324018560058	0.980868018933501	0.9914560902724002	1.0	11.178277479394943	-9.361807143287404	5.665427667852787	0.9920594199763929	0.9135407148305955	0.20070637513497536	0.07060248129782616	0.42401276999925414	19.522205128597328	0.04239223369259896	0.01983067078328099	4.3470321953707626e-10	9.361807143287404	-0.0785187051457974	
YSDVEVPASVTGYSFASDGDSGTCS(ph)PLRHSFQK	ddPTM_K562_Methotrexat_30min_R1	1	YSDVEVPASVTGYSFASDGDSGTCSPLRHSFQK	33	1	E7EV99;E7ENY0;P35611-5;P35611-2;P35611-6;P35611-4;P35611;P35611-3;H0Y9H2	E7EV99	ADD1	Alpha-adducin	1	YSDVEVPASVT(0.002)GY(0.002)S(0.004)FAS(0.11)DGDS(0.11)GT(0.034)CS(0.369)PLRHS(0.369)FQK	66.633	6.2009e-05	39974000.0	2886.1	2074.0	3157.1	3088.7	1930.4	1901.4	1971.9	2150.8	2952.9	4009.6	True	False	2759.2304997185624	2416.693248027678	2494.4678543242344	2817.918466516113	2184.2814359143563	2268.818639909945	2414.148771008034	2075.1551449149556	2815.6203235250773	3283.422586181609	0.8403519276899885	0.7360286970670209	0.7597157505166359	0.8582259494636525	0.6652452977289539	0.6909919696168084	0.7352537505126687	0.6320097673836788	0.8575260264623589	1.0	11.680984725634254	-10.010135720122555	8.261215395118299	0.9999916323103928	0.7401189432633992	0.604014628946755	0.06643249946122058	0.08910580750328871	54.41949174301816	0.06518156136905627	0.016854199423115668	9.769318750694369e-11	10.010135720122555	-0.25987268904699357	
YSEEGLS(ph)PSK	ddPTM_K562_Methotrexat_30min_R1	1	YSEEGLSPSK	10	0	J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9	J3KPG5	BAZ2A	Bromodomain adjacent to zinc finger domain protein 2A	1	YSEEGLS(1)PSK	154.15	9.1171e-09	21866000.0	981.32	869.66	1310.1	1217.3	1011.3	688.75	743.73	1029.3	977.84	1314.2	True	False	938.1823477993905	1013.3565333074972	1035.1279135758064	1110.5811989801748	1144.3036759947104	821.8411897748894	910.5303846350251	993.0989355872057	932.3804318316785	1076.1856451416272	0.8717662719575903	0.9416187048045399	0.9618488392303192	1.031960613853032	1.0632957995310546	0.7636611708073231	0.8460718545592553	0.9227951887952499	0.8663750869014576	1.0	10.071711253098627	-8.25428085547687	24.99982885415082	0.8728485585941475	0.97482770867325	0.28820192403850065	0.07370662873416235	732.3059416761346	2557447.393674507	0.025378818725565393	0.024867214376060064	5.568255369409134e-09	8.25428085547687	0.10197915007910252	
YSEEGLS(ph)PSKR	ddPTM_K562_Methotrexat_30min_R1	2	YSEEGLSPSKR	11	1	J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;A0A0C4DGI9	J3KPG5	BAZ2A	Bromodomain adjacent to zinc finger domain protein 2A	1	YSEEGLS(0.79)PS(0.21)KR;YSEEGLS(0.917)PS(0.082)KR	118.61	0.0022081999999999996	24286000.0	3035.7	2517.0	4025.3	3029.9	2356.34	1843.53	1899.25	3133.12	2554.5	3650.9	True	False	2902.2542628445453	2932.891468315172	3180.4445389792345	2764.273371223226	2666.2400117604834	2199.7660814311466	2325.205159154628	3022.926393730679	2435.741852566905	2989.686632055676	0.9707553399497882	0.9810029709697526	1.0638053182157072	0.92460304755169	0.8918125341876402	0.7357848337163723	0.7777420998654437	1.0111181423894409	0.8147147685816541	1.0	11.54577855902799	-7.579083180140512	3.0392694885942046	0.8606286828164967	1.002511363022036	0.31994056283342553	0.08557027002688014	0.29341989679604236	5.51219127685104	0.026868370662436032	0.03731866513089734	2.635826499336347e-08	7.579083180140512	0.14188268020553918	
YSGGNYRDNYDN	ddPTM_K562_Methotrexat_30min_R1	1	YSGGNYRDNYDN	12	1	P98179	P98179	RBM3	RNA-binding protein 3	0		126.71	0.0010058	12068000.0	1647.6	1251.4	1679.6	1822.6	1350.3	1331.4	1218.9	1322.8	1233.0	1653.3	False	True	1575.173476780536	1458.1725798369505	1327.0749130920738	1662.8154877690513	1527.888117962679	1588.674206992796	1492.2693528990778	1276.276374229822	1175.6780991250712	1353.8713491954436	1.1634587567840948	1.077039248007936	0.9802075462197394	1.2281931283627516	1.1285327212741796	1.1734307014746173	1.1022238957829185	0.9426865964689086	0.8683824351728352	1.0	10.402874938866054	-9.257140572301136	4.358929041613534	0.9256029061682687	1.1222591115029485	0.6065144482778657	0.0683319811664649	0.13782800712762397	6.80589297191239	0.037823365253045256	0.019052201944526607	5.531710300103587e-10	9.257140572301136	0.19665620533467987	
YSHSGSSS(ph)PDTK	ddPTM_K562_Methotrexat_30min_R1	3	YSHSGSSSPDTK	12	0	Q9UQ35;Q9UQ35-2;I3L4D8;I3L182	Q9UQ35	SRRM2	Serine/arginine repetitive matrix protein 2	1	YSHSGS(0.012)S(0.008)S(0.979)PDT(0.001)K;YSHSGS(0.002)S(0.017)S(0.981)PDTK;YSHSGS(0.009)S(0.066)S(0.925)PDTK	234.49	1.7422e-45	14452800.0	9459.9	6962.610000000001	14588.8	10553.0	7103.8099999999995	6734.68	6246.5	9463.2	8437.4	11816.7	True	False	9044.054122964431	8113.062958365477	11526.810247748059	9627.834874589485	8038.085530078104	8036.061595576261	7647.436633755101	9130.37389220718	8045.147115618715	9676.581123835846	0.9346332146884666	0.8384224608401173	1.191206904611654	0.9949624512394893	0.8306741221109886	0.8304649640957824	0.7903035727068466	0.9435536968441034	0.831403882493322	1.0	13.24028169714871	-7.7532975263462935	24.76045558011818	0.8621761467188437	0.993378927795397	0.24926698192649477	0.1001645070232193	220.26068325406644	669837.9236818949	0.030292918547065995	0.03841258968370057	1.7648283583096258e-08	7.7532975263462935	0.13120278107655337	
YSIT(ph)FT(ph)GKWS(ph)QTAFPK	ddPTM_K562_Methotrexat_30min_R1	1	YSITFTGKWSQTAFPK	16	1	D6RBY3;D6RIH5;D6RB12;Q9BUD6	D6RBY3	SPON2	Spondin-2	3	Y(0.132)S(0.455)IT(0.535)FT(0.879)GKWS(0.987)QT(0.013)AFPK	56.54	0.033035	0.0	220.41	142.49	176.49	261.45	160.48	0.0	174.3	197.72	195.33	204.68	True	False	210.72104031148214	166.0340505841195	139.44716087855443	238.52908442731197	181.58593288206382	0.0	213.39121192083795	190.76607553123714	186.24915093438773	167.61046861024838	1.2572069158847148	0.9905947519913295	0.8319716664167125	1.4231156705490373	1.0833806169011624	0.0	1.273137732327719	1.138151316639019	1.111202375834177	1.0	7.3889684494350725	-6.264752488637699	6.090648487540731	0.9777661025499486	1.2639512321973905	0.04854979668799653	0.36305263819668887	0.4607403367579941	87.11980184435731	0.09305960871670714	0.5494918717450242	5.435600267755486e-07	6.264752488637699	0.2861851296474419	
YSLS(ph)PSK	ddPTM_K562_Methotrexat_30min_R1	2	YSLSPSK	7	0	F8VYC4;A0A286YES2;A0A1W2PNU4;P0DJD0;P0DJD1;J3KQ37;J3KNE0;Q7Z3J3;A6NKT7;Q99666;O14715;F8W705;Q99666-2;P49792	F8VYC4;P49792	RGPD1;RGPD2;RGPD8;RGPD3;RGPD4;RGPD5;RANBP2	RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;E3 SUMO-protein ligase RanBP2	1	YSLS(0.975)PS(0.025)K;YSLS(0.797)PS(0.203)K	104.01	0.011403	83708000.0	8463.0	6203.7	11982.4	8787.1	6818.2	6464.0	6121.0	7630.700000000001	8432.7	11150.900000000001	True	False	8090.976653310072	7228.755980129843	9467.457989184608	8016.748585852872	7714.912808926269	7713.076516449929	7493.79006407028	7362.323955878071	8040.665617592848	9131.363955569754	0.8860644141092319	0.7916403305467418	1.0368065532433246	0.8779355006393089	0.8448806603771928	0.8446795630947633	0.8206649193409248	0.8062677155023876	0.8805547185191732	1.0	13.156614656916021	-7.521369643831576	24.952634665364464	0.8538895861017566	0.9041596820579633	0.03576502945237503	0.07495346840909611	146.11278174708426	2415958.0743609564	0.02156443812683004	0.028252517617497624	3.010442636208044e-08	7.521369643831576	0.050270095956206684	
YSPPAIS(ph)PLVSEK	ddPTM_K562_Methotrexat_30min_R1	1	YSPPAISPLVSEK	13	0	Q14694;Q14694-3;Q14694-2	Q14694	USP10	Ubiquitin carboxyl-terminal hydrolase 10	1	YS(0.001)PPAIS(0.999)PLVSEK	186.05	0.00012251	14720000.0	2190.1	1619.1	3253.6	2173.7	1817.1	1689.1	1706.5	2562.0	2437.6	3067.7	True	False	2093.8258263516936	1886.628755005598	2570.713823074763	1983.1350958869684	2056.0804999999878	2015.4946695444871	2089.226065076935	2471.893007844576	2324.276508051317	2512.1098033792186	0.8334929562135933	0.7510136509430275	1.0233286059457718	0.7894301010327301	0.8184676072814201	0.802311533848282	0.8316619210938023	0.983990828951607	0.9252288673547494	1.0	11.294683809930058	-9.257662030674647	24.46375660294387	0.9659573917539879	0.835910403958947	0.4343798485843068	0.07006668777981906	234.0944799130751	1516112.4403540564	0.03432825756637678	0.018826198058696453	5.525072348847071e-10	9.257662030674647	-0.13004698779504087	
YSPSNGPPQPT(ph)PPPHYR	ddPTM_K562_Methotrexat_30min_R1	3	YSPSNGPPQPTPPPHYR	17	0	O75081;O75081-2;O75081-4;H3BNH2	O75081	CBFA2T3	Protein CBFA2T3	1	Y(0.128)S(0.001)PS(0.06)NGPPQPT(0.811)PPPHYR;YSPSNGPPQPT(0.999)PPPHY(0.001)R;YSPS(0.001)NGPPQPT(0.999)PPPHYR	235.79	2.8328999999999996e-68	17094900.0	4989.24	4259.5599999999995	4773.27	5374.29	3917.9500000000003	3675.9700000000003	3809.95	4215.96	4832.82	4722.27	True	False	4769.918983547292	4963.37988985958	3771.425857594069	4903.134339823516	4433.229098549861	4386.2991773165895	4664.428272276515	4067.6822971711226	4608.143253052411	3867.0211432681126	1.2334866572558014	1.2835150639142634	0.9752793475565914	1.2679357464489474	1.1464196688625377	1.134283732829457	1.2062070776097422	1.0518903689607	1.1916519414626108	1.0	11.917006937162627	-15.999999999993422	0.10887527572542484	0.4847326766183229	1.2570274332258164	0.26372511089314443	0.08855259061817417	235.96233743195876	1.7097682000070937	27.239279148125302	1.1178454292094862	1.0000000000151461e-16	15.999999999993422	0.7722947566074936	
YSPSQNS(ph)PIHHIPSRR	ddPTM_K562_Methotrexat_30min_R1	1	YSPSQNSPIHHIPSRR	16	1	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4;E9PJA7;H0YF00	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	1	YSPS(0.001)QNS(0.999)PIHHIPSRR	87.66799999999999	0.019593	20886000.0	4738.8	3742.8	4887.3	4718.4	3939.2	3688.7	3032.4	4659.4	4530.2	4243.6	True	False	4530.488026078904	4361.234083277721	3861.5225189062244	4304.745197788597	4457.273846018352	4401.489069651739	3712.4928917312036	4495.5262610269365	4319.591990799999	3475.0429186752503	1.303721459591644	1.2550158905491455	1.1112157775531322	1.2387602969317122	1.2826528910087664	1.2665999162190682	1.0683300835738954	1.293660644266435	1.2430327025850678	1.0	11.76281508067883	-13.178333586901793	2.187748734915164	0.4435018034535289	1.2266236670161734	0.46300747689324073	0.07400940226508713	3834157.1090671993	912976.5956815698	10541553.084919775	0.018642931649488482	6.632334369866416e-14	13.178333586901793	0.7831218635626445	
YSPSQNS(ph)PIHHIPSRRS(ph)PAK	ddPTM_K562_Methotrexat_30min_R1	1	YSPSQNSPIHHIPSRRSPAK	20	2	Q9NYF8-2;Q9NYF8;E9PK91;Q9NYF8-3;E9PK09;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8-4;E9PJA7;H0YF00	Q9NYF8-2	BCLAF1	Bcl-2-associated transcription factor 1	2	Y(0.004)S(0.006)PS(0.082)QNS(0.905)PIHHIPS(0.048)RRS(0.955)PAK	56.562	0.015144	7505000.0	2932.2	2307.7	4207.9	3771.9	2094.4	2452.6	2251.3	2908.0	2759.1	3832.3	True	False	2803.303998917146	2689.0082008068816	3324.719294355878	3441.2233832525462	2369.850310494732	2926.5302388993	2756.211333318317	2805.723991729909	2630.830043224643	3138.2333342537345	0.8932745593895637	0.8568541323732776	1.0594238669466207	1.096547967192778	0.7551542725099113	0.9325406772518472	0.8782684522639992	0.894045691601547	0.838315626345945	1.0	11.61573690836894	-7.7606298403215135	24.99999918506409	0.8799914642353448	0.97389851520417	0.2128315062437509	0.08788759447266971	36.796850904020665	1136317.3682580153	0.027443570209397	0.03338642974662551	1.7352823907316844e-08	7.7606298403215135	0.09390705096882523	
YSPTS(ph)PTYSPTTPK	ddPTM_K562_Methotrexat_30min_R1	1	YSPTSPTYSPTTPK	14	0	P24928	P24928	POLR2A	DNA-directed RNA polymerase II subunit RPB1	1	YSPT(0.016)S(0.511)PT(0.03)YS(0.335)PT(0.108)TPK	160.84	3.517e-06	7575300.0	3382.9	2744.9	5354.0	3815.8	2607.2	2439.9	2293.8	3685.5	3325.7	3974.7	True	False	3234.1917665700885	3198.448069677517	4230.268566739079	3481.274738411693	2950.092498816777	2911.37614363957	2808.2430401836973	3555.8788760387133	3171.08893289558	3254.843314369522	0.9936551330418085	0.9826734379369261	1.2996842422685102	1.0695675343395237	0.9063700503777472	0.8944750522356609	0.8627890097768552	1.0924884956336227	0.9742677685576501	1.0	11.668372379505254	-7.661975158486708	6.1839563392776	0.9524612002903636	1.097072202240205	0.2911027899898022	0.10045783225778371	0.27882450074923915	14.735150033197822	0.031661220361701305	0.04090562217923933	2.177834340257479e-08	7.661975158486708	0.14461100194984144	
YSPTSPT(ph)YSPTSPK	ddPTM_K562_Methotrexat_30min_R1	1	YSPTSPTYSPTSPK	14	0	P24928	P24928	POLR2A	DNA-directed RNA polymerase II subunit RPB1	1	YSPTS(0.003)PT(0.62)YS(0.363)PT(0.014)SPK	183.28	7.6144e-05	12252000.0	1633.5	1257.6	2041.2	1953.2	1374.7	1280.4	1051.9	1377.7	1769.4	1929.9	True	False	1561.6932958976727	1465.39702445497	1612.7800146484517	1781.965988538632	1555.4971456441488	1527.8191787844196	1287.8153518045287	1329.2455101122061	1687.1409802042992	1580.3764088866446	0.9881780613251915	0.9272455702419171	1.0205037265676693	1.1275579529778001	0.9842573812779052	0.966743853042421	0.8148788760468644	0.8410942498494033	1.0675564192918248	1.0	10.626052500380188	-8.391796188041164	3.487530693433748	0.9155920991941993	1.0122680808285238	0.15105649086111095	0.08277029434345785	0.4051019492195581	9.03472722574131	0.03218516560983444	0.02778602258448809	4.056988829853985e-09	8.391796188041164	0.09667598163432456	
YSPTSPTYS(ph)PTSPK	ddPTM_K562_Methotrexat_30min_R1	3	YSPTSPTYSPTSPK	14	0	P24928	P24928	POLR2A	DNA-directed RNA polymerase II subunit RPB1	1	YSPTSPT(0.006)YS(0.991)PT(0.003)SPK;YSPTSPTYS(0.875)PT(0.125)SPK;YSPT(0.002)S(0.002)PT(0.329)YS(0.645)PT(0.022)SPK	294.26	5.230299999999998e-167	66471000.0	11085.9	8346.3	16501.4	11474.800000000001	8103.8	8182.7	7398.099999999999	9822.699999999999	9351.9	13208.599999999999	True	False	10598.577109881853	9725.384212156901	13037.981644973534	10468.82209977632	9169.591742831932	9763.890967072219	9057.312248488532	9477.230073440634	8917.132210225263	10816.394546049074	0.9798622881922532	0.8991336411363907	1.2053907232642456	0.9678661457112147	0.8477493774652781	0.9026936772234048	0.837368885715889	0.8761912329559391	0.824408925937566	1.0	13.400932061952195	-7.58529713808762	5.556483248875125	0.8753949135165072	1.0262868690708502	0.379758368271747	0.08466984043946303	0.1974039793502688	11.945773086647943	0.0249048101016657	0.03254735424428756	2.5983811795352574e-08	7.58529713808762	0.15089195555434298	
YSS(ph)GFVTADMIKEHLPPPAK	ddPTM_K562_Methotrexat_30min_R1	1	YSSGFVTADMIKEHLPPPAK	20	1	Q6BCY4	Q6BCY4	CYB5R2	NADH-cytochrome b5 reductase 2	1	Y(0.093)S(0.103)S(0.711)GFVT(0.093)ADMIKEHLPPPAK	48.053000000000004	0.033852999999999994	0.0	642.75	733.11	819.37	731.71	759.46	886.89	873.28	828.55	855.39	707.75	True	False	614.4954796071193	854.2439667606418	647.3954343535673	667.562120353063	859.3423017610432	1058.268940543669	1069.1352699152574	799.4094268733894	815.6231056046998	579.569616762279	1.0602617215166503	1.4739281391816395	1.1170279042062143	1.1518238724837706	1.4827248994895432	1.8259565545475054	1.8447055176699896	1.3793156227533607	1.4072910001064505	1.0	9.178838155105502	-7.845887429530285	5.47300079376367	1.5484059149463814	1.2150696329442434	0.22737285664506568	0.24900085405677613	0.27623199572675783	13.590161750010047	0.07831423947559632	0.08987351627853386	1.4259771633838728e-08	7.845887429530285	-0.33333628200213794	
YSS(ph)PTAGSAK	ddPTM_K562_Methotrexat_30min_R1	2	YSSPTAGSAK	10	0	P28749;P28749-2	P28749	RBL1	Retinoblastoma-like protein 1	1	Y(0.015)S(0.423)S(0.553)PT(0.008)AGS(0.001)AK;YS(0.027)S(0.963)PT(0.01)AGSAK	103.08	0.0050107	22666000.0	6405.700000000001	5616.9	9069.3	8217.3	5077.0	5055.799999999999	4670.6	6116.700000000001	6464.1	7741.3	True	False	6124.113097968607	6544.997254024431	7165.777869317657	7496.902067181297	5744.714489296097	6032.761796390393	5718.100943186838	5901.572194021436	6163.585401909467	6339.275555269279	0.9660588255827077	1.0324519256122497	1.1303780387589208	1.1826117987487996	0.9062099350644293	0.9516484563249332	0.9020117351475416	0.930953725322128	0.9722854525208678	1.0	12.630102265005076	-7.781160705903581	24.999797376848807	0.9386970685934218	1.0783808670312494	0.5453314195995063	0.059840368298369105	188.74490363169897	239261.91791579232	0.019726179912281615	0.022396489046475808	1.655157377325687e-08	7.781160705903581	0.13968379843782752	
YSSEVATES(ph)PLDFTK	ddPTM_K562_Methotrexat_30min_R1	1	YSSEVATESPLDFTK	15	0	Q8WTT2	Q8WTT2	NOC3L	Nucleolar complex protein 3 homolog	1	YSSEVAT(0.02)ES(0.794)PLDFT(0.186)K	142.91	1.9804e-06	21038000.0	1485.8	1177.5	2097.8	1514.9	1343.2	1122.5	1034.3	1504.6	1511.6	1842.3	True	False	1420.486011046686	1372.061860922175	1657.500448133217	1382.0910690339822	1519.8543435143824	1339.4072385078966	1266.268103784984	1451.6823651846016	1441.3260459346773	1508.6416177479998	0.9415662370279121	0.9094683885032271	1.0986707702041416	0.9161162285162702	1.007432332261336	0.8878233390560145	0.8393432137151202	0.9622446763410761	0.9553800113814924	1.0	10.559034414778116	-8.261174240934395	24.999995299840332	0.9209976011808374	0.9746676249723117	0.1042659661852875	0.06489841099592573	51.71043001919694	4875874.636610929	0.022223290067298517	0.02091941592255809	5.480570378132774e-09	8.261174240934395	0.05367002379147434	
YSTPHAFTFNTSS(ph)PSSEGSLSQR	ddPTM_K562_Methotrexat_30min_R1	1	YSTPHAFTFNTSSPSSEGSLSQR	23	0	H7C155;P04049;P04049-2	H7C155	RAF1	RAF proto-oncogene serine/threonine-protein kinase	1	YSTPHAFTFNT(0.008)S(0.047)S(0.499)PS(0.305)S(0.122)EGS(0.019)LSQR	156.47	3.1506e-21	22381000.0	1263.8	1333.3	2009.4	1650.0	1217.3	1144.1	1039.1	1236.5	1261.2	1392.6	True	False	1208.2448652313926	1553.6051627749764	1587.654400075739	1505.3470617902638	1377.396286748107	1365.1811328079143	1272.1446259721326	1193.0115941451277	1202.5670872802425	1140.3866454300949	1.0595045724826997	1.3623494882203193	1.3922071136469314	1.3200321731429296	1.207832705045949	1.1971212906417705	1.1155379897423698	1.0461465845166797	1.0545257541372701	1.0	10.155307334378032	-8.709576221595126	1.1029210061026435	1.0245332537628982	1.2921847376542435	0.592708170959023	0.08644995529309017	0.3559932786143745	0.8686144527680317	0.0601789913226855	0.035803696172131035	1.951748159086466e-09	8.709576221595126	0.2676514838913453	
YSTPHAFTFNTSSPSS(ph)EGSLSQR	ddPTM_K562_Methotrexat_30min_R1	1	YSTPHAFTFNTSSPSSEGSLSQR	23	0	H7C155;P04049;P04049-2	H7C155	RAF1	RAF proto-oncogene serine/threonine-protein kinase	1	YSTPHAFTFNT(0.007)S(0.124)S(0.037)PS(0.197)S(0.316)EGS(0.316)LS(0.005)QR	125.91	8.568799999999999e-08	15620000.0	1437.0	1057.3	1589.7	1607.8	1387.8	1092.3	1319.8	1233.8	1679.6	1682.0	True	False	1373.831200615216	1232.0008539728371	1256.0436945358822	1466.846670270538	1570.32002526002	1303.371515921759	1615.7987463747672	1190.4065546755023	1601.5157626037874	1377.3735010867576	0.9974282208357088	0.8944566255999404	0.9119121963250016	1.064959264217865	1.1400829361251876	0.9462731168367836	1.173101373810292	0.8642583538424857	1.1627316492877058	1.0	10.427704111454899	-7.262260727757451	24.932139874839113	1.0490806628966642	0.930584771709391	0.23715010849882068	0.0949161594552027	95.7612781639675	2906879.144028797	0.024566251356625546	0.03896288359329133	5.4668766159537474e-08	7.262260727757451	-0.11849589118727322	
YSVGS(ph)LSPVSASVLK	ddPTM_K562_Methotrexat_30min_R1	1	YSVGSLSPVSASVLK	15	0	Q9UBU7	Q9UBU7	DBF4	Protein DBF4 homolog A	1	Y(0.283)S(0.003)VGS(0.67)LS(0.024)PVS(0.02)AS(0.001)VLK	101.2	0.0027930999999999997	9696400.0	4510.2	3074.0	5708.9	5174.9	3959.9	3217.4	2875.0	5205.2	4958.0	6285.2	True	False	4311.937008360996	3581.9262509339837	4510.67990673454	4721.22455155057	4480.69625884649	3839.117014855506	3519.7919350109514	5022.1301656645555	4727.503662175268	5146.889375166759	0.8377753423583714	0.6959400114982905	0.8763895195607141	0.917296682988762	0.8705639333274606	0.745910147861128	0.6838678041136079	0.9757602698623843	0.9185166646450599	1.0	12.329485058927252	-9.292265552874024	24.74926664377974	0.9603539083279271	0.807281936535844	0.48824921789398823	0.0753443197326661	612.2926201332015	491584.79512457247	0.0444720985322032	0.021367588856588026	5.101929429782402e-10	9.292265552874024	-0.1530719717920831	
YSVGSLS(ph)PVSASVLK	ddPTM_K562_Methotrexat_30min_R1	1	YSVGSLSPVSASVLK	15	0	Q9UBU7	Q9UBU7	DBF4	Protein DBF4 homolog A	1	YSVGSLS(0.928)PVS(0.071)AS(0.001)VLK	161.94	2.9444e-06	4215000.0	1784.5	1199.3	2458.7	2138.4	1314.2	1217.3	1112.3	2026.5	1761.5	2441.4	True	False	1706.0555166999684	1397.4639403855324	1942.6524701235285	1950.9297920801814	1487.0403352044375	1452.5259968246432	1361.7615893261514	1955.2268463688665	1679.6082494799773	1999.2388023503051	0.8533525433251543	0.6989980080131867	0.9716960614408575	0.9758362981884247	0.7438032582482257	0.7265395184992677	0.6811400357602425	0.9779856433710179	0.8401238748995017	1.0	10.96523509210726	-9.944756629245678	1.3974210968562948	0.9881678250958458	0.8166224797297255	0.18683263891395108	0.10947213451491729	0.7442082205159978	3.266298910845669	0.1099662614591042	0.03330641523333963	1.1356470334025682e-10	9.944756629245678	-0.17154534536612032	
YSVLNNDDYFADVS(ph)PLR	ddPTM_K562_Methotrexat_30min_R1	4	YSVLNNDDYFADVSPLR	17	0	H3BMC9;Q1ED39	H3BMC9	KNOP1	Lysine-rich nucleolar protein 1	1	YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR	158.02	1.0616e-10	111522600.0	6972.0	5369.53	6867.799999999999	6584.299999999999	6230.4	5582.8	5543.16	7467.200000000001	7308.299999999999	7800.4	True	False	6665.519228037084	6256.753566095494	5426.342634040094	6007.064641785232	7049.80680600953	6661.5970878769585	6786.354734774023	7204.574343550746	6968.538728171736	6387.671972578564	1.0434974207584988	0.9795045194798534	0.8495023941953609	0.9404153293363796	1.1036582398522379	1.042883403605307	1.0624144076131259	1.1278873389990964	1.0909355956421614	1.0	12.641074512300829	-7.755818230485092	24.99890939072698	1.0758261094327763	0.9476975391875705	0.5203468063908208	0.05532866975069324	109.13216564968317	485339.4628496381	0.017242216475467486	0.021633910507728237	1.7546147242329784e-08	7.755818230485092	-0.12812857024520585	
YSVLQQHAEANGVDGVDALDTAS(ph)HTNK	ddPTM_K562_Methotrexat_30min_R1	1	YSVLQQHAEANGVDGVDALDTASHTNK	27	0	Q99523-2;Q99523	Q99523-2	SORT1	Sortilin	1	YSVLQQHAEANGVDGVDALDT(0.121)AS(0.763)HT(0.115)NK	62.255	0.0014229000000000002	11400000.0	792.0	621.96	1106.7	1053.3	553.27	589.73	570.0	765.11	736.17	1142.2	True	False	757.1846283140236	724.7283184876061	874.4187939503436	960.958824353749	626.0347026773394	703.6869761828614	697.837009723911	738.2006476315237	701.9456173827278	935.336511855705	0.8095317767631796	0.7748316347126738	0.9348708009008427	1.0273936836350048	0.6693149414591849	0.7523356217397612	0.7460812241140938	0.789235358905145	0.7504738759637104	1.0	9.86934169556874	-7.7759551969939595	24.99912768695231	0.7704987948589808	0.8821133437856975	0.18403425002110396	0.10259356582149093	374.61204950419125	645153.896010899	0.031809759560455016	0.036226333403582	1.6751156766256754e-08	7.7759551969939595	0.11161454892671674	
YSY(ph)YIETTNVHGS(ph)TRSVAVT(ph)YKTK	ddPTM_K562_Methotrexat_30min_R1	1	YSYYIETTNVHGSTRSVAVTYKTK	24	2	O75445-2;O75445;O75445-3	O75445-2	USH2A	Usherin	3	Y(0.117)S(0.125)Y(0.611)Y(0.156)IET(0.278)T(0.278)NVHGS(0.302)T(0.083)RS(0.085)VAVT(0.495)Y(0.388)KT(0.082)K	41.912	0.032876	0.0	149.83	0.0	53.821000000000005	0.0	158.66	0.0	0.0	0.0	171.14	128.07	True	False	143.24365260137643	0.0	42.524707607483016	0.0	179.52657098123277	0.0	0.0	0.0	163.18373875447256	104.87528197632648	1.3658476039541028	0.0	0.4054788393044047	0.0	1.7118101386536184	0.0	0.0	0.0	1.5559790226958157	1.0	6.712530879393825	-9.76718955525399	24.99998782872764	1.2779897062717285	0.418889947833669	0.23948432850038048	0.6000377357341232	211.06002788428324	917577.2971202467	0.5175820840480172	0.1480522614002993	1.709269112519383e-10	9.76718955525399	-0.8590997584380595	
YT(ph)PS(ph)S(ph)TSASEFSVPPY(ph)ATPEAQEEEIVHR	ddPTM_K562_Methotrexat_30min_R1	1	YTPSSTSASEFSVPPYATPEAQEEEIVHR	29	0	Q8N3K9	Q8N3K9	CMYA5	Cardiomyopathy-associated protein 5	4	Y(0.474)T(0.505)PS(0.505)S(0.506)T(0.506)S(0.16)AS(0.157)EFS(0.294)VPPY(0.718)AT(0.175)PEAQEEEIVHR	44.711000000000006	0.024380000000000002	0.0	465.77	465.7	616.24	718.99	692.38	604.07	623.54	772.21	623.99	819.27	True	False	445.2953084972505	542.6490094534663	486.89964541787316	655.9572630039888	783.4401059875578	720.7979782320399	763.3847176197322	745.0509366072058	594.9808410973668	670.892264111384	0.6637359413989621	0.8088467232100529	0.72574938103182	0.9777385999118995	1.16775844334	1.0743870764209176	1.137864838299868	1.1105373790440811	0.8868500546588296	1.0	9.389937298209862	-7.371534599902843	3.533222291839653	1.0730177392891191	0.7385899349442969	0.7645616439723302	0.0816392386959177	0.11130010758673013	2.552297697700564	0.02357026282319329	0.03674940017328867	4.250748400744e-08	7.371534599902843	-0.3344278043448222	
YTEFY(ph)HVPTHSDASK	ddPTM_K562_Methotrexat_30min_R1	1	YTEFYHVPTHSDASK	15	0	Q96HC4;Q96HC4-7;Q96HC4-4;H0YBI4;Q96HC4-3;Q96HC4-2;Q96HC4-6	Q96HC4	PDLIM5	PDZ and LIM domain protein 5	1	Y(0.041)T(0.049)EFY(0.91)HVPTHSDASK	98.654	0.003699	18781000.0	1337.3	968.52	1263.7	1559.3	995.41	801.21	658.18	954.38	1357.6	1345.7	True	False	1278.5138932378068	1128.551467974815	998.4666394822892	1422.5985899694294	1126.3238624759165	956.0324931535961	805.7936194036553	920.8139144522664	1294.485472321327	1101.9806899003868	1.160196276536731	1.0241118363669603	0.9060654588897972	1.2909469312915318	1.022090380347527	0.8675582992656762	0.7312229940040916	0.8355989563986853	1.1746897964594476	1.0	10.105883228327025	-8.09831031571736	5.131106210369397	0.901316894775931	1.085384819629434	0.24053382968290593	0.14253763651234697	0.32243187953374036	13.201875534633198	0.048729393220479776	0.049148394979770166	7.974247011047186e-09	8.09831031571736	0.18406792485350298	
YTGEDFDEDLR	ddPTM_K562_Methotrexat_30min_R1	2	YTGEDFDEDLR	11	0	A0A2R8Y6H2;A0A2R8YFZ7;Q14204;A0A2R8Y706	A0A2R8Y6H2	DYNC1H1	Cytoplasmic dynein 1 heavy chain 1	0	;	133.23	6.0239e-12	7824100.0	1375.97	1326.04	1549.8600000000001	1426.99	1373.02	1272.78	1180.98	1482.5500000000002	1411.08	1267.37	False	True	1315.4840063399577	1545.1455711738772	1224.565566090069	1301.8880022449027	1553.5961961972291	1518.7267216285784	1445.8448276206038	1430.4078761826606	1345.4791987943263	1037.8370119336057	1.267524660629577	1.4888133236789265	1.1799208854659822	1.2544243337586705	1.496955859478076	1.4633576410991758	1.3931328435924966	1.3782586858389756	1.296426301358774	1.0	10.019364176779657	-10.217700586810132	2.767834351141248	1.0000538096597549	1.3678528297177033	0.5448565664434553	0.09977001660149296	0.8809197819280425	9.903299620702068	0.10009919339020092	0.026853578268089595	6.057583553857085e-11	10.217700586810132	0.3677990200579484	
YTGEEDGAGGHS(ph)PAPPQTEECLR	ddPTM_K562_Methotrexat_30min_R1	4	YTGEEDGAGGHSPAPPQTEECLR	23	0	J3KS37;O94762-4;O94762;J3KSV9	J3KS37	RECQL5	ATP-dependent DNA helicase Q5	1	YTGEEDGAGGHS(1)PAPPQTEECLR;YTGEEDGAGGHS(1)PAPPQTEECLR;YTGEEDGAGGHS(0.999)PAPPQTEECLR;Y(0.004)T(0.004)GEEDGAGGHS(0.992)PAPPQTEECLR	90.397	0.00016508	106781000.0	4097.780000000001	3541.99	4994.45	3202.05	3991.99	3532.32	3345.36	4565.04	4356.55	4823.860000000001	True	False	3917.64649774323	4127.243643964106	3946.1831981976115	2921.3312480033424	4517.006656317731	4214.8908478629955	4095.6421383333027	4404.4849557106945	4154.014941397669	3950.212209840888	0.9917559588275968	1.0448156769102661	0.9989800518480401	0.7395378002036532	1.1434845563650549	1.0670036504273699	1.0368157255273818	1.1149995802094146	1.051592856467068	1.0	11.94771444323321														
YTVQDESHSEWVSCVR	ddPTM_K562_Methotrexat_30min_R1	1	YTVQDESHSEWVSCVR	16	0	P63244;D6RFX4;D6R9L0;D6R9Z1;D6RFZ9;D6RHH4;D6RBD0;H0YAF8;H0YAM7;J3KPE3;H0Y8W2	P63244	GNB2L1	Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed	0		111.7	0.0015693	22369000.0	1767.1	1291.1	1405.2	1335.1	1443.9	1229.7	1372.7	1598.5	1935.2	2092.9	False	True	1689.4203998657956	1504.4323300523301	1110.2677231942014	1218.0538558764729	1633.798158576843	1467.3221213302102	1680.562917978968	1542.2798489615755	1845.2329743932178	1713.8555293843492	0.9857425966777192	0.8778058034989402	0.6478187362694634	0.7107097622831849	0.9532881451003841	0.8561527481008281	0.9805744353391673	0.8998890644625063	1.0766560790897364	1.0	10.743029786279795	-8.65836343276771	1.086467119127717	1.0026403649025066	0.8124769820450729	0.35668561187015557	0.1013655949630655	0.6162406706575471	1.4699053510112847	0.07216488090713456	0.04497293534372148	2.1960213963546838e-09	8.65836343276771	-0.19016338285743373	
YVDEENS(ph)DGETSNHR	ddPTM_K562_Methotrexat_30min_R1	2	YVDEENSDGETSNHR	15	0	H0YFD2;F8WFC1;A0A494C108;Q8N9T8;H0YH26	H0YFD2	KRI1	Protein KRI1 homolog	1	YVDEENS(1)DGETSNHR;YVDEENS(1)DGETSNHR	208.4	2.8923e-19	95038000.0	9653.2	8525.5	11296.9	10109.7	9093.2	7778.3	8103.200000000001	9568.3	10044.3	9766.6	True	False	9228.856886415315	9934.193966277711	8925.835071272832	9223.398297321839	10289.115184964996	9281.346390455205	9920.54887227157	9231.777465635932	9577.342685354373	7997.774099711023	1.1539281769347265	1.2421198501513884	1.1160399081033485	1.153245663397157	1.2864973499735088	1.1604911910165805	1.2404137386963732	1.1542933509424198	1.1975010254041087	1.0	12.965382816894243	-11.50808793953639	1.0517737385730954	0.9948561580568093	1.1908559784771655	0.5639700436273578	0.04992912227374601	32.260791205686296	20.354008309194946	0.7624796943708626	0.014664420322434	3.1039310148834796e-12	11.50808793953639	0.19599982042035624	
YVEVFKNSDKEDDQEHPS(ph)EK	ddPTM_K562_Methotrexat_30min_R1	1	YVEVFKNSDKEDDQEHPSEK	20	2	H7C2J6;A0A0A6YY98;Q9NQA5	H7C2J6	TRPV5	Transient receptor potential cation channel subfamily V member 5	1	YVEVFKNSDKEDDQEHPS(1)EK	53.778999999999996	0.029947	24583000.0	449.07	639.06	1008.8	730.1	704.17	736.15	658.78	363.58	377.29	359.97	True	False	429.3294205012353	744.6538028373037	797.0666660676851	666.093266553377	796.7806976418423	878.4005689332627	806.5281846770487	350.7926853208941	359.7498702505257	294.77594481938183	1.4564601625288605	2.526168827288725	2.7039745951999987	2.2596595083819087	2.7030044738896657	2.9798923025129658	2.7360719178467328	1.1900315866541804	1.2204180041589057	1.0	8.203474987933053	-9.268439086961475	24.259285095197335	1.1539183398192001	2.510322895258816	0.709620340106114	0.3936003629752429	207.94853361309137	720691.8419296702	0.21593720721445883	0.10740864023119327	5.389654339920517e-10	9.268439086961475	1.3564045554396158	
YVEVS(ph)PATER	ddPTM_K562_Methotrexat_30min_R1	1	YVEVSPATER	10	0	Q9NTZ6	Q9NTZ6	RBM12	RNA-binding protein 12	1	YVEVS(0.959)PAT(0.041)ER	115.0	0.0030449	12737000.0	1763.7	1433.1	2024.6	2169.6	1653.3	1705.3	1602.1	1937.1	1913.8	2248.1	True	False	1686.1698597947511	1669.8954164650272	1599.664127796029	1979.3945365213083	1870.7379289251987	2034.8250902695015	1961.411707506451	1868.9710950412675	1824.8278557222707	1840.947305465602	0.9159251081161688	0.9070848532748669	0.8689353155556242	1.0752043421583384	1.0161822249725188	1.1053141413816105	1.0654360946036865	1.0152224832793777	0.9912439374579195	1.0	10.846232616818966	-7.260508551841729	24.999468735367863	1.0419985273764036	0.898292063245366	0.7674242669117213	0.03554464328895989	39.0159027301265	1047848.7038211171	0.010174017059932443	0.01640785113436984	5.488977469666636e-08	7.260508551841729	-0.1437064641310376	
YVIS(ph)DEEEEDDD	ddPTM_K562_Methotrexat_30min_R1	3	YVISDEEEEDDD	12	0	Q8WVC0-2;Q8WVC0	Q8WVC0-2	LEO1	RNA polymerase-associated protein LEO1	1	YVIS(1)DEEEEDDD;YVIS(1)DEEEEDDD;YVIS(1)DEEEEDDD	163.84	4.0103e-08	81750000.0	8123.200000000001	6711.2	9194.8	8296.8	6958.9	7182.5	7529.0	7633.400000000001	7436.200000000001	8592.400000000001	True	False	7766.113854445044	7820.111729104799	7264.937134376637	7569.432425613006	7874.117325105891	8570.4164726797	9217.5699056339	7364.928995347695	7090.492685088285	7036.233097941652	1.1037317477041668	1.1114060066305165	1.0325037606417402	1.0757790880787241	1.1190813629254763	1.2180404420067965	1.3100148584233753	1.0467147538790604	1.0077114538974705	1.0	12.780587562195393	-9.506455657802809	24.890459273679188	1.0116414604604684	1.1366147179508144	0.3714965112044265	0.07308418330810941	819.7948407656173	1242472.67022368	0.04701797167469043	0.021615865763753312	3.1156189896746063e-10	9.506455657802809	0.12497325749034593	
YVIYIER	ddPTM_K562_Methotrexat_30min_R1	1	YVIYIER	7	0	J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;P61254;J3KS10	J3QRI7	RPL26;RPL26L1	60S ribosomal protein L26-like 1;60S ribosomal protein L26	0		95.79299999999999	0.0019590999999999996	0.0	3121.0	1654.1	4170.7	2845.5	1924.2	1890.8	2049.9	2203.0	2516.9	3736.9	False	True	2983.804576979883	1927.4119101073188	3295.3270659878012	2596.0394329237565	2177.2660272411954	2256.1703399293797	2509.642256549201	2125.5192413277127	2399.8898683600087	3060.111198698636	0.9750641016734282	0.6298502848285328	1.0768651372503046	0.8483480711510634	0.7114989900259554	0.7372837761218789	0.8201147257709029	0.6945888901787705	0.7842492355769954	1.0	11.579368363363104	-5.934388473518201	17.484709839884445	0.8059412303899742	3.34884303842178	0.12258510621709895	0.1306020244662476	25320865.14350171	110188764.84854591	0.031790148322103993	2380348231.3693156	1.1630851920199906e-06	5.934388473518201	2.5429018080318055	
YVSFEDR	ddPTM_K562_Methotrexat_30min_R1	1	YVSFEDR	7	0	Q13643	Q13643	FHL3	Four and a half LIM domains protein 3	0		108.24	3.635e-05	0.0	894.73	821.51	1040.9	1228.5	1139.7	929.89	805.38	1434.3	1285.9	919.25	False	True	855.3987405194523	957.2505642175586	822.4293147401404	1120.7993123692966	1289.5905265808074	1109.5780819742606	986.0069664762165	1383.8548560310205	1226.1187896714757	752.7649172853756	1.1363424634668087	1.2716460906143183	1.0925446920480684	1.4889101320119011	1.7131384539430115	1.4740034458242637	1.3098471300070138	1.8383625807396609	1.6288203149704572	1.0	9.55605558240305	-7.3230982269822515	6.174047216493412	1.5308655336656358	1.177842083018953	0.304078663000784	0.2214044373431791	0.2448195502901699	19.08301240338271	0.06074875763139076	0.09129077579036869	4.7522772868695e-08	7.3230982269822515	-0.3530234506466827	
YVSQNCVTS(ph)PMNIDR	ddPTM_K562_Methotrexat_30min_R1	1	YVSQNCVTSPMNIDR	15	0	A0A1B0GWF6;A0A0C4DGF8;A0A1B0GV09;Q9H9B1-3;Q9H9B1	A0A1B0GWF6	EHMT1	Histone-lysine N-methyltransferase EHMT1	1	YVSQNCVT(0.141)S(0.859)PMNIDR	91.712	0.0083918	14442000.0	1785.7	1781.3	1995.3	1592.1	1503.7	1454.8	1734.8	1912.6	1717.7	2183.6	True	False	1707.2027661368081	2075.6295480770013	1576.5137973878388	1452.5230648947147	1701.4629067470055	1735.9195105401218	2123.873060472001	1845.332773927999	1637.8445019198177	1788.1288804833805	0.9547425718415242	1.1607829674536108	0.8816555756102232	0.8123145265133561	0.9515325910328416	0.9708022332656776	1.1877628529202322	1.031990923064312	0.9159543922119658	1.0	10.80423500805881	-8.547136318043101	24.996960870050035	1.0426914688804172	0.9530085623018145	0.121498931290562	0.10349227285145943	500.8396923134159	516100.70629131334	0.042209991655076586	0.03269707399408252	2.8370283911518537e-09	8.547136318043101	-0.08968290657860267	
YVVRY(ph)T(ph)S(ph)AKDGETR	ddPTM_K562_Methotrexat_30min_R1	1	YVVRYTSAKDGETR	14	2	A0A087WXC4;A0A087WXT0;Q9UQP3	A0A087WXC4	TNN	Tenascin-N	3	Y(0.073)VVRY(0.929)T(0.98)S(0.981)AKDGET(0.037)R	49.626999999999995	0.031564999999999996	5554700.0	939.24	1054.9	1305.1	868.12	1397.4	1325.3	1137.5	1666.9	1327.6	1885.7	True	False	897.9521342142215	1229.2042947658615	1031.1773452467637	792.0132674432512	1581.1825935281408	1581.3954683247348	1392.6133308086821	1608.2741821920863	1265.8801657732713	1544.181457193401	0.5815068753942157	0.7960232193177474	0.667782494371459	0.5129016824763332	1.023961650466902	1.0240995065430791	0.9018456505363049	1.0415059543035674	0.8197742304677385	1.0	10.592626578726044	-7.7710894791061484	24.9999999774267	0.970050643298619	0.6527463164379652	0.7541329501561239	0.0918974865225845	99.3907612292954	257485.62645463235	0.02810003447797488	0.03226031007978598	1.6939887464732182e-08	7.7710894791061484	-0.3173043268606538	
YYDSRPGGYGYGYGR	ddPTM_K562_Methotrexat_30min_R1	1	YYDSRPGGYGYGYGR	15	1	P98179	P98179	RBM3	RNA-binding protein 3	0		92.906	0.026543999999999998	23674000.0	2889.2	2091.9	2443.7	2676.4	1971.0	2280.2	1974.6	3185.1	2650.1	2906.4	False	True	2762.1942274303988	2437.5509187797015	1930.800765136401	2441.76416737907	2230.2210475482784	2720.816378838045	2417.454314738307	3073.078227668133	2526.8974294333743	2380.022796408176	1.1605746934857006	1.0241712484680165	0.8112530552439579	1.0259415040326805	0.9370586915864959	1.1431892093404228	1.0157273780682357	1.2911969718550114	1.0617114395907699	1.0	11.216759676727877	-8.266974427652313	24.846379947521953	1.1151499622931864	0.9854646321084968	0.19207232252756978	0.1114772247298773	645.0056685765524	2895368.1482982244	0.03872396629323122	0.03514159258900225	5.407861648530147e-09	8.266974427652313	-0.12968533018468964	
YYEVLGAAATTDYNNNHEGREEDQR	ddPTM_K562_Methotrexat_30min_R1	2	YYEVLGAAATTDYNNNHEGREEDQR	25	1	P46379-3;P46379;P46379-2;P46379-5;A0A0G2JK23;A0A024RCR6;A0A0G2JL47;A0A0G2JJM1;X6REW1;F6S6P2;P46379-4	P46379-3;P46379-4	BAG6;BAT3	Large proline-rich protein BAG6	0	;	101.62	3.1281e-06	30832000.0	1565.52	1140.47	1263.15	1417.93	1259.73	1347.6100000000001	1177.85	1466.7	1742.54	1973.67	False	True	1496.7016153007196	1328.9132828245542	998.0320769660941	1293.622278378345	1425.4065754581402	1608.016560076281	1442.0128454443998	1415.115329666526	1661.5296957416072	1616.219237746673	0.9260511076377334	0.8222357782829762	0.617510331307247	0.8004002477918211	0.8819388744842791	0.9949247741402781	0.8922136377084887	0.8755713931727942	1.0280348463480151	1.0	10.65840719547245	-7.886418691136018	3.2537792899383993	0.9458366677648745	0.7805458852461072	0.46322016916738473	0.08361159971593703	0.2395006939777531	5.025103704664355	0.0285071275935182	0.03301900069675705	1.298916725006269e-08	7.886418691136018	-0.16529078251876728	
YYS(ph)DS(ph)DDELTVEQR	ddPTM_K562_Methotrexat_30min_R1	1	YYSDSDDELTVEQR	14	0	Q8NFC6	Q8NFC6	BOD1L1	Biorientation of chromosomes in cell division protein 1-like 1	2	Y(0.005)Y(0.005)S(0.991)DS(0.995)DDELT(0.004)VEQR	89.26	0.030467	9381500.0	1761.1	1263.2	2116.7	1835.7	1626.6	1549.2	1504.4	1875.1	1604.5	1640.3	True	False	1683.6841526815983	1471.9223292712443	1672.4335964169998	1674.7670311081138	1840.5264109294933	1848.560974517981	1841.7999954888617	1809.1516701832027	1529.907145211821	1343.2257751680197	1.25346325525282	1.0958115578798555	1.2450874807012995	1.2468246679517616	1.3702286279454903	1.3762101715824733	1.3711767816981304	1.3468708713223596	1.1389798896767374	1.0	10.391486104199682	-7.14356312084664	2.59681513493554	1.293824207091153	1.1755315976523546	0.036720892027645724	0.12131797329158872	0.5669814892237109	7.41495019454585	0.03380800091158444	0.06844592342455924	7.185167207657862e-08	7.14356312084664	-0.11829260943879838	
YYS(ph)DSDDELTVEQR	ddPTM_K562_Methotrexat_30min_R1	1	YYSDSDDELTVEQR	14	0	Q8NFC6	Q8NFC6	BOD1L1	Biorientation of chromosomes in cell division protein 1-like 1	1	YYS(0.805)DS(0.192)DDELT(0.002)VEQR	98.368	0.0049683999999999996	9000300.0	1006.6	1224.5	1706.0	1316.8	949.54	1090.1	1068.5	1291.6	1015.9	1105.0	True	False	962.3510692688075	1426.8278120587718	1347.9339138694202	1201.3581884638916	1074.4211534698084	1300.746397057868	1308.1383243684186	1246.1736959141508	968.6710307389783	904.8737923310746	1.0635196614432425	1.5768252149098878	1.489637477948128	1.3276527606894593	1.1873712804765373	1.4374893030186822	1.4456583177179674	1.3771795652340009	1.0705040182935939	1.0	9.821572775478549	-9.811975719057546	4.336131544210044	1.0085083914487774	1.3735963714690063	0.4664134428415132	0.14063281246025822	0.17670829576818992	6.5024367325193095	0.13051795859911075	0.03548088529258625	1.5417866501913026e-10	9.811975719057546	0.3650879800202289	
YYTVFDRDNNR	ddPTM_K562_Methotrexat_30min_R1	1	YYTVFDRDNNR	11	1	H7C1V0;H7C469;A0A1B0GW44;A0A1B0GVP3;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;P07339	H7C1V0	CTSD	Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain	0		123.96	0.006208399999999999	16627000.0	1623.7	1219.8	1640.6	1712.8	1254.6	1124.0	1207.1	1558.8	1609.8	1822.9	False	True	1552.3240921634833	1421.3512169451112	1296.2604801255388	1562.6414832935534	1419.6018905398632	1341.1970922787311	1477.8229025223375	1503.976120463749	1534.960749368644	1492.7551457378422	1.0399053700104295	0.9521663489175666	0.8683677854513913	1.0468170133295154	0.9509944712588342	0.8984709221121467	0.9899968569807717	1.007516955984339	1.0282736279632385	1.0	10.543761826558056	-8.991847048806479	24.76813021442785	1.0104885694283672	0.9573741279908603	0.17407523433840277	0.05167796647239155	292.206716963539	887702.0770314165	0.02193044223458104	0.01475894357102431	1.0189501819425324e-09	8.991847048806479	-0.053114441437506876	
YYVTIIDAPGHR	ddPTM_K562_Methotrexat_30min_R1	2	YYVTIIDAPGHR	12	0	A0A087WVQ9;Q5VTE0;P68104;A6PW80;Q5JR01;A0A087WV01	A0A087WVQ9	EEF1A1;EEF1A1P5	Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha	0	;	134.75	6.3275e-05	200699000.0	10034.3	8326.9	9504.2	8573.5	8827.1	7957.5	8840.4	11223.9	11380.6	11070.5	False	True	9593.204186731564	9702.778691900508	7509.398302577803	7821.874566217471	9988.018370783053	9495.174254277581	10823.084738181153	10829.149075232917	10851.518390026582	9065.525174661689	1.0582072193175027	1.0702941644263428	0.8283467485774251	0.8628153819571044	1.1017583844673169	1.0473937329981466	1.1938728898389557	1.1945418347632624	1.1970093492605125	1.0	13.146174883774753	-8.190261302445082	1.909542165751908	1.1542370713115586	0.9594482926850421	0.3975831412645735	0.09592426571751819	0.3374322065589401	2.424782232176541	0.04000535003880218	0.03851603508268519	6.452658743774968e-09	8.190261302445082	-0.19478877862651656